BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780808|ref|YP_003065221.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Candidatus Liberibacter asiaticus str. psy62] (626 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254780808|ref|YP_003065221.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Candidatus Liberibacter asiaticus str. psy62] gi|254040485|gb|ACT57281.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Candidatus Liberibacter asiaticus str. psy62] Length = 626 Score = 1286 bits (3328), Expect = 0.0, Method: Compositional matrix adjust. Identities = 626/626 (100%), Positives = 626/626 (100%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR Sbjct: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI Sbjct: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN Sbjct: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC Sbjct: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL Sbjct: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI Sbjct: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV Sbjct: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS Sbjct: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES Sbjct: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG Sbjct: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Query: 601 MTPAALNLLLIYIKKNTVKLNEIVLV 626 MTPAALNLLLIYIKKNTVKLNEIVLV Sbjct: 601 MTPAALNLLLIYIKKNTVKLNEIVLV 626 >gi|315122031|ref|YP_004062520.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495433|gb|ADR52032.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 625 Score = 1098 bits (2840), Expect = 0.0, Method: Compositional matrix adjust. Identities = 527/625 (84%), Positives = 579/625 (92%), Gaps = 1/625 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M+ YDVIVIGGGHAGCEAA+ AA++GASTALITHK STIGSMSCNPAIGGLGKGHLVR Sbjct: 1 MLKSCYDVIVIGGGHAGCEAASAAARIGASTALITHKISTIGSMSCNPAIGGLGKGHLVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDALDGLMGRVADA+GIQFR+LN+KKGPAVRGPRTQADRELYRLAMQREILSQEN+DVI Sbjct: 61 EIDALDGLMGRVADASGIQFRILNIKKGPAVRGPRTQADRELYRLAMQREILSQENIDVI 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 QGEV FN + + ISSI+MQD +MIRCST+VLTTGTFLRG+I+IGK KIPAGRMGD PSN Sbjct: 121 QGEVTDFNVKDDKISSILMQDGTMIRCSTLVLTTGTFLRGIIYIGKSKIPAGRMGDPPSN 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 LFNSFM+FDFD GRLKTGTPARLDG+TIIW+KTEKQ+AD+ L+PFSFMTDKITN+QI C Sbjct: 181 CLFNSFMQFDFDMGRLKTGTPARLDGRTIIWEKTEKQYADKNLVPFSFMTDKITNKQIAC 240 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 GITRTN ETHRII ENIKHS+IYSGDIKS GPRYCPSIEDKI+RFGERNGHQ+FLEPEGL Sbjct: 241 GITRTNFETHRIITENIKHSSIYSGDIKSRGPRYCPSIEDKIIRFGERNGHQVFLEPEGL 300 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T VVYPNGISTALPEEIQHQFIRTIPGLEKV II PGYAIEYDY+NP+EL+PTLETKKI Sbjct: 301 CTHVVYPNGISTALPEEIQHQFIRTIPGLEKVEIISPGYAIEYDYVNPEELYPTLETKKI 360 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 +GLFLAGQINGTTGYEEAAAQGLVAGINSARKS LDC+CFSRTDSYIGVMIDDLTSKGV Sbjct: 361 TGLFLAGQINGTTGYEEAAAQGLVAGINSARKSKGLDCVCFSRTDSYIGVMIDDLTSKGV 420 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 +EPYRMFTSRAEYR+SLR +NADNRLTPIGM+LGCIG+ R++RF YIQEYN LR LLKS Sbjct: 421 VEPYRMFTSRAEYRLSLRTENADNRLTPIGMELGCIGKERRERFKNYIQEYNLLRDLLKS 480 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 +++TSKN++STSI KQDGK R AY+ LSYPDFSI+NLFSI PDA KFSS+V+ERL+IES Sbjct: 481 VIITSKNIASTSIPLKQDGKIRNAYDLLSYPDFSIKNLFSIYPDACKFSSIVLERLKIES 540 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 SY YT RQM+EAKEIKFEEKRLIP DFDYSSLPALSNELKEKLS +KPFNLLQASKIEG Sbjct: 541 SYDVYTKRQMVEAKEIKFEEKRLIPNDFDYSSLPALSNELKEKLSCVKPFNLLQASKIEG 600 Query: 601 MTPAALNLLLIYIKKNT-VKLNEIV 624 MTPAALNLLLIYIKKNT +K N++V Sbjct: 601 MTPAALNLLLIYIKKNTSIKENKMV 625 >gi|15967090|ref|NP_387443.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Sinorhizobium meliloti 1021] gi|307302552|ref|ZP_07582309.1| glucose inhibited division protein A [Sinorhizobium meliloti BL225C] gi|21263672|sp|Q92KW2|MNMG_RHIME RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|15076363|emb|CAC47916.1| Probable glucose inhibited division protein A [Sinorhizobium meliloti 1021] gi|306903222|gb|EFN33812.1| glucose inhibited division protein A [Sinorhizobium meliloti BL225C] Length = 623 Score = 804 bits (2076), Expect = 0.0, Method: Compositional matrix adjust. Identities = 382/618 (61%), Positives = 473/618 (76%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAGCEAA+ +A+LGA T LITHK TIG MSCNPAIGGLGKGHLVREIDAL Sbjct: 4 YDVIVIGGGHAGCEAASASARLGARTVLITHKMDTIGVMSCNPAIGGLGKGHLVREIDAL 63 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGLMGRVADAAGIQFR+LN +KGPAVRGPRTQADR+LYR AMQREI ENL VI+G+ Sbjct: 64 DGLMGRVADAAGIQFRLLNRRKGPAVRGPRTQADRKLYREAMQREISGIENLSVIEGDAF 123 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 TE ++ M+D + R + VVLTTGTFL+G+IHIG+ KIPAGR+G+ PS L + Sbjct: 124 DLLTEDGVVCGTAMKDGRIFRAAAVVLTTGTFLKGLIHIGQRKIPAGRVGEEPSLGLSGT 183 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 +F GRLKTGTPARLDG+TI WD+ +Q DE +PFSFMTD I NRQI+CG+TRT Sbjct: 184 LRRFGLQLGRLKTGTPARLDGRTIDWDRVGRQGPDENPVPFSFMTDAIINRQIDCGVTRT 243 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 TH+II +NI SA+YSG I+ GPRYCPSIEDKIVRFGER+GHQIFLEPEGL+ D V Sbjct: 244 TDATHKIIADNIHQSAMYSGQIEGVGPRYCPSIEDKIVRFGERDGHQIFLEPEGLDDDTV 303 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YPNGIST+LPE++Q FIRTIPGLE+V I++PGYAIEYD+++P+EL +L +K+ GLFL Sbjct: 304 YPNGISTSLPEDVQDAFIRTIPGLEQVKILQPGYAIEYDHVDPRELELSLGVRKMPGLFL 363 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEA AQGLVAG+N+A +S FSRTDSYIGVMIDDLTS+G+ EPYR Sbjct: 364 AGQINGTTGYEEAGAQGLVAGLNAALRSIGRAPHFFSRTDSYIGVMIDDLTSRGITEPYR 423 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAEYR+SLR DNAD RLTP G+ LGC+G+ R++RF + Y R+LL+SL +T Sbjct: 424 MFTSRAEYRLSLRADNADMRLTPAGITLGCVGDARRQRFEAWKHSYETGRTLLQSLSVTP 483 Query: 486 KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAY 545 + QDG+ RTA++ LSYPD SI L + P+ + + V+E L+I+++YA Y Sbjct: 484 SEGKRFGLKLNQDGQRRTAFDILSYPDQSIAALKPLWPELQTIPAGVVEALEIDAAYAVY 543 Query: 546 TGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAA 605 RQ + ++ +E IP DFDY LP LSNELK+KL+ KP NL QA K++G+TPAA Sbjct: 544 MERQATDIAGVRRDENTSIPDDFDYEVLPGLSNELKQKLAQHKPRNLAQAMKVDGVTPAA 603 Query: 606 LNLLLIYIKKNTVKLNEI 623 ++L+L ++++ + + Sbjct: 604 ISLILSWLRRQVRQAQRV 621 >gi|150398396|ref|YP_001328863.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Sinorhizobium medicae WSM419] gi|166200617|sp|A6UEE8|MNMG_SINMW RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|150029911|gb|ABR62028.1| glucose inhibited division protein A [Sinorhizobium medicae WSM419] Length = 623 Score = 803 bits (2075), Expect = 0.0, Method: Compositional matrix adjust. Identities = 384/610 (62%), Positives = 474/610 (77%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAGCEAAA +A+LGA T LITHK TIG MSCNPAIGGLGKGHLVREIDAL Sbjct: 4 YDVIVIGGGHAGCEAAAASARLGARTLLITHKKDTIGVMSCNPAIGGLGKGHLVREIDAL 63 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGLMGRVADAAGIQFR+LN +KGPAVRGPRTQADR+LYR AMQREI S ENLDV +G+ Sbjct: 64 DGLMGRVADAAGIQFRLLNRRKGPAVRGPRTQADRKLYREAMQREIASIENLDVAEGDAF 123 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 TE ++ VM+D R ++VVLTTGTFLRG+IHIG K+PAGR+G+ PS L + Sbjct: 124 DLQTEDGVVCGAVMKDGRSFRAASVVLTTGTFLRGLIHIGDRKMPAGRVGEQPSVGLSET 183 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 +F GRLKTGTPARLDG+TI W + +Q DE +PFSFMTD I NRQI+CG+TRT Sbjct: 184 LARFGLQLGRLKTGTPARLDGRTIDWGRVGRQGPDENPVPFSFMTDAIVNRQIDCGVTRT 243 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 TH+II +NI SA+YSG I+ GPRYCPSIEDKIVRFGER+GHQIFLEPEGL+ D V Sbjct: 244 TDATHKIIADNIHRSAMYSGQIEGVGPRYCPSIEDKIVRFGERDGHQIFLEPEGLDDDTV 303 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YPNGIST+LPE++Q FIRTIPGLE+V I++PGYAIEYD+++P+EL P+L +++ GLFL Sbjct: 304 YPNGISTSLPEDVQDAFIRTIPGLEQVTILQPGYAIEYDHVDPRELEPSLGVRRMPGLFL 363 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEA AQGLVAG+N+A ++ + FSRTDSYIGVMIDDLTS+G+ EPYR Sbjct: 364 AGQINGTTGYEEAGAQGLVAGLNAALRAAERAPFFFSRTDSYIGVMIDDLTSRGIAEPYR 423 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAEYR+SLR DNAD RLTP+G++LGC+G R RF ++ Y R+LL+SL +T Sbjct: 424 MFTSRAEYRLSLRADNADMRLTPVGIELGCVGNARLTRFQQWKSAYEAGRTLLQSLSVTP 483 Query: 486 KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAY 545 + QDG+ RTA+E LSYPD SI+ L + P+ + ++ V L+I+++YA Y Sbjct: 484 NEGKRFGLKLNQDGQRRTAFEILSYPDQSIEGLRPLWPELQAIATDVAAALEIDAAYAVY 543 Query: 546 TGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAA 605 RQ + ++ EE IP+ FDY SLP LSNELK+KL+ KP NL QA K++G+TPAA Sbjct: 544 MERQAADIIGVQREESTAIPEAFDYESLPGLSNELKQKLAQQKPRNLSQAMKVDGVTPAA 603 Query: 606 LNLLLIYIKK 615 ++L+L ++++ Sbjct: 604 ISLILSWLRR 613 >gi|307316117|ref|ZP_07595561.1| glucose inhibited division protein A [Sinorhizobium meliloti AK83] gi|306897957|gb|EFN28699.1| glucose inhibited division protein A [Sinorhizobium meliloti AK83] Length = 623 Score = 803 bits (2074), Expect = 0.0, Method: Compositional matrix adjust. Identities = 381/618 (61%), Positives = 473/618 (76%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAGCEAA+ +A+LGA T L+THK TIG MSCNPAIGGLGKGHLVREIDAL Sbjct: 4 YDVIVIGGGHAGCEAASASARLGARTVLMTHKMDTIGVMSCNPAIGGLGKGHLVREIDAL 63 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGLMGRVADAAGIQFR+LN +KGPAVRGPRTQADR+LYR AMQREI ENL VI+G+ Sbjct: 64 DGLMGRVADAAGIQFRLLNRRKGPAVRGPRTQADRKLYREAMQREISGIENLSVIEGDAF 123 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 TE ++ M+D + R + VVLTTGTFL+G+IHIG+ KIPAGR+G+ PS L + Sbjct: 124 DLLTEDGVVCGTAMKDGRIFRAAAVVLTTGTFLKGLIHIGQRKIPAGRVGEEPSLGLSGT 183 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 +F GRLKTGTPARLDG+TI WD+ +Q DE +PFSFMTD I NRQI+CG+TRT Sbjct: 184 LRRFGLQLGRLKTGTPARLDGRTIDWDRVGRQGPDENPVPFSFMTDAIINRQIDCGVTRT 243 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 TH+II +NI SA+YSG I+ GPRYCPSIEDKIVRFGER+GHQIFLEPEGL+ D V Sbjct: 244 TDATHKIIADNIHQSAMYSGQIEGVGPRYCPSIEDKIVRFGERDGHQIFLEPEGLDDDTV 303 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YPNGIST+LPE++Q FIRTIPGLE+V I++PGYAIEYD+++P+EL +L +K+ GLFL Sbjct: 304 YPNGISTSLPEDVQDAFIRTIPGLEQVKILQPGYAIEYDHVDPRELELSLGVRKMPGLFL 363 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEA AQGLVAG+N+A +S FSRTDSYIGVMIDDLTS+G+ EPYR Sbjct: 364 AGQINGTTGYEEAGAQGLVAGLNAALRSIGRTPHFFSRTDSYIGVMIDDLTSRGITEPYR 423 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAEYR+SLR DNAD RLTP G+ LGC+G+ R++RF + Y R+LL+SL +T Sbjct: 424 MFTSRAEYRLSLRADNADMRLTPAGITLGCVGDARRQRFEAWKHSYETGRTLLQSLSVTP 483 Query: 486 KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAY 545 + QDG+ RTA++ LSYPD SI L + P+ + + V+E L+I+++YA Y Sbjct: 484 SEGKRFGLKLNQDGQRRTAFDILSYPDQSIAALKPLWPELQTIPAGVVEALEIDAAYAVY 543 Query: 546 TGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAA 605 RQ + ++ +E IP DFDY LP LSNELK+KL+ KP NL QA K++G+TPAA Sbjct: 544 MERQATDIAGVRRDENTSIPDDFDYEVLPGLSNELKQKLAQHKPRNLAQAMKVDGVTPAA 603 Query: 606 LNLLLIYIKKNTVKLNEI 623 ++L+L ++++ + + Sbjct: 604 ISLILSWLRRQVRQAQRV 621 >gi|227823855|ref|YP_002827828.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Sinorhizobium fredii NGR234] gi|227342857|gb|ACP27075.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Sinorhizobium fredii NGR234] Length = 627 Score = 801 bits (2068), Expect = 0.0, Method: Compositional matrix adjust. Identities = 383/612 (62%), Positives = 473/612 (77%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIGGGHAGCEAA+ AA+LGA TALITHK TIG MSCNPAIGGLGKGHLVREIDA Sbjct: 3 SYDVIVIGGGHAGCEAASAAARLGARTALITHKKETIGVMSCNPAIGGLGKGHLVREIDA 62 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRVADAAGIQFR+LN +KGPAVRGPRTQADR LYR AMQREI + ENL VI+G+ Sbjct: 63 LDGLMGRVADAAGIQFRLLNRRKGPAVRGPRTQADRRLYREAMQREIDAIENLLVIEGDA 122 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 TE ++ ++M++ + R + VVLTTGTFL+G+IHIG KIPAGR+G+ PS L Sbjct: 123 FDLLTEGETVAGVIMKNGQVFRAAAVVLTTGTFLKGLIHIGDRKIPAGRVGEEPSVGLSE 182 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + +F GRLKTGTPARLDG+TI WD+ +Q DE +PFSFMTD I NRQI+CG+TR Sbjct: 183 TLARFGLKLGRLKTGTPARLDGRTIHWDRVGRQGPDEEPVPFSFMTDTIVNRQIDCGVTR 242 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T TH++I +NI SA+YSG I+ GPRYCPSIEDKIVRFGER+GHQIFLEPEGL+ D Sbjct: 243 TTDATHKLIADNIHRSAMYSGQIEGVGPRYCPSIEDKIVRFGERDGHQIFLEPEGLDDDT 302 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LPEE+Q FIRT+PGLE V+I++PGYAIEYD+++P+EL +L +K GL+ Sbjct: 303 IYPNGISTSLPEEVQEAFIRTVPGLESVSILQPGYAIEYDHVDPRELQLSLAVRKSPGLY 362 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEA AQGLVAG+N+A + + FSRTDSYIGVMIDDLTS+G+ EPY Sbjct: 363 LAGQINGTTGYEEAGAQGLVAGLNAALAAMGREPFVFSRTDSYIGVMIDDLTSRGITEPY 422 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+SLR DNAD RLTP G++LGC+GE R+ RF + + Y+ +LLKSL +T Sbjct: 423 RMFTSRAEYRLSLRADNADMRLTPTGIELGCVGEARRTRFGSWKRAYDDGHTLLKSLSIT 482 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + + +DG+ RTA++ L+YPD +I+ L + P V E LQI+++YA Sbjct: 483 PNEGARYGLKLNRDGQRRTAFDLLAYPDQTIEGLRPLWPQLDAIDPRVSEALQIDAAYAV 542 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + I+ EE IP DFDYS LP LSNELK+KL+ +P NL QA K++GMTPA Sbjct: 543 YMERQAADIAGIRREESAAIPDDFDYSVLPGLSNELKQKLAQQRPRNLAQAMKVDGMTPA 602 Query: 605 ALNLLLIYIKKN 616 A++LLL ++++ Sbjct: 603 AVSLLLSWLRRQ 614 >gi|222087928|ref|YP_002546466.1| glucose inhibited division protein A [Agrobacterium radiobacter K84] gi|221725376|gb|ACM28532.1| glucose inhibited division protein A [Agrobacterium radiobacter K84] Length = 626 Score = 781 bits (2016), Expect = 0.0, Method: Compositional matrix adjust. Identities = 386/618 (62%), Positives = 480/618 (77%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M+ YDVIV+GGGHAG EAAA AA+LGA TAL+THK TIG MSCNPAIGGLGKGHLVR Sbjct: 1 MLETIYDVIVVGGGHAGSEAAAAAARLGAKTALVTHKRDTIGVMSCNPAIGGLGKGHLVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDALDGLMGRVADA GIQFR+LN KKGPAVRGPRTQADR+LYRLAMQ EI + ENLD+I Sbjct: 61 EIDALDGLMGRVADAGGIQFRMLNRKKGPAVRGPRTQADRKLYRLAMQAEIGAIENLDII 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 +G+ +S++V+++ IRC VVLTTGTFLRG+IHIG KIPAGR+G+ PS Sbjct: 121 EGDAFDLTISDGRVSAVVLKNGRTIRCGAVVLTTGTFLRGLIHIGDRKIPAGRVGEEPSV 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 L + ++ RLKTGTPARLDG TI W+ +Q AD+ +PFSFMTD+I N QIEC Sbjct: 181 GLSGTLERYGLALARLKTGTPARLDGSTIDWNAVGRQGADDEPVPFSFMTDRIVNPQIEC 240 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 G+TRT TH+II +N+ SA+YSG I+ GPRYCPSIEDKIV+FGER+GHQIFLEPEGL Sbjct: 241 GVTRTTPATHKIIADNLMRSAMYSGQIEGVGPRYCPSIEDKIVKFGERDGHQIFLEPEGL 300 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + VYPNGIST+LPEE+Q FIRTIPGLE+V I++ GYAIEYD+++P+EL P+LE KI Sbjct: 301 DDTTVYPNGISTSLPEEVQDAFIRTIPGLERVRILQCGYAIEYDHVDPRELKPSLEVMKI 360 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLFLAGQINGTTGYEEA AQGL+AG+N+AR S D I SRT+SYIGVMIDDLTS+GV Sbjct: 361 PGLFLAGQINGTTGYEEAGAQGLIAGLNAARLSGGGDAIQLSRTESYIGVMIDDLTSRGV 420 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+SLR DNAD RLTP+G+ +GC+G R RF Y+++ + R+ LK+ Sbjct: 421 AEPYRMFTSRAEYRLSLRADNADVRLTPLGLTIGCVGSARADRFGDYMEKLEWARTQLKA 480 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 L +T + +DG+ RTAY+ LSYP+ SI +L + P+ R V+E ++IE+ Sbjct: 481 LSVTPSEAEKAGLHLNKDGQRRTAYDLLSYPEHSIDSLSGLWPELRSIDRRVVEAVEIEA 540 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 +YA Y RQ + +++ EE+RLIP+DFD+S L LSNELK+KL+ +P N+ QAS+I+G Sbjct: 541 AYAVYMDRQTSDIVQVRREEERLIPQDFDFSILSGLSNELKQKLAKAQPKNIAQASRIDG 600 Query: 601 MTPAALNLLLIYIKKNTV 618 MTPAA++LLL +++K TV Sbjct: 601 MTPAAISLLLAHLRKLTV 618 >gi|209551501|ref|YP_002283418.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537257|gb|ACI57192.1| glucose inhibited division protein A [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 625 Score = 771 bits (1992), Expect = 0.0, Method: Compositional matrix adjust. Identities = 372/616 (60%), Positives = 463/616 (75%), Gaps = 1/616 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M ++ YDVIVIGGGHAG EAA+ AA+LGA TAL+TH+ TIG MSCNPAIGGLGKGHLVR Sbjct: 1 MTDKVYDVIVIGGGHAGSEAASAAARLGAKTALVTHRRDTIGVMSCNPAIGGLGKGHLVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDA+DGLMGRVAD AGIQFR+LN KKG AVRGPRTQADR+LYRLAM I + LD++ Sbjct: 61 EIDAMDGLMGRVADVAGIQFRMLNKKKGAAVRGPRTQADRKLYRLAMLAAIEATAGLDIV 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 +G+ ++ ++MQD ++ + VVLTTGTFLRG+IHIG K PAGR+G++PS Sbjct: 121 EGDAFDLKVVDGRVAGVIMQDGRVLGAAAVVLTTGTFLRGLIHIGSEKTPAGRVGEAPSI 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 L + + GRLKTGTPARLDGKTI W +Q ADE L PFS MTD IT QIEC Sbjct: 181 GLSATLARLGLRLGRLKTGTPARLDGKTIDWQAVGRQGADEELTPFSLMTDAITTPQIEC 240 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 G+TRT THRII++NI SA+YSG I+ GPRYCPSIEDK+V+FGER+GHQ+FLEPEGL Sbjct: 241 GVTRTTEATHRIIVDNIMRSAMYSGQIEGVGPRYCPSIEDKLVKFGERDGHQVFLEPEGL 300 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + D VYPNGIST+LP E+Q +FI+TIPGLE+ II+PGYAIEYD+++P+EL P+LE K++ Sbjct: 301 DDDTVYPNGISTSLPAEVQAEFIKTIPGLERARIIQPGYAIEYDHVDPRELTPSLEVKRL 360 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLFLAGQINGTTGYEEAAAQGL AGIN+A +S+ D FSRT+SYIGVMIDDLTS+GV Sbjct: 361 KGLFLAGQINGTTGYEEAAAQGLAAGINAALRSSDSDPFHFSRTNSYIGVMIDDLTSRGV 420 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLTP+ M+LGC+ R++RF +Y E R LL+S Sbjct: 421 TEPYRMFTSRAEYRLMLRADNADMRLTPLAMQLGCVSGERERRFTRYQTEIEAGRVLLQS 480 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA-RKFSSLVIERLQIE 539 L +T ++ DG+ RTAY+ LSYP++ L + PD + V E L+IE Sbjct: 481 LAVTPNEARRVGLNINLDGQRRTAYDLLSYPNYDFDVLRKVWPDELGAVAGKVAEALEIE 540 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + Y+ Y RQ + + +E R IP DFDY++L LSNELK KL +PFN+ QA+ +E Sbjct: 541 AGYSVYLDRQAAAIADQQRDEDRHIPADFDYTALSGLSNELKAKLGAARPFNIAQAAIVE 600 Query: 600 GMTPAALNLLLIYIKK 615 GMTPAA+ LLL+++++ Sbjct: 601 GMTPAAVALLLVHLRR 616 >gi|222150245|ref|YP_002551202.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Agrobacterium vitis S4] gi|254811504|sp|B9JV52|MNMG_AGRVS RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|221737227|gb|ACM38190.1| glucose inhibited division protein A [Agrobacterium vitis S4] Length = 621 Score = 771 bits (1991), Expect = 0.0, Method: Compositional matrix adjust. Identities = 370/616 (60%), Positives = 466/616 (75%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R +DVIVIGGGHAG EAA +A+LGA T L+TH+ TIG MSCNPAIGGLGKGHLVREID Sbjct: 3 RRFDVIVIGGGHAGSEAAYASARLGARTCLVTHRRDTIGVMSCNPAIGGLGKGHLVREID 62 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL GLMGR ADAAGIQFR+LN KKGPAVRGPRTQADR+LYR A+Q + + L++I+G+ Sbjct: 63 ALGGLMGRCADAAGIQFRLLNRKKGPAVRGPRTQADRKLYRQAVQNVLFNHPQLEIIEGD 122 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V N E + +++ D + ++V+LT+GTFLRG+IHIG+ KIPAGR+G++PS L Sbjct: 123 VFDLNVENGTVKGVILADGQSLPSASVILTSGTFLRGLIHIGQTKIPAGRVGEAPSLGLS 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + + GRLKTGTPARLDG+TI W + E Q ADE+ +PFSFMTD+ITNRQIECGIT Sbjct: 183 ATLGRLGLRLGRLKTGTPARLDGRTIDWAQLEMQAADEQPVPFSFMTDRITNRQIECGIT 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 RT TH II +NI SA+YSG I+ GPRYCPSIEDKI RFG+R+GHQ+FLEPEGL+ Sbjct: 243 RTTAATHTIIRDNIHLSAMYSGQIEGVGPRYCPSIEDKISRFGDRDGHQVFLEPEGLDDH 302 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNGIST+LPE +Q +F+RT+PGLE V I++ YAIEYD+I+P+EL +LE K++SGL Sbjct: 303 TVYPNGISTSLPESVQKEFMRTLPGLENVTILQSAYAIEYDHIDPRELSASLELKRLSGL 362 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 +LAGQINGTTGYEEAAAQGLVAG+N+AR + D + FSR SYIGVMIDDL S GV EP Sbjct: 363 YLAGQINGTTGYEEAAAQGLVAGLNAARTAGGQDVVHFSRAQSYIGVMIDDLISHGVTEP 422 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R+SLR DNAD RLTPIG+ LGCI ++KRF Y + + ++L++ L Sbjct: 423 YRMFTSRAEFRLSLRADNADMRLTPIGIALGCIASDQEKRFKDYRHQIDDTINMLETRKL 482 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 T ++ I QDG+ RTA E L+YPD SI +L + P+ S V E ++I ++YA Sbjct: 483 TPNEAAAVGIPVNQDGRRRTALELLAYPDISIADLSRLWPELDALDSKVAEAVEIHATYA 542 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y RQ + K +E RLIPKDFDY+SL LSNELK+KL +P NL QA+K+EGMTP Sbjct: 543 VYMDRQNADIAATKRDEDRLIPKDFDYASLSGLSNELKQKLEKTRPENLSQAAKVEGMTP 602 Query: 604 AALNLLLIYIKKNTVK 619 AA++LL+ ++ K ++ Sbjct: 603 AAISLLIAFLNKGMLR 618 >gi|190893978|ref|YP_001980520.1| glucose inhibited division protein A [Rhizobium etli CIAT 652] gi|190699257|gb|ACE93342.1| glucose inhibited division protein A [Rhizobium etli CIAT 652] Length = 625 Score = 771 bits (1990), Expect = 0.0, Method: Compositional matrix adjust. Identities = 384/618 (62%), Positives = 472/618 (76%), Gaps = 1/618 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 MI YDVIVIGGGHAG EAA+ AA+LGA TAL+TH+ TIG MSCNPAIGGLGKGHLVR Sbjct: 1 MIGNVYDVIVIGGGHAGSEAASAAARLGARTALVTHRRDTIGVMSCNPAIGGLGKGHLVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDA+DGLMGR+ADAAGIQFR+LN KKG AVRGPRTQADR+LYRLAM I + LD++ Sbjct: 61 EIDAMDGLMGRIADAAGIQFRMLNRKKGAAVRGPRTQADRKLYRLAMLAAIEATPGLDIV 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 +G+ + N ++ +VM+D +++ VVLTTGTFLRG+IHIG K PAGR+G+ PS Sbjct: 121 EGDAFDLDVVDNRVAGVVMKDGRLLKAPAVVLTTGTFLRGLIHIGSDKTPAGRVGEPPSL 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 L + + GRLKTGTPARLDGK+I W +Q ADE L+PFSFMTD IT RQIEC Sbjct: 181 GLSATLARLGLRLGRLKTGTPARLDGKSIDWQSVGRQGADEDLVPFSFMTDSITTRQIEC 240 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 G+TRT THRII++NIK SA+YSG I+ GPRYCPSIEDK+V+FGER+GHQ+FLEPEGL Sbjct: 241 GVTRTTEATHRIIIDNIKRSAMYSGQIEGVGPRYCPSIEDKLVKFGERDGHQVFLEPEGL 300 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + D VYPNGIST+LP E+Q FIRTIPGLE I++PGYAIEYD+++P+EL P+LE K++ Sbjct: 301 DDDTVYPNGISTSLPAEVQADFIRTIPGLEAARILQPGYAIEYDHVDPRELTPSLEVKRL 360 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 SGLFLAGQINGTTGYEEAAAQGL AG+N+A +S D FSRT+SYIGVMIDDLTS+GV Sbjct: 361 SGLFLAGQINGTTGYEEAAAQGLAAGLNAALRSTDSDPFHFSRTNSYIGVMIDDLTSRGV 420 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR++LR DNAD RLTP+GM+LGC+G R++RF Y E + RSLL S Sbjct: 421 TEPYRMFTSRAEYRLTLRADNADVRLTPLGMRLGCVGSAREQRFTAYQVEVDAGRSLLMS 480 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA-RKFSSLVIERLQIE 539 L LT + DG+ RTAY+ LSYPD++ L + PDA V E L+IE Sbjct: 481 LTLTPNEARRAGLHINLDGQRRTAYDLLSYPDYNFAALRQVWPDALAAVRPKVAEALEIE 540 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + Y+ Y RQ + + +E+R IP DFDYS+L LSNELK KLS +PFN+ QA+ +E Sbjct: 541 AGYSVYLDRQAAAIADQQRDEERRIPADFDYSALSGLSNELKAKLSTARPFNVAQAAIVE 600 Query: 600 GMTPAALNLLLIYIKKNT 617 GMTPAA+ LLL+++++ + Sbjct: 601 GMTPAAIALLLVHLRRQS 618 >gi|327191201|gb|EGE58244.1| glucose inhibited division protein A [Rhizobium etli CNPAF512] Length = 625 Score = 768 bits (1983), Expect = 0.0, Method: Compositional matrix adjust. Identities = 382/618 (61%), Positives = 470/618 (76%), Gaps = 1/618 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 MI YDVIVIGGGHAG EAA+ AA+LGA TAL+TH+ TIG MSCNPAIGGLGKGHLVR Sbjct: 1 MIGNVYDVIVIGGGHAGSEAASAAARLGARTALVTHRRETIGVMSCNPAIGGLGKGHLVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDA+DGLMGR+ADAAGIQFR+LN KKG AVRGPRTQADR+LYRLAM I + LD++ Sbjct: 61 EIDAMDGLMGRIADAAGIQFRMLNRKKGAAVRGPRTQADRKLYRLAMLAAIEATPGLDIV 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 +G+ + N ++ ++M+D ++ VVLTTGTFLRG+IHIG K PAGR+G+ PS Sbjct: 121 EGDAFDLDVVDNRVAGVIMKDGRLLSAPAVVLTTGTFLRGLIHIGSDKTPAGRVGEPPSL 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 L + + GRLKTGTPARLDGK+I W +Q ADE L+PFSFMTD IT RQIEC Sbjct: 181 GLSATLARLGLRLGRLKTGTPARLDGKSIDWQSVGRQGADEHLVPFSFMTDSITTRQIEC 240 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 G+TRT THRII++NIK SA+YSG I+ GPRYCPSIEDK+V+FGER+GHQ+FLEPEGL Sbjct: 241 GVTRTTEATHRIIIDNIKRSAMYSGQIEGVGPRYCPSIEDKLVKFGERDGHQVFLEPEGL 300 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + D VYPNGIST+LP E+Q FI+TIPGLE I++PGYAIEYD+++P+EL P+LE K++ Sbjct: 301 DDDTVYPNGISTSLPAEVQADFIKTIPGLEAARILQPGYAIEYDHVDPRELTPSLEVKRL 360 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 SGLFLAGQINGTTGYEEAAAQGL AG+N+A +S D FSRT+SYIGVMIDDLTS+GV Sbjct: 361 SGLFLAGQINGTTGYEEAAAQGLAAGLNAALRSTDSDPFHFSRTNSYIGVMIDDLTSRGV 420 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR++LR DNAD RLTP+GM+LGC+G R++RF Y E + RSLL S Sbjct: 421 TEPYRMFTSRAEYRLTLRADNADVRLTPLGMRLGCVGSAREQRFTAYQVEVDAGRSLLMS 480 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA-RKFSSLVIERLQIE 539 L LT + DG+ RTAY+ LSYPD+ L + PDA V E L+IE Sbjct: 481 LTLTPNEARRAGLHINLDGQRRTAYDLLSYPDYDFAALRQVWPDALAAVRPKVAEALEIE 540 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + Y+ Y RQ + + +E+R IP DFDYS+L LSNELK KLS +PFN+ QA+ +E Sbjct: 541 AGYSVYLDRQAAAIADQQRDEERRIPADFDYSALSGLSNELKAKLSTARPFNVAQAAIVE 600 Query: 600 GMTPAALNLLLIYIKKNT 617 GMTPAA+ LLL+++++ + Sbjct: 601 GMTPAAIALLLVHLRRQS 618 >gi|307943443|ref|ZP_07658787.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Roseibium sp. TrichSKD4] gi|307773073|gb|EFO32290.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Roseibium sp. TrichSKD4] Length = 625 Score = 762 bits (1967), Expect = 0.0, Method: Compositional matrix adjust. Identities = 363/614 (59%), Positives = 463/614 (75%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 ++ S+DVIVIGGGHAGCEAAA +A++GA TAL+THK TIG MSCNPAIGGLGKGHLVRE Sbjct: 4 VDLSFDVIVIGGGHAGCEAAAASARVGAKTALVTHKFETIGVMSCNPAIGGLGKGHLVRE 63 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDALDGLMGRVAD AGIQFR+LN +KGPAVRGPRTQADR+LYR AMQ EI + ENL V++ Sbjct: 64 IDALDGLMGRVADKAGIQFRMLNRRKGPAVRGPRTQADRKLYRDAMQAEIAALENLSVVE 123 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G+ F ++ + +++ D + +VVLT+GTFLRG+IHIG KIPAGR G++P+ Sbjct: 124 GQANRFLFDEGKVVGLLLSDGRKVEAKSVVLTSGTFLRGLIHIGDQKIPAGRSGEAPALG 183 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L S + FD GRLKTGTPARLDG+TI W+K + Q ADE +PFS +T+KIT QIEC Sbjct: 184 LSESLEEIGFDLGRLKTGTPARLDGRTIKWEKLDAQLADENPVPFSTLTEKITTPQIECH 243 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 ITRT ETHRII EN+ SA+YSG+IK GPRYCPSIEDKIVRFG+R+GHQIFLEPEGL+ Sbjct: 244 ITRTTPETHRIIRENLSRSAMYSGEIKGRGPRYCPSIEDKIVRFGDRDGHQIFLEPEGLD 303 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 VYPNGIST+LPE+ Q F+RTIPGLE+V + +PGYAIEYD+++P+EL PTLE + S Sbjct: 304 DHTVYPNGISTSLPEDAQLAFLRTIPGLEEVEVFQPGYAIEYDHVDPRELNPTLEARICS 363 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLFLAGQINGTTGYEEA AQGLVAG+N+ K+ ++ R++ YIGVMIDDL ++G+ Sbjct: 364 GLFLAGQINGTTGYEEAGAQGLVAGLNAGLKAQGMEPFTVDRSEGYIGVMIDDLVTRGIT 423 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+SLR DNAD RLTP+GMK+GCI E R+ F ++ + LLK L Sbjct: 424 EPYRMFTSRAEYRLSLRADNADQRLTPLGMKIGCISEARRVAFETKMKSLTEVADLLKRL 483 Query: 482 VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +T + QDG R+A++ LSYPD S + L S+ P+ ++E++ ++ Sbjct: 484 TITPAEAQRKGLPVNQDGIRRSAFDLLSYPDMSFEQLASVWPELEDIDPSIVEQVSSDAL 543 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ + +K +E IP DFD+++L LSNE+K+KL ++P L QAS+++G+ Sbjct: 544 YAVYLERQAADIAALKKDEALAIPADFDFNALTGLSNEVKQKLEAVRPATLGQASRMDGI 603 Query: 602 TPAALNLLLIYIKK 615 TPAAL L+L ++K+ Sbjct: 604 TPAALTLILSHLKR 617 >gi|325294201|ref|YP_004280065.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Agrobacterium sp. H13-3] gi|325062054|gb|ADY65745.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Agrobacterium sp. H13-3] Length = 627 Score = 759 bits (1961), Expect = 0.0, Method: Compositional matrix adjust. Identities = 387/621 (62%), Positives = 477/621 (76%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +++S+DVIVIGGGHAG EAAA AA+ GA TAL+THK TIG MSCNPAIGGLGKGHLVRE Sbjct: 1 MHQSFDVIVIGGGHAGSEAAAAAARHGAKTALVTHKRETIGVMSCNPAIGGLGKGHLVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDALDGLMGRVADAAGIQFR+LN KKGPAVRGPRTQADR LYR AMQREI + ENL +I+ Sbjct: 61 IDALDGLMGRVADAAGIQFRMLNRKKGPAVRGPRTQADRRLYREAMQREINAIENLSIIE 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G+ + + +++M + S I C VVLT+GTFLRG+IHIG KIPAGR+G+ PS Sbjct: 121 GDAFDIEMADDKVCAVIMANGSRIPCGAVVLTSGTFLRGLIHIGSEKIPAGRVGEKPSLG 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L + + GRLKTGTPARLDG++I W+ ++Q ADE +PFSFMTD+I N QIECG Sbjct: 181 LSETLGRLGLAMGRLKTGTPARLDGRSIDWEGVDRQAADEDPVPFSFMTDRIVNPQIECG 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +TRT HRII +NI SA+YSG I+ GPRYCPSIEDKI RFGER+GHQIFLEPEGL+ Sbjct: 241 VTRTTPAGHRIIQDNIHLSAMYSGQIEGVGPRYCPSIEDKITRFGERDGHQIFLEPEGLD 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 +YPNGIST+LP +Q QFIRTIPGLE+VNII+PGYAIEYDY++P+EL P+LE +KI Sbjct: 301 DHTIYPNGISTSLPASVQEQFIRTIPGLEQVNIIQPGYAIEYDYVDPRELKPSLECRKIP 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLFLAGQINGTTGYEEA AQGLVAG+N++ + D I FSRT+SYIGVMIDDLTSKGV Sbjct: 361 GLFLAGQINGTTGYEEAGAQGLVAGLNASLYAGNADPIHFSRTESYIGVMIDDLTSKGVS 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+SLR DNAD RLTPIG G IG RQKRFA +I + + R L+KS+ Sbjct: 421 EPYRMFTSRAEYRLSLRVDNADLRLTPIGQMAGIIGHDRQKRFADFISDMDRGRELMKSI 480 Query: 482 VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 ++ + + QDG+ R+ YE L+YPD +++ L + P+ R ++ V E L+IE+S Sbjct: 481 SISPSQAAKQGLKLNQDGQRRSVYEMLAYPDITMETLTTHWPELRALNTKVAEVLEIEAS 540 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ + +IK +E R IP DFD+ SL LSNELK+KL +P N+ QA++++GM Sbjct: 541 YAVYMQRQNADIVDIKRDEDRKIPNDFDFQSLSGLSNELKQKLEKARPENIAQAARVDGM 600 Query: 602 TPAALNLLLIYIKKNTVKLNE 622 TPAA++LLL ++K + +E Sbjct: 601 TPAAISLLLALLRKGSASGSE 621 >gi|15890076|ref|NP_355757.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Agrobacterium tumefaciens str. C58] gi|22095724|sp|Q8UBM0|MNMG_AGRT5 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|15158061|gb|AAK88542.1| glucose inhibited division protein A [Agrobacterium tumefaciens str. C58] Length = 627 Score = 755 bits (1949), Expect = 0.0, Method: Compositional matrix adjust. Identities = 378/621 (60%), Positives = 478/621 (76%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +++S+DV+VIGGGHAG EAAA AA+ GA TAL+THK IG MSCNPAIGGLGKGHLVRE Sbjct: 1 MHQSFDVVVIGGGHAGSEAAAAAARHGAKTALVTHKREAIGVMSCNPAIGGLGKGHLVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDALDGLMGRVADAAGIQFR+LN KKGPAVRGPRTQADR LYR AMQREI + +NL +I+ Sbjct: 61 IDALDGLMGRVADAAGIQFRMLNRKKGPAVRGPRTQADRRLYREAMQREIDAMDNLTIIE 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G+ + + +++++M++ S I C VVLT+GTFLRG+IHIG KIPAGR+G+ PS Sbjct: 121 GDAFDIEMDNDRVAAVIMKNGSRIPCGAVVLTSGTFLRGLIHIGSEKIPAGRVGEMPSLG 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L ++ + GRLKTGTPARLDG+TI W+ ++Q ADE +PFSFMTD I N QIECG Sbjct: 181 LSDTLSRLGLAMGRLKTGTPARLDGRTIDWNAVDRQAADEDPVPFSFMTDHILNPQIECG 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +TRT +H+II +NI SA+YSG I+ GPRYCPSIEDKI RFGER+GHQIFLEPEGL+ Sbjct: 241 VTRTTPASHKIIQDNIHLSAMYSGQIEGVGPRYCPSIEDKITRFGERDGHQIFLEPEGLD 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 +YPNGIST+LP +Q QFIRTIPGLE+V I++PGYAIEYDY++P+EL P+LE +KI Sbjct: 301 DYTIYPNGISTSLPAFVQEQFIRTIPGLEQVTILQPGYAIEYDYVDPRELKPSLECRKIP 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLFLAGQINGTTGYEEA AQGLVAG+N++ + D + FSRT+SYIGVMIDDLTSKGV Sbjct: 361 GLFLAGQINGTTGYEEAGAQGLVAGLNASLYAGSADPLHFSRTESYIGVMIDDLTSKGVS 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+SLR DNAD RLTP+ K G +G RQ+RF ++ + + +R+L+K L Sbjct: 421 EPYRMFTSRAEYRLSLRVDNADLRLTPVAQKAGILGRERQQRFTDFLSDLDSVRALMKEL 480 Query: 482 VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 ++ + + QDG+ R+ YE L+YPD ++Q L P+ + ++ V E LQIE+S Sbjct: 481 SISPSQAAKQGLKLNQDGQRRSVYELLAYPDMTLQALAEHWPELNRLNAKVAEVLQIEAS 540 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ + +IK +E R IP DFD+ SL LSNELK+KL +P N+ QA++++GM Sbjct: 541 YAVYMQRQSADIVDIKRDEDRKIPDDFDFQSLSGLSNELKQKLEKARPENIAQAARVDGM 600 Query: 602 TPAALNLLLIYIKKNTVKLNE 622 TPAA++LLL ++K T +E Sbjct: 601 TPAAISLLLALLRKGTATRSE 621 >gi|86359700|ref|YP_471592.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rhizobium etli CFN 42] gi|123510386|sp|Q2K2S1|MNMG_RHIEC RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|86283802|gb|ABC92865.1| glucose inhibited division protein A [Rhizobium etli CFN 42] Length = 632 Score = 748 bits (1932), Expect = 0.0, Method: Compositional matrix adjust. Identities = 371/617 (60%), Positives = 463/617 (75%), Gaps = 1/617 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M N Y+VIVIGGGHAG EAA+ AA+LGA TAL+TH+ TIG MSCNPAIGGLGKGHLVR Sbjct: 1 MTNSGYNVIVIGGGHAGTEAASAAARLGAKTALVTHRRDTIGVMSCNPAIGGLGKGHLVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDA+DGLMGRVAD AGIQFR+LN KKG AVRGPRTQADR+LYRLAM I + LD+I Sbjct: 61 EIDAMDGLMGRVADVAGIQFRMLNRKKGAAVRGPRTQADRKLYRLAMLAAIEATPGLDII 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 +G+ + ++ ++M+D ++ VVLTTGTFLRG+IHIG K PAGR+G++PS Sbjct: 121 EGDAFDLDVLDGRVAGVIMKDGRRLQAPAVVLTTGTFLRGLIHIGSEKTPAGRVGEAPSI 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 L + + GRLKTGTPARLDGKTI W +Q ADE L+PFSFMTD IT RQ+EC Sbjct: 181 GLSATLARLGLRLGRLKTGTPARLDGKTIDWQSVGRQGADEELVPFSFMTDSITTRQVEC 240 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 G+TRT THRII++NIKHSA+YSG I+ GPRYCPSIEDK+V+FGER+GHQ+FLEPEGL Sbjct: 241 GVTRTTEATHRIIVDNIKHSAMYSGQIEGVGPRYCPSIEDKLVKFGERDGHQVFLEPEGL 300 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + D VYPNGIST+LP EIQ FI+TIPGLE I++PGYAIEYD+++P+EL P+LE K++ Sbjct: 301 DDDTVYPNGISTSLPAEIQAAFIKTIPGLESARILQPGYAIEYDHVDPRELTPSLEVKRL 360 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLFLAGQINGTTGYEEAAAQGL AG+N+A S+ + FSRT SYIGVMIDDLTS+GV Sbjct: 361 RGLFLAGQINGTTGYEEAAAQGLAAGLNAALLSSDSEPFHFSRTSSYIGVMIDDLTSRGV 420 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR++LR DNAD RLTP+ M LGC+G R +RF Y E + R+ L + Sbjct: 421 TEPYRMFTSRAEYRLTLRADNADMRLTPLAMALGCVGAERAERFTAYQAEIDAGRAQLMA 480 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA-RKFSSLVIERLQIE 539 L +T ++ DG+ R+AY+FLSYP + L + P+ + V E L+IE Sbjct: 481 LTVTPNEARRAGLNINLDGQRRSAYDFLSYPTYDFAALRKVWPEELGRLRPKVAEALEIE 540 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + Y+ Y RQ + + +E+R IP DF+Y +L LSNELK KLS +PFN+ QA+ +E Sbjct: 541 AGYSVYLDRQAAAIADQQRDEERRIPADFNYDALSGLSNELKAKLSAARPFNVAQAAIVE 600 Query: 600 GMTPAALNLLLIYIKKN 616 GMTPAA+ LLL+++++ Sbjct: 601 GMTPAAVALLLVHLRRQ 617 >gi|116254462|ref|YP_770300.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rhizobium leguminosarum bv. viciae 3841] gi|205375709|sp|Q1MA19|MNMG_RHIL3 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|115259110|emb|CAK10221.1| putative glucose inhibited division protein A [Rhizobium leguminosarum bv. viciae 3841] Length = 625 Score = 744 bits (1921), Expect = 0.0, Method: Compositional matrix adjust. Identities = 372/616 (60%), Positives = 465/616 (75%), Gaps = 1/616 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M + +DVIVIGGGHAG EAA+ AA+LGA TALITH+ TIG MSCNPAIGGLGKGHLVR Sbjct: 1 MTDNVFDVIVIGGGHAGSEAASAAARLGAKTALITHRRDTIGVMSCNPAIGGLGKGHLVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDA+DGLMGRVAD AGIQFR+LN KKG AVRGPRTQADR+LYRLAM I + +LD+I Sbjct: 61 EIDAMDGLMGRVADVAGIQFRMLNKKKGAAVRGPRTQADRKLYRLAMLAAIEATPDLDII 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 +G+ + ++ ++M+D+ ++ VVLTTGTFLRG+IHIG K PAGR+G++PS Sbjct: 121 EGDAFDLDVVDGCVAGVIMKDDRTLKAPAVVLTTGTFLRGLIHIGSEKTPAGRVGEAPSI 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 L + + GRLKTGTPARLDGKTI W +Q ADE LIPFSFMTD IT RQIEC Sbjct: 181 GLSATLARLGLRLGRLKTGTPARLDGKTIDWQSIGRQGADEELIPFSFMTDTITTRQIEC 240 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 G+TRT THRII++NI SA+YSG I+ GPRYCPSIEDK+V+FGER+GHQ+FLEPEGL Sbjct: 241 GVTRTTEATHRIIVDNIMRSAMYSGQIEGVGPRYCPSIEDKLVKFGERDGHQVFLEPEGL 300 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + D VYPNGIST+LP E+Q FI+TIPGLE I++PGYAIEYD+++P+EL P+LE K++ Sbjct: 301 DDDTVYPNGISTSLPAEVQADFIKTIPGLEAARILQPGYAIEYDHVDPRELTPSLEVKRL 360 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLFLAGQINGTTGYEEAAAQGL AG+N+A +S+ D FSRT SYIGVMIDDLTS+GV Sbjct: 361 RGLFLAGQINGTTGYEEAAAQGLAAGLNAALRSSDSDPFHFSRTSSYIGVMIDDLTSRGV 420 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+SLR DNAD RLTP+ M++GC+ + R +RF Y E R+LL+S Sbjct: 421 TEPYRMFTSRAEYRLSLRADNADMRLTPLAMRVGCVSDARVRRFTSYQAEIETCRALLQS 480 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIE 539 L +T ++ DG+ RTAY+ LSYP++S L + P+ V E L+IE Sbjct: 481 LAVTPNEARRAGLNINLDGQRRTAYDLLSYPNYSFAALSDVWPEKLGMIGPKVAEALEIE 540 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + Y+ Y RQ + + +E+R IP DF+Y +L LSNELK KL +PFN+ QA+ +E Sbjct: 541 AGYSVYLDRQASAIADQQRDEERQIPLDFNYDALAGLSNELKVKLGTARPFNIAQAAIVE 600 Query: 600 GMTPAALNLLLIYIKK 615 GMTPAA+ LLL+++++ Sbjct: 601 GMTPAAIALLLVHLRR 616 >gi|254505046|ref|ZP_05117197.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Labrenzia alexandrii DFL-11] gi|222441117|gb|EEE47796.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Labrenzia alexandrii DFL-11] Length = 643 Score = 744 bits (1920), Expect = 0.0, Method: Compositional matrix adjust. Identities = 357/618 (57%), Positives = 459/618 (74%), Gaps = 3/618 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 S+DV+VIGGGHAGCEAAA +A++GA TAL+THK TIG MSCNPAIGGLGKGHLVREIDA Sbjct: 23 SFDVVVIGGGHAGCEAAAASARMGAKTALVTHKFETIGVMSCNPAIGGLGKGHLVREIDA 82 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRVAD GIQFR+LN +KGPAVRGPR QADR+LYR AMQREI + ENL V++GE Sbjct: 83 LDGLMGRVADQGGIQFRMLNRRKGPAVRGPRAQADRKLYREAMQREIAAVENLTVVEGEA 142 Query: 125 AGF---NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 + ++ IV+ +I C VVLT+GTFLRG+IHIG KIPAGR G++P+ Sbjct: 143 EQLRFSGADARSVTGIVLASGQVIDCGAVVLTSGTFLRGLIHIGDRKIPAGRSGEAPAMG 202 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L +S + FD GRLKTGTPARLDG+TI WD+ E+Q DE IPFS +TDKI+ QI C Sbjct: 203 LSHSLEQIGFDLGRLKTGTPARLDGRTIHWDRLEEQPGDEEPIPFSTLTDKISIPQIPCH 262 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 ITRT ETH+II +N+ SA+YSG+IK GPRYCPSIEDKIVRFG+R+GHQIFLEPEGL+ Sbjct: 263 ITRTTPETHQIIRDNLDRSAMYSGEIKGRGPRYCPSIEDKIVRFGDRDGHQIFLEPEGLD 322 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 VYPNGIST+LPE+ Q F+RTIPGLE V +I+PGYAIEYD+++P+EL TLE K+ + Sbjct: 323 DHTVYPNGISTSLPEDAQIAFLRTIPGLENVEVIQPGYAIEYDHVDPRELRATLEAKRCA 382 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GL+LAGQINGTTGYEEA AQGLVAG+N+A K R+ YIGVMIDDL ++G+ Sbjct: 383 GLYLAGQINGTTGYEEAGAQGLVAGLNAALKVADKAPFIVDRSQGYIGVMIDDLITRGIT 442 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+SLR DNAD RLTP+G+++GC+ + R+ + +++ R LL+SL Sbjct: 443 EPYRMFTSRAEYRLSLRADNADQRLTPLGIEIGCVSDDRRAAYEAKMEKILAARDLLQSL 502 Query: 482 VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +T + + QDG R+A++ LSYP + L + P+ V+E++ ++ Sbjct: 503 TVTPNEATKKGLPVNQDGVRRSAFDLLSYPKVTFDGLQMVWPELGHMDPAVVEQVTTDAL 562 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ + + +K +E IP DFDY ++ LSNE+K+KL+ ++P L QAS+++GM Sbjct: 563 YAVYLERQTADIEALKRDEALGIPDDFDYEAIVGLSNEVKQKLADIRPATLGQASRMDGM 622 Query: 602 TPAALNLLLIYIKKNTVK 619 TPAAL L+L ++K+ + + Sbjct: 623 TPAALTLILSHLKRQSQR 640 >gi|306842824|ref|ZP_07475464.1| glucose-inhibited division protein A [Brucella sp. BO2] gi|306287018|gb|EFM58529.1| glucose-inhibited division protein A [Brucella sp. BO2] Length = 642 Score = 736 bits (1900), Expect = 0.0, Method: Compositional matrix adjust. Identities = 356/611 (58%), Positives = 457/611 (74%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIVIGGGHAGCEAA+ AA+ GA TAL+TH+ TIG MSCNPAIGGLGKGHLVREIDA Sbjct: 14 AFDVIVIGGGHAGCEAASAAARAGARTALVTHRFDTIGVMSCNPAIGGLGKGHLVREIDA 73 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRVAD AGIQFR+LN +KGPAVRGPRTQADR+LYRLAMQ+ I QENL V++G Sbjct: 74 LDGLMGRVADRAGIQFRLLNRRKGPAVRGPRTQADRKLYRLAMQQMITEQENLTVVEGGA 133 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 A + IS + + D +++C VVLTTGTFL G+IHIG+ + PAGRMG+ P+ L Sbjct: 134 ADLVCDGERISGVTLGDGRVLKCGAVVLTTGTFLNGLIHIGEKRFPAGRMGEKPALGLSE 193 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F F GRLKTGTP RLDG+TI W + Q ADE IPFS MTD+IT QIECGITR Sbjct: 194 RLLSFGFTLGRLKTGTPPRLDGRTIDWQSLDMQSADEEPIPFSLMTDRITTPQIECGITR 253 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETH II N+ SA+YSG+I+ GPRYCPS+EDKIV+FG+R+GHQIFLEPEGL+ D Sbjct: 254 TTPETHDIIRANLHRSAMYSGNIEGIGPRYCPSVEDKIVKFGDRDGHQIFLEPEGLDDDT 313 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LPE++Q + ++TIPGLEK +++PGYAIEYD+I+P+EL +LET+K+ GLF Sbjct: 314 VYPNGISTSLPEDVQLEILKTIPGLEKAVLLQPGYAIEYDFIDPRELKRSLETRKVCGLF 373 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEA AQGL+AG+N+AR++ + + RT++YIGVM+DDLTS+GV EPY Sbjct: 374 LAGQINGTTGYEEAGAQGLLAGLNAARRAAGSEPVILQRTEAYIGVMVDDLTSRGVSEPY 433 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAE+R+SLR DNAD RLTP+ ++G + E R+KR+ + R + +SL +T Sbjct: 434 RMFTSRAEFRLSLRADNADQRLTPLADEVGILSEERRKRYLAREAALSHARMVTQSLSIT 493 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + + QDG R+AY+ LSYPD ++ L +I P+ + E L+IE+ YA Sbjct: 494 PNLAGNYDLRLNQDGVRRSAYDLLSYPDINLDRLIAIWPELASIDPVTREALEIEAQYAV 553 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + ++ EE+ LIP D+ ++ LSNELK+KL KP + +A +++GMTPA Sbjct: 554 YMERQQSDIAVMEREERLLIPLGLDFDAISGLSNELKQKLKQRKPETIAEAQRVDGMTPA 613 Query: 605 ALNLLLIYIKK 615 A+ LL+ I+K Sbjct: 614 AVALLIAQIRK 624 >gi|114705861|ref|ZP_01438764.1| glucose-inhibited division protein A [Fulvimarina pelagi HTCC2506] gi|114538707|gb|EAU41828.1| glucose-inhibited division protein A [Fulvimarina pelagi HTCC2506] Length = 631 Score = 736 bits (1899), Expect = 0.0, Method: Compositional matrix adjust. Identities = 346/616 (56%), Positives = 452/616 (73%), Gaps = 1/616 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 S DV+VIGGGHAGCEAA+ +A+ GA+T L+TH+ TIG+MSCNPAIGG+GKGHLVREIDA Sbjct: 13 SADVVVIGGGHAGCEAASASARFGATTVLVTHRFDTIGAMSCNPAIGGIGKGHLVREIDA 72 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLMG VADAAGIQFR+LN KGPAV GPRTQADR+LY AMQ +I + NL V++G+V Sbjct: 73 LGGLMGEVADAAGIQFRMLNRSKGPAVHGPRTQADRKLYGEAMQAKIAAHANLSVVEGDV 132 Query: 125 AGFN-TEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 + T + + ++ D + C VVLTTGTFL G+IHIG +IPAGRMG+ PS L Sbjct: 133 FDLDLTPEGEVQGVIFADGRRLACGAVVLTTGTFLSGLIHIGTQRIPAGRMGEDPSVGLS 192 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + + GRLKTGTPARLDG+TI W E Q AD+ +PFS++TD+ITNRQIECG+T Sbjct: 193 GTLKRLGLSLGRLKTGTPARLDGRTIDWASIESQAADDEPVPFSYLTDRITNRQIECGVT 252 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 RT +THRII +NI+ SA+YSG I+ GPRYCPSIEDKIV+FG+R+GHQ+FLEPEGL+ Sbjct: 253 RTTPDTHRIIRDNIRKSALYSGQIEGVGPRYCPSIEDKIVKFGDRDGHQVFLEPEGLDDH 312 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNG+ST++PE++Q +F+R+IPGLE V I+R GYAIEYD+I+P+EL L +K GL Sbjct: 313 TVYPNGLSTSMPEDVQLEFLRSIPGLENVEILRAGYAIEYDHIDPRELDRHLAVRKARGL 372 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 +LAGQINGTTGYEEAAAQGL+AG+N+A + K + R D+Y+GVM+DDLT GV EP Sbjct: 373 YLAGQINGTTGYEEAAAQGLLAGLNAACLAGKAAPVAVGRADAYLGVMVDDLTRTGVTEP 432 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R+SLR DNAD RLTP+ ++LG G R +RF K + R+LL+ L Sbjct: 433 YRMFTSRAEFRLSLRADNADRRLTPLAVELGIAGAERTERFLKSEEGLAKGRALLEERTL 492 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 T + +S +DG+ R+A++ LS + L +I P+ K + ER +IE++Y Sbjct: 493 TPNEAAKHGLSLNKDGRRRSAWQLLSQAGIDLGRLSAIWPELGKIAGKTRERTEIEAAYD 552 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y RQ + ++ +E R+IP + D SLP LSNEL++KL+ +P L +A +I+GMTP Sbjct: 553 VYLDRQRKDQDRLRRDENRVIPTELDLKSLPGLSNELRQKLASRRPQTLAEAERIDGMTP 612 Query: 604 AALNLLLIYIKKNTVK 619 AAL L+L+ I++N VK Sbjct: 613 AALALILVAIRRNEVK 628 >gi|153008195|ref|YP_001369410.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ochrobactrum anthropi ATCC 49188] gi|166222712|sp|A6WX77|MNMG_OCHA4 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|151560083|gb|ABS13581.1| glucose inhibited division protein A [Ochrobactrum anthropi ATCC 49188] Length = 636 Score = 736 bits (1899), Expect = 0.0, Method: Compositional matrix adjust. Identities = 361/610 (59%), Positives = 450/610 (73%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAGCEAA+ AA+ GA TAL+TH+ TIG MSCNPAIGGLGKGHLVREIDAL Sbjct: 9 FDVIVIGGGHAGCEAASAAARAGARTALVTHRFDTIGVMSCNPAIGGLGKGHLVREIDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGLMGRVAD AGIQFR+LN +KGPAVRGPRTQADR+LYRLAMQ+ I +Q+NL V++G Sbjct: 69 DGLMGRVADEAGIQFRLLNRRKGPAVRGPRTQADRKLYRLAMQKMIAAQDNLFVVEGGAH 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E I+ +V+ D + C VVLTTGTFL G+IHIG+ KIPAGRMG+ P+ L Sbjct: 129 DLREEHGRITGVVLSDGRTLSCGAVVLTTGTFLNGLIHIGEKKIPAGRMGEKPALGLSER 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 F F GRLKTGTP RLDG+TI W + Q ADE +PFS MTD+IT QI+CGITRT Sbjct: 189 LTSFGFALGRLKTGTPPRLDGRTIDWQSLDMQSADEEPVPFSLMTDRITIPQIDCGITRT 248 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 ETH +I N+ SA+YSG I+ GPRYCPS+EDKIV+FG+R+GHQIFLEPEGL+ D V Sbjct: 249 TPETHAVIRANLHRSAMYSGSIEGIGPRYCPSVEDKIVKFGDRDGHQIFLEPEGLDDDTV 308 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YPNGIST+LPE++Q ++TIPGLE +++PGYAIEYD+I+P+EL +LET+K++GLFL Sbjct: 309 YPNGISTSLPEDVQLDILKTIPGLETAAMLQPGYAIEYDFIDPRELKRSLETRKVTGLFL 368 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEA AQGL+AGIN+AR+++ D + RT++YIGVM+DDLTS+GV EPYR Sbjct: 369 AGQINGTTGYEEAGAQGLLAGINAARRASGGDPVIIQRTEAYIGVMVDDLTSRGVSEPYR 428 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAE+R+SLR DNAD RLTP+ KLG +G R++RF + RSL +SL +T Sbjct: 429 MFTSRAEFRLSLRADNADQRLTPLADKLGILGHARKERFEARETALDEARSLTQSLTITP 488 Query: 486 KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAY 545 S + QDG R+AY+ LSYP+ + L SI P+ E L+IE+ YA Y Sbjct: 489 NLASRYDLRLNQDGVRRSAYDLLSYPEIDLDRLKSIWPELGAVDPATREALEIEAQYAVY 548 Query: 546 TGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAA 605 RQ + ++ EE+ LIP D + LSNELK KL +P + +A +++GMTPAA Sbjct: 549 MDRQKSDIAVMEREEQLLIPAGLDIDGISGLSNELKHKLKQRRPETIAEAQRVDGMTPAA 608 Query: 606 LNLLLIYIKK 615 L LL+ IKK Sbjct: 609 LALLIAQIKK 618 >gi|254694683|ref|ZP_05156511.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Brucella abortus bv. 3 str. Tulya] gi|261215011|ref|ZP_05929292.1| glucose-inhibited division protein A [Brucella abortus bv. 3 str. Tulya] gi|260916618|gb|EEX83479.1| glucose-inhibited division protein A [Brucella abortus bv. 3 str. Tulya] Length = 636 Score = 734 bits (1896), Expect = 0.0, Method: Compositional matrix adjust. Identities = 355/611 (58%), Positives = 455/611 (74%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIVIGGGHAGCEAA+ AA+ GA TAL+TH+ TIG MSCNPAIGGLGKGHLVREIDA Sbjct: 8 AFDVIVIGGGHAGCEAASAAARAGARTALVTHRFDTIGVMSCNPAIGGLGKGHLVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRVAD AGIQFR+LN +KGPAVRGPRTQADR+LYRLAMQ+ I QENL V++G Sbjct: 68 LDGLMGRVADRAGIQFRLLNRRKGPAVRGPRTQADRKLYRLAMQQMITEQENLTVVEGGA 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 A + IS + + D +++C VVLTTGTFL G+IHIG+ + PAGRMG+ P+ L Sbjct: 128 ADLVCDGERISGVTLADGRVLKCGAVVLTTGTFLNGLIHIGEKRFPAGRMGEKPALGLSE 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F F GRLKTGTP RLDG+TI W + Q ADE +PFS MTD+IT QIECGITR Sbjct: 188 RLLSFGFTLGRLKTGTPPRLDGRTIDWQSLDMQSADEEPVPFSLMTDRITTPQIECGITR 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETH II N+ SA+YSG I+ GPRYCPS+EDKIV+FG+R+GHQIFLEPEGL+ D Sbjct: 248 TTPETHDIIRANLHRSAMYSGSIEGIGPRYCPSVEDKIVKFGDRDGHQIFLEPEGLDDDT 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LPE++Q + ++TIPGLEK +++PGYAIEYD+I+P+EL +LET+K+ GLF Sbjct: 308 VYPNGISTSLPEDVQLEILKTIPGLEKAVLLQPGYAIEYDFIDPRELKRSLETRKVCGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEA AQGL+AG+N+AR++ + + RT++YIGVM+DDLTS+GV EPY Sbjct: 368 LAGQINGTTGYEEAGAQGLLAGLNAARRAAGSEPVILQRTEAYIGVMVDDLTSRGVSEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAE+R+SLR DNAD RLTP+ ++G + E R+KR+ + R + +SL +T Sbjct: 428 RMFTSRAEFRLSLRADNADQRLTPLADEVGILSEERRKRYLTRETALSHARMVTQSLSIT 487 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + QDG R+AY+ LSYPD ++ L +I P+ + E L+IE+ YA Sbjct: 488 PNLAGYCDLRLNQDGVRRSAYDLLSYPDINLDRLIAIWPELASIDPVTREALEIEAQYAV 547 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + ++ EE+ LIP D+ ++ LSNELK+KL KP + +A +++GMTPA Sbjct: 548 YMERQQSDIAVMEREERLLIPSGLDFDAISGLSNELKQKLKQRKPETIAEAQRVDGMTPA 607 Query: 605 ALNLLLIYIKK 615 A+ LL+ I+K Sbjct: 608 AVALLIAQIRK 618 >gi|260546166|ref|ZP_05821906.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Brucella abortus NCTC 8038] gi|260096273|gb|EEW80149.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Brucella abortus NCTC 8038] Length = 636 Score = 734 bits (1896), Expect = 0.0, Method: Compositional matrix adjust. Identities = 355/611 (58%), Positives = 455/611 (74%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIVIGGGHAGCEAA+ AA+ GA TAL+TH+ TIG MSCNPAIGGLGKGHLVREIDA Sbjct: 8 AFDVIVIGGGHAGCEAASAAARAGARTALVTHRFDTIGVMSCNPAIGGLGKGHLVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRVAD AGIQFR+LN +KGPAVRGPRTQADR+LYRLAMQ+ I QENL V++G Sbjct: 68 LDGLMGRVADRAGIQFRLLNRRKGPAVRGPRTQADRKLYRLAMQQMITEQENLTVVEGGA 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 A + IS + + D +++C VVLTTGTFL G+IHIG+ + PAGRMG+ P+ L Sbjct: 128 ADLVCDGERISGVTLADGRVLKCGAVVLTTGTFLNGLIHIGEKRFPAGRMGEKPALGLSE 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F F GRLKTGTP RLDG+TI W + Q ADE +PFS MTD+IT QIECGITR Sbjct: 188 RLLSFGFTLGRLKTGTPPRLDGRTIDWQSLDMQSADEEPVPFSLMTDRITTPQIECGITR 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETH II N+ SA+YSG I+ GPRYCPS+EDKIV+FG+R+GHQIFLEPEGL+ D Sbjct: 248 TTPETHDIIRANLHRSAMYSGSIEGIGPRYCPSVEDKIVKFGDRDGHQIFLEPEGLDDDT 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LPE++Q + ++TIPGLEK +++PGYAIEYD+I+P+EL +LET+K+ GLF Sbjct: 308 VYPNGISTSLPEDVQLEILKTIPGLEKAVLLQPGYAIEYDFIDPRELKRSLETRKVCGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEA AQGL+AG+N+AR++ + + RT++YIGVM+DDLTS+GV EPY Sbjct: 368 LAGQINGTTGYEEAGAQGLLAGLNAARRAAGSEPVILQRTEAYIGVMVDDLTSRGVSEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAE+R+SLR DNAD RLTP+ ++G + E R+KR+ + R + +SL +T Sbjct: 428 RMFTSRAEFRLSLRADNADQRLTPLADEVGILSEERRKRYLTRETALSHARMVTQSLSIT 487 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + QDG R+AY+ LSYPD ++ L +I P+ + E L+IE+ YA Sbjct: 488 PNLAGYYDLRLNQDGVRRSAYDLLSYPDINLDRLIAIWPELASIDPVTREALEIEAQYAV 547 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + ++ EE+ LIP D+ ++ LSNELK+KL KP + +A +++GMTPA Sbjct: 548 YMERQQSDIAVMEREERLLIPSGLDFDAISGLSNELKQKLKQRKPETIAEAQRVDGMTPA 607 Query: 605 ALNLLLIYIKK 615 A+ LL+ I+K Sbjct: 608 AVALLIAQIRK 618 >gi|62290905|ref|YP_222698.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Brucella abortus bv. 1 str. 9-941] gi|82700816|ref|YP_415390.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Brucella melitensis biovar Abortus 2308] gi|189025118|ref|YP_001935886.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Brucella abortus S19] gi|254707420|ref|ZP_05169248.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Brucella pinnipedialis M163/99/10] gi|254709038|ref|ZP_05170849.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Brucella pinnipedialis B2/94] gi|254713536|ref|ZP_05175347.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Brucella ceti M644/93/1] gi|254716109|ref|ZP_05177920.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Brucella ceti M13/05/1] gi|254731226|ref|ZP_05189804.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Brucella abortus bv. 4 str. 292] gi|256030563|ref|ZP_05444177.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Brucella pinnipedialis M292/94/1] gi|256258447|ref|ZP_05463983.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Brucella abortus bv. 9 str. C68] gi|260758958|ref|ZP_05871306.1| glucose-inhibited division protein A [Brucella abortus bv. 4 str. 292] gi|260884760|ref|ZP_05896374.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Brucella abortus bv. 9 str. C68] gi|261217880|ref|ZP_05932161.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Brucella ceti M13/05/1] gi|261314905|ref|ZP_05954102.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Brucella pinnipedialis M163/99/10] gi|261316537|ref|ZP_05955734.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Brucella pinnipedialis B2/94] gi|261321270|ref|ZP_05960467.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Brucella ceti M644/93/1] gi|265987611|ref|ZP_06100168.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Brucella pinnipedialis M292/94/1] gi|297247289|ref|ZP_06931007.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Brucella abortus bv. 5 str. B3196] gi|81170531|sp|Q57AJ7|MNMG_BRUAB RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|123547324|sp|Q2YR12|MNMG_BRUA2 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|62197037|gb|AAX75337.1| GidA, glucose-inhibited division protein A [Brucella abortus bv. 1 str. 9-941] gi|82616917|emb|CAJ12018.1| NAD binding site:FAD-dependent pyridine nucleotide-disulphide oxidoreductase:Glucose-inhibited division protein, A family:Glu [Brucella melitensis biovar Abortus 2308] gi|189020690|gb|ACD73412.1| glucose-inhibited division protein A [Brucella abortus S19] gi|260669276|gb|EEX56216.1| glucose-inhibited division protein A [Brucella abortus bv. 4 str. 292] gi|260874288|gb|EEX81357.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Brucella abortus bv. 9 str. C68] gi|260922969|gb|EEX89537.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Brucella ceti M13/05/1] gi|261293960|gb|EEX97456.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Brucella ceti M644/93/1] gi|261295760|gb|EEX99256.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Brucella pinnipedialis B2/94] gi|261303931|gb|EEY07428.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Brucella pinnipedialis M163/99/10] gi|264659808|gb|EEZ30069.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Brucella pinnipedialis M292/94/1] gi|297174458|gb|EFH33805.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Brucella abortus bv. 5 str. B3196] Length = 636 Score = 734 bits (1895), Expect = 0.0, Method: Compositional matrix adjust. Identities = 355/611 (58%), Positives = 455/611 (74%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIVIGGGHAGCEAA+ AA+ GA TAL+TH+ TIG MSCNPAIGGLGKGHLVREIDA Sbjct: 8 AFDVIVIGGGHAGCEAASAAARAGARTALVTHRFDTIGVMSCNPAIGGLGKGHLVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRVAD AGIQFR+LN +KGPAVRGPRTQADR+LYRLAMQ+ I QENL V++G Sbjct: 68 LDGLMGRVADRAGIQFRLLNRRKGPAVRGPRTQADRKLYRLAMQQMITEQENLTVVEGGA 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 A + IS + + D +++C VVLTTGTFL G+IHIG+ + PAGRMG+ P+ L Sbjct: 128 ADLVCDGERISGVTLADGRVLKCGAVVLTTGTFLNGLIHIGEKRFPAGRMGEKPALGLSE 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F F GRLKTGTP RLDG+TI W + Q ADE +PFS MTD+IT QIECGITR Sbjct: 188 RLLSFGFTLGRLKTGTPPRLDGRTIDWQSLDMQSADEEPVPFSLMTDRITTPQIECGITR 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETH II N+ SA+YSG I+ GPRYCPS+EDKIV+FG+R+GHQIFLEPEGL+ D Sbjct: 248 TTPETHDIIRANLHRSAMYSGSIEGIGPRYCPSVEDKIVKFGDRDGHQIFLEPEGLDDDT 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LPE++Q + ++TIPGLEK +++PGYAIEYD+I+P+EL +LET+K+ GLF Sbjct: 308 VYPNGISTSLPEDVQLEILKTIPGLEKAVLLQPGYAIEYDFIDPRELKRSLETRKVCGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEA AQGL+AG+N+AR++ + + RT++YIGVM+DDLTS+GV EPY Sbjct: 368 LAGQINGTTGYEEAGAQGLLAGLNAARRAAGSEPVILQRTEAYIGVMVDDLTSRGVSEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAE+R+SLR DNAD RLTP+ ++G + E R+KR+ + R + +SL +T Sbjct: 428 RMFTSRAEFRLSLRADNADQRLTPLADEVGILSEERRKRYLTRETALSHARMVTQSLSIT 487 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + QDG R+AY+ LSYPD ++ L +I P+ + E L+IE+ YA Sbjct: 488 PNLAGYYDLRLNQDGVRRSAYDLLSYPDINLDRLIAIWPELASIDPVTREALEIEAQYAV 547 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + ++ EE+ LIP D+ ++ LSNELK+KL KP + +A +++GMTPA Sbjct: 548 YMERQQSDIAVMEREERLLIPSGLDFDAISGLSNELKQKLKQRKPETIAEAQRVDGMTPA 607 Query: 605 ALNLLLIYIKK 615 A+ LL+ I+K Sbjct: 608 AVALLIAQIRK 618 >gi|237816410|ref|ZP_04595403.1| glucose-inhibited division protein A [Brucella abortus str. 2308 A] gi|237788477|gb|EEP62692.1| glucose-inhibited division protein A [Brucella abortus str. 2308 A] Length = 658 Score = 734 bits (1895), Expect = 0.0, Method: Compositional matrix adjust. Identities = 355/611 (58%), Positives = 455/611 (74%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIVIGGGHAGCEAA+ AA+ GA TAL+TH+ TIG MSCNPAIGGLGKGHLVREIDA Sbjct: 30 AFDVIVIGGGHAGCEAASAAARAGARTALVTHRFDTIGVMSCNPAIGGLGKGHLVREIDA 89 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRVAD AGIQFR+LN +KGPAVRGPRTQADR+LYRLAMQ+ I QENL V++G Sbjct: 90 LDGLMGRVADRAGIQFRLLNRRKGPAVRGPRTQADRKLYRLAMQQMITEQENLTVVEGGA 149 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 A + IS + + D +++C VVLTTGTFL G+IHIG+ + PAGRMG+ P+ L Sbjct: 150 ADLVCDGERISGVTLADGRVLKCGAVVLTTGTFLNGLIHIGEKRFPAGRMGEKPALGLSE 209 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F F GRLKTGTP RLDG+TI W + Q ADE +PFS MTD+IT QIECGITR Sbjct: 210 RLLSFGFTLGRLKTGTPPRLDGRTIDWQSLDMQSADEEPVPFSLMTDRITTPQIECGITR 269 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETH II N+ SA+YSG I+ GPRYCPS+EDKIV+FG+R+GHQIFLEPEGL+ D Sbjct: 270 TTPETHDIIRANLHRSAMYSGSIEGIGPRYCPSVEDKIVKFGDRDGHQIFLEPEGLDDDT 329 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LPE++Q + ++TIPGLEK +++PGYAIEYD+I+P+EL +LET+K+ GLF Sbjct: 330 VYPNGISTSLPEDVQLEILKTIPGLEKAVLLQPGYAIEYDFIDPRELKRSLETRKVCGLF 389 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEA AQGL+AG+N+AR++ + + RT++YIGVM+DDLTS+GV EPY Sbjct: 390 LAGQINGTTGYEEAGAQGLLAGLNAARRAAGSEPVILQRTEAYIGVMVDDLTSRGVSEPY 449 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAE+R+SLR DNAD RLTP+ ++G + E R+KR+ + R + +SL +T Sbjct: 450 RMFTSRAEFRLSLRADNADQRLTPLADEVGILSEERRKRYLTRETALSHARMVTQSLSIT 509 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + QDG R+AY+ LSYPD ++ L +I P+ + E L+IE+ YA Sbjct: 510 PNLAGYYDLRLNQDGVRRSAYDLLSYPDINLDRLIAIWPELASIDPVTREALEIEAQYAV 569 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + ++ EE+ LIP D+ ++ LSNELK+KL KP + +A +++GMTPA Sbjct: 570 YMERQQSDIAVMEREERLLIPSGLDFDAISGLSNELKQKLKQRKPETIAEAQRVDGMTPA 629 Query: 605 ALNLLLIYIKK 615 A+ LL+ I+K Sbjct: 630 AVALLIAQIRK 640 >gi|254690193|ref|ZP_05153447.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Brucella abortus bv. 6 str. 870] gi|260755734|ref|ZP_05868082.1| glucose-inhibited division protein A [Brucella abortus bv. 6 str. 870] gi|260675842|gb|EEX62663.1| glucose-inhibited division protein A [Brucella abortus bv. 6 str. 870] Length = 636 Score = 734 bits (1894), Expect = 0.0, Method: Compositional matrix adjust. Identities = 355/611 (58%), Positives = 455/611 (74%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIVIGGGHAGCEAA+ AA+ GA TAL+TH+ TIG MSCNPAIGGLGKGHLVREIDA Sbjct: 8 AFDVIVIGGGHAGCEAASAAARAGARTALVTHRFDTIGVMSCNPAIGGLGKGHLVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRVAD AGIQFR+LN +KGPAVRGPRTQADR+LYRLAMQ+ I QENL V++G Sbjct: 68 LDGLMGRVADRAGIQFRLLNRRKGPAVRGPRTQADRKLYRLAMQQMITEQENLTVVEGGA 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 A + IS + + D +++C VVLTTGTFL G+IHIG+ + PAGRMG+ P+ L Sbjct: 128 ADLVCDGERISGVTLADGRVLKCGAVVLTTGTFLNGLIHIGEKRFPAGRMGEKPALGLSE 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F F GRLKTGTP RLDG+TI W + Q ADE +PFS MTD+IT QIECGITR Sbjct: 188 RLLSFGFTLGRLKTGTPPRLDGRTIDWQSLDMQSADEEPVPFSLMTDRITTPQIECGITR 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETH II N+ SA+YSG I+ GPRYCPS+EDKIV+FG+R+GHQIFLEPEGL+ D Sbjct: 248 TTPETHDIIRANLHRSAMYSGSIEGIGPRYCPSVEDKIVKFGDRDGHQIFLEPEGLDDDT 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LPE++Q + ++TIPGLEK +++PGYAIEYD+I+P+EL +LET+K+ GLF Sbjct: 308 VYPNGISTSLPEDVQLEILKTIPGLEKAVLLQPGYAIEYDFIDPRELKRSLETRKVCGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEA AQGL+AG+N+AR++ + + RT++YIGVM+DDLTS+GV EPY Sbjct: 368 LAGQINGTTGYEEAGAQGLLAGLNAARRAAGSEPVILQRTEAYIGVMVDDLTSRGVSEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAE+R+SLR DNAD RLTP+ ++G + E R+KR+ + R + +SL +T Sbjct: 428 RMFTSRAEFRLSLRADNADQRLTPLADEVGILSEERRKRYLTRETALSHARMVTQSLSIT 487 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + QDG R+AY+ LSYPD ++ L +I P+ + E L+IE+ YA Sbjct: 488 PNLAGYYDLRLNQDGVRRSAYDLLSYPDINLDRLIAIWPELASIDPVTREALEIEAQYAV 547 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + ++ EE+ LIP D+ ++ LSNELK+KL KP + +A +++GMTPA Sbjct: 548 YMERQRSDIAVMEREERLLIPSGLDFDAISGLSNELKQKLKQRKPETIAEAQRVDGMTPA 607 Query: 605 ALNLLLIYIKK 615 A+ LL+ I+K Sbjct: 608 AVALLIAQIRK 618 >gi|163869378|ref|YP_001610634.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bartonella tribocorum CIP 105476] gi|189039329|sp|A9IZX9|MNMG_BART1 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|161019081|emb|CAK02639.1| glucose inhibited division protein A [Bartonella tribocorum CIP 105476] Length = 622 Score = 734 bits (1894), Expect = 0.0, Method: Compositional matrix adjust. Identities = 345/613 (56%), Positives = 449/613 (73%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 +SYDVI++GGGHAGCEAA+ +A++GA TAL+THK S +G+MSCNPAIGGLGKGHLVREID Sbjct: 2 QSYDVIIVGGGHAGCEAASASARVGAQTALLTHKISALGTMSCNPAIGGLGKGHLVREID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDGLMGR ADAAGIQFR+LN +KGPAVRGPRTQADR+LY+ A+Q+ + QENL +++ E Sbjct: 62 ALDGLMGRAADAAGIQFRLLNRRKGPAVRGPRTQADRQLYKEAIQKFLKEQENLTLVEDE 121 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + + +S ++++ I VVLTTGTFL G IHIG AGRMGD S L Sbjct: 122 VIDLIVKDHCVSGVILKKQGTIFSGAVVLTTGTFLNGFIHIGDKTWAAGRMGDPASVQLA 181 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + GRLKTGTPARL KTI WD+ KQ ADE +PFSF+T+KI QIEC IT Sbjct: 182 ERLKNYHIKLGRLKTGTPARLSKKTIDWDRLSKQQADENPVPFSFLTEKIEQPQIECAIT 241 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 RTN +TH+II +NI SA+YSG+I+ GPRYCPS+EDKIV+FGER+GHQIFLEPEGLN D Sbjct: 242 RTNAQTHQIIRDNIHRSALYSGNIEGLGPRYCPSVEDKIVKFGERDGHQIFLEPEGLNDD 301 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNG+ST+LPE++Q F++TI GLE +++PGYAIEYD++NP++L +LE + + GL Sbjct: 302 TVYPNGLSTSLPEDVQISFLKTIEGLENATVLQPGYAIEYDFVNPQQLTKSLELRSLPGL 361 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 FLAGQINGTTGYEEAAAQGL+AG+N+ARK KLD I SR+ +YIGVM+DDL S+GV EP Sbjct: 362 FLAGQINGTTGYEEAAAQGLLAGLNAARKVGKLDEIFISRSTAYIGVMVDDLVSRGVCEP 421 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R+SLR DNAD RLTP+ + G + + R + K Q + RS+ K+L L Sbjct: 422 YRMFTSRAEFRLSLRSDNADTRLTPLAQEWGIVSKVRWDCYQKKQQRLDQARSICKNLFL 481 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 T S+ + DG R+AY+FL+YP +++ L P + S +E L+IE+ YA Sbjct: 482 TPNEASAHGLHVNHDGIRRSAYDFLAYPHMTLERLSHFWPQLQAIDSKTVESLEIEAQYA 541 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y +Q + ++ +E+ IP D ++ LSNELK K+ + P ++ A KI+GMTP Sbjct: 542 VYLDKQAQDIASLQRDERLEIPSSLDIQAISGLSNELKSKIQEVSPRSIADAQKIDGMTP 601 Query: 604 AALNLLLIYIKKN 616 AAL+L++ YI++ Sbjct: 602 AALSLIITYIQRQ 614 >gi|118591440|ref|ZP_01548838.1| glucose-inhibited division protein A [Stappia aggregata IAM 12614] gi|118436112|gb|EAV42755.1| glucose-inhibited division protein A [Stappia aggregata IAM 12614] Length = 628 Score = 734 bits (1894), Expect = 0.0, Method: Compositional matrix adjust. Identities = 357/622 (57%), Positives = 461/622 (74%), Gaps = 4/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 ++ ++DV+VIGGGHAGCEAAA +A+ GA+TAL+TH+ TIG MSCNPAIGGLGKGHLVRE Sbjct: 4 LDLTFDVVVIGGGHAGCEAAAASARAGAATALVTHRFDTIGVMSCNPAIGGLGKGHLVRE 63 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDALDGLMGRVAD GIQFR+LN +KGPAVRGPR QADR+LYR AMQREI + E L V++ Sbjct: 64 IDALDGLMGRVADKGGIQFRMLNRRKGPAVRGPRAQADRKLYREAMQREIAAVEGLSVVE 123 Query: 122 GEVAGFNTEKN----IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 GE E++ +S I + D +I C +VLT+GTFLRG+IHIG KIPAGR G++ Sbjct: 124 GEAHKIRFERDGETRSVSGIELADGRVINCRAIVLTSGTFLRGLIHIGDRKIPAGRSGEA 183 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ 237 P+ L S + FD GRLKTGTPARLDG+TI WDK E+Q DE IPFS +TDKI Q Sbjct: 184 PALGLSESLEEIGFDLGRLKTGTPARLDGRTIHWDKLEEQPGDEDPIPFSTLTDKIETPQ 243 Query: 238 IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 I C ITRT ETHRII EN+ SA+YSG+IK GPRYCPSIEDKIVRFG+R+GHQIFLEP Sbjct: 244 IPCHITRTTPETHRIIRENLSRSAMYSGEIKGRGPRYCPSIEDKIVRFGDRDGHQIFLEP 303 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EGL+ VYPNGIST+LPE+ Q F++TIPGLE V +++PGYAIEYD+++P+EL PTLE Sbjct: 304 EGLDDHTVYPNGISTSLPEDAQIAFLKTIPGLEDVVVLQPGYAIEYDHVDPRELRPTLEA 363 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 K+ SGL+LAGQINGTTGYEEA AQGL+AG+N+A K+ R++ YIGVMIDDL + Sbjct: 364 KRCSGLYLAGQINGTTGYEEAGAQGLIAGLNAALKAAGKAPFVVDRSEGYIGVMIDDLIT 423 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL 477 +G+ EPYRMFTSRAEYR+SLR DNAD RLTP+G+ +GC+ + R++ F + + R L Sbjct: 424 RGITEPYRMFTSRAEYRLSLRADNADQRLTPLGLAIGCVSDTRREAFETKMAKIAAAREL 483 Query: 478 LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 L +L +T + QDG R+A++ LSYP+ + + L I P+ + + E++ Sbjct: 484 LTTLTVTPSEAQKKGLPVNQDGIRRSAFDLLSYPNVTFEGLTQIWPELKDIDPAIAEQVA 543 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 ++ YA Y RQM + + +K +E IP FDY ++ LSNE+++KL ++P L QAS+ Sbjct: 544 TDALYAVYLDRQMADIEALKRDEALSIPDGFDYEAITGLSNEVRQKLIDIRPATLGQASR 603 Query: 598 IEGMTPAALNLLLIYIKKNTVK 619 ++GMTPAAL L+L ++K+ + K Sbjct: 604 MDGMTPAALTLILSHLKRQSQK 625 >gi|256370459|ref|YP_003107970.1| glucose-inhibited division protein A [Brucella microti CCM 4915] gi|256000622|gb|ACU49021.1| glucose-inhibited division protein A [Brucella microti CCM 4915] Length = 636 Score = 733 bits (1893), Expect = 0.0, Method: Compositional matrix adjust. Identities = 355/611 (58%), Positives = 454/611 (74%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIVIGGGHAGCEAA+ AA+ GA TAL+TH+ TIG MSCNPAIGGLGKGHLVREIDA Sbjct: 8 AFDVIVIGGGHAGCEAASAAARAGARTALVTHRFDTIGVMSCNPAIGGLGKGHLVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRVAD AGIQFR+LN +KGPAVRGPRTQADR+LYRLAMQ+ I QENL V++G Sbjct: 68 LDGLMGRVADRAGIQFRLLNRRKGPAVRGPRTQADRKLYRLAMQQMITEQENLTVVEGGA 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 A + IS + + D +++C VVLTTGTFL G+IHIG+ + PAGRMG+ P+ L Sbjct: 128 ADLVCDGERISGVTLADGRVLKCGAVVLTTGTFLNGLIHIGEKRFPAGRMGEKPALGLSE 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F F GRLKTGTP RLDG+TI W + Q ADE +PFS MTD+IT QIECGITR Sbjct: 188 RLLSFGFTLGRLKTGTPPRLDGRTIDWQSLDMQSADEEPVPFSLMTDRITTPQIECGITR 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETH II N+ SA+YSG I+ GPRYCPS+EDKIV+FG+R+GHQIFLEPEGL+ D Sbjct: 248 TTPETHDIIRANLHRSAMYSGSIEGIGPRYCPSVEDKIVKFGDRDGHQIFLEPEGLDDDT 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LPE++Q + ++TIPGLEK +++PGYAIEYD+I+P+EL +LET+K+ GLF Sbjct: 308 VYPNGISTSLPEDVQLEILKTIPGLEKAVLLQPGYAIEYDFIDPRELKRSLETRKVCGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEA AQGL+AG+N+AR++ + + RT++YIGVM+DDLTS+GV EPY Sbjct: 368 LAGQINGTTGYEEAGAQGLLAGLNAARRAAGSEPVILQRTEAYIGVMVDDLTSRGVSEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAE+R+SLR DNAD RLTP+ ++G + E R+KR+ + R + +SL +T Sbjct: 428 RMFTSRAEFRLSLRADNADQRLTPLADEVGILSEERRKRYLTRETALSHARMVTQSLSIT 487 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + QDG R+AY+ LSYPD ++ L +I P+ + E L+IE+ YA Sbjct: 488 PNLAGYYDLRLNQDGVRRSAYDLLSYPDINLDRLIAIWPELASIDPVTREALEIEAQYAV 547 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + ++ EE+ LIP D+ ++ LSNELK+KL KP + +A ++GMTPA Sbjct: 548 YMERQQSDIAVMEREERLLIPSGLDFDAISGLSNELKQKLKQRKPETIAEAQHVDGMTPA 607 Query: 605 ALNLLLIYIKK 615 A+ LL+ I+K Sbjct: 608 AVALLIAQIRK 618 >gi|260567469|ref|ZP_05837939.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Brucella suis bv. 4 str. 40] gi|260156987|gb|EEW92067.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Brucella suis bv. 4 str. 40] Length = 636 Score = 733 bits (1892), Expect = 0.0, Method: Compositional matrix adjust. Identities = 354/611 (57%), Positives = 455/611 (74%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIVIGGGHAGCEAA+ AA+ GA TAL+TH+ TIG MSCNPAIGGLGKGHLVREIDA Sbjct: 8 AFDVIVIGGGHAGCEAASAAARAGARTALVTHRFDTIGVMSCNPAIGGLGKGHLVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRVAD AGIQFR+LN +KGPAVRGPRTQADR+LYRLAMQ+ I QENL V++G Sbjct: 68 LDGLMGRVADRAGIQFRLLNRRKGPAVRGPRTQADRKLYRLAMQQMITEQENLTVVEGGA 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 A + IS + + D +++C VVLTTGTFL G+IHIG+ + PAGRMG+ P+ L Sbjct: 128 ADLVCDGERISGVTLADGRVLKCGAVVLTTGTFLNGLIHIGEKRFPAGRMGEKPALGLSE 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F F GRLKTGTP RLDG+TI W + Q ADE +PFS MTD+IT QIECGITR Sbjct: 188 RLLSFGFTLGRLKTGTPPRLDGRTIDWQSLDMQSADEEPVPFSLMTDRITTPQIECGITR 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETH II N+ SA+YSG I+ GPRYCPS+EDKIV+FG+R+GHQIFLEPEGL+ D Sbjct: 248 TTPETHDIIQANLHRSAMYSGSIEGIGPRYCPSVEDKIVKFGDRDGHQIFLEPEGLDDDT 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LPE++Q + ++TIPGLEK +++PGYAIEYD+I+P+EL +LET+K+ GLF Sbjct: 308 VYPNGISTSLPEDVQLEILKTIPGLEKAVLLQPGYAIEYDFIDPRELKRSLETRKVCGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEA AQGL+AG+N+AR++ + + RT++YIGVM+DDLTS+GV EPY Sbjct: 368 LAGQINGTTGYEEAGAQGLLAGLNAARRAAGSEPVILQRTEAYIGVMVDDLTSRGVSEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAE+R+SLR DNAD RLTP+ ++G + + R+KR+ + R + +SL +T Sbjct: 428 RMFTSRAEFRLSLRADNADQRLTPLADEVGILSKERRKRYLTRETALSHARMVTQSLSIT 487 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + QDG R+AY+ LSYPD ++ L +I P+ + E L+IE+ YA Sbjct: 488 PNLAGYYDLRLNQDGVRRSAYDLLSYPDINLDRLIAIWPELASIDPVTREALEIEAQYAV 547 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + ++ EE+ LIP D+ ++ LSNELK+KL KP + +A +++GMTPA Sbjct: 548 YMERQQSDIAVMEREERLLIPSGLDFDAISGLSNELKQKLKQRKPETIAEAQRVDGMTPA 607 Query: 605 ALNLLLIYIKK 615 A+ LL+ I+K Sbjct: 608 AVALLIAQIRK 618 >gi|254696310|ref|ZP_05158138.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Brucella abortus bv. 2 str. 86/8/59] gi|260760681|ref|ZP_05873024.1| glucose-inhibited division protein A [Brucella abortus bv. 2 str. 86/8/59] gi|260671113|gb|EEX57934.1| glucose-inhibited division protein A [Brucella abortus bv. 2 str. 86/8/59] Length = 636 Score = 733 bits (1892), Expect = 0.0, Method: Compositional matrix adjust. Identities = 354/611 (57%), Positives = 455/611 (74%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIVIGGGHAGCEAA+ AA+ GA TAL+TH+ TIG MSCNPAIGGLGKGHLVREIDA Sbjct: 8 AFDVIVIGGGHAGCEAASAAARAGARTALVTHRFDTIGVMSCNPAIGGLGKGHLVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRVAD AGIQFR+LN +KGPAVRGPRTQADR+LYRLAMQ+ I QENL V++G Sbjct: 68 LDGLMGRVADRAGIQFRLLNRRKGPAVRGPRTQADRKLYRLAMQQMITEQENLTVVEGGA 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 A + IS + + D +++C VVLTTGTFL G+IHIG+ + PAGRMG+ P+ L Sbjct: 128 ADLVCDGERISGVTLADGRVLKCGAVVLTTGTFLNGLIHIGEKRFPAGRMGEKPALGLSE 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F F GRLKTGTP RLDG+TI W + Q ADE +PFS MTD+IT QIECGITR Sbjct: 188 RLLSFGFTLGRLKTGTPPRLDGRTIDWQSLDMQSADEEPVPFSLMTDRITTPQIECGITR 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETH II N+ SA+YSG I+ GPRYCPS+EDKIV+FG+R+GHQIFLEPEGL+ D Sbjct: 248 TTPETHDIIRANLHRSAMYSGSIEGIGPRYCPSVEDKIVKFGDRDGHQIFLEPEGLDDDT 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LPE++Q + ++TIPGLEK +++PGYAIEYD+I+P+EL +LET+K+ GLF Sbjct: 308 VYPNGISTSLPEDVQLEILKTIPGLEKAVLLQPGYAIEYDFIDPRELKRSLETRKVCGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEA AQGL+AG+N+AR++ + + RT++YIGVM+DDLTS+GV EPY Sbjct: 368 LAGQINGTTGYEEAGAQGLLAGLNAARRAAGSEPVILQRTEAYIGVMVDDLTSRGVSEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAE+R+SLR DNAD RLTP+ ++G + E R+KR+ + R + +SL +T Sbjct: 428 RMFTSRAEFRLSLRADNADQRLTPLADEVGILSEERRKRYLTRETALSHARMVTQSLSIT 487 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + QDG R+AY+ LSYPD ++ L +I P+ + E L+IE+ Y+ Sbjct: 488 PNLAGYYDLRLNQDGVRRSAYDLLSYPDINLDRLIAIWPELASIDPVTREALEIEAQYSV 547 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + ++ EE+ LIP D+ ++ LSNELK+KL KP + +A +++GMTPA Sbjct: 548 YMERQQSDIAVMEREERLLIPSGLDFDAISGLSNELKQKLKQRKPETIAEAQRVDGMTPA 607 Query: 605 ALNLLLIYIKK 615 A+ LL+ I+K Sbjct: 608 AVALLIAQIRK 618 >gi|23502909|ref|NP_699036.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Brucella suis 1330] gi|161619975|ref|YP_001593862.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Brucella canis ATCC 23365] gi|38257630|sp|Q8FY28|MNMG_BRUSU RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|189039331|sp|A9M9E4|MNMG_BRUC2 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|23348940|gb|AAN30951.1| glucose-inhibited division protein A [Brucella suis 1330] gi|161336786|gb|ABX63091.1| glucose-inhibited division protein A [Brucella canis ATCC 23365] Length = 636 Score = 733 bits (1891), Expect = 0.0, Method: Compositional matrix adjust. Identities = 354/611 (57%), Positives = 455/611 (74%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIVIGGGHAGCEAA+ AA+ GA TAL+TH+ TIG MSCNPAIGGLGKGHLVREIDA Sbjct: 8 AFDVIVIGGGHAGCEAASAAARAGARTALVTHRFDTIGVMSCNPAIGGLGKGHLVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRVAD AGIQFR+LN +KGPAVRGPRTQADR+LYRLAMQ+ I QENL V++G Sbjct: 68 LDGLMGRVADRAGIQFRLLNRRKGPAVRGPRTQADRKLYRLAMQQMITEQENLTVVEGGA 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 A + IS + + D +++C VVLTTGTFL G+IHIG+ + PAGRMG+ P+ L Sbjct: 128 ADLVCDGERISGVTLADGRVLKCGAVVLTTGTFLNGLIHIGEKRFPAGRMGEKPALGLSE 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F F GRLKTGTP RLDG+TI W + Q ADE +PFS MTD+IT QIECGITR Sbjct: 188 RLLSFGFTLGRLKTGTPPRLDGRTIDWQSLDMQSADEEPVPFSLMTDRITTPQIECGITR 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETH II N+ SA+YSG I+ GPRYCPS+EDKIV+FG+R+GHQIFLEPEGL+ D Sbjct: 248 TTPETHDIIRANLHRSAMYSGSIEGIGPRYCPSVEDKIVKFGDRDGHQIFLEPEGLDDDT 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LPE++Q + ++TIPGLEK +++PGYAIEYD+I+P+EL +LET+K+ GLF Sbjct: 308 VYPNGISTSLPEDVQLEILKTIPGLEKAVLLQPGYAIEYDFIDPRELKRSLETRKVCGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEA AQGL+AG+N+AR++ + + RT++YIGVM+DDLTS+GV EPY Sbjct: 368 LAGQINGTTGYEEAGAQGLLAGLNAARRAAGSEPVILQRTEAYIGVMVDDLTSRGVSEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAE+R+SLR DNAD RLTP+ ++G + + R+KR+ + R + +SL +T Sbjct: 428 RMFTSRAEFRLSLRADNADQRLTPLADEVGILSKERRKRYLTRETALSHARMVTQSLSIT 487 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + QDG R+AY+ LSYPD ++ L +I P+ + E L+IE+ YA Sbjct: 488 PNLAGYYDLRLNQDGVRRSAYDLLSYPDINLDRLIAIWPELASIDPVTREALEIEAQYAV 547 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + ++ EE+ LIP D+ ++ LSNELK+KL KP + +A +++GMTPA Sbjct: 548 YMERQQSDIAVMEREERLLIPSGLDFDAISGLSNELKQKLKQRKPETIAEAQRVDGMTPA 607 Query: 605 ALNLLLIYIKK 615 A+ LL+ I+K Sbjct: 608 AVALLIAQIRK 618 >gi|254700691|ref|ZP_05162519.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Brucella suis bv. 5 str. 513] gi|261751200|ref|ZP_05994909.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Brucella suis bv. 5 str. 513] gi|261740953|gb|EEY28879.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Brucella suis bv. 5 str. 513] Length = 636 Score = 733 bits (1891), Expect = 0.0, Method: Compositional matrix adjust. Identities = 354/611 (57%), Positives = 454/611 (74%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIVIGGGHAGCEAA+ AA+ GA TAL+TH+ TIG MSCNPAIGGLGKGHLVREIDA Sbjct: 8 AFDVIVIGGGHAGCEAASAAARAGARTALVTHRFDTIGVMSCNPAIGGLGKGHLVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRVAD AGIQFR+LN +KGPAVRGPRTQADR+LYRLAMQ+ I QENL V++G Sbjct: 68 LDGLMGRVADKAGIQFRLLNRRKGPAVRGPRTQADRKLYRLAMQQMITEQENLTVVEGGA 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 A + IS + + D +++C VVLTTGTFL G+IHIG+ + PAGRMG P+ L Sbjct: 128 ADLVCDSERISGVTLADGRVLKCGAVVLTTGTFLNGLIHIGEKRFPAGRMGGKPALGLSE 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F F GRLKTGTP RLDG+TI W + Q ADE +PFS MTD+IT QIECGITR Sbjct: 188 RLLSFGFTLGRLKTGTPPRLDGRTIDWQSLDMQSADEEPVPFSLMTDRITTPQIECGITR 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETH II N+ SA+YSG I+ GPRYCPS+EDKIV+FG+R+GHQIFLEPEGL+ D Sbjct: 248 TTPETHDIIRANLHRSAMYSGSIEGIGPRYCPSVEDKIVKFGDRDGHQIFLEPEGLDDDT 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LPE++Q + ++TIPGLEK +++PGYAIEYD+I+P+EL +LET+K+ GLF Sbjct: 308 VYPNGISTSLPEDVQLEILKTIPGLEKAVLLQPGYAIEYDFIDPRELKRSLETRKVCGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEA AQGL+AG+N+AR++ + + RT++YIGVM+DDLTS+GV EPY Sbjct: 368 LAGQINGTTGYEEAGAQGLLAGLNAARRAAGSEPVILQRTEAYIGVMVDDLTSRGVSEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAE+R+SLR DNAD RLTP+ ++G + + R+KR+ + R + +SL +T Sbjct: 428 RMFTSRAEFRLSLRADNADQRLTPLADEVGILSKERRKRYLTRETALSHARMVTQSLSIT 487 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + QDG R+AY+ LSYPD ++ L +I P+ + E L+IE+ YA Sbjct: 488 PNLAGYYDLRLNQDGVRRSAYDLLSYPDINLDRLIAIWPELASIDPVTREALEIEAQYAV 547 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + ++ EE+ LIP D+ ++ LSNELK+KL KP + +A +++GMTPA Sbjct: 548 YMERQQSDIAVMEREERLLIPSGLDFDAISGLSNELKQKLKQRKPETIAEAQRVDGMTPA 607 Query: 605 ALNLLLIYIKK 615 A+ LL+ I+K Sbjct: 608 AVALLIAQIRK 618 >gi|225853492|ref|YP_002733725.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Brucella melitensis ATCC 23457] gi|256263028|ref|ZP_05465560.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Brucella melitensis bv. 2 str. 63/9] gi|225641857|gb|ACO01771.1| glucose-inhibited division protein A [Brucella melitensis ATCC 23457] gi|263092901|gb|EEZ17076.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Brucella melitensis bv. 2 str. 63/9] Length = 636 Score = 732 bits (1890), Expect = 0.0, Method: Compositional matrix adjust. Identities = 354/611 (57%), Positives = 455/611 (74%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIVIGGGHAGCEAA+ AA+ GA TAL+TH+ TIG MSCNPAIGGLGKGHLVREIDA Sbjct: 8 AFDVIVIGGGHAGCEAASAAARAGARTALVTHRFDTIGVMSCNPAIGGLGKGHLVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRVAD AGIQFR+LN +KGPAVRGPRTQADR+LYRLAMQ+ I QENL V++G Sbjct: 68 LDGLMGRVADRAGIQFRLLNRRKGPAVRGPRTQADRKLYRLAMQQMITEQENLTVVEGGA 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 A + IS + + D +++C VVLTTGTFL G+IHIG+ + PAGRMG+ P+ L Sbjct: 128 ADLVCDGERISGVTLADGRVLKCGAVVLTTGTFLNGLIHIGEKRFPAGRMGEKPALGLSE 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F F GRLKTGTP RLDG+TI W + Q ADE +PFS MTD+IT QIECGITR Sbjct: 188 RLLSFGFTLGRLKTGTPPRLDGRTIDWQSLDMQSADEEPVPFSLMTDRITTPQIECGITR 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETH II N+ SA+YSG I+ GPRYCPS+EDKIV+FG+R+GHQIFLEPEGL+ D Sbjct: 248 TTPETHDIIRANLHRSAMYSGSIEGIGPRYCPSVEDKIVKFGDRDGHQIFLEPEGLDDDT 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LPE++Q + ++TIPGLEK +++PGYAIEYD+I+P+EL +LET+K+ GLF Sbjct: 308 VYPNGISTSLPEDVQLEILKTIPGLEKAVLLQPGYAIEYDFIDPRELKRSLETRKVCGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEA AQGL+AG+N+AR++ + + RT++YIGVM+DDLTS+GV EPY Sbjct: 368 LAGQINGTTGYEEAGAQGLLAGLNAARRAAGSEPVILQRTEAYIGVMVDDLTSRGVSEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAE+R+SLR DNAD RLTP+ ++G + E R+KR+ + R + +SL +T Sbjct: 428 RMFTSRAEFRLSLRADNADQRLTPLADEVGILSEERRKRYLTRETALSHARMVTQSLSIT 487 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + QDG R+AY+ LSYPD ++ L +I P+ + E L+IE+ YA Sbjct: 488 PNLAGYYDLRLNQDGVRRSAYDLLSYPDINLDRLIAIWPELASIDPVTREALEIEAQYAV 547 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + ++ EE+ LIP D+ ++ LSNELK+KL KP + +A +++G+TPA Sbjct: 548 YMERQQSDIAVMEREERLLIPSGLDFDAISGLSNELKQKLKQRKPETIAEAQRVDGITPA 607 Query: 605 ALNLLLIYIKK 615 A+ LL+ I+K Sbjct: 608 AVALLIAQIRK 618 >gi|326410056|gb|ADZ67121.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Brucella melitensis M28] gi|326539773|gb|ADZ87988.1| glucose-inhibited division protein A [Brucella melitensis M5-90] Length = 634 Score = 732 bits (1890), Expect = 0.0, Method: Compositional matrix adjust. Identities = 354/611 (57%), Positives = 455/611 (74%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIVIGGGHAGCEAA+ AA+ GA TAL+TH+ TIG MSCNPAIGGLGKGHLVREIDA Sbjct: 6 AFDVIVIGGGHAGCEAASAAARAGARTALVTHRFDTIGVMSCNPAIGGLGKGHLVREIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRVAD AGIQFR+LN +KGPAVRGPRTQADR+LYRLAMQ+ I QENL V++G Sbjct: 66 LDGLMGRVADRAGIQFRLLNRRKGPAVRGPRTQADRKLYRLAMQQMITEQENLTVVEGGA 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 A + IS + + D +++C VVLTTGTFL G+IHIG+ + PAGRMG+ P+ L Sbjct: 126 ADLVCDGERISGVTLADGRVLKCGAVVLTTGTFLNGLIHIGEKRFPAGRMGEKPALGLSE 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F F GRLKTGTP RLDG+TI W + Q ADE +PFS MTD+IT QIECGITR Sbjct: 186 RLLSFGFTLGRLKTGTPPRLDGRTIDWQSLDMQSADEEPVPFSLMTDRITTPQIECGITR 245 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETH II N+ SA+YSG I+ GPRYCPS+EDKIV+FG+R+GHQIFLEPEGL+ D Sbjct: 246 TTPETHDIIRANLHRSAMYSGSIEGIGPRYCPSVEDKIVKFGDRDGHQIFLEPEGLDDDT 305 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LPE++Q + ++TIPGLEK +++PGYAIEYD+I+P+EL +LET+K+ GLF Sbjct: 306 VYPNGISTSLPEDVQLEILKTIPGLEKAVLLQPGYAIEYDFIDPRELKRSLETRKVCGLF 365 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEA AQGL+AG+N+AR++ + + RT++YIGVM+DDLTS+GV EPY Sbjct: 366 LAGQINGTTGYEEAGAQGLLAGLNAARRAAGSEPVILQRTEAYIGVMVDDLTSRGVSEPY 425 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAE+R+SLR DNAD RLTP+ ++G + E R+KR+ + R + +SL +T Sbjct: 426 RMFTSRAEFRLSLRADNADQRLTPLADEVGILSEERRKRYLTRETALSHARMVTQSLSIT 485 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + QDG R+AY+ LSYPD ++ L +I P+ + E L+IE+ YA Sbjct: 486 PNLAGYYDLRLNQDGVRRSAYDLLSYPDINLDRLIAIWPELASIDPVTREALEIEAQYAV 545 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + ++ EE+ LIP D+ ++ LSNELK+KL KP + +A +++G+TPA Sbjct: 546 YMERQQSDIAVMEREERLLIPSGLDFDAISGLSNELKQKLKQRKPETIAEAQRVDGITPA 605 Query: 605 ALNLLLIYIKK 615 A+ LL+ I+K Sbjct: 606 AVALLIAQIRK 616 >gi|294851290|ref|ZP_06791963.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Brucella sp. NVSL 07-0026] gi|294819879|gb|EFG36878.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Brucella sp. NVSL 07-0026] Length = 636 Score = 732 bits (1889), Expect = 0.0, Method: Compositional matrix adjust. Identities = 354/611 (57%), Positives = 454/611 (74%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIVIGGGHAGCEAA+ AA+ GA TAL+TH+ TIG MSCNPAIGGLGKGHLVREIDA Sbjct: 8 AFDVIVIGGGHAGCEAASAAARAGARTALVTHRFDTIGVMSCNPAIGGLGKGHLVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRVAD AGIQFR+LN +KGPAVRGP TQADR+LYRLAMQ+ I QENL V++G Sbjct: 68 LDGLMGRVADRAGIQFRLLNRRKGPAVRGPHTQADRKLYRLAMQQMITEQENLTVVEGGA 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 A + IS + + D+ +++C VVLTTGTFL G+IHIG+ + PAGRMG P+ L Sbjct: 128 ADLVCDGERISGVTLADDRVLKCGAVVLTTGTFLNGLIHIGEKRFPAGRMGGKPALGLSE 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F F GRLKTGTP RLDG+TI W + Q ADE +PFS MTD+IT QIECGITR Sbjct: 188 RLLSFGFTLGRLKTGTPPRLDGRTIDWQSLDMQSADEEPVPFSLMTDRITTPQIECGITR 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETH II N+ SA+YSG I+ GPRYCPS+EDKIV+FG+R+GHQIFLEPEGL+ D Sbjct: 248 TTPETHDIIRANLHRSAMYSGSIEGIGPRYCPSVEDKIVKFGDRDGHQIFLEPEGLDDDT 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LPE++Q + ++TIPGLEK +++PGYAIEYD+I+P+EL +LET+K+ GLF Sbjct: 308 VYPNGISTSLPEDVQLEILKTIPGLEKAVLLQPGYAIEYDFIDPRELKRSLETRKVCGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEA AQGL+AG+N+AR++ + + RT++YIGVM+DDLTS+GV EPY Sbjct: 368 LAGQINGTTGYEEAGAQGLLAGLNAARRAAGSEPVILQRTEAYIGVMVDDLTSRGVSEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAE+R+SLR DNAD RLTP+ ++G + E R+KR+ + R + +SL +T Sbjct: 428 RMFTSRAEFRLSLRADNADQRLTPLADEVGILSEERRKRYLTRETALSHARMVTQSLSIT 487 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + QDG R+AY+ LSYPD ++ L +I P+ + E L+IE+ YA Sbjct: 488 PNLAGYYDLRLNQDGVRRSAYDLLSYPDINLDRLIAIWPELASIDPVTREALEIEAQYAV 547 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + ++ EE+ LIP D+ ++ LSNELK+KL KP + +A +++GMTPA Sbjct: 548 YMERQQSDIAVMEREERLLIPSGLDFDAISGLSNELKQKLKQRKPETIAEAQRVDGMTPA 607 Query: 605 ALNLLLIYIKK 615 A+ LL+ I+K Sbjct: 608 AVALLIAQIRK 618 >gi|256060025|ref|ZP_05450207.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Brucella neotomae 5K33] gi|261324002|ref|ZP_05963199.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Brucella neotomae 5K33] gi|261299982|gb|EEY03479.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Brucella neotomae 5K33] Length = 636 Score = 731 bits (1888), Expect = 0.0, Method: Compositional matrix adjust. Identities = 354/611 (57%), Positives = 455/611 (74%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIVIGGG+AGCEAA+ AA+ GA TAL+TH+ TIG MSCNPAIGGLGKGHLVREIDA Sbjct: 8 AFDVIVIGGGYAGCEAASAAARAGARTALVTHRFDTIGVMSCNPAIGGLGKGHLVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRVAD AGIQFR+LN +KGPAVRGPRTQADR+LYRLAMQ+ I QENL V++G Sbjct: 68 LDGLMGRVADRAGIQFRLLNRRKGPAVRGPRTQADRKLYRLAMQQMITEQENLTVVEGGA 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 A + IS + + D +++C VVLTTGTFL G+IHIG+ + PAGRMG+ P+ L Sbjct: 128 ADLVCDGERISGVTLADGRVLKCGAVVLTTGTFLNGLIHIGEKRFPAGRMGEKPALGLSE 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F F GRLKTGTP RLDG+TI W + Q ADE +PFS MTD+IT QIECGITR Sbjct: 188 RLLSFGFTLGRLKTGTPPRLDGRTIDWQSLDMQSADEEPVPFSLMTDRITTPQIECGITR 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETH II N+ SA+YSG I+ GPRYCPS+EDKIV+FG+R+GHQIFLEPEGL+ D Sbjct: 248 TTPETHDIIRANLHRSAMYSGSIEGIGPRYCPSVEDKIVKFGDRDGHQIFLEPEGLDDDT 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LPE++Q + ++TIPGLEK +++PGYAIEYD+I+P+EL +LET+K+ GLF Sbjct: 308 VYPNGISTSLPEDVQLEILKTIPGLEKAVLLQPGYAIEYDFIDPRELKRSLETRKVCGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEA AQGL+AG+N+AR++ + + RT++YIGVM+DDLTS+GV EPY Sbjct: 368 LAGQINGTTGYEEAGAQGLLAGLNAARRAAGSEPVILQRTEAYIGVMVDDLTSRGVSEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAE+R+SLR DNAD RLTP+ ++G + E R+KR+ + R + +SL +T Sbjct: 428 RMFTSRAEFRLSLRADNADQRLTPLADEVGILSEERRKRYLTRETALSHARMVTQSLSIT 487 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + QDG R+AY+ LSYPD ++ L +I P+ + E L+IE+ YA Sbjct: 488 PNLAGYYDLRLNQDGVRRSAYDLLSYPDINLDRLIAIWPELASIDPVTREALEIEAQYAV 547 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + ++ EE+ LIP D+ ++ LSNELK+KL KP + +A +++GMTPA Sbjct: 548 YMERQQSDIAVMEREERLLIPSGLDFDAISGLSNELKQKLKQRKPETIAEAQRVDGMTPA 607 Query: 605 ALNLLLIYIKK 615 A+ LL+ I+K Sbjct: 608 AVALLIAQIRK 618 >gi|241206939|ref|YP_002978035.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860829|gb|ACS58496.1| glucose inhibited division protein A [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 625 Score = 731 bits (1888), Expect = 0.0, Method: Compositional matrix adjust. Identities = 367/616 (59%), Positives = 462/616 (75%), Gaps = 1/616 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M + +DVIVIGGGHAG EAA+ AA+LGA TALITH+ TIG MSCNPAIGGLGKGHLVR Sbjct: 1 MTDNVFDVIVIGGGHAGSEAASAAARLGAKTALITHRRDTIGVMSCNPAIGGLGKGHLVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDA+DGLMGRVAD AGIQFR+LN KKG AVRGPRTQADR+LYRLAM I + +LD+I Sbjct: 61 EIDAMDGLMGRVADVAGIQFRILNKKKGAAVRGPRTQADRKLYRLAMLAAIEATPDLDII 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 +G+ ++ ++M+D ++ VVLTTGTFLRG+IHIG K PAGR+G++PS Sbjct: 121 EGDAFDLEVVDGCVAGVIMKDGRTLKAPAVVLTTGTFLRGLIHIGSEKTPAGRVGEAPSI 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 L + + GRLKTGTPARLDGKTI W +Q ADE L+PFSFMTD IT QIEC Sbjct: 181 GLSATLARLGLRLGRLKTGTPARLDGKTIDWQSVGRQGADEELVPFSFMTDTITTPQIEC 240 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 G+TRT THRII++NI SA+YSG I+ GPRYCPSIEDK+V+FGER+GHQ+FLEPEGL Sbjct: 241 GVTRTTEATHRIIVDNIMRSAMYSGQIEGVGPRYCPSIEDKLVKFGERDGHQVFLEPEGL 300 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + D VYPNGIST+LP E+Q FI+TIPGLE I++PGYAIEYD+++P+EL +LE K++ Sbjct: 301 DDDTVYPNGISTSLPAEVQAAFIKTIPGLETARILQPGYAIEYDHVDPRELTLSLEVKRL 360 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLFLAGQINGTTGYEEAAAQGL AG+N+A +S+ FSRT+SYIGVMIDDLTS+GV Sbjct: 361 RGLFLAGQINGTTGYEEAAAQGLAAGLNAALRSSDSHPFHFSRTNSYIGVMIDDLTSRGV 420 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR++LR DNAD RLTP+ M+LGC+ R +RF Y E + R+LL+S Sbjct: 421 TEPYRMFTSRAEYRLTLRADNADMRLTPLAMRLGCVSNARVQRFTSYRAEIDTSRALLQS 480 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDAR-KFSSLVIERLQIE 539 L LT ++ DG+ RTAY+ LSYP++ L + P+ + + E L+IE Sbjct: 481 LALTPNEARRAGLNINLDGQRRTAYDLLSYPNYDFVALRHVWPEKLGQIGPKIAEALEIE 540 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + Y+ Y RQ + + +E+R IP DF+Y +L LSNELK KLS +PF++ QA+ +E Sbjct: 541 AGYSVYLDRQAAAIVDQQRDEQRQIPPDFNYDALSGLSNELKLKLSAARPFSIAQAAIVE 600 Query: 600 GMTPAALNLLLIYIKK 615 GMTPAA+ LLL+++++ Sbjct: 601 GMTPAAVALLLVHLRR 616 >gi|254705062|ref|ZP_05166890.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Brucella suis bv. 3 str. 686] gi|261755765|ref|ZP_05999474.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Brucella suis bv. 3 str. 686] gi|261745518|gb|EEY33444.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Brucella suis bv. 3 str. 686] Length = 636 Score = 731 bits (1886), Expect = 0.0, Method: Compositional matrix adjust. Identities = 353/611 (57%), Positives = 454/611 (74%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIVIGGGHAGCEAA+ AA+ GA TAL+TH+ TIG MSCNPAIGGLGKGHLVREIDA Sbjct: 8 AFDVIVIGGGHAGCEAASAAARAGARTALVTHRFDTIGVMSCNPAIGGLGKGHLVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRVAD AGIQFR+LN +KGPAVRGPRTQADR+LYRLAMQ+ I QENL V++G Sbjct: 68 LDGLMGRVADRAGIQFRLLNRRKGPAVRGPRTQADRKLYRLAMQQMITEQENLTVVEGGA 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 A + IS + + D +++C VVLT GTFL G+IHIG+ + PAGRMG+ P+ L Sbjct: 128 ADLVCDGERISGVTLADGRVLKCGAVVLTIGTFLNGLIHIGEKRFPAGRMGEKPALGLSE 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F F GRLKTGTP RLDG+TI W + Q ADE +PFS MTD+IT QIECGITR Sbjct: 188 RLLSFGFTLGRLKTGTPPRLDGRTIDWQSLDMQSADEEPVPFSLMTDRITTPQIECGITR 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETH II N+ SA+YSG I+ GPRYCPS+EDKIV+FG+R+GHQIFLEPEGL+ D Sbjct: 248 TTPETHDIIRANLHRSAMYSGSIEGIGPRYCPSVEDKIVKFGDRDGHQIFLEPEGLDDDT 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LPE++Q + ++TIPGLEK +++PGYAIEYD+I+P+EL +LET+K+ GLF Sbjct: 308 VYPNGISTSLPEDVQLEILKTIPGLEKAVLLQPGYAIEYDFIDPRELKRSLETRKVCGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEA AQGL+AG+N+AR++ + + RT++YIGVM+DDLTS+GV EPY Sbjct: 368 LAGQINGTTGYEEAGAQGLLAGLNAARRAAGSEPVILQRTEAYIGVMVDDLTSRGVSEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAE+R+SLR DNAD RLTP+ ++G + + R+KR+ + R + +SL +T Sbjct: 428 RMFTSRAEFRLSLRADNADQRLTPLADEVGILSKERRKRYLTRETALSHARMVTQSLSIT 487 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + QDG R+AY+ LSYPD ++ L +I P+ + E L+IE+ YA Sbjct: 488 PNLAGYYDLRLNQDGVRRSAYDLLSYPDINLDRLIAIWPELASIDPVTREALEIEAQYAV 547 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + ++ EE+ LIP D+ ++ LSNELK+KL KP + +A +++GMTPA Sbjct: 548 YMERQQSDIAVMEREERLLIPSGLDFDAISGLSNELKQKLKQRKPETIAEAQRVDGMTPA 607 Query: 605 ALNLLLIYIKK 615 A+ LL+ I+K Sbjct: 608 AVALLIAQIRK 618 >gi|256045663|ref|ZP_05448541.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Brucella melitensis bv. 1 str. Rev.1] gi|260562965|ref|ZP_05833451.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Brucella melitensis bv. 1 str. 16M] gi|265992085|ref|ZP_06104642.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Brucella melitensis bv. 1 str. Rev.1] gi|21263665|sp|Q8YJS5|MNMG_BRUME RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|260152981|gb|EEW88073.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Brucella melitensis bv. 1 str. 16M] gi|263003151|gb|EEZ15444.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Brucella melitensis bv. 1 str. Rev.1] Length = 636 Score = 730 bits (1885), Expect = 0.0, Method: Compositional matrix adjust. Identities = 353/611 (57%), Positives = 454/611 (74%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIVIGGGHAGCEAA+ AA+ GA TAL+TH+ TIG MSCNPAIGGLGKGHLVREIDA Sbjct: 8 AFDVIVIGGGHAGCEAASAAARAGARTALVTHRFDTIGVMSCNPAIGGLGKGHLVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRVAD AGIQFR+LN +KGPAVRGPRTQADR+LYRL+MQ+ I QENL V++G Sbjct: 68 LDGLMGRVADRAGIQFRLLNRRKGPAVRGPRTQADRKLYRLSMQQMITEQENLTVVEGGA 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 A + IS + + D +++C VVLTTGTFL G+IHIG+ + PAGRMG+ P+ L Sbjct: 128 ADLVCDGERISGVTLADGRVLKCGAVVLTTGTFLNGLIHIGEKRFPAGRMGEKPALGLSE 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F F GRLKTGTP RLDG+TI W + Q ADE +PFS MTD+IT QIECGITR Sbjct: 188 RLLSFGFTLGRLKTGTPPRLDGRTIDWQSLDMQSADEEPVPFSLMTDRITTPQIECGITR 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETH II N+ SA+YSG I+ GPRYCPS+EDKIV+FG R+GHQIFLEPEGL+ D Sbjct: 248 TTPETHDIIRANLHRSAMYSGSIEGIGPRYCPSVEDKIVKFGNRDGHQIFLEPEGLDDDT 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LPE++Q + ++TIPGLEK +++PGYAIEYD+I+P+EL +LET+K+ GLF Sbjct: 308 VYPNGISTSLPEDVQLEILKTIPGLEKAVLLQPGYAIEYDFIDPRELKRSLETRKVCGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEA AQGL+AG+N+AR++ + + RT++YIGVM+DDLTS+GV EPY Sbjct: 368 LAGQINGTTGYEEAGAQGLLAGLNAARRAAGSEPVILQRTEAYIGVMVDDLTSRGVSEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAE+R+SLR DNAD RLTP+ ++G + E R+KR+ + R + +SL +T Sbjct: 428 RMFTSRAEFRLSLRADNADQRLTPLADEVGILSEERRKRYLTRETALSHARMVTQSLSIT 487 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + QDG R+AY+ LSYPD ++ L +I P+ + E L+IE+ YA Sbjct: 488 PNLAGYYDLRLNQDGVRRSAYDLLSYPDINLDRLIAIWPELASIDPVTREALEIEAQYAV 547 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + ++ EE+ LIP D+ ++ LSNELK+KL KP + +A +++G+TPA Sbjct: 548 YMERQQSDIAVMEREERLLIPSGLDFDAISGLSNELKQKLKQRKPETIAEAQRVDGITPA 607 Query: 605 ALNLLLIYIKK 615 A+ LL+ I+K Sbjct: 608 AVALLIAQIRK 618 >gi|17986291|ref|NP_538925.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Brucella melitensis bv. 1 str. 16M] gi|17981873|gb|AAL51189.1| glucose inhibited division protein a [Brucella melitensis bv. 1 str. 16M] Length = 658 Score = 730 bits (1885), Expect = 0.0, Method: Compositional matrix adjust. Identities = 353/611 (57%), Positives = 454/611 (74%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIVIGGGHAGCEAA+ AA+ GA TAL+TH+ TIG MSCNPAIGGLGKGHLVREIDA Sbjct: 30 AFDVIVIGGGHAGCEAASAAARAGARTALVTHRFDTIGVMSCNPAIGGLGKGHLVREIDA 89 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRVAD AGIQFR+LN +KGPAVRGPRTQADR+LYRL+MQ+ I QENL V++G Sbjct: 90 LDGLMGRVADRAGIQFRLLNRRKGPAVRGPRTQADRKLYRLSMQQMITEQENLTVVEGGA 149 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 A + IS + + D +++C VVLTTGTFL G+IHIG+ + PAGRMG+ P+ L Sbjct: 150 ADLVCDGERISGVTLADGRVLKCGAVVLTTGTFLNGLIHIGEKRFPAGRMGEKPALGLSE 209 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F F GRLKTGTP RLDG+TI W + Q ADE +PFS MTD+IT QIECGITR Sbjct: 210 RLLSFGFTLGRLKTGTPPRLDGRTIDWQSLDMQSADEEPVPFSLMTDRITTPQIECGITR 269 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETH II N+ SA+YSG I+ GPRYCPS+EDKIV+FG R+GHQIFLEPEGL+ D Sbjct: 270 TTPETHDIIRANLHRSAMYSGSIEGIGPRYCPSVEDKIVKFGNRDGHQIFLEPEGLDDDT 329 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LPE++Q + ++TIPGLEK +++PGYAIEYD+I+P+EL +LET+K+ GLF Sbjct: 330 VYPNGISTSLPEDVQLEILKTIPGLEKAVLLQPGYAIEYDFIDPRELKRSLETRKVCGLF 389 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEA AQGL+AG+N+AR++ + + RT++YIGVM+DDLTS+GV EPY Sbjct: 390 LAGQINGTTGYEEAGAQGLLAGLNAARRAAGSEPVILQRTEAYIGVMVDDLTSRGVSEPY 449 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAE+R+SLR DNAD RLTP+ ++G + E R+KR+ + R + +SL +T Sbjct: 450 RMFTSRAEFRLSLRADNADQRLTPLADEVGILSEERRKRYLTRETALSHARMVTQSLSIT 509 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + QDG R+AY+ LSYPD ++ L +I P+ + E L+IE+ YA Sbjct: 510 PNLAGYYDLRLNQDGVRRSAYDLLSYPDINLDRLIAIWPELASIDPVTREALEIEAQYAV 569 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + ++ EE+ LIP D+ ++ LSNELK+KL KP + +A +++G+TPA Sbjct: 570 YMERQQSDIAVMEREERLLIPSGLDFDAISGLSNELKQKLKQRKPETIAEAQRVDGITPA 629 Query: 605 ALNLLLIYIKK 615 A+ LL+ I+K Sbjct: 630 AVALLIAQIRK 640 >gi|239833102|ref|ZP_04681431.1| glucose-inhibited division protein A [Ochrobactrum intermedium LMG 3301] gi|239825369|gb|EEQ96937.1| glucose-inhibited division protein A [Ochrobactrum intermedium LMG 3301] Length = 654 Score = 730 bits (1885), Expect = 0.0, Method: Compositional matrix adjust. Identities = 357/610 (58%), Positives = 448/610 (73%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAGCEAA+ AA+ GA TAL+TH+ TIG MSCNPAIGGLGKGHLVREIDAL Sbjct: 27 FDVIVIGGGHAGCEAASAAARAGARTALVTHRFDTIGVMSCNPAIGGLGKGHLVREIDAL 86 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGLMGRVAD AGIQFR+LN +KGPAVRGPRTQADR+LYRLAMQ+ I +Q+NL V++G Sbjct: 87 DGLMGRVADEAGIQFRLLNRRKGPAVRGPRTQADRKLYRLAMQKMIAAQDNLSVVEGGAH 146 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + I+ +++ D + C VVLTTGTFL G+IHIG+ KIPAGRMG+ P+ L Sbjct: 147 DLLEQDGRITGVILSDGRTLTCGAVVLTTGTFLNGLIHIGEKKIPAGRMGEKPALGLSER 206 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 F F GRLKTGTP RLDG+TI W + Q ADE +PFS MTD+IT QI+CGITRT Sbjct: 207 LTSFGFALGRLKTGTPPRLDGRTIDWQSLDMQSADEDPVPFSLMTDRITTPQIDCGITRT 266 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 ETH II N+ SA+YSG I+ GPRYCPS+EDKIV+FG+R+GHQIFLEPEGL+ D V Sbjct: 267 TPETHAIIRANLHRSAMYSGSIEGIGPRYCPSVEDKIVKFGDRDGHQIFLEPEGLDDDTV 326 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YPNGIST+LPE++Q ++TIPGLEK +++PGYAIEYD+I+P+EL +LET+K++GLFL Sbjct: 327 YPNGISTSLPEDVQLDILKTIPGLEKAVMLQPGYAIEYDFIDPRELKRSLETRKVTGLFL 386 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEA AQGL+AGIN+AR+++ + + RT++YIGVM+DDLTS+GV EPYR Sbjct: 387 AGQINGTTGYEEAGAQGLLAGINAARRASGGEPVIIQRTEAYIGVMVDDLTSRGVSEPYR 446 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAE+R+SLR DNAD RLTP+ +LG +G R++RF + R L +SL +T Sbjct: 447 MFTSRAEFRLSLRADNADQRLTPLADRLGILGHARKERFEAREAALSKARVLTQSLTITP 506 Query: 486 KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAY 545 + QDG R+AY+ LSYP+ + L I P+ E L+IE+ YA Y Sbjct: 507 NLAKQYDLHLNQDGVRRSAYDLLSYPEIDLDRLMPIWPELDAIDPTAREALEIEAQYAVY 566 Query: 546 TGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAA 605 RQ + ++ EE+ LIP D + LSNELK KL KP + +A +++GMTPAA Sbjct: 567 MDRQKSDIAVMEREEQLLIPAGLDIDGISGLSNELKHKLKQRKPETIAEAQRVDGMTPAA 626 Query: 606 LNLLLIYIKK 615 L LL+ IKK Sbjct: 627 LALLIAQIKK 636 >gi|148559142|ref|YP_001259866.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Brucella ovis ATCC 25840] gi|166222912|sp|A5VT19|MNMG_BRUO2 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|148370399|gb|ABQ60378.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Brucella ovis ATCC 25840] Length = 636 Score = 730 bits (1884), Expect = 0.0, Method: Compositional matrix adjust. Identities = 354/611 (57%), Positives = 454/611 (74%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIVIGGGHAGCEAA+ AA+ GA TAL+TH+ TIG MSCNPAIGGLGKGHLVREIDA Sbjct: 8 AFDVIVIGGGHAGCEAASAAARAGARTALVTHRFDTIGVMSCNPAIGGLGKGHLVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRVAD AGIQFR+LN +KGPAVRGPRTQADR+LYRLAMQ+ I QENL V++G Sbjct: 68 LDGLMGRVADRAGIQFRLLNRRKGPAVRGPRTQADRKLYRLAMQQIITEQENLTVVEGGA 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 A + IS + + D +++C VVLTTGTFL G+IHIG+ + AGRMG+ P+ L Sbjct: 128 ADLVCDGERISGVTLADGRVLKCGAVVLTTGTFLNGLIHIGEKRFQAGRMGEKPALGLSK 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F F GRLKTGTP RLDG+TI W + Q ADE +PFS MTD+IT QIECGITR Sbjct: 188 RLLSFGFTLGRLKTGTPPRLDGRTIDWQSLDMQSADEEPVPFSLMTDRITTPQIECGITR 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETH II N+ SA+YSG I+ GPRYCPS+EDKIV+FG+R+GHQIFLEPEGL+ D Sbjct: 248 TTPETHDIIRANLHRSAMYSGSIEGIGPRYCPSVEDKIVKFGDRDGHQIFLEPEGLDDDT 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LPE++Q + ++TIPGLEK +++PGYAIEYD+I+P+EL +LET+K+ GLF Sbjct: 308 VYPNGISTSLPEDVQLEILKTIPGLEKAVLLQPGYAIEYDFIDPRELKRSLETRKVCGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEA AQGL+AG+N+AR++ + + RT++YIGVM+DDLTS+GV EPY Sbjct: 368 LAGQINGTTGYEEAGAQGLLAGLNAARRAAGSEPVILQRTEAYIGVMVDDLTSRGVSEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAE+R+SLR DNAD RLTP+ ++G + E R+KR+ + R + +SL +T Sbjct: 428 RMFTSRAEFRLSLRADNADQRLTPLADEVGILSEERRKRYLTRETALSHARMVTQSLSIT 487 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + QDG R+AY+ LSYPD ++ L +I P+ + E L+IE+ YA Sbjct: 488 PNLAGYYDLRLNQDGVRRSAYDLLSYPDINLDRLIAIWPELASIDPVTREALEIEAQYAV 547 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + ++ EE+ LIP D+ ++ LSNELK+KL KP + +A +++GMTPA Sbjct: 548 YMERQQSDIAVMEREERLLIPSGLDFDAISGLSNELKQKLKQRKPETIAEAQRVDGMTPA 607 Query: 605 ALNLLLIYIKK 615 A+ LL+ I+K Sbjct: 608 AVALLIAQIRK 618 >gi|225626440|ref|ZP_03784479.1| glucose-inhibited division protein A [Brucella ceti str. Cudo] gi|225618097|gb|EEH15140.1| glucose-inhibited division protein A [Brucella ceti str. Cudo] Length = 658 Score = 729 bits (1883), Expect = 0.0, Method: Compositional matrix adjust. Identities = 354/611 (57%), Positives = 454/611 (74%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIVIGGGHAG EAA+ AA+ GA TAL+TH+ TIG MSCNPAIGGLGKGHLVREIDA Sbjct: 30 AFDVIVIGGGHAGYEAASAAARAGARTALVTHRFDTIGVMSCNPAIGGLGKGHLVREIDA 89 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRVAD AGIQFR+LN +KGPAVRGPRTQADR+LYRLAMQ+ I QENL V++G Sbjct: 90 LDGLMGRVADRAGIQFRLLNRRKGPAVRGPRTQADRKLYRLAMQQMITEQENLTVVEGGA 149 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 A + IS + + D +++C VVLTTGTFL G+IHIG+ + PAGRMG+ P+ L Sbjct: 150 ADLVCDGERISGVTLADGRVLKCGAVVLTTGTFLNGLIHIGEKRFPAGRMGEKPALGLSE 209 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F F GRLKTGTP RLDG+TI W + Q ADE +PFS MTD+IT QIECGITR Sbjct: 210 RLLSFGFTLGRLKTGTPPRLDGRTIDWQSLDMQSADEEPVPFSLMTDRITTPQIECGITR 269 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETH II N+ SA+YSG I+ GPRYCPS+EDKIV+FG+R+GHQIFLEPEGL+ D Sbjct: 270 TTPETHDIIRANLHRSAMYSGSIEGIGPRYCPSVEDKIVKFGDRDGHQIFLEPEGLDDDT 329 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LPE++Q + ++TIPGLEK +++PGYAIEYD+I+P+EL +LET+K+ GLF Sbjct: 330 VYPNGISTSLPEDVQLEILKTIPGLEKAVLLQPGYAIEYDFIDPRELKRSLETRKVCGLF 389 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEA AQGL+AG+N+AR++ + + RT++YIGVM+DDLTS+GV EPY Sbjct: 390 LAGQINGTTGYEEAGAQGLLAGLNAARRAAGSEPVILQRTEAYIGVMVDDLTSRGVSEPY 449 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAE+R+SLR DNAD RLTP+ ++G + E R+KR+ + R + +SL +T Sbjct: 450 RMFTSRAEFRLSLRADNADQRLTPLADEVGILSEERRKRYLTRETALSHARMVTQSLSIT 509 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + QDG R+AY+ LSYPD ++ L +I P+ + E L+IE+ YA Sbjct: 510 PNLAGYYDLRLNQDGVRRSAYDLLSYPDINLDRLIAIWPELASIDPVTREALEIEAQYAV 569 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + ++ EE+ LIP D+ ++ LSNELK+KL KP + +A +++GMTPA Sbjct: 570 YMERQQSDIAVMEREERLLIPSGLDFDAISGLSNELKQKLKQRKPETIAEAQRVDGMTPA 629 Query: 605 ALNLLLIYIKK 615 A+ LL+ I+K Sbjct: 630 AVALLIAQIRK 640 >gi|256158559|ref|ZP_05456449.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Brucella ceti M490/95/1] gi|256253968|ref|ZP_05459504.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Brucella ceti B1/94] gi|260169468|ref|ZP_05756279.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Brucella sp. F5/99] gi|261221110|ref|ZP_05935391.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Brucella ceti B1/94] gi|261758995|ref|ZP_06002704.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Brucella sp. F5/99] gi|265997071|ref|ZP_06109628.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Brucella ceti M490/95/1] gi|260919694|gb|EEX86347.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Brucella ceti B1/94] gi|261738979|gb|EEY26975.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Brucella sp. F5/99] gi|262551539|gb|EEZ07529.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Brucella ceti M490/95/1] Length = 636 Score = 729 bits (1883), Expect = 0.0, Method: Compositional matrix adjust. Identities = 354/611 (57%), Positives = 454/611 (74%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIVIGGGHAG EAA+ AA+ GA TAL+TH+ TIG MSCNPAIGGLGKGHLVREIDA Sbjct: 8 AFDVIVIGGGHAGYEAASAAARAGARTALVTHRFDTIGVMSCNPAIGGLGKGHLVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRVAD AGIQFR+LN +KGPAVRGPRTQADR+LYRLAMQ+ I QENL V++G Sbjct: 68 LDGLMGRVADRAGIQFRLLNRRKGPAVRGPRTQADRKLYRLAMQQMITEQENLTVVEGGA 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 A + IS + + D +++C VVLTTGTFL G+IHIG+ + PAGRMG+ P+ L Sbjct: 128 ADLVCDGERISGVTLADGRVLKCGAVVLTTGTFLNGLIHIGEKRFPAGRMGEKPALGLSE 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F F GRLKTGTP RLDG+TI W + Q ADE +PFS MTD+IT QIECGITR Sbjct: 188 RLLSFGFTLGRLKTGTPPRLDGRTIDWQSLDMQSADEEPVPFSLMTDRITTPQIECGITR 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETH II N+ SA+YSG I+ GPRYCPS+EDKIV+FG+R+GHQIFLEPEGL+ D Sbjct: 248 TTPETHDIIRANLHRSAMYSGSIEGIGPRYCPSVEDKIVKFGDRDGHQIFLEPEGLDDDT 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LPE++Q + ++TIPGLEK +++PGYAIEYD+I+P+EL +LET+K+ GLF Sbjct: 308 VYPNGISTSLPEDVQLEILKTIPGLEKAVLLQPGYAIEYDFIDPRELKRSLETRKVCGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEA AQGL+AG+N+AR++ + + RT++YIGVM+DDLTS+GV EPY Sbjct: 368 LAGQINGTTGYEEAGAQGLLAGLNAARRAAGSEPVILQRTEAYIGVMVDDLTSRGVSEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAE+R+SLR DNAD RLTP+ ++G + E R+KR+ + R + +SL +T Sbjct: 428 RMFTSRAEFRLSLRADNADQRLTPLADEVGILSEERRKRYLTRETALSHARMVTQSLSIT 487 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + QDG R+AY+ LSYPD ++ L +I P+ + E L+IE+ YA Sbjct: 488 PNLAGYYDLRLNQDGVRRSAYDLLSYPDINLDRLIAIWPELASIDPVTREALEIEAQYAV 547 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + ++ EE+ LIP D+ ++ LSNELK+KL KP + +A +++GMTPA Sbjct: 548 YMERQQSDIAVMEREERLLIPSGLDFDAISGLSNELKQKLKQRKPETIAEAQRVDGMTPA 607 Query: 605 ALNLLLIYIKK 615 A+ LL+ I+K Sbjct: 608 AVALLIAQIRK 618 >gi|306843477|ref|ZP_07476078.1| glucose-inhibited division protein A [Brucella sp. BO1] gi|306276168|gb|EFM57868.1| glucose-inhibited division protein A [Brucella sp. BO1] Length = 636 Score = 729 bits (1882), Expect = 0.0, Method: Compositional matrix adjust. Identities = 353/611 (57%), Positives = 455/611 (74%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIVIGGGHAGCEAA+ AA+ GA TAL+TH+ TIG MSCNPAIGGLGKGHLVREIDA Sbjct: 8 AFDVIVIGGGHAGCEAASAAARAGARTALVTHRFDTIGVMSCNPAIGGLGKGHLVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRVAD AGIQFR+LN +KGPAVRGPRTQADR+LYR AMQ+ I QENL V++G Sbjct: 68 LDGLMGRVADRAGIQFRLLNRRKGPAVRGPRTQADRKLYRHAMQQMITEQENLTVVEGGA 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 A + IS + + D +++C VVLTTGTFL G+IHIG+ + PAGRMG+ P+ L Sbjct: 128 ADLVCDGERISGVTLVDGRVLKCGAVVLTTGTFLNGLIHIGEKRFPAGRMGEKPALGLSE 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F F GRLKTGTP RLDG+TI W + Q ADE +PFS MTD+IT QIECGITR Sbjct: 188 RLLSFGFTLGRLKTGTPPRLDGRTIDWQSLDMQSADEEPVPFSLMTDRITTPQIECGITR 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETH II N+ SA+YSG+I+ GPRYCPS+EDKIV+FG+R+GHQIFLEPEGL+ D Sbjct: 248 TTPETHDIIRANLHRSAMYSGNIEGIGPRYCPSVEDKIVKFGDRDGHQIFLEPEGLDDDT 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LP+++Q + ++TIPGLEK +++PGYAIEYD+I+P+EL +LET+K+ GLF Sbjct: 308 VYPNGISTSLPKDVQLEILKTIPGLEKAVLLQPGYAIEYDFIDPRELKRSLETRKVCGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEA AQGL+AG+N+AR++ + + RT++YIGVM+DDLTS+GV EPY Sbjct: 368 LAGQINGTTGYEEAGAQGLLAGLNAARRAAGSEPVILQRTEAYIGVMVDDLTSRGVSEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAE+R+SLR DNAD RLTP+ ++G + E R+KR+ + R + +SL +T Sbjct: 428 RMFTSRAEFRLSLRADNADQRLTPLADEVGILSEERRKRYLAREAALSHARMVTQSLSIT 487 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + + QDG R+AY+ LSYPD ++ L +I P+ + E L+IE+ YA Sbjct: 488 PNLAGNYDLRLNQDGVRRSAYDLLSYPDINLDRLIAIWPELASIDPVTREALEIEAQYAV 547 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + ++ EE+ LIP D+ ++ LSNELK+KL KP + +A + +GMTPA Sbjct: 548 YMERQQSDIAIMEREERLLIPSGLDFDAISGLSNELKQKLKQRKPETIAEAQRADGMTPA 607 Query: 605 ALNLLLIYIKK 615 A+ LL+ I+K Sbjct: 608 AVALLIAQIRK 618 >gi|163844079|ref|YP_001628483.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Brucella suis ATCC 23445] gi|189039332|sp|B0CJG1|MNMG_BRUSI RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|163674802|gb|ABY38913.1| glucose-inhibited division protein A [Brucella suis ATCC 23445] Length = 636 Score = 729 bits (1881), Expect = 0.0, Method: Compositional matrix adjust. Identities = 352/611 (57%), Positives = 455/611 (74%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIVIGGGHAGCEAA+ AA+ GA TAL+TH+ TIG +SCNPAIGGLGKGHLVREIDA Sbjct: 8 AFDVIVIGGGHAGCEAASAAARAGARTALVTHRFDTIGVISCNPAIGGLGKGHLVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRVAD AGIQFR+LN +KGPAVRGPRTQADR+LYRLA+Q+ I QENL V++G Sbjct: 68 LDGLMGRVADRAGIQFRLLNRRKGPAVRGPRTQADRKLYRLAIQQMITEQENLTVVEGGA 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 A + IS + + D +++C VVLTTGTFL G+IHIG+ + PAGRMG+ P+ L Sbjct: 128 ADLVCDGERISGVTLADGRVLKCGAVVLTTGTFLNGLIHIGEKRFPAGRMGEKPALGLSE 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F F GRLKTGTP RLDG+TI W + Q ADE +PFS MTD+IT QIECGITR Sbjct: 188 RLLSFGFTLGRLKTGTPPRLDGRTIDWQSLDMQSADEEPVPFSLMTDRITTPQIECGITR 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETH II N+ SA+YSG I+ GPRYCPS+EDKIV+FG+R+GHQIFLEPEGL+ D Sbjct: 248 TTPETHDIIRANLHRSAMYSGSIEGIGPRYCPSVEDKIVKFGDRDGHQIFLEPEGLDDDT 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LPE++Q + ++TIPGLEK +++PGYAIEYD+I+P+EL +LET+K+ GLF Sbjct: 308 VYPNGISTSLPEDVQLEILKTIPGLEKAVLLQPGYAIEYDFIDPRELKRSLETRKVCGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEA AQGL+AG+N+AR++ + + RT++YIGVM+DDLTS+GV EPY Sbjct: 368 LAGQINGTTGYEEAGAQGLLAGLNAARRAAGSEPVILQRTEAYIGVMVDDLTSRGVSEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAE+R+SLR DNAD RLTP+ ++G + + R+KR+ + R + +SL +T Sbjct: 428 RMFTSRAEFRLSLRADNADQRLTPLADEVGILSKERRKRYLTRETALSHARMVTQSLSIT 487 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + QDG R+AY+ LSYPD ++ L +I P+ + E L+IE+ YA Sbjct: 488 PNLAGYYDLRLNQDGVRRSAYDLLSYPDINLDRLIAIWPELASIDPVTREALEIEAQYAV 547 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + ++ EE+ LIP D+ ++ LSNELK+KL KP + +A +++GMTPA Sbjct: 548 YMERQQSDIAVMEREERLLIPSGLDFDAISGLSNELKQKLKQRKPETIAEAQRVDGMTPA 607 Query: 605 ALNLLLIYIKK 615 A+ LL+ I+K Sbjct: 608 AVALLIAQIRK 618 >gi|256112385|ref|ZP_05453306.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Brucella melitensis bv. 3 str. Ether] gi|265993821|ref|ZP_06106378.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Brucella melitensis bv. 3 str. Ether] gi|262764802|gb|EEZ10723.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Brucella melitensis bv. 3 str. Ether] Length = 636 Score = 728 bits (1879), Expect = 0.0, Method: Compositional matrix adjust. Identities = 352/611 (57%), Positives = 454/611 (74%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIVIGGGHAGCEAA+ AA+ GA TAL+TH+ TIG MSCNPAIGGLGKGHLVREIDA Sbjct: 8 AFDVIVIGGGHAGCEAASAAARAGARTALVTHRFDTIGVMSCNPAIGGLGKGHLVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRVAD AGIQFR+LN +KGPAVRGPRTQADR+LYRLAMQ+ I QENL V++G Sbjct: 68 LDGLMGRVADRAGIQFRLLNRRKGPAVRGPRTQADRKLYRLAMQQMITEQENLTVVEGGA 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 A + IS + + D +++C VVLTTGTFL G+IHIG+ + PAGRMG+ P+ L Sbjct: 128 ADLVCDGERISGVTLADGRVLKCGAVVLTTGTFLNGLIHIGEKRFPAGRMGEKPALGLSE 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F F GRLKTGTP RLDG+TI W + Q ADE +PFS MTD+IT QIECGITR Sbjct: 188 RLLSFGFTLGRLKTGTPPRLDGRTIDWQSLDMQSADEEPVPFSLMTDRITTPQIECGITR 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETH II N+ SA+YSG I+ GPRYCPS+EDKIV+FG+R+GHQIFLEPEGL+ D Sbjct: 248 TTPETHDIIRANLHRSAMYSGSIEGIGPRYCPSVEDKIVKFGDRDGHQIFLEPEGLDDDT 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LPE++Q + ++TIPGLEK +++PGYAIEYD+I+P+EL +LET+K+ GLF Sbjct: 308 VYPNGISTSLPEDVQLEILKTIPGLEKAVLLQPGYAIEYDFIDPRELKRSLETRKVCGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEA AQGL+AG+N+AR++ + + RT++YIGVM+DDLTS+GV EPY Sbjct: 368 LAGQINGTTGYEEAGAQGLLAGLNAARRAAGSEPVILQRTEAYIGVMVDDLTSRGVSEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAE+R+SLR DNAD RLTP+ ++G + E R+KR+ + R + +SL +T Sbjct: 428 RMFTSRAEFRLSLRADNADQRLTPLADEVGILSEERRKRYLTRETALSHARMVTQSLSIT 487 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + QDG R+AY+ LSYPD ++ L +I P+ + + L+IE+ YA Sbjct: 488 PNLAGYYDLRLNQDGVRRSAYDLLSYPDINLDRLIAIWPELASIDPVTRKALEIEAQYAV 547 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + ++ EE+ LIP D+ ++ LSNELK+KL KP + +A +++G+ PA Sbjct: 548 YMERQQSDIAVMEREERLLIPSGLDFDAISGLSNELKQKLKQRKPETIAEAQRVDGIPPA 607 Query: 605 ALNLLLIYIKK 615 A+ LL+ I+K Sbjct: 608 AVALLIAQIRK 618 >gi|254718103|ref|ZP_05179914.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Brucella sp. 83/13] gi|265983056|ref|ZP_06095791.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Brucella sp. 83/13] gi|306839728|ref|ZP_07472530.1| glucose-inhibited division protein A [Brucella sp. NF 2653] gi|264661648|gb|EEZ31909.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Brucella sp. 83/13] gi|306405188|gb|EFM61465.1| glucose-inhibited division protein A [Brucella sp. NF 2653] Length = 636 Score = 727 bits (1877), Expect = 0.0, Method: Compositional matrix adjust. Identities = 352/611 (57%), Positives = 454/611 (74%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIVIGGGHAGCEAA+ AA+ GA TAL+TH+ TIG MSCNPAIGGLGKGHLVREIDA Sbjct: 8 AFDVIVIGGGHAGCEAASAAARAGARTALVTHRFDTIGVMSCNPAIGGLGKGHLVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 DGLMGRVAD AGIQFR+LN +KGPAVRGPRTQADR+LYRLAMQ+ I QENL V++G Sbjct: 68 FDGLMGRVADKAGIQFRLLNRRKGPAVRGPRTQADRKLYRLAMQQMITEQENLIVVEGGA 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 A + IS + + D +++C VVLTTGTFL G+IHIG+ + PAGRMG+ P+ L Sbjct: 128 ADLVCDGERISGVTLVDGRVLKCGAVVLTTGTFLNGLIHIGEKRFPAGRMGEKPALGLSE 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F F GRLKTGTP RLDG+TI W + Q ADE +PFS MT++IT QIECGITR Sbjct: 188 RLLSFGFTLGRLKTGTPPRLDGRTIDWQSLDMQSADEEPVPFSLMTNRITTPQIECGITR 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETH II N+ SA+YSG+I+ GPRYCPS+EDKIV+FG+R+GHQIFLEPEGL+ D Sbjct: 248 TTPETHDIIRANLHRSAMYSGNIEGIGPRYCPSVEDKIVKFGDRDGHQIFLEPEGLDDDT 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LPE++Q + ++TIPGL K +++PGYAIEYD+I+P+EL +LET+K+ GLF Sbjct: 308 VYPNGISTSLPEDVQLEILKTIPGLGKAVLLQPGYAIEYDFIDPRELKRSLETRKVCGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEA AQGL+AG+N+AR++ + + RT++YIGVM+DDLTS+GV EPY Sbjct: 368 LAGQINGTTGYEEAGAQGLLAGLNAARRAAGSEPVILQRTEAYIGVMVDDLTSRGVSEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAE+R+SLR DNAD RLTP+ ++G + E R+KR+ + R + +SL +T Sbjct: 428 RMFTSRAEFRLSLRADNADQRLTPLADEVGILSEERRKRYLAREAALSHARMVTQSLSIT 487 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + QDG R+AY+ LSYPD ++ L +I P+ + E L+IE+ YA Sbjct: 488 PNLAGHYDLRLNQDGVRRSAYDLLSYPDINLDRLIAIWPELASIDPITREALEIEAQYAV 547 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + ++ EE+ LIP D+ ++ LSNELK+KL KP + +A +++GMTPA Sbjct: 548 YMERQQSDIAVMEREERLLIPSGLDFDAISGLSNELKQKLKQRKPETIAEAQRVDGMTPA 607 Query: 605 ALNLLLIYIKK 615 A+ LL+ I+K Sbjct: 608 AVALLIAQIRK 618 >gi|240851402|ref|YP_002972805.1| glucose inhibited division protein A [Bartonella grahamii as4aup] gi|240268525|gb|ACS52113.1| glucose inhibited division protein A [Bartonella grahamii as4aup] Length = 622 Score = 727 bits (1876), Expect = 0.0, Method: Compositional matrix adjust. Identities = 344/613 (56%), Positives = 443/613 (72%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 +SYDV+++GGGHAGCEAA+ +A++GA TAL+THK S +G+MSCNPAIGGLGKGHLVREID Sbjct: 2 QSYDVVIVGGGHAGCEAASASARVGAKTALVTHKISALGTMSCNPAIGGLGKGHLVREID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDGLMGR ADAAGIQFR+LN +KGPAVRGPRTQADR+LY+ A+Q+ + QENL +I+ E Sbjct: 62 ALDGLMGRAADAAGIQFRLLNRRKGPAVRGPRTQADRQLYKKAIQKLLKEQENLTLIEDE 121 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + N +S ++++ I VVLTTGTFL G IHIG AGRMGD S L Sbjct: 122 VIDLVVKDNCVSGVILKKQGTILSGAVVLTTGTFLNGFIHIGDKTWAAGRMGDQSSVHLA 181 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + GRLKTGTPARL KTI WD KQ ADE IPFS +T+KI QIEC IT Sbjct: 182 KRLKNYHIKLGRLKTGTPARLSKKTIAWDHLPKQQADENPIPFSLLTEKIEQPQIECAIT 241 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 RTN TH+II +NI SA+YSG+I+ GPRYCPS+EDKIV+FGER+GHQIFLEPEGLN D Sbjct: 242 RTNERTHQIIRDNIYRSALYSGNIEGLGPRYCPSVEDKIVKFGERDGHQIFLEPEGLNDD 301 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNG+ST+LPE++Q ++TI GLE +++PGYAIEYD++NP++L +LE + + GL Sbjct: 302 TVYPNGLSTSLPEDVQISLLKTIEGLENAIVLQPGYAIEYDFVNPQQLTRSLELRSLPGL 361 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 FLAGQINGTTGYEEAAAQGL+AG+N+A K KLD I SR+ +YIGVM+DDL S+GV EP Sbjct: 362 FLAGQINGTTGYEEAAAQGLLAGLNAAHKVGKLDEILISRSTAYIGVMVDDLVSRGVCEP 421 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R+SLR DNAD RLTP+ K G + E R + + K + + RS+ ++L L Sbjct: 422 YRMFTSRAEFRLSLRSDNADTRLTPLAQKWGIVSEIRWECYQKKQERLDQARSICQNLFL 481 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 T S+ + DG R+AY+FL+YP +++ L P + S E L+IE+ YA Sbjct: 482 TPNEASAHGLHVNHDGIRRSAYDFLAYPHMTLERLSDFWPQLQTIDSKTAESLEIEAQYA 541 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y +Q ++ +E+ IP D ++ LSNELK K+ + P ++ A KI+GMTP Sbjct: 542 VYLDKQAQNIASLQRDERLEIPSSLDIQAISGLSNELKSKIQEVSPRSIADAQKIDGMTP 601 Query: 604 AALNLLLIYIKKN 616 AAL+L++ YI++ Sbjct: 602 AALSLIITYIQRQ 614 >gi|304392708|ref|ZP_07374648.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ahrensia sp. R2A130] gi|303295338|gb|EFL89698.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ahrensia sp. R2A130] Length = 625 Score = 723 bits (1867), Expect = 0.0, Method: Compositional matrix adjust. Identities = 342/613 (55%), Positives = 447/613 (72%), Gaps = 1/613 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 +S+DV+VIGGGHAG EAA+ +A++GA TAL+T IG+MSCNPAIGGLGKGHLVREID Sbjct: 5 KSFDVVVIGGGHAGTEAASASARMGAKTALVTLSADGIGTMSCNPAIGGLGKGHLVREID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDGLMGRVADA+GIQFR+LN +KGPAVRGPRTQ+DR+LY++AM E SQ NL +I+GE Sbjct: 65 ALDGLMGRVADASGIQFRMLNRRKGPAVRGPRTQSDRKLYKIAMADETASQNNLAIIEGE 124 Query: 124 VAGF-NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 V +S + + D + IRC VVLTTGTFL G+IHIG+ +PAGRMG+ PS +L Sbjct: 125 VIDIVPYSDGRVSGVQLADGTFIRCGAVVLTTGTFLNGLIHIGEKTVPAGRMGEKPSIAL 184 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGI 242 N + GRLKTGTPARLDG+TI W E Q AD+ +PFS +TD+I Q+ CGI Sbjct: 185 ANRLRSLELPLGRLKTGTPARLDGRTIDWASLEMQEADDPPVPFSTLTDRIIVPQVACGI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 TRT TH II +N+ SA+YSG I GPRYCPS+EDKIV+FGER+GHQIFLEPEGL+ Sbjct: 245 TRTTPATHAIIRDNVHRSAMYSGQIGGVGPRYCPSVEDKIVKFGERDGHQIFLEPEGLDD 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 VYPNGIST+LPEE+Q +FI TIPGLE+ I++PGYAIEYDY++P+ L P+LE + + G Sbjct: 305 HTVYPNGISTSLPEEVQSEFIATIPGLEQAKILQPGYAIEYDYVDPRALRPSLEIRAMQG 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+LAGQINGTTGYEEA AQGLVAG+N+AR+ ++ + FSR++SYIGVM+DDL ++GV E Sbjct: 365 LYLAGQINGTTGYEEAGAQGLVAGLNAARQVAGMEPVHFSRSESYIGVMLDDLVTRGVSE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+SLR DNAD RLTP ++LG RQ F + E + R+L S+ Sbjct: 425 PYRMFTSRAEYRLSLRADNADQRLTPKAIELGICSATRQATFTSKLTELDAARNLCGSVS 484 Query: 483 LTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSY 542 LT ++ + QDG R A + L+Y + S++ L +I P+ + E+++IE+ Y Sbjct: 485 LTPSEATAHGLKITQDGVRRDATDLLAYSEVSMEILSNIWPELASLDPAIAEQVEIEAGY 544 Query: 543 AAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMT 602 A Y RQ + + +E IP FD++++ +SNE + KL ++P ++ QAS+I+GMT Sbjct: 545 AVYMARQKRDIDAVLRDEALSIPDQFDFAAIGGMSNEARSKLVSVRPSSIGQASRIDGMT 604 Query: 603 PAALNLLLIYIKK 615 PAA LLL +++ Sbjct: 605 PAATTLLLAAVRR 617 >gi|319407871|emb|CBI81524.1| glucose inhibited division protein A [Bartonella sp. 1-1C] Length = 622 Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust. Identities = 342/613 (55%), Positives = 446/613 (72%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 +SYDVIVIGGGHAGCEAA+ +A++GA TAL+T++ STIG+MSCNPAIGGLGKGHLVREID Sbjct: 2 QSYDVIVIGGGHAGCEAASASARVGAQTALVTYQISTIGTMSCNPAIGGLGKGHLVREID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDGLMG+ ADAAGIQFR+LN KKGPAVRGPRTQADR+LY+ +Q+ + Q+NL +I+ E Sbjct: 62 ALDGLMGQAADAAGIQFRLLNRKKGPAVRGPRTQADRQLYKNKIQQLLQEQDNLILIEDE 121 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + N +S +V++ I + VVLTTGTFLRG++HIG PAGRMG+ S L Sbjct: 122 VIDIIVKDNRVSGVVLKKQGSIFSNAVVLTTGTFLRGLVHIGNKTWPAGRMGEKSSIQLA 181 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + + GRLKTGTPARL+ KTI W+K KQ ADE +PFSF+T+KI QIEC IT Sbjct: 182 ERLKNYSINLGRLKTGTPARLNKKTIFWNKLSKQQADENPVPFSFLTEKIEQPQIECAIT 241 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 RTN +TH+II ENI SA+YSG I+ GPRYCPSIEDKI++FG+R+GHQIFLEPEGL + Sbjct: 242 RTNEKTHQIIRENIHKSALYSGAIEGLGPRYCPSIEDKIIKFGDRDGHQIFLEPEGLENN 301 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNG+ST+LPEEIQ F+RTI GLE V I++PGYAIEYD+++P++LF TLE + + GL Sbjct: 302 TIYPNGLSTSLPEEIQLSFLRTIEGLENVEILQPGYAIEYDFVDPRQLFKTLELRSLPGL 361 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 FLAGQINGTTGYEEAAAQGL+AG+N+ARK L+ I SR+ +YIGVM+DDL +GV EP Sbjct: 362 FLAGQINGTTGYEEAAAQGLLAGLNAARKVGGLEEIILSRSTAYIGVMVDDLILRGVCEP 421 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R+SLR DNAD RLTP+ + G + + R + + + R + + L L Sbjct: 422 YRMFTSRAEFRLSLRADNADTRLTPLAQEWGIVSQTRWSCYQQKQHHLDQARLMCQKLFL 481 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 T + +DG R+AY+ L+YP ++ L P + ++E L+IE+ YA Sbjct: 482 TPNEAFVHGLQINRDGVRRSAYDLLAYPHMNVARLAHFWPQLHSIDAKIVEALEIEAQYA 541 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y RQ + ++ +E IP ++ + LSNELK K+ + P ++ A KI+GMTP Sbjct: 542 VYLERQTQDIIALQRDEHLEIPSSLNFQEISGLSNELKTKIQQISPRSIADAQKIDGMTP 601 Query: 604 AALNLLLIYIKKN 616 AAL+L+L YI++ Sbjct: 602 AALSLILTYIQRQ 614 >gi|319404911|emb|CBI78512.1| glucose inhibited division protein A [Bartonella rochalimae ATCC BAA-1498] Length = 622 Score = 718 bits (1854), Expect = 0.0, Method: Compositional matrix adjust. Identities = 342/613 (55%), Positives = 446/613 (72%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 +SYDVIVIGGGHAGCEAA+ +A++GA TALIT++ STIG+MSCNPAIGGLGKGHLVREID Sbjct: 2 QSYDVIVIGGGHAGCEAASASARVGAQTALITYQISTIGTMSCNPAIGGLGKGHLVREID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDGLMG+ ADAAGIQFR+LN KKGPAVRGPRTQADR+LY+ +Q+ + Q+NL +I+ E Sbjct: 62 ALDGLMGQAADAAGIQFRLLNRKKGPAVRGPRTQADRQLYKNKIQQLLQEQDNLILIEDE 121 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + N +S +V++ I + VVLTTGTFLRG++HIG PAGRMG+ S L Sbjct: 122 VIDLIVKDNRVSGVVLKKQGSIFSNAVVLTTGTFLRGLVHIGNKTWPAGRMGEKSSIQLA 181 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + + GRLKTGTPARL+ KTI W+K KQ ADE +PFSF+T+KI QIEC IT Sbjct: 182 ERLKNYSINLGRLKTGTPARLNKKTIFWNKLSKQQADEDPVPFSFLTEKIEQPQIECAIT 241 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 RTN +TH+II ENI SA+YSG I+ GPRYCPSIEDKI++FG+R+GHQIFLEPEGL + Sbjct: 242 RTNEKTHQIIRENIHKSALYSGAIEGLGPRYCPSIEDKIIKFGDRDGHQIFLEPEGLENN 301 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNG+ST+LPEEIQ F+RTI GLE + I++PGYAIEYD+++P++LF TLE + + GL Sbjct: 302 TIYPNGLSTSLPEEIQLSFLRTIEGLENIEILQPGYAIEYDFVDPRQLFKTLELRSLPGL 361 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 FLAGQINGTTGYEEAAAQGL+AG+N+ARK L+ I SR+ +YIGVM+DDL +GV EP Sbjct: 362 FLAGQINGTTGYEEAAAQGLLAGLNAARKVGGLEEIILSRSTAYIGVMVDDLILRGVCEP 421 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R+SLR DNAD RLTP+ + G + + R + + + R + + L L Sbjct: 422 YRMFTSRAEFRLSLRADNADTRLTPLAQEWGIVSQTRWSCYQQKQHHLDQARLMCQKLFL 481 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 T + +DG R+AY+ L+YP ++ L P + ++E L+IE+ YA Sbjct: 482 TPNEAFVHGLQINRDGVRRSAYDLLAYPHMNVARLAYFWPQLHSIDAKIVEALEIEAQYA 541 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y RQ + ++ +E IP ++ + LSNELK K+ + P ++ A KI+GMTP Sbjct: 542 VYLKRQTQDIIALQRDEHLEIPSSLNFQEISGLSNELKTKIQQISPRSIADAQKIDGMTP 601 Query: 604 AALNLLLIYIKKN 616 AAL+L+L YI++ Sbjct: 602 AALSLILTYIQRQ 614 >gi|13473775|ref|NP_105343.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Mesorhizobium loti MAFF303099] gi|21263678|sp|Q98DZ1|MNMG_RHILO RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|14024526|dbj|BAB51129.1| glucose inhibited division protein A; GidA [Mesorhizobium loti MAFF303099] Length = 623 Score = 718 bits (1854), Expect = 0.0, Method: Compositional matrix adjust. Identities = 348/609 (57%), Positives = 454/609 (74%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+V+GGGHAGCEAA+ AA+ GA TAL+T + TIG MSCNPAIGGLGKGHLVREIDA+ Sbjct: 5 YDVVVVGGGHAGCEAASAAARAGAKTALVTLRFDTIGVMSCNPAIGGLGKGHLVREIDAM 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGLMGRVADAAGIQFR+LN +KGPAVRGPRTQADR+LYRLAMQ I Q +LDV++GEV Sbjct: 65 DGLMGRVADAAGIQFRLLNRRKGPAVRGPRTQADRKLYRLAMQEAIRQQNDLDVVEGEVL 124 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 F + I+++++ + C VVLTTGTFLRG+IHIG+ KI AGRM + S L + Sbjct: 125 DFEINEGRITAVLLAGGRRLACGAVVLTTGTFLRGLIHIGEKKIVAGRMNEQASLGLSAT 184 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + F GRLKTGTP RLDGKTI W E Q ADE +PFS M+D+IT QIECGITRT Sbjct: 185 MDRAGFKLGRLKTGTPPRLDGKTIDWASLESQAADEDPVPFSLMSDRITTPQIECGITRT 244 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 TH +I N+ SA+YSG I+ GPRYCPSIEDKIV+FG+R+GHQIFLEPEGL+ D V Sbjct: 245 TSATHELIRANLGRSAMYSGSIEGVGPRYCPSIEDKIVKFGDRDGHQIFLEPEGLDDDTV 304 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YPNGIST+LP+++Q + ++TIPGLE+ +++PGYAIEYD+++P+EL TLETK+I+GLFL Sbjct: 305 YPNGISTSLPQDVQLEILKTIPGLERATMLQPGYAIEYDHVDPRELHQTLETKRIAGLFL 364 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAA QGL+AG+N+AR++ + I SRT++YIGVM+DDLTS+G+ EPYR Sbjct: 365 AGQINGTTGYEEAAGQGLLAGLNAARRAAGGEQIVLSRTEAYIGVMVDDLTSRGISEPYR 424 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAE+R+SLR DNAD RLTP+ KLG +R +R+ +Q + R L +S+ +T Sbjct: 425 MFTSRAEFRLSLRADNADERLTPLAAKLGIASVQRMQRYGDVMQRLDAARELARSVAMTP 484 Query: 486 KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAY 545 + + +DG R+ YE L+YPD + L + P + ERL+ E+ Y+ Y Sbjct: 485 NEAARQGLEINRDGVRRSGYELLAYPDVDVAWLARVEPKFAAIDAKTAERLETEAKYSVY 544 Query: 546 TGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAA 605 RQ + +I+ EE RLIP+ D++ +P LSNELK+K+ +P ++ A ++EGMTPAA Sbjct: 545 LDRQKSDVAQIRHEESRLIPETVDFAGVPGLSNELKQKMQARRPRSIADAQRMEGMTPAA 604 Query: 606 LNLLLIYIK 614 L +++ +++ Sbjct: 605 LAIIVAHVR 613 >gi|299133194|ref|ZP_07026389.1| glucose inhibited division protein A [Afipia sp. 1NLS2] gi|298593331|gb|EFI53531.1| glucose inhibited division protein A [Afipia sp. 1NLS2] Length = 624 Score = 717 bits (1851), Expect = 0.0, Method: Compositional matrix adjust. Identities = 345/613 (56%), Positives = 435/613 (70%), Gaps = 1/613 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 + DVIV+GGGHAGCEAAA +A+ GA TAL+TH+ +TIG+MSCNPAIGGLGKGHLVREIDA Sbjct: 4 TLDVIVVGGGHAGCEAAAASARFGAKTALLTHRFATIGAMSCNPAIGGLGKGHLVREIDA 63 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGR+AD GIQFRVLN +KGPAVRGPR Q DR LY AMQ EI NL VI+GE Sbjct: 64 LDGLMGRMADRGGIQFRVLNRRKGPAVRGPRAQIDRALYATAMQGEIRETPNLTVIEGEA 123 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E I+ + + D C VV+TTGTFLRG+IH+G+ PAGR+ ++P+ L Sbjct: 124 DELLLENGRIAGLKLADGREFACRAVVITTGTFLRGIIHLGEKNWPAGRIDEAPAVGLSG 183 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 SF + F GRLKTGTPARLDG TI WD E+Q D+ PFS +TDKIT Q+ECGITR Sbjct: 184 SFERIGFTLGRLKTGTPARLDGTTIDWDAVERQPGDDPAEPFSTLTDKITIPQVECGITR 243 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T TH +I N+ S +YSG IKS GPRYCPSIEDKIVRFG+R+ HQ+FLEPEGL Sbjct: 244 TTEATHELIRANVHRSPMYSGQIKSTGPRYCPSIEDKIVRFGDRDSHQVFLEPEGLTDST 303 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LPEE+Q + TIPGLE+ +IRPGYAIEYD+++P+EL PTLETK++ GLF Sbjct: 304 VYPNGISTSLPEEVQKAILTTIPGLERTRMIRPGYAIEYDHVDPRELAPTLETKRVPGLF 363 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEA AQGLVAG+N+AR + + F R D Y+GVMIDDLTS+G+ EPY Sbjct: 364 LAGQINGTTGYEEAGAQGLVAGLNAARMAGGGEGAVFDRADGYLGVMIDDLTSRGITEPY 423 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR++LR DNAD RLT G+ LG +G RR+ FA +Q N + KSL LT Sbjct: 424 RMFTSRAEYRLTLRADNADRRLTERGIALGIVGSRRETSFAAKMQALNAAKDAAKSLSLT 483 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 +S +DG+ R+A+E L+YP+ ++ I P + + E ++I++ Y Sbjct: 484 PTEGIRHGLSLNRDGQRRSAFELLAYPEIGWADVARIWPQLAEVPPAIAEHVEIDAKYDV 543 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + + +E L+ DY+ +P LSNE ++KL +P + QA++IE MTPA Sbjct: 544 YLARQAADVSAFRRDEA-LVLTGVDYAEVPGLSNEARQKLQTAQPRTIGQAARIEAMTPA 602 Query: 605 ALNLLLIYIKKNT 617 AL +L Y+++ + Sbjct: 603 ALGILAAYLRRQS 615 >gi|319406397|emb|CBI80038.1| glucose inhibited division protein A [Bartonella sp. AR 15-3] Length = 622 Score = 715 bits (1846), Expect = 0.0, Method: Compositional matrix adjust. Identities = 347/613 (56%), Positives = 443/613 (72%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 +SYDVIVIGGGHAGCEAA+ +A++GA TAL+T++ ST+G+MSCNPAIGGLGKGHLVREID Sbjct: 2 QSYDVIVIGGGHAGCEAASASARVGARTALVTYQVSTLGTMSCNPAIGGLGKGHLVREID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDGLMG+ ADAAGIQFR+LN +KGPAVRGPRTQADRELY+ +Q+ + Q+NL +I+ E Sbjct: 62 ALDGLMGQAADAAGIQFRLLNRRKGPAVRGPRTQADRELYKNKIQQLLQKQDNLILIEDE 121 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + + IS + ++ I + VVLTTGTFLRG+IHIG PAGRMG+ S L Sbjct: 122 VIDLIVKDDHISGVFLKKKGKILSNAVVLTTGTFLRGLIHIGNKIWPAGRMGERASIQLA 181 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + RLKTGTPARL KTI W+K KQ ADE IPFS +T+KI QIEC IT Sbjct: 182 EHLENYGVHLRRLKTGTPARLSKKTISWNKLPKQQADEEPIPFSLLTEKIEQPQIECAIT 241 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 RTN +TH+II ENI SA+YSG I+ GPRYCPSIEDKI++FG+R+GHQIFLEPEGL+ D Sbjct: 242 RTNEKTHQIIRENIHKSALYSGAIEGLGPRYCPSIEDKIIKFGDRDGHQIFLEPEGLDND 301 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LPEEIQ F+RTI GLE V I++PGYAIEYD+++P++L TLE K + GL Sbjct: 302 TIYPNGISTSLPEEIQFSFLRTIEGLENVEILQPGYAIEYDFVDPRQLSKTLELKSLPGL 361 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 FLAGQINGTTGYEEAAAQGL+AG+N+AR+ L+ I SR+ +YIGVMIDDL S+G+ EP Sbjct: 362 FLAGQINGTTGYEEAAAQGLLAGLNAARQVGGLEEIILSRSTAYIGVMIDDLVSRGICEP 421 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R+SLR DNAD RLTP+ K G + + R R+ + Q + R + + L L Sbjct: 422 YRMFTSRAEFRLSLRADNADTRLTPLAQKWGIVSQIRWIRYQQKQQLLDQARLMCQKLFL 481 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 T S + DG R+AY+ L+ P S+ L P R + E L+IE+ YA Sbjct: 482 TPNEASIHGLQINHDGIRRSAYDLLARPHMSVARLAHFWPQLRSIDAKTAEALEIEAQYA 541 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y RQ + ++ +E+ IP ++ + LSNELK K+ + P ++ A KI+GMTP Sbjct: 542 VYLERQTQDIIALQRDERLEIPSSLNFQEISGLSNELKAKIQQISPRSIADAQKIDGMTP 601 Query: 604 AALNLLLIYIKKN 616 AAL+L+L YI++ Sbjct: 602 AALSLILTYIQRQ 614 >gi|319780613|ref|YP_004140089.1| glucose inhibited division protein A [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166501|gb|ADV10039.1| glucose inhibited division protein A [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 626 Score = 714 bits (1844), Expect = 0.0, Method: Compositional matrix adjust. Identities = 354/614 (57%), Positives = 450/614 (73%), Gaps = 1/614 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M NR YDV+V+GGGHAGCEAA+ AA+ GA TAL+T + TIG MSCNPAIGGLGKGHLVR Sbjct: 1 MTNR-YDVVVVGGGHAGCEAASAAARAGARTALVTLRFDTIGVMSCNPAIGGLGKGHLVR 59 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDA+DGLMGRVADAAGIQFR+LN +KGPAVRGPRTQADR+LYRLAMQ I Q +LDV+ Sbjct: 60 EIDAMDGLMGRVADAAGIQFRLLNRRKGPAVRGPRTQADRKLYRLAMQEAIRQQNDLDVV 119 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 +GEV F I+++++ D + C VVLTTGTFLRG+IHIG+ KI AGRM + S Sbjct: 120 EGEVLDFEIADGQITAVLLADGRRLVCGAVVLTTGTFLRGLIHIGEKKIVAGRMNEQASL 179 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 L + + F GRLKTGTP RLDG+TI W E Q AD +PFS MTD IT QI C Sbjct: 180 GLSATMDRAGFKLGRLKTGTPPRLDGRTIDWASLESQAADADPVPFSLMTDCITTPQINC 239 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 GITRT TH +I N+ SA+YSG I+ GPRYCPSIEDKIV+FG+R+GHQIFLEPEGL Sbjct: 240 GITRTTTATHELIRANLGRSAMYSGSIEGVGPRYCPSIEDKIVKFGDRDGHQIFLEPEGL 299 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + D VYPNGIST+LPE++Q ++TI GLE+ +++PGYAIEYD+++P+EL TLETK+I Sbjct: 300 DDDTVYPNGISTSLPEDVQLDILKTITGLERAVMLQPGYAIEYDHVDPRELHQTLETKRI 359 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 SGLFLAGQINGTTGYEEAA QGL+AG+N+AR++ + I SRT++YIGVM+DDLTS+G+ Sbjct: 360 SGLFLAGQINGTTGYEEAAGQGLLAGLNAARRAAGSEQIVLSRTEAYIGVMVDDLTSRGI 419 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAE+R+SLR DNAD RLTP+ KLG +R +R+ +Q + R L KS Sbjct: 420 AEPYRMFTSRAEFRLSLRADNADERLTPVAAKLGIASAQRMRRYGDVMQNLDEARELAKS 479 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 L +T + + +DG R+ YE LSYPD + L I ERL+ E+ Sbjct: 480 LTMTPNEAARHGLEINRDGVRRSGYELLSYPDVDVAWLGRIDSRFAAIDGKTAERLETEA 539 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y+ Y RQ + +I+ EE RLIP+ D++ +P LSNELK+K+ +P ++ A ++EG Sbjct: 540 KYSVYLDRQKTDVAQIRHEESRLIPETVDFAGVPGLSNELKQKMQARRPRSIADAQRMEG 599 Query: 601 MTPAALNLLLIYIK 614 MTPAAL +++ +++ Sbjct: 600 MTPAALAIIVAHVR 613 >gi|121602359|ref|YP_988350.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bartonella bacilliformis KC583] gi|166222909|sp|A1UQU7|MNMG_BARBK RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|120614536|gb|ABM45137.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bartonella bacilliformis KC583] Length = 622 Score = 714 bits (1844), Expect = 0.0, Method: Compositional matrix adjust. Identities = 343/613 (55%), Positives = 439/613 (71%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 +SYDVI++GGGHAGCEAA+ +A+ GA TAL+T++ S +G+MSCNPAIGGLGKGHLVREID Sbjct: 2 QSYDVIIVGGGHAGCEAASASARTGARTALVTYRLSDMGTMSCNPAIGGLGKGHLVREID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDGLMGR AD AGIQFR+LN +KGPAVRGPRTQADR+LY+ A+Q+ + Q+NL +I+ E Sbjct: 62 ALDGLMGRAADFAGIQFRLLNRRKGPAVRGPRTQADRQLYKKAIQKLLREQDNLFIIEDE 121 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + N +S + +++ I VVLTTGTFL G+IHIG PAGRMG+ S L Sbjct: 122 VVDIIVKNNRVSGVFLKNQGNIFSGAVVLTTGTFLNGLIHIGDKTWPAGRMGEQASVQLA 181 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + GRLKTGTPARL KTI WD KQ ADE +PFSF+T+KI QIEC IT Sbjct: 182 ERLKNYGISFGRLKTGTPARLSKKTIRWDVLPKQQADEDPVPFSFLTEKIKQPQIECAIT 241 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 RTN +TH II ENI SA+YSG I+ GPRYCPSIEDKI++FGER+GHQIFLEPEGL D Sbjct: 242 RTNAQTHHIISENIHRSALYSGAIEGVGPRYCPSIEDKIIKFGERDGHQIFLEPEGLEDD 301 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 V+YPNGIST+LPE++Q ++TI GLE VN+++PGYAIEYD+INP+ L TLE + + GL Sbjct: 302 VIYPNGISTSLPEDVQISLLKTIEGLENVNVLQPGYAIEYDFINPQYLSKTLELRSLPGL 361 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 FLAGQINGTTGYEEAAAQGL+AG+N+AR+ LD I SR+ +YIGVMIDDL S+GV EP Sbjct: 362 FLAGQINGTTGYEEAAAQGLLAGLNAARQVGGLDEIILSRSTAYIGVMIDDLISRGVCEP 421 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R+SLR DNAD RLTP+ + G + +R + Q + RS+ + L L Sbjct: 422 YRMFTSRAEFRLSLRADNADARLTPLAQEWGIVSHKRWTCYQNKQQRLDHARSICQKLFL 481 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 T S+ + DG R+AY LSYP+ ++ L P + +E L+IE+ YA Sbjct: 482 TPNEASAHGLQINNDGVRRSAYSLLSYPNMNVARLTDFWPQLHSIDAKTVESLEIEAQYA 541 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y RQ + ++ +E IP + ++ LSNELK K+ + P ++ A KI+GMTP Sbjct: 542 VYLERQKQDIAALQRDESLEIPSSLNIQAIYGLSNELKTKIQKISPRSIADAQKIDGMTP 601 Query: 604 AALNLLLIYIKKN 616 AAL+L++ YI++ Sbjct: 602 AALSLIITYIQRQ 614 >gi|209883524|ref|YP_002287381.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Oligotropha carboxidovorans OM5] gi|254811516|sp|B6JAJ1|MNMG_OLICO RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|209871720|gb|ACI91516.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Oligotropha carboxidovorans OM5] Length = 624 Score = 713 bits (1841), Expect = 0.0, Method: Compositional matrix adjust. Identities = 338/616 (54%), Positives = 443/616 (71%), Gaps = 1/616 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +++DVIV+GGGHAGCEAAA +A+LGA TAL+TH+ +T+G+MSCNPAIGGLGKGHLVRE Sbjct: 1 MRKTFDVIVVGGGHAGCEAAAASARLGAETALLTHRFATVGAMSCNPAIGGLGKGHLVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDALDGLMGR+AD GIQFRVLN +KGPAVRGPR Q DR LY AMQ EI + +L VI+ Sbjct: 61 IDALDGLMGRMADTGGIQFRVLNRRKGPAVRGPRAQIDRALYAAAMQAEIRATPHLSVIE 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 GE + + I+ + + D C VV+TTGTFLRG+IH+G+ PAGR+ ++P+ Sbjct: 121 GEADALVLKDDRIAGLKLADGREFSCRAVVITTGTFLRGIIHLGETSWPAGRINEAPAMG 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L SF + F GRLKTGTPARLDG TI W E+Q D+ PFS +T++IT Q+ECG Sbjct: 181 LSKSFEQIGFTLGRLKTGTPARLDGTTIDWAAVERQPGDDPAEPFSTLTEEITTPQVECG 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 ITRT TH +I EN+ S +YSG I+S GPRYCPSIEDKIVRFG+R+ HQIFLEPEGL Sbjct: 241 ITRTTTATHAVIRENVHRSPLYSGQIQSIGPRYCPSIEDKIVRFGDRDSHQIFLEPEGLK 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 VYPNGIST+LPEE+Q + TIPGLE+ +IRPGYAIEYD+++P+EL PTLET+++ Sbjct: 301 DTTVYPNGISTSLPEEVQKAILTTIPGLERTRMIRPGYAIEYDHVDPRELEPTLETRRVP 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLFLAGQINGTTGYEEAAAQGLVAG+N+AR + + + F R D Y+GVMIDDLTS+GV Sbjct: 361 GLFLAGQINGTTGYEEAAAQGLVAGLNAARTAGGKEGVIFDRADGYLGVMIDDLTSRGVT 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR++LR DNAD RLT G+ LG +G RQ +F ++ + + KSL Sbjct: 421 EPYRMFTSRAEYRLTLRADNADQRLTWRGLALGVVGFARQAQFDAKMRALDAAKEAAKSL 480 Query: 482 VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 LT ++ +DG+ R+A+E L+YP+ ++ I P + + + E ++I++ Sbjct: 481 SLTPTEGIRHGLALNRDGQRRSAFELLAYPEIGWADVARIWPQLAEVTPDIAEHVEIDAK 540 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y RQ + + +E L+ DY+ +P LSNE ++KL +P + QA++IE M Sbjct: 541 YDVYLARQAADVSAFRRDEA-LVLSGVDYADVPGLSNEARQKLQKAQPRTIGQAARIEAM 599 Query: 602 TPAALNLLLIYIKKNT 617 TPAAL +L Y+++ + Sbjct: 600 TPAALGILTAYLRRRS 615 >gi|148251783|ref|YP_001236368.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Bradyrhizobium sp. BTAi1] gi|166222911|sp|A5E8G8|MNMG_BRASB RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|146403956|gb|ABQ32462.1| Glucose-inhibited division protein A [Bradyrhizobium sp. BTAi1] Length = 625 Score = 712 bits (1839), Expect = 0.0, Method: Compositional matrix adjust. Identities = 337/620 (54%), Positives = 435/620 (70%), Gaps = 1/620 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIGGGHAGCEAA +A++GA TAL+TH +TIG+MSCNPAIGGLGKGHLVRE+DA Sbjct: 7 SYDVIVIGGGHAGCEAAEASARMGARTALVTHHFATIGAMSCNPAIGGLGKGHLVREVDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRVADA GIQFRVLN +KGPAVRGPR QADR+LY AMQ I NL V++GE Sbjct: 67 LDGLMGRVADAGGIQFRVLNRRKGPAVRGPRAQADRKLYAAAMQAAIRETANLTVVEGEA 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 I+ + + D + C +V+TTGTFLRG+IH+G+ PAGR+G++P+ L Sbjct: 127 DQLIVADGQITGLRLADGRPLACGAIVITTGTFLRGLIHLGEKTWPAGRVGEAPALGLSQ 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S F GRLKTGTP RLDG TI W E Q D+ PFS +T IT QI+CGITR Sbjct: 187 SLEAIGFRLGRLKTGTPPRLDGTTIDWSAVEMQPGDDPPEPFSVLTQTITTPQIQCGITR 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T TH +I N+ S +YSG IKS GPRYCPS+EDKIVRFG+R+GHQIFLEPEGL+ Sbjct: 247 TTTATHDVIRANVHRSPMYSGQIKSTGPRYCPSVEDKIVRFGDRDGHQIFLEPEGLDDTT 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LPEE+Q + TIPGLE+V +IRPGYAIEYD+++P+EL PTL+TK++ GLF Sbjct: 307 VYPNGISTSLPEEVQLALLPTIPGLERVRMIRPGYAIEYDHVDPRELEPTLQTKRMRGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEAAAQGLVAG+N+A + + I F R D Y+GVMIDDL ++G+ EPY Sbjct: 367 LAGQINGTTGYEEAAAQGLVAGLNAALTAGGGEPIVFDRADGYVGVMIDDLVTRGITEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR++LR DNAD RLT G+ LGC+G R + + RSL +S+ +T Sbjct: 427 RMFTSRAEYRLTLRADNADQRLTDKGIALGCVGGDRARFHRTKMDALEAARSLARSVTIT 486 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + ++ +DG+ R+A+E ++YP+ + I P+ + L+I++ Y Sbjct: 487 PNEAAKYGLTLNRDGQRRSAFELMAYPEIGFSEVRGIWPELGTIGPAIAVHLEIDAKYDV 546 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + + +E L+ D DY+ +P LSNE + KL+ +P+ + QA +I+GMTPA Sbjct: 547 YVRRQSEDVDAFRRDEG-LVLGDIDYALVPGLSNEARAKLTAARPWTIGQAGRIDGMTPA 605 Query: 605 ALNLLLIYIKKNTVKLNEIV 624 AL +L Y+++ + +V Sbjct: 606 ALGILAAYLRREARRSKAMV 625 >gi|260467200|ref|ZP_05813377.1| glucose inhibited division protein A [Mesorhizobium opportunistum WSM2075] gi|259029053|gb|EEW30352.1| glucose inhibited division protein A [Mesorhizobium opportunistum WSM2075] Length = 629 Score = 712 bits (1837), Expect = 0.0, Method: Compositional matrix adjust. Identities = 338/602 (56%), Positives = 446/602 (74%) Query: 15 HAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVAD 74 HAGCEAA+ AA+ GA TAL+T + TIG MSCNPAIGGLGKGHLVREIDA+DGLMGRVAD Sbjct: 14 HAGCEAASAAARAGARTALVTLRFDTIGVMSCNPAIGGLGKGHLVREIDAMDGLMGRVAD 73 Query: 75 AAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNII 134 AAGIQFR+LN +KGPAVRGPRTQADR+LYRLAMQ I Q +LDVI+ EV F E+ I Sbjct: 74 AAGIQFRLLNRRKGPAVRGPRTQADRKLYRLAMQEAIRQQNDLDVIEAEVLDFEIEEGRI 133 Query: 135 SSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTG 194 +++++ + + C VVLTTGTFLRG+IHIG+ KI AGRM + S L + + F G Sbjct: 134 AAVLLANGRRLACGAVVLTTGTFLRGLIHIGEKKIVAGRMNEQASLGLSATMSRAGFALG 193 Query: 195 RLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTNLETHRIIM 254 RLKTGTP RLDG+TI W E Q AD+ +PFS MTD+I QI+CGITRT TH +I Sbjct: 194 RLKTGTPPRLDGRTIDWASLESQAADDDPVPFSLMTDRIETPQIDCGITRTTTATHELIR 253 Query: 255 ENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTAL 314 N+ SA+YSG I+ GPRYCPSIEDKIV+FG+R+GHQIFLEPEGL+ D VYPNGIST+L Sbjct: 254 ANLARSAMYSGSIEGVGPRYCPSIEDKIVKFGDRDGHQIFLEPEGLDDDTVYPNGISTSL 313 Query: 315 PEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTG 374 PE++Q ++TIPGLE+ +++PGYAIEYD+++P+EL TLETK+++GLFLAGQINGTTG Sbjct: 314 PEDVQLDILKTIPGLERAVMLQPGYAIEYDHVDPRELSQTLETKRVAGLFLAGQINGTTG 373 Query: 375 YEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYR 434 YEEAA QGL+AG+N+AR+++ + I SRT++YIGVM+DDLTS+G+ EPYRMFTSRAE+R Sbjct: 374 YEEAAGQGLLAGLNAARRASGGEQIVLSRTEAYIGVMVDDLTSRGISEPYRMFTSRAEFR 433 Query: 435 ISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSIS 494 +SLR DNAD RLTP+ KLG +R +R+ ++ + R+L +L +T + + Sbjct: 434 LSLRADNADERLTPLAAKLGIASAQRMQRYGDAMRRLDEARALATALTMTPNEAARHGLE 493 Query: 495 FKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAK 554 +DG R+ YE L+YPD + L + P + ERL+ E+ Y+ Y RQ + Sbjct: 494 INRDGVRRSGYELLAYPDVDVAWLARVEPGFGAVDAKTAERLETEAKYSVYLDRQKTDVA 553 Query: 555 EIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIK 614 +I+ EE RLIP+ D++ +P LSNELK+K+ +P ++ A ++EGMTPAAL +++ +++ Sbjct: 554 QIRHEESRLIPETVDFAGVPGLSNELKQKMQARRPRSIADAQRMEGMTPAALAIIVAHVR 613 Query: 615 KN 616 + Sbjct: 614 HH 615 >gi|319409464|emb|CBI83113.1| glucose inhibited division protein A [Bartonella schoenbuchensis R1] Length = 622 Score = 710 bits (1833), Expect = 0.0, Method: Compositional matrix adjust. Identities = 342/611 (55%), Positives = 442/611 (72%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAGCEAA+ +A++GA TAL+T++ S +G+MSCNPAIGGLGKGHLVREIDAL Sbjct: 4 YDVIVVGGGHAGCEAASASARVGAKTALVTYQISELGTMSCNPAIGGLGKGHLVREIDAL 63 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLMG+ ADAAGIQFR+LN +KGPAVRGPRTQADR+LY+ A+Q + QENL +I+ EV Sbjct: 64 GGLMGQAADAAGIQFRLLNRRKGPAVRGPRTQADRQLYKRAIQGFLQKQENLKLIEDEVI 123 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + +S + ++ I VVLTTGTFLRG+IHIG AGRMG+ S L Sbjct: 124 DLIVENDHVSGVCLKKQGNIFSKAVVLTTGTFLRGLIHIGDKTWHAGRMGEQSSMQLAER 183 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 ++D GRLKTGTP RL KTI WD KQ ADE +PFSF+T+KI QIEC ITRT Sbjct: 184 LKEYDIKLGRLKTGTPPRLSKKTIRWDILPKQQADEYPVPFSFLTEKIEQPQIECAITRT 243 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N +TH+II ENI SA+YSG I+ GPRYCPSIEDKI++FGER+GHQIFLEPEGL++D++ Sbjct: 244 NTQTHQIISENIHRSALYSGAIEGLGPRYCPSIEDKIIKFGERDGHQIFLEPEGLDSDII 303 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YPNGIST+LPE+IQ F++TI GLE + +++PGYAIEYD+++PK+L TLE K + GLFL Sbjct: 304 YPNGISTSLPEDIQISFLKTIEGLENITVLQPGYAIEYDFVDPKQLTRTLELKSLPGLFL 363 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAAAQGL+AG+N+AR+ L I SR+ +YIGVM+DDL S+GV EPYR Sbjct: 364 AGQINGTTGYEEAAAQGLLAGLNAARQVGGLKEIILSRSMAYIGVMVDDLVSRGVCEPYR 423 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAE+R+SLR DNAD RLTP+ + G I + R + + + RS+ + L LT Sbjct: 424 MFTSRAEFRLSLRADNADARLTPLAQQWGIISDTRWNLYQHKQKCLDQARSICQKLFLTP 483 Query: 486 KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAY 545 S+ + DG R+AY+ LSYP +I+ L S P + + +E L+IE+ YA Y Sbjct: 484 NEASAHGLHINHDGVRRSAYDLLSYPGMNIERLSSFWPQLQSIDAKTVETLEIEAQYAVY 543 Query: 546 TGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAA 605 RQ + ++ +E+ IP D ++ LSNELK K+ P ++ A KI+GMTPAA Sbjct: 544 LERQAQDIAVLQRDERLEIPASLDIQAISGLSNELKTKIQQSSPRSIADAQKIDGMTPAA 603 Query: 606 LNLLLIYIKKN 616 L+L++ I++ Sbjct: 604 LSLIITSIQRQ 614 >gi|154245778|ref|YP_001416736.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Xanthobacter autotrophicus Py2] gi|154159863|gb|ABS67079.1| glucose inhibited division protein A [Xanthobacter autotrophicus Py2] Length = 626 Score = 707 bits (1824), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/599 (56%), Positives = 439/599 (73%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+GGGHAGCEAAA +A+ GA TAL+TH STIG+MSCNPAIGGLGKGHLVREIDA Sbjct: 11 AFDVIVVGGGHAGCEAAAASARTGARTALLTHSRSTIGAMSCNPAIGGLGKGHLVREIDA 70 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRVAD GIQFRVLN +KGPAVRGPR QADR+LY AMQ + +Q+ L +++GE Sbjct: 71 LDGLMGRVADQGGIQFRVLNRRKGPAVRGPRAQADRKLYAPAMQAALAAQDGLTIVEGEA 130 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 I+ + + D + C VVLTTGTFL G+IH+G++ PAGRMG+ P+ L Sbjct: 131 DDLLVAGGGIAGVRLADGRELSCGAVVLTTGTFLNGLIHMGEVSYPAGRMGEKPALGLSP 190 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + + F GRLKTGTPARLDG+TI W E Q D+R PFS +T + NRQ+ECGITR Sbjct: 191 ALARLGFSLGRLKTGTPARLDGRTIDWASLEMQPGDDRPEPFSALTTFLPNRQVECGITR 250 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T TH +I N+ SA+YSG I+S GPRYCPSIEDKIVRFG+R+GHQIFLEPEGL+ Sbjct: 251 TTDATHELIRANLSRSAMYSGRIESSGPRYCPSIEDKIVRFGDRDGHQIFLEPEGLDDPT 310 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNG+ST+LP E+Q F+RTIPGLE+V ++RPGYAIEYD+++P+EL PTLE K+++GLF Sbjct: 311 IYPNGLSTSLPAEVQTAFLRTIPGLEQVAVLRPGYAIEYDHVDPRELAPTLEAKRVAGLF 370 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEAAAQGL+AG+N+AR++ D F R ++Y+GVM+DDL ++GV EPY Sbjct: 371 LAGQINGTTGYEEAAAQGLLAGLNAARRAGGADGTVFDRAEAYLGVMVDDLVTRGVSEPY 430 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR++LR DNAD RLT G LG +G R FA+ R+L +SL LT Sbjct: 431 RMFTSRAEYRLTLRADNADQRLTRHGEALGLVGAERSAHFARRSAALEEARALAESLSLT 490 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + +S +DG+ RTA++ L+YPD + L +I P V E+++I++ YA Sbjct: 491 PTEGARHGLSVNRDGQRRTAFDLLAYPDIDMVRLGAIWPQLAGLDPAVAEQVEIDAKYAV 550 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y RQ + ++ +E+ +P+D Y+ LP LSNELK+KL+ ++P + QA ++EGMTP Sbjct: 551 YLHRQAADISMLRRDEQLSLPEDLSYADLPGLSNELKQKLARIRPRTVGQAGRMEGMTP 609 >gi|49476317|ref|YP_034358.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bartonella henselae str. Houston-1] gi|81170522|sp|Q6G1K9|MNMG_BARHE RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|49239125|emb|CAF28429.1| Glucose inhibited division protein a [Bartonella henselae str. Houston-1] Length = 622 Score = 706 bits (1822), Expect = 0.0, Method: Compositional matrix adjust. Identities = 344/611 (56%), Positives = 441/611 (72%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+VIGGGHAGCEAA +A+ GA TALITHK S +G+MSCNPAIGGLGKGHLVREIDA Sbjct: 4 YDVVVIGGGHAGCEAAYASARAGAQTALITHKISALGTMSCNPAIGGLGKGHLVREIDAF 63 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGLMGR ADAAGIQFR+LN +KGPAVRGPR QADR+LY+ A+Q+ + Q+NL +I+ EV Sbjct: 64 DGLMGRAADAAGIQFRLLNRRKGPAVRGPRAQADRQLYKEAIQKLLQKQDNLILIEDEVI 123 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + IS ++++ ++ VVLTTGTFL G IHIG AGRMG+ S L Sbjct: 124 DLIVKDKSISGVILKKQGILPSGAVVLTTGTFLNGFIHIGDKTWAAGRMGEQSSIKLAER 183 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + + GRLKTGTPARL KTI W+ KQ ADE +PFS +T+KI QIEC ITRT Sbjct: 184 LKSYGINLGRLKTGTPARLSKKTIRWECLPKQQADENPVPFSLLTEKIEQPQIECAITRT 243 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N +TH+II ENI SA+YSG+I+ GPRYCPSIEDKIV+FGER+GHQIFLEPEGLN D + Sbjct: 244 NAQTHQIIRENIHRSALYSGNIEGLGPRYCPSIEDKIVKFGERDGHQIFLEPEGLNDDTI 303 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YPNG+ST+LPE++Q ++TI GLE V I++ GYAIEYD++NP++L TLE + + GLFL Sbjct: 304 YPNGLSTSLPEDVQVSLLKTIEGLENVTILQSGYAIEYDFVNPQQLTKTLELRSLPGLFL 363 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAAAQGL+AG+N+ARK LD I SR+ +YIGVM+DDL S+GV EPYR Sbjct: 364 AGQINGTTGYEEAAAQGLLAGLNAARKVGGLDEILISRSTAYIGVMVDDLVSRGVCEPYR 423 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAE+R+SLR DNAD RLTP+ +LG + + R + + K Q + RSL + L LT Sbjct: 424 MFTSRAEFRLSLRSDNADARLTPLAQQLGIVSKLRWECYQKKQQRLDQARSLCQELFLTP 483 Query: 486 KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAY 545 S+ + DG R+AY+ L+YP SI+ L I P + S +E ++IE+ YA Y Sbjct: 484 NQASAHGLQVNHDGIRRSAYDLLAYPHMSIERLSHIWPQLQSIDSKTVESVEIEAQYAVY 543 Query: 546 TGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAA 605 +Q + ++ +E+ IP D ++ LSNELK K+ + P ++ A KI+GMTPAA Sbjct: 544 LEKQAQDILALQRDERLEIPSSLDVQAISGLSNELKTKIQKISPRSIADAQKIDGMTPAA 603 Query: 606 LNLLLIYIKKN 616 L+L++ YI++ Sbjct: 604 LSLIITYIQRQ 614 >gi|49474828|ref|YP_032870.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bartonella quintana str. Toulouse] gi|81170523|sp|Q6FYB9|MNMG_BARQU RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|49240332|emb|CAF26814.1| Glucose inhibited division protein a [Bartonella quintana str. Toulouse] Length = 622 Score = 705 bits (1820), Expect = 0.0, Method: Compositional matrix adjust. Identities = 340/611 (55%), Positives = 442/611 (72%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV++IGGGHAGCEAA+ +A+ GA TAL+THK S +G+MSCNPAIGGLGKGHLVREIDAL Sbjct: 4 YDVVIIGGGHAGCEAASASARSGACTALVTHKISALGTMSCNPAIGGLGKGHLVREIDAL 63 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGLMGR AD AGIQFR+LN +KGPAVRGPRTQADR+LY+ A+Q+ + Q+NL +I+ E Sbjct: 64 DGLMGRAADIAGIQFRLLNRRKGPAVRGPRTQADRKLYKKAIQKFLQEQDNLILIEDEAV 123 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + N +S +V++ + VVLTTGTFL G+IHIG AGRMG+ S L Sbjct: 124 DLIVKDNCVSGVVLKKQGELFSGAVVLTTGTFLNGLIHIGDKTWAAGRMGEHSSVQLAER 183 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 K+D + GRLKTGTPARL KTI W+ KQ ADE +PFS +T+KI QIEC ITRT Sbjct: 184 LKKYDINLGRLKTGTPARLSKKTINWNCLSKQKADEDPVPFSLLTEKIEQPQIECAITRT 243 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N +TH+II ENI SA+YSG I+ GPRYCPS+EDKIV+FGER+GHQIFLEPEGLN D + Sbjct: 244 NTQTHQIIRENIHRSALYSGMIEGLGPRYCPSVEDKIVKFGERDGHQIFLEPEGLNDDTI 303 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YPNG+ST+LPE++Q +RTI GLE V I++PGYAIEYD++NP++L TLE + + GLFL Sbjct: 304 YPNGLSTSLPEDVQVALLRTIEGLESVKILQPGYAIEYDFVNPQQLTKTLELRSLPGLFL 363 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAAAQGL+AG+N+ARK L+ I SR+ +YIGVM+DDL S+GV EPYR Sbjct: 364 AGQINGTTGYEEAAAQGLLAGLNAARKVGGLNEIIISRSTAYIGVMVDDLVSRGVSEPYR 423 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAE+R+SLR DNAD RLTP+ + G + ++R + + Q + RS+ + L LT Sbjct: 424 MFTSRAEFRLSLRSDNADARLTPLAQQWGIVSQKRWDLYQQKQQRLDQARSICQKLFLTP 483 Query: 486 KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAY 545 S+ + DG R+AY+ L+YP SI+ L + +E L+IE+ YA Y Sbjct: 484 NQASAHGLQVNHDGIRRSAYDLLAYPHMSIERLSHFWQQLQSIDPKTVESLEIEAQYAVY 543 Query: 546 TGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAA 605 +Q + ++ +E+ IP D+ ++ LSNELK K+ + P ++ A KI+GMTPAA Sbjct: 544 LEKQAQDISALQRDERLEIPSSLDFQTISGLSNELKTKIQKISPRSIADAQKIDGMTPAA 603 Query: 606 LNLLLIYIKKN 616 L+L++ YI++ Sbjct: 604 LSLIITYIQRQ 614 >gi|110635799|ref|YP_676007.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Mesorhizobium sp. BNC1] gi|123353088|sp|Q11CN3|MNMG_MESSB RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|110286783|gb|ABG64842.1| glucose inhibited division protein A [Chelativorans sp. BNC1] Length = 622 Score = 704 bits (1818), Expect = 0.0, Method: Compositional matrix adjust. Identities = 338/583 (57%), Positives = 430/583 (73%) Query: 33 LITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVR 92 L+T + TIG MSCNPAIGG+GKG LVRE+DALDGLMGRVADAAGIQFR+LN +KGPAVR Sbjct: 32 LVTMRRDTIGVMSCNPAIGGIGKGQLVREVDALDGLMGRVADAAGIQFRLLNRRKGPAVR 91 Query: 93 GPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVL 152 GPRTQADR+LYR AMQ I QENL VI+ EV E I+ + + +S I C+ VVL Sbjct: 92 GPRTQADRKLYRQAMQAVISEQENLQVIEAEVHTLGMEHGRITHVGLSGDSQINCAAVVL 151 Query: 153 TTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWD 212 TTGTFLRG+IHIG+ KIPAGR+ + + L S F GRLKTGTP RLDG+TI W+ Sbjct: 152 TTGTFLRGLIHIGQKKIPAGRVNEPAAKGLSASMEAAGFKLGRLKTGTPPRLDGRTIEWN 211 Query: 213 KTEKQFADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGP 272 Q ADE +PFS +++KI N QI CGITRT +THRII EN+ SA+YSG I+ GP Sbjct: 212 MLGFQKADEDPVPFSLLSEKIQNPQITCGITRTTTDTHRIIQENLDKSAMYSGQIEGIGP 271 Query: 273 RYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKV 332 RYCPSIEDKIV+FGER+GHQIFLEPEGL+ VYPNG+ST+LPEE+QH F++TIPGL Sbjct: 272 RYCPSIEDKIVKFGERDGHQIFLEPEGLDDHTVYPNGLSTSLPEEVQHAFLKTIPGLANA 331 Query: 333 NIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARK 392 ++++PGYAIEYD+++P+EL P+LET+++ GLFLAGQINGTTGYEEAAAQG++AGIN+A Sbjct: 332 HVLQPGYAIEYDHVDPRELEPSLETRRVRGLFLAGQINGTTGYEEAAAQGVIAGINAASV 391 Query: 393 SNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMK 452 ++ + SRTD+YIGVMIDDL ++GV EPYRMFTSRAE+R+SLR DNAD RLTP ++ Sbjct: 392 ASGSTTVVPSRTDAYIGVMIDDLVTRGVTEPYRMFTSRAEFRLSLRADNADERLTPRAIE 451 Query: 453 LGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPD 512 G + R+ RF K QE + R L K+ LT + I+ QDG R+AY+ LS+ D Sbjct: 452 WGVASKVRRDRFYKAEQELSDARELTKARGLTPNEAARHGIAVNQDGVRRSAYDLLSFAD 511 Query: 513 FSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSS 572 +I+ L +I P+ + ERL+ E+ YA Y RQ+ +A+ ++ EE R IP D+ S Sbjct: 512 INIERLKAIWPELGSIAPKTCERLETEARYAVYLDRQVADAERVRREEGRSIPDGIDFDS 571 Query: 573 LPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 +P LSNELK KL +P L +A +I+GMTPAAL L+L+ I++ Sbjct: 572 VPGLSNELKYKLRQRRPRTLAEAQRIDGMTPAALALILVAIRQ 614 >gi|254459541|ref|ZP_05072957.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rhodobacterales bacterium HTCC2083] gi|206676130|gb|EDZ40617.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rhodobacteraceae bacterium HTCC2083] Length = 619 Score = 704 bits (1816), Expect = 0.0, Method: Compositional matrix adjust. Identities = 330/603 (54%), Positives = 438/603 (72%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M ++DV+VIGGGHAGC+AA +A++G+STAL+T IG MSCNPAIGGLGKGHLVR Sbjct: 1 MKQLNFDVVVIGGGHAGCDAAHASARMGSSTALVTLSKDGIGVMSCNPAIGGLGKGHLVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDA DG+M RVAD AGIQFR+LN +KGPAV+GPR Q+DR +YR M +EI +QENL ++ Sbjct: 61 EIDAFDGVMARVADKAGIQFRLLNRRKGPAVQGPRAQSDRSIYRGEMLKEIETQENLKIV 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 +GE F E + + + D + + CS VVLTTGTFLRGVIHIG + P GRMGD PS Sbjct: 121 EGEAVDFLMEGARVVGVALDDGTQLLCSAVVLTTGTFLRGVIHIGDVSKPGGRMGDKPSI 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 L F GRLKTGTP RLDG+TI WD E Q DE + FSFM+ +T++Q+ C Sbjct: 181 KLAERIDSFRLPFGRLKTGTPPRLDGRTINWDILESQPGDEDPVLFSFMSKGVTSQQVNC 240 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 GIT TN+ TH +I EN+K SA+Y G I GPRYCPSIEDKIVRF ++ HQ+FLEPEG+ Sbjct: 241 GITHTNMRTHVLIEENLKKSAMYGGHIDGIGPRYCPSIEDKIVRFADKTSHQVFLEPEGV 300 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 N VYPNGIST+LPE++Q+ +++TI GLE I++PGYAIEYDY++P+ L L K + Sbjct: 301 NDHTVYPNGISTSLPEDVQNAYVQTILGLEDAKILQPGYAIEYDYVDPRALDARLSVKGV 360 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQINGTTGYEEAAAQGLVAG+N+A + D + FSRT+SYIGVMIDDLT++GV Sbjct: 361 EGLFFAGQINGTTGYEEAAAQGLVAGLNAALEIQGRDPVIFSRTNSYIGVMIDDLTTRGV 420 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAE+R+SLR DNAD RLTP+G++LGC+G +R+ F + + + S LK+ Sbjct: 421 TEPYRMFTSRAEFRLSLRADNADQRLTPLGIELGCVGYKRRLAFEEKKLQIASVVSALKA 480 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 +LT K +++ IS QDG R + L++PD +++ + P+ + ++ E+++ ++ Sbjct: 481 KLLTPKEINAGGISVNQDGNRRDGIQVLAFPDVKFEDVLDLFPELTETPRVIREQVERDA 540 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y+ Y RQ + +K +E + IPK FDY+++ +LSNELK+KL ++P NL QA +++G Sbjct: 541 LYSNYIARQQKDVDALKRDEAQNIPKGFDYTTIDSLSNELKQKLGQVQPMNLAQAGRVDG 600 Query: 601 MTP 603 MTP Sbjct: 601 MTP 603 >gi|83944970|ref|ZP_00957336.1| glucose-inhibited division protein A [Oceanicaulis alexandrii HTCC2633] gi|83851752|gb|EAP89607.1| glucose-inhibited division protein A [Oceanicaulis alexandrii HTCC2633] Length = 630 Score = 703 bits (1815), Expect = 0.0, Method: Compositional matrix adjust. Identities = 337/612 (55%), Positives = 425/612 (69%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R +DVIVIGGGHAGCEAA+ +A+LGA T L+THK STIG MSCNPAIGGLGKGHLVRE+D Sbjct: 11 RPWDVIVIGGGHAGCEAASASARLGARTLLLTHKASTIGEMSCNPAIGGLGKGHLVREVD 70 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDG+MGRVADA+GIQFR+LN KGPAVRGPRTQ+DR+LYR AMQ+ + Q NL +++ Sbjct: 71 ALDGVMGRVADASGIQFRLLNRSKGPAVRGPRTQSDRKLYREAMQQALSEQANLSIVEAA 130 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 E ++ R VVLTTGTFL+GVIH G +IPAGR G++P+N L Sbjct: 131 AEDLIIENGRCCGVIDGAGRAYRAGAVVLTTGTFLKGVIHRGHERIPAGRHGEAPANGLS 190 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + GRLKTGTPARLDG TI WD+ E Q ADE +PFSF+ D+I RQI CGIT Sbjct: 191 ETLYGLGLRMGRLKTGTPARLDGSTIHWDQLEMQAADETPVPFSFLNDQIHVRQIACGIT 250 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 RT TH+II +N+ SA+Y G I GPRYCPSIEDK+VRF +R+ HQ+FLEPEGL+ D Sbjct: 251 RTTEATHKIIADNLDQSAVYGGAISGRGPRYCPSIEDKVVRFADRSQHQVFLEPEGLDDD 310 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNGIST+LP+ +Q F++TIPGLE V + R GYAIEYDY++P+EL LE K ++GL Sbjct: 311 TVYPNGISTSLPDAVQDAFLKTIPGLEDVKVRRYGYAIEYDYVDPRELSAALEVKAMAGL 370 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 FLAGQINGTTGYEEAAAQGL+AG N+A K++ D R+++YIGVMIDDL ++GV EP Sbjct: 371 FLAGQINGTTGYEEAAAQGLMAGFNAALKASGSDPFILDRSEAYIGVMIDDLITRGVTEP 430 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR++LR DNAD RLT + LG R+ + + + R +L L Sbjct: 431 YRMFTSRAEYRLTLRADNADQRLTDKAIALGAASVSRETSWRQRQADLARAREQATTLTL 490 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 T I +DGK R+ E LSYPD ++ I P+ + V E+++I++ Y Sbjct: 491 TPAEAKRHGIKVNEDGKRRSVMELLSYPDIGWSDMVRIWPELGEIKPRVAEQVEIDAVYH 550 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y RQ + + +E IP DFDY+ + LSNE++EKL P L QA++IEG+TP Sbjct: 551 GYLDRQQSDILAFRRDEGVRIPADFDYAQVGGLSNEVREKLIKASPDTLGQAARIEGVTP 610 Query: 604 AALNLLLIYIKK 615 AL LL Y+K+ Sbjct: 611 GALTALLAYLKR 622 >gi|295691565|ref|YP_003595258.1| glucose inhibited division protein A [Caulobacter segnis ATCC 21756] gi|295433468|gb|ADG12640.1| glucose inhibited division protein A [Caulobacter segnis ATCC 21756] Length = 618 Score = 702 bits (1813), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/615 (54%), Positives = 439/615 (71%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +++S+DVIVIGGGHAGCEAAA +A+ GA T L+THK TIG MSCNPAIGGLGKGHLVRE Sbjct: 1 MSKSWDVIVIGGGHAGCEAAAASARTGARTLLLTHKLETIGEMSCNPAIGGLGKGHLVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDALDG+MGR+AD AGIQFR+LN KGPAVRGPR+Q DR+LYR AMQ E+ S NLD+I Sbjct: 61 IDALDGVMGRMADKAGIQFRMLNRSKGPAVRGPRSQIDRKLYREAMQAELFSTGNLDIIA 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 E ++ + + R V+LTTGTFL+GVIH G+ +IPAGR+GD P+ Sbjct: 121 AAAEDLIVEDGKVAGAMDGEGRTYRAPRVILTTGTFLKGVIHRGEERIPAGRVGDQPAIG 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L + F GRLKTGTPARLDG+TI WD+ + Q AD+ +PFS++ DKI QI CG Sbjct: 181 LSDRLYGLGFQMGRLKTGTPARLDGRTIAWDRLDSQAADDEPVPFSYLNDKIDVPQIACG 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T T ETHRII E I S +YSG GPRYCPSIEDK+VRF ++ HQIFLEPEGL+ Sbjct: 241 VTFTTEETHRIIAERIGESLVYSGRATGVGPRYCPSIEDKVVRFADKTSHQIFLEPEGLD 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 VYPNGIST++ EE Q F+RTIPGLE V ++R GYAIEYDY++P+EL+ TLETK++ Sbjct: 301 DPTVYPNGISTSVSEETQLLFLRTIPGLETVEVLRYGYAIEYDYVDPRELYATLETKRLP 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GL+LAGQINGTTGYEEA AQGLVAG+N+A + + F+R ++YIGVMIDDL ++GV Sbjct: 361 GLYLAGQINGTTGYEEAGAQGLVAGLNAALAEQGREPVVFARDEAYIGVMIDDLVTRGVT 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAE+R++LR DNAD RLT G+ LG +GERR +A+ R+ +S+ Sbjct: 421 EPYRMFTSRAEFRLTLRADNADQRLTDRGVALGVVGERRATAWAEKKARLEAARAFARSV 480 Query: 482 VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 LT DG R + L+YPD ++ +L + P+ +++ V E+++IE++ Sbjct: 481 SLTPNEAVKAGFKVNSDGVRRDVFAMLAYPDVTLDDLGRVWPEVFTWNTDVREQIEIEAA 540 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ +A+ ++ +E +P D DY+ + +LSNE++EKL+ ++P L QA++IEG+ Sbjct: 541 YAGYLDRQRADAESLRKDEDLRLPADLDYADIGSLSNEVREKLARVRPLTLGQAARIEGV 600 Query: 602 TPAALNLLLIYIKKN 616 TP AL LL ++++ Sbjct: 601 TPGALTALLAHVRRT 615 >gi|154251727|ref|YP_001412551.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Parvibaculum lavamentivorans DS-1] gi|171769576|sp|A7HSL1|MNMG_PARL1 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|154155677|gb|ABS62894.1| glucose inhibited division protein A [Parvibaculum lavamentivorans DS-1] Length = 618 Score = 701 bits (1808), Expect = 0.0, Method: Compositional matrix adjust. Identities = 341/615 (55%), Positives = 437/615 (71%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + R +DVIVIGGGHAGCEAA+ AA+ GA TALITHK +TIG MSCNPAIGGLGKGHLVRE Sbjct: 1 MTRDFDVIVIGGGHAGCEAASAAARAGARTALITHKLATIGEMSCNPAIGGLGKGHLVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DALDGLMGRVAD AGIQFR+LN +KGPAVRGPR QADR+LYR AMQ IL+ NL+VI+ Sbjct: 61 VDALDGLMGRVADQAGIQFRLLNRRKGPAVRGPRAQADRKLYRAAMQEAILNHRNLEVIE 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G V+ E ++ ++ +D R VVLTTGTFLRGVIH+G +IPAGR+G++P+ Sbjct: 121 GGVSDLIVEDGHVAGVIAEDGRQFRARRVVLTTGTFLRGVIHLGTQRIPAGRVGEAPALG 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L + F GRLKTGTP RL G +I W E Q D+ +PFSF+T +IT Q+ C Sbjct: 181 LSDRLYGLGFQLGRLKTGTPPRLAGDSIDWSSLEVQPGDDPPVPFSFLTTEITTPQVPCH 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 ITRT E HRII +N+ S +YSG I+ GPRYCPSIEDK+VRF ER+ HQIFLEPEGL+ Sbjct: 241 ITRTTAEGHRIIEDNLHVSPVYSGQIEGVGPRYCPSIEDKVVRFRERDSHQIFLEPEGLD 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 D +YPNGISTALPEE+Q F++TIPGLE V + R GYAIEYDYI+P+EL PTLETK++ Sbjct: 301 DDTIYPNGISTALPEEVQLAFLKTIPGLENVVMRRAGYAIEYDYIDPRELRPTLETKRLG 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GL+LAGQINGTTGYEEAAAQGL+AG+N+A + R +Y+GVM+DDL ++GV Sbjct: 361 GLYLAGQINGTTGYEEAAAQGLIAGLNAALAERGAEPFILDRAQAYMGVMVDDLITRGVS 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR++LR DNAD RLT G+ G +GERR + + R L L Sbjct: 421 EPYRMFTSRAEYRLTLRADNADQRLTAAGIGAGVVGERRVMAYEAKARALEAARVLCDGL 480 Query: 482 VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 L+ L+ + QDG RTA + L+YPD L + P+ + E++ IE+ Sbjct: 481 RLSPTELARRGLKVNQDGVARTAMDLLAYPDIDAGVLAGVWPELAALEPHIAEQMGIEAQ 540 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ + K + +E +P + DY+S+ LS+E+++KL+ +P L QA++++G+ Sbjct: 541 YAGYLDRQDADIKAFRRDEGLRLPAEIDYASVLGLSHEVRQKLAKARPATLGQAARVDGV 600 Query: 602 TPAALNLLLIYIKKN 616 TPAAL L+I++K+ Sbjct: 601 TPAALTTLMIHVKQK 615 >gi|146337362|ref|YP_001202410.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Bradyrhizobium sp. ORS278] gi|205831491|sp|A4YJT4|MNMG_BRASO RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|146190168|emb|CAL74160.1| Glucose-inhibited division protein A [Bradyrhizobium sp. ORS278] Length = 624 Score = 698 bits (1802), Expect = 0.0, Method: Compositional matrix adjust. Identities = 341/612 (55%), Positives = 438/612 (71%), Gaps = 1/612 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIGGGHAGCEAAA +A++GA TAL+TH+ +TIG+MSCNPAIGGLGKGHLVRE+DA Sbjct: 6 SYDVIVIGGGHAGCEAAAASARMGARTALVTHRFATIGAMSCNPAIGGLGKGHLVREVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRVADA GIQFRVLN +KGPAVRGPR QADR+LY AMQ I NL V++GE Sbjct: 66 LDGLMGRVADAGGIQFRVLNRRKGPAVRGPRAQADRKLYAAAMQSAIRETTNLAVVEGEA 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 ++ I + D + C VV+TTGTFLRG+IH+G+ PAGR+G++P+ L Sbjct: 126 DDLIVVDGRVTGIKLADGRSLACGAVVITTGTFLRGLIHLGEKTWPAGRVGEAPALGLSR 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S F+ GRLKTGTP RLDG TI W E Q D+ PFS +T+ IT QI+CGITR Sbjct: 186 SLEAIGFNLGRLKTGTPPRLDGTTIDWGAVEMQTGDDPAEPFSVLTETITTPQIQCGITR 245 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T + TH +I N+ S +YSG IKS GPRYCPS+EDKIVRFG+R+GHQIFLEPEGL+ Sbjct: 246 TTIATHEVIRANVHRSPMYSGQIKSTGPRYCPSVEDKIVRFGDRDGHQIFLEPEGLDDST 305 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LPEE+Q + TIPGLE+V +IRPGYAIEYD+++P+EL PTL+TK++ GLF Sbjct: 306 VYPNGISTSLPEEVQLALLPTIPGLERVRMIRPGYAIEYDHVDPRELEPTLQTKRMKGLF 365 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEAAAQGLVAGIN+A + I F R D Y+GVMIDDL ++G+ EPY Sbjct: 366 LAGQINGTTGYEEAAAQGLVAGINAALAAGGGAPIVFDRADGYLGVMIDDLVTRGITEPY 425 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR++LR DNAD RLT G+ LGC+G R + + + R++ SL +T Sbjct: 426 RMFTSRAEYRLTLRADNADQRLTDKGIALGCVGGERVRFHRRKLAALQAARAVATSLTIT 485 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + ++ +DG+ R+A+E ++YP+ + SI P+ +V L+I++ Y Sbjct: 486 PNEAAKHGLTLNRDGQRRSAFELMAYPEIDFAKVRSIWPELEAIDPVVATHLEIDAKYDV 545 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + + +E L+ D DY+ +P LSNE + KL+ KP+ + QA +I+GMTPA Sbjct: 546 YVRRQSEDVDAFRRDEG-LVLGDIDYAIVPGLSNEARAKLTAAKPWTIGQAGRIDGMTPA 604 Query: 605 ALNLLLIYIKKN 616 AL +L Y+++ Sbjct: 605 ALGILAAYLRRE 616 >gi|254292377|ref|YP_003058400.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Hirschia baltica ATCC 49814] gi|254040908|gb|ACT57703.1| glucose inhibited division protein A [Hirschia baltica ATCC 49814] Length = 620 Score = 696 bits (1797), Expect = 0.0, Method: Compositional matrix adjust. Identities = 337/615 (54%), Positives = 441/615 (71%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +N +DVI++GGGHAG EAA+ AA+ GA+TALITHK STIG MSCNPAIGGLGKGHLVRE Sbjct: 1 MNLDFDVIIVGGGHAGVEAASAAARAGANTALITHKASTIGEMSCNPAIGGLGKGHLVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDALDG+MGR AD +GIQFR+LN KGPAV+GPRTQADR+LYR A+Q + +Q+NL VI+ Sbjct: 61 IDALDGIMGRAADVSGIQFRLLNRSKGPAVQGPRTQADRKLYRNAVQAAVKAQKNLTVIE 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 + E +++S +V + ++ + VVLTTGTFL G+IH G+ +IPAGR+GD P+ Sbjct: 121 DGIDDLTFENDVLSGVVGESGTIYKSKAVVLTTGTFLDGIIHRGEERIPAGRIGDQPAKE 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L D D GRLKTGTPARLD +I W + E Q AD+ +PFSF+TDKIT QIECG Sbjct: 181 LSKRLYSLDLDMGRLKTGTPARLDKNSIDWSQLEMQPADDDPVPFSFLTDKITVPQIECG 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN ETH++I +NI SA+YSG I GPRYCPSIEDK+ RF +RN HQIFLEPEGL+ Sbjct: 241 MTYTNEETHKVINDNISKSAVYSGAIAGKGPRYCPSIEDKVTRFADRNQHQIFLEPEGLD 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 D+VYPNGIST+LP ++Q +F+RT+ GLE V +++ GYAIEYDY++P+EL L+ KK+ Sbjct: 301 DDLVYPNGISTSLPADVQDKFLRTMKGLENVKVVQYGYAIEYDYVDPRELKADLQLKKVP 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GL+LAGQINGTTGYEEA AQGL+AG+N+AR + L+ + R+ +YIGVMIDDL ++GV Sbjct: 361 GLYLAGQINGTTGYEEAGAQGLMAGVNAARSTQGLEPVVLDRSQAYIGVMIDDLVTRGVS 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+SLR DNAD RLTP + I E R+ F + R LL+ L Sbjct: 421 EPYRMFTSRAEYRLSLRADNADQRLTPFADEWNIISEDRRSAFNNKLNALQHGRELLQRL 480 Query: 482 VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +T + + QDG+ R+AYE L++P + L P+ S V E+L IE+ Sbjct: 481 AMTPNEATDIGVKITQDGRRRSAYEMLAFPHVEYETLAKKWPELLDLSKQVQEQLSIEAI 540 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ + + + +E+ + + DY + LS+E++ KL ++KP L QAS+IEG+ Sbjct: 541 YATYLDRQKADIESFQKDERLKLSETLDYKLVGGLSHEVRSKLELIKPITLGQASRIEGV 600 Query: 602 TPAALNLLLIYIKKN 616 TP A+ LL Y+KK+ Sbjct: 601 TPGAITALLAYVKKS 615 >gi|294675620|ref|YP_003576235.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rhodobacter capsulatus SB 1003] gi|294474440|gb|ADE83828.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rhodobacter capsulatus SB 1003] Length = 620 Score = 696 bits (1797), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/613 (54%), Positives = 435/613 (70%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DVIV+GGGHAG EAA +A+LGA T L+T + IG MSCNPAIGGLGKGHLVRE+D Sbjct: 2 KHFDVIVVGGGHAGTEAAHASARLGARTVLVTMRREAIGVMSCNPAIGGLGKGHLVREVD 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 A+DG+MG+ AD AGIQFR+LN +KGPAV+GPRTQADR+LYRLA+ +Q LDV++GE Sbjct: 62 AMDGVMGKAADRAGIQFRLLNRRKGPAVQGPRTQADRKLYRLAIAELCATQPLLDVVEGE 121 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V IS + + D S I +VVLTTGTFL GVIHIG + P GR+GD PS L Sbjct: 122 VTDLLLAGTTISGVRLMDGSEIFAPSVVLTTGTFLNGVIHIGDQQSPGGRVGDRPSVPLS 181 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + GRLKTGTP RLDG++I WD EKQ DE + SF++ RQI CGIT Sbjct: 182 QRLREIAPAVGRLKTGTPPRLDGRSIDWDSLEKQPGDEDPVMLSFLSTGPFVRQIACGIT 241 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH +I EN++ SA+Y G I+ GPRYCPSIEDK+VRF ++ HQ+FLEPEGL+ D Sbjct: 242 HTNESTHEVIRENLQRSAMYGGHIEGVGPRYCPSIEDKVVRFADKTSHQVFLEPEGLDDD 301 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNGIST+LP ++Q +++++I GLE+ I++PGYAIEYDY++P+ L TLE + GL Sbjct: 302 TVYPNGISTSLPADVQERYVQSIRGLERARILQPGYAIEYDYVDPRALKLTLELRDQEGL 361 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 FLAGQINGTTGYEEAAAQG+VAG+N+A K+ + D + FSRTDSYIGVMIDDL S+GV EP Sbjct: 362 FLAGQINGTTGYEEAAAQGMVAGLNAASKALRRDPVTFSRTDSYIGVMIDDLVSRGVSEP 421 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R+ LR DNAD RLTP G+++GC+GE RQ+RF + +++ + +L +VL Sbjct: 422 YRMFTSRAEFRLFLRADNADQRLTPRGVEIGCVGEERQRRFDEKMEKMAAGKGILDGIVL 481 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 T S ++ QDG R+A++ L++PD + L PD + + +L IE+ YA Sbjct: 482 TPGQAISLGLALNQDGVKRSAFQLLAFPDVTFGQLRESFPDLNAIAPDIATQLSIEALYA 541 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y RQ + ++ +E IP DFDY +L LSNELK K S P L QAS+++G TP Sbjct: 542 NYILRQQRDVDAMRRDENWEIPADFDYGALSGLSNELKMKFSAAAPRTLHQASQVDGATP 601 Query: 604 AALNLLLIYIKKN 616 AAL+L+L +++ Sbjct: 602 AALSLILARLRQT 614 >gi|254472179|ref|ZP_05085579.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudovibrio sp. JE062] gi|211958462|gb|EEA93662.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudovibrio sp. JE062] Length = 627 Score = 696 bits (1796), Expect = 0.0, Method: Compositional matrix adjust. Identities = 350/611 (57%), Positives = 458/611 (74%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DV+VIGGGHAGCEAAA AA++GA TALITH+ TIG MSCNPAIGGLGKGHLVREIDAL Sbjct: 9 FDVVVIGGGHAGCEAAAAAARMGAHTALITHRFDTIGVMSCNPAIGGLGKGHLVREIDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGLMGRVADA+GIQFR+LN +KGPAV+GPR+QADR+LYR AMQ EI + NL+V++GE Sbjct: 69 DGLMGRVADASGIQFRMLNRRKGPAVQGPRSQADRKLYREAMQAEIKAIANLEVVEGEAD 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E +I+ IV+ D + VV+TTGTFLRG+IHIG +IPAGR G++P+ L S Sbjct: 129 KLIREGDILKGIVLGDGRQVSAKAVVITTGTFLRGLIHIGDKQIPAGRDGEAPALGLSVS 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + GRLKTGTPARLDG+TI WD ++Q DE IPFS +TD+I RQ+ C ITRT Sbjct: 189 LEEIGLRLGRLKTGTPARLDGRTINWDILQQQPGDEEPIPFSTLTDEIQIRQVPCYITRT 248 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 ETH+II +NIK SA+YSG+IK GPRYCPSIEDKIVRFG+R+GHQ+FLEPEGL V Sbjct: 249 TPETHKIIRDNIKRSAMYSGEIKGRGPRYCPSIEDKIVRFGDRDGHQVFLEPEGLGDPTV 308 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YPNGIST+LPE++Q +F+RTIPGLEKV +P YAIEYD+I+P EL TLE KK GL+L Sbjct: 309 YPNGISTSLPEDVQIEFLRTIPGLEKVEYFKPAYAIEYDHIDPTELTNTLEVKKQKGLYL 368 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEA AQGL+AG+N+AR + + R D YIGVM+DDL ++GV EPYR Sbjct: 369 AGQINGTTGYEEAGAQGLLAGLNAARTAQDGAPVTVGRADGYIGVMVDDLITRGVSEPYR 428 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAEYR++LR DNAD RLTP+G++ GCIG+ R+ F +++ + L++S+ +T Sbjct: 429 MFTSRAEYRLTLRADNADQRLTPLGIEWGCIGDTRRVAFETKMEKLRKTKDLMQSVKITP 488 Query: 486 KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAY 545 + QDG R+A++ L+YP+ ++++L I + + V E++ I++ YA Y Sbjct: 489 NEGRKKGLPINQDGVKRSAFDLLAYPNITLKDLMGIFDELKDLDLKVAEQVSIDAMYAVY 548 Query: 546 TGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAA 605 RQ + + +K +E +IP+ DY++L LSNE+++KL ++P + QAS+++G+TPAA Sbjct: 549 LERQAADIEALKRDEDLVIPEWIDYAALTGLSNEVRQKLEAVRPSTIGQASRMDGITPAA 608 Query: 606 LNLLLIYIKKN 616 L LLL YI+++ Sbjct: 609 LTLLLAYIRRS 619 >gi|114571502|ref|YP_758182.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Maricaulis maris MCS10] gi|122314957|sp|Q0AKE9|MNMG_MARMM RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|114341964|gb|ABI67244.1| glucose inhibited division protein A [Maricaulis maris MCS10] Length = 619 Score = 696 bits (1795), Expect = 0.0, Method: Compositional matrix adjust. Identities = 342/614 (55%), Positives = 430/614 (70%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 +++DVIVIGGGHAGC+AAA +A+LGA T L+THK TIG MSCNPAIGGLGKGHLVREID Sbjct: 2 QTWDVIVIGGGHAGCDAAAASARLGARTLLLTHKLETIGEMSCNPAIGGLGKGHLVREID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDG+MGRVADA+GIQFR+LN KGPAVRGPRTQ+DR LYR AMQ E+ Q NL++ Sbjct: 62 ALDGVMGRVADASGIQFRLLNRSKGPAVRGPRTQSDRALYRTAMQSELSGQANLEIRAAA 121 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 + E + D VVLTTGTFLRG+IH G +IPAGR G++PS L Sbjct: 122 IEDLMFEGERCVGAMDADGHAYHAVAVVLTTGTFLRGLIHKGAERIPAGRAGEAPSIGLS 181 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 ++ + GRLKTGTPARL TI WD E+Q AD+ +PFSFMTD+I QI C +T Sbjct: 182 DTLYGLNLQMGRLKTGTPARLLKSTIDWDSLEQQAADDVPVPFSFMTDRIEVHQISCAVT 241 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 RT TH+II +N+ SA+YSG I GPRYCPSIEDK+VRF +R+ HQIFLEPEGL+ D Sbjct: 242 RTTEATHKIIADNLGQSAVYSGAIAGRGPRYCPSIEDKVVRFADRSQHQIFLEPEGLDDD 301 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNGIST+LP+++Q F+ TIPGLE+V + R GYAIEYDY++P+EL TL+ +K +GL Sbjct: 302 TVYPNGISTSLPDDVQQAFLETIPGLEQVVVKRYGYAIEYDYVDPRELDATLQLRKRAGL 361 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 +LAGQINGTTGYEEAAAQGLVAG N+A + + SR+D+YIGVMIDDL ++GV EP Sbjct: 362 WLAGQINGTTGYEEAAAQGLVAGANAALFATGREPFVLSRSDAYIGVMIDDLITRGVSEP 421 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLTP M+LG R F + ++E + RSL +L L Sbjct: 422 YRMFTSRAEYRLSLRADNADQRLTPKAMELGLASRGRGAVFCRKMEELSEARSLASNLSL 481 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 T +S DGK R E L+YPD L I P+ + S V E+++I++ YA Sbjct: 482 TPNEARDKGLSVNADGKRRAVTELLAYPDVGWDRLVGIWPELGRVSPSVSEQIEIDALYA 541 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y RQ + + +E +P+D DYS + LSNE +EKL +P L QA++IEG+TP Sbjct: 542 GYIDRQQADILAFRRDEAVRLPRDLDYSGIGGLSNEAREKLERARPETLGQAARIEGVTP 601 Query: 604 AALNLLLIYIKKNT 617 AL +L ++K+ T Sbjct: 602 GALTAVLAHVKRRT 615 >gi|182678269|ref|YP_001832415.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Beijerinckia indica subsp. indica ATCC 9039] gi|205831489|sp|B2IJQ4|MNMG_BEII9 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|182634152|gb|ACB94926.1| glucose inhibited division protein A [Beijerinckia indica subsp. indica ATCC 9039] Length = 618 Score = 695 bits (1794), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/611 (55%), Positives = 445/611 (72%), Gaps = 1/611 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDV+V+GGGHAGCEAAA +A+LGA TAL+T +TIGSMSCNPAIGGLGKGHLVREIDA Sbjct: 4 TYDVVVVGGGHAGCEAAAASARLGARTALVTQAFATIGSMSCNPAIGGLGKGHLVREIDA 63 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRVADAAGIQFRVLN KGPAVRGPR QADR+LYR AMQ EI + LDVI+GE Sbjct: 64 LDGLMGRVADAAGIQFRVLNRAKGPAVRGPRAQADRKLYRAAMQAEIQAVNGLDVIEGEA 123 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 G + I+ +++ ++ C+ VVLTTGTFLRG+IHIG+ ++ AGR+G++P+ ++ Sbjct: 124 EGLCFDGEKIAGVLVGVETLA-CAAVVLTTGTFLRGLIHIGEKQVRAGRIGEAPAEAMGL 182 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + GRLKTGTPARLDG++I W + E+Q D PFSF+T+ IT Q++C IT Sbjct: 183 ALEALGLSMGRLKTGTPARLDGRSIDWSRLERQSGDVEPEPFSFLTEAITRPQVDCFITT 242 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETH +I EN+ +S +YSG I GPRYCPSIEDK+VRF +R HQIFLEPEGL+ Sbjct: 243 TTPETHAVIRENLHYSPVYSGAINGRGPRYCPSIEDKVVRFADREAHQIFLEPEGLDVPT 302 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGISTALPE +Q +F+RTIPGLE V I++ GYAIEYDY++P+EL LE K++ GLF Sbjct: 303 IYPNGISTALPESVQERFLRTIPGLEHVAILQHGYAIEYDYVDPRELTAGLEVKRVPGLF 362 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEA AQGL+AG+N+A ++ L I F R+++Y+GVMIDDL ++GV EPY Sbjct: 363 LAGQINGTTGYEEAGAQGLIAGLNAAARAGGLAPITFDRSEAYLGVMIDDLINRGVSEPY 422 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR++LR DNAD RLT GM LGCIG++R + F + N R LL L L+ Sbjct: 423 RMFTSRAEYRLTLRADNADQRLTGKGMILGCIGQQRAEIFKAKSEALNSARDLLAGLSLS 482 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + + +DG RTA++ L+ PD +++ L SI P+ + + +++I++ YA Sbjct: 483 PTEATRHGLKVNRDGVRRTAFDLLALPDVTLETLRSIWPELKTIPETIAAQIEIDAHYAV 542 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + + +E +P D DY+S+ LSNE++ +L+ ++P L QA +IEGMTP Sbjct: 543 YLDRQEADIAAFRRDEGLALPTDLDYASMQGLSNEIRGRLAAIRPATLGQAGRIEGMTPT 602 Query: 605 ALNLLLIYIKK 615 AL LL +++ Sbjct: 603 ALTLLAARVRR 613 >gi|319899517|ref|YP_004159614.1| glucose inhibited division protein A [Bartonella clarridgeiae 73] gi|319403485|emb|CBI77065.1| glucose inhibited division protein A [Bartonella clarridgeiae 73] Length = 622 Score = 694 bits (1792), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/616 (55%), Positives = 437/616 (70%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 +SYDVIVIGGGHAGCEAA+ +A++GA TAL+T++ S +G+MSCNPAIGGLGKGHLVREID Sbjct: 2 QSYDVIVIGGGHAGCEAASASARIGAQTALVTYQISKLGTMSCNPAIGGLGKGHLVREID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDGLMG+ ADAAGIQFR+LN +KGPAVRGPRTQ DR+LY+ +Q+ + Q+NL +I+ E Sbjct: 62 ALDGLMGQAADAAGIQFRLLNRRKGPAVRGPRTQVDRQLYKNKIQQLLQKQDNLILIEDE 121 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + +S ++ I + VVLTTGTFLRG+IHIG AGRMG+ S L Sbjct: 122 VIDLIIKDGRVSGAFLKKQGNIYSNAVVLTTGTFLRGLIHIGNKTWSAGRMGEQSSIQLA 181 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + + GRLKTGTPAR KTI W+K KQ ADE +PFS +T+KI QIEC IT Sbjct: 182 ERLKNYGINLGRLKTGTPARFSKKTISWNKLLKQQADEDPVPFSLLTEKIEQPQIECAIT 241 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 RTN +TH+II ENI SA+YSG I+ GPRYCPSIEDKI++FG+R+GHQIFLEPEGL+ D Sbjct: 242 RTNKKTHQIIRENIHKSALYSGVIEGLGPRYCPSIEDKIIKFGDRDGHQIFLEPEGLDND 301 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LPE+IQ F+RTI GLE V I++PGYAIEYD+++P++L LE + + GL Sbjct: 302 TIYPNGISTSLPEDIQISFLRTIEGLENVEILQPGYAIEYDFVDPRQLSRNLELRFLPGL 361 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 FLAGQINGTTGYEEAAAQGL+AG+N+AR+ L+ I SR+ +YIGVMIDDL S+GV EP Sbjct: 362 FLAGQINGTTGYEEAAAQGLLAGLNAARQVGGLEEIILSRSTAYIGVMIDDLISRGVREP 421 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R+SLR DNAD RLTP+ + G I + R + + Q + R + + L L Sbjct: 422 YRMFTSRAEFRLSLRADNADARLTPLAKQWGIISQTRWVCYQQKQQRLDQARLMCQKLFL 481 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 T S + DG R+AY+ L+ P S+ L P S +E L+IE+ YA Sbjct: 482 TPNEASVHGLQINNDGIRRSAYDLLARPHMSVARLAHFWPQLHSIDSKTVEALEIEAQYA 541 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y RQ + ++ +E+ IP ++ + LSNELK K + P ++ A KI+GMTP Sbjct: 542 VYLERQAQDIMALQRDERLEIPSSLNFQEISGLSNELKAKFQQISPRSIADAKKIDGMTP 601 Query: 604 AALNLLLIYIKKNTVK 619 AAL+L+L YI++ K Sbjct: 602 AALSLILTYIQRQRHK 617 >gi|163757464|ref|ZP_02164553.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Hoeflea phototrophica DFL-43] gi|162284966|gb|EDQ35248.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Hoeflea phototrophica DFL-43] Length = 622 Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust. Identities = 351/598 (58%), Positives = 440/598 (73%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAG EAAA +A++G T L+THK +IG MSCNPAIGGLGKGHLVRE+DA+ Sbjct: 3 YDVIVIGGGHAGSEAAAASARMGVRTVLVTHKRKSIGVMSCNPAIGGLGKGHLVREVDAM 62 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLMG AD +GIQFR+LN +KGPAV GPRTQADR+LY+ ++Q ++ + +NLDVI+ E Sbjct: 63 GGLMGLAADQSGIQFRMLNRRKGPAVWGPRTQADRKLYKASIQAQLSAIDNLDVIEAEAD 122 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 G + + +V++D I C VVLTTGTFLRG+IHIG +IPAGRM ++P+ N Sbjct: 123 GLVQDGQGPTHVVLKDGRQIGCKAVVLTTGTFLRGLIHIGDQRIPAGRMNEAPALGFSNV 182 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 F+ GRLKTGTPARLDGKTI WD+ Q AD IPFSFMTD I QI CGITRT Sbjct: 183 LENAGFELGRLKTGTPARLDGKTIDWDQVGWQEADAEPIPFSFMTDHIEVPQIRCGITRT 242 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 TH+II +NI SA+YSG I+ GPRYCPSIEDKIVRFGER+GHQIFLEPEGL+ D V Sbjct: 243 TAATHKIIQDNIHRSAMYSGQIEGVGPRYCPSIEDKIVRFGERDGHQIFLEPEGLDDDTV 302 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YPNG+ST+LPEE+Q F+R+IPGL+ V II+PGYAIEYD+++P+EL TLET++I GLFL Sbjct: 303 YPNGVSTSLPEEVQEAFLRSIPGLQDVRIIQPGYAIEYDHVDPRELSHTLETRRIPGLFL 362 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAAAQGLVAG+N+A + FSRT+SYIGVMIDDLT+KGV EPYR Sbjct: 363 AGQINGTTGYEEAAAQGLVAGLNAALLVQGRESCLFSRTNSYIGVMIDDLTTKGVSEPYR 422 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAEYR+SLR DNA+ RLTP+ ++LGC+ R ++ A Y + + L + LT Sbjct: 423 MFTSRAEYRLSLRADNAEQRLTPLAIELGCLSSERVEKSATYFDSLSKCLADLNARNLTP 482 Query: 486 KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAY 545 +S IS QDG R+A++ LSYP+ S++ + S+ PD + V+ ++++YA Y Sbjct: 483 NQAASRGISLNQDGLRRSAFQLLSYPEVSLEQILSVWPDLEVYGDKVLAAAAVDAAYAVY 542 Query: 546 TGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 RQ + + + EE R IP DFDY L LSNELK+KL +P ++ A +IEGMTP Sbjct: 543 LDRQQQDIAQRQKEEARAIPADFDYGVLNGLSNELKQKLERFRPPSIGHAERIEGMTP 600 >gi|167648979|ref|YP_001686642.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Caulobacter sp. K31] gi|189039333|sp|B0T6E1|MNMG_CAUSK RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|167351409|gb|ABZ74144.1| glucose inhibited division protein A [Caulobacter sp. K31] Length = 618 Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust. Identities = 333/614 (54%), Positives = 439/614 (71%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 ++ ++DVIVIGGGHAGCEAA+ +A+ GA T L+THK T+G MSCNPAIGGLGKGHLVRE Sbjct: 1 MSNTWDVIVIGGGHAGCEAASASARAGARTLLLTHKRETVGEMSCNPAIGGLGKGHLVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDALDGLMGR+ D AGIQ+R+LN KGPAVRGPR+Q DR+LYR AMQ E+ S NLDV+ Sbjct: 61 IDALDGLMGRIGDKAGIQYRLLNRSKGPAVRGPRSQIDRKLYREAMQAELFSHVNLDVVA 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E +++ + + ++ R VVLTTGTFL+GVIH G+++I AGR+GD+PS Sbjct: 121 IAVEDLIVEDGVVAGAIDGEGAIYRAPRVVLTTGTFLKGVIHQGEIRISAGRVGDAPSIG 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L + FD GRLKTGTPARLDGKTI WD+ E Q ADE+ PFSF+T +I QI+CG Sbjct: 181 LADRLYALGFDMGRLKTGTPARLDGKTIAWDRLEMQAADEQPEPFSFLTTRIDVPQIQCG 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT T ETH+II E + SA+Y G GPRYCPSIEDK+VRF ++ HQ+FLEPEGL+ Sbjct: 241 ITYTTAETHKIIAERLGESAVYGGRATGIGPRYCPSIEDKVVRFADKTSHQVFLEPEGLD 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 D VYPNG+ST++ E Q F+RT+PGLE V +IR GYAIEYDY++P+EL+PTLETK++ Sbjct: 301 DDTVYPNGVSTSVSAETQLLFLRTMPGLENVEVIRYGYAIEYDYVDPRELYPTLETKRLP 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GL+LAGQINGTTGYEEA AQGL+AG+N+A + F+R ++YIGVMIDDL ++GV Sbjct: 361 GLYLAGQINGTTGYEEAGAQGLMAGLNAALAVQGREPAVFARDEAYIGVMIDDLVTRGVT 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAE+R+ LR DNAD RLT G+ LGC+G R + +A E +R+ +S+ Sbjct: 421 EPYRMFTSRAEFRLILRADNADQRLTDRGLALGCVGSVRAEAWAAKKAELEAVRAFARSV 480 Query: 482 VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 LT + T DG+ R L+ P+ ++ L ++ P +S + E++ IE++ Sbjct: 481 TLTPAEANRTGFKVNHDGQRRDVLAMLALPEVTLDRLATVWPQISTWSPMAREQIAIEAA 540 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ + + + EE +P D DY + +LSNE++EKL+ +KP L QA++IEG+ Sbjct: 541 YAGYLDRQRDDVEAFRREEDLRLPADLDYGLVGSLSNEVREKLARVKPLTLGQAARIEGV 600 Query: 602 TPAALNLLLIYIKK 615 TP AL LL ++++ Sbjct: 601 TPGALTALLAHVRR 614 >gi|16127985|ref|NP_422549.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Caulobacter crescentus CB15] gi|221236807|ref|YP_002519244.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Caulobacter crescentus NA1000] gi|13425529|gb|AAK25717.1| glucose inhibited division protein A [Caulobacter crescentus CB15] gi|220965980|gb|ACL97336.1| glucose inhibited division protein A [Caulobacter crescentus NA1000] Length = 640 Score = 692 bits (1787), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/616 (54%), Positives = 436/616 (70%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 ++++S+DVIVIGGGHAGCEAAA +A+ GA T L+THK TIG MSCNPAIGGLGKGHLVR Sbjct: 22 VLSKSWDVIVIGGGHAGCEAAAASARAGARTLLLTHKLETIGEMSCNPAIGGLGKGHLVR 81 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDALDG+MGR+AD AGIQFR+LN KGPAVRGPR+Q DR LYR AMQ E+ S NLD+I Sbjct: 82 EIDALDGVMGRMADKAGIQFRMLNRSKGPAVRGPRSQIDRRLYREAMQAELFSTGNLDII 141 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 E ++ V R V+LTTGTFL+GVIH G+ +IPAGR+GD P+ Sbjct: 142 AAAAEDLIVEDGKVAGAVDAAGQAYRAPRVILTTGTFLKGVIHRGEDRIPAGRVGDQPAI 201 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 L + F GRLKTGTPARLDGKTI WD+ E Q AD+ +PFS++ +I QI C Sbjct: 202 GLSDRLYGLGFQMGRLKTGTPARLDGKTIAWDRLESQAADDTPVPFSYLNHRIDVPQIAC 261 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 G+T T ETHRII E I S +YSG GPRYCPSIEDK+VRF ++ HQIFLEPEGL Sbjct: 262 GVTYTTEETHRIIAERIGESLVYSGRATGVGPRYCPSIEDKVVRFADKTSHQIFLEPEGL 321 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + D VYPNGIST++ EE Q F+RTIPGLE+V +IR GYAIEYDY++P+EL+PTLETK++ Sbjct: 322 DDDTVYPNGISTSVSEETQLLFLRTIPGLEQVEVIRYGYAIEYDYVDPRELYPTLETKRL 381 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GL+LAGQINGTTGYEEA AQGLVAG+N+A + F+R ++YIGVMIDDL ++GV Sbjct: 382 PGLYLAGQINGTTGYEEAGAQGLVAGLNAALAVQGREPAIFARDEAYIGVMIDDLVTRGV 441 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAE+R++LR DNAD RL+ G+ LG +G R + + + R+ +S Sbjct: 442 TEPYRMFTSRAEFRLTLRADNADQRLSDRGISLGVVGPVRAAAWTEKKARLDAARAFARS 501 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + LT DG R + L+YPD ++ +L I P+ +++ V E+++IE+ Sbjct: 502 VTLTPNEAVKAGFKVNSDGVRRDVFAMLAYPDVTLDDLGRIWPEVFTWNTDVREQIEIEA 561 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 +YA Y RQ +A+ ++ +E +P D DY+ + +LSNE++ KL+ ++P L QA++IEG Sbjct: 562 AYAGYLDRQRADAESLRKDEDLRLPADLDYAEIGSLSNEVRGKLARVRPLTLGQAARIEG 621 Query: 601 MTPAALNLLLIYIKKN 616 +TP AL LL ++++ Sbjct: 622 VTPGALTALLAHVRRG 637 >gi|27375744|ref|NP_767273.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bradyrhizobium japonicum USDA 110] gi|81170530|sp|Q89WP5|MNMG_BRAJA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|27348882|dbj|BAC45898.1| glucose inhibited division protein A [Bradyrhizobium japonicum USDA 110] Length = 626 Score = 692 bits (1786), Expect = 0.0, Method: Compositional matrix adjust. Identities = 338/620 (54%), Positives = 441/620 (71%), Gaps = 1/620 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 S+DVIVIGGGHAGCEAAA +A++GA+TAL+TH+ ST+G+MSCNPAIGGLGKGHLVRE+DA Sbjct: 7 SFDVIVIGGGHAGCEAAAASARMGAATALVTHRFSTVGAMSCNPAIGGLGKGHLVREVDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRV DA GIQFRVLN +KGPAVRGPR QADR+LY AMQ I E L VI+GE Sbjct: 67 LDGLMGRVGDAGGIQFRVLNRRKGPAVRGPRAQADRKLYAAAMQAAIRETEGLSVIEGEA 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + ++ + + D ++V+TTGTFLRG+IH+G+ PAGR+G++P+ L + Sbjct: 127 DELIVVEGRVTGLRLADGREFGAGSIVVTTGTFLRGLIHLGEKNWPAGRVGEAPAMGLSS 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 SF + F GRLKTGTP RLDG TI W E Q DE PFS MTD+IT QI+CGITR Sbjct: 187 SFERAGFTLGRLKTGTPPRLDGTTIDWSAVEMQPGDEPPEPFSVMTDRITTPQIQCGITR 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T TH +I N+ S +YSG IKS GPRYCPSIEDKIVRFG+R+GHQIFLEPEGL+ Sbjct: 247 TTAATHEVIRANVHRSPMYSGQIKSSGPRYCPSIEDKIVRFGDRDGHQIFLEPEGLDDST 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LPEE+Q + +IPGLE+V ++RPGYAIEYD+I+P+EL PTL+TK++ GLF Sbjct: 307 VYPNGISTSLPEEVQLAILASIPGLERVKMVRPGYAIEYDHIDPRELDPTLQTKRLRGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEAA QG+VAG+N+A ++ F R D Y+GVMIDDL ++G+ EPY Sbjct: 367 LAGQINGTTGYEEAAGQGIVAGLNAALAASGAALTVFDRADGYLGVMIDDLVTRGISEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR++LR DNAD RLT G+ LGC+ R ++ N R+L KSL +T Sbjct: 427 RMFTSRAEYRLTLRADNADQRLTEKGIALGCVRSARTLHHRTKMEALNAARTLSKSLTIT 486 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 +S +DG+ R+A+E ++YPD + +I + ++ L+I++ Y Sbjct: 487 PNEAIKHGLSLNRDGQRRSAFELMAYPDIGWSQVRAIWLELSAIDPVIATHLEIDAKYDV 546 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + + + +E L+ + DY +P LSNE++ KL +PF + QA +I+GMTPA Sbjct: 547 YLERQSADVEAFRRDEG-LVLSEVDYQLVPGLSNEVRAKLEKARPFTVGQAGRIDGMTPA 605 Query: 605 ALNLLLIYIKKNTVKLNEIV 624 AL +L Y+++ K ++ + Sbjct: 606 ALGILAAYLRREARKTSKAI 625 >gi|239977503|sp|P0CAV0|MNMG_CAUCR RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|239977561|sp|B8GW33|MNMG_CAUCN RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|5174778|gb|AAD40695.1| GidA [Caulobacter crescentus CB15] Length = 618 Score = 692 bits (1785), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/615 (54%), Positives = 435/615 (70%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +++S+DVIVIGGGHAGCEAAA +A+ GA T L+THK TIG MSCNPAIGGLGKGHLVRE Sbjct: 1 MSKSWDVIVIGGGHAGCEAAAASARAGARTLLLTHKLETIGEMSCNPAIGGLGKGHLVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDALDG+MGR+AD AGIQFR+LN KGPAVRGPR+Q DR LYR AMQ E+ S NLD+I Sbjct: 61 IDALDGVMGRMADKAGIQFRMLNRSKGPAVRGPRSQIDRRLYREAMQAELFSTGNLDIIA 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 E ++ V R V+LTTGTFL+GVIH G+ +IPAGR+GD P+ Sbjct: 121 AAAEDLIVEDGKVAGAVDAAGQAYRAPRVILTTGTFLKGVIHRGEDRIPAGRVGDQPAIG 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L + F GRLKTGTPARLDGKTI WD+ E Q AD+ +PFS++ +I QI CG Sbjct: 181 LSDRLYGLGFQMGRLKTGTPARLDGKTIAWDRLESQAADDTPVPFSYLNHRIDVPQIACG 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T T ETHRII E I S +YSG GPRYCPSIEDK+VRF ++ HQIFLEPEGL+ Sbjct: 241 VTYTTEETHRIIAERIGESLVYSGRATGVGPRYCPSIEDKVVRFADKTSHQIFLEPEGLD 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 D VYPNGIST++ EE Q F+RTIPGLE+V +IR GYAIEYDY++P+EL+PTLETK++ Sbjct: 301 DDTVYPNGISTSVSEETQLLFLRTIPGLEQVEVIRYGYAIEYDYVDPRELYPTLETKRLP 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GL+LAGQINGTTGYEEA AQGLVAG+N+A + F+R ++YIGVMIDDL ++GV Sbjct: 361 GLYLAGQINGTTGYEEAGAQGLVAGLNAALAVQGREPAIFARDEAYIGVMIDDLVTRGVT 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAE+R++LR DNAD RL+ G+ LG +G R + + + R+ +S+ Sbjct: 421 EPYRMFTSRAEFRLTLRADNADQRLSDRGISLGVVGPVRAAAWTEKKARLDAARAFARSV 480 Query: 482 VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 LT DG R + L+YPD ++ +L I P+ +++ V E+++IE++ Sbjct: 481 TLTPNEAVKAGFKVNSDGVRRDVFAMLAYPDVTLDDLGRIWPEVFTWNTDVREQIEIEAA 540 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ +A+ ++ +E +P D DY+ + +LSNE++ KL+ ++P L QA++IEG+ Sbjct: 541 YAGYLDRQRADAESLRKDEDLRLPADLDYAEIGSLSNEVRGKLARVRPLTLGQAARIEGV 600 Query: 602 TPAALNLLLIYIKKN 616 TP AL LL ++++ Sbjct: 601 TPGALTALLAHVRRG 615 >gi|85714096|ref|ZP_01045085.1| glucose-inhibited division protein A [Nitrobacter sp. Nb-311A] gi|85699222|gb|EAQ37090.1| glucose-inhibited division protein A [Nitrobacter sp. Nb-311A] Length = 623 Score = 691 bits (1782), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/615 (55%), Positives = 433/615 (70%), Gaps = 1/615 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIVIGGGHAGCEAAA +A++GA TAL+TH+ +T+G+MSCNPAIGGLGKGHLVRE+DA Sbjct: 4 TFDVIVIGGGHAGCEAAAASARIGARTALVTHRFATVGAMSCNPAIGGLGKGHLVREVDA 63 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGR+ADAAGIQFR+LN +KGPAVRGPR Q DR+LY AMQ I NL+VI GE Sbjct: 64 LDGLMGRMADAAGIQFRMLNRRKGPAVRGPRAQEDRKLYAAAMQVAIRETANLEVIVGEA 123 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 I I + D R + VV+TTGTFLRG+IH+G+ PAGR+ ++P+ L Sbjct: 124 DDLIISDGRIGGIRLIDGRQFRSAAVVVTTGTFLRGLIHLGEKSWPAGRVDEAPALGLSR 183 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 SF + F GRLKTGTP RLDG TI W E Q D+ PFS MT +IT QIECGITR Sbjct: 184 SFERIGFTLGRLKTGTPPRLDGATIGWAAVEMQPGDDPPEPFSVMTGRITTPQIECGITR 243 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T TH +I N++ S IYSG I S GPRYCPSIEDK+VRFG+R+GHQIFLEPEGL+ Sbjct: 244 TTPATHEVIRVNVRRSPIYSGQITSSGPRYCPSIEDKVVRFGDRDGHQIFLEPEGLDDPT 303 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LPE++Q + TIPGLEKV + RPGYAIEYD+++P+EL PTL+T+++ GLF Sbjct: 304 VYPNGISTSLPEDVQLAILATIPGLEKVRMTRPGYAIEYDHVDPRELDPTLQTRRMPGLF 363 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEAAAQGLVAG+N+A + D I F R D Y+GVMIDDL ++G+ EPY Sbjct: 364 LAGQINGTTGYEEAAAQGLVAGLNAALGAGGGDPIVFDRADGYLGVMIDDLVTRGITEPY 423 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR++LR DNAD RLT G+ LGC+G R I ++L SL +T Sbjct: 424 RMFTSRAEYRLTLRADNADQRLTDKGIALGCVGAGRAAHHRAKIAALRAAKALAMSLSVT 483 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + +S +DG R+A+E LSYPD + + +I P+ + L+I++ Y Sbjct: 484 PNEAACHGLSLNRDGHRRSAFELLSYPDIGWREVAAIWPELSAVDPKIAVHLEIDAKYDV 543 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + + + +E L+ DYS +P LSNE + +L +P + QA +++G+TPA Sbjct: 544 YLKRQTADVEAFRRDEG-LVLTGIDYSVVPGLSNEARGRLEKAQPRTIGQAGRLDGITPA 602 Query: 605 ALNLLLIYIKKNTVK 619 AL +L Y+++ T K Sbjct: 603 ALGILAAYLRRETRK 617 >gi|296445002|ref|ZP_06886963.1| glucose inhibited division protein A [Methylosinus trichosporium OB3b] gi|296257423|gb|EFH04489.1| glucose inhibited division protein A [Methylosinus trichosporium OB3b] Length = 615 Score = 689 bits (1779), Expect = 0.0, Method: Compositional matrix adjust. Identities = 340/603 (56%), Positives = 425/603 (70%), Gaps = 1/603 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M SYDVIVIGGGHAGCEAAA +A+LGA T L+TH TIG+MSCNPAIGGLGKG LVR Sbjct: 1 MTRSSYDVIVIGGGHAGCEAAAASARLGARTVLVTHSRDTIGAMSCNPAIGGLGKGQLVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDALDGLMGRVADAAGIQFR+LN KGPAVRGPR QADR+LYR AMQ I + LDV+ Sbjct: 61 EIDALDGLMGRVADAAGIQFRLLNRSKGPAVRGPRAQADRKLYRAAMQAAIAAIPGLDVV 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 +G V + + + ++R VVLTTGTFL GVIHIG+ +IPAGRMG+ P+ Sbjct: 121 EGAVERLVVADGRVCGVEI-GCMVVRAGAVVLTTGTFLNGVIHIGEKRIPAGRMGEQPAI 179 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 L + F T RLKTGTP RLDG+TI W+K E+Q DE PFSF+T +I N QI+C Sbjct: 180 GLAEDLRRIGFATRRLKTGTPPRLDGRTIAWEKLERQSGDETPEPFSFLTTRIGNPQIDC 239 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 ITRTN H++I++N+ S + SG I GPRYCPSIEDK+ RFG+R HQIFLEPEGL Sbjct: 240 HITRTNAAAHKVILDNLDRSPLRSGAISGPGPRYCPSIEDKVTRFGDREAHQIFLEPEGL 299 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + D VYPNG+ST+LPEE+QH FIR+I GLE+ +I+RPGYAIEYD+++P+EL LETKKI Sbjct: 300 DDDTVYPNGVSTSLPEEVQHHFIRSIEGLEQAHILRPGYAIEYDFVDPRELGANLETKKI 359 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQ+NGTTGYEEAAAQGLVAG+N+A +++ I F R ++YIGVMIDDL ++GV Sbjct: 360 EGLFFAGQLNGTTGYEEAAAQGLVAGLNAAVRASGGAPILFDRAEAYIGVMIDDLVTRGV 419 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+SLR DNAD RLTP G+ +GC+G R F + + R+LL Sbjct: 420 SEPYRMFTSRAEYRLSLRADNADERLTPRGLAIGCVGAERAAAFGERRTRLDNARALLDG 479 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 L LT+ + + QDG+ R+A+ LSYP + L I P R++ ++ Sbjct: 480 LTLTTAAAARHGLPINQDGQRRSAFALLSYPGIDLVRLRDIWPQLCSIDDETAARVETDA 539 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 YA Y RQ + + +E+ +P+ DY + LS EL+ KL+ L+P L QA +IEG Sbjct: 540 RYAVYLERQTADIDAYRRDEQLTLPETIDYRQIGGLSAELRAKLAFLRPRTLGQAQRIEG 599 Query: 601 MTP 603 +TP Sbjct: 600 ITP 602 >gi|149912890|ref|ZP_01901424.1| glucose-inhibited division protein A [Roseobacter sp. AzwK-3b] gi|149813296|gb|EDM73122.1| glucose-inhibited division protein A [Roseobacter sp. AzwK-3b] Length = 623 Score = 689 bits (1779), Expect = 0.0, Method: Compositional matrix adjust. Identities = 342/611 (55%), Positives = 438/611 (71%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DVIVIGGGHAGC+AA AA++GA TAL+T S IG MSCNPAIGGLGKGHLVREID Sbjct: 5 KHFDVIVIGGGHAGCDAACAAARVGARTALVTLNKSGIGVMSCNPAIGGLGKGHLVREID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 +LDG+MGRVAD AGIQFR+LN +KGPAV+GPR QADR+LYR AM EI +Q L +I+GE Sbjct: 65 SLDGVMGRVADKAGIQFRLLNRRKGPAVQGPRAQADRKLYREAMLSEIENQPGLSIIEGE 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 A ++ IV+ D S I VVLTTGTFLRGVIHIG + P GRMGD PS L Sbjct: 125 AADVLMNGERVTGIVLADGSEISAGAVVLTTGTFLRGVIHIGDVSRPGGRMGDKPSIKLA 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 F GRLKTGTP RLDGKTI WD EKQ D+ + FSF++D T RQI CGIT Sbjct: 185 ERLDSFALKLGRLKTGTPPRLDGKTIDWDSLEKQPGDDDPVLFSFLSDAPTARQISCGIT 244 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH II +N+ SA+Y G I GPRYCPSIEDKIVRF ++ HQIFLEPE L+ D Sbjct: 245 HTNEQTHAIIRDNLDRSAMYGGHIDGVGPRYCPSIEDKIVRFADKTSHQIFLEPESLSDD 304 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 ++YPNGIST+LPE++Q ++R+I GLE I++PGYAIEYDY++P+ L TL K + GL Sbjct: 305 LIYPNGISTSLPEDVQQDYVRSIAGLEHAVIVQPGYAIEYDYVDPRALDATLAVKAVPGL 364 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 +LAGQINGTTGYEEAAAQGLVAG+N+A + + D + FSR+DSYIGVM+DDL ++GV EP Sbjct: 365 YLAGQINGTTGYEEAAAQGLVAGLNAALAAQERDPLLFSRSDSYIGVMVDDLITRGVSEP 424 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R+SLR DNAD RLTP+G+ G +G +R + FA+ ++ + R+ L + Sbjct: 425 YRMFTSRAEFRLSLRADNADQRLTPLGIATGLVGPQRSQAFAQKMERLDAARARLDAASF 484 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 T ++L T + QDG RTA++ L++PD +L ++ +L+ ++ YA Sbjct: 485 TPRDLIKTGLKINQDGSRRTAFQLLAFPDIDFSHLLTLDQTLADIDEASRAQLEKDALYA 544 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y RQ + + +K +E + IP D D+S++ LSNELK KL+ +P NL QAS+I+GMTP Sbjct: 545 NYIQRQNRDVEMMKRDEAQEIPSDLDFSTIDGLSNELKTKLTAARPANLAQASRIDGMTP 604 Query: 604 AALNLLLIYIK 614 AAL LL+ ++ Sbjct: 605 AALTLLMSRLR 615 >gi|260431965|ref|ZP_05785936.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Silicibacter lacuscaerulensis ITI-1157] gi|260415793|gb|EEX09052.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Silicibacter lacuscaerulensis ITI-1157] Length = 625 Score = 689 bits (1778), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/611 (54%), Positives = 436/611 (71%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIG GHAG EAA AA++GA+TAL+T IG MSCNPAIGGLGKGHLVREIDAL Sbjct: 9 FDVIVIGAGHAGTEAAHAAARMGANTALVTLSERDIGVMSCNPAIGGLGKGHLVREIDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DG+MGRVAD AGIQFR+LN +KGPAV+GPR QADR LYR AMQ EIL+ ENL V+ GEV Sbjct: 69 DGVMGRVADKAGIQFRLLNRRKGPAVQGPRAQADRALYRAAMQAEILNCENLTVVPGEVV 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 F + ++ +V+ D S I V+LT+GTFLRGVIHIG ++ P GRMGD PS L Sbjct: 129 DFRMDGPRVAGVVLADGSEIPSKAVILTSGTFLRGVIHIGDVQRPGGRMGDRPSVRLAER 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 +D TGRLKTGTP RLDG+TI W E Q D FSF+++++ QI CGIT T Sbjct: 189 LDSYDLPTGRLKTGTPPRLDGRTIDWTGLELQDGDSDPTLFSFLSNRVVAPQISCGITHT 248 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N TH II +N+ SA+Y G I+ GPRYCPSIEDKIVRF E+ HQIFLEPEG N + Sbjct: 249 NSRTHEIIEKNLSRSAMYGGHIEGIGPRYCPSIEDKIVRFAEKASHQIFLEPEGANDHTI 308 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YPNGIST+LP+++Q +++RTI GLE I++PGYAIEYDYI+P+ L +L + GL+L Sbjct: 309 YPNGISTSLPQDVQVEYVRTIKGLENAEILQPGYAIEYDYIDPRVLTASLALPDVPGLYL 368 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAAAQGLVAG+N+A D + F+R++SYIGVMIDDLT++GV EPYR Sbjct: 369 AGQINGTTGYEEAAAQGLVAGLNAALAVQGRDPLHFTRSNSYIGVMIDDLTTRGVSEPYR 428 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAE+R+SLR DNAD RLTP G+++GC+GE+R+ F + +++ ++ L + T Sbjct: 429 MFTSRAEFRLSLRADNADQRLTPCGLEIGCVGEKRRIAFQEKMEKLGSVKQKLVAQTYTP 488 Query: 486 KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAY 545 K + + I QDG R L++P+ + ++L + + +++ ++ YA Y Sbjct: 489 KQIQAAGIEVNQDGNRRDGMSILAFPNVTFEDLLPLVEGLDAVEPDIRRQVERDALYANY 548 Query: 546 TGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAA 605 RQ + + +K +E IP DFDYSSL LS+E+KE+L+ +P N+ QAS+IEG+TPAA Sbjct: 549 IARQQRDVEAMKRDESYEIPPDFDYSSLDGLSSEMKERLTQARPANIAQASRIEGITPAA 608 Query: 606 LNLLLIYIKKN 616 L L+L ++++ Sbjct: 609 LTLVLAKLRRD 619 >gi|161170270|gb|ABX59240.1| division protein A [uncultured marine bacterium EB000_55B11] gi|297183799|gb|ADI19922.1| hypothetical protein [uncultured marine bacterium EB000_55B11] Length = 627 Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust. Identities = 352/617 (57%), Positives = 436/617 (70%), Gaps = 1/617 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIGGGHAG +AA A + GA TALITHK TIG MSCNPAIGGLGKGHLVREID Sbjct: 8 KQYDVIVIGGGHAGADAAHAAWRSGAKTALITHKFKTIGEMSCNPAIGGLGKGHLVREID 67 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDGLMGRVAD +GIQFR+LN KKGPAV+GPRTQADR LYR AMQ+E + LD+I+ E Sbjct: 68 ALDGLMGRVADKSGIQFRLLNRKKGPAVQGPRTQADRALYRTAMQKEFIGAAGLDIIESE 127 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V+ N + +++ D S I TVVLTTGTFLRG+IHIG + P GRMGD P+ L Sbjct: 128 VSDLIMRNNKVRGVILSDKSQINAPTVVLTTGTFLRGIIHIGDVSRPGGRMGDKPAIPLA 187 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT-NRQIECGI 242 F GRLKTGTP RLD ++I W+ E Q AD+ FSF++ K RQI+CGI Sbjct: 188 ERLDSFGLPLGRLKTGTPPRLDARSINWNVLETQSADDDPALFSFLSKKSDIPRQIKCGI 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II EN+ SA+YSG I GPRYCPSIEDKIVRF E++ HQ+FLEPEGLN Sbjct: 248 THTNTNTHSIIQENLSKSAMYSGKIDGVGPRYCPSIEDKIVRFSEKDSHQVFLEPEGLND 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNGIST+LPE++Q++++ ++ GLE II+PGYAIEYDY++P+ L TLE K I G Sbjct: 308 HTIYPNGISTSLPEDVQNEYVHSMLGLENAKIIQPGYAIEYDYVDPRALKHTLELKDIGG 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+LAGQINGTTGYEEAAAQGLVAG+N+AR + D I F R +YIGVMIDDL ++GV E Sbjct: 368 LYLAGQINGTTGYEEAAAQGLVAGLNAARAALGKDSIIFDRAQAYIGVMIDDLVTRGVSE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+SLR DNAD RLT +G + G + E+RQ F K + + + LL S + Sbjct: 428 PYRMFTSRAEYRLSLRADNADQRLTNLGFECGLVSEKRQYIFEKKMDAIDKAKILLNSYL 487 Query: 483 LTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSY 542 +T IS KQDG R+A E LS+ D S L + PD K + V ++L+ ++ Y Sbjct: 488 ITPTQAKKAGISIKQDGIRRSAMELLSFKDVSFDKLGCMWPDLSKINQEVRDQLEKDAIY 547 Query: 543 AAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMT 602 Y RQ ++ +EK +IP++F+YS + LSNELK+KL +P +L QA +IEGMT Sbjct: 548 INYIDRQSAAVNAMRKDEKLIIPENFNYSDISGLSNELKQKLMHSRPTSLAQAGRIEGMT 607 Query: 603 PAALNLLLIYIKKNTVK 619 PA L L+L I+K VK Sbjct: 608 PAGLALILTSIRKFDVK 624 >gi|90421002|ref|ZP_01228906.1| glucose-inhibited division protein A [Aurantimonas manganoxydans SI85-9A1] gi|90334780|gb|EAS48556.1| glucose-inhibited division protein A [Aurantimonas manganoxydans SI85-9A1] Length = 622 Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust. Identities = 337/618 (54%), Positives = 448/618 (72%), Gaps = 1/618 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + S+DV+VIGGGHAGCEAA+ AA+ GA TAL+TH+ TIG+MSCNPAIGG+GKGHLVRE Sbjct: 1 MEHSFDVVVIGGGHAGCEAASAAARAGARTALVTHRFDTIGAMSCNPAIGGIGKGHLVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL GLMG+VADAAGIQFR+LN +KGPAVRGPRTQADR LYR AMQ I +Q L+V++ Sbjct: 61 IDALGGLMGQVADAAGIQFRLLNRRKGPAVRGPRTQADRRLYREAMQAAIRAQSGLEVVE 120 Query: 122 GEVAGFN-TEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 G+VA + N ++ IV+ D + C VVLTTGTFL G+IHIG KIPAGRMG+ PS Sbjct: 121 GDVADLTLDDANRVTGIVLGDGGTMACRAVVLTTGTFLSGLIHIGDQKIPAGRMGEDPST 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 L + + GRLKTGTPARLDG+TI W ++Q D+ +PFS++T I NRQI+C Sbjct: 181 GLSGTLSRLGLTLGRLKTGTPARLDGRTIDWAGLDRQAPDDVPVPFSYLTTTIANRQIDC 240 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 GITRT ETH II +N+ SA+YSG I GPRYCPSIEDKIV+FG+R+GHQIFLEPEGL Sbjct: 241 GITRTTPETHAIIRDNLGRSALYSGQIAGNGPRYCPSIEDKIVKFGDRDGHQIFLEPEGL 300 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + D++YPNG+ST+LPE++Q F+R+IPGLE+V + +PGYAIEYD+++P+EL L ++ Sbjct: 301 DDDIIYPNGLSTSLPEDVQTLFLRSIPGLERVELRKPGYAIEYDHVDPRELDRRLAVRRA 360 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLFLAGQINGTTGYEEAAAQGL+AG+N+A + + R D+YIGVMIDDLT GV Sbjct: 361 EGLFLAGQINGTTGYEEAAAQGLIAGLNAALLAAGSKAVTIGRADAYIGVMIDDLTRTGV 420 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAE+R+SLR DNAD RLTP+G+ L I R+ F R+ L++ Sbjct: 421 SEPYRMFTSRAEFRLSLRADNADRRLTPLGLSLAIIDAERRTVFEASEAALEAARTQLEA 480 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 LT + DG+ R+A++ LS D + L + P+ + + + ER++IE+ Sbjct: 481 STLTPSEAQRHGLPVNLDGRRRSAWQLLSQTDVDLDRLAIVWPELAEVAGPIRERIEIEA 540 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 +Y Y RQ + + ++ +EKR +P D +Y ++ LSNEL++KL+ +P ++ +A I+G Sbjct: 541 AYDVYLDRQRKDQERLRRDEKRALPADLNYMAMVGLSNELRQKLTDRRPASIAEAEAIDG 600 Query: 601 MTPAALNLLLIYIKKNTV 618 MTPAAL ++L+ +++ + Sbjct: 601 MTPAALAIILVALRRAEI 618 >gi|163732964|ref|ZP_02140408.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Roseobacter litoralis Och 149] gi|161393499|gb|EDQ17824.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Roseobacter litoralis Och 149] Length = 623 Score = 687 bits (1774), Expect = 0.0, Method: Compositional matrix adjust. Identities = 335/616 (54%), Positives = 430/616 (69%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DV+VIGGGHAG EAA AA++GA T LIT S IG MSCNPAIGGLGKGHLVREID Sbjct: 5 KHFDVLVIGGGHAGTEAAHAAARMGAVTGLITMSKSGIGVMSCNPAIGGLGKGHLVREID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDG+MGRVAD AGIQFR+LN +KGPAV+GPR Q+DR +Y M Q+N+D++ GE Sbjct: 65 ALDGVMGRVADLAGIQFRLLNRRKGPAVQGPRAQSDRAIYHHKMLEATEQQQNIDIVIGE 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 F + + ++ +V+ D S I TV+LTTGTFLRGVIHIG + GRMGD S L Sbjct: 125 AVDFVMDGDRVAGVVLDDGSHILSRTVILTTGTFLRGVIHIGDVSRSGGRMGDKASVRLA 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + F GRLKTGTP RL K+I WD E+Q DE FSFM+ +T RQ+ CGIT Sbjct: 185 DRIDSFALPMGRLKTGTPPRLSSKSIRWDILEEQPGDEEPTLFSFMSKGVTARQVSCGIT 244 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH II ENI SA+Y G I GPRYCPSIEDKI+RF +++ HQIFLEPEGL+TD Sbjct: 245 HTNEKTHDIIRENIALSAMYGGHIDGVGPRYCPSIEDKILRFADKDSHQIFLEPEGLSTD 304 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNGIST+LPEE+Q ++ +IPGLE I++PGYAIEYDY++P+ L +L + + GL Sbjct: 305 AVYPNGISTSLPEEVQTAYVHSIPGLENAVILQPGYAIEYDYVDPRALDSSLSVQLVPGL 364 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 +LAGQINGTTGYEEAAAQGLVAG+N++ ++ D + FSR+DSYIGVMIDDLT++GV EP Sbjct: 365 YLAGQINGTTGYEEAAAQGLVAGLNASLEARDHDPVVFSRSDSYIGVMIDDLTTRGVTEP 424 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R+SLR DNAD RLTP+G+ LGC+ + R++ F + R +L Sbjct: 425 YRMFTSRAEFRLSLRADNADQRLTPLGLDLGCVSDERKRAFEEKSTALEGARRILSGSSY 484 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 T K + IS +DG RTA + L++PD + +++ + P V +++ E+ YA Sbjct: 485 TPKQAAEVGISISKDGSRRTAMQLLAFPDTTFKDIALLDPSLHSIDPEVQRQMEREALYA 544 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y RQ + +K +E IP DFDY L LSNEL KL+ +P +L Q S+I+GMTP Sbjct: 545 NYIDRQQKDVDLLKKDEAHKIPTDFDYDQLGGLSNELTAKLNQTRPTSLAQVSRIDGMTP 604 Query: 604 AALNLLLIYIKKNTVK 619 AAL L+L +++N K Sbjct: 605 AALTLILAKLRQNARK 620 >gi|254420248|ref|ZP_05033972.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Brevundimonas sp. BAL3] gi|196186425|gb|EDX81401.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Brevundimonas sp. BAL3] Length = 630 Score = 686 bits (1771), Expect = 0.0, Method: Compositional matrix adjust. Identities = 335/611 (54%), Positives = 428/611 (70%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDV+VIGGGHAGCEAAA +++ GA T L+T K TIG MSCNPAIGGLGKGHLVREIDA Sbjct: 8 SYDVVVIGGGHAGCEAAAASSRAGARTLLLTQKLETIGEMSCNPAIGGLGKGHLVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDG+MGR+AD +GIQFR+LN KG AVRGPR+Q DR LYR AMQ E+ NL ++ G Sbjct: 68 LDGIMGRLADVSGIQFRLLNRSKGAAVRGPRSQIDRRLYREAMQAELARTPNLSLMAGTA 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 G + + + + +R VVLTTGTFL GVIH G +IPAGR G+ PS L Sbjct: 128 EGLILDGDRVVGVTTGTGERVRAGAVVLTTGTFLNGVIHRGDERIPAGRHGEDPSTGLAA 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 D GRLKTGTPARLDG+TI WD+ E Q ADE FSFMTD+I QI CG+T Sbjct: 188 DLHAADLMMGRLKTGTPARLDGRTIAWDRLEMQQADETPSAFSFMTDRIDVPQIACGVTH 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETHRII EN+ SA+Y G + GPRYCPSIEDK+VRF ++ HQIFLEPEGL+ Sbjct: 248 TTEETHRIIAENLGESAVYGGKLSGRGPRYCPSIEDKVVRFADKTSHQIFLEPEGLDDPT 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST++ E Q F+RTIPGLE V + R GYAIEYDY++P+EL P LE KK GL+ Sbjct: 308 VYPNGISTSVSEPTQLAFLRTIPGLEAVEVFRYGYAIEYDYVDPRELSPALEVKKRPGLY 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEAAAQGL+AG+N+AR + + + R +YIGVMIDDL ++GV EPY Sbjct: 368 LAGQINGTTGYEEAAAQGLMAGLNAARTAGEDAPVILGRDQAYIGVMIDDLVTRGVTEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR++LR DNAD RLTP+ + LG +G R+K F Q+ + + + + T Sbjct: 428 RMFTSRAEYRLTLRADNADQRLTPLAIALGIVGPERRKCFELKAQKLSEAGIVSRETLFT 487 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 K ++ I DG+ R+ E L++PD ++ + P + + V E+++I++ YA Sbjct: 488 PKEANAIGIPVNADGRRRSMRELLAFPDVTLDHFVQTHPVVASWDAEVREQVEIDAGYAN 547 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ+I+A+ ++ EE L+P D DY+++ +LSNE+KEKL+ ++P L QA +IEGMTP Sbjct: 548 YLDRQLIDAEALRTEEGLLLPTDLDYAAIGSLSNEVKEKLARVQPRTLGQAGRIEGMTPG 607 Query: 605 ALNLLLIYIKK 615 AL LL ++K+ Sbjct: 608 ALTALLAHVKR 618 >gi|328541701|ref|YP_004301810.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [polymorphum gilvum SL003B-26A1] gi|326411453|gb|ADZ68516.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Polymorphum gilvum SL003B-26A1] Length = 623 Score = 686 bits (1771), Expect = 0.0, Method: Compositional matrix adjust. Identities = 331/586 (56%), Positives = 420/586 (71%) Query: 31 TALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPA 90 T LITH+ TIG MSCNPAIGGLGKGHLVREIDALDGLMGRVAD AGIQFR+LN +KGPA Sbjct: 32 TVLITHRFDTIGVMSCNPAIGGLGKGHLVREIDALDGLMGRVADRAGIQFRLLNRRKGPA 91 Query: 91 VRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTV 150 VRGPR QADR LYR AMQ EI NL V+ GE ++ + + D I C V Sbjct: 92 VRGPRAQADRRLYREAMQAEIAETANLTVVGGEAERLEIHDGRVAGVTLTDGRRIACGAV 151 Query: 151 VLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTII 210 VLTTGTFLRG+IHIG KIPAGR+G+ P+ L S + F GRLKTGTPARLDG++I Sbjct: 152 VLTTGTFLRGLIHIGDRKIPAGRVGEGPAMGLSVSLEEIGFALGRLKTGTPARLDGRSID 211 Query: 211 WDKTEKQFADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSY 270 W + E+Q D+ +PFS +T IT Q+ C ITRT THRII EN+ SA+YSG+IK Sbjct: 212 WARLEEQPGDDDPVPFSTLTVAITTPQVPCHITRTTEATHRIIRENLSRSAMYSGEIKGR 271 Query: 271 GPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLE 330 GPRYCPSIEDKIVRFG+R+GHQIFLEPEGL+ VYPNGIST+LPE+ QH F+RTIPGLE Sbjct: 272 GPRYCPSIEDKIVRFGDRDGHQIFLEPEGLDDHTVYPNGISTSLPEDAQHAFLRTIPGLE 331 Query: 331 KVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSA 390 KV +++PGYAIEYD+++P+EL TLE ++ GLFLAGQINGTTGYEEA AQGL+AG+N+A Sbjct: 332 KVTVLQPGYAIEYDHVDPRELKATLEARRCRGLFLAGQINGTTGYEEAGAQGLLAGLNAA 391 Query: 391 RKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIG 450 + C R YIGVMIDDL ++G+ EPYRMFTSRAEYR+SLR DNAD RLTP+G Sbjct: 392 LAAGGGGCFTVDRAQGYIGVMIDDLVTRGITEPYRMFTSRAEYRLSLRADNADQRLTPLG 451 Query: 451 MKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSY 510 + LGC+ R+ F +++ R LL++L +T + QDG R+A++ LSY Sbjct: 452 IALGCVSATRRIAFETKLEKLEETRRLLEALTVTPAQARRQGLPVNQDGIRRSAFDLLSY 511 Query: 511 PDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDY 570 PD S + L + PD + + E++ ++ Y+ Y RQ + ++ +E IP+DFD+ Sbjct: 512 PDMSFERLKDVWPDLAGIEASIAEQVATDALYSVYLDRQAADIAALRRDEALAIPEDFDF 571 Query: 571 SSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKN 616 ++L LSNE+++KL ++P L QAS+++GMTPAAL LLL ++K+ Sbjct: 572 AALAGLSNEIRQKLETVRPATLGQASRMDGMTPAALTLLLSHVKRQ 617 >gi|114797761|ref|YP_762234.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Hyphomonas neptunium ATCC 15444] gi|122941979|sp|Q0BWA9|MNMG_HYPNA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|114737935|gb|ABI76060.1| glucose-inhibited division protein A [Hyphomonas neptunium ATCC 15444] Length = 621 Score = 685 bits (1767), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/610 (54%), Positives = 432/610 (70%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAGCEAAA +A+ GA TALITHK STIG MSCNPAIGGLGKGHLVREIDAL Sbjct: 7 FDVIVIGGGHAGCEAAAASARFGARTALITHKRSTIGEMSCNPAIGGLGKGHLVREIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DG+MGR+AD AGIQFR+LN KGPAV GPR+Q DR+LYR AMQ E+ NL +I+ Sbjct: 67 DGVMGRLADKAGIQFRMLNRSKGPAVWGPRSQIDRKLYREAMQSELADYPNLTIIEDGAE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E +I +V S VV+TTGTFL+G IHIG +IPAGR+G++P+ L + Sbjct: 127 DLIVEDGLIRGVVGLTGQRYGASKVVITTGTFLKGEIHIGAKRIPAGRIGEAPALGLSDR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 GRLKTGTPARLDG+TI WD+ E Q ADE+ IPFSF+ +IT RQ++CGIT T Sbjct: 187 LYSIGLPMGRLKTGTPARLDGRTIHWDRLEMQPADEQPIPFSFLNSEITVRQVQCGITWT 246 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 ETH II ++ SA+YSG I GPRYCPSIEDK+ RFG+R+ HQ+FLEPEGL+ V Sbjct: 247 TPETHAIIEAHMNESAVYSGAISGRGPRYCPSIEDKVNRFGDRDRHQVFLEPEGLDDHTV 306 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YPNGIST+LPEE+Q +FIRTIPGLE I++ YAIEYDY++P+ L P LE K + GL+L Sbjct: 307 YPNGISTSLPEEVQEKFIRTIPGLEDAVILQHAYAIEYDYVDPRALSPALEVKLMPGLYL 366 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEA AQGL+AG+N+AR ++ D + F R ++YIGV+IDDL ++GV EPYR Sbjct: 367 AGQINGTTGYEEAGAQGLMAGLNAARAASGKDPVIFDRAEAYIGVLIDDLVTRGVTEPYR 426 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAEYR++LR DNAD RLT G+ G + E R F + R+LLK+L L+ Sbjct: 427 MFTSRAEYRLALRADNADQRLTQRGIDAGVVCETRAAMFHVKHRALESARNLLKTLNLSP 486 Query: 486 KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAY 545 + QDG+ R+A+E+LSY + +L + P+ + ++ +++IE+ Y+AY Sbjct: 487 AAAVRNGWAVNQDGRIRSAWEYLSYKEICFDHLAQVWPELSAIPAEIVAQIEIEALYSAY 546 Query: 546 TGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAA 605 RQ + ++ +E IP D DY + LSNE+++KL ++P L QA +IEG+TP A Sbjct: 547 LDRQAEDVAALRRDEALSIPSDLDYDLIGGLSNEVRQKLKSVRPGTLGQAGRIEGVTPGA 606 Query: 606 LNLLLIYIKK 615 L LL ++++ Sbjct: 607 LTALLGHVRR 616 >gi|254475320|ref|ZP_05088706.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ruegeria sp. R11] gi|214029563|gb|EEB70398.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ruegeria sp. R11] Length = 624 Score = 685 bits (1767), Expect = 0.0, Method: Compositional matrix adjust. Identities = 325/603 (53%), Positives = 433/603 (71%), Gaps = 1/603 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M + +YDVIV+GGGHAG EAA +A++GA TAL+T IG MSCNPAIGGLGKGHLVR Sbjct: 1 MKHPNYDVIVVGGGHAGTEAAHASARMGARTALVTLTKDGIGVMSCNPAIGGLGKGHLVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDALDG+MGRVAD AGIQFR+LN +KGPAV+GPR Q+DR++YR M E +QENLD++ Sbjct: 61 EIDALDGVMGRVADKAGIQFRLLNRRKGPAVQGPRAQSDRKIYRREMLAETEAQENLDIV 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 GEV F ++ I + + D+S I V+LT+GTFLRGVIHIG + P GRMGD PS Sbjct: 121 AGEVVDFLITESTIHGVRLADDSEISAKAVILTSGTFLRGVIHIGDVSKPGGRMGDKPSV 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 L F+ GRLKTGTP RLDG+TI WD+ + Q D+ FSFMT+++ Q++C Sbjct: 181 RLAERLDSFELPLGRLKTGTPPRLDGRTIAWDQLDAQPGDDEPTFFSFMTNQLYAPQVDC 240 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 GIT TN +TH II +N++ SA+Y G I+ GPRYCPSIEDK+VRF ++ HQIFLEPEG Sbjct: 241 GITHTNEKTHEIIRQNLQRSAMYGGHIEGVGPRYCPSIEDKVVRFADKTSHQIFLEPEGA 300 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + VYPNGIST+LP EIQ ++ +I GLEK I++PGYAIEYDY++P+ L L K Sbjct: 301 DDHTVYPNGISTSLPVEIQEAYVHSIFGLEKAEILQPGYAIEYDYVDPRALGLDLALKSH 360 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 +GL+LAGQINGTTGYEEAAAQGLVAG+N+AR + + + + FSR++SYIGVMIDDLT+ GV Sbjct: 361 TGLYLAGQINGTTGYEEAAAQGLVAGLNAARFAKREEALTFSRSESYIGVMIDDLTTNGV 420 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAE+R+SLR DNAD RLT +G+++GC+GE+R+ F++ +++ + R+++ + Sbjct: 421 TEPYRMFTSRAEFRLSLRADNADQRLTGLGIEIGCVGEQRKVEFSEKMEKLDAARAVMDA 480 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 T K +++ I+ QDG RTA + L++PD ++ + P+ + +L+ ++ Sbjct: 481 RTFTPKEVNAAGIAVNQDGNKRTATDVLAFPDVGFDDILPLLPELMTCEDPIRRQLERDA 540 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 YA Y RQ E + +K +E IP+DF Y LSNELK KL +P L QA +++G Sbjct: 541 LYANYITRQKREIEALKRDEGHHIPRDFSY-DFEGLSNELKGKLERARPETLAQAGRVDG 599 Query: 601 MTP 603 MTP Sbjct: 600 MTP 602 >gi|86136757|ref|ZP_01055335.1| glucose-inhibited division protein A [Roseobacter sp. MED193] gi|85826081|gb|EAQ46278.1| glucose-inhibited division protein A [Roseobacter sp. MED193] Length = 627 Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/615 (54%), Positives = 429/615 (69%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 + +DV+VIGGGHAG EAA AA++G TALIT IG MSCNPAIGGLGKGHLVREI Sbjct: 6 HSDFDVVVIGGGHAGTEAAHAAARMGVRTALITLTREGIGVMSCNPAIGGLGKGHLVREI 65 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DA+DG+MG+VAD AGIQFR+LN +KGPAV+GPR Q+DR +YR M + QENL++I+G Sbjct: 66 DAMDGVMGKVADLAGIQFRLLNRRKGPAVQGPRAQSDRGIYRREMLKRTDVQENLEIIEG 125 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 E F + + +V+ D S IR V+LTTGTFLRGVIHIG + P GRMGD PS L Sbjct: 126 EATDFLMQGTAVQGVVLADGSEIRSRFVILTTGTFLRGVIHIGDVSKPGGRMGDRPSVKL 185 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGI 242 F GRLKTGTP RLDG+TI WD E Q DE FSFMT +++ +Q+ CGI Sbjct: 186 AERLDSFKLPMGRLKTGTPPRLDGRTINWDILEGQPGDEDPTFFSFMTKELSAKQVVCGI 245 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II +N+ SA+Y G I GPRYCPSIEDKIVRF ++ HQIFLEPEG Sbjct: 246 THTNEKTHEIIRDNLSRSAMYGGHIDGVGPRYCPSIEDKIVRFADKTSHQIFLEPEGATD 305 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 VYPNGIST+LP ++Q ++R+I GLEK I++PGYAIEYDYI+P+ L L K + G Sbjct: 306 HTVYPNGISTSLPVDVQADYVRSIVGLEKAEILQPGYAIEYDYIDPRALSLDLSLKDVPG 365 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+LAGQINGTTGYEEAAAQGLVAG+++A K + + + F R++SYIGVMIDDLT+ GV E Sbjct: 366 LYLAGQINGTTGYEEAAAQGLVAGLSAAAKCREQEPVMFGRSNSYIGVMIDDLTTHGVTE 425 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAE+R+SLR DNAD RLTP+ ++ GCI E R+ F ++ +R+ ++ V Sbjct: 426 PYRMFTSRAEFRLSLRADNADQRLTPLAIEAGCISEERKTAFTAKMEHLADIRAKMEDGV 485 Query: 483 LTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSY 542 T K +S I QDG RT +E L++PD ++L + P+ SS + +L+ ++ Y Sbjct: 486 FTPKQISEAGIYVNQDGNKRTGFEVLAFPDVCFEDLVPLLPECAHASSDIRRQLERDALY 545 Query: 543 AAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMT 602 Y RQ E +K +E +IP +FDY S+ LS EL++KLS +P L +AS+I GMT Sbjct: 546 VHYIARQEKEIAAVKRDEGYVIPPEFDYGSIDGLSAELQQKLSTTRPETLAKASRINGMT 605 Query: 603 PAALNLLLIYIKKNT 617 PA L L+L ++KN+ Sbjct: 606 PAGLALVLARLRKNS 620 >gi|114769774|ref|ZP_01447384.1| glucose-inhibited division protein A [alpha proteobacterium HTCC2255] gi|114549479|gb|EAU52361.1| glucose-inhibited division protein A [alpha proteobacterium HTCC2255] Length = 621 Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust. Identities = 351/617 (56%), Positives = 436/617 (70%), Gaps = 1/617 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIGGGHAG +AA A + GA TALITHK TIG MSCNPAIGGLGKGHLVREID Sbjct: 2 KQYDVIVIGGGHAGADAAHAAWRSGAKTALITHKFKTIGEMSCNPAIGGLGKGHLVREID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDGLMGRVAD +GIQFR+LN KKGPAV+GPRTQADR LYR AMQ+E + LD+I+ E Sbjct: 62 ALDGLMGRVADKSGIQFRLLNRKKGPAVQGPRTQADRALYRAAMQKEFIGVAGLDIIESE 121 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V+ N + +++ + S I TVVLTTGTFLRG+IHIG + P GRMGD P+ L Sbjct: 122 VSDLIMCNNKVRGVILSNKSQINAPTVVLTTGTFLRGIIHIGDVSRPGGRMGDKPAIPLA 181 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT-NRQIECGI 242 F GRLKTGTP RLD ++I W+ E Q AD+ FSF++ K RQI+CGI Sbjct: 182 ERLDSFGLPLGRLKTGTPPRLDARSINWNVLETQSADDDPALFSFLSKKSDIPRQIKCGI 241 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II EN+ SA+YSG I GPRYCPSIEDKIVRF E++ HQ+FLEPEGLN Sbjct: 242 THTNTNTHSIIQENLSKSAMYSGKIDGVGPRYCPSIEDKIVRFSEKDSHQVFLEPEGLND 301 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNGIST+LPE++Q++++ ++ GLE II+PGYAIEYDY++P+ L TLE K I G Sbjct: 302 HTIYPNGISTSLPEDVQNEYVHSMLGLENAKIIQPGYAIEYDYVDPRALKHTLELKDIGG 361 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+LAGQINGTTGYEEAAAQGLVAG+N+AR + D I F R +YIGVMIDDL ++GV E Sbjct: 362 LYLAGQINGTTGYEEAAAQGLVAGLNAARAALGKDSIIFDRAQAYIGVMIDDLVTRGVSE 421 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+SLR DNAD RLT +G + G + E+RQ F K + + + LL S + Sbjct: 422 PYRMFTSRAEYRLSLRADNADQRLTNLGFECGLVSEKRQYIFEKKMDAIDKAKILLNSYL 481 Query: 483 LTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSY 542 +T IS KQDG R+A E LS+ D S L + PD K + V ++L+ ++ Y Sbjct: 482 ITPTQAKKAGISIKQDGIRRSAMELLSFKDVSFDKLGCMWPDLSKINQEVRDQLEKDAIY 541 Query: 543 AAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMT 602 Y RQ ++ +EK +IP++F+YS + LSNELK+KL +P +L QA +IEGMT Sbjct: 542 INYIDRQSAAVNAMRKDEKLIIPENFNYSDISGLSNELKQKLMHSRPTSLAQAGRIEGMT 601 Query: 603 PAALNLLLIYIKKNTVK 619 PA L L+L I+K VK Sbjct: 602 PAGLALILTSIRKFDVK 618 >gi|220921038|ref|YP_002496339.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Methylobacterium nodulans ORS 2060] gi|219945644|gb|ACL56036.1| glucose inhibited division protein A [Methylobacterium nodulans ORS 2060] Length = 627 Score = 683 bits (1763), Expect = 0.0, Method: Compositional matrix adjust. Identities = 340/598 (56%), Positives = 433/598 (72%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAAA AA+ GA TAL+TH+ TIG+MSCNPAIGGLGKGHLVRE+DAL Sbjct: 9 FDVIVVGGGHAGAEAAAAAARTGARTALVTHRRDTIGAMSCNPAIGGLGKGHLVREVDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGLMGR AD AGIQFR+LN +KGPAVRGPRTQADR+LY A+Q + S L +++GE Sbjct: 69 DGLMGRAADRAGIQFRLLNRRKGPAVRGPRTQADRKLYARAIQAALGSVPGLTLVEGEAH 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + ++ IVM D + C+ VVLTTGTFLRG+IHIG+ PAGR+G++PS L + Sbjct: 129 DLTVTEGRVTGIVMADGRALPCAAVVLTTGTFLRGLIHIGERTTPAGRVGEAPSLGLAAT 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + F GRLKTGTPARLDG++I W E+Q AD+ +PFS MT++IT QIECG+TRT Sbjct: 189 LERHGFGLGRLKTGTPARLDGRSIDWAGVERQAADDEPVPFSTMTERITTPQIECGVTRT 248 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 H +I N+ S +YSG I S GPRYCPSIEDK+VRFG+R GHQIFLEPEGL+ V Sbjct: 249 TQSVHDLIRANLHRSPMYSGGITSRGPRYCPSIEDKVVRFGDREGHQIFLEPEGLDDLTV 308 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YPNGISTALPEE+Q + +R IPG E+ ++RPGYAIEYDY++P+EL PTL+T++I+GLFL Sbjct: 309 YPNGISTALPEEVQREILRLIPGCERARMLRPGYAIEYDYVDPRELDPTLQTRRIAGLFL 368 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAA QGLVAG+N+AR + D F R +SYIGVMIDDL + GV EPYR Sbjct: 369 AGQINGTTGYEEAAGQGLVAGLNAARLAGGADLAVFDRAESYIGVMIDDLVTHGVSEPYR 428 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSR+EYR+SLR DNAD RLTP G+ LGC+ R + FA + R+ L +L LT Sbjct: 429 MFTSRSEYRLSLRIDNADERLTPRGLALGCVSSERARHFAAGRTALSAARARLDALSLTP 488 Query: 486 KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAY 545 + +S +DG R+A++ LSYP+ S + L I P+ + + ERL+ +++YA Y Sbjct: 489 TEAAQHGLSLNRDGIRRSAFQLLSYPEISWECLAGIWPELGAIPAALAERLRTDATYAVY 548 Query: 546 TGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 RQ + + +E +P DYS + LSNEL+ KL ++P L QA++IEG+TP Sbjct: 549 LDRQQADIAAFRRDEAVRLPASLDYSRIAGLSNELRAKLEGVRPHTLGQAARIEGVTP 606 >gi|110677826|ref|YP_680833.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Roseobacter denitrificans OCh 114] gi|123172982|sp|Q16CZ6|MNMG_ROSDO RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|109453942|gb|ABG30147.1| glucose inhibited division protein A [Roseobacter denitrificans OCh 114] Length = 623 Score = 683 bits (1763), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/616 (54%), Positives = 431/616 (69%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DV+VIGGGHAG EAA AA++G+ T LIT S IG MSCNPAIGGLGKGHLVREID Sbjct: 5 KHFDVLVIGGGHAGTEAAHAAARMGSQTGLITMSRSGIGVMSCNPAIGGLGKGHLVREID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDG+MGRVAD AGIQFR+LN +KGPAV+GPR Q+DR +Y M Q+NLD+I GE Sbjct: 65 ALDGVMGRVADQAGIQFRLLNRRKGPAVQGPRAQSDRAIYHNRMLEATDQQQNLDIIVGE 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 F + + +V+QD++ I TV+LTTGTFLRGVIHIG + GRMGD S L Sbjct: 125 AVDFVMDGERVIGVVLQDDAEILAKTVILTTGTFLRGVIHIGDVSRSGGRMGDKASVRLA 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + F GRLKTGTP RL K+I WD E+Q D+ FSF++ ++ RQ+ CGIT Sbjct: 185 DRIDSFGLPMGRLKTGTPPRLSSKSINWDVLEEQPGDDEPTLFSFLSKGVSARQVSCGIT 244 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN+ TH II +NI SA+Y G I GPRYCPSIEDKI+RF ++ HQIFLEPEGLNTD Sbjct: 245 HTNVRTHDIIRDNITRSAMYGGHIDGVGPRYCPSIEDKIIRFADKESHQIFLEPEGLNTD 304 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNGIST+LP+++Q +++ +I GLEK I++PGYAIEYDY++P+ L +L + GL Sbjct: 305 AVYPNGISTSLPQDVQSEYVHSIVGLEKAIILQPGYAIEYDYVDPRALDSSLSVLSVPGL 364 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 +LAGQINGTTGYEEAAAQGLVAG+N++ ++ D I FSR+DSYIGVMIDDLT++GV+EP Sbjct: 365 YLAGQINGTTGYEEAAAQGLVAGLNASLEARGSDPITFSRSDSYIGVMIDDLTTRGVMEP 424 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R+SLR DNAD RLTPIG+ LGC+ + R++ F I+ + R LL Sbjct: 425 YRMFTSRAEFRLSLRADNADQRLTPIGLALGCVSDERKQAFEVKIEALDRARRLLTESSY 484 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 T K IS DG RTA + L++P+ S ++L + P ++++ E+ YA Sbjct: 485 TPKQAGEAGISVSHDGSRRTAMQLLAFPNTSFKDLSLLDPVFDGIDVETQQQMEREALYA 544 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y RQ + +K +E IP DFDY L LSNELK KL+ +P +L Q +I+GMTP Sbjct: 545 TYIERQQKDVDLLKKDEGHKIPADFDYDQLSGLSNELKSKLNSTRPTSLAQVGRIDGMTP 604 Query: 604 AALNLLLIYIKKNTVK 619 AAL L+L +++++ K Sbjct: 605 AALTLILAKLRQSSKK 620 >gi|92115737|ref|YP_575466.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Nitrobacter hamburgensis X14] gi|122418936|sp|Q1QRZ1|MNMG_NITHX RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|91798631|gb|ABE61006.1| glucose inhibited division protein A [Nitrobacter hamburgensis X14] Length = 624 Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust. Identities = 337/615 (54%), Positives = 433/615 (70%), Gaps = 1/615 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 S+DVIVIGGGHAGCEAA AA++GA TAL+TH+ ST+G+MSCNPAIGGLGKGHLVREIDA Sbjct: 4 SFDVIVIGGGHAGCEAATAAARMGARTALVTHRLSTVGAMSCNPAIGGLGKGHLVREIDA 63 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRVADAAGIQFR+LN +KGPAVRGPR Q DR+LY AMQ EI NL VI+GE Sbjct: 64 LDGLMGRVADAAGIQFRMLNRRKGPAVRGPRAQEDRKLYAAAMQAEIREAANLVVIEGEA 123 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 I+ I + D+ + VV+TTGTFLRG+IH+G+ PAGR+ ++P+ L Sbjct: 124 DDLIVADGRIAGIRLIDSRAFKTGAVVVTTGTFLRGLIHLGEKSWPAGRVDEAPALGLSV 183 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 SF + F GRLKTGTP RLDG TI W E Q D+ PFS MT +IT QI CGITR Sbjct: 184 SFERIGFTLGRLKTGTPPRLDGATIDWAAVEMQPGDDPPEPFSVMTSRITTPQIRCGITR 243 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T TH +I N+ S IYSG I+S GPRYCPS+EDK+VRFG+R+GHQIFLEPEGL+ Sbjct: 244 TMPATHEVIRANVHRSPIYSGQIRSSGPRYCPSLEDKVVRFGDRDGHQIFLEPEGLDDTT 303 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LPEE+Q + TIPGL KV +IRPGYAIEYD+++P+EL PTL+T+++ GLF Sbjct: 304 VYPNGISTSLPEEVQLAILATIPGLTKVRMIRPGYAIEYDHVDPRELDPTLQTRRLPGLF 363 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEAAAQGLVAG+N+A + D + F R D Y+GVMIDDL ++G+ EPY Sbjct: 364 LAGQINGTTGYEEAAAQGLVAGLNAALAAGGGDPVVFDRADGYLGVMIDDLVTRGITEPY 423 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR++LR DNAD RLT G+ +GC+G R + + ++L SL +T Sbjct: 424 RMFTSRAEYRLTLRADNADQRLTDKGIAMGCVGAGRAVHHRAKMAALSAAKALATSLSVT 483 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + +S +DG R+A+E L+YP+ + +I P+ V L+I++ Y Sbjct: 484 PNEAARYGLSLNRDGHRRSAFELLAYPEIGWGEVAAIWPELSAIDPGVAVHLEIDAKYDV 543 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + + + +E L+ D DY ++P LSNE + +L +P + QA +++G+TPA Sbjct: 544 YLKRQTADVEAFRRDES-LVLADVDYDAVPGLSNEARARLERARPRTVGQAGRLDGITPA 602 Query: 605 ALNLLLIYIKKNTVK 619 AL +L Y+++ K Sbjct: 603 ALGILAAYLRREARK 617 >gi|254436863|ref|ZP_05050357.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Octadecabacter antarcticus 307] gi|198252309|gb|EDY76623.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Octadecabacter antarcticus 307] Length = 625 Score = 680 bits (1754), Expect = 0.0, Method: Compositional matrix adjust. Identities = 330/618 (53%), Positives = 426/618 (68%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +YDVI+IGGGHAGCEAA +A+ G T LIT + S IG MSCNPAIGGLGKGHLVRE Sbjct: 4 VKHAYDVIIIGGGHAGCEAAHASARSGVRTLLITLRLSDIGVMSCNPAIGGLGKGHLVRE 63 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDALDG+MGR AD AGIQFR+LN +KGPAV+GPRTQADR LYR A+Q ++ NL+V + Sbjct: 64 IDALDGVMGRAADRAGIQFRLLNRRKGPAVQGPRTQADRALYRSAVQELTTARSNLEVRE 123 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 GEV + ++ + + ++D S I + VVLT+GTFLRGVIHIG + GRMGD PS + Sbjct: 124 GEVVDLSLDRGRVDGVTLKDGSRISATAVVLTSGTFLRGVIHIGNVAQAGGRMGDLPSIA 183 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L +D GRLKTGTP RLDG+TI WD E+Q AD FSFM +QI CG Sbjct: 184 LAERLSSYDLPLGRLKTGTPPRLDGRTIHWDGLERQDADVEPELFSFMHHSPFVKQIACG 243 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT TN +TH +I +N+K SA+Y G I GPRYCPSIEDK+VRF ++ HQIFLEPEGL Sbjct: 244 ITHTNPQTHEVIKKNLKRSAMYGGHIDGVGPRYCPSIEDKVVRFADKTSHQIFLEPEGLT 303 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 +YPNGIST+LP ++Q +++ +I GLE I++PGYAIEYDYI+P+ L LE K++ Sbjct: 304 DHTIYPNGISTSLPVDVQEEYVHSIVGLEDAKILQPGYAIEYDYIDPRSLSTQLELKRMP 363 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLFLAGQINGTTGYEEAAAQG+VAG+N+A + N D + F R+ SYIGVMIDDLT +GV Sbjct: 364 GLFLAGQINGTTGYEEAAAQGMVAGLNAAAQVNSRDPVLFDRSTSYIGVMIDDLTVRGVS 423 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAE+R+SLR DNAD RLTP G +GC+ + R F E + R +L + Sbjct: 424 EPYRMFTSRAEFRLSLRADNADQRLTPFGRGVGCVEDERWSVFINKTNELDHGREVLLGI 483 Query: 482 VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +S++L+ + DG RT + L+ ++ +L + P K + +L+ ++ Sbjct: 484 SASSRDLNKAGVKVSIDGPKRTLADALTIAGTTVNDLAELAPQLSKIPKDIASQLERDAL 543 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y+ Y RQM + + +K + +LIP D +Y S+ LSNELK KL P NL QAS+I+G+ Sbjct: 544 YSHYVDRQMRDIEGMKRDSCKLIPNDLNYGSISGLSNELKSKLKTALPDNLAQASRIDGI 603 Query: 602 TPAALNLLLIYIKKNTVK 619 TPAAL L+ IKK + Sbjct: 604 TPAALMLVAAEIKKRQTR 621 >gi|329891180|ref|ZP_08269523.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Brevundimonas diminuta ATCC 11568] gi|328846481|gb|EGF96045.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Brevundimonas diminuta ATCC 11568] Length = 637 Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust. Identities = 327/613 (53%), Positives = 424/613 (69%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 + ++DV+VIGGGHAGCEAA AA+ G T L+T K TIG MSCNPAIGGLGKGHLVREI Sbjct: 12 DHTFDVVVIGGGHAGCEAATAAARAGVRTLLLTQKLETIGEMSCNPAIGGLGKGHLVREI 71 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DALDG+MGR+AD +GIQFR+LN KG AVRGPR+Q DR LYR AMQ E+ NL ++ G Sbjct: 72 DALDGVMGRLADVSGIQFRMLNRSKGAAVRGPRSQIDRRLYREAMQAELADYPNLTLMAG 131 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 G + + + IR VVLTTGTFL GVIH G L+IPAGR G+ PS L Sbjct: 132 TAEGLILNGDRVVGVTTGAGETIRAGAVVLTTGTFLNGVIHRGDLRIPAGRFGEDPSTGL 191 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGI 242 D GRLKTGTPARLDG+TI WD+ E Q AD++ PFSF+TD+I QI CG+ Sbjct: 192 AGDLHDADLMMGRLKTGTPARLDGRTIAWDRLEMQAADDQPAPFSFLTDRIEVPQIACGV 251 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T T ETHRII EN+ SA+Y G + GPRYCPSIEDK+VRF ++ HQ+FLEPEGL+ Sbjct: 252 THTTEETHRIIAENLGESAVYGGRLSGRGPRYCPSIEDKVVRFADKTSHQVFLEPEGLDD 311 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 VYPNGIST++ + Q F+ T+PGLEKV + R GYAIEYDY++P+EL P LE KK G Sbjct: 312 PSVYPNGISTSVSDATQLAFLHTMPGLEKVEVFRFGYAIEYDYVDPRELTPALEVKKRPG 371 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+LAGQINGTTGYEEA AQGL+AG+N+AR + D + R +YIGVMIDDL ++GV E Sbjct: 372 LYLAGQINGTTGYEEAGAQGLIAGLNAARAAAGSDPLILGRDQAYIGVMIDDLVTRGVTE 431 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR++LR DNAD RLTP+G++ G + R K + + + + Sbjct: 432 PYRMFTSRAEYRLTLRADNADQRLTPLGIEAGIVSADRAKVWLDKADRLDRANRVSRETQ 491 Query: 483 LTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSY 542 T K + I+ DG+ R+ + L++P S+ S+ P+ +++ V E+++I++ Y Sbjct: 492 FTPKEAGALGITVNADGQRRSIRDLLAFPTVSLDQFVSVRPEIADWTAAVREQVEIDAVY 551 Query: 543 AAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMT 602 A Y RQ +A+ ++ EE +P D DY+++ ALSNE++EKL++++P L QA +IEGMT Sbjct: 552 AGYLDRQAQDAEALRREEGLSLPADLDYAAIGALSNEVREKLAMIRPLTLGQAGRIEGMT 611 Query: 603 PAALNLLLIYIKK 615 P AL LL ++KK Sbjct: 612 PGALTALLAHVKK 624 >gi|75674296|ref|YP_316717.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Nitrobacter winogradskyi Nb-255] gi|123614358|sp|Q3SWH6|MNMG_NITWN RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|74419166|gb|ABA03365.1| Glucose-inhibited division protein A subfamily [Nitrobacter winogradskyi Nb-255] Length = 623 Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust. Identities = 330/612 (53%), Positives = 429/612 (70%), Gaps = 1/612 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 S+DVIVIGGGHAGCEAAA +A+ GA TAL+TH+ +TIG+MSCNPAIGGLGKGHLVRE+DA Sbjct: 4 SFDVIVIGGGHAGCEAAAASARTGARTALVTHRFATIGAMSCNPAIGGLGKGHLVREVDA 63 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLM R+ADA GIQFR+LN +KGPAVRGPR Q DR+LY AMQ I NL+VI GE Sbjct: 64 LDGLMARIADAGGIQFRMLNRRKGPAVRGPRAQEDRKLYAAAMQAAIRETANLEVIDGEA 123 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 I+ + + D I+ + VV+TTGTFLRG+IH+G+ PAGR+ ++P+ L Sbjct: 124 DDLIVSGGRIAGVRLTDGRRIKSAAVVVTTGTFLRGLIHLGEKSWPAGRVDEAPALGLSA 183 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 SF + F GRLKTGTP RLDG TI W E Q D+ PFS +T +IT QI+CGITR Sbjct: 184 SFERIGFALGRLKTGTPPRLDGTTIDWAAVEMQPGDDPPEPFSVLTARITTPQIQCGITR 243 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T TH +I N+ S IYSG I S GPRYCPSIEDK+VRFG+R+GHQ+FLEPEGL+ Sbjct: 244 TTPATHDLIRTNVHRSPIYSGQITSSGPRYCPSIEDKVVRFGDRDGHQVFLEPEGLDDAT 303 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LPEE+Q + TIPGLE V + RPGYAIEYD+++P+EL PTL+T+++ GLF Sbjct: 304 VYPNGISTSLPEEVQLAILATIPGLENVKMTRPGYAIEYDHVDPRELEPTLQTRRMRGLF 363 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEAAAQGLVAG+N+A + D + F R D Y+GVMIDDL ++G+ EPY Sbjct: 364 LAGQINGTTGYEEAAAQGLVAGLNAALAAGGGDPVVFDRADGYLGVMIDDLVTRGITEPY 423 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR++LR DNAD RLT G+ LGC+G R + + SL +T Sbjct: 424 RMFTSRAEYRLTLRADNADQRLTDRGIALGCVGAGRAAYHRAKMAALQAAKQGAMSLSVT 483 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + +S +DG R+A+E LSYP+ + + +I P+ + E L+I++ Y Sbjct: 484 PNEAARHGLSLNRDGHRRSAFELLSYPEIGWREVAAIWPELSAIDPAIAEHLEIDAKYDV 543 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + + + +E L+ + DYS++P LSNE + +L +P + QA +++G+TPA Sbjct: 544 YLKRQAADVEAFRRDEG-LVLTEIDYSAVPGLSNEARNRLEKAQPLTVGQAGRLDGITPA 602 Query: 605 ALNLLLIYIKKN 616 AL +L Y+++ Sbjct: 603 ALGILAAYLRRE 614 >gi|158426333|ref|YP_001527625.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Azorhizobium caulinodans ORS 571] gi|172047933|sp|A8I266|MNMG_AZOC5 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|158333222|dbj|BAF90707.1| glucose-inhibited division protein A subfamily [Azorhizobium caulinodans ORS 571] Length = 625 Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust. Identities = 332/622 (53%), Positives = 448/622 (72%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +++++DV+V+GGGHAGCEAAA AA+LGA TAL+TH+ TIG+MSCNPAIGGLGKGHLVRE Sbjct: 1 MSKAFDVMVVGGGHAGCEAAAAAARLGARTALVTHRADTIGAMSCNPAIGGLGKGHLVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDALDGLMGRVAD GIQFR+LN +KGPAVRGPR QADR+LY AMQ + +Q NL++++ Sbjct: 61 IDALDGLMGRVADQGGIQFRLLNRRKGPAVRGPRAQADRKLYARAMQVALAAQPNLEIVE 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 GE + I+ + + D C VVLTTGTFL G+IH+G+++IPAGR+G++P+ Sbjct: 121 GEADDLLVTEGRITGLALTDGRTFGCGAVVLTTGTFLNGLIHMGEVQIPAGRIGEAPARG 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L + + GRLKTGTP RLDG+TI W E Q D+ PFS +T + N Q+ CG Sbjct: 181 LSGTLARLGLTLGRLKTGTPPRLDGRTIDWASLEMQPGDDDPEPFSALTTALPNPQVSCG 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 ITRT TH +I N+ SA+YSG I+S GPRYCPSIEDK+VRFG+R+GHQIFLEPEGL+ Sbjct: 241 ITRTTQATHDVIRANLSRSAMYSGRIESTGPRYCPSIEDKVVRFGDRDGHQIFLEPEGLD 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 VYPNGIST+LPE++Q + TIPGLE+V + RPGYAIEYD+++P+EL PTLE K+ Sbjct: 301 DPTVYPNGISTSLPEDVQLAVLATIPGLERVVMSRPGYAIEYDHVDPRELEPTLEAKRAP 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLFLAGQINGTTGYEEAAAQGL+AG+N+AR++ + + R + YIGVM+DDL ++GV Sbjct: 361 GLFLAGQINGTTGYEEAAAQGLLAGLNAARRAGGGEGVVIDRAEGYIGVMVDDLVTRGVS 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR++LR DNAD RLT G+ LG +G R F + + + R ++L Sbjct: 421 EPYRMFTSRAEYRLTLRADNADQRLTQRGLDLGLVGTERAAVFGRRMAALDAARERARTL 480 Query: 482 VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +T + ++ +DG+ R+A++ L+YPD +++ L I P+ + +L+I++ Sbjct: 481 NITPNEAAKHGLALNKDGQRRSAFDLLAYPDITLETLAGIWPEFGALEPAIGAQLEIDAK 540 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ + ++ +E ++P + Y LP LSNELK KL+ ++P + QA ++EGM Sbjct: 541 YAVYLDRQAADIATLRRDEDLVLPDELGYDGLPGLSNELKAKLTRVRPRTIGQAGRMEGM 600 Query: 602 TPAALNLLLIYIKKNTVKLNEI 623 TPAAL LL+ Y ++ K +E+ Sbjct: 601 TPAALALLVTYARRTGSKKDEV 622 >gi|126724525|ref|ZP_01740368.1| glucose-inhibited division protein A [Rhodobacterales bacterium HTCC2150] gi|126705689|gb|EBA04779.1| glucose-inhibited division protein A [Rhodobacterales bacterium HTCC2150] Length = 625 Score = 677 bits (1748), Expect = 0.0, Method: Compositional matrix adjust. Identities = 336/613 (54%), Positives = 438/613 (71%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG +AA AA++GA TAL+T +IG MSCNPAIGGLGKGHLVREIDA+ Sbjct: 9 FDVIVIGGGHAGADAAHAAARMGAKTALLTLTKESIGVMSCNPAIGGLGKGHLVREIDAM 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGLMGRVAD AGIQFR+LN +KGPAV+GPR QADR++YR MQ E+ + ENL +I+GEV Sbjct: 69 DGLMGRVADKAGIQFRLLNRRKGPAVQGPRAQADRKIYRKTMQAELAATENLSIIEGEVI 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + + I+ V+ D + I V+LTTGTFLRGVIHIG + P GRMGD PS L Sbjct: 129 DLIQDGDRINGAVLGDGAEIWAKAVILTTGTFLRGVIHIGDVSRPGGRMGDKPSIKLAER 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 F+ GRLKTGTP RLDG+TI WD E Q D+ FSF++ I+ Q+ CGI T Sbjct: 189 LDGFNLPLGRLKTGTPPRLDGRTINWDILETQPGDDDPTLFSFLSRSISAPQVNCGIAHT 248 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N +TH +I EN++ SA+Y G I GPRYCPSIEDKIVRF ++ HQ+FLEPEG + + V Sbjct: 249 NEKTHDLIRENLERSAMYGGHIDGVGPRYCPSIEDKIVRFADKTSHQVFLEPEGADDNTV 308 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YPNGIST+LPE++Q+ ++ ++ GLE I++PGYAIEYDYI+P+ L PTLE + + GL+L Sbjct: 309 YPNGISTSLPEDVQYAYVNSMQGLENAVILQPGYAIEYDYIDPQALRPTLELESVPGLYL 368 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAAAQGLVAG+N+A + + I F R SYIGVMIDDL ++GV EPYR Sbjct: 369 AGQINGTTGYEEAAAQGLVAGLNAAAFALGREPIYFDRAQSYIGVMIDDLVTRGVSEPYR 428 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAE+R+SLR DNAD RLTPIG+ LGC+GE R K F +++ N + L ++LT Sbjct: 429 MFTSRAEFRLSLRADNADQRLTPIGISLGCVGETRTKTFTNKLEKLNLTKFSLSEVILTP 488 Query: 486 KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAY 545 + + K+DG R A+E LS+PD S + LF + P+ S + ++++ ++ Y Y Sbjct: 489 NQIEPLGVKIKKDGVKRNAFELLSFPDISFETLFPVAPEFANIESEIRDQIERDALYHNY 548 Query: 546 TGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAA 605 RQ + + ++ +E IP+DF+Y+ + LSNELK KLS +KP L QA +++GMTPAA Sbjct: 549 IERQAKDVQAMRRDEAHKIPQDFNYAEVSGLSNELKSKLSHVKPRTLGQAGRVDGMTPAA 608 Query: 606 LNLLLIYIKKNTV 618 L LLL I+++ Sbjct: 609 LTLLLTNIRRSAA 621 >gi|240138141|ref|YP_002962613.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA (Glucose-inhibited division protein A) [Methylobacterium extorquens AM1] gi|240008110|gb|ACS39336.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA (Glucose-inhibited division protein A) [Methylobacterium extorquens AM1] Length = 624 Score = 676 bits (1744), Expect = 0.0, Method: Compositional matrix adjust. Identities = 338/599 (56%), Positives = 424/599 (70%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+GGGHAG EAAA AA++GA TAL+TH+ +TIG+MSCNPAIGGLGKGHLVRE+DA Sbjct: 7 SYDVIVVGGGHAGVEAAAAAARVGARTALVTHRAATIGAMSCNPAIGGLGKGHLVREVDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRVADAAGIQFR+LN +KGPAVRGPRTQADR LY AMQ + L VI+GE Sbjct: 67 LDGLMGRVADAAGIQFRLLNRRKGPAVRGPRTQADRALYARAMQAAVAETPELTVIEGEA 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 ++ + + D + + VV+TTGTFLRG+IHIG+ +IPAGR+G+ P+ L Sbjct: 127 DDLTVRSGRVAGVTLTDGRALTAAAVVITTGTFLRGLIHIGERQIPAGRVGEEPAVGLAR 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + + F GRLKTGTP RLDG+TI W E Q AD +PFS +T++IT QI CGITR Sbjct: 187 TLDRHGFRLGRLKTGTPPRLDGRTIDWAALEMQHADAEPVPFSTLTERITTPQIACGITR 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T H +I N+ S +YSG I S GPRYCPSIEDK+VRFG+R GHQIFLEPEGL+ Sbjct: 247 TTQAVHDLIRANLHRSPMYSGGISSRGPRYCPSIEDKVVRFGDREGHQIFLEPEGLDDPT 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGISTALPEE+Q I IPGLE+ I+RPGYAIEYDY++P+EL TL+TK++ GLF Sbjct: 307 VYPNGISTALPEEVQAGIIAAIPGLERTRILRPGYAIEYDYVDPRELDATLQTKRVPGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEAA QGLVAG+N+AR + D F R +SY+GVMIDDL + GV EPY Sbjct: 367 LAGQINGTTGYEEAAGQGLVAGLNAARLAGGSDLAIFDRAESYLGVMIDDLVTHGVSEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSR+EYR+SLR DNAD RLTP G LGC+G R FA + R+ L +L LT Sbjct: 427 RMFTSRSEYRLSLRVDNADERLTPRGAALGCVGSVRAAHFATSQAALSEARARLDTLSLT 486 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + ++ DG R+A+ LSYP+ + L ++ P+ S V ERL+ +++YA Sbjct: 487 PNEAAQHGLALNHDGLRRSAFRILSYPEIGWERLAAVWPELAAVPSRVAERLRTDATYAV 546 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y RQ + + +E +P DY ++ LSNE++ KL ++P L QA++IEG+TP Sbjct: 547 YLNRQQADITAFRRDEAVRLPTSLDYGAIAGLSNEMRVKLDGVRPTTLGQAARIEGVTP 605 >gi|163851010|ref|YP_001639053.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Methylobacterium extorquens PA1] gi|163662615|gb|ABY29982.1| glucose inhibited division protein A [Methylobacterium extorquens PA1] Length = 624 Score = 676 bits (1744), Expect = 0.0, Method: Compositional matrix adjust. Identities = 343/617 (55%), Positives = 437/617 (70%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+GGGHAG EAAA AA++GA TAL+TH+ +TIG+MSCNPAIGGLGKGHLVRE+DA Sbjct: 7 SYDVIVVGGGHAGVEAAAAAARVGARTALVTHRAATIGAMSCNPAIGGLGKGHLVREVDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRVADAAGIQFR+LN +KGPAVRGPRTQADR LY AMQ + L VI+GE Sbjct: 67 LDGLMGRVADAAGIQFRLLNRRKGPAVRGPRTQADRALYARAMQAAVAETPELTVIEGEA 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 ++ +++ D + + VV+TTGTFLRG+IHIG+ +IPAGR+G+ P+ L Sbjct: 127 DDLTVRSGRVAGVMLADGRALTAAAVVITTGTFLRGLIHIGERQIPAGRVGEEPALGLAR 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + + F GRLKTGTP RLDG+TI W E Q AD +PFS +T++IT QI CGITR Sbjct: 187 TLDRHGFRLGRLKTGTPPRLDGRTIDWAALEMQHADAEPVPFSTLTERITTPQIACGITR 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T H +I N+ S +YSG I S GPRYCPSIEDK+VRFG+R GHQIFLEPEGL+ Sbjct: 247 TTQAVHDLIRANLHRSPMYSGGISSRGPRYCPSIEDKVVRFGDREGHQIFLEPEGLDDPT 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGISTALPEE+Q I IPGLE+ I+RPGYAIEYDY++P+EL TL+TK++ GLF Sbjct: 307 VYPNGISTALPEEVQAGIIAAIPGLERTRILRPGYAIEYDYVDPRELDATLQTKRLPGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEAA QGLVAG+N+AR + D F R +SY+GVMIDDL + GV EPY Sbjct: 367 LAGQINGTTGYEEAAGQGLVAGLNAARLAGGSDLAIFDRAESYLGVMIDDLVTHGVSEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSR+EYR+SLR DNAD RLTP G LGC+G R FA + R+ L +L LT Sbjct: 427 RMFTSRSEYRLSLRVDNADERLTPRGAALGCVGSVRAAHFAASQGALSEARARLDTLSLT 486 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + ++ DG R+A++ LSYP+ + L ++ P+ V ERL+ +++YA Sbjct: 487 PNEAAQHGLALNHDGLRRSAFQILSYPEIGWERLAAVWPELAAVPPRVAERLRTDATYAV 546 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + + +E +P DY ++ LSNE++ KL ++P L QA++IEG+TPA Sbjct: 547 YLNRQQADITAFRRDEAVRLPTSLDYGAIAGLSNEMRAKLDGVRPTTLGQAARIEGVTPA 606 Query: 605 ALNLLLIYIKKNTVKLN 621 AL LL + ++ V+++ Sbjct: 607 ALTLLAAHARRGRVQVS 623 >gi|329847387|ref|ZP_08262415.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Asticcacaulis biprosthecum C19] gi|328842450|gb|EGF92019.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Asticcacaulis biprosthecum C19] Length = 622 Score = 674 bits (1740), Expect = 0.0, Method: Compositional matrix adjust. Identities = 320/611 (52%), Positives = 419/611 (68%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAGCEAA +A++GA T L+TH+ T+G MSCNPAIGGLGKGHLVREIDAL Sbjct: 7 WDVIVVGGGHAGCEAATASARMGAKTLLLTHRFDTLGEMSCNPAIGGLGKGHLVREIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DG+MGR+AD AG+QF+VLN KGPAVRGPR Q DR+LYR A+Q E+ ENL +I+G V Sbjct: 67 DGIMGRMADVAGMQFKVLNRSKGPAVRGPRAQIDRKLYRQAVQAELSQTENLTIIEGAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + I+ + R VVLTTGTFLRG+IHIG + PAGR GD P+N L Sbjct: 127 DLILDNGIVCGAIDAAGQNYRAKAVVLTTGTFLRGMIHIGDKRTPAGRWGDQPANGLGQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 D GRLKTGTPARL+GKTI WD+ E+Q D + PFS++T I QI CGIT T Sbjct: 187 LYDLKLDMGRLKTGTPARLEGKTIHWDRLEQQLGDNPITPFSYLTPSIERDQIACGITYT 246 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N ETHRII E ++ SA+Y G I GPRYCPSIEDK+V+F ++ HQIFLEPEG + D V Sbjct: 247 NAETHRIIAERLQESAVYGGHIAGRGPRYCPSIEDKVVKFADKTSHQIFLEPEGYDDDTV 306 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YPNGIST++ E Q F+RTI GLE V + R YAIEYDY++P+EL P+LE K++ GLFL Sbjct: 307 YPNGISTSVSETTQDAFLRTIVGLEDVVVKRYAYAIEYDYVDPRELNPSLELKRLPGLFL 366 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEA AQGL+AG+N+A ++ + R ++YIGVMIDDL ++GV EPYR Sbjct: 367 AGQINGTTGYEEAGAQGLMAGLNAAVRAGGQAPVVLGRDEAYIGVMIDDLITRGVTEPYR 426 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAE+R+SLR DNAD RLT G+ +G +G RRQ + + +R L + Sbjct: 427 MFTSRAEFRLSLRADNADQRLTDKGVAIGVVGARRQTAWTEKRDALAGIRQRAAELNVGP 486 Query: 486 KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAY 545 K + +I DG+ R + ++Y S + L ++ P+ + + E+++I++ YA Y Sbjct: 487 KEALNQAIHVNGDGQRRNVMQLMAYDSCSREKLEALWPEISAWPDALYEQVEIDALYAGY 546 Query: 546 TGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAA 605 GRQ E + + +E +P D DY ++ LS+E +EKL+ ++P L QA +IEG+T A Sbjct: 547 MGRQKAEIETFRKDENLALPADLDYMAIVGLSHEAREKLNRIRPQTLGQAGRIEGITQGA 606 Query: 606 LNLLLIYIKKN 616 L LL Y++ + Sbjct: 607 LTTLLFYVRNH 617 >gi|254467057|ref|ZP_05080468.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rhodobacterales bacterium Y4I] gi|206687965|gb|EDZ48447.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rhodobacterales bacterium Y4I] Length = 624 Score = 674 bits (1738), Expect = 0.0, Method: Compositional matrix adjust. Identities = 323/603 (53%), Positives = 428/603 (70%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M + +YDVIV+GGGHAG EAA AA++G TAL+T + IG MSCNPAIGGLGKGHLVR Sbjct: 1 MKHSAYDVIVVGGGHAGSEAAHAAARMGVRTALVTLNRNGIGVMSCNPAIGGLGKGHLVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDALDG+MGRVAD AGIQFR+LN +KGPAV+GPR Q+DR +YR M R +QENLD++ Sbjct: 61 EIDALDGVMGRVADLAGIQFRLLNRRKGPAVQGPRAQSDRAIYRREMLRLTEAQENLDIV 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 +GEV F + N ++ +++ D S I ++V+LT+GTFLRGVIHIG + P GRMGD PS Sbjct: 121 EGEVTDFLLQGNAVAGVILADGSEIPSNSVILTSGTFLRGVIHIGDVSKPGGRMGDKPSV 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 L F GRLKTGTP RLDG+TI WD E Q DE + FSF+T + +Q+ C Sbjct: 181 KLAERLDSFGLPLGRLKTGTPPRLDGRTINWDILEAQPGDEDPVFFSFLTKAASAKQVSC 240 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 GIT TN +TH II +N+ SA+Y G I+ GPRYCPSIEDKIVRF +++ HQIFLEPEG+ Sbjct: 241 GITHTNAKTHEIIQKNLGRSAMYGGHIEGVGPRYCPSIEDKIVRFADKDSHQIFLEPEGV 300 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 VYPNGIST+LP+++Q ++ +I GLE+ I++PGYAIEYDY++P+ L L K + Sbjct: 301 TDHTVYPNGISTSLPQDVQEDYVHSILGLEQAVILQPGYAIEYDYVDPRALTLELRLKDV 360 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GL+LAGQINGTTGYEEAAAQG+VAG+N+AR S + FSR++SYIGVMIDDLT+ GV Sbjct: 361 PGLYLAGQINGTTGYEEAAAQGMVAGLNAARASLGEGPVSFSRSNSYIGVMIDDLTTNGV 420 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAE+R+SLR DNAD RLTP+ +++GC G++RQ F + S+L++ Sbjct: 421 AEPYRMFTSRAEFRLSLRADNADQRLTPLAIEIGCAGKQRQAAFLEKSDRLGQACSVLEA 480 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 T K +S+ I QDG RT E L++PD +++ + P+ + ++++ ++ Sbjct: 481 KSFTPKQVSAAGIRVNQDGNRRTGMEVLAFPDVEFEDIVPLMPELEGIDPDIRQQVERDA 540 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 YA Y RQ E +K +E +IP + Y + LS EL++KLS+ +P L QA++I+G Sbjct: 541 LYANYIARQEREISAMKRDEGYVIPTGYSYDGIEGLSKELQQKLSLARPETLAQAARIDG 600 Query: 601 MTP 603 MTP Sbjct: 601 MTP 603 >gi|323135829|ref|ZP_08070912.1| glucose inhibited division protein A [Methylocystis sp. ATCC 49242] gi|322398920|gb|EFY01439.1| glucose inhibited division protein A [Methylocystis sp. ATCC 49242] Length = 616 Score = 674 bits (1738), Expect = 0.0, Method: Compositional matrix adjust. Identities = 338/615 (54%), Positives = 428/615 (69%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M + +DVIV+GGGHAGCEAAA +A+LGA TAL+TH ++IG+MSCNPAIGGLGKG LVR Sbjct: 1 MSVKEFDVIVVGGGHAGCEAAAASARLGARTALVTHSRASIGAMSCNPAIGGLGKGQLVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDALDGLMGRVADA GIQFRVLN KGPAVRGPR QADR+LYR AM I +NL V+ Sbjct: 61 EIDALDGLMGRVADAGGIQFRVLNRSKGPAVRGPRAQADRKLYRNAMLAAIEGVDNLTVL 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 +G V E + + IR + VV+TTGTFL GVIHIG + PAGRMGD P+ Sbjct: 121 EGAVEDLLVEGFKVRGVRTASGEDIRAAAVVITTGTFLAGVIHIGDERTPAGRMGDPPAI 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 L + F GRLKTGTP RLDG+TI W++ E Q+ DE PFS +T I NRQI C Sbjct: 181 GLSRRIREAGFAVGRLKTGTPPRLDGRTIRWEELETQWGDESPEPFSSLTTHIANRQIAC 240 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 ITRT H II ++ S + +G I GPRYCPSIEDK+VRF +R+ HQIFLEPEGL Sbjct: 241 AITRTTPTAHEIIRSDLHLSPMRTGAISGPGPRYCPSIEDKVVRFADRDAHQIFLEPEGL 300 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + D VYPNG+ST+LP Q FI IPGLE IIRPGYAIEYDY++P+EL P+LETK++ Sbjct: 301 DDDTVYPNGVSTSLPLATQRAFINAIPGLEDARIIRPGYAIEYDYVDPRELLPSLETKRL 360 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 LFLAGQINGTTGYEEAAAQGLVAG+N+AR + + F R ++Y+GVMIDDL ++GV Sbjct: 361 QRLFLAGQINGTTGYEEAAAQGLVAGLNAARLAAGRGAVIFDRAEAYLGVMIDDLVTRGV 420 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+SLR DNAD RLTP G+ LGC+G R FAK ++ + R+LL+S Sbjct: 421 SEPYRMFTSRAEYRLSLRADNADERLTPKGVGLGCVGALRAATFAKRAEKLSRARALLES 480 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 L LTS + QDG+ R+A+ L++P ++ L I + + +ER++ ++ Sbjct: 481 LSLTSSAALRHGLPVNQDGQRRSAFALLAFPSVTLARLQEIWSELAEIDPSTVERVETDA 540 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y+ Y RQ + + +E+ +P+ DY S+ LS EL+ KL+ L+P + QA +I+G Sbjct: 541 RYSVYLDRQQADIDSFRRDEQLALPESLDYGSIAGLSAELRGKLTYLRPRTIGQAQRIDG 600 Query: 601 MTPAALNLLLIYIKK 615 MTP+AL LL ++ Sbjct: 601 MTPSALTLLAARARR 615 >gi|83950774|ref|ZP_00959507.1| glucose-inhibited division protein A [Roseovarius nubinhibens ISM] gi|83838673|gb|EAP77969.1| glucose-inhibited division protein A [Roseovarius nubinhibens ISM] Length = 621 Score = 671 bits (1732), Expect = 0.0, Method: Compositional matrix adjust. Identities = 337/615 (54%), Positives = 437/615 (71%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +DVIV+GGGHAG +AA AA++GA TAL+T +IG MSCNPAIGGLGKGHLVRE Sbjct: 1 MKHDFDVIVVGGGHAGADAAHAAARMGARTALVTLTFESIGVMSCNPAIGGLGKGHLVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDALDG+MGRVAD AGIQFR+LN +KGPAV+GPR QADR++YR MQRE+ NL +++ Sbjct: 61 IDALDGVMGRVADKAGIQFRLLNRRKGPAVQGPRAQADRKIYREEMQREMRDCPNLTIVE 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 GE A F + + + D S I S VVLTTGTFLRG+IHIG++ P GRMGD PS Sbjct: 121 GEAADFLMSGAEVRGVRLADGSEISASAVVLTTGTFLRGLIHIGQVSRPGGRMGDKPSVK 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L +F GRLKTGTP RLDG TI W E Q D+ FSF++ K++ +QI CG Sbjct: 181 LAERIDQFGLPLGRLKTGTPPRLDGTTIDWSDLEVQPGDDDPTLFSFLSSKVSAQQISCG 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT TN +TH II +NI SA+YSG I+ GPRYCPSIEDKIVRF E++ HQ+FLEPE L+ Sbjct: 241 ITHTNEQTHEIIEKNIGKSAMYSGRIEGVGPRYCPSIEDKIVRFAEKSSHQVFLEPESLS 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 +V+YPNGIST+LPE+IQH ++R+I GLE V I++PGYAIEYDY++ + L L + + Sbjct: 301 DNVIYPNGISTSLPEDIQHDYVRSIKGLENVTILQPGYAIEYDYVDSRALDSRLAVRDVP 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLFLAGQINGTTGYEEAAAQGLVAG+N+A + D I FSR++SYIGVM+DDL ++GV Sbjct: 361 GLFLAGQINGTTGYEEAAAQGLVAGLNAAAVALGRDPITFSRSNSYIGVMVDDLITRGVS 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAE+R+SLR DNAD RLTP+G+++GC+G R++ F + R ++S+ Sbjct: 421 EPYRMFTSRAEFRLSLRADNADQRLTPLGIEVGCVGAERKQAFEAKMSALAEARQDMESV 480 Query: 482 VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 V T K L + + QDGK R YE L+ F L ++ P+ ++L ++ Sbjct: 481 VFTPKELVTAGHAVNQDGKRRNGYELLALQQFDFDALVALRPEWGAIDEASRDQLSKDAM 540 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ + +K +E++ IP DFDY ++ LSNELK KL+ +P N+ QA +I+GM Sbjct: 541 YANYILRQERDVAVLKRDEQQRIPTDFDYMAMEGLSNELKMKLNAARPDNIGQAGRIDGM 600 Query: 602 TPAALNLLLIYIKKN 616 TPAAL LLL ++++ Sbjct: 601 TPAALTLLLAKVRQS 615 >gi|254560703|ref|YP_003067798.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Methylobacterium extorquens DM4] gi|254267981|emb|CAX23849.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA (Glucose-inhibited division protein A) [Methylobacterium extorquens DM4] Length = 624 Score = 671 bits (1730), Expect = 0.0, Method: Compositional matrix adjust. Identities = 338/599 (56%), Positives = 425/599 (70%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+GGGHAG EAAA AA++GA TAL+TH+ +TIG+MSCNPAIGGLGKGHLVRE+DA Sbjct: 7 SYDVIVVGGGHAGVEAAAAAARVGARTALVTHRAATIGAMSCNPAIGGLGKGHLVREVDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRVADAAGIQFR+LN +KGPAVRGPRTQADR LY AMQ + L VI+GE Sbjct: 67 LDGLMGRVADAAGIQFRLLNRRKGPAVRGPRTQADRALYARAMQAAVAETPELTVIEGEA 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 ++ + + D + + VV+TTGTFLRG+IHIG+ +IPAGR+G+ P+ L Sbjct: 127 DDLTVHSGRVAGVTLTDGRALTAAAVVITTGTFLRGLIHIGERQIPAGRVGEGPAVGLAR 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + + F GRLKTGTP RLDG+TI W E Q AD +PFS +T++IT QI CGITR Sbjct: 187 TLDRHGFRLGRLKTGTPPRLDGRTIDWAALEMQHADAEPVPFSTLTERITTPQIACGITR 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T H +I N+ S +YSG I S GPRYCPSIEDK+VRFG+R GHQIFLEPEGL+ Sbjct: 247 TTQAVHDLIRANLHRSPMYSGGISSRGPRYCPSIEDKVVRFGDREGHQIFLEPEGLDDPT 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGISTALPEE+Q I IPGLE+ I+RPGYAIEYDY++P+EL TL+TK++ GLF Sbjct: 307 VYPNGISTALPEEVQAGIIAAIPGLERTRILRPGYAIEYDYVDPRELDATLQTKRLPGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEAA QGLVAG+N+AR + D F R +SY+GVMIDDL + GV EPY Sbjct: 367 LAGQINGTTGYEEAAGQGLVAGLNAARLAGGSDLAIFDRAESYLGVMIDDLVTHGVSEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSR+EYR+SLR DNAD RLTP G LGC+G R FA + R+ L +L LT Sbjct: 427 RMFTSRSEYRLSLRVDNADERLTPRGAALGCVGSIRAAHFAASQAALSEARARLDTLSLT 486 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + ++ DG R+A++ LSYP+ + L ++ P+ S V ERL+ +++YA Sbjct: 487 PNEAAQHGLALNHDGLRRSAFQILSYPEIGWERLAAVWPELAAVPSRVAERLRTDATYAV 546 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y RQ + + +E +P DY ++ LSNE++ KL ++P L QA++IEG+TP Sbjct: 547 YLNRQQADITAFRRDEAVRLPTSLDYGAIAGLSNEMRVKLDGVRPTTLGQAARIEGVTP 605 >gi|298293755|ref|YP_003695694.1| glucose inhibited division protein A [Starkeya novella DSM 506] gi|296930266|gb|ADH91075.1| glucose inhibited division protein A [Starkeya novella DSM 506] Length = 618 Score = 669 bits (1727), Expect = 0.0, Method: Compositional matrix adjust. Identities = 343/599 (57%), Positives = 431/599 (71%), Gaps = 1/599 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 S+DV+VIGGGHAG EAAA AA+LGA TAL+TH +TIG+MSCNPAIGGLGKGHLVRE+DA Sbjct: 7 SFDVVVIGGGHAGTEAAAAAARLGARTALVTHAFATIGAMSCNPAIGGLGKGHLVREVDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRVAD GIQFRVLN +KGPAVRGPR QADR+LY AMQR I SQ NL V++GE Sbjct: 67 LDGLMGRVADQGGIQFRVLNRRKGPAVRGPRAQADRKLYAQAMQRAIDSQPNLSVLEGEA 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + ++ + + D I VV+TTGTFL G+IHIG ++PAGRMG+ P+ L Sbjct: 127 DTLLMQDGRVAGLKLADGRSIGAGAVVITTGTFLNGLIHIGDRQMPAGRMGEQPARGLSG 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S GRLKTGTP RLDG+TI W E Q D PFS +TD ITN Q++CGITR Sbjct: 187 SLTAIGLTLGRLKTGTPPRLDGRTIDWAGLEMQDGDSPPEPFSTLTDAITNPQVKCGITR 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T TH +I NI SA+YSG+I+S GPRYCPSIEDKIVRFGER GHQIFLEPEGL+ Sbjct: 247 TTPATHAVIRANIARSAMYSGNIQSVGPRYCPSIEDKIVRFGEREGHQIFLEPEGLDDPT 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LPE++Q + TIPGLE+V ++RPGYAIEYD+++P+EL PTLET+K GLF Sbjct: 307 VYPNGISTSLPEDVQLALLATIPGLERVAMLRPGYAIEYDHVDPRELEPTLETRKARGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEAAAQGLVAG+N+AR++ ++ F R ++YIGVMIDDL ++GV EPY Sbjct: 367 LAGQINGTTGYEEAAAQGLVAGLNAARRAAGMEGATFDRAEAYIGVMIDDLVTRGVSEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+SLR DNAD RLT G LG IG R+ R+A +R +S+ LT Sbjct: 427 RMFTSRAEYRLSLRADNADQRLTARGDDLGLIGSERRARYAGKSTALARVREWSRSVALT 486 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 ++ +DG+ R+A++ LSYP ++ I P+A + + E+++I++ YA Sbjct: 487 PAEGDRHGLTLNRDGQRRSAFDLLSYPHVGWADICRIWPEASGEDARIGEQVEIDAKYAV 546 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y RQ + + +E +P+ DY SL +SNE+K KL ++P + QAS+I+GMTP Sbjct: 547 YLHRQEADIASFRRDEAAQLPQ-VDYRSLAGISNEIKAKLESIRPRTIGQASRIDGMTP 604 >gi|83953077|ref|ZP_00961799.1| glucose-inhibited division protein A [Sulfitobacter sp. NAS-14.1] gi|83842045|gb|EAP81213.1| glucose-inhibited division protein A [Sulfitobacter sp. NAS-14.1] Length = 620 Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust. Identities = 329/616 (53%), Positives = 433/616 (70%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DVIVIGGGHAG EAA +A++GA+TALIT IG MSCNPAIGGLGKGHLVREID Sbjct: 2 KHFDVIVIGGGHAGAEAAHASARMGANTALITMSRDGIGVMSCNPAIGGLGKGHLVREID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDG+MGRVAD AGIQFR+LN +KGPAV+GPR QADR +YR M E QENL +++GE Sbjct: 62 ALDGVMGRVADKAGIQFRLLNRRKGPAVQGPRAQADRAIYRREMLAETERQENLTIVEGE 121 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V F + +S V+ D I + VVLTTGTFLRGVIHIG + GRMGD S L Sbjct: 122 VTDFILDNGKVSGAVLADGEQISAAAVVLTTGTFLRGVIHIGDVSRSGGRMGDKASVDLA 181 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 N F+ GRLKTGTP RLDG+TI W+K E Q D+ + FSF+++ + QI CGIT Sbjct: 182 NRIDSFNLPLGRLKTGTPPRLDGRTIDWEKLESQPGDDEPVLFSFLSETTSAPQISCGIT 241 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN ETH+II +N+ SA+Y G I GPRYCPSIEDK+VRF ++ HQ+FLEPEG + Sbjct: 242 HTNEETHQIIRDNLSRSAMYGGHIDGVGPRYCPSIEDKVVRFADKTSHQVFLEPEGADDH 301 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LPE++Q ++R++ GLE V II+PGYAIEYDY++P+ L L + + GL Sbjct: 302 TIYPNGISTSLPEDVQLAYVRSMVGLENVEIIQPGYAIEYDYVDPRALDLALSVRTVPGL 361 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 +LAGQINGTTGYEEAAAQGLVAG+N+A + + + FSR DSYIGVMIDDLT++GV EP Sbjct: 362 YLAGQINGTTGYEEAAAQGLVAGLNAALSAQGKEPVTFSRADSYIGVMIDDLTTRGVTEP 421 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R+SLR DNAD RLTP+ + LGC+ + R F+ + + + + L + Sbjct: 422 YRMFTSRAEFRLSLRADNADQRLTPLAIALGCVSQERVAHFSAKMAKIDAAMAELTNTPY 481 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 SK + + I QDG RT ++ L++PD + + + I P + +++ ++ YA Sbjct: 482 ASKAIEAAGIKVSQDGTKRTGFQLLAFPDVTFEQIVLINPALDAVEPEIRRQVERDALYA 541 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y RQ + ++ +E +IP FDY ++ LSNEL KLS+++P NL QA++I+GMTP Sbjct: 542 NYIARQQRDIDLLQKDEAHVIPASFDYEAIDGLSNELTSKLSLIRPTNLAQAARIDGMTP 601 Query: 604 AALNLLLIYIKKNTVK 619 +AL LLL ++K+ + K Sbjct: 602 SALTLLLSHLKRGSQK 617 >gi|188580910|ref|YP_001924355.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Methylobacterium populi BJ001] gi|205831532|sp|B1ZGG2|MNMG_METPB RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|179344408|gb|ACB79820.1| glucose inhibited division protein A [Methylobacterium populi BJ001] Length = 624 Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust. Identities = 338/598 (56%), Positives = 422/598 (70%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAG EAAA AA++GA TAL+TH+ TIG+MSCNPAIGGLGKGHLVRE+DAL Sbjct: 8 YDVIVVGGGHAGVEAAAAAARVGARTALVTHRAETIGTMSCNPAIGGLGKGHLVREVDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGLM RVADAAGIQFR+LN +KGPAVRGPRTQADR LY AMQ + L VI+GE Sbjct: 68 DGLMARVADAAGIQFRLLNRRKGPAVRGPRTQADRALYARAMQAAVAETPGLTVIEGEAD 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E ++ ++ D + VV+TTGTFLRG+IHIG+ +IPAGR+G+ P+ L + Sbjct: 128 DLIVEAGRVAGAMLADGRRLAAGAVVITTGTFLRGLIHIGERQIPAGRVGEEPALGLART 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + F GRLKTGTP RLDG+TI W E Q AD +PFS +T++IT QI CGITRT Sbjct: 188 LDRHGFRLGRLKTGTPPRLDGRTIDWTALEMQHADADPVPFSTLTERITTPQIACGITRT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 H +I EN+ S +YSG I S GPRYCPSIEDK+VRFG+R GHQIFLEPEGL+ V Sbjct: 248 TQRVHDLIRENLHRSPMYSGGISSRGPRYCPSIEDKVVRFGDREGHQIFLEPEGLDDPTV 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YPNGISTALPE +Q I IPGLE+ I+RPGYAIEYDY++P+EL TL+TK++ GLFL Sbjct: 308 YPNGISTALPEVVQAGIIAAIPGLERTRILRPGYAIEYDYVDPRELDATLQTKRLPGLFL 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAA QGLVAG+N+AR + + F R +SY+GVMIDDL + GV EPYR Sbjct: 368 AGQINGTTGYEEAAGQGLVAGLNAARLAGASELAVFDRAESYLGVMIDDLVTHGVSEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSR+EYR+SLR DNAD RLTP G LGC+G R FA + R+ L +L LT Sbjct: 428 MFTSRSEYRLSLRVDNADERLTPRGAALGCVGSIRAAHFAASQGALSEARTRLDTLSLTP 487 Query: 486 KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAY 545 ++ ++ +DG RTA++ LSYP+ L +I PD + ERLQ +++YA Y Sbjct: 488 NEAAAHGLALNRDGLRRTAFQLLSYPEIGWDRLAAIWPDLAAVPPRIAERLQTDATYAVY 547 Query: 546 TGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 RQ + + +E +P DY ++ LSNE++ KL ++P L QA++IEG+TP Sbjct: 548 LDRQQADITAFRRDEAVRLPASLDYGTIAGLSNEMRVKLDGVRPTTLGQAARIEGVTP 605 >gi|163745110|ref|ZP_02152470.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Oceanibulbus indolifex HEL-45] gi|161381928|gb|EDQ06337.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Oceanibulbus indolifex HEL-45] Length = 620 Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust. Identities = 336/619 (54%), Positives = 436/619 (70%), Gaps = 6/619 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DVIVIGGGHAG EAA +A++GA TAL+T IG MSCNPAIGGLGKGHLVREID Sbjct: 2 KHFDVIVIGGGHAGAEAAHASARMGAQTALVTMSRDGIGVMSCNPAIGGLGKGHLVREID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 A+DG+MGRVAD AGIQFR+LN +KGPAV+GPR QADR++YR M RE Q+NL +++GE Sbjct: 62 AMDGVMGRVADKAGIQFRLLNRRKGPAVQGPRAQADRKIYRTEMLRETEGQDNLQIVEGE 121 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V F + +S +++ D + + ++VVLTTGTFLRGVIHIG GRMGD S L Sbjct: 122 VVDFLMDGPAVSGVLLADGTTLNAASVVLTTGTFLRGVIHIGDESHQGGRMGDRASVKLA 181 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 F GRLKTGTP RLDG+TI WD E Q D+ + FSF++D+I+ Q+ CGIT Sbjct: 182 ERIDSFGLPMGRLKTGTPPRLDGRTINWDILEGQPGDDEPVLFSFLSDEISAPQVACGIT 241 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH+II EN+ SA+Y G I GPRYCPSIEDK+VRF ++ HQ+FLEPEG++ Sbjct: 242 HTNEATHKIIRENLGRSAMYGGHIDGVGPRYCPSIEDKVVRFADKESHQVFLEPEGVDDH 301 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNGIST+LP ++Q ++R++ GLE I++PGYAIEYDYI+P+ L TL + + GL Sbjct: 302 TVYPNGISTSLPADVQEAYVRSMVGLENAVILQPGYAIEYDYIDPRALSSTLGVRTVGGL 361 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 FLAGQINGTTGYEEAAAQGLVAG+N+A + + + FSR+DSYIGVMIDDLT++GV EP Sbjct: 362 FLAGQINGTTGYEEAAAQGLVAGLNAALSAQGKEPVIFSRSDSYIGVMIDDLTTRGVTEP 421 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R+SLR DNAD RLTP+ ++LGC R + F + + ++ L S + Sbjct: 422 YRMFTSRAEFRLSLRADNADQRLTPLAIELGCASGERIETFQRKLNALTLVKEQLSSELY 481 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIE-RLQIESS- 541 T K L + +S QDG RT ++ L++PD S ++L + P + + IE R Q+E Sbjct: 482 TPKELQAAGLSVNQDGSKRTGFQVLAFPDISFEDLIPLDP---RLTDTPIEVRRQVERDA 538 Query: 542 -YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 YA Y RQ E +K +E IP DFD++SL LSNELK K+S +P + QA++I+G Sbjct: 539 LYATYIERQKKEIDLLKKDEGLRIPGDFDFASLSGLSNELKTKISAARPETMAQAARIDG 598 Query: 601 MTPAALNLLLIYIKKNTVK 619 MTPAAL L+L +K+ K Sbjct: 599 MTPAALTLILARVKRGAGK 617 >gi|254453530|ref|ZP_05066967.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Octadecabacter antarcticus 238] gi|198267936|gb|EDY92206.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Octadecabacter antarcticus 238] Length = 622 Score = 668 bits (1723), Expect = 0.0, Method: Compositional matrix adjust. Identities = 328/614 (53%), Positives = 422/614 (68%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +YDVI+IGGGHAGCEAA +A+ G T LIT + + +G MSCNPAIGGLGKGHLVRE Sbjct: 1 MKHTYDVIIIGGGHAGCEAAHASARSGVRTLLITLRLTDLGVMSCNPAIGGLGKGHLVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDALDG+MGR AD AGIQFR+LN +KGPAV+GPRTQADR LYR A+Q ++ NLD+ + Sbjct: 61 IDALDGIMGRAADRAGIQFRLLNRRKGPAVQGPRTQADRALYRNAVQELTAARSNLDLRE 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 GEV E ++ +V++D S I +TVVLT+GTFLRGVIHIG + GRMGD PS + Sbjct: 121 GEVVDLTLENGRVTGVVLKDGSKISATTVVLTSGTFLRGVIHIGDVAKAGGRMGDLPSIA 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L +D GRLKTGTP RLDG+TI WD E+Q AD FSFM +QI CG Sbjct: 181 LAERLSSYDLPLGRLKTGTPPRLDGRTINWDGLERQDADVDPELFSFMHRTTFAKQIACG 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT TN ETH II +N+ SA+Y G I GPRYCPSIEDK+VRF ++ HQIFLEPE L Sbjct: 241 ITHTNSETHEIIAKNLDRSAMYGGHIDGVGPRYCPSIEDKVVRFADKKSHQIFLEPESLT 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 +YPNGIST+LP ++Q Q++ +I GLE I++PGYAIEYDYI+P+ L LE K++ Sbjct: 301 DYTIYPNGISTSLPVDVQEQYVHSIVGLENAKILQPGYAIEYDYIDPRSLSTQLELKRMP 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLFLAGQINGTTGYEEAAAQG+VAG+N+A + D + F R+ SYIGVMIDDLT +GV Sbjct: 361 GLFLAGQINGTTGYEEAAAQGIVAGLNAAACAGNCDPVLFDRSTSYIGVMIDDLTVRGVS 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAE+R+SLR DNAD RLT G +GC+ + R ++K E + R L + Sbjct: 421 EPYRMFTSRAEFRLSLRADNADQRLTSFGRSVGCVEDARWMVYSKKKIELDRGREELSGI 480 Query: 482 VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +S+ L+ + DG RT + L+ ++ +L +I P + + +L+ ++ Sbjct: 481 TASSRALNDVGVKVSVDGPKRTLADALTIAGTTVNDLAAIAPQLSEIPKDIASQLERDAL 540 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y+ Y RQM + + +K + +LIP + Y S+ LSNELK KL P NL QA++I+G+ Sbjct: 541 YSHYVERQMRDIEGMKRDSGKLIPHNMSYDSIAGLSNELKSKLKTALPDNLSQAARIDGI 600 Query: 602 TPAALNLLLIYIKK 615 TPAAL L+ IKK Sbjct: 601 TPAALMLVAAEIKK 614 >gi|91762517|ref|ZP_01264482.1| glucose inhibited division protein A [Candidatus Pelagibacter ubique HTCC1002] gi|91718319|gb|EAS84969.1| glucose inhibited division protein A [Candidatus Pelagibacter ubique HTCC1002] Length = 623 Score = 668 bits (1723), Expect = 0.0, Method: Compositional matrix adjust. Identities = 330/616 (53%), Positives = 433/616 (70%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 S++V+VIGGGHAGCEAAA +A+LG +TAL THK TIG MSCNPAIGGLGKGHLVREIDA Sbjct: 6 SFEVVVIGGGHAGCEAAAASARLGINTALFTHKIETIGEMSCNPAIGGLGKGHLVREIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDG+MG VAD +GIQFR+LN +GPAV+GPRTQ+DR LYR MQ ++L+ NL + V Sbjct: 66 LDGVMGEVADKSGIQFRLLNRSRGPAVQGPRTQSDRSLYRKYMQEKLLNYCNLSIFSDPV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 F KN IS + I CS ++LTTGTFL G+IHIG + PAGR + PS L Sbjct: 126 IRFIFNKNTISGFKTKSGKKILCSKLILTTGTFLNGLIHIGDERTPAGRFNEKPSTGLSE 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 K+DF GRLKTGTP RLD +TI +D E+QFADE FSF+T K N+Q+ C +T Sbjct: 186 QLEKYDFKIGRLKTGTPPRLDTRTIKYDNLEEQFADEDPYFFSFLTKKNLNKQVSCRMTY 245 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN + H+II +N+K SA+YSG I+ GPRYCPSIEDKIV+F +++ HQI+LEPEGLN Sbjct: 246 TNEKVHKIIQKNLKRSAMYSGSIQGVGPRYCPSIEDKIVKFADKDRHQIYLEPEGLNDHT 305 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LPE++Q + I GLE V IIRPGYAIEYDYI+P+ELF TLETKKI L+ Sbjct: 306 IYPNGISTSLPEDVQQEICNNINGLENVKIIRPGYAIEYDYIDPRELFLTLETKKIQNLY 365 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEAAAQGL+AGIN+A K + R+D+YIGVMIDDL +KGV EPY Sbjct: 366 LAGQINGTTGYEEAAAQGLIAGINAALSFKKQEPFILDRSDAYIGVMIDDLVTKGVAEPY 425 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+SLR DNAD RLT G+++G I + R+ F ++ + ++ +++ Sbjct: 426 RMFTSRAEYRLSLRADNADQRLTNKGIEIGLISKEREDIFKDKEKKLGIISKIMGESLIS 485 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + S +I +DG R + E L+ +++ + I P+ F + E+++I + Y Sbjct: 486 PTKIKSFNIKIAKDGILRKSNEILTQKGVNMKKIREIWPEIPYFDKKIDEQIEINAHYRG 545 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y +Q + K +E +IP++ +Y L LSNE+K K +KP + QA +I+G+TPA Sbjct: 546 YLKKQKADILAFKRDENLVIPENLNYDDLSGLSNEVKSKFEQIKPQTMGQALRIDGITPA 605 Query: 605 ALNLLLIYIKKNTVKL 620 A+ +LL Y+K+ ++KL Sbjct: 606 AVYILLSYVKRKSIKL 621 >gi|126730103|ref|ZP_01745915.1| glucose-inhibited division protein A [Sagittula stellata E-37] gi|126709483|gb|EBA08537.1| glucose-inhibited division protein A [Sagittula stellata E-37] Length = 625 Score = 667 bits (1720), Expect = 0.0, Method: Compositional matrix adjust. Identities = 332/615 (53%), Positives = 435/615 (70%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DV+V+G GHAG +AAA +A++GA TAL+T K S +G MSCNPAIGGLGKGHLVREIDA Sbjct: 8 TFDVVVVGAGHAGADAAAASARMGAKTALVTLKKSDLGVMSCNPAIGGLGKGHLVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRVAD AGIQFR+LN +KGPAV+GPR QADR+LY MQ E+ + ENL++++ EV Sbjct: 68 LDGLMGRVADYAGIQFRLLNRRKGPAVQGPRAQADRKLYAFKMQEELTAIENLEIVEAEV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 F E ++ +V++D I +VVLT+GTFLRG+IHIG P GR+GD P+ L Sbjct: 128 VDFTIENGRVAGVVLRDGQRISSGSVVLTSGTFLRGIIHIGDRSYPGGRVGDDPAVRLAE 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + GRLKTGTP RL+GKTI WD E+Q D+ + FSF++ RQI CGIT Sbjct: 188 RIEELKLPLGRLKTGTPPRLNGKTISWDALEQQPGDDDPVLFSFLSKAPLARQISCGITH 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II +N+ SA+Y G I+ GPRYCPSIEDK+VRF E+ HQ+FLEPEGL+TD Sbjct: 248 TNARTHDIIRQNLSRSAMYGGHIEGTGPRYCPSIEDKVVRFAEKESHQVFLEPEGLDTDT 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LP ++Q ++R+I GLEKV I++PGYAIEYD+++P L TL K + GL+ Sbjct: 308 VYPNGISTSLPADVQEDYVRSITGLEKVEILQPGYAIEYDFVDPTSLDSTLRVKDLEGLY 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEAAAQGLVAG+N+A + D I FSRTDSYIGVMIDDLT++ V EPY Sbjct: 368 LAGQINGTTGYEEAAAQGLVAGLNAAAFALGRDRINFSRTDSYIGVMIDDLTTRSVTEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAE+R+SLR DNAD RLTP + LG E R F + ++ + R LL+ T Sbjct: 428 RMFTSRAEFRLSLRADNADQRLTPKAIDLGIASESRIGSFTRKMEALSSGRQLLEETTFT 487 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + + I QDG R+ ++ LS+ D ++ +L + P + +++ E+ YA Sbjct: 488 PSQVKTLGIVVNQDGARRSGFQLLSFKDVTLGHLSQLEPAFLEIDEETGAQIEKEALYAN 547 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + ++ +E IP DFD+ SLP+LSNEL++KL ++P ++ QAS+IEGMTPA Sbjct: 548 YLDRQAKDVDTLRRDEAVRIPLDFDFGSLPSLSNELRKKLEDVRPESIAQASRIEGMTPA 607 Query: 605 ALNLLLIYIKKNTVK 619 AL L+L +++ K Sbjct: 608 ALMLILAKLRQGERK 622 >gi|170739705|ref|YP_001768360.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Methylobacterium sp. 4-46] gi|205831535|sp|B0UJI8|MNMG_METS4 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|168193979|gb|ACA15926.1| glucose inhibited division protein A [Methylobacterium sp. 4-46] Length = 627 Score = 667 bits (1720), Expect = 0.0, Method: Compositional matrix adjust. Identities = 337/603 (55%), Positives = 439/603 (72%), Gaps = 1/603 (0%) Query: 2 INRS-YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 I+R+ +DVIV+GGGHAG EAAA AA+LGA+TAL+TH+ +T+G+MSCNPAIGGLGKGHLVR Sbjct: 4 IDRTRFDVIVVGGGHAGVEAAAAAARLGAATALVTHRRATLGAMSCNPAIGGLGKGHLVR 63 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DALDGLMGRVAD AGIQFR+LN +KGPAVRGPR+QADR+LY AMQ + + NL +I Sbjct: 64 EVDALDGLMGRVADRAGIQFRLLNRRKGPAVRGPRSQADRKLYARAMQEALAATPNLSLI 123 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 +GE + ++ IV+ D + C+ VVLTTGTFLRG+IHIG+ +PAGR+G++P+ Sbjct: 124 EGEAHDLAVVEGRVTGIVLADGRALPCAAVVLTTGTFLRGLIHIGERTMPAGRVGEAPAL 183 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 L + + F GRLKTGTPARLDG+TI W EKQ AD+ +PFS +TD+IT QIEC Sbjct: 184 GLAATLDRHGFGLGRLKTGTPARLDGRTIDWAGIEKQAADDEPVPFSSLTDRITTPQIEC 243 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 G+TRT H +I N+ S +YSG I S GPRYCPSIEDK+VRFG+R+GHQIFLEPEGL Sbjct: 244 GVTRTTQAVHDLIRANLHRSPMYSGGITSRGPRYCPSIEDKVVRFGDRDGHQIFLEPEGL 303 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + +YPNGISTALPEE+Q +R IPG E+ ++RPGYAIEYDY++P+EL PTL+T+++ Sbjct: 304 DDPTIYPNGISTALPEEVQRAVLRLIPGCERAAMLRPGYAIEYDYVDPRELDPTLQTRRV 363 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 +GLFLAGQINGTTGYEEAA QG++AGIN+AR + R +SYIGVMIDDL + GV Sbjct: 364 AGLFLAGQINGTTGYEEAAGQGILAGINAARLAAGSALAVLDRAESYIGVMIDDLVTHGV 423 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSR+EYR+SLR DNAD RLT G+ LGC+G R + FA+ Q R+ L + Sbjct: 424 SEPYRMFTSRSEYRLSLRVDNADERLTGRGIALGCVGAARARHFAESQQALAAARARLDA 483 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 L +T + ++ +DG R+A++ LSYP+ L +I P+ V ERL+ ++ Sbjct: 484 LAITPSEAARHGLALNRDGIRRSAFQLLSYPEIDWPRLAAIWPELAAVPPRVAERLRTDA 543 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 +YA Y RQ + + +E +P DY + LSNEL+ KL ++P L QA++IEG Sbjct: 544 AYAVYLDRQRSDIAAFRRDEAVRLPASLDYGRIAGLSNELRLKLDCVRPHTLGQAARIEG 603 Query: 601 MTP 603 +TP Sbjct: 604 VTP 606 >gi|218529837|ref|YP_002420653.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Methylobacterium chloromethanicum CM4] gi|218522140|gb|ACK82725.1| glucose inhibited division protein A [Methylobacterium chloromethanicum CM4] Length = 624 Score = 666 bits (1719), Expect = 0.0, Method: Compositional matrix adjust. Identities = 336/599 (56%), Positives = 424/599 (70%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVI++GGGHAG EAAA AA++GA TAL+TH+ +TIG+MSCNPAIGGLGKGHLVRE+DA Sbjct: 7 SYDVIIVGGGHAGVEAAAAAARVGARTALVTHRAATIGAMSCNPAIGGLGKGHLVREVDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRVADAAGIQFR+LN +KGPAVRGPRTQADR LY AMQ + L VI+GE Sbjct: 67 LDGLMGRVADAAGIQFRLLNRRKGPAVRGPRTQADRALYARAMQAAVAETPELTVIEGEA 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 ++ +++ D + + VV+TTGTFLRG+IHIG+ +IPAGR+G+ P+ L Sbjct: 127 DDLTVHSGRVAGVMLTDGRALTAAAVVITTGTFLRGLIHIGERQIPAGRVGEEPAVGLAR 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + + F GRLKTGTP RLDG+TI W E Q AD +PFS +T++IT QI CGITR Sbjct: 187 TLDRHGFRLGRLKTGTPPRLDGRTIDWAALEMQHADAEPVPFSTLTERITTPQIACGITR 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T H +I N+ S +YSG I S GPRYCPSIEDK+VRFG+R GHQIFLEPEGLN Sbjct: 247 TTQAVHDLIRANLHRSPMYSGGISSRGPRYCPSIEDKVVRFGDREGHQIFLEPEGLNDPT 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGISTALPEE+Q I IPGLE+ I+ PGYAIEYDY++P+EL TL+TK++ GLF Sbjct: 307 VYPNGISTALPEEVQAGIIAAIPGLERTRILCPGYAIEYDYVDPRELDATLQTKRLPGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEAA QGLVAG+N+AR + D F R +SY+GVMIDDL + GV EPY Sbjct: 367 LAGQINGTTGYEEAAGQGLVAGLNAARLAGGSDLAIFDRAESYLGVMIDDLVTHGVSEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSR+EYR+SLR DNAD RLTP G LGC+G R FA + R+ L +L LT Sbjct: 427 RMFTSRSEYRLSLRVDNADERLTPRGAALGCVGSVRAAHFAASQAALSEARARLDTLSLT 486 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + ++ DG R+A++ LSYP+ + L ++ P+ V ERL+ +++YA Sbjct: 487 PNEAAQHGLALNHDGLRRSAFQILSYPEIGWERLAAVWPELAAVPPRVAERLRTDATYAV 546 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y RQ + + +E +P DY ++ LSNE++ KL ++P L QA++IEG+TP Sbjct: 547 YLNRQQADITAFRRDEAVRLPTSLDYGAIAGLSNEMRAKLDGVRPTTLGQAARIEGVTP 605 >gi|114762197|ref|ZP_01441665.1| glucose-inhibited division protein A [Pelagibaca bermudensis HTCC2601] gi|114545221|gb|EAU48224.1| glucose-inhibited division protein A [Roseovarius sp. HTCC2601] Length = 622 Score = 665 bits (1717), Expect = 0.0, Method: Compositional matrix adjust. Identities = 313/580 (53%), Positives = 415/580 (71%) Query: 26 KLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNV 85 ++GA TAL+T + IG MSCNPAIGGLGKGHLVREIDALDG+MGRVAD AGIQ+R+LN Sbjct: 26 RMGARTALVTLTEAGIGVMSCNPAIGGLGKGHLVREIDALDGVMGRVADQAGIQYRLLNR 85 Query: 86 KKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMI 145 +KGPAV+GPR QADR+LYR AM RE+ + NL ++QGEV + + +++ D S + Sbjct: 86 RKGPAVQGPRAQADRKLYREAMLREMKATPNLTIVQGEVVDLMMSGDTVEGVILDDGSEL 145 Query: 146 RCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLD 205 RC +VVLTTGTFLRGVIHIG P GRMGD PS L F + GRLKTGTP RLD Sbjct: 146 RCGSVVLTTGTFLRGVIHIGDKSRPGGRMGDRPSVRLAERIDHFGLELGRLKTGTPPRLD 205 Query: 206 GKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSG 265 G+TI W + E+Q DE + FSF++ RQI CGIT TN TH II +N+ SA+Y G Sbjct: 206 GRTIDWSQLEEQPGDEEPVLFSFLSQAPAARQISCGITHTNERTHEIIRDNLDRSAMYGG 265 Query: 266 DIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRT 325 I+ GPRYCPSIEDK+VRF ++ HQIFLEPEGL+ +YPNGIST+LPEE+Q ++R+ Sbjct: 266 HIEGVGPRYCPSIEDKVVRFADKTSHQIFLEPEGLDDHTIYPNGISTSLPEEVQLDYVRS 325 Query: 326 IPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVA 385 I GLE I++PGYAIEYD+++P+ L L + + GLFLAGQINGTTGYEEAAAQGLVA Sbjct: 326 IFGLEHAEILQPGYAIEYDFVDPRSLDLRLAVRNVGGLFLAGQINGTTGYEEAAAQGLVA 385 Query: 386 GINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNR 445 G+N+A + + F R++SYIGVMIDDLTS+GV EPYRMFTSRAE+R+SLR DNAD R Sbjct: 386 GVNAAMDALGQGSVHFGRSESYIGVMIDDLTSRGVSEPYRMFTSRAEFRLSLRADNADQR 445 Query: 446 LTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAY 505 LTP ++LGCI E R+ F++ +++ + R LL+S K+L + I DG+ R + Sbjct: 446 LTPRAIELGCISEERRAAFSEKLEKLSSGRELLESRQFAPKDLGTMGIQVSPDGQKRNGF 505 Query: 506 EFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIP 565 + L++PD +++ L + P + + ++L+ ++ YA Y RQ + ++ +E IP Sbjct: 506 QLLAFPDVTMKTLVAGEPAFEGMDAEIAQQLERDALYANYIARQQKDVDALRRDEAMTIP 565 Query: 566 KDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAA 605 + F+++++ LSNELK KLS+ +P NL QA+K++GMTPAA Sbjct: 566 RAFEFAAVEGLSNELKHKLSLARPENLAQAAKVDGMTPAA 605 >gi|254488415|ref|ZP_05101620.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Roseobacter sp. GAI101] gi|214045284|gb|EEB85922.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Roseobacter sp. GAI101] Length = 623 Score = 665 bits (1716), Expect = 0.0, Method: Compositional matrix adjust. Identities = 332/616 (53%), Positives = 433/616 (70%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DVIVIGGGHAG EAA AA++G +TAL+T IG MSCNPAIGGLGKGHLVREID Sbjct: 5 KHFDVIVIGGGHAGAEAAHAAARMGVATALVTMSRDGIGVMSCNPAIGGLGKGHLVREID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 A+DG+MGRVAD AGIQFR+LN +KGPAV+GPRTQADR++YR M E QENL +I+GE Sbjct: 65 AMDGVMGRVADKAGIQFRLLNRRKGPAVQGPRTQADRKIYRTEMLLETERQENLTIIEGE 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V F + +S +V+ D S + V+LTTGTFLRGVIHIG + GRMGD S L Sbjct: 125 VVDFMMQGEAVSGVVLADQSEVFAKAVILTTGTFLRGVIHIGDVSRSGGRMGDKASVKLA 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 F+ GRLKTGTP RLDG+TI W K E Q DE FSF++ T +QI CGIT Sbjct: 185 ERIDSFNLPLGRLKTGTPPRLDGRTIDWAKLESQPGDEEPTLFSFLSTAPTAKQISCGIT 244 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH II EN+ SA+Y G I+ GPRYCPSIEDK+VRF ++ HQ+FLEPEG++ Sbjct: 245 HTNEKTHDIIRENLSRSAMYGGHIEGVGPRYCPSIEDKVVRFSDKTSHQVFLEPEGVDDH 304 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LPE++Q ++R++ GLE V I++PGYAIEYDY++P+ L TL+ + + GL Sbjct: 305 TIYPNGISTSLPEDVQLAYVRSMEGLENVEILQPGYAIEYDYVDPRALDLTLKVRSVPGL 364 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 +LAGQINGTTGYEEAA QGLVAG+N+A S D + FSR+ SYIGVMIDDLT++GV EP Sbjct: 365 YLAGQINGTTGYEEAAGQGLVAGLNAALASQGKDPVIFSRSQSYIGVMIDDLTTRGVTEP 424 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R+SLR DNAD RLTP+ ++LGC R + F++ ++ LL+S Sbjct: 425 YRMFTSRAEFRLSLRADNADQRLTPLAIELGCTTTTRAEVFSEKMKRLKEATDLLQSDKF 484 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 + K + + I QDG RT ++ LS+PD ++L + P +++ ++ YA Sbjct: 485 SPKVIEESGIKINQDGSKRTGFQLLSFPDVKFEDLIPLDPRLEAVDEETRRQVERDALYA 544 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y RQ + ++ +E LIP FDY+ + LSNELK KL ++P NL QA++I+GMTP Sbjct: 545 NYIARQQRDIDVLQKDEAHLIPDGFDYAPIDGLSNELKSKLIRVRPTNLAQAARIDGMTP 604 Query: 604 AALNLLLIYIKKNTVK 619 +AL LLL ++K++ K Sbjct: 605 SALTLLLSHLKRDARK 620 >gi|71083057|ref|YP_265776.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Candidatus Pelagibacter ubique HTCC1062] gi|81170565|sp|Q4FNR6|MNMG_PELUB RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|71062170|gb|AAZ21173.1| glucose inhibited division protein A [Candidatus Pelagibacter ubique HTCC1062] Length = 623 Score = 665 bits (1715), Expect = 0.0, Method: Compositional matrix adjust. Identities = 329/616 (53%), Positives = 432/616 (70%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 S++V+VIGGGHAGCEAAA +A+LG +TAL THK TIG MSCNPAIGGLGKGHLVRE+DA Sbjct: 6 SFEVVVIGGGHAGCEAAAASARLGINTALFTHKIETIGEMSCNPAIGGLGKGHLVRELDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDG+MG VAD +GIQFR+LN +GPAV+GPRTQ+DR LYR MQ ++L+ NL V V Sbjct: 66 LDGVMGDVADKSGIQFRLLNRSRGPAVQGPRTQSDRSLYRKYMQEKLLNYCNLSVFSDPV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 F KN IS I C ++LTTGTFL G+IHIG + PAGR + PS L Sbjct: 126 IKFIFNKNTISGFETNSGKKILCGKLILTTGTFLNGLIHIGDERTPAGRFNEKPSTGLSE 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 K+DF GRLKTGTP RLD +TI +D E+QFADE FSF+T K N+QI C +T Sbjct: 186 QLEKYDFKIGRLKTGTPPRLDARTIKYDNLEEQFADEDPYFFSFLTKKNLNKQISCRMTY 245 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN + H+II +N+K SA+YSG I+ GPRYCPSIEDKIV+F +++ HQI+LEPEGLN Sbjct: 246 TNEKVHKIIQKNLKRSAMYSGSIQGVGPRYCPSIEDKIVKFADKDRHQIYLEPEGLNDHT 305 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LPE++Q + I GLE V IIRPGYAIEYDYI+P+ELF TLETKKI L+ Sbjct: 306 IYPNGISTSLPEDVQQEICNNISGLENVKIIRPGYAIEYDYIDPRELFLTLETKKIQNLY 365 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEAAAQGL+AGIN+A K + R+D+YIGVMIDDL +KGV EPY Sbjct: 366 LAGQINGTTGYEEAAAQGLIAGINAALSFKKQEPFILDRSDAYIGVMIDDLVTKGVAEPY 425 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+SLR DNAD RLT G+++G I + R+ F ++ + ++ +++ Sbjct: 426 RMFTSRAEYRLSLRADNADQRLTNKGIEIGLISKEREDIFKDKEKKLGIISKIMGESLIS 485 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + S +I +DG R + E L+ +++ + I P+ F + E+++I + Y Sbjct: 486 PTKIKSFNIKIAKDGILRKSNEILTQKGVNMKKIREIWPEIPYFDKKIDEQIEINAHYRG 545 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y +Q + K +E +IP++ +Y L LSNE+K K + +KP + QA +I+G+TPA Sbjct: 546 YLKKQKADILAFKRDENLVIPENVNYDDLSGLSNEVKAKFNQIKPKTMGQALRIDGITPA 605 Query: 605 ALNLLLIYIKKNTVKL 620 A+ +LL ++K+ ++KL Sbjct: 606 AVYILLSHVKRKSIKL 621 >gi|84514917|ref|ZP_01002280.1| glucose-inhibited division protein A [Loktanella vestfoldensis SKA53] gi|84511076|gb|EAQ07530.1| glucose-inhibited division protein A [Loktanella vestfoldensis SKA53] Length = 623 Score = 664 bits (1713), Expect = 0.0, Method: Compositional matrix adjust. Identities = 323/618 (52%), Positives = 426/618 (68%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M + YDVIVIGGGHAG EAA AA++GA T L+T +IG MSCNPAIGGLGKGHLVR Sbjct: 1 MKHYDYDVIVIGGGHAGSEAAHAAARMGARTVLVTLTRRSIGVMSCNPAIGGLGKGHLVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDALDG MG+VAD AGIQFR+LN KKGPAV+GPR Q DR +YR MQ + +Q NL ++ Sbjct: 61 EIDALDGAMGQVADRAGIQFRLLNRKKGPAVQGPRAQTDRAIYRDTMQAVLAAQPNLTIL 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 +GE + + ++ I ++D M+ V+LTTGTFLRGVIHIG++ P GRMGD PS Sbjct: 121 EGEATDLVMDGDRVAGIYLRDGQMVTSKNVILTTGTFLRGVIHIGEVSRPGGRMGDDPSV 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 + F GRLKTGTP RLDG+TI WD E Q +D+ + FSF++ + +Q+ C Sbjct: 181 HMAERLDGFGLPMGRLKTGTPPRLDGRTIRWDILESQPSDDDPVLFSFLSKSVFAQQVNC 240 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 GIT TN +TH II N+ SA+Y G I GPRYCPSIEDK+VRF ++ HQIFLEPEGL Sbjct: 241 GITHTNEQTHDIIRANLGRSAMYGGHIDGVGPRYCPSIEDKVVRFADKTSHQIFLEPEGL 300 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 N +YPNGIST+LPE++Q ++R+I GLE I++PGYAIEYDY++P+ L PTLE + + Sbjct: 301 NDHTIYPNGISTSLPEDVQLDYVRSIHGLENATILQPGYAIEYDYVDPRALRPTLELRDV 360 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GL+LAGQINGTTGYEEAAAQGLV+G+N+A + + + FSR +SYIGVMIDDL ++GV Sbjct: 361 PGLYLAGQINGTTGYEEAAAQGLVSGLNAAAAALDKEPVLFSRRESYIGVMIDDLITRGV 420 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAE+R+SLR DNAD RLT G +GCI E R F+ + + +S L Sbjct: 421 SEPYRMFTSRAEFRLSLRADNADQRLTARGRAIGCISELRWSVFSAKMDKITDAKSRLGK 480 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + L+++++++ DG +TA E L+ DF L I P+ + + E+++ ++ Sbjct: 481 IYLSARDITAAGAQLNPDGPRKTALEALALADFGFAQLMQISPETSDIAPEIQEQVKKDA 540 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 YA Y RQ + ++ +E +LIP DY + LS EL KL +P ++ QA +IEG Sbjct: 541 LYAHYILRQERDVSALERDEAQLIPDGLDYLGVRGLSTELVTKLQKTRPVSIAQAGRIEG 600 Query: 601 MTPAALNLLLIYIKKNTV 618 MTPAAL LL+ IK++ + Sbjct: 601 MTPAALMLLIGAIKRHAL 618 >gi|197106987|ref|YP_002132364.1| glucose inhibited division protein A [Phenylobacterium zucineum HLK1] gi|196480407|gb|ACG79935.1| glucose inhibited division protein A [Phenylobacterium zucineum HLK1] Length = 620 Score = 664 bits (1712), Expect = 0.0, Method: Compositional matrix adjust. Identities = 335/611 (54%), Positives = 430/611 (70%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIVIGGGHAGCEAAA AA+ GA T L+THK TIG MSCNPAIGGLGKGHLVREIDA Sbjct: 7 TWDVIVIGGGHAGCEAAAAAARFGARTLLLTHKVETIGEMSCNPAIGGLGKGHLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGR+AD +GIQFR+LN KG AVRGPR+Q DR LYR AMQ E+L+ NL V V Sbjct: 67 LDGLMGRLADVSGIQFRMLNRSKGAAVRGPRSQIDRRLYREAMQAELLATPNLTVRAEAV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + ++ +V VVLTTGTFL+GVIH G+ +IPAGR+GD+P+ L + Sbjct: 127 EDLVVQDGRVTGVVGASGETYPAGRVVLTTGTFLKGVIHQGETRIPAGRIGDAPAIGLSD 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 GRLKTGTPARLDGKTI WD+ E Q AD IPFSF+T+ IT QI CG+T Sbjct: 187 RLYALGLSMGRLKTGTPARLDGKTIAWDRLEMQEADAEPIPFSFLTEAITVPQIRCGVTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETHRII E ++ SA+Y G + GPRYCPSIEDK+VRF ++ HQIFLEPEGL+ D Sbjct: 247 TTEETHRIIAERLEESAVYGGRVSGRGPRYCPSIEDKVVRFRDKTSHQIFLEPEGLDDDT 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST++ E Q F+RTIPGLE+V + R GYAIEYDY++P+EL+PTLE K++ GL+ Sbjct: 307 VYPNGISTSVSTETQDLFLRTIPGLEQVVVKRHGYAIEYDYVDPRELYPTLEAKRLPGLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEA AQGLVAG+N+AR ++ + F+R ++YIGV+IDDL ++GV EPY Sbjct: 367 LAGQINGTTGYEEAGAQGLVAGLNAARAASGAEPAQFARDEAYIGVLIDDLVTRGVTEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAE+R++LR DNAD RLT G++LG +G R F + R++ L LT Sbjct: 427 RMFTSRAEFRLTLRADNADQRLTGKGVELGVVGSERAGVFHVKQRALAEARAMANGLSLT 486 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + K DG+ R + L+YP +L I P +S V E+++I++SYA Sbjct: 487 PAEAQKAGLPVKADGQRRNLLQLLAYPTIGFDDLARIWPQVGDWSPAVREQVEIDASYAG 546 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ +A+ + +E +P D DY ++ LSNE++EKL+ ++P L QA++IEG+TP Sbjct: 547 YLDRQAADAEAFRRDEDLRLPADLDYGAIGGLSNEVREKLAAVRPLTLGQAARIEGVTPG 606 Query: 605 ALNLLLIYIKK 615 AL LL ++++ Sbjct: 607 ALTALLAHVRR 617 >gi|149204376|ref|ZP_01881343.1| glucose-inhibited division protein A [Roseovarius sp. TM1035] gi|149142261|gb|EDM30308.1| glucose-inhibited division protein A [Roseovarius sp. TM1035] Length = 623 Score = 663 bits (1711), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/612 (54%), Positives = 433/612 (70%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DVIVIGGGHAG EAA AA++G TAL+T + IG MSCNPAIGGLGKGHLVREID Sbjct: 5 KHFDVIVIGGGHAGAEAAHAAARMGVRTALVTLNRAGIGVMSCNPAIGGLGKGHLVREID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDG+MGRVAD AGIQFR+LN +KGPAV+GPR QADR++YR M RE+ S L++++GE Sbjct: 65 ALDGVMGRVADRAGIQFRLLNRRKGPAVQGPRAQADRKIYREEMLRELESCPTLEIVEGE 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 A F + ++ + + D I S VVLTTGTFLRGVIHIG P GRMGD P+ L Sbjct: 125 AADFVMQGERVAGVRLADGGEISASAVVLTTGTFLRGVIHIGDESYPGGRMGDRPAVMLA 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 F GRLKTGTP RLDGKTI W + E+Q D + FSF++ + T RQ+ CGIT Sbjct: 185 ERMDGFGLPMGRLKTGTPPRLDGKTIDWSRLEEQPGDNDPVLFSFLSKRPTARQVCCGIT 244 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH II EN+ SA+Y G I GPRYCPSIEDKIVRF ++ HQ+FLEPE L+ Sbjct: 245 HTNAQTHDIIRENLDRSAMYGGHIDGIGPRYCPSIEDKIVRFSDKTSHQVFLEPESLSDH 304 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 V+YPNGIST+LP +Q ++R+I GLE V I++PGYAIEYDY++P+ L L K + GL Sbjct: 305 VIYPNGISTSLPAVVQEAYVRSIVGLEHVEILQPGYAIEYDYVDPRALDSRLAVKAVPGL 364 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 FLAGQINGTTGYEEAAAQGLVAG+N+A ++ + + FSRTDSYIGVMIDDLT++GV EP Sbjct: 365 FLAGQINGTTGYEEAAAQGLVAGLNAALEAKGREPVQFSRTDSYIGVMIDDLTTRGVSEP 424 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R+SLR DNAD RLTP+G+ LGC+G+ R+ F ++ R L++ Sbjct: 425 YRMFTSRAEFRLSLRADNADQRLTPLGLDLGCVGDDRRAVFGDKMERLVQGRQRLEATTF 484 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 T + LS + QDG R+A++ LS+PD +L + + ++L ++ YA Sbjct: 485 TPRKLSESGFKVNQDGARRSAFQILSFPDVEFSDLLRLDQGYSEIDPECQQQLARDALYA 544 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 +Y RQ + +K +E +IP++F Y + LSNELK KL+ ++P NL QA++IEGMTP Sbjct: 545 SYIERQARDVAMMKRDEAHVIPENFAYDRIEGLSNELKGKLAQVQPENLAQAARIEGMTP 604 Query: 604 AALNLLLIYIKK 615 AAL+L+L +++ Sbjct: 605 AALSLILAKLRQ 616 >gi|83942028|ref|ZP_00954490.1| glucose-inhibited division protein A [Sulfitobacter sp. EE-36] gi|83847848|gb|EAP85723.1| glucose-inhibited division protein A [Sulfitobacter sp. EE-36] Length = 620 Score = 662 bits (1709), Expect = 0.0, Method: Compositional matrix adjust. Identities = 327/616 (53%), Positives = 430/616 (69%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DVIVIGGGHAG EAA +A++GA+TALIT IG MSCNPAIGGLGKGHLVREID Sbjct: 2 KHFDVIVIGGGHAGAEAAHASARMGANTALITMSRDGIGVMSCNPAIGGLGKGHLVREID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDG+MGRVAD AGIQFR+LN +KGPAV+GPR QADR +YR M E Q+NL +++GE Sbjct: 62 ALDGVMGRVADKAGIQFRLLNRRKGPAVQGPRAQADRAIYRKEMLAETERQKNLTIVEGE 121 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V F + +S V+ D I + VVLTTGTFLRGVIHIG + GRMGD S L Sbjct: 122 VTDFILDNGKVSGAVLADGEQIAAAEVVLTTGTFLRGVIHIGDVSRSGGRMGDKASVDLA 181 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 F+ GRLKTGTP RLDG+TI W+K E Q D+ + FSF+++ + QI CGIT Sbjct: 182 KRIDSFNLPLGRLKTGTPPRLDGRTIDWEKLESQPGDDEPVLFSFLSEATSAPQISCGIT 241 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN ETH+II +N+ SA+Y G I GPRYCPSIEDK+VRF ++ HQ+FLEPEG + Sbjct: 242 HTNEETHQIIRDNLSRSAMYGGHIDGVGPRYCPSIEDKVVRFADKTSHQVFLEPEGADDH 301 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LPE++Q ++R++ GLE V II+PGYAIEYDY++P+ L L + + GL Sbjct: 302 TIYPNGISTSLPEDVQLAYVRSMVGLENVEIIQPGYAIEYDYVDPRALDLALSVRTVPGL 361 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 +LAGQINGTTGYEEAAAQGLVAG+N+A + + + FSR DSYIGVMIDDLT++GV EP Sbjct: 362 YLAGQINGTTGYEEAAAQGLVAGLNAALSAQGKEPVTFSRADSYIGVMIDDLTTRGVTEP 421 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R+SLR DNAD RLTP+ + LGC+ + R F + + + + L Sbjct: 422 YRMFTSRAEFRLSLRADNADQRLTPLAIALGCVSQERVAHFNAKMAKIDAAMAELTKTPY 481 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 SK + + I QDG RT ++ L++PD + + + I P + +++ ++ YA Sbjct: 482 ASKAIEAAGIKVSQDGTKRTGFQLLAFPDVTFEQIVLINPALETVEPEIRRQVERDALYA 541 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y RQ + ++ +E +IP +FDY ++ LSNEL KLS+ +P NL QA++I+GMTP Sbjct: 542 NYIARQQRDIDLLQKDEAHVIPANFDYEAIDGLSNELTSKLSLTRPTNLAQAARIDGMTP 601 Query: 604 AALNLLLIYIKKNTVK 619 +AL LLL ++K+ + K Sbjct: 602 SALTLLLSHLKRGSQK 617 >gi|99082705|ref|YP_614859.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ruegeria sp. TM1040] gi|123077394|sp|Q1GCL9|MNMG_SILST RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|99038985|gb|ABF65597.1| Glucose inhibited division protein A [Ruegeria sp. TM1040] Length = 627 Score = 662 bits (1709), Expect = 0.0, Method: Compositional matrix adjust. Identities = 335/611 (54%), Positives = 423/611 (69%), Gaps = 2/611 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+V+GGGHAG EAA +A++G TAL+T + IG MSCNPAIGGLGKGHLVREIDAL Sbjct: 9 YDVVVVGGGHAGTEAAHASARMGVRTALVTLRRDGIGVMSCNPAIGGLGKGHLVREIDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DG+MGRVAD AGIQFR+LN +KGPAV+GPR QADR +YR M R +Q NLD+I+GEV Sbjct: 69 DGVMGRVADLAGIQFRLLNRRKGPAVQGPRAQADRSIYRKEMLRATEAQSNLDIIEGEVV 128 Query: 126 GFNTEKNI-ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 F E + I++ D S IR VVLT+GTFL GVIHIG GRMGD PS L Sbjct: 129 DFLMESPTRVRGIILDDQSEIRAECVVLTSGTFLNGVIHIGNKSSSGGRMGDRPSIKLAE 188 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 F+ GRLKTGTP RLDG+TI WD + Q DE FSF++ + QI CGIT Sbjct: 189 RLKSFELPLGRLKTGTPPRLDGRTINWDILDSQPGDEDPTLFSFLSTNTSAPQIACGITH 248 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH II +N++ SA+Y G I+ GPRYCPSIEDKIVRF ++ HQIFLEPEG+N Sbjct: 249 TNEKTHEIIRDNLELSAMYGGHIEGVGPRYCPSIEDKIVRFADKTSHQIFLEPEGVNDHT 308 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LPE++Q ++R+I GLE +++PGYAIEYDY++P+ L TLE + + GL+ Sbjct: 309 VYPNGISTSLPEDVQVDYVRSIVGLENAEVLQPGYAIEYDYVDPRALRSTLELRDVEGLY 368 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEAAAQGLVAG+N+A K I F R++SYIGVMIDDL + GV EPY Sbjct: 369 LAGQINGTTGYEEAAAQGLVAGLNAASHRLKQQEIVFGRSNSYIGVMIDDLITNGVTEPY 428 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAE+R+SLR DNAD RLTPIG LGCI E R+ F + + +S L S++LT Sbjct: 429 RMFTSRAEFRLSLRADNADQRLTPIGYDLGCISEVRRSEFDRKMDAITRTKSALTSVLLT 488 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 K L I QDG R + L++P ++ + P+ + + E++ +S YA Sbjct: 489 PKQLLEAGIQVNQDGNKRNGLDVLAFPKVEFDDILPLFPELADTETSIREQVTRDSLYAN 548 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ E +K +E+ IP+DF Y + LS EL++KL +P +L QA++I+GMTPA Sbjct: 549 YIARQEKEVASLKRDEQYRIPRDFSY-EIDGLSMELRQKLERSRPESLAQAARIDGMTPA 607 Query: 605 ALNLLLIYIKK 615 AL L+L +KK Sbjct: 608 ALALMLGSLKK 618 >gi|81170573|sp|Q6ND15|MNMG_RHOPA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A Length = 622 Score = 662 bits (1709), Expect = 0.0, Method: Compositional matrix adjust. Identities = 332/615 (53%), Positives = 438/615 (71%), Gaps = 1/615 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 S+DVIVIGGGHAGCEAAA AA++GA+TAL+TH+ +T+G+MSCNPAIGGLGKGHLVRE+DA Sbjct: 4 SFDVIVIGGGHAGCEAAAAAARIGAATALVTHRFATVGAMSCNPAIGGLGKGHLVREVDA 63 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRVADA GIQFR+LN +KGPAVRGPR QADR+LY AMQ I NL VI+GE Sbjct: 64 LDGLMGRVADAGGIQFRMLNRRKGPAVRGPRAQADRKLYAAAMQTAIQGFPNLSVIEGEA 123 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + +S I + D + VV+TTGTFLRG+IH+G+ PAGR+ ++P+ L + Sbjct: 124 DALLWQDGRVSGIRLGDGREFAAAAVVITTGTFLRGLIHLGERSWPAGRIDEAPAMGLSS 183 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 SF F GRLKTGTP RLDG+TI W E Q D+ PFS +T IT QIECGITR Sbjct: 184 SFEALGFKLGRLKTGTPPRLDGRTIDWSAVEMQPGDDPAEPFSVLTPAITTPQIECGITR 243 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T TH +I N+ S +YSG I+S GPRYCPSIEDKIV+FG+R+GHQIFLEPEGL+ Sbjct: 244 TTTATHEVIRANVHRSPMYSGQIQSTGPRYCPSIEDKIVKFGDRDGHQIFLEPEGLDDPT 303 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LPEE+Q ++TIPGLE+ ++RPGYAIEYD+++P+EL PTL+TK++ GLF Sbjct: 304 VYPNGISTSLPEEVQRAILKTIPGLERTEMLRPGYAIEYDHVDPRELEPTLQTKRLRGLF 363 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEAAAQGLVAG+N+ + D + F R D Y+GVMIDDL ++G+ EPY Sbjct: 364 LAGQINGTTGYEEAAAQGLVAGLNAGLSAGGGDLVVFDRADGYLGVMIDDLVTRGITEPY 423 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR++LR DNAD RLT G+ LGC+G R + + ++L +SL +T Sbjct: 424 RMFTSRAEYRLTLRADNADQRLTDKGLALGCVGVERSAFHHDKMSALSDAKALAQSLSIT 483 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + ++ +DG+ R+A++ LSYP+ + +I P+ K + ++I++ Y Sbjct: 484 PNEAAKHGLALNRDGQRRSAFDLLSYPEIEWAQVRAIWPELGKVDPAIAVHVEIDAKYHV 543 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + + + +E L D DY+++P LSNE + +L +P + QA +++G+TPA Sbjct: 544 YLERQTADVEAFRRDES-LGLTDVDYAAVPGLSNEARTRLERHRPHTVGQAGRLDGITPA 602 Query: 605 ALNLLLIYIKKNTVK 619 AL +L Y+++ K Sbjct: 603 ALGILAAYLRREQRK 617 >gi|126734409|ref|ZP_01750156.1| glucose-inhibited division protein A [Roseobacter sp. CCS2] gi|126717275|gb|EBA14139.1| glucose-inhibited division protein A [Roseobacter sp. CCS2] Length = 625 Score = 662 bits (1708), Expect = 0.0, Method: Compositional matrix adjust. Identities = 330/611 (54%), Positives = 432/611 (70%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAG EAA AA++G TAL+T +IG MSCNPAIGGLGKGHLVREIDAL Sbjct: 9 YDVIVIGGGHAGAEAAHAAARMGVRTALVTLTKHSIGVMSCNPAIGGLGKGHLVREIDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DG+MGRVAD AGIQFR+LN KKGPAV+GPR Q+DR++YR MQ E+ + +NL +++GE Sbjct: 69 DGVMGRVADKAGIQFRLLNRKKGPAVQGPRAQSDRQIYRTEMQSELNALKNLVIVEGEAV 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 ++ + M D S + +V+LT GTFLRGVIHIG + P GRMGD PS + Sbjct: 129 DLLMSGERVTGVQMHDGSALTAQSVILTMGTFLRGVIHIGDVSRPGGRMGDDPSVKMAER 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 F GRLKTGTP RLDG+TI WDK E Q +D+ + FSF++ QI+CGIT T Sbjct: 189 LDSFSLPLGRLKTGTPPRLDGRTIAWDKLEAQPSDKDPVLFSFLSTGTYAPQIDCGITHT 248 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N +TH II +N+ SA+Y G I GPRYCPSIEDKIVRF E+N HQIFLEPEG+ V Sbjct: 249 NAQTHDIIRDNLGRSAMYGGQIDGVGPRYCPSIEDKIVRFAEKNSHQIFLEPEGVTDHTV 308 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YPNGIST+LPE++Q ++ +I GLE I++PGYAIEYDY++P+ L TLE + + GLFL Sbjct: 309 YPNGISTSLPEDVQKAYVNSIYGLENALILQPGYAIEYDYVDPRALQATLELRDVPGLFL 368 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAAAQGLVAG+N+A + D I FSR +SYIGVMIDDL ++GV EPYR Sbjct: 369 AGQINGTTGYEEAAAQGLVAGLNAAAQVRGRDPITFSRRESYIGVMIDDLITRGVSEPYR 428 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAE+R+SLR DNAD RLT G LGC+GE R F++ +Q N + L ++ L++ Sbjct: 429 MFTSRAEFRLSLRADNADQRLTQRGRNLGCVGEGRWAYFSEKMQGINLAKEKLANISLSA 488 Query: 486 KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAY 545 + ++ST + DG ++A E L+ DFS ++L + +A + + + ++++ ++ YA Y Sbjct: 489 REIASTGVKLNADGPRKSALEALALSDFSFRHLSKLDQNADEIPAHIQDQVKKDALYAHY 548 Query: 546 TGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAA 605 RQ + ++ +EK +IP DFDY+ + LSNE+ KL+ +P ++ A +IEGMTPAA Sbjct: 549 IARQERDIAALERDEKHVIPADFDYAGVRGLSNEIAAKLAATRPVSIAHAGRIEGMTPAA 608 Query: 606 LNLLLIYIKKN 616 L L++ KK Sbjct: 609 LMLIIAATKKQ 619 >gi|89067425|ref|ZP_01154938.1| glucose-inhibited division protein A [Oceanicola granulosus HTCC2516] gi|89046994|gb|EAR53048.1| glucose-inhibited division protein A [Oceanicola granulosus HTCC2516] Length = 622 Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust. Identities = 325/616 (52%), Positives = 428/616 (69%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M + SYDV+VIGGGHAG EAA AA+LG S AL+T + IG MSCNPAIGGLGKGHLVR Sbjct: 1 MKHSSYDVVVIGGGHAGSEAAHAAARLGCSVALVTLSAAGIGVMSCNPAIGGLGKGHLVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDALDG+MGRVADAAGIQFR+LN +KGPAV+GPR QADR+LYR AMQ + +Q NL + Sbjct: 61 EIDALDGVMGRVADAAGIQFRLLNRRKGPAVQGPRAQADRKLYRHAMQDALAAQPNLRIF 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 +GE + + + + D + V+LTTGTFLRGVIHIG + P GR+G+SPS Sbjct: 121 EGEAVDLLVKAGKVDGVRLADGGEVASKAVILTTGTFLRGVIHIGDVARPGGRIGESPSV 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 + +F GRLKTGTP RLDG+TI WD E Q D+ FSF++ + T RQI C Sbjct: 181 RMAERIDEFGLPLGRLKTGTPPRLDGRTIRWDVLEMQPGDDEPTMFSFLSSQPTARQISC 240 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 GIT TN TH II +N+ SA+Y G I GPRYCPSIEDK+VRF E+ HQ+FLEPEGL Sbjct: 241 GITHTNERTHDIIRDNLSRSAMYGGHIGGTGPRYCPSIEDKVVRFSEKPSHQVFLEPEGL 300 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + VYPNGIST+LPE++Q ++R+I GLE V I++PGYAIEYDY++P+ L PTLE K + Sbjct: 301 DDPTVYPNGISTSLPEDVQDAYVRSITGLEDVKILQPGYAIEYDYVDPRALRPTLEVKDV 360 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 +GL+LAGQINGTTGYEEAAAQGLVAG+++ + + + FSRT SYIGVM+DDL ++GV Sbjct: 361 AGLYLAGQINGTTGYEEAAAQGLVAGLSAGAAALGREPLTFSRTTSYIGVMVDDLITRGV 420 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAE+R+SLR DNAD RLT G + GC+GE R +++ R L+ Sbjct: 421 SEPYRMFTSRAEFRLSLRADNADQRLTEQGRQAGCVGEERWSSYSRKRDALATGRRELER 480 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 +++L+ + DG R+ E L+ D S ++L ++ P+ + + +L+ ++ Sbjct: 481 RTFKARDLAGRGANLNSDGAARSGTEALALTDISFEDLIALDPELATVAPDIQRQLKNDA 540 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 YA Y RQ + ++ ++ +++P+ DY + LSNEL EKL+ +P + AS+IEG Sbjct: 541 LYANYIERQAQDIAALRRDDAQVLPEKLDYREIQGLSNELAEKLNHSRPATIAHASRIEG 600 Query: 601 MTPAALNLLLIYIKKN 616 MTPAAL +LL IK++ Sbjct: 601 MTPAALLILLAKIKRD 616 >gi|39933371|ref|NP_945647.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Rhodopseudomonas palustris CGA009] gi|39652996|emb|CAE25738.1| putative glucose inhibited division protein A (GidA) [Rhodopseudomonas palustris CGA009] Length = 646 Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust. Identities = 332/615 (53%), Positives = 438/615 (71%), Gaps = 1/615 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 S+DVIVIGGGHAGCEAAA AA++GA+TAL+TH+ +T+G+MSCNPAIGGLGKGHLVRE+DA Sbjct: 28 SFDVIVIGGGHAGCEAAAAAARIGAATALVTHRFATVGAMSCNPAIGGLGKGHLVREVDA 87 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRVADA GIQFR+LN +KGPAVRGPR QADR+LY AMQ I NL VI+GE Sbjct: 88 LDGLMGRVADAGGIQFRMLNRRKGPAVRGPRAQADRKLYAAAMQTAIQGFPNLSVIEGEA 147 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + +S I + D + VV+TTGTFLRG+IH+G+ PAGR+ ++P+ L + Sbjct: 148 DALLWQDGRVSGIRLGDGREFAAAAVVITTGTFLRGLIHLGERSWPAGRIDEAPAMGLSS 207 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 SF F GRLKTGTP RLDG+TI W E Q D+ PFS +T IT QIECGITR Sbjct: 208 SFEALGFKLGRLKTGTPPRLDGRTIDWSAVEMQPGDDPAEPFSVLTPAITTPQIECGITR 267 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T TH +I N+ S +YSG I+S GPRYCPSIEDKIV+FG+R+GHQIFLEPEGL+ Sbjct: 268 TTTATHEVIRANVHRSPMYSGQIQSTGPRYCPSIEDKIVKFGDRDGHQIFLEPEGLDDPT 327 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LPEE+Q ++TIPGLE+ ++RPGYAIEYD+++P+EL PTL+TK++ GLF Sbjct: 328 VYPNGISTSLPEEVQRAILKTIPGLERTEMLRPGYAIEYDHVDPRELEPTLQTKRLRGLF 387 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEAAAQGLVAG+N+ + D + F R D Y+GVMIDDL ++G+ EPY Sbjct: 388 LAGQINGTTGYEEAAAQGLVAGLNAGLSAGGGDLVVFDRADGYLGVMIDDLVTRGITEPY 447 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR++LR DNAD RLT G+ LGC+G R + + ++L +SL +T Sbjct: 448 RMFTSRAEYRLTLRADNADQRLTDKGLALGCVGVERSAFHHDKMSALSDAKALAQSLSIT 507 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + ++ +DG+ R+A++ LSYP+ + +I P+ K + ++I++ Y Sbjct: 508 PNEAAKHGLALNRDGQRRSAFDLLSYPEIEWAQVRAIWPELGKVDPAIAVHVEIDAKYHV 567 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + + + +E L D DY+++P LSNE + +L +P + QA +++G+TPA Sbjct: 568 YLERQTADVEAFRRDES-LGLTDVDYAAVPGLSNEARTRLERHRPHTVGQAGRLDGITPA 626 Query: 605 ALNLLLIYIKKNTVK 619 AL +L Y+++ K Sbjct: 627 ALGILAAYLRREQRK 641 >gi|300024784|ref|YP_003757395.1| glucose inhibited division protein A [Hyphomicrobium denitrificans ATCC 51888] gi|299526605|gb|ADJ25074.1| glucose inhibited division protein A [Hyphomicrobium denitrificans ATCC 51888] Length = 623 Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust. Identities = 340/620 (54%), Positives = 432/620 (69%), Gaps = 1/620 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M +R+YDVIV+GGGHAG EAAA AA++GA TAL+TH +T+G MSCNPAIGGLGKGHLVR Sbjct: 1 MTSRTYDVIVVGGGHAGTEAAAAAARMGARTALVTHSFATVGEMSCNPAIGGLGKGHLVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDALDGLMGRVAD AGIQFR+LN KGPAV GPRTQADR+LYR AMQ EI + LDV+ Sbjct: 61 EIDALDGLMGRVADVAGIQFRLLNRSKGPAVHGPRTQADRKLYRQAMQAEIAAIPGLDVV 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 +G V E ++ +V D + VVLTTGTFL G+IH+G+ KIPAGR G++P+ Sbjct: 121 EGGVEDLIVEDGRVAGVVTGDGRALSAGAVVLTTGTFLNGLIHMGEQKIPAGRAGEAPAL 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 L + GRLKTGTPARLDGK+I W E Q AD+ +PFSF+T+++T QI C Sbjct: 181 KLSDRLYALGLKLGRLKTGTPARLDGKSIDWSGLEMQKADDEPVPFSFLTERVTTPQIAC 240 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 GIT T ETH II N+ S ++SG I+S GPRYCPSIEDK+VRF +R+ HQIFLEPEGL Sbjct: 241 GITYTTPETHDIIRANLARSPMFSGQIESIGPRYCPSIEDKVVRFADRSSHQIFLEPEGL 300 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + D +YPNG+ST+LP E+Q F+RT+PGL V I RPGYAIEYDY++P+EL LE K++ Sbjct: 301 DDDTIYPNGVSTSLPVEVQDAFLRTMPGLANVVIKRPGYAIEYDYVDPRELTSGLEVKRL 360 Query: 361 SGLFLAGQINGTTGYEEAAAQG-LVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 LFLAGQINGTTGYEEA AQG L + D SRTD Y+GVM+DDL ++G Sbjct: 361 PRLFLAGQINGTTGYEEAGAQGLLAGINAALAAGGAGDPFVVSRTDGYVGVMVDDLVTRG 420 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 V EPYRMFTSRAE+R+ LR DNAD RLT G+ LGC+G RQ F + + SLL Sbjct: 421 VSEPYRMFTSRAEFRLKLRADNADQRLTAAGIVLGCVGRARQAHFEAKTKALSEGLSLLN 480 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 L LT + ++ +DG+ RTA+E LS+PD S +L I P+ + + +L ++ Sbjct: 481 QLSLTPTEAARHGLTVNRDGRRRTAFELLSFPDISFDHLMPIWPELGGLAPQIAAQLGVD 540 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + YAAY RQ + ++K +E IP DFDY ++P+LS E+++KL +P + QA +IE Sbjct: 541 ARYAAYLRRQDEDVAQLKRDEAVSIPVDFDYGAIPSLSAEVRQKLVQHRPGTIAQAGRIE 600 Query: 600 GMTPAALNLLLIYIKKNTVK 619 G+TPAAL LL +K + Sbjct: 601 GVTPAALLTLLARVKAGRAR 620 >gi|254455349|ref|ZP_05068778.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Candidatus Pelagibacter sp. HTCC7211] gi|207082351|gb|EDZ59777.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Candidatus Pelagibacter sp. HTCC7211] Length = 623 Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust. Identities = 325/615 (52%), Positives = 427/615 (69%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 S+DV++IGGGHAGCEAAA +A+LG +TAL THK TIG MSCNPAIGGLGKGHLVREIDA Sbjct: 6 SFDVVIIGGGHAGCEAAAASARLGVNTALFTHKKETIGEMSCNPAIGGLGKGHLVREIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDG+MG VAD +GIQFR+LN +GPAVRGPRTQ+DR LYR MQ ++ + NL++ V Sbjct: 66 LDGVMGEVADKSGIQFRLLNRSRGPAVRGPRTQSDRSLYRKYMQEKLANYCNLNIFSDPV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 F +KN I+ + + + CS ++LTTGTFL G+IHIG + PAGR + PS L Sbjct: 126 IKFIFDKNTITGFMTKKGKKVLCSKLILTTGTFLNGLIHIGDERTPAGRYDEKPSTGLSE 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 K++F GRLKTGTP RLD +TI ++ E+QFAD+ FSF+T K N+Q+ C +T Sbjct: 186 QLEKYNFKIGRLKTGTPPRLDSRTINYENLEEQFADDNPYFFSFLTKKNINKQVSCRMTY 245 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN + H+II +N+ SA+YSG I+ GPRYCPSIEDKIV+F ++ HQIFLEPEGLN Sbjct: 246 TNDKVHKIIEKNLSKSAMYSGSIQGVGPRYCPSIEDKIVKFADKGRHQIFLEPEGLNDHT 305 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q + I GLE V+IIRPGYAIEYDYI+P+ELF TLE KKIS L+ Sbjct: 306 IYPNGISTSLPADVQQEICNNINGLENVSIIRPGYAIEYDYIDPRELFLTLEAKKISNLY 365 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEAAAQGL+AGIN+A KL+ R+D+YIGVMIDDL +KGV EPY Sbjct: 366 LAGQINGTTGYEEAAAQGLIAGINAALSHKKLEPFILDRSDAYIGVMIDDLVTKGVAEPY 425 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+SLR DNAD RLT GM++G IG+ R+ + + N + + ++ Sbjct: 426 RMFTSRAEYRLSLRSDNADQRLTAKGMEIGLIGDVRKTLYLDKFDKINQINVKMGQSTIS 485 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 I +DG R++ E L+ + + I PD FS + E+++I + Y Sbjct: 486 PNKADQFGIKIAKDGILRSSNEILTQKGVDMNKIREIWPDIPYFSKEIDEQVEINAHYRG 545 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y +Q + K +E +IP +Y L LSNE+K K ++P + QA +I+G+TPA Sbjct: 546 YLKKQKADILAFKRDENLIIPDKINYDGLSGLSNEVKAKFKEIRPKTMGQALRIDGITPA 605 Query: 605 ALNLLLIYIKKNTVK 619 A+ +LL ++K+ ++K Sbjct: 606 AVYILLSHVKRKSIK 620 >gi|192288727|ref|YP_001989332.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rhodopseudomonas palustris TIE-1] gi|254811517|sp|B3Q8A7|MNMG_RHOPT RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|192282476|gb|ACE98856.1| glucose inhibited division protein A [Rhodopseudomonas palustris TIE-1] Length = 622 Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust. Identities = 333/615 (54%), Positives = 438/615 (71%), Gaps = 1/615 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 S+DVIVIGGGHAGCEAAA AA++GA+TAL+TH+ +T+G+MSCNPAIGGLGKGHLVRE+DA Sbjct: 4 SFDVIVIGGGHAGCEAAAAAARIGAATALVTHRFATVGAMSCNPAIGGLGKGHLVREVDA 63 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRVADA GIQFR+LN +KGPAVRGPR QADR+LY AMQ I NL VI+GE Sbjct: 64 LDGLMGRVADAGGIQFRMLNRRKGPAVRGPRAQADRKLYAAAMQIAIQGFPNLSVIEGEA 123 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + +S I + D + VV+TTGTFLRG+IH+G+ PAGR+ ++P+ L + Sbjct: 124 DALLWQDGRVSGIRLGDGREFAAAAVVITTGTFLRGLIHLGERSWPAGRIDEAPAMGLSS 183 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 SF F GRLKTGTP RLDG+TI W E Q D+ PFS +T IT QIECGITR Sbjct: 184 SFEALGFKLGRLKTGTPPRLDGRTIDWSAVEMQPGDDPAEPFSVLTPAITTPQIECGITR 243 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T TH +I N+ S +YSG I+S GPRYCPSIEDKIV+FG+R+GHQIFLEPEGL+ Sbjct: 244 TTPATHEVIRANVHRSPMYSGQIQSTGPRYCPSIEDKIVKFGDRDGHQIFLEPEGLDDPT 303 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LPEE+Q ++TIPGLE+ ++RPGYAIEYD+++P+EL PTL+TK++ GLF Sbjct: 304 VYPNGISTSLPEEVQRAILKTIPGLERTEMLRPGYAIEYDHVDPRELEPTLQTKRLRGLF 363 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEAAAQGLVAG+N+A + D F R D Y+GVMIDDL ++G+ EPY Sbjct: 364 LAGQINGTTGYEEAAAQGLVAGLNAALSAGGGDRAVFDRADGYLGVMIDDLVTRGITEPY 423 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR++LR DNAD RLT G+ LGC+G R + + ++L +SL +T Sbjct: 424 RMFTSRAEYRLTLRADNADQRLTDKGLALGCVGVERSAFHHDKMAALSDAKALAQSLSIT 483 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + ++ +DG+ R+A++ LSYP+ + +I P+ K + ++I++ Y Sbjct: 484 PNEAAKHGLALNRDGQRRSAFDLLSYPEIEWAQVRAIWPELGKVDPAIAVHVEIDAKYHV 543 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + + + +E L D DY+++P LSNE + +L +P + QA +++G+TPA Sbjct: 544 YLERQTADVEAFRRDES-LGLTDVDYAAVPGLSNEARTRLERHRPHTVGQAGRLDGITPA 602 Query: 605 ALNLLLIYIKKNTVK 619 AL +L Y+++ K Sbjct: 603 ALGILAAYLRREQRK 617 >gi|312115381|ref|YP_004012977.1| glucose inhibited division protein A [Rhodomicrobium vannielii ATCC 17100] gi|311220510|gb|ADP71878.1| glucose inhibited division protein A [Rhodomicrobium vannielii ATCC 17100] Length = 621 Score = 658 bits (1697), Expect = 0.0, Method: Compositional matrix adjust. Identities = 337/617 (54%), Positives = 432/617 (70%), Gaps = 1/617 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M R++DVIV+GGGHAGCEAAA AA++GA+TAL+THK +T+G MSCNPAIGGLGKGHLVR Sbjct: 1 MAERAFDVIVVGGGHAGCEAAAAAARMGAATALVTHKAATLGEMSCNPAIGGLGKGHLVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DALDGLMGRV D AGIQFR+LN KGPAV+GPR QADR+LYR MQ + +Q+ L V+ Sbjct: 61 EVDALDGLMGRVIDKAGIQFRMLNRSKGPAVQGPRAQADRKLYRREMQAALAAQDGLTVV 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 + V E ++ +V +R V +TTGTFL+GVIH+G+ + PAGR+G++PS Sbjct: 121 EDAVEDLLVESGAVAGVVTASGRELRSGAVAITTGTFLKGVIHLGETRTPAGRVGEAPSI 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 L + GRLKTGTPARLDG+TI + + + Q D +PFSFMTD+I QI C Sbjct: 181 GLSDRLYALGLRMGRLKTGTPARLDGRTIDFTRLDSQPGDAPPVPFSFMTDRIETPQIAC 240 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT T ETH II NI + +YSG I+ GPRYCPSIEDK+VRF +R HQIFLEPEGL Sbjct: 241 AITATTAETHAIIRANIHRAPMYSGQIEGVGPRYCPSIEDKVVRFADRESHQIFLEPEGL 300 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + VYPNGIST+LPE++Q FI TIPGLE+ I+RPGYAIEYDY++P+EL TLE K++ Sbjct: 301 DDPTVYPNGISTSLPEDVQRAFIATIPGLERATIVRPGYAIEYDYVDPRELTATLEVKRL 360 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSAR-KSNKLDCICFSRTDSYIGVMIDDLTSKG 419 LFLAGQINGTTGYEEAA QGLVAGIN+A S + SRTD YIGVMIDDL ++G Sbjct: 361 PRLFLAGQINGTTGYEEAAGQGLVAGINAALVASGGVADFVVSRTDGYIGVMIDDLVTRG 420 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 V EPYRMFTSRAEYR+ LR DNAD RLTP+G + GC+G R+ +A R LL+ Sbjct: 421 VSEPYRMFTSRAEYRLRLRADNADERLTPLGARAGCVGSAREAAYAAKADALGSARRLLE 480 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 +L LT + I +DG+ R+A++ L+ P SI L + P+ +ERL+++ Sbjct: 481 TLTLTPDEAARHGIVLNRDGRRRSAFDLLALPGQSIAALARVWPELGDMPRGTVERLEVD 540 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + YA Y RQ + +E IP D++++ LSNE+++KL +P L QA++I+ Sbjct: 541 ARYAVYLDRQEASIVAFRKDEAVAIPPALDFAAIQGLSNEVRQKLDRHRPATLAQAARID 600 Query: 600 GMTPAALNLLLIYIKKN 616 GMTPAAL +LL +I+K Sbjct: 601 GMTPAALMVLLAHIRKT 617 >gi|85706894|ref|ZP_01037984.1| glucose-inhibited division protein A [Roseovarius sp. 217] gi|85668505|gb|EAQ23376.1| glucose-inhibited division protein A [Roseovarius sp. 217] Length = 620 Score = 656 bits (1693), Expect = 0.0, Method: Compositional matrix adjust. Identities = 336/612 (54%), Positives = 434/612 (70%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DVIVIGGGHAG +A AA++GA TAL+T S IG MSCNPAIGGLGKGHLVREID Sbjct: 2 KHFDVIVIGGGHAGADAGHAAARMGARTALVTLSRSGIGVMSCNPAIGGLGKGHLVREID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDG+MGRVAD AGIQFR+LN +KGPAV+GPR QADR++Y M EI S L +I GE Sbjct: 62 ALDGVMGRVADRAGIQFRLLNRRKGPAVQGPRAQADRKIYCEEMLGEIESCSGLSIIVGE 121 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 A F + ++ + + D S I +TV+LTTGTFLRGVIHIG++ P GRMGD PS L Sbjct: 122 AADFLMQGERVAGVRLIDGSEISGATVILTTGTFLRGVIHIGEVSRPGGRMGDRPSIPLA 181 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 F GRLKTGTP RL+GKTI W + E+Q D+ FSFM+ + RQI CGIT Sbjct: 182 ERLDGFGLAMGRLKTGTPPRLNGKTIDWARLEEQPGDDDPTLFSFMSKAPSARQISCGIT 241 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH II EN+ SA+Y G I GPRYCPSIEDKIVRF ++ HQIFLEPE L+ D Sbjct: 242 HTNTQTHDIIRENLGRSAMYGGHIDGIGPRYCPSIEDKIVRFSDKCSHQIFLEPESLSDD 301 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 V+YPNGIST+LP E+Q ++R+I GLE I++PGYAIEYDY++P+ L L K + GL Sbjct: 302 VIYPNGISTSLPVEVQEAYVRSIHGLEAAEILQPGYAIEYDYVDPRALDGRLAVKSVPGL 361 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 +LAGQINGTTGYEEAAAQGLVAG+N+A ++ FSRTDSYIGVMIDDLT++GV EP Sbjct: 362 YLAGQINGTTGYEEAAAQGLVAGLNAALEALGRAPAQFSRTDSYIGVMIDDLTTRGVSEP 421 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R+SLR DNAD R+TP G++LGC+ R+ F K ++ + R L++ Sbjct: 422 YRMFTSRAEFRLSLRADNADQRMTPFGLELGCVSAPRKVAFEKKMERLSAARLRLETASY 481 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 T ++LS ++ DG R+A++ LSYPD + +L + P+ + +++ ++ YA Sbjct: 482 TPRHLSDLGLNVNHDGARRSAFQILSYPDVTFSDLVQLDPEFAEIDLETQKQIAKDALYA 541 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y RQ + ++K +E +IP+ F Y S+ LSNELK KL+ ++P NL QA +IEGMTP Sbjct: 542 TYIERQNRDVAKLKRDEAYVIPRSFGYGSIEGLSNELKSKLADVRPENLAQAGRIEGMTP 601 Query: 604 AALNLLLIYIKK 615 AAL+L+L +++ Sbjct: 602 AALSLILAKLRQ 613 >gi|315497188|ref|YP_004085992.1| glucose inhibited division protein a [Asticcacaulis excentricus CB 48] gi|315415200|gb|ADU11841.1| glucose inhibited division protein A [Asticcacaulis excentricus CB 48] Length = 620 Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust. Identities = 331/609 (54%), Positives = 416/609 (68%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA++GA T L+THK T+G MSCNPAIGGLGKGHLVREIDAL Sbjct: 5 WDVIVVGGGHAGAEAATAAARMGAKTLLLTHKIETLGEMSCNPAIGGLGKGHLVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DG+MGR+AD GIQF++LN KGPAVRGPR Q DR+LYR AMQ E+ S ENL +I V Sbjct: 65 DGVMGRMADIGGIQFKMLNRSKGPAVRGPRAQIDRKLYREAMQAELQSTENLTIIAAAVE 124 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V R VVLTTGTFLRG+IHIG+ ++ AGR GD P+N L Sbjct: 125 DLILEGDTVVGTVDAQGVEYRSKAVVLTTGTFLRGIIHIGEKRMAAGRFGDEPANGLGQR 184 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 D GRLKTGTPARLDGKTI WD EKQ D PFS + I QI CGIT T Sbjct: 185 LYDLKLDMGRLKTGTPARLDGKTINWDVLEKQEGDAIPTPFSTLNAAINRPQITCGITYT 244 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N +THRII E I SA+Y G + GPRYCPSIEDK+VRF +++ HQ+FLEPEG + D V Sbjct: 245 NADTHRIIQERITESAVYGGHLSGRGPRYCPSIEDKVVRFSDKDSHQVFLEPEGYDDDTV 304 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YPNGIST++ E Q F+RTI GLE V I R YAIEYDY++P+EL+PTLE K++ GLFL Sbjct: 305 YPNGISTSVSEATQEAFLRTIRGLENVVIKRYAYAIEYDYVDPRELYPTLELKRLPGLFL 364 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEA AQGL+AG+N+A ++ L + R ++YIGVMIDDL +KGV EPYR Sbjct: 365 AGQINGTTGYEEAGAQGLMAGLNAAARAGGLSPLVLGRDEAYIGVMIDDLVTKGVTEPYR 424 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAE+R+ LR DNAD RL+ I +K G +GERR+ + + Q R + L LT Sbjct: 425 MFTSRAEFRLKLRADNADQRLSDIALKTGLMGERRKTHWLEKKQALAEARQRAEDLKLTP 484 Query: 486 KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAY 545 ++ I DG+ R + LSY S L ++ P+ + +S V E+++I++ Y+ Y Sbjct: 485 NEANALGIRVNADGQKRNLLQLLSYDTCSRDKLETVWPELKDWSDSVFEQVEIDALYSGY 544 Query: 546 TGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAA 605 GRQ E + +E +P+D DY+ + LSNE +EKL ++P L QA +IEGMTP A Sbjct: 545 LGRQAAEIDAFRKDENLALPEDLDYARVGGLSNEAREKLGRVRPLTLGQARRIEGMTPGA 604 Query: 606 LNLLLIYIK 614 L LL +++ Sbjct: 605 LTALLFHVR 613 >gi|259417090|ref|ZP_05741009.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Silicibacter sp. TrichCH4B] gi|259345996|gb|EEW57810.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Silicibacter sp. TrichCH4B] Length = 624 Score = 655 bits (1691), Expect = 0.0, Method: Compositional matrix adjust. Identities = 330/616 (53%), Positives = 434/616 (70%), Gaps = 2/616 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M + YDV+V+GGGHAG EAA +A++G TAL+T + IG MSCNPAIGGLGKGHLVR Sbjct: 1 MKHSHYDVVVVGGGHAGTEAAHASARMGVRTALVTLRRDGIGVMSCNPAIGGLGKGHLVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDA+DG+MGRVAD AGIQFR+LN +KGPAV+GPR QADR +YR + + +Q NL++I Sbjct: 61 EIDAMDGVMGRVADLAGIQFRLLNRRKGPAVQGPRAQADRSIYRTEVLKATETQLNLNII 120 Query: 121 QGEVAGFNTE-KNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 +GEV F E +N + + + D S I S VVLT+GTFL GVIHIG GRMGD PS Sbjct: 121 EGEVIDFLMEGENTVRGVRLADESEISASAVVLTSGTFLNGVIHIGNQSKSGGRMGDRPS 180 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIE 239 L FD GRLKTGTP RLDG+TI WD + Q D+ FSFM+ ++ QI Sbjct: 181 IKLAERLKSFDLPLGRLKTGTPPRLDGRTINWDVLDSQPGDDEPTLFSFMSKSVSAPQIA 240 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 CGIT TN TH II +N++ SA+Y G I+ GPRYCPSIEDKIVRF +++ HQIFLEPEG Sbjct: 241 CGITHTNERTHEIIRDNLELSAMYGGHIEGVGPRYCPSIEDKIVRFSDKSSHQIFLEPEG 300 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 ++ VYPNGIST+LPEE+Q ++++I GLE+ +I++PGYAIEYDY++P+ L TLE + Sbjct: 301 VSDHTVYPNGISTSLPEEVQITYVQSIYGLEQASILQPGYAIEYDYVDPRALRSTLELRD 360 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 ISGL+LAGQINGTTGYEEA AQGLVAG+N+A K I F R+ SYIGVMIDDL + G Sbjct: 361 ISGLYLAGQINGTTGYEEAGAQGLVAGLNAASKCRGKGDIIFGRSTSYIGVMIDDLITNG 420 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 V EPYRMFTSRAE+R+SLR DNAD RLTP+ +LGCI R F K + ++S L+ Sbjct: 421 VTEPYRMFTSRAEFRLSLRADNADQRLTPLAKELGCISAERTTAFDKKMAGIEGVKSALE 480 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 +++LT K L + I QDG R+ + L++P+ +++ + P+ + + E++ + Sbjct: 481 AVLLTPKQLVQSGIQVNQDGNKRSGIDVLAFPNVEFEHILPLFPELQATEKEIREQIMRD 540 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 S YA Y RQ E +K +E+ IP +FDY S+ LS EL++KL+ +P +L QA++I+ Sbjct: 541 SLYANYISRQEKEVAALKKDEEYSIPSNFDY-SIDGLSRELQQKLNKSRPESLAQAARID 599 Query: 600 GMTPAALNLLLIYIKK 615 G+TPAAL L+L +K+ Sbjct: 600 GITPAALALILGSLKR 615 >gi|84684648|ref|ZP_01012549.1| glucose-inhibited division protein A [Maritimibacter alkaliphilus HTCC2654] gi|84667627|gb|EAQ14096.1| glucose-inhibited division protein A [Rhodobacterales bacterium HTCC2654] Length = 625 Score = 655 bits (1690), Expect = 0.0, Method: Compositional matrix adjust. Identities = 330/615 (53%), Positives = 435/615 (70%), Gaps = 6/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DV+++GGGHAG EAA +A++GA TAL+T + S +G MSCNPAIGGLGKGHLVREIDAL Sbjct: 9 FDVVIVGGGHAGAEAAVASARIGARTALVTLRASDLGVMSCNPAIGGLGKGHLVREIDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DG+MGR AD AGIQFR+LN KGPAV+GPR QADR+LYR A+ + QE+L V++GEVA Sbjct: 69 DGIMGRAADVAGIQFRLLNRSKGPAVQGPRAQADRKLYRAAVSELVSEQEHLTVVEGEVA 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + +S +++ D S I VVLTTGTFLRGVIHIG ++ GRMGD PS L Sbjct: 129 SLAMSGDKVSGLILSDGSEISARAVVLTTGTFLRGVIHIGDVRWEGGRMGDRPSVRLAEQ 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 GRLKTGTP RLDG+TI W K E Q DE FSF+ K T RQI CGIT T Sbjct: 189 IESLGLPFGRLKTGTPPRLDGRTIDWGKLETQPGDENPEVFSFLNTKPTARQISCGITHT 248 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N TH II N++ SA+Y G I GPRYCPSIEDK+VRF ++ HQIFLEPEGL+ V Sbjct: 249 NERTHEIISRNLERSAMYGGHIDGVGPRYCPSIEDKVVRFSDKPSHQIFLEPEGLDDHTV 308 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YPNGIST+LPE++Q ++ +I GLE I++PGYAIEYDY++P+ L TLE K +SGL+L Sbjct: 309 YPNGISTSLPEDVQQAYVASISGLENARILQPGYAIEYDYVDPRALRLTLELKNVSGLYL 368 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAAAQG+VAG N+AR + + + FSR+ SYIGVMIDDL ++GV EPYR Sbjct: 369 AGQINGTTGYEEAAAQGIVAGFNAARAALDQEEVIFSRSSSYIGVMIDDLVTRGVTEPYR 428 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAE+R++LR DNAD RLTP+ + LG + R++RF++ I++ + +SLLK Sbjct: 429 MFTSRAEFRLALRADNADQRLTPLAIDLGAVSAERKRRFSEKIEKLDAAKSLLKGRSFKP 488 Query: 486 KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIE-RLQI--ESSY 542 + +++ S +DG RT ++ LS P + +L + F+++ ++ R Q+ ++ Y Sbjct: 489 QEVNAAGGSVSEDGTRRTGFDLLSIPGITFASLVKMND---VFATVDLDTRSQVSKDALY 545 Query: 543 AAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMT 602 A Y RQ E + ++ +E ++IP DFDY+ L L+ ELK+KLS ++P L A +IEGMT Sbjct: 546 ARYIERQAREVEALRRDEHQVIPSDFDYAGLDGLTGELKQKLSKVQPETLAHAGRIEGMT 605 Query: 603 PAALNLLLIYIKKNT 617 PAAL L+L ++++ Sbjct: 606 PAALALILAKVRQSA 620 >gi|119382761|ref|YP_913817.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Paracoccus denitrificans PD1222] gi|166222715|sp|A1AXX7|MNMG_PARDP RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|119372528|gb|ABL68121.1| glucose inhibited division protein A [Paracoccus denitrificans PD1222] Length = 619 Score = 655 bits (1690), Expect = 0.0, Method: Compositional matrix adjust. Identities = 319/611 (52%), Positives = 427/611 (69%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DVIVIGGGHAG EAA AA++G TAL+T IG+MSCNPAIGGLGKGHLVREID Sbjct: 2 KQFDVIVIGGGHAGVEAAMAAARMGVKTALVTLHRDDIGTMSCNPAIGGLGKGHLVREID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDG+MG++AD AGIQFR+LN +KGPAV+GPR QADR+LYR A + + Q+ L +I GE Sbjct: 62 ALDGVMGKLADTAGIQFRLLNRRKGPAVQGPRAQADRKLYRSAAAKIVAGQDGLSLILGE 121 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 A E+ ++ + + D+S ++ ++LTTGTFL G+IHIG++ AGR G S S +L Sbjct: 122 AAELLHERGQVTGLRLADDSELQARQIILTTGTFLNGLIHIGEISRQAGRWGGSTSVTLA 181 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 S + GRLKTGTP R+ ++I W+ +Q DE + FS++ Q+ C IT Sbjct: 182 ASLRPLNLPLGRLKTGTPPRILRQSIDWESLHQQPGDEEPVMFSYLNTVPEAPQVSCAIT 241 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +THRII EN+ SA+Y G I GPRYCPSIEDK+VRF ++ HQIFLEPEGL++D Sbjct: 242 HTNPDTHRIIRENLARSAMYGGRIDGVGPRYCPSIEDKVVRFADKESHQIFLEPEGLDSD 301 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +VYPNGIST+LPE+IQ ++R+I GLE+ I +PGYA+EYDY++P+ L +LE K +SGL Sbjct: 302 LVYPNGISTSLPEDIQLAYVRSIRGLERAQIAQPGYAVEYDYVDPRALAASLEVKNLSGL 361 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 FLAGQINGTTGYEEAAAQGLVAG+N+A K+ + + FSR+ SYIGVMIDDLT++GV EP Sbjct: 362 FLAGQINGTTGYEEAAAQGLVAGLNAALKAQGREALHFSRSQSYIGVMIDDLTTRGVSEP 421 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R+SLR DNAD RLTP G+ +GC+G+ R+ F++ ++ Y R +S+ Sbjct: 422 YRMFTSRAEFRLSLRADNADQRLTPFGIDIGCVGQERRAAFSEKMRRYTAARDRAESVSF 481 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 T LS + I + DG R+ + L+ + + ++ +I +L ++ Y Sbjct: 482 TPTELSRSGIEVRHDGARRSLFALLAQQEIPQDQVLALDDQLVLQDPAIIRQLATDALYH 541 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 YT RQ +A+ ++ EE IP +FDY +L LSNELK KL+ +P L A+ IEGMTP Sbjct: 542 QYTDRQGKDAELLRKEEAVAIPAEFDYDALSGLSNELKFKLNQHRPATLAAAANIEGMTP 601 Query: 604 AALNLLLIYIK 614 AAL L+L I+ Sbjct: 602 AALTLILAVIR 612 >gi|91206167|ref|YP_538522.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rickettsia bellii RML369-C] gi|157826531|ref|YP_001495595.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rickettsia bellii OSU 85-389] gi|122425159|sp|Q1RGT1|MNMG_RICBR RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|166199727|sp|A8GUR1|MNMG_RICB8 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|91069711|gb|ABE05433.1| Glucose-inhibited division protein A [Rickettsia bellii RML369-C] gi|157801835|gb|ABV78558.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rickettsia bellii OSU 85-389] Length = 621 Score = 655 bits (1690), Expect = 0.0, Method: Compositional matrix adjust. Identities = 320/611 (52%), Positives = 428/611 (70%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIGGGHAG EAAA +A+LG ST LIT K+ +G MSCNPAIGG+ KG LV+EID Sbjct: 2 QKYDVIVIGGGHAGVEAAAASARLGVSTLLITPKSENLGEMSCNPAIGGIAKGTLVKEID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDGLMG V D AGI +++LN +GPAV GPR QADR+LY+ AM + + + NL+++ + Sbjct: 62 ALDGLMGYVIDQAGIHYKMLNETRGPAVWGPRAQADRKLYKKAMYQILTNYPNLEILYAK 121 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + + I ++++ + S I C ++LTTGTFL G+IHIG KIPAGR+ + PS L Sbjct: 122 VEDIEIKSSEIKAVILNNGSKIPCQKIILTTGTFLSGLIHIGSKKIPAGRVDEEPSYGLS 181 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 N+ + F RLKTGTP R+DG+TI + K E Q D+ PFS +TD + QI C +T Sbjct: 182 NTLRRIGFKLSRLKTGTPPRIDGRTIDYSKVESQPGDKVPRPFSELTDNVNVPQINCFVT 241 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 +T ETH +I N+ SA+YSG I+ GPRYCPSIEDKIVRF ++ H+IFLEPEG++ Sbjct: 242 KTTTETHNVIRANLDKSAMYSGQIEGIGPRYCPSIEDKIVRFSTKSEHRIFLEPEGVDDH 301 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LPEE+QHQ I+TIPGLE I+RPGYAIEYDYI+P+E+ TLETKKI+GL Sbjct: 302 TIYPNGISTSLPEEVQHQLIKTIPGLENAIILRPGYAIEYDYIDPREISSTLETKKITGL 361 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGTTGYEEAA QG+VAGIN+A +R +SYIGVMIDDLTS G LEP Sbjct: 362 YFAGQINGTTGYEEAAGQGIVAGINAALAVKNQPPFILTRANSYIGVMIDDLTSFGTLEP 421 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSR+EYR+S+R DNAD RLT +G+ +G I E+R++ F + +SLL +L L Sbjct: 422 YRMFTSRSEYRLSIRADNADLRLTEMGISIGVISEKRKEIFTIKCKNIESTKSLLNTLCL 481 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 T+ L+ I QDG +T + P+F ++ I P + + +++ L IE+ YA Sbjct: 482 TTSKLAKMGIQVAQDGTYKTVLDLFKIPNFDVEQAIKIFPVLKNVDNNILQLLYIEAKYA 541 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 +Y RQ + + EE +LIPK+ DY +P++S E++EKLS KP ++ A +I G+TP Sbjct: 542 SYLVRQYADINLFQSEEAQLIPKNIDYFKIPSISLEIQEKLSYNKPITIVAARRIPGVTP 601 Query: 604 AALNLLLIYIK 614 AA+ ++IY+K Sbjct: 602 AAITAIIIYLK 612 >gi|302381484|ref|YP_003817307.1| glucose inhibited division protein A [Brevundimonas subvibrioides ATCC 15264] gi|302192112|gb|ADK99683.1| glucose inhibited division protein A [Brevundimonas subvibrioides ATCC 15264] Length = 641 Score = 655 bits (1689), Expect = 0.0, Method: Compositional matrix adjust. Identities = 319/614 (51%), Positives = 415/614 (67%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 S+DVIVIGGGHAGCEAAA +A+ GA T L+T K T+G MSCNPAIGGLGKGHLVREIDA Sbjct: 26 SFDVIVIGGGHAGCEAAAASARTGARTLLLTQKLETVGEMSCNPAIGGLGKGHLVREIDA 85 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGR+AD +GIQFR+LN KG AVRGPR+Q DR LYR AMQ E+ NL ++ G Sbjct: 86 LDGLMGRLADVSGIQFRMLNRSKGAAVRGPRSQIDRRLYREAMQAELAGTPNLTLMAGTA 145 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + + + + +R VVLTTGTFL GVIH G ++ PAGR G++PS L Sbjct: 146 EALMLNGDRVVGVTTGEGLDLRAGAVVLTTGTFLNGVIHQGDVRTPAGRHGEAPSTGLAR 205 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 GRLKTGTPARLDG+TI WD+ E Q AD +PFSF+TD+I+ QI CGIT+ Sbjct: 206 DLYGAGLKMGRLKTGTPARLDGRTIGWDRLEMQAADAEPVPFSFLTDRISVPQIACGITQ 265 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T +TH II N+ SA+Y G + GPRYCPSIEDK+VRF ++ HQ+FLEPEGL+ Sbjct: 266 TTEQTHAIIAANLGESAVYGGHLTGRGPRYCPSIEDKVVRFADKTSHQVFLEPEGLDDPT 325 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST++ E Q F+RT+PGLE V + R GYAIEYDY++P+EL LE K+ GL+ Sbjct: 326 VYPNGISTSVSPETQMAFLRTMPGLEAVEVFRFGYAIEYDYVDPRELTSALEVKRRPGLY 385 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEA AQGL+AG+N+AR + I R +YIGVMIDDL ++GV EPY Sbjct: 386 LAGQINGTTGYEEAGAQGLIAGLNAARAAAGSPEIVLGRDQAYIGVMIDDLVTRGVTEPY 445 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR++LR DNAD RLTP+G+ G + R+ F +L++ T Sbjct: 446 RMFTSRAEYRLTLRADNADQRLTPVGIGAGIVCGARRAAFEAKADTLAEATALVRDTRFT 505 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + I+ DG+ R+ + L+YP + + P + + E+++I++ YA Sbjct: 506 PNEAQALGIAVNADGQRRSMRDLLAYPGVDLTQFETAWPIIGSWPVAIREQVEIDAGYAG 565 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ EA+ ++ EE +P DY+++ LSNE++EKLS+++P L QA +IEG+TP Sbjct: 566 YLDRQTAEAEALRREEALTLPASLDYAAIGGLSNEVREKLSLVQPRTLGQAGRIEGVTPG 625 Query: 605 ALNLLLIYIKKNTV 618 AL LL ++K+ +V Sbjct: 626 ALTALLSHVKRTSV 639 >gi|56694929|ref|YP_165274.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ruegeria pomeroyi DSS-3] gi|81170578|sp|Q5LWF3|MNMG_SILPO RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|56676666|gb|AAV93332.1| glucose inhibited division protein A [Ruegeria pomeroyi DSS-3] Length = 622 Score = 655 bits (1689), Expect = 0.0, Method: Compositional matrix adjust. Identities = 320/603 (53%), Positives = 428/603 (70%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M + +D++VIG GHAG EAA AA++G TAL++ IG MSCNPAIGGLGKGHLVR Sbjct: 1 MKHSDFDIVVIGAGHAGAEAAHAAARMGMRTALVSLSERDIGVMSCNPAIGGLGKGHLVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDALDG+MGRVAD AGIQFR+LN +KGPAV+GPR QADR+LYRLAMQ E+ ++ L ++ Sbjct: 61 EIDALDGVMGRVADKAGIQFRLLNRRKGPAVQGPRAQADRKLYRLAMQEEMRNRPGLTIV 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 +GEV F + + ++ +V+ D S I V+LT+GTFLRG+IHIG + P GRMGD PS Sbjct: 121 EGEVTDFRMQGDRVAGVVLADGSEIASQAVILTSGTFLRGIIHIGDVSRPGGRMGDRPSV 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 L F GRLKTGTP RLDG+TI W E+Q D+ + FSF++ RQI C Sbjct: 181 PLAERLDGFALPMGRLKTGTPPRLDGRTIDWSILERQDGDDDPVLFSFLSKGAYARQIAC 240 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 GIT TN +TH II +N+ SA+Y G I+ GPRYCPSIEDKIVRF +++ HQIFLEPEGL Sbjct: 241 GITHTNAQTHEIIRKNLSRSAMYGGHIEGVGPRYCPSIEDKIVRFADKDSHQIFLEPEGL 300 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 VYPNGIST+LP ++Q ++R+I GLE+V I++PGYAIEYDY++P+ L L + Sbjct: 301 EDHTVYPNGISTSLPVDVQEDYVRSIRGLEQVEILQPGYAIEYDYVDPRALTSQLSLPNV 360 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GL+LAGQINGTTGYEEAAAQG+VAG+N+A + + FSR +SYIGVMIDDLT++GV Sbjct: 361 PGLYLAGQINGTTGYEEAAAQGMVAGLNAATAILGHEPVPFSRANSYIGVMIDDLTTRGV 420 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAE+R+SLR DNAD RLTP+G++LGC+G+ R+ FA+ ++ +LL Sbjct: 421 AEPYRMFTSRAEFRLSLRADNADQRLTPLGLELGCVGDERRDVFARKAEKLATASALLDQ 480 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + K +++ I+ QDG R + L++PD +L + P+ + +++ ++ Sbjct: 481 SSFSPKEIATAGITISQDGNRRNGFAVLAFPDVRFDDLVPLIPELADTDAETRAQVERDA 540 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 YA Y RQ + + +K +E +IP DF++S+L LSNELK+KL+ +P N+ QA ++EG Sbjct: 541 LYANYIARQERDVEAMKRDEALVIPIDFNFSALDGLSNELKQKLTSARPENIAQAGRVEG 600 Query: 601 MTP 603 MTP Sbjct: 601 MTP 603 >gi|170750484|ref|YP_001756744.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Methylobacterium radiotolerans JCM 2831] gi|205831534|sp|B1M186|MNMG_METRJ RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|170657006|gb|ACB26061.1| glucose inhibited division protein A [Methylobacterium radiotolerans JCM 2831] Length = 633 Score = 654 bits (1687), Expect = 0.0, Method: Compositional matrix adjust. Identities = 314/573 (54%), Positives = 405/573 (70%), Gaps = 3/573 (0%) Query: 33 LITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVR 92 L+TH +TIG+MSCNPAIGGLGKGHLVRE+DALDGLMGRVADAAGIQFR+LN +KGPAVR Sbjct: 36 LVTHDPATIGAMSCNPAIGGLGKGHLVREVDALDGLMGRVADAAGIQFRLLNRRKGPAVR 95 Query: 93 GPRTQADRELYRLAMQREILSQENLDVIQG--EVAGFNTEKNIISSIVMQDNSMIRCSTV 150 GPRTQADR+LY AMQ + L V+ G E F+ E + +V+ D + C V Sbjct: 96 GPRTQADRKLYAAAMQTAVAETAGLTVVAGACEDLAFDAEGRL-CGLVLADGRTLACGAV 154 Query: 151 VLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTII 210 VLTTGTFLRG+IHIG+ +IPAGR+G++P+ L + + GRLKTGTP RLDG+TI Sbjct: 155 VLTTGTFLRGLIHIGERQIPAGRVGEAPAVGLAQTLERLGLRLGRLKTGTPPRLDGRTID 214 Query: 211 WDKTEKQFADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSY 270 W E Q AD +PFS +T++ITN QI CGITRT H +I N+ S +YSG I S Sbjct: 215 WSGLEMQEADAEPVPFSTLTERITNPQIRCGITRTTRAVHDLIRANLHRSPMYSGGIASR 274 Query: 271 GPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLE 330 GPRYCPSIEDK+VRFG+R GHQIFLEPEGL+ +YPNGISTALPE +Q +R IPGLE Sbjct: 275 GPRYCPSIEDKVVRFGDREGHQIFLEPEGLDDPTIYPNGISTALPEAVQRDLVRLIPGLE 334 Query: 331 KVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSA 390 +V I+RPGYAIEYDY++P+EL L+ K++ GLFLAGQINGTTGYEEAA QGLVAG+N+A Sbjct: 335 RVEILRPGYAIEYDYVDPRELDLGLQVKRLPGLFLAGQINGTTGYEEAAGQGLVAGLNAA 394 Query: 391 RKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIG 450 R + L F R +SY+GVMIDDL ++GV EPYRMFTSR+EYR+SLR DNAD RLTP G Sbjct: 395 RHAGGLGIAGFDRAESYLGVMIDDLVTQGVSEPYRMFTSRSEYRLSLRVDNADARLTPRG 454 Query: 451 MKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSY 510 + LGC+G R +FA R+ L ++ LT + IS +DG RT ++ L+Y Sbjct: 455 IALGCVGGHRAAQFAAGQAALGAARARLDAVSLTPSQAAPHGISLNRDGIRRTGFQLLAY 514 Query: 511 PDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDY 570 P+ +L ++ PD + + +R++ +++YA Y RQ + + +E +P DY Sbjct: 515 PEIGWADLAAVWPDLAEVPPRIADRMKTDATYAVYLDRQNADIAAFRRDEAVRLPPGLDY 574 Query: 571 SSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 +++ LSNE++ KL ++P L QA++IEG+TP Sbjct: 575 AAISGLSNEMRVKLETVRPGTLGQAARIEGVTP 607 >gi|126738504|ref|ZP_01754209.1| glucose-inhibited division protein A [Roseobacter sp. SK209-2-6] gi|126720303|gb|EBA17009.1| glucose-inhibited division protein A [Roseobacter sp. SK209-2-6] Length = 581 Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust. Identities = 319/573 (55%), Positives = 402/573 (70%) Query: 44 MSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELY 103 MSCNPAIGGLGKGHLVREIDA+DG+MGRVAD AGIQFR+LN +KGPAV+GPR Q+DR +Y Sbjct: 1 MSCNPAIGGLGKGHLVREIDAMDGVMGRVADLAGIQFRLLNRRKGPAVQGPRAQSDRSVY 60 Query: 104 RLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIH 163 R M RE +Q+NL +I+GE F + +S +V+ DNS I V+LT+GTFLRGVIH Sbjct: 61 RSEMLRETKAQKNLTIIEGEATDFVMKGTTVSGVVLADNSEISAGAVILTSGTFLRGVIH 120 Query: 164 IGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERL 223 IG GRMGD PS L F+ GRLKTGTP RLDG+TI WD EKQ DE Sbjct: 121 IGDSSHSGGRMGDRPSIKLAEKLQSFELPLGRLKTGTPPRLDGRTINWDILEKQPGDEDP 180 Query: 224 IPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIV 283 + FSF T K+ Q++CGIT TN +TH II EN+ SA+Y G I GPRYCPSIEDKIV Sbjct: 181 VFFSFQTQKLNIPQVDCGITHTNEKTHEIIRENLSRSAMYGGHIDGIGPRYCPSIEDKIV 240 Query: 284 RFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEY 343 RF E+N HQIFLEPEG+ VYPNGIST+LP ++Q ++R+I GLE I++ GYAIEY Sbjct: 241 RFAEKNSHQIFLEPEGVRDSTVYPNGISTSLPVDVQEDYVRSIIGLEAAKILQSGYAIEY 300 Query: 344 DYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSR 403 DY++P+ L LE K + GL+LAGQINGTTGYEEAAAQGLVAG+N+ARK + D I FSR Sbjct: 301 DYVDPRALTLELELKDVPGLYLAGQINGTTGYEEAAAQGLVAGVNAARKVLEKDPIIFSR 360 Query: 404 TDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKR 463 +SYIGVMIDDLT+ GV EPYRMFTSRAE+R+SLR DNAD RLTP G +GCI E R K Sbjct: 361 ANSYIGVMIDDLTTNGVTEPYRMFTSRAEFRLSLRADNADQRLTPEGHSIGCISEERWKA 420 Query: 464 FAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICP 523 F+ ++ + R L+ T K +SS I QDGK RT +E L +P+ S ++ ++ P Sbjct: 421 FSAKSEKLDTARRHLEGNRFTPKQVSSAGIHVNQDGKKRTGFEVLGFPNVSFNDVANLVP 480 Query: 524 DARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEK 583 + + ++L+ ++ Y+ Y RQ E +K +E IP+DFDYS + LS EL +K Sbjct: 481 EVLSTEPEIQKQLERDALYSNYIVRQEREIAAMKKDEGHKIPRDFDYSLIEGLSAELIQK 540 Query: 584 LSILKPFNLLQASKIEGMTPAALNLLLIYIKKN 616 L+ +P L +AS+I GMTPA L L+L +++N Sbjct: 541 LTAARPETLAKASRINGMTPAGLALVLARLRRN 573 >gi|316931725|ref|YP_004106707.1| glucose inhibited division protein A [Rhodopseudomonas palustris DX-1] gi|315599439|gb|ADU41974.1| glucose inhibited division protein A [Rhodopseudomonas palustris DX-1] Length = 622 Score = 653 bits (1684), Expect = 0.0, Method: Compositional matrix adjust. Identities = 335/615 (54%), Positives = 439/615 (71%), Gaps = 1/615 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 S+DVIVIGGGHAGCEAAA AA++GA+TAL+TH+ +TIG+MSCNPAIGGLGKGHLVRE+DA Sbjct: 4 SFDVIVIGGGHAGCEAAAAAARIGAATALVTHRYATIGAMSCNPAIGGLGKGHLVREVDA 63 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRVADA GIQFR+LN +KGPAVRGPR QADR+LY AMQ I + NL VI+GE Sbjct: 64 LDGLMGRVADAGGIQFRMLNRRKGPAVRGPRAQADRKLYAAAMQTAIFATPNLSVIEGEA 123 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 ++ I + D + + VV+TTGTFLRG+IH+G+ PAGR+ ++P+ L Sbjct: 124 DVLLWRDGRVTGIRLGDGRELAAAAVVITTGTFLRGLIHLGERSWPAGRIDEAPAMGLSG 183 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 SF F GRLKTGTPARLDG+TI W E Q D+ PFS +T IT QIECGITR Sbjct: 184 SFEALGFTLGRLKTGTPARLDGRTIDWGAVEMQPGDDPPEPFSVLTPAITTPQIECGITR 243 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T TH +I N+ S +YSG I+S GPRYCPSIEDKIV+FG+R+GHQIFLEPEGL+ Sbjct: 244 TTPATHEVIRANVHRSPMYSGQIQSTGPRYCPSIEDKIVKFGDRDGHQIFLEPEGLDDPT 303 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LPEE+Q ++TIPGLE+ + RPGYAIEYD+++P+EL PTL+T+++ GLF Sbjct: 304 VYPNGISTSLPEEVQRAILKTIPGLEQTEMFRPGYAIEYDHVDPRELEPTLQTRRLRGLF 363 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEAAAQGLVAG+N+A + D F R D Y+GVMIDDL ++G+ EPY Sbjct: 364 LAGQINGTTGYEEAAAQGLVAGLNAALAAGGGDQAVFDRADGYLGVMIDDLVTRGIAEPY 423 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR++LR DNAD RLT G+ LGC+GE R + R+L +SL +T Sbjct: 424 RMFTSRAEYRLTLRADNADQRLTDKGVSLGCVGEERSAFHRGKMAALFEARALAQSLAIT 483 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + ++ +DG+ R+A++ LSYP+ + +I P+ K ++ ++I++ Y Sbjct: 484 PNEAAKYGLALNRDGQRRSAFDLLSYPEIDWAQVRAIWPELGKVDPVIATHVEIDAKYHV 543 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + + + +E L D DY+++P LSNE + +L +P + QA +++G+TPA Sbjct: 544 YLERQTADVEAFRRDES-LRLTDVDYAAVPGLSNEARTRLERHRPHTVGQAGRLDGITPA 602 Query: 605 ALNLLLIYIKKNTVK 619 AL +L Y+++ K Sbjct: 603 ALGILAAYLRREERK 617 >gi|90421814|ref|YP_530184.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rhodopseudomonas palustris BisB18] gi|122477630|sp|Q21CM1|MNMG_RHOPB RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|90103828|gb|ABD85865.1| glucose inhibited division protein A [Rhodopseudomonas palustris BisB18] Length = 625 Score = 651 bits (1680), Expect = 0.0, Method: Compositional matrix adjust. Identities = 332/615 (53%), Positives = 440/615 (71%), Gaps = 1/615 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + S+DVIVIGGGHAGCEAAA AA+LGA+TAL+TH+ +T+G+MSCNPAIGGLGKGHLVRE Sbjct: 1 MQTSFDVIVIGGGHAGCEAAAAAARLGATTALVTHRFATVGAMSCNPAIGGLGKGHLVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DALDGLMGRVAD GIQFR+LN +KGPAVRGPR QADR+LY AMQ IL+ +L V++ Sbjct: 61 VDALDGLMGRVADQGGIQFRMLNRRKGPAVRGPRAQADRKLYAAAMQALILATPHLSVVE 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 E T I+ I + D + VV+TTGTFLRG+IH+G+ PAGR+ ++P+ Sbjct: 121 AEADDLLTSDGRITGIRLADGRELGAGAVVITTGTFLRGLIHLGERSWPAGRIDEAPALG 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L SF + F GRLKTGTP RLDG++I W E Q DE PFS +T+KITN QIECG Sbjct: 181 LSKSFERLGFALGRLKTGTPPRLDGRSIDWGAVEMQPGDEPPEPFSVLTEKITNPQIECG 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 ITRT TH +I N+ S +YSG I+S GPRYCPSIEDKIVRFG+R+GHQIFLEPEGL+ Sbjct: 241 ITRTTPATHAVIRANVHRSPMYSGQIQSSGPRYCPSIEDKIVRFGDRDGHQIFLEPEGLD 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 VYPNGIST+LPEE+Q + TIPGL++ ++RPGYAIEYD+++P+EL PTL+ K++ Sbjct: 301 DPTVYPNGISTSLPEEVQRAILATIPGLQRTTMLRPGYAIEYDHVDPRELEPTLQAKRLR 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLFLAGQINGTTGYEEAAAQGLVAG+N+A ++ I F R D Y+GVMIDDL ++G+ Sbjct: 361 GLFLAGQINGTTGYEEAAAQGLVAGLNAALLASGGGEIAFDRADGYLGVMIDDLVTRGIT 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR++LR DNAD RLT G+ LGC+G R + + ++L +SL Sbjct: 421 EPYRMFTSRAEYRLTLRADNADQRLTGQGIALGCVGAERTEFHTAKMAALAQAKALAQSL 480 Query: 482 VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +T + +S +DG R+A+E L+YP+ + +I P+ + L+I+++ Sbjct: 481 AITPSQAAKHGLSLNRDGVRRSAFELLAYPEVDWARVEAIWPELAAIEPSIATHLEIDAT 540 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y RQ + + + +E L+ + DY+ +P LSNE + +L +P + QA +++G+ Sbjct: 541 YDVYLKRQTADVEGFRRDEGLLL-TEIDYALVPGLSNEARGRLEKARPRTVGQAGRLDGL 599 Query: 602 TPAALNLLLIYIKKN 616 TPAAL +L Y++++ Sbjct: 600 TPAALGILAAYLRRD 614 >gi|157827958|ref|YP_001494200.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rickettsia rickettsii str. 'Sheila Smith'] gi|165932646|ref|YP_001649435.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rickettsia rickettsii str. Iowa] gi|166200609|sp|A8GQL7|MNMG_RICRS RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|189039353|sp|B0BW03|MNMG_RICRO RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|157800439|gb|ABV75692.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rickettsia rickettsii str. 'Sheila Smith'] gi|165907733|gb|ABY72029.1| glucose inhibited division protein A [Rickettsia rickettsii str. Iowa] Length = 622 Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust. Identities = 320/610 (52%), Positives = 434/610 (71%), Gaps = 1/610 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAG EAAA +A+LG T LIT K +G MSCNPAIGG+ KG LV+EIDAL Sbjct: 4 YDVIVIGGGHAGVEAAAASARLGVPTLLITLKPENLGEMSCNPAIGGIAKGTLVKEIDAL 63 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGLMG V D AGI +++LN +GPAV GPR QADR+LY+ AM + + + NLD++ G+V Sbjct: 64 DGLMGYVIDQAGIHYKMLNETRGPAVWGPRAQADRKLYKKAMYQILTNYPNLDILYGKVE 123 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + + I ++++ + S I C ++LTTGTFL G+IHIG+ KIPAGR+ + PS L N+ Sbjct: 124 DIEIKSSKIEAVILNNGSKILCQKIILTTGTFLSGLIHIGQKKIPAGRVDEEPSYGLSNT 183 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + F RLKTGTP R+DG+TI + KT Q D+ PFS +T+ + QI C IT+T Sbjct: 184 LKQIGFKLARLKTGTPPRIDGRTIDYSKTILQPGDKIPRPFSELTNIVNVSQINCFITKT 243 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 ETH II EN+ SA+YSG I+ GPRYCPSIEDKIVRF ++ H+IFLEPEGL+ + Sbjct: 244 TSETHDIIRENLDKSAMYSGQIEGIGPRYCPSIEDKIVRFSTKSEHRIFLEPEGLDDYTI 303 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YPNGIST+LPE++QH+ I+TIPGLE V ++RPGYAIEYDY++P+E+ TLETKKI+GL+L Sbjct: 304 YPNGISTSLPEDVQHKLIKTIPGLENVKVLRPGYAIEYDYVDPREISVTLETKKIAGLYL 363 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAA QG++AGIN+A +R +SYIGVMIDDLT+ G +EPYR Sbjct: 364 AGQINGTTGYEEAAGQGIIAGINAALAVKDQAPFMLTRANSYIGVMIDDLTTFGTIEPYR 423 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSR+EYR+SLR DN+D RLT +GM +G + E+R+K F K ++ ++SLL +L LT+ Sbjct: 424 MFTSRSEYRLSLRADNSDLRLTELGMNIGVVSEKRKKIFTKKCEDIEKIKSLLNTLSLTT 483 Query: 486 KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIESSYAA 544 L+ I QDG +T + P+F+++ I P ++ ++ +++ L IE+ YA+ Sbjct: 484 SKLAKMGIQVAQDGTYKTVLDLFKIPNFNVEQAIKIFPMLKETQNNNILQLLYIEAKYAS 543 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + + EE + IPK+ DY +P++S E++EKLS KP + A +I G+TPA Sbjct: 544 YLTRQQADINLFQSEEAQFIPKNIDYFKIPSISLEIQEKLSAHKPTTIGVARRIPGITPA 603 Query: 605 ALNLLLIYIK 614 A+ ++IY+K Sbjct: 604 AITAIIIYLK 613 >gi|229586296|ref|YP_002844797.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rickettsia africae ESF-5] gi|259495851|sp|C3PM94|MNMG_RICAE RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|228021346|gb|ACP53054.1| Glucose-inhibited division protein A [Rickettsia africae ESF-5] Length = 622 Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust. Identities = 320/610 (52%), Positives = 433/610 (70%), Gaps = 1/610 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAG EAAA +A+LG T LIT K +G MSCNPAIGG+ KG LV+EIDAL Sbjct: 4 YDVIVIGGGHAGVEAAAASARLGVPTLLITLKPENLGEMSCNPAIGGIAKGTLVKEIDAL 63 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGLMG V D AGI +++LN +GPAV GPR QADR+LY+ AM + + + NLD++ G+V Sbjct: 64 DGLMGYVIDQAGIHYKMLNETRGPAVWGPRAQADRKLYKKAMYQILTNYPNLDILYGKVE 123 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + + I ++++ + S I C ++LTTGTFL G+IHIG+ KIPAGR+ + PS L N+ Sbjct: 124 DIEIKSSKIEAVILNNGSKILCQKIILTTGTFLSGLIHIGQKKIPAGRVDEEPSYGLSNT 183 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + F RLKTGTP R+DG+TI + KT Q D+ PFS +T+ + QI C IT+T Sbjct: 184 LKQIGFKLARLKTGTPPRIDGRTIDYSKTILQPGDKIPRPFSELTNIVNVSQINCFITKT 243 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 ETH II EN+ SA+YSG I+ GPRYCPSIEDKIVRF ++ H+IFLEPEGL+ + Sbjct: 244 TSETHDIIRENLDKSAMYSGQIEGIGPRYCPSIEDKIVRFSTKSEHRIFLEPEGLDDYTI 303 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YPNGIST+LPE++QH+ I+TIPGLE V ++RPGYAIEYDY++P+E+ TLETKKI+GL+L Sbjct: 304 YPNGISTSLPEDVQHKLIKTIPGLENVKVLRPGYAIEYDYVDPREISVTLETKKIAGLYL 363 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAA QG++AGIN+A +R +SYIGVMIDDLT+ G +EPYR Sbjct: 364 AGQINGTTGYEEAAGQGIIAGINAALAVKDQAPFMLTRANSYIGVMIDDLTTFGTIEPYR 423 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSR+EYR+SLR DN+D RLT +GM +G + E+R+K F K ++ ++SLL +L LT+ Sbjct: 424 MFTSRSEYRLSLRADNSDLRLTELGMNIGVVSEKRKKIFTKKCEDIEKIKSLLNTLSLTT 483 Query: 486 KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VIERLQIESSYAA 544 L+ I QDG +T + P+F+++ I P ++ + +++ L IE+ YA+ Sbjct: 484 SKLAKMGIQVAQDGTYKTVLDLFKIPNFNVEQAIKIFPMLKETQNKNILQLLYIEAKYAS 543 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + + EE + IPK+ DY +P++S E++EKLS KP + A +I G+TPA Sbjct: 544 YLTRQHADINLFQSEEAQFIPKNIDYFKIPSISLEIQEKLSSHKPTTIGVARRIPGITPA 603 Query: 605 ALNLLLIYIK 614 A+ ++IY+K Sbjct: 604 AITAIIIYLK 613 >gi|157964122|ref|YP_001498946.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rickettsia massiliae MTU5] gi|166989739|sp|A8F0G3|MNMG_RICM5 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|157843898|gb|ABV84399.1| Glucose-inhibited division protein A [Rickettsia massiliae MTU5] Length = 622 Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust. Identities = 320/610 (52%), Positives = 434/610 (71%), Gaps = 1/610 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAG EAAA +A+LG T LIT K +G MSCNPAIGG+ KG LV+EIDAL Sbjct: 4 YDVIVIGGGHAGVEAAAASARLGVPTLLITLKPENLGEMSCNPAIGGIAKGTLVKEIDAL 63 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGLMG V D AGI +++LN +GPAV GPR QADR+LY+ AM + + + NLD++ G+V Sbjct: 64 DGLMGYVIDQAGIHYKMLNETRGPAVWGPRAQADRKLYKKAMYQILTNYPNLDILYGKVE 123 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + + I ++++ + S I C ++LTTGTFL G+IHIG+ KIPAGR+ + PS L N+ Sbjct: 124 DIEIKSSKIEAVILNNGSKILCQKIILTTGTFLSGLIHIGQKKIPAGRVDEEPSYGLSNT 183 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + F RLKTGTP R+DG+TI + KT Q D+ PFS +T+ + QI C IT+T Sbjct: 184 LKQIGFKLARLKTGTPPRIDGRTIDYSKTILQPGDKIPRPFSELTNIVNVSQINCFITKT 243 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 ETH II EN+ SA+YSG I+ GPRYCPSIEDKIVRF ++ H+IFLEPEGL+ + Sbjct: 244 TSETHDIIRENLDKSAMYSGQIEGIGPRYCPSIEDKIVRFSTKSEHRIFLEPEGLDDYTI 303 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YPNGIST+LPE++QH+ I+TIPGLE V ++RPGYAIEYDY++P+E+ TLETKKI+GL+ Sbjct: 304 YPNGISTSLPEDVQHKLIKTIPGLENVKVLRPGYAIEYDYVDPREISVTLETKKIAGLYF 363 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAA QG++AGIN+A +R +SYIGVMIDDLT+ G +EPYR Sbjct: 364 AGQINGTTGYEEAAGQGIIAGINAALAVKDQAPFMLTRANSYIGVMIDDLTTFGTIEPYR 423 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSR+EYR+SLR DN+D RLT +GM +G + E+R+K F K ++ ++SLL +L LT+ Sbjct: 424 MFTSRSEYRLSLRADNSDLRLTELGMNIGVVSEKRKKIFTKKCEDIEKIKSLLNTLSLTT 483 Query: 486 KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIESSYAA 544 L+ I QDG +T + P+F+++ I P ++ ++ +++ L IE+ YA+ Sbjct: 484 SKLAKMGIQVAQDGTYKTVLDLFKIPNFNVEQAIKIFPMLKETQNNNILQLLYIEAKYAS 543 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + + EE +LIPK+ DY +P++S E++EKLS KP + A +I G+TPA Sbjct: 544 YLTRQHADINLFQSEEAQLIPKNIDYFKIPSISLEIQEKLSSHKPTTIGVARRIPGITPA 603 Query: 605 ALNLLLIYIK 614 A+ ++IY+K Sbjct: 604 AITAIIIYLK 613 >gi|34580957|ref|ZP_00142437.1| glucose inhibited division protein A [Rickettsia sibirica 246] gi|28262342|gb|EAA25846.1| glucose inhibited division protein A [Rickettsia sibirica 246] Length = 622 Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust. Identities = 320/610 (52%), Positives = 434/610 (71%), Gaps = 1/610 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAG EAAA +A+LG T LIT K +G MSCNPAIGG+ KG LV+EIDAL Sbjct: 4 YDVIVIGGGHAGVEAAAASARLGVPTLLITLKPENLGEMSCNPAIGGIAKGTLVKEIDAL 63 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGLMG V D AGI +++LN +GPAV GPR QADR+LY+ AM + + + NLD++ G+V Sbjct: 64 DGLMGYVIDQAGIHYKMLNETRGPAVWGPRAQADRKLYKKAMYQILTNYPNLDILYGKVE 123 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + + I ++++ + S I C ++LTTGTFL G+IHIG+ KIPAGR+ + PS L N+ Sbjct: 124 DIEIKSSKIEAVILNNGSKILCQKIILTTGTFLSGLIHIGQKKIPAGRVDEEPSYGLSNT 183 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + F RLKTGTP R+DG+TI + KT Q D+ PFS +T+ + QI C IT+T Sbjct: 184 LKQIGFKLARLKTGTPPRIDGRTIDYSKTILQPGDKIPRPFSELTNIVNVSQINCFITKT 243 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 ETH II EN+ SA+YSG I+ GPRYCPSIEDKIVRF ++ H+IFLEPEGL+ + Sbjct: 244 TSETHDIIRENLDKSAMYSGQIEGIGPRYCPSIEDKIVRFSTKSEHRIFLEPEGLDDYTI 303 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YPNGIST+LPE++QH+ I+TIPGLE V ++RPGYAIEYDY++P+E+ TLETKKI+GL+L Sbjct: 304 YPNGISTSLPEDVQHKLIKTIPGLENVKVLRPGYAIEYDYVDPREISVTLETKKIAGLYL 363 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAA QG++AGIN+A +R +SYIGVMIDDLT+ G +EPYR Sbjct: 364 AGQINGTTGYEEAAGQGIIAGINAALAVKDQAPFMLTRANSYIGVMIDDLTTFGTIEPYR 423 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSR+EYR+SLR DN+D RLT +GM +G + E+R+K F K ++ ++SLL +L LT+ Sbjct: 424 MFTSRSEYRLSLRADNSDLRLTELGMNIGVVSEKRKKIFTKKCEDIEKIKSLLNTLSLTT 483 Query: 486 KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIESSYAA 544 L+ I QDG +T + P+F+++ I P ++ ++ +++ L IE+ YA+ Sbjct: 484 SKLAKMGIQVAQDGTYKTVLDLFKIPNFNVEQAIKIFPMLKETQNNNILQLLYIEAKYAS 543 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + + EE + IPK+ DY +P++S E++EKLS KP + A +I G+TPA Sbjct: 544 YLTRQHADINLFQSEEAQFIPKNIDYFKIPSISLEIQEKLSSHKPTTIGVARRIPGITPA 603 Query: 605 ALNLLLIYIK 614 A+ ++IY+K Sbjct: 604 AITAIIIYLK 613 >gi|84501194|ref|ZP_00999399.1| glucose-inhibited division protein A [Oceanicola batsensis HTCC2597] gi|84390485|gb|EAQ02973.1| glucose-inhibited division protein A [Oceanicola batsensis HTCC2597] Length = 596 Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust. Identities = 312/577 (54%), Positives = 401/577 (69%) Query: 27 LGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVK 86 +GA TAL+T + IG MSCNPAIGGLGKGHLVREIDA+DG+MGR+AD AGIQFR+LN + Sbjct: 1 MGARTALVTLRKDGIGVMSCNPAIGGLGKGHLVREIDAMDGVMGRIADRAGIQFRLLNRR 60 Query: 87 KGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIR 146 KGPAV+GPR Q+DR++YR AM E+ NL +++ EV F +S + + + Sbjct: 61 KGPAVQGPRAQSDRKIYRTAMLAELEGTPNLTILEDEVTDFVMNGGQVSGVALNGADTLT 120 Query: 147 CSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDG 206 VLTTGTFLRGVIHIG + P GRMGD PS L F GRLKTGTP RLDG Sbjct: 121 AGATVLTTGTFLRGVIHIGDVSRPGGRMGDRPSVRLAERIDDFGLPLGRLKTGTPPRLDG 180 Query: 207 KTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGD 266 +TI WD E+Q D+ + FSF++ K+ Q+ CGIT TN ETH II N+ SA+Y G Sbjct: 181 RTINWDVLEEQPGDDTPVLFSFLSSKVMAPQVSCGITHTNEETHEIIRANLNRSAMYGGH 240 Query: 267 IKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTI 326 I GPRYCPSIEDK+VRF E+ HQIFLEPEG + VYPNGIST+LP+++Q ++ +I Sbjct: 241 IDGVGPRYCPSIEDKVVRFAEKTSHQIFLEPEGADDPTVYPNGISTSLPQDVQEDYVHSI 300 Query: 327 PGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAG 386 GLE+ I++PGYAIEYDY++P+ L L+ K + GLFLAGQINGTTGYEEAAAQGLVAG Sbjct: 301 RGLEQTEIVQPGYAIEYDYVDPRVLDLRLQLKSVPGLFLAGQINGTTGYEEAAAQGLVAG 360 Query: 387 INSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRL 446 +N+A S D + FSR+DSYIGVMIDDLT++GV EPYRMFTSRAE+R+SLR DNAD RL Sbjct: 361 LNAAASSLGSDAVQFSRSDSYIGVMIDDLTTRGVTEPYRMFTSRAEFRLSLRADNADQRL 420 Query: 447 TPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYE 506 TP G+++GCIG+ R +RF+ ++ R+L++S + K S I QDG R+AY+ Sbjct: 421 TPKGLEVGCIGDERSRRFSDKMERLEAGRALMESTSYSPKEALSVGIKLSQDGNRRSAYQ 480 Query: 507 FLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPK 566 LS D S L ++ P + ++L ++ YA+Y RQ + + I+ +E IP+ Sbjct: 481 LLSLQDVSFDQLEALDPRLCSVDQGIQDQLAKDALYASYILRQEKDVEAIRRDEAHAIPE 540 Query: 567 DFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 DF Y L LS+EL+ KLS +P NL QA+K+EGMTP Sbjct: 541 DFGYGDLDGLSSELRSKLSAARPANLAQAAKVEGMTP 577 >gi|163742611|ref|ZP_02149997.1| glucose-inhibited division protein A [Phaeobacter gallaeciensis 2.10] gi|161384196|gb|EDQ08579.1| glucose-inhibited division protein A [Phaeobacter gallaeciensis 2.10] Length = 624 Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust. Identities = 325/603 (53%), Positives = 423/603 (70%), Gaps = 1/603 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M + +YDV+V+GGGHAG EAA AA++G TAL+T IG MSCNPAIGGLGKGHLVR Sbjct: 1 MKHPNYDVVVVGGGHAGTEAAHAAARMGVKTALVTLTKDGIGVMSCNPAIGGLGKGHLVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDALDG+MGRVAD AGIQFR+LN +KGPAV+GPR Q+DR++YR M EI +Q NLD++ Sbjct: 61 EIDALDGVMGRVADKAGIQFRLLNRRKGPAVQGPRAQSDRKIYRREMLAEIEAQPNLDIV 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 GEV F + I + + D S I V+LT+GTFLRGVIHIG + P GRMGD PS Sbjct: 121 TGEVVDFLMTGDKIRGVRLADESEITSRAVILTSGTFLRGVIHIGDVSKPGGRMGDRPSV 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 L FD GRLKTGTP RLDG+TI W+K E Q D+ FSF+T ++ Q+ C Sbjct: 181 RLAERLDSFDLQLGRLKTGTPPRLDGRTIAWEKLEGQPGDDDPTFFSFLTTSVSASQVVC 240 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 GIT TN TH II +N++ SA+Y G I GPRYCPSIEDK+VRF ++ HQIFLEPEG+ Sbjct: 241 GITHTNTHTHDIIRDNLERSAMYGGHIDGVGPRYCPSIEDKVVRFSDKTSHQIFLEPEGV 300 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + VYPNGIST+LP ++Q +++R+I GLE I++PGYAIEYDY++P+ L L K Sbjct: 301 DDHTVYPNGISTSLPLDVQERYVRSIVGLEDAVILQPGYAIEYDYVDPRALGLDLALKSY 360 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GL+LAGQINGTTGYEEAAAQGLVAG+N+AR S +++ + FSR+DSYIGVM+DDLT+ GV Sbjct: 361 QGLYLAGQINGTTGYEEAAAQGLVAGLNAARYSKEMEPVTFSRSDSYIGVMVDDLTTNGV 420 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAE+R+SLR DNAD RLT IG LGC+GE R+ F++ +++ R+ + + Sbjct: 421 TEPYRMFTSRAEFRLSLRADNADQRLTGIGSNLGCVGEVRRGLFSRKMEKLEEARAKMDA 480 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 T K ++ I+ QDG RTA + L++PD + +++ + PD + +++ ++ Sbjct: 481 RQFTPKEINEAGIAVNQDGNRRTATDVLAFPDVAFEDILRLLPDLETCEDPIRRQIERDA 540 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 YA Y RQ E + +K +E IP DF Y LSNEL+ KL +P L QA +++G Sbjct: 541 LYANYIIRQKREIEALKRDEGYRIPPDFSY-DFEGLSNELRGKLEKSRPETLAQAGRVDG 599 Query: 601 MTP 603 MTP Sbjct: 600 MTP 602 >gi|83309101|ref|YP_419365.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Magnetospirillum magneticum AMB-1] gi|123543730|sp|Q2WBG9|MNMG_MAGSA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|82943942|dbj|BAE48806.1| NAD/FAD-utilizing enzyme apparently involved in cell division [Magnetospirillum magneticum AMB-1] Length = 637 Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust. Identities = 328/618 (53%), Positives = 427/618 (69%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 S DV+VIG GHAGCEAAA AA+ GA T L+T + TIG MSCNPAIGGL KG LVREIDA Sbjct: 16 SCDVVVIGAGHAGCEAAAAAARFGARTVLLTQRLETIGEMSCNPAIGGLAKGQLVREIDA 75 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 +DGLMGRV D AGIQFR+LN KG AV+GPR QADR+LYRLAM+ + ENL +++G Sbjct: 76 MDGLMGRVIDRAGIQFRILNRSKGAAVQGPRAQADRKLYRLAMRAALDETENLSLLEGSA 135 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 ++ +V+ D S I C VV+TTGTFLRG+IH+G+ PAGR+GD+PS L Sbjct: 136 EDLVITDGRVAGVVLADGSTIACGAVVITTGTFLRGLIHLGEKTWPAGRVGDAPSLGLSL 195 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + + GRLKTGTPARLDG+TI WD ++Q D+ +PFS++T++IT Q+ CGIT Sbjct: 196 ALERAGLPLGRLKTGTPARLDGRTIHWDSLDRQEGDDPPVPFSYLTERITTPQVACGITA 255 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETH II N++ + +YSG I+S GPRYCPSIEDK+VRF +R HQIFLEPEGL+ Sbjct: 256 TTPETHAIIRANLERAPMYSGQIQSTGPRYCPSIEDKVVRFADRERHQIFLEPEGLDDHT 315 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LPE++Q I TIPGLE+ +IRPGYAIEYD+++P+ L +LETK + GLF Sbjct: 316 VYPNGISTSLPEDVQLAMIATIPGLEQCRVIRPGYAIEYDFVDPRALHRSLETKGVGGLF 375 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEAA QGL+AG+N+AR+ + R D+Y+GVMIDDL S G EPY Sbjct: 376 LAGQINGTTGYEEAAGQGLMAGLNAARRCAGSAPLVLDRADAYLGVMIDDLVSLGTSEPY 435 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD+RLTP G + GC+ R F R+LL+SL + Sbjct: 436 RMFTSRAEYRLLLRADNADSRLTPKGREAGCVDSERWAAFMVKAAGLERGRALLQSLKGS 495 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 L + +DG R+A++ L+YP+ +Q L ++ P+ S V E+L+IE YA Sbjct: 496 PDWLRRQGLEINRDGVVRSAWDLLAYPELGLQALAAVWPELDSLSGAVAEQLEIEGRYAG 555 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + + + EE + D DY ++ +LSNE+++KL +P L A++I G+TPA Sbjct: 556 YLDRQEADIRAYRREEGLALSADLDYDAIGSLSNEVRQKLKAARPETLAAAARIPGVTPA 615 Query: 605 ALNLLLIYIKKNTVKLNE 622 A+ LL ++KK + E Sbjct: 616 AVTALLGHVKKMVLDWAE 633 >gi|157825212|ref|YP_001492932.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rickettsia akari str. Hartford] gi|166199726|sp|A8GLZ9|MNMG_RICAH RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|157799170|gb|ABV74424.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rickettsia akari str. Hartford] Length = 622 Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust. Identities = 323/610 (52%), Positives = 432/610 (70%), Gaps = 1/610 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAG EAAA +A+LG ST LIT K +G MSCNPAIGG+ KG LV+EIDAL Sbjct: 4 YDVIVIGGGHAGVEAAAASARLGVSTLLITLKPDNLGEMSCNPAIGGIAKGTLVKEIDAL 63 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGLMG V D AGI +++LN +GPAV GPR QADR+LY+ AM + + + NLD++ G+V Sbjct: 64 DGLMGYVIDQAGIHYKMLNETRGPAVWGPRAQADRKLYKKAMYQILTNYPNLDILYGKVE 123 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + + +++IV+ ++S I C ++LTTGTFL G+IHIGK KIPAGR+ + PS L + Sbjct: 124 DIEIKSSKVAAIVLNNDSKIPCQKIILTTGTFLSGLIHIGKKKIPAGRVDEEPSYGLSKT 183 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 K F RLKTGTP R+DG+TI + KT Q D+ PFS +T+ + QI C IT+T Sbjct: 184 LKKVGFKIARLKTGTPPRIDGRTIDYSKTALQPGDKAPRPFSELTNVVNVPQINCFITKT 243 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 ETH II EN+ SA+YSG I+ GPRYCPSIEDKIVRF ++ H+IFLEPEGL+ + Sbjct: 244 TSETHDIIRENLNKSAMYSGQIEGIGPRYCPSIEDKIVRFSTKSEHRIFLEPEGLDDYTI 303 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YPNGIST+LPE++QH+ I+TIPGLE V ++R GYAIEYDY++P+E+ TLETKKI+GL+ Sbjct: 304 YPNGISTSLPEDVQHKLIKTIPGLENVKVLRLGYAIEYDYVDPREISVTLETKKIAGLYF 363 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAA QG++AGIN+A +R +SYIGVMIDDLT+ G +EPYR Sbjct: 364 AGQINGTTGYEEAAGQGIIAGINAALAVKDQAQFILTRANSYIGVMIDDLTTFGTIEPYR 423 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSR+EYR+SLR DNAD RLT +G+ +G I E+R+K F K ++ +SLL +L T+ Sbjct: 424 MFTSRSEYRLSLRADNADLRLTELGINIGVISEKRKKIFTKKYEDIEKTKSLLNTLSFTT 483 Query: 486 KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIESSYAA 544 L+ I QDG +T + P F+I+ I P ++ ++ +++ L IE+ YA+ Sbjct: 484 SKLAKMDIQVAQDGTYKTVLDLFKIPSFNIEQAIKIFPMLKEMQNNNILQLLYIEAKYAS 543 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + + EE +LIPK+ DY +P++S E++EKLS KP + A +I G+TPA Sbjct: 544 YLTRQQADINLFQSEEAQLIPKNIDYFKIPSISLEIQEKLSSHKPTTIGLARRIPGITPA 603 Query: 605 ALNLLLIYIK 614 A+ ++IY+K Sbjct: 604 AITSIIIYLK 613 >gi|239946969|ref|ZP_04698722.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rickettsia endosymbiont of Ixodes scapularis] gi|239921245|gb|EER21269.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rickettsia endosymbiont of Ixodes scapularis] Length = 622 Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust. Identities = 318/610 (52%), Positives = 430/610 (70%), Gaps = 1/610 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAG EAAA +A+LG T LIT K +G MSCNPAIGG+ KG LV+EIDAL Sbjct: 4 YDVIVIGGGHAGVEAAATSARLGVPTLLITLKPENLGEMSCNPAIGGIAKGTLVKEIDAL 63 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGLMG V D AGI ++ LN +GPAV GPR QADR+LY+ AM + + + NLD++ G+V Sbjct: 64 DGLMGYVIDQAGIHYKTLNETRGPAVWGPRAQADRKLYKKAMYQILTNYPNLDILYGKVE 123 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + + I ++++ + S I C ++LTTGTFL G+IHIG+ KIPAGR+ + PS L N+ Sbjct: 124 DIEIKSSKIEAVILNNGSKILCQKIILTTGTFLSGLIHIGQKKIPAGRVDEEPSYGLSNT 183 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + F RLKTGTP R+DG+TI + KT Q D+ PFS +T+ + QI C IT+T Sbjct: 184 LKQIGFKLARLKTGTPPRIDGRTINYSKTILQPGDKIPRPFSELTNVVNVPQINCFITKT 243 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 ETH II EN+ SA+YSG I+ GPRYCPSIEDKIVRF ++ H+IFLEPEGL+ + Sbjct: 244 TSETHDIIRENLDKSAMYSGQIEGIGPRYCPSIEDKIVRFSTKSEHRIFLEPEGLDDYTI 303 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YPNGIST+LPE++Q++ I+TI GLE ++RPGYAIEYDY++P+E+ TLETKKI+GL+ Sbjct: 304 YPNGISTSLPEDVQYKLIKTILGLENAKVLRPGYAIEYDYVDPREISVTLETKKIAGLYF 363 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAA QG++AGIN+A +R +SYIGVMIDDLT+ G +EPYR Sbjct: 364 AGQINGTTGYEEAAGQGIIAGINAALAVKDQAPFMLTRANSYIGVMIDDLTTFGTIEPYR 423 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSR+EYR+SLR DNAD RLT +GM +G + E+R+K F K ++ +SLL +L LT+ Sbjct: 424 MFTSRSEYRLSLRADNADLRLTELGMNIGVVSEKRKKIFTKKCEDIEKTKSLLNTLSLTT 483 Query: 486 KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIESSYAA 544 L+ I QDG +T + P+F+++ I P ++ ++ +++ L IE+ YA+ Sbjct: 484 SKLAKMGIQVAQDGTYKTVLDLFKIPNFNVEQAIKIFPMLKETQNNNILQLLYIEAKYAS 543 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + + EE +LIPK+ DY +P++S E++EKLS KP + A +I G+TPA Sbjct: 544 YLTRQHADINLFQSEEAQLIPKNIDYFKIPSISLEIQEKLSSHKPATIGVARRIPGITPA 603 Query: 605 ALNLLLIYIK 614 A+ ++IY+K Sbjct: 604 AITAIIIYLK 613 >gi|238650523|ref|YP_002916375.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rickettsia peacockii str. Rustic] gi|259495852|sp|C4K176|MNMG_RICPU RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|238624621|gb|ACR47327.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rickettsia peacockii str. Rustic] Length = 622 Score = 649 bits (1674), Expect = 0.0, Method: Compositional matrix adjust. Identities = 320/610 (52%), Positives = 433/610 (70%), Gaps = 1/610 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAG EAAA +A+LG T LIT K +G MSCNPAIGG+ KG LV+EIDAL Sbjct: 4 YDVIVIGGGHAGVEAAAASARLGVPTLLITLKPENLGEMSCNPAIGGIAKGTLVKEIDAL 63 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGLMG V D AGI +++LN +GPAV GPR QADR+LY+ AM + + + NLD++ G+V Sbjct: 64 DGLMGYVIDQAGIHYKMLNETRGPAVWGPRAQADRKLYKKAMYQILTNYPNLDILYGKVE 123 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + + I ++++ + S I C ++LTTGTFL G+IHIG+ KIPAGR+ + PS L N+ Sbjct: 124 DIEIKSSKIEAVILNNGSKILCQKIILTTGTFLSGLIHIGQKKIPAGRVDEEPSYGLSNT 183 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + F RLKTGTP R+DG+TI + KT Q D+ PFS +T+ + QI C IT T Sbjct: 184 LKQIGFKLARLKTGTPPRIDGRTIDYSKTILQPGDKIPRPFSELTNIVNVSQINCFITTT 243 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 ETH II EN+ SA+YSG I+ GPRYCPSIEDKIVRF ++ H+IFLEPEGL+ + Sbjct: 244 TSETHDIIRENLDKSAMYSGQIEGIGPRYCPSIEDKIVRFSTKSEHRIFLEPEGLDDYTI 303 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YPNGIST+LPE++QH+ I+TIPGLE V ++RPGYAIEYDY++P+E+ TLETKKI+GL+L Sbjct: 304 YPNGISTSLPEDVQHKLIKTIPGLENVKVLRPGYAIEYDYVDPREISVTLETKKIAGLYL 363 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAA QG++AGIN+A +R +SYIGVMIDDLT+ G +EPYR Sbjct: 364 AGQINGTTGYEEAAGQGIIAGINAALAVKDQAPFMLTRANSYIGVMIDDLTTFGTIEPYR 423 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSR+EYR+SLR DN+D RLT +GM +G + E+R+K F K ++ ++SLL +L LT+ Sbjct: 424 MFTSRSEYRLSLRADNSDLRLTELGMNIGVVSEKRKKIFTKKCEDIEKIKSLLNTLSLTT 483 Query: 486 KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIESSYAA 544 L+ I QDG +T + P+F+++ I P ++ ++ +++ L IE+ YA+ Sbjct: 484 SKLAKMGIQVAQDGTYKTVLDLFKIPNFNVEQAIKIFPMLKETQNNNILQLLYIEAKYAS 543 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + + EE + IPK+ DY +P++S E++EKLS KP + A +I G+TPA Sbjct: 544 YLTRQHADINLFQSEEAQFIPKNLDYFKIPSISLEIQEKLSSHKPTTIGVARRIPGITPA 603 Query: 605 ALNLLLIYIK 614 A+ ++IY+K Sbjct: 604 AITAIIIYLK 613 >gi|15892007|ref|NP_359721.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rickettsia conorii str. Malish 7] gi|21263671|sp|Q92JI3|MNMG_RICCN RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|15619122|gb|AAL02622.1| glucose inhibited division protein A [Rickettsia conorii str. Malish 7] Length = 622 Score = 649 bits (1673), Expect = 0.0, Method: Compositional matrix adjust. Identities = 319/610 (52%), Positives = 434/610 (71%), Gaps = 1/610 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAG EAAA +A+LG T LIT K +G MSCNPAIGG+ KG LV+EIDAL Sbjct: 4 YDVIVIGGGHAGVEAAAASARLGVPTLLITLKPENLGEMSCNPAIGGIAKGTLVKEIDAL 63 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGLMG V D AGI +++LN +GPAV GPR QADR+LY+ AM + + + NLD++ G+V Sbjct: 64 DGLMGYVIDQAGIHYKMLNETRGPAVWGPRAQADRKLYKKAMYQILTNYPNLDILYGKVE 123 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + + I ++++ + S I C ++LTTGTFL G+IHIG+ KIPAGR+ + PS L N+ Sbjct: 124 DIEIKSSKIEAVILNNGSKILCQKIILTTGTFLSGLIHIGQKKIPAGRVDEEPSYGLSNT 183 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + F RLKTGTP R+DG+TI + KT Q D+ PFS +T+ + QI C IT+T Sbjct: 184 LKQIGFKLARLKTGTPPRIDGRTIDYSKTILQPGDKIPRPFSELTNIVNVSQINCFITKT 243 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 ETH II EN+ SA+YSG I+ GPRYCPSIEDKIVRF ++ H+IFLEPEGL+ + Sbjct: 244 TSETHDIIRENLDKSAMYSGQIEGIGPRYCPSIEDKIVRFSTKSEHRIFLEPEGLDDYTI 303 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YPNGIST+LPE++QH+ I+TIPGLE V ++RPGYAIEYDY++P+E+ TLETKKI+GL+L Sbjct: 304 YPNGISTSLPEDVQHKLIKTIPGLENVKVLRPGYAIEYDYVDPREISVTLETKKIAGLYL 363 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAA QG++AGIN+A +R +SYIGVMIDDLT+ G +EPYR Sbjct: 364 AGQINGTTGYEEAAGQGIIAGINAALAVKDQAPFMLTRANSYIGVMIDDLTTFGTIEPYR 423 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSR+EYR+SLR DN+D RLT +GM +G + E+R+K F K ++ ++SLL +L L++ Sbjct: 424 MFTSRSEYRLSLRADNSDLRLTELGMNIGVVSEKRKKIFTKKCEDIEKIKSLLNTLSLST 483 Query: 486 KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIESSYAA 544 L+ I QDG +T + P+F+++ I P ++ ++ +++ L IE+ YA+ Sbjct: 484 SKLAKMGIQVAQDGTYKTVLDLFKIPNFNVEQAIKIFPMLKETQNNNILQLLYIEAKYAS 543 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + + EE + IPK+ DY +P++S E++EKLS KP + A +I G+TPA Sbjct: 544 YLTRQHADINLFQSEEAQFIPKNIDYFKIPSISLEIQEKLSSHKPTTIGVARRIPGITPA 603 Query: 605 ALNLLLIYIK 614 A+ ++IY+K Sbjct: 604 AITAIIIYLK 613 >gi|163737993|ref|ZP_02145409.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Phaeobacter gallaeciensis BS107] gi|161388609|gb|EDQ12962.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Phaeobacter gallaeciensis BS107] Length = 627 Score = 649 bits (1673), Expect = 0.0, Method: Compositional matrix adjust. Identities = 321/599 (53%), Positives = 422/599 (70%), Gaps = 1/599 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDV+V+GGGHAG EAA AA++G TAL+T IG MSCNPAIGGLGKGHLVREIDA Sbjct: 8 NYDVVVVGGGHAGTEAAHAAARMGVKTALVTLTKDGIGVMSCNPAIGGLGKGHLVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDG+M RVAD AGIQFR+LN +KGPAV+GPR Q+DR++YR M EI +Q NLD++ GEV Sbjct: 68 LDGVMARVADKAGIQFRLLNRRKGPAVQGPRAQSDRKIYRREMLAEIEAQPNLDIVTGEV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 F + + I + + D S I V+LT+GTFLRGVIHIG + P GRMGD PS L Sbjct: 128 VDFLMKGDKIRGVRLADESEITSHAVILTSGTFLRGVIHIGDVSKPGGRMGDKPSVRLAE 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 FD GRLKTGTP RLDG+TI W+K E Q D+ FSF+T ++ Q+ CGIT Sbjct: 188 RLDSFDLQLGRLKTGTPPRLDGRTIAWEKLEGQPGDDDPTFFSFLTTSVSASQVVCGITH 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II +N++ SA+Y G I GPRYCPSIEDK+VRF ++ HQIFLEPEG++ Sbjct: 248 TNTHTHDIIRDNLERSAMYGGHIDGVGPRYCPSIEDKVVRFSDKTSHQIFLEPEGVDDHT 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LP ++Q ++R++ GLE I++PGYAIEYDY++P+ L L K GL+ Sbjct: 308 VYPNGISTSLPLDVQEHYVRSVVGLEDAVILQPGYAIEYDYVDPRALGLDLALKSCQGLY 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEAAAQGLVAG+N+AR S +++ + FSR+DSYIGVM+DDLT+ GV EPY Sbjct: 368 LAGQINGTTGYEEAAAQGLVAGLNAARYSKEMEPVTFSRSDSYIGVMVDDLTTNGVTEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAE+R+SLR DNAD RLT IG LGC+GE R++ F++ +++ +R+ + + T Sbjct: 428 RMFTSRAEFRLSLRADNADQRLTGIGSNLGCVGEVRRELFSRKMEKLEEVRARMDTRQFT 487 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 K ++ I+ QDG RTA + L++PD + +++ + P+ + +++ ++ YA Sbjct: 488 PKEINEAGIAVNQDGNRRTATDVLAFPDVAFEDILRLLPELETCEDSIRRQIERDALYAN 547 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y RQ E + +K +E IP DF Y LSNEL+ KL +P L QA +++GMTP Sbjct: 548 YIIRQKREIEALKRDEGYRIPSDFSY-DFEGLSNELRGKLEKSRPGTLAQAGRVDGMTP 605 >gi|91974910|ref|YP_567569.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rhodopseudomonas palustris BisB5] gi|123763117|sp|Q13E21|MNMG_RHOPS RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|91681366|gb|ABE37668.1| glucose inhibited division protein A [Rhodopseudomonas palustris BisB5] Length = 626 Score = 647 bits (1670), Expect = 0.0, Method: Compositional matrix adjust. Identities = 335/618 (54%), Positives = 437/618 (70%), Gaps = 1/618 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + SYDVIVIGGGHAGCEAAA AA+LGA+TAL+TH+ +TIG+MSCNPAIGGLGKGHLVRE Sbjct: 1 MRNSYDVIVIGGGHAGCEAAAAAARLGATTALVTHRFATIGAMSCNPAIGGLGKGHLVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DALDGLMGRVADA GIQFR+LN +KGPAVRGPR QADR+LY AMQ I + +L VI+ Sbjct: 61 VDALDGLMGRVADAGGIQFRMLNRRKGPAVRGPRAQADRKLYAAAMQAAIRATVHLSVIE 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 GE + ++ I + D VV+TTGTFLRG+IH+G+ PAGR+ ++P+ Sbjct: 121 GEADALLSADGRVTGIRLADGREFAAGAVVITTGTFLRGLIHLGEQSWPAGRIDEAPALG 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L SF F GRLKTGTP RLDG+TI W E Q D+ PFS +T IT QIECG Sbjct: 181 LSRSFEALGFALGRLKTGTPPRLDGRTIDWGAVEMQPGDDPPEPFSVLTPAITTPQIECG 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 ITRT TH +I +N+ S +YSG I+S GPRYCPSIEDKIVRFG+R+GHQIFLEPEGL+ Sbjct: 241 ITRTTPATHAVIRDNVHRSPMYSGQIQSTGPRYCPSIEDKIVRFGDRDGHQIFLEPEGLD 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 VYPNGIST+LPEE+Q ++TIPGLE+ ++RPGYAIEYD+++P+EL PTL+TK++ Sbjct: 301 DPTVYPNGISTSLPEEVQRAILKTIPGLERTELVRPGYAIEYDHVDPRELEPTLQTKRLR 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLFLAGQINGTTGYEEAAAQGLVAG+N+ + D F R D Y+GVMIDDL ++G+ Sbjct: 361 GLFLAGQINGTTGYEEAAAQGLVAGLNAVLAAGGGDPAVFDRADGYLGVMIDDLVTRGIN 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR++LR DNAD RLT G+ LGC+G R + ++L +SL Sbjct: 421 EPYRMFTSRAEYRLTLRADNADQRLTDKGLALGCVGAERAAFHRTKMAALADAKALAQSL 480 Query: 482 VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +T S +S +DG+ R+A++ LSYP+ + +I P+ S + ++I++ Sbjct: 481 SITPNEASRHGLSLNRDGQRRSAFDLLSYPEIGWDEVKAIWPELAAVSPAIAVHVEIDAK 540 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y RQ + + + +E L+ + DY+ +P LSNE + +L +P + QA +++G+ Sbjct: 541 YHVYLARQTADVEAFRRDEGLLL-TEIDYAQVPGLSNEARNRLERHRPRTVGQAGRLDGI 599 Query: 602 TPAALNLLLIYIKKNTVK 619 TPAAL +L Y+++ K Sbjct: 600 TPAALGILAAYLRREARK 617 >gi|260428764|ref|ZP_05782741.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Citreicella sp. SE45] gi|260419387|gb|EEX12640.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Citreicella sp. SE45] Length = 622 Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust. Identities = 306/580 (52%), Positives = 408/580 (70%) Query: 26 KLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNV 85 ++GA TAL+T + IG MSCNPAIGGLGKGHLVREIDA+DG+MGRVAD AGIQFR+LN Sbjct: 26 RMGAKTALVTLTEAGIGVMSCNPAIGGLGKGHLVREIDAMDGVMGRVADRAGIQFRLLNR 85 Query: 86 KKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMI 145 +KGPAV+GPR QADR++YR MQRE+ NL V++GEV + +V+ D S + Sbjct: 86 RKGPAVQGPRAQADRKIYRETMQREMRGTPNLTVVEGEVVDLLLNGRTVGGVVLDDGSEL 145 Query: 146 RCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLD 205 + S VVLTTGTFLRGVIHIG P GRMGD PS L + + GRLKTGTP RLD Sbjct: 146 KASAVVLTTGTFLRGVIHIGDKSRPGGRMGDRPSVRLAERIDELGLELGRLKTGTPPRLD 205 Query: 206 GKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSG 265 G+TI WD+ E+Q DE + FSF++ Q+ CGIT TN TH II EN+ SA+Y G Sbjct: 206 GRTIAWDQLEEQPGDEDPVLFSFLSAAPYAHQVSCGITHTNERTHEIIRENLDRSAMYGG 265 Query: 266 DIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRT 325 I+ GPRYCPSIEDK+VRF ++ HQIFLEPEGL+ +YPNGIST+LPE++Q ++R+ Sbjct: 266 HIEGIGPRYCPSIEDKVVRFSDKLSHQIFLEPEGLDDHTIYPNGISTSLPEDVQVDYVRS 325 Query: 326 IPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVA 385 I GLE I++PGYAIEYD+++P+ L L + +SGLFLAGQINGTTGYEEA+AQGLVA Sbjct: 326 IFGLENAVILQPGYAIEYDFVDPRSLDLRLAVRNVSGLFLAGQINGTTGYEEASAQGLVA 385 Query: 386 GINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNR 445 G+N+A ++ D + F R+DSYIGVM+DDLT++GV EPYRMFTSRAE+R+SLR DNAD R Sbjct: 386 GLNAAAEALGRDPVQFGRSDSYIGVMVDDLTTRGVTEPYRMFTSRAEFRLSLRADNADQR 445 Query: 446 LTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAY 505 LTP ++LGC+ R+ F + ++ R +L++ + L + DG+ R + Sbjct: 446 LTPKAIELGCLSNERRASFERKMERLAQGRKMLETRQFAPRTLVDMGLQVAPDGQKRNGF 505 Query: 506 EFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIP 565 + L++PD ++ L S P + + +L+ ++ YA Y RQ + + ++ +E +IP Sbjct: 506 QLLAFPDVTMSTLVSGEPSFSEIDPEIALQLERDALYANYIERQKRDVEALRRDEAMVIP 565 Query: 566 KDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAA 605 +DFD++++ LSNELK KLS+ +P NL QA ++GMTPAA Sbjct: 566 RDFDFAAVEGLSNELKHKLSLARPENLAQAGNVDGMTPAA 605 >gi|144899661|emb|CAM76525.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Magnetospirillum gryphiswaldense MSR-1] Length = 622 Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust. Identities = 307/585 (52%), Positives = 396/585 (67%) Query: 31 TALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPA 90 T L T + TIG MSCNPAIGGL KG LVREIDALDG+MGR D GIQFR+LN KGPA Sbjct: 34 TILATQRLETIGEMSCNPAIGGLAKGQLVREIDALDGVMGRAIDKGGIQFRILNRSKGPA 93 Query: 91 VRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTV 150 V+GPR QADR+LYR A+Q + Q+NL ++QG V + ++ V+ D I C V Sbjct: 94 VQGPRAQADRKLYRQAVQALLAEQDNLTLVQGSVEDLIYKDGRVAGAVLADGRTITCGAV 153 Query: 151 VLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTII 210 V+TTGTFLRG+IH G+ PAGR GD P+N+L + + RLKTGTPARLDG+TI Sbjct: 154 VVTTGTFLRGLIHCGEKTWPAGRFGDEPANNLSTALARAGLPLDRLKTGTPARLDGRTIH 213 Query: 211 WDKTEKQFADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSY 270 WD+ E Q D+ +PFS++TD+I+ QI CGIT TN TH II N+ + +YSG I+S Sbjct: 214 WDQLEMQAGDDPPVPFSYLTDRISTPQIACGITHTNERTHAIIRANLHRAPMYSGQIQSV 273 Query: 271 GPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLE 330 GPRYCPSIEDK+VRF ++ HQIFLEPEGL+ VYPNGIST+LP ++Q IRTIPGLE Sbjct: 274 GPRYCPSIEDKVVRFAGKDSHQIFLEPEGLDDPTVYPNGISTSLPADVQEAMIRTIPGLE 333 Query: 331 KVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSA 390 V+IIRPGYAIEYD+++P++L +LETK ++GLFLAGQINGTTGYEEA AQGL+AG+N+A Sbjct: 334 DVSIIRPGYAIEYDFVDPRQLKRSLETKVMNGLFLAGQINGTTGYEEAGAQGLLAGLNAA 393 Query: 391 RKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIG 450 R + R D+Y+GVM+DDL S G EPYRMFTSRAEYR+ LR DNAD RLT G Sbjct: 394 RFVAGNEAFVLDRADAYMGVMVDDLVSLGTREPYRMFTSRAEYRLILRADNADLRLTAKG 453 Query: 451 MKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSY 510 M+ GC+G R F Q R LL SL + L + QDG R+A++ L+Y Sbjct: 454 MEAGCVGSVRADAFTAKAQALEEGRGLLDSLRASPNVLKKAGLEVNQDGVVRSAWDLLAY 513 Query: 511 PDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDY 570 P+ + L + P S V E+L+I+ Y Y RQ + + + EE +P D DY Sbjct: 514 PNMDLPRLAQVWPALAALSGAVAEQLEIDGKYQGYLSRQEADIRAYRAEENLTLPADMDY 573 Query: 571 SSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 ++ +LS E+++KL +P L A++I G+TPAA+ LL ++K+ Sbjct: 574 DAIGSLSAEVRQKLKAAQPETLAVAARISGITPAAITALLAHVKR 618 >gi|126463650|ref|YP_001044764.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rhodobacter sphaeroides ATCC 17029] gi|166199725|sp|A3PNS6|MNMG_RHOS1 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|126105314|gb|ABN77992.1| glucose inhibited division protein A [Rhodobacter sphaeroides ATCC 17029] Length = 621 Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust. Identities = 329/612 (53%), Positives = 421/612 (68%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DV+VIGGGHAGCEAAA AA++G ALIT + S +G MSCNPAIGGLGKGHLVREID Sbjct: 2 KHFDVVVIGGGHAGCEAAATAARMGVQVALITLRKSGLGVMSCNPAIGGLGKGHLVREID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDG+MGR AD AGIQFR+LN KKGPAV+GPR QADR LYR A+QR + Q L +I+GE Sbjct: 62 ALDGIMGRAADEAGIQFRLLNRKKGPAVQGPRAQADRRLYREAVQRLLAEQPGLTIIEGE 121 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + + + D + + V+LT+GTFL GVIHIG + P GRMGD PS L Sbjct: 122 VVDLQVNGGRVQGVSLADGTSVGAGRVILTSGTFLNGVIHIGDQRRPGGRMGDDPSQRLA 181 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + GRLKTGTP RLDG+TI W + E Q DE + FSF+ RQI CGIT Sbjct: 182 AVLGELSLARGRLKTGTPPRLDGRTIRWAELEMQPGDEDPVVFSFLNRVPKARQIACGIT 241 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH+I+ +N+ SA+Y G I+ GPRYCPSIEDKIVRF ++ HQ+FLEPEGL+ D Sbjct: 242 HTNARTHQIVRDNLSRSAMYGGHIEGVGPRYCPSIEDKIVRFADKEEHQVFLEPEGLDDD 301 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNGIST+LP E+Q ++RTI GLE V I++PGYAIEYDY +P+EL PTLE K + GL Sbjct: 302 TVYPNGISTSLPAEVQEAYVRTIAGLEDVRILQPGYAIEYDYFDPRELRPTLEVKALGGL 361 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGTTGYEEAAAQGL AG+N+A + + + FSR+ SY+GVMIDDLTS+GV EP Sbjct: 362 YFAGQINGTTGYEEAAAQGLAAGLNAALSIREREPLHFSRSGSYLGVMIDDLTSRGVTEP 421 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R+SLR DNAD RLTPIG+ LGC+ + R++ F K + R+LL+ Sbjct: 422 YRMFTSRAEFRLSLRADNADQRLTPIGLDLGCVSDARRESFNKKRELLEKGRALLEGSSF 481 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 T L+ I QDG RTA+ +++ + + + + ++L + YA Sbjct: 482 TPSQLNELGIQVSQDGMRRTAFAVMAFGEEAASAVARGVEGYGDLPEEIRQQLAKDGLYA 541 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 + RQ EA +K +E IP DFDY+ L LS+ELK KL +P + QA+++EGMTP Sbjct: 542 QFILRQEEEAAALKRDEAIRIPADFDYAPLSGLSSELKAKLMRARPSTIAQAAQLEGMTP 601 Query: 604 AALNLLLIYIKK 615 +AL L+L +++ Sbjct: 602 SALTLILARLRR 613 >gi|115522412|ref|YP_779323.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rhodopseudomonas palustris BisA53] gi|122297910|sp|Q07UP1|MNMG_RHOP5 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|115516359|gb|ABJ04343.1| glucose inhibited division protein A [Rhodopseudomonas palustris BisA53] Length = 622 Score = 641 bits (1653), Expect = 0.0, Method: Compositional matrix adjust. Identities = 332/613 (54%), Positives = 434/613 (70%), Gaps = 1/613 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIVIGGGHAGCEAAA AA+LGA TAL+TH+ ST+G+MSCNPAIGGLGKGHLVRE+DA Sbjct: 4 AFDVIVIGGGHAGCEAAAAAARLGARTALLTHRFSTVGAMSCNPAIGGLGKGHLVREVDA 63 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMG+VADA GIQFR+LN +KGPAVRGPR QADR+LY AMQ I + NL VI+ E Sbjct: 64 LDGLMGQVADAGGIQFRMLNRRKGPAVRGPRAQADRKLYAAAMQAAIRAIANLTVIEAEA 123 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 T I+ I + D VV+TTGTFLRG+IH+G+ PAGR+ ++P+ L Sbjct: 124 DDLLTADGRITGIRLADGREFSTGAVVVTTGTFLRGLIHLGEQSWPAGRIDEAPALGLSA 183 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 +F + F GRLKTGTPARLDGKTI W+ E Q D+ PFS +T +I+N QI CGITR Sbjct: 184 AFERIGFALGRLKTGTPARLDGKTIYWEAVEMQPGDDPPEPFSVLTARISNPQILCGITR 243 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T TH +I N+ S +YSG I+S GPRYCPSIEDKIVRFG+R+GHQIFLEPEGL+ Sbjct: 244 TTPATHDLIRANVHRSPMYSGQIQSSGPRYCPSIEDKIVRFGDRDGHQIFLEPEGLDDAT 303 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LPEE+Q + TIPGLE+ N++RPGYAIEYD+++P+EL PTL+ K++ GLF Sbjct: 304 VYPNGISTSLPEEVQRGILATIPGLERCNMLRPGYAIEYDHVDPRELQPTLQAKRMRGLF 363 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEAAAQGLVAG+N+AR + + + F R D Y+GVMIDDL ++G+ EPY Sbjct: 364 LAGQINGTTGYEEAAAQGLVAGLNAARCAGGGEGVVFDRADGYLGVMIDDLVTRGITEPY 423 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR++LR DNAD RLT G+ G +G R + + ++ +SL +T Sbjct: 424 RMFTSRAEYRLTLRADNADQRLTDQGIAHGLVGAERAAFHRRKMAALAAAKTWARSLAVT 483 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + ++ +DG R+A+E L+YP+ ++ I P+ + L+I++ Y Sbjct: 484 PNEAAKHGLALNRDGVRRSAFELLAYPEVGWDDVRRIWPELGAVEPAIAVHLEIDAKYDV 543 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + + + +E L+ D DYS +P LSNE + KL +P + QA +++G+TPA Sbjct: 544 YLQRQTADVEAFRRDEG-LVLTDIDYSLVPGLSNEARGKLEKARPRTVGQAGRLDGITPA 602 Query: 605 ALNLLLIYIKKNT 617 AL +L Y+++ Sbjct: 603 ALGILAAYLRREA 615 >gi|217978726|ref|YP_002362873.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Methylocella silvestris BL2] gi|254811514|sp|B8EQ21|MNMG_METSB RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|217504102|gb|ACK51511.1| glucose inhibited division protein A [Methylocella silvestris BL2] Length = 620 Score = 641 bits (1653), Expect = 0.0, Method: Compositional matrix adjust. Identities = 342/611 (55%), Positives = 431/611 (70%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+GGGHAGCEAAA AA++GA TAL+TH +TIG MSCNPAIGGLGKGHLVREIDA Sbjct: 4 AFDVIVVGGGHAGCEAAAAAARMGAKTALLTHSRATIGIMSCNPAIGGLGKGHLVREIDA 63 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRVADAAGIQFRVLN KGPAVRGPR QADR LYR AM+ + NL +++GE Sbjct: 64 LDGLMGRVADAAGIQFRVLNRAKGPAVRGPRAQADRALYRKAMRAALAETANLSIVEGEA 123 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 A E ++ IV D + C V+TTGTFLRGVIH GK+ + AGR+G++P+ L Sbjct: 124 ADLRIENGEVTGIVTADGRALSCRAAVITTGTFLRGVIHRGKVTMAAGRIGENPAIRLGE 183 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F GRLKTGTP RLDGKTI W ++Q D PFS +T I N QI+C IT Sbjct: 184 TLEARGFAMGRLKTGTPPRLDGKTIDWAGLDRQAPDPDPQPFSTLTASIVNPQIDCFITH 243 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T + TH++I +NI S +YSG I GPRYCPSIEDK+VRF +RN HQIFLEPEGL+ D Sbjct: 244 TTVATHKVIRDNIGQSPVYSGAIGGRGPRYCPSIEDKVVRFEDRNSHQIFLEPEGLDDDT 303 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LPEE+Q F+RTIPGLE+V +++PGYAIEYD+I+P+EL TLETKK+ GLF Sbjct: 304 IYPNGISTSLPEEVQDAFLRTIPGLERVAVLQPGYAIEYDFIDPRELKSTLETKKLGGLF 363 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEAAAQGL AG+N+A ++ I F R+++Y+GVMIDDL +GV EPY Sbjct: 364 LAGQINGTTGYEEAAAQGLAAGLNAAARAGGGAPILFERSEAYLGVMIDDLVCRGVTEPY 423 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+SLR DNAD RLT G+K GCIG R F + R LL+ LT Sbjct: 424 RMFTSRAEYRLSLRADNADQRLTGAGLKWGCIGMERSSAFRTKMAALQHARGLLEGFNLT 483 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + + DG R A+E L+ D S+ L +I P+ R+ + E+++I++ YA Sbjct: 484 PNEAAQHGLKINHDGVRRGAFELLALADTSLAKLQAIWPELREIEPSIAEQIEIDAKYAV 543 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + + + +E LIP DY L LS E++ +L ++P +L QAS+IEGMTP Sbjct: 544 YLDRQKRDIEAARRDEALLIPDSVDYDLLTGLSTEIRGRLRQIRPRSLAQASRIEGMTPV 603 Query: 605 ALNLLLIYIKK 615 A+ LL +++ Sbjct: 604 AMTLLAATVRR 614 >gi|51473287|ref|YP_067044.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rickettsia typhi str. Wilmington] gi|81170574|sp|Q68XT0|MNMG_RICTY RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|51459599|gb|AAU03562.1| glucose inhibited division protein A [Rickettsia typhi str. Wilmington] Length = 621 Score = 640 bits (1652), Expect = 0.0, Method: Compositional matrix adjust. Identities = 319/609 (52%), Positives = 421/609 (69%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 Y VI+IGGGHAG EAAA +A+LG T LIT K +G MSCNPAIGG+ KG LV+EIDAL Sbjct: 4 YGVIIIGGGHAGVEAAAASARLGVHTLLITLKPENLGEMSCNPAIGGIAKGTLVKEIDAL 63 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGLMG V D AGI +++LN +GPAV GPR QADR+LY+ M + + + NLD++ G+V Sbjct: 64 DGLMGFVIDKAGIHYKMLNETRGPAVWGPRAQADRKLYKKVMYQILTNYRNLDILYGKVE 123 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + + + ++++ + I C VVLTTGTFL G IHIG +KIPAGR+ + PS L N+ Sbjct: 124 DIQIKSSKVEAVILNNGIKIFCQKVVLTTGTFLSGFIHIGSMKIPAGRIYEEPSYGLSNT 183 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + F RLKTGTP R+DG+TI + KT Q D+ PFS +TD I QI C IT+T Sbjct: 184 LKRLGFKIARLKTGTPPRIDGRTIDYSKTTLQQGDQIPRPFSELTDAIDVPQINCFITKT 243 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 ETH II EN+ SA+YSG IK GPRYCPSIEDKIV+F + H+IFLEPEGL + Sbjct: 244 TAETHDIIRENLDKSAMYSGQIKGIGPRYCPSIEDKIVKFSTKLEHRIFLEPEGLEDYTI 303 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YPNGIST+LP+EIQ++ I+TIPGLE ++RPGYAIEYDY++P+E+ TLETKKI+GL+ Sbjct: 304 YPNGISTSLPKEIQYKLIKTIPGLENAQVLRPGYAIEYDYVDPREINITLETKKITGLYF 363 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAA QG++AGIN+A + +R SYIGVMIDDLT+ G +EPYR Sbjct: 364 AGQINGTTGYEEAAGQGIIAGINAALSVKDQEPFILTRATSYIGVMIDDLTTSGTVEPYR 423 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSR+EYR+SLR DNAD RLT +G+ +G + E+R+ F K + LL L LT+ Sbjct: 424 MFTSRSEYRLSLRADNADLRLTELGINIGVVTEKRKNIFTKKCNNIEKTKLLLNKLSLTT 483 Query: 486 KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAY 545 L+ I QDGK +T + P F+++ I P RK ++ +++ L IE+ YA+Y Sbjct: 484 SKLAKIGIQVAQDGKYKTVLDLFKIPTFNVEQAIKIFPILRKQNNNILQLLYIEAKYASY 543 Query: 546 TGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAA 605 RQ + + EE +LIPK+ DY +P++S E++EKLS KP + A +I G+TPAA Sbjct: 544 LTRQYADINLFQSEEIQLIPKNIDYFKIPSISLEIQEKLSYHKPTTIGVARRISGITPAA 603 Query: 606 LNLLLIYIK 614 + ++IY+K Sbjct: 604 IMAIIIYLK 612 >gi|67458511|ref|YP_246135.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rickettsia felis URRWXCal2] gi|75537022|sp|Q4UN88|MNMG_RICFE RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|67004044|gb|AAY60970.1| Glucose-inhibited division protein A [Rickettsia felis URRWXCal2] Length = 622 Score = 637 bits (1643), Expect = e-180, Method: Compositional matrix adjust. Identities = 320/610 (52%), Positives = 432/610 (70%), Gaps = 1/610 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAG EAAA +A+LGAST LIT K +G MSCNPAIGG+ KG LV+EIDAL Sbjct: 4 YDVIVIGGGHAGVEAAAASARLGASTLLITLKPENLGEMSCNPAIGGIAKGTLVKEIDAL 63 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGLMG V D GI +++LN +GPAV GPR QADR+LY+ AM + + + NLD++ G+V Sbjct: 64 DGLMGYVIDQGGIHYKMLNETRGPAVWGPRAQADRKLYKKAMCQILTNYPNLDILYGKVE 123 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + + + ++++ ++S I C ++LTTGTFL G+IHIG+ KIPAGR+ + PS L N+ Sbjct: 124 DIEIKSSKVEAVILNNDSKILCQKIILTTGTFLSGLIHIGQKKIPAGRVDEEPSYGLSNT 183 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 K F RLKTGTP R+DG+TI + KT Q D+ PFS +T + QI C IT+T Sbjct: 184 LKKVGFKIARLKTGTPPRIDGRTIDYSKTALQPGDKTPRPFSELTSVVNVPQINCFITKT 243 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 ETH II EN+ SA+YSG I+ GPRYCPSIEDKIVRF ++ H+IFLEPEGL+ + Sbjct: 244 TSETHDIIRENLNKSAMYSGQIEGIGPRYCPSIEDKIVRFSTKSEHRIFLEPEGLDDYTI 303 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YPNGIST+LPE++QH+ I+TIPGLE V ++RPGYAIEYDY++P+E+ TLETKKI+GL+ Sbjct: 304 YPNGISTSLPEDVQHKLIKTIPGLENVKVLRPGYAIEYDYVDPREISVTLETKKIAGLYF 363 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAA QG++AGIN+A +R +SYIGVMIDDLT+ G +EPYR Sbjct: 364 AGQINGTTGYEEAAGQGIIAGINAALAVKDQAPFMLTRANSYIGVMIDDLTTFGTIEPYR 423 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSR+EYR+SLR DNAD RLT +G+ +G + E+R+K F K ++ + LL +L LT+ Sbjct: 424 MFTSRSEYRLSLRADNADLRLTELGINIGVVSEKRKKIFTKKCEDIEKTKLLLNTLSLTT 483 Query: 486 KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIESSYAA 544 L+ I QDG +T + P F+++ I P ++ ++ +++ L IE+ YA+ Sbjct: 484 SKLAKMGIQVAQDGTYKTVLDLFKIPSFNVEQAIKIFPMLKEMQNNNILQLLYIEAKYAS 543 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + + EE +LIPK+ DY +P++S E++EKLS KP + A +I G+TPA Sbjct: 544 YLTRQHADINLFQSEEAQLIPKNIDYFKIPSISLEIQEKLSSHKPTTIGVARRISGITPA 603 Query: 605 ALNLLLIYIK 614 A+ ++IY+K Sbjct: 604 AITAIIIYLK 613 >gi|260576110|ref|ZP_05844103.1| glucose inhibited division protein A [Rhodobacter sp. SW2] gi|259021590|gb|EEW24893.1| glucose inhibited division protein A [Rhodobacter sp. SW2] Length = 621 Score = 637 bits (1643), Expect = e-180, Method: Compositional matrix adjust. Identities = 337/613 (54%), Positives = 440/613 (71%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DV+VIGGGHAGCEAAA AA+LGA+TAL+T K + IG MSCNPAIGGLGKGHLVREID Sbjct: 2 KHFDVVVIGGGHAGCEAAAAAARLGATTALVTLKAAGIGVMSCNPAIGGLGKGHLVREID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 A+DGLMGRVAD AGIQ+R+LN +KGPAV+GPR QADR+LYRLAMQ E+ L +I+GE Sbjct: 62 AMDGLMGRVADHAGIQYRLLNRRKGPAVQGPRAQADRKLYRLAMQHELRVLRGLTIIEGE 121 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V +S +V+ S + +VVLT GTFL G+IHIG + GR+GD+PS L Sbjct: 122 VVDLKERAGAVSGVVLACGSELTAGSVVLTAGTFLNGLIHIGDQRQSGGRIGDAPSLRLA 181 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 GRLKTGTP RLDG TI W E Q D+ + FSF+ K RQ+ CGIT Sbjct: 182 ERLSGLGLKKGRLKTGTPPRLDGNTIDWAVLESQAGDDEPVVFSFLHRKPFVRQVACGIT 241 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH I+ +N+ SA+Y G I+ GPRYCPSIEDK+VRF ++ HQ+FLEPEGL+ Sbjct: 242 HTNEQTHDIVRKNLDRSAMYGGHIEGVGPRYCPSIEDKVVRFADKASHQVFLEPEGLDDT 301 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNGIS++LP E+Q ++R+I GLE+V I++PGYAIEYDY +P+ L PTL K ++GL Sbjct: 302 TVYPNGISSSLPAEVQMDYVRSIVGLERVQILQPGYAIEYDYFDPRSLMPTLRLKAMAGL 361 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 +LAGQINGTTGYEEAAAQGL AG+N+A + D FSR+ SYIGVMIDDL + GV EP Sbjct: 362 YLAGQINGTTGYEEAAAQGLAAGLNAALAAFGRDPHLFSRSQSYIGVMIDDLLNHGVTEP 421 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R++LR DNAD RLTP+GM LGC+G+ RQ+ FA +QE + L+SL+L Sbjct: 422 YRMFTSRAEFRLTLRADNADQRLTPVGMALGCVGQHRQRVFAAKMQELAKGTAALQSLLL 481 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 K + S + QDG R+A E L++PD S++ + S+CP+ +++ ++ YA Sbjct: 482 PPKAIESLGVKISQDGNRRSALEVLAFPDSSVEGIASVCPEFAAIEQENRQQIWRDALYA 541 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y+ RQ + A+ ++ +E IP DFDY +L LS+EL KL ++P +LLQAS++EGMTP Sbjct: 542 QYSQRQSVAAEALRRDESVTIPADFDYGALSGLSSELTSKLKAVQPVSLLQASRMEGMTP 601 Query: 604 AALNLLLIYIKKN 616 AAL L+L ++++ Sbjct: 602 AALTLILARLRRS 614 >gi|89052691|ref|YP_508142.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Jannaschia sp. CCS1] gi|122499792|sp|Q28VZ5|MNMG_JANSC RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|88862240|gb|ABD53117.1| glucose inhibited division protein A [Jannaschia sp. CCS1] Length = 624 Score = 633 bits (1633), Expect = e-179, Method: Compositional matrix adjust. Identities = 321/613 (52%), Positives = 416/613 (67%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 +R +DVIV+GGGHAG EAA A + GA TAL+T + +G MSCNPAIGGLGKGHLVREI Sbjct: 6 HRHFDVIVVGGGHAGVEAADAACRAGARTALVTLRKDDLGVMSCNPAIGGLGKGHLVREI 65 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DA+ G+MG ADA+GIQ+R+LN KKG AV+GPRTQ+DR LY+ A+Q + + L VI+G Sbjct: 66 DAMGGVMGCAADASGIQYRLLNRKKGAAVQGPRTQSDRALYKSAIQDHMRNVTELTVIEG 125 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 EVA E + + D I +VVLTTGTFLRGVIHIG GR G + + L Sbjct: 126 EVADVIVESETVCGVSFTDGQSISARSVVLTTGTFLRGVIHIGHETRSGGRFGANRAIKL 185 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGI 242 + GRLKTGTP RL K+I W+ + Q +D+ FSF+T ++ RQI CGI Sbjct: 186 AERLSAMNLPVGRLKTGTPPRLAAKSINWEALDHQPSDDDPTFFSFLTKRVRARQIACGI 245 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II +N+ SA+Y G+I S GPRYCPSIEDK+VRF ++ HQIFLEPEGL + Sbjct: 246 THTNPHTHDIIEQNLGRSAMYGGNIDSVGPRYCPSIEDKVVRFADKVSHQIFLEPEGLTS 305 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VYPNGIST+LP ++Q ++ +I GLE +I++PGYAIEYDYI+P L LE + G Sbjct: 306 ETVYPNGISTSLPIDVQLDYVHSIKGLEHADILQPGYAIEYDYIDPTCLNNRLELQDHPG 365 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LFLAGQINGTTGYEEAAAQGLVAG+N+A + D + FSR +SYIGV++DDL ++GV E Sbjct: 366 LFLAGQINGTTGYEEAAAQGLVAGLNAAFHAQDRDPLTFSRRESYIGVLVDDLVTRGVSE 425 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+SLR DNAD RLTPI L + E R F ++ + +L LV Sbjct: 426 PYRMFTSRAEYRLSLRADNADQRLTPIAADLDLLTEERTSEFTAKMERLSRGYDILNDLV 485 Query: 483 LTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSY 542 +TSK ++ +S DGK RT E L++P + ++ + P + ++L+IE+ Y Sbjct: 486 VTSKQAAAAGMSVNADGKKRTGAELLAFPSVELSDIAQLEPAVGQIDPATAKQLKIEAIY 545 Query: 543 AAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMT 602 A Y RQ +A +K +E + IP DF YSS+ LSNEL+ KL +P L QAS+I+GMT Sbjct: 546 AVYIERQNQDAFALKRDEAKSIPADFPYSSVVGLSNELRMKLIKTRPSTLAQASRIDGMT 605 Query: 603 PAALNLLLIYIKK 615 PAAL L+L I++ Sbjct: 606 PAALALILTKIRQ 618 >gi|288956853|ref|YP_003447194.1| glucose inhibited division protein A [Azospirillum sp. B510] gi|288909161|dbj|BAI70650.1| glucose inhibited division protein A [Azospirillum sp. B510] Length = 634 Score = 633 bits (1632), Expect = e-179, Method: Compositional matrix adjust. Identities = 329/614 (53%), Positives = 421/614 (68%), Gaps = 2/614 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R++DVIV+GGGHAGCEAAA AA++GA T L+THK TIG MSCNPAIGGL KGHLVREID Sbjct: 6 RNFDVIVVGGGHAGCEAAAAAARMGARTLLLTHKIETIGEMSCNPAIGGLAKGHLVREID 65 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDG+M + D GIQFR+LN KGPAVRGPR QADR+LYR AMQ + Q+NL + G Sbjct: 66 ALDGVMAKAIDRGGIQFRILNRSKGPAVRGPRAQADRKLYRQAMQALLAEQDNLFIEAGG 125 Query: 124 VAGFNT-EKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 E I+ +V IR VVLTTGTFLRG+IHIG+ + PAGR+G++PS L Sbjct: 126 AEDLIVDEDQRITGVVTGAGESIRAGAVVLTTGTFLRGLIHIGEERTPAGRVGEAPSIGL 185 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGI 242 ++ + F GRLKTGTP RLDG+TI WD EKQ D PFS+MT++I QI+C I Sbjct: 186 SDTLTRLGFPLGRLKTGTPPRLDGRTIDWDALEKQPGDLPPPPFSYMTERIDTPQIDCAI 245 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T T E H +I N+ + +YSG I GPRYCPSIEDK+VRF ++ HQIFLEPEGL+ Sbjct: 246 TWTTREAHALIRANLHRAPMYSGQITGTGPRYCPSIEDKVVRFADKEKHQIFLEPEGLDD 305 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 VYPNGIST+LP ++Q + ++PGLEKV +IRPGYAIEYDY++P+EL PTLET++ G Sbjct: 306 PTVYPNGISTSLPRDVQLGILASMPGLEKVVMIRPGYAIEYDYVDPRELKPTLETRRAPG 365 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSA-RKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 LFLAGQINGTTGYEEAAAQGL+AGIN+A S D R D+YIGV+IDDL +G Sbjct: 366 LFLAGQINGTTGYEEAAAQGLMAGINAALAASGHRDGFVLDRADAYIGVLIDDLIGRGTN 425 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+ LR DNAD RLT G+ +GC+G R+ FA + R+L+ +L Sbjct: 426 EPYRMFTSRAEYRLLLRADNADQRLTDKGVVIGCVGSERRDAFAAKSAALSAGRALVAAL 485 Query: 482 VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 T L+ ++ QDG R+A + L YPD + L + P+ + + E+L+I+ Sbjct: 486 QATPVELARQGVAVNQDGVRRSAADLLRYPDIDLAALARLWPELGGIAPDIAEQLEIDGK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y GRQ + + + +E +P D D + +LS E+++KL +P L A++I GM Sbjct: 546 YAGYLGRQEADIRAFRKDESLALPDDLDVDGIGSLSAEIRQKLRQSRPATLGAAARIPGM 605 Query: 602 TPAALNLLLIYIKK 615 TPAAL LL ++K+ Sbjct: 606 TPAALVALLRHVKR 619 >gi|330813393|ref|YP_004357632.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Candidatus Pelagibacter sp. IMCC9063] gi|327486488|gb|AEA80893.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Candidatus Pelagibacter sp. IMCC9063] Length = 620 Score = 632 bits (1629), Expect = e-179, Method: Compositional matrix adjust. Identities = 323/615 (52%), Positives = 427/615 (69%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DV+V+GGGHAGCEAAA +A++G STAL+T ++IG MSCNPAIGGLGKGHLVREIDA Sbjct: 3 NFDVVVVGGGHAGCEAAAASARMGVSTALVTTNKNSIGEMSCNPAIGGLGKGHLVREIDA 62 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 DG+M +V+DA+GIQF++LN +GPAVRGPRTQ+DR LY+ M ++S NL++I V Sbjct: 63 FDGVMPKVSDASGIQFKLLNASRGPAVRGPRTQSDRALYKKNMLENLISHCNLNIIYDPV 122 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 F E++ I SI++ I+ ++LTTGTFL GVIHIG PAGR G++P++ L Sbjct: 123 TSFVFEQDNIKSIILASGKEIKFKKIILTTGTFLNGVIHIGSQMTPAGRFGEAPTSGLSE 182 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 KF+ GRLKTGTP RLD +TI +D EKQ ADE FS T KI ++QI C IT Sbjct: 183 QLQKFNLMFGRLKTGTPPRLDARTINFDSLEKQVADENPFFFSTETKKINSKQIACSITY 242 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN E H+II NIK SA+YSG+IK GPRYCPSIEDKIV+F ++ HQIFLEPEGLN Sbjct: 243 TNDEVHKIISRNIKKSAMYSGNIKGVGPRYCPSIEDKIVKFADKQRHQIFLEPEGLNDHT 302 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LPE++Q + + I GL +V +IRPGYAIEYDY++P+EL TLE KKIS + Sbjct: 303 IYPNGISTSLPEDVQREILFNINGLSEVKMIRPGYAIEYDYVDPRELKSTLELKKISSFY 362 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEAAAQGL+AG+N++ + + R+ +YIGVMIDDL +KGV EPY Sbjct: 363 LAGQINGTTGYEEAAAQGLMAGLNASLAVKGHEPLILDRSQAYIGVMIDDLITKGVAEPY 422 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR++LR DNAD RL+PI M++GC+ R K+ + I++ + ++ L ++ L+ Sbjct: 423 RMFTSRAEYRLTLRADNADLRLSPIAMRIGCVSLERCKKIEEKIKKIDMVKISLSNVSLS 482 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 IS DG R + L Y + L SI + +I +L+IE+ Y Sbjct: 483 PNEAKKHGISISMDGVKRNGIDLLRYKNVDYDKLKSIFKELPDSEEDIIGQLKIENHYKG 542 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y +Q + K+ K +E +P D DY + L+ E+K KL ++KP QA +I+GMTPA Sbjct: 543 YYAKQDADIKKFKKDENLKVPSDIDYDKISGLTEEVKNKLRVVKPETFGQALRIDGMTPA 602 Query: 605 ALNLLLIYIKKNTVK 619 A+NLLL + K+ K Sbjct: 603 AINLLLAHTKRYKFK 617 >gi|86747517|ref|YP_484013.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rhodopseudomonas palustris HaA2] gi|123409026|sp|Q2J358|MNMG_RHOP2 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|86570545|gb|ABD05102.1| glucose inhibited division protein A [Rhodopseudomonas palustris HaA2] Length = 626 Score = 631 bits (1628), Expect = e-178, Method: Compositional matrix adjust. Identities = 335/623 (53%), Positives = 440/623 (70%), Gaps = 1/623 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + SYDVIVIGGGHAGCEAAA AA+LGA+TAL+TH+ +T+G+MSCNPAIGGLGKGHLVRE Sbjct: 1 MRNSYDVIVIGGGHAGCEAAAAAARLGAATALVTHRFATVGAMSCNPAIGGLGKGHLVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DALDGLMGRVADA GIQFR+LN +KGPAVRGPR QADR+LY AMQ I + NL VI+ Sbjct: 61 VDALDGLMGRVADAGGIQFRMLNRRKGPAVRGPRAQADRKLYAAAMQAAIRATANLRVIE 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 GE E ++ I + D + VV+TTGTFLRG+IH+G+ PAGR+ ++P+ Sbjct: 121 GEADTLLNEAGRVTGIRLADGRELVAGAVVITTGTFLRGLIHLGEQCWPAGRIDEAPALG 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L SF GRLKTGTP RLDG+TI W E Q D+ PFS +T IT QIECG Sbjct: 181 LSASFEALGLALGRLKTGTPPRLDGRTIDWGAVEMQPGDDPPEPFSVLTPAITTPQIECG 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 ITRT TH +I N+ S +YSG I+S GPRYCPSIEDKIV+FG+R+GHQIFLEPEGL+ Sbjct: 241 ITRTLPATHEVIRANVHRSPMYSGQIQSSGPRYCPSIEDKIVKFGDRDGHQIFLEPEGLD 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 VYPNGIST+LPEE+Q + TIPGLE+ ++RPGYAIEYD+++P+EL PTL+TK++ Sbjct: 301 DPTVYPNGISTSLPEEVQRAILATIPGLERTVMLRPGYAIEYDHVDPRELEPTLQTKRLR 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GL+LAGQINGTTGYEEAAAQGLVAG+N+A + + + F R D Y+GVMIDDL ++G+ Sbjct: 361 GLYLAGQINGTTGYEEAAAQGLVAGLNAALAAGGGEGVVFDRADGYLGVMIDDLVTRGIS 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR++LR DNAD RLT G+ LGC+G R + ++L +SL Sbjct: 421 EPYRMFTSRAEYRLTLRADNADQRLTDKGLALGCVGTERAAFHRGKMAALAEAKALAQSL 480 Query: 482 VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +T + +S +DG+ R+A++ LSYP+ + +I P+ S + ++I++ Sbjct: 481 AITPNEAARHGLSLNRDGQRRSAFDLLSYPEIEWPQVRAIWPELAAVSPSIAGHVEIDAK 540 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ+ + + +E L+ D DY+ +P LSNE + +L +P + QA +++G+ Sbjct: 541 YAVYLERQVADVAAFRRDEGLLL-TDVDYAQVPGLSNEARGRLERHRPRTVGQAGRLDGI 599 Query: 602 TPAALNLLLIYIKKNTVKLNEIV 624 TPAAL +L Y+++ K +V Sbjct: 600 TPAALGILAAYLRREARKRPAVV 622 >gi|146278699|ref|YP_001168858.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rhodobacter sphaeroides ATCC 17025] gi|205375710|sp|A4WVY9|MNMG_RHOS5 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|145556940|gb|ABP71553.1| glucose inhibited division protein A [Rhodobacter sphaeroides ATCC 17025] Length = 624 Score = 629 bits (1622), Expect = e-178, Method: Compositional matrix adjust. Identities = 334/614 (54%), Positives = 433/614 (70%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DVIVIGGGHAGCEAAA AA++G AL+T + S +G MSCNPAIGGLGKGHLVREID Sbjct: 5 KQFDVIVIGGGHAGCEAAAAAARMGVRAALVTLRPSDLGVMSCNPAIGGLGKGHLVREID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDGLMGR ADAAGIQFR+LN KKGPAV+GPR QADR LYR AMQR +L Q LDV++GE Sbjct: 65 ALDGLMGRAADAAGIQFRLLNRKKGPAVQGPRAQADRRLYRAAMQRFLLEQPGLDVVEGE 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V ++ + +++ D + + VVLT+GTFL G IHIG + P GRMGD PS L Sbjct: 125 VVDLLLDQGTATGVLLADGTRLDAKAVVLTSGTFLNGTIHIGHDRRPGGRMGDLPSIPLA 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 M + GRLKTGTP RLDG+TI W + E Q D + FSF+ RQI CGIT Sbjct: 185 QRLMDLNLSRGRLKTGTPPRLDGRTIDWTQLEMQPGDADPVMFSFLNHAPVARQISCGIT 244 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH I+ +N+ SA+Y G I+ GPRYCPSIEDKIVRF ++ GHQ+FLEPEGL+ Sbjct: 245 STNERTHEIVRDNLHQSAMYGGHIEGVGPRYCPSIEDKIVRFADKTGHQVFLEPEGLDDH 304 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNGIST+LP E+Q ++RTI GLE+V I++PGYAIEYDY +P+EL PTLE K + GL Sbjct: 305 TVYPNGISTSLPAEVQESYVRTIAGLEEVKILQPGYAIEYDYFDPRELRPTLEVKAMCGL 364 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGTTGYEEAAAQGL AG+N+A + + FSR+DSYIGVMIDDLTS+GV EP Sbjct: 365 YFAGQINGTTGYEEAAAQGLAAGLNAALAVRGREPLHFSRSDSYIGVMIDDLTSRGVTEP 424 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R+SLR DNAD RLT G+ LGC+G R+ F + + R++L+ ++L Sbjct: 425 YRMFTSRAEFRLSLRADNADQRLTQTGIDLGCVGPARRDAFLTKMDSLSRGRTMLQQVML 484 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 T +L+ I QDG R+A++ +++ + + + P+ + ++L ++ YA Sbjct: 485 TPTDLARLEIRISQDGTRRSAFDVMAFGEEAASAVERAVPELALLPHDIRQQLARDALYA 544 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 + RQ +EA+ +K +E IP DFDY SL LS+EL KL +P + QA+++EGMTP Sbjct: 545 QFIARQELEAQSLKRDEAVRIPSDFDYGSLSGLSHELTAKLLHARPATIAQAARLEGMTP 604 Query: 604 AALNLLLIYIKKNT 617 +AL L+L +++ + Sbjct: 605 SALMLILSRLRRAS 618 >gi|157803242|ref|YP_001491791.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rickettsia canadensis str. McKiel] gi|166200608|sp|A8EXC3|MNMG_RICCK RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|157784505|gb|ABV73006.1| glucose-inhibited division protein A [Rickettsia canadensis str. McKiel] Length = 624 Score = 628 bits (1620), Expect = e-178, Method: Compositional matrix adjust. Identities = 319/609 (52%), Positives = 424/609 (69%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAG EAAA +A+LG T LIT K +G MSCNPAIGG+ KG LV+EIDAL Sbjct: 4 YDVIVIGGGHAGVEAAAASARLGVPTLLITLKPGNLGEMSCNPAIGGIAKGILVKEIDAL 63 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGLMG V D AGI +++LN +GPAV GPR QADR+LY+ AM + + + NL+++ G+V Sbjct: 64 DGLMGYVIDQAGIHYKMLNETRGPAVWGPRAQADRKLYKKAMYQILTNYPNLNILYGKVE 123 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + + + ++V+ D S I C ++LTTG+FL G+IHIG KIPAGR+ + S L N+ Sbjct: 124 DIEIKSSKVKAVVLNDGSKIPCQKIILTTGSFLSGLIHIGSTKIPAGRVDEEASYGLSNT 183 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + F RLKTGTP R+DG TI + KT Q D+ PFS +T+ + QI C IT+T Sbjct: 184 LKRVGFKIARLKTGTPPRIDGLTIDYSKTVLQPGDKTPRPFSALTNIVDVPQINCFITKT 243 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 ETH II EN+ SA+YSG I++ GPRYCPSIEDKIVRF ++ H+IFLEPEGL+ + Sbjct: 244 TSETHDIIRENLDKSAMYSGQIEAIGPRYCPSIEDKIVRFSTKSEHRIFLEPEGLDDYTI 303 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YPNGIST+LPEE+Q + I+TIPGLEK I+RPGYAIEYDY++P+E+ TLETKKI GL+ Sbjct: 304 YPNGISTSLPEEVQCKLIKTIPGLEKATILRPGYAIEYDYVDPREISITLETKKIMGLYF 363 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAA QG+VAGIN+A +R +SYIGVMIDDLT G EPYR Sbjct: 364 AGQINGTTGYEEAAGQGIVAGINAALAVKNQPPFILTRANSYIGVMIDDLTIFGTKEPYR 423 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAEYR+SLR DNAD RLT +G+ +G + ++R++ F K R+LLK+L T+ Sbjct: 424 MFTSRAEYRLSLRADNADLRLTELGINIGVVSKKRKEIFKKKCYNIEKTRNLLKTLSFTT 483 Query: 486 KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAY 545 L + QDG +T + P+F+I+ I P ++ +S +++ L IE+ YA+Y Sbjct: 484 SKLVKIGVQVAQDGTYKTVLDLFKIPNFTIEQAIKIFPKLQEINSNILQLLYIEAKYASY 543 Query: 546 TGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAA 605 +Q + + EE +LIPK+ DY +P++S E++EKLS KP + A +I G+TPAA Sbjct: 544 LAKQQADINLFQNEEIQLIPKNIDYFKIPSISLEIREKLSYYKPTTIGIARRIPGITPAA 603 Query: 606 LNLLLIYIK 614 + ++IY+K Sbjct: 604 ITAIIIYLK 612 >gi|292571653|gb|ADE29568.1| Glucose-inhibited divisionprotein A [Rickettsia prowazekii Rp22] Length = 621 Score = 628 bits (1619), Expect = e-177, Method: Compositional matrix adjust. Identities = 317/609 (52%), Positives = 424/609 (69%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 Y VI+IGGGHAG EAAA +A+LG T LIT K +G MSCNPAIGG+ KG LV+EIDAL Sbjct: 4 YGVIIIGGGHAGVEAAAASARLGVHTLLITLKPENLGEMSCNPAIGGIAKGTLVKEIDAL 63 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGLMG V D +GI +++LN +GPAV GPR QADR+LY+ M + + + NLD++ +V Sbjct: 64 DGLMGFVIDKSGIHYKMLNETRGPAVWGPRAQADRKLYKKVMYQILTNYRNLDILYAKVE 123 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + + + ++++ + S I C VVLTTGTFL G IHIG +K+PAGR+ + PS L N+ Sbjct: 124 DIQIKSSKVEAVILSNGSKIFCQKVVLTTGTFLSGFIHIGSIKMPAGRIYEEPSYGLSNT 183 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + F RLKTGTP R+DG+TI + KT Q D+ PFS +TD I QI C IT+T Sbjct: 184 LKRLGFKIARLKTGTPPRIDGRTIDYSKTALQQGDQIPRPFSELTDVIDVPQINCFITKT 243 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 ETH II EN+ SA+YSG I+ GPRYCPSIEDKIV+F + H+IFLEPEGL + Sbjct: 244 TSETHDIIRENLDKSAMYSGQIEGIGPRYCPSIEDKIVKFSTKLEHRIFLEPEGLEDYTI 303 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YPNGIST+LPEE+Q++ I+TIPGLE ++RPGYAIEYDY++P+E+ TLETKKI+GL+ Sbjct: 304 YPNGISTSLPEEVQYKLIKTIPGLENAQVLRPGYAIEYDYVDPREINVTLETKKITGLYF 363 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAA QG++AGIN+A +R SYIGVMIDDLT+ G +EPYR Sbjct: 364 AGQINGTTGYEEAAGQGIIAGINAALSVKDQAPFILTRATSYIGVMIDDLTTFGTVEPYR 423 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSR+EYR+SLR DNAD RLT +G+K+G I E+R+K F K + + LL +L LT+ Sbjct: 424 MFTSRSEYRLSLRADNADLRLTELGIKIGVITEKRKKFFTKKCKNIEKTKLLLNNLSLTT 483 Query: 486 KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAY 545 L+ I QDGK +T + P F+++ I P +K ++ +++ L IE+ YA+Y Sbjct: 484 SKLAKMGIQVAQDGKYKTILDLFKIPSFNVEQAIKIFPILKKQNNNILQLLYIEAKYASY 543 Query: 546 TGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAA 605 RQ + + EE +LIPK+ DY +P++S E++EKLS KP + A +I G+TPA+ Sbjct: 544 LTRQYADINLFQSEELQLIPKNIDYFKIPSISLEIQEKLSYHKPATIGVARRISGITPAS 603 Query: 606 LNLLLIYIK 614 + ++IY+K Sbjct: 604 ITAIIIYLK 612 >gi|15603935|ref|NP_220450.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rickettsia prowazekii str. Madrid E] gi|6225445|sp|Q9ZE90|MNMG_RICPR RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|3860626|emb|CAA14527.1| GLUCOSE INHIBITED DIVISION PROTEIN A (gidA) [Rickettsia prowazekii] Length = 621 Score = 627 bits (1618), Expect = e-177, Method: Compositional matrix adjust. Identities = 317/609 (52%), Positives = 424/609 (69%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 Y VI+IGGGHAG EAAA +A+LG T LIT K +G MSCNPAIGG+ KG LV+EIDAL Sbjct: 4 YGVIIIGGGHAGVEAAAASARLGVHTLLITLKPENLGEMSCNPAIGGIAKGTLVKEIDAL 63 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGLMG V D +GI +++LN +GPAV GPR QADR+LY+ M + + + NLD++ +V Sbjct: 64 DGLMGFVIDKSGIHYKMLNETRGPAVWGPRAQADRKLYKKVMYQILTNYRNLDILYAKVE 123 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + + + ++++ + S I C VVLTTGTFL G IHIG +K+PAGR+ + PS L N+ Sbjct: 124 DIQIKSSKVEAVILSNGSKIFCQKVVLTTGTFLSGFIHIGSIKMPAGRIYEEPSYGLSNT 183 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + F RLKTGTP R+DG+TI + KT Q D+ PFS +TD I QI C IT+T Sbjct: 184 LKRLGFKIARLKTGTPPRIDGRTIDYSKTALQQGDQIPRPFSELTDVIDVPQINCFITKT 243 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 ETH II EN+ SA+YSG I+ GPRYCPSIEDKIV+F + H+IFLEPEGL + Sbjct: 244 TSETHDIIRENLDKSAMYSGQIEGIGPRYCPSIEDKIVKFSTKLEHRIFLEPEGLEDYTI 303 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YPNGIST+LPEE+Q++ I+TIPGLE ++RPGYAIEYDY++P+E+ TLETKKI+GL+ Sbjct: 304 YPNGISTSLPEEVQYKLIKTIPGLENAQVLRPGYAIEYDYVDPREINVTLETKKITGLYF 363 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAA QG++AGIN+A +R SYIGVMIDDLT+ G +EPYR Sbjct: 364 AGQINGTTGYEEAAGQGIIAGINAALSVKDQAPFILTRATSYIGVMIDDLTTFGTVEPYR 423 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSR+EYR+SLR DNAD RLT +G+K+G I E+R+K F K + + LL +L LT+ Sbjct: 424 MFTSRSEYRLSLRADNADLRLTELGIKIGVITEKRKKFFTKKCKNIEKTKLLLNNLSLTT 483 Query: 486 KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAY 545 L+ I QDGK +T + P F+++ I P +K ++ +++ L IE+ YA+Y Sbjct: 484 SKLAKMGIQVAQDGKYKTILDLFKIPSFNVEQAIKIFPILKKQNNNILQLLYIEAKYASY 543 Query: 546 TGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAA 605 RQ + + EE +LIPK+ DY +P++S E++EKLS KP + A +I G+TPA+ Sbjct: 544 LTRQYADINLFQSEEIQLIPKNIDYFKIPSISLEIQEKLSYHKPATIGVARRISGITPAS 603 Query: 606 LNLLLIYIK 614 + ++IY+K Sbjct: 604 ITAIIIYLK 612 >gi|209966079|ref|YP_002298994.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rhodospirillum centenum SW] gi|209959545|gb|ACJ00182.1| glucose-inhibited division protein A [Rhodospirillum centenum SW] Length = 619 Score = 626 bits (1615), Expect = e-177, Method: Compositional matrix adjust. Identities = 326/614 (53%), Positives = 421/614 (68%), Gaps = 1/614 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 RS+DVIV+GGGHAGCEAAA AA++GA TAL+TH+ TIG MSCNPAIGGLGKGHLVREID Sbjct: 2 RSFDVIVVGGGHAGCEAAAAAARMGARTALLTHRIETIGEMSCNPAIGGLGKGHLVREID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDGLM RV D GIQFRVLN KGPAVRGPR QADR LYR AMQ + +Q LD+I Sbjct: 62 ALDGLMARVIDQGGIQFRVLNRSKGPAVRGPRAQADRRLYREAMQAALRAQPGLDLIAAA 121 Query: 124 VAGFNTEK-NIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 V + + D IR VVLTTGTFLRG+IHIG+ +IPAGR+G++P+ L Sbjct: 122 VEDLLLDAAGACCGVRTADGEEIRAGAVVLTTGTFLRGLIHIGERRIPAGRVGEAPALGL 181 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGI 242 ++ + F GRLKTGTPARLDG++I W E Q D+ PFS +T++IT Q+ C I Sbjct: 182 SDTLARLGFPLGRLKTGTPARLDGRSIDWAGLESQPGDDPPPPFSTLTERITTPQVACAI 241 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T T H +I N+ + IYSG I+S GPRYCPSIEDK+VRF ++ HQIFLEPEGL+ Sbjct: 242 TWTTPAVHALIRANLHRAPIYSGQIESTGPRYCPSIEDKVVRFADKERHQIFLEPEGLDD 301 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 D VYPNGIST+LPEE+Q + + IPGLE+ ++RPGYAIEYD+++P+EL TLETK++ Sbjct: 302 DTVYPNGISTSLPEEVQREMLAAIPGLERAVMLRPGYAIEYDFVDPRELTATLETKRLPR 361 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LFLAGQINGTTGYEEAAAQGL+AG+N+A + R + YIGV+IDDL ++G E Sbjct: 362 LFLAGQINGTTGYEEAAAQGLMAGVNAALAVAGGEPFVLDRAEGYIGVLIDDLITRGTTE 421 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLTP G+ +G +G RR + F + R+L SL Sbjct: 422 PYRMFTSRAEYRLLLRADNADQRLTPRGLSVGVVGSRRAEAFQQKADALAAARALATSLA 481 Query: 483 LTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSY 542 T L+ I +DG RT + L YP+ I L ++ P+ + + E+++I+ Y Sbjct: 482 ATPNELARHGIHVNRDGVRRTVLDLLRYPEVDIARLAAVWPELAALPAAIAEQVEIDGKY 541 Query: 543 AAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMT 602 A Y RQ + + + +E +P D D ++ +LS E+++KL ++P L A++I GMT Sbjct: 542 AGYLERQEADIRAFRKDEALGLPADLDPDAIASLSAEIRQKLRQVRPATLGAAARIPGMT 601 Query: 603 PAALNLLLIYIKKN 616 PAAL LL ++K+ Sbjct: 602 PAALTALLRHVKRR 615 >gi|255263837|ref|ZP_05343179.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Thalassiobium sp. R2A62] gi|255106172|gb|EET48846.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Thalassiobium sp. R2A62] Length = 620 Score = 623 bits (1606), Expect = e-176, Method: Compositional matrix adjust. Identities = 317/612 (51%), Positives = 425/612 (69%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DV+V+GGGHAGC+AA+ +A+ GA T L+T K + IG MSCNPAIGGLGKGHLVREID Sbjct: 2 KQFDVVVVGGGHAGCDAASASARAGARTLLVTLKLADIGVMSCNPAIGGLGKGHLVREID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G+MGRVAD AGIQFR+LN +KGPAV+GPR QADR++YR M E+ +Q+NL++ + E Sbjct: 62 ALGGVMGRVADKAGIQFRLLNRRKGPAVQGPRAQADRKIYRETMLCEMKAQQNLELCEAE 121 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 VA + ++ + + D ++I +VVLT GTFLRG IHIG GRMGD+P+ L Sbjct: 122 VAALEIDAGEVTGVKLADGTVISAYSVVLTAGTFLRGKIHIGPESRSGGRMGDAPAIKLA 181 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 F+ GRLKTGTP RLDGKTI WD ++Q D FSF T QI CG+T Sbjct: 182 EQIDSLGFELGRLKTGTPPRLDGKTINWDGLDRQDGDNEPSFFSFSTRSTDTPQISCGVT 241 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH II +N+ SA+Y G I GPRYCPSIEDK+VRF E++ HQIFLEPE L+ + Sbjct: 242 HTNEQTHDIIQKNLDKSAMYGGQIDGVGPRYCPSIEDKVVRFAEKSSHQIFLEPESLSDN 301 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 V+YPNGIST+LP ++Q+ ++ +I GLEK I++ GYAIEYDY++P+ L TLET+++ GL Sbjct: 302 VIYPNGISTSLPLDVQYDYVHSIFGLEKAVILQAGYAIEYDYLDPRGLRSTLETREMPGL 361 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 +LAGQINGTTGYEEAAAQGLVAG+NSA ++ + F R +SYIGVMIDDLT++GV EP Sbjct: 362 YLAGQINGTTGYEEAAAQGLVAGLNSALRAQNKEQQTFDRVNSYIGVMIDDLTTRGVTEP 421 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R++LR DNAD RL+P + LG +GER+ F + +S+L + Sbjct: 422 YRMFTSRAEFRLTLRADNADQRLSPRAIHLGLLGERQAASFLEKQDALARAKSILDEATV 481 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 T++ L S + DG+ RTA+ LS P+ S+ ++ + P + + ++ ++ Y Sbjct: 482 TARQLHSVGVDINPDGRRRTAFSALSIPNVSLDHVRLVVPALSRVKEEIQVQISKDALYF 541 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y RQM +A ++ E+K IP ++ + LSNEL KL KP NL QA +IEGMTP Sbjct: 542 QYVERQMRDALALEKEKKTKIPDTMIFAGMNGLSNELAVKLDRAKPENLGQAGRIEGMTP 601 Query: 604 AALNLLLIYIKK 615 AAL L+L +++ Sbjct: 602 AALTLILSKLRQ 613 >gi|159045995|ref|YP_001534789.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Dinoroseobacter shibae DFL 12] gi|189039340|sp|A8LPC3|MNMG_DINSH RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|157913755|gb|ABV95188.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Dinoroseobacter shibae DFL 12] Length = 619 Score = 621 bits (1601), Expect = e-175, Method: Compositional matrix adjust. Identities = 324/603 (53%), Positives = 417/603 (69%), Gaps = 3/603 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M +++DVIVIGGGHAG EAAA AA+LG ALIT + S IG MSCNPAIGGLGKGHLVR Sbjct: 1 MKQQAFDVIVIGGGHAGTEAAAAAARLGVQVALITLERSGIGVMSCNPAIGGLGKGHLVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDA+DG+MGRVAD AGIQFR+LN +KGPAV+GPR+Q+DR++YR M E+ S NL ++ Sbjct: 61 EIDAMDGVMGRVADKAGIQFRLLNRRKGPAVQGPRSQSDRDVYRSEMLAEMESLPNLRIL 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 +GEVA T I + + D S + VV+TTGTFLRG+IHIG GRMG +PS Sbjct: 121 EGEVADLITSGTRIEGVCLADGSEVTARAVVVTTGTFLRGIIHIGNRSFQGGRMGAAPSV 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 L F F GRLKTGTP RLD ++I WDK E Q DE FSF++ RQ+ C Sbjct: 181 RLAERFDSFGLPLGRLKTGTPPRLDKRSIAWDKLEPQPGDEDPTLFSFLSAGPHLRQVHC 240 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +T TN TH II +N+ SA+Y G I+ GPRYCPSIEDK+VRF ++ HQIFLEPEGL Sbjct: 241 AVTHTNERTHEIIRKNLSRSAMYGGSIEGVGPRYCPSIEDKVVRFSDKTSHQIFLEPEGL 300 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 ++ +YPNGIST+LPE++Q ++R+I GLE I +PGYAIEYDY++P+ L L K Sbjct: 301 DSTTIYPNGISTSLPEDVQEAYVRSISGLENAKITQPGYAIEYDYVDPRALDAALRVKGF 360 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GL+LAGQINGTTGYEEAAAQGLVAG+N+A + SR SYIGVMIDDL ++GV Sbjct: 361 DGLYLAGQINGTTGYEEAAAQGLVAGLNAALEGK--GKFLPSRMTSYIGVMIDDLITQGV 418 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+SLR DNAD RLTP G+ LGC+G+ R+ +F K + + LKS Sbjct: 419 AEPYRMFTSRAEYRLSLRCDNADQRLTPEGLVLGCVGKERRIKFEKKMGLLDETLKKLKS 478 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 +T K + I +DG+ R+ + LS + S ++L + P+ + S+ + ++ +IE+ Sbjct: 479 FEVTPKQANEAGIRVNEDGRRRSGLDLLSLSNVSYESLAATWPELQA-STEIAKQAKIEA 537 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 +YA Y RQ + +K +E+ P FD+S L LSNELK KL+ ++P L QA++IEG Sbjct: 538 TYANYIERQQRDVMALKKDEEIEFPPRFDFSGLSGLSNELKSKLTAVRPSTLGQAARIEG 597 Query: 601 MTP 603 MTP Sbjct: 598 MTP 600 >gi|262277800|ref|ZP_06055593.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [alpha proteobacterium HIMB114] gi|262224903|gb|EEY75362.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [alpha proteobacterium HIMB114] Length = 619 Score = 620 bits (1599), Expect = e-175, Method: Compositional matrix adjust. Identities = 317/614 (51%), Positives = 418/614 (68%), Gaps = 1/614 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DV+VIG GHAGCEAAA +A++ +TAL+T ++IG MSCNPAIGGLGKGHLVREIDA Sbjct: 4 FDVVVIGAGHAGCEAAAASARMKVNTALVTTNENSIGEMSCNPAIGGLGKGHLVREIDAF 63 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DG+M +VADA+GIQFR+LN +GPAVRGPRTQ+DR+LY+ M+ ++S NL + V Sbjct: 64 DGVMPKVADASGIQFRLLNRSRGPAVRGPRTQSDRKLYKKYMKECLISHCNLSIFYDPVI 123 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 F +N I ++++ +R +VLTTGTFL GVIHIG P GR G+ P+ L Sbjct: 124 QFIFNENEIVGLILKSGKELRAKKIVLTTGTFLNGVIHIGDEMKPGGRHGEDPTTGLSEQ 183 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 KF+ + RLKTGTP RLDG+TI ++ E+Q AD+ FS + +I Q+ C +T T Sbjct: 184 LKKFNLNLSRLKTGTPPRLDGRTINFEILEEQKADDDPYFFSVDSKQINVDQVSCFMTYT 243 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N E H+II +N+K SA+YSG+IKS GPRYCPSIEDKIV+F +++ HQIFLEPEGL+ + Sbjct: 244 NDEVHKIIEKNLKRSAMYSGNIKSVGPRYCPSIEDKIVKFKDKSRHQIFLEPEGLDDHTI 303 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YPNGIST+LP + Q + + I GL V +IRPGYAIEYDY++P+EL TLE KKI LFL Sbjct: 304 YPNGISTSLPADAQEEILFKINGLSNVKMIRPGYAIEYDYVDPRELNATLELKKIKSLFL 363 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAAAQGL+AGIN+A +S R+ +YIGVMIDDL +KGV EPYR Sbjct: 364 AGQINGTTGYEEAAAQGLIAGINAALQSKNKKPFILDRSQAYIGVMIDDLVTKGVAEPYR 423 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAEYR++LR DNAD RL+ I L + E R F K ++ N L+ L S T Sbjct: 424 MFTSRAEYRLTLRADNADLRLSSIAKDLEILSESRLLNFEKKLENINKLKVQLSSRSFTP 483 Query: 486 KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAY 545 I +DG R E L Y + L I + VIE+++I++ Y+ Y Sbjct: 484 NEAVKYGIKISKDGVKRNGLELLRYKGVTFDKLKPIF-GLGDYDRDVIEQIEIDNHYSGY 542 Query: 546 TGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAA 605 +Q+ + + K +E IP++ DYS++ LSNE+++KL +++P QAS+IEG+TPAA Sbjct: 543 YAKQVDDIEIFKKDENMKIPENIDYSAISGLSNEIRQKLELIRPKTFGQASRIEGITPAA 602 Query: 606 LNLLLIYIKKNTVK 619 +NLLL Y K+ K Sbjct: 603 INLLLTYSKRYNFK 616 >gi|77464807|ref|YP_354311.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rhodobacter sphaeroides 2.4.1] gi|123590765|sp|Q3IYH4|MNMG_RHOS4 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|77389225|gb|ABA80410.1| Glucose-inhibited division protein, A family [Rhodobacter sphaeroides 2.4.1] Length = 626 Score = 620 bits (1599), Expect = e-175, Method: Compositional matrix adjust. Identities = 327/612 (53%), Positives = 421/612 (68%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DV+VIGGGHAGCEAAA AA++G AL T + S +G MSCNPAIGGLGKGHLVREID Sbjct: 7 KHFDVVVIGGGHAGCEAAAAAARMGVQVALFTLRKSGLGVMSCNPAIGGLGKGHLVREID 66 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDG+MGR AD AGIQFR+LN KKGPAV+GPR QADR LYR A+QR + +Q L VI+GE Sbjct: 67 ALDGIMGRAADEAGIQFRLLNRKKGPAVQGPRAQADRRLYREAVQRLLAAQPGLTVIEGE 126 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + + + D + + V+LT+GTFL G+IHIG + P GRMGD PS L Sbjct: 127 VVDLQVNGGRVQGVSLADGTSVWAGRVILTSGTFLNGIIHIGDQRRPGGRMGDDPSQRLA 186 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + GRLKTGTP RLDG+TI W + E Q DE + FSF+ RQI CGIT Sbjct: 187 AVLGELSLARGRLKTGTPPRLDGRTIRWTELEMQPGDEDPVVFSFLNRAPKARQIACGIT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH+I+ +N+ SA+Y G I+ GPRYCPSIEDKIVRF ++ HQ+FLEPEGL+ D Sbjct: 247 HTNARTHQIVRDNLSRSAMYGGHIEGVGPRYCPSIEDKIVRFADKEAHQVFLEPEGLDDD 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNGIST+LP E+Q ++RTI GLE V I++PGYAIEYDY +P+EL PTLE K + GL Sbjct: 307 TVYPNGISTSLPAEVQEAYVRTIAGLEDVRILQPGYAIEYDYFDPRELRPTLEVKALGGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGTTGYEEAAAQGL AG+N+A + + + FSR+ SY+GVMIDDLTS+GV EP Sbjct: 367 YFAGQINGTTGYEEAAAQGLAAGLNAALSIREREPLHFSRSGSYLGVMIDDLTSRGVTEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R+SLR DNAD RLTPIG+ LGC+ + R++ F + + R+LL+ Sbjct: 427 YRMFTSRAEFRLSLRADNADQRLTPIGLDLGCVSDARRESFNRKRELLEKGRALLEGSSF 486 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 T L+ I QDG RTA+ +++ + + + + ++L + YA Sbjct: 487 TPSQLNELGIQVSQDGMRRTAFAVMAFGEEAASAVARGVEGYGDLPEEIRQQLAKDGLYA 546 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 + RQ EA +K +E IP DFDY+ L LS+ELK KL +P + QA+++EGMTP Sbjct: 547 QFILRQEEEAAALKRDEAIRIPADFDYAPLSGLSSELKSKLMRARPSTIAQAAQLEGMTP 606 Query: 604 AALNLLLIYIKK 615 +AL L+L +++ Sbjct: 607 SALTLILARLRR 618 >gi|304320460|ref|YP_003854103.1| glucose-inhibited division protein A [Parvularcula bermudensis HTCC2503] gi|303299362|gb|ADM08961.1| glucose-inhibited division protein A [Parvularcula bermudensis HTCC2503] Length = 623 Score = 619 bits (1596), Expect = e-175, Method: Compositional matrix adjust. Identities = 333/609 (54%), Positives = 419/609 (68%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAG EAAA AA+ GA TALITHK ++IG MSCNPAIGGLGKGHLVREIDAL Sbjct: 7 YDVIVVGGGHAGTEAAAAAARSGAQTALITHKAASIGEMSCNPAIGGLGKGHLVREIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGLMGR AD GIQFR+LN KGPAVRGPRTQADR YR A+Q + E++ +I+ EVA Sbjct: 67 DGLMGRAADRGGIQFRMLNRSKGPAVRGPRTQADRFHYRTAVQDLLAELEDISLIEAEVA 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + +V+ D + ++VVLTTGTFLRGVIH G +IPAGR GD + +L Sbjct: 127 DLIVSNGHVMGVVLSDGREVSATSVVLTTGTFLRGVIHRGTERIPAGRYGDQAATALGER 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 GRLKTGTPARL +I W + E Q ADE +PFSF+T+ + QI CGIT T Sbjct: 187 LEALALPLGRLKTGTPARLVKTSIDWSRLETQEADEAPVPFSFLTETLPLPQIACGITAT 246 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 ETHRII +N+ SA+YSG I S GPRYCPSIEDKIVRF +R+ HQIFLEPEGL+ V Sbjct: 247 TAETHRIIADNLHQSAVYSGAIGSKGPRYCPSIEDKIVRFPDRSSHQIFLEPEGLDEPWV 306 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YPNGIST+LP+++Q IR+IPGLE I R GYAIEYDY++P+ L +LE + + GLFL Sbjct: 307 YPNGISTSLPDQVQEALIRSIPGLEGAEIARYGYAIEYDYVDPRALSHSLELRALPGLFL 366 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEA AQGL+AG+N++R++ L + R ++YIGV+IDDL + GV EPYR Sbjct: 367 AGQINGTTGYEEAGAQGLIAGLNASRRARGLSPVWLERREAYIGVLIDDLVTHGVTEPYR 426 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAEYR+SLR DNAD RLTP G +G R++ F + RS+L +T Sbjct: 427 MFTSRAEYRLSLRADNADLRLTPRGQTWDLVGPARREMFHMKQERVARARSILTETSVTP 486 Query: 486 KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAY 545 + IS +DG+ R + L+ P + L S+ PD + + L+ ++ Y+ Y Sbjct: 487 QEAEEAGISVNKDGRRRRLLDLLALPIVEFEQLSSLHPDIPSIGADLRPILEADALYSGY 546 Query: 546 TGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAA 605 RQ E +K EE +IP DF Y +P LS EL+EKL ++P +L QA++IEG+TPAA Sbjct: 547 LDRQEAEIVALKKEEDTVIPADFRYDLVPGLSAELREKLDRIRPHHLGQAARIEGVTPAA 606 Query: 606 LNLLLIYIK 614 L LLL+ +K Sbjct: 607 LALLLVTLK 615 >gi|332559703|ref|ZP_08414025.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rhodobacter sphaeroides WS8N] gi|332277415|gb|EGJ22730.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rhodobacter sphaeroides WS8N] Length = 597 Score = 616 bits (1588), Expect = e-174, Method: Compositional matrix adjust. Identities = 311/589 (52%), Positives = 400/589 (67%) Query: 27 LGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVK 86 +G ALIT + S +G MSCNPAIGGLGKGHLVREIDALDG+MGR AD AGIQFR+LN K Sbjct: 1 MGVQVALITLRKSGLGVMSCNPAIGGLGKGHLVREIDALDGIMGRAADEAGIQFRLLNRK 60 Query: 87 KGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIR 146 KGPAV+GPR QADR LYR A+QR + +Q L VI+GEV + + + D + + Sbjct: 61 KGPAVQGPRAQADRRLYREAVQRLLAAQPGLTVIEGEVVDLQVNGGRVQGVSLADGTSVW 120 Query: 147 CSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDG 206 V+LT+GTFL G+IHIG + P GRMGD PS L + GRLKTGTP RLDG Sbjct: 121 AGRVILTSGTFLNGIIHIGDQRRPGGRMGDDPSQRLAAVLGELSLARGRLKTGTPPRLDG 180 Query: 207 KTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGD 266 +TI W + E Q DE + FSF+ RQI CGIT TN TH+I+ +N+ SA+Y G Sbjct: 181 RTIRWTELEMQPGDEDPVVFSFLNRAPKARQIACGITHTNARTHQIVRDNLSRSAMYGGH 240 Query: 267 IKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTI 326 I+ GPRYCPSIEDKIVRF ++ HQ+FLEPEGL+ D VYPNGIST+LP E+Q ++RTI Sbjct: 241 IEGVGPRYCPSIEDKIVRFADKEEHQVFLEPEGLDDDTVYPNGISTSLPAEVQEAYVRTI 300 Query: 327 PGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAG 386 GLE V I++PGYAIEYDY +P+EL PTLE K + GL+ AGQINGTTGYEEAAAQGL AG Sbjct: 301 AGLEDVRILQPGYAIEYDYFDPRELRPTLEVKALGGLYFAGQINGTTGYEEAAAQGLAAG 360 Query: 387 INSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRL 446 +N+A + + FSR+ SY+GVMIDDLTS+GV EPYRMFTSRAE+R+SLR DNAD RL Sbjct: 361 LNAALSIRDREPLHFSRSGSYLGVMIDDLTSRGVTEPYRMFTSRAEFRLSLRADNADQRL 420 Query: 447 TPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYE 506 TPIG+ LGC+ + R++ F + + R+LL+ T L+ I QDG RTA+ Sbjct: 421 TPIGLDLGCVSDARRESFNRKREMLEKGRALLEGSSFTPSKLNELGIQVSQDGMRRTAFA 480 Query: 507 FLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPK 566 +++ + + + + ++L + YA + RQ EA +K +E IP Sbjct: 481 VMAFGEEAASAVARGVEGYGDLPEEIRQQLAKDGLYAQFILRQEEEAAALKRDEAIRIPA 540 Query: 567 DFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 DFDY+ L LS+ELK KL +P + QA+++EGMTP+AL L+L +++ Sbjct: 541 DFDYAPLSGLSSELKSKLMRARPSTIAQAAQLEGMTPSALTLILARLRR 589 >gi|221640726|ref|YP_002526988.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Rhodobacter sphaeroides KD131] gi|221161507|gb|ACM02487.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Rhodobacter sphaeroides KD131] Length = 597 Score = 614 bits (1584), Expect = e-173, Method: Compositional matrix adjust. Identities = 314/593 (52%), Positives = 404/593 (68%), Gaps = 6/593 (1%) Query: 27 LGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVK 86 +G ALIT + S +G MSCNPAIGGLGKGHLVREIDALDG+MGR AD AGIQFR+LN K Sbjct: 1 MGVRVALITLRMSGLGVMSCNPAIGGLGKGHLVREIDALDGIMGRAADEAGIQFRLLNRK 60 Query: 87 KGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIR 146 KGPAV+GPR QADR LYR A+QR + Q L V++GEV + + + D + + Sbjct: 61 KGPAVQGPRAQADRRLYREAVQRLLAEQPGLTVVEGEVVDLQVIGGRVQGVSLADGTSVG 120 Query: 147 CSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDG 206 V+LT+GTFL GVIHIG + P GRMGD PS L + GRLKTGTP RLDG Sbjct: 121 AGRVILTSGTFLNGVIHIGDQRRPGGRMGDDPSQRLAAVLGELSLARGRLKTGTPPRLDG 180 Query: 207 KTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGD 266 +TI W + E Q DE + FSF+ RQI CGIT TN TH+I+ +N+ SA+Y G Sbjct: 181 RTIRWTELEMQPGDEDPVVFSFLNRAPKARQIACGITHTNARTHQIVRDNLSRSAMYGGH 240 Query: 267 IKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTI 326 I+ GPRYCPSIEDKIVRF ++ HQ+FLEPEGL+ D VYPNGIST+LP E+Q ++ TI Sbjct: 241 IEGVGPRYCPSIEDKIVRFADKEEHQVFLEPEGLDDDTVYPNGISTSLPAEVQEAYVHTI 300 Query: 327 PGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAG 386 GLE V I++PGYAIEYDY +P+EL PTLE K ++GL+ AGQINGTTGYEEAAAQGL AG Sbjct: 301 AGLEDVRILQPGYAIEYDYFDPRELRPTLEVKALAGLYFAGQINGTTGYEEAAAQGLAAG 360 Query: 387 INSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRL 446 +N+A + + I FSR+ SY+GVMIDDLT++GV EPYRMFTSRAE+R+SLR DNAD RL Sbjct: 361 LNAALSIREREPIYFSRSGSYLGVMIDDLTTRGVTEPYRMFTSRAEFRLSLRADNADQRL 420 Query: 447 TPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYE 506 TPIG+ LGC+ E R+ F++ + + LL+ T L+ I QDG RTA+ Sbjct: 421 TPIGLDLGCVSEARRDSFSRKREMLEKGKGLLECSTFTPSQLNDLGIKVSQDGVRRTAFA 480 Query: 507 FLSYPDFSIQNLFSICPDARKFSSL---VIERLQIESSYAAYTGRQMIEAKEIKFEEKRL 563 ++Y D + ++ +S L + ++L + YA + RQ EA +K +E Sbjct: 481 VMAYGD---EAAVAVEKGVEGYSDLPEEIRQQLAKDGIYAQFILRQEEEAAALKRDEAIR 537 Query: 564 IPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKN 616 IP +FDY+ L LS+ELK KL KP + QA+++EGMTP+AL L+L ++++ Sbjct: 538 IPAEFDYAPLSGLSSELKAKLMRAKPSTIAQAAQLEGMTPSALTLILARLRRS 590 >gi|83594954|ref|YP_428706.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rhodospirillum rubrum ATCC 11170] gi|123525453|sp|Q2RN76|MNMG_RHORT RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|83577868|gb|ABC24419.1| Glucose-inhibited division protein A subfamily [Rhodospirillum rubrum ATCC 11170] Length = 629 Score = 614 bits (1583), Expect = e-173, Method: Compositional matrix adjust. Identities = 322/623 (51%), Positives = 410/623 (65%), Gaps = 14/623 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +DVIV+GGGHAG EAAA AA+LGA T L THK T+G+MSCNPAIGGL KGHLVRE Sbjct: 1 MTNHWDVIVVGGGHAGTEAAAAAARLGAKTLLATHKLETVGTMSCNPAIGGLAKGHLVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDALDG+MGR D GIQFR+LN KGPAVRGPR QADR LY A++ + Q L Sbjct: 61 IDALDGVMGRAIDRGGIQFRILNRSKGPAVRGPRAQADRALYAQAVRAILADQPGL---- 116 Query: 122 GEVAGFNTEKNII------SSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMG 175 +A E +I + ++ + + R VVLTTGTFLRGVIHIG PAGR+G Sbjct: 117 -TLAALAIEDLLIGNDGRCAGVIDAEGGVHRAGAVVLTTGTFLRGVIHIGTQTTPAGRIG 175 Query: 176 DSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN 235 ++P+ L + + F GRLKTGTP RLDG+TI W E Q DE PFSF+T IT Sbjct: 176 EAPALGLSATLARLGFPLGRLKTGTPPRLDGRTIAWATLESQPGDEPPPPFSFLTTAITT 235 Query: 236 RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFL 295 QI C IT T ETHR+I EN+ + +YSG I+ GPRYCPSIEDK+VRF +R+ HQIFL Sbjct: 236 PQISCAITETTAETHRVIRENLHRAPLYSGQIQGVGPRYCPSIEDKVVRFADRDRHQIFL 295 Query: 296 EPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTL 355 EPEGL+ VYPNGIST+LP ++Q + TIPGLEK ++RPGYAIEYD+++P+ L PTL Sbjct: 296 EPEGLDDPTVYPNGISTSLPIDVQLALLATIPGLEKAEMMRPGYAIEYDFVDPRCLGPTL 355 Query: 356 ETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSAR---KSNKLDCICFSRTDSYIGVMI 412 ET ++ GLFLAGQINGTTGYEEAAAQGL+AG+N+AR + I F R + Y+GV++ Sbjct: 356 ETDRLPGLFLAGQINGTTGYEEAAAQGLIAGLNAARVAGAGERAAPITFDRAEGYLGVLV 415 Query: 413 DDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYN 472 DDL + G EPYRMFTSRAEYR+ LR DNAD RLT G+ LGC+G R F Sbjct: 416 DDLITLGTTEPYRMFTSRAEYRLLLRADNADLRLTAKGIALGCVGAARTAAFEDKRAALT 475 Query: 473 FLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV 532 R+++ L LT +L+ I+ QDG+ RT + L + D L ++ P+ V Sbjct: 476 AARTMIDGLALTPPDLARRGIAVNQDGQRRTPLDLLCHADIDWARLVALWPELGAIRPDV 535 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 E+L+I + YA Y R + + +E ++P D Y L LS EL+ KL++ +P L Sbjct: 536 AEQLEIGARYAGYLERMHGDVAAFRRDEALVLPADLAYDGLANLSAELRGKLTLARPATL 595 Query: 593 LQASKIEGMTPAALNLLLIYIKK 615 A++I GMTPAAL LL ++K+ Sbjct: 596 GAAARIPGMTPAALTALLRHVKR 618 >gi|58039526|ref|YP_191490.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Gluconobacter oxydans 621H] gi|81170545|sp|Q5FS12|MNMG_GLUOX RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|58001940|gb|AAW60834.1| Glucose inhibited division protein A [Gluconobacter oxydans 621H] Length = 618 Score = 607 bits (1566), Expect = e-171, Method: Compositional matrix adjust. Identities = 299/613 (48%), Positives = 395/613 (64%), Gaps = 5/613 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAGCEAAA +A+ GA T L+TH+ TIG+MSCNPAIGG+GKGHLVREIDAL Sbjct: 4 FDVIVIGGGHAGCEAAAASARFGARTLLLTHRLETIGAMSCNPAIGGIGKGHLVREIDAL 63 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGLMG+ AD AGI F++LN KGPAV GPR QADR LYR A+Q + + NL +++G Sbjct: 64 DGLMGKAADRAGIHFKLLNRSKGPAVHGPRAQADRSLYRAAIQDLLAATPNLTILEGAAG 123 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E I+ ++ +D RC VVLTTGTFLRGVIH+G + AGR+G++P+ L Sbjct: 124 DLIEENGRITGVICEDGREFRCGAVVLTTGTFLRGVIHVGHTQTEAGRIGEAPAKRLGER 183 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 GRLKTGTP RL +I WD D FS MT I N Q+ C I+ T Sbjct: 184 LYALGLQMGRLKTGTPPRLARDSIDWDNLPADPGDAEPEAFSPMTTAIINPQVVCRISHT 243 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL----N 301 ETHRII EN+ SA+Y G I GPRYCPSIEDK+VRF ER HQ+FLEPE L Sbjct: 244 TAETHRIINENLHRSAMYGGAIAGRGPRYCPSIEDKVVRFAERTSHQVFLEPEALPGNPG 303 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 D+VYPNGIST+LP ++Q I T+PGLE I+ GYA+EYDY++P+EL P+L+ +++ Sbjct: 304 GDLVYPNGISTSLPADVQAAMIATMPGLENARIVTAGYAVEYDYVDPRELLPSLQLRRLP 363 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GL+LAGQINGTTGYEEA AQGL+AG+N+AR + + + R+D+Y+GVMIDDLT G+ Sbjct: 364 GLYLAGQINGTTGYEEAGAQGLLAGLNAARATAGNEPLTLDRSDAYLGVMIDDLTLHGIS 423 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR++LR DNAD RLTP G+ GC+ R+ F E + + Sbjct: 424 EPYRMFTSRAEYRLTLRADNADLRLTPKGIAAGCVLPEREAAFTAQKAELDAAMARAAET 483 Query: 482 VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 + L DG+ RT + L+ + L ++ P + V ++ E+ Sbjct: 484 TFLPQTLRDVGFEVSLDGRRRTVLDVLAS-NGDHTKLDTLAPWFAELPLRVRRHVETEAR 542 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y RQ E +++ E +P D DY+++ LS+E++E+ S +P + A ++ G+ Sbjct: 543 YDGYLHRQDREIRQLASESAIALPADLDYTAIGGLSSEMRERFSQARPTSFAAAQRVRGV 602 Query: 602 TPAALNLLLIYIK 614 TPAAL LL +++ Sbjct: 603 TPAALVALLAHVR 615 >gi|307297009|ref|ZP_07576825.1| glucose inhibited division protein A [Sphingobium chlorophenolicum L-1] gi|306877535|gb|EFN08763.1| glucose inhibited division protein A [Sphingobium chlorophenolicum L-1] Length = 616 Score = 606 bits (1563), Expect = e-171, Method: Compositional matrix adjust. Identities = 300/614 (48%), Positives = 407/614 (66%), Gaps = 1/614 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+GGGHAGCEAA+ AA+ GAS AL+T + +T+G+MSCNPAIGGLGKGHLVRE+DA Sbjct: 4 SYDVIVVGGGHAGCEAASAAARKGASVALLTFEKATVGAMSCNPAIGGLGKGHLVREVDA 63 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGL+GR ADAA I +R+LN KG AV+GPR QADR+ YR + R + +Q LD+I+GE Sbjct: 64 LDGLIGRAADAAAIHYRMLNSSKGAAVQGPRIQADRKRYRAEIHRLLDAQTGLDIIEGEA 123 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 A ++ I+ + + D + TVVL TGTFL G + G+ GR G+ + +L Sbjct: 124 AQLLLSQDKIAGLALADGRTLSAPTVVLATGTFLGGKLFRGEETTIGGRTGERAATTLGV 183 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 D GRLKTGTP RLDG+TI W + E+Q +D S ++ Q+ C ITR Sbjct: 184 QLRALDLPIGRLKTGTPPRLDGRTIDWARLEEQPSDGGSWTMSALSPARILPQLSCAITR 243 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II E + S ++SG I+ GPRYCPSIEDK++RFG+R+GHQIFLEPEGL T++ Sbjct: 244 TNDRTHAIIREGLGRSPLFSGAIEGRGPRYCPSIEDKVIRFGDRDGHQIFLEPEGLETNL 303 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LP ++Q + IR++ GLE I+ PGYA+EYD+I+P+ L TLE + I GLF Sbjct: 304 VYPNGISTSLPADVQREMIRSMAGLEAAEIVVPGYAVEYDHIDPRALDATLEVRAIRGLF 363 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGLVAG+N+A + + + R SYIGVMIDDL +GV EPY Sbjct: 364 CAGQINGTTGYEEAAAQGLVAGVNAAAYARGEEPLILDRASSYIGVMIDDLVLQGVTEPY 423 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM T+RAEYR+ LR DNA RL PIG + + R +A E L L+ Sbjct: 424 RMLTARAEYRLRLRADNAGTRLAPIGHRHAILNAERIAHYAARNAERGRAEEELNR-SLS 482 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + ++ + +QDG R+ +E+ +P+ S + LF++ P S V + + ++ YA Sbjct: 483 ATEMARAGAAVRQDGARRSLFEWARFPEVSRELLFTLAPALSNISPDVRDEILEDAHYAP 542 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ E E++ E+ +IP DFD++S+ LS E+ E+L++ +P L A +I G+TPA Sbjct: 543 YLDRQDTEIAEMRRNERVVIPADFDFASVGGLSTEMIERLNMARPDTLAAAGRIRGITPA 602 Query: 605 ALNLLLIYIKKNTV 618 AL +L++I++ Sbjct: 603 ALAAVLVHIRRRAA 616 >gi|330991276|ref|ZP_08315227.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [Gluconacetobacter sp. SXCC-1] gi|329761295|gb|EGG77788.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [Gluconacetobacter sp. SXCC-1] Length = 623 Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust. Identities = 315/623 (50%), Positives = 408/623 (65%), Gaps = 8/623 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + R+YDVIV+GGGHAGCEAAA AA+ GA T L+TH+ TIG MSCNPAIGG+GKGHLVRE Sbjct: 1 MKRAYDVIVVGGGHAGCEAAAAAARAGARTLLLTHRFDTIGVMSCNPAIGGIGKGHLVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDALDGLMG AD AGI F++LN KGPAV GPR QADR LYRLA+Q + E LD+++ Sbjct: 61 IDALDGLMGIAADRAGIHFKLLNRSKGPAVHGPRAQADRTLYRLAIQDLLARTEGLDIVE 120 Query: 122 GEVAGF--NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 G N + + +V +D VVL TGTFLRG IHIG PAGR+GD P+ Sbjct: 121 GAAGDLLVNAQGGV-EGVVCEDGRSFASGAVVLATGTFLRGTIHIGHESEPAGRVGDRPA 179 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIE 239 N+L GRLKTGTPAR+ +I WD + D FS MTD ITN I Sbjct: 180 NALGRRLAALGLRMGRLKTGTPARIARDSIEWDSLAEDRGDAVPEAFSRMTDAITNPMIS 239 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT T TH II EN++ SA+Y G I GPRYCPSIEDK+VRF +R HQIFLEPEG Sbjct: 240 CRITATTPRTHEIIRENLQLSALYGGVISGRGPRYCPSIEDKVVRFAQRESHQIFLEPEG 299 Query: 300 LNTD----VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTL 355 L ++ +VYPNGIST+LPE +Q + +R+IPGLE ++RPGYA+EYDY++P+EL PTL Sbjct: 300 LPSNPDGALVYPNGISTSLPEHVQLEMLRSIPGLENCRMVRPGYAVEYDYVDPRELAPTL 359 Query: 356 ETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDL 415 E K + GLFLAGQ+NGTTGYEEA AQGL+AGIN+AR + + + +R +YIGVMIDDL Sbjct: 360 ELKNLPGLFLAGQVNGTTGYEEAGAQGLIAGINAARHAAGQEGVTLARGQAYIGVMIDDL 419 Query: 416 TSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLR 475 T++GV EPYRMFTSRAEYR++LR DNAD RLTP+G++ GC+G R R + Sbjct: 420 TTQGVSEPYRMFTSRAEYRLTLRADNADLRLTPLGLEWGCVGSARAARLLSDRTAIDAAM 479 Query: 476 SLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIER 535 + S T L ++ DG+ R+ + L+ D + + + P S V + Sbjct: 480 ARASSETCTPDALRREGVNVSADGRARSLMDVLAT-DATPDVIARVAPWFADLSPRVAQH 538 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 L E+ Y+ Y RQ E +++ E + ++P D DY + LS E++E+L+ ++P A Sbjct: 539 LMTEARYSGYIARQEREIRQLASESRIVLPADLDYHQIGGLSTEMQERLAQVRPVTFGAA 598 Query: 596 SKIEGMTPAALNLLLIYIKKNTV 618 +I G+TP+AL LL +++ V Sbjct: 599 QRIPGITPSALVALLAHVRHRPV 621 >gi|58617395|ref|YP_196594.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ehrlichia ruminantium str. Gardel] gi|81170538|sp|Q5FFY7|MNMG_EHRRG RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|58417007|emb|CAI28120.1| Glucose inhibited division protein A [Ehrlichia ruminantium str. Gardel] Length = 625 Score = 600 bits (1546), Expect = e-169, Method: Compositional matrix adjust. Identities = 301/617 (48%), Positives = 412/617 (66%), Gaps = 7/617 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDV+VIGGGH+GCEAAA AA++GA T LITH STIG MSCNPAIGG+ KG +VRE+D Sbjct: 2 KKYDVVVIGGGHSGCEAAAAAARIGAKTLLITHSISTIGEMSCNPAIGGIAKGIVVREVD 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDGLMG+V D A I +LN KGPAV GPR QADR+LYR AMQ IL+ NL V++ Sbjct: 62 ALDGLMGKVIDNASINSTILNRSKGPAVWGPRAQADRDLYRHAMQNSILNYPNLTVLEAS 121 Query: 124 VAGFNTEKN----IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 V F T N I+S++ D +I ++LTTGTFL+G IHIG PAGR + S Sbjct: 122 VENFTTTDNQELPTINSVITADQEVIYTKKLILTTGTFLQGTIHIGSYNTPAGRFNEQSS 181 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIE 239 L + ++F GRL+TGTP RLD +I + ++Q D PFS+M++ I QI Sbjct: 182 VGLAKTLASYNFKLGRLRTGTPPRLDRNSINFSGLQEQKGDTPPSPFSYMSESINLPQIS 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSY-GPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C +T TN +TH +I N+ H A S +K PRYCPSIE+K+ RF ERN HQ+FLEPE Sbjct: 242 CYLTATNTKTHEVIKNNL-HKAAASNLLKEIKAPRYCPSIEEKVRRFSERNSHQVFLEPE 300 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GLN++++YPNGI+T+ P ++Q ++TI GLE V I+R GY++EY++I+P+EL+ TLETK Sbjct: 301 GLNSEIIYPNGITTSSPLDVQQTMLKTILGLENVKIVRSGYSVEYNFIDPRELYHTLETK 360 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSN-KLDCICFSRTDSYIGVMIDDLTS 417 KI GL+ AGQINGTTGYEEAA QG++AGIN+A N + R D+YIGVMIDDL + Sbjct: 361 KIRGLYCAGQINGTTGYEEAAGQGIIAGINAALSLNSNYEPFILKRNDAYIGVMIDDLVT 420 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL 477 G EPYR+FTSRAEYR+ LR DNAD RLT +G K+ + +R + +E L ++ Sbjct: 421 LGTSEPYRLFTSRAEYRLRLRSDNADLRLTELGYKISAVSYQRYLTLNRKKEEVTKLTNI 480 Query: 478 LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 LK V+ LS + QDG+ R+A++ LS P+ ++ L IC + + + I++++ Sbjct: 481 LKETVILPSQLSQHGVCISQDGRKRSAFDLLSNPNINMNILSKICNQIKNYHANTIQQVE 540 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 IE+ YA Y +Q ++ + EE IP D ++S + LS E++EKL +KP ++ A + Sbjct: 541 IEAKYAPYFIKQELDIQSFIAEENTHIPHDIEFSQIHGLSTEIQEKLQYMKPPSIGSARR 600 Query: 598 IEGMTPAALNLLLIYIK 614 I G+TPAA+ +L Y++ Sbjct: 601 IPGVTPAAITNILFYLR 617 >gi|77920731|ref|YP_358546.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pelobacter carbinolicus DSM 2380] gi|123573042|sp|Q39ZT1|MNMG_PELCD RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|77546814|gb|ABA90376.1| glucose inhibited division protein GidA [Pelobacter carbinolicus DSM 2380] Length = 619 Score = 599 bits (1545), Expect = e-169, Method: Compositional matrix adjust. Identities = 306/615 (49%), Positives = 401/615 (65%), Gaps = 3/615 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + Y+VIV+G GHAGCEAA +A++G +T L+ + MSCNPAIGGL KGHLVREID Sbjct: 6 KDYEVIVVGAGHAGCEAALASARMGCNTLLLNLHLDAVAQMSCNPAIGGLAKGHLVREID 65 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M RV DA GIQFR LN KKGPAVR R QADR Y+ M++ + +Q LD+ QG Sbjct: 66 ALGGEMARVIDATGIQFRTLNTKKGPAVRATRAQADRRAYQFHMKQVVENQPALDLKQGS 125 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V+ + + +S + D TVVLTTGTF+RG+IH+G P GR G+ PS L Sbjct: 126 VSRLILQGDKVSGVETTDGLRFFGQTVVLTTGTFMRGLIHVGLQHFPGGRAGEPPSLGLS 185 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + + GRLKTGTPARLDG TI +D+ Q D PFS T+KIT+ Q+ C IT Sbjct: 186 DHLAELGLRVGRLKTGTPARLDGNTIDYDRLVPQHGDVPPKPFSADTEKITSPQVPCFIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + + S +Y G I+ GPRYCPSIEDKI+RF +++ H +FLEPEGL T Sbjct: 246 ATNAHTHDIIRQGLDRSPLYQGVIEGVGPRYCPSIEDKIMRFPDKDSHHVFLEPEGLGTR 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNG+ST+LP ++Q F+RTIPGLE V I+RPGYAIEYD+++P +L P+LETKKI L Sbjct: 306 EVYPNGVSTSLPPDVQLAFLRTIPGLEHVEIMRPGYAIEYDFVDPIQLKPSLETKKIRNL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 FLAGQINGT+GYEEAAAQGL+AGIN+ + R +YIGVMIDDL + G EP Sbjct: 366 FLAGQINGTSGYEEAAAQGLMAGINAVHALRDCPPVVLGRDQAYIGVMIDDLVTCGTSEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLTP+G ++G + + R +RF + + + R L+ L Sbjct: 426 YRMFTSRAEYRLLLREDNADQRLTPLGHQVGLVSDERWQRFTRKMDKIVEGRDFLEKRRL 485 Query: 484 TSKNLSSTSISFKQDGKTRTAY-EFLSYPDFSIQNLFSICPD-ARKFSSLVIERLQIESS 541 +S + + +D K + + L PD +I++L C D V E+LQIE Sbjct: 486 SSSDKEAIGRLGLEDLKNGLSLVQILRRPDINIEDLV-FCDDRLADIPENVREQLQIEIK 544 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y RQ + + E+ IP D DYS + LS E++EKL ++P NL QA++I G+ Sbjct: 545 YEGYIARQYEMVERFRRSEQIAIPSDMDYSPIEGLSIEVREKLQKVRPQNLGQAARIPGV 604 Query: 602 TPAALNLLLIYIKKN 616 TPAA+ +L + +++N Sbjct: 605 TPAAVAILSVLLRRN 619 >gi|149178844|ref|ZP_01857424.1| glucose-inhibited division protein A [Planctomyces maris DSM 8797] gi|148842319|gb|EDL56702.1| glucose-inhibited division protein A [Planctomyces maris DSM 8797] Length = 610 Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust. Identities = 293/618 (47%), Positives = 404/618 (65%), Gaps = 18/618 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 ++ YD++V+G GHAGCEAA +A+LGA TAL+T T+G MSCNPAIGG+ KG +VRE Sbjct: 5 VSYDYDIVVVGAGHAGCEAALASARLGAKTALLTMNCDTVGQMSCNPAIGGVAKGQIVRE 64 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G MGRV D GIQFR+LN+ KGPA+ PR QAD++ Y+ M+ ++ Q+NL + Q Sbjct: 65 IDALGGEMGRVIDETGIQFRMLNLSKGPAMHSPRAQADKKAYQFCMKWKVEQQDNLALRQ 124 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E + I + + ++ R V+LTTGTFL+ ++H G+ K GR G+ + + Sbjct: 125 EIVKSLIVENDQICGVEVHGDATYRARAVILTTGTFLQAIMHTGEAKTKGGRAGEGTTGT 184 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L +S + F+ R KTGTPARL+G+TI + E+Q DER PFS+MT+K+T Q+ C Sbjct: 185 LSDSLAQLGFELQRFKTGTPARLNGRTIDFSVLEEQPGDERPQPFSYMTEKLTQEQMPCY 244 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN HR+I EN+ + +YSG I S GPRYCPSIEDK+VRF ERN HQIFLEPEG Sbjct: 245 LTETNEHVHRVINENLHRAPMYSGQINSTGPRYCPSIEDKVVRFSERNSHQIFLEPEGRY 304 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ Y NGIST+LP ++Q + I +I GLEK I+R GYA+EYD+ P +L PTLETK+++ Sbjct: 305 TNEYYCNGISTSLPRDVQDEMIHSIRGLEKTEIMRYGYAVEYDFATPTQLKPTLETKRVA 364 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GL+ AGQ+NGTTGYEEAA QGL+AG+N+A K + + R ++Y+GV+IDDL +KGV Sbjct: 365 GLYFAGQLNGTTGYEEAAGQGLLAGLNAALKIAGKEDLILDRNEAYLGVLIDDLVTKGVD 424 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAE+R+ LR DNAD R+TPIG ++G + + R ++F Y E + + ++ Sbjct: 425 EPYRMFTSRAEFRLLLRQDNADRRMTPIGQRIGSVSQERWEQFQAYEAEISQIMEFIRGN 484 Query: 482 VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF--SSLVIERLQIE 539 + L E+L D +++ P+ + F S IE+ IE Sbjct: 485 RYQGQTLE----------------EWLRRQDTGWEDICGFAPELKAFPLSERAIEQTLIE 528 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 YA Y RQ E ++ K E IP DY +P L NE KEKLS +KP N+ QA +I Sbjct: 529 VQYAGYIKRQTAEIEKQKNVETLHIPDHIDYQLVPNLRNEAKEKLSRVKPRNIGQAGRIS 588 Query: 600 GMTPAALNLLLIYIKKNT 617 G+TPA L +L++Y+ ++ Sbjct: 589 GVTPADLTVLVLYLNSSS 606 >gi|57239374|ref|YP_180510.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ehrlichia ruminantium str. Welgevonden] gi|58579341|ref|YP_197553.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ehrlichia ruminantium str. Welgevonden] gi|81170539|sp|Q5HAN4|MNMG_EHRRW RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|57161453|emb|CAH58378.1| glucose inhibited division protein A [Ehrlichia ruminantium str. Welgevonden] gi|58417967|emb|CAI27171.1| Glucose inhibited division protein A [Ehrlichia ruminantium str. Welgevonden] Length = 625 Score = 596 bits (1537), Expect = e-168, Method: Compositional matrix adjust. Identities = 300/617 (48%), Positives = 411/617 (66%), Gaps = 7/617 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDV+VIGGGH+GCEAAA AA++GA T LITH STIG MSCNPAIGG+ KG +VRE+D Sbjct: 2 KKYDVVVIGGGHSGCEAAAAAARIGAKTLLITHSISTIGEMSCNPAIGGIAKGIVVREVD 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDGLMG+V D A I +LN KGPAV GPR QADR+LYR AMQ IL+ NL V++ Sbjct: 62 ALDGLMGKVIDNASINSTILNRSKGPAVWGPRAQADRDLYRHAMQNSILNYPNLTVLEAS 121 Query: 124 VAGFNTEKN----IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 V F T N I+S++ D +I ++LTTGTFL+G IHIG PAGR + S Sbjct: 122 VENFTTTDNQELPTINSVITADQEVIYTKKLILTTGTFLQGTIHIGSYNTPAGRFNEQSS 181 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIE 239 L + ++F GRL+TGTP RLD +I + ++Q D PFS+M++ I QI Sbjct: 182 VGLAKTLASYNFKLGRLRTGTPPRLDRNSINFSGLQEQKGDTPPSPFSYMSESINLPQIS 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSY-GPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C +T TN +TH +I N+ H A S +K PRYCPSIE+K+ RF ERN HQ+FLEPE Sbjct: 242 CYLTATNTKTHEVIKNNL-HKAAASNLLKEIKAPRYCPSIEEKVRRFSERNSHQVFLEPE 300 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GLN++++YPNGI+T+ P ++Q ++TI GLE V I+R GY++EY++I+P+EL+ TLETK Sbjct: 301 GLNSEIIYPNGITTSSPLDVQQTMLKTISGLENVKIVRSGYSVEYNFIDPRELYHTLETK 360 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSN-KLDCICFSRTDSYIGVMIDDLTS 417 KI GL+ AGQINGTTGYEEAA QG++AGIN+A N + R D+YIGVMIDDL + Sbjct: 361 KIRGLYCAGQINGTTGYEEAAGQGIIAGINAALSLNSNYEPFILKRNDAYIGVMIDDLVT 420 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL 477 G EPYR+FTSRAEYR+ LR DNAD RLT +G K+ + +R + +E L ++ Sbjct: 421 LGTSEPYRLFTSRAEYRLRLRSDNADLRLTELGYKVSAVSYQRYLTLNRKKEEVTKLTNI 480 Query: 478 LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 LK V+ LS + QDG+ R+A++ LS P+ ++ L I + + + I++++ Sbjct: 481 LKETVILPSQLSQHGVCISQDGRKRSAFDLLSNPNINMNILSKIFNQIKNYHASTIQQVE 540 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 IE+ YA Y +Q ++ + EE IP D ++S + LS E++EKL +KP ++ A + Sbjct: 541 IEAKYAPYFIKQELDIQSFIAEENTHIPHDIEFSQIHGLSTEIQEKLQYMKPPSIGSARR 600 Query: 598 IEGMTPAALNLLLIYIK 614 I G+TPAA+ +L Y++ Sbjct: 601 IPGVTPAAITNILFYLR 617 >gi|294085213|ref|YP_003551973.1| glucose-inhibited division protein A [Candidatus Puniceispirillum marinum IMCC1322] gi|292664788|gb|ADE39889.1| glucose-inhibited division protein A [Candidatus Puniceispirillum marinum IMCC1322] Length = 648 Score = 594 bits (1532), Expect = e-167, Method: Compositional matrix adjust. Identities = 312/625 (49%), Positives = 421/625 (67%), Gaps = 14/625 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+GGGHAGCEAAA A+++GA+ AL+T + IG MSCNPAIGGLGKGHLVREIDA Sbjct: 4 AFDVIVVGGGHAGCEAAAAASRMGAAVALVTMRADRIGEMSCNPAIGGLGKGHLVREIDA 63 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGR D AGIQFR+LN +GPAV GPR QADR LYR A+Q + +++ +I+ V Sbjct: 64 LDGLMGRAIDRAGIQFRMLNKSRGPAVHGPRAQADRALYRAAIQEFLNEDDHITIIEAAV 123 Query: 125 ---------AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMG 175 AG ++ I+ +D ++ ++VVLTTGTFL G+IH+G + AGR+G Sbjct: 124 GDLLVDDMAAGLTGAPRQVTGIICEDGRELKAASVVLTTGTFLGGLIHLGNERTEAGRIG 183 Query: 176 DSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN 235 ++PSN L GRLKTGTP RLDG+TI W E Q AD IPFS MTDKIT Sbjct: 184 EAPSNMLATRLADLALPLGRLKTGTPPRLDGRTIDWSVLEMQPADNPPIPFSTMTDKITV 243 Query: 236 RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFL 295 QIECGITRT +THRII E+I SA+++G+I GPRYCPSIEDK+ RF +++ HQ+FL Sbjct: 244 PQIECGITRTTAKTHRIIAESIHLSAVFNGNISGQGPRYCPSIEDKVNRFADKDSHQLFL 303 Query: 296 EPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTL 355 EPEGL+ +YPNGIST+LP ++Q ++TIPGLE+ I++ GYAIEY++++P+ L TL Sbjct: 304 EPEGLDDHTIYPNGISTSLPRDVQEALVKTIPGLEQTVILQHGYAIEYNFVDPRALRQTL 363 Query: 356 ETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLD-----CICFSRTDSYIGV 410 E + + GL+LAGQINGTTGYEEAAAQGL+AG+N+A + D R D+YIGV Sbjct: 364 ELRVLPGLYLAGQINGTTGYEEAAAQGLMAGVNAALAAASGDNRQKTSFTLDRADAYIGV 423 Query: 411 MIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQE 470 MIDDL SKG EPYRMFTSRAEYR+ LR DNAD RLT GM +GC+G RQ + + ++ Sbjct: 424 MIDDLISKGAPEPYRMFTSRAEYRLLLRADNADQRLTEKGMAIGCVGSARQNVWHRKHKQ 483 Query: 471 YNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS 530 ++ L SL + K+L + +DG RTA + LS +I L + P+ +S Sbjct: 484 LAKAKATLLSLTASGKDLEIAGLPKPRDGGKRTAADMLSLEGITIDRLTPLWPELANIAS 543 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 L +L+ + YA Y RQ + ++ +E IP D D+S + LS E ++ L +P Sbjct: 544 LYHAQLEADYRYAGYVARQKADIDALRRDEATAIPDDLDFSVIGGLSAEAQDVLKRRQPE 603 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 + QA+++ G+TPA++ +L ++++ Sbjct: 604 TIGQANRLAGLTPASVVAVLRHLRR 628 >gi|148284568|ref|YP_001248658.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Orientia tsutsugamushi str. Boryong] gi|166222713|sp|A5CDS8|MNMG_ORITB RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|146740007|emb|CAM80083.1| glucose-inhibited division protein A [Orientia tsutsugamushi str. Boryong] Length = 622 Score = 592 bits (1526), Expect = e-167, Method: Compositional matrix adjust. Identities = 296/589 (50%), Positives = 395/589 (67%), Gaps = 2/589 (0%) Query: 26 KLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNV 85 ++G ALIT K +G M CNPAIGG GKGH+V+E+DALDGL+G +AD AGI +++LN Sbjct: 24 RIGVKVALITLKPENLGEMPCNPAIGGRGKGHIVKEVDALDGLIGYIADQAGIHYKMLNH 83 Query: 86 KKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMI 145 KGPAV GPR Q DR LY+ AM I++ NL I V N ++++++ + I Sbjct: 84 TKGPAVWGPRAQIDRALYKSAMYSTIMNYPNLTTIFASVEDIKVIANKVTAVIV-NGKEI 142 Query: 146 RCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLD 205 C V+LTTGTFL GVIH GK +I AGR+G++ S L N+ + GRLKTGTP R+D Sbjct: 143 YCQKVILTTGTFLSGVIHRGKEQIKAGRLGENASYGLSNTLSELGLRLGRLKTGTPPRID 202 Query: 206 GKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSG 265 +TI + K E+Q D PFS +T K+ QI+C ITRTN TH+II EN+ SA+YSG Sbjct: 203 SRTIDYSKLEEQPGDLIPTPFSEITKKVLVPQIKCYITRTNEITHKIIKENLHLSAMYSG 262 Query: 266 DIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRT 325 I+ GPRYCPSIEDKI+RF HQIFLEPEGLN++ +YPNGIST+LP ++Q IRT Sbjct: 263 QIQGTGPRYCPSIEDKIIRFSHNASHQIFLEPEGLNSNTIYPNGISTSLPSDVQENMIRT 322 Query: 326 IPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVA 385 I GLE II GYAIEYDY++P++L +LE K + GL+LAGQINGTTGYEEAA QG++A Sbjct: 323 IEGLENCKIIAYGYAIEYDYVDPRQLKHSLEVKSVGGLYLAGQINGTTGYEEAAGQGIMA 382 Query: 386 GINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNR 445 GIN+A K D RTD+YIGVMIDDLT+ G+ EPYRMFTSR+EYR+S+R DNAD R Sbjct: 383 GINAALAVKKQDPFILDRTDAYIGVMIDDLTN-GIDEPYRMFTSRSEYRLSIRADNADQR 441 Query: 446 LTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAY 505 LTP + LGC+ + RQ+ F K + + N LR ++SL +T K L + Q+G RTA+ Sbjct: 442 LTPKAIDLGCVSQLRQEVFQKKLSKLNTLRDYVQSLTITPKQLQNCGYQISQNGIARTAF 501 Query: 506 EFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIP 565 L P+F I + I P+ ++ + ++ L ES Y Y RQ + + K EE IP Sbjct: 502 SLLGLPNFGINIVKDIYPELNRYDNNLLLLLTYESKYHVYLERQKEDIELFKQEETYQIP 561 Query: 566 KDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIK 614 +D +Y +P+LS E++EKL +P + A I G+TP+A+ ++I++K Sbjct: 562 QDLNYDQIPSLSIEVREKLKQYQPETIRAAKHINGVTPSAIMAIIIFLK 610 >gi|270158240|ref|ZP_06186897.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Legionella longbeachae D-4968] gi|289163504|ref|YP_003453642.1| glucose-inhibited division protein A GidA [Legionella longbeachae NSW150] gi|269990265|gb|EEZ96519.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Legionella longbeachae D-4968] gi|288856677|emb|CBJ10488.1| putative glucose-inhibited division protein A GidA [Legionella longbeachae NSW150] Length = 624 Score = 592 bits (1525), Expect = e-167, Method: Compositional matrix adjust. Identities = 304/621 (48%), Positives = 411/621 (66%), Gaps = 5/621 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + + YDVI++GGGHAG EAA AA++G T L+TH +G MSCNPAIGG+GKGHLV+E Sbjct: 3 LEKLYDVIIVGGGHAGTEAALAAARMGMQTLLLTHNMDLLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDALDG M + AD AGIQFR+LN KGPAVR R QADR LYR A++ ++ +QENL + Q Sbjct: 63 IDALDGAMAKAADKAGIQFRILNASKGPAVRATRAQADRVLYRQAIREQLQTQENLTLFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E ++ ++ Q +R VVLT GTFL G IH+G + GR GD PS + Sbjct: 123 QAVDDLLIEGERVAGVITQMGFTLRARAVVLTVGTFLGGKIHVGMNQYAGGRAGDPPSVA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIEC 240 L S D GRLKTGTP R+D +++ +++ Q D + FS++ + +QI C Sbjct: 183 LAKSLRDLDLPVGRLKTGTPPRIDRRSLDYNQMIVQPGDTPIPVFSYLGHVSDHPQQIPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT T TH II N+ S +Y+G I+ GPRYCPSIEDKIVRF +++ HQIF+EPEGL Sbjct: 243 HITHTTEATHEIIRNNLHKSPMYAGVIEGVGPRYCPSIEDKIVRFADKSSHQIFVEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T+ +YPNGIST+LP E+Q QF+RTI G E +I RPGYAIEYDY +P+ L L+TK I Sbjct: 303 TTEEIYPNGISTSLPFEVQVQFVRTIKGFENAHITRPGYAIEYDYFDPRGLTSFLQTKPI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 LF AGQINGTTGYEEAAAQG++AG+N+A + + C R ++YIGV+IDDL ++G Sbjct: 363 PNLFFAGQINGTTGYEEAAAQGIIAGMNAALYVQEKELWCPRRDEAYIGVLIDDLITRGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT G +LG +GE R + FA + +SLL S Sbjct: 423 QEPYRMFTSRAEYRLLLREDNADLRLTAKGRELGIVGETRWQHFATKREAIESTQSLLHS 482 Query: 481 -LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDAR--KFSSLVIERLQ 537 V S N + + A EFL P+ + +L + PD + +S V E+++ Sbjct: 483 TWVRVSHNQILSDVLVNPMQHDTRAVEFLKRPEINYHHLL-MLPDLNLPELASEVSEQIE 541 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I++ YA Y RQ + ++++ +E ++P+ DYS + LSNE+ +KL+ ++P L QAS+ Sbjct: 542 IQNKYAGYIDRQQQDIEKMRKQENMVLPEWLDYSEVTGLSNEVIQKLTKIRPTTLAQASR 601 Query: 598 IEGMTPAALNLLLIYIKKNTV 618 I G+TPAAL+LLL+++KK + Sbjct: 602 ISGVTPAALSLLLVHLKKQRI 622 >gi|310817162|ref|YP_003965126.1| glucose-inhibited division protein A [Ketogulonicigenium vulgare Y25] gi|308755897|gb|ADO43826.1| glucose-inhibited division protein A [Ketogulonicigenium vulgare Y25] Length = 623 Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust. Identities = 299/588 (50%), Positives = 400/588 (68%) Query: 28 GASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKK 87 GA TAL+T + IG MSCNPAIGGLGKGHLVRE+DA+DG+MGRVAD AGIQFR+LN+KK Sbjct: 28 GARTALVTLSQAGIGVMSCNPAIGGLGKGHLVREVDAMDGVMGRVADYAGIQFRMLNLKK 87 Query: 88 GPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRC 147 GPAV+GPR QADR YR MQREI++ NL V+QGEV + +++ + + D + I Sbjct: 88 GPAVQGPRAQADRARYRTQMQREIMATPNLTVVQGEVVDLVVKDGVVTGVELADGAQIAT 147 Query: 148 STVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGK 207 VVLTTGTFLRGVIHIG GRMG+ PS L GRLKTGTP RLDG+ Sbjct: 148 RAVVLTTGTFLRGVIHIGDKSHAGGRMGEQPSVRLAERMRALALPLGRLKTGTPPRLDGR 207 Query: 208 TIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDI 267 TI W E Q D+ + FSF+ RQI CGIT TN TH II EN+ SA+Y G I Sbjct: 208 TIDWSVLESQPGDDVPVMFSFLNKVPPARQISCGITHTNARTHDIIRENLSRSAMYGGHI 267 Query: 268 KSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIP 327 + GPRYCPSIEDKIVRF ++ HQIFLEPEGL+ VYPNGIST+LP+++Q ++ +I Sbjct: 268 EGIGPRYCPSIEDKIVRFADKESHQIFLEPEGLDDHTVYPNGISTSLPQDVQADYVHSIK 327 Query: 328 GLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGI 387 GLE I +PGYAIEYDY++P+ L +LE K + GL+LAGQINGTTGYEEAAAQGL AG+ Sbjct: 328 GLENAVITQPGYAIEYDYVDPRALSASLEVKALPGLYLAGQINGTTGYEEAAAQGLAAGL 387 Query: 388 NSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLT 447 N+A K+ + + FSR +SYIGVMIDDL ++GV EPYRMFTSRAE+R+SLR DNAD RLT Sbjct: 388 NAAAKALSQEAMIFSRANSYIGVMIDDLITRGVTEPYRMFTSRAEFRLSLRADNADQRLT 447 Query: 448 PIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEF 507 G + G + + R + +A N +R+ L+ + T++ L++ ++ D ++R Sbjct: 448 EWGRENGAVKDARWQAYAAKRDGLNDVRARLEGVKFTARALAAAGVNINADKESRDGLGV 507 Query: 508 LSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKD 567 L+ D S + S+ P+ + +++ ++ Y++Y RQ + ++ +E IP + Sbjct: 508 LALSDTSFDTIISLAPEMSDVPGDIQAQIKRDALYSSYMDRQNRDIAALQRDENLTIPAE 567 Query: 568 FDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 +++LP LS+EL KL ++P N+ Q +KIEGMTP+A+ L+ I +++ Sbjct: 568 MSFTALPGLSSELALKLGRIRPGNMAQVAKIEGMTPSAMLLISIAVRR 615 >gi|114326675|ref|YP_743832.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Granulibacter bethesdensis CGDNIH1] gi|122328340|sp|Q0BW93|MNMG_GRABC RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|114314849|gb|ABI60909.1| putative tRNA (5-carboxymethylaminomethyl-2-thiouridylate) synthase subunit GidA [Granulibacter bethesdensis CGDNIH1] Length = 629 Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust. Identities = 307/614 (50%), Positives = 412/614 (67%), Gaps = 3/614 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+GGGHAGCEAAA AA+ GA TAL+TH+ +TIG MSCNPAIGG+GKGHLVREIDA Sbjct: 11 AYDVIVVGGGHAGCEAAAAAARTGAITALVTHQAATIGEMSCNPAIGGIGKGHLVREIDA 70 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGR D A I F++LN KGPAVRGPR QADR+LY+ A+Q + + +L +I+G V Sbjct: 71 LDGLMGRAIDQACIHFKMLNRSKGPAVRGPRAQADRKLYKKAVQDILHTTPHLSIIEGSV 130 Query: 125 AGFNTE---KNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 T + + +++QD + S VVLTTGTFLRGVIH G+ + AGR+G++PS Sbjct: 131 EDLITSSGTQQTVQGVILQDGRHLSASAVVLTTGTFLRGVIHCGEQRSEAGRVGEAPSIG 190 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L + GRLKTGTP R+D ++I W+ + + PFS + I QI C Sbjct: 191 LAKRLDALNLRMGRLKTGTPPRIDRRSIAWEDLPEDRGENPPTPFSTLNHHIDLPQISCR 250 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 I+ T +TH+II +N+ SA+Y G + GPRYCPSIEDK+VRF ++ HQ+FLEPEGL+ Sbjct: 251 ISETTADTHQIIRDNLHRSAVYGGMLSGKGPRYCPSIEDKVVRFPDKTRHQVFLEPEGLD 310 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 VYPNGIST+LP E+Q + ++PGL IIRPGYA+EYD+++P+ L P+LE K++ Sbjct: 311 DFTVYPNGISTSLPAEVQEALLHSMPGLHNAVIIRPGYAVEYDFVDPRSLRPSLELKELP 370 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLFLAGQINGTTGYEEA AQGL+AG+N+ARK+ LD + R+ +YIGV+IDDLT+ GV Sbjct: 371 GLFLAGQINGTTGYEEAGAQGLMAGLNAARKAQGLDSVTLDRSQAYIGVLIDDLTTHGVT 430 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSR+E+R++LR DNAD RLT G + GC+ + R K FA Y Q N +L Sbjct: 431 EPYRMFTSRSEFRLTLRADNADRRLTRWGRQAGCVSDERWKTFAAYDQAMNDALTLAAQD 490 Query: 482 VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 T L I+ +QDG+ R + Q L P V E+L+IE + Sbjct: 491 TRTPVQLQQVGITVRQDGRRRPLLSLIGSDPEQDQKLNQAFPWLHDLDPRVREQLEIEGA 550 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y+ Y RQ E + ++ E+ L+ DYS++ LS E+++KL L+P +L AS++EGM Sbjct: 551 YSGYLSRQDKERRVLQQEDTILLSDHIDYSAIGGLSAEIRDKLQSLRPTSLGAASRMEGM 610 Query: 602 TPAALNLLLIYIKK 615 TPAAL + ++++ Sbjct: 611 TPAALAAISHFVRR 624 >gi|73667267|ref|YP_303283.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ehrlichia canis str. Jake] gi|123614801|sp|Q3YRH0|MNMG_EHRCJ RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|72394408|gb|AAZ68685.1| Glucose-inhibited division protein A subfamily [Ehrlichia canis str. Jake] Length = 625 Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust. Identities = 303/616 (49%), Positives = 427/616 (69%), Gaps = 9/616 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+VIGGGHAGCEAAA A+++GA T LITH STIG MSCNPAIGG+ KG +VRE+DAL Sbjct: 4 YDVVVIGGGHAGCEAAAAASRIGAKTLLITHSISTIGEMSCNPAIGGIAKGTVVREVDAL 63 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGLMG+V D A I +LN KGPAV GPR QADR +Y+ MQ IL+ NL V++ V Sbjct: 64 DGLMGKVIDKASIHSSILNRSKGPAVWGPRAQADRLIYKQTMQEIILNYPNLTVLEASVE 123 Query: 126 GF----NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 F + +K+ + +++ + I S ++LTTGTFL+G IHIG PAGR+G+ PS Sbjct: 124 DFTITQDNQKDSVKAVITSEQHTIYTSKLILTTGTFLQGTIHIGSYTTPAGRIGEQPSIG 183 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L + K++F GRL+TGTP RLD +I + ++Q D PFS+++ I QI C Sbjct: 184 LAKTLEKYNFKLGRLRTGTPPRLDINSINFAVLQEQKGDIHPSPFSYISQSIDLPQISCY 243 Query: 242 ITRTNLETHRIIMENIKHSAIYS--GDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 +T TN +TH +I N+ +A + DIK+ PRYCPSIE+K+ RF +RN HQ+FLEPEG Sbjct: 244 LTATNNKTHEVIKNNLHRAAASNLLKDIKA--PRYCPSIEEKVRRFSDRNSHQVFLEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 LN+D++YPNGI+T+ P ++Q++ ++TIPGLEKVNI+R GY++EY++I+P+EL+ TLETKK Sbjct: 302 LNSDIIYPNGITTSSPLDVQYEMLKTIPGLEKVNIVRSGYSVEYNFIDPRELYHTLETKK 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARK-SNKLDCICFSRTDSYIGVMIDDLTSK 418 ISGL+ AGQINGTTGYEEAA QG++AGIN+A S+ + R+D+YIGVMIDDL + Sbjct: 362 ISGLYFAGQINGTTGYEEAAGQGIIAGINAALSLSSNYEPFILKRSDAYIGVMIDDLVTL 421 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYR+FTSRAEYR+ LR DNAD RLT +G K+ + +R + L ++L Sbjct: 422 GTSEPYRLFTSRAEYRLRLRSDNADLRLTELGYKVSAVSSKRYCALKNKQHDIESLTNIL 481 Query: 479 KSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 K++++T L++ I QDG R+ ++ LS+P+ +I+ + IC +KFS V+ +++I Sbjct: 482 KNIIITPTQLAAYDIPVSQDGVKRSIFDLLSHPNINIETVSKICDVIKKFSKAVVSQVEI 541 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E YA Y RQ + ++ EE IP + ++S + LS E++EKL+ +KP ++ A +I Sbjct: 542 EGKYAPYFIRQDADIQDFIEEENTHIPSNIEFSQIHGLSKEIQEKLAHIKPPSIGSARRI 601 Query: 599 EGMTPAALNLLLIYIK 614 G+TPAA+ +LIY++ Sbjct: 602 PGVTPAAITSILIYLR 617 >gi|189183418|ref|YP_001937203.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Orientia tsutsugamushi str. Ikeda] gi|238692238|sp|B3CR62|MNMG_ORITI RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|189180189|dbj|BAG39969.1| glucose inhibited division protein A [Orientia tsutsugamushi str. Ikeda] Length = 622 Score = 590 bits (1521), Expect = e-166, Method: Compositional matrix adjust. Identities = 296/589 (50%), Positives = 395/589 (67%), Gaps = 2/589 (0%) Query: 26 KLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNV 85 ++G ALIT K +G M CNPAIGG GKGH+V+E+DALDGL+G +AD AGI +++LN Sbjct: 24 RIGVKVALITLKPENLGEMPCNPAIGGRGKGHIVKEVDALDGLIGYIADQAGIHYKMLNH 83 Query: 86 KKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMI 145 KGPAV GPR Q DR LY+ AM I++ NL I V N ++++++ + I Sbjct: 84 TKGPAVWGPRAQIDRALYKSAMYSTIMNYPNLTTIFASVEDIKVIANKVTAVIV-NGKEI 142 Query: 146 RCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLD 205 C V+LTTGTFL GVIH GK +I AGR+G++ S L N+ + GRLKTGTP R+D Sbjct: 143 YCQKVILTTGTFLSGVIHRGKEQIKAGRLGENASYGLSNTLSELGLRLGRLKTGTPPRID 202 Query: 206 GKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSG 265 +TI + K E+Q D PFS +T K+ QI+C ITRTN TH+II EN+ SA+YSG Sbjct: 203 SRTIDYSKLEEQPGDLIPTPFSEITKKVLVPQIKCYITRTNEITHKIIKENLHLSAMYSG 262 Query: 266 DIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRT 325 I+ GPRYCPSIEDKI+RF HQIFLEPEGLN++ +YPNGIST+LP ++Q IRT Sbjct: 263 QIQGTGPRYCPSIEDKIIRFSHNASHQIFLEPEGLNSNTIYPNGISTSLPSDVQENMIRT 322 Query: 326 IPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVA 385 I GLE II GYAIEYDY++P++L +LE K + GL+LAGQINGTTGYEEAA QG++A Sbjct: 323 IEGLENCKIIAYGYAIEYDYVDPRQLKRSLEVKSVDGLYLAGQINGTTGYEEAAGQGIMA 382 Query: 386 GINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNR 445 GIN+A K D RTD+YIGVMIDDLT+ G+ EPYRMFTSR+EYR+S+R DNAD R Sbjct: 383 GINAALAVKKQDPFILDRTDAYIGVMIDDLTN-GIDEPYRMFTSRSEYRLSIRADNADQR 441 Query: 446 LTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAY 505 LTP + LGC+ + R++ F K + + N LR ++SL +T K L + Q+G RTA+ Sbjct: 442 LTPKAIDLGCVSQLRKEVFQKKLSKLNTLRDYVQSLTITPKQLQNCGYQISQNGIARTAF 501 Query: 506 EFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIP 565 L P+F I + I P+ ++ + ++ L ES Y AY RQ + K EE IP Sbjct: 502 SLLGLPNFGINIVKDIYPELNRYDNNLLLLLTYESKYHAYLERQKEDIVLFKQEETYQIP 561 Query: 566 KDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIK 614 +D +Y +P+LS E++EKL +P + A I G+TP+A+ ++I++K Sbjct: 562 QDLNYDQIPSLSIEVREKLKQSQPETIRAAKHINGVTPSAIMAIIIFLK 610 >gi|95929980|ref|ZP_01312720.1| glucose inhibited division protein A [Desulfuromonas acetoxidans DSM 684] gi|95133949|gb|EAT15608.1| glucose inhibited division protein A [Desulfuromonas acetoxidans DSM 684] Length = 622 Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust. Identities = 295/613 (48%), Positives = 409/613 (66%), Gaps = 1/613 (0%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 ++ Y+V+V+G GHAGCEAA AA++G T L+ + MSCNPAIGGL KGHLVREI Sbjct: 5 DKKYEVVVVGAGHAGCEAALAAARMGHETLLLNMNLDAVAQMSCNPAIGGLAKGHLVREI 64 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G M + D GIQFRVLN KKGPAV+ R QADR LY +M+ + +QE LD+ QG Sbjct: 65 DALGGQMAKNIDKTGIQFRVLNTKKGPAVQASRAQADRFLYSQSMKLVVENQEKLDLKQG 124 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 V+ E+N I ++ +++ C VVLTTGTF+RG+IH+G P GR G+ PS L Sbjct: 125 TVSHLVVEENRIVAVEIKEGWRFNCQCVVLTTGTFMRGLIHVGMNHYPGGRSGEPPSLGL 184 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGI 242 + K FD GRLKTGTP RL +I + KTE+Q D+ PFS++++++ +Q+ C I Sbjct: 185 SDQLKKLGFDVGRLKTGTPPRLYRGSIDFSKTEEQPGDDTFRPFSYVSEQVNQQQVSCYI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II + S +YSG I+ GPRYCPSIEDK+VRF E+ HQ+FLEPEGLN+ Sbjct: 245 TATNEQTHEIIRSGLDRSPLYSGVIEGVGPRYCPSIEDKVVRFPEKTTHQVFLEPEGLNS 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNG+ T+LP ++Q +F+RTIPGLE V I+R GYAIEYDY++P +L P+LETK I G Sbjct: 305 SEIYPNGLPTSLPADVQLKFLRTIPGLENVEIMRVGYAIEYDYVDPIQLKPSLETKLIDG 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQ+NGT+GYEEAAAQGL+AGIN+ RK + R +YIGV+IDDL + G E Sbjct: 365 LFHAGQVNGTSGYEEAAAQGLMAGINAVRKIEGKPPVILRRDQAYIGVLIDDLINLGSKE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT +G ++G + E+R K ++ + + LL Sbjct: 425 PYRMFTSRAEYRLLLREDNADERLTELGYQVGLVDEQRWKHYSTKKKHIDEALKLLVDER 484 Query: 483 LTSKNLSS-TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +T+K+ +++ ++ ++A + L P+ +I L + +S V+ +++I Sbjct: 485 ITAKDKDKIAALNVEKISNGQSAKDLLKRPNITIAQLKGVVDGLDAYSDEVLLQVEIAVK 544 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y RQ + ++ K E IP+ FDY+ + +LS E+ EKL ++P NL QAS+I G+ Sbjct: 545 YDGYIKRQNDQVEKFKKNELVKIPETFDYTKVQSLSAEVIEKLCKIRPENLGQASRIPGV 604 Query: 602 TPAALNLLLIYIK 614 TPAA+ +L + ++ Sbjct: 605 TPAAITILSVLLR 617 >gi|307823023|ref|ZP_07653253.1| glucose inhibited division protein A [Methylobacter tundripaludum SV96] gi|307735798|gb|EFO06645.1| glucose inhibited division protein A [Methylobacter tundripaludum SV96] Length = 623 Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust. Identities = 304/620 (49%), Positives = 402/620 (64%), Gaps = 6/620 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R +DVIV+GGGHAG EAA +A+ GA+T L+T T+G MSCNPAIGG+GKGHLV+E+D Sbjct: 5 RDFDVIVVGGGHAGTEAALASARCGANTLLLTQNIDTLGQMSCNPAIGGIGKGHLVKEVD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G+M + D GIQFR LN KGPAVR R QADR+LY+ A++ + +Q NL + Q Sbjct: 65 ALGGVMAQAIDRGGIQFRTLNASKGPAVRATRAQADRQLYKQAVRTALENQPNLALFQQT 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V+ E + ++ + Q VVLTTGTFL G IHIG GR GD S +L Sbjct: 125 VSDLIVEGDRVAGVKTQMGLNFTARAVVLTTGTFLGGKIHIGLENYSGGRAGDPASIALA 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGI 242 + F RLKTGTP R+DG+TI + K E+Q DE + FSF+ + RQI C I Sbjct: 185 ERLRELPFRIDRLKTGTPPRIDGRTIDFSKLEEQHGDEPVPVFSFIGKPEHHPRQIPCHI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 TRTN +TH II + S +YSG I+ GPRYCPSIEDK+VRF +R+ HQIF+EPEGLNT Sbjct: 245 TRTNNKTHDIIRSGLDRSPLYSGIIEGIGPRYCPSIEDKVVRFADRDSHQIFVEPEGLNT 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNGIST+LP ++Q++F+R++ G E I+RPGYAIEYD+ +P++L +LETK ++ Sbjct: 305 HEIYPNGISTSLPFDVQYEFVRSMLGFENAEIVRPGYAIEYDFFDPRDLKSSLETKHMNA 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQ+NGTTGYEEAAAQGL+AG+N+AR LD C R ++YIGVMIDDL ++G E Sbjct: 365 LFFAGQVNGTTGYEEAAAQGLIAGLNAARLVQGLDSWCPGRDEAYIGVMIDDLITRGTQE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFA-KYIQEYNFLRSLLKSL 481 PYRMFTSRAEYR+ LR DNAD RLT G +LG + + R + F K L K Sbjct: 425 PYRMFTSRAEYRLLLREDNADLRLTEKGRELGLVDDARWQAFEIKRASIAQLQDDLKKKW 484 Query: 482 VLTSKNLSSTSISFKQDGKTRTA--YEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 V T + + R A + L P+ ++ L S A V E+++I+ Sbjct: 485 VRTETAEAGQVEQYWGKPLLREANLMDLLRRPEVDVKQLLSFMDSAEDMDPQVAEQVEIQ 544 Query: 540 SSYAAYTGRQMIE-AKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + YA Y RQ E K ++++ RL P+ DY+ +P LSNE+ EKL +P L QAS+I Sbjct: 545 AKYAGYIDRQQTEIDKALRYDHLRL-PEVIDYNGIPGLSNEVSEKLKKQRPETLGQASRI 603 Query: 599 EGMTPAALNLLLIYIKKNTV 618 G+TPAA++LLL+Y+KK + Sbjct: 604 PGITPAAISLLLVYLKKKSA 623 >gi|325109911|ref|YP_004270979.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Planctomyces brasiliensis DSM 5305] gi|324970179|gb|ADY60957.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Planctomyces brasiliensis DSM 5305] Length = 613 Score = 586 bits (1510), Expect = e-165, Method: Compositional matrix adjust. Identities = 295/613 (48%), Positives = 395/613 (64%), Gaps = 20/613 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAG EAA +A+LGA TAL+T T+G MSCNPAIGG+ KG +VREIDAL Sbjct: 8 YDVIVIGAGHAGTEAALASARLGAKTALLTMNCDTVGQMSCNPAIGGVAKGQIVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG V D GIQFR+LN KGPA+ PR QAD++ Y+ +M+ + +QENL + Q Sbjct: 68 GGEMGLVIDETGIQFRMLNRSKGPAMHSPRAQADKKAYQFSMKERVEAQENLSLRQEMAE 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 +E I+ + ++ N++ VVLTTGTFL+ V+H G+ K GR G+ + +L +S Sbjct: 128 SLLSENGKITGVRVRGNAVYCAKAVVLTTGTFLQAVMHTGEAKTAGGRAGEGTTGTLSDS 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 +F F+ R KTGTPAR++G+TI + + E Q D+ PFSF+TDKI+ Q++C IT T Sbjct: 188 LREFGFELARFKTGTPARINGRTIDFTQVEPQPGDDEPQPFSFLTDKISQPQMDCYITDT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N H +I N+ + +YSG I S GPRYCPSIEDK+VRF +N HQIFLEPEG NT Sbjct: 248 NESVHDVIRANLHRAPMYSGQINSQGPRYCPSIEDKVVRFASKNSHQIFLEPEGRNTYEY 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NGIST+LP ++Q Q IR+I GLE ++R GYA+EYD+ P +L PTLETK++ GLF Sbjct: 308 YCNGISTSLPRDVQDQMIRSIRGLENAEVMRYGYAVEYDFAPPTQLTPTLETKRVEGLFF 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAA QGL+AGIN+ARK+ R +Y+GV+IDDL +KGV EPYR Sbjct: 368 AGQINGTTGYEEAAGQGLIAGINAARKTAGQGEFVLERNQAYLGVLIDDLVTKGVDEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAEYR+ LR DNAD RLTP+ +LG R K F ++ + + +++ Sbjct: 428 MFTSRAEYRLLLRQDNADRRLTPLARELGLASRERLKSFEALSEQIDRAQQYVQTKRYQR 487 Query: 486 KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDAR--KFSSLVIERLQIESSYA 543 L E+L P+ + + L + P+ + S +++I+ Y+ Sbjct: 488 NTLE----------------EWLRRPEMTWEKLLEMVPELAELELSPRAARQVEIDGQYS 531 Query: 544 AYTGRQMIE-AKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMT 602 Y RQ E A+ K R IP FDYS+LP L NE K+KLS ++P L QA +I G+T Sbjct: 532 GYLKRQDKEIARHAKIHSIR-IPAGFDYSALPQLRNEAKDKLSRVQPVTLGQAERISGIT 590 Query: 603 PAALNLLLIYIKK 615 PA L +L++Y+ + Sbjct: 591 PADLTVLMMYLDR 603 >gi|322421974|ref|YP_004201197.1| glucose inhibited division protein A [Geobacter sp. M18] gi|320128361|gb|ADW15921.1| glucose inhibited division protein A [Geobacter sp. M18] Length = 624 Score = 586 bits (1510), Expect = e-165, Method: Compositional matrix adjust. Identities = 307/618 (49%), Positives = 401/618 (64%), Gaps = 9/618 (1%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 ++ YDVIV+G GHAGCEAA AA++G ST ++T I MSCNPAIGGL KGHLV+EI Sbjct: 5 DKKYDVIVVGAGHAGCEAALAAARIGCSTLMLTINLDAIALMSCNPAIGGLAKGHLVKEI 64 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G MGR DA GIQFRVLN KKGPAVR R QAD+++YRL M+ + Q++LD+ Q Sbjct: 65 DALGGEMGRNIDATGIQFRVLNTKKGPAVRASRAQADKQMYRLRMKHVMEQQDDLDLKQV 124 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 EV G E + + + TVVLTTGTF+RG+IHIG + P GR GD PS L Sbjct: 125 EVTGLYIEDGAVVGVDTKGGVRFLGKTVVLTTGTFMRGLIHIGLVNYPGGRAGDLPSIGL 184 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGI 242 + + FD GRLKTGTPARLDG+TI + + EKQ+ DE IPFSF TD+I Q+ C I Sbjct: 185 SDGLKDYGFDVGRLKTGTPARLDGRTIDFGRLEKQYGDEDPIPFSFSTDRIEQTQVPCHI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 TN +H II + S +Y+G I+ GPRYCPSIEDK+VRF E++ HQ F+EPEG T Sbjct: 245 AYTNPRSHDIIRGGLDRSPLYAGIIEGIGPRYCPSIEDKVVRFPEKDRHQTFIEPEGRET 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 VYP+G+ST+LP +IQ F R+I GLE+V I+RP YAIEYDY+NP +L +LETK + Sbjct: 305 VEVYPSGMSTSLPIDIQWAFYRSIEGLERVEIMRPAYAIEYDYVNPIQLHASLETKLVRN 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQINGT+GYEEAAAQGL+AGIN+A + D + R+++YIGVMIDDL + G E Sbjct: 365 LYHAGQINGTSGYEEAAAQGLMAGINAALRVKGRDPLVLGRSEAYIGVMIDDLVTLGTKE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RL G ++G + E K F + + + S L+ L Sbjct: 425 PYRMFTSRAEYRLLLREDNADLRLREKGHEVGLVPEALYKSF---LAKKELIDSELERLC 481 Query: 483 LTSKNLSSTSISFKQDG-----KTRTAYE-FLSYPDFSIQNLFSICPDARKFSSLVIERL 536 S+ Q+ + +YE L PDF+ ++L + P+ V E+L Sbjct: 482 RERLTPSAAGEELLQEWDLVGIQNAISYEQLLRRPDFTCRDLSRVYPEIMALPEQVREQL 541 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y Y RQ+ + + E IP D DY ++ LS E++EKL+ +P L QAS Sbjct: 542 EIQIKYKGYIQRQLEQVERSARLETSKIPDDMDYGTISGLSTEVREKLARFRPDTLGQAS 601 Query: 597 KIEGMTPAALNLLLIYIK 614 +I G+TPA + +L I +K Sbjct: 602 RIPGVTPAGITILSIALK 619 >gi|296114340|ref|ZP_06832994.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Gluconacetobacter hansenii ATCC 23769] gi|295979101|gb|EFG85825.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Gluconacetobacter hansenii ATCC 23769] Length = 624 Score = 585 bits (1509), Expect = e-165, Method: Compositional matrix adjust. Identities = 305/618 (49%), Positives = 410/618 (66%), Gaps = 6/618 (0%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 N +YDVIVIGGGHAGCEAAA AA+ GA T L+TH+ +T+G MSCNPAIGG+GKGHLVREI Sbjct: 6 NATYDVIVIGGGHAGCEAAAAAARCGARTMLLTHQRATVGVMSCNPAIGGIGKGHLVREI 65 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DALDGLMG+ AD AGI F++LN KGPAV GPR QADR LY+ A+ + E L++++G Sbjct: 66 DALDGLMGKAADRAGIHFKLLNRSKGPAVHGPRAQADRSLYQRAILDLLAETEGLEIVEG 125 Query: 123 EVAGFNTEK-NIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 + + + +V +D + VVLT GTFLRGVIH+G PAGR+G++P+ Sbjct: 126 AAGDLVVDDGHTVRGVVCEDGRIFHAGAVVLTAGTFLRGVIHVGHDSQPAGRVGEAPARR 185 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L GRLKTGTPAR+ +I WD + D PFS MTD ITN Q+ C Sbjct: 186 LGERLQALGLRMGRLKTGTPARIARDSIDWDALAEDRGDAIPEPFSRMTDTITNPQVSCR 245 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT T TH II E++ SAIY G I GPRYCPSIEDK+VRF +R+ HQIFLEPE L Sbjct: 246 ITATTPRTHDIIREHLHLSAIYGGAISGRGPRYCPSIEDKVVRFAQRDSHQIFLEPEALP 305 Query: 302 TD----VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 + +VYPNGIST+LP ++Q Q + +IPGLE+ I+RPGYA+EYDY++P+EL P LE Sbjct: 306 DNPGGGLVYPNGISTSLPADVQEQMLHSIPGLERCRIVRPGYAVEYDYVDPRELTPALEL 365 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 K + GLFLAGQ+NGTTGYEEA AQG+VAGIN+AR++ + R +YIGVMIDDLT+ Sbjct: 366 KSLPGLFLAGQVNGTTGYEEAGAQGIVAGINAARRAAGEGAVTLDRGTAYIGVMIDDLTT 425 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL 477 +GV EPYRMFTSRAEYR++LR DNAD RLTP+GM GCIG R++RFA+ + Sbjct: 426 QGVSEPYRMFTSRAEYRLTLRADNADLRLTPLGMAWGCIGPARRQRFAEEQAAIDMAMER 485 Query: 478 LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 ++ + L I+ DG+ R+ + ++ + + ++ P S V + + Sbjct: 486 ARTDTYPPETLRREGITVSADGRARSLLDVMATGAL-MDVVENVAPWVGSLSPRVRQHVA 544 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 E+ Y+ Y RQ E +++ + + ++P D DY ++ LS E++E+LS +P A + Sbjct: 545 TEARYSGYLSRQEREIRQLANDGRLVLPHDLDYHAIGGLSTEMQERLSQARPVTFGAAQR 604 Query: 598 IEGMTPAALNLLLIYIKK 615 I G+TP+AL +L ++++ Sbjct: 605 IPGITPSALVAVLSHVRQ 622 >gi|68171317|ref|ZP_00544716.1| Glucose-inhibited division protein A subfamily [Ehrlichia chaffeensis str. Sapulpa] gi|88657925|ref|YP_507179.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ehrlichia chaffeensis str. Arkansas] gi|123493607|sp|Q2GHA4|MNMG_EHRCR RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|67999268|gb|EAM85919.1| Glucose-inhibited division protein A subfamily [Ehrlichia chaffeensis str. Sapulpa] gi|88599382|gb|ABD44851.1| glucose inhibited division protein A [Ehrlichia chaffeensis str. Arkansas] Length = 625 Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust. Identities = 307/615 (49%), Positives = 420/615 (68%), Gaps = 7/615 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+VIGGGHAGCEAAA AA++GA T LITH TSTIG MSCNPAIGG+ KG +VRE+DAL Sbjct: 4 YDVVVIGGGHAGCEAAAAAARIGAKTLLITHSTSTIGEMSCNPAIGGIAKGTVVREVDAL 63 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGLMG+V D A I +LN KGPAV GPR QADR++Y+ MQ IL+ NL V++ V Sbjct: 64 DGLMGKVIDKASINSSILNRSKGPAVWGPRAQADRKIYKNTMQDIILNYPNLTVLEASVE 123 Query: 126 GFNT----EKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 F EK + +++ D +I ++LTTGTFL+G IHIG PAGR G+ PS Sbjct: 124 DFTITEKDEKFTVETVITSDQQVIYTKKLILTTGTFLQGTIHIGSYNTPAGRFGEQPSIG 183 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L + K++F GRL+TGTP RLD +I + ++Q D PFS+M+ I QI C Sbjct: 184 LAKTLEKYNFKLGRLRTGTPPRLDINSINFSGLQEQKGDSEPSPFSYMSQSIDLPQISCY 243 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSY-GPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +T TN TH +I N+ H A S +K PRYCPSIE+K+ RF ERN HQ+FLEPEGL Sbjct: 244 LTATNTRTHEVIKNNL-HRAAASNSLKDIKAPRYCPSIEEKVRRFSERNSHQVFLEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 +++++YPNGI+T+ P ++Q++ ++TIPGLEKVNIIR GY++EY++I+P+EL+ TLETKKI Sbjct: 303 DSNIIYPNGITTSSPLDVQYEMLKTIPGLEKVNIIRSGYSVEYNFIDPRELYHTLETKKI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSN-KLDCICFSRTDSYIGVMIDDLTSKG 419 SGL+ AGQINGTTGYEEAA QG++AGIN+A N K + R+D+YIGVMIDDL + G Sbjct: 363 SGLYFAGQINGTTGYEEAAGQGIIAGINAALSLNSKYEPFILKRSDAYIGVMIDDLVTLG 422 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYR+FTSRAEYR+ LR DNAD RLT +G ++ + +R QE L ++LK Sbjct: 423 TSEPYRLFTSRAEYRLRLRSDNADLRLTELGYQISVVSSKRYTILKNKKQEIITLTNILK 482 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 +++ T L+ +I QDG R+ ++ L +P+ +++ + IC ++F+ V E++ IE Sbjct: 483 NIITTPTQLARHNIPISQDGVRRSIFDLLGHPNINMEIVSRICNTVKEFNKNVAEQVAIE 542 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + YA Y RQ + K EE IP + ++S + LS E++EKL +KP ++ A +I Sbjct: 543 AKYAPYFDRQDADIKAFLEEENTHIPHNIEFSQIHGLSKEIQEKLEYIKPLSIGSARRIP 602 Query: 600 GMTPAALNLLLIYIK 614 G+TPAA+ +LIY++ Sbjct: 603 GITPAAITNILIYLR 617 >gi|254468635|ref|ZP_05082041.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [beta proteobacterium KB13] gi|207087445|gb|EDZ64728.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [beta proteobacterium KB13] Length = 634 Score = 583 bits (1503), Expect = e-164, Method: Compositional matrix adjust. Identities = 294/624 (47%), Positives = 404/624 (64%), Gaps = 4/624 (0%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 + +YDVIVIGGGHAG EA+ AA++G T LITH T+G MSCNP+IGG+GKGHLV+EI Sbjct: 5 DSNYDVIVIGGGHAGTEASLAAARMGQKTLLITHNIDTLGQMSCNPSIGGIGKGHLVKEI 64 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G+M + AD AGI FR+LN KGPAVR R QADR LYR A++ + +Q+NL + Q Sbjct: 65 DALGGVMAKAADQAGIHFRMLNASKGPAVRATRAQADRVLYRKAIKHHLENQDNLSIFQQ 124 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 V +++ + +V + +V+LT GTFL GV+H+G AGR GD S +L Sbjct: 125 PVDDLIIKEDQVQGVVTESGIHFYAKSVILTAGTFLDGVVHVGLKNYQAGRAGDPSSKTL 184 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECG 241 + + + GRLKTGTP R+DG++I + E+Q D FS + + + QI C Sbjct: 185 AHRLNQLNLPVGRLKTGTPPRIDGRSIDYSVMEEQPGDAPTPYFSLQSPLLEHPEQISCW 244 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT TN TH II + S +Y+G I+ GPRYCPSIEDKI RF +++ HQIFLEPEGL Sbjct: 245 ITHTNSATHNIIRSGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFADKDSHQIFLEPEGLT 304 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T +YPNGIST+LP ++Q++ +R+I GLE+ I RPGYAIEY+Y +P+ L +L+TK I Sbjct: 305 THEIYPNGISTSLPFDVQYELVRSIKGLEQAYITRPGYAIEYNYFDPRNLQSSLQTKTIE 364 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQINGTTGYEEAAAQGLVAGIN+A K+ C R +SYIGVMIDDL ++GV Sbjct: 365 GLFFAGQINGTTGYEEAAAQGLVAGINAALKAQNKPSWCPKREESYIGVMIDDLITRGVT 424 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+ LR DNAD RLT G LG + + + RF K Q + +++K Sbjct: 425 EPYRMFTSRAEYRLLLREDNADQRLTSAGYDLGVVNQTQYDRFMKKDQGIHSCLNIMKKT 484 Query: 482 VLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 V + + + I K+ + + Y+ + P+ + + L + + +IE+ +I Sbjct: 485 VTKPEAIPADDQQRIFGKKLEREYSIYDLIKRPNVNWKQLQDFMRLDQDYDDQIIEQAEI 544 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + Y+ Y RQ E +I+ + IPK+ ++ + LSNE +K + P N+ QASKI Sbjct: 545 SAKYSGYISRQSDEILKIQSQYAMKIPKNMNFEDISGLSNEAVQKFKDVMPENIQQASKI 604 Query: 599 EGMTPAALNLLLIYIKKNTVKLNE 622 G+TPA + LL++Y+KK+ VK ++ Sbjct: 605 SGITPANIALLVVYLKKSAVKQDK 628 >gi|58698629|ref|ZP_00373524.1| glucose-inhibited division protein A [Wolbachia endosymbiont of Drosophila ananassae] gi|225630672|ref|YP_002727463.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Wolbachia sp. wRi] gi|254811524|sp|C0R430|MNMG_WOLWR RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|58534851|gb|EAL58955.1| glucose-inhibited division protein A [Wolbachia endosymbiont of Drosophila ananassae] gi|225592653|gb|ACN95672.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Wolbachia sp. wRi] Length = 644 Score = 583 bits (1502), Expect = e-164, Method: Compositional matrix adjust. Identities = 301/618 (48%), Positives = 394/618 (63%), Gaps = 25/618 (4%) Query: 26 KLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNV 85 +LG +T LITHK STIG MSCNPAIGG+ KG +VRE+DALDG+MGR D A I +LN Sbjct: 24 RLGTNTLLITHKISTIGEMSCNPAIGGVAKGVVVREVDALDGIMGRAIDRASIHSVILNS 83 Query: 86 KKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKN-----IISSIVMQ 140 +G AV GPR QADR+LY+ A+Q IL+ NL V + V F E N I +++ Sbjct: 84 SRGAAVWGPRAQADRKLYKQAIQEIILNYNNLTVKEESVDDFLIESNNNGELCIKAVITS 143 Query: 141 DNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGT 200 I VVLTTGTFL+GVIHIG+ P+GRMGD P+ L N+ K+DF GRL+TGT Sbjct: 144 SGEHILTGKVVLTTGTFLQGVIHIGEQTTPSGRMGDKPAVELANTLNKYDFRLGRLRTGT 203 Query: 201 PARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHS 260 P RLD TI W ++Q D +PFS++T+KI Q+ C IT TN TH+II EN+ S Sbjct: 204 PPRLDRGTINWSILQEQVGDNPPVPFSYLTEKINQPQVSCFITHTNENTHKIIRENLHRS 263 Query: 261 AI-YSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQ 319 A Y D+ PRYCPSIE K+ +F E++ HQIFLEPEGL+ D VYPNGIS +LP E+Q Sbjct: 264 ASSYLSDV--VAPRYCPSIEVKVKKFAEKSSHQIFLEPEGLDDDTVYPNGISNSLPIEVQ 321 Query: 320 HQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAA 379 + I++I GLE I+RPGYA+EYDYI+P+ELF TLETKK+ GL+ AGQINGTTGYEEAA Sbjct: 322 REMIKSIKGLENAEILRPGYAVEYDYIDPRELFHTLETKKVKGLYFAGQINGTTGYEEAA 381 Query: 380 AQGLVAGINSARKS-NKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLR 438 QG++AGIN+A + K + RTDSYIGVMIDDL +KGV+EPYR+FTSRAEYR+++R Sbjct: 382 GQGIIAGINAALSAFEKKESFVLHRTDSYIGVMIDDLVTKGVIEPYRLFTSRAEYRLAIR 441 Query: 439 PDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQD 498 DNAD RLT G + + R ++ L L SL +T + L S I D Sbjct: 442 SDNADRRLTQKGYDISLVSHERYSVLQNKLESIKQLEEKLGSLTITPEQLRSYGIKISYD 501 Query: 499 GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL----------------VIERLQIESSY 542 G +TA + LSYP+ L I P+ + + E ++IE+ Y Sbjct: 502 GIRKTALDLLSYPNIDWNKLQEIWPELSSVTRWNDKMGHTKADNRAKNEICEAVEIEAKY 561 Query: 543 AAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMT 602 Y RQ + K ++ E IP DF+YS + LS+E+ EKL +KP + A +I+G+T Sbjct: 562 KPYLIRQEADMKFLREEINTQIPIDFNYSQVKGLSSEVIEKLQTIKPATIGIAKQIQGIT 621 Query: 603 PAALNLLLIYIKKNTVKL 620 PAA+ +L+Y++ K+ Sbjct: 622 PAAIVSILVYLRNRKTKV 639 >gi|118497772|ref|YP_898822.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Francisella tularensis subsp. novicida U112] gi|194323744|ref|ZP_03057520.1| glucose-inhibited division protein A [Francisella tularensis subsp. novicida FTE] gi|208779835|ref|ZP_03247179.1| glucose-inhibited division protein A [Francisella novicida FTG] gi|166222934|sp|A0Q753|MNMG_FRATN RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|118423678|gb|ABK90068.1| glucose inhibited division protein A [Francisella novicida U112] gi|194322108|gb|EDX19590.1| glucose-inhibited division protein A [Francisella tularensis subsp. novicida FTE] gi|208744290|gb|EDZ90590.1| glucose-inhibited division protein A [Francisella novicida FTG] Length = 627 Score = 583 bits (1502), Expect = e-164, Method: Compositional matrix adjust. Identities = 310/619 (50%), Positives = 407/619 (65%), Gaps = 12/619 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAG EAA+ +A++GA T L+TH TIG MSCNPAIGG+GKGHLV+EIDA+ Sbjct: 7 YDVIVVGGGHAGVEAASASARIGAKTLLLTHNIDTIGQMSCNPAIGGIGKGHLVKEIDAM 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+M + D AGIQFR+LN +KGPAVR R QADR LY+ A+ I +QENLD+ Q V Sbjct: 67 GGVMAKAIDMAGIQFRILNSRKGPAVRATRAQADRVLYKKAINSLINNQENLDIFQDSVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E N + + + R VVLT GTFL G IHIGK+ GR GD PSN+L Sbjct: 127 DLVVENNTVCGAITKTGITFRAKKVVLTVGTFLGGKIHIGKVSNAGGRAGDQPSNALAAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITN-RQIECGIT 243 F RLKTGTP R+D +++ + E Q D FSF + KI + RQI C IT Sbjct: 187 LRSLPFRVDRLKTGTPPRIDRRSVDFSVMEVQHGDNPTPYFSFFSKGKIEHPRQIPCYIT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN ETH+II +N+ SA+YSG I+ GPRYCPSIEDK+VRF ++ HQIF+EPEGLN+ Sbjct: 247 YTNNETHKIITDNLDKSAMYSGLIEGIGPRYCPSIEDKVVRFADKERHQIFVEPEGLNSI 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNG+ST+LP E+Q +IR+I G EK I+RPGYAIEYD+ +P++L PTLETK I L Sbjct: 307 ELYPNGLSTSLPFEVQCNYIRSIKGFEKAFIMRPGYAIEYDFFDPRDLKPTLETKHIKNL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGTTGYEEA AQGLVAGIN+A + +R DSYIGV+IDDL +KG EP Sbjct: 367 YFAGQINGTTGYEEAGAQGLVAGINAAISIDSDKSWYPTRADSYIGVLIDDLITKGTKEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFL---RSLLKS 480 YRMFTSRAEYR+ LR DNAD RL+ +LG + + Q+ F I + N + +++K+ Sbjct: 427 YRMFTSRAEYRLILREDNADLRLSDKACELGLLSKEDQQHF---ISKKNAIIENIAMMKN 483 Query: 481 LVLTSKNLSSTSISFKQDGK-TR--TAYEFLSYPDFSIQNLFSICP-DARKFSSLVIERL 536 + + + + D K TR T ++ L P+ L I + VIE++ Sbjct: 484 TWIGPQTQKARDLEKFLDKKMTRESTLFDLLKRPEIDYSKLQQISELNLNLQDEAVIEQI 543 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I + Y+ Y RQ + ++ E++ IP DF+YS + LSNE+ +KL+ KP L +AS Sbjct: 544 EISAKYSGYIERQNKDIEKTATLEQKAIPTDFNYSQVKGLSNEVLQKLTEQKPTTLGEAS 603 Query: 597 KIEGMTPAALNLLLIYIKK 615 +I G+TPAA++LL IY+KK Sbjct: 604 RIPGITPAAISLLTIYMKK 622 >gi|85709801|ref|ZP_01040866.1| glucose-inhibited division protein A [Erythrobacter sp. NAP1] gi|85688511|gb|EAQ28515.1| glucose-inhibited division protein A [Erythrobacter sp. NAP1] Length = 617 Score = 582 bits (1501), Expect = e-164, Method: Compositional matrix adjust. Identities = 283/610 (46%), Positives = 403/610 (66%), Gaps = 1/610 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DV+VIGGGHAG EAA AA++GA T L++ +G+MSCNPAIGGLGKGHLVRE+DAL Sbjct: 4 FDVLVIGGGHAGVEAACAAARMGARTGLVSFDLEAVGAMSCNPAIGGLGKGHLVREVDAL 63 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DG++G ADA I +R+LN KG AV GPR QADR +++ A+Q+ Q NL +++GE A Sbjct: 64 DGVIGIAADAGAIHYRMLNRSKGSAVWGPRVQADRVMFKAAVQQIARQQRNLTLVEGEAA 123 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + + ++ + + D ++++ V+L TGTFL GV+ G+ + GR+G++ + L Sbjct: 124 ALSIKGGAVAGLELADGTLLQAPRVILCTGTFLGGVLFRGEERFEGGRIGENAATRLAAQ 183 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 D RLKTGTP RLDG+TI W + E+Q +D+ S +T + N Q+ C ITRT Sbjct: 184 LRSADLPMARLKTGTPPRLDGRTIDWSQLEEQPSDDESWTMSPLTKERQNPQVFCAITRT 243 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 H II +N+ S ++SG I + GPRYCPSIEDKI RFG+R+GHQ+FLEPEGL T +V Sbjct: 244 TQVAHDIIRDNLDRSPLFSGAIDAAGPRYCPSIEDKIHRFGDRDGHQVFLEPEGLGTHLV 303 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YPNGIST+LP ++Q +R +PGL V + PGYA+EYD+I+P+ L P L+ + I GL+ Sbjct: 304 YPNGISTSLPVDVQQAMLRAMPGLASVEMAVPGYAVEYDHIDPRALTPDLQLRAIPGLYC 363 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAAAQGLVAG+ +A + +R +SYI VMIDDLT +GV EPYR Sbjct: 364 AGQINGTTGYEEAAAQGLVAGLEAAASALGAMAPALNRANSYIAVMIDDLTLQGVSEPYR 423 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 M TSRAEYR+ LR +NA +RLT +G++ GCIG+ R K F++ + SL + + Sbjct: 424 MLTSRAEYRLRLRANNASSRLTGLGLEAGCIGDDRAKWFSERQSSQTTVMEAF-SLSIRA 482 Query: 486 KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAY 545 + L+ ++ ++DG +T E+L + +I L PDA ++E + +++YA Y Sbjct: 483 RELADAGLNVRRDGGEKTIEEWLRHDGVTIDTLRPWLPDATLEDRQILEEMAEDAAYAPY 542 Query: 546 TGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAA 605 RQ E ++++ E+ + DF Y +P LSNE+ E+LS P L A ++ G+TPAA Sbjct: 543 LARQEAELRDLRASEELPLASDFPYGEVPGLSNEMVERLSSAAPTTLAAAGRVPGVTPAA 602 Query: 606 LNLLLIYIKK 615 L+ LL++ ++ Sbjct: 603 LSALLVHARR 612 >gi|329113882|ref|ZP_08242653.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [Acetobacter pomorum DM001] gi|326696892|gb|EGE48562.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [Acetobacter pomorum DM001] Length = 632 Score = 582 bits (1501), Expect = e-164, Method: Compositional matrix adjust. Identities = 313/622 (50%), Positives = 412/622 (66%), Gaps = 10/622 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +N++YDVIV+GGGHAGCEAAA AA+ GA T L+TH +T+G+MSCNPAIGG+GKGHLVRE Sbjct: 7 MNKAYDVIVVGGGHAGCEAAAAAARCGAKTLLLTHHKNTVGAMSCNPAIGGIGKGHLVRE 66 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DALDG+M R AD AGI F++LN KGPAV+GPR QADR LYR A+Q + LD+ + Sbjct: 67 VDALDGVMARAADRAGIHFKLLNRSKGPAVQGPRAQADRLLYRQAVQDILADTAGLDIEE 126 Query: 122 GEVAGF-NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 V ++N ++ + +D VVLTTGTFL GVIHIG PAGR+G+ PS Sbjct: 127 AAVTDLIYDDQNRVAGVACEDGRQWAAGAVVLTTGTFLDGVIHIGHKSQPAGRIGEQPSV 186 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 +L + K RLKTGTPARL TI W D PFS +T ITN Q+ C Sbjct: 187 ALASRLKKLGLRIARLKTGTPARLKRDTIDWASLAVDRGDISPEPFSRLTASITNPQMVC 246 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 GIT T +TH II E++ SA+Y G I GPRYCPSIEDK+VRF E+ GHQIFLEPE L Sbjct: 247 GITTTVPKTHDIIREHLHLSAVYGGAISGRGPRYCPSIEDKVVRFSEKTGHQIFLEPEAL 306 Query: 301 ----NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLE 356 D+VYPNGIST+LP ++Q I +IPGLEK I + GYA+EYDY++P+EL +LE Sbjct: 307 PDHEGGDLVYPNGISTSLPADVQDAMIHSIPGLEKAVIAQYGYAVEYDYVDPRELTVSLE 366 Query: 357 TKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 KK LFLAGQINGTTGYEEA AQGL+AG+N+AR++ + R +Y+GVMIDDLT Sbjct: 367 LKKCPNLFLAGQINGTTGYEEAGAQGLLAGVNAARRAGGQQAVSLDRGKAYLGVMIDDLT 426 Query: 417 SKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRS 476 ++GV EPYRMFTSRAEYR++LR DNAD RLTPIG+ GCIG R++ FA+ ++E L Sbjct: 427 TQGVSEPYRMFTSRAEYRLTLRADNADVRLTPIGLDWGCIGAERREAFARDMREIEQLTQ 486 Query: 477 LLKSLVLTSKNLSSTSISFKQDGKTRTAYEFL--SYPDFSIQNLFSICPDARKFSSLVIE 534 +S + L+ I QDG+ R E + + P+ +I+ L P +++S Sbjct: 487 KAESESWPPQALAQVGIKVAQDGRRRNLLEVIGQAVPENTIEAL---APWVQEYSERARS 543 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 ++ E+ Y+ Y RQ E K+++ E + P+D D+ + LS E++E+L +P + Sbjct: 544 YVRTEARYSGYLVRQKREIKQLEAETEIRFPQDMDFRKIGGLSAEMQERLEQARPESFGA 603 Query: 595 ASKIEGMTPAALNLLLIYIKKN 616 A +I G+TP+AL +L Y+KK Sbjct: 604 AQRIPGITPSALMAVLAYLKKG 625 >gi|197120416|ref|YP_002140843.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Geobacter bemidjiensis Bem] gi|197089776|gb|ACH41047.1| tRNA (5-carboxymethylaminomethyl-2-thio-U34)- formylglycinetransferase/reductase [Geobacter bemidjiensis Bem] Length = 624 Score = 582 bits (1501), Expect = e-164, Method: Compositional matrix adjust. Identities = 305/618 (49%), Positives = 401/618 (64%), Gaps = 9/618 (1%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 +++YDVIV+G GHAGCEAA AA++G ST ++T I MSCNPAIGGL KGHLV+EI Sbjct: 5 DKTYDVIVVGAGHAGCEAALAAARMGRSTLMLTINLDAIALMSCNPAIGGLAKGHLVKEI 64 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G MGR DA GIQFRVLN KKGPAVR R QAD++LYRL M+ + Q+NLD+ Q Sbjct: 65 DALGGEMGRNIDATGIQFRVLNTKKGPAVRASRAQADKQLYRLRMKHVMEQQDNLDLKQV 124 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 EV E ++ + + TVVLTTGTF+RG+IHIG + P GR GD PS L Sbjct: 125 EVTDLYLEDGSVAGVDTKGGVRYLSRTVVLTTGTFMRGLIHIGLVHYPGGRAGDLPSIGL 184 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGI 242 + F+ GRLKTGTPARLDG+TI +++ E Q DE IPFSF T++I +Q+ C I Sbjct: 185 SDGLKDVGFEVGRLKTGTPARLDGRTIDFERLEAQHGDENPIPFSFSTERIEQQQVPCHI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 TN ++H II + S +Y+G I+ GPRYCPSIEDK+VRF E++ HQ F+EPEG T Sbjct: 245 AYTNPKSHDIIRSGLDRSPLYAGIIEGIGPRYCPSIEDKVVRFPEKDRHQTFIEPEGRET 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 VYP+G+ST+LP +IQ F R+I GLE+V I+RP YAIEYDY+NP +L +LETK + Sbjct: 305 VEVYPSGMSTSLPIDIQWAFYRSIEGLERVEIMRPAYAIEYDYVNPIQLHASLETKLVRN 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQINGT+GYEEAAAQGL+AGIN+A + + + R+++YIGVMIDDL + G E Sbjct: 365 LYNAGQINGTSGYEEAAAQGLMAGINAALRVQGKEPLVLGRSEAYIGVMIDDLVTLGTKE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RL G +G + E + ++ + + S L L Sbjct: 425 PYRMFTSRAEYRLLLREDNADLRLREKGHDIGLVPE---SLYHSFLAKKELIDSELDRLS 481 Query: 483 LTSKNLSSTSISFKQDG-----KTRTAYE-FLSYPDFSIQNLFSICPDARKFSSLVIERL 536 S+ Q+ + +YE L PDF+ +L I P+ + V E+L Sbjct: 482 RERLTPSAAGEELLQEWDLVGIQNAISYEQLLRRPDFTCSDLSRIYPEIMELPETVREQL 541 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y Y RQ+ + E IP D DYS++P+LS E++EKL +P L QAS Sbjct: 542 EIQIKYKGYIERQLEQVARAARLESTTIPADMDYSTVPSLSAEVREKLVRFRPDTLGQAS 601 Query: 597 KIEGMTPAALNLLLIYIK 614 +I G+TPA + +L I +K Sbjct: 602 RIPGVTPAGITILSIALK 619 >gi|52843084|ref|YP_096883.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|81170552|sp|Q5ZRJ2|MNMG_LEGPH RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|52630195|gb|AAU28936.1| glucose inhibited division protein A [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 624 Score = 582 bits (1499), Expect = e-164, Method: Compositional matrix adjust. Identities = 304/616 (49%), Positives = 402/616 (65%), Gaps = 7/616 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAG EAA AA+LG T L+TH +G MSCNPAIGG+GKGHLV+EIDAL Sbjct: 7 YDVIVVGGGHAGTEAALAAARLGVKTLLLTHNIDLLGQMSCNPAIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DG M + AD AGIQFR+LN KGPAVR R QADR LYR A++ ++ SQ NL + Q V Sbjct: 67 DGAMAKAADQAGIQFRILNASKGPAVRATRAQADRVLYRKAIRTQLQSQANLTIFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E +++ +V Q ++ VVLT GTFL G IH+G + GR GD PS +L S Sbjct: 127 DLKIEGGLVTGVVTQMGLTLKARAVVLTVGTFLGGKIHVGMNQYAGGRAGDPPSIALSKS 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 D GRLKTGTP R+D +TI + + +Q D + FS++ + +Q+ C IT Sbjct: 187 LRDLDLPVGRLKTGTPPRIDRRTIDFSQMVEQPGDTPVPVFSYLGAASDHPQQVPCHITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T TH II N+ S +Y+G I+ GPRYCPSIEDKIVRF ++ HQIF+EPEGL T+ Sbjct: 247 TTEATHDIIRNNLDKSPMYAGVIEGVGPRYCPSIEDKIVRFADKTSHQIFVEPEGLTTEE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP E+Q QF+RTI G E +I RPGYAIEYDY +P+ L L+TK I LF Sbjct: 307 IYPNGISTSLPFEVQVQFVRTIKGFENAHITRPGYAIEYDYFDPRGLTSFLQTKAIPNLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQG++AG+N+A + + C R ++YIGV+IDDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGIIAGMNAALQIKDQELWCPRRDEAYIGVLIDDLITCGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL-KSLVL 483 RMFTSRAEYR+ LR DNAD RLT G +LG +G+ R F+K + ++LL S V Sbjct: 427 RMFTSRAEYRLLLREDNADLRLTEKGRQLGLVGDERWDSFSKKREAIESTQALLYNSWVR 486 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL---VIERLQIES 540 N F A EFL P+ + Q+L + D L + E+++I++ Sbjct: 487 VHHNDLFKETLFNPMQHDCRAVEFLKRPEINYQHLLMM--DDLNLPELPQEITEQIEIQN 544 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 YA Y RQ E ++++ E L+P+ DY+ + LS+E+ +KL+ +KP +L QA +I G Sbjct: 545 KYAGYIDRQQQEIEKLRKHENTLLPETLDYNDVVGLSSEVIQKLNRIKPTSLAQAGRISG 604 Query: 601 MTPAALNLLLIYIKKN 616 +TPAAL+LLL+++KK+ Sbjct: 605 VTPAALSLLLVHLKKS 620 >gi|332678488|gb|AEE87617.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Francisella cf. novicida Fx1] Length = 627 Score = 582 bits (1499), Expect = e-164, Method: Compositional matrix adjust. Identities = 309/619 (49%), Positives = 407/619 (65%), Gaps = 12/619 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAG EAA+ +A++GA T L+TH TIG MSCNPAIGG+GKGHLV+EIDA+ Sbjct: 7 YDVIVVGGGHAGVEAASASARIGAKTLLLTHNIDTIGQMSCNPAIGGIGKGHLVKEIDAM 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+M + D AGIQFR+LN +KGPAVR R QADR LY+ A+ I +QENLD+ Q V Sbjct: 67 GGVMAKAIDMAGIQFRILNSRKGPAVRATRAQADRVLYKKAINSLINNQENLDIFQDSVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E N + + + R VVLT GTFL G IHIGK+ GR GD PSN+L Sbjct: 127 DLVVENNTVCGAITKTGITFRAKKVVLTVGTFLGGKIHIGKVSNAGGRAGDQPSNALAAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITN-RQIECGIT 243 F RLKTGTP R+D +++ + E Q D FSF + KI + +QI C IT Sbjct: 187 LRSLPFRVDRLKTGTPPRIDRRSVDFSVMEVQHGDNPTPYFSFFSKGKIEHPQQIPCYIT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN ETH+II +N+ SA+YSG I+ GPRYCPSIEDK+VRF ++ HQIF+EPEGLN+ Sbjct: 247 YTNYETHKIITDNLDKSAMYSGLIEGIGPRYCPSIEDKVVRFADKERHQIFVEPEGLNSI 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNG+ST+LP E+Q +IR+I G EK I+RPGYAIEYD+ +P++L PTLETK I L Sbjct: 307 ELYPNGLSTSLPFEVQCNYIRSIKGFEKAFIMRPGYAIEYDFFDPRDLKPTLETKHIKNL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGTTGYEEA AQGLVAGIN+A + +R DSYIGV+IDDL +KG EP Sbjct: 367 YFAGQINGTTGYEEAGAQGLVAGINAAISIDSDKSWYPTRADSYIGVLIDDLITKGTKEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFL---RSLLKS 480 YRMFTSRAEYR+ LR DNAD RL+ +LG + + Q+ F I + N + +++K+ Sbjct: 427 YRMFTSRAEYRLILREDNADLRLSDKACELGLLSKEDQQHF---ISKKNAIIENIAMMKN 483 Query: 481 LVLTSKNLSSTSISFKQDGK-TR--TAYEFLSYPDFSIQNLFSICP-DARKFSSLVIERL 536 + + + + D K TR T ++ L P+ L I + VIE++ Sbjct: 484 TWIGPQTQKARDLEKFLDKKMTRESTLFDLLKRPEIDYSKLQQISELNLNLQDEAVIEQI 543 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I + Y+ Y RQ + ++ E++ IP DF+YS + LSNE+ +KL+ KP L +AS Sbjct: 544 EISAKYSGYIERQNKDIEKTATLEQKAIPTDFNYSQVKGLSNEVLQKLTEQKPTTLGEAS 603 Query: 597 KIEGMTPAALNLLLIYIKK 615 +I G+TPAA++LL IY+KK Sbjct: 604 RIPGITPAAISLLTIYMKK 622 >gi|254373130|ref|ZP_04988619.1| glucose inhibited division protein A [Francisella tularensis subsp. novicida GA99-3549] gi|151570857|gb|EDN36511.1| glucose inhibited division protein A [Francisella novicida GA99-3549] Length = 627 Score = 581 bits (1498), Expect = e-163, Method: Compositional matrix adjust. Identities = 307/616 (49%), Positives = 404/616 (65%), Gaps = 6/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAG EAA+ +A++GA T L+TH TIG MSCNPAIGG+GKGHLV+EIDA+ Sbjct: 7 YDVIVVGGGHAGVEAASASARIGAKTLLLTHNIDTIGQMSCNPAIGGIGKGHLVKEIDAM 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+M + D AGIQFR+LN +KGPAVR R QADR LY+ A+ I +QENLD+ Q V Sbjct: 67 GGVMAKAIDMAGIQFRILNSRKGPAVRATRAQADRVLYKKAINSLINNQENLDIFQDSVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E N + + + R VVLT GTFL G IHIGK+ GR GD PSN+L Sbjct: 127 DLVVENNTVCGAITKTGITFRAKKVVLTVGTFLGGKIHIGKVSNAGGRAGDQPSNALAAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITN-RQIECGIT 243 F RLKTGTP R+D +++ + E Q D FSF + KI + +QI C IT Sbjct: 187 LRSLPFRVDRLKTGTPPRIDRRSVDFSVMEVQHGDNPTPYFSFFSKGKIEHPQQIPCYIT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN ETH+II +N+ SA+YSG I+ GPRYCPSIEDK+VRF ++ HQIF+EPEGLN+ Sbjct: 247 YTNNETHKIITDNLDKSAMYSGLIEGIGPRYCPSIEDKVVRFADKERHQIFVEPEGLNSI 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNG+ST+LP E+Q +IR+I G EK I+RPGYAIEYD+ +P++L PTLETK I L Sbjct: 307 ELYPNGLSTSLPFEVQCNYIRSIKGFEKAFIMRPGYAIEYDFFDPRDLKPTLETKHIKNL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGTTGYEEA AQGLVAGIN+A + +R DSYIGV+IDDL +KG EP Sbjct: 367 YFAGQINGTTGYEEAGAQGLVAGINAAISIDSDKSWYPTRADSYIGVLIDDLITKGTKEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RL+ +LG + + Q+ F + +++K+ + Sbjct: 427 YRMFTSRAEYRLILREDNADLRLSDKACELGLLSKEDQQHFISKKNDIIENIAMMKNTWI 486 Query: 484 TSKNLSSTSISFKQDGK-TR--TAYEFLSYPDFSIQNLFSICP-DARKFSSLVIERLQIE 539 + + + D K TR T ++ L P+ L I + VIE+++I Sbjct: 487 GPQTQKARDLEKFLDKKMTRESTLFDLLKRPEIDYSKLQQISELNLNLQDEAVIEQIEIS 546 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + Y+ Y RQ + ++ E++ IP DF+YS + LSNE+ +KL+ KP L +AS+I Sbjct: 547 AKYSGYIERQNKDIEKTATLEQKAIPTDFNYSQVKGLSNEVLQKLTEQKPTTLGEASRIP 606 Query: 600 GMTPAALNLLLIYIKK 615 G+TPAA++LL IY+KK Sbjct: 607 GITPAAISLLTIYMKK 622 >gi|54298881|ref|YP_125250.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Legionella pneumophila str. Paris] gi|81170551|sp|Q5X0Z8|MNMG_LEGPA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|53752666|emb|CAH14101.1| hypothetical protein lpp2948 [Legionella pneumophila str. Paris] Length = 624 Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust. Identities = 305/617 (49%), Positives = 406/617 (65%), Gaps = 9/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAG EAA AA+LG T L+TH +G MSCNPAIGG+GKGHLV+EIDAL Sbjct: 7 YDVIVVGGGHAGTEAALAAARLGVKTLLLTHNIDLLGQMSCNPAIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DG M + AD AGIQFR+LN KGPAVR R QADR LYR A++ ++ SQ NL + Q V Sbjct: 67 DGAMAKAADQAGIQFRILNASKGPAVRATRAQADRVLYRKAIRTQLQSQANLTIFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E +++ +V Q ++ VVLT GTFL G IH+G + GR GD PS +L S Sbjct: 127 DLKIEGGLVTGVVTQMGLTLKARAVVLTVGTFLGGKIHVGMNQYAGGRAGDPPSIALSKS 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQIECGITR 244 D GRLKTGTP R+D +TI + + +Q D + FS++ T +Q+ C IT Sbjct: 187 LRDLDLPVGRLKTGTPPRIDRRTIDFSQMVEQPGDTPVPVFSYLGTASDHPQQVPCHITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T TH II N+ S +Y+G I+ GPRYCPSIEDKIVRF ++ HQIF+EPEGL T+ Sbjct: 247 TTEATHDIIRNNLDKSPMYAGVIEGVGPRYCPSIEDKIVRFADKTSHQIFVEPEGLTTEE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP E+Q QF+RTI G E +I RPGYAIEYDY +P+ L L+TK I LF Sbjct: 307 IYPNGISTSLPFEVQVQFVRTIKGFENAHITRPGYAIEYDYFDPRGLTSFLQTKAIPNLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQG++AG+N+A + + C R ++YIGV+IDDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGIIAGMNAALQIKDQELWCPRRDEAYIGVLIDDLITCGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK-SLVL 483 RMFTSRAEYR+ LR DNAD RLT G +LG +G+ R + F+K + ++LL S V Sbjct: 427 RMFTSRAEYRLLLREDNADLRLTEKGRQLGLVGDERWESFSKKREAIESTQALLHNSWVR 486 Query: 484 TSKN-LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL---VIERLQIE 539 N L ++ R A EFL P+ + Q+L + D L + E+++I+ Sbjct: 487 VHHNDLFKEALLNPMQHDCRAA-EFLKRPEINYQHLLMM--DDLNLPELPQEITEQIEIQ 543 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + YA Y RQ E ++++ E ++P+ DY+ + LS+E+ +KL+ +KP +L QA +I Sbjct: 544 NKYAGYIDRQQQEIEKLRKHENTMLPETLDYNDVVGLSSEVIQKLNRIKPTSLAQAGRIS 603 Query: 600 GMTPAALNLLLIYIKKN 616 G+TPAAL+LLL+++KK+ Sbjct: 604 GVTPAALSLLLVHLKKS 620 >gi|254369131|ref|ZP_04985143.1| glucose-inhibited division protein A [Francisella tularensis subsp. holarctica FSC022] gi|157122081|gb|EDO66221.1| glucose-inhibited division protein A [Francisella tularensis subsp. holarctica FSC022] Length = 627 Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust. Identities = 310/619 (50%), Positives = 406/619 (65%), Gaps = 12/619 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAG EAA+ +A++GA T L+TH TIG MSCNPAIGG+GKGHLV+EIDA+ Sbjct: 7 YDVIVVGGGHAGVEAASASARIGAKTLLLTHNIDTIGQMSCNPAIGGIGKGHLVKEIDAM 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+M + D AGIQFR+LN +KGPAVR R QADR LY+ A+ I +QENLD+ Q V Sbjct: 67 GGVMAKAIDMAGIQFRILNSRKGPAVRATRAQADRVLYKKAINSLINNQENLDIFQDSVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E N + + + R VVLT GTFL G IHIGK+ GR GD PSN+L Sbjct: 127 DLVVENNTVCGAITKTGITFRAKKVVLTVGTFLGGKIHIGKVSNAGGRAGDQPSNALAAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITN-RQIECGIT 243 F RLKTGTP R+D +++ + E Q D FSF + KI + RQI C IT Sbjct: 187 LRSLPFRVDRLKTGTPPRIDRRSVDFSVMEVQHGDNPTPYFSFFSKGKIEHPRQIPCYIT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN ETH+II +N+ SA+YSG I+ GPRYCPSIEDK+VRF ++ HQIF+EPEGLN+ Sbjct: 247 YTNNETHKIITDNLDKSAMYSGLIEGIGPRYCPSIEDKVVRFADKERHQIFVEPEGLNSI 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNG+ST+LP E+Q +IR+I G EK I+RPGYAIEYD+ +P++L PTLETK I L Sbjct: 307 ELYPNGLSTSLPFEVQCNYIRSIKGFEKAFIMRPGYAIEYDFFDPRDLKPTLETKHIKNL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGTTGYEEA AQGLVA IN+A + +R DSYIGV+IDDL +KG EP Sbjct: 367 YFAGQINGTTGYEEAGAQGLVASINAAISIDSDKSWYPTRADSYIGVLIDDLITKGTKEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFL---RSLLKS 480 YRMFTSRAEYR+ LR DNAD RL+ +LG + + Q+ F I + N + S++K+ Sbjct: 427 YRMFTSRAEYRLILREDNADLRLSDKACELGLLSKEDQQHF---ISKKNAIIENISMMKN 483 Query: 481 LVLTSKNLSSTSISFKQDGK-TR--TAYEFLSYPDFSIQNLFSICP-DARKFSSLVIERL 536 + + + + D K TR T ++ L P+ L I + VIE++ Sbjct: 484 TWIGPQTQKARDLEKFLDKKMTRESTLFDLLKRPEIDYSKLQQISELNLNLQDDAVIEQI 543 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I + Y+ Y RQ + ++ E++ IP DF+YS + LSNE+ +KL+ KP L +AS Sbjct: 544 EISAKYSGYIERQNKDIEKTATLEQKAIPTDFNYSQVKGLSNEVLQKLTEQKPTTLGEAS 603 Query: 597 KIEGMTPAALNLLLIYIKK 615 +I G+TPAA++LL IY+KK Sbjct: 604 RIPGITPAAISLLTIYMKK 622 >gi|148361201|ref|YP_001252408.1| glucose inhibited division protein A [Legionella pneumophila str. Corby] gi|296108537|ref|YP_003620238.1| glucose inhibited division protein A [Legionella pneumophila 2300/99 Alcoy] gi|166222940|sp|A5II62|MNMG_LEGPC RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|148282974|gb|ABQ57062.1| glucose inhibited division protein A [Legionella pneumophila str. Corby] gi|295650439|gb|ADG26286.1| glucose inhibited division protein A [Legionella pneumophila 2300/99 Alcoy] gi|307611762|emb|CBX01470.1| hypothetical protein LPW_31581 [Legionella pneumophila 130b] Length = 624 Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust. Identities = 305/617 (49%), Positives = 405/617 (65%), Gaps = 9/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAG EAA AA+LG T L+TH +G MSCNPAIGG+GKGHLV+EIDAL Sbjct: 7 YDVIVVGGGHAGTEAALAAARLGVKTLLLTHNIDLLGQMSCNPAIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DG M + AD AGIQFR+LN KGPAVR R QADR LYR A++ ++ SQ NL + Q V Sbjct: 67 DGAMAKAADQAGIQFRILNASKGPAVRATRAQADRVLYRKAIRTQLQSQANLTIFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E +++ +V Q ++ VVLT GTFL G IH+G + GR GD PS +L S Sbjct: 127 DLKIEGGLVTGVVTQMGLTLKARAVVLTVGTFLGGKIHVGMNQYAGGRAGDPPSIALSKS 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQIECGITR 244 D GRLKTGTP R+D +TI + + +Q D + FS++ T +Q+ C IT Sbjct: 187 LRDLDLPVGRLKTGTPPRIDRRTIDFSQMVEQPGDTPVPVFSYLGTASDHPQQVPCHITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T TH II N+ S +Y+G I+ GPRYCPSIEDKIVRF ++ HQIF+EPEGL T+ Sbjct: 247 TTEATHDIIRNNLDKSPMYAGVIEGVGPRYCPSIEDKIVRFADKTSHQIFVEPEGLTTEE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP E+Q QF+RTI G E +I RPGYAIEYDY +P+ L L+TK I LF Sbjct: 307 IYPNGISTSLPFEVQVQFVRTIKGFENAHITRPGYAIEYDYFDPRGLTSFLQTKAIPNLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQG++AG+N+A + + C R ++YIGV+IDDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGIIAGMNAALQIKDQELWCPRRDEAYIGVLIDDLITCGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK-SLVL 483 RMFTSRAEYR+ LR DNAD RLT G +LG +G+ R F+K + ++LL S V Sbjct: 427 RMFTSRAEYRLLLREDNADLRLTEKGRQLGLVGDERWDSFSKKREAIESTQALLHNSWVR 486 Query: 484 TSKN-LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL---VIERLQIE 539 N L ++ R A EFL P+ + Q+L + D L + E+++I+ Sbjct: 487 VHHNDLFKEALLNPMQHDCRAA-EFLKRPEINYQHLLMM--DDLNLPELPQEITEQIEIQ 543 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + YA Y RQ E ++++ E ++P+ DY+ + LS+E+ +KL+ +KP +L QA +I Sbjct: 544 NKYAGYIDRQQQEIEKLRKHENTMLPETLDYNDVVGLSSEVIQKLNRIKPTSLAQAGRIS 603 Query: 600 GMTPAALNLLLIYIKKN 616 G+TPAAL+LLL+++KK+ Sbjct: 604 GVTPAALSLLLVHLKKS 620 >gi|209544085|ref|YP_002276314.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Gluconacetobacter diazotrophicus PAl 5] gi|209531762|gb|ACI51699.1| glucose inhibited division protein A [Gluconacetobacter diazotrophicus PAl 5] Length = 620 Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust. Identities = 310/618 (50%), Positives = 397/618 (64%), Gaps = 12/618 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAGCEAAA AA+ GA T L+TH+ TIG+MSCNPAIGG+GKGHLVREIDAL Sbjct: 5 YDVIVIGGGHAGCEAAAAAARCGARTLLLTHRRDTIGAMSCNPAIGGIGKGHLVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGLM R AD AGI F++LN KGPAV GPR QADR LYR A+Q + NLD+ +G Sbjct: 65 DGLMARAADRAGIHFKLLNRSKGPAVHGPRAQADRSLYRRAIQDLLAETANLDIAEGAAG 124 Query: 126 GFNTE-KNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + + +V +D R VVLT GTFLRGVIHIG PAGR+G+ P+++L Sbjct: 125 DLIVDDAGQAAGVVCEDGRQFRAGAVVLTAGTFLRGVIHIGHDSHPAGRVGEPPAHALGE 184 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 GRLKTGTPARLD +I WD + D PFS +T I N Q+ C IT Sbjct: 185 RLQALGLPMGRLKTGTPARLDRTSIDWDSLAEDRGDAVPEPFSRLTQAIDNPQLSCRITA 244 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL---- 300 T TH +I E++ SA+Y G I GPRYCPSIEDK+VRF ER+ HQIFLEPE L Sbjct: 245 TTPRTHALIREHLHLSAVYGGAIAGRGPRYCPSIEDKVVRFAERDSHQIFLEPEALPGNA 304 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 D+VYPNGIST+LP +IQ Q I +IPGLE+ I+RPGYA+EYDY++P+ L PTLE + Sbjct: 305 GGDLVYPNGISTSLPADIQEQLIHSIPGLERCRIVRPGYAVEYDYVDPRALAPTLELTAL 364 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 LFLAGQINGTTGYEEA AQGL+AG+N+AR++ + I R +Y+GVMIDDLT++GV Sbjct: 365 PRLFLAGQINGTTGYEEAGAQGLLAGLNAARRAGGGEGIAIDRGAAYLGVMIDDLTTQGV 424 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+SLR DNAD RLT G+ GC+G R F + + Sbjct: 425 SEPYRMFTSRAEYRLSLRADNADLRLTGQGIGWGCVGSARAHLFTAERDAIDTAMQRAGA 484 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFL---SYPDFSIQNLFSICPDARKFSSLVIERLQ 537 L I+ DG+ RT + L + PD + I P S V ++ Sbjct: 485 ESFLPDALQQAGITVSADGRRRTLLDVLATAATPD----AIARIAPWFAALPSRVSRHVE 540 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 E+ Y+ Y RQ E ++++ E + +P D DY + LS+E++E+L+ +P + A + Sbjct: 541 TEARYSGYLVRQAREIRQLEAETRITLPADLDYRRIGGLSSEMQERLAAARPASFSAAQR 600 Query: 598 IEGMTPAALNLLLIYIKK 615 + G+TP+AL LL ++++ Sbjct: 601 VPGITPSALMALLSHVRQ 618 >gi|54295714|ref|YP_128129.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Legionella pneumophila str. Lens] gi|81170553|sp|Q5WSS4|MNMG_LEGPL RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|53755546|emb|CAH17045.1| hypothetical protein lpl2802 [Legionella pneumophila str. Lens] Length = 624 Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust. Identities = 305/617 (49%), Positives = 405/617 (65%), Gaps = 9/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAG EAA AA+LG T L+TH +G MSCNPAIGG+GKGHLV+EIDAL Sbjct: 7 YDVIVVGGGHAGTEAALAAARLGVKTLLLTHNIDLLGQMSCNPAIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DG M + AD AGIQFR+LN KGPAVR R QADR LYR A++ ++ SQ NL + Q V Sbjct: 67 DGAMAKAADQAGIQFRILNASKGPAVRATRAQADRVLYRKAIRTQLQSQANLTIFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E +++ +V Q ++ VVLT GTFL G IH+G + GR GD PS +L S Sbjct: 127 DLKIEGGLVTGVVTQMGLTLKARAVVLTVGTFLGGKIHVGMNQYAGGRAGDPPSIALSKS 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQIECGITR 244 D GRLKTGTP R+D +TI + + +Q D + FS++ T +Q+ C IT Sbjct: 187 LRDLDLPVGRLKTGTPPRIDRRTIDFSQMVEQPGDTPVPVFSYLGTASDHPQQVSCHITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T TH II N+ S +Y+G I+ GPRYCPSIEDKIVRF ++ HQIF+EPEGL T+ Sbjct: 247 TTEATHDIIRNNLDKSPMYAGVIEGVGPRYCPSIEDKIVRFADKTSHQIFVEPEGLTTEE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP E+Q QF+RTI G E +I RPGYAIEYDY +P+ L L+TK I LF Sbjct: 307 IYPNGISTSLPFEVQVQFVRTIKGFENAHITRPGYAIEYDYFDPRGLTSFLQTKAIPNLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQG++AG+N+A + D C R ++YIGV+IDDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGIIAGMNAALQIKGQDLWCPRRDEAYIGVLIDDLITCGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK-SLVL 483 RMFTSRAEYR+ LR DNAD RLT G +LG +G+ R F+K + ++LL S V Sbjct: 427 RMFTSRAEYRLLLREDNADLRLTEKGRQLGLVGDERWDSFSKKREAIESTQALLHNSWVR 486 Query: 484 TSKN-LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL---VIERLQIE 539 N L ++ R A EFL P+ + ++L + D L + E+++I+ Sbjct: 487 VHHNDLFKEALLNPMQHDCRAA-EFLKRPEINYRHLLMM--DDLNLPELPQEITEQIEIQ 543 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + YA Y RQ E ++++ E ++P+ DY+ + LS+E+ +KL+ +KP +L QA +I Sbjct: 544 NKYAGYIDRQQQEIEKLRKHENTMLPETLDYNDVVGLSSEVIQKLNRIKPTSLAQAGRIS 603 Query: 600 GMTPAALNLLLIYIKKN 616 G+TPAAL+LLL+++KK+ Sbjct: 604 GVTPAALSLLLVHLKKS 620 >gi|162139859|ref|YP_413449.2| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Nitrosospira multiformis ATCC 25196] gi|205375715|sp|Q2Y5B4|MNMG_NITMU RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A Length = 632 Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust. Identities = 300/622 (48%), Positives = 404/622 (64%), Gaps = 7/622 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G T L++H T+G MSCNP+IGG+GKGHLV+EIDAL Sbjct: 7 FDVIVIGGGHAGTEAALAAARIGQKTLLLSHNIETLGQMSCNPSIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+M AD AGIQFR+LN +KGPAVR R QADR LYR A+++ + SQ NL + Q V Sbjct: 67 GGVMAEAADEAGIQFRILNSRKGPAVRATRAQADRVLYRQAIRQRLESQPNLWLFQQGVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E ++ +V Q V+LT GTFL G+ H+G AGR GD PSNSL Sbjct: 127 DLVLEGERVAGVVTQLGIRFNARAVILTAGTFLAGLAHVGSANFQAGRAGDLPSNSLAGR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+DG+TI + Q D + FSFM + ++ +Q+ C IT Sbjct: 187 LRELKLPVGRLKTGTPPRIDGRTIDYSAVAAQPGDAPVPVFSFMGNAASHPKQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH II + S ++SG I+ GPRYCPSIEDK+VRF + HQIFLEPEGL T Sbjct: 247 TNSQTHDIIRSGLDRSPLFSGAIEGIGPRYCPSIEDKVVRFSAKESHQIFLEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LP ++Q + +R+I GLE +I RPGYAIEYDY +P+ L +LET+ I GLF Sbjct: 307 VYPNGISTSLPFDMQVKLVRSIKGLENAHITRPGYAIEYDYFDPRALKSSLETRMIEGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AGIN+A K+ + C R ++Y+GV++DDL ++GV EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGINAALKTQDREPWCPRRDEAYLGVLVDDLITRGVTEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT +G +LG + + R F ++ ++ LK+ L+ Sbjct: 427 RMFTSRAEYRLQLREDNADLRLTEVGRRLGVVNDARWVAFNIKLEAIAQEQNRLKTTWLS 486 Query: 485 SKNLSSTSISFKQDGKT----RTAYEFLSYPDFSIQNLFSICPDARKFSSL-VIERLQIE 539 K+LS T + + GK + ++ L P+ S L ++ L E+++I+ Sbjct: 487 PKSLSETD-ALRVIGKNIEHECSLHDLLRRPNVSYAELMTLPGAGEPVVDLAAAEQVEIQ 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + Y Y RQ E + E +P+D DY ++ LSNE+++KL+ KP QAS+I Sbjct: 546 AKYQGYIERQKDEVARNAYYEDIRLPQDLDYKTVRGLSNEVQQKLNQFKPETAGQASRIS 605 Query: 600 GMTPAALNLLLIYIKKNTVKLN 621 G+TPAA++LLL+++K+ N Sbjct: 606 GITPAAISLLLVHVKRGFSSAN 627 >gi|82411948|gb|ABB76057.1| glucose inhibited division protein A [Nitrosospira multiformis ATCC 25196] Length = 647 Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust. Identities = 300/622 (48%), Positives = 404/622 (64%), Gaps = 7/622 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G T L++H T+G MSCNP+IGG+GKGHLV+EIDAL Sbjct: 22 FDVIVIGGGHAGTEAALAAARIGQKTLLLSHNIETLGQMSCNPSIGGIGKGHLVKEIDAL 81 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+M AD AGIQFR+LN +KGPAVR R QADR LYR A+++ + SQ NL + Q V Sbjct: 82 GGVMAEAADEAGIQFRILNSRKGPAVRATRAQADRVLYRQAIRQRLESQPNLWLFQQGVD 141 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E ++ +V Q V+LT GTFL G+ H+G AGR GD PSNSL Sbjct: 142 DLVLEGERVAGVVTQLGIRFNARAVILTAGTFLAGLAHVGSANFQAGRAGDLPSNSLAGR 201 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+DG+TI + Q D + FSFM + ++ +Q+ C IT Sbjct: 202 LRELKLPVGRLKTGTPPRIDGRTIDYSAVAAQPGDAPVPVFSFMGNAASHPKQVSCWITH 261 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH II + S ++SG I+ GPRYCPSIEDK+VRF + HQIFLEPEGL T Sbjct: 262 TNSQTHDIIRSGLDRSPLFSGAIEGIGPRYCPSIEDKVVRFSAKESHQIFLEPEGLTTHE 321 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LP ++Q + +R+I GLE +I RPGYAIEYDY +P+ L +LET+ I GLF Sbjct: 322 VYPNGISTSLPFDMQVKLVRSIKGLENAHITRPGYAIEYDYFDPRALKSSLETRMIEGLF 381 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AGIN+A K+ + C R ++Y+GV++DDL ++GV EPY Sbjct: 382 FAGQINGTTGYEEAAAQGLLAGINAALKTQDREPWCPRRDEAYLGVLVDDLITRGVTEPY 441 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT +G +LG + + R F ++ ++ LK+ L+ Sbjct: 442 RMFTSRAEYRLQLREDNADLRLTEVGRRLGVVNDARWVAFNIKLEAIAQEQNRLKTTWLS 501 Query: 485 SKNLSSTSISFKQDGKT----RTAYEFLSYPDFSIQNLFSICPDARKFSSL-VIERLQIE 539 K+LS T + + GK + ++ L P+ S L ++ L E+++I+ Sbjct: 502 PKSLSETD-ALRVIGKNIEHECSLHDLLRRPNVSYAELMTLPGAGEPVVDLAAAEQVEIQ 560 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + Y Y RQ E + E +P+D DY ++ LSNE+++KL+ KP QAS+I Sbjct: 561 AKYQGYIERQKDEVARNAYYEDIRLPQDLDYKTVRGLSNEVQQKLNQFKPETAGQASRIS 620 Query: 600 GMTPAALNLLLIYIKKNTVKLN 621 G+TPAA++LLL+++K+ N Sbjct: 621 GITPAAISLLLVHVKRGFSSAN 642 >gi|89256126|ref|YP_513488.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Francisella tularensis subsp. holarctica LVS] gi|115314600|ref|YP_763323.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Francisella tularensis subsp. holarctica OSU18] gi|156502147|ref|YP_001428212.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Francisella tularensis subsp. holarctica FTNF002-00] gi|167009829|ref|ZP_02274760.1| glucose-inhibited division protein A [Francisella tularensis subsp. holarctica FSC200] gi|187931542|ref|YP_001891526.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Francisella tularensis subsp. mediasiatica FSC147] gi|254367451|ref|ZP_04983477.1| glucose inhibited division protein A [Francisella tularensis subsp. holarctica 257] gi|122325376|sp|Q0BMJ8|MNMG_FRATO RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|122500919|sp|Q2A464|MNMG_FRATH RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|166222933|sp|A7NBA3|MNMG_FRATF RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|89143957|emb|CAJ79178.1| glucose inhibited division protein A [Francisella tularensis subsp. holarctica LVS] gi|115129499|gb|ABI82686.1| glucose inhibited division protein A [Francisella tularensis subsp. holarctica OSU18] gi|134253267|gb|EBA52361.1| glucose inhibited division protein A [Francisella tularensis subsp. holarctica 257] gi|156252750|gb|ABU61256.1| glucose-inhibited division protein A [Francisella tularensis subsp. holarctica FTNF002-00] gi|187712451|gb|ACD30748.1| glucose inhibited division protein [Francisella tularensis subsp. mediasiatica FSC147] Length = 627 Score = 580 bits (1494), Expect = e-163, Method: Compositional matrix adjust. Identities = 309/619 (49%), Positives = 406/619 (65%), Gaps = 12/619 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAG EAA+ +A++GA T L+TH TIG MSCNPAIGG+GKGHLV+EIDA+ Sbjct: 7 YDVIVVGGGHAGVEAASASARIGAKTLLLTHNIDTIGQMSCNPAIGGIGKGHLVKEIDAM 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+M + D AGIQFR+LN +KGPAVR R QADR LY+ A+ I +QENLD+ Q V Sbjct: 67 GGVMAKAIDMAGIQFRILNSRKGPAVRATRAQADRVLYKKAINSLINNQENLDIFQDSVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E N + + + R VVLT GTFL G IHIGK+ GR GD PSN+L Sbjct: 127 DLVVENNTVCGAITKTGITFRAKKVVLTVGTFLGGKIHIGKVSNAGGRAGDQPSNALAAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITN-RQIECGIT 243 F RLKTGTP R+D +++ + E Q D FSF + KI + RQI C IT Sbjct: 187 LRSLPFRVDRLKTGTPPRIDRRSVDFSVMEVQHGDNPTPYFSFFSKGKIEHPRQIPCYIT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN ETH+II +N+ SA+YSG I+ GPRYCPSIEDK+VRF ++ HQIF+EPEGLN+ Sbjct: 247 YTNNETHKIITDNLDKSAMYSGLIEGIGPRYCPSIEDKVVRFADKERHQIFVEPEGLNSI 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNG+ST+LP E+Q +IR+I G EK I+RPGYAIEYD+ +P++L PTLETK I L Sbjct: 307 ELYPNGLSTSLPFEVQCNYIRSIKGFEKAFIMRPGYAIEYDFFDPRDLKPTLETKHIKNL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGTTGYEEA AQGLVA IN+A + +R DSYIGV+IDDL +KG EP Sbjct: 367 YFAGQINGTTGYEEAGAQGLVASINAAISIDSDKSWYPTRADSYIGVLIDDLITKGTKEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFL---RSLLKS 480 YRMFTSRAEYR+ LR DNAD RL+ +LG + + Q+ F I + N + +++K+ Sbjct: 427 YRMFTSRAEYRLILREDNADLRLSDKACELGLLSKEDQQHF---ISKKNAIIENIAMMKN 483 Query: 481 LVLTSKNLSSTSISFKQDGK-TR--TAYEFLSYPDFSIQNLFSICP-DARKFSSLVIERL 536 + + + + D K TR T ++ L P+ L I + VIE++ Sbjct: 484 TWIGPQTQKARDLEKFLDKKMTRESTLFDLLKRPEIDYSKLQQISELNLNLQDDAVIEQI 543 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I + Y+ Y RQ + ++ E++ IP DF+YS + LSNE+ +KL+ KP L +AS Sbjct: 544 EISAKYSGYIERQNKDIEKTATLEQKAIPTDFNYSQVKGLSNEVLQKLTEQKPTTLGEAS 603 Query: 597 KIEGMTPAALNLLLIYIKK 615 +I G+TPAA++LL IY+KK Sbjct: 604 RIPGITPAAISLLTIYMKK 622 >gi|260913576|ref|ZP_05920053.1| glucose-inhibited division protein A [Pasteurella dagmatis ATCC 43325] gi|260632352|gb|EEX50526.1| glucose-inhibited division protein A [Pasteurella dagmatis ATCC 43325] Length = 629 Score = 580 bits (1494), Expect = e-163, Method: Compositional matrix adjust. Identities = 300/622 (48%), Positives = 399/622 (64%), Gaps = 15/622 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIGGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLVREIDA Sbjct: 6 NYDVIVIGGGHAGTEAALAPARMGLKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVREIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 + GLM AD AGIQFR LN KGPAVR R QADR LYR A++ + +Q+NLD+ Q EV Sbjct: 66 MGGLMATAADQAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRIALENQDNLDIFQQEV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + +S + + R V+LT GTFL G IHIG GR GD S L + Sbjct: 126 TDIILEGDRVSGVETKMGLKFRAKAVILTAGTFLSGKIHIGLENYTGGRAGDPASVMLAD 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGIT 243 + RLKTGTP R+D +TI + KQ DE+L FSFM + QI C IT Sbjct: 186 RLRDLNLRVDRLKTGTPPRIDARTIDFSILAKQHGDEKLPVFSFMGSVDQHPCQIPCFIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ERN HQI+LEPEGL ++ Sbjct: 246 HTNEQTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFSERNSHQIYLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q + + ++ G+EK I++PGYAIEYDY +P++L PTLETK ISGL Sbjct: 306 EIYPNGISTSLPFDVQMKIVNSMKGMEKARIVKPGYAIEYDYFDPRDLKPTLETKSISGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ + D R +Y+GV++DDL + G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGINAGLFVQEKDAWFPRRDQAYVGVLVDDLCTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+FTSRAEYR+ LR DNAD+RLTPI +LG I E R RF + ++ R L+ + L Sbjct: 426 YRVFTSRAEYRLLLREDNADSRLTPIAQELGLITEERWARFNQKMENIELERQRLRQIWL 485 Query: 484 TSKN--------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VIE 534 ++ + S+ + + +G+ + L P+ + Q L ++ P +E Sbjct: 486 HPRSEYLEEANQVLSSPLVREANGE-----DLLRRPEINYQILTTLTPFQPAMKDKEAVE 540 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I Y Y Q E + K E IP +FDYS + LSNE++ KL +P ++ Q Sbjct: 541 QVEIAIKYQGYIEHQQEEIERQKRHENTTIPANFDYSVVSGLSNEVRAKLEQHRPVSIGQ 600 Query: 595 ASKIEGMTPAALNLLLIYIKKN 616 AS+I G+TPAA+++LL+ +KK Sbjct: 601 ASRISGITPAAISILLVNLKKQ 622 >gi|253702731|ref|YP_003023920.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Geobacter sp. M21] gi|251777581|gb|ACT20162.1| glucose inhibited division protein A [Geobacter sp. M21] Length = 624 Score = 579 bits (1493), Expect = e-163, Method: Compositional matrix adjust. Identities = 303/618 (49%), Positives = 399/618 (64%), Gaps = 9/618 (1%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 +++YDVIV+G GHAGCEAA AA++G ST ++T I MSCNPAIGGL KGHLV+EI Sbjct: 5 DKTYDVIVVGAGHAGCEAALAAARMGRSTLMLTINLDAIALMSCNPAIGGLAKGHLVKEI 64 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G MGR DA GIQFRVLN KKGPAVR R QAD++LYRL M+ + Q+NLD+ Q Sbjct: 65 DALGGEMGRNIDATGIQFRVLNTKKGPAVRASRAQADKQLYRLRMKHVMELQDNLDLKQV 124 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 EV E ++ + + TVVLTTGTF+RG+IHIG + P GR GD PS L Sbjct: 125 EVTNLYLEGGSVAGVDTKGGVRYLGRTVVLTTGTFMRGLIHIGLVNYPGGRAGDLPSIGL 184 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGI 242 + F+ GRLKTGTPARLDG+TI +D+ E Q DE IPFSF T++I Q+ C + Sbjct: 185 SDGLKDVGFEVGRLKTGTPARLDGRTIDFDRLEAQHGDENPIPFSFSTERIEQPQVPCHV 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 TN ++H II + S +Y+G I+ GPRYCPSIEDK+VRF E++ HQ F+EPEG T Sbjct: 245 AYTNPKSHDIIRSGLDRSPLYAGIIEGIGPRYCPSIEDKVVRFPEKDRHQTFIEPEGRET 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 VYP+G+ST+LP +IQ F R+I GLE+V I+RP YAIEYDY+NP +L +LETK + Sbjct: 305 VEVYPSGMSTSLPIDIQWAFYRSIEGLERVEIMRPAYAIEYDYVNPIQLHASLETKLVRN 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQINGT+GYEEAAAQGL+AGIN+A K + R+++YIGVMIDDL + G E Sbjct: 365 LYHAGQINGTSGYEEAAAQGLMAGINAALKVQGRQPLVLGRSEAYIGVMIDDLVTLGTKE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RL G ++G + E + ++ + + + L L Sbjct: 425 PYRMFTSRAEYRLLLREDNADLRLREKGHEIGLVPE---SLYHTFLAKKELIEAELDRLS 481 Query: 483 LTSKNLSSTSISFKQDG-----KTRTAYE-FLSYPDFSIQNLFSICPDARKFSSLVIERL 536 S+ Q+ + +YE L PDF+ +L I P+ + V E+L Sbjct: 482 RERLTPSAAGEELLQEWDLVGIQNAVSYEQLLRRPDFTCSDLARIYPEIMELPETVREQL 541 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y Y RQ+ + E IP + DY ++P+LS E++EKL +P L QAS Sbjct: 542 EIQIKYKGYIERQLEQVARAARLESTTIPAEMDYGTVPSLSAEVREKLVRFRPDTLGQAS 601 Query: 597 KIEGMTPAALNLLLIYIK 614 +I G+TPA + +L I +K Sbjct: 602 RIPGVTPAGITILSIALK 619 >gi|42520820|ref|NP_966735.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Wolbachia endosymbiont of Drosophila melanogaster] gi|81170589|sp|Q73GE7|MNMG_WOLPM RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|42410560|gb|AAS14669.1| glucose-inhibited division protein A [Wolbachia endosymbiont of Drosophila melanogaster] Length = 644 Score = 579 bits (1493), Expect = e-163, Method: Compositional matrix adjust. Identities = 302/614 (49%), Positives = 391/614 (63%), Gaps = 25/614 (4%) Query: 30 STALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGP 89 +T LITHK STIG MSCNPAIGG+ KG +VRE+DALDG+MGR D A I +LN +G Sbjct: 28 NTLLITHKISTIGEMSCNPAIGGVAKGVVVREVDALDGIMGRAIDQASIHSVILNSSRGA 87 Query: 90 AVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKN-----IISSIVMQDNSM 144 AV GPR QADR+LY+ A+Q IL+ NL V + V F E N I +++ Sbjct: 88 AVWGPRAQADRKLYKQAIQEIILNYNNLTVKEESVDDFLIESNNNGELCIKAVITSSGEH 147 Query: 145 IRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARL 204 I S VVLTTGTFLRGVIHIG+ P+GRMGD P+ L N+ K++F GRL+TGTP RL Sbjct: 148 ILTSKVVLTTGTFLRGVIHIGEQVTPSGRMGDKPAVELANTLKKYNFKLGRLRTGTPPRL 207 Query: 205 DGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAI-Y 263 D TI W ++Q D +PFS++T+KI Q+ C IT TN TH+II EN+ SA Y Sbjct: 208 DRGTINWSILQEQVGDNPPVPFSYLTEKINQPQVSCFITHTNENTHKIIRENLHRSASSY 267 Query: 264 SGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFI 323 DI PRYCPSIE K+ +F E++ HQIFLEPEGL+ D VYPNGIS +LP E+Q + I Sbjct: 268 LDDI--IAPRYCPSIEVKVNKFAEKSSHQIFLEPEGLDDDTVYPNGISNSLPIEVQREMI 325 Query: 324 RTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGL 383 ++I GLE I+RPGYA+EYDYI+P+ELF TLETKKI GL+ AGQINGTTGYEEAA QG+ Sbjct: 326 KSIKGLENAEILRPGYAVEYDYIDPRELFHTLETKKIKGLYFAGQINGTTGYEEAAGQGI 385 Query: 384 VAGINSA-RKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNA 442 +AGIN+A S K + RTDSYIGVMIDDL KGV+EPYR+FTSRAEYR+++R DNA Sbjct: 386 IAGINAALSASEKKESFVLHRTDSYIGVMIDDLVIKGVIEPYRLFTSRAEYRLAIRSDNA 445 Query: 443 DNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTR 502 D RLT G + + R ++ L L SL +T + L S I DG + Sbjct: 446 DRRLTQKGYDISLVSHERYSVLQNKLESIKQLEEKLGSLTITPEQLRSYGIKISYDGIRK 505 Query: 503 TAYEFLSYPDFSIQNLFSICPDARKFSSL----------------VIERLQIESSYAAYT 546 TA + LSYP+ L I P+ + + E ++IE+ Y Y Sbjct: 506 TALDLLSYPNIDWNKLQEIWPELSSVTRWNGKMGHTKADNRAKNEICEAVEIEAKYKPYL 565 Query: 547 GRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAAL 606 RQ + K ++ E IP +F+YS + LS+E+ EKL +KP + A +I+G+TPAA+ Sbjct: 566 IRQEADMKFLREEINTQIPINFNYSQVKGLSSEVIEKLQTIKPATIGIAKQIQGITPAAI 625 Query: 607 NLLLIYIKKNTVKL 620 +L+Y++ K+ Sbjct: 626 VSILVYLRNRKTKV 639 >gi|134302185|ref|YP_001122154.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Francisella tularensis subsp. tularensis WY96-3418] gi|166222935|sp|A4IYN2|MNMG_FRATW RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|134049962|gb|ABO47033.1| glucose-inhibited division protein A [Francisella tularensis subsp. tularensis WY96-3418] Length = 627 Score = 579 bits (1492), Expect = e-163, Method: Compositional matrix adjust. Identities = 309/619 (49%), Positives = 406/619 (65%), Gaps = 12/619 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAG EAA+ +A++GA T L+TH TIG MSCNPAIGG+GKGHLV+EIDA+ Sbjct: 7 YDVIVVGGGHAGVEAASASARIGAKTLLLTHNIDTIGQMSCNPAIGGIGKGHLVKEIDAM 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+M + D AGIQFR+LN +KGPAVR R QADR LY+ A+ I +QENLD+ Q V Sbjct: 67 GGVMAKAIDMAGIQFRILNSRKGPAVRATRAQADRLLYKKAINSLINNQENLDIFQDSVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E N + + + R VVLT GTFL G IHIGK+ GR GD PSN+L Sbjct: 127 DLVVENNTVCGAITKTGITFRAKKVVLTVGTFLGGKIHIGKVSNAGGRAGDQPSNALAAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITN-RQIECGIT 243 F RLKTGTP R+D +++ + E Q D FSF + KI + RQI C IT Sbjct: 187 LRSLPFRVDRLKTGTPPRIDRRSVDFSVMEVQHGDNPTPYFSFFSKGKIEHPRQIPCYIT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN ETH+II +N+ SA+YSG I+ GPRYCPSIEDK+VRF ++ HQIF+EPEGLN+ Sbjct: 247 YTNNETHKIITDNLDKSAMYSGLIEGIGPRYCPSIEDKVVRFADKERHQIFVEPEGLNSI 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNG+ST+LP E+Q +IR+I G EK I+RPGYAIEYD+ +P++L PTLETK I L Sbjct: 307 ELYPNGLSTSLPFEVQCNYIRSIKGFEKAFIMRPGYAIEYDFFDPRDLKPTLETKHIKNL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGTTGYEEA AQGLVA IN+A + +R DSYIGV+IDDL +KG EP Sbjct: 367 YFAGQINGTTGYEEAGAQGLVASINAAISIDSDKSWYPTRADSYIGVLIDDLITKGTKEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFL---RSLLKS 480 YRMFTSRAEYR+ LR DNAD RL+ +LG + + Q+ F I + N + +++K+ Sbjct: 427 YRMFTSRAEYRLILREDNADLRLSDKACELGLLSKEDQQHF---ISKKNAIIENIAMMKN 483 Query: 481 LVLTSKNLSSTSISFKQDGK-TR--TAYEFLSYPDFSIQNLFSICP-DARKFSSLVIERL 536 + + + + D K TR T ++ L P+ L I + VIE++ Sbjct: 484 TWIGPQTQKARDLEKFLDKKMTRESTLFDLLKRPEIDYSKLQQISELNLNLQDDAVIEQI 543 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I + Y+ Y RQ + ++ E++ IP DF+YS + LSNE+ +KL+ KP L +AS Sbjct: 544 EISAKYSGYIERQNKDIEKTATLEQKAIPTDFNYSQVKGLSNEVLQKLTEQKPTTLGEAS 603 Query: 597 KIEGMTPAALNLLLIYIKK 615 +I G+TPAA++LL IY+KK Sbjct: 604 RIPGITPAAISLLTIYMKK 622 >gi|56708268|ref|YP_170164.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Francisella tularensis subsp. tularensis SCHU S4] gi|110670739|ref|YP_667296.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Francisella tularensis subsp. tularensis FSC198] gi|224457388|ref|ZP_03665861.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Francisella tularensis subsp. tularensis MA00-2987] gi|254370751|ref|ZP_04986756.1| glucose inhibited division protein A [Francisella tularensis subsp. tularensis FSC033] gi|254875088|ref|ZP_05247798.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Francisella tularensis subsp. tularensis MA00-2987] gi|81170542|sp|Q5NFM8|MNMG_FRATT RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|123359437|sp|Q14H30|MNMG_FRAT1 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|56604760|emb|CAG45838.1| glucose inhibited division protein A [Francisella tularensis subsp. tularensis SCHU S4] gi|110321072|emb|CAL09221.1| glucose inhibited division protein A [Francisella tularensis subsp. tularensis FSC198] gi|151568994|gb|EDN34648.1| glucose inhibited division protein A [Francisella tularensis subsp. tularensis FSC033] gi|254841087|gb|EET19523.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Francisella tularensis subsp. tularensis MA00-2987] gi|282159495|gb|ADA78886.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Francisella tularensis subsp. tularensis NE061598] Length = 627 Score = 579 bits (1492), Expect = e-163, Method: Compositional matrix adjust. Identities = 309/619 (49%), Positives = 406/619 (65%), Gaps = 12/619 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAG EAA+ +A++GA T L+TH TIG MSCNPAIGG+GKGHLV+EIDA+ Sbjct: 7 YDVIVVGGGHAGVEAASASARIGAKTLLLTHNIDTIGQMSCNPAIGGIGKGHLVKEIDAM 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+M + D AGIQFR+LN +KGPAVR R QADR LY+ A+ I +QENLD+ Q V Sbjct: 67 GGVMAKAIDMAGIQFRILNSRKGPAVRATRAQADRLLYKKAINSLINNQENLDIFQDSVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E N + + + R VVLT GTFL G IHIGK+ GR GD PSN+L Sbjct: 127 DLVVENNTVCGAITKTGITFRAKKVVLTVGTFLGGKIHIGKVSNAGGRAGDQPSNALAAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITN-RQIECGIT 243 F RLKTGTP R+D +++ + E Q D FSF + KI + RQI C IT Sbjct: 187 LRSLPFRVDRLKTGTPPRIDRRSVDFSVMEVQHGDNPTPYFSFFSKGKIEHPRQIPCYIT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN ETH+II +N+ SA+YSG I+ GPRYCPSIEDK+VRF ++ HQIF+EPEGLN+ Sbjct: 247 YTNNETHKIITDNLDKSAMYSGLIEGIGPRYCPSIEDKVVRFADKERHQIFVEPEGLNSI 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNG+ST+LP E+Q +IR+I G EK I+RPGYAIEYD+ +P++L PTLETK I L Sbjct: 307 ELYPNGLSTSLPFEVQCNYIRSIKGFEKAFIMRPGYAIEYDFFDPRDLKPTLETKHIKNL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGTTGYEEA AQGLVA IN+A + +R DSYIGV+IDDL +KG EP Sbjct: 367 YFAGQINGTTGYEEAGAQGLVASINAAISIDSDKSWYPTRADSYIGVLIDDLITKGTKEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFL---RSLLKS 480 YRMFTSRAEYR+ LR DNAD RL+ +LG + + Q+ F I + N + +++K+ Sbjct: 427 YRMFTSRAEYRLILREDNADLRLSNKACELGLLSKEDQQHF---ISKKNAIIENIAMMKN 483 Query: 481 LVLTSKNLSSTSISFKQDGK-TR--TAYEFLSYPDFSIQNLFSICP-DARKFSSLVIERL 536 + + + + D K TR T ++ L P+ L I + VIE++ Sbjct: 484 TWIGPQTQKARDLEKFLDKKMTRESTLFDLLKRPEIDYSKLQQISELNLNLQDDAVIEQI 543 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I + Y+ Y RQ + ++ E++ IP DF+YS + LSNE+ +KL+ KP L +AS Sbjct: 544 EISAKYSGYIERQNKDIEKTATFEQKAIPTDFNYSQVKGLSNEVLQKLTEQKPTTLGEAS 603 Query: 597 KIEGMTPAALNLLLIYIKK 615 +I G+TPAA++LL IY+KK Sbjct: 604 RIPGITPAAISLLTIYMKK 622 >gi|126667597|ref|ZP_01738566.1| glucose-inhibited division protein A [Marinobacter sp. ELB17] gi|126627866|gb|EAZ98494.1| glucose-inhibited division protein A [Marinobacter sp. ELB17] Length = 628 Score = 578 bits (1491), Expect = e-163, Method: Compositional matrix adjust. Identities = 296/615 (48%), Positives = 406/615 (66%), Gaps = 7/615 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGH+G EAA AA++G+ T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FDVIVIGGGHSGTEAALAAARMGSQTLLLTHNIETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREIL-SQENLDVIQGEV 124 G M R D AGIQFRVLN +KGPAVR R Q DR LY+ A+ REIL +Q NL + Q Sbjct: 67 GGAMARATDRAGIQFRVLNGRKGPAVRATRAQTDRILYKAAI-REILENQPNLTLFQQSA 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ +V Q TVVLTTGTFL G+IHIG GR GD+P+N+L Sbjct: 126 DDLIVENERVTGVVTQTGIRFLGKTVVLTTGTFLGGIIHIGMKNHAGGRAGDAPANALAQ 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 + F+ GRLKTGTP R+D +++ + ++Q+ D+ SFM + + RQ+ C IT Sbjct: 186 RLRELPFNVGRLKTGTPPRIDARSVDFSVMQQQWGDDPAPVMSFMGSRDEHPRQVCCYIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 RT ETH II S +++G+I GPRYCPS+EDK+ RF +++ HQIF+EPEGL T Sbjct: 246 RTTEETHDIIRSGFDRSPMFTGNIGGVGPRYCPSLEDKVSRFADKSSHQIFVEPEGLTTH 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP +IQ + +++IPG EK +I+RPGYAIEYDY+NP++L TLETK I GL Sbjct: 306 ELYPNGISTSLPFDIQVRAVQSIPGFEKAHIMRPGYAIEYDYLNPQDLRHTLETKFIQGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGTTGYEEAAAQGL+AGIN+AR++ + D R ++YIGV++DDL + G EP Sbjct: 366 YFAGQINGTTGYEEAAAQGLLAGINAARQAQEKDAWYPRRDEAYIGVLVDDLITMGTSEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT G +LG + + R +F + RS L+ + Sbjct: 426 YRMFTSRAEYRLILREDNADLRLTDSGRELGLVDDERWSKFNAKREAIGTERSRLEGTRV 485 Query: 484 TSKNLSSTSIS--FKQD-GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + + KQ G+ T E L P+ ++ I + R ++V ++++IE Sbjct: 486 HPNTAAGERANQYLKQPLGRDHTLAELLRRPEIVYAHIADIA-EYRADDAVVADQVEIEI 544 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E + ++ E +P D DY + LSNE+K+KL +++P + QAS+++G Sbjct: 545 KYEGYISRQADEIERLRKNENTALPVDLDYGIIGGLSNEIKQKLGVVRPETVAQASRVQG 604 Query: 601 MTPAALNLLLIYIKK 615 +TPAA++ +L+++KK Sbjct: 605 VTPAAISQILVHMKK 619 >gi|162147023|ref|YP_001601484.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Gluconacetobacter diazotrophicus PAl 5] gi|205831515|sp|A9HE13|MNMG_GLUDA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|161785600|emb|CAP55171.1| putative tRNA uridine 5-carboxymethylaminomethyl modification enzyme gid (Glucose-inhibited division protein A) [Gluconacetobacter diazotrophicus PAl 5] Length = 620 Score = 578 bits (1491), Expect = e-163, Method: Compositional matrix adjust. Identities = 309/618 (50%), Positives = 396/618 (64%), Gaps = 12/618 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAGCEAAA AA+ GA T L+TH+ TIG+MSCNPAIGG+GKGHLVREIDAL Sbjct: 5 YDVIVIGGGHAGCEAAAAAARCGARTLLLTHRRDTIGAMSCNPAIGGIGKGHLVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGLM R AD AGI F++LN KGPAV GPR QADR LYR A+Q + NLD+ +G Sbjct: 65 DGLMARAADRAGIHFKLLNRSKGPAVHGPRAQADRSLYRRAIQDLLAETANLDIAEGAAG 124 Query: 126 GFNTE-KNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + + +V +D R VVLT GTFLRGVIHIG PAGR+G+ P+++L Sbjct: 125 DLIVDDAGQAAGVVCEDGRQFRAGAVVLTAGTFLRGVIHIGHDSHPAGRVGEPPAHALGE 184 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 GRLKTGTPARLD +I WD + D PFS +T I N Q+ C IT Sbjct: 185 RLQALGLPMGRLKTGTPARLDRTSIDWDSLAEDRGDAVPEPFSRLTQAIDNPQLSCRITA 244 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL---- 300 T TH +I E++ SA+Y G I GPRYCPSIEDK+VRF ER+ HQIFLEPE L Sbjct: 245 TTPRTHALIREHLHLSAVYGGAIAGRGPRYCPSIEDKVVRFAERDSHQIFLEPEALPGNA 304 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 D+VYPNGIST+LP +IQ Q I +IPGLE+ I+RPGYA+EYDY++P+ L PTLE + Sbjct: 305 GGDLVYPNGISTSLPADIQEQLIHSIPGLERCRIVRPGYAVEYDYVDPRALAPTLELTAL 364 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 LFLAGQINGTTGYEEA AQGL+AG+N+AR++ + I R +Y+GVMIDDL ++GV Sbjct: 365 PRLFLAGQINGTTGYEEAGAQGLLAGLNAARRAGGGEGIAIDRGAAYLGVMIDDLATQGV 424 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+SLR DNAD RLT G+ GC+G R F + + Sbjct: 425 SEPYRMFTSRAEYRLSLRADNADLRLTGQGIGWGCVGSARAHLFTAERDAIDTAMQRAGA 484 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFL---SYPDFSIQNLFSICPDARKFSSLVIERLQ 537 L I+ DG+ RT + L + PD + I P S V ++ Sbjct: 485 ESFLPDALQQAGITVSADGRRRTLLDVLATAATPD----AIARIAPWFAALPSRVSRHVE 540 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 E+ Y+ Y RQ E ++++ E + +P D DY + LS+E++E+L+ +P + A + Sbjct: 541 TEARYSGYLVRQAREIRQLEAETRITLPADLDYRRIGGLSSEMQERLAAARPASFSAAQR 600 Query: 598 IEGMTPAALNLLLIYIKK 615 + G+TP+AL LL ++++ Sbjct: 601 VPGITPSALMALLSHVRQ 618 >gi|332286173|ref|YP_004418084.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pusillimonas sp. T7-7] gi|330430126|gb|AEC21460.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pusillimonas sp. T7-7] Length = 638 Score = 578 bits (1491), Expect = e-163, Method: Compositional matrix adjust. Identities = 300/624 (48%), Positives = 410/624 (65%), Gaps = 14/624 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAG EAA AA+ GAST L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 YDVIVVGGGHAGTEAALAAARTGASTLLLTHNMETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D AGIQFR+LN KGPAVR R QADR LYR+A++ + +Q NL + Q V Sbjct: 67 GGAMAYATDKAGIQFRILNSSKGPAVRATRAQADRSLYRMAIRTTLQNQPNLTIFQQSVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + ++ V Q R TVVLT GTFL G+IH+G AGR GD P+ +L Sbjct: 127 DLLLEGDRVAGAVTQIGLKFRGRTVVLTAGTFLNGLIHVGLDHYSAGRAGDPPAITLGQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFM-TDKITNRQIECGIT 243 + GRLKTGTP R+D ++I + KTE Q D IP FS++ + + Q+ C IT Sbjct: 187 LKELKLPQGRLKTGTPPRIDARSIDFSKTEVQAGDRDPIPVFSYLGSASMHPEQLPCWIT 246 Query: 244 RTNLETHRIIMENIKHSAIYS--GDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 TN TH II + S +YS G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL Sbjct: 247 HTNERTHDIIRSGLDRSPMYSDSGTIEGIGPRYCPSIEDKIHRFADKPSHQIFLEPEGLT 306 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T +YPNG+ST+LP +IQ +RT+PGLE I+RPGYAIEYDY +P+EL TLET+ I Sbjct: 307 TQEIYPNGVSTSLPFDIQLALVRTLPGLENAIIMRPGYAIEYDYFDPRELSSTLETRAIK 366 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQINGTTGYEEAAAQGL+AG+N+AR++ L+ R ++Y+GV++DDL ++GV Sbjct: 367 GLFFAGQINGTTGYEEAAAQGLLAGLNAARQAQGLEGWFPKRNEAYLGVLVDDLITRGVT 426 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+SLR DNAD RLT +G LG + ++R + F+K ++ + LKS Sbjct: 427 EPYRMFTSRAEYRLSLREDNADMRLTEMGRTLGLVDDQRWEAFSKKREDVSRETERLKST 486 Query: 482 VLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-------SSL 531 + K L ++ ++ KQ K + + L P + + L ++ + ++ Sbjct: 487 WINPKTLAHHTAEALLGKQLEKEHSLLDLLKRPQVTYKALMALHKEDGTLVAGPGLEDAV 546 Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 E+++I+ YA Y +Q E + +E + IP D DY ++ +LS E++++L + +P Sbjct: 547 AAEQVEIQIKYAGYVAKQQEEIERQLEQESQAIPPDLDYDAISSLSIEVRQRLKLSRPET 606 Query: 592 LLQASKIEGMTPAALNLLLIYIKK 615 + QAS++ G+TPAA++LLLI++K+ Sbjct: 607 VGQASRVSGITPAAISLLLIHLKR 630 >gi|15603350|ref|NP_246424.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pasteurella multocida subsp. multocida str. Pm70] gi|13431542|sp|P57945|MNMG_PASMU RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|12721869|gb|AAK03569.1| GidA [Pasteurella multocida subsp. multocida str. Pm70] Length = 629 Score = 578 bits (1490), Expect = e-163, Method: Compositional matrix adjust. Identities = 300/623 (48%), Positives = 395/623 (63%), Gaps = 17/623 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIGGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLVREIDA Sbjct: 6 NYDVIVIGGGHAGTEAALAPARMGLKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVREIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 + GLM AD AGIQFR LN KGPAVR R QADR LYR A++ + +QENLD+ Q EV Sbjct: 66 MGGLMATAADQAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRIALENQENLDIFQQEV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 +++ + +V + V+LT GTFL G IHIG GR GD S L + Sbjct: 126 TDIILDQDRVCGVVTKMGLKFHAKAVILTAGTFLSGKIHIGLENYTGGRAGDPASVMLAD 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 + + RLKTGTP R+D +TI + KQ DE+L FSFM + RQI C IT Sbjct: 186 RLRELNLRVDRLKTGTPPRIDARTIDFSVLAKQHGDEKLPVFSFMGSVDQHPRQIPCFIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ERN HQI+LEPEGL ++ Sbjct: 246 HTNEQTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFSERNSHQIYLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q + + ++ G+EK II+PGYAIEYDY +P++L PTLETK I GL Sbjct: 306 EIYPNGISTSLPFDVQMKIVNSMKGMEKARIIKPGYAIEYDYFDPRDLKPTLETKSIRGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAA QGL+AGIN+ + + R +YIGV++DDL + G EP Sbjct: 366 FFAGQINGTTGYEEAAGQGLLAGINAGLFVQEKEAWFPRRDQAYIGVLVDDLCTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+FTSRAEYR+ LR DNAD+RLTPI +LG I E+R RF + ++ R L+ + L Sbjct: 426 YRVFTSRAEYRLLLREDNADSRLTPIAHQLGLIDEKRWARFNQKMENIELERQRLRQIWL 485 Query: 484 ---------TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VI 533 +K L S + + + + L P+ + Q L S+ P + Sbjct: 486 HPRSEYLDEANKVLGSPLV------REASGEDLLRRPEMNYQILTSLTPFQPAMDDQEAV 539 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I Y Y Q E K E IP FDY+ + LSNE++ KL +P ++ Sbjct: 540 EQVEIAIKYQGYIEHQQEEIARQKRHESTAIPAHFDYTVVSGLSNEVRAKLEQHRPVSIG 599 Query: 594 QASKIEGMTPAALNLLLIYIKKN 616 QAS+I G+TPAA+++LL+ +KK Sbjct: 600 QASRISGVTPAAISILLVSLKKQ 622 >gi|258543707|ref|YP_003189140.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Acetobacter pasteurianus IFO 3283-01] gi|256634785|dbj|BAI00761.1| glucose inhibited division protein A GidA [Acetobacter pasteurianus IFO 3283-01] gi|256637841|dbj|BAI03810.1| glucose inhibited division protein A GidA [Acetobacter pasteurianus IFO 3283-03] gi|256640895|dbj|BAI06857.1| glucose inhibited division protein A GidA [Acetobacter pasteurianus IFO 3283-07] gi|256643950|dbj|BAI09905.1| glucose inhibited division protein A GidA [Acetobacter pasteurianus IFO 3283-22] gi|256647005|dbj|BAI12953.1| glucose inhibited division protein A GidA [Acetobacter pasteurianus IFO 3283-26] gi|256650058|dbj|BAI15999.1| glucose inhibited division protein A GidA [Acetobacter pasteurianus IFO 3283-32] gi|256653048|dbj|BAI18982.1| glucose inhibited division protein A GidA [Acetobacter pasteurianus IFO 3283-01-42C] gi|256656102|dbj|BAI22029.1| glucose inhibited division protein A GidA [Acetobacter pasteurianus IFO 3283-12] Length = 626 Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust. Identities = 310/620 (50%), Positives = 408/620 (65%), Gaps = 6/620 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +N++YDVIV+GGGHAGCEAAA AA+ GA T L+TH +T+G+MSCNPAIGG+GKGHLVRE Sbjct: 1 MNKAYDVIVVGGGHAGCEAAAAAARCGAKTLLLTHHKNTVGAMSCNPAIGGIGKGHLVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDALDG+M R AD AGI F++LN KGPAV+GPR QADR LYR A+Q + + E LD+ + Sbjct: 61 IDALDGVMARAADRAGIHFKLLNRSKGPAVQGPRAQADRLLYRQAVQDILANTEGLDIEE 120 Query: 122 GEVAGF-NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 G V ++N ++ + + VVLTTGTFL GVIHIG PAGR+G+ PS Sbjct: 121 GAVTDLICDDQNRVAGVACEGGRQWAAGAVVLTTGTFLDGVIHIGHKSQPAGRIGEQPSV 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 +L + RLKTGTPARL TI W D PFS +T ITN Q+ C Sbjct: 181 ALASRLKNLGLRIARLKTGTPARLKRDTIDWASLAVDRGDVSPEPFSRLTKSITNPQMVC 240 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 GIT T +TH II E++ SA+Y G I GPRYCPSIEDK+VRF E+ GHQIFLEPE L Sbjct: 241 GITATVQKTHDIIREHLHLSAVYGGAISGRGPRYCPSIEDKVVRFSEKTGHQIFLEPEAL 300 Query: 301 ----NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLE 356 D+VYPNGIST+LP ++Q I +IPGLEK I + GYA+EYDY++P+EL +LE Sbjct: 301 PEHEGGDLVYPNGISTSLPADVQDAMIHSIPGLEKAVIAQYGYAVEYDYVDPRELTVSLE 360 Query: 357 TKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 KK LFLAGQINGTTGYEEA AQGL+AG+N+AR++ + R +Y+GVMIDDLT Sbjct: 361 LKKCPNLFLAGQINGTTGYEEAGAQGLLAGVNAARRAGGQKAVSLDRGKAYLGVMIDDLT 420 Query: 417 SKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRS 476 ++GV EPYRMFTSRAEYR++LR DNAD RLTPIG++ GCIG R F + +QE + L Sbjct: 421 TQGVSEPYRMFTSRAEYRLTLRADNADVRLTPIGLEWGCIGAERCAVFERDMQEIDQLTQ 480 Query: 477 LLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 +S + L+ I QDG+ R E + + ++ P +++S + Sbjct: 481 KAESESWPPQALAQVGIKVAQDGRRRNLLEVMGQAVHE-DTIETLAPWVQEYSERARSYV 539 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 + E+ Y+ Y RQ E K+++ E + P++ D+ + LS E++E+L +P + A Sbjct: 540 RTEARYSGYLVRQKREIKQLEAETEIRFPQNMDFRKIGGLSAEMQERLEQARPESFGAAQ 599 Query: 597 KIEGMTPAALNLLLIYIKKN 616 +I G+TP+AL +L Y+KK Sbjct: 600 RIPGITPSALMAVLAYLKKG 619 >gi|291615447|ref|YP_003525604.1| glucose inhibited division protein A [Sideroxydans lithotrophicus ES-1] gi|291585559|gb|ADE13217.1| glucose inhibited division protein A [Sideroxydans lithotrophicus ES-1] Length = 628 Score = 577 bits (1487), Expect = e-162, Method: Compositional matrix adjust. Identities = 294/619 (47%), Positives = 407/619 (65%), Gaps = 6/619 (0%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 + +DVIVIGGGHAG EAA +A+ G +T L+TH T+G MSCNP+IGG+GKGHLV+E+ Sbjct: 4 QKKFDVIVIGGGHAGTEAALASARAGCTTLLLTHNIETLGVMSCNPSIGGIGKGHLVKEV 63 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G M D GIQFR+LN KGPAVR R QADR LY+ A+++ + +Q NL + Q Sbjct: 64 DALGGAMAAATDEGGIQFRILNASKGPAVRATRAQADRALYKQAIRKRLENQPNLWIFQQ 123 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 E+ + + Q R TVVLTTGTFL G++H+G PAGR GD PS L Sbjct: 124 PAEKLILEQGHVVGVQTQLGLSYRAKTVVLTTGTFLSGLVHVGLTNYPAGRAGDPPSIGL 183 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECG 241 ++ + TGRLKTGTP R+DG++I + ++Q D + FSFM + RQ+ C Sbjct: 184 AHNLRELGMPTGRLKTGTPPRIDGRSIDYSAMQEQHGDIPVPVFSFMGRAEQHPRQLPCW 243 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT+TN +TH II + S +++G I+ GPRYCPSIEDKI RF + HQIFLEPEGL+ Sbjct: 244 ITQTNEQTHEIIRNGLGESPLFTGVIEGVGPRYCPSIEDKITRFAGKTSHQIFLEPEGLS 303 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T +YPNGIST+L + Q + +R+I GLE +I RPGYAIEYDY +P+ L +LE+K IS Sbjct: 304 THEIYPNGISTSLSYDTQLELVRSIKGLENAHITRPGYAIEYDYFDPRGLKTSLESKTIS 363 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLFLAGQINGTTGYEEAAAQGL+AG+N+A ++ +L+ C R ++Y+GV++DDL ++GV Sbjct: 364 GLFLAGQINGTTGYEEAAAQGLLAGVNAALQAKELETWCPRRDEAYLGVLVDDLITRGVS 423 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF----AKYIQEYNFLRSL 477 EPYRMFTSRAEYR+ LR DNAD RLT G KLG + + R + F K +E L+S Sbjct: 424 EPYRMFTSRAEYRLQLREDNADMRLTETGRKLGLVEDARWQAFEGKREKIARELERLKST 483 Query: 478 LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 + + K + + + K+ + + Y+ L P+ S Q+L ++ +S + E+++ Sbjct: 484 WVNPRMLDK-IDAERVLGKEIEREYSLYDLLRRPEVSYQSLMTLPGMHNPEASGISEQVE 542 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I + Y Y RQ E + E +P D DYS++ LS E+++KL+ KP L QA++ Sbjct: 543 ILAKYHGYIERQHDEIARQEGYETTQLPLDMDYSTVRGLSIEVRQKLNQHKPQTLGQAAR 602 Query: 598 IEGMTPAALNLLLIYIKKN 616 I G+TPAA++LLL+++K+ Sbjct: 603 ISGVTPAAISLLLVHLKRG 621 >gi|320167248|gb|EFW44147.1| glucose-inhibited division protein A [Capsaspora owczarzaki ATCC 30864] Length = 689 Score = 577 bits (1486), Expect = e-162, Method: Compositional matrix adjust. Identities = 311/620 (50%), Positives = 409/620 (65%), Gaps = 11/620 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 I YDVIV+GGGHAG EAAA AA++GA+T L+THK TIG MSCNP+ GG+GKG LVRE Sbjct: 43 IGSMYDVIVVGGGHAGTEAAAAAARMGANTLLVTHKLETIGEMSCNPSFGGIGKGTLVRE 102 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDALDGL GRV D AG+QFRVLN +GPAV GPR Q DR+LY+ MQ I + NL V Sbjct: 103 IDALDGLCGRVCDEAGVQFRVLNQSRGPAVWGPRAQMDRDLYKQYMQDTIFTYPNLSVKA 162 Query: 122 GEVAGF----NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 V + + I+ IV+ + I+ VVLTTGTFLR I+IG PAGR+GD Sbjct: 163 AAVEDLLLDESPSQPQIAGIVLANGETIKSKAVVLTTGTFLRAQINIGLECFPAGRIGDE 222 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI--TN 235 P+ L + +F F GRLKTGTP RL+GKTI + Q D +PFSFM + N Sbjct: 223 PAIGLGRTLERFGFALGRLKTGTPPRLEGKTINYSNLVPQLGDNPPLPFSFMNTTVRNAN 282 Query: 236 RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFL 295 Q++C +T T+ H+II ENI S + + GPRYCPS+E KI+RF ++ HQ++L Sbjct: 283 NQLKCFMTLTSTAGHKIIRENIHLSRHVMEETR--GPRYCPSVESKILRFTDKASHQVWL 340 Query: 296 EPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTL 355 EPEG NT VVYPNGIST LP E+Q QF+RTIPGLE V ++RPGY +EYDYI+P++L +L Sbjct: 341 EPEGYNTTVVYPNGISTTLPRELQLQFLRTIPGLENVEMLRPGYGVEYDYIDPRQLRESL 400 Query: 356 ETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDL 415 ET+KI+ LFLAGQINGTTGYEEAA+QG++AGIN+A + R D Y+GV++DDL Sbjct: 401 ETQKINRLFLAGQINGTTGYEEAASQGILAGINAALAVAEKPAFTLDRADGYLGVLVDDL 460 Query: 416 TSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLR 475 SKG EPYRMFTSRAEYR+ LR DNAD RLT G+++GC+G R++ F Q+ LR Sbjct: 461 LSKGAPEPYRMFTSRAEYRLHLRSDNADARLTAKGIEVGCVGPDRKRAFETLTQQLQTLR 520 Query: 476 SLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIER 535 S L S+ + ++ ++ I DG +A+E L +F + + ++ P KFS+ V +R Sbjct: 521 SALNSITKSPEDWTAQGIPVAPDGTKPSAFEILDRANFDLDRVRAVVPSLPKFSAAVDQR 580 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 + I++ Y +Q + + EE +IP DFDY S L E+++ L + KP + +A Sbjct: 581 ITIDARYEGLLAKQASDIATYRREESTVIPFDFDYKS---LGTEVQQTLMLHKPRTIKEA 637 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S + G TP AL LLL +IK+ Sbjct: 638 SLLHGTTPTALILLLQHIKR 657 >gi|15594523|ref|NP_212312.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Borrelia burgdorferi B31] gi|2688059|gb|AAC66557.1| glucose inhibited division protein A (gidA) [Borrelia burgdorferi B31] Length = 627 Score = 577 bits (1486), Expect = e-162, Method: Compositional matrix adjust. Identities = 296/624 (47%), Positives = 403/624 (64%), Gaps = 8/624 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 IN +D IVIGGGHAG EAA ++L T +IT TIG +SCNPAIGGL KG++VRE Sbjct: 5 INMDFDAIVIGGGHAGIEAALALSRLNFKTLMITQNLDTIGKLSCNPAIGGLAKGNMVRE 64 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G MGR+ D + IQFRVLN +GPAV+ PR QAD+ +Y+ + + Q+NLD+ Q Sbjct: 65 IDALGGEMGRIIDFSMIQFRVLNKSRGPAVQAPRAQADKLMYQTKAKETLERQDNLDLFQ 124 Query: 122 GEVAGF--NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 V F N+ +N I +V + + R S VVLTTGTFLRG I IG+ + GR+ + + Sbjct: 125 DTVVDFLLNSMRNEIEGVVTERGNKFRSSVVVLTTGTFLRGKIFIGEYRADMGRLAEFSA 184 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIE 239 L + + F+ GRLKTGTPAR+ K++ + KTE QF D +IPFSF K+ Q+ Sbjct: 185 YGLDKTLLGLGFEMGRLKTGTPARIHKKSVDFSKTEVQFGDSDIIPFSFSNGKLDKSQLS 244 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +T TN +TH II EN+ S +YSG+I GPRYCPSIEDKIV+F +++ HQIF+EPEG Sbjct: 245 CYVTYTNKKTHEIISENMHLSPLYSGEIVGNGPRYCPSIEDKIVKFKDKDRHQIFIEPEG 304 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 NT+ +Y NG+S++LPE IQ + I +I GLE I RPGYA+EYDYINP EL+P LE+K+ Sbjct: 305 FNTEEMYLNGLSSSLPENIQQKLINSIEGLEHAVITRPGYAVEYDYINPIELYPNLESKR 364 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 + GLF+AGQ NG++GYEEAAAQGL+AGIN+A + + +RT SYIGV+IDDL +KG Sbjct: 365 VKGLFIAGQTNGSSGYEEAAAQGLMAGINAALRLQNKKPMILTRTSSYIGVLIDDLVTKG 424 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAE+R++LR D +D RL IG LG + E+R R+ ++ LLK Sbjct: 425 TKEPYRMFTSRAEHRLNLRHDTSDKRLIKIGYDLGLVDEKRYSRYLFKESRVEEIKELLK 484 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 L+ K++ + + ++ Y L P S+ NL I P S +++E+++++ Sbjct: 485 QRRLSLKDVVDEQL---KKHVSKDFYHILKDPSISLDNLIKIDPSLSD-SKVILEQVELD 540 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ K + E +P DF+Y + LS E +EK S ++P L QAS+I Sbjct: 541 VKYEGYINRQKDLIKRLDNLELVKLPFDFNYEIIEGLSREAREKFSKIQPATLAQASRIP 600 Query: 600 GMTPAALNLLLIYIK--KNTVKLN 621 G+ + +LLIY KN V +N Sbjct: 601 GIRSTDITVLLIYFSNPKNKVVIN 624 >gi|189426683|ref|YP_001953860.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Geobacter lovleyi SZ] gi|189422942|gb|ACD97340.1| glucose inhibited division protein A [Geobacter lovleyi SZ] Length = 624 Score = 576 bits (1484), Expect = e-162, Method: Compositional matrix adjust. Identities = 300/615 (48%), Positives = 401/615 (65%), Gaps = 9/615 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAA AA++G T L+ + MSCNP+IGGL KGHLVREIDAL Sbjct: 8 YDVIVVGAGHAGCEAALAAARMGCLTLLLNMSLDGMAVMSCNPSIGGLAKGHLVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + DA GIQFRVLN +KGPAVR R QAD++LYRL M+R + Q NL V QGEV Sbjct: 68 GGEMAKNIDATGIQFRVLNTRKGPAVRAGRAQADKQLYRLRMKRVLEQQPNLHVKQGEVT 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + E + + + TVVLTTGTF+RG+IHIG + GR GD PS L + Sbjct: 128 ALHLESGELRGVDTRSGIRFLGKTVVLTTGTFMRGLIHIGLINYAGGRAGDLPSLGLSDQ 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 F+ GRLKTGTPARLDG+TI + + E Q++D+ +PFSF T++IT Q+ C I T Sbjct: 188 LKALGFEVGRLKTGTPARLDGRTIDFSRLEAQYSDDPPVPFSFSTERITMPQVPCYIAYT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N TH II + S +Y+G I+ GPRYCPSIEDK+VRF ++ HQ F+EPEGL T Sbjct: 248 NQRTHEIIRSGLDRSPLYAGIIEGIGPRYCPSIEDKVVRFPDKERHQTFVEPEGLETVEY 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YP+G+ST+LP +IQ F R++ GLE+V I+RP Y IEYDY+NP +L TLETK I LF Sbjct: 308 YPSGMSTSLPIDIQIAFYRSMVGLEQVEIMRPAYGIEYDYVNPVQLHATLETKLIKNLFH 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGT+GYEEAA QG++AGIN+A K + I R +SYIGVM+DDL + G EPYR Sbjct: 368 AGQINGTSGYEEAAGQGILAGINAALKVKGREPIMLGRHESYIGVMVDDLVTLGTREPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAEYR+ LR DNAD RL IG +G + E +A + ++ +R L+ + T Sbjct: 428 MFTSRAEYRLLLREDNADIRLREIGHSVGLVDE---TTYAGFCRKQGQIRDELERIRATR 484 Query: 486 KNLSSTSISF-KQDG-----KTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 +L+ S+ K+ G K + + L P+ Q L I A + S V E+++I+ Sbjct: 485 LSLNPEEKSWCKRHGCADLHKGASYEQLLRRPEIGYQQLQEIDRQAAELPSAVREQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ+ + + ++ +E+ IP D DY ++P L++E++EKL KP L QA++I+ Sbjct: 545 VKYQGYIERQLEQIERVRKQEEARIPSDLDYKAVPGLTSEVREKLERFKPDTLGQAARIQ 604 Query: 600 GMTPAALNLLLIYIK 614 G+TPAA+ ++ + +K Sbjct: 605 GVTPAAIAIISVMLK 619 >gi|118602124|ref|YP_903339.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|205375713|sp|A1AVB1|MNMG_RUTMC RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|118567063|gb|ABL01868.1| glucose inhibited division protein A [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 624 Score = 575 bits (1483), Expect = e-162, Method: Compositional matrix adjust. Identities = 297/614 (48%), Positives = 400/614 (65%), Gaps = 4/614 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 +SY VIVIGGGHAG EAA +A++G T LI+H T+G MSCNPAIGG+GKGHLV+EID Sbjct: 7 KSYSVIVIGGGHAGTEAALSSARMGVCTLLISHNIETLGQMSCNPAIGGIGKGHLVKEID 66 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 A+ G+M R D +GIQFR LN KGPAVR R QADR LY+ ++ + +Q+NL + Q Sbjct: 67 AMGGIMARAIDKSGIQFRTLNASKGPAVRATRAQADRILYKAQIRYTLENQDNLSLFQQA 126 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + I +V Q V+LT+GTFL GVIHIG+ GR GD+PSN+L Sbjct: 127 VDDLIIEHDQIKGVVTQMGLAFMADKVILTSGTFLGGVIHIGQRNFQGGRAGDAPSNALS 186 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGI 242 +D RLKTGTP RLD +T+ + + Q D L FSFM K + RQI C I Sbjct: 187 GKLRSYDLRVSRLKTGTPPRLDNRTLNYSLMQVQPGDTPLPTFSFMGVKEDHPRQIPCYI 246 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH +I + +K S +++G+I+ PRYCPSIEDK+VRF ER+ HQIF+EPEGL T Sbjct: 247 THTNEKTHDLIRDGLKDSPMFTGNIEGISPRYCPSIEDKVVRFSERDSHQIFVEPEGLTT 306 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VYPNG+ST+L E+Q FIR+I G EK +IIRPGYAIEYD+ +P+ L TLE KKISG Sbjct: 307 NEVYPNGVSTSLSYEVQLNFIRSIKGFEKAHIIRPGYAIEYDFFDPRGLKQTLEVKKISG 366 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQINGTTGYEEAAAQGL+AG+N+A + D R +SYIGVM+DDL +KG E Sbjct: 367 LYFAGQINGTTGYEEAAAQGLLAGVNAACAILERDAWLPKRNESYIGVMVDDLITKGANE 426 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLTP LG I E + F + ++ LK+ Sbjct: 427 PYRMFTSRAEYRLLLREDNADERLTPKARDLGLISEVCWQSFQVKYEAITQEKNRLKNTW 486 Query: 483 LTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF--SSLVIERLQIES 540 + + + + + + + E L P Q + S + F + +I ++ + Sbjct: 487 IQASDTQAGVVLNQNLNHEYSLLELLKRPKIDYQ-ILSQIESGKPFLTDATLINSIENQI 545 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 YA Y RQ+ E ++ + E ++ + DY S+ ALS+E+++KL + KP + QAS+I+G Sbjct: 546 KYAGYIKRQLEEIEKYRKNENTILSVNIDYDSIKALSSEVRQKLELHKPETIGQASRIQG 605 Query: 601 MTPAALNLLLIYIK 614 +TPA++++LL+Y+K Sbjct: 606 VTPASISILLVYLK 619 >gi|328870532|gb|EGG18906.1| Glucose inhibited division protein [Dictyostelium fasciculatum] Length = 724 Score = 575 bits (1483), Expect = e-162, Method: Compositional matrix adjust. Identities = 304/629 (48%), Positives = 414/629 (65%), Gaps = 22/629 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+VIGGGHAG EA A +A++GA T LIT +TIG MSCNP+IGG+GKG+LVRE+DAL Sbjct: 87 YDVVVIGGGHAGTEACAASARVGAQTLLITQSINTIGVMSCNPSIGGIGKGNLVREVDAL 146 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQE------NLDV 119 G+MG AD +G QF++LN KG AV GPR Q DRELY+ ++ +IL+ NL + Sbjct: 147 GGVMGLAADQSGCQFKILNQSKGSAVHGPRAQIDRELYQASVH-DILAGYSHDQGGNLSI 205 Query: 120 IQGEVAGF----NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMG 175 + V + EK ++ +++ D ++I+ VV+TTGTFL GVIHIG +PAGR+G Sbjct: 206 REAMVDDLLLEQDGEKERVAGVILSDGTIIKTRKVVITTGTFLGGVIHIGSKMVPAGRIG 265 Query: 176 DSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KI 233 D + L + +F F GRLKTGTP RLDGK+I + + Q D PFSFM D K Sbjct: 266 DKAATKLSQTLARFGFQLGRLKTGTPPRLDGKSINYQGLQVQEGDVIPTPFSFMNDSVKY 325 Query: 234 TNRQIECGITRTNLETHRIIMENI-KHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQ 292 + Q+ C +TRT E+HRI++ENI + + SGD K GPRYCPSIE KI RF E HQ Sbjct: 326 ADNQLYCYMTRTTEESHRIVLENIDRRPTLDSGDGKGLGPRYCPSIETKIERF-EAKTHQ 384 Query: 293 IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF 352 I+LEPEG NTDV+YP+GIS +LPEE+Q +F++TIPGLE+VN++RPGYA+EYDY++P+EL Sbjct: 385 IWLEPEGYNTDVIYPSGISISLPEEVQLRFLKTIPGLEQVNMLRPGYAVEYDYVDPRELR 444 Query: 353 PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARK--SNKLDCICFSRTDSYIGV 410 PTLETKKI GL+ AGQINGTTGYEEAAAQG++AGIN++ SNK I R++ Y+GV Sbjct: 445 PTLETKKIPGLYFAGQINGTTGYEEAAAQGILAGINASLSLDSNKQQMI-VDRSEGYLGV 503 Query: 411 MIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQE 470 M+DDL + GV EPYRMFTSR+EYRISLR N+D RLT G + C+ + R ++F K Sbjct: 504 MVDDLVTLGVTEPYRMFTSRSEYRISLRAHNSDQRLTKKGYQFDCVTQDRYQQFLKKENI 563 Query: 471 YNFLRSLLKSLVLTSKN-LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDAR--K 527 N + L S + K L I +GK ++ ++ L P +++ L + R Sbjct: 564 INDTINYLNSTFFSPKEYLEKCGIGSINNGK-KSLFDILKRPHITLETLVPLFGRERLDA 622 Query: 528 FSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSIL 587 +I ++ E Y+ Y RQ E + + EE R IP DY + LS E+++KLS Sbjct: 623 IPHHIIPVIESECQYSDYLVRQQTEIERFQKEESRAIPDSLDYYKVGQLSTEMRQKLSET 682 Query: 588 KPFNLLQASKIEGMTPAALNLLLIYIKKN 616 +P + AS++ G+TP + ++ +I+K+ Sbjct: 683 RPTTIGSASRVPGVTPTGIAAIISFIRKH 711 >gi|325983682|ref|YP_004296084.1| glucose inhibited division protein A [Nitrosomonas sp. AL212] gi|325533201|gb|ADZ27922.1| glucose inhibited division protein A [Nitrosomonas sp. AL212] Length = 627 Score = 575 bits (1482), Expect = e-162, Method: Compositional matrix adjust. Identities = 304/620 (49%), Positives = 400/620 (64%), Gaps = 15/620 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D+IV+GGGHAG EAA AA++G T L+TH TIG MSCNP+IGG+GK HLV+EIDAL Sbjct: 7 FDIIVVGGGHAGTEAALAAARMGCQTLLLTHNIETIGQMSCNPSIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG AD AGIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL V+Q V Sbjct: 67 GGAMGMAADEAGIQFRILNSSKGPAVRATRAQADRVLYKQAIRNRVENQPNLRVMQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q I V+LT GTFL G+ HIGK AGR GD PS +L Sbjct: 127 DLIIEQDRVVGVVTQLQIKIHARAVILTVGTFLAGLAHIGKTHFKAGRAGDPPSITLAQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + +F GRLKTGTP R+DG+T+ + K +Q D+ FS + I + RQI C IT Sbjct: 187 LREMEFPAGRLKTGTPPRIDGRTMNYAKLLEQPGDQPTPWFSLIATDIRHPRQISCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH +I + + S ++SG I+ GPRYCPSIEDK+VRF R HQIFLEPEGL T Sbjct: 247 TNDRTHDVIRDGLVDSPLFSGKIEGIGPRYCPSIEDKVVRFSARESHQIFLEPEGLGTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+L E+Q + I +I GLE +I RPGYAIEYDY +P+ L +LETK I LF Sbjct: 307 IYPNGISTSLSFEVQVKLIHSIAGLENAHITRPGYAIEYDYFDPRNLKRSLETKTIENLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+A K + D R ++Y+GV++DDL + GV EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGVNAALKIQRRDAWVPQRNEAYLGVLVDDLVTSGVTEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFA-------KYIQEYNFLRSL 477 RMFTSRAEYR+ LR DNAD RLT G LG I ++R F+ K Q N R L Sbjct: 427 RMFTSRAEYRLQLREDNADLRLTETGRNLGLIDDQRWAAFSAKQEAIEKEQQRLNSTRVL 486 Query: 478 LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARK--FSSLVIER 535 +L + + K + T E L PD + +L ++ P A + ++ V+E+ Sbjct: 487 PGTL----PQQDAIRVLGKSIEREYTLTELLKRPDVTYHSLMTL-PGAGEPVTNAQVVEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I++ Y Y RQ E E L+PKD DY ++ LSNE+++KL+ KP + QA Sbjct: 542 VEIQAKYHGYIQRQQEEVSRQAQYENTLLPKDIDYCAVKGLSNEVQQKLNQHKPETVGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G+TPAA++LLL+++K+ Sbjct: 602 SRISGVTPAAISLLLVHLKR 621 >gi|332184275|gb|AEE26529.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Francisella cf. novicida 3523] Length = 627 Score = 575 bits (1481), Expect = e-161, Method: Compositional matrix adjust. Identities = 308/617 (49%), Positives = 404/617 (65%), Gaps = 6/617 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+GGGHAG EAAA +A++GA T L+TH TIG MSCNPAIGG+GKGHLV+EIDA Sbjct: 6 SYDVIVVGGGHAGVEAAAASARIGAKTLLLTHNIDTIGQMSCNPAIGGIGKGHLVKEIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 + G+M + D AGIQFR+LN +KGPAVR R QADR LY+ A+ I +QENLD+ Q V Sbjct: 66 MGGIMAKAIDMAGIQFRILNSRKGPAVRATRAQADRVLYKKAINSLINNQENLDIFQDSV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E N + ++ + R VVLT GTFL G IHIGK+ GR GD PSN+L Sbjct: 126 DDLVVENNTVCGVITKTGITFRAKKVVLTVGTFLGGKIHIGKVSNAGGRAGDQPSNALAA 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITN-RQIECGI 242 F RLKTGTP R+D +++ + E Q D FSF + K+ + +QI C I Sbjct: 186 RLRSLPFRVDRLKTGTPPRIDRRSVDFSVMEVQHGDSPTPYFSFFSKGKVEHPQQIPCYI 245 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN ETH+II +N+ SA+YSG I+ GPRYCPSIEDK+VRF ++ HQIF+EPEGLN+ Sbjct: 246 TYTNHETHKIITDNLDKSAMYSGLIEGIGPRYCPSIEDKVVRFADKERHQIFVEPEGLNS 305 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNG+ST+LP E+Q +IR+I G E I+RPGYAIEYD+ +P++L PTLETK I Sbjct: 306 IELYPNGLSTSLPFEVQCNYIRSIKGFENAFIMRPGYAIEYDFFDPRDLKPTLETKHIKN 365 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQINGTTGYEEA AQGLVAGIN+A + +R DSYIGV+IDDL +KG E Sbjct: 366 LYFAGQINGTTGYEEAGAQGLVAGINAAISLDSDKSWYPTRADSYIGVLIDDLITKGTKE 425 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RL+ +LG + + Q+ F N +++K+ Sbjct: 426 PYRMFTSRAEYRLILREDNADLRLSDKACELGLLNKEDQQLFINKKSAINENITMMKNTW 485 Query: 483 LTSKNLSSTSISFKQDGK-TR--TAYEFLSYPDFSIQNLFSICP-DARKFSSLVIERLQI 538 + + + + D K TR T ++ L P+ L I + VIE+++I Sbjct: 486 IGPQTQKARDLEKFLDKKMTRESTLFDLLKRPEIDYSKLQQIPELNLNLQDEAVIEQIEI 545 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + Y+ Y RQ + + E++ IP DF+YS + LSNE+ +KL+ KP L +AS+I Sbjct: 546 SAKYSGYIERQNKDIAKSATLEQKTIPTDFNYSQVKGLSNEVLQKLTEQKPTTLGEASRI 605 Query: 599 EGMTPAALNLLLIYIKK 615 G+TPAA++LL IY+KK Sbjct: 606 PGITPAAISLLTIYMKK 622 >gi|148244241|ref|YP_001218935.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Candidatus Vesicomyosocius okutanii HA] gi|166224336|sp|A5CXV2|MNMG_VESOH RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|146326068|dbj|BAF61211.1| glucose inhibited division protein A GidA [Candidatus Vesicomyosocius okutanii HA] Length = 621 Score = 575 bits (1481), Expect = e-161, Method: Compositional matrix adjust. Identities = 294/614 (47%), Positives = 401/614 (65%), Gaps = 2/614 (0%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 ++ Y VIVIGGGHAG EAA +A++G ST LI+H T+G MSCNPAIGG+GKGHLV+EI Sbjct: 4 SKRYLVIVIGGGHAGTEAALASARMGVSTLLISHNIETLGQMSCNPAIGGIGKGHLVKEI 63 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DA+ G+M D +GIQFR LN KG AVR R QADR LY+ ++ + +Q+NL + Q Sbjct: 64 DAMGGIMAHTIDKSGIQFRTLNASKGSAVRATRAQADRILYKSEIRYALENQDNLSLFQQ 123 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 V + + I +V Q + V+LT+GTFL G+IHIG+ GR GD+PSN+L Sbjct: 124 SVDDLIIKGDQIKGVVTQMGLALMADKVILTSGTFLGGIIHIGQRNFQGGRAGDAPSNAL 183 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECG 241 +D RLKTGTP RLDG+T+ + + Q D L FSF+ K + RQI C Sbjct: 184 SRKLRSYDLGVNRLKTGTPPRLDGRTLDYSLMQVQSGDIPLPTFSFIGVKEEHPRQIPCY 243 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT TN TH +I +K S I++G+I+S GPRYCPSIEDK+VRF ER+ HQIF+EPEGL+ Sbjct: 244 ITHTNKRTHDLIRSGLKDSPIFTGNIESIGPRYCPSIEDKVVRFNERDSHQIFVEPEGLS 303 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ VYPNG+ST+L ++Q FI +I G E IIRPGYAIEYD+ +P+ L TLE KKIS Sbjct: 304 TNEVYPNGVSTSLSYKVQLDFINSIKGFENAQIIRPGYAIEYDFFDPRGLKQTLEVKKIS 363 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GL+ AGQINGTTGYEEAAAQGL+AG+N+A + D R +SYIGVM+DDL +KG Sbjct: 364 GLYFAGQINGTTGYEEAAAQGLLAGVNAACAILEKDAWLPKRDESYIGVMVDDLITKGTN 423 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+ LR DNAD RLTP +LG I E R + F + LK+ Sbjct: 424 EPYRMFTSRAEYRLLLREDNADERLTPKAKELGLISEARWQSFQVKYNAVEQEKKRLKNT 483 Query: 482 VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIER-LQIES 540 + + + + +I + + +E L P Q L I + + + R ++ + Sbjct: 484 WIQANDTQANTILNQNISHEYSLFELLKRPKVDYQILSKIESGKPFLTDITLMRVIENQI 543 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 YA Y RQ++E ++ + E ++ + +Y+S+ ALS E+++KL + KP + QAS+I+G Sbjct: 544 KYAGYIKRQLVEIEKYRKNENTVLSTNINYNSIKALSTEVRQKLELHKPETIGQASRIQG 603 Query: 601 MTPAALNLLLIYIK 614 +TPA++++LL+Y+K Sbjct: 604 VTPASISILLVYLK 617 >gi|229845662|ref|ZP_04465786.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Haemophilus influenzae 6P18H1] gi|229811400|gb|EEP47105.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Haemophilus influenzae 6P18H1] Length = 629 Score = 575 bits (1481), Expect = e-161, Method: Compositional matrix adjust. Identities = 301/623 (48%), Positives = 396/623 (63%), Gaps = 17/623 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIGGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DA Sbjct: 6 TYDVIVIGGGHAGTEAALAPARMGLKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 + GLM AD AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q E Sbjct: 66 MGGLMAHAADKAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIFQQEA 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E++ ++ + + + R +VVLT GTFL G IHIG GR GD S +L Sbjct: 126 TDILIEQDRVTGVSTKMGLIFRAKSVVLTAGTFLAGKIHIGLENYEGGRAGDPASVNLSY 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 RLKTGTP R+D +TI +D KQ D L FSFM + +QI C IT Sbjct: 186 RLRDLGLRVDRLKTGTPPRIDARTINFDILAKQHGDAVLPVFSFMGSVFDHPQQIPCYIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL ++ Sbjct: 246 HTNEQTHEVIRNNLDRSPMYTGVIEGVGPRYCPSIEDKVMRFADRNSHQIYLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNGIST+LP ++Q + ++ GLEK II+PGYAIEYDY +P++L PTLETK ISGL Sbjct: 306 EVYPNGISTSLPFDVQMGIVNSMKGLEKARIIKPGYAIEYDYFDPRDLKPTLETKAISGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ + + R SY GV++DDL + G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGINAGLYVQEKEAWYPRRDQSYTGVLVDDLCTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+FTSRAEYR+ LR DNAD RLTPI +LG I E R RF + +++ R L+S+ L Sbjct: 426 YRVFTSRAEYRLLLREDNADIRLTPIAHELGLIDEARWARFNQKMEKIEQERQRLRSIWL 485 Query: 484 ---------TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VI 533 T+K L S + + + + L P+ + L S+ P + Sbjct: 486 HPRSEYLEETNKVLGSPLV------REASGEDLLRRPEMTYDILTSLTPYKPAMEDREAV 539 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I Y Y Q E ++ K E IP +FDYS + LSNE++ KL +P ++ Sbjct: 540 EQVEIAIKYQGYIEHQQEEIEKQKRHENTAIPANFDYSKVSGLSNEVRAKLEQHRPVSIG 599 Query: 594 QASKIEGMTPAALNLLLIYIKKN 616 QAS+I G+TPAA++++L+ +KK Sbjct: 600 QASRISGITPAAISIILVNLKKQ 622 >gi|320174632|gb|EFW49768.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella dysenteriae CDC 74-1112] Length = 629 Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust. Identities = 294/616 (47%), Positives = 399/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 DGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A + E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKKQ 622 >gi|281207409|gb|EFA81592.1| Glucose inhibited division protein [Polysphondylium pallidum PN500] Length = 721 Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust. Identities = 303/626 (48%), Positives = 412/626 (65%), Gaps = 23/626 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DV+VIGGGHAG EA A A+++GAST LIT +TIG MSCNP+IGG+GKG+LVRE+DAL Sbjct: 87 FDVVVIGGGHAGTEACAAASRVGASTLLITQSINTIGVMSCNPSIGGIGKGNLVREVDAL 146 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+MG ADA+G QF++LN KG AV GPR Q DR+LY+ + + Q+NL++ + V Sbjct: 147 GGVMGLAADASGCQFKILNQSKGSAVHGPRAQIDRDLYQQEIHTLLAGQDNLNIREAMVE 206 Query: 126 G--FNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 + N + +++ D S+I+ VV+TTGTFL GVIH+G + AGR+GD + L Sbjct: 207 DMLLDDTDNSVVGVLLNDGSVIKTKKVVITTGTFLGGVIHVGNKTVLAGRVGDRAATKLS 266 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KITNRQIECG 241 + +F F GRLKTGTP RLDGK+I + E Q DE+ PFSF+ D K +RQ++C Sbjct: 267 QTLARFGFALGRLKTGTPPRLDGKSIDYTGLEIQNGDEKPTPFSFLNDTVKYRDRQLQCF 326 Query: 242 ITRTNLETHRIIMENIK-HSAIYSG-DIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 +TRT ++H+II++N+ A+ SG D K GPRYCPSIE KI RF R HQ++LEPEG Sbjct: 327 MTRTTEQSHQIILDNLDTRPALESGVDGKGLGPRYCPSIETKIERFQGRT-HQVWLEPEG 385 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 NTDV+YPNGIS +LPE++Q QF++TIPGLE V ++RPGYA+EYDY++P+EL TLETKK Sbjct: 386 YNTDVIYPNGISISLPEDVQLQFLKTIPGLENVVMLRPGYAVEYDYVDPRELRSTLETKK 445 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDC-ICFSRTDSYIGVMIDDLTSK 418 + GL+ AGQINGTTGYEEAAAQG+VAGIN+A +K + R++ YIGV+IDDL + Sbjct: 446 VKGLYFAGQINGTTGYEEAAAQGIVAGINAALSLDKSRSPMIVDRSEGYIGVLIDDLVTL 505 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 GV EPYRMFTSR+EYRISLR N+D RLT G + + + R R+A+ N + L Sbjct: 506 GVTEPYRMFTSRSEYRISLRAHNSDQRLTQKGFQHSSVTKERLDRYAQKESIINETMNYL 565 Query: 479 KSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSI--------QNLFSICPDARKFSS 530 K N + G ++ +E L P S+ +N++S P S Sbjct: 566 KETKY-QPNEYLEKCGIENIGSKKSIFEILKRPHTSLALLKPLIDENVYSSIP------S 618 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 L++ ++ E Y+ Y RQ E K EE R IP+ +Y + LS E+K+KLS +P Sbjct: 619 LIVPVIESECQYSDYLVRQQAEIDRFKREESREIPEAINYWEIGQLSTEIKQKLSEARPP 678 Query: 591 NLLQASKIEGMTPAALNLLLIYIKKN 616 L AS++ G+TP+ + +L YI+KN Sbjct: 679 TLGSASRVPGVTPSGILAILSYIRKN 704 >gi|325576882|ref|ZP_08147497.1| glucose inhibited division protein A [Haemophilus parainfluenzae ATCC 33392] gi|325161088|gb|EGC73206.1| glucose inhibited division protein A [Haemophilus parainfluenzae ATCC 33392] Length = 629 Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust. Identities = 298/617 (48%), Positives = 394/617 (63%), Gaps = 5/617 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+GGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DA Sbjct: 6 NYDVIVVGGGHAGTEAALAPARMGLKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 + GLM AD AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q EV Sbjct: 66 MGGLMAHAADKAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRIALENQPNLDIFQQEV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E++ + + + R +VVLT GTFL G IHIG GR GD S +L + Sbjct: 126 TDILVEQDCVCGVETKMGLKFRAKSVVLTAGTFLAGKIHIGLEHYEGGRAGDPASVTLSH 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 + RLKTGTP R+D +TI +D KQ DE L FSFM + +QI C IT Sbjct: 186 RLRDLNLRVDRLKTGTPPRIDARTINFDILAKQHGDEVLPVFSFMGSVDDHPQQIPCYIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL ++ Sbjct: 246 HTNEQTHEVIRNNLDRSPMYTGVIEGIGPRYCPSIEDKVMRFADRNSHQIYLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNGIST+LP ++Q + ++ GLEK II+PGYAIEYDY +P++L PTLETK ISGL Sbjct: 306 EVYPNGISTSLPFDVQMGIVNSMKGLEKARIIKPGYAIEYDYFDPRDLKPTLETKSISGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ + + R SY GV++DDL + G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGINAGLYVQEKEAWYPRRDQSYTGVLVDDLCTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+FTSRAEYR+ LR DNAD RLTPI +LG I E R RF + ++ R L+S+ L Sbjct: 426 YRVFTSRAEYRLLLREDNADIRLTPIAYELGLIDEARWARFNQKMENIEQERQRLRSIWL 485 Query: 484 TSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VIERLQIE 539 ++ + + + + L P+ + L S+ P +E+++I Sbjct: 486 HPRSEYLEEANKVLGSPLVREANGEDLLRRPEMTYDILTSLTPYKPAMEDREAVEQVEIA 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y Q E ++ K E IP +FDYS + LSNE++ KL +P ++ QAS+I Sbjct: 546 IKYQGYIEHQQEEIEKQKRHENTAIPANFDYSKVSGLSNEVRAKLEQHRPVSIGQASRIS 605 Query: 600 GMTPAALNLLLIYIKKN 616 G+TPAA++++L+ +KK Sbjct: 606 GITPAAISIILVNLKKQ 622 >gi|320193714|gb|EFW68347.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli WV_060327] Length = 629 Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust. Identities = 295/616 (47%), Positives = 399/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARIGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 EK+ + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVEKDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 ++ ++ + + + L P+ + + L S+ P A + E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTSLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKKQ 622 >gi|269468172|gb|EEZ79871.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [uncultured SUP05 cluster bacterium] Length = 623 Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust. Identities = 300/620 (48%), Positives = 398/620 (64%), Gaps = 6/620 (0%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 ++ Y VIVIGGGHAG EAA +A++G +T LITH T+G MSCNPAIGG+GKGHLV+EI Sbjct: 4 SKHYSVIVIGGGHAGTEAALASARMGVNTLLITHNIETLGQMSCNPAIGGIGKGHLVKEI 63 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DA+ G M D AGIQFR LN KGPAVR R QADR LY+ +++ + +QE+L + Q Sbjct: 64 DAMGGAMATAIDKAGIQFRTLNASKGPAVRATRAQADRVLYKASIRYILENQEDLSLFQQ 123 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 V + N+I + Q V+LT+GTFL G+IHIG+ GR GD+PSN+L Sbjct: 124 AVDDLVIKDNVIKGVKTQMGLSFLADKVILTSGTFLGGMIHIGQSNFEGGRAGDAPSNAL 183 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR--QIEC 240 + +D GRLKTGTP RLDG+TI + + Q D L FSFM K+++ QI C Sbjct: 184 SRTLRAYDLGVGRLKTGTPPRLDGRTIDFSVLQAQPGDTPLPTFSFM-GKLSDHPDQIPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH I + +K S +Y+G+I+ GPRYCPSIEDK+VRF ER+ HQIF+EPEGL Sbjct: 243 YITHTNEKTHDFIRDGLKDSPMYTGNIEGIGPRYCPSIEDKVVRFAERDSHQIFVEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T+ VYPNG+ST+LP E+Q FI +I G E I+RPGYAIEYD+ +P+ L TLE KKI Sbjct: 303 TTNEVYPNGVSTSLPYEVQVDFIHSIKGFENAKIVRPGYAIEYDFFDPRGLKQTLEVKKI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 SGL+ AGQINGTTGYEEAAAQGL+AG+N+A + + R +SYIGVM+DDL +KG Sbjct: 363 SGLYFAGQINGTTGYEEAAAQGLLAGVNAACSVQEKNPWHPKRDESYIGVMVDDLITKGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLTP +LG I + R + F K + + LKS Sbjct: 423 NEPYRMFTSRAEYRLLLREDNADERLTPKARELGLIDDARWQAFEKKYKTVAQEKQRLKS 482 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF--SSLVIERLQI 538 + + + + + E L P S L I + F +I ++ Sbjct: 483 TWIQANDTQAGETLGLSLSHEYSLLELLKRPKVSYDTLSKI-ESGKPFLTDRTLIALVEN 541 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + Y Y RQ+ E ++ + E + DY S+ ALS E+++KLS KP + QAS+I Sbjct: 542 QIKYEGYIKRQLEEIEKYRKNEDTKLSGHMDYDSIKALSAEVRQKLSQYKPETIGQASRI 601 Query: 599 EGMTPAALNLLLIYIKKNTV 618 +G+TPA++++LL+Y+K V Sbjct: 602 QGVTPASISILLVYLKTYKV 621 >gi|16272526|ref|NP_438740.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Haemophilus influenzae Rd KW20] gi|260581443|ref|ZP_05849255.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Haemophilus influenzae RdAW] gi|1169896|sp|P44763|MNMG_HAEIN RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|1573570|gb|AAC22240.1| glucose inhibited division protein (gidA) [Haemophilus influenzae Rd KW20] gi|260091889|gb|EEW75840.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Haemophilus influenzae RdAW] Length = 629 Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust. Identities = 299/623 (47%), Positives = 395/623 (63%), Gaps = 17/623 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIGGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DA Sbjct: 6 TYDVIVIGGGHAGTEAALAPARMGFKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 + GLM AD AGIQFR LN KGPAVR R Q+DR LYR A++ + +Q NLD+ Q E Sbjct: 66 MGGLMAHAADKAGIQFRTLNSSKGPAVRATRAQSDRVLYRQAVRTALENQPNLDIFQQEA 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E++ ++ + + R +V+LT GTFL G IHIG GR GDS S +L + Sbjct: 126 TDILIEQDRVTGVSTKMGLTFRAKSVILTAGTFLAGKIHIGLENYEGGRAGDSASVNLSH 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 RLKTGTP R+D +TI +D KQ DE L FSFM + +QI C IT Sbjct: 186 RLRDLGLRVDRLKTGTPPRIDARTINFDILAKQHGDEVLPVFSFMGSVDDHPQQIPCYIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL ++ Sbjct: 246 HTNEQTHEVIRNNLDRSPMYTGVIEGIGPRYCPSIEDKVMRFADRNSHQIYLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNGIST+LP ++Q + ++ GLE I++PGYAIEYDY +P++L PTLETK ISGL Sbjct: 306 EVYPNGISTSLPFDVQMGIVNSMKGLENARIVKPGYAIEYDYFDPRDLKPTLETKSISGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ + D R SY GV++DDL + G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGINAGLYVQEKDAWYPRRDQSYTGVLVDDLCTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+FTSRAEYR+ LR DNAD RLTPI +LG I E R RF + ++ R L+S+ L Sbjct: 426 YRVFTSRAEYRLLLREDNADIRLTPIAHELGLIDEARWARFNQKMENIEQERQRLRSIWL 485 Query: 484 ---------TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VI 533 +K L S + + + + L P+ + L S+ P + Sbjct: 486 HPRSEYLEEANKVLGSPLV------REASGEDLLRRPEMTYDILTSLTPYKPAMEDKEAV 539 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I Y Y Q E ++ K E IP +FDYS + LSNE++ KL +P ++ Sbjct: 540 EQVEIAIKYQGYIEHQQEEIEKQKRHENTAIPANFDYSKVSGLSNEVRAKLEQHRPVSIG 599 Query: 594 QASKIEGMTPAALNLLLIYIKKN 616 QAS+I G+TPAA++++L+ +KK Sbjct: 600 QASRISGITPAAISIILVNLKKQ 622 >gi|149185269|ref|ZP_01863586.1| glucose-inhibited division protein A [Erythrobacter sp. SD-21] gi|148831380|gb|EDL49814.1| glucose-inhibited division protein A [Erythrobacter sp. SD-21] Length = 617 Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust. Identities = 292/612 (47%), Positives = 406/612 (66%), Gaps = 2/612 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R++D+IV+GGGHAG EAA VAA++GA+TAL++ + IG+MSCNPAIGGLGKGHLVRE+D Sbjct: 2 RNFDIIVVGGGHAGVEAACVAARMGAATALVSFDLTKIGAMSCNPAIGGLGKGHLVREVD 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDG++GR ADAA I +R+LN KG AV GPR QADR L+ A+Q + SQE+L++++GE Sbjct: 62 ALDGVIGRAADAAAIHYRMLNRSKGSAVWGPRVQADRALFHRAVQGNVKSQESLELVEGE 121 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 A E ++ + + D S + V+L TGTFL G + G+ + GR+G+ + L Sbjct: 122 AASLVLEGGRVTGLALADGSALSAPAVILCTGTFLGGTLFRGEERFEGGRIGEDAARVLA 181 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + + D RLKTGTP RLDGKTI W E+Q +D S ++ + N Q+ C IT Sbjct: 182 SQLREADLPMARLKTGTPPRLDGKTIDWAVLEEQPSDGEAWTMSSLSTQRMNPQVFCAIT 241 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 RTN + H II N+ S ++SG I + GPRYCPSIEDKI RFG+R GHQIFLEPEGL+TD Sbjct: 242 RTNEKAHDIIRVNLDRSPLFSGAIGAAGPRYCPSIEDKIHRFGDREGHQIFLEPEGLSTD 301 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +VYPNGIST+LP ++QH +R + GLE+V + PGYA+EYD+I+P+ L +LE K I GL Sbjct: 302 LVYPNGISTSLPTDVQHDMLRAMKGLERVEMAVPGYAVEYDHIDPRALRSSLEVKTIPGL 361 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGTTGYEEAAAQGLVAG+++A + + R++SYI VM+DDLT +GV EP Sbjct: 362 YCAGQINGTTGYEEAAAQGLVAGMSAAATVLGREPVGLDRSNSYIAVMVDDLTLQGVSEP 421 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRM TSRAEYR+ LR NAD RLT +G++ +G R + F+ + + + L+ L Sbjct: 422 YRMLTSRAEYRLRLRAANADTRLTGLGIEACLVGAERAEWFSHREERRLVIDNQLEE-EL 480 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 + L I K D ++ E+L SI+ L I +L +E ++ ++ Y Sbjct: 481 HANTLIEGGIRAKADRGSQRLREWLRGGQISIEELAGIVGGIDPQDALTVEMVE-DTIYE 539 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y RQ E +++K E+ +P DF Y+ +P LSNE+ E+L+ +P L A ++ G+TP Sbjct: 540 PYLLRQEAELRDLKAGERLRLPADFPYARVPGLSNEMIERLNKAQPETLSAAGRVPGITP 599 Query: 604 AALNLLLIYIKK 615 AAL LL++ ++ Sbjct: 600 AALAALLVHARR 611 >gi|224534360|ref|ZP_03674938.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Borrelia spielmanii A14S] gi|224514462|gb|EEF84778.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Borrelia spielmanii A14S] Length = 621 Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust. Identities = 294/620 (47%), Positives = 403/620 (65%), Gaps = 8/620 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D IVIGGGHAG EAA ++L T +IT TIG +SCNPAIGGL KG++VREIDAL Sbjct: 3 FDAIVIGGGHAGIEAALALSRLSFKTLMITQNLDTIGKLSCNPAIGGLAKGNMVREIDAL 62 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MGR+ D + IQFRVLN +GPAV+ PR QAD+ +Y+ + + Q+NLD+ Q V Sbjct: 63 GGEMGRIIDFSMIQFRVLNKSRGPAVQAPRAQADKLMYQTKAKETLERQDNLDLFQDTVV 122 Query: 126 GF--NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 F N+ +N I +V + + R S VVLTTGTFLRG I IG+ + GR+ + + L Sbjct: 123 DFLLNSMRNEIEGVVTERGNKFRSSVVVLTTGTFLRGKIFIGEYRANMGRLSEFSAYGLD 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + + F+ GRLKTGTPAR+ K++ + KTE QF D +IPFSF K+ Q+ C +T Sbjct: 183 KTLLGLGFEMGRLKTGTPARIHKKSVDFSKTEVQFGDSDIIPFSFSNGKLDKSQLSCYVT 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH II EN+ S +YSG+I GPRYCPSIEDKIV+F +++ HQIF+EPEG NT+ Sbjct: 243 YTNKKTHEIISENMHLSPLYSGEIVGNGPRYCPSIEDKIVKFKDKDRHQIFIEPEGFNTE 302 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y NG+S++LPE+IQ +FI +I GLE I RPGYA+EYDYINP EL+P LE+K++ GL Sbjct: 303 EMYLNGLSSSLPEDIQQKFINSIKGLEHAVITRPGYAVEYDYINPIELYPNLESKRVKGL 362 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F+AGQ NG++GYEEAAAQGL+AGIN+A + + +RT SYIGV+IDDL +KG EP Sbjct: 363 FIAGQTNGSSGYEEAAAQGLMAGINAALRLQNKKPMILTRTSSYIGVLIDDLVTKGTKEP 422 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R++LR D +D RL IG LG + E R ++ + ++ LLK L Sbjct: 423 YRMFTSRAEHRLNLRHDTSDKRLIKIGYDLGLVDEERYSKYLFKEKRVEEIKELLKQRRL 482 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 + K++ + + ++ Y L P S+ NL I P S +++E+++++ Y Sbjct: 483 SLKDVVDEQL---KKHVSKDFYHILKDPSISLDNLIKIDPSLSD-SKVILEQVELDVKYE 538 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y RQ K++ E +P DF+Y + LS E +EK S ++P L QAS+I G+ Sbjct: 539 GYINRQKDLIKKLHNLELIKLPLDFNYEIIEGLSREAREKFSKVQPATLAQASRIPGIRN 598 Query: 604 AALNLLLIYIK--KNTVKLN 621 + +L IY KN V LN Sbjct: 599 TDITVLFIYFSNPKNKVVLN 618 >gi|219684569|ref|ZP_03539512.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Borrelia garinii PBr] gi|219671931|gb|EED28985.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Borrelia garinii PBr] Length = 621 Score = 573 bits (1477), Expect = e-161, Method: Compositional matrix adjust. Identities = 294/620 (47%), Positives = 402/620 (64%), Gaps = 8/620 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D IVIGGGHAG EAA ++L T +IT TIG +SCNPAIGGL KG++VREIDAL Sbjct: 3 FDAIVIGGGHAGIEAALALSRLNFKTLMITQNLDTIGKLSCNPAIGGLAKGNMVREIDAL 62 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MGR+ D + IQFRVLN +GPAV+ PR QAD+ +Y+ + + Q+NLD+ Q V Sbjct: 63 GGEMGRIIDFSMIQFRVLNKSRGPAVQAPRAQADKLMYQTKAKETLERQDNLDLFQDTVV 122 Query: 126 GF--NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 F N+ +N I +V + + R S VVLTTGTFLRG I IG+ + GR+ + + L Sbjct: 123 DFILNSMRNEIKGVVTERGNKFRSSVVVLTTGTFLRGKIFIGEYRANMGRLAEFSAYGLD 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + + F+ GRLKTGTPAR+ K+I + KTE QF D +IPFSF + Q+ C +T Sbjct: 183 KTLLSLGFEMGRLKTGTPARIHKKSIDFSKTEVQFGDSDIIPFSFSNGNLDKSQLSCYVT 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH II EN+ S +YSG+I GPRYCPSIEDKIV+F +++ HQIF+EPEG NT+ Sbjct: 243 YTNKKTHEIISENMHLSPLYSGEIVGNGPRYCPSIEDKIVKFKDKDRHQIFIEPEGFNTE 302 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y NG+S++LPE IQ +FI +I GLE I RPGYA+EYDYINP EL+P LE+K++ GL Sbjct: 303 EMYLNGLSSSLPENIQQKFINSIEGLEHAIITRPGYAVEYDYINPIELYPNLESKRVKGL 362 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F+AGQ NG++GYEEAAAQGL+AGIN+A + + +RT SYIGV+IDDL +KG EP Sbjct: 363 FVAGQTNGSSGYEEAAAQGLMAGINAALRLQNKKPMILTRTSSYIGVLIDDLVTKGTKEP 422 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R++LR D +D RL IG LG + E R ++ + ++ LLK L Sbjct: 423 YRMFTSRAEHRLNLRHDTSDKRLIKIGYDLGLVDEERYSKYLFKKRRVEEIKELLKQRRL 482 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 + K+++ + + ++ Y L P S+ NL I P S +++E+++++ Y Sbjct: 483 SLKDVADEQL---KKHVSKDFYHILKDPSISLDNLIKIDPSLSD-SKVILEQVELDVKYE 538 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y RQ K++ E +P DF+Y + LS E +EK S ++P L QAS+I G+ Sbjct: 539 GYINRQKDLIKKLNNLELVKLPFDFNYEIIEGLSREAREKFSKVQPATLAQASRIPGIRN 598 Query: 604 AALNLLLIYIK--KNTVKLN 621 + +L IY KN V LN Sbjct: 599 TDITVLFIYFSNPKNKVVLN 618 >gi|260583255|ref|ZP_05851032.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Haemophilus influenzae NT127] gi|260093708|gb|EEW77619.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Haemophilus influenzae NT127] Length = 629 Score = 573 bits (1477), Expect = e-161, Method: Compositional matrix adjust. Identities = 300/623 (48%), Positives = 394/623 (63%), Gaps = 17/623 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIGGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DA Sbjct: 6 TYDVIVIGGGHAGTEAALAPARMGFKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 + GLM AD AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q E Sbjct: 66 MGGLMAHAADKAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIFQQEA 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E++ ++ + + R +VVLT GTFL G IHIG GR GD S +L + Sbjct: 126 TDILIEQDRVTGVSTKMGLTFRAKSVVLTAGTFLAGKIHIGLENYEGGRAGDPASVNLSH 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 RLKTGTP R+D +TI +D KQ D L FSFM + +QI C IT Sbjct: 186 RLRDLGLRVDRLKTGTPPRIDARTINFDILAKQHGDAVLPVFSFMGSVDDHPQQIPCYIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL ++ Sbjct: 246 HTNEQTHEVIRNNLDRSPMYTGVIEGIGPRYCPSIEDKVMRFSDRNSHQIYLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNGIST+LP ++Q + ++ GLEK I++PGYAIEYDY +P++L PTLETK ISGL Sbjct: 306 EVYPNGISTSLPFDVQMGIVNSMKGLEKARIVKPGYAIEYDYFDPRDLKPTLETKSISGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ + D R SY GV++DDL + G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGINAGLYVQEKDAWYPRRDQSYTGVLVDDLCTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+FTSRAEYR+ LR DNAD RLTPI +LG I E R RF + ++ R L+S+ L Sbjct: 426 YRVFTSRAEYRLLLREDNADIRLTPIAHELGLIDEARWARFNQKMENIEQERQRLRSIWL 485 Query: 484 ---------TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VI 533 +K L S + + + + L P+ + L S+ P + Sbjct: 486 HPRSEYLEEANKVLGSPLV------REASGEDLLRRPEMTYDILTSLTPYKSAIEDREAV 539 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I Y Y Q E ++ K E IP +FDYS + LSNE++ KL +P ++ Sbjct: 540 EQVEIAIKYQGYIEHQQEEIEKQKRHENTAIPANFDYSKVSGLSNEVRAKLEQHRPVSIG 599 Query: 594 QASKIEGMTPAALNLLLIYIKKN 616 QAS+I G+TPAA++++L+ +KK Sbjct: 600 QASRISGITPAAISIILVNLKKQ 622 >gi|167626321|ref|YP_001676821.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|189039342|sp|B0TY78|MNMG_FRAP2 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|167596322|gb|ABZ86320.1| glucose inhibited division protein A [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 627 Score = 573 bits (1477), Expect = e-161, Method: Compositional matrix adjust. Identities = 307/620 (49%), Positives = 410/620 (66%), Gaps = 8/620 (1%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 N +YDVIV+GGGHAG EAAA +A++GA T L+TH TIG MSCNPAIGG+GKGHLV+EI Sbjct: 4 NNTYDVIVVGGGHAGVEAAAASARIGAKTLLLTHNIDTIGQMSCNPAIGGIGKGHLVKEI 63 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DA+ G+M + D AGIQFR+LN +KGPAVR R QADR LY+ A+ + QENLD+ Q Sbjct: 64 DAMGGIMAKAIDMAGIQFRILNSRKGPAVRATRAQADRVLYKKAINSLLNDQENLDIFQD 123 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 V E + + ++ + + + VVLT GTFL G IHIG++ GR GD PSN+L Sbjct: 124 SVDDLVVENDTVCGVITKTGIIFKSKKVVLTVGTFLGGKIHIGQVSKEGGRAGDQPSNAL 183 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITN-RQIEC 240 F RLKTGTP R+D +++ + + Q D FSF + KI + RQI C Sbjct: 184 AARLRALPFRVDRLKTGTPPRIDSRSVDFSVMDVQHGDTPTPYFSFFSKGKIEHPRQIPC 243 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH II N+ SA+YSG I+ GPRYCPSIEDK+VRF E++ HQIF+EPEGL Sbjct: 244 YITYTNSKTHEIITNNLDKSAMYSGLIEGIGPRYCPSIEDKVVRFAEKDRHQIFVEPEGL 303 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 N+ +YPNG+ST+LP E+Q ++IR+I G E I+RPGYAIEYD+ +P++L PTLETK I Sbjct: 304 NSIELYPNGLSTSLPFEVQCEYIRSIKGFENAFIMRPGYAIEYDFFDPRDLKPTLETKHI 363 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 LF AGQINGTTGYEEA AQGLVAGIN+A + +R++SY+GV+IDDL +KG Sbjct: 364 KNLFFAGQINGTTGYEEAGAQGLVAGINAAISIDSDKSWYPTRSNSYMGVLIDDLITKGT 423 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RL+ +LG + ++ Q+ F + +++K+ Sbjct: 424 KEPYRMFTSRAEYRLILREDNADLRLSDKACELGLLNKQDQEIFINKKTAIDENIAIMKN 483 Query: 481 LVLTSKNLSSTSISFKQDGK-TR--TAYEFLSYPDFSIQNLFSICPDA--RKFSSLVIER 535 + + + + D K TR T ++ L P+ + L I PD + VIE+ Sbjct: 484 TWIGPQTQKARDLEKFLDKKMTRESTLFDLLKRPELDYKKLQQI-PDTNLKLEDESVIEQ 542 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I + Y+ Y RQ + +I E + IP+ FDYS + LSNE+ +KLS KP L +A Sbjct: 543 IEISAKYSGYIERQSKDIAKISTLESKTIPESFDYSQVKGLSNEVLQKLSEQKPTTLGEA 602 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G+TPAA++LL IY+KK Sbjct: 603 SRIPGVTPAAVSLLTIYMKK 622 >gi|301169298|emb|CBW28896.1| glucose-inhibited cell-division protein [Haemophilus influenzae 10810] Length = 629 Score = 573 bits (1477), Expect = e-161, Method: Compositional matrix adjust. Identities = 301/623 (48%), Positives = 394/623 (63%), Gaps = 17/623 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIGGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DA Sbjct: 6 TYDVIVIGGGHAGTEAALAPARMGLKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 + GLM AD AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q E Sbjct: 66 MGGLMAHAADKAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIFQQEA 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E++ ++ + + + R +VVLT GTFL G IHIG GR GD S +L Sbjct: 126 TDILIEQDRVTGVSTKMGLIFRAKSVVLTAGTFLAGKIHIGLENYEGGRAGDPASVNLSY 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 RLKTGTP R+D +TI +D KQ D L FSFM + +QI C IT Sbjct: 186 RLRDLGLRVDRLKTGTPPRIDARTINFDILAKQHGDAVLPVFSFMGSVSDHPQQIPCYIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL ++ Sbjct: 246 HTNEQTHEVIRNNLDRSPMYTGVIEGIGPRYCPSIEDKVMRFADRNSHQIYLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNGIST+LP ++Q + ++ GLEK II+PGYAIEYDY +P++L PTLETK ISGL Sbjct: 306 EVYPNGISTSLPFDVQMGIVNSMKGLEKARIIKPGYAIEYDYFDPRDLKPTLETKAISGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ + D R SY GV++DDL + G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGINAGLYVQEKDAWYPRRDQSYTGVLVDDLCTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+FTSRAEYR+ LR DNAD RLTPI +LG I E R RF + ++ R L+S+ L Sbjct: 426 YRVFTSRAEYRLLLREDNADIRLTPIAHELGLIDEARWARFNQKMENIEQERQRLRSIWL 485 Query: 484 ---------TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VI 533 +K L S + + + + L P+ + L S+ P + Sbjct: 486 HPRSEYLEEANKVLGSPLV------REASGEDLLRRPEMTYDILTSLTPYKPAMEDREAV 539 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I Y Y Q E ++ K E IP +FDYS + LSNE++ KL +P ++ Sbjct: 540 EQVEIAIKYQGYIEHQQEEIEKQKRHENTAIPANFDYSKVSGLSNEVRAKLEQHRPVSIG 599 Query: 594 QASKIEGMTPAALNLLLIYIKKN 616 QAS+I G+TPAA++++L+ +KK Sbjct: 600 QASRISGITPAAISIILVNLKKQ 622 >gi|145640560|ref|ZP_01796144.1| glucose-inhibited division protein A [Haemophilus influenzae R3021] gi|145275146|gb|EDK15008.1| glucose-inhibited division protein A [Haemophilus influenzae 22.4-21] Length = 629 Score = 573 bits (1477), Expect = e-161, Method: Compositional matrix adjust. Identities = 300/623 (48%), Positives = 397/623 (63%), Gaps = 17/623 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIGGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DA Sbjct: 6 TYDVIVIGGGHAGTEAALAPARMGFKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 + GLM AD AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q E Sbjct: 66 MGGLMAHAADKAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIFQQEA 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E++ ++ + + + R +VVLT GTFL G IHIG GR GD S +L + Sbjct: 126 TDILIEQDRVTGVSTKMGLIFRAKSVVLTAGTFLAGKIHIGLENYEGGRAGDPASVNLSH 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQIECGIT 243 RLKTGTP R+D +TI +D +KQ D L FSFM + + +QI C IT Sbjct: 186 RLRDLGLRVDRLKTGTPPRIDARTINFDILDKQHGDAVLPVFSFMGSVEDHPQQIPCYIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL ++ Sbjct: 246 HTNEQTHEVIRNNLNRSPMYTGVIEGIGPRYCPSIEDKVMRFSDRNSHQIYLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNGIST+LP ++Q + ++ GLEK II+PGYAIEYDY +P++L PTLETK ISGL Sbjct: 306 EVYPNGISTSLPFDVQMGIVNSMKGLEKARIIKPGYAIEYDYFDPRDLKPTLETKSISGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ + D R SY GV++DDL + G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGINAGLYVQEKDAWYPRRDQSYTGVLVDDLCTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+FTSRAEYR+ LR DNAD RLTPI +LG I + R RF + ++ R L+S+ L Sbjct: 426 YRVFTSRAEYRLLLREDNADIRLTPIAHELGLIDDARWARFNQKMENIEQERQRLRSIWL 485 Query: 484 ---------TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VI 533 +K L S + + + + L P+ + L S+ P + Sbjct: 486 HPRSEYLEEANKVLGSPLV------REASGEDLLRRPEMTYDILTSLTPYQPAMEDREAV 539 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I Y Y Q E ++ K E IP +FDYS + LSNE++ KL +P ++ Sbjct: 540 EQVEIAIKYQGYIEHQQEEIEKQKRHENTAIPANFDYSKVSGLSNEVRAKLEQHRPVSIG 599 Query: 594 QASKIEGMTPAALNLLLIYIKKN 616 QAS+I G+TPAA++++L+ +KK Sbjct: 600 QASRISGITPAAISIILVNLKKQ 622 >gi|331660085|ref|ZP_08361023.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli TA206] gi|331053300|gb|EGI25333.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli TA206] Length = 629 Score = 573 bits (1476), Expect = e-161, Method: Compositional matrix adjust. Identities = 294/616 (47%), Positives = 399/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 EK+ + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVEKDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A + E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKKQ 622 >gi|258545473|ref|ZP_05705707.1| glucose inhibited division protein A [Cardiobacterium hominis ATCC 15826] gi|258519173|gb|EEV88032.1| glucose inhibited division protein A [Cardiobacterium hominis ATCC 15826] Length = 625 Score = 573 bits (1476), Expect = e-161, Method: Compositional matrix adjust. Identities = 297/622 (47%), Positives = 401/622 (64%), Gaps = 10/622 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+V+GGGHAG EAA AA++GA T L+TH TIG MSCNPAIGG+GKGHLV+EIDAL Sbjct: 7 YDVLVVGGGHAGVEAACAAARMGARTLLLTHNIETIGQMSCNPAIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+M R AD AGIQ+R+LN +KGPAVR R QADR LY+ A++ + +Q NLD+ Q V Sbjct: 67 GGIMARAADRAGIQWRILNRRKGPAVRATRAQADRILYKAAVREIVENQPNLDIFQTPVT 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E I+ + Q + VLT GTFL G IH+G GR GD P+N L Sbjct: 127 DLILEGTRIAGVKSQHQIDYYATATVLTAGTFLGGKIHVGLNSFAGGRAGDPPANELAAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 F R+KTGTP RLD +T+ + + E Q D L FS++ + + RQ+ C ITR Sbjct: 187 LHDLPFALARMKTGTPPRLDARTVDYSRMEAQPGDTPLPVFSYLGNAAEHPRQVACHITR 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIK-SYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II I + +Y+G IK ++GPRYCPSIEDK++RF +++ HQIF+EPE L T+ Sbjct: 247 TNERTHDIIRAYIDQAPMYAGVIKDAFGPRYCPSIEDKVMRFADKDSHQIFIEPESLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNG+ST+LP Q +I+TIPGLE+ I RPGYAIEYDY +P+ L +LE++ I L Sbjct: 307 ELYPNGVSTSLPFAAQIAYIQTIPGLEQARITRPGYAIEYDYFDPQHLKHSLESRHIDNL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 +LAGQINGTTGYEEA AQGL+AGIN+AR++ L+ R +Y+GV+IDDL ++G EP Sbjct: 367 YLAGQINGTTGYEEAGAQGLLAGINAARRARDLEPWYPEREQAYLGVLIDDLITQGTREP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R+ LR DNAD RLT IG +LG +GE R + F++ ++ + L+ ++ Sbjct: 427 YRMFTSRAEHRLLLREDNADARLTAIGHELGVVGEPRYRAFSEKMEAIAREQERLRHTLI 486 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICP-DARKFSSLVIERLQIESSY 542 ++L S + A E L P+ L ++ DA VIE++ I + Y Sbjct: 487 RQEHLPGLSQNL-------AASELLKRPEIDYATLAALPGFDAPSLDEAVIEQIDIAAKY 539 Query: 543 AAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMT 602 A Y RQ E ++K +P DY ++ LS E+ EKL ++P NL QA++I G+T Sbjct: 540 AGYIERQQSEVAKLKENRAHRLPVPCDYRAIHGLSAEVAEKLDKIQPENLDQAARIPGVT 599 Query: 603 PAALNLLLIYIKKNTVKLNEIV 624 PAAL++LLI++KK + I Sbjct: 600 PAALSILLIHLKKQKTPPSPIT 621 >gi|224531719|ref|ZP_03672351.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Borrelia valaisiana VS116] gi|224511184|gb|EEF81590.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Borrelia valaisiana VS116] Length = 621 Score = 573 bits (1476), Expect = e-161, Method: Compositional matrix adjust. Identities = 294/620 (47%), Positives = 400/620 (64%), Gaps = 8/620 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++ IVIGGGHAG EAA ++L T +IT TIG +SCNPAIGGL KG++VREIDAL Sbjct: 3 FEAIVIGGGHAGIEAALALSRLNFKTLMITQNLDTIGKLSCNPAIGGLAKGNMVREIDAL 62 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MGR+ D + IQFRVLN +GPAV+ PR QAD+ +Y+ + + Q+NLD+ Q V Sbjct: 63 GGEMGRIIDFSMIQFRVLNKSRGPAVQAPRAQADKLMYQTKAKETLERQDNLDLFQDTVV 122 Query: 126 GF--NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 F N+ +N I +V + + R S VVLTTGTFLRG I IG+ + GR+ + + L Sbjct: 123 DFLLNSMRNEIEGVVTERGNKFRASVVVLTTGTFLRGKIFIGEYRANMGRLAEFSAYGLD 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + F+ GRLKTGTPAR+ K++ + KTE QF D +IPFSF DK+ Q+ C +T Sbjct: 183 KTLRGLGFEMGRLKTGTPARIHKKSVNFSKTEVQFGDSDIIPFSFSNDKLDKSQLSCYVT 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II EN+ S +YSG+I GPRYCPSIEDKI++F +++ HQIF+EPEG NT+ Sbjct: 243 YTNKRTHEIISENMHLSPLYSGEIVGNGPRYCPSIEDKIIKFKDKDRHQIFIEPEGFNTE 302 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y NG+S++LPE IQ + I +I GLE I RPGYA+EYDYINP EL+P LE+K++ GL Sbjct: 303 EMYLNGLSSSLPENIQQKLINSIEGLENAVITRPGYAVEYDYINPIELYPNLESKRVKGL 362 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F+AGQ NG++GYEEAAAQGL+AGIN+A + + +RT SYIGV+IDDL +KG EP Sbjct: 363 FIAGQTNGSSGYEEAAAQGLMAGINAALRLQNKKPMILTRTSSYIGVLIDDLVTKGTKEP 422 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R++LR D +D RL IG LG + E R R+ ++ LLK L Sbjct: 423 YRMFTSRAEHRLNLRHDTSDKRLIKIGYDLGLVDEDRYSRYLFKKSRVEEIKELLKQRRL 482 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 + K++S+ + + ++ Y L P S+ NL I P S +++E+++ + Y Sbjct: 483 SLKDVSNEQL---KKHVSKDFYHILKDPSVSLDNLIKIDPSLND-SKVILEQVEFDVKYE 538 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y RQ K++ E +P DF+Y + LS E +EK S ++P L QAS+I G+ Sbjct: 539 GYINRQKDLIKKLHNLELVKLPFDFNYEVIEGLSKEAREKFSKVQPATLAQASRIPGIRS 598 Query: 604 AALNLLLIYIK--KNTVKLN 621 + +L IY KN V LN Sbjct: 599 TDITVLFIYFSNPKNKVVLN 618 >gi|311281694|ref|YP_003943925.1| glucose inhibited division protein A [Enterobacter cloacae SCF1] gi|308750889|gb|ADO50641.1| glucose inhibited division protein A [Enterobacter cloacae SCF1] Length = 629 Score = 573 bits (1476), Expect = e-161, Method: Compositional matrix adjust. Identities = 295/616 (47%), Positives = 397/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMATAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS SL Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSISLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +TI + +Q D L FSFM + + RQ+ C IT Sbjct: 187 LRELPLRVSRLKTGTPPRIDARTIDFSVLAQQHGDTPLPVFSFMGNAAQHPRQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENARIVRPGYAIEYDFFDPRDLKPTLESKFIHGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + + SR +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARFSAEKEGWAPSRAQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTAMGRELGLVDDARWARFNEKLESIERERQRLKSAWVT 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VIERLQIES 540 ++ ++ + + + L P+ + + L + P A + E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEQLVQLSPFAPGLEDVQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ + E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQQRNENTLLPATLDYRQVTGLSNEVIAKLNDHKPSSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 ITPAAISILLVWLKKQ 622 >gi|110835598|ref|YP_694457.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Alcanivorax borkumensis SK2] gi|122959208|sp|Q0VKW3|MNMG_ALCBS RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|110648709|emb|CAL18185.1| glucose-inhibited division protein A [Alcanivorax borkumensis SK2] Length = 631 Score = 573 bits (1476), Expect = e-161, Method: Compositional matrix adjust. Identities = 298/620 (48%), Positives = 395/620 (63%), Gaps = 6/620 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 ++ + VIVIGGGHAG EAA +A++G ST L+TH T+G MSCNPAIGG+GK HLVRE Sbjct: 3 FSQRFGVIVIGGGHAGTEAALASARMGVSTLLLTHNIETLGQMSCNPAIGGIGKSHLVRE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G MGR D GIQFRVLN +KGPAVR R QADRELY+ A++ + +Q NL + Q Sbjct: 63 IDALGGAMGRATDKGGIQFRVLNARKGPAVRATRAQADRELYKAAIRGTLENQPNLTLFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E +V VVLT GTFL GVIHIG GR GD PSN+ Sbjct: 123 QAVDDLVVENGRCVGVVTNMGLRFMADAVVLTAGTFLGGVIHIGLDNHQGGRAGDQPSNA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN--RQIE 239 L + F RLKTGTP R+DGK++ + E+Q+ D L S++ K+ +Q+ Sbjct: 183 LACRLRELPFRVDRLKTGTPPRIDGKSVDFSVMEEQWGDNPLPVMSYL-GKVEEHPQQVC 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH II S +++G I GPRYCPSIEDK+ R+ +++ HQIF+EPEG Sbjct: 242 CYITHTNAQTHDIIRSGFDRSPMFTGVIDGVGPRYCPSIEDKVNRYPDKDSHQIFVEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 LNT +YPNGIST+LP ++Q Q +R+I G E +I RPGYAIEYDY NP++L +LET+ Sbjct: 302 LNTHELYPNGISTSLPFDVQLQAVRSIRGFENAHITRPGYAIEYDYFNPQDLKHSLETQH 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 + GLF AGQINGTTGYEEA AQGL+AG+N+AR S D R ++YIGV++DDL + G Sbjct: 362 MPGLFFAGQINGTTGYEEAGAQGLLAGLNAARLSQGKDAWTPRRDEAYIGVLVDDLITMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT G +LG +G+ R F LK Sbjct: 422 TQEPYRMFTSRAEYRLLLREDNADLRLTEKGRELGLVGDERWAAFNAKRDGMASEEQRLK 481 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 + + K + +++ + Y + L P+ + NL A + S VIE++ Sbjct: 482 TTWVRPKTPEAEAVNALIEKPLTHEYNLLDLLKRPELTYANLAEAVALADRPDSAVIEQM 541 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I + YA Y RQ E ++++ E +P +FDY + LSNE+K+KLS ++P L QA Sbjct: 542 EILAKYAGYIDRQADEIEKLRAAETTALPVEFDYGQVKGLSNEVKQKLSEIRPQTLGQAG 601 Query: 597 KIEGMTPAALNLLLIYIKKN 616 +I G+TPAA++LL+IY+KK+ Sbjct: 602 RIPGVTPAAISLLMIYLKKH 621 >gi|224585669|ref|YP_002639468.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|254811518|sp|C0Q2P1|MNMG_SALPC RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|224470197|gb|ACN48027.1| glucose-inhibited division protein A [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 629 Score = 573 bits (1476), Expect = e-161, Method: Compositional matrix adjust. Identities = 292/616 (47%), Positives = 394/616 (63%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMTAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVSRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIHGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEMGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 S+ ++ + + + L P+ + L S+ A E+++I+ Sbjct: 487 PSAESADEVNAHLTTPLSREASGEDLLRRPEMTYAQLTSLAAFAPALEDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKKQ 622 >gi|218249586|ref|YP_002374706.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Borrelia burgdorferi ZS7] gi|223889242|ref|ZP_03623830.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Borrelia burgdorferi 64b] gi|226321496|ref|ZP_03797022.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Borrelia burgdorferi Bol26] gi|1707903|sp|P53362|MNMG_BORBU RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|226704791|sp|B7J1B1|MNMG_BORBZ RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|1200212|emb|CAA78149.1| gidA [Borrelia burgdorferi] gi|2689170|emb|CAA06005.1| glucose inhibited division protein A [Borrelia burgdorferi] gi|218164774|gb|ACK74835.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Borrelia burgdorferi ZS7] gi|223885275|gb|EEF56377.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Borrelia burgdorferi 64b] gi|226232685|gb|EEH31438.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Borrelia burgdorferi Bol26] Length = 621 Score = 573 bits (1476), Expect = e-161, Method: Compositional matrix adjust. Identities = 294/620 (47%), Positives = 401/620 (64%), Gaps = 8/620 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D IVIGGGHAG EAA ++L T +IT TIG +SCNPAIGGL KG++VREIDAL Sbjct: 3 FDAIVIGGGHAGIEAALALSRLNFKTLMITQNLDTIGKLSCNPAIGGLAKGNMVREIDAL 62 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MGR+ D + IQFRVLN +GPAV+ PR QAD+ +Y+ + + Q+NLD+ Q V Sbjct: 63 GGEMGRIIDFSMIQFRVLNKSRGPAVQAPRAQADKLMYQTKAKETLERQDNLDLFQDTVV 122 Query: 126 GF--NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 F N+ +N I +V + + R S VVLTTGTFLRG I IG+ + GR+ + + L Sbjct: 123 DFLLNSMRNEIEGVVTERGNKFRSSVVVLTTGTFLRGKIFIGEYRADMGRLAEFSAYGLD 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + + F+ GRLKTGTPAR+ K++ + KTE QF D +IPFSF K+ Q+ C +T Sbjct: 183 KTLLGLGFEMGRLKTGTPARIHKKSVDFSKTEVQFGDSDIIPFSFSNGKLDKSQLSCYVT 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH II EN+ S +YSG+I GPRYCPSIEDKIV+F +++ HQIF+EPEG NT+ Sbjct: 243 YTNKKTHEIISENMHLSPLYSGEIVGNGPRYCPSIEDKIVKFKDKDRHQIFIEPEGFNTE 302 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y NG+S++LPE IQ + I +I GLE I RPGYA+EYDYINP EL+P LE+K++ GL Sbjct: 303 EMYLNGLSSSLPENIQQKLINSIEGLEHAVITRPGYAVEYDYINPIELYPNLESKRVKGL 362 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F+AGQ NG++GYEEAAAQGL+AGIN+A + + +RT SYIGV+IDDL +KG EP Sbjct: 363 FIAGQTNGSSGYEEAAAQGLMAGINAALRLQNKKPMILTRTSSYIGVLIDDLVTKGTKEP 422 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R++LR D +D RL IG LG + E+R R+ ++ LLK L Sbjct: 423 YRMFTSRAEHRLNLRHDTSDKRLIKIGYDLGLVDEKRYSRYLFKESRVEEIKELLKQRRL 482 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 + K++ + + ++ Y L P S+ NL I P S +++E+++++ Y Sbjct: 483 SLKDVVDEQL---KKHVSKDFYHILKDPSISLDNLIKIDPSLSD-SKVILEQVELDVKYE 538 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y RQ K + E +P DF+Y + LS E +EK S ++P L QAS+I G+ Sbjct: 539 GYINRQKDLIKRLDNLELVKLPFDFNYEIIEGLSREAREKFSKIQPATLAQASRIPGIRS 598 Query: 604 AALNLLLIYIK--KNTVKLN 621 + +LLIY KN V +N Sbjct: 599 TDITVLLIYFSNPKNKVVIN 618 >gi|148827804|ref|YP_001292557.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Haemophilus influenzae PittGG] gi|166222938|sp|A5UHB8|MNMG_HAEIG RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|148719046|gb|ABR00174.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Haemophilus influenzae PittGG] Length = 629 Score = 573 bits (1476), Expect = e-161, Method: Compositional matrix adjust. Identities = 299/622 (48%), Positives = 395/622 (63%), Gaps = 17/622 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIGGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DA Sbjct: 6 TYDVIVIGGGHAGTEAALAPARMGFKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 + GLM AD AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q E Sbjct: 66 MGGLMAHAADKAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIFQQEA 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E++ ++ + + + R +VVLT GTFL G IHIG GR GD S +L + Sbjct: 126 TDILIEQDRVTGVSTKMGLIFRAKSVVLTAGTFLAGKIHIGLENYEGGRAGDPASVNLSH 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 RLKTGTP R+D +TI +D KQ DE L FSFM + +QI C IT Sbjct: 186 RLRDLGLRVNRLKTGTPPRIDARTINFDILAKQHGDEVLPVFSFMGSVDDHPQQIPCYIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL ++ Sbjct: 246 HTNEQTHEVIRNNLDRSPMYTGVIEGIGPRYCPSIEDKVMRFSDRNSHQIYLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNGIST+LP ++Q + ++ GLE I++PGYAIEYDY +P++L PTLETK ISGL Sbjct: 306 EVYPNGISTSLPFDVQMGIVNSMKGLENARIVKPGYAIEYDYFDPRDLKPTLETKSISGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ + D R SY GV++DDL + G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGINAGLYVQEKDAWYPRRDQSYTGVLVDDLCTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+FTSRAEYR+ LR DNAD RLTPI +LG I E R RF + ++ R L+S+ L Sbjct: 426 YRVFTSRAEYRLLLREDNADIRLTPIAHELGLIDEARWARFNQKMENIEQERQRLRSIWL 485 Query: 484 ---------TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VI 533 +K L S + + + + L P+ + L S+ P + Sbjct: 486 HPRSEYLEEANKVLGSPLV------REASGEDLLRRPEMTYDILTSLTPYKPAMEDKEAV 539 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I Y Y Q E ++ K E IP +FDY+ + LSNE++ KL +P ++ Sbjct: 540 EQVEIAIKYQGYIEHQQEEIEKQKRHENTAIPANFDYNKVSGLSNEVRAKLEQHRPVSIG 599 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I G+TPAA++++L+ +KK Sbjct: 600 QASRISGITPAAISIILVNLKK 621 >gi|225552148|ref|ZP_03773088.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Borrelia sp. SV1] gi|225371146|gb|EEH00576.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Borrelia sp. SV1] Length = 621 Score = 572 bits (1475), Expect = e-161, Method: Compositional matrix adjust. Identities = 294/620 (47%), Positives = 401/620 (64%), Gaps = 8/620 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D IVIGGGHAG EAA ++L T +IT TIG +SCNPAIGGL KG++VREIDAL Sbjct: 3 FDAIVIGGGHAGIEAALALSRLNFKTLMITQNLDTIGKLSCNPAIGGLAKGNMVREIDAL 62 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MGR+ D + IQFRVLN +GPAV+ PR QAD+ +Y+ + + Q+NLD+ Q V Sbjct: 63 GGEMGRIIDFSMIQFRVLNKSRGPAVQAPRAQADKLMYQTKAKETLERQDNLDLFQDTVV 122 Query: 126 GF--NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 F N+ +N I +V + + R S VVLTTGTFLRG I IG+ + GR+ + + L Sbjct: 123 DFLLNSMRNEIEGVVTERGNKFRSSVVVLTTGTFLRGKIFIGEYRADMGRLAEFSAYGLD 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + + F+ GRLKTGTPAR+ K++ + KTE QF D +IPFSF K+ Q+ C +T Sbjct: 183 KTLLGLGFEMGRLKTGTPARIHKKSVDFSKTEVQFGDSDIIPFSFSNGKLDKSQLSCYVT 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH II EN+ S +YSG+I GPRYCPSIEDKIV+F +++ HQIF+EPEG NT+ Sbjct: 243 YTNKKTHEIISENMHLSPLYSGEIVGNGPRYCPSIEDKIVKFKDKDRHQIFIEPEGFNTE 302 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y NG+S++LPE IQ + I +I GLE I RPGYA+EYDYINP EL+P LE+K++ GL Sbjct: 303 EMYLNGLSSSLPENIQQKLINSIEGLEHAVITRPGYAVEYDYINPIELYPNLESKRVKGL 362 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F+AGQ NG++GYEEAAAQGL+AGIN+A + + +RT SYIGV+IDDL +KG EP Sbjct: 363 FIAGQTNGSSGYEEAAAQGLMAGINAALRLQNKKPMILTRTSSYIGVLIDDLVTKGTKEP 422 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R++LR D +D RL IG LG + E+R R+ ++ LLK L Sbjct: 423 YRMFTSRAEHRLNLRHDTSDKRLIKIGYDLGLVDEKRYSRYLFKESRVEEIKELLKQRRL 482 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 + K++ + + ++ Y L P S+ NL I P S +++E+++++ Y Sbjct: 483 SLKDVVDEQL---KKHVSKDFYHILKDPSISLDNLIKIDPSLGD-SKVILEQVELDVKYE 538 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y RQ K + E +P DF+Y + LS E +EK S ++P L QAS+I G+ Sbjct: 539 GYINRQKDLIKRLDNLELVKLPFDFNYEIVEGLSREAREKFSKIQPATLAQASRIPGIRS 598 Query: 604 AALNLLLIYIK--KNTVKLN 621 + +LLIY KN V +N Sbjct: 599 TDITVLLIYFSNPKNKVVIN 618 >gi|319775496|ref|YP_004137984.1| glucose-inhibited cell-division protein [Haemophilus influenzae F3047] gi|329122463|ref|ZP_08251049.1| glucose inhibited division protein A [Haemophilus aegyptius ATCC 11116] gi|317450087|emb|CBY86301.1| glucose-inhibited cell-division protein [Haemophilus influenzae F3047] gi|327473217|gb|EGF18638.1| glucose inhibited division protein A [Haemophilus aegyptius ATCC 11116] Length = 629 Score = 572 bits (1475), Expect = e-161, Method: Compositional matrix adjust. Identities = 299/623 (47%), Positives = 394/623 (63%), Gaps = 17/623 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIGGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DA Sbjct: 6 TYDVIVIGGGHAGTEAALAPARMGFKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 + GLM AD AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q E Sbjct: 66 MGGLMAHAADKAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIFQQEA 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E++ ++ + + R +V+LT GTFL G IHIG GR GD S +L + Sbjct: 126 TDILIEQDRVTGVSTKMGLTFRAKSVILTAGTFLAGKIHIGLENYEGGRAGDPASVNLSH 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 RLKTGTP R+D +TI +D KQ DE L FSFM + +QI C IT Sbjct: 186 RLRDLGLRVDRLKTGTPPRIDARTINFDILTKQHGDEVLPMFSFMGSVDDHPQQIPCYIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL ++ Sbjct: 246 HTNEQTHEVIRNNLDRSPMYTGMIEGIGPRYCPSIEDKVMRFSDRNSHQIYLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNGIST+LP ++Q + ++ GLE I++PGYAIEYDY +P++L PTLETK ISGL Sbjct: 306 EVYPNGISTSLPFDVQMGIVNSMKGLENARIVKPGYAIEYDYFDPRDLKPTLETKSISGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ + D R SY GV++DDL + G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGINAGLYVQEKDAWYPRRDQSYTGVLVDDLCTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+FTSRAEYR+ LR DNAD RLTPI +LG I E R RF + ++ R L+S+ L Sbjct: 426 YRVFTSRAEYRLLLREDNADIRLTPIAHELGLIDEARWARFNQKMENIEQERQRLRSIWL 485 Query: 484 ---------TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VI 533 +K L S + + + + L P+ + L S+ P + Sbjct: 486 HPRSEYLEEANKVLGSPLV------REASGEDLLRRPEMTYDILTSLTPYKPAMEDKEAV 539 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I Y Y Q E ++ K E IP +FDYS + LSNE++ KL +P ++ Sbjct: 540 EQVEIAIKYQGYIEHQQEEIEKQKRHENTAIPANFDYSKVSGLSNEVRAKLEQHRPVSIG 599 Query: 594 QASKIEGMTPAALNLLLIYIKKN 616 QAS+I G+TPAA++++L+ +KK Sbjct: 600 QASRISGITPAAISIILVNLKKQ 622 >gi|91213268|ref|YP_543254.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli UTI89] gi|117626012|ref|YP_859335.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli APEC O1] gi|218560816|ref|YP_002393729.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli S88] gi|237703542|ref|ZP_04534023.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Escherichia sp. 3_2_53FAA] gi|122421808|sp|Q1R4J1|MNMG_ECOUT RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|166222932|sp|A1AHS1|MNMG_ECOK1 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|226704792|sp|B7MGG1|MNMG_ECO45 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|91074842|gb|ABE09723.1| glucose-inhibited division protein A [Escherichia coli UTI89] gi|115515136|gb|ABJ03211.1| glucose-inhibited division protein A [Escherichia coli APEC O1] gi|218367585|emb|CAR05369.1| glucose-inhibited cell-division protein [Escherichia coli S88] gi|226902806|gb|EEH89065.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Escherichia sp. 3_2_53FAA] gi|294493839|gb|ADE92595.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli IHE3034] gi|307628815|gb|ADN73119.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli UM146] gi|315285542|gb|EFU44984.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 110-3] gi|323949984|gb|EGB45868.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli H252] gi|323954964|gb|EGB50742.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli H263] Length = 629 Score = 572 bits (1475), Expect = e-161, Method: Compositional matrix adjust. Identities = 294/616 (47%), Positives = 398/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ERN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFAERNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A + E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKKQ 622 >gi|15804341|ref|NP_290380.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O157:H7 EDL933] gi|15833937|ref|NP_312710.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O157:H7 str. Sakai] gi|168753643|ref|ZP_02778650.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O157:H7 str. EC4401] gi|168786584|ref|ZP_02811591.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O157:H7 str. EC869] gi|195936368|ref|ZP_03081750.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O157:H7 str. EC4024] gi|208807342|ref|ZP_03249679.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O157:H7 str. EC4206] gi|208814423|ref|ZP_03255752.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O157:H7 str. EC4045] gi|209400287|ref|YP_002273269.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O157:H7 str. EC4115] gi|217326532|ref|ZP_03442616.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O157:H7 str. TW14588] gi|254795747|ref|YP_003080584.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O157:H7 str. TW14359] gi|261225898|ref|ZP_05940179.1| glucose-inhibited cell-division protein [Escherichia coli O157:H7 str. FRIK2000] gi|261258943|ref|ZP_05951476.1| glucose-inhibited cell-division protein [Escherichia coli O157:H7 str. FRIK966] gi|291285165|ref|YP_003501983.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Escherichia coli O55:H7 str. CB9615] gi|21263660|sp|Q8XAY0|MNMG_ECO57 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|238058367|sp|B5YXE5|MNMG_ECO5E RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|12518598|gb|AAG58944.1|AE005605_12 glucose-inhibited division; chromosome replication [Escherichia coli O157:H7 str. EDL933] gi|13364158|dbj|BAB38106.1| glucose-inhibited division protein GidA [Escherichia coli O157:H7 str. Sakai] gi|189358928|gb|EDU77347.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O157:H7 str. EC4401] gi|189373258|gb|EDU91674.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O157:H7 str. EC869] gi|208727143|gb|EDZ76744.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O157:H7 str. EC4206] gi|208735700|gb|EDZ84387.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O157:H7 str. EC4045] gi|209161687|gb|ACI39120.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O157:H7 str. EC4115] gi|209753798|gb|ACI75206.1| MioC protein [Escherichia coli] gi|209753800|gb|ACI75207.1| MioC protein [Escherichia coli] gi|209753802|gb|ACI75208.1| MioC protein [Escherichia coli] gi|209753804|gb|ACI75209.1| MioC protein [Escherichia coli] gi|209753806|gb|ACI75210.1| MioC protein [Escherichia coli] gi|217322753|gb|EEC31177.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O157:H7 str. TW14588] gi|254595147|gb|ACT74508.1| glucose-inhibited cell-division protein [Escherichia coli O157:H7 str. TW14359] gi|290765038|gb|ADD58999.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Escherichia coli O55:H7 str. CB9615] gi|320191155|gb|EFW65805.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O157:H7 str. EC1212] gi|320639469|gb|EFX09084.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O157:H7 str. G5101] gi|320644909|gb|EFX13945.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O157:H- str. 493-89] gi|320650175|gb|EFX18671.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O157:H- str. H 2687] gi|320655524|gb|EFX23459.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661147|gb|EFX28583.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O55:H7 str. USDA 5905] gi|320666276|gb|EFX33282.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O157:H7 str. LSU-61] gi|326341577|gb|EGD65366.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O157:H7 str. 1125] Length = 629 Score = 572 bits (1475), Expect = e-161, Method: Compositional matrix adjust. Identities = 293/616 (47%), Positives = 399/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S+ + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSDDKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A + E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKKQ 622 >gi|332289277|ref|YP_004420129.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Gallibacterium anatis UMN179] gi|330432173|gb|AEC17232.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Gallibacterium anatis UMN179] Length = 629 Score = 572 bits (1474), Expect = e-161, Method: Compositional matrix adjust. Identities = 293/617 (47%), Positives = 390/617 (63%), Gaps = 5/617 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDVIV+GGGHAG EAA A++G T LITH T+G MSCNPAIGG+GKGHLV+EIDA Sbjct: 6 QYDVIVVGGGHAGTEAALAPARMGLKTLLITHNIDTLGQMSCNPAIGGIGKGHLVKEIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLM D AGIQFR LN KGPAVR R QADR LYR A++ + Q NLD+ Q EV Sbjct: 66 LGGLMAHATDQAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALEKQPNLDLFQQEV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E +S + + + VVLT GTFL G IHIG GR GD S L Sbjct: 126 TDILIENGHVSGVSTKMGLTFKAKAVVLTAGTFLAGKIHIGLDHYEGGRAGDPASVRLAE 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 D RLKTGTP RLD +TI + ++Q DE L FS+M + +Q+ C IT Sbjct: 186 RLRDLDLRVARLKTGTPPRLDARTIDFSVLKQQHGDEILPVFSYMGSVDEHPQQVPCYIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TNL+TH II N+ S +Y+G I+ GPRYCPSIEDK++RFG+RNGHQIFLEPEGL ++ Sbjct: 246 HTNLKTHDIIRANLDRSPMYTGIIEGVGPRYCPSIEDKVMRFGDRNGHQIFLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q + ++ GLE I++PGYAIEYD+ +P++L P+LETK I+GL Sbjct: 306 EIYPNGISTSLPFDVQMGIVNSMQGLENARIVKPGYAIEYDFFDPRDLKPSLETKSINGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQG++AG+N+ + R +YIGV++DDL + G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGILAGLNAGLHVQDKEAWYPRRDQAYIGVLVDDLCTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+FTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R L+ + + Sbjct: 426 YRVFTSRAEYRLLLREDNADLRLTAIGRELGLVDDARWARFNQKLENIELERQRLRQIWI 485 Query: 484 TSKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VIERLQIE 539 ++ ++ + + + L P+ + L + P +E+++I Sbjct: 486 HPRSEYLDEVNAVLNSPLMREANGEDLLRRPEMDYEKLCQLTPFQPAMQDKEAVEQVEIS 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y Q E + K E LIP +FDYS++ LSNE++ KL +P ++ QAS+I Sbjct: 546 IKYQGYIEHQNEEIERHKRHENTLIPAEFDYSAVVGLSNEVRSKLEQHRPVSIGQASRIS 605 Query: 600 GMTPAALNLLLIYIKKN 616 G+TPAA+++LL+Y+KK Sbjct: 606 GITPAAISILLVYLKKQ 622 >gi|195941909|ref|ZP_03087291.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Borrelia burgdorferi 80a] Length = 621 Score = 572 bits (1474), Expect = e-161, Method: Compositional matrix adjust. Identities = 294/620 (47%), Positives = 400/620 (64%), Gaps = 8/620 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D IVIGGGHAG EAA ++L T +IT TIG +SCNPAIGGL KG++VREIDAL Sbjct: 3 FDAIVIGGGHAGIEAALALSRLNFKTLMITQNLDTIGKLSCNPAIGGLAKGNMVREIDAL 62 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MGR+ D + IQFRVLN +GPAV+ PR QAD+ +Y+ + + Q+NLD+ Q V Sbjct: 63 GGEMGRIIDFSMIQFRVLNKSRGPAVQAPRAQADKLMYQTKAKETLERQDNLDLFQDTVV 122 Query: 126 GF--NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 F N+ +N I +V + + R S VVLTTGTFLRG I IG+ + GR+ + + L Sbjct: 123 DFLLNSMRNEIKGVVTERGNKFRSSVVVLTTGTFLRGKIFIGEYRADMGRLAEFSAYGLD 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + + F+ GRLKTGTPAR+ K++ + KTE QF D +IPFSF K+ Q+ C +T Sbjct: 183 KTLLGLGFEMGRLKTGTPARIHKKSVDFSKTEVQFGDSDIIPFSFSNGKLDKSQLSCYVT 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH II EN+ S +YSG+I GPRYCPSIEDKIV+F +++ HQIF+EPEG NT+ Sbjct: 243 YTNKKTHEIISENMHLSPLYSGEIVGNGPRYCPSIEDKIVKFKDKDRHQIFIEPEGFNTE 302 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y NG+S++LPE IQ + I +I GLE I RPGYA+EYDYINP EL+P LE+K++ GL Sbjct: 303 EMYLNGLSSSLPENIQQKLINSIEGLEHAVITRPGYAVEYDYINPIELYPNLESKRVKGL 362 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F+AGQ NG++GYEEAAAQGL+AGIN+A + + +RT SYIGV+IDDL +KG EP Sbjct: 363 FIAGQTNGSSGYEEAAAQGLMAGINAALRLQNKKPMILTRTSSYIGVLIDDLVTKGTKEP 422 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R++LR D +D RL IG LG + E R R+ ++ LLK L Sbjct: 423 YRMFTSRAEHRLNLRHDTSDKRLIKIGYDLGLVDEERYSRYLFKESRVEEIKELLKQRRL 482 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 + K++ + + ++ Y L P S+ NL I P S +++E+++++ Y Sbjct: 483 SLKDVVDEQL---KKHVSKDFYHILKDPSISLDNLIKIDPSLND-SKVILEQVELDVKYE 538 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y RQ K + E +P DF+Y + LS E +EK S ++P L QAS+I G+ Sbjct: 539 GYINRQKDLIKRLDNLELVKLPFDFNYEIIEGLSREAREKFSKVQPATLAQASRIPGIRS 598 Query: 604 AALNLLLIYIK--KNTVKLN 621 + +LLIY KN V +N Sbjct: 599 TDITVLLIYFSNPKNKVVIN 618 >gi|145633461|ref|ZP_01789190.1| glucose-inhibited division protein A [Haemophilus influenzae 3655] gi|144985830|gb|EDJ92438.1| glucose-inhibited division protein A [Haemophilus influenzae 3655] Length = 629 Score = 572 bits (1474), Expect = e-161, Method: Compositional matrix adjust. Identities = 300/623 (48%), Positives = 394/623 (63%), Gaps = 17/623 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIGGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DA Sbjct: 6 TYDVIVIGGGHAGTEAALAPARMGLKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 + GLM AD AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q E Sbjct: 66 MGGLMAHAADKAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIFQQEA 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E++ ++ + + + R +VVLT GTFL G IHIG GR GD S +L Sbjct: 126 TDILIEQDRVTGVSTKMGLIFRAKSVVLTAGTFLAGKIHIGLENYEGGRAGDPASVNLSY 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 RLKTGTP R+D +TI +D KQ D L FSFM + +QI C IT Sbjct: 186 RLRDLGLRVDRLKTGTPPRIDARTINFDILAKQHGDAVLPVFSFMGSVSDHPQQIPCYIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL ++ Sbjct: 246 HTNEQTHEVIRNNLDRSPMYTGVIEGVGPRYCPSIEDKVMRFADRNSHQIYLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNGIST+LP ++Q + ++ GLEK II+PGYAIEYDY +P++L PTLETK ISGL Sbjct: 306 EVYPNGISTSLPFDVQMGIVNSMKGLEKARIIKPGYAIEYDYFDPRDLKPTLETKAISGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ + + R SY GV++DDL + G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGINAGLYVQEKEAWYPRRDQSYTGVLVDDLCTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+FTSRAEYR+ LR DNAD RLTPI +LG I E R RF + ++ R L+S+ L Sbjct: 426 YRVFTSRAEYRLLLREDNADIRLTPIAHELGLIDEARWARFNQKMENIELERQRLRSIWL 485 Query: 484 ---------TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VI 533 +K L S + + + + L P+ + L S+ P + Sbjct: 486 HPRSEYLEEANKVLGSPLV------REASGEDLLRRPEMTYDILTSLTPYKPAIEDREAV 539 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I Y Y Q E ++ K E IP +FDYS + LSNE++ KL +P ++ Sbjct: 540 EQVEIAIKYQGYIEHQQEEIEKQKRHENTAIPANFDYSKVSGLSNEVRAKLEQHRPVSIG 599 Query: 594 QASKIEGMTPAALNLLLIYIKKN 616 QAS+I G+TPAA++++L+ +KK Sbjct: 600 QASRISGITPAAISIILVNLKKQ 622 >gi|215489079|ref|YP_002331510.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O127:H6 str. E2348/69] gi|312967849|ref|ZP_07782061.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli 2362-75] gi|254811510|sp|B7UMK6|MNMG_ECO27 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|215267151|emb|CAS11599.1| glucose-inhibited cell-division protein [Escherichia coli O127:H6 str. E2348/69] gi|312287410|gb|EFR15318.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli 2362-75] Length = 629 Score = 572 bits (1474), Expect = e-161, Method: Compositional matrix adjust. Identities = 294/616 (47%), Positives = 398/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 ++ ++ + + + L P+ + + L S+ P A + E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTSLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKKQ 622 >gi|326340511|gb|EGD64310.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O157:H7 str. 1044] Length = 629 Score = 572 bits (1474), Expect = e-161, Method: Compositional matrix adjust. Identities = 293/616 (47%), Positives = 399/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYRGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S+ + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSDDKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A + E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKKQ 622 >gi|216264667|ref|ZP_03436659.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Borrelia burgdorferi 156a] gi|224532820|ref|ZP_03673435.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Borrelia burgdorferi WI91-23] gi|224534095|ref|ZP_03674678.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Borrelia burgdorferi CA-11.2a] gi|215981140|gb|EEC21947.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Borrelia burgdorferi 156a] gi|224512209|gb|EEF82595.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Borrelia burgdorferi WI91-23] gi|224512794|gb|EEF83162.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Borrelia burgdorferi CA-11.2a] gi|312148349|gb|ADQ31008.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Borrelia burgdorferi JD1] Length = 621 Score = 572 bits (1474), Expect = e-161, Method: Compositional matrix adjust. Identities = 294/620 (47%), Positives = 400/620 (64%), Gaps = 8/620 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D IVIGGGHAG EAA ++L T +IT TIG +SCNPAIGGL KG++VREIDAL Sbjct: 3 FDAIVIGGGHAGIEAALALSRLNFKTLMITQNLDTIGKLSCNPAIGGLAKGNMVREIDAL 62 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MGR+ D + IQFRVLN +GPAV+ PR QAD+ +Y+ + + Q+NLD+ Q V Sbjct: 63 GGEMGRIIDFSMIQFRVLNKSRGPAVQAPRAQADKLMYQTKAKETLERQDNLDLFQDTVV 122 Query: 126 GF--NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 F N+ +N I +V + + R S VVLTTGTFLRG I IG+ + GR+ + + L Sbjct: 123 DFLLNSMRNEIEGVVTERGNKFRSSVVVLTTGTFLRGKIFIGEYRADMGRLAEFSAYGLD 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + + F+ GRLKTGTPAR+ K++ + KTE QF D +IPFSF K+ Q+ C +T Sbjct: 183 KTLLGLGFEMGRLKTGTPARIHKKSVDFSKTEVQFGDSDIIPFSFSNGKLDKSQLSCYVT 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH II EN+ S +YSG+I GPRYCPSIEDKIV+F +++ HQIF+EPEG NT+ Sbjct: 243 YTNKKTHEIISENMHLSPLYSGEIVGNGPRYCPSIEDKIVKFKDKDRHQIFIEPEGFNTE 302 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y NG+S++LPE IQ + I +I GLE I RPGYA+EYDYINP EL+P LE+K++ GL Sbjct: 303 EMYLNGLSSSLPENIQQKLINSIEGLEHAVITRPGYAVEYDYINPIELYPNLESKRVKGL 362 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F+AGQ NG++GYEEAAAQGL+AGIN+A + + +RT SYIGV+IDDL +KG EP Sbjct: 363 FIAGQTNGSSGYEEAAAQGLMAGINAALRLQNKKPMILTRTSSYIGVLIDDLVTKGTKEP 422 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R++LR D +D RL IG LG + E R R+ ++ LLK L Sbjct: 423 YRMFTSRAEHRLNLRHDTSDKRLIKIGYDLGLVDEERYSRYLFKESRVEEIKELLKQRRL 482 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 + K++ + + ++ Y L P S+ NL I P S +++E+++++ Y Sbjct: 483 SLKDVVDEQL---KKHVSKDFYHILKDPSISLDNLIKIDPSLSD-SKVILEQVELDVKYE 538 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y RQ K + E +P DF+Y + LS E +EK S ++P L QAS+I G+ Sbjct: 539 GYINRQKDLIKRLDNLELVKLPFDFNYEIVEGLSREAREKFSKIQPATLAQASRIPGIRS 598 Query: 604 AALNLLLIYIK--KNTVKLN 621 + +LLIY KN V +N Sbjct: 599 TDITVLLIYFSNPKNKVVIN 618 >gi|319897901|ref|YP_004136098.1| glucose-inhibited cell-division protein [Haemophilus influenzae F3031] gi|317433407|emb|CBY81788.1| glucose-inhibited cell-division protein [Haemophilus influenzae F3031] Length = 629 Score = 572 bits (1474), Expect = e-161, Method: Compositional matrix adjust. Identities = 299/623 (47%), Positives = 395/623 (63%), Gaps = 17/623 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIGGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DA Sbjct: 6 TYDVIVIGGGHAGTEAALAPARMGFKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 + GLM AD AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q E Sbjct: 66 MGGLMAHAADKAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIFQQEA 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E++ ++ + + + R +VVLT GTFL G IHIG GR GD S +L + Sbjct: 126 TDILIEQDRVTGVSTKMGLIFRAKSVVLTAGTFLAGKIHIGLENYEGGRAGDPASVNLSH 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 RLKTGTP R+D +TI +D KQ D L FSFM + +QI C IT Sbjct: 186 RLRDLGLRVDRLKTGTPPRIDARTINFDILAKQHGDAVLPVFSFMGSVDDHPQQIPCYIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL ++ Sbjct: 246 HTNEQTHEVIRNNLDRSPMYTGVIEGIGPRYCPSIEDKVMRFSDRNSHQIYLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNGIST+LP ++Q + ++ GLEK I++PGYAIEYDY +P++L PTLETK ISGL Sbjct: 306 EVYPNGISTSLPFDVQMGIVNSMKGLEKARIVKPGYAIEYDYFDPRDLKPTLETKSISGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ + D R SY GV++DDL + G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGINAGLYVQEKDAWYPRRDQSYTGVLVDDLCTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+FTSRAEYR+ LR DNAD RLTPI +LG I E R RF + ++ R L+++ L Sbjct: 426 YRVFTSRAEYRLLLREDNADIRLTPIAHELGLIDEARWARFNQKMENIEQERQRLRNIWL 485 Query: 484 ---------TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VI 533 +K L S + + + + L P+ + L S+ P + Sbjct: 486 HPRSEYLEEANKVLGSPLV------REASGEDLLRRPEMTYDILTSLTPYKPAMEDREAV 539 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I Y Y Q E ++ K E IP +FDYS + LSNE++ KL +P ++ Sbjct: 540 EQVEIAIKYQGYIEHQQEEIEKQKRHENTAIPANFDYSKVSGLSNEVRAKLEQHRPVSIG 599 Query: 594 QASKIEGMTPAALNLLLIYIKKN 616 QAS+I G+TPAA++++L+ +KK Sbjct: 600 QASRISGITPAAISIILVNLKKQ 622 >gi|145637945|ref|ZP_01793586.1| glucose-inhibited division protein A [Haemophilus influenzae PittHH] gi|145268859|gb|EDK08821.1| glucose-inhibited division protein A [Haemophilus influenzae PittHH] Length = 629 Score = 572 bits (1473), Expect = e-161, Method: Compositional matrix adjust. Identities = 300/623 (48%), Positives = 397/623 (63%), Gaps = 17/623 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIGGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DA Sbjct: 6 TYDVIVIGGGHAGTEAALAPARMGFKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 + GLM AD AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q E Sbjct: 66 MGGLMAHAADKAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIFQQEA 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E++ ++ + + + R +VVLT GTFL G IHIG GR GD S +L + Sbjct: 126 IDILIEQDRVTGVSTKMGLIFRAKSVVLTAGTFLAGKIHIGLENYEGGRAGDPASVNLSH 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQIECGIT 243 RLKTGTP R+D +TI +D KQ DE L FSFM + + +QI C IT Sbjct: 186 RLRDLGLRVDRLKTGTPPRIDARTINFDILTKQHGDEVLPVFSFMGSVEDHPQQIPCYIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL ++ Sbjct: 246 HTNEQTHEVIRNNLDRSPMYTGVIEGIGPRYCPSIEDKVMRFADRNSHQIYLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNGIST+LP ++Q + ++ GLEK II+PGYAIEYDY +P++L PTLETK ISGL Sbjct: 306 EVYPNGISTSLPFDVQMGIVNSMKGLEKARIIKPGYAIEYDYFDPRDLKPTLETKSISGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ + + R SY GV++DDL + G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGINAGLYVQEKEAWYPRRDQSYTGVLVDDLCTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+FTSRAEYR+ LR DNAD RLTPI +LG I + R RF K ++ R L+++ L Sbjct: 426 YRVFTSRAEYRLLLREDNADIRLTPIAHELGLIDDARWARFNKKMENIEQERQRLRNIWL 485 Query: 484 ---------TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VI 533 +K L S + + + + L P+ + L S+ P + Sbjct: 486 HPRSEYLEEANKVLGSPLV------REASGEDLLRRPEMTYDILTSLTPYKPAMEDKEAV 539 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I Y Y Q E ++ K E IP +FDYS + LSNE++ KL +P ++ Sbjct: 540 EQVEIAIKYQGYIEHQQEEIEKQKRHENTAIPANFDYSKVSGLSNEVRAKLEQHRPVSIG 599 Query: 594 QASKIEGMTPAALNLLLIYIKKN 616 QAS+I G+TPAA++++L+ +KK Sbjct: 600 QASRISGITPAAISIILVNLKKQ 622 >gi|323965809|gb|EGB61260.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli M863] gi|327250893|gb|EGE62595.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli STEC_7v] Length = 629 Score = 572 bits (1473), Expect = e-161, Method: Compositional matrix adjust. Identities = 293/616 (47%), Positives = 398/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 ++ ++ + + + L P+ + + L + P A + E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTMLAPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ + E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQQRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKKQ 622 >gi|224510581|pdb|3CES|A Chain A, Crystal Structure Of E.Coli Mnmg (Gida), A Highly-Conserved Trna Modifying Enzyme gi|224510582|pdb|3CES|B Chain B, Crystal Structure Of E.Coli Mnmg (Gida), A Highly-Conserved Trna Modifying Enzyme gi|224510583|pdb|3CES|C Chain C, Crystal Structure Of E.Coli Mnmg (Gida), A Highly-Conserved Trna Modifying Enzyme gi|224510584|pdb|3CES|D Chain D, Crystal Structure Of E.Coli Mnmg (Gida), A Highly-Conserved Trna Modifying Enzyme Length = 651 Score = 572 bits (1473), Expect = e-161, Method: Compositional matrix adjust. Identities = 293/616 (47%), Positives = 398/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 29 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 88 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 89 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 148 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 149 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 208 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 209 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 268 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 269 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 328 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 329 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 388 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 389 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 448 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 449 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 508 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A + E+++I+ Sbjct: 509 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 568 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 569 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 628 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 629 VTPAAISILLVWLKKQ 644 >gi|192988502|pdb|3CP2|A Chain A, Crystal Structure Of Gida From E. Coli Length = 649 Score = 572 bits (1473), Expect = e-161, Method: Compositional matrix adjust. Identities = 293/616 (47%), Positives = 398/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 27 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 86 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 87 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 146 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 147 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 206 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 207 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 266 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 267 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 326 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 327 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 386 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 387 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 446 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 447 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 506 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A + E+++I+ Sbjct: 507 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 566 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 567 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 626 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 627 VTPAAISILLVWLKKQ 642 >gi|163796497|ref|ZP_02190457.1| Glucose-inhibited division protein A subfamily [alpha proteobacterium BAL199] gi|159178347|gb|EDP62891.1| Glucose-inhibited division protein A subfamily [alpha proteobacterium BAL199] Length = 635 Score = 572 bits (1473), Expect = e-161, Method: Compositional matrix adjust. Identities = 309/611 (50%), Positives = 408/611 (66%), Gaps = 3/611 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAGCEAAA AA++GA T L+TH+ TIG MSCNPAIGGLGKGHLVREIDAL Sbjct: 10 YDVIVVGGGHAGCEAAAAAARIGARTLLLTHRIDTIGVMSCNPAIGGLGKGHLVREIDAL 69 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ-ENLDVIQGEV 124 DG+MGR D +GIQFRVLN KGPAVRGPR QADR+LY++A+ EIL++ E L + G V Sbjct: 70 DGIMGRAIDRSGIQFRVLNRSKGPAVRGPRAQADRKLYKIAIA-EILAEFECLTIEAGAV 128 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + + D S R VVLTTGTFLRG IH+G+ + PAGR+GD P+ L Sbjct: 129 EDLIVSGGRCLGVRLADGSERRSGAVVLTTGTFLRGEIHLGEERTPAGRVGDGPAVGLAQ 188 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F GRLKTGTP RLDG+TI W + Q D PFS +T++IT Q C IT Sbjct: 189 TLEHAGFSLGRLKTGTPPRLDGRTIDWSGLDAQDGDNPPEPFSTLTERITVPQTVCHITY 248 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ H +I N+ + +YSG I GPRYCPSIEDK+VRF ++ HQIFLEPEGL+ Sbjct: 249 TSEIAHELIRANLHRAPMYSGQISGTGPRYCPSIEDKVVRFADKPRHQIFLEPEGLDDPT 308 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LP ++Q + +IPGLE+ I++ GYAIEYDY++P+EL P L+T++I GL+ Sbjct: 309 VYPNGISTSLPRDVQDAVVASIPGLERAGILQHGYAIEYDYVDPRELTPALQTRRIPGLY 368 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKL-DCICFSRTDSYIGVMIDDLTSKGVLEP 423 LAGQINGTTGYEEAA QGL+AG N+A + + R D YIGVM+DDL S+G EP Sbjct: 369 LAGQINGTTGYEEAAGQGLIAGANAALAAGGATESFAVDRADGYIGVMVDDLISRGAPEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT +G G +G+ R + + + R L++L Sbjct: 429 YRMFTSRAEYRLRLRADNADQRLTELGRNAGLVGQARWLAYCAKREALSVSRETLQNLAG 488 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 T L I QDG+ R A++ L + S + + + P+A ++++L IE+ YA Sbjct: 489 TPPELGRRGIPVNQDGQRRRAWDLLGHAGVSREQILAAWPEAAAIPVAILDQLAIEALYA 548 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 +Y RQ + + + +E ++P+D D S+ +LS E+++ L +P L QA+++ G+TP Sbjct: 549 SYLERQDSDIQAFRRDEALMLPEDLDPGSIGSLSTEIRDILRHARPRTLGQAARLPGVTP 608 Query: 604 AALNLLLIYIK 614 AA LL ++K Sbjct: 609 AATLALLRHVK 619 >gi|323975191|gb|EGB70295.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli TW10509] Length = 629 Score = 572 bits (1473), Expect = e-161, Method: Compositional matrix adjust. Identities = 293/616 (47%), Positives = 398/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 ++ ++ + + + L P+ + + L + P A + E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTMLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ + E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQQRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKKQ 622 >gi|260870475|ref|YP_003236877.1| glucose-inhibited cell-division protein GidA [Escherichia coli O111:H- str. 11128] gi|257766831|dbj|BAI38326.1| glucose-inhibited cell-division protein GidA [Escherichia coli O111:H- str. 11128] gi|323177761|gb|EFZ63345.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli 1180] Length = 629 Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust. Identities = 293/616 (47%), Positives = 399/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N++ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLERSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A + E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKKQ 622 >gi|68249206|ref|YP_248318.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Haemophilus influenzae 86-028NP] gi|81170546|sp|Q4QMT9|MNMG_HAEI8 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|68057405|gb|AAX87658.1| glucose inhibited division protein A [Haemophilus influenzae 86-028NP] Length = 629 Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust. Identities = 300/623 (48%), Positives = 395/623 (63%), Gaps = 17/623 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIGGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DA Sbjct: 6 TYDVIVIGGGHAGTEAALAPARMGLKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 + GLM AD AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q E Sbjct: 66 MGGLMAHAADKAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIFQQEA 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E++ ++ + + + R +VVLT GTFL G IHIG GR GD S +L Sbjct: 126 TDILIEQDRVTGVSTKMGLIFRAKSVVLTAGTFLAGKIHIGLENYEGGRAGDPASVNLSY 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 RLKTGTP R+D +TI +D KQ D L FSFM + +QI C IT Sbjct: 186 RLRDLGLRVDRLKTGTPPRIDARTINFDILAKQHGDAVLPVFSFMGSVSDHPQQIPCYIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL ++ Sbjct: 246 HTNEQTHEVIRNNLDRSPMYTGVIEGIGPRYCPSIEDKVMRFADRNSHQIYLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNGIST+LP ++Q + ++ GLEK II+PGYAIEYDY +P++L PTLETK ISGL Sbjct: 306 EVYPNGISTSLPFDVQMGIVNSMKGLEKARIIKPGYAIEYDYFDPRDLKPTLETKAISGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ + + R SY GV++DDL + G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGINAGLYVQEKEAWYPRRDQSYTGVLVDDLCTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+FTSRAEYR+ LR DNAD RLTPI +LG I E R RF + +++ R L+S+ L Sbjct: 426 YRVFTSRAEYRLLLREDNADIRLTPIAHELGLIDEARWARFNQKMEKIEQERQRLRSIWL 485 Query: 484 ---------TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VI 533 +K L S + + + + L P+ + L S+ P + Sbjct: 486 HPRSEYLEEANKVLGSPLV------REASGEDLLRRPEMTYDILTSLTPYKPAIEDREAV 539 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I Y Y Q E ++ K E IP +FDYS + LSNE++ KL +P ++ Sbjct: 540 EQVEIAIKYQGYIEHQQEEIEKQKRHENTAIPANFDYSKVSGLSNEVRAKLEQHRPVSIG 599 Query: 594 QASKIEGMTPAALNLLLIYIKKN 616 QAS+I G+TPAA++++L+ +KK Sbjct: 600 QASRISGITPAAISIILVNLKKQ 622 >gi|118582020|ref|YP_903270.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Pelobacter propionicus DSM 2379] gi|205375703|sp|A1AV42|MNMG_PELPD RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|118504730|gb|ABL01213.1| glucose inhibited division protein A [Pelobacter propionicus DSM 2379] Length = 628 Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust. Identities = 294/617 (47%), Positives = 409/617 (66%), Gaps = 9/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAA AA++G T L+T I MSCNP+IGGL KGHLV+EIDAL Sbjct: 8 YDVIVVGAGHAGCEAALAAARMGCRTLLLTINLDAIALMSCNPSIGGLAKGHLVKEIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M R DA GIQFR+LN +KGPAVR R QAD++LYRL M+R + +Q+NL + QGEV Sbjct: 68 GGEMARNIDATGIQFRILNTRKGPAVRASRAQADKQLYRLRMKRVLENQDNLHLKQGEVT 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + +++ + + TVVLTTGTF+RG+IHIG GR GD PS L + Sbjct: 128 ALYCDGSVVRGVDTRSGIRFLGKTVVLTTGTFMRGLIHIGLTHYEGGRAGDLPSIGLSDQ 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + GRLKTGTPARLDG+TI + + E Q D PFSF T++IT RQ+ C I T Sbjct: 188 LKQLGLQVGRLKTGTPARLDGRTIDFSRLEPQHGDNPPQPFSFSTERITMRQVPCHIAYT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N +H II + S +Y+G I+ GPRYCPSIEDK+VRF +++ HQ F+EPEGL+T + Sbjct: 248 NERSHDIIRSGLDRSPLYAGIIEGIGPRYCPSIEDKVVRFPDKDRHQAFIEPEGLDTVEM 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YP+G+ST+LP +IQ F R++ GLE+V I+RP Y IEYDY++P +L +LETK I+ L+ Sbjct: 308 YPSGMSTSLPIDIQIAFYRSMEGLERVEIMRPAYGIEYDYVDPIQLHTSLETKAITNLYH 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGT+GYEEAA QG+VAGIN+A ++ + + SR++SYIGVMIDDL + G EPYR Sbjct: 368 AGQINGTSGYEEAAGQGIVAGINAALRTRGEEPLILSRSESYIGVMIDDLITLGTKEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAEYR+ LR DNAD RL IG ++G + + + Y+++ + +++ + L T Sbjct: 428 MFTSRAEYRLLLREDNADQRLREIGYRVGLVSD---AEYEGYLRKRDMIQAERERLAATR 484 Query: 486 KNLSSTSISF-----KQDGKTRTAYE-FLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 ++S + D + T+YE L P+ + +L S +R+ S+V E+++I+ Sbjct: 485 ISMSQAEEEYFTARGLPDLQKGTSYEQLLRRPEITYDDLLSFDTVSRETPSVVREQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ+ + + E +P D DY+++ L+ E+KEKL+ ++P L QAS+I Sbjct: 545 IKYQGYIERQLEQIRRSAKLENTPLPTDMDYAAINGLTTEVKEKLTKVRPDTLGQASRIP 604 Query: 600 GMTPAALNLLLIYIKKN 616 G+TPAA+++L I +K + Sbjct: 605 GVTPAAVSVLSIALKAH 621 >gi|114322027|ref|YP_743710.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Alkalilimnicola ehrlichii MLHE-1] gi|122310595|sp|Q0A4L7|MNMG_ALHEH RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|114228421|gb|ABI58220.1| glucose inhibited division protein A [Alkalilimnicola ehrlichii MLHE-1] Length = 629 Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust. Identities = 296/621 (47%), Positives = 397/621 (63%), Gaps = 15/621 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNPAIGG+GKGHLVREIDAL Sbjct: 7 FDVIVVGGGHAGTEAAMAAARIGARTLLLTHSIETVGQMSCNPAIGGIGKGHLVREIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+M R AD GIQFR LN +KGPAVR R QADR+LYR A++R + +Q L + Q V Sbjct: 67 GGIMARAADRGGIQFRTLNSRKGPAVRATRAQADRQLYRQAIRRAVENQPRLALFQQSVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E ++ +V R VVLT GTFL G IHIG+ GR GD +N+L Sbjct: 127 DLIVEGGRVTGVVTGMGLRFRAPAVVLTVGTFLGGRIHIGESNYGGGRAGDPAANALAAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + F RLKTGTP RLDG+TI W + +Q D+ FSF+ + Q+ C I Sbjct: 187 LRELPFQVDRLKTGTPPRLDGRTIDWARLTEQPGDDPAPVFSFLGRPDEHPAQVPCHIAH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETH II + S +YSG I+ GPRYCPSIEDK+VRF ++ HQIFLEPEGL+T Sbjct: 247 TRPETHDIIRGALDRSPMYSGTIEGVGPRYCPSIEDKVVRFADKGSHQIFLEPEGLDTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LP ++Q++ +R+IPGLE+ I+RPGYAIEYD+ +P+ L PTLET+ + GL+ Sbjct: 307 VYPNGISTSLPFDVQYELVRSIPGLEQARIVRPGYAIEYDFFDPRGLHPTLETRHLEGLW 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+A + + R +Y+GV++DDL ++G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAALRVQGREPWYPRRDQAYLGVLVDDLITRGTREPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLTPIG LG + + R +RF + ++ L + ++ Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTPIGRDLGLVDDERWRRFNAKREALEREQARLAATLIR 486 Query: 485 SKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSI------CPDARKFSSLVIER 535 +L G R E L PD +L + PDA V+E+ Sbjct: 487 PGDLPDALARQVLGGPLRKEQRLEELLRRPDVGYADLMRLPGAGDPVPDAE-----VVEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 L+I++ YA Y RQ E + E+ +P+ Y + LS+E++EKL+ +P + QA Sbjct: 542 LEIQARYAGYLERQHDEVARARRHEQLPLPEGLAYDRVAGLSSEVREKLAAHRPATVGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKKN 616 ++I G+TPAA++LLL+++++ Sbjct: 602 ARIPGVTPAAVSLLLVHLRRQ 622 >gi|193071616|ref|ZP_03052522.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli E110019] gi|192955080|gb|EDV85577.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli E110019] Length = 629 Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust. Identities = 293/616 (47%), Positives = 398/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQSVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A + E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKKQ 622 >gi|300950658|ref|ZP_07164552.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 116-1] gi|300958750|ref|ZP_07170866.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 175-1] gi|300314604|gb|EFJ64388.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 175-1] gi|300450028|gb|EFK13648.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 116-1] gi|323939196|gb|EGB35409.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli E482] Length = 629 Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust. Identities = 293/616 (47%), Positives = 398/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A + E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPSLTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKKQ 622 >gi|170766699|ref|ZP_02901152.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia albertii TW07627] gi|170124137|gb|EDS93068.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia albertii TW07627] Length = 629 Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust. Identities = 293/616 (47%), Positives = 398/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNVAQHPQQVPCYITY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMKGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIEGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEMGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 ++ ++ + + + L P+ + + L S+ P A E+++I+ Sbjct: 487 PSAEAAAEVNAHLTTPLSREASGEDLLRRPEMTYEKLTSLVPFAPALRDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ + E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQQRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 ITPAAISILLVWLKKQ 622 >gi|300902977|ref|ZP_07120920.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 84-1] gi|301305610|ref|ZP_07211700.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 124-1] gi|300404972|gb|EFJ88510.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 84-1] gi|300839118|gb|EFK66878.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 124-1] gi|315254566|gb|EFU34534.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 85-1] Length = 629 Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust. Identities = 293/616 (47%), Positives = 398/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHYVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A + E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKKQ 622 >gi|145635868|ref|ZP_01791558.1| glucose-inhibited division protein A [Haemophilus influenzae PittAA] gi|148825138|ref|YP_001289891.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Haemophilus influenzae PittEE] gi|166222937|sp|A5U9Q7|MNMG_HAEIE RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|145266880|gb|EDK06894.1| glucose-inhibited division protein A [Haemophilus influenzae PittAA] gi|148715298|gb|ABQ97508.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Haemophilus influenzae PittEE] Length = 629 Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust. Identities = 298/623 (47%), Positives = 396/623 (63%), Gaps = 17/623 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIGGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DA Sbjct: 6 TYDVIVIGGGHAGTEAALAPARMGFKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 + GLM AD AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q E Sbjct: 66 MGGLMAHAADKAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIFQQEA 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E++ ++ + + + R +VVLT GTFL G IHIG GR GD S +L + Sbjct: 126 TDILIEQDRVTGVSTKMGLIFRAKSVVLTAGTFLAGKIHIGLENYEGGRAGDPASVNLSH 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 RLKTGTP R+D +TI +D KQ DE L FSFM + +QI C IT Sbjct: 186 RLRDLGLRVDRLKTGTPPRIDARTINFDILAKQHGDEVLPMFSFMGSVDDHPQQIPCYIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL ++ Sbjct: 246 YTNEQTHEVIRNNLDRSPMYTGVIEGIGPRYCPSIEDKVMRFSDRNSHQIYLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNGIST+LP ++Q + ++ GLE I++PGYAIEYDY +P++L PTLETK ISGL Sbjct: 306 EVYPNGISTSLPFDVQMGIVNSMKGLENARIVKPGYAIEYDYFDPRDLKPTLETKSISGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ + D R SY GV++DDL + G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGINAGLYVQEKDAWYPRRDQSYTGVLVDDLCTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+FTSRAEYR+ LR DNAD RLTPI +LG I + R RF + ++ R L+++ L Sbjct: 426 YRVFTSRAEYRLLLREDNADIRLTPIAHELGLIDDARWARFNQKMENIEQERQRLRNIWL 485 Query: 484 ---------TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VI 533 +K L S + + + + L P+ + L S+ P + Sbjct: 486 HPRSEYLEEANKVLGSPLV------REASGEDLLRRPEMTYDILTSLTPYKPAMEDKEAV 539 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I Y Y Q E ++ K E IP +FDYS + +LSNE++ KL +P ++ Sbjct: 540 EQVEIAIKYQGYIEHQQEEIEKQKRHENTAIPANFDYSKVSSLSNEVRAKLEQHRPVSIS 599 Query: 594 QASKIEGMTPAALNLLLIYIKKN 616 QAS+I G+TPAA++++L+ +KK Sbjct: 600 QASRISGITPAAISIILVNLKKQ 622 >gi|221217547|ref|ZP_03589017.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Borrelia burgdorferi 72a] gi|225548536|ref|ZP_03769584.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Borrelia burgdorferi 94a] gi|225549808|ref|ZP_03770772.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Borrelia burgdorferi 118a] gi|221192610|gb|EEE18827.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Borrelia burgdorferi 72a] gi|225369616|gb|EEG99065.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Borrelia burgdorferi 118a] gi|225370799|gb|EEH00234.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Borrelia burgdorferi 94a] Length = 621 Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust. Identities = 294/620 (47%), Positives = 399/620 (64%), Gaps = 8/620 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D IVIGGGHAG EAA ++L T +IT TIG +SCNPAIGGL KG++VREIDAL Sbjct: 3 FDAIVIGGGHAGIEAALALSRLNFKTLMITQNLDTIGKLSCNPAIGGLAKGNMVREIDAL 62 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MGR+ D + IQFRVLN +GPAV+ PR QAD+ +Y+ + + Q+NLD+ Q V Sbjct: 63 GGEMGRIIDFSMIQFRVLNKSRGPAVQAPRAQADKLMYQTKAKETLERQDNLDLFQDTVV 122 Query: 126 GF--NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 F N+ +N I +V + + R S VVLTTGTFLRG I IG+ + GR+ + + L Sbjct: 123 DFLLNSMRNEIEGVVTERGNKFRSSVVVLTTGTFLRGKIFIGEYRADMGRLAEFSAYGLD 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + + F+ GRLKTGTPAR+ K++ + KTE QF D +IPFSF K+ Q+ C +T Sbjct: 183 KTLLGLGFEMGRLKTGTPARIHKKSVDFSKTEVQFGDSDIIPFSFSNGKLDKSQLSCYVT 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH II EN+ S +YSG+I GPRYCPSIEDKIV+F +++ HQIF+EPEG NT+ Sbjct: 243 YTNKKTHEIISENMHLSPLYSGEIVGNGPRYCPSIEDKIVKFKDKDRHQIFIEPEGFNTE 302 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y NG+S++LPE IQ + I +I GLE I RPGYA+EYDYINP EL+P LE+K++ GL Sbjct: 303 EMYLNGLSSSLPENIQQKLINSIEGLEHAVITRPGYAVEYDYINPIELYPNLESKRVKGL 362 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F+AGQ NG++GYEEAAAQGL+AGIN+A + + +RT SYIGV+IDDL +KG EP Sbjct: 363 FIAGQTNGSSGYEEAAAQGLMAGINAALRLQNKKPMILTRTSSYIGVLIDDLVTKGTKEP 422 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R++LR D +D RL IG LG + E R R+ ++ LLK L Sbjct: 423 YRMFTSRAEHRLNLRHDTSDKRLIKIGYDLGLVDEERYSRYLFKESRVEEIKELLKQRRL 482 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 K++ + + ++ Y L P S+ NL I P S +++E+++++ Y Sbjct: 483 GLKDVVDEQL---KKHVSKDFYHILKDPSISLDNLIKIDPSLSD-SKVILEQVELDVKYE 538 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y RQ K + E +P DF+Y + LS E +EK S ++P L QAS+I G+ Sbjct: 539 GYINRQKDLIKRLDNLELVKLPFDFNYEIIEGLSREAREKFSKIQPATLAQASRIPGIRS 598 Query: 604 AALNLLLIYIK--KNTVKLN 621 + +LLIY KN V +N Sbjct: 599 TDITVLLIYFSNPKNKVVIN 618 >gi|111115000|ref|YP_709618.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Borrelia afzelii PKo] gi|123145773|sp|Q0SNY6|MNMG_BORAP RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|110890274|gb|ABH01442.1| glucose inhibited division protein A [Borrelia afzelii PKo] Length = 621 Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust. Identities = 292/620 (47%), Positives = 401/620 (64%), Gaps = 8/620 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D IVIGGGHAG EAA ++L T +IT TIG +SCNPAIGGL KG++VREIDAL Sbjct: 3 FDAIVIGGGHAGIEAALAISRLNFKTLMITQNLDTIGKLSCNPAIGGLAKGNMVREIDAL 62 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MGR+ D + IQFRVLN +GPAV+ PR QAD+ +Y+ + + Q+NLD+ Q V Sbjct: 63 GGEMGRIIDFSMIQFRVLNKSRGPAVQAPRAQADKLMYQTKAKETLERQDNLDLFQDTVV 122 Query: 126 GF--NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 F N+ +N I +V + + R S VVLTTGTFLRG I IG+ + GR+ + + L Sbjct: 123 DFLLNSMRNEIEGVVTERGNKFRSSVVVLTTGTFLRGKIFIGEYRANMGRLAEFSAYGLD 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + + F+ GRLKTGTPAR+ K++ + KTE QF D +IPFSF K+ Q+ C +T Sbjct: 183 KTLLGLGFEMGRLKTGTPARIHRKSVDFSKTEVQFGDSDIIPFSFSNGKLDKSQLSCYVT 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II EN+ S +YSG+I GPRYCPSIEDKIV+F +++ HQIF+EPEG NT+ Sbjct: 243 YTNKRTHEIISENMHLSPLYSGEIVGNGPRYCPSIEDKIVKFKDKDRHQIFIEPEGFNTE 302 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y NG+S++LPE +Q + I +I GLE I RPGYA+EYDYINP EL+P+LE+K++ GL Sbjct: 303 EMYLNGLSSSLPENVQQKLINSIEGLEHAVITRPGYAVEYDYINPIELYPSLESKRVKGL 362 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F+AGQ NG++GYEEAAAQGL+AGIN+A + + +RT SYIGV+IDDL +KG EP Sbjct: 363 FIAGQTNGSSGYEEAAAQGLMAGINAALRLQNKKPMILTRTSSYIGVLIDDLVTKGTKEP 422 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R++LR D +D RL IG LG + E R ++ + ++ LLK L Sbjct: 423 YRMFTSRAEHRLNLRHDTSDKRLIKIGYDLGLVDEERYSKYLFKKRRVEEIKELLKQRRL 482 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 + K+++ + + + Y L P S+ NL I P S +++E+++++ Y Sbjct: 483 SLKDIADEQL---KKHVNKDFYHILKDPSISLDNLIKIDPSLSD-SKVILEQVELDIKYE 538 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y RQ K++ E +P DF+Y + LS E +EK S ++P L QAS+I G+ Sbjct: 539 GYINRQKDLIKKLHNLELVKLPFDFNYGIIEGLSREAREKFSKVQPATLAQASRIPGIRN 598 Query: 604 AALNLLLIYIK--KNTVKLN 621 + +L IY KN V LN Sbjct: 599 TDITVLFIYFSNPKNKVVLN 618 >gi|293413191|ref|ZP_06655857.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli B354] gi|291468324|gb|EFF10819.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli B354] Length = 629 Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust. Identities = 293/616 (47%), Positives = 398/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFS-SLVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A + E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDDQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKKQ 622 >gi|16131609|ref|NP_418197.1| 5-methylaminomethyl-2-thiouridine modification at tRNA U34 [Escherichia coli str. K-12 substr. MG1655] gi|26250487|ref|NP_756527.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli CFT073] gi|82546099|ref|YP_410046.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella boydii Sb227] gi|89110266|ref|AP_004046.1| glucose-inhibited cell-division protein [Escherichia coli str. K-12 substr. W3110] gi|110644082|ref|YP_671812.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli 536] gi|157155354|ref|YP_001465231.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli E24377A] gi|157163223|ref|YP_001460541.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli HS] gi|170022222|ref|YP_001727176.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli ATCC 8739] gi|170083242|ref|YP_001732562.1| glucose-inhibited cell-division protein [Escherichia coli str. K-12 substr. DH10B] gi|188493426|ref|ZP_03000696.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Escherichia coli 53638] gi|191170517|ref|ZP_03032070.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli F11] gi|193063784|ref|ZP_03044871.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli E22] gi|194428129|ref|ZP_03060673.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli B171] gi|209921222|ref|YP_002295306.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli SE11] gi|218556312|ref|YP_002389226.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Escherichia coli IAI1] gi|218692029|ref|YP_002400241.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli ED1a] gi|218697467|ref|YP_002405134.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli 55989] gi|218702591|ref|YP_002410220.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli IAI39] gi|218707387|ref|YP_002414906.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli UMN026] gi|227883963|ref|ZP_04001768.1| glucose inhibited cell division protein A [Escherichia coli 83972] gi|238902832|ref|YP_002928628.1| glucose-inhibited cell-division protein [Escherichia coli BW2952] gi|254038960|ref|ZP_04873012.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Escherichia sp. 1_1_43] gi|256025528|ref|ZP_05439393.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia sp. 4_1_40B] gi|260846474|ref|YP_003224252.1| glucose-inhibited cell-division protein GidA [Escherichia coli O103:H2 str. 12009] gi|293407378|ref|ZP_06651300.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Escherichia coli FVEC1412] gi|293417214|ref|ZP_06659841.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli B185] gi|293464067|ref|ZP_06664481.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli B088] gi|298383120|ref|ZP_06992715.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Escherichia coli FVEC1302] gi|300815004|ref|ZP_07095229.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 107-1] gi|300824549|ref|ZP_07104659.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 119-7] gi|300896070|ref|ZP_07114629.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 198-1] gi|300916390|ref|ZP_07133130.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 115-1] gi|300925571|ref|ZP_07141444.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 182-1] gi|300983872|ref|ZP_07176780.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 200-1] gi|300984345|ref|ZP_07176951.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 45-1] gi|301020855|ref|ZP_07184916.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 69-1] gi|301047564|ref|ZP_07194636.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 185-1] gi|301324958|ref|ZP_07218513.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 78-1] gi|301644417|ref|ZP_07244416.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 146-1] gi|306815907|ref|ZP_07450045.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli NC101] gi|307140441|ref|ZP_07499797.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli H736] gi|307313187|ref|ZP_07592812.1| glucose inhibited division protein A [Escherichia coli W] gi|309795702|ref|ZP_07690117.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 145-7] gi|312971967|ref|ZP_07786141.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli 1827-70] gi|331644468|ref|ZP_08345597.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli H736] gi|331649567|ref|ZP_08350653.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli M605] gi|331655403|ref|ZP_08356402.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli M718] gi|331665395|ref|ZP_08366296.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli TA143] gi|331670592|ref|ZP_08371431.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli TA271] gi|331675225|ref|ZP_08375978.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli TA280] gi|331679845|ref|ZP_08380515.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli H591] gi|331685468|ref|ZP_08386054.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli H299] gi|62288115|sp|P0A6U3|MNMG_ECOLI RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|62288116|sp|P0A6U4|MNMG_ECOL6 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|123343409|sp|Q0TAW8|MNMG_ECOL5 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|123558241|sp|Q31UP0|MNMG_SHIBS RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|166989735|sp|A7ZTV2|MNMG_ECO24 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|166989736|sp|A8A6K4|MNMG_ECOHS RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|189039341|sp|B1IWZ7|MNMG_ECOLC RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|205831506|sp|B1X9W9|MNMG_ECODH RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|226704793|sp|B7NR43|MNMG_ECO7I RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|226704794|sp|B7M597|MNMG_ECO8A RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|226704795|sp|B7NF57|MNMG_ECOLU RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|238058368|sp|B6I3X8|MNMG_ECOSE RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|254811511|sp|B7L889|MNMG_ECO55 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|254811512|sp|B7N2I0|MNMG_ECO81 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|259495846|sp|C4ZZ19|MNMG_ECOBW RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|26110917|gb|AAN83101.1|AE016769_216 Glucose inhibited division protein A [Escherichia coli CFT073] gi|2367273|gb|AAC76764.1| 5-methylaminomethyl-2-thiouridine modification at tRNA U34 [Escherichia coli str. K-12 substr. MG1655] gi|81247510|gb|ABB68218.1| GidA [Shigella boydii Sb227] gi|85676297|dbj|BAE77547.1| glucose-inhibited cell-division protein [Escherichia coli str. K12 substr. W3110] gi|110345674|gb|ABG71911.1| glucose inhibited division protein A [Escherichia coli 536] gi|157068903|gb|ABV08158.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli HS] gi|157077384|gb|ABV17092.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli E24377A] gi|169757150|gb|ACA79849.1| glucose inhibited division protein A [Escherichia coli ATCC 8739] gi|169891077|gb|ACB04784.1| glucose-inhibited cell-division protein [Escherichia coli str. K-12 substr. DH10B] gi|188488625|gb|EDU63728.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Escherichia coli 53638] gi|190909325|gb|EDV68911.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli F11] gi|192930499|gb|EDV83106.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli E22] gi|194413887|gb|EDX30165.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli B171] gi|209914481|dbj|BAG79555.1| glucose inhibited division protein A [Escherichia coli SE11] gi|218354199|emb|CAV00833.1| glucose-inhibited cell-division protein [Escherichia coli 55989] gi|218363081|emb|CAR00719.1| glucose-inhibited cell-division protein [Escherichia coli IAI1] gi|218372577|emb|CAR20451.1| glucose-inhibited cell-division protein [Escherichia coli IAI39] gi|218429593|emb|CAR10551.2| glucose-inhibited cell-division protein [Escherichia coli ED1a] gi|218434484|emb|CAR15411.1| glucose-inhibited cell-division protein [Escherichia coli UMN026] gi|222035454|emb|CAP78199.1| tRNA uridine 5-carboxymethylaminomethyl modification [Escherichia coli LF82] gi|226838925|gb|EEH70952.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Escherichia sp. 1_1_43] gi|227839241|gb|EEJ49707.1| glucose inhibited cell division protein A [Escherichia coli 83972] gi|238861321|gb|ACR63319.1| glucose-inhibited cell-division protein [Escherichia coli BW2952] gi|257761621|dbj|BAI33118.1| glucose-inhibited cell-division protein GidA [Escherichia coli O103:H2 str. 12009] gi|260451402|gb|ACX41824.1| glucose inhibited division protein A [Escherichia coli DH1] gi|281180799|dbj|BAI57129.1| glucose inhibited division protein A [Escherichia coli SE15] gi|284923855|emb|CBG36954.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme (glucose-inhibited division protein A) [Escherichia coli 042] gi|291321699|gb|EFE61135.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli B088] gi|291425669|gb|EFE98705.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Escherichia coli FVEC1412] gi|291431245|gb|EFF04238.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli B185] gi|298276956|gb|EFI18474.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Escherichia coli FVEC1302] gi|300300550|gb|EFJ56935.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 185-1] gi|300306827|gb|EFJ61347.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 200-1] gi|300360056|gb|EFJ75926.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 198-1] gi|300398425|gb|EFJ81963.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 69-1] gi|300408381|gb|EFJ91919.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 45-1] gi|300416294|gb|EFJ99604.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 115-1] gi|300418345|gb|EFK01656.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 182-1] gi|300522950|gb|EFK44019.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 119-7] gi|300531896|gb|EFK52958.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 107-1] gi|300848129|gb|EFK75889.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 78-1] gi|301077256|gb|EFK92062.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 146-1] gi|305850303|gb|EFM50760.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli NC101] gi|306906870|gb|EFN37379.1| glucose inhibited division protein A [Escherichia coli W] gi|307555880|gb|ADN48655.1| glucose-inhibited division protein A [Escherichia coli ABU 83972] gi|308120581|gb|EFO57843.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 145-7] gi|309704189|emb|CBJ03536.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme (glucose-inhibited division protein A) [Escherichia coli ETEC H10407] gi|310334344|gb|EFQ00549.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli 1827-70] gi|312948307|gb|ADR29134.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O83:H1 str. NRG 857C] gi|315063051|gb|ADT77378.1| glucose-inhibited cell-division protein [Escherichia coli W] gi|315138326|dbj|BAJ45485.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Escherichia coli DH1] gi|315292827|gb|EFU52179.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 153-1] gi|315296885|gb|EFU56174.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 16-3] gi|315618551|gb|EFU99137.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli 3431] gi|320186276|gb|EFW61012.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella flexneri CDC 796-83] gi|320201226|gb|EFW75807.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli EC4100B] gi|323161007|gb|EFZ46926.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli E128010] gi|323173366|gb|EFZ58995.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli LT-68] gi|323380887|gb|ADX53155.1| glucose inhibited division protein A [Escherichia coli KO11] gi|323934908|gb|EGB31286.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli E1520] gi|323944217|gb|EGB40297.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli H120] gi|324007991|gb|EGB77210.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 57-2] gi|324012779|gb|EGB81998.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 60-1] gi|324018461|gb|EGB87680.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 117-3] gi|324115903|gb|EGC09829.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli E1167] gi|330908054|gb|EGH36573.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli AA86] gi|331036762|gb|EGI08988.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli H736] gi|331042065|gb|EGI14209.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli M605] gi|331047418|gb|EGI19496.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli M718] gi|331057905|gb|EGI29891.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli TA143] gi|331062654|gb|EGI34574.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli TA271] gi|331067670|gb|EGI39072.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli TA280] gi|331073017|gb|EGI44342.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli H591] gi|331077839|gb|EGI49051.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli H299] gi|332089334|gb|EGI94438.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella boydii 3594-74] gi|332345731|gb|AEE59065.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli UMNK88] Length = 629 Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust. Identities = 293/616 (47%), Positives = 398/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A + E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKKQ 622 >gi|170680590|ref|YP_001746071.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli SMS-3-5] gi|205831507|sp|B1LL68|MNMG_ECOSM RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|170518308|gb|ACB16486.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli SMS-3-5] Length = 629 Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust. Identities = 293/616 (47%), Positives = 398/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDLAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A + E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKKQ 622 >gi|326568737|gb|EGE18807.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Moraxella catarrhalis BC8] Length = 632 Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust. Identities = 298/622 (47%), Positives = 394/622 (63%), Gaps = 18/622 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 +++DVIVIGGGHAG EA AA++GA+T LITH T+G MSCNPAIGG+GK HLVRE+D Sbjct: 10 KTFDVIVIGGGHAGTEACLAAARMGANTLLITHNIETLGQMSCNPAIGGIGKSHLVREVD 69 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D AGIQFRVLN +KG AVR R QADR LY+ A++ + +Q NL + Q Sbjct: 70 ALGGAMALATDKAGIQFRVLNSRKGAAVRATRAQADRILYKAAIRHTLENQPNLTIFQQS 129 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E ++V + VVLT+GTFL GVIH+G GR GD P+ L Sbjct: 130 VDDIIVENTRAVAVVTATGIRLNTRAVVLTSGTFLGGVIHVGLDHQSGGRAGDMPAIRLA 189 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + + GRLKTGTPAR+D +T+ + Q D L S+M D + RQI C I Sbjct: 190 DRLRELKLPVGRLKTGTPARIDARTVDFSVMTVQSGDTPLPVMSYMGDVAMHPRQINCYI 249 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II N+ S ++SG I+ GPRYCPSIEDKI RF +++ HQIF+EPEGL T Sbjct: 250 THTNERTHEIIRANLDRSPMFSGKIEGVGPRYCPSIEDKIHRFADKDSHQIFIEPEGLTT 309 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNGIST+LP ++Q +FI ++ GLE +I RPGYAIEYDY +P+ L PTLETK I Sbjct: 310 HELYPNGISTSLPFDVQLEFIHSMKGLENAHITRPGYAIEYDYFDPQNLKPTLETKSIDA 369 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQINGTTGYEEAAAQGL+AG+N+AR + R ++Y+GV++DDL + G E Sbjct: 370 LYFAGQINGTTGYEEAAAQGLLAGLNAARMALDESSWVPQRHEAYLGVLVDDLITHGTKE 429 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAE+R+ LR DNAD RLT IG +LG + + R RF++ ++ + LK + Sbjct: 430 PYRMFTSRAEHRLILREDNADARLTAIGRELGLVDDERWARFSQKMESIASETARLKDIW 489 Query: 483 LTSKNLSSTSISFKQD---------GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVI 533 T N + QD K + + L P+ + ++ + S+ V Sbjct: 490 ATPNN------AIGQDFMANTGEILTKENSLLDLLKRPNITFDDIAKVSDST--VSAKVG 541 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I Y Y RQ E +++K E L+P DFDY S+ LSNE+ +KLS ++P L Sbjct: 542 EQIEISVKYQGYIERQNDEIEQMKRLENTLLPLDFDYKSVSGLSNEIVQKLSQIRPTTLG 601 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I G+TPAA++LL + IKK Sbjct: 602 QASRISGVTPAAVSLLAMTIKK 623 >gi|302880136|ref|YP_003848700.1| glucose inhibited division protein A [Gallionella capsiferriformans ES-2] gi|302582925|gb|ADL56936.1| glucose inhibited division protein A [Gallionella capsiferriformans ES-2] Length = 627 Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust. Identities = 291/616 (47%), Positives = 405/616 (65%), Gaps = 7/616 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA V+A+ G T L++H T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALVSARAGCKTLLLSHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN KG AVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 67 GGAMALATDIGGIQFRILNSSKGYAVRATRAQADRMLYKQAIRTMLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ ++ +V Q TVVLT GTFL G+IH+G+ AGR GD PS SL + Sbjct: 127 DLLVEQDKVTGVVTQLGLRFSAKTVVLTAGTFLGGLIHVGQANYQAGRAGDPPSVSLSHR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + + GRLKTGTP R+DG++I + ++Q D+ + FSFM ++ + RQ+ C IT Sbjct: 187 LRELNLPVGRLKTGTPPRIDGRSIDYSVLQEQPGDDPVPVFSFMGNRAMHPRQMPCWITE 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ TH II + S +++G I+ GPRYCPSIEDKI RF + HQIFLEPEGL T Sbjct: 247 TSERTHDIIRGGLDRSPLFTGAIEGVGPRYCPSIEDKITRFSGKTSHQIFLEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q +R+I G+E +I+RPGYAIEYDY NP L +LETK I GLF Sbjct: 307 IYPNGISTSLPFDVQLALVRSIKGMENAHILRPGYAIEYDYFNPCGLKSSLETKAIKGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N++ + ++D C R ++Y+GVM+DDL ++GV EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNASLQVREMDAWCPRRDEAYLGVMVDDLITQGVTEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG KLG + + R + F + + L+S ++ Sbjct: 427 RMFTSRAEYRLQLREDNADLRLTEIGRKLGIVDDARWQAFEIKREAIALEQQRLRSTWMS 486 Query: 485 SKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFS--SLVIERLQIE 539 +NL + + K + +E L PD + +L ++ P A + + V E+++I+ Sbjct: 487 PRNLPVEEAQRVLGKNIDHEYSLHELLLRPDVNYASLMTL-PGAGEATPDPWVSEQVEIQ 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + Y Y RQ E K + E + +P D DY + LS E+++KL+ KP + QA++I Sbjct: 546 AKYQGYIDRQHAEIKSSERNEVQRLPSDLDYREVRGLSIEVQQKLNTHKPETVGQAARIS 605 Query: 600 GMTPAALNLLLIYIKK 615 G+TPAA++LLL+++K+ Sbjct: 606 GITPAAISLLLVHLKR 621 >gi|225873934|ref|YP_002755393.1| glucose inhibited division protein A [Acidobacterium capsulatum ATCC 51196] gi|254811501|sp|C1FAF1|MNMG_ACIC5 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|225794576|gb|ACO34666.1| glucose inhibited division protein A [Acidobacterium capsulatum ATCC 51196] Length = 659 Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust. Identities = 303/643 (47%), Positives = 413/643 (64%), Gaps = 39/643 (6%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+V+G GHAGCEAA AA++G TAL T I MSCNPA+GG+ KGHLVRE+DAL Sbjct: 7 YDVVVVGAGHAGCEAAMAAARMGLRTALFTLNLDLIAQMSCNPAVGGIAKGHLVREVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+MG +ADA GIQFR+LN +GPAV PR Q D++ YR+ M+ + SQ NL + Q E Sbjct: 67 GGIMGELADAVGIQFRLLNTSRGPAVWSPRAQCDKQQYRVKMREVLESQPNLYIKQAEAV 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E ++ I ++D IR V+TTGTFL G+IH G+ +IPAGR G+ PS L S Sbjct: 127 DVVVEDARVTGIRLRDGRTIRAGATVITTGTFLNGLIHCGEERIPAGRSGEPPSVLLGES 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + RLKTGTP RLDG+TI W + E+Q D PFSF T + RQI C I T Sbjct: 187 LKQLGLRGCRLKTGTPPRLDGRTIDWARFEEQPGDADPTPFSFRTKTLPMRQISCHIAYT 246 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 ET R+I EN+ S +YSG I++ GPRYCPSIEDK+V+F +++ HQ FLEPEGLNT V Sbjct: 247 TPETLRLIRENVHRSPMYSGQIEAIGPRYCPSIEDKVVKFPDKDRHQFFLEPEGLNTHEV 306 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG+ST+LP E+Q++ +R+IPGLE ++RPGYAIEYD I+P EL +L KK GL+L Sbjct: 307 YVNGMSTSLPMEVQYEIVRSIPGLENAEMLRPGYAIEYDAIDPTELDRSLRVKKFEGLYL 366 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGT+GYEEAA QG++AGIN+A +RT++Y G++IDDL SKG EPYR Sbjct: 367 AGQINGTSGYEEAACQGIMAGINAALSVRDDAPFTLNRTEAYTGILIDDLISKGTNEPYR 426 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL-LKSLVLT 484 MFTSRAE+R+ LR DNAD RLTP G +LG I + + +A Y E R++ L+ L+ T Sbjct: 427 MFTSRAEFRLHLRIDNADRRLTPYGRRLGLIHD---EAWADY--EAKQARAVTLEKLLAT 481 Query: 485 S--KNLSSTSISFKQDGKT-------RTAYEFLSYPDFSIQNLFSIC------------- 522 K+++ + + Q G T +T + L P+ SI+ L+++ Sbjct: 482 RKIKDVTPLAPALAQAGITDAASLAGQTYAQLLKRPEMSIEALWTVIRAEVAEGEAASLF 541 Query: 523 ----PDARKFSSLV-------IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYS 571 +A + S + ++ ++ E YA Y +Q +++K E R+IP+ FDY+ Sbjct: 542 APWFTNAEEASQPLPAFVRNELKSVETEIKYAGYLDQQRKSMEKLKKAETRVIPEWFDYA 601 Query: 572 SLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIK 614 S+ LS E++EKL ++P + QAS+I G+TPAAL+L+ +YI+ Sbjct: 602 SVSGLSREMQEKLVRVRPQTIGQASRIPGVTPAALSLINVYIE 644 >gi|324111640|gb|EGC05621.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia fergusonii B253] Length = 629 Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust. Identities = 294/616 (47%), Positives = 399/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C +T Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNAAQHPQQVPCYLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMKGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEMGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSI-SFKQDGKTRTAY--EFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 + ++ +R A + L P+ + + L S+ P A + E+++I+ Sbjct: 487 PSTEGVAEVNAYLTSPLSREASGEDLLRRPEMTYETLTSLAPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ + E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQQRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKKQ 622 >gi|254511824|ref|ZP_05123891.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rhodobacteraceae bacterium KLH11] gi|221535535|gb|EEE38523.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rhodobacteraceae bacterium KLH11] Length = 532 Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust. Identities = 275/526 (52%), Positives = 365/526 (69%) Query: 91 VRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTV 150 ++GPR QADR LYR AM +E +ENL VI GEV F + N ++ + + D S I TV Sbjct: 1 MQGPRAQADRALYRAAMVKETRQRENLSVIAGEVVDFVMDGNRVTGVKLADGSEIPARTV 60 Query: 151 VLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTII 210 +LT+GTFLRGVIHIG + P GRMGD PS L F RLKTGTP RLDG+TI Sbjct: 61 ILTSGTFLRGVIHIGDVSRPGGRMGDRPSVKLAERLDGFALPMARLKTGTPPRLDGRTIN 120 Query: 211 WDKTEKQFADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSY 270 WD E+Q D FSF+++ +T QI CGIT TN ETH II N+ SA+Y G I Sbjct: 121 WDILERQDGDAEPTLFSFLSNTVTAPQIACGITHTNAETHEIIERNLSRSAMYGGRIDGI 180 Query: 271 GPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLE 330 GPRYCPSIEDKIVRF ++ HQIFLEPEG++ VYPNGIST+LPEE+Q ++R+I GLE Sbjct: 181 GPRYCPSIEDKIVRFADKESHQIFLEPEGVHDHTVYPNGISTSLPEEVQIDYVRSIRGLE 240 Query: 331 KVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSA 390 + NII+PGYAIEYDY++P+ L +L ISGL+LAGQINGTTGYEEAAAQGLVAG+N+A Sbjct: 241 QANIIQPGYAIEYDYVDPRVLKASLSLPDISGLYLAGQINGTTGYEEAAAQGLVAGLNAA 300 Query: 391 RKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIG 450 +S + I F+R+DSYIGVM+DDLT++GV EPYRMFTSRAE+R+SLR DNAD RLTPIG Sbjct: 301 LESQERGPIHFTRSDSYIGVMVDDLTTRGVAEPYRMFTSRAEFRLSLRADNADQRLTPIG 360 Query: 451 MKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSY 510 + GCI E RQ FAK +++ + L + T K +++ I+ QDG R L++ Sbjct: 361 EEHGCISEERQVIFAKKLEKLEVAKVKLAARTYTPKEINAAGITVNQDGNKRDGMAVLAF 420 Query: 511 PDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDY 570 PD + +++ ++ P+ + + +++ ++ YA Y RQ + + +K +E IP+DFDY Sbjct: 421 PDVTFEDVVALEPNLADTEAEIRRQIERDALYANYIARQQRDVEAMKRDEAHEIPRDFDY 480 Query: 571 SSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKN 616 +L LS E+K+KLS KP N+ QA ++EG+TPAAL L+L ++++ Sbjct: 481 FALDGLSAEMKQKLSEAKPENIAQAGRVEGVTPAALTLVLAKLRRD 526 >gi|323959807|gb|EGB55457.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli H489] Length = 629 Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust. Identities = 293/616 (47%), Positives = 399/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGLMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N++ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLERSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A + E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKKQ 622 >gi|218551275|ref|YP_002385067.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Escherichia fergusonii ATCC 35469] gi|218358817|emb|CAQ91474.1| glucose-inhibited cell-division protein [Escherichia fergusonii ATCC 35469] gi|325499547|gb|EGC97406.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia fergusonii ECD227] Length = 629 Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust. Identities = 292/616 (47%), Positives = 397/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C +T Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNAAQHPQQVPCYLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMKGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEMGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 ++ + + + L P+ + + L S+ P A + E+++I+ Sbjct: 487 PSTEGVAEVNAHLTSPLSREASGEDLLRRPEMTYETLTSLAPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ + E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQQRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKKQ 622 >gi|254360965|ref|ZP_04977111.1| glucose inhibited cell division protein A [Mannheimia haemolytica PHL213] gi|153092444|gb|EDN73507.1| glucose inhibited cell division protein A [Mannheimia haemolytica PHL213] Length = 630 Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust. Identities = 303/618 (49%), Positives = 390/618 (63%), Gaps = 5/618 (0%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 N+ YDVIV+GGGHAG EAA A++G T ++TH T+G MSCNPAIGG+GKGHLV+EI Sbjct: 4 NQIYDVIVVGGGHAGTEAALAPARMGLKTLILTHNVDTLGQMSCNPAIGGIGKGHLVKEI 63 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DA+ GLM + D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q Sbjct: 64 DAMGGLMAKATDVAGIQFRTLNNSKGPAVRATRAQADRVLYRNAVRTALENQPNLDIFQQ 123 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 EV E N V + + VVLT GTFL G IHIG GR GD + L Sbjct: 124 EVVDILVENNRAVGAVTKMGLTFKARAVVLTAGTFLAGKIHIGLDNYAGGRAGDPAATML 183 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECG 241 + + RLKTGTP RLD +TI +D KQ DE L FSFM D + RQI C Sbjct: 184 ADRLRDLNLRVDRLKTGTPPRLDARTINFDVLAKQHGDEVLPVFSFMGDVSQHPRQIPCY 243 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT TN +TH +I ++ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGLN Sbjct: 244 ITHTNDQTHDLIRNSLDRSPMYTGIIEGVGPRYCPSIEDKVMRFADRNSHQIYLEPEGLN 303 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T VYPNGIST+LP ++Q + ++ GLE II+PGYAIEYDY +P++L PTLETK I Sbjct: 304 TIEVYPNGISTSLPFDVQMGIVNSMKGLENTRIIKPGYAIEYDYFDPRDLKPTLETKAID 363 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQINGTTGYEEA AQGL+AGIN+A + + +R +Y GV++DDL + G Sbjct: 364 GLFFAGQINGTTGYEEAGAQGLLAGINAALQVQGKEAWYPTRDQAYTGVLVDDLCTLGTK 423 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+FTSRAEYR+ LR DNAD RLTP +LG I E R RF + ++ R+ LKS Sbjct: 424 EPYRVFTSRAEYRLLLREDNADIRLTPKAHELGLIDEARWVRFNQKMEAIEQERARLKST 483 Query: 482 V--LTSKNLSSTSISFKQD-GKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQ 537 L NL + + + + + P+ S + L I A V E+++ Sbjct: 484 WAHLQMPNLDELNALLANPLAREASGEDLIRRPEMSYEKLTQIALFAPAIEDKQVAEQVE 543 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I Y Y Q E + K E LIP +FDY + +LSNE++ KL +P ++ QAS+ Sbjct: 544 IAIKYQGYIEHQYNEIERHKRHENTLIPVEFDYDKVESLSNEVRAKLMQHRPVSIGQASR 603 Query: 598 IEGMTPAALNLLLIYIKK 615 I G+TPAA+++LL+ +KK Sbjct: 604 ISGITPAAISILLVNLKK 621 >gi|152978019|ref|YP_001343648.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Actinobacillus succinogenes 130Z] gi|171472940|sp|A6VL66|MNMG_ACTSZ RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|150839742|gb|ABR73713.1| glucose inhibited division protein A [Actinobacillus succinogenes 130Z] Length = 629 Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust. Identities = 303/622 (48%), Positives = 397/622 (63%), Gaps = 15/622 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIGGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA Sbjct: 6 NYDVIVIGGGHAGTEAALAPARMGLKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKEIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 + GLM AD AGIQFR LN KGPAVR R QADR LYR A+++ + +Q NLD+ Q E Sbjct: 66 MGGLMATAADRAGIQFRTLNASKGPAVRATRAQADRVLYRQAVRQALENQPNLDIFQQEA 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E+ + + + R V+LT GTFL G IHIG GR GD S +L + Sbjct: 126 TDILLERERAAGVSTKMGLTFRAKAVILTAGTFLAGKIHIGLTNYEGGRAGDPASVTLSH 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM--TDKITNRQIECGI 242 RLKTGTP RLD +TI +D KQ+ D L FSFM TD+ RQI C I Sbjct: 186 RLRDLGLRVDRLKTGTPPRLDARTINFDILAKQYGDAELPVFSFMGSTDQ-HPRQIPCFI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH +I N+ S +Y+G I+ GPRYCPSIEDKI+RF +R HQI+LEPEGL + Sbjct: 245 THTNEQTHDVIRNNLDRSPMYTGVIEGIGPRYCPSIEDKIMRFADRTSHQIYLEPEGLTS 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VYPNGIST+LP ++Q + + ++ GLE I++PGYAIEYDY +P++L PTLETK I G Sbjct: 305 NEVYPNGISTSLPFDVQMKIVNSMKGLENTRIVKPGYAIEYDYFDPRDLKPTLETKAIGG 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AGIN+ + D R +Y+GV++DDL + G E Sbjct: 365 LFFAGQINGTTGYEEAAAQGLLAGINAGLFVREKDAWFPRRDQAYVGVLVDDLCTLGTKE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYR+FTSRAEYR+ LR DNAD+RLTPI +LG I E R RF + + R LK + Sbjct: 425 PYRVFTSRAEYRLLLREDNADSRLTPIAHELGLIDEARWARFNRKMDNITKERERLKQIW 484 Query: 483 LTSKNLSSTSISFKQDGK-TRTAY--EFLSYPDFSIQNL-----FSICPDARKFSSLVIE 534 + ++ I+ + TR A + L P+ S + L FS + ++ + E Sbjct: 485 IHPQSEHLNHINGLLNAPLTREASGEDLLRRPEVSYEKLTKTAAFSPALEDKQAA----E 540 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I Y Y Q E ++ K E LIP+ FDYS + LSNE++ KL +P ++ Q Sbjct: 541 QVEIAIKYQGYIEHQQEEIEKQKRHENTLIPERFDYSLVAGLSNEVRAKLEQHRPVSIGQ 600 Query: 595 ASKIEGMTPAALNLLLIYIKKN 616 A +I G+TPAA+++LL+ +KK Sbjct: 601 AGRISGVTPAAISILLVNLKKQ 622 >gi|260857844|ref|YP_003231735.1| glucose-inhibited cell-division protein GidA [Escherichia coli O26:H11 str. 11368] gi|257756493|dbj|BAI27995.1| glucose-inhibited cell-division protein GidA [Escherichia coli O26:H11 str. 11368] gi|323155422|gb|EFZ41605.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli EPECa14] Length = 629 Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust. Identities = 293/616 (47%), Positives = 398/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNVSQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A + E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKKQ 622 >gi|51598439|ref|YP_072627.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Borrelia garinii PBi] gi|81170527|sp|Q662I6|MNMG_BORGA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|51573010|gb|AAU07035.1| glucose inhibited division protein A [Borrelia garinii PBi] Length = 621 Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust. Identities = 292/620 (47%), Positives = 401/620 (64%), Gaps = 8/620 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D IVIGGGHAG EAA ++L T +IT TIG +SCNPAIGGL KG++VREIDAL Sbjct: 3 FDAIVIGGGHAGIEAALALSRLDFKTLMITQNLDTIGKLSCNPAIGGLAKGNMVREIDAL 62 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MGR+ D + IQFRVLN +GPAV+ PR QAD+ +Y+ + + Q+NLD+ Q V Sbjct: 63 GGEMGRIIDFSMIQFRVLNKSRGPAVQAPRAQADKLMYQTKAKETLERQDNLDLFQDTVV 122 Query: 126 GF--NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 F N+ +N I +V + + R + VVLTTGTFLRG I IG+ + GR+ + + L Sbjct: 123 DFLLNSMRNEIKGVVTERGNKFRSNVVVLTTGTFLRGKIFIGEYRANMGRLAEFSAYGLD 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + + F+ GRLKTGTPAR+ K++ + KTE QF D +IPFSF + Q+ C +T Sbjct: 183 KTLLSLGFEMGRLKTGTPARIHKKSVDFSKTEVQFGDSDIIPFSFSNGNLDKSQLSCYVT 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II EN+ S +YSG+I GPRYCPSIEDKIV+F +++ HQIF+EPEG NT+ Sbjct: 243 YTNKRTHEIISENMHLSPLYSGEIVGNGPRYCPSIEDKIVKFKDKDRHQIFIEPEGFNTE 302 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y NG+S++LPE IQ +FI +I GLE I RPGYA+EYDYINP EL+P LE+K++ GL Sbjct: 303 EMYLNGLSSSLPENIQQKFINSIEGLEHAIITRPGYAVEYDYINPIELYPNLESKRVKGL 362 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F+AGQ NG++GYEEAAAQGL+AGIN+A + + +RT SYIGV+IDDL +KG EP Sbjct: 363 FVAGQTNGSSGYEEAAAQGLMAGINAALRLQNKKPMILTRTSSYIGVLIDDLVTKGTKEP 422 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R++LR D +D RL IG LG + E R ++ + ++ LLK L Sbjct: 423 YRMFTSRAEHRLNLRHDTSDKRLIKIGYDLGLVDEERYSKYLFKKRRVEEIKELLKQRRL 482 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 + K+++ + + ++ Y L P S+ NL I P S +++E+++++ Y Sbjct: 483 SLKDVADEQL---KKHVSKDFYHILKDPSISLDNLIKIDPSLSD-SKVILEQVELDVKYE 538 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y RQ K++ E +P DF+Y + LS E +EK S ++P L QAS+I G+ Sbjct: 539 GYINRQKDLIKKLNNLELVKLPFDFNYEIIEGLSREAREKFSKVQPATLAQASRIPGIRN 598 Query: 604 AALNLLLIYIK--KNTVKLN 621 + +L IY KN V LN Sbjct: 599 TDITVLFIYFSNPKNKVVLN 618 >gi|170718147|ref|YP_001785176.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Haemophilus somnus 2336] gi|189039343|sp|B0UWH3|MNMG_HAES2 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|168826276|gb|ACA31647.1| glucose inhibited division protein A [Haemophilus somnus 2336] Length = 629 Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust. Identities = 300/616 (48%), Positives = 397/616 (64%), Gaps = 5/616 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIGGGHAG EAA A++ T L+TH T+G MSCNPAIGG+GKGHLV+EIDA Sbjct: 6 NYDVIVIGGGHAGTEAALATARMKLKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 + GLM AD AGIQFR LN KGPAVR R QADR LYR ++ + +Q NLD+ Q EV Sbjct: 66 MGGLMATAADKAGIQFRTLNSSKGPAVRATRAQADRVLYRQVVRIALENQPNLDIFQQEV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 EK+ I+ + + R +VVLT GTFL G IHIG GR GD S +L Sbjct: 126 TDIILEKDSIAGVETKMGLKFRAKSVVLTAGTFLAGKIHIGLENYAGGRAGDPASVNLAK 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQIECGIT 243 + RLKTGTP R+D +TI +D KQ+ DE+L FSFM + + QI C IT Sbjct: 186 KLRDLNLRVNRLKTGTPPRIDARTINFDILAKQYGDEKLPVFSFMGSVEQHPEQIPCYIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I +N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL ++ Sbjct: 246 HTNDQTHDVIRKNLDRSPMYTGVIEGIGPRYCPSIEDKVIRFSDRNSHQIYLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNGIST+LP ++Q + + ++ GLEK I++PGYAIEYDY +P++L PTLETK ISGL Sbjct: 306 EVYPNGISTSLPFDVQMKIVNSMKGLEKARIVKPGYAIEYDYFDPRDLKPTLETKAISGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ + + R +YIGV++DDL + G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGINAGLFVQEKESWFPRRDQAYIGVLVDDLCTVGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+FTSRAEYR+ LR DNAD RLT I +LG I + R RF + ++ R L+S+ L Sbjct: 426 YRVFTSRAEYRLLLREDNADIRLTSIARELGLIDDIRWARFNQKMENIELERQRLRSIWL 485 Query: 484 T--SKNLSSTSISFKQD-GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VIERLQIE 539 S+ L+ + K + + L P+ + Q L ++ P +E+++I Sbjct: 486 HPRSEYLNEANEILKSPLVREVNGEDLLRRPEINYQILTALTPFKPAMEDKEAVEQVEIA 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y Q E + K E IP +FDY ++ LSNE+ KL +P ++ QAS+I Sbjct: 546 IKYQGYIEHQQEEIERQKRHENTAIPANFDYKNISGLSNEVCAKLEQYRPISIGQASRIS 605 Query: 600 GMTPAALNLLLIYIKK 615 G+TPAA+++LL+ +KK Sbjct: 606 GITPAAISILLVNLKK 621 >gi|82779067|ref|YP_405416.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella dysenteriae Sd197] gi|309784452|ref|ZP_07679091.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella dysenteriae 1617] gi|123561167|sp|Q329T0|MNMG_SHIDS RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|81243215|gb|ABB63925.1| glucose-inhibited division [Shigella dysenteriae Sd197] gi|308927959|gb|EFP73427.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella dysenteriae 1617] Length = 629 Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust. Identities = 292/616 (47%), Positives = 398/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K + GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFLQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTRVT 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A + E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKKQ 622 >gi|148653578|ref|YP_001280671.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Psychrobacter sp. PRwf-1] gi|205375708|sp|A5WGD0|MNMG_PSYWF RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|148572662|gb|ABQ94721.1| glucose inhibited division protein A [Psychrobacter sp. PRwf-1] Length = 642 Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust. Identities = 299/614 (48%), Positives = 393/614 (64%), Gaps = 11/614 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDV+VIGGGHAG EAA AA++GA T L+TH T+G MSCNPAIGG+GK HLVREID Sbjct: 16 KAYDVVVIGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPAIGGIGKSHLVREID 75 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D AGIQFRVLN +KG AVR R QADR LY+ A++ + +Q NLD+ Q Sbjct: 76 ALGGAMALATDKAGIQFRVLNSRKGAAVRATRAQADRILYKAAIRHTLENQPNLDLFQQG 135 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 E ++V + R TVVLT+GTFL GVIHIG GR GD PS L Sbjct: 136 ADDILVENGKACAVVTATGIIFRTKTVVLTSGTFLGGVIHIGLDNSKGGRAGDQPSIKLA 195 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + GRLKTGTPAR+D +T+ + + Q D L SFM + + Q+ C I Sbjct: 196 ERLRELKLPVGRLKTGTPARIDARTVDFSVMQTQPGDTPLPVMSFMGNVDMHPEQVNCFI 255 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II +++ S ++SG I+ GPRYCPSIEDKI RF ++N HQIF+EPEGL T Sbjct: 256 THTNEKTHDIIRKHLDRSPLFSGTIEGVGPRYCPSIEDKIHRFADKNSHQIFIEPEGLTT 315 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNGIST+LP ++Q +FIRT+ GLE +I RPGYAIEYDY NP+ L PTLETK I Sbjct: 316 HELYPNGISTSLPFDVQLEFIRTMAGLENAHITRPGYAIEYDYFNPQNLKPTLETKSIDS 375 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNK---LDCICFSRTDSYIGVMIDDLTSKG 419 L+ AGQINGTTGYEEA QGL+AG+N+A + +D R +Y+GV++DDL + G Sbjct: 376 LYFAGQINGTTGYEEAGVQGLLAGVNAALSTQDNPVMDSWTPRRDQAYLGVLVDDLITHG 435 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT IG KLG + + R + + + ++ + LK Sbjct: 436 TKEPYRMFTSRAEYRLLLREDNADQRLTEIGRKLGLVDDTRWQAYQQKMESMATESARLK 495 Query: 480 SLVLTSKNLSSTSISFKQDG----KTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIER 535 L T N + +Q G K TAY+ L P+ ++ ++ + ++ V E+ Sbjct: 496 DLWATPHNELGKKFT-EQTGEVLSKEATAYDLLKRPNVGFNDIAAVT--GAQVAADVGEQ 552 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I YA Y RQ + ++K E +P DFDY ++ LSNE+ +KL+ ++P L QA Sbjct: 553 IEISVKYAGYIDRQQEDIDQMKRLENTQLPADFDYKAVSGLSNEIVQKLNDIRPATLAQA 612 Query: 596 SKIEGMTPAALNLL 609 S+I G+TPAA+ LL Sbjct: 613 SRISGVTPAAIQLL 626 >gi|326564668|gb|EGE14886.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Moraxella catarrhalis 46P47B1] Length = 632 Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust. Identities = 298/622 (47%), Positives = 394/622 (63%), Gaps = 18/622 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 +++DVIVIGGGHAG EA AA++GA+T LITH T+G MSCNPAIGG+GK HLVRE+D Sbjct: 10 KTFDVIVIGGGHAGTEACLAAARMGANTLLITHNIETLGQMSCNPAIGGIGKSHLVREVD 69 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D AGIQFRVLN +KG AVR R QADR LY+ A++ + +Q NL + Q Sbjct: 70 ALGGAMALATDKAGIQFRVLNSRKGAAVRATRAQADRILYKAAIRHTLENQPNLTIFQQS 129 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E ++V + VVLT+GTFL GVIH+G GR GD P+ L Sbjct: 130 VDDIIVENTRAVAVVTATGIRLNTRAVVLTSGTFLGGVIHVGLDHQSGGRAGDMPAIHLA 189 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + + GRLKTGTPAR+D +T+ + Q D L S+M D + RQI C I Sbjct: 190 DRLRELKLPVGRLKTGTPARIDARTVDFSVMTVQSGDTPLPVMSYMGDVAMHPRQINCYI 249 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II N+ S ++SG I+ GPRYCPSIEDKI RF +++ HQIF+EPEGL T Sbjct: 250 THTNERTHEIIRANLDRSPMFSGKIEGVGPRYCPSIEDKIHRFADKDSHQIFIEPEGLTT 309 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNGIST+LP ++Q +FI ++ GLE +I RPGYAIEYDY +P+ L PTLETK I Sbjct: 310 HELYPNGISTSLPFDVQLEFIHSMKGLENAHITRPGYAIEYDYFDPQNLKPTLETKSIDA 369 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQINGTTGYEEAAAQGL+AG+N+AR + R ++Y+GV++DDL + G E Sbjct: 370 LYFAGQINGTTGYEEAAAQGLLAGLNAARMALDEPSWVPQRHEAYLGVLVDDLITHGTKE 429 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAE+R+ LR DNAD RLT IG +LG + + R RF++ ++ + LK + Sbjct: 430 PYRMFTSRAEHRLILREDNADARLTAIGRELGLVDDERWARFSQKMESIASETARLKDIW 489 Query: 483 LTSKNLSSTSISFKQD---------GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVI 533 T N + QD K + + L P+ + ++ + S+ V Sbjct: 490 ATPNN------AIGQDFMANTGEILTKENSLLDLLKRPNITFDDIAKVSDST--VSAKVG 541 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I Y Y RQ E +++K E L+P DFDY S+ LSNE+ +KLS ++P L Sbjct: 542 EQIEISVKYQGYIERQNDEIEQMKRLENTLLPLDFDYKSVSGLSNEIVQKLSQIRPTTLG 601 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I G+TPAA++LL + IKK Sbjct: 602 QASRISGVTPAAVSLLAMTIKK 623 >gi|94501613|ref|ZP_01308130.1| glucose-inhibited division protein A [Oceanobacter sp. RED65] gi|94426296|gb|EAT11287.1| glucose-inhibited division protein A [Oceanobacter sp. RED65] Length = 628 Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust. Identities = 294/617 (47%), Positives = 401/617 (64%), Gaps = 5/617 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIV+GGGHAG EA AA++G T L+TH T+G MSCNPAIGG+GK HLV+EID Sbjct: 5 KRYDVIVVGGGHAGTEACLAAARMGCKTLLLTHSIETVGVMSCNPAIGGIGKSHLVKEID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 A DG M R D GIQFR LN +KGPAVR R QADR LY+ A++ + +Q NL+ Q Sbjct: 65 AFDGAMARATDRGGIQFRTLNSRKGPAVRATRAQADRALYKAAIREIVENQPNLEFFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 E + + +V Q I +VVLTTGTFL GVIHIG GR GD PSN+L Sbjct: 125 CDDLIVEGDTVKGVVTQAGIKIYADSVVLTTGTFLGGVIHIGMDNYQGGRAGDPPSNNLA 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGI 242 + F+ GRLKTGTPAR+D +++ + ++Q D+ SFM ++ + +QI+C I Sbjct: 185 KRLRELPFNVGRLKTGTPARIDARSVDFSVMQRQPGDDVTPIMSFMGNREEHPQQIDCFI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II + S +YSG I+ GPRYCPSIEDK++RF ++N HQIF+EPEGL+T Sbjct: 245 THTNEQTHDIIRAGLDRSPMYSGVIEGIGPRYCPSIEDKVMRFADKNSHQIFVEPEGLST 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNGIST+LP ++Q + I ++ G E +I RPGYAIEYD+ NP++L +LETK + G Sbjct: 305 HELYPNGISTSLPFDVQVEMIHSMKGFENAHITRPGYAIEYDFFNPQDLKHSLETKFMQG 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEA AQGL+AG N+A +S + D R ++YIGV++DDL + G E Sbjct: 365 LFFAGQINGTTGYEEAGAQGLLAGTNAALRSMEKDAWYPRRDEAYIGVLVDDLITMGTNE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS-L 481 PYRMFTSRAEYR+ LR DNAD RLT G +LG +G+ R F + + LKS Sbjct: 425 PYRMFTSRAEYRLILREDNADLRLTEKGRELGLVGDERWAAFCEKKEAIEQEEQRLKSTW 484 Query: 482 VLTSKNLSSTSISFKQDGKTR--TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 +L + F + TR + + L P+ + ++ ++ + V E++QI Sbjct: 485 ILPNTEEGDVVNGFSKTPITREYSLMDLLKRPEITYSDIANLKGEPVA-DPQVSEQVQIM 543 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + Y Y RQ+ E ++++ E L+P D D+S + LSNE+ +KLS ++P L AS+I+ Sbjct: 544 AKYEGYINRQLEEIEQMRRYEDTLLPADLDFSKVGGLSNEIVQKLSEIQPETLGTASRIQ 603 Query: 600 GMTPAALNLLLIYIKKN 616 G+TPAA++ LLIY+KK+ Sbjct: 604 GVTPAAISQLLIYLKKH 620 >gi|30250397|ref|NP_842467.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Nitrosomonas europaea ATCC 19718] gi|81170562|sp|Q82S78|MNMG_NITEU RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|30181192|emb|CAD86388.1| gidA; glucose inhibited division protein A [Nitrosomonas europaea ATCC 19718] Length = 639 Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust. Identities = 291/620 (46%), Positives = 400/620 (64%), Gaps = 3/620 (0%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 ++ +D+IV+GGGHAG EAA AA++G T L+T T+G MSCNP+IGG+GKGHLV+EI Sbjct: 4 SKDFDIIVVGGGHAGTEAALAAARMGQKTLLLTQNLDTLGQMSCNPSIGGIGKGHLVKEI 63 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G M D AGIQFR+LN KGPAVR R QADR LYR A++R + +Q +L ++Q Sbjct: 64 DALGGAMAAATDEAGIQFRILNSSKGPAVRATRAQADRVLYRQAIRRRLEAQPDLLLLQS 123 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 V + I+ +V VVLT GTFL GV H+G AGR GD S L Sbjct: 124 TVDDLLLNGDKITGVVTHLGMTFSARAVVLTVGTFLGGVAHVGHQNFQAGRAGDPASIRL 183 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECG 241 + + + GRLKTGTP R+D +TI + +Q DE + FSF+ + + RQI C Sbjct: 184 AHRLREMNLSVGRLKTGTPPRIDARTIDFRILREQPGDEPVPVFSFLGNITQHPRQISCW 243 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +TRTN TH II + S +Y+G I+ GPRYCPSIEDK+VRF ER+ H IFLEPEGL Sbjct: 244 MTRTNERTHEIIRTGLDRSPLYTGKIEGIGPRYCPSIEDKVVRFSERDAHTIFLEPEGLE 303 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T +YPNGIST+LP ++Q + +R+I GLE +I RPGYAIEYDY +P+ L +LETK I Sbjct: 304 TSEIYPNGISTSLPFDVQVELVRSIAGLENAHITRPGYAIEYDYFDPRTLKKSLETKVID 363 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQINGTTGYEEAAAQGL+AG+N++ K + + C SR ++YIGV++DDL ++GV Sbjct: 364 GLFFAGQINGTTGYEEAAAQGLLAGLNASLKIKEQEPWCPSRDEAYIGVLVDDLVTRGVT 423 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAE+R+ LR DNAD RLT G +LG + E R + FA + ++ L++ Sbjct: 424 EPYRMFTSRAEFRLQLREDNADMRLTETGYRLGLVSEERWQAFAAKREAIETEKTRLRNT 483 Query: 482 VLTSKNLSSTSISFK-QDGKTRTAYEFLSYPDFSIQNLFSICPDARK-FSSLVIERLQIE 539 ++ LS + D ++ + Y+ L P+ L S+ + S V ++++I+ Sbjct: 484 WISPGTLSKLQTPDQPADDRSYSLYDLLRRPEIGYAELVSLSARGQSVIDSQVAQQVEID 543 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ E E ++PKD DY ++ LSNE+ +KL+ +P + QA++I Sbjct: 544 VKYEGYIERQRQEVVRHAQHEAMILPKDMDYRAVRGLSNEVTQKLNQHQPETIGQAARIS 603 Query: 600 GMTPAALNLLLIYIKKNTVK 619 G+TPAA++LLL+++K+ + Sbjct: 604 GITPAAISLLLVHLKRGMAR 623 >gi|194435665|ref|ZP_03067768.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli 101-1] gi|253775624|ref|YP_003038455.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254163692|ref|YP_003046800.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli B str. REL606] gi|300932376|ref|ZP_07147641.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 187-1] gi|194425208|gb|EDX41192.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli 101-1] gi|242379279|emb|CAQ34086.1| protein involved in a tRNA modification pathway, subunit of complex involved in modification of tRNA [Escherichia coli BL21(DE3)] gi|253326668|gb|ACT31270.1| glucose inhibited division protein A [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975593|gb|ACT41264.1| glucose-inhibited division protein A [Escherichia coli B str. REL606] gi|253979750|gb|ACT45420.1| glucose-inhibited division protein A [Escherichia coli BL21(DE3)] gi|300459881|gb|EFK23374.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 187-1] gi|323971220|gb|EGB66466.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli TA007] Length = 629 Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust. Identities = 293/616 (47%), Positives = 398/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGLMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A + E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKKQ 622 >gi|320180077|gb|EFW55019.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella boydii ATCC 9905] Length = 629 Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust. Identities = 293/616 (47%), Positives = 398/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFRVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTRVT 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A + E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKKQ 622 >gi|43257|emb|CAA25773.1| unnamed protein product [Escherichia coli] gi|290590|gb|AAA62093.1| glucose inhibited division protein [Escherichia coli] Length = 628 Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust. Identities = 296/615 (48%), Positives = 399/615 (64%), Gaps = 4/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFKQDGK-TRTAY-EFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIESS 541 ++ ++ +R A E L P+ + + L ++ P A + E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQVK 546 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G+ Sbjct: 547 YEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISGV 606 Query: 602 TPAALNLLLIYIKKN 616 TPAA+++LL+++KK Sbjct: 607 TPAAISILLVWLKKQ 621 >gi|226320915|ref|ZP_03796466.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Borrelia burgdorferi 29805] gi|226233687|gb|EEH32417.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Borrelia burgdorferi 29805] Length = 621 Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust. Identities = 293/620 (47%), Positives = 399/620 (64%), Gaps = 8/620 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D IVIGGGHAG EAA ++L T +IT TIG +SCNPAIGGL KG++VREIDAL Sbjct: 3 FDAIVIGGGHAGIEAALALSRLNFKTLMITQNLDTIGKLSCNPAIGGLAKGNMVREIDAL 62 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MGR+ D + IQFRVLN +GPAV+ PR QAD+ +Y+ + + Q+NLD+ Q V Sbjct: 63 GGEMGRIIDFSMIQFRVLNKSRGPAVQAPRAQADKLMYQTKAKETLERQDNLDLFQDTVV 122 Query: 126 GF--NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 F N+ +N I +V + + R S VVLTTGTFLRG I IG+ + GR+ + + L Sbjct: 123 DFLLNSMRNEIEGVVTERGNKFRSSVVVLTTGTFLRGKIFIGEYRADMGRLAEFSAYGLD 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + + F+ GRLKTGTPAR+ K++ + K E QF D +IPFSF K+ Q+ C +T Sbjct: 183 KTLLGLGFEMGRLKTGTPARIHKKSVDFSKMEVQFGDSDIIPFSFSNGKLDKSQLSCYVT 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH II EN+ S +YSG+I GPRYCPSIEDKIV+F +++ HQIF+EPEG NT+ Sbjct: 243 YTNKKTHEIISENMHLSPLYSGEIVGNGPRYCPSIEDKIVKFKDKDRHQIFIEPEGFNTE 302 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y NG+S++LPE IQ + I +I GLE I RPGYA+EYDYINP EL+P LE+K++ GL Sbjct: 303 EMYLNGLSSSLPENIQQKLINSIEGLEHAVITRPGYAVEYDYINPIELYPNLESKRVKGL 362 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F+AGQ NG++GYEEAAAQGL+AGIN+A + + +RT SYIGV+IDDL +KG EP Sbjct: 363 FIAGQTNGSSGYEEAAAQGLMAGINAALRLQNKKPMILTRTSSYIGVLIDDLVTKGTKEP 422 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R++LR D +D RL IG LG + E R R+ ++ LLK L Sbjct: 423 YRMFTSRAEHRLNLRHDTSDKRLIKIGYDLGLVDEERYSRYLFKESRVEEIKELLKQRRL 482 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 + K++ + + ++ Y L P S+ NL I P S +++E+++++ Y Sbjct: 483 SLKDVVDEQL---KKHVSKDFYHILKDPSISLDNLIKIDPSLSD-SKVILEQVELDVKYE 538 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y RQ K + E +P DF+Y + LS E +EK S ++P L QAS+I G+ Sbjct: 539 GYINRQKDLIKRLDNLELVKLPFDFNYEIVEGLSREAREKFSKIQPATLAQASRIPGIRS 598 Query: 604 AALNLLLIYIK--KNTVKLN 621 + +LLIY KN V +N Sbjct: 599 TDITVLLIYFSNPKNKVVIN 618 >gi|301155227|emb|CBW14692.1| glucose-inhibited cell-division protein [Haemophilus parainfluenzae T3T1] Length = 629 Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust. Identities = 296/617 (47%), Positives = 393/617 (63%), Gaps = 5/617 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+GGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DA Sbjct: 6 NYDVIVVGGGHAGTEAALAPARMGLKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 + GLM AD AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q EV Sbjct: 66 MGGLMAHAADKAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRIALENQPNLDIFQQEV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E++ + + + R +V+LT GTFL G IHIG GR GD S +L + Sbjct: 126 TDILIEQDRVCGVETKMGLKFRAKSVILTAGTFLAGKIHIGLEHYEGGRAGDPASVTLSH 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 + RLKTGTP R+D +TI +D KQ D L FSFM + +QI C IT Sbjct: 186 RLRDLNLRVDRLKTGTPPRIDARTINFDILAKQHGDAVLPVFSFMGSVDDHPQQIPCYIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL ++ Sbjct: 246 HTNEQTHEVIRNNLDRSPMYTGVIEGIGPRYCPSIEDKVMRFADRNSHQIYLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNGIST+LP ++Q + ++ GLEK II+PGYAIEYDY +P++L PTLETK ISGL Sbjct: 306 EVYPNGISTSLPFDVQMGIVNSMKGLEKARIIKPGYAIEYDYFDPRDLKPTLETKSISGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ + + R SY GV++DDL + G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGINAGLYVQEKEAWYPRRDQSYTGVLVDDLCTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+FTSRAEYR+ LR DNAD RLTPI +LG I E R RF + ++ R L+S+ L Sbjct: 426 YRVFTSRAEYRLLLREDNADIRLTPIAHELGLIDEARWARFNQKMENIEQERQRLRSIWL 485 Query: 484 TSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VIERLQIE 539 ++ + + + + L P+ + L S+ P +E+++I Sbjct: 486 HPRSEYLEEANKVLGSPLVREANGEDLLRRPEITYDILTSLTPYKPAMEDREAVEQVEIA 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y Q E ++ K E IP +FDYS + LSNE++ KL +P ++ QAS+I Sbjct: 546 IKYQGYIEHQQEEIEKQKRHENTAIPANFDYSKVSGLSNEVRAKLEQHRPVSIGQASRIS 605 Query: 600 GMTPAALNLLLIYIKKN 616 G+TPAA++++L+ +KK Sbjct: 606 GITPAAISIILVNLKKQ 622 >gi|256021237|ref|ZP_05435102.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella sp. D9] gi|332282464|ref|ZP_08394877.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Shigella sp. D9] gi|332104816|gb|EGJ08162.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Shigella sp. D9] Length = 629 Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust. Identities = 292/616 (47%), Positives = 398/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I G+F Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGMF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A + E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKKQ 622 >gi|296113565|ref|YP_003627503.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Moraxella catarrhalis RH4] gi|295921259|gb|ADG61610.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Moraxella catarrhalis RH4] gi|326565484|gb|EGE15655.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Moraxella catarrhalis 12P80B1] gi|326567753|gb|EGE17859.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Moraxella catarrhalis BC1] gi|326568611|gb|EGE18682.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Moraxella catarrhalis BC7] gi|326572605|gb|EGE22594.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Moraxella catarrhalis CO72] Length = 632 Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust. Identities = 298/622 (47%), Positives = 394/622 (63%), Gaps = 18/622 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 +++DVIVIGGGHAG EA AA++GA+T LITH T+G MSCNPAIGG+GK HLVRE+D Sbjct: 10 KTFDVIVIGGGHAGTEACLAAARMGANTLLITHNIETLGQMSCNPAIGGIGKSHLVREVD 69 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D AGIQFRVLN +KG AVR R QADR LY+ A++ + +Q NL + Q Sbjct: 70 ALGGAMALATDKAGIQFRVLNSRKGAAVRATRAQADRILYKAAIRHTLENQPNLTIFQQS 129 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E ++V + VVLT+GTFL GVIH+G GR GD P+ L Sbjct: 130 VDDIIVENTRAVAVVTATGIRLNTRAVVLTSGTFLGGVIHVGLDHQSGGRAGDMPAIRLA 189 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + + GRLKTGTPAR+D +T+ + Q D L S+M D + RQI C I Sbjct: 190 DRLRELKLPVGRLKTGTPARIDARTVDFSVMTVQSGDTPLPVMSYMGDVAMHPRQINCYI 249 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II N+ S ++SG I+ GPRYCPSIEDKI RF +++ HQIF+EPEGL T Sbjct: 250 THTNERTHEIIRANLDRSPMFSGKIEGVGPRYCPSIEDKIHRFADKDSHQIFIEPEGLTT 309 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNGIST+LP ++Q +FI ++ GLE +I RPGYAIEYDY +P+ L PTLETK I Sbjct: 310 HELYPNGISTSLPFDVQLEFIHSMKGLENAHITRPGYAIEYDYFDPQNLKPTLETKSIDA 369 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQINGTTGYEEAAAQGL+AG+N+AR + R ++Y+GV++DDL + G E Sbjct: 370 LYFAGQINGTTGYEEAAAQGLLAGLNAARMALDEPSWVPQRHEAYLGVLVDDLITHGTKE 429 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAE+R+ LR DNAD RLT IG +LG + + R RF++ ++ + LK + Sbjct: 430 PYRMFTSRAEHRLILREDNADARLTAIGRELGLVDDERWARFSQKMESIASETARLKDIW 489 Query: 483 LTSKNLSSTSISFKQD---------GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVI 533 T N + QD K + + L P+ + ++ + S+ V Sbjct: 490 ATPNN------AIGQDFMANTGEILTKENSLLDLLKRPNITFDDIAKVSDST--VSAKVG 541 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I Y Y RQ E +++K E L+P DFDY S+ LSNE+ +KLS ++P L Sbjct: 542 EQIEISVKYQGYIERQNDEIEQMKRLENTLLPLDFDYKSVSGLSNEIVQKLSQIRPTTLG 601 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I G+TPAA++LL + IKK Sbjct: 602 QASRISGVTPAAVSLLAMTIKK 623 >gi|188535592|ref|YP_001909389.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Erwinia tasmaniensis Et1/99] gi|188030634|emb|CAO98530.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA (Glucose-inhibited division protein A) [Erwinia tasmaniensis Et1/99] Length = 629 Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust. Identities = 299/616 (48%), Positives = 390/616 (63%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIVIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLMG D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMGHAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLLVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGMDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +TI + Q D L FSFM D + RQ+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAPQHGDTPLPVFSFMGDVSQHPRQVPCYITY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHEVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E IIRPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMHGMENAKIIRPGYAIEYDFFDPRDLKPTLESKYIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+ R S + R +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAGRLSADKESWAPRRDQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R RF + ++ R L+ + + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEAGRELGLVDDARWARFNEKLESIEQERQRLREIWVH 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFS-SLVIERLQIES 540 K+ ++ K + + L P+ + Q L ++ A + + E+++I+ Sbjct: 487 PKSECVAEVNAVISAALTKEASGEDLLRRPEMTYQQLMTLTHFAPALADTQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E E L+P D DY + LSNE KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQEEIDRQLRNENTLLPTDLDYQQVSGLSNESIAKLNDSKPSSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LLIY+KK Sbjct: 607 ITPAAISILLIYLKKQ 622 >gi|326559567|gb|EGE09981.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Moraxella catarrhalis 7169] Length = 632 Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust. Identities = 296/616 (48%), Positives = 391/616 (63%), Gaps = 6/616 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 +++DVIVIGGGHAG EA AA++GA+T LITH T+G MSCNPAIGG+GK HLVRE+D Sbjct: 10 KTFDVIVIGGGHAGTEACLAAARMGANTLLITHNIETLGQMSCNPAIGGIGKSHLVREVD 69 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D AGIQFRVLN +KG AVR R QADR LY+ A++ + +Q NL + Q Sbjct: 70 ALGGAMALATDKAGIQFRVLNSRKGAAVRATRAQADRILYKAAIRHTLENQPNLTIFQQS 129 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E ++V + VVLT+GTFL GVIH+G GR GD P+ L Sbjct: 130 VDDIIVENTRAVAVVTATGIRLNTRAVVLTSGTFLGGVIHVGLDHQSGGRAGDMPAIRLA 189 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + + GRLKTGTPAR+D +T+ + Q D L S+M D + RQI C I Sbjct: 190 DRLRELKLPVGRLKTGTPARIDARTVDFSVMTVQSGDTPLPVMSYMGDVAMHPRQINCYI 249 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II N+ S ++SG I+ GPRYCPSIEDKI RF +++ HQIF+EPEGL T Sbjct: 250 THTNERTHEIIRANLDRSPMFSGKIEGVGPRYCPSIEDKIHRFADKDSHQIFIEPEGLTT 309 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNGIST+LP ++Q +FI ++ GLE +I RPGYAIEYDY +P+ L PTLETK I Sbjct: 310 HELYPNGISTSLPFDVQLEFIHSMKGLENAHITRPGYAIEYDYFDPQNLKPTLETKSIDA 369 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQINGTTGYEEAAAQGL+AG+N+AR + R ++Y+GV++DDL + G E Sbjct: 370 LYFAGQINGTTGYEEAAAQGLLAGLNAARMALDEPSWVPQRHEAYLGVLVDDLITHGTKE 429 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAE+R+ LR DNAD RLT IG +LG + + R RF++ ++ + LK + Sbjct: 430 PYRMFTSRAEHRLILREDNADARLTAIGRELGLVDDERWARFSQKMESIASETARLKDIW 489 Query: 483 LTSKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 T N K + + L P+ + ++ + S+ V E+++I Sbjct: 490 ATPNNAIGQDFMVNTGEILTKENSLLDLLKRPNITFDDIAKVSDST--VSAKVGEQIEIS 547 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ E +++K E L+P DFDY S+ LSNE+ +KLS ++P L QAS+I Sbjct: 548 VKYQGYIERQNDEIEQMKRLENTLLPLDFDYKSVSGLSNEIVQKLSQIRPTTLGQASRIS 607 Query: 600 GMTPAALNLLLIYIKK 615 G+TPAA++LL + IKK Sbjct: 608 GVTPAAVSLLAMTIKK 623 >gi|326562695|gb|EGE12997.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Moraxella catarrhalis 103P14B1] gi|326574202|gb|EGE24150.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Moraxella catarrhalis 101P30B1] gi|326574987|gb|EGE24916.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Moraxella catarrhalis O35E] Length = 632 Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust. Identities = 298/622 (47%), Positives = 394/622 (63%), Gaps = 18/622 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 +++DVIVIGGGHAG EA AA++GA+T LITH T+G MSCNPAIGG+GK HLVRE+D Sbjct: 10 KTFDVIVIGGGHAGTEACLAAARMGANTLLITHNIETLGQMSCNPAIGGIGKSHLVREVD 69 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D AGIQFRVLN +KG AVR R QADR LY+ A++ + +Q NL + Q Sbjct: 70 ALGGAMALATDKAGIQFRVLNSRKGAAVRATRAQADRILYKAAIRHTLENQPNLTIFQQS 129 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E ++V + VVLT+GTFL GVIH+G GR GD P+ L Sbjct: 130 VDDIIVENTRAVAVVTATGIRLNTRAVVLTSGTFLGGVIHVGLDHQSGGRAGDMPAIRLA 189 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + + GRLKTGTPAR+D +T+ + Q D L S+M D + RQI C I Sbjct: 190 DRLRELKLPVGRLKTGTPARIDARTVDFSVMTVQSGDTPLPVMSYMGDVAMHPRQINCYI 249 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II N+ S ++SG I+ GPRYCPSIEDKI RF +++ HQIF+EPEGL T Sbjct: 250 THTNERTHEIIRANLDRSPMFSGKIEGVGPRYCPSIEDKIHRFADKDSHQIFIEPEGLTT 309 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNGIST+LP ++Q +FI ++ GLE +I RPGYAIEYDY +P+ L PTLETK I Sbjct: 310 HELYPNGISTSLPFDVQLEFIHSMKGLENAHITRPGYAIEYDYFDPQNLKPTLETKSIDA 369 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQINGTTGYEEAAAQGL+AG+N+AR + R ++Y+GV++DDL + G E Sbjct: 370 LYFAGQINGTTGYEEAAAQGLLAGLNAARMALDEPSWVPQRHEAYLGVLVDDLITHGTKE 429 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAE+R+ LR DNAD RLT IG +LG + + R RF++ ++ + LK + Sbjct: 430 PYRMFTSRAEHRLILREDNADARLTAIGRELGLVDDERWARFSQKMESIASETARLKDIW 489 Query: 483 LTSKNLSSTSISFKQD---------GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVI 533 T N + QD K + + L P+ + ++ + S+ V Sbjct: 490 ATPNN------AIGQDFMANTGEILTKENSLLDLLKRPNIAFDDIAKVSDST--VSAKVG 541 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I Y Y RQ E +++K E L+P DFDY S+ LSNE+ +KLS ++P L Sbjct: 542 EQIEISVKYQGYIERQNDEIEQMKRLENTLLPLDFDYKSVSGLSNEIVQKLSQIRPTTLG 601 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I G+TPAA++LL + IKK Sbjct: 602 QASRISGVTPAAVSLLAMTIKK 623 >gi|198284890|ref|YP_002221211.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Acidithiobacillus ferrooxidans ATCC 53993] gi|218668068|ref|YP_002427570.1| glucose-inhibited division protein A [Acidithiobacillus ferrooxidans ATCC 23270] gi|254811502|sp|B7JB95|MNMG_ACIF2 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|254811503|sp|B5ER53|MNMG_ACIF5 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|198249411|gb|ACH85004.1| glucose inhibited division protein A [Acidithiobacillus ferrooxidans ATCC 53993] gi|218520281|gb|ACK80867.1| glucose-inhibited division protein A [Acidithiobacillus ferrooxidans ATCC 23270] Length = 624 Score = 570 bits (1468), Expect = e-160, Method: Compositional matrix adjust. Identities = 305/626 (48%), Positives = 411/626 (65%), Gaps = 13/626 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + S+DVIV+GGGHAG EAAA AA+LG T L+T TIG MSCNPAIGG+GKGHLV+E Sbjct: 1 MQNSFDVIVVGGGHAGTEAAAAAARLGVRTLLLTQNLDTIGQMSCNPAIGGIGKGHLVKE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DAL G+M D AGIQFR LN KGPAVR R QADR LY+ A++R + L + Q Sbjct: 61 VDALGGIMALAIDQAGIQFRTLNASKGPAVRATRAQADRSLYKRAVRRLLEDIPALQLFQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G V E + + ++++ ++R + VVLTTGTFL G +H+G PAGR GD PSN+ Sbjct: 121 GMVGDLLMEGDRLGGVILETGLVLRAAQVVLTTGTFLGGRVHMGDQNYPAGRAGDPPSNA 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L + F RLKTGTP R+DG++I + E Q D FSFMT +I Q+ C Sbjct: 181 LAQRLREMAFPVARLKTGTPPRIDGRSIDYGVLEAQPGDAPPPAFSFMTRRIGVPQLACH 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT TN TH II N+ SA+Y G I+S GPRYCPSIEDK+VRF ++ HQ+FLEPEGL+ Sbjct: 241 ITHTNARTHEIIQTNLHQSAMYGGHIQSVGPRYCPSIEDKVVRFADKASHQVFLEPEGLD 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T VYPNGIST+LP +Q + +R++ GLE ++RPGYAIEYDY++P+EL P+LE++++ Sbjct: 301 THEVYPNGISTSLPFGVQIELVRSMRGLENAVLLRPGYAIEYDYLDPRELHPSLESRRLP 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQINGTTGYEEAAAQGL+AG+N+AR++ +L R ++Y+GVM+DDL ++G+ Sbjct: 361 GLFCAGQINGTTGYEEAAAQGLLAGLNAARRARELAAWTPGRHEAYLGVMVDDLVTRGLD 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+ LR DNAD RLTP G LG + ++R F+ R+ L+ L Sbjct: 421 EPYRMFTSRAEYRLQLREDNADLRLTPHGRALGLVDDQRWTAFSAKQDAVQAERNRLEGL 480 Query: 482 VLTSKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLFSI-----CPDARKFSSLVI 533 + + + I+ K D + TA E L PD+ +L + C DA+ Sbjct: 481 RIHPGSAIAGRIAAKTDQPLSRDVTALELLRRPDWDYASLLQVLDLVPCSDAQ-----AC 535 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+L+IE YA Y RQ E E IP D DY+++ LS E+ ++L+ +P + Sbjct: 536 EQLEIECKYAGYVARQHDEITRAARWEGTDIPADMDYAAVRGLSTEVMQRLARQRPQTIG 595 Query: 594 QASKIEGMTPAALNLLLIYIKKNTVK 619 AS+I G+TPAA++LLLI++K+ ++ Sbjct: 596 LASRIPGVTPAAVSLLLIHVKRRGLR 621 >gi|312149390|gb|ADQ29461.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Borrelia burgdorferi N40] Length = 621 Score = 570 bits (1468), Expect = e-160, Method: Compositional matrix adjust. Identities = 293/620 (47%), Positives = 399/620 (64%), Gaps = 8/620 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D IVIGGGHAG EAA ++L T +IT TIG +SCNPAIGGL KG++VREIDAL Sbjct: 3 FDAIVIGGGHAGIEAALALSRLNFKTLMITQNLDTIGKLSCNPAIGGLAKGNMVREIDAL 62 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MGR+ D + IQFRVLN +GPAV+ PR QAD+ +Y+ + + Q+NLD+ Q V Sbjct: 63 GGEMGRIIDFSMIQFRVLNKSRGPAVQAPRAQADKLMYQTKAKETLERQDNLDLFQDTVV 122 Query: 126 GF--NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 F N+ +N I +V + + R S VVLTTGTFLRG I IG+ + GR+ + + L Sbjct: 123 DFLLNSMRNEIEGVVTERGNKFRSSVVVLTTGTFLRGKIFIGEYRADMGRLAEFSAYGLD 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + + F+ GRLKTGTPAR+ K++ + K E QF D +IPFSF K+ Q+ C +T Sbjct: 183 KTLLGLGFEMGRLKTGTPARIHKKSVDFSKMEVQFGDSDIIPFSFSNGKLDKSQLSCYVT 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH II EN+ S +YSG+I GPRYCPSIEDKIV+F +++ HQIF+EPEG NT+ Sbjct: 243 YTNKKTHEIISENMHLSPLYSGEIVGNGPRYCPSIEDKIVKFKDKDRHQIFIEPEGFNTE 302 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y NG+S++LPE IQ + I +I GLE I RPGYA+EYDYINP EL+P LE+K++ GL Sbjct: 303 EMYLNGLSSSLPENIQQKLINSIEGLEHAVITRPGYAVEYDYINPIELYPNLESKRVKGL 362 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F+AGQ NG++GYEEAAAQGL+AGIN+A + + +RT SYIGV+IDDL +KG EP Sbjct: 363 FIAGQTNGSSGYEEAAAQGLMAGINAALRLQNKKPMILTRTSSYIGVLIDDLVTKGTKEP 422 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R++LR D +D RL IG LG + E R R+ ++ LLK L Sbjct: 423 YRMFTSRAEHRLNLRHDTSDKRLIRIGYDLGLVDEERYSRYLFKESRVEEIKELLKQRRL 482 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 + K++ + + ++ Y L P S+ NL I P S +++E+++++ Y Sbjct: 483 SLKDVVDEQL---KKHVSKDFYHILKDPSISLDNLIKIDPSLSD-SKVILEQVELDVKYE 538 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y RQ K + E +P DF+Y + LS E +EK S ++P L QAS+I G+ Sbjct: 539 GYINRQKDLIKRLDNLELVKLPFDFNYEIVEGLSREAREKFSKIQPATLAQASRIPGIRS 598 Query: 604 AALNLLLIYIK--KNTVKLN 621 + +LLIY KN V +N Sbjct: 599 TDITVLLIYFSNPKNKVVIN 618 >gi|118594208|ref|ZP_01551555.1| glucose-inhibited division protein A [Methylophilales bacterium HTCC2181] gi|118439986|gb|EAV46613.1| glucose-inhibited division protein A [Methylophilales bacterium HTCC2181] Length = 631 Score = 570 bits (1468), Expect = e-160, Method: Compositional matrix adjust. Identities = 302/618 (48%), Positives = 400/618 (64%), Gaps = 12/618 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++G T L+TH T+G MSCNP+IGG+GKGHLV+EIDA+ Sbjct: 7 FDVIVVGGGHAGSEAALASARMGQKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEIDAM 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+M R D AGIQFR+LN KGPAVR R QADR LY+ A+++ + +Q++L + Q V Sbjct: 67 GGVMARATDIAGIQFRILNRSKGPAVRATRAQADRVLYKAAIRQFLENQKDLWLFQQSVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + + N IS +V Q VVLT GTFL G+IH+G GR GD S +L Sbjct: 127 DVSIKNNKISGVVTQSGIQFFSDNVVLTAGTFLGGLIHVGMESYKGGRAGDPSSETLAAK 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+DG++I + E+Q D FSF+ I + QI C IT Sbjct: 187 LKDLNLPVGRLKTGTPPRIDGRSIDYSLMEEQPGDLPTPRFSFIDPLIKHPEQIACWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TNL+TH II + S +Y+G I+ GPRYCPS+EDKI RF ++ HQ+F+EPEGLNT Sbjct: 247 TNLKTHDIIRSGLDRSPMYTGVIEGIGPRYCPSVEDKIHRFADKESHQVFIEPEGLNTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LP ++Q Q +R+I G+E +I+RPGYAIEYDY +P+ L +LETK I+GLF Sbjct: 307 VYPNGISTSLPFDVQLQLVRSIKGMESAHILRPGYAIEYDYYDPRALKASLETKAIAGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGLVAG N+A +S + SR +SY+GVMIDDL +KGV EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLVAGTNAALRSKGEEGWSPSRENSYMGVMIDDLITKGVSEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT LG I E + F K + LK++V+ Sbjct: 427 RMFTSRAEYRLLLREDNADLRLTERARTLGLICEHQWTNFNKKQESIKEEEKRLKNMVIR 486 Query: 485 SKNLSSTSISFKQD---GKT----RTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 SS SI KQ+ GK A++ L P+ S L + D LV E+++ Sbjct: 487 P---SSGSI-LKQEELFGKALDSEYKAFDLLKRPEVSYDKLMRLIDDEGAMGELVREQVE 542 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I + Y+ Y RQ E + K + + IP + DY ++ + E K+ LS+ KP + QAS+ Sbjct: 543 ILAKYSGYIVRQKAEIERNKGQMQTSIPSNMDYGAVHGIGIEAKQLLSLHKPETVHQASR 602 Query: 598 IEGMTPAALNLLLIYIKK 615 I G+TP+ +++LLI++KK Sbjct: 603 ISGITPSTISILLIHLKK 620 >gi|300940927|ref|ZP_07155453.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 21-1] gi|300454357|gb|EFK17850.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 21-1] Length = 629 Score = 570 bits (1468), Expect = e-160, Method: Compositional matrix adjust. Identities = 292/616 (47%), Positives = 398/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P + + E+++I+ Sbjct: 487 PSAEAAADVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFSPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKKQ 622 >gi|74314233|ref|YP_312652.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella sonnei Ss046] gi|123615766|sp|Q3YVP5|MNMG_SHISS RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|73857710|gb|AAZ90417.1| GldA [Shigella sonnei Ss046] gi|323167015|gb|EFZ52754.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella sonnei 53G] Length = 629 Score = 569 bits (1467), Expect = e-160, Method: Compositional matrix adjust. Identities = 292/616 (47%), Positives = 397/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+ G+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLVGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A + E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKKQ 622 >gi|241668754|ref|ZP_04756332.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254877285|ref|ZP_05249995.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254843306|gb|EET21720.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 627 Score = 569 bits (1467), Expect = e-160, Method: Compositional matrix adjust. Identities = 306/620 (49%), Positives = 408/620 (65%), Gaps = 8/620 (1%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 N +YDVIV+GGGHAG EAAA +A++GA T L+TH TIG MSCNPAIGG+GKGHLV+EI Sbjct: 4 NNTYDVIVVGGGHAGVEAAAASARIGAKTLLLTHNIDTIGQMSCNPAIGGIGKGHLVKEI 63 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DA+ G+M + D AGIQFR+LN +KGPAVR R QADR LY+ A+ + Q+NLD+ Q Sbjct: 64 DAMGGIMAKAIDMAGIQFRILNSRKGPAVRATRAQADRVLYKKAINSLLNDQQNLDIFQD 123 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 V E + + + + + VVLT GTFL G IHIG++ GR GD PSN+L Sbjct: 124 SVDDLVVENDTVCGAITKTGITFKSKKVVLTVGTFLGGKIHIGQVSKEGGRAGDQPSNAL 183 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITN-RQIEC 240 F RLKTGTP R+D +++ + + Q D FSF + KI + RQI C Sbjct: 184 AARLRALPFRVDRLKTGTPPRIDSRSVDFSVMDVQHGDTPTPFFSFFSKGKIEHPRQIPC 243 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH II N+ SA+YSG I+ GPRYCPSIEDK+VRF E++ HQIF+EPEGL Sbjct: 244 YITYTNSKTHEIITNNLDKSAMYSGLIEGIGPRYCPSIEDKVVRFAEKDRHQIFVEPEGL 303 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 N+ +YPNG+ST+LP E+Q ++IR+I G E IIRPGYAIEYD+ +P++L PTLETK I Sbjct: 304 NSIELYPNGLSTSLPFEVQCEYIRSIKGFENAFIIRPGYAIEYDFFDPRDLKPTLETKHI 363 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 LF AGQINGTTGYEEA AQGLVAGIN+A + +R++SY+GV+IDDL +KG Sbjct: 364 KNLFFAGQINGTTGYEEAGAQGLVAGINAAISIDSDKSWYPTRSNSYMGVLIDDLITKGT 423 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RL+ ++G + ++ Q+ F + +++K+ Sbjct: 424 KEPYRMFTSRAEYRLILREDNADLRLSDKACEIGLLNKQDQEFFINKKTAIDENIAMMKN 483 Query: 481 LVLTSKNLSSTSISFKQDGK-TR--TAYEFLSYPDFSIQNLFSICPDA--RKFSSLVIER 535 + + + + D K TR T ++ L P+ + L I PD + VIE+ Sbjct: 484 TWIGPQTQKARELEKFLDKKMTRESTLFDLLKRPELDYKKLQQI-PDTNLKLEDESVIEQ 542 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I + Y+ Y RQ + +I E + IP+ FDYS + LSNE+ +KLS KP L +A Sbjct: 543 IEISAKYSGYIERQSKDIAKILTLESKTIPESFDYSQVKGLSNEVLQKLSEQKPTTLGEA 602 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G+TPAA++LL IY+KK Sbjct: 603 SRIPGVTPAAVSLLTIYMKK 622 >gi|216264023|ref|ZP_03436017.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Borrelia afzelii ACA-1] gi|215980067|gb|EEC20889.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Borrelia afzelii ACA-1] Length = 621 Score = 569 bits (1467), Expect = e-160, Method: Compositional matrix adjust. Identities = 291/620 (46%), Positives = 401/620 (64%), Gaps = 8/620 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D IVIGGGHAG EAA ++L T +IT TIG +SCNPAIGGL KG++VREIDAL Sbjct: 3 FDAIVIGGGHAGIEAALAISRLNFKTLMITQNLDTIGKLSCNPAIGGLAKGNMVREIDAL 62 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MGR+ D + IQFRVLN +GPAV+ PR QAD+ +Y+ + + Q+NLD+ Q V Sbjct: 63 GGEMGRIIDFSMIQFRVLNKSRGPAVQAPRAQADKLMYQTKAKETLERQDNLDLFQDTVV 122 Query: 126 GF--NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 F N+ +N I +V + + R S VVLTTGTFLRG I IG+ + GR+ + + L Sbjct: 123 DFLLNSMRNEIEGVVTERGNKFRSSVVVLTTGTFLRGKIFIGEYRANMGRLAEFSAYGLD 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + + F+ GRLKTGTPAR+ K++ + KTE QF D +IPFSF K+ Q+ C +T Sbjct: 183 KTLLGLGFEMGRLKTGTPARIHRKSVDFSKTEVQFGDSDIIPFSFSNGKLDKSQLSCYVT 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II EN+ S +YSG+I GPRYCPSIEDKIV+F +++ HQIF+EPEG NT+ Sbjct: 243 YTNKRTHEIISENMHLSPLYSGEIVGNGPRYCPSIEDKIVKFKDKDRHQIFIEPEGFNTE 302 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y NG+S++LPE +Q + I +I GLE I RPGYA+EYDYINP EL+P+LE+K++ GL Sbjct: 303 EMYLNGLSSSLPENVQQKLINSIEGLEHAVITRPGYAVEYDYINPIELYPSLESKRVKGL 362 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F+AGQ NG++GYEEAAAQGL+AGIN+A + + +RT SYIGV+IDDL +KG EP Sbjct: 363 FIAGQTNGSSGYEEAAAQGLMAGINAALRLQNKKPMILTRTSSYIGVLIDDLVTKGTKEP 422 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R++LR D +D RL IG LG + E R ++ + ++ LLK L Sbjct: 423 YRMFTSRAEHRLNLRHDTSDKRLIKIGYDLGLVDEERYSKYLFKKRRVEEIKELLKQRRL 482 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 + K+++ + + + Y L P ++ NL I P S +++E+++++ Y Sbjct: 483 SLKDIADEQL---KKHVNKDFYHILKDPSINLDNLIKIDPSLSD-SKVILEQVELDIKYE 538 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y RQ K++ E +P DF+Y + LS E +EK S ++P L QAS+I G+ Sbjct: 539 GYINRQKDLIKKLHNLELVKLPFDFNYGIIEGLSREAREKFSKVQPATLAQASRIPGIRN 598 Query: 604 AALNLLLIYIK--KNTVKLN 621 + +L IY KN V LN Sbjct: 599 TDITVLFIYFSNPKNKVVLN 618 >gi|24115044|ref|NP_709554.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella flexneri 2a str. 301] gi|30064954|ref|NP_839125.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella flexneri 2a str. 2457T] gi|81170577|sp|Q83PJ6|MNMG_SHIFL RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|205831561|sp|Q0SYT5|MNMG_SHIF8 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|24054304|gb|AAN45261.1| glucose-inhibited division protein GidA [Shigella flexneri 2a str. 301] gi|30043215|gb|AAP18936.1| glucose-inhibited division protein GidA [Shigella flexneri 2a str. 2457T] gi|281603139|gb|ADA76123.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Shigella flexneri 2002017] gi|313647643|gb|EFS12091.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella flexneri 2a str. 2457T] gi|332750750|gb|EGJ81158.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella flexneri 4343-70] gi|332750896|gb|EGJ81302.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella flexneri K-671] gi|332751672|gb|EGJ82070.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella flexneri 2747-71] gi|332764002|gb|EGJ94239.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella flexneri 2930-71] gi|332997296|gb|EGK16912.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella flexneri K-218] gi|333013465|gb|EGK32836.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella flexneri K-304] Length = 629 Score = 569 bits (1467), Expect = e-160, Method: Compositional matrix adjust. Identities = 292/616 (47%), Positives = 397/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR YR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVRYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASLHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A + E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQISGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKKQ 622 >gi|42525229|ref|NP_970609.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bdellovibrio bacteriovorus HD100] gi|81170524|sp|Q6MGL6|MNMG_BDEBA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|39577440|emb|CAE81263.1| glucose inhibited division protein A [Bdellovibrio bacteriovorus HD100] Length = 642 Score = 569 bits (1467), Expect = e-160, Method: Compositional matrix adjust. Identities = 298/622 (47%), Positives = 398/622 (63%), Gaps = 13/622 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M N+ YDVIV+G GHAG EA +A+LG +T ++T T IG MSCNP+IGGL KGH+VR Sbjct: 1 MANKKYDVIVVGAGHAGIEACLSSARLGLNTLMVTTNTDRIGYMSCNPSIGGLAKGHMVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EID L G MG AD IQ++ LN KGPAVRG R Q D+ LY + + +Q NL+V+ Sbjct: 61 EIDVLGGQMGVAADETCIQYKRLNASKGPAVRGTRVQNDKHLYSQFQKEALYNQPNLEVL 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 QGEV EK++ +V+QD S I ++TTGTF+ GV+HIG + GR+GD PS Sbjct: 121 QGEVKRLILEKDLCVGVVLQDGSEIFGKATIITTGTFMNGVMHIGLRQEAGGRVGDQPSI 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNRQIE 239 L + +F F+ RLKTGTPARL +I W KT Q DE++ PFSF + DK+ Q+ Sbjct: 181 GLSDQLAQFGFEVKRLKTGTPARLLKDSIDWSKTIPQAGDEKVYPFSFRSSDKLKLPQVL 240 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +TRT ETH II N+ S +Y G I+ GPRYCPSIEDKI RF ER HQ FLEPEG Sbjct: 241 CYLTRTTEETHDIIRGNLDKSPMYCGIIEGVGPRYCPSIEDKITRFAERTSHQTFLEPEG 300 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L+TD++Y GIST+LPE++Q +F++TIPGLE V + R GYA+EYDYI P +++ LET+ Sbjct: 301 LSTDLIYLQGISTSLPEDVQDRFLKTIPGLENVKVARYGYAVEYDYIEPTQIWHRLETRT 360 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I LFLAGQINGT+GYEEAAAQGL+AGIN+A + R +Y+GVMIDDL +KG Sbjct: 361 IRQLFLAGQINGTSGYEEAAAQGLIAGINAAHSILGREEFILGRDQAYMGVMIDDLVTKG 420 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAE+R+ LR DN +RL+ +G KLG + + + L LK Sbjct: 421 TREPYRMFTSRAEHRLVLREDNTIDRLSDLGRKLGLVSAESFELLTNLRERRQVLHDRLK 480 Query: 480 SLVL-TSKNLSS--TSISFKQDGKTRTAYEFLSYPDFSIQNL----FSICPDARKFSSLV 532 + VL +K++ + +I K+ T E L P+ + +L F + PD V Sbjct: 481 NTVLYPTKDIQAILATIPTPAMSKSLTFEELLRRPELTSSHLELLNFELDPDPN-----V 535 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 +E ++IE Y+ Y RQM + K E+ L+P D Y+ + LSNE K+KL +KP L Sbjct: 536 VEPVEIEVKYSGYVKRQMDLIVQSKRLEEMLLPDDLAYAEIRGLSNEEKDKLLRVKPRTL 595 Query: 593 LQASKIEGMTPAALNLLLIYIK 614 QA +I G+ P+A+ ++I++K Sbjct: 596 GQAQRISGVNPSAIQAIMIHLK 617 >gi|153948674|ref|YP_001403128.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Yersinia pseudotuberculosis IP 31758] gi|166989740|sp|A7FPF0|MNMG_YERP3 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|152960169|gb|ABS47630.1| glucose-inhibited division protein A [Yersinia pseudotuberculosis IP 31758] Length = 629 Score = 569 bits (1467), Expect = e-160, Method: Compositional matrix adjust. Identities = 297/616 (48%), Positives = 399/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYRLA++ + +Q NL + Q +V Sbjct: 67 GGLMAKATDLAGIQFRILNASKGPAVRATRAQADRVLYRLAVRTALENQPNLMIFQQQVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS SL Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPSISLSQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +TI + + Q D + FSF+ + + Q+ C IT Sbjct: 187 LRELPLRVNRLKTGTPPRIDARTIDFSQLTPQLGDTPIPVFSFLGNAEQHPEQMACHITY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNSHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ GLE IIRPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMKGLENARIIRPGYAIEYDFFDPRDLKPTLESKYIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+ R +N+ D R ++Y+GV++DDL++ G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAGRFANEEDGWSPRRDEAYLGVLVDDLSTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL- 483 RMFTSRAEYR+ LR DNAD RLT G KLG + + R F++ +++ R L+ + + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTETGRKLGLVDDIRWAHFSQKVEQIEKERQRLRDIWVH 486 Query: 484 -TSKNLSSTSISFKQD-GKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 S+N+S + K K E L P+ + L S+ + ++++I+ Sbjct: 487 PHSENVSEINALLKAPLSKEANGEELLRRPEIDYRLLTSLTSFGPALTDPQSADQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P D DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYITRQQEEIEKQLRNENTLLPVDLDYQQVSGLSNEVIAKLNDHKPSSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 ITPAAISILLVWLKKQ 622 >gi|329894823|ref|ZP_08270623.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [gamma proteobacterium IMCC3088] gi|328922717|gb|EGG30051.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [gamma proteobacterium IMCC3088] Length = 630 Score = 569 bits (1467), Expect = e-160, Method: Compositional matrix adjust. Identities = 290/617 (47%), Positives = 394/617 (63%), Gaps = 5/617 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 +++DVIVIGGGHAG EAA +A++G +T LITH T+G MSCNPAIGG+GK HLVREID Sbjct: 5 QTFDVIVIGGGHAGTEAALASARMGCATLLITHSVDTLGQMSCNPAIGGIGKSHLVREID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D AGIQFRVLN +KGPAVR R QADR LY+ A+++ + Q NL + Q Sbjct: 65 ALGGAMAEATDEAGIQFRVLNSRKGPAVRATRAQADRVLYKAAIRKRLEQQSNLWIFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + + + ++ Q + VVLT GTFL G IHIG + GR GD + +L Sbjct: 125 VDDLIIKGDRVEGVITQMGLRFKAPAVVLTAGTFLAGKIHIGLEQSQGGRAGDPAAMTLA 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGI 242 + RLKTGTP R+D +T+ + ++Q+ D S M T+ +Q+ C I Sbjct: 185 ARLRDLNLRVDRLKTGTPPRIDARTVDFSVMQEQWGDTPEPVMSLMGSAATHPKQMCCWI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II +N+ S ++SG I+ GPRYCPSIEDKI RF +++ HQ+F+EPEGL T Sbjct: 245 THTNAQTHEIISQNLDRSPLFSGVIEGTGPRYCPSIEDKIHRFADKDSHQVFVEPEGLTT 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + +YPNGIST+LP ++Q+ +R+I G E +I+RPGYAIEYD+ +P+ L TLETK I G Sbjct: 305 NELYPNGISTSLPFDVQYAVVRSIKGFENAHIVRPGYAIEYDFFDPRGLKHTLETKAIDG 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEA AQGL+AG+N+ + +R ++YIGVMIDDL + G E Sbjct: 365 LFFAGQINGTTGYEEAGAQGLIAGLNAGLRVKGKPAWYPTRKEAYIGVMIDDLVTHGTAE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT IG +LG + + R + ++ +++ L S Sbjct: 425 PYRMFTSRAEYRLMLREDNADQRLTAIGRQLGLVNDLRWQDYSTKMEQLAAEHERLASTY 484 Query: 483 LTSKNLSS---TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + +K + IS K + + + L P+ ++ + A + V ++++IE Sbjct: 485 IQAKTPQAEKVEQISGKPLTREYSLLDLLKRPELHYHDIADLKGAACERLD-VAQQVEIE 543 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 S YA Y RQ E + + + + IP DFDY S+ LSNEL+ KL + P L QA +I Sbjct: 544 SKYAGYIARQEQEIQRMAGQAETQIPSDFDYQSVSGLSNELRSKLEDVNPLTLDQAGRIA 603 Query: 600 GMTPAALNLLLIYIKKN 616 GMTPAAL+LL IY+KK+ Sbjct: 604 GMTPAALSLLAIYLKKH 620 >gi|222056912|ref|YP_002539274.1| glucose inhibited division protein A [Geobacter sp. FRC-32] gi|221566201|gb|ACM22173.1| glucose inhibited division protein A [Geobacter sp. FRC-32] Length = 624 Score = 569 bits (1467), Expect = e-160, Method: Compositional matrix adjust. Identities = 298/618 (48%), Positives = 399/618 (64%), Gaps = 9/618 (1%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 ++ YDVIV+GGGHAGCEAA AA++G T L+T I MSCNPAIGGL KGHLV+EI Sbjct: 5 DKEYDVIVVGGGHAGCEAALAAARMGCETLLLTINLDAIALMSCNPAIGGLAKGHLVKEI 64 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G M + DA GIQFR+LN KKGPAVR R QAD++ YRL M+R + QENL + Q Sbjct: 65 DALGGEMAKNIDATGIQFRILNTKKGPAVRASRAQADKQQYRLRMKRVLEEQENLHLKQA 124 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 EV + + + + TV+LTTGTF+RG+IHIG + GR GD PS L Sbjct: 125 EVTALVMDGETVVGVDTKAGVRHMAKTVILTTGTFMRGLIHIGLVHYSGGRAGDLPSVGL 184 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGI 242 ++ + FD GRLKTGTPARLD +TI + + E Q+ D++ IPFSF T++I N+Q+ C I Sbjct: 185 SDNLRELGFDVGRLKTGTPARLDSRTIDFGRLEAQYGDDQPIPFSFSTERILNKQVPCHI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 TN +H II + S +YSG I+ GPRYCPSIEDK+VRF E++ HQ F+EPEGL+T Sbjct: 245 AYTNERSHDIIRSGLDRSPLYSGIIEGVGPRYCPSIEDKVVRFPEKDRHQTFIEPEGLDT 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 VYP+G+ST+LP ++Q +F R+I GLE+V I+RP YAIEYDY++P +L +LETK Sbjct: 305 VEVYPSGLSTSLPIDVQWKFYRSIAGLERVEIMRPAYAIEYDYVDPIQLHASLETKPARN 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQINGT+GYEEAAAQGL+AGIN+A + + + R D+YIGVMIDDL + G E Sbjct: 365 LYHAGQINGTSGYEEAAAQGLLAGINAALRVQGREPLILGRNDAYIGVMIDDLVTMGSKE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL- 481 PYRMFTSRAEYR+ LR DNAD RL G ++G + R + + ++++ ++ L+ L Sbjct: 425 PYRMFTSRAEYRLLLREDNADLRLRERGYEIGLV---RDEEYGIFLRKKEMIKEELQRLR 481 Query: 482 ---VLTSKNLSSTSISFKQDG--KTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 ++ S+ F G T + L PD + +L I + + V E++ Sbjct: 482 QEKLIPSQVDDDFLEDFDLKGMQNALTYEQLLRRPDVTSSDLSRIDEKIMETPADVREQV 541 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y Y RQ+ + K E IP+D Y L LS E++EKL KP L QAS Sbjct: 542 EIQIKYQGYIDRQLEQVGRAKKLEHTKIPQDMQYMGLSGLSAEVQEKLHKFKPDTLGQAS 601 Query: 597 KIEGMTPAALNLLLIYIK 614 +I G+TPAA+ +L I +K Sbjct: 602 RIPGVTPAAITILSIALK 619 >gi|309972266|gb|ADO95467.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Haemophilus influenzae R2846] Length = 629 Score = 569 bits (1467), Expect = e-160, Method: Compositional matrix adjust. Identities = 298/623 (47%), Positives = 393/623 (63%), Gaps = 17/623 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIGGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DA Sbjct: 6 TYDVIVIGGGHAGTEAALAPARMGFKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 + GLM AD AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q E Sbjct: 66 MGGLMAHAADKAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIFQQEA 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E++ ++ + + R +VVLT GTFL G IHIG GR GD S +L + Sbjct: 126 TDILIEQDRVTGVSTKMGLTFRAKSVVLTAGTFLAGKIHIGLENYEGGRAGDPASVNLSH 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 RLKTGTP R+D +TI +D KQ D L FSFM + +QI C IT Sbjct: 186 RLRDLGLRVDRLKTGTPPRIDARTINFDILAKQHGDAVLPVFSFMGSVDDHPQQIPCYIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL ++ Sbjct: 246 HTNEQTHEVIRNNLDRSPMYTGVIEGIGPRYCPSIEDKVMRFSDRNSHQIYLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNGIST+LP ++Q + ++ GLE I++PGYAIEYDY +P++L PTLETK ISGL Sbjct: 306 EVYPNGISTSLPFDVQMGIVNSMKGLENARIVKPGYAIEYDYFDPRDLKPTLETKSISGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ + D R SY GV++DDL + G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGINAGLYVQEKDAWYPRRDQSYTGVLVDDLCTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+FTSRAEYR+ LR DNAD RLTPI +LG I + R RF K ++ R L+++ L Sbjct: 426 YRVFTSRAEYRLLLREDNADIRLTPIAHELGLIDDARWARFNKKMENIEQERQRLRNIWL 485 Query: 484 ---------TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VI 533 +K L S + + + + L P+ + L S+ P + Sbjct: 486 HPRSEYLEEANKVLGSPLV------REASGEDLLRRPEMTYDILTSLTPYKPAMEDKEAV 539 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I Y Y Q E ++ K E IP +FDYS + LSNE++ KL +P ++ Sbjct: 540 EQVEIAIKYQGYIEHQQEEIEKQKRHENTAIPANFDYSKVSGLSNEVRAKLEQHRPVSIG 599 Query: 594 QASKIEGMTPAALNLLLIYIKKN 616 QAS+I G+TPAA++++L+ +KK Sbjct: 600 QASRISGITPAAISIILVNLKKQ 622 >gi|332084593|gb|EGI89787.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella boydii 5216-82] Length = 629 Score = 569 bits (1466), Expect = e-160, Method: Compositional matrix adjust. Identities = 292/616 (47%), Positives = 397/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+D L Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDVL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFRVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A + E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKKQ 622 >gi|149925397|ref|ZP_01913661.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Limnobacter sp. MED105] gi|149825514|gb|EDM84722.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Limnobacter sp. MED105] Length = 650 Score = 569 bits (1466), Expect = e-160, Method: Compositional matrix adjust. Identities = 300/622 (48%), Positives = 397/622 (63%), Gaps = 12/622 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA+ G+ T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALAAARAGSKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGAMAIATDEAGIQFRILNGSKGPAVRATRAQADRVLYRQAIRTRLENQHNLSIFQQSVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + + + V Q + VVLT GTFL G IH+G AGR GD PS L Sbjct: 127 DLLLDGDRVCGAVTQVGLKFKAKAVVLTAGTFLNGKIHVGLQNYSAGRAGDPPSIGLGMR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQIECGIT 243 + GRLKTGTP R+DG++I + ++Q D +P FS++ + + RQ+ C IT Sbjct: 187 LQEMKLPQGRLKTGTPPRIDGRSIDFSVMQEQPGDLDPVPVFSYLGNTAMHPRQLPCWIT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T+ Sbjct: 247 HTNQNTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFADKESHQIFLEPEGLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNG+ST+LP ++Q + +I GLE I+RPGYAIEYDY +P+ L TLETK I GL Sbjct: 307 EYYPNGVSTSLPFDVQLNLLHSIKGLENAYIMRPGYAIEYDYFDPRALKTTLETKAIEGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+A D R ++Y+GV++DDLTSKGV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGVNAALLVQGKDQWTPRRDEAYLGVLVDDLTSKGVAEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLTPIG KLG + + R K F++ + + L+S + Sbjct: 427 YRMFTSRAEYRLSLREDNADQRLTPIGRKLGLVDDIRWKAFSEKREAVELEKQRLRSTWI 486 Query: 484 TSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFS-------SLVI 533 K ++ + K + Y+ L PD S Q+L ++ + + + +I Sbjct: 487 NPKIVAQAEAERVLHKGIDREYNLYDLLKRPDVSYQDLSTLSKENGDLALSNPLEQTDLI 546 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 +L+IE YA Y RQ E + E +P DFDYS + LS E+++KL+ KP + Sbjct: 547 SQLEIEVKYAGYVLRQQAEVERGAGNESIRLPADFDYSGVNGLSKEVQQKLNTHKPETIG 606 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QA +I+G+TPAA++LLL+++KK Sbjct: 607 QAGRIQGVTPAAISLLLVHLKK 628 >gi|332995988|gb|EGK15615.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella flexneri VA-6] Length = 629 Score = 569 bits (1466), Expect = e-160, Method: Compositional matrix adjust. Identities = 292/616 (47%), Positives = 397/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR YR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVRYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASLHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A + E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKKQ 622 >gi|145629760|ref|ZP_01785555.1| glucose-inhibited division protein A [Haemophilus influenzae 22.1-21] gi|145638508|ref|ZP_01794117.1| glucose-inhibited division protein A [Haemophilus influenzae PittII] gi|144977999|gb|EDJ87783.1| glucose-inhibited division protein A [Haemophilus influenzae 22.1-21] gi|145272103|gb|EDK12011.1| glucose-inhibited division protein A [Haemophilus influenzae PittII] gi|309750012|gb|ADO79996.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Haemophilus influenzae R2866] Length = 629 Score = 569 bits (1466), Expect = e-160, Method: Compositional matrix adjust. Identities = 298/623 (47%), Positives = 393/623 (63%), Gaps = 17/623 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIGGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DA Sbjct: 6 TYDVIVIGGGHAGTEAALAPARMGFKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 + GLM AD AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q E Sbjct: 66 MGGLMAHAADKAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIFQQEA 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 +++ ++ + + R +VVLT GTFL G IHIG GR GD S +L + Sbjct: 126 TDILIKQDRVTGVSTKMGLTFRAKSVVLTAGTFLAGKIHIGLENYEGGRAGDPASVNLSH 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 RLKTGTP R+D +TI +D KQ D L FSFM + +QI C IT Sbjct: 186 RLRDLGLRVDRLKTGTPPRIDARTINFDILAKQHGDAVLPVFSFMGSVDDHPQQIPCYIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL ++ Sbjct: 246 HTNEQTHEVIRNNLDRSPMYTGVIEGIGPRYCPSIEDKVMRFSDRNSHQIYLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNGIST+LP ++Q + ++ GLE I++PGYAIEYDY +P++L PTLETK ISGL Sbjct: 306 EVYPNGISTSLPFDVQMGIVNSMKGLENARIVKPGYAIEYDYFDPRDLKPTLETKSISGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ + D R SY GV++DDL + G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGINAGLYVQEKDAWYPRRDQSYTGVLVDDLCTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+FTSRAEYR+ LR DNAD RLTPI +LG I E R RF + ++ R L+S+ L Sbjct: 426 YRVFTSRAEYRLLLREDNADIRLTPIAHELGLIDEARWARFNQKMENIEQERQRLRSIWL 485 Query: 484 ---------TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VI 533 +K L S + + + + L P+ + L S+ P + Sbjct: 486 HPRSEYLEEANKVLGSPLV------REASGEDLLRRPEMTYDILTSLTPYKPAMEDKEAV 539 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I Y Y Q E ++ K E IP +FDYS + LSNE++ KL +P ++ Sbjct: 540 EQVEIAIKYQGYIEHQQEEIEKQKRHENTAIPANFDYSKVSGLSNEVRAKLEQHRPVSIG 599 Query: 594 QASKIEGMTPAALNLLLIYIKKN 616 QAS+I G+TPAA++++L+ +KK Sbjct: 600 QASRISGITPAAISIILVNLKKQ 622 >gi|194431209|ref|ZP_03063502.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella dysenteriae 1012] gi|194420664|gb|EDX36740.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella dysenteriae 1012] gi|332084728|gb|EGI89914.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella dysenteriae 155-74] Length = 629 Score = 568 bits (1465), Expect = e-160, Method: Compositional matrix adjust. Identities = 292/616 (47%), Positives = 398/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q +L + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPDLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFRVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVICSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A + E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKKQ 622 >gi|114332389|ref|YP_748611.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Nitrosomonas eutropha C91] gi|122312971|sp|Q0ADD6|MNMG_NITEC RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|114309403|gb|ABI60646.1| glucose inhibited division protein A [Nitrosomonas eutropha C91] Length = 641 Score = 568 bits (1465), Expect = e-160, Method: Compositional matrix adjust. Identities = 290/624 (46%), Positives = 401/624 (64%), Gaps = 9/624 (1%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 +R +D+IV+GGGHAG EAA AA++G T L+T T+G MSCNP+IGG+GKGHLV+EI Sbjct: 4 SRDFDIIVVGGGHAGTEAALAAARMGQKTLLLTQNLDTLGQMSCNPSIGGIGKGHLVKEI 63 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G M D AGIQFR LN KGPAVR R QADR LYR A+++ + +Q NL ++Q Sbjct: 64 DALGGAMAAAIDEAGIQFRTLNSSKGPAVRATRAQADRVLYRQAIRKRLEAQPNLLILQS 123 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 V + I+ + VVLT GTFL G+ H+G AGR GD S L Sbjct: 124 TVDDLLLLDDKITGVATHLGITFSARAVVLTVGTFLGGLAHVGDRNFQAGRAGDPASIRL 183 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECG 241 + + + GRLKTGTP R+D +TI + +Q DE + FSF+ + + RQ+ C Sbjct: 184 AHRLREMNLSVGRLKTGTPPRIDARTIDFQFLREQPGDEPIPTFSFLGNTAQHPRQVSCW 243 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +TRTN +TH II + HS +Y+G I+ GPRYCPSIEDK+VRF +R+ H +FLEPEGL Sbjct: 244 MTRTNEKTHEIIRAGLDHSPLYTGKIEGIGPRYCPSIEDKVVRFSDRDSHTVFLEPEGLE 303 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T +YPNGIST+L E+Q + +R+I GLE +I RPGYAIEYDY +P+ L +LETK I Sbjct: 304 TSEIYPNGISTSLSFEVQVELVRSIAGLENAHITRPGYAIEYDYFDPRALKRSLETKAID 363 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQINGTTGYEEAAAQGL+AG+N++ K + + C SR ++Y+GV++DDL ++GV Sbjct: 364 GLFFAGQINGTTGYEEAAAQGLLAGLNASLKIKEQESWCPSRDEAYLGVLVDDLVTRGVT 423 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQ-----KRFAKYIQEYNFLRS 476 EPYRMFTSRAE+R+ LR DNAD RLT G + G + E+R KR A ++ R+ Sbjct: 424 EPYRMFTSRAEFRLQLREDNADMRLTEAGHQFGLVDEKRWQIFAAKREAIETEKARLRRT 483 Query: 477 LLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICP-DARKFSSLVIER 535 + + VL L + S + D ++ + YE L P S L S+ ++ + ++ Sbjct: 484 WVPAGVL--HKLQTLQTSDQSDDRSYSLYELLRRPGISYTELVSLSEVESSMIDGRIAQQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 L+I+ Y Y RQ E E ++PK+ DYS++ LSNE+ +KL+ +P + QA Sbjct: 542 LEIDVKYEGYVERQRQEVVRHTQHETMVLPKNLDYSTVRGLSNEVTQKLNQHQPETIGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTVK 619 ++I G+TPAA++LLL+++K+ + Sbjct: 602 ARISGITPAAISLLLVHLKRGMAR 625 >gi|332998035|gb|EGK17640.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella flexneri K-272] gi|333013715|gb|EGK33080.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella flexneri K-227] Length = 629 Score = 568 bits (1465), Expect = e-160, Method: Compositional matrix adjust. Identities = 292/616 (47%), Positives = 397/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR YR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVRYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWVRFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A + E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDYKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKKQ 622 >gi|257455888|ref|ZP_05621107.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enhydrobacter aerosaccus SK60] gi|257446736|gb|EEV21760.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enhydrobacter aerosaccus SK60] Length = 628 Score = 568 bits (1465), Expect = e-160, Method: Compositional matrix adjust. Identities = 302/615 (49%), Positives = 386/615 (62%), Gaps = 6/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GK HLVRE+DAL Sbjct: 7 YDVIVIGGGHAGTEAALAAARMGQQTLLLTHNIETLGQMSCNPAIGGIGKSHLVREVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D AGIQFRVLN +KG AVR R QADR LY+ A++ + +Q NLD+ Q Sbjct: 67 GGAMALATDKAGIQFRVLNSRKGAAVRATRAQADRILYKAAIRYTLENQPNLDIFQQAAD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E ++V Q C VVLT+GTFL G IHIG GR GD PS L + Sbjct: 127 DILVENGKAVAVVTQSGIEFACGAVVLTSGTFLGGTIHIGLENHKGGRAGDPPSIRLADR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGITR 244 + GRLKTGTP R+D +T+ + Q D L S++ D + RQI C IT Sbjct: 187 LRELKLPVGRLKTGTPPRIDARTVDFSVMTVQPGDTPLPVMSYLGDVSMHPRQINCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II + S +YSG I+ GPRYCPSIEDKI RF +++ HQIF+EPEGL T Sbjct: 247 TNERTHDIIRSGLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKDSHQIFIEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L P+LETK I LF Sbjct: 307 LYPNGISTSLPFDIQLALVRSMKGLENAHILRPGYAIEYDYFDPQNLKPSLETKSIDNLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQG++AG+N+AR++ LD R +YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGILAGLNAARRTQGLDAWTPRRDQAYIGVLVDDLITHGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG LG + + R + ++ + + L+SL T Sbjct: 427 RMFTSRAEYRLLLREDNADQRLTEIGRDLGLVDDARWQVYSDKMTAIEQETARLRSLWAT 486 Query: 485 SKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 N S K K A + L P+ S ++ + S+ V E+++I Sbjct: 487 PTNTLGQSFINKTGEVLTKENNALDLLKRPNVSFDDISELT--ESPVSAEVGEQIEIGVK 544 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ +E ++K E LIP DF Y + LSNE+ +KL ++P L QAS+I G+ Sbjct: 545 YAGYIDRQQVEIGQMKKLEHTLIPDDFTYHDISGLSNEIVQKLEKVRPTTLAQASRISGV 604 Query: 602 TPAALNLLLIYIKKN 616 TPAA+ LL + IKK+ Sbjct: 605 TPAAVQLLAMMIKKS 619 >gi|296284830|ref|ZP_06862828.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Citromicrobium bathyomarinum JL354] Length = 619 Score = 568 bits (1465), Expect = e-160, Method: Compositional matrix adjust. Identities = 281/612 (45%), Positives = 384/612 (62%), Gaps = 5/612 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 Y +IVIGGGHAG EAA VAA++G L+T S IG+MSCNPAIGGLGKGHLVRE+DA Sbjct: 4 YPIIVIGGGHAGVEAACVAARMGVRVGLVTMDASKIGAMSCNPAIGGLGKGHLVREVDAF 63 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DG++GR ADA I +R+LN KG AV GPR QADR+L+ A++ ++ +E LDVI GE A Sbjct: 64 DGVLGRAADAGAIHYRMLNRSKGSAVWGPRVQADRKLFGAAVRAQVAGEETLDVIAGEAA 123 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + ++ + + + I C +L TGTFL GV+ G+ GR+ + + L Sbjct: 124 ALVLDGERVAGVELAGGTRIGCEAAILCTGTFLGGVLFRGEETFVGGRVREGSAARLAAQ 183 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + RLKTGTP RLDG+TI W + ++Q +D + S ++ N QI C ITRT Sbjct: 184 LREAALPMARLKTGTPPRLDGRTIDWSRLDEQPSDPEVWTMSPLSRGRANPQIFCAITRT 243 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N H II N+ S +YSG I + GPRYCPSIEDKI RFG+R+GHQIFLEPEGL+T +V Sbjct: 244 NARAHEIIRANLSRSPLYSGAIGAQGPRYCPSIEDKIDRFGDRDGHQIFLEPEGLDTPLV 303 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YPNGIST+LP ++Q F+R I GLE+V ++ PGYA+EYD+++P+ L L+ + + GL+ Sbjct: 304 YPNGISTSLPADVQEDFLRAIDGLEQVRVVEPGYAVEYDHVDPRSLDRWLQMRSLPGLYC 363 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAAAQGLVAG+ +A D R +SYI VM+DDLT GV EPYR Sbjct: 364 AGQINGTTGYEEAAAQGLVAGLRAASSVLGRDAPALDRANSYIAVMVDDLTLHGVTEPYR 423 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 M T+RAEYR+ LR +NA RLTP+ +++GC+ E R F + S L Sbjct: 424 MLTARAEYRLRLRANNASTRLTPLAIEVGCVHEERGAWFEARAAARADVESALAE-DHGP 482 Query: 486 KNLSSTSISFKQDGKTRTAYEFLSYP--DFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 + + D + ++ +P D S + P R+ ++E + + YA Sbjct: 483 AQMRALGFGATDDAGRQPLRDWTRFPGIDLSALQYAGLVP--RETDPALLEEIGEDLHYA 540 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y RQ E +E++ E+ + DF +S +P LSNE+ E+LS +P +L QA ++ G+TP Sbjct: 541 PYIARQDAELRELRANEQVRLAPDFPFSQVPGLSNEMVERLSRARPDSLAQAGRVAGITP 600 Query: 604 AALNLLLIYIKK 615 AA+ LL+Y +K Sbjct: 601 AAMAALLVYARK 612 >gi|187732565|ref|YP_001882422.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella boydii CDC 3083-94] gi|238691693|sp|B2TUN4|MNMG_SHIB3 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|187429557|gb|ACD08831.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella boydii CDC 3083-94] Length = 629 Score = 568 bits (1464), Expect = e-160, Method: Compositional matrix adjust. Identities = 292/616 (47%), Positives = 397/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +TI + +Q + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGGNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A + E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKKQ 622 >gi|113461841|ref|YP_719910.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Haemophilus somnus 129PT] gi|123327492|sp|Q0I5W4|MNMG_HAES1 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|112823884|gb|ABI25973.1| glucose-inhibited division protein A [Haemophilus somnus 129PT] Length = 629 Score = 568 bits (1464), Expect = e-160, Method: Compositional matrix adjust. Identities = 300/616 (48%), Positives = 396/616 (64%), Gaps = 5/616 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIGGGHAG EAA A++ T L+TH T+G MSCNPAIGG+GKGHLV+EIDA Sbjct: 6 NYDVIVIGGGHAGTEAALATARMKLKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 + GLM AD AGIQFR LN KGPAVR R QADR LYR ++ + +Q NLD+ Q EV Sbjct: 66 MGGLMATAADKAGIQFRTLNSSKGPAVRATRAQADRVLYRQVVRIALENQPNLDIFQQEV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 EK+ ++ I + R +VVLT GTFL G IHIG GR GD S +L Sbjct: 126 TDIILEKDSVTGIETKMGLKFRAKSVVLTAGTFLAGKIHIGLENYAGGRAGDPASVNLAK 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQIECGIT 243 + RLKTGTP R+D +TI +D KQ+ DE+L FSFM + + QI C IT Sbjct: 186 KLRDLNLRVNRLKTGTPPRIDARTINFDILAKQYGDEKLPVFSFMGSVEQHPEQIPCYIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I +N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL ++ Sbjct: 246 HTNDQTHDVIRKNLDRSPMYTGVIEGIGPRYCPSIEDKVIRFSDRNSHQIYLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNGIST+LP ++Q + + ++ GLEK I++PGYAIEYDY +P++L TLETK ISGL Sbjct: 306 EVYPNGISTSLPFDVQMKIVNSMKGLEKARIVKPGYAIEYDYFDPRDLKSTLETKAISGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ + + R +YIGV++DDL + G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGINAGLFVQEKESWFPRRDQAYIGVLVDDLCTVGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+FTSRAEYR+ LR DNAD RLT I KLG I + R RF + ++ R L+S+ L Sbjct: 426 YRVFTSRAEYRLLLREDNADIRLTSIARKLGLIDDIRWARFNQKMENIELERQRLRSIWL 485 Query: 484 T--SKNLSSTSISFKQDG-KTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VIERLQIE 539 S+ L+ + K + + L P+ + Q L ++ P +E+++I Sbjct: 486 HPRSEYLNEANEILKSPLIREVNGEDLLRRPEINYQILTALTPFKPAMEDKEAVEQVEIA 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y Q E + K E IP +FDY ++ LSNE+ KL +P ++ QAS+I Sbjct: 546 IKYQGYIEHQQEEIERQKRHENTAIPANFDYKNISGLSNEVCAKLEQYRPISIGQASRIS 605 Query: 600 GMTPAALNLLLIYIKK 615 G+TPAA+++LL+ +KK Sbjct: 606 GITPAAISILLVNLKK 621 >gi|294638360|ref|ZP_06716613.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Edwardsiella tarda ATCC 23685] gi|291088613|gb|EFE21174.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Edwardsiella tarda ATCC 23685] Length = 629 Score = 568 bits (1464), Expect = e-160, Method: Compositional matrix adjust. Identities = 292/621 (47%), Positives = 391/621 (62%), Gaps = 15/621 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMASARMGRQTLLLTHNIDTLGHMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D GIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAQAIDKGGIQFRILNGSKGPAVRATRAQADRVLYRQAVRMALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + Q R VVLT GTFL G IHIG GR GD PS L + Sbjct: 127 DLIVENDRVVGAITQMGLKFRAKAVVLTVGTFLNGKIHIGLENYSGGRAGDPPSIGLAHR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP RLD +TI +Q D FSF+ D + RQ+ C IT Sbjct: 187 LRELPLRVNRLKTGTPPRLDARTIDLAALAQQHGDNPAPVFSFLGDASQHPRQLPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNERTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q +R++ G++ I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMAIVRSMDGMQNARIVRPGYAIEYDFFDPRDLKPTLESKYIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+ R + +L+ R +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAGRCAAELEGWAPRRDQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL- 483 RMFTSRAEYR+ LR DNAD RLTPIG +LG + + R F + ++ R L+ + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTPIGRELGLVDDERWAHFNRKLENMERERQRLRDTWVH 486 Query: 484 -------TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIER 535 T L T +S + +G+ + L P+ L S+ P A E+ Sbjct: 487 PQAEQAATINALLKTPLSREANGE-----DLLRRPEMDYAALTSLAPFAPPLEDRQAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y RQ E ++ E L+P D DY + LSNE+ KL+ KP ++ QA Sbjct: 542 VEIQVKYQGYIARQQDEIEKQMRNEHTLLPADLDYRQVNGLSNEVIAKLNDHKPSSIGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKKN 616 S+I G+TPAA+++LL+++KK Sbjct: 602 SRISGITPAAISILLVWLKKQ 622 >gi|157144377|ref|YP_001451696.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Citrobacter koseri ATCC BAA-895] gi|166222924|sp|A8ACP7|MNMG_CITK8 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|157081582|gb|ABV11260.1| hypothetical protein CKO_00081 [Citrobacter koseri ATCC BAA-895] Length = 629 Score = 568 bits (1464), Expect = e-160, Method: Compositional matrix adjust. Identities = 293/616 (47%), Positives = 397/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG +GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSSGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVSRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEMGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 S+ ++ + + + L P+ + L S+ P A + E+++I+ Sbjct: 487 PSAESAGEVNAHLTAPLSREASGEDLLRRPEMTYAQLTSLTPFAPGLDDAQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPVSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKKQ 622 >gi|21961160|gb|AAM87686.1|AE014015_11 glucose-inhibited division protein [Yersinia pestis KIM 10] gi|45438630|gb|AAS64176.1| glucose inhibited division protein A [Yersinia pestis biovar Microtus str. 91001] Length = 656 Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust. Identities = 297/616 (48%), Positives = 398/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDAL Sbjct: 34 FDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAL 93 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYRLA++ + +Q NL + Q V Sbjct: 94 GGLMAKATDLAGIQFRILNASKGPAVRATRAQADRVLYRLAVRTALENQPNLMIFQQPVE 153 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS SL Sbjct: 154 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPSISLSQR 213 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +TI + + Q D + FSF+ + + Q+ C IT Sbjct: 214 LRELPLRVNRLKTGTPPRIDARTIDFSQLTPQLGDTPIPVFSFLGNAEQHPEQMACHITY 273 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 274 TNEKTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNSHQIFLEPEGLTSNE 333 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ GLE IIRPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 334 IYPNGISTSLPFDVQMQIVRSMKGLENARIIRPGYAIEYDFFDPRDLKPTLESKYIQGLF 393 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+ R +N+ D R ++Y+GV++DDL++ G EPY Sbjct: 394 FAGQINGTTGYEEAAAQGLLAGLNAGRFANEEDGWSPRRDEAYLGVLVDDLSTLGTKEPY 453 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL- 483 RMFTSRAEYR+ LR DNAD RLT G KLG + + R F++ +++ R L+ + + Sbjct: 454 RMFTSRAEYRLMLREDNADLRLTETGRKLGLVDDIRWAHFSQKVEQIEKERQRLRDIWVH 513 Query: 484 -TSKNLSSTSISFKQD-GKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 S+N+S + K K E L P+ + L S+ + ++++I+ Sbjct: 514 PHSENVSEINALLKAPLSKEANGEELLRRPEIDYRLLTSLTSFGPALTDPQSADQVEIQV 573 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P D DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 574 KYEGYITRQQEEIEKQLRNENTLLPVDLDYQQVSGLSNEVIAKLNDHKPSSIGQASRISG 633 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 634 ITPAAISILLVWLKKQ 649 >gi|283836165|ref|ZP_06355906.1| hypothetical protein CIT292_10591 [Citrobacter youngae ATCC 29220] gi|291068359|gb|EFE06468.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Citrobacter youngae ATCC 29220] Length = 629 Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust. Identities = 294/616 (47%), Positives = 394/616 (63%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDHAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +TI + +Q +D + FSF+ D + RQ+ C IT Sbjct: 187 LRELPLRVSRLKTGTPPRIDARTIDFSVLSQQNSDNPMPVFSFLGDVAQHPRQMPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENARIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQG++AG+N+AR S + D R +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGMLAGLNAARLSAEKDGWAPRRDQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLERIEQERQRLKSTWVN 486 Query: 485 SKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 S+ ++ + + + L PD + L S+ A + E+++I+ Sbjct: 487 PLAESAAEVNAHLATPLSREASGEDLLRRPDMTYAQLTSLSAFAPALDDAQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E + + E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQEEIERQQRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPVSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKKQ 622 >gi|90409269|ref|ZP_01217371.1| glucose-inhibited division protein A [Psychromonas sp. CNPT3] gi|90309629|gb|EAS37812.1| glucose-inhibited division protein A [Psychromonas sp. CNPT3] Length = 628 Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust. Identities = 299/624 (47%), Positives = 403/624 (64%), Gaps = 5/624 (0%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 + +DVI+IGGGHAG EAAA +A++G +T L+TH T+G MSCNPAIGG+GKGHLV+E+ Sbjct: 4 HEHFDVIIIGGGHAGTEAAASSARMGLNTLLLTHNIETLGQMSCNPAIGGIGKGHLVKEV 63 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL GLM D AGIQFR LN KGPAVR R QADR LY+ A++ ++ +QENL + Q Sbjct: 64 DALGGLMANATDKAGIQFRTLNSSKGPAVRATRAQADRLLYKAAIREKLENQENLKIFQQ 123 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 EV E + ++ +V + +VVLT GTFL G+IHIG GR GD S L Sbjct: 124 EVEDLIVENDQVTGVVTKMGVKFSAKSVVLTVGTFLNGLIHIGLKNYSGGRAGDPASIGL 183 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECG 241 GRLKTGTPAR+D ++I + E Q D + FSFM + RQI C Sbjct: 184 AQRLKDLPIRMGRLKTGTPARIDARSIDFSVLEVQHGDTPIPTFSFMGKASDHPRQIPCY 243 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT TN +TH II ++ S +Y+G I GPRYCPSIEDKI+RF ++N HQIF+EPEGL Sbjct: 244 ITHTNEKTHDIIRNSLDRSPMYTGVIDGVGPRYCPSIEDKIMRFADKNSHQIFVEPEGLT 303 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T VYPNGIST+LP ++Q +FI+++ G E + RPGYAIEYDY +P++L TLE+K I Sbjct: 304 THEVYPNGISTSLPFDVQIEFIQSMKGFENAFLTRPGYAIEYDYCDPRDLKSTLESKYIH 363 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQINGTTGYEEAAAQGL+AG+N+A S + R ++Y+GV+IDDL++ G Sbjct: 364 GLFFAGQINGTTGYEEAAAQGLLAGMNAALYSQDKEGWSPRRNEAYLGVLIDDLSTLGTK 423 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+ LR DNAD+RLT IG + G I + R K F++ + LK Sbjct: 424 EPYRMFTSRAEYRLLLREDNADSRLTAIGREYGVIDDARWKMFSEKQETIELESQRLKGQ 483 Query: 482 VLTSKNLSSTSIS--FKQDGKTRTAYE-FLSYPDFSIQNLFSICPDARKFSS-LVIERLQ 537 + ++++ I+ KQ + + E + P+ +L +I S E+++ Sbjct: 484 WVNPNSVNAAQINALLKQPMQRESTLEAMIRRPEIKYLDLMNIEGLGPAVSDPKAAEQIE 543 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ Y Y RQ+ E ++ K E L+P D DY + LSNE KL+ +KP ++ +AS+ Sbjct: 544 IKIKYQGYIDRQLDEIEKSKRNENTLLPLDIDYQIVKGLSNEAIAKLNEMKPESIGKASR 603 Query: 598 IEGMTPAALNLLLIYIKKNTVKLN 621 I G+TPAA+++LLIY+KKN ++ N Sbjct: 604 IPGITPAAISILLIYLKKNGLRRN 627 >gi|89092258|ref|ZP_01165212.1| glucose inhibited division protein A [Oceanospirillum sp. MED92] gi|89083346|gb|EAR62564.1| glucose inhibited division protein A [Oceanospirillum sp. MED92] Length = 631 Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust. Identities = 294/618 (47%), Positives = 399/618 (64%), Gaps = 7/618 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAG EAA +A++GA T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 YDVIVIGGGHAGTEAALASARIGAKTLLLTHNIETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DG M R D GIQFR LN +KGPAVR R QADR LY+ A++ + +Q+NLD+ Q Sbjct: 67 DGAMARATDKGGIQFRTLNSRKGPAVRATRAQADRILYKAAIRHILENQDNLDIFQQSAD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 TE + +V Q ++VVLT GTFL GVIHIG GR GD PS +L + Sbjct: 127 DLITEGEAVRGVVTQTGIRFHANSVVLTAGTFLGGVIHIGLENHSGGRAGDPPSIALADR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN--RQIECGIT 243 + F RLKTGTP R+D +++ + ++Q D S+M K+T+ +QI C IT Sbjct: 187 LRELPFRVDRLKTGTPPRIDARSVDFSVMQEQPGDTPTPVMSYM-GKLTDHPQQISCYIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH I+ + S +Y+G I+ GPRYCPSIEDKI+RF +++ HQ+F+EPEGL T Sbjct: 246 HTNERTHEILRSGLDRSPMYTGVIEGVGPRYCPSIEDKIMRFADKDQHQVFVEPEGLTTH 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP +IQ +++I G E +I+RPGYAIEYD+ NP++L TLETK ++GL Sbjct: 306 ELYPNGISTSLPFDIQLAAVQSIRGFENAHIVRPGYAIEYDFFNPQDLKHTLETKYMNGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEA AQGL+AG N+A +S + R ++YIGV++DDL + G EP Sbjct: 366 FFAGQINGTTGYEEAGAQGLLAGANAALRSLEKAQWYPRRDEAYIGVLVDDLITLGTSEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT G +LG +GE R + F + + LKS + Sbjct: 426 YRMFTSRAEYRLILREDNADLRLTEKGRELGLVGEERWQAFCNKREAIEQEQQRLKSTWI 485 Query: 484 TSKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 K + ++ K Y + L P+ +L + + V E+++I++ Sbjct: 486 LPKTPEADELAPKLKTPLTREYNLADLLKRPELVYSDLAHLKGEGVS-DEQVAEQVEIQN 544 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++++ +E +P+DFDY + LSNELK KL ++P + QAS+I+G Sbjct: 545 KYEGYISRQKDEIEQMRRQENTPLPEDFDYEKVGGLSNELKAKLQEVRPATIAQASRIQG 604 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA++LLL+Y+KK + Sbjct: 605 ITPAAISLLLVYLKKQQL 622 >gi|190571050|ref|YP_001975408.1| glucose-inhibited division protein A [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213019571|ref|ZP_03335377.1| glucose-inhibited division protein A [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|238058369|sp|B3CLI3|MNMG_WOLPP RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|190357322|emb|CAQ54751.1| glucose-inhibited division protein A [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212994993|gb|EEB55635.1| glucose-inhibited division protein A [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 682 Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust. Identities = 316/676 (46%), Positives = 415/676 (61%), Gaps = 63/676 (9%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+V+GGGHAGCEAA AA+LGAST LITHK STIG MSCNPAIGG+ KG +VRE+DAL Sbjct: 4 YDVVVVGGGHAGCEAATAAARLGASTLLITHKISTIGEMSCNPAIGGVAKGVVVREVDAL 63 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DG+MGR D A I VLN +G AV GPR QADR+LY+ A+Q IL+ NL V + V Sbjct: 64 DGIMGRAIDRASIHSVVLNGSRGAAVWGPRAQADRKLYKKAIQEIILNYNNLTVKEESVD 123 Query: 126 GFNTE-----KNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 F E ++ I +++ I S VVLTTGTFLRGVIHIG+ P+GR+GD P+ Sbjct: 124 DFLIESDSNGESYIKAVITDSGERILTSRVVLTTGTFLRGVIHIGEQTTPSGRIGDKPAI 183 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 L N+ K+DF GRL+TGTP RLD TI W ++Q D PFS++T+KI Q+ C Sbjct: 184 ELANTLKKYDFKLGRLRTGTPPRLDRGTINWSVLQEQVGDNPPTPFSYLTEKINQPQVSC 243 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN THR+I EN+ SA D PRYCPSIE K+ +F E+N HQIFLEPEG+ Sbjct: 244 FITHTNEHTHRVIRENLHRSASSYLD-NVIAPRYCPSIETKVKKFAEKNNHQIFLEPEGI 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + + +YPNGIS +LP E+Q++ I++I GLE I+RPGYA+EYDYI+P+ELF TLETKK+ Sbjct: 303 DDNTIYPNGISNSLPIEVQYEMIKSIKGLENAEILRPGYAVEYDYIDPRELFHTLETKKV 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GL+ AGQINGTTGYEEAA QG++AGIN+A ++ RTDSYIGVMIDDL +KG+ Sbjct: 363 KGLYFAGQINGTTGYEEAAGQGIIAGINAALSLSQ-KSFVLHRTDSYIGVMIDDLVTKGI 421 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYR+FTSRAEYR+++R DNAD RLT G + + R ++ L L+S Sbjct: 422 TEPYRLFTSRAEYRLAIRSDNADRRLTQKGYDISLVSHERYSVLQGKLKSIKQLEEKLES 481 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV-------- 532 L +T + L S I DG +TA + L YP+ L I P+ SS+ Sbjct: 482 LTITPEQLRSYGIKISYDGIRKTALDLLGYPNIDWNKLREIWPELNMGSSVSYLHNAKAP 541 Query: 533 ----------IERLQIESSYAAYTGRQM-------------------------IEAK--- 554 I+ L + A T + + IEAK Sbjct: 542 LPVIQVADTGIQYLNDDGMDAVDTEKNVDSSVMCWNNTITDSIAKNEIYEAVAIEAKYKP 601 Query: 555 -------EIKFEEKRL---IPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 ++KF ++ + IP +F+YS + LS E+ EKL +KP + A +I+G+TPA Sbjct: 602 YLVRQEADMKFLQEEVNTQIPTNFNYSQIKGLSTEVIEKLQSIKPATIGIAKQIQGITPA 661 Query: 605 ALNLLLIYIKKNTVKL 620 A+ +L+Y++ K+ Sbjct: 662 AIVSILVYLRNKKTKI 677 >gi|323189526|gb|EFZ74806.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli RN587/1] Length = 629 Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust. Identities = 291/616 (47%), Positives = 398/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + + AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIEQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P + + E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFSPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKKQ 622 >gi|52426409|ref|YP_089546.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Mannheimia succiniciproducens MBEL55E] gi|81170554|sp|Q65PZ9|MNMG_MANSM RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|52308461|gb|AAU38961.1| GidA protein [Mannheimia succiniciproducens MBEL55E] Length = 629 Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust. Identities = 291/621 (46%), Positives = 400/621 (64%), Gaps = 13/621 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIGGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA Sbjct: 6 NYDVIVIGGGHAGTEAALAPARMGLKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 + GLM AD AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q E Sbjct: 66 MGGLMATAADQAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVKVALENQPNLDIFQQEA 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E++ ++ + + + +V+LT GTFL G IHIG GR GD S +L + Sbjct: 126 TDILIEQDRVTGVATRMGLKFKTKSVILTAGTFLGGKIHIGLDNYTGGRAGDPASIALAD 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 + RLKTGTP RLD +TI +D KQ D +L FSFM + RQI C IT Sbjct: 186 RLRDLNLRVARLKTGTPPRLDARTINFDILAKQHGDAQLPVFSFMGSVDQHPRQIPCFIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL + Sbjct: 246 HTNEQTHEVIRNNLDRSPMYTGVIEGIGPRYCPSIEDKVMRFADRNSHQIYLEPEGLTSQ 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q + + ++ GLEK I++PGYAIEYD+ +P++L PTLETK I GL Sbjct: 306 EIYPNGISTSLPFDVQMKIVNSMVGLEKTRIVKPGYAIEYDFFDPRDLKPTLETKAIKGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAA+QGL+AGIN+ + + R +Y+GV++DDL + G EP Sbjct: 366 FFAGQINGTTGYEEAASQGLLAGINAGLFVQEKESWFPRRDQAYMGVLVDDLCTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+FTSRAEYR+ LR DNAD+RLTPI +LG I E R RF + ++ R L+++ + Sbjct: 426 YRVFTSRAEYRLLLREDNADSRLTPIAHELGLIDENRWARFNQKMENIERERQRLRNIWI 485 Query: 484 TSKN--------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIER 535 ++ + S+ + + G+ ++Y + +LF D ++ +E+ Sbjct: 486 HPRSEHLDVINEVLSSPLVREASGEDLLRRPEINYQILTALDLFKPAMDDKE----AVEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I Y Y Q E ++ K E IP +FDY+ + LSNE++ KL +P ++ QA Sbjct: 542 VEIAVKYQGYIEHQQEEIEKQKRHENTAIPDNFDYTLVAGLSNEVRAKLEQHRPVSIGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKKN 616 S+I G+TPAA+++LL+ +KK Sbjct: 602 SRISGVTPAAISILLVNLKKQ 622 >gi|261491714|ref|ZP_05988294.1| glucose inhibited cell division protein A [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261495536|ref|ZP_05991983.1| glucose inhibited cell division protein A [Mannheimia haemolytica serotype A2 str. OVINE] gi|261308870|gb|EEY10126.1| glucose inhibited cell division protein A [Mannheimia haemolytica serotype A2 str. OVINE] gi|261312553|gb|EEY13676.1| glucose inhibited cell division protein A [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 630 Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust. Identities = 302/618 (48%), Positives = 388/618 (62%), Gaps = 5/618 (0%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 N+ YDVIV+GGGHAG EAA A++G T ++TH T+G MSCNPAIGG+GKGHLV+EI Sbjct: 4 NQIYDVIVVGGGHAGTEAALAPARMGLKTLILTHNVDTLGQMSCNPAIGGIGKGHLVKEI 63 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DA+ GLM + D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q Sbjct: 64 DAMGGLMAKATDVAGIQFRTLNNSKGPAVRATRAQADRVLYRNAVRTALENQPNLDIFQQ 123 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 EV E N V + + VVLT GTFL G IHIG GR GD + L Sbjct: 124 EVVDILVENNRAVGAVTKMGLTFKARAVVLTAGTFLAGKIHIGLDNYAGGRAGDPAATML 183 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECG 241 + + RLKTGTP RLD +TI +D KQ DE L FSFM D + RQI C Sbjct: 184 ADRLRDLNLRVDRLKTGTPPRLDARTINFDVLAKQHGDEVLPVFSFMGDVSQHPRQIPCY 243 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT TN +TH +I ++ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGLN Sbjct: 244 ITHTNDQTHDLIRNSLDRSPMYTGIIEGVGPRYCPSIEDKVMRFADRNSHQIYLEPEGLN 303 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T VYPNGIST+LP ++Q + ++ GLE II+PGYAIEYDY +P++L PTLETK I Sbjct: 304 TIEVYPNGISTSLPFDVQMGIVNSMKGLENTRIIKPGYAIEYDYFDPRDLKPTLETKAID 363 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQINGTTGYEEA AQGL+AGIN A + + +R +Y GV++DDL + G Sbjct: 364 GLFFAGQINGTTGYEEAGAQGLLAGINVALQVQGKEAWYPTRDQAYTGVLVDDLCTLGTK 423 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+FTSRAEYR+ LR DNAD RLTP +LG I E R RF + ++ R+ LKS Sbjct: 424 EPYRVFTSRAEYRLLLREDNADIRLTPKAHELGLIDEARWVRFNQKMEAIEQERARLKST 483 Query: 482 V--LTSKNLSSTSISFKQD-GKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQ 537 L NL + + + + + P+ S + L I A E+++ Sbjct: 484 WAHLQMPNLDELNALLANPLAREASGEDLIRRPEMSYEKLTQIALFAPAIEDKQAAEQVE 543 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I Y Y Q E + K E LIP +FDY + +LSNE++ KL +P ++ QAS+ Sbjct: 544 IAIKYQGYIEHQYNEIERHKRHENTLIPVEFDYDKVESLSNEVRAKLMQHRPVSIGQASR 603 Query: 598 IEGMTPAALNLLLIYIKK 615 I G+TPAA+++LL+ +KK Sbjct: 604 ISGITPAAISILLVNLKK 621 >gi|51598260|ref|YP_072451.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Yersinia pseudotuberculosis IP 32953] gi|108810165|ref|YP_654081.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Yersinia pestis Antiqua] gi|108814147|ref|YP_649914.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Yersinia pestis Nepal516] gi|145601143|ref|YP_001165219.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Yersinia pestis Pestoides F] gi|150260936|ref|ZP_01917664.1| glucose inhibited division protein A [Yersinia pestis CA88-4125] gi|161484718|ref|NP_671435.2| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Yersinia pestis KIM 10] gi|161511281|ref|NP_995299.2| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Yersinia pestis biovar Microtus str. 91001] gi|162421890|ref|YP_001608482.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Yersinia pestis Angola] gi|165926144|ref|ZP_02221976.1| glucose-inhibited division protein A [Yersinia pestis biovar Orientalis str. F1991016] gi|165939987|ref|ZP_02228524.1| glucose-inhibited division protein A [Yersinia pestis biovar Orientalis str. IP275] gi|166009678|ref|ZP_02230576.1| glucose-inhibited division protein A [Yersinia pestis biovar Antiqua str. E1979001] gi|166213177|ref|ZP_02239212.1| glucose-inhibited division protein A [Yersinia pestis biovar Antiqua str. B42003004] gi|167401658|ref|ZP_02307152.1| glucose-inhibited division protein A [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167422861|ref|ZP_02314614.1| glucose-inhibited division protein A [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425519|ref|ZP_02317272.1| glucose-inhibited division protein A [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167468637|ref|ZP_02333341.1| glucose-inhibited division protein A [Yersinia pestis FV-1] gi|170026421|ref|YP_001722926.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Yersinia pseudotuberculosis YPIII] gi|186897459|ref|YP_001874571.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Yersinia pseudotuberculosis PB1/+] gi|218931106|ref|YP_002348981.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Yersinia pestis CO92] gi|229839841|ref|ZP_04460000.1| glucose-inhibited cell-division protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229841925|ref|ZP_04462081.1| glucose-inhibited cell-division protein [Yersinia pestis biovar Orientalis str. India 195] gi|229896802|ref|ZP_04511965.1| glucose-inhibited cell-division protein [Yersinia pestis Pestoides A] gi|229904691|ref|ZP_04519802.1| glucose-inhibited cell-division protein [Yersinia pestis Nepal516] gi|270488401|ref|ZP_06205475.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Yersinia pestis KIM D27] gi|294505652|ref|YP_003569714.1| glucose-inhibited division protein A [Yersinia pestis Z176003] gi|21263668|sp|Q8Z9R8|MNMG_YERPE RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|81170592|sp|Q663P9|MNMG_YERPS RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|123072470|sp|Q1C086|MNMG_YERPA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|123246082|sp|Q1CCG6|MNMG_YERPN RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|166224339|sp|A4TSI4|MNMG_YERPP RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|205831572|sp|B1JR32|MNMG_YERPY RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|238687314|sp|A9R5U9|MNMG_YERPG RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|238691428|sp|B2K7J2|MNMG_YERPB RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|51591542|emb|CAH23214.1| glucose inhibited division protein A [Yersinia pseudotuberculosis IP 32953] gi|108777795|gb|ABG20314.1| glucose inhibited division protein A [Yersinia pestis Nepal516] gi|108782078|gb|ABG16136.1| glucose inhibited division protein A [Yersinia pestis Antiqua] gi|115349717|emb|CAL22698.1| glucose inhibited division protein A [Yersinia pestis CO92] gi|145212839|gb|ABP42246.1| glucose inhibited division protein A [Yersinia pestis Pestoides F] gi|149290344|gb|EDM40421.1| glucose inhibited division protein A [Yersinia pestis CA88-4125] gi|162354705|gb|ABX88653.1| glucose-inhibited division protein A [Yersinia pestis Angola] gi|165912113|gb|EDR30753.1| glucose-inhibited division protein A [Yersinia pestis biovar Orientalis str. IP275] gi|165922004|gb|EDR39181.1| glucose-inhibited division protein A [Yersinia pestis biovar Orientalis str. F1991016] gi|165991600|gb|EDR43901.1| glucose-inhibited division protein A [Yersinia pestis biovar Antiqua str. E1979001] gi|166205475|gb|EDR49955.1| glucose-inhibited division protein A [Yersinia pestis biovar Antiqua str. B42003004] gi|166958253|gb|EDR55274.1| glucose-inhibited division protein A [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049040|gb|EDR60448.1| glucose-inhibited division protein A [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055533|gb|EDR65326.1| glucose-inhibited division protein A [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169752955|gb|ACA70473.1| glucose inhibited division protein A [Yersinia pseudotuberculosis YPIII] gi|186700485|gb|ACC91114.1| glucose inhibited division protein A [Yersinia pseudotuberculosis PB1/+] gi|229678809|gb|EEO74914.1| glucose-inhibited cell-division protein [Yersinia pestis Nepal516] gi|229691264|gb|EEO83317.1| glucose-inhibited cell-division protein [Yersinia pestis biovar Orientalis str. India 195] gi|229696207|gb|EEO86254.1| glucose-inhibited cell-division protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700240|gb|EEO88276.1| glucose-inhibited cell-division protein [Yersinia pestis Pestoides A] gi|262363817|gb|ACY60538.1| glucose-inhibited division protein A [Yersinia pestis D106004] gi|262367753|gb|ACY64310.1| glucose-inhibited division protein A [Yersinia pestis D182038] gi|270336905|gb|EFA47682.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Yersinia pestis KIM D27] gi|294356111|gb|ADE66452.1| glucose-inhibited division protein A [Yersinia pestis Z176003] gi|320017466|gb|ADW01038.1| glucose-inhibited cell-division protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 629 Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust. Identities = 297/616 (48%), Positives = 398/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYRLA++ + +Q NL + Q V Sbjct: 67 GGLMAKATDLAGIQFRILNASKGPAVRATRAQADRVLYRLAVRTALENQPNLMIFQQPVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS SL Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPSISLSQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +TI + + Q D + FSF+ + + Q+ C IT Sbjct: 187 LRELPLRVNRLKTGTPPRIDARTIDFSQLTPQLGDTPIPVFSFLGNAEQHPEQMACHITY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNSHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ GLE IIRPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMKGLENARIIRPGYAIEYDFFDPRDLKPTLESKYIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+ R +N+ D R ++Y+GV++DDL++ G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAGRFANEEDGWSPRRDEAYLGVLVDDLSTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL- 483 RMFTSRAEYR+ LR DNAD RLT G KLG + + R F++ +++ R L+ + + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTETGRKLGLVDDIRWAHFSQKVEQIEKERQRLRDIWVH 486 Query: 484 -TSKNLSSTSISFKQD-GKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 S+N+S + K K E L P+ + L S+ + ++++I+ Sbjct: 487 PHSENVSEINALLKAPLSKEANGEELLRRPEIDYRLLTSLTSFGPALTDPQSADQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P D DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYITRQQEEIEKQLRNENTLLPVDLDYQQVSGLSNEVIAKLNDHKPSSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 ITPAAISILLVWLKKQ 622 >gi|319778790|ref|YP_004129703.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Taylorella equigenitalis MCE9] gi|317108814|gb|ADU91560.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Taylorella equigenitalis MCE9] Length = 631 Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust. Identities = 313/629 (49%), Positives = 409/629 (65%), Gaps = 22/629 (3%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DVIV+GGGHAG EAA +A+ GA T L+TH TIG MSCNP+IGG+GKGHLV+E+D Sbjct: 5 QEFDVIVVGGGHAGTEAALASARTGAKTLLLTHNIETIGQMSCNPSIGGIGKGHLVKELD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M AD AGIQFR+LN KGPAVR R QADR LY+ A++ +I +Q+NL V Q Sbjct: 65 ALGGAMALAADEAGIQFRILNSSKGPAVRATRIQADRLLYKQAIRSKIENQQNLFVFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + + + Q + +VVLT GTFL G+IHIG GR GD PS SL Sbjct: 125 VEDLILEGDTVVGAITQIGYKFKSKSVVLTAGTFLNGLIHIGLTHYKGGRAGDPPSKSLA 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFM-TDKITNRQIECG 241 + + GRLKTGTP RLD ++I + K +Q D IP FSFM ++++ +QI C Sbjct: 185 DRLKELKLPQGRLKTGTPPRLDSRSIDFSKLIEQKGDTNPIPVFSFMGSEEMHPKQISCW 244 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT TN TH IIME + S +Y+G I GPRYCPSIEDKI RF R+ HQIFLEPEGL Sbjct: 245 ITHTNPNTHEIIMEGLDRSPLYTGVIDGVGPRYCPSIEDKIHRFSHRDSHQIFLEPEGLL 304 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ +YPNG+ST+LP +IQ +FI++I GLE I+RPGYAIEYDY +P+E+ +LETK I Sbjct: 305 TNEIYPNGMSTSLPFDIQLRFIQSINGLENAYILRPGYAIEYDYFDPREIKGSLETKSIK 364 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQINGTTGYEEAAAQGL+AG+N+AR + + R +Y+GV+IDDL +KGV Sbjct: 365 GLFFAGQINGTTGYEEAAAQGLIAGLNAARYTRGEEPWYPRRDQAYLGVLIDDLITKGVS 424 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL--LK 479 EPYRMFTSRAEYR+SLR DNAD RLT IG KLG + ++R + F K + N R + L+ Sbjct: 425 EPYRMFTSRAEYRLSLREDNADYRLTEIGRKLGLVDDQRWETFDK--KRENIEREIQRLR 482 Query: 480 SLVLTSKNLSSTSI------SFKQDGKTRTAYEFLSYPDFSIQNLFSI-------CPDAR 526 LTSK +S+ + F++D T + L P+ S + L ++ + Sbjct: 483 DFRLTSKLISNDEVISKFGKPFEKD---YTLEDLLKRPNISYEMLMNLNLSGDISAKSST 539 Query: 527 KFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSI 586 + IE+++I++ Y Y RQ E E IPK +Y L LS E+++KL Sbjct: 540 NLTDKEIEQIEIQTKYQGYISRQKEEVDRTLNYENLRIPKGINYDDLVHLSFEVRQKLKE 599 Query: 587 LKPFNLLQASKIEGMTPAALNLLLIYIKK 615 P + QAS+I G+TPAA++LLLI+IK+ Sbjct: 600 HMPETIGQASRISGVTPAAISLLLIHIKR 628 >gi|229847407|ref|ZP_04467507.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Haemophilus influenzae 7P49H1] gi|229809645|gb|EEP45371.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Haemophilus influenzae 7P49H1] Length = 629 Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust. Identities = 296/623 (47%), Positives = 394/623 (63%), Gaps = 17/623 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIGGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DA Sbjct: 6 TYDVIVIGGGHAGTEAALAPARMGLKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 + GLM D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q E Sbjct: 66 MGGLMAHTTDKAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIFQQEA 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E++ ++ + + + R +VVLT GTFL G IHIG GR GD S +L Sbjct: 126 TDILIEQDRVTGVSTKMGLIFRAKSVVLTAGTFLAGKIHIGLENYEGGRAGDPASVNLSY 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 RLKTGTP R+D +TI +D KQ +D L FSFM + +QI C IT Sbjct: 186 RLRDLGLRVDRLKTGTPPRIDARTINFDILAKQHSDAVLPVFSFMGSVSDHPQQIPCYIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL ++ Sbjct: 246 HTNEQTHEVIRNNLDRSPMYTGVIEGVGPRYCPSIEDKVMRFADRNSHQIYLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNGIST+LP ++Q + ++ GLE I++PGYAIEYDY +P++L PTLETK ISGL Sbjct: 306 EVYPNGISTSLPFDVQMGIVNSMKGLENARIVKPGYAIEYDYFDPRDLKPTLETKSISGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ + D R SY GV++DDL + G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGINAGLYVQEKDAWYPRRDQSYTGVLVDDLCTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+FTSRAEYR+ LR DNAD RLTPI +LG I + R RF + ++ R L+++ L Sbjct: 426 YRVFTSRAEYRLLLREDNADIRLTPIAHELGLIDDARWARFNQKMENIEQERQRLRNIWL 485 Query: 484 ---------TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VI 533 +K L S + + + + L P+ + L S+ P + Sbjct: 486 HPRSEYLEEANKVLGSPLV------REASGEDLLRRPEMTYDILTSLTPYKPAMEDKEAV 539 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I Y Y Q E ++ K E IP +FDYS + +LSNE++ KL +P ++ Sbjct: 540 EQVEIAIKYQGYIEHQQEEIEKQKRHENTAIPANFDYSKVSSLSNEVRAKLEQHRPVSIS 599 Query: 594 QASKIEGMTPAALNLLLIYIKKN 616 QAS+I G+TPAA++++L+ +KK Sbjct: 600 QASRISGITPAAISIILVNLKKQ 622 >gi|242241378|ref|YP_002989559.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Dickeya dadantii Ech703] gi|242133435|gb|ACS87737.1| glucose inhibited division protein A [Dickeya dadantii Ech703] Length = 629 Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust. Identities = 292/620 (47%), Positives = 393/620 (63%), Gaps = 13/620 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA+ Sbjct: 7 FDVIVIGGGHAGTEAAMASARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAM 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM R D GIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMARAIDRGGIQFRILNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + +V Q R TVVLT GTFL G IHIG GR GD PS +L Sbjct: 127 DLIVENDRVVGVVTQMGLKFRARTVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSVALSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSF+ D + Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLTQQHGDNPMPVFSFLGDASQHPAQMPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEHTHEVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYDY +P++L TLE+K I+GLF Sbjct: 307 IYPNGISTSLPFDVQWQIVRSMQGMENARIVRPGYAIEYDYFDPRDLKQTLESKYIAGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQG++AG+N+AR + + R +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGMLAGLNAARLAFDQEGWTPRRDQAYLGVLVDDLCTLGTREPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R L+ + + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRQLGMVDDERWARFNEKLENIEKERQRLRGIFVH 486 Query: 485 SKN--------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 ++ L T +S + G+ + Y + +FS + E++ Sbjct: 487 PQSGQIEQVNVLLKTPLSREASGEDLLRRPEIDYAMLTRLPMFSPA----LVDAQAAEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y Y RQ E + E L+P D DY + LSNE+ KL+ KP ++ QAS Sbjct: 543 EIQVKYEGYIARQQDEIDKQSRNENTLLPADLDYRQVSGLSNEVIAKLNDHKPSSIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKN 616 +I G+TPAA+++LL+++KK Sbjct: 603 RISGITPAAISILLVWLKKQ 622 >gi|88797178|ref|ZP_01112768.1| glucose-inhibited division protein A [Reinekea sp. MED297] gi|88780047|gb|EAR11232.1| glucose-inhibited division protein A [Reinekea sp. MED297] Length = 628 Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust. Identities = 292/618 (47%), Positives = 396/618 (64%), Gaps = 6/618 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DVIVIGGGHAG EAA +A+ GA T L+TH TIG MSCNPAIGG+GK HLV+EID Sbjct: 5 KQFDVIVIGGGHAGTEAALASARTGAQTLLLTHNIDTIGVMSCNPAIGGIGKSHLVKEID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M R D AGIQ+R+LN +KGPAVR R QADR+LYR A+++ + SQ NL++ Sbjct: 65 ALGGAMARATDLAGIQWRILNSRKGPAVRATRAQADRQLYRAAIRQIVESQPNLEIFAQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 + + + V Q I VVLT GTFL G IH+G GRMGD+PS SL Sbjct: 125 ADDLILDGDRVVGAVTQTGIRILAKAVVLTAGTFLNGKIHVGTDNYAGGRMGDTPSISLA 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN--RQIECG 241 + TGRLKTGTPAR+D +++ + +Q D L S++ ++ + RQI C Sbjct: 185 ERLKELPIRTGRLKTGTPARIDARSVDFSVMTEQPGDAPLPVMSYI-GRVEDHPRQISCY 243 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 I+ T +TH II N+ SA++SG+I+ GPRYCPSIEDKI RF +++ HQIF+EPEGL Sbjct: 244 ISHTTEQTHDIIRSNLDRSAMFSGNIEGTGPRYCPSIEDKITRFADKDSHQIFVEPEGLT 303 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T +YPNGIST+LP ++Q FIRTI G E +I RPGYAIEYDY NP++L +LE+K I Sbjct: 304 TYELYPNGISTSLPFDVQVSFIRTIRGFENAHITRPGYAIEYDYYNPQDLKHSLESKFIG 363 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 LF AGQINGTTGYEEA AQGL+AG+N+ARK+ + D R ++YIGV++DDL + G Sbjct: 364 SLFFAGQINGTTGYEEAGAQGLLAGLNAARKAREQDVWYPRRDEAYIGVLVDDLITMGTK 423 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAE+R+ LR DNAD RLT G +LG + + R F + ++ +K+ Sbjct: 424 EPYRMFTSRAEHRLLLREDNADARLTETGRQLGLVDDERWSAFCTKQENIAREQARVKTT 483 Query: 482 VLTSKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 + ++ IS K + + L P+ ++ + P S E+++I Sbjct: 484 YIQPNTAAAAQISEKLPQPLTREFSLGDLLKRPELGYSDIAAAMPPEAPLSLYEAEQVEI 543 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + Y Y RQ E + +K E +P+ D S+ LSNE+K+KL ++P L QAS+I Sbjct: 544 SAKYEGYIQRQQDEIESLKRHENTRLPETLDIDSIGGLSNEVKQKLKEVRPETLAQASRI 603 Query: 599 EGMTPAALNLLLIYIKKN 616 G+TPAA+++LL++IKK+ Sbjct: 604 SGVTPAAVSMLLVHIKKH 621 >gi|153206122|ref|ZP_01945385.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Coxiella burnetii 'MSU Goat Q177'] gi|165918750|ref|ZP_02218836.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Coxiella burnetii RSA 334] gi|212217717|ref|YP_002304504.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Coxiella burnetii CbuK_Q154] gi|120577252|gb|EAX33876.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Coxiella burnetii 'MSU Goat Q177'] gi|165917578|gb|EDR36182.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Coxiella burnetii RSA 334] gi|212011979|gb|ACJ19359.1| glucose inhibited division protein A [Coxiella burnetii CbuK_Q154] Length = 627 Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust. Identities = 302/620 (48%), Positives = 403/620 (65%), Gaps = 9/620 (1%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 ++ +DVIV+GGGHAG EAA VAA++GA T L+TH T+G MSCNPAIGG+GK HLV+EI Sbjct: 5 SQQFDVIVVGGGHAGTEAALVAARMGARTLLLTHNIETLGQMSCNPAIGGIGKSHLVKEI 64 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G+M AD AGI FR LN +KGPAVR R QADR LY+ A+ + +Q +L + Q Sbjct: 65 DALGGIMALAADQAGIHFRTLNARKGPAVRATRAQADRVLYKAAIHHALENQPHLWLFQQ 124 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 V + N + +V Q TV+LT GTFL G IHIG GR GD P+ +L Sbjct: 125 GVDDLIIQNNRAAGVVTQMGLAFYAPTVILTVGTFLGGKIHIGMNHYRGGRAGDPPALAL 184 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECG 241 + F RLKTGTP R+DG+TI + + +Q +D+ L S+ + + RQ+ C Sbjct: 185 AERLREMPFRVERLKTGTPPRIDGRTINYSQLIEQPSDQPLPLMSYWSHGEDRPRQVSCF 244 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT+TN +TH II +K S ++SG I+ GPRYCPSIEDKIVRF +RN HQ+FLEPEGLN Sbjct: 245 ITQTNEKTHDIIRNGLKTSPLFSGVIEGVGPRYCPSIEDKIVRFADRNSHQLFLEPEGLN 304 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T VYPNG+ST+L ++Q FI +I GLEK +I RPGYAIEYDY +P++L P+LETK + Sbjct: 305 TPEVYPNGVSTSLSFDVQLDFIHSIKGLEKCHITRPGYAIEYDYFDPRDLKPSLETKYVP 364 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GL+ AGQINGTTGYEEAAAQGL+AGIN+A + + +R ++YIGV+IDDLT++G Sbjct: 365 GLYFAGQINGTTGYEEAAAQGLIAGINAALQIQERAPWTPARDEAYIGVLIDDLTTRGTN 424 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+ LR DNAD RLT G LGC+ + R F K + + LK Sbjct: 425 EPYRMFTSRAEYRLLLRQDNADLRLTEKGRDLGCVDDERWNFFVKKKETIEKEQQRLKKQ 484 Query: 482 VLTSKNLSSTSIS--FKQ-DGKTRTAYEFLSYPDFSIQNLFSI---CPDARKFSSLVIER 535 + K+ + +I F+Q + +A + L P+ + L I P + S V E+ Sbjct: 485 RIWPKSTVAKAIESRFQQLLERDYSAMDLLRRPEINYPALMQIEELGPAVLEPS--VAEQ 542 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 + I++ Y Y Q+ E K + IP DY+ + LSNE+++KL+ KP L QA Sbjct: 543 IDIQAKYEGYLTHQLAEIDRQKKYQTAQIPSSLDYNQVTGLSNEVRQKLNETKPTTLGQA 602 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G+TPAA++LLL+++KK Sbjct: 603 SRIPGITPAAISLLLVHLKK 622 >gi|332970828|gb|EGK09807.1| glucose inhibited division protein A [Psychrobacter sp. 1501(2011)] Length = 642 Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust. Identities = 300/613 (48%), Positives = 389/613 (63%), Gaps = 9/613 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 +SYDV+VIGGGHAG EAA AA++GA T L+TH T+G MSCNPAIGG+GK HLVREID Sbjct: 16 KSYDVVVIGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPAIGGIGKSHLVREID 75 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D AGIQFRVLN +KG AVR R QADR LY+ A++ + +Q NLD+ Q Sbjct: 76 ALGGAMALATDKAGIQFRVLNSRKGAAVRATRAQADRILYKAAIRHTLENQPNLDLFQQG 135 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 E ++V + R TVVLT+GTFL GVIHIG GR GD PS L Sbjct: 136 ADDILVENGKACAVVTSTGIIFRTKTVVLTSGTFLGGVIHIGLDNSKGGRAGDQPSIKLA 195 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + GRLKTGTPAR+D +T+ + + Q D L SFM + + Q+ C I Sbjct: 196 ERLSELKLPVGRLKTGTPARIDARTVDFSVMKVQPGDTPLPVMSFMGNVDMHPEQVNCFI 255 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II +++ S ++SG+I+ GPRYCPSIEDKI RF +++ HQIF+EPEGL T Sbjct: 256 THTNEKTHDIIRQHLDRSPLFSGNIEGVGPRYCPSIEDKIHRFADKDSHQIFIEPEGLTT 315 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNGIST+LP ++Q +FIRT+ GLE +I RPGYAIEYDY NP+ L PTLETK I Sbjct: 316 HELYPNGISTSLPFDVQLEFIRTMAGLENAHITRPGYAIEYDYFNPQSLKPTLETKSIDS 375 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNK---LDCICFSRTDSYIGVMIDDLTSKG 419 L+ AGQINGTTGYEEA QGL+AGIN+A + +D R +Y+GV++DDL + G Sbjct: 376 LYFAGQINGTTGYEEAGVQGLLAGINAALSTQDNPVMDSWTPRRDQAYLGVLVDDLITHG 435 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD+RLT IG KLG + + R + + ++ LK Sbjct: 436 TKEPYRMFTSRAEYRLLLREDNADHRLTEIGRKLGLVDDTRWEAYQNKMESIGAESGRLK 495 Query: 480 SLVLTSKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 L T N + + K TAY+ L P+ ++ I ++ V E++ Sbjct: 496 ELWATPNNELGKKFAERTGESLSKESTAYDLLKRPNVGFDDIAVIT--GADVAADVGEQI 553 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I YA Y RQ + ++K E +P DFDYS++ LSNE+ +KL ++P L QAS Sbjct: 554 EISVKYAGYIDRQQEDIDQMKRLENTELPVDFDYSAVSGLSNEIVQKLQDIRPATLAQAS 613 Query: 597 KIEGMTPAALNLL 609 +I G+TPAA+ LL Sbjct: 614 RISGVTPAAIQLL 626 >gi|187476515|ref|YP_784539.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Bordetella avium 197N] gi|123515352|sp|Q2L2T3|MNMG_BORA1 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|115421101|emb|CAJ47585.1| glucose inhibited division protein A [Bordetella avium 197N] Length = 637 Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust. Identities = 301/623 (48%), Positives = 402/623 (64%), Gaps = 13/623 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA+ GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALAAARSGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D AGIQFR+LN KGPAVR R QADR LYR A++ + +QENL + Q V Sbjct: 67 GGAMAIATDEAGIQFRILNSSKGPAVRATRAQADRVLYRKAIRHRLENQENLWLFQQSVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G+IH+G GR GD P+NSL Sbjct: 127 DLIVEGDKVVGAVTQIGLKFRGRAVVLTAGTFLNGLIHVGLQHYSGGRAGDPPANSLGQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFM-TDKITNRQIECGIT 243 + GRLKTGTP R+DG+TI + E+Q D IP FSFM + + RQ+ C IT Sbjct: 187 LKELKLPQGRLKTGTPPRIDGRTINYSVLEEQPGDLDPIPVFSFMGSAALHPRQLPCWIT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +YSG I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL+T Sbjct: 247 HTNERTHDIIRGGLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKPSHQIFLEPEGLDTH 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNG+ST+LP ++Q++ I ++PGLE +I+RPGYAIEYDY +P+ L +LETK ISGL Sbjct: 307 EVYPNGVSTSLPFDVQYELIHSLPGLEHAHILRPGYAIEYDYFDPRGLKSSLETKAISGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+AR ++ + R ++Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGINAARYASDREAWVPRRDEAYLGVLVDDLVTRGVTEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F + L+S + Sbjct: 427 YRMFTSRAEYRLSLREDNADLRLTEIGRELGLVDDIRWDVFNRKRDAIQAEVQRLQSTWV 486 Query: 484 TSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF--------SSLV 532 + L + ++ K + + L P+ S + L A + ++ Sbjct: 487 NPRLLPEEPAQALLGKAIEREYALADLLKRPNISYEALMQARNGAGELLAGPGLLGDDVL 546 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 E+++I+ YA Y RQ E ++ E++ IP D DY ++ +LS E+++KL +P + Sbjct: 547 AEQVEIQIKYAGYIERQRDEVQKHVVHEQQAIPADIDYDAVSSLSFEVRQKLKTHRPETV 606 Query: 593 LQASKIEGMTPAALNLLLIYIKK 615 QA++I G+TPAA++LLLI++K+ Sbjct: 607 GQAARISGVTPAAVSLLLIHLKR 629 >gi|154707156|ref|YP_001423623.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Coxiella burnetii Dugway 5J108-111] gi|161511216|ref|NP_820901.2| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Coxiella burnetii RSA 493] gi|161831260|ref|YP_001597739.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Coxiella burnetii RSA 331] gi|212211701|ref|YP_002302637.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Coxiella burnetii CbuG_Q212] gi|30581060|sp|P94613|MNMG_COXBU RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|189039337|sp|A9KBS8|MNMG_COXBN RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|189039338|sp|A9NBA8|MNMG_COXBR RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|154356442|gb|ABS77904.1| glucose inhibited division protein A [Coxiella burnetii Dugway 5J108-111] gi|161763127|gb|ABX78769.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Coxiella burnetii RSA 331] gi|206584175|gb|AAO91415.2| glucose inhibited division protein A [Coxiella burnetii RSA 493] gi|212010111|gb|ACJ17492.1| glucose inhibited division protein A [Coxiella burnetii CbuG_Q212] Length = 627 Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust. Identities = 302/620 (48%), Positives = 403/620 (65%), Gaps = 9/620 (1%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 ++ +DVIV+GGGHAG EAA VAA++GA T L+TH T+G MSCNPAIGG+GK HLV+EI Sbjct: 5 SQQFDVIVVGGGHAGTEAALVAARMGARTLLLTHNIETLGQMSCNPAIGGIGKSHLVKEI 64 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G+M AD AGI FR LN +KGPAVR R QADR LY+ A+ + +Q +L + Q Sbjct: 65 DALGGIMALAADQAGIHFRTLNARKGPAVRATRAQADRVLYKAAIHHALENQPHLWLFQQ 124 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 V + N + +V Q TV+LT GTFL G IHIG GR GD P+ +L Sbjct: 125 GVDDLIIQNNRAAGVVTQMGLAFYAPTVILTVGTFLGGKIHIGMNHYRGGRAGDPPALAL 184 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECG 241 + F RLKTGTP R+DG+TI + + +Q +D+ L S+ + + RQ+ C Sbjct: 185 AERLREMPFRVERLKTGTPPRIDGRTINYSQLIEQPSDQPLPLMSYWSHGEDRPRQVSCF 244 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT+TN +TH II +K S ++SG I+ GPRYCPSIEDKIVRF +RN HQ+FLEPEGLN Sbjct: 245 ITQTNEKTHDIIRNGLKTSPLFSGVIEGVGPRYCPSIEDKIVRFADRNSHQLFLEPEGLN 304 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T VYPNG+ST+L ++Q FI +I GLEK +I RPGYAIEYDY +P++L P+LETK + Sbjct: 305 TPEVYPNGVSTSLSFDVQLDFIHSIKGLEKCHITRPGYAIEYDYFDPRDLKPSLETKYVP 364 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GL+ AGQINGTTGYEEAAAQGL+AGIN+A + + +R ++YIGV+IDDLT++G Sbjct: 365 GLYFAGQINGTTGYEEAAAQGLIAGINAALQIQERAPWTPARDEAYIGVLIDDLTTRGTN 424 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+ LR DNAD RLT G LGC+ + R F K + + LK Sbjct: 425 EPYRMFTSRAEYRLLLRQDNADLRLTEKGRDLGCVDDERWNFFVKKKETIEKEQQRLKKQ 484 Query: 482 VLTSKNLSSTSIS--FKQ-DGKTRTAYEFLSYPDFSIQNLFSI---CPDARKFSSLVIER 535 + K+ + +I F+Q + +A + L P+ + L I P + S V E+ Sbjct: 485 RIWPKSTVAKAIESRFQQLLERDYSAMDLLRRPEINYPALMQIEELGPAVLEPS--VAEQ 542 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 + I++ Y Y Q+ E K + IP DY+ + LSNE+++KL+ KP L QA Sbjct: 543 IDIQAKYEGYLTHQLAEIARQKKYQTAQIPSSLDYNQVTGLSNEVRQKLNETKPTTLGQA 602 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G+TPAA++LLL+++KK Sbjct: 603 SRIPGITPAAISLLLVHLKK 622 >gi|119475231|ref|ZP_01615584.1| glucose-inhibited division protein A [marine gamma proteobacterium HTCC2143] gi|119451434|gb|EAW32667.1| glucose-inhibited division protein A [marine gamma proteobacterium HTCC2143] Length = 630 Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust. Identities = 297/614 (48%), Positives = 394/614 (64%), Gaps = 5/614 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EA +A++G T L+TH T+G MSCNPAIGG+GK HLVREIDAL Sbjct: 7 FDVIVIGGGHAGTEACLASARMGCKTLLLTHNIETLGQMSCNPAIGGIGKSHLVREIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M R D+ GIQFR+LN +KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 67 GGAMARATDSGGIQFRILNARKGPAVRATRAQADRVLYKAAIREILENQPNLSIFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + +S IV Q TV+L+TGTFL G IHIG GR GD PS +L Sbjct: 127 DLIIEGDQVSGIVTQMGLKFFAPTVILSTGTFLGGKIHIGLDNHSGGRAGDPPSITLAER 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + F+ RLKTGTP R+D +++ + E+Q+ D+ SF+ + Q C IT Sbjct: 187 LRELPFNVDRLKTGTPPRIDARSVDFSDLEEQWGDKPEPVMSFLGSLSHHPEQTCCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH II + + S +Y+G I+ GPRYCPSIEDKI RF ++N HQIF+EPEGL T Sbjct: 247 TNEKTHEIIRQGLDRSPMYTGVIEGIGPRYCPSIEDKIHRFADKNSHQIFIEPEGLKTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q + +R+I G E+ +I RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLELVRSIKGFEQAHIARPGYAIEYDYFDPRDLKYSLETKFIKGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AGIN+ K D C R ++YIGVMIDDL + G +EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGINAGLKVQGKDTWCPRRDEAYIGVMIDDLITMGTMEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R K F++ + + L+S + Sbjct: 427 RMFTSRAEYRLLLREDNADLRLTEKGRQLGVVDDDRWKIFSEKRESIDKEIKRLESTWIQ 486 Query: 485 SKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 K + ++ D Y + + P + ++ I K V E+++I+ Sbjct: 487 PKTVEGDIVNSLVDQAITREYSLKDLVKRPGVNYIDVAGIKGTVTK-DPQVAEQVEIQIK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y GRQ E ++ E P DFDY S+ LSNE+KEKLS +P L +A++I G+ Sbjct: 546 YAGYIGRQADEIARLRRHENTKFPNDFDYHSIEGLSNEVKEKLSKYRPETLARAARIPGV 605 Query: 602 TPAALNLLLIYIKK 615 TPAA++LLL+++KK Sbjct: 606 TPAAISLLLVFLKK 619 >gi|312221220|emb|CBY01161.1| similar to tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Leptosphaeria maculans] Length = 693 Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust. Identities = 290/625 (46%), Positives = 394/625 (63%), Gaps = 19/625 (3%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R YDV+VIGGGHAGCEA+A +A+ GA TALIT +G SCNP+ GG+GKG ++REID Sbjct: 40 RPYDVVVIGGGHAGCEASAASARTGARTALITPSLDNLGVCSCNPSFGGIGKGTMLREID 99 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDG++GR+ D AG+QFRVLN KKGPAV GPR Q DR LY+ M+ EIL + L V+ G Sbjct: 100 ALDGVVGRIVDKAGVQFRVLNRKKGPAVWGPRAQIDRSLYKKYMKEEILGYQGLSVVPGS 159 Query: 124 VAGFNTEKNI----------ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGR 173 VA +++ I+ + ++ ++ VV+TTGTFL G IHIG P+GR Sbjct: 160 VADIIVDRSDEARREGRYGRITGVRLESGELVMTENVVITTGTFLGGEIHIGLEAFPSGR 219 Query: 174 MGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI 233 MG++ + L S F GRLKTGTP RLDGKTI + + Q D+ +PFS++ D++ Sbjct: 220 MGEAATFGLSKSLRDAGFTLGRLKTGTPPRLDGKTIDYKVLDAQEGDDPPMPFSYLNDRV 279 Query: 234 TNRQIECGI----TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERN 289 Q+E + TRTN +H II +N+ S +K GPRYCPS+E K++RF ++ Sbjct: 280 ---QVENQLLNYETRTNEASHDIIRKNLDKSIHIRETVK--GPRYCPSLESKVIRFADKT 334 Query: 290 GHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPK 349 H ++LEPEG +TDV+YPNGIS +P ++Q ++TI GLE V +++PGY +EYDY++P+ Sbjct: 335 SHIVWLEPEGFDTDVIYPNGISCTVPADVQLAMLKTIKGLENVKVLQPGYGVEYDYVDPR 394 Query: 350 ELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIG 409 L TLETK ISGLFLAGQINGTTGYEEAA QG+VAGIN+ KS D + SR D YIG Sbjct: 395 HLRSTLETKNISGLFLAGQINGTTGYEEAAGQGIVAGINAGLKSLHKDPLVLSRADGYIG 454 Query: 410 VMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQ 469 +MIDDL +KGV EPYRMFTSR+EYR+S R DNAD RLTP+G G I R + Q Sbjct: 455 IMIDDLITKGVSEPYRMFTSRSEYRMSSRADNADTRLTPLGHAAGVITNTRWSAYTSERQ 514 Query: 470 EYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFS 529 + L LL+S L+ + + + D R+AYE L PD S +L + P + F Sbjct: 515 QIEALTQLLQSKTLSWTAWNEAGHAVRNDSTKRSAYEILRLPDTSPTDLIPLLPQIKDFP 574 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 + R+ I ++YA Y Q +E +P D +Y ++ LS E K L + +P Sbjct: 575 ERIRNRVHINATYAPYVAYQAAAQARWLRDEHLRLPADIEYENIFGLSFEEKRALEVARP 634 Query: 590 FNLLQASKIEGMTPAALNLLLIYIK 614 ++ A ++EG+TP LL +++ Sbjct: 635 ESVGMARRVEGVTPTGALRLLQFVR 659 >gi|78224742|ref|YP_386489.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Geobacter metallireducens GS-15] gi|123570637|sp|Q39PR0|MNMG_GEOMG RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|78195997|gb|ABB33764.1| Glucose-inhibited division protein A subfamily [Geobacter metallireducens GS-15] Length = 624 Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust. Identities = 297/618 (48%), Positives = 399/618 (64%), Gaps = 9/618 (1%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 ++ YDVIV+G GHAGCEAA AA++G T L+T I MSCNPAIGG KGHLV+EI Sbjct: 7 DKQYDVIVVGAGHAGCEAALAAARMGCETLLLTINLDAIALMSCNPAIGGSAKGHLVKEI 66 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G MG+ DA GIQFR+LN +KGPAVR R QAD++LYRL M+ + QE L + Q Sbjct: 67 DALGGEMGKNIDATGIQFRILNTRKGPAVRASRAQADKQLYRLRMKHVMEQQERLSLKQA 126 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 EV G E + + + +TV+LTTGTF+RG+IH+G P GR GD PS L Sbjct: 127 EVTGIVVEDGEVRGVDTKVGVRYLGATVILTTGTFMRGLIHVGLTNYPGGRAGDLPSVGL 186 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGI 242 + + F GRLKTGTPARLDG+TI + + E Q D+ +PFSF T++I Q+ C I Sbjct: 187 SDQLRELGFAVGRLKTGTPARLDGRTIDFTRLEPQHGDDPPVPFSFSTERIDQPQVPCYI 246 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 TN +H II + S +Y+G I+ GPRYCPSIEDK+VRF E++ HQ FLEPEG +T Sbjct: 247 AYTNPRSHEIIRSGLDRSPLYAGVIEGIGPRYCPSIEDKVVRFPEKDRHQTFLEPEGRDT 306 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 YP+G+ST+LP +IQ F R+I GLE+V I+RP YAIEYDY++P +L +LETK + Sbjct: 307 VEYYPSGLSTSLPIDIQWAFYRSIEGLERVEIMRPAYAIEYDYVDPIQLHASLETKLVRN 366 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQINGT+GYEEAA QGL+AGIN+A + + + R+++YIGVMIDDL + G E Sbjct: 367 LYHAGQINGTSGYEEAAGQGLMAGINAALRVRDKEPLILGRSEAYIGVMIDDLVTLGTRE 426 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RL G +G + E +RF + + + LK Sbjct: 427 PYRMFTSRAEYRLLLREDNADLRLRERGHAVGLVPEGAYQRFLEKRERIGAELARLKGTK 486 Query: 483 LTSKN-----LSSTSISFKQDGKTRTAYE-FLSYPDFSIQNLFSICPDARKFSSLVIERL 536 L L++ S++ Q+ T YE L PD + + L I P A + +V E++ Sbjct: 487 LLPSEADPDFLAAFSLTALQNALT---YEQLLRRPDITYEELCRIDPRAAEVPPVVREQV 543 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y Y RQ+ + + + E +P FDY +LP LS E++EKL+ +P L QAS Sbjct: 544 EIQIKYQGYIERQLDQVERARKLEGTRVPAGFDYGALPGLSAEVREKLAKFRPDTLGQAS 603 Query: 597 KIEGMTPAALNLLLIYIK 614 +I+G+TPAA+ +L + +K Sbjct: 604 RIQGVTPAAVGILSLALK 621 >gi|240950029|ref|ZP_04754337.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Actinobacillus minor NM305] gi|240295507|gb|EER46250.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Actinobacillus minor NM305] Length = 630 Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust. Identities = 297/619 (47%), Positives = 387/619 (62%), Gaps = 5/619 (0%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 N++YDVIV+GGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+EI Sbjct: 4 NKTYDVIVVGGGHAGTEAALAPARMGLKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKEI 63 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DA+ GLM D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q Sbjct: 64 DAMGGLMATATDKAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIFQQ 123 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 EV E N V + + V+LT GTFL G IHIG GR GD + L Sbjct: 124 EVVDILVENNRAVGAVTKMGLTFKAKAVILTAGTFLAGKIHIGLDNYAGGRAGDPAATML 183 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQIECG 241 + + RLKTGTP RLD +TI +D KQ DE L SFM + + RQI C Sbjct: 184 ADRLRDLNLRVDRLKTGTPPRLDARTINFDVLAKQHGDEVLPVMSFMGSVEQHPRQIPCY 243 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT TN +TH +I ++ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL Sbjct: 244 ITHTNEQTHDLIRNSLDRSPMYTGIIEGIGPRYCPSIEDKVMRFSDRNSHQIYLEPEGLT 303 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T VYPNGIST+LP ++Q + ++ GLE II+PGYAIEYDY +P++L PTLETK I Sbjct: 304 TIEVYPNGISTSLPFDVQMGIVNSMKGLENTRIIKPGYAIEYDYFDPRDLKPTLETKAID 363 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQINGTTGYEEAAAQGL+AGIN+ + D +R +Y GV++DDL + G Sbjct: 364 GLFFAGQINGTTGYEEAAAQGLLAGINAGLQVQGKDAWFPTRDLAYTGVLVDDLCTLGTK 423 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+FTSRAEYR+ LR DNAD RLTPI + G I E R RF + ++ ++ LK Sbjct: 424 EPYRVFTSRAEYRLLLREDNADARLTPIAHQFGLIDEARWARFNEKMENIEKEKARLKQT 483 Query: 482 V--LTSKNLSSTSISFKQD-GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VIERLQ 537 L NL+ + + + + + P+ + + L I P A E+++ Sbjct: 484 WAHLQMANLAEVNALLNSPLAREASGEDLIRRPEVTYEALTQIAPFAPAIEDKEAAEQVE 543 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I Y Y Q E + K E IP +FDY + +LSNE++ KL +P ++ QAS+ Sbjct: 544 ISIKYQGYIEHQQQEIERHKRHENTQIPAEFDYDKVESLSNEVRAKLMQHRPVSIGQASR 603 Query: 598 IEGMTPAALNLLLIYIKKN 616 I G+TPAA+++LL+ +KK Sbjct: 604 ISGITPAAISILLVNLKKQ 622 >gi|312964009|ref|ZP_07778480.1| glucose inhibited division protein A [Pseudomonas fluorescens WH6] gi|311282044|gb|EFQ60654.1| glucose inhibited division protein A [Pseudomonas fluorescens WH6] Length = 630 Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust. Identities = 290/614 (47%), Positives = 388/614 (63%), Gaps = 5/614 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G+MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGAMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGVMAMATDKGGIQFRVLNSRKGPAVRATRAQADRILYKAAVRETLENQPNLWIFQQAAD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++++ +V Q +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 127 DLIVEQDVVKGVVTQMGLRFFAQSVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAKR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SFM K + +Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQAGDTPIPVMSFMGSKEQHPKQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 247 TNAHTHEIIAANLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +++I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQIQIVQSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGKDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F K + LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCKKRESITLEEQRLKSTWVR 486 Query: 485 SKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +I+ K Y LS P+ L + + V E+++I++ Sbjct: 487 PGTEQGDAIAEKFGTPLTHEYNLLNLLSRPEIDYAGLVEVTGSGAE-DPQVAEQVEIKTK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E ++ E +P D DY+ + LS E++ KL I +P L QAS+I G+ Sbjct: 546 YAGYIDRQQDEIARLRASEDTKLPMDIDYTGISGLSKEIQSKLGITRPETLGQASRIPGV 605 Query: 602 TPAALNLLLIYIKK 615 TPAA++LL+I++KK Sbjct: 606 TPAAISLLMIHLKK 619 >gi|315635268|ref|ZP_07890545.1| glucose inhibited division protein A [Aggregatibacter segnis ATCC 33393] gi|315476014|gb|EFU66769.1| glucose inhibited division protein A [Aggregatibacter segnis ATCC 33393] Length = 629 Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust. Identities = 295/617 (47%), Positives = 394/617 (63%), Gaps = 5/617 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIGGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLVREIDA Sbjct: 6 TYDVIVIGGGHAGTEAALAPARMGLKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVREIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 + GLM AD AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q EV Sbjct: 66 MGGLMATAADQAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRIALENQPNLDIFQQEV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + E++ + +V + +V+LT GTFL G IHIG GR GD S +L + Sbjct: 126 SDILVEQDRATGVVTKMGLKFHAKSVILTAGTFLAGKIHIGLENYEGGRAGDPASVTLSH 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 RLKTGTP R+D +TI + +Q D L FSFM + RQI C IT Sbjct: 186 RLRDLGLRVDRLKTGTPPRIDARTIDFSVLAEQHGDAELPIFSFMGSVDQHPRQIPCFIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL T+ Sbjct: 246 HTNEKTHEVIRNNLDRSPMYTGVIEGIGPRYCPSIEDKVMRFADRNSHQIYLEPEGLTTN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q + ++ GLE II+PGYAIEYDY +P++L PTLETK I GL Sbjct: 306 EIYPNGISTSLPFDVQMGIVNSMKGLENARIIKPGYAIEYDYFDPRDLKPTLETKSIQGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAA+QGL+AGIN+ + + R +Y+GV++DDL + G EP Sbjct: 366 FFAGQINGTTGYEEAASQGLLAGINAGLYVQEKEVWFPRRDQAYMGVLVDDLCTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+FTSRAEYR+ LR DNAD RLTPI +LG I E R RF + ++ R L+S+ L Sbjct: 426 YRVFTSRAEYRLLLREDNADIRLTPIAHELGLIDEARWARFNQKMENIEQERQRLRSIWL 485 Query: 484 TSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VIERLQIE 539 ++ + + + + + L P+ + Q L ++ P + IE+++I Sbjct: 486 HPRSEYLEEANQVLGSPLVREASGEDLLRRPEINYQILTALTPFQPPMADKEAIEQVEIS 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y Q E ++ K E IP +FDYS + LSNE++ KL +P ++ QAS+I Sbjct: 546 IKYQGYIEHQQDEIEKQKRHENTAIPPNFDYSKVAGLSNEVRIKLEQHRPVSIGQASRIS 605 Query: 600 GMTPAALNLLLIYIKKN 616 G+TPAA++++L+ +KK Sbjct: 606 GITPAAISIILVNLKKQ 622 >gi|269140865|ref|YP_003297566.1| glucose-inhibited cell division protein A (tRNA uridine 5-carboxymethylaminomethyl modification enzyme) [Edwardsiella tarda EIB202] gi|267986526|gb|ACY86355.1| glucose-inhibited cell division protein A (tRNA uridine 5-carboxymethylaminomethyl modification enzyme) [Edwardsiella tarda EIB202] gi|304560623|gb|ADM43287.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Edwardsiella tarda FL6-60] Length = 629 Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust. Identities = 290/621 (46%), Positives = 393/621 (63%), Gaps = 15/621 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMASARMGRQTLLLTHNIDTLGHMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D GIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAQAIDKGGIQFRILNGSKGPAVRATRAQADRVLYRQAVRMALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLNGKIHIGLENYSGGRAGDPPSIGLARR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP RLD +TI + +Q D FSF+ D + RQ+ C IT Sbjct: 187 LRELPLRVNRLKTGTPPRLDARTIDFSVLAQQHGDNPAPVFSFLGDASQHPRQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL+++ Sbjct: 247 TNEHTHEVIRSNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLSSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q +R++ G++ I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMAIVRSMEGMQNTRIVRPGYAIEYDFFDPRDLKPTLESKYIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+ R + +D R ++Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAGRCAADVDGWAPRRDEAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLTPIG +LG + + R +F + ++ R L+ + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTPIGRELGLVDDVRWAQFNQKLENMERERQRLRETWVH 486 Query: 485 SKN--------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIER 535 + L T +S + G+ + L P+ L S+ P + + E+ Sbjct: 487 PQGEQAAEVNALLKTPLSREASGE-----DLLRRPEMDYATLTSLSPFSPPLADRQAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y RQ E ++ + E +P D DY + LSNE+ KL+ KP ++ QA Sbjct: 542 VEIQVKYQGYIARQQDEIEKQQRNENTRLPADLDYRQVNGLSNEVIAKLNDHKPSSIGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKKN 616 S+I G+TPAA+++LL+++KK Sbjct: 602 SRISGITPAAISILLVWLKKQ 622 >gi|295095367|emb|CBK84457.1| glucose-inhibited division protein A [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 629 Score = 566 bits (1460), Expect = e-159, Method: Compositional matrix adjust. Identities = 289/616 (46%), Positives = 398/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDHAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVSRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNAAQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARFSAEKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R LK+ + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEVGRELGLVDDERWARFNEKLERIEQERQRLKTTWVN 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VIERLQIES 540 + ++ ++ + + + L P+ + +NL + A E+++I+ Sbjct: 487 PQAETAAEVNAHLTAPLSREASGEDLLRRPEVTYENLVKLTAFAPGLEDAEAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ + E L+P+ DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQQRNENTLLPEMLDYRQVTGLSNEVIAKLNDHKPVSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKKQ 622 >gi|74318826|ref|YP_316566.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Thiobacillus denitrificans ATCC 25259] gi|123745347|sp|Q3SF55|MNMG_THIDA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|74058321|gb|AAZ98761.1| Glucose-inhibited division protein A subfamily [Thiobacillus denitrificans ATCC 25259] Length = 632 Score = 566 bits (1459), Expect = e-159, Method: Compositional matrix adjust. Identities = 291/617 (47%), Positives = 398/617 (64%), Gaps = 5/617 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 S+DVIV+GGGHAG EAA AA++GA T L+TH T+G+MSCNP+IGG+GKGHLVRE+DA Sbjct: 6 SFDVIVVGGGHAGTEAALAAARMGAKTLLLTHNIETLGAMSCNPSIGGIGKGHLVREVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D AGIQFR LN KGPAVR R QADR LY+ A+++ + +Q L + Q V Sbjct: 66 LGGAMALATDEAGIQFRTLNSSKGPAVRATRAQADRVLYKAAIRQRLENQPGLTLFQQAV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + + + Q + VVLT GTFL G++H+G AGRMGD P+ SL Sbjct: 126 DDLVLDGARVVGVKTQLGILFEARAVVLTAGTFLAGLVHVGLENFQAGRMGDPPAVSLAA 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK-ITNRQIECGIT 243 + D GRLKTGTP R+DG+TI + +T+ Q D+ FSFM D+ + Q C IT Sbjct: 186 RLRELDLPVGRLKTGTPPRIDGRTIDYSRTQVQPGDDPAPVFSFMGDRSMHPAQRPCWIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 T + TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T Sbjct: 246 HTTVATHEIIRGGLDRSPLYAGVIEGVGPRYCPSIEDKITRFADKASHQIFLEPEGLTTH 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++QH +R+IPGLE +I+RPGYAIEYDY +P+ L +LETK I+GL Sbjct: 306 EIYPNGISTSLPFDVQHAIVRSIPGLEHAHILRPGYAIEYDYYDPRNLKASLETKSIAGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+A ++ D R ++Y+GV++DDL ++GV EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGLNAALQTQGKDAWSPGRHEAYLGVLVDDLITRGVSEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT G LG + + R +F + E LKS+ + Sbjct: 426 YRMFTSRAEYRLQLREDNADMRLTETGRALGVVDDARWDQFNRKRDEVARETERLKSVWV 485 Query: 484 TSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI-CPDARKFSSLVIERLQIE 539 L ++T + + + + ++ L P+ + ++ A V E+++I Sbjct: 486 NPAILPADAATQLIGQPIEREYSLFDLLRRPNLGYAQVLALPGGGAGVADVGVAEQVEIA 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + Y Y RQ E + + +E +P D DY+ L LS E++++L +P L QAS+++ Sbjct: 546 AKYQGYIDRQNEEVDKHREQEGLRLPPDLDYTRLTGLSMEVRQRLQTAQPETLGQASRLQ 605 Query: 600 GMTPAALNLLLIYIKKN 616 G+TPAA+++LL+Y K+ Sbjct: 606 GVTPAAISVLLVYAKRG 622 >gi|238783013|ref|ZP_04627040.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Yersinia bercovieri ATCC 43970] gi|238716014|gb|EEQ07999.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Yersinia bercovieri ATCC 43970] Length = 629 Score = 566 bits (1459), Expect = e-159, Method: Compositional matrix adjust. Identities = 294/617 (47%), Positives = 398/617 (64%), Gaps = 5/617 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA Sbjct: 6 QFDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 66 LGGLMAKATDLAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQPV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + + + R VVLT GTFL G IHIG GR GD PS SL Sbjct: 126 EDLIVENDRVVGAITKMGLKFRAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPSISLSQ 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 + RLKTGTP R+D +TI + + Q D + FSF+ + + Q+ C IT Sbjct: 186 RLRELPLRVNRLKTGTPPRIDARTIDFSQLAPQLGDTPIPVFSFLGNAEQHPEQMACHIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 246 YTNEKTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNSHQIFLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q Q +R++ GLE I+RPGYAIEYD+ +P++L PTLE+K I GL Sbjct: 306 EIYPNGISTSLPFDVQMQIVRSMKGLENARIVRPGYAIEYDFFDPRDLKPTLESKYIHGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+ R +N D R ++Y+GV++DDL++ G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGLNAGRFANDEDGWSPRRDEAYLGVLVDDLSTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT +G KLG + + R F+K I++ R L+ +++ Sbjct: 426 YRMFTSRAEYRLMLREDNADLRLTEMGRKLGLVDDERWAHFSKKIEQIEKERQRLRDILV 485 Query: 484 --TSKNLSSTSISFKQD-GKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIE 539 S+N+S + K K E L P+ + L ++ + ++++I+ Sbjct: 486 HPLSENVSEINELLKAPLSKEANGEELLRRPEIDYRLLMTLPSFGPALTDPQAADQVEIQ 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ E ++ E L+P D DY + LSNE+ KL+ KP ++ QAS+I Sbjct: 546 VKYEGYIARQQEEIEKQLRNENTLLPVDLDYQQVSGLSNEVIAKLNDHKPNSIGQASRIS 605 Query: 600 GMTPAALNLLLIYIKKN 616 G+TPAA+++LL+++KK Sbjct: 606 GITPAAISILLVWLKKQ 622 >gi|256823852|ref|YP_003147815.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Kangiella koreensis DSM 16069] gi|256797391|gb|ACV28047.1| glucose inhibited division protein A [Kangiella koreensis DSM 16069] Length = 628 Score = 566 bits (1459), Expect = e-159, Method: Compositional matrix adjust. Identities = 299/617 (48%), Positives = 396/617 (64%), Gaps = 9/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 Y VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDAL Sbjct: 7 YSVIVIGGGHAGTEAALASARMGVKTLLLTHNIETLGQMSCNPAIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREIL-SQENLDVIQGEV 124 G M + D AGIQFR LN KGPAVR R QADR LYR A+ REIL +Q NL + Q V Sbjct: 67 GGAMAQAIDRAGIQFRTLNASKGPAVRATRAQADRGLYRSAI-REILENQPNLTIFQNAV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E++ + + Q +VVLT GTFL G+IHIG GR GD PS +L + Sbjct: 126 VDLIVEQDKVQGVKTQMGLDFYAPSVVLTVGTFLGGLIHIGMQNHSGGRAGDPPSIALAD 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQIECGIT 243 + F RLKTGTP R+D K++ + E+Q D + FSFM T RQI C IT Sbjct: 186 RLRELPFRVDRLKTGTPPRIDAKSVDFSVMEEQAGDNPVPTFSFMGTADQHPRQISCWIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +YSG I+ GPRYCPSIEDKI+RF ++N HQIF+EPEGLN++ Sbjct: 246 HTNDATHDIIRSGLDRSPMYSGVIEGVGPRYCPSIEDKIMRFSDKNSHQIFVEPEGLNSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q +R+I G E +I RPGYAIEYDY +P++L +LETK I GL Sbjct: 306 ELYPNGISTSLPFDVQMDLVRSIKGFENAHITRPGYAIEYDYFDPRDLKASLETKFIDGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEA AQGL+AG+N+A + + R +YIGV+IDDL ++G EP Sbjct: 366 FFAGQINGTTGYEEAGAQGLIAGMNAALQVQDKEAWSPRRDQAYIGVLIDDLITRGTQEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT G +LG + + R F+ + + +K+LV+ Sbjct: 426 YRMFTSRAEYRLILREDNADLRLTEKGRELGMVSDDRWSAFSDKKEAIERETARIKNLVV 485 Query: 484 TSKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSICPD--ARKFSSLVIERLQI 538 + + ++ + + AY E L PD + L ++ P + + V E+++I Sbjct: 486 QPDSPAGQQLNQQLEKPLSRAYKGEELLRRPDVTYAGLMAL-PGMIEQPVPAKVAEQVEI 544 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + Y+ Y RQ E + E ++PKD DYS + LSNE+ +KL +KP + QA ++ Sbjct: 545 QIKYSGYIDRQKDEIERSLRNENTVLPKDLDYSQVKGLSNEVVQKLMNIKPETIGQAGRV 604 Query: 599 EGMTPAALNLLLIYIKK 615 G+TPAA++LLL+++KK Sbjct: 605 SGVTPAAISLLLVHLKK 621 >gi|238787871|ref|ZP_04631668.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Yersinia frederiksenii ATCC 33641] gi|238724214|gb|EEQ15857.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Yersinia frederiksenii ATCC 33641] Length = 629 Score = 566 bits (1459), Expect = e-159, Method: Compositional matrix adjust. Identities = 296/615 (48%), Positives = 398/615 (64%), Gaps = 5/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAMATDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQPVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V + R VVLT GTFL G IHIG GR GD PS SL Sbjct: 127 DLIVENDHVVGAVTKMGLKFRAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPSISLSQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +TI + + Q D + FSF+ + + Q+ C IT Sbjct: 187 LRELPLRVNRLKTGTPPRIDARTIDFSQLAPQLGDTPIPVFSFLGNAEQHPEQMACHITY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNSHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ GLE I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMKGLENARIVRPGYAIEYDFFDPRDLKPTLESKYIHGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+ R +N D R ++Y+GV++DDL++ G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAGRFANDDDGWSPRRDEAYLGVLVDDLSTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL- 483 RMFTSRAEYR+ LR DNAD RLT +G KLG + + R + F+K I++ R L+ + + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEMGRKLGLVDDVRWEHFSKKIEQIEKERQRLRDIWVH 486 Query: 484 -TSKNLSSTSISFKQD-GKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 S+N+S + K K E L P+ + L ++ + ++++I+ Sbjct: 487 PHSENVSEINALLKAPLSKEANGEELLRRPEIDYRLLTTLPSFGPALTDPQAADQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P D DYS + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQEEIEKQLRNENTLLPTDLDYSQVSGLSNEVIAKLNDHKPNSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKK 615 +TPAA+++LL+++KK Sbjct: 607 ITPAAISILLVWLKK 621 >gi|237729052|ref|ZP_04559533.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Citrobacter sp. 30_2] gi|226909674|gb|EEH95592.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Citrobacter sp. 30_2] Length = 629 Score = 566 bits (1458), Expect = e-159, Method: Compositional matrix adjust. Identities = 293/616 (47%), Positives = 395/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDHAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +TI + +Q +D + FSF+ D + RQ+ C IT Sbjct: 187 LRELPLRVSRLKTGTPPRIDARTIDFSVLGQQNSDNPMPVFSFLGDASQHPRQMPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENARIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQG++AG+N+AR S + + R +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGMLAGLNAARLSAEKEGWAPRRDQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLERIEQERQRLKSTWVN 486 Query: 485 SKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 S+ ++ + + + L PD + L S+ A + E+++I+ Sbjct: 487 PLAESAAEVNAHLATPLSREASGEDLLRRPDMTYAQLTSLSAFAPALDDAQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ+ E + + E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQLEEIERQQRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPVSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 ITPAAISILLVWLKKQ 622 >gi|292490169|ref|YP_003533064.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Erwinia amylovora CFBP1430] gi|292901171|ref|YP_003540540.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Erwinia amylovora ATCC 49946] gi|291201019|emb|CBJ48158.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme (glucose-inhibited division protein A) [Erwinia amylovora ATCC 49946] gi|291555611|emb|CBA24238.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Erwinia amylovora CFBP1430] Length = 629 Score = 566 bits (1458), Expect = e-159, Method: Compositional matrix adjust. Identities = 296/616 (48%), Positives = 389/616 (63%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIVIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLMG D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMGHAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLLVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGMDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +T+ + Q D L FSFM D + RQ+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTVDFSVLAPQHGDTPLPVFSFMGDVSQHPRQVPCYITY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH++I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHQVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMHGMENAKIVRPGYAIEYDFFDPRDLKPTLESKYIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+ R S + R +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAGRLSADKESWAPRRDQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R RF + ++ R L+ + + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEAGRELGLVDDARWARFNEKLESIELERQRLRDIWVH 486 Query: 485 SKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICP-DARKFSSLVIERLQIES 540 K+ S+ K + + L P+ + Q L ++ + E+++I+ Sbjct: 487 PKSECVAEVNSVISAALTKEASGEDLLRRPEMTYQQLMTLKHFAPALADAQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E E ++P D DY + LSNE KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQEEIDRQLRNENTVLPVDLDYQQVSGLSNEAIAKLNDHKPGSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LLIY+KK Sbjct: 607 ITPAAISILLIYLKKQ 622 >gi|90023652|ref|YP_529479.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Saccharophagus degradans 2-40] gi|123395363|sp|Q21DG2|MNMG_SACD2 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|89953252|gb|ABD83267.1| glucose inhibited division protein A [Saccharophagus degradans 2-40] Length = 630 Score = 566 bits (1458), Expect = e-159, Method: Compositional matrix adjust. Identities = 289/625 (46%), Positives = 394/625 (63%), Gaps = 5/625 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAG EA AA++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 YDVIVIGGGHAGTEACLAAARMGCKTLLLTHNIETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN +KGPAVR R QADR LY+ A++ + +Q NLD+ Q Sbjct: 67 GGAMALATDKGGIQFRILNSRKGPAVRATRAQADRALYKAAVREILENQPNLDIFQQAAD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E ++ + Q + TVVLT GTFL G IHIG GR GD PS +L + Sbjct: 127 DLVVEGERVTGVTTQMGVTFKAPTVVLTAGTFLGGKIHIGMENHSGGRAGDPPSIALASR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +++ +D EKQ+ +E+ S+M + Q C IT Sbjct: 187 LRELPLRVDRLKTGTPPRIDARSVNFDGLEKQWGEEKTPVMSYMGSLADHPEQTCCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH I S +++G I+ GPRYCPSIEDK+ RF +++ HQIF+EPEGL T Sbjct: 247 TNAQTHDFIRSGFDRSPMFTGVIEGVGPRYCPSIEDKVNRFADKDSHQIFIEPEGLKTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q F+R+I G E +I RPGYAIEYD+ +P++L + ETK I GLF Sbjct: 307 LYPNGISTSLPFDVQMAFVRSIKGFENAHITRPGYAIEYDFFDPRDLKYSFETKHIEGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG+N+A K+ + C R ++YIGV+ DDL S G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGLNAALKAQGKEAWCPRRDEAYIGVLADDLISMGTREPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R + F K + +++ + Sbjct: 427 RMFTSRAEYRLLLREDNADMRLTEKGRELGLVDDARWQAFCKKREAIELETQRMRTTWIQ 486 Query: 485 SKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 + + +++ K + Y + L P+ + +L S+ +A V E+++I + Sbjct: 487 PNSAEANALAAKMPAELAREYSLLDLLKRPELTYDDLGSLKGEAVS-DPQVAEQVEINTK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ + + ++ E +IP +FDY S+ LSNELK+KLS +P L +AS+I G+ Sbjct: 546 YAGYINRQTDDIERMRQHENTVIPVEFDYMSVEGLSNELKQKLSEARPETLSRASRIPGV 605 Query: 602 TPAALNLLLIYIKKNTVKLNEIVLV 626 TPAA++L+LIY+KK + N+ L Sbjct: 606 TPAAVSLILIYLKKRGLLKNKAALA 630 >gi|71065797|ref|YP_264524.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Psychrobacter arcticus 273-4] gi|123648515|sp|Q4FSB8|MNMG_PSYA2 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|71038782|gb|AAZ19090.1| putative glucose inhibited division protein A [Psychrobacter arcticus 273-4] Length = 632 Score = 566 bits (1458), Expect = e-159, Method: Compositional matrix adjust. Identities = 295/620 (47%), Positives = 392/620 (63%), Gaps = 9/620 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDV+VIGGGHAG EAA AA++GA T L+TH T+G MSCNPAIGG+GK HLVREID Sbjct: 5 KNYDVVVIGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPAIGGIGKSHLVREID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFRVLN +KG AVR R QADR LY+ A++ + +Q NLD+ Q Sbjct: 65 ALGGAMALATDKSGIQFRVLNSRKGAAVRATRAQADRILYKAAIRHTLENQPNLDIFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 E +++V + TVVLT+GTFL GVIHIG GR GD PS L Sbjct: 125 ADDILVENGRATAVVTATGIIFNTQTVVLTSGTFLGGVIHIGLESSKGGRAGDQPSIKLA 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + + GRLKTGTPAR+D +++ + Q D L S+M D + Q+ C I Sbjct: 185 DRLRELKLPVGRLKTGTPARIDARSVDFSVMAVQPGDTPLPVMSYMGDVSMHPEQVNCYI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II EN+ S ++SG I+ GPRYCPSIEDKI RF +++ HQIF+EPEGL T Sbjct: 245 THTNARTHDIIRENLDRSPMFSGKIEGVGPRYCPSIEDKIHRFADKDSHQIFIEPEGLTT 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNGIST+LP ++Q +FI ++ GLE +I RPGYAIEYDY +P+ L PTLETK I Sbjct: 305 HELYPNGISTSLPFDVQLEFIHSMKGLENAHITRPGYAIEYDYFDPQNLKPTLETKSIDR 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSAR---KSNKLDCICFSRTDSYIGVMIDDLTSKG 419 L+ AGQINGTTGYEEA QGL+AG N+A ++++ D R ++Y+GV++DDL + G Sbjct: 365 LYFAGQINGTTGYEEAGVQGLLAGTNAALVTCENSEFDVWTPRRDEAYLGVLVDDLITHG 424 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT G KLG + + R + + + ++ S LK Sbjct: 425 TTEPYRMFTSRAEYRLLLREDNADQRLTETGRKLGLVDDVRWQAYEEKMEAIASETSRLK 484 Query: 480 SLVLTSKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 + T N ++ + K TAY+ L P ++ +I + S V E++ Sbjct: 485 DIWATPINALGAQVTAQTGEVLSKESTAYDLLKRPQIHFNDIAAIT--GSEVDSQVGEQI 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I YA Y RQ + ++K E +P DFDYS + LSNE+ +KL+ ++P L QA Sbjct: 543 EISVKYAGYIDRQQEDIDQMKRLENTALPMDFDYSVVSGLSNEIVQKLAQVRPSTLAQAG 602 Query: 597 KIEGMTPAALNLLLIYIKKN 616 +I G+TPAA+ LL + +KK Sbjct: 603 RISGVTPAAIQLLAMTVKKQ 622 >gi|329298811|ref|ZP_08256147.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Plautia stali symbiont] Length = 628 Score = 566 bits (1458), Expect = e-159, Method: Compositional matrix adjust. Identities = 298/615 (48%), Positives = 390/615 (63%), Gaps = 4/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIVIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMASAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + I V Q R TVVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRIVGAVTQMGLKFRAKTVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLAKR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 RLKTGTP R+D +TI + Q D+ + FSFM + +Q+ C IT Sbjct: 187 LRALPLRVNRLKTGTPPRIDARTIDFSVLTPQHGDDPMPVFSFMGYAGQHPQQVPCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNELTHEVIHNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ GLE I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMKGLENAKIVRPGYAIEYDFFDPRDLKPTLESKFIHGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL AG+N+AR+S + R +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLQAGLNAARQSADKEGWAARRDQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL- 483 RMFTSRAEYR+ LR DNAD RLT G +LG + + R R+ + ++ R L+ L + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTETGRELGLVDDARWARYNQKLEAIEQERQRLRDLWVH 486 Query: 484 -TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIESS 541 S+N+S + K +A + L P+ + + L + + E+++I+ Sbjct: 487 PKSENVSEVNTVISALTKEASAEDLLRRPEMTYELLMLLPSYGPALADEQAAEQVEIQVK 546 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y RQ E + E L+P D DY + LSNE+ KL+ KP ++ QAS+I G+ Sbjct: 547 YEGYIARQQEEIDRQQRNENTLLPADLDYRQVNGLSNEVIAKLNDHKPTSIGQASRISGI 606 Query: 602 TPAALNLLLIYIKKN 616 TPAA+++LLIY+KK Sbjct: 607 TPAAISILLIYLKKQ 621 >gi|322835093|ref|YP_004215120.1| glucose inhibited division protein A [Rahnella sp. Y9602] gi|321170294|gb|ADW75993.1| glucose inhibited division protein A [Rahnella sp. Y9602] Length = 629 Score = 566 bits (1458), Expect = e-159, Method: Compositional matrix adjust. Identities = 291/616 (47%), Positives = 395/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMASARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMATAIDHAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQPVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V + R VVLT GTFL G IHIG GR GD P+ SL Sbjct: 127 DLIVENDRVVGAVTKMGLKFRAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPAISLSQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +TI + +Q D FSFM + + RQI C +T Sbjct: 187 LRELPLRVNRLKTGTPPRIDARTIDFSVLAQQHGDNPAPVFSFMGNVSQHPRQIPCYMTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNSHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 VYPNGISTSLPFDVQMQIVRSMQGMENAVIVRPGYAIEYDFFDPRDLKPTLESKFIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR +++ + R +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGMNAARSASEEEGWAPRRDQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R RF + ++ R L+ + + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEKGRELGLVDDARWARFNEKLEMIEQERQRLRGIWVN 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VIERLQIES 540 + I+ K +A E L P+ + + + + P A + E+++I+ Sbjct: 487 PHHAQVEEINAHLSAPLSKEASAEELLRRPEMTYELITRLSPFAPSVPDVQAAEQVEIQI 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ + E ++P D DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQEEIEKQQRNENTVLPVDLDYRQVNGLSNEVIAKLNDHKPTSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LLI++KK Sbjct: 607 ITPAAISILLIWLKKQ 622 >gi|321474459|gb|EFX85424.1| hypothetical protein DAPPUDRAFT_45739 [Daphnia pulex] Length = 671 Score = 566 bits (1458), Expect = e-159, Method: Compositional matrix adjust. Identities = 306/633 (48%), Positives = 406/633 (64%), Gaps = 28/633 (4%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EA A AA++G T L+THK TIG MSCNP+ GG+GKGHL+RE+D Sbjct: 37 KNYDVIVVGGGHAGTEACAAAARMGCKTLLLTHKIETIGEMSCNPSFGGIGKGHLMREVD 96 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDG+ GR+ D +GIQ++VLN +KGPAV GPR Q DR LY+ +Q E+ NL++ Sbjct: 97 ALDGVCGRICDLSGIQYKVLNRRKGPAVWGPRAQIDRNLYKKHLQAELFETPNLEIRAAA 156 Query: 124 VAGFNTEK----NIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 V E +++ D++ I +VV+TTGTFLRG I+IG PAGRMGD P+ Sbjct: 157 VEDLIVENIDGHETCLGVLLADDTKISSRSVVITTGTFLRGQINIGLETYPAGRMGDKPA 216 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI---TNR 236 L ++ + F GRLKTGTP RLDG+TI + E Q D+ IPFSFM D++ N Sbjct: 217 IGLSHTLERLQFKLGRLKTGTPPRLDGRTIDYSVCEIQRGDDPPIPFSFMNDRVWIEPND 276 Query: 237 QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLE 296 Q+ C ITRT+ RII++N+ + + GPRYCPSIE K++RFG R HQ++LE Sbjct: 277 QVNCHITRTSPAMERIILDNLHLDRHVQEETR--GPRYCPSIESKMLRFGGRR-HQVWLE 333 Query: 297 PEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLE 356 PE L+ VVYPNG+S LP E+Q Q +RTIPGLEKV +IRPGY +EYDYI+P+++ TLE Sbjct: 334 PESLDNHVVYPNGLSCTLPAELQFQMLRTIPGLEKVEMIRPGYGVEYDYIDPRQIRKTLE 393 Query: 357 TKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 TK ++GLF AGQINGTTGYEEAAAQG++AG+N+ K + RT+ YIGV+IDDLT Sbjct: 394 TKPVNGLFFAGQINGTTGYEEAAAQGIIAGLNAGLKVKNMPSFTIDRTEGYIGVLIDDLT 453 Query: 417 SKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYN---- 472 G EPYRMFTSRAE+R+SLRPDNAD RLT GC+ + R R +N Sbjct: 454 RIGAPEPYRMFTSRAEFRLSLRPDNADFRLTEKAFPTGCVSQARYDRCVNTRLTHNDAVT 513 Query: 473 FLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYP----DFSIQNLFSICPDARKF 528 L+S+ + L + K L S+ + R A+E L+ P ++ L SI D R Sbjct: 514 LLKSIKRPLSVWRKML---SLPATKTATHRNAFELLALPWQQDGITVALLDSILADGR-L 569 Query: 529 SSLV-----IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDY-SSLPALSNELKE 582 S LV +RLQIES Y+ Q + +I+ EE IP D DY S +LSNE + Sbjct: 570 SHLVSDPLLCQRLQIESLYSNAIDDQEGDVVQIRAEEALAIPDDIDYLESSMSLSNEERN 629 Query: 583 KLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 KL+ +P + AS+I G+TP+A+ +L Y+ + Sbjct: 630 KLNEARPQTIGAASRISGVTPSAILTILQYLNR 662 >gi|296105465|ref|YP_003615611.1| glucose-inhibited division protein A [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059924|gb|ADF64662.1| glucose-inhibited division protein A [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 629 Score = 566 bits (1458), Expect = e-159, Method: Compositional matrix adjust. Identities = 289/616 (46%), Positives = 398/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDHAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVSRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNAAQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIHGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARFSAEKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R LK+ + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEMGRELGLVDDERWARFNEKLERIEQERQRLKTTWVN 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VIERLQIES 540 + ++ ++ + + + L P+ + +NL + A E+++I+ Sbjct: 487 PQAETAAEVNAHLTAPLSREASGEDLLRRPEVTYENLVKLTAFAPGLEDAEAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ + E L+P+ DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQQRNENTLLPEMLDYRQVTGLSNEVIAKLNDHKPVSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKKQ 622 >gi|319944931|ref|ZP_08019193.1| glucose inhibited division protein A [Lautropia mirabilis ATCC 51599] gi|319741501|gb|EFV93926.1| glucose inhibited division protein A [Lautropia mirabilis ATCC 51599] Length = 680 Score = 565 bits (1457), Expect = e-159, Method: Compositional matrix adjust. Identities = 292/643 (45%), Positives = 409/643 (63%), Gaps = 36/643 (5%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EA+ VAA+ GA T L++H T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 8 FDVIVVGGGHAGTEASLVAARTGAKTLLLSHNLDTLGQMSCNPSIGGIGKGHLVKEVDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+M D AGIQFR+LN KGPAVR R QADR LYR A+++ + +Q N+ + Q V Sbjct: 68 GGVMAVATDHAGIQFRILNASKGPAVRATRAQADRVLYRQAIRQALENQPNMTLFQQAVD 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + ++ Q R VVLT GTFL G +H+G AGR D + +L Sbjct: 128 DLLLEGDRVVGVITQLGIQFRAKAVVLTAGTFLNGKVHVGLDNYEAGRAADPSAKTLAAR 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFM--TDKITNRQIECGI 242 + GRLKTGTP R+DGKTI + + Q D +P FSF+ D+ RQ+ C I Sbjct: 188 LRELALPQGRLKTGTPPRIDGKTIDYSRLGIQPGDLDPVPVFSFIGCADQ-HPRQLPCWI 246 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II + + S +++G I+ GPRYCPSIEDKI RF +++ HQI+LEPEGL T Sbjct: 247 THTNARTHEIIRQALDRSPLFTGVIEGVGPRYCPSIEDKIHRFADKDSHQIYLEPEGLQT 306 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNGIST+LP + Q + ++ GLEK +I+RPGYAIEYDY +P+ L P LET++I G Sbjct: 307 HEIYPNGISTSLPFDTQLAVVHSMVGLEKAHILRPGYAIEYDYFDPRGLKPGLETRQIQG 366 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AG+N+AR+ + R +Y+GVM+DDL ++GV E Sbjct: 367 LFFAGQINGTTGYEEAAAQGLLAGLNAARQVQGKEPWVPRRDQAYMGVMLDDLLTQGVQE 426 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQ----EYNFLRSLL 478 PYRMFTSRAEYR+SLR DNAD RLT +G ++GC+ + R + F + E +R+ L Sbjct: 427 PYRMFTSRAEYRLSLREDNADLRLTELGRQMGCVDDVRWQAFTSKQEAIEREIAHMRATL 486 Query: 479 KSLVLTSKNLSSTSIS--------------------FKQDGKTRTA-YEFLSYPDFSIQN 517 + + ++ + + Q+G ++ + ++ L PD S+ Sbjct: 487 ANPQVLARLQTPQGTTQAAEEAQGASPSAPQAPAAPQGQNGTSKHSLHDLLKRPDVSLAQ 546 Query: 518 LFSICPDARKFSSL-----VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSS 572 L S+ P+ +F+ + V E+++I+ Y Y RQ +E + + +E IP D DY+ Sbjct: 547 LASLMPE--EFAEVQADPRVAEQVEIQIKYQGYIDRQKLEVQRMAQQEATPIPADLDYTQ 604 Query: 573 LPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 + LSNE+++KL +P + QA +I GMTPAA++LLL+++KK Sbjct: 605 ISGLSNEVRQKLIAQRPQTIGQAGRIPGMTPAAVSLLLVHLKK 647 >gi|293391117|ref|ZP_06635451.1| glucose-inhibited division protein A [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951651|gb|EFE01770.1| glucose-inhibited division protein A [Aggregatibacter actinomycetemcomitans D7S-1] Length = 629 Score = 565 bits (1457), Expect = e-159, Method: Compositional matrix adjust. Identities = 297/623 (47%), Positives = 390/623 (62%), Gaps = 17/623 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIGGGHAG EAA ++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA Sbjct: 6 TYDVIVIGGGHAGSEAALAPVRMGLKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 + GLM AD AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q E Sbjct: 66 MGGLMATAADKAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRIALENQPNLDIFQQEA 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E++ + +V + V+LT GTFL G IHIG GR GD S +L Sbjct: 126 TDILIEQDRATGVVTKMGLKFHAKAVILTAGTFLAGKIHIGLENYTGGRAGDPASVTLAQ 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 + RLKTGTP R+D +TI +D KQ D L FSFM + +QI C IT Sbjct: 186 RLRDLNLRVDRLKTGTPPRIDARTINFDVLAKQHGDAVLPVFSFMGSVSDHPQQIPCYIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL ++ Sbjct: 246 HTNEQTHDVIRNNLDRSPMYTGVIEGIGPRYCPSIEDKVMRFADRNSHQIYLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q + ++ GLEK I++PGYAIEYDY +P++L PTLETK ISGL Sbjct: 306 EIYPNGISTSLPFDVQMGIVNSMKGLEKARIVKPGYAIEYDYFDPRDLKPTLETKAISGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ + + R +Y+GV++DDL + G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGINAGLYVQEKEVWFPRRDQAYVGVLVDDLCTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+FTSRAEYR+ LR DNAD RLTPI KLG I E R RF + I+ R L+S+ L Sbjct: 426 YRVFTSRAEYRLLLREDNADIRLTPIAHKLGLIDEARWARFNQKIENIELERQRLRSIWL 485 Query: 484 ---------TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VI 533 +K L S + + + L P+ + + L S+ P + Sbjct: 486 HPRSEYLEEANKVLGSPLV------REANGEDLLRRPEMNYEILTSLTPYQPAMEDKEAV 539 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I Y Y Q E ++ K E IP FDY + LSNE++ KL +P ++ Sbjct: 540 EQVEIAIKYQGYIEHQEEEIEKQKRHENTEIPTQFDYVKVSGLSNEVRAKLEQHRPVSIG 599 Query: 594 QASKIEGMTPAALNLLLIYIKKN 616 QAS+I G+TPAA++++L+ +KK Sbjct: 600 QASRISGITPAAISIILVNLKKQ 622 >gi|283787570|ref|YP_003367435.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme (glucose-inhibited division protein A) [Citrobacter rodentium ICC168] gi|282951024|emb|CBG90702.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme (glucose-inhibited division protein A) [Citrobacter rodentium ICC168] Length = 629 Score = 565 bits (1457), Expect = e-159, Method: Compositional matrix adjust. Identities = 290/616 (47%), Positives = 396/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVSRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNAAQHPQQVPCYITY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIHGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEMGRELGLVDDERWARFNEKLENIERERQRLKSTWIT 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICP-DARKFSSLVIERLQIES 540 ++ ++ + + + L P+ + L ++ P + E+++I+ Sbjct: 487 PTAETAVEVNAHLTAPLSREASGEDLLRRPEMTYAQLTALSPFAPALADAQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ + E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQQRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPVSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKKQ 622 >gi|206890699|ref|YP_002248428.1| glucose-inhibited division protein A [Thermodesulfovibrio yellowstonii DSM 11347] gi|254811520|sp|B5YJL3|MNMG_THEYD RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|206742637|gb|ACI21694.1| glucose-inhibited division protein A [Thermodesulfovibrio yellowstonii DSM 11347] Length = 624 Score = 565 bits (1457), Expect = e-159, Method: Compositional matrix adjust. Identities = 300/624 (48%), Positives = 397/624 (63%), Gaps = 11/624 (1%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 + +D+IV+G GHAGCEAA AK+G TAL T TI +SCNPAIGGL KGHLVREI Sbjct: 4 EKDFDIIVVGAGHAGCEAALATAKMGLQTALFTIYLETIAQLSCNPAIGGLAKGHLVREI 63 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G+M +V D AGIQFR+LN KGPAV R QADR LY + M++ + S ENL + Q Sbjct: 64 DALGGIMAKVTDMAGIQFRMLNRSKGPAVWSLRAQADRILYNIYMRKILESTENLAIKQA 123 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 V E + I+ V++T GTFL G+IHIG AGR G+ PS L Sbjct: 124 MVEEIVVENGKVKGIITSLGVFYGAKAVIITPGTFLNGLIHIGLDSFEAGRAGEFPSKKL 183 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGI 242 S K GRLKTGTP R+D KTI + KTE+Q D+ IPFS+ T KI N Q+ C I Sbjct: 184 SESIKKLGLKMGRLKTGTPPRIDAKTIDFSKTEEQGGDDPPIPFSYSTKKINNPQVPCYI 243 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II+ N+ S +YSG IK GPRYCPSIEDK+V+F +++ HQIFLEPEGL+ Sbjct: 244 TYTNEKTHEIILNNLDRSPLYSGKIKGIGPRYCPSIEDKVVKFRDKSRHQIFLEPEGLSR 303 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 Y NGI T+LP ++Q F+RTIPGLE I+RPGYAIEYD++ P ++ TLE K I G Sbjct: 304 KEYYANGIPTSLPYDVQVAFVRTIPGLEDAEIMRPGYAIEYDFVYPTQIRHTLEVKGIEG 363 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+LAGQINGT+GYEEAAAQGL+AGIN+A K K + R ++YIGV+IDDL +KG E Sbjct: 364 LYLAGQINGTSGYEEAAAQGLMAGINAALKIKKQPPLILGRDEAYIGVLIDDLVTKGTQE 423 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAE+R+ LR DNAD RL G K+G + E + F K + L+ +K L Sbjct: 424 PYRMFTSRAEFRLLLRHDNADLRLRDYGYKIGLVDEETYEEFNK---KKELLQREIKRLK 480 Query: 483 LT----SKNLSSTSISFKQDGKTRTAY--EFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 T S+ L+ I + + + L P+ + + P + + E + Sbjct: 481 TTTIKPSEELNKALIEAQTTPVEEATFLDKLLKRPELNYDFIKKFAPSEVTLTKELEELV 540 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I Y Y +QM + +K E++LIP++FD+ ++P LS E+ +KL+ + P + QA Sbjct: 541 EIHIKYEGYIAKQMELVERMKQFEEKLIPENFDF-NIPGLSREVIQKLTEVAPRTIGQAM 599 Query: 597 KIEGMTPAALNLLLIYI-KKNTVK 619 +I G+TPAA+++L++ + KK TVK Sbjct: 600 RIPGVTPAAISILMVAVQKKTTVK 623 >gi|146313753|ref|YP_001178827.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterobacter sp. 638] gi|166989737|sp|A4WGE6|MNMG_ENT38 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|145320629|gb|ABP62776.1| glucose inhibited division protein A [Enterobacter sp. 638] Length = 629 Score = 565 bits (1457), Expect = e-159, Method: Compositional matrix adjust. Identities = 292/616 (47%), Positives = 395/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDHAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS SL Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSISLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVNRLKTGTPPRIDARTIDFSVLAQQHGDTPIPVFSFMGNAAQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQIQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + + R +Y+GV++DDL++ G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARFSAEKEGWAPRRDQAYLGVLVDDLSTMGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R LKS + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEMGRELGLVDDERWARFNEKLERIETERQRLKSTWVN 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VIERLQIES 540 S ++ + + + L P + + L + P A E+++I+ Sbjct: 487 PLADSVAEVNAHLAAPLSREASGEDLLRRPGMTYEQLVQMTPFAPGLDDAEAAEQVEIQI 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ + E L+P+ DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQQRNENTLLPEMLDYRQVTGLSNEVIAKLNDHKPVSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKKQ 622 >gi|271502656|ref|YP_003335682.1| glucose inhibited division protein A [Dickeya dadantii Ech586] gi|270346211|gb|ACZ78976.1| glucose inhibited division protein A [Dickeya dadantii Ech586] Length = 629 Score = 565 bits (1457), Expect = e-159, Method: Compositional matrix adjust. Identities = 291/620 (46%), Positives = 394/620 (63%), Gaps = 15/620 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA+ Sbjct: 7 FDVIVIGGGHAGTEAAMASARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAM 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM R D GIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMARAIDRGGIQFRILNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLTLFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS +L + Sbjct: 127 DLIVENDQVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIALSHR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +TI + Q D+ + FSF+ + + Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLTPQHGDDPMPVFSFLGNASEHPAQMPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNERTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G++ I+RPGYAIEYDY +P++L PTLE+K I LF Sbjct: 307 IYPNGISTSLPFDVQWQIVRSMDGMQNARIVRPGYAIEYDYFDPRDLKPTLESKFIHNLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQG++AG+N+AR + D R +YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGMLAGLNAARLAFDQDGWTPRRDQAYIGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R L+ +++ Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTAIGRELGMVDDERWARFNEKLENIEKERQRLRDILVH 486 Query: 485 SKN--------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIER 535 L + +S + +G+ + Y + +F+ PD + E+ Sbjct: 487 PNTEGVEQINRLLKSPLSREANGEDLLRRPEMDYAQLTALPMFAPALPDVQ-----ATEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y RQ E ++ E L+P D DY + LSNE+ KL+ KP ++ QA Sbjct: 542 VEIQVKYEGYIARQQDEIEKQLRNENTLLPADLDYRQVSGLSNEVIAKLNDHKPGSIGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G+TPAA+++LL+++KK Sbjct: 602 SRISGITPAAISILLVWLKK 621 >gi|238797882|ref|ZP_04641374.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Yersinia mollaretii ATCC 43969] gi|238718298|gb|EEQ10122.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Yersinia mollaretii ATCC 43969] Length = 629 Score = 565 bits (1457), Expect = e-159, Method: Compositional matrix adjust. Identities = 297/616 (48%), Positives = 397/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKATDLAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQPVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V + R VVLT GTFL G IHIG GR GD PS SL Sbjct: 127 DLIVENDRVVGAVTKMGLKFRAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPSISLSQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP RLD +TI + + Q D + FSF+ + + Q+ C IT Sbjct: 187 LRELPLRVNRLKTGTPPRLDARTIDFSQLVPQLGDTPIPVFSFLGNAEQHPEQMACHITY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNSHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ GLE IIRPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMKGLENARIIRPGYAIEYDFFDPRDLKPTLESKYIHGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+ R +N D R ++Y+GV++DDL++ G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAGRFANDEDGWSPRRDEAYLGVLVDDLSTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL- 483 RMFTSRAEYR+ LR DNAD RLT +G KLG + + R F+K I++ R L+ + + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEMGRKLGLVDDARWAHFSKKIEQIEKERQRLRDIWVH 486 Query: 484 -TSKNLSSTSISFKQD-GKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 S+N+S + K K E L P+ + L ++ + ++++I+ Sbjct: 487 PHSENVSEINALLKAPLSKEANGEELLRRPEIDYRLLTTLPSFGPALTDPQAADQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P D DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQEEIEKQLRNENTLLPVDLDYRQVSGLSNEVIAKLNDHKPNSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 ITPAAISILLVWLKKQ 622 >gi|261867021|ref|YP_003254943.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412353|gb|ACX81724.1| glucose-inhibited division protein A [Aggregatibacter actinomycetemcomitans D11S-1] Length = 629 Score = 565 bits (1457), Expect = e-159, Method: Compositional matrix adjust. Identities = 296/623 (47%), Positives = 391/623 (62%), Gaps = 17/623 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIGGGHAG EAA A++G T L+TH T+G +SCNPAIGG+GKGHLV+EIDA Sbjct: 6 TYDVIVIGGGHAGTEAALAPARMGLKTLLLTHNIDTLGQISCNPAIGGIGKGHLVKEIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 + GLM AD AGIQFR LN KGPAVR R Q DR LYR A++ + +Q NLD+ Q E Sbjct: 66 MGGLMATAADKAGIQFRTLNSSKGPAVRATRAQTDRVLYRQAVRIALENQPNLDIFQQEA 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E++ + +V + V+LT GTFL G IHIG GR GD S +L Sbjct: 126 TDILIEQDRATGVVTKMGLKFHAKAVILTAGTFLAGKIHIGLENYTGGRAGDPASVTLAQ 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 + RLKTGTP R+D +TI +D KQ D L FSFM + +QI C IT Sbjct: 186 RLRDLNLRVDRLKTGTPPRIDARTINFDVLAKQHGDAVLPVFSFMGSVSDHPQQIPCYIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL ++ Sbjct: 246 HTNEQTHDVIRNNLDRSPMYTGVIEGIGPRYCPSIEDKVMRFADRNSHQIYLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q + ++ GLEK I++PGYAIEYDY +P++L PTLETK ISGL Sbjct: 306 EIYPNGISTSLPFDVQMGIVNSMKGLEKARIVKPGYAIEYDYFDPRDLKPTLETKAISGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ + D R +YIGV++DDL + G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGINAGLYVQEKDAWFPRRDQAYIGVLVDDLCTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+FTSRAEYR+ LR DNAD RLTPI +LG I E R RF + ++ R L+S+ L Sbjct: 426 YRVFTSRAEYRLLLREDNADIRLTPIAHELGLIDEARWARFNQKMENIELERQRLRSIWL 485 Query: 484 ---------TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VI 533 +K L S + + + L P+ + + L S+ P + Sbjct: 486 HPRSEYLEEANKVLGSPLV------REANGEDLLRRPEMNYEILTSLTPYQPAMEDKEAV 539 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I Y Y Q E ++ K E IP FDY+ + LSNE++ KL +P ++ Sbjct: 540 EQVEIAIKYQGYIEHQEEEIEKQKRHENTAIPAQFDYAKVSGLSNEVRAKLEQHRPVSIG 599 Query: 594 QASKIEGMTPAALNLLLIYIKKN 616 QAS+I G+TPAA++++L+ +KK Sbjct: 600 QASRISGITPAAISIILVNLKKQ 622 >gi|183222816|ref|YP_001840812.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189909571|ref|YP_001961126.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|205831527|sp|B0S904|MNMG_LEPBA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|205831528|sp|B0SS01|MNMG_LEPBP RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|167774247|gb|ABZ92548.1| Glucose inhibited division protein A [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167781238|gb|ABZ99536.1| Glucose-inhibited division protein A [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 624 Score = 565 bits (1456), Expect = e-159, Method: Compositional matrix adjust. Identities = 297/617 (48%), Positives = 403/617 (65%), Gaps = 15/617 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D IV+G GHAG EAA ++AK G T LIT TIG MSCNPAIGG+ KGH+VRE+DAL Sbjct: 10 FDCIVVGAGHAGTEAAYISAKAGLKTLLITMNLDTIGQMSCNPAIGGIAKGHMVREVDAL 69 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLMGRV D GIQF++LN KGP+V PR QA+++ Y+L ++ ++ + L + Q V Sbjct: 70 GGLMGRVIDQTGIQFKMLNTSKGPSVWAPRAQAEKKQYQLMIKHQLEKLQQLSIRQDTVE 129 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E N ++ ++ + V+LTTGTFL VIHIG + +GR+G+ + L ++ Sbjct: 130 DLIVEGNQVTGVITGRGFTFYTNHVILTTGTFLSSVIHIGTYQKESGRIGEPTTKGLSHT 189 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 +F+ GRLKTGTPAR+ +I +D E Q DE PFSF T KI +QI C IT T Sbjct: 190 LARFELRLGRLKTGTPARVHKNSINFDGLEIQDGDENPRPFSFSTKKIDRKQIPCFITYT 249 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N TH +I +N+++S +YSG IKS GPRYCPSIEDK+VRF ER+ HQIF+EPEG T+ + Sbjct: 250 NDTTHELIKQNLEYSPMYSGQIKSVGPRYCPSIEDKVVRFAERDRHQIFIEPEGYETNEM 309 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG+ST+LPEE+Q +F+R+I GLE+V ++RPGYAIEYDY++P EL PTLETKK+ GL+ Sbjct: 310 YLNGVSTSLPEEVQWKFLRSIKGLEQVELMRPGYAIEYDYVDPTELHPTLETKKVKGLYH 369 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAAAQGLVA N R K + I F R++SYIGV++DDL KGV +PYR Sbjct: 370 AGQINGTTGYEEAAAQGLVAAYNVIRSVRKEEPILFKRSESYIGVLVDDLVYKGVEDPYR 429 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQK----RFAKY--IQEYNFLRSLLK 479 MFTSRAEYR+ LR DNAD RL G ++G + E K R+A+ I+ + F+ ++ Sbjct: 430 MFTSRAEYRLLLRQDNADQRLMQYGYEMGLVEESLYKDMKDRYARIESIKSHLFVSAMKP 489 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 S LT K L I+ + G + ++ FL D I++L I + + L++E Sbjct: 490 SPELT-KVLEEKQITNYKFGHSLSS--FLKRSDIKIKDLEPIVSELSILNEDEKAVLEME 546 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRL---IPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 Y Y R++ + I++ +K L IP DFDY+S+ L E KL +P NL A Sbjct: 547 VKYEGYLKREL---ETIEYRKKFLNFQIPIDFDYASVKGLKTEAIVKLEKHRPLNLENAL 603 Query: 597 KIEGMTPAALNLLLIYI 613 I G+ P+ ++LLL ++ Sbjct: 604 HISGVDPSDVDLLLYHL 620 >gi|301019838|ref|ZP_07183978.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 196-1] gi|299882052|gb|EFI90263.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 196-1] Length = 617 Score = 565 bits (1456), Expect = e-159, Method: Compositional matrix adjust. Identities = 291/611 (47%), Positives = 394/611 (64%), Gaps = 5/611 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A + E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLI 611 +TPAA+++LL+ Sbjct: 607 VTPAAISILLV 617 >gi|33151283|ref|NP_872636.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Haemophilus ducreyi 35000HP] gi|71152072|sp|Q7VPP9|MNMG_HAEDU RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|33147503|gb|AAP95025.1| glucose inhibited division protein A [Haemophilus ducreyi 35000HP] Length = 630 Score = 565 bits (1456), Expect = e-159, Method: Compositional matrix adjust. Identities = 298/619 (48%), Positives = 396/619 (63%), Gaps = 13/619 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA+ Sbjct: 7 YDVIVVGGGHAGTEAALAPARMGLKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKEIDAM 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM D AGIQFR LN KGPAVR R QADR LYR +++ + +Q+NL + Q EV Sbjct: 67 GGLMAIATDHAGIQFRTLNSSKGPAVRATRAQADRVLYRQSVRTALENQQNLAIFQQEVV 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + S +V + + TV+LT GTFL G IHIG GR GD + L Sbjct: 127 DILVENHRASGVVTKMGLTFKAKTVILTAGTFLAGKIHIGLDNYAGGRAGDPAATRLAER 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP RLD +TI ++ KQ DE L SFM + + RQI C IT Sbjct: 187 LRDLNLRVDRLKTGTPPRLDARTINFEVLAKQPGDEVLPVMSFMGEVGQHPRQIPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH II N+ S +Y+G I+ GPRYCPSIEDK++RFG+RNGHQI+LEPEGL T Sbjct: 247 TNHQTHDIIRANLDRSPMYTGIIEGIGPRYCPSIEDKVMRFGDRNGHQIYLEPEGLTTIE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LP ++Q + ++ GLE II+ GYAIEYDY +P++L PTLETK I GLF Sbjct: 307 VYPNGISTSLPFDVQMAIVNSMKGLENTRIIKAGYAIEYDYFDPRDLKPTLETKAIEGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AGIN+A + +R +Y GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGINAALQVQAKPSWFPTRDVAYTGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+FTSRAEYR+ LR DNAD RLTPI +LG I E R +RF + ++ R LK + + Sbjct: 427 RVFTSRAEYRLLLREDNADIRLTPIAHQLGLIDEARWQRFNQKMENIERERERLKQIWIH 486 Query: 485 SKN--------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 ++ L ++ ++ + +G+ ++Y + F+ D R+ + E++ Sbjct: 487 PQSAYVDAVNQLVNSPLTREVNGEDLLRRPEINYAKLTEIAAFAPALDDRQAA----EQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I Y Y Q E + K E LIP +FDY+ + +LSNE++ KL +P ++ QAS Sbjct: 543 EIAIKYQGYIEHQYNEIERHKRHENTLIPAEFDYNKVDSLSNEVRAKLMQHRPISIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKK 615 +I G+TPAA+++LL+ +KK Sbjct: 603 RISGITPAAISILLVNLKK 621 >gi|330876347|gb|EGH10496.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 630 Score = 565 bits (1456), Expect = e-159, Method: Compositional matrix adjust. Identities = 292/618 (47%), Positives = 389/618 (62%), Gaps = 13/618 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAKATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIRETLENQPNLWIFQQACD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 127 DLIVEQDQVRGVVTQMGLRILADSVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ K + Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGSKEQHPAQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 247 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R+I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVRSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCTKRESIELEEQRLKSTWVR 486 Query: 485 SKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSI----CPDARKFSSLVIERLQ 537 +IS Y L+ P+ +L ++ C D LV E+++ Sbjct: 487 PGTEQGDAISAHFGTPLTHEYNLLNLLTRPEIDYNSLIALTGQGCTD-----PLVAEQVE 541 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I++ YA Y RQ E ++ E +P+D DY+ + LS E++ KL I +P L QAS+ Sbjct: 542 IKTKYAGYIDRQQDEIARLRASEDTRLPEDIDYTGISGLSKEIQSKLGITRPETLGQASR 601 Query: 598 IEGMTPAALNLLLIYIKK 615 I G+TPAA++LL+I++KK Sbjct: 602 IPGVTPAAISLLMIHLKK 619 >gi|311696581|gb|ADP99454.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [marine bacterium HP15] Length = 628 Score = 565 bits (1456), Expect = e-159, Method: Compositional matrix adjust. Identities = 290/614 (47%), Positives = 400/614 (65%), Gaps = 5/614 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G+ T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FDVIVIGGGHAGTEAALAAARMGSQTLLLTHNIETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D AGIQFRVLN +KGPAVR R QADR LY+ A++ + SQ NL + Q Sbjct: 67 GGAMAEATDKAGIQFRVLNSRKGPAVRATRAQADRVLYKAAIRHTLESQPNLTLFQQAAD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + ++ +V Q TVVLTTGTFL GVIHIG GR GD+P+N+L Sbjct: 127 DLIVENDQVTGVVTQTGIRFNARTVVLTTGTFLGGVIHIGMQHHAGGRAGDAPANALAQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + F+ GRLKTGTP R+D +++ + ++Q+ D+ SF+ + + Q+ C +TR Sbjct: 187 LRELPFNVGRLKTGTPPRIDARSVDFSVMQEQWGDDPTPVMSFIGSRSQHPEQVCCYVTR 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T +TH II S +++G I+ GPRYCPSIEDK+ RF +++ HQIF+EPEGL T+ Sbjct: 247 TTEQTHDIIRSGFDRSPMFAGSIEGVGPRYCPSIEDKVNRFADKDSHQIFVEPEGLTTNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP +IQ +R+IPG E +I RPGYAIEYDY+NP++L TLETK I GL+ Sbjct: 307 LYPNGISTSLPFDIQLAAVRSIPGFENAHITRPGYAIEYDYLNPQDLRHTLETKFIQGLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AGIN+A +S + D R ++Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGINAALRSQEKDEWYPRRDEAYLGVLVDDLITMGTSEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL-VL 483 RMFTSRAEYR+ LR DNAD RLT G KLG + + R ++F + RS L++ + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTETGRKLGLVNDERWQKFNDKREAIATERSRLEATRIH 486 Query: 484 TSKNLSSTSISFKQDGKTR--TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 + + F + TR + E L P+ ++ I + + +V ++++IE Sbjct: 487 PNTEAGERANGFLKQPMTRDQSLAELLRRPEIVYSHIAEIGAE-KAEDPVVADQVEIEIK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y RQ E + ++ E +P D DY + LSNE+K+KL ++P + QAS+I+G+ Sbjct: 546 YEGYISRQTDEIERLRKNENTALPVDLDYDVIGGLSNEIKQKLKTVRPETVAQASRIQGV 605 Query: 602 TPAALNLLLIYIKK 615 TPAA++ +L+++KK Sbjct: 606 TPAAVSQILVHLKK 619 >gi|238795163|ref|ZP_04638752.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Yersinia intermedia ATCC 29909] gi|238725521|gb|EEQ17086.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Yersinia intermedia ATCC 29909] Length = 629 Score = 565 bits (1456), Expect = e-159, Method: Compositional matrix adjust. Identities = 295/615 (47%), Positives = 395/615 (64%), Gaps = 5/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAMATDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQPVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS SL Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLQNYSGGRAGDPPSISLSQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +TI + + Q D + FSF+ + + Q+ C IT Sbjct: 187 LRELPLRVNRLKTGTPPRIDARTIDFSQLAPQLGDTPIPVFSFLGNASQHPEQMACHITY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNSHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ GLE I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMKGLENARIVRPGYAIEYDFFDPRDLKPTLESKYIHGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+ R +N D R ++Y+GV++DDL++ G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAGRFANDDDGWSPRRDEAYLGVLVDDLSTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL- 483 RMFTSRAEYR+ LR DNAD RLT +G KLG + + R F+K I++ R L+ + + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEMGRKLGLVDDARWAHFSKKIEQIEKERQRLRDIWVH 486 Query: 484 -TSKNLSSTSISFKQD-GKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 S+N+ + K K E L P+ + L ++ + ++++I+ Sbjct: 487 PHSENVDEINALLKAPLSKEANGEELLRRPEIDYRLLTTLPSFGPALTDPQAADQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P D DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQEEIEKQLRNENTLLPTDLDYHQVSGLSNEVIAKLNDHKPNSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKK 615 +TPAA+++LL+++KK Sbjct: 607 ITPAAISILLVWLKK 621 >gi|229593492|ref|YP_002875611.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas fluorescens SBW25] gi|229365358|emb|CAY53744.1| glucose inhibited division protein A [Pseudomonas fluorescens SBW25] Length = 631 Score = 565 bits (1456), Expect = e-159, Method: Compositional matrix adjust. Identities = 290/614 (47%), Positives = 388/614 (63%), Gaps = 5/614 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G+MSCNPAIGG+GK HLV+EIDAL Sbjct: 8 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGAMSCNPAIGGIGKSHLVKEIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 68 GGVMAMATDKGGIQFRVLNSRKGPAVRATRAQADRILYKAAVRETLENQPNLWIFQQAAD 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 128 DLIVEQDQVRGVVTQMGLRFLAESVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAKR 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SFM K + +Q+ C IT Sbjct: 188 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQAGDTPIPVMSFMGSKEQHPKQVSCWITH 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 248 TNARTHEIIAANLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +++I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 308 LYPNGISTSLPFDVQIQIVQSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 368 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGKDSWCPRRDEAYIGVLVDDLITLGTQEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R + F K + LKS + Sbjct: 428 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWEAFCKKRESITLEEQRLKSTWVR 487 Query: 485 SKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +I+ K Y LS P+ L + + V E+++I++ Sbjct: 488 PGTEQGDAIAEKFGTPLTHEYNLLNLLSRPEIDYAGLVEVTGQGAE-DPQVAEQVEIKTK 546 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E ++ E +P D DY+ + LS E++ KL I +P L QAS+I G+ Sbjct: 547 YAGYIDRQQDEIARLRASEDTKLPTDIDYTGISGLSKEIQSKLGITRPQTLGQASRIPGV 606 Query: 602 TPAALNLLLIYIKK 615 TPAA++LL+I++KK Sbjct: 607 TPAAISLLMIHLKK 620 >gi|161616997|ref|YP_001590962.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|189039355|sp|A9MXB8|MNMG_SALPB RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|161366361|gb|ABX70129.1| hypothetical protein SPAB_04818 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 629 Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust. Identities = 292/616 (47%), Positives = 394/616 (63%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDSVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVSRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIHGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEMGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 S+ ++ + + + L P+ + L S+ A E+++I+ Sbjct: 487 PSAESADEVNAHLTTPLSREASGEDLLRRPEMTYAQLTSLAAFAPALEDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKKQ 622 >gi|238750333|ref|ZP_04611835.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Yersinia rohdei ATCC 43380] gi|238711566|gb|EEQ03782.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Yersinia rohdei ATCC 43380] Length = 629 Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust. Identities = 296/616 (48%), Positives = 396/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM D AGIQFR+LN KGPAVR R QADR LYRLA++ + +Q NL + Q V Sbjct: 67 GGLMAMATDKAGIQFRILNASKGPAVRATRAQADRVLYRLAVRTALENQPNLMIFQQPVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V + R VVLT GTFL G IHIG GR GD PS SL Sbjct: 127 DLIVENDKVVGAVTKMGLKFRAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPSISLSQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP RLD +TI + + Q D + FSF+ + + Q+ C IT Sbjct: 187 LRELPLRVNRLKTGTPPRLDARTIDFSQLAPQLGDTPIPVFSFLGNASQHPEQMACHITY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNSHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ GLE IIRPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMKGLENARIIRPGYAIEYDFFDPRDLKPTLESKYIHGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+ R +N D R ++Y+GV++DDL++ G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAGRFANDEDGWSPRRDEAYLGVLVDDLSTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL- 483 RMFTSRAEYR+ LR DNAD RLT +G KLG + + R F++ I++ R L+ + + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEMGRKLGLVDDARWAHFSQKIEQIEKERQRLRDIWVH 486 Query: 484 -TSKNLSSTSISFKQD-GKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 S+N+S + K K E L P+ + L ++ + ++++I+ Sbjct: 487 PHSENVSEINGLLKAPLSKEANGEELLRRPEIDYRLLTALPSFGPALTDPQAADQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E +P D DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQEEIEKQLRNENTALPADLDYRQVSGLSNEVIAKLNDHKPSSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 ITPAAISILLVWLKKQ 622 >gi|302608314|emb|CBW44763.1| glucose-inhibited division protein, oxidoreductase-like with FAD/NAD(P)-binding domain [Marinobacter hydrocarbonoclasticus] Length = 628 Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust. Identities = 291/614 (47%), Positives = 403/614 (65%), Gaps = 5/614 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G+ T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FDVIVIGGGHAGTEAALAAARMGSQTLLLTHNIETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M R D AGIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMARATDQAGIQFRVLNSRKGPAVRATRAQADRILYKAAIRHMLENQPNLTLFQQAAD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + +V Q TVVLTTGTFL GVIHIG GR GD+P+N+L Sbjct: 127 DLIVENDQVVGVVTQTGIRFNAKTVVLTTGTFLGGVIHIGMQNHAGGRAGDAPANALAKR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + F+ GRLKTGTP R+D +T+ + ++Q+ D+ SF+ + + QI C +TR Sbjct: 187 LRELPFNVGRLKTGTPPRIDARTVDFSAMQQQWGDDPTPVMSFIGSRDEHPEQICCYVTR 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETH II S +++G+I+ GPRYCPSIEDK+ RF +++ HQIF+EPEGL T+ Sbjct: 247 TTEETHDIIRSGFDRSPMFAGNIEGVGPRYCPSIEDKVNRFADKDSHQIFVEPEGLTTNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP +IQ + +R+IPG E +I+RPGYAIEYDY+NP++L TLETK I GL+ Sbjct: 307 LYPNGISTSLPFDIQLKAVRSIPGFENAHILRPGYAIEYDYLNPQDLRHTLETKFIQGLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AGIN++ ++ + R ++Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGINASLRAQDKEEWYPRRDEAYLGVLVDDLITMGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G KLG + + R ++F++ + RS L+S + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTETGRKLGLVDDERWQKFSEKCEGIAKERSRLESTRIH 486 Query: 485 SKNLSSTSIS--FKQD-GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 + + KQ + ++ E L P+ ++ I + R V ++++IE Sbjct: 487 PNTEAGERANGYLKQPMTRDQSLAELLRRPEIVYDHIAEIGAE-RAEDPNVADQVEIEIK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y RQ E + ++ E +P D DY + LSNE+K+KL ++P + QAS+I+G+ Sbjct: 546 YEGYISRQADEIERLRKNENTALPLDLDYDVIGGLSNEIKQKLKDVRPETVAQASRIQGV 605 Query: 602 TPAALNLLLIYIKK 615 TPAA++ +L+++KK Sbjct: 606 TPAAVSQILVHLKK 619 >gi|109900604|ref|YP_663859.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudoalteromonas atlantica T6c] gi|123063991|sp|Q15MT3|MNMG_PSEA6 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|109702885|gb|ABG42805.1| glucose inhibited division protein A [Pseudoalteromonas atlantica T6c] Length = 633 Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust. Identities = 297/619 (47%), Positives = 396/619 (63%), Gaps = 5/619 (0%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 + +DVIV+GGGHAG EAA AA++G+ T L+TH T+G MSCNPAIGG+GKGHLV+EI Sbjct: 4 QQQFDVIVVGGGHAGTEAALAAARMGSKTLLLTHNVETLGQMSCNPAIGGIGKGHLVKEI 63 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G M + D GIQFR LN KGPAVR R QADR LYR A++ + Q+NL + Q Sbjct: 64 DALGGSMAKAIDKGGIQFRTLNSSKGPAVRATRAQADRSLYRSAIRDIVEHQDNLTLFQQ 123 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 E + ++ +V Q R +VV+T GTFL G IHIG GR GD PS +L Sbjct: 124 SCDDLIVENDQVTGVVTQMGLKFRAKSVVITVGTFLGGTIHIGMENYKGGRAGDPPSIAL 183 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECG 241 + F RLKTGTPARLD +T+ + ++Q D FSFM + + RQI C Sbjct: 184 ADRLRALPFRVSRLKTGTPARLDARTLDYSVMQEQLGDSPTPVFSFMGKREDHPRQIACY 243 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT TN +TH II + S +Y+G I+ GPRYCPSIEDKI RF +++ HQIF+EPEGLN Sbjct: 244 ITHTNSKTHDIIRGGLDRSPMYTGVIEGIGPRYCPSIEDKINRFADKDSHQIFVEPEGLN 303 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 + VYPNGIST+LP ++Q + +R+I G E +IIRPGYAIEYD+ +P++L TLETK I Sbjct: 304 SIEVYPNGISTSLPFDVQFELVRSIKGFENAHIIRPGYAIEYDFFDPRDLKQTLETKFIK 363 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQINGTTGYEEA AQGL+AG N++ + D + R ++Y+GV+IDDL + G Sbjct: 364 GLFFAGQINGTTGYEEAGAQGLIAGANASLQCQGKDPLILRRDEAYMGVLIDDLATMGTK 423 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+ LR DNAD RLT G +LG + E R + F ++ R L+ Sbjct: 424 EPYRMFTSRAEYRLLLREDNADIRLTAKGHELGLVDEERWQAFNIKLEAIELERQRLRDT 483 Query: 482 VLTSKNLSSTSIS--FKQD-GKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQ 537 + K+ ++ +++ K K T + + P+ + + L ++ + E+++ Sbjct: 484 WVHPKHAAAEALNPLLKNALSKENTLEDLIRRPEMTYETLMNVTEFGPGITDPKAAEQVE 543 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ YA Y RQ E + + E LIP DFDYS + LSNE+ KLS KP L AS+ Sbjct: 544 IQIKYAGYIERQQDEIAKSRKNENTLIPLDFDYSQISGLSNEVVAKLSDAKPETLGLASR 603 Query: 598 IEGMTPAALNLLLIYIKKN 616 I G+TPAA++LLL+Y+KK+ Sbjct: 604 ISGITPAAISLLLVYLKKH 622 >gi|288942767|ref|YP_003445007.1| glucose inhibited division protein A [Allochromatium vinosum DSM 180] gi|288898139|gb|ADC63975.1| glucose inhibited division protein A [Allochromatium vinosum DSM 180] Length = 628 Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust. Identities = 292/618 (47%), Positives = 400/618 (64%), Gaps = 5/618 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+GGGHAG EAA AA+ G T L+T T+G MSCNPAIGG+GKGHLVREIDA Sbjct: 6 TYDVIVVGGGHAGTEAALAAARCGVRTLLLTQNIETLGQMSCNPAIGGIGKGHLVREIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLM R AD AGIQFR+LN KGPAVR R QADR+LYR A++ + +Q L + Q V Sbjct: 66 LGGLMARAADRAGIQFRILNASKGPAVRATRAQADRQLYRAAVRTALENQPGLAIFQQSV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ + Q R VVLT GTFL G IH+G GR GD PSN L Sbjct: 126 EDLLVEGERVAGVRTQMGLEFRARAVVLTVGTFLGGRIHVGLSNYEGGRAGDPPSNGLAR 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 + F RLKTGTP R+D ++I + + +Q D+ + FSF+ + RQ+ C IT Sbjct: 186 RLRELPFRIERLKTGTPPRIDARSIDYSRLAEQPGDDPVPVFSFLGRPEDHPRQVSCHIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 T+ TH II + S +++G I+ GPRYCPSIEDKIVRF +++ HQIFLEPEGL T Sbjct: 246 HTSERTHDIIRSGLSRSPLFTGVIEGVGPRYCPSIEDKIVRFADKSSHQIFLEPEGLTTH 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNGIST+LP +IQ +R+I GLE+ ++ RPGYAIEYD+++P++L P+LET+ +SGL Sbjct: 306 EVYPNGISTSLPYDIQEALVRSIVGLERAHLTRPGYAIEYDFLDPRDLKPSLETRPLSGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 FLAGQINGTTGYEEA AQGL+AG N+A + + R +SY+GVM+DDL ++G EP Sbjct: 366 FLAGQINGTTGYEEAGAQGLLAGANAALQVQGREPWHPRRDESYLGVMVDDLITRGTNEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT IG +LG +G+ + F + R L+ + Sbjct: 426 YRMFTSRAEYRLLLREDNADLRLTEIGRRLGLVGDEQWCAFEHKREAIERERQRLRDTWV 485 Query: 484 TSKNLS---STSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPD-ARKFSSLVIERLQIE 539 + L +T + + + A + L+ P+ + ++ + + + V E+L+I+ Sbjct: 486 RPETLDPTLATQVLGEPLRRESRALDLLARPNVGYAGIRALTGEPPEQVAPEVAEQLEIQ 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + YA Y RQ E + + +E + +P FDY+ + LS E++EKL ++P + QA++I Sbjct: 546 TRYAGYIDRQRAEIERQREQELKPLPDSFDYAQVRGLSVEVREKLMRVRPATIGQAARIP 605 Query: 600 GMTPAALNLLLIYIKKNT 617 G+TPAA++LLLI++K+ Sbjct: 606 GVTPAAVSLLLIHLKRQA 623 >gi|120556790|ref|YP_961141.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Marinobacter aquaeolei VT8] gi|166222941|sp|A1U7I5|MNMG_MARAV RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|120326639|gb|ABM20954.1| glucose inhibited division protein A [Marinobacter aquaeolei VT8] Length = 628 Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust. Identities = 291/614 (47%), Positives = 403/614 (65%), Gaps = 5/614 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G+ T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FDVIVIGGGHAGTEAALAAARMGSQTLLLTHNIETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M R D AGIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMARATDQAGIQFRVLNSRKGPAVRATRAQADRILYKAAIRHMLENQPNLTLFQQAAD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + +V Q TVVLTTGTFL GVIHIG GR GD+P+N+L Sbjct: 127 DLIVENDQVVGVVTQTGIRFNAKTVVLTTGTFLGGVIHIGMQNHAGGRAGDAPANALAKR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + F+ GRLKTGTP R+D +T+ + ++Q+ D+ SF+ + + QI C +TR Sbjct: 187 LRELPFNVGRLKTGTPPRIDARTVDFSAMQQQWGDDPTPVMSFIGSRDEHPEQICCYVTR 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETH II S +++G+I+ GPRYCPSIEDK+ RF +++ HQIF+EPEGL T+ Sbjct: 247 TTEETHDIIRSGFDRSPMFAGNIEGVGPRYCPSIEDKVNRFADKDSHQIFVEPEGLTTNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP +IQ + +R+IPG E +I+RPGYAIEYDY+NP++L TLETK I GL+ Sbjct: 307 LYPNGISTSLPFDIQLKAVRSIPGFENAHILRPGYAIEYDYLNPQDLRHTLETKFIQGLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AGIN++ ++ + R ++Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGINASLRARDQEEWYPRRDEAYLGVLVDDLITMGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G KLG + + R ++F++ + RS L+S + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTETGRKLGLVDDERWQKFSEKCEGIAKERSRLESTRIH 486 Query: 485 SKNLSSTSIS--FKQD-GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 + + KQ + ++ E L P+ ++ I + R V ++++IE Sbjct: 487 PNTEAGERANGYLKQPMTRDQSLAELLRRPEIVYDHIAEIGAE-RAEDPNVADQVEIEIK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y RQ E + ++ E +P D DY + LSNE+K+KL ++P + QAS+I+G+ Sbjct: 546 YEGYISRQADEIERLRKNENTALPLDLDYDVIGGLSNEIKQKLKDVRPETVAQASRIQGV 605 Query: 602 TPAALNLLLIYIKK 615 TPAA++ +L+++KK Sbjct: 606 TPAAVSQILVHLKK 619 >gi|168239645|ref|ZP_02664703.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194737365|ref|YP_002116817.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|238690703|sp|B4TN42|MNMG_SALSV RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|194712867|gb|ACF92088.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197287686|gb|EDY27077.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 629 Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust. Identities = 292/616 (47%), Positives = 394/616 (63%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVSRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIHGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEMGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 S+ ++ + + + L P+ + L S+ A E+++I+ Sbjct: 487 PSAESADEVNTHLTTPLSREASGEDLLRRPEMTYAQLTSLAAFAPALEDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKKQ 622 >gi|198242041|ref|YP_002217822.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205354543|ref|YP_002228344.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207859097|ref|YP_002245748.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|238690338|sp|B5FN44|MNMG_SALDC RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|238690396|sp|B5QVE1|MNMG_SALEP RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|238690535|sp|B5RFV4|MNMG_SALG2 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|197936557|gb|ACH73890.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205274324|emb|CAR39348.1| glucose inhibited division protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206710900|emb|CAR35264.1| glucose inhibited division protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326625609|gb|EGE31954.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326629678|gb|EGE36021.1| glucose-inhibited division protein A [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 629 Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust. Identities = 292/616 (47%), Positives = 394/616 (63%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVSRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIHGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEMGRELGLVDDERWARFNEKLESIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 S+ ++ + + + L P+ + L S+ A E+++I+ Sbjct: 487 PSAESADEVNAHLTTPLSREASGEDLLRRPEMTYAQLTSLAAFAPALEDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKKQ 622 >gi|16767158|ref|NP_462773.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167994881|ref|ZP_02575971.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168234385|ref|ZP_02659443.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168245184|ref|ZP_02670116.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168263227|ref|ZP_02685200.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168464788|ref|ZP_02698680.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168823141|ref|ZP_02835141.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194445542|ref|YP_002043122.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194450875|ref|YP_002047905.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194470389|ref|ZP_03076373.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197250701|ref|YP_002148811.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197265255|ref|ZP_03165329.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|200388594|ref|ZP_03215206.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204928647|ref|ZP_03219846.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|238913127|ref|ZP_04656964.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|21263669|sp|Q8ZKW6|MNMG_SALTY RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|238690004|sp|B5EZ07|MNMG_SALA4 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|238690240|sp|B4TAY3|MNMG_SALHS RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|238693556|sp|B4SYE2|MNMG_SALNS RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|16422448|gb|AAL22732.1| associated with glucose-inhibited division [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|194404205|gb|ACF64427.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194409179|gb|ACF69398.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194456753|gb|EDX45592.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|195632101|gb|EDX50585.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197214404|gb|ACH51801.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197243510|gb|EDY26130.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|199605692|gb|EDZ04237.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204322080|gb|EDZ07278.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205327320|gb|EDZ14084.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205331678|gb|EDZ18442.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205336051|gb|EDZ22815.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205340555|gb|EDZ27319.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205348292|gb|EDZ34923.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|261249013|emb|CBG26871.1| glucose inhibited division protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267996162|gb|ACY91047.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301160406|emb|CBW19932.1| glucose inhibited division protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312915005|dbj|BAJ38979.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320088299|emb|CBY98060.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG Glucose-inhibited division protein A [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321222172|gb|EFX47245.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322617213|gb|EFY14118.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619099|gb|EFY15985.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625166|gb|EFY21994.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322630217|gb|EFY26988.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634358|gb|EFY31092.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635242|gb|EFY31957.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642881|gb|EFY39466.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645085|gb|EFY41615.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650434|gb|EFY46846.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653626|gb|EFY49953.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322661546|gb|EFY57769.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322661628|gb|EFY57847.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669790|gb|EFY65932.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671983|gb|EFY68102.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675006|gb|EFY71092.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683696|gb|EFY79709.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686083|gb|EFY82068.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323132236|gb|ADX19666.1| glucose-inhibited division protein A [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323192000|gb|EFZ77237.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323200494|gb|EFZ85572.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202723|gb|EFZ87760.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208300|gb|EFZ93241.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211735|gb|EFZ96568.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323218597|gb|EGA03304.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323219998|gb|EGA04468.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323224769|gb|EGA09034.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323232523|gb|EGA16625.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235298|gb|EGA19383.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323241086|gb|EGA25123.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323241365|gb|EGA25397.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248595|gb|EGA32525.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252106|gb|EGA35966.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258590|gb|EGA42253.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262378|gb|EGA45936.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323268215|gb|EGA51691.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270629|gb|EGA54074.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|332990723|gb|AEF09706.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 629 Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust. Identities = 292/616 (47%), Positives = 394/616 (63%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVSRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIHGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEMGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 S+ ++ + + + L P+ + L S+ A E+++I+ Sbjct: 487 PSAESADEVNAHLTTPLSREASGEDLLRRPEMTYAQLTSLAAFAPALEDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKKQ 622 >gi|28872709|ref|NP_795328.1| glucose-inhibited division protein A [Pseudomonas syringae pv. tomato str. DC3000] gi|38257457|sp|Q87TS3|MNMG_PSESM RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|28855965|gb|AAO59023.1| glucose-inhibited division protein A [Pseudomonas syringae pv. tomato str. DC3000] Length = 630 Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust. Identities = 292/618 (47%), Positives = 389/618 (62%), Gaps = 13/618 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIREILENQPNLWIFQQACD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 127 DLIVEQDQVRGVVTQMGLRILADSVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+DG+++ + +Q D ++ SF+ K + Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPILVMSFLGSKEQHPAQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 247 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R+I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVRSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCTKRESIELEEQRLKSTWVR 486 Query: 485 SKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSI----CPDARKFSSLVIERLQ 537 +IS Y L+ P+ +L ++ C D LV E+++ Sbjct: 487 PGTQQGDAISAHFGTPLTHEYNLLNLLTRPEIDYNSLIALTGQGCAD-----PLVAEQVE 541 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I++ YA Y RQ E ++ E +P+D DY+ + LS E++ KL I +P L QAS+ Sbjct: 542 IKTKYAGYIDRQQEEIARLRASEDTRLPEDIDYTGISGLSKEIQSKLGITRPETLGQASR 601 Query: 598 IEGMTPAALNLLLIYIKK 615 I G+TPAA++LL+I++KK Sbjct: 602 IPGVTPAAISLLMIHLKK 619 >gi|156936121|ref|YP_001440037.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cronobacter sakazakii ATCC BAA-894] gi|205831508|sp|A7MMW3|MNMG_ENTS8 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|156534375|gb|ABU79201.1| hypothetical protein ESA_04015 [Cronobacter sakazakii ATCC BAA-894] Length = 629 Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust. Identities = 289/616 (46%), Positives = 394/616 (63%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYKQAVRTALENQPNLMIFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSVPLARR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +TI + ++Q D + FSFM + RQ+ C +T Sbjct: 187 LRELPLRVSRLKTGTPPRIDARTIDFSVLDQQHGDNPMPVFSFMGSADQHPRQVPCYVTH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMKGMENAKIVRPGYAIEYDFFDPRDLKPTLESKYIHGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+ R S + + R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAGRYSAEKEGWAPGRSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT +G ++G + + R RF + ++ R L+S +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEVGREMGLVDDARWARFNEKLENIERERQRLRSTWVT 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 S I+ + + + L P+ + L S+ A + E+++I+ Sbjct: 487 PSTASVEEINTMLTAPLSREASGEDLLRRPEMTYAQLTSLSAFAPALDDAQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ + E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQQRNENTLLPATLDYRQVNGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 ITPAAISILLVWLKKQ 622 >gi|58584868|ref|YP_198441.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|75497718|sp|Q5GS25|MNMG_WOLTR RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|58419184|gb|AAW71199.1| NAD/FAD-utilizing enzyme apparently involved in cell division, GidA [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 677 Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust. Identities = 301/647 (46%), Positives = 391/647 (60%), Gaps = 58/647 (8%) Query: 30 STALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGP 89 ST LITHK STIG MSCNPAIGG+ KG +VRE+DALDG+MGR D A I +LN +G Sbjct: 28 STLLITHKISTIGEMSCNPAIGGVAKGIVVREVDALDGIMGRAIDQASIHSVILNSSRGA 87 Query: 90 AVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKN-----IISSIVMQDNSM 144 AV GPR QADR+LY+ A+Q IL+ +NL V + V F E N I +I+ Sbjct: 88 AVWGPRAQADRKLYKKAIQEIILNHDNLTVKEESVDDFLIESNSNGEPYIKAIITSSGKQ 147 Query: 145 IRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARL 204 I S VVLTTGTFL+G++HIG+ P+GRMGD + L N+ K+DF GRL+TGTP RL Sbjct: 148 ILTSKVVLTTGTFLQGMVHIGEQTTPSGRMGDKSAVELANTLKKYDFKLGRLRTGTPPRL 207 Query: 205 DGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAI-Y 263 D TI W E+Q + +PFS++T+KI Q+ C IT TN THRII N+ SA Y Sbjct: 208 DRSTINWSILEEQVGNNPPMPFSYLTEKINQPQVSCFITYTNENTHRIIQANLHRSASSY 267 Query: 264 SGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFI 323 DI PRYCPSIE K+ +F E+N HQIFLEPEGL+ VYPNGIS +LP E+Q + I Sbjct: 268 LNDI--VAPRYCPSIEAKVKKFAEKNSHQIFLEPEGLDNITVYPNGISNSLPIEVQREMI 325 Query: 324 RTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGL 383 +I GLE I+RPGYA+EYDYI+P+ELF TLETKK+ GL+ AGQINGTTGYEEAA QG+ Sbjct: 326 NSIKGLENAEILRPGYAVEYDYIDPRELFHTLETKKVKGLYFAGQINGTTGYEEAAGQGI 385 Query: 384 VAGINSA-RKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNA 442 +AGIN+A S K + RTDSYIGVMIDDL +KGV EPYR+FTSRAEYR+++R DNA Sbjct: 386 IAGINAALSASQKKESFVLHRTDSYIGVMIDDLVTKGVTEPYRLFTSRAEYRLAIRSDNA 445 Query: 443 DNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTR 502 D RLT G + + +R ++ L L+SL +T + L I DG + Sbjct: 446 DRRLTQKGYNISLVSYKRYSALQNKLKSIKQLEEKLESLKITPEQLRFCGIKISHDGIRK 505 Query: 503 TAYEFLSYPDFSIQNLFSICP--------------------------------------- 523 TA + LSYP+ L I P Sbjct: 506 TALDLLSYPNIDWNKLQEIWPELTNVTRWNDNKADQTVIQVVDTRIQKKNADSSVTRWND 565 Query: 524 ------DARKFSSL----VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSL 573 D++ S+ + E + IE+ Y Y RQ + K ++ E IP +F+YS + Sbjct: 566 KTGYWNDSKTTSNTIKNEICEAVAIEAKYKPYLVRQEADMKFLREEMNTQIPTNFNYSQI 625 Query: 574 PALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVKL 620 LS+E+ EKL +KP + A +I+G+TPAA+ +L+Y++ K+ Sbjct: 626 KGLSSEVIEKLQAIKPATIGIAKQIQGITPAAIVSILVYLRNRKTKV 672 >gi|300719171|ref|YP_003743974.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme, glucose-inhibited division protein A [Erwinia billingiae Eb661] gi|299065007|emb|CAX62127.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme, Glucose-inhibited division protein A [Erwinia billingiae Eb661] Length = 629 Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust. Identities = 295/616 (47%), Positives = 391/616 (63%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIVIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAHAIDRAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R +VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKSVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLARR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +TI + + Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVSRLKTGTPPRIDARTIDFSVLDPQHGDTPMPVFSFMGNVSQHPQQVPCYITY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH +I N+ S +YSG I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNENTHEVIRNNLDRSPMYSGVIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ GLE I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQIQIVRSMKGLENAKIVRPGYAIEYDFFDPRDLKPTLESKHIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+ R S + R +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAGRLSADKETWAPRRDQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R RF + ++ R L+ + + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEAGRELGLVDDARWARFNEKLESIEKERQRLRDIWVH 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 K+ S ++ K + + L P+ + Q L ++ A + E+++I+ Sbjct: 487 PKSDSVEEVNGVLSAALTKEASGEDLLRRPEMTYQQLMTLSTFAPALADPQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E + E L+P + DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQEEINRQQRNENTLLPAELDYHQVSGLSNEVIAKLNDHKPGSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LLIY+KK Sbjct: 607 ITPAAISILLIYLKKQ 622 >gi|192359013|ref|YP_001984271.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Cellvibrio japonicus Ueda107] gi|238692448|sp|B3PIT8|MNMG_CELJU RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|190685178|gb|ACE82856.1| glucose-inhibited division protein A [Cellvibrio japonicus Ueda107] Length = 638 Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust. Identities = 288/614 (46%), Positives = 396/614 (64%), Gaps = 5/614 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EA AA++G T L++H T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FDVIVIGGGHAGTEACLAAARMGCKTLLLSHNIETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 67 GGAMALATDKGGIQFRVLNARKGPAVRATRAQADRILYKAAIRHTLENQPNLWIFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q VVLT GTFL G+IHIG GR GD PS +L Sbjct: 127 DLIVEQDQVRGVVTQMGLKFMADQVVLTAGTFLGGLIHIGLENYSGGRAGDPPSIALSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK-ITNRQIECGITR 244 + RLKTGTP R+D +T+ +D EKQ+ DE S ++ + QI C IT Sbjct: 187 LRELPLRVDRLKTGTPPRIDARTVNFDLLEKQWGDEPRPVMSVRGNRAMQPPQICCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH +I N+ S +YSG I+ GPRYCPSIEDKI RF +++ HQ+F+EPEGL T Sbjct: 247 TNERTHEVIRNNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKDSHQVFIEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ NP++L +LET+ I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVRSMRGFENAHILRPGYAIEYDFFNPQDLQHSLETRVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AGIN+A ++ C +R +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGINAALRAQGKAAWCPTRDQAYMGVLVDDLITLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG IG+ + + F + ++ + LKS + Sbjct: 427 RMFTSRAEYRLLLREDNADLRLTEKGRELGLIGDEQWQLFCEKREQIALEQQRLKSTWIQ 486 Query: 485 SKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 + + + I K + + Y + L P+ + ++ S+ + + E+++IE+ Sbjct: 487 AGSAEAEQIEAKINVRLAREYSLMDLLKRPELNYADVASLKGEPLAGEA-AAEQVEIEAK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ + ++ E LIP+D DY+ + LSNE+K+KLS +P L +A++I G+ Sbjct: 546 YAGYIDRQQDDINRLRAYENTLIPEDLDYAQVEGLSNEVKQKLSAARPQTLARAARISGI 605 Query: 602 TPAALNLLLIYIKK 615 TPAA++L+L+Y+KK Sbjct: 606 TPAAISLVLVYLKK 619 >gi|146328969|ref|YP_001209581.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Dichelobacter nodosus VCS1703A] gi|166222931|sp|A5EV65|MNMG_DICNV RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|146232439|gb|ABQ13417.1| glucose inhibited division protein A [Dichelobacter nodosus VCS1703A] Length = 632 Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust. Identities = 300/622 (48%), Positives = 399/622 (64%), Gaps = 15/622 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA++G T L+T TIG MSCNP+IGG+GKGHLV+EIDAL Sbjct: 7 FDVIVVGGGHAGVEAACAAARMGCDTLLLTQNIETIGQMSCNPSIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DG+M R D AGI +R+LN +KG AV+ R QADR LY+ A++ + QE+L V Q EV+ Sbjct: 67 DGVMARATDRAGIHWRILNRRKGAAVQATRAQADRVLYKAAVRALVEKQEHLRVFQTEVS 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 G + + Q TV++T GTFL G I++G GR GD + L N Sbjct: 127 GILLNGETVIGVSSQHKIDFHAKTVIITAGTFLGGKIYVGLNYFVGGRAGDPAALELANK 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 F+T R+KTGTP R+D ++I + + +Q DE L FS++ + + RQI C IT Sbjct: 187 LRDLPFETHRMKTGTPPRIDARSIDFSQMSEQLGDEPLPVFSYLGNVNEHPRQIPCHITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIK-SYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH II E I + +Y+G IK ++GPRYCPSIEDK++RF ++ HQIFLEPE L T+ Sbjct: 247 TNTQTHDIIREYIDQAPMYAGVIKDAFGPRYCPSIEDKVMRFHDKTSHQIFLEPESLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP E Q +++ TI GLE+ I RPGYAIEYD+ NP+ L TLETK I L Sbjct: 307 EIYPNGISTSLPFEAQLKYVHTIKGLEQAIITRPGYAIEYDFFNPQGLRYTLETKAIKNL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+A + + R +Y+GV+IDDL ++G EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGINAALRVYDKEGWYPRRDQAYLGVLIDDLITQGTREP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R+ LR DNAD RLT IG +LGC+G R K+F + LK L++ Sbjct: 427 YRMFTSRAEHRLLLREDNADQRLTAIGYQLGCVGSARMKQFDAKMTAVAHASDQLKKLLI 486 Query: 484 TSKNLSSTSISFKQDGKTRTAY--EFLSYPDFSIQNLFSIC--PDARKFSSLVIERLQIE 539 + LS G T Y E L P+ ++ + ++ P S VIE++ I Sbjct: 487 PADRLS---------GLTHNTYAAELLKRPEIDVRAVLALANVPPDEYPSDEVIEQIDIA 537 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + Y+ Y RQ E +++ + +P FDY + LS EL EKL ++P +L QA++I Sbjct: 538 AKYSGYIQRQYEEVAKLQKNRAQKLPVPFDYRKVTGLSAELAEKLQKVQPHDLDQAARIA 597 Query: 600 GMTPAALNLLLIYIKKNTVKLN 621 GMTPAAL+LLLIY KK+T L+ Sbjct: 598 GMTPAALSLLLIYFKKHTQPLS 619 >gi|56415742|ref|YP_152817.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197364670|ref|YP_002144307.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|81170575|sp|Q5PJX1|MNMG_SALPA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|238690766|sp|B5BIP5|MNMG_SALPK RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|56129999|gb|AAV79505.1| glucose inhibited division protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197096147|emb|CAR61743.1| glucose inhibited division protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 629 Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust. Identities = 292/616 (47%), Positives = 394/616 (63%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVSRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIHGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKERWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEMGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 S+ ++ + + + L P+ + L S+ A E+++I+ Sbjct: 487 PSAESADEVNAHLTTPLSREASGEDLLRRPEMTYAQLTSLAAFAPALEDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKKQ 622 >gi|83649685|ref|YP_438120.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Hahella chejuensis KCTC 2396] gi|123529920|sp|Q2S6M9|MNMG_HAHCH RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|83637728|gb|ABC33695.1| glucose-inhibited division protein A [Hahella chejuensis KCTC 2396] Length = 629 Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust. Identities = 295/617 (47%), Positives = 402/617 (65%), Gaps = 6/617 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 +S+DVIVIGGGHAG EAA AA++G+ T L+TH T+G MSCNPAIGG+GK HLV+E+D Sbjct: 5 KSFDVIVIGGGHAGTEAALAAARMGSQTLLLTHNIETLGQMSCNPAIGGIGKSHLVKEVD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREIL-SQENLDVIQG 122 AL G M D AGIQFRVLN +KGPAVR R QADR LY+ A+ REIL +Q NL + Q Sbjct: 65 ALGGAMALATDRAGIQFRVLNSRKGPAVRATRAQADRALYKAAI-REILENQPNLTIFQQ 123 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 + + ++ +V Q TVVLTTGTFL GVIHIG GR GD PS +L Sbjct: 124 AADDLIMQGDHVAGVVTQMGLRFHSKTVVLTTGTFLGGVIHIGLENHSGGRAGDPPSIAL 183 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQIECG 241 + F GRLKTGTP R+D +++ + E Q D + SFM + + Q+ C Sbjct: 184 AKRLREMPFRVGRLKTGTPPRIDARSVDFSVMEAQPGDTPIPVMSFMGSVDLHPHQVNCF 243 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 ITRTN TH II + S +Y+G I+ GPRYCPSIEDK+ RF +++ HQ+F+EPEGL+ Sbjct: 244 ITRTNERTHEIIRGGMDRSPMYTGVIEGVGPRYCPSIEDKVNRFSDKDSHQVFIEPEGLS 303 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T +YPNGIST+LP ++Q Q + +I G+E +I RPGYAIEYD+ NP++L +LETK + Sbjct: 304 THELYPNGISTSLPFDVQLQLVHSIQGMENAHITRPGYAIEYDFFNPQDLKHSLETKFVG 363 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 LF AGQINGTTGYEEAAAQGL+AG+N+A ++ + + R ++YIGV++DDL + G Sbjct: 364 SLFFAGQINGTTGYEEAAAQGLLAGMNAALRAQEKEAWSPRRDEAYIGVLVDDLITMGTR 423 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+ LR DNAD RLT G +LG I + R + F + + + LKS+ Sbjct: 424 EPYRMFTSRAEYRLLLREDNADLRLTEKGRELGMIDDERWRVFCEKREAIAREQQRLKSI 483 Query: 482 VL---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 + T K + + + + + ++ L P+ + + L + D V E+L+I Sbjct: 484 WIQPATEKARKAAELLETELTREYSLHDLLKRPEMTWEKLSLLDADVAATPYEVAEQLEI 543 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + YA Y RQ E + ++ E +P D DYS + LSNE+K+KL+ ++P L QAS+I Sbjct: 544 QVKYAGYIDRQQEEIERLRRNENMALPADLDYSGIQGLSNEIKQKLTEVRPETLAQASRI 603 Query: 599 EGMTPAALNLLLIYIKK 615 G+TPAA++LLL+++KK Sbjct: 604 PGVTPAAVSLLLVHLKK 620 >gi|260753423|ref|YP_003226316.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258552786|gb|ACV75732.1| glucose inhibited division protein A [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 621 Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust. Identities = 291/614 (47%), Positives = 406/614 (66%), Gaps = 4/614 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D++VIGGGHAGCEAAAVAA++GA TAL+T + IG+MSCNPAIGGLGKGHLVREIDA Sbjct: 11 FDIVVIGGGHAGCEAAAVAARMGAKTALVTMDSEQIGAMSCNPAIGGLGKGHLVREIDAW 70 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGLM AD A I +R+LN KG AV+GPR QADR Y+ A+QR + Q +L +I+G Sbjct: 71 DGLMPHAADYAAIHYRMLNRSKGSAVQGPRIQADRNRYKKAIQRALKEQAHLTIIEGMAE 130 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 F +K + ++++ D ++ +VVLTTGTFL + G+ K GR+G+ PS L Sbjct: 131 SFQMDKGKVKAVLLADGRSLKTESVVLTTGTFLDAWLFCGEKKWRGGRIGEQPSIGLAEQ 190 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPF-SFMTDKITNRQIECGITR 244 D GRLKTGTPARLDG+TI W + ++Q +DE S+ T ++ QI C +TR Sbjct: 191 LKALDLPLGRLKTGTPARLDGRTIDWARLQRQPSDEDAWTMASYGTGRVAP-QIACSLTR 249 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 +N +TH II + S ++SG I+ GPRYCPSIEDKI++FG+R+GHQIFLEPEGL+T + Sbjct: 250 SNQKTHDIIRAGLDRSPLFSGAIEGRGPRYCPSIEDKIMKFGDRDGHQIFLEPEGLDTPL 309 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LPE++Q FI +I GLE I++ GYA+EY++I+P+ L LE K + G+F Sbjct: 310 IYPNGISTSLPEDVQQAFINSIEGLENTKIVQFGYAVEYEFIDPRSLTHQLELKAMKGVF 369 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGLVAGI++A F R +SYIGVMIDDL +GV EPY Sbjct: 370 CAGQINGTTGYEEAAAQGLVAGISAACAVAGKTSPVFDRRNSYIGVMIDDLVLQGVTEPY 429 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM T+RAEYR+ LR DNA RL+ G +G K + E + LL+ + Sbjct: 430 RMLTARAEYRLGLRADNAVTRLSGQAKAFGALGAEMTAFVTKRLAEREKCQKLLEK-AAS 488 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 S+++ + + + G + + +E+L +P + Q+L ++ P+ +FS V+ + + YA Sbjct: 489 SRDMQAVGANVTE-GASHSLFEWLRFPAVTRQHLEALIPELTEFSDAVVSEIIDDGRYAP 547 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ E + + +P + DY+++ LSNE+ E+ S +P ++ AS++ G+TPA Sbjct: 548 YLERQDAELARLAGHDNMPLPAELDYAAIAGLSNEMVERFSAARPPDMASASRVRGVTPA 607 Query: 605 ALNLLLIYIKKNTV 618 AL +LI+ KK T+ Sbjct: 608 ALAAILIHAKKVTL 621 >gi|312174362|emb|CBX82615.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Erwinia amylovora ATCC BAA-2158] Length = 629 Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust. Identities = 296/616 (48%), Positives = 389/616 (63%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIVIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLMG D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMGHAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLLVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGMDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +T+ + Q D L FSFM D + RQ+ C IT Sbjct: 187 LRELPLRFGRLKTGTPPRIDARTVDFSVLAPQHGDTPLPVFSFMGDVSQHPRQVPCYITY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH++I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHQVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMHGMENAKIVRPGYAIEYDFFDPRDLKPTLESKYIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+ R S + R +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAGRLSADKESWAPRRDQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R RF + ++ R L+ + + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEAGRELGLVDDARWARFNEKLESIEQERQRLRDIWVH 486 Query: 485 SKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICP-DARKFSSLVIERLQIES 540 K+ S+ K + + L P+ + Q L ++ + E+++I+ Sbjct: 487 PKSECVAQVNSVISAALTKEASGEDLLRRPEMTYQQLMTLKHFAPALADAQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E E ++P D DY + LSNE KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQEEIDRQLRNENTVLPVDLDYQQVSGLSNEAIAKLNDHKPGSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LLIY+KK Sbjct: 607 ITPAAISILLIYLKKQ 622 >gi|332308610|ref|YP_004436461.1| glucose inhibited division protein A [Glaciecola agarilytica 4H-3-7+YE-5] gi|332175939|gb|AEE25193.1| glucose inhibited division protein A [Glaciecola agarilytica 4H-3-7+YE-5] Length = 633 Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust. Identities = 297/619 (47%), Positives = 395/619 (63%), Gaps = 5/619 (0%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 + +DVIV+GGGHAG EAA AA++G++T L+TH T+G MSCNPAIGG+GKGHLV+EI Sbjct: 4 QQQFDVIVVGGGHAGTEAALAAARMGSNTLLLTHNIETLGQMSCNPAIGGIGKGHLVKEI 63 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G M D AGIQFR LN KGPAVR R QADR LYR A++ + Q+NL + Q Sbjct: 64 DALGGSMATAIDKAGIQFRTLNSSKGPAVRATRAQADRSLYRSAIRDIVEHQDNLTIFQQ 123 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 E + ++ +V Q +VV+T GTFL G IHIG GR GD PS +L Sbjct: 124 SCDDLIVENDQVTGVVTQMGLKFHARSVVITVGTFLGGTIHIGMENYKGGRAGDPPSIAL 183 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECG 241 + F RLKTGTPARLD +T+ + ++Q D FSFM + + RQI C Sbjct: 184 ADRLRALPFRVSRLKTGTPARLDARTLDYSVMQEQLGDSPTPVFSFMGKREDHPRQIACY 243 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT TN +TH II + S +Y+G I+ GPRYCPSIEDKI RF +++ HQIF+EPEGLN Sbjct: 244 ITHTNSKTHDIIRGGLDRSPMYTGVIEGIGPRYCPSIEDKINRFADKDSHQIFVEPEGLN 303 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 + VYPNGIST+LP ++Q + +R+I G E +IIRPGYAIEYD+ +P++L TLETK I Sbjct: 304 SIEVYPNGISTSLPFDVQFELVRSIKGFENAHIIRPGYAIEYDFFDPRDLKQTLETKFIK 363 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQINGTTGYEEA AQGLVAG N++ + D + R ++Y+GV+IDDL + G Sbjct: 364 GLFFAGQINGTTGYEEAGAQGLVAGANASLQCQGKDPLILRRDEAYMGVLIDDLATMGTK 423 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+ LR DNAD RLT G +LG + E R + F + ++ R L+ Sbjct: 424 EPYRMFTSRAEYRLLLREDNADIRLTTKGHELGLVDEERWQAFNRKLEAIELERQRLRDT 483 Query: 482 VLTSKNLSSTSIS--FKQD-GKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQ 537 + K+ ++ ++ K K T + + P+ + + L + + E+++ Sbjct: 484 WVHPKHAAADVLNPLLKNALSKENTLEDLIRRPEMTYETLMKVTDFGPGIADPKAAEQVE 543 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ YA Y RQ E + + E LIP DFDYS + LSNE+ KL+ KP L AS+ Sbjct: 544 IQIKYAGYIERQQEEIAKSRKNENTLIPVDFDYSQISGLSNEVVAKLTDAKPETLGLASR 603 Query: 598 IEGMTPAALNLLLIYIKKN 616 I G+TPAA++LLL+Y+KK+ Sbjct: 604 ISGITPAAISLLLVYLKKH 622 >gi|261341602|ref|ZP_05969460.1| hypothetical protein ENTCAN_08064 [Enterobacter cancerogenus ATCC 35316] gi|288315953|gb|EFC54891.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterobacter cancerogenus ATCC 35316] Length = 629 Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust. Identities = 288/616 (46%), Positives = 398/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVSRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNAAQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + + R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARFSAEKEGWAPGRSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R LK+ + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEMGRELGLVDDERWARFNEKLERIERERQRLKTTWVN 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VIERLQIES 540 + ++ ++ + + + L P+ + ++L ++ A E+++I+ Sbjct: 487 PQAETAAEVNTHLTAPLSREASGEDLLRRPEMTYESLVNLTAFAPGLDDAEAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ + E L+P+ DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQQRNENTLLPEMLDYRQVTGLSNEVIAKLNDHKPVSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKKQ 622 >gi|302185834|ref|ZP_07262507.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. syringae 642] Length = 630 Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust. Identities = 292/618 (47%), Positives = 390/618 (63%), Gaps = 13/618 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIRETLENQPNLWIFQQACD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 127 DLIVEQDQVRGVVTQMGMRIFADSVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ +K + Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGNKEQHPPQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 247 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R+I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVRSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCTKRESIELEEQRLKSTWVR 486 Query: 485 SKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSI----CPDARKFSSLVIERLQ 537 +I+ Y L+ P+ +L SI C D + V E+++ Sbjct: 487 PGTEQGDAIAAHFGTPLTHEYNLLNLLTRPEIDYASLISITGQGCTDPQ-----VAEQVE 541 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I++ YA Y RQ E ++ E +P+D DY+++ LS E++ KL I +P L QAS+ Sbjct: 542 IKTKYAGYIDRQQDEIARLRASEDTRLPEDIDYAAISGLSKEIQSKLGITRPETLGQASR 601 Query: 598 IEGMTPAALNLLLIYIKK 615 I G+TPAA++LL+I++KK Sbjct: 602 IPGVTPAAISLLMIHLKK 619 >gi|90415383|ref|ZP_01223317.1| Glucose-inhibited division protein A subfamily protein [marine gamma proteobacterium HTCC2207] gi|90332706|gb|EAS47876.1| Glucose-inhibited division protein A subfamily protein [marine gamma proteobacterium HTCC2207] Length = 622 Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust. Identities = 288/616 (46%), Positives = 396/616 (64%), Gaps = 5/616 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 S+DVIV+GGGHAG EA AA++G+ T L+TH T+G MSCNPAIGG+GK HLV+EIDA Sbjct: 6 SFDVIVVGGGHAGTEACLAAARMGSKTLLLTHNIETLGQMSCNPAIGGIGKTHLVKEIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M + D GIQFRVLN +KGPAVR R QADR LY+ A+ + +Q+NL + Q V Sbjct: 66 LGGAMAKATDLGGIQFRVLNSRKGPAVRATRAQADRVLYKAAILEILQNQQNLTLFQQAV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ +V Q + TVV+T GTFL G IHIG AGR GD P+ +L Sbjct: 126 DDLILEGDSVTGVVTQMGLTFKAKTVVVTAGTFLAGKIHIGMENYSAGRAGDPPALNLSQ 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 F RLKTGTP R+D +++ + + +Q+ D+ S++ + +Q C IT Sbjct: 186 RLRSLPFRVERLKTGTPPRIDARSVDFSQLPEQWGDQPEPVMSYLGSVTQHPKQTCCWIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH II + S +Y+G I GPRYCPSIEDK+VRF ++N HQIF+EPEGLNT Sbjct: 246 YTNSQTHDIIKGGMDRSPLYTGVIDGVGPRYCPSIEDKVVRFADKNQHQIFIEPEGLNTY 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q +R+I G E +I RPGYAIEYDY NP++L +LETK + GL Sbjct: 306 ELYPNGISTSLPFDVQLSLVRSIVGFENAHITRPGYAIEYDYFNPQDLKYSLETKSVKGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG N+A + + C R ++YIGV++DDL + G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGTNAALQVQGRESWCPRRDEAYIGVLVDDLITMGTTEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT G +LG + + R K+F+ + R LKS + Sbjct: 426 YRMFTSRAEYRLLLREDNADMRLTEKGRELGLVDDDRWKQFSDKREAIELERQRLKSTWI 485 Query: 484 TSKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + ++ +S + K Y E L P+ + + S+ P+ + + E+++I++ Sbjct: 486 QPTSDTAEKLSAHIENKLSHEYSLFELLKRPEIDYKIIGSLYPE-HQVEHKIAEQVEIDA 544 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y+ Y RQ E ++ E IP +F+Y S+ LSNE+K+KLS P L +A +I G Sbjct: 545 KYSGYIIRQQDEVNRLRRHENTRIPVNFNYQSVKGLSNEVKQKLSEATPETLARAGRIPG 604 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA++LL++ +KK+ Sbjct: 605 VTPAAISLLIVQLKKH 620 >gi|227113932|ref|ZP_03827588.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 629 Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust. Identities = 291/620 (46%), Positives = 395/620 (63%), Gaps = 15/620 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA+ Sbjct: 7 FDVIVIGGGHAGTEAAMASARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAM 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM R D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMARAVDQAGIQFRILNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLTIFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLARR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +TI + +Q D + FSF+ + + Q+ C IT Sbjct: 187 LRELPLRVNRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFLGNASQHPAQMPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNTHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE K + GLF Sbjct: 307 IYPNGISTSLPFDVQWQIVRSMAGMENARIVRPGYAIEYDFFDPRDLKPTLENKFVHGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQG++AG+N+AR + + R +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGMLAGLNAARLAADKEGWSPRRDQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R L+ + + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEMGRELGMVDDHRWARFNEKLENIEKERQRLRDIHVH 486 Query: 485 SK--------NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIER 535 + +L T +S + +G+ E L P+ L ++ A + E+ Sbjct: 487 PQSEQLDQVNSLLKTPLSREANGE-----ELLRRPEVDYVQLTALPLFAPGLTDEQAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y RQ E ++ + E L+P D DY + LSNE+ KL+ KP ++ QA Sbjct: 542 VEIQVKYEGYIARQQDEIEKQQRNENALLPADLDYKQVSGLSNEVIAKLNDHKPSSIGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G+TPAA+++LLI++KK Sbjct: 602 SRISGITPAAISILLIWLKK 621 >gi|32034340|ref|ZP_00134540.1| COG0445: NAD/FAD-utilizing enzyme apparently involved in cell division [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126209119|ref|YP_001054344.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Actinobacillus pleuropneumoniae L20] gi|166222902|sp|A3N2V3|MNMG_ACTP2 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|126097911|gb|ABN74739.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 630 Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust. Identities = 300/617 (48%), Positives = 390/617 (63%), Gaps = 7/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA+ Sbjct: 7 YDVIVVGGGHAGTEAALAPARMGLKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKEIDAM 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q EV Sbjct: 67 GGLMAIAIDQAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIFQQEVV 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E N V + + +VVLT GTFL G IHIG GR GD + L + Sbjct: 127 DILVENNRAVGAVTKMGLTFKARSVVLTAGTFLAGKIHIGLDNYAGGRAGDPAATMLADR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQIECGITR 244 + RLKTGTP RLD +TI +D KQ D L SFM + + RQI C IT Sbjct: 187 LRDLNLRVDRLKTGTPPRLDARTINFDVLAKQHGDAELPVMSFMGSVDLHPRQIPCHITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I ++ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL+T Sbjct: 247 TNEQTHDLIRNSLDRSPMYTGIIEGIGPRYCPSIEDKVMRFSDRNSHQIYLEPEGLSTIE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LP ++Q + ++ GLEK II+PGYAIEYDY +P++L PTLETK I GLF Sbjct: 307 VYPNGISTSLPFDVQMGIVNSMKGLEKTRIIKPGYAIEYDYFDPRDLKPTLETKAIEGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AGIN+A + + +R +Y GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGINAALQVQGKEAWFPTRDLAYTGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL- 483 R+FTSRAEYR+ LR DNAD RLTPI +LG I + R RF + ++ R LK + + Sbjct: 427 RVFTSRAEYRLLLREDNADIRLTPIAHELGLIDDARWARFNQKMENIERERERLKQIWIH 486 Query: 484 -TSKNLSSTSISFKQDGKTRTAY--EFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIE 539 S++L+ + TR A + L P+ + L + A E+++I Sbjct: 487 PQSEHLAVVN-ELVNSPLTREASGEDLLRRPEVTYDKLTQVAAFAPALDDKQAAEQVEIS 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y Q E + K E LIP +FDY + +LSNE++ KL +P ++ QAS+I Sbjct: 546 IKYQGYIEHQQNEIERHKRHENTLIPAEFDYDKVESLSNEVRAKLMQHRPVSIGQASRIS 605 Query: 600 GMTPAALNLLLIYIKKN 616 G+TPAA+++LL+ +KK Sbjct: 606 GITPAAISILLVNLKKQ 622 >gi|307547045|ref|YP_003899524.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Halomonas elongata DSM 2581] gi|307219069|emb|CBV44339.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Halomonas elongata DSM 2581] Length = 631 Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust. Identities = 289/614 (47%), Positives = 392/614 (63%), Gaps = 5/614 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA +A+ G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FDVIVIGGGHAGTEAALASARTGCRTLLLTHNIETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG D GIQFRVLN +KGPAVR R QADR Y+ A++ + +Q NL + Q Sbjct: 67 GGAMGLATDMGGIQFRVLNARKGPAVRATRAQADRVRYKAAIRGMLENQANLTIFQQAAG 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + + TVVL TGTFL GVIHIG GR GD PSN+L Sbjct: 127 DLIVEGDQVRGVCTETGIRFMSETVVLCTGTFLGGVIHIGLDNSRGGRAGDPPSNALAER 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 F RLKTGTP RLD K++ + K ++Q DE S++ ++ + RQ+ C I Sbjct: 187 LRALPFRVDRLKTGTPPRLDAKSVDFSKLDEQPGDEPTPVMSYLGERSQHPRQVSCHIAH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N++ S ++SG I+ GPRYCPSIEDK+ RF +++ HQIF+EPEGL+T Sbjct: 247 TNERTHEIIHANLERSPMFSGVIEGVGPRYCPSIEDKVHRFADKSSHQIFVEPEGLDTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R+I GLE +I RPGYAIEYD+ +P++L +LETK I L+ Sbjct: 307 LYPNGISTSLPFDVQLQVVRSIQGLENAHITRPGYAIEYDFFDPRDLKHSLETKFIHNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG+N+AR++ LD R ++Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGLNAARRARGLDAWWPRRDEAYLGVLVDDLITLGTREPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + ERR F+ + S L+S + Sbjct: 427 RMFTSRAEYRLLLREDNADMRLTETGRELGLVDERRWTAFSAKREAVERETSRLRSSWVQ 486 Query: 485 SKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 + ++ IS + Y + L P+ +++ + + + V E++QI++ Sbjct: 487 PGSEAARRISETTGQSLKREYNLLDLLKRPEIGYRDVAGLVGEPVD-NDQVAEQVQIQAK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y RQ E ++K E +P D DY + LSNE+++KL +P L QAS+I G+ Sbjct: 546 YQGYIDRQQDEIDKLKRHEATPLPDDLDYDQVDGLSNEIRQKLVEARPETLAQASRISGV 605 Query: 602 TPAALNLLLIYIKK 615 TPAA+++LLI++KK Sbjct: 606 TPAAVSILLIHLKK 619 >gi|223041389|ref|ZP_03611593.1| glucose-inhibited division protein A [Actinobacillus minor 202] gi|223017779|gb|EEF16185.1| glucose-inhibited division protein A [Actinobacillus minor 202] Length = 630 Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust. Identities = 295/619 (47%), Positives = 387/619 (62%), Gaps = 5/619 (0%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 N++YDVIV+GGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+EI Sbjct: 4 NKTYDVIVVGGGHAGTEAALAPARMGLKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKEI 63 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DA+ GLM D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q Sbjct: 64 DAMGGLMATATDKAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIFQQ 123 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 EV E N V + + V+LT GTFL G IHIG GR GD + L Sbjct: 124 EVVDILVENNRAVGAVTKMGLTFKAKAVILTAGTFLAGKIHIGLDNYAGGRAGDPAATML 183 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQIECG 241 + + RLKTGTP RLD +TI +D KQ D+ L SFM + + RQI C Sbjct: 184 ADRLRDLNLRVDRLKTGTPPRLDARTINFDVLAKQHGDDVLPVMSFMGSVEQHPRQIPCY 243 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT TN +TH +I ++ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL Sbjct: 244 ITHTNEQTHDLIRNSLDRSPMYTGIIEGIGPRYCPSIEDKVMRFSDRNSHQIYLEPEGLT 303 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T VYPNGIST+LP ++Q + ++ GLE II+PGYAIEYDY +P++L PTLETK I Sbjct: 304 TIEVYPNGISTSLPFDVQMGIVNSMKGLENTRIIKPGYAIEYDYFDPRDLKPTLETKAID 363 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQINGTTGYEEAAAQGL+AGIN+ + + +R +Y GV++DDL + G Sbjct: 364 GLFFAGQINGTTGYEEAAAQGLLAGINAGLQVQGKEAWFPTRDLAYTGVLVDDLCTLGTK 423 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+FTSRAEYR+ LR DNAD RLTPI + G I E R RF + ++ ++ LK Sbjct: 424 EPYRVFTSRAEYRLLLREDNADARLTPIAHQFGLIDEARWTRFNEKMENIEKEKARLKQT 483 Query: 482 V--LTSKNLSSTSISFKQD-GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VIERLQ 537 L NL+ + + + + + P+ + + L I P A E+++ Sbjct: 484 WAHLQMANLAEVNALLNSPLAREASGEDLIRRPEVTYEALTQIAPFAPAIEDKEAAEQVE 543 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I Y Y Q E + K E IP +FDY + +LSNE++ KL +P ++ QAS+ Sbjct: 544 ISIKYQGYIEHQQQEIERHKRHENTQIPAEFDYDKVESLSNEVRAKLMQHRPVSIGQASR 603 Query: 598 IEGMTPAALNLLLIYIKKN 616 I G+TPAA+++LL+ +KK Sbjct: 604 ISGITPAAISILLVNLKKQ 622 >gi|254491056|ref|ZP_05104237.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Methylophaga thiooxidans DMS010] gi|224463569|gb|EEF79837.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Methylophaga thiooxydans DMS010] Length = 627 Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust. Identities = 288/615 (46%), Positives = 388/615 (63%), Gaps = 4/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAG EAA +A+ G T L+T T+G MSCNPAIGG+GKGHLV+EIDAL Sbjct: 7 YDVIVVGGGHAGTEAALASARQGVKTLLLTQNIETLGQMSCNPAIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+M + AD GIQFR LN KGPAVR R QADR Y+ A++ + +Q NL + Q V Sbjct: 67 GGIMAQAADRGGIQFRTLNSSKGPAVRATRAQADRVRYKAAVRAYLENQPNLYIFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + +V Q +VVLT GTFL G+IHIG GR GD S +L Sbjct: 127 DLVVENDRVVGVVTQVGLRFSAKSVVLTVGTFLGGLIHIGMQNHQGGRAGDPASIALSQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 F RLKTGTP R+ +I + +Q D FSF+ + + RQI C IT Sbjct: 187 LRSLPFRVDRLKTGTPPRIATSSIDFSVLTEQPGDNPTPVFSFLGKQADHPRQISCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH +I N+ S +YSG+I+ GPRYCPSIEDK+VRF +R HQIFLEPEGL Sbjct: 247 TNEHTHEVIRNNLDRSPMYSGEIEGIGPRYCPSIEDKVVRFADRTAHQIFLEPEGLEPGE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LP ++Q++ +R++ GLE +I RPGYAIEYD+ +P++L PTLETK + GLF Sbjct: 307 VYPNGISTSLPFDVQYEIVRSMKGLENAHITRPGYAIEYDFFDPRDLQPTLETKHMGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG+N+ ++ LD R ++YIGV+IDDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLIAGLNAGLQARGLDGWYPRRDEAYIGVLIDDLITSGTREPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLTP+G +LG + + R F+ + L+S Sbjct: 427 RMFTSRAEYRLMLREDNADIRLTPVGRQLGIVDDERWAIFSAKQDAVAKENARLESFKFV 486 Query: 485 SKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 + + T+ + ++ K +A E L P L + + + V E++ I++ Sbjct: 487 PEKIDQTTAEAVLGEKLNKVTSAIELLRRPKVDYAMLLELMGTEQAVADDVAEQVVIQTK 546 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y+ Y RQ E ++ E +P + DY ++ LSNE++EKL +P NL QA++I G+ Sbjct: 547 YSGYINRQQNEIDRLQRNENMSLPTNMDYKNVRGLSNEVREKLEQARPVNLGQAARISGV 606 Query: 602 TPAALNLLLIYIKKN 616 TPAA++LLL+++K++ Sbjct: 607 TPAAVSLLLVHLKRS 621 >gi|331007814|ref|ZP_08330919.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [gamma proteobacterium IMCC1989] gi|330418381|gb|EGG92942.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [gamma proteobacterium IMCC1989] Length = 637 Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust. Identities = 293/625 (46%), Positives = 404/625 (64%), Gaps = 13/625 (2%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 + YDVIVIGGGHAG EA AA++G ST L+TH T+G MSCNPAIGG+GK HLV+EI Sbjct: 4 SHHYDVIVIGGGHAGTEACLAAARMGCSTLLLTHNIETLGQMSCNPAIGGIGKSHLVKEI 63 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREIL-SQENLDVIQ 121 DA+ G M + D GIQFRVLN +KGPAVR R QADR LY+ A+ REIL +QENL + Q Sbjct: 64 DAMGGAMAQATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAV-REILENQENLQIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E + + +V Q ++VVLT GTFL G IHIG GR GD PS + Sbjct: 123 QSVDDLIIEGDTVKGVVTQMGLKFYGTSVVLTAGTFLGGKIHIGLENHSGGRAGDPPSIA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIEC 240 L + +F RLKTGTP R+D K++ + + ++Q+ D L S+M + + Q+ C Sbjct: 183 LADRLREFPLRVDRLKTGTPPRIDAKSVDFSQLQEQWGDTPLPVMSYMGNVADHPEQVCC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH II + S +Y+G I+ GPRYCPSIEDK+ RF +++ HQIF+EPEGL Sbjct: 243 WITYTNQKTHDIIRSGMDRSPMYTGVIEGVGPRYCPSIEDKVSRFADKDSHQIFIEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T +YPNGIST+LP ++Q + +R+I G E +I+RPGYAIEYDY NP++L +LET+ I Sbjct: 303 KTHELYPNGISTSLPFDVQLELVRSINGFENAHIMRPGYAIEYDYFNPQDLRSSLETRCI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 +GLF AGQINGTTGYEEA AQGL+AG+N+ ++ + C R +YIGVM+DDL + G Sbjct: 363 NGLFFAGQINGTTGYEEAGAQGLLAGLNAGLRAQDKESWCPRRDQAYIGVMVDDLITLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAE+R+ LR DNAD+RLT +LG I + R + F + + LK+ Sbjct: 423 QEPYRMFTSRAEHRLLLREDNADSRLTEKARELGLIDDMRWQAFNEKKESIAKEEQRLKT 482 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSICPDARKFSS------- 530 + + + + ++ K Y E L P+ + +L + +F+ Sbjct: 483 TFVQANSDQANALVEKIKTPLTREYNLMELLKRPELTYADLGELFFKDSEFADSHVKIDP 542 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 V ++++I + Y+ Y RQ E K ++ E+ +P DFDYS++ LSNE K+KL +KP Sbjct: 543 QVSQQIEISAKYSGYIQRQEEEVKRLRQHEETPLPIDFDYSTVEGLSNEAKQKLMTMKPE 602 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 +L +AS+I+G+TPAA++LLL+Y+KK Sbjct: 603 SLGRASRIQGITPAAISLLLVYLKK 627 >gi|238921734|ref|YP_002935249.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Edwardsiella ictaluri 93-146] gi|238871303|gb|ACR71014.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA, putative [Edwardsiella ictaluri 93-146] Length = 629 Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust. Identities = 288/616 (46%), Positives = 392/616 (63%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMASARMGRQTLLLTHNIDTLGHMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D GIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAQAIDKGGIQFRILNGSKGPAVRATRAQADRILYRQAVRMALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLNGKIHIGLENYSGGRAGDPPSIGLARR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP RLD +TI + +Q D FSF+ + + RQ+ C IT Sbjct: 187 LRELPLRVNRLKTGTPPRLDARTIDFSVLAQQHGDNPAPVFSFLGEASQHPRQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL+++ Sbjct: 247 TNEHTHEVIRGNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLSSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q +R++ G++ I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMAIVRSMAGMQNTRIVRPGYAIEYDFFDPRDLKPTLESKYIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+ R + L+ R ++Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAGRCAADLEGWMPRRDEAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL- 483 RMFTSRAEYR+ LR DNAD RLTPIG +LG + + R +F + ++ R L+ + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTPIGRELGLVDDVRWAQFNQKLENMERERQRLRETWVH 486 Query: 484 -TSKNLSSTSISFKQD-GKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 S+ + ++ K + + + L P+ L S+ P + E+++I+ Sbjct: 487 PQSERAAEVNVLLKTPLSREASGEDLLRRPEMDYATLTSLSPFYPPLADRQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P D DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYQGYIARQQDEIEKQLRNENTLLPADLDYRQVNGLSNEVIAKLNDHKPSSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 ITPAAISILLVWLKKQ 622 >gi|330952340|gb|EGH52600.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae Cit 7] gi|330987013|gb|EGH85116.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. lachrymans str. M301315] Length = 630 Score = 563 bits (1451), Expect = e-158, Method: Compositional matrix adjust. Identities = 292/618 (47%), Positives = 390/618 (63%), Gaps = 13/618 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIRETLENQPNLWIFQQACD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 127 DLIVEQDQVRGVVTQMGMRIFADSVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ +K + Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGNKEQHPPQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 247 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R+I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVRSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCTKRESIELEEQRLKSTWVR 486 Query: 485 SKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSI----CPDARKFSSLVIERLQ 537 +I+ Y L+ P+ +L SI C D + V E+++ Sbjct: 487 PGTEQGDAIAAHFGTPLTHEYNLLNLLTRPEIDYASLISITGQGCIDPQ-----VAEQVE 541 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I++ YA Y RQ E ++ E +P+D DY+++ LS E++ KL I +P L QAS+ Sbjct: 542 IKTKYAGYIDRQQDEIARLRASEDTRLPEDIDYAAISGLSKEIQSKLGITRPETLGQASR 601 Query: 598 IEGMTPAALNLLLIYIKK 615 I G+TPAA++LL+I++KK Sbjct: 602 IPGVTPAAISLLMIHLKK 619 >gi|227327865|ref|ZP_03831889.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 629 Score = 563 bits (1451), Expect = e-158, Method: Compositional matrix adjust. Identities = 292/620 (47%), Positives = 395/620 (63%), Gaps = 15/620 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA+ Sbjct: 7 FDVIVIGGGHAGTEAAMASARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAM 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM R D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMARAVDQAGIQFRILNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLARR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +TI + +Q D + FSF+ + + Q+ C IT Sbjct: 187 LRELPLRVNRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFLGNASQHPAQMPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNTHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE K I GLF Sbjct: 307 IYPNGISTSLPFDVQWQIVRSMAGMENARIVRPGYAIEYDFFDPRDLKPTLENKFIHGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQG++AG+N+AR + + R +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGMLAGLNAARLAADKEGWSPRRDQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R L+ + + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEMGRELGMVDDHRWARFNEKLENIEKERQRLRDIHVH 486 Query: 485 SK--------NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIER 535 + +L T +S + +G+ E L P+ L ++ A + E+ Sbjct: 487 PQSEQLDQINSLLKTPLSREANGE-----ELLRRPEVDYVQLTALPLFAPGLTDEQAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y RQ E ++ + E L+P D DY + LSNE+ KL+ KP ++ QA Sbjct: 542 VEIQVKYEGYIARQQDEIEKQQRNENALLPADLDYKQVSGLSNEVIAKLNDHKPSSIGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G+TPAA+++LLI++KK Sbjct: 602 SRISGITPAAISILLIWLKK 621 >gi|123444382|ref|YP_001008347.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Yersinia enterocolitica subsp. enterocolitica 8081] gi|166224338|sp|A1JTD9|MNMG_YERE8 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|122091343|emb|CAL14229.1| glucose inhibited division protein A [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 629 Score = 563 bits (1451), Expect = e-158, Method: Compositional matrix adjust. Identities = 293/616 (47%), Positives = 396/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAMATDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQPVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V + R VVLT GTFL G IHIG GR GD PS SL Sbjct: 127 DLIVENDRVVGAVTKMGLKFRAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPSISLSQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +TI + + Q D + FSF+ + + Q+ C IT Sbjct: 187 LRELPLRVNRLKTGTPPRIDARTIDFSQLAPQLGDTPIPVFSFLGNASQHPEQMACHITY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNSHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ GLE I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMKGLENARIVRPGYAIEYDFFDPRDLKPTLESKYIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+ R +N D R ++Y+GV++DDL++ G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAGRFANDEDGWSPRRDEAYLGVLVDDLSTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL- 483 RMFTSRAEYR+ LR DNAD RLT +G KLG + + R F++ I++ R L+ + + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEMGRKLGLVDDARWAHFSQKIEQIEKERQRLRDIWVH 486 Query: 484 -TSKNLSSTSISFKQD-GKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 S+N++ + K K E L P+ + L ++ + ++++I+ Sbjct: 487 PHSENVAEINAVLKAPLSKEANGEELLRRPEIDYRLLTTLPSFGPALTDPQAADQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P D DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQEEIEKQLRNENTLLPADLDYRQVSGLSNEVIAKLNDHKPNSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 ITPAAISILLVWLKKQ 622 >gi|253690608|ref|YP_003019798.1| glucose inhibited division protein A [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259495849|sp|C6DJG3|MNMG_PECCP RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|251757186|gb|ACT15262.1| glucose inhibited division protein A [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 629 Score = 563 bits (1451), Expect = e-158, Method: Compositional matrix adjust. Identities = 292/620 (47%), Positives = 394/620 (63%), Gaps = 15/620 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA+ Sbjct: 7 FDVIVIGGGHAGTEAAMASARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAM 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM R D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMARAVDQAGIQFRILNSSKGPAVRATRAQADRVLYRQAIRTALENQPNLTIFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLARR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +TI + +Q D + FSF+ + + Q+ C IT Sbjct: 187 LRELPLRVNRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFLGNASQHPAQMPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNTHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE K + GLF Sbjct: 307 IYPNGISTSLPFDVQWQIVRSMTGMENARIVRPGYAIEYDFFDPRDLKPTLENKFVHGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQG++AG+N+AR + + R +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGMLAGLNAARLAADKEGWSPRRDQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R L+ + + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGMVDDHRWARFNEKLESIEKERQRLRDIHIH 486 Query: 485 SK--------NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIER 535 + +L T +S + +G+ E L P+ L ++ A + E+ Sbjct: 487 PQSELLDQVNSLLKTPLSREANGE-----ELLRRPEVDYVQLTALPLFAPGLTDEQAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y RQ E ++ E L+P D DY + LSNE+ KL+ KP ++ QA Sbjct: 542 VEIQVKYEGYIARQQDEIEKQLRNENTLLPADLDYKQVNGLSNEVIAKLNDHKPSSIGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G+TPAA+++LLI++KK Sbjct: 602 SRISGITPAAISILLIWLKK 621 >gi|167854772|ref|ZP_02477550.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Haemophilus parasuis 29755] gi|167854070|gb|EDS25306.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Haemophilus parasuis 29755] Length = 630 Score = 563 bits (1451), Expect = e-158, Method: Compositional matrix adjust. Identities = 299/622 (48%), Positives = 387/622 (62%), Gaps = 6/622 (0%) Query: 1 MINRS-YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLV 59 MI R YDVIV+GGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV Sbjct: 1 MIYREIYDVIVVGGGHAGTEAALAPARMGLKTLLLTHNVDTLGQMSCNPAIGGIGKGHLV 60 Query: 60 REIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDV 119 +EIDA+ GLM D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Sbjct: 61 KEIDAMGGLMATATDKAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDI 120 Query: 120 IQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 Q EV E N V + + V+LT GTFL G IHIG GR GD + Sbjct: 121 FQQEVVDILVENNRAVGAVTKMGLAFKAKAVILTAGTFLAGKIHIGLDNYAGGRAGDPAA 180 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQI 238 L + + RLKTGTP RLD +TI +D KQ DE L SFM + + RQI Sbjct: 181 TMLADRLRDLNLRVDRLKTGTPPRLDARTINFDVLAKQHGDEVLPVMSFMGSVEQHPRQI 240 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C IT TN +TH +I ++ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPE Sbjct: 241 PCYITHTNEQTHDLIRNSLDRSPMYTGIIEGIGPRYCPSIEDKVMRFSDRNSHQIYLEPE 300 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL T VYPNGIST+LP ++Q + ++ GLE II+PGYAIEYDY +P++L PTLETK Sbjct: 301 GLTTIEVYPNGISTSLPFDVQMGIVNSMKGLENTRIIKPGYAIEYDYFDPRDLKPTLETK 360 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I GLF AGQINGTTGYEEAAAQGL+AGIN+ + D +R +Y GV++DDL + Sbjct: 361 AIDGLFFAGQINGTTGYEEAAAQGLLAGINAGLQVQGKDAWFPTRDLAYTGVLVDDLCTL 420 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYR+FTSRAEYR+ LR DNAD RLTPI + G I E R RF + ++ ++ L Sbjct: 421 GTKEPYRVFTSRAEYRLLLREDNADARLTPIAHQFGLIDEARWARFNEKMENIEKEKARL 480 Query: 479 KSLV--LTSKNLSSTSISFKQD-GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VIE 534 K L NL+ + + + + + P+ + + L I P A E Sbjct: 481 KQTWAHLQMANLAEVNALLNSPLAREASGEDLIRRPEVTYEALTQIAPFAPAIEDKEAAE 540 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I Y Y Q E + K E IP +FDY + +LSNE++ KL +P ++ Q Sbjct: 541 QVEISIKYQGYIEHQQQEIERHKRHENTQIPAEFDYDKVESLSNEVRAKLMQHRPVSIGQ 600 Query: 595 ASKIEGMTPAALNLLLIYIKKN 616 AS+I G+TPAA+++LL+ +KK Sbjct: 601 ASRISGITPAAISILLVNLKKQ 622 >gi|259910326|ref|YP_002650682.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Erwinia pyrifoliae Ep1/96] gi|224965948|emb|CAX57481.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme, Glucose-inhibited division protein A [Erwinia pyrifoliae Ep1/96] gi|283480449|emb|CAY76365.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Erwinia pyrifoliae DSM 12163] Length = 629 Score = 563 bits (1451), Expect = e-158, Method: Compositional matrix adjust. Identities = 296/616 (48%), Positives = 387/616 (62%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIVIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLMG D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMGHAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLLVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGMDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGITR 244 + GRLKTGTP R+D +TI + Q D L FSFM D + +Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSLLAPQHGDNPLPVFSFMGDVRQHPQQVPCYITY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHEVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMHGMENAKIVRPGYAIEYDFFDPRDLKPTLESKYIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+ R S + R +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAGRLSADKESWAPRRDQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R RF + ++ R L+ + + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTAAGRELGLVDDARWARFNEKLESIEQERQRLRDIWVH 486 Query: 485 SKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICP-DARKFSSLVIERLQIES 540 K+ S+ K + + L P+ + Q L ++ + E+++I+ Sbjct: 487 PKSECVADVNSVISAALTKEASGEDLLRRPEMTYQQLMTLSHFAPALADAQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E E +P D DY + LSNE KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQEEIDRQLRNENTALPVDLDYQQVSGLSNEAIAKLNESKPGSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LLIY+KK Sbjct: 607 ITPAAISILLIYLKKQ 622 >gi|88607384|ref|YP_504843.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Anaplasma phagocytophilum HZ] gi|123495646|sp|Q2GLA8|MNMG_ANAPZ RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|88598447|gb|ABD43917.1| pyridine nucleotide-disulfide oxidoreductase [Anaplasma phagocytophilum HZ] Length = 628 Score = 563 bits (1450), Expect = e-158, Method: Compositional matrix adjust. Identities = 286/590 (48%), Positives = 385/590 (65%), Gaps = 6/590 (1%) Query: 31 TALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPA 90 T L+THK +IG MSCNPAIGG+ KG +VRE+DALDGLMG+V D + I +LN KGPA Sbjct: 29 TLLVTHKVESIGEMSCNPAIGGIAKGVVVREVDALDGLMGKVIDKSSIHSIILNRSKGPA 88 Query: 91 VRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNT----EKNIISSIVMQDNSMIR 146 V GPR QADRE+Y+ M+ +L ENL VI EV F E+ ISS+++ + +I+ Sbjct: 89 VWGPRAQADREVYKPTMRDMVLHYENLTVISEEVVDFTVDGVEERPQISSVLLSNGELIK 148 Query: 147 CSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDG 206 + +V TGTFL G IH+G PAGR+GD PS L + F GRLKTGTP R+D Sbjct: 149 TTRLVFATGTFLGGTIHVGNESFPAGRIGDKPSTKLPQALTAHGFQLGRLKTGTPPRIDR 208 Query: 207 KTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGD 266 +I W K +Q D PFSFM++ ++ QI C +T TN +TH II N+ + Sbjct: 209 DSINWSKLLEQKGDVLPTPFSFMSECVSLPQISCYVTHTNEKTHEIIRRNLHLAGSRCES 268 Query: 267 I-KSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRT 325 + PRYCPSIE+KI RF + HQIFLEPEGL T+ VYPNGIST+ P E+Q + +R+ Sbjct: 269 LLDVMAPRYCPSIEEKIRRFPDHKSHQIFLEPEGLETNSVYPNGISTSCPIEVQLEMLRS 328 Query: 326 IPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVA 385 I GLE+ ++R GY +EY++I+P+EL+ TLETKKI GLF AGQINGTTGYEEAA QG+VA Sbjct: 329 INGLEQAVMLRHGYTVEYNFIDPRELYHTLETKKIKGLFCAGQINGTTGYEEAAGQGIVA 388 Query: 386 GINSARK-SNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADN 444 G N+A + + R+DSYIGVMIDDL + G EPYR+FTSRAEYR++LR DNAD Sbjct: 389 GANAALSLVQNQEPLVLKRSDSYIGVMIDDLVTLGTSEPYRLFTSRAEYRLTLRSDNADM 448 Query: 445 RLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTA 504 RLT IG + + R R ++ QE + L + LK +V T +++ I+ Q+G+ + A Sbjct: 449 RLTEIGRAYSLVSQERFDRLSQKKQEMHALLNALKGIVATPNDIAEYDIAIAQNGEKKNA 508 Query: 505 YEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLI 564 +E LS+P+ +++ L I P R FS+ + ++IE YA Y RQ + K EE I Sbjct: 509 FELLSHPNINMEVLLKIWPSLRSFSAGTLALMEIEGKYAPYLKRQEADIKSFLEEENLSI 568 Query: 565 PKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIK 614 PKD YS + LS E +EKL +KPF++ A +I G+TPAA+ +LI+++ Sbjct: 569 PKDILYSDVYGLSKEAQEKLQAVKPFSIGAARRIPGITPAAIANILIHLR 618 >gi|331011893|gb|EGH91949.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 630 Score = 563 bits (1450), Expect = e-158, Method: Compositional matrix adjust. Identities = 291/618 (47%), Positives = 390/618 (63%), Gaps = 13/618 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIRETLENQPNLWIFQQACD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 127 DLIVEQDQVRGVVTQMGMRIFADSVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ +K + Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGNKEQHPPQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 247 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R+I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVRSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCTKRESIELEEQRLKSTWVR 486 Query: 485 SKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSI----CPDARKFSSLVIERLQ 537 +I+ Y L+ P+ +L +I C D + V E+++ Sbjct: 487 PGTEQGDAIAAHFGTPLTHEYNLLNLLTRPEIDYASLIAITGQGCTDPQ-----VAEQVE 541 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I++ YA Y RQ E ++ E +P+D DY+++ LS E++ KL I +P L QAS+ Sbjct: 542 IKTKYAGYIDRQQDEIARLRASEDTRLPEDIDYAAISGLSKEIQSKLGITRPETLGQASR 601 Query: 598 IEGMTPAALNLLLIYIKK 615 I G+TPAA++LL+I++KK Sbjct: 602 IPGVTPAAISLLMIHLKK 619 >gi|257485605|ref|ZP_05639646.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 631 Score = 563 bits (1450), Expect = e-158, Method: Compositional matrix adjust. Identities = 291/618 (47%), Positives = 390/618 (63%), Gaps = 13/618 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 8 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 68 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIRETLENQPNLWIFQQACD 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 128 DLIVEQDQVRGVVTQMGMRIFADSVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAQR 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ +K + Q+ C IT Sbjct: 188 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGNKEQHPPQVSCWITH 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 248 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R+I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 308 LYPNGISTSLPFDVQLQIVRSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 368 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 428 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCTKRESIELEEQRLKSTWVR 487 Query: 485 SKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSI----CPDARKFSSLVIERLQ 537 +I+ Y L+ P+ +L +I C D + V E+++ Sbjct: 488 PGTEQGDAIAAHFGTPLTHEYNLLNLLTRPEIDYASLIAITGQGCTDPQ-----VAEQVE 542 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I++ YA Y RQ E ++ E +P+D DY+++ LS E++ KL I +P L QAS+ Sbjct: 543 IKTKYAGYIDRQQDEIARLRASEDTRLPEDIDYAAISGLSKEIQSKLGITRPETLGQASR 602 Query: 598 IEGMTPAALNLLLIYIKK 615 I G+TPAA++LL+I++KK Sbjct: 603 IPGVTPAAISLLMIHLKK 620 >gi|152972650|ref|YP_001337796.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|262040354|ref|ZP_06013600.1| glucose-inhibited division protein A [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330005171|ref|ZP_08305133.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Klebsiella sp. MS 92-3] gi|205831537|sp|A6TG45|MNMG_KLEP7 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|150957499|gb|ABR79529.1| glucose-inhibited division protein A [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|259042295|gb|EEW43320.1| glucose-inhibited division protein A [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328536377|gb|EGF62736.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Klebsiella sp. MS 92-3] Length = 629 Score = 563 bits (1450), Expect = e-158, Method: Compositional matrix adjust. Identities = 290/616 (47%), Positives = 392/616 (63%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +TI + +Q D + FSFM + RQ+ C IT Sbjct: 187 LRELPLRVSRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGSADQHPRQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENARIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + + R +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARFSAEKEGWAPRRDQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R R+ + ++ R LKS + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEQGRELGLVDDERWARYNEKLESIERERQRLKSTWVN 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 + S+ ++ + + + L P+ + + L + P E+++I+ Sbjct: 487 PQAESANEVNAHLTAPLSREASGEDLLRRPEMTYEQLVQLSPFTPGLEDRQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ + E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQQRNENTLLPATLDYRQVTGLSNEVIAKLNDHKPSSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 ITPAAISILLVWLKKQ 622 >gi|303249898|ref|ZP_07336100.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307250950|ref|ZP_07532876.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307253322|ref|ZP_07535194.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302650961|gb|EFL81115.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306856978|gb|EFM89108.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306859186|gb|EFM91227.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 630 Score = 563 bits (1450), Expect = e-158, Method: Compositional matrix adjust. Identities = 300/617 (48%), Positives = 390/617 (63%), Gaps = 7/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA+ Sbjct: 7 YDVIVVGGGHAGTEAALAPARMGLKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKEIDAM 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q EV Sbjct: 67 GGLMAIAIDQAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIFQQEVV 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E N V + + +VVLT GTFL G IHIG GR GD + L + Sbjct: 127 DILVENNRAVGAVTKMGLTFKARSVVLTAGTFLAGKIHIGLDNYAGGRAGDPAATMLADR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQIECGITR 244 + RLKTGTP RLD +TI +D KQ D L SFM + + RQI C IT Sbjct: 187 LRDLNLRVDRLKTGTPPRLDARTINFDVLAKQHGDAELPVMSFMGSVDLHPRQIPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I ++ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL+T Sbjct: 247 TNEQTHDLIRNSLDRSPMYTGIIEGIGPRYCPSIEDKVMRFSDRNSHQIYLEPEGLSTIE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LP ++Q + ++ GLEK II+PGYAIEYDY +P++L PTLETK I GLF Sbjct: 307 VYPNGISTSLPFDVQMGIVNSMKGLEKTRIIKPGYAIEYDYFDPRDLKPTLETKAIEGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AGIN+A + + +R +Y GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGINAALQVQGKEAWFPTRDLAYTGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL- 483 R+FTSRAEYR+ LR DNAD RLTPI +LG I + R RF + ++ R LK + + Sbjct: 427 RVFTSRAEYRLLLREDNADIRLTPIAHELGLIDDARWARFNQKMENIERERERLKQIWIH 486 Query: 484 -TSKNLSSTSISFKQDGKTRTAY--EFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIE 539 S++L+ + TR A + L P+ + L + A E+++I Sbjct: 487 PQSEHLAVVN-ELVNSPLTREASGEDLLRRPEVTYDKLTQVAAFAPALDDKQAAEQVEIS 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y Q E + K E LIP +FDY + +LSNE++ KL +P ++ QAS+I Sbjct: 546 IKYQGYIEHQQNEIERHKRHENTLIPAEFDYDKVESLSNEVRAKLMQHRPVSIGQASRIS 605 Query: 600 GMTPAALNLLLIYIKKN 616 G+TPAA+++LL+ +KK Sbjct: 606 GITPAAISILLVNLKKQ 622 >gi|50123437|ref|YP_052604.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pectobacterium atrosepticum SCRI1043] gi|81170541|sp|Q6CYI6|MNMG_ERWCT RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|49613963|emb|CAG77416.1| glucose inhibited division protein A [Pectobacterium atrosepticum SCRI1043] Length = 629 Score = 563 bits (1450), Expect = e-158, Method: Compositional matrix adjust. Identities = 292/620 (47%), Positives = 394/620 (63%), Gaps = 15/620 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA+ Sbjct: 7 FDVIVIGGGHAGTEAAMASARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAM 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM R D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMARAVDQAGIQFRILNSSKGPAVRATRAQADRVLYRQAIRTALENQPNLTIFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLARR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +TI + +Q D + FSF+ + + Q+ C IT Sbjct: 187 LRELPLRVNRLKTGTPPRIDARTIDFSVLPQQHGDNPMPVFSFLGNAGQHPAQMPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNTHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE K + GLF Sbjct: 307 IYPNGISTSLPFDVQWQIVRSMAGMENARIVRPGYAIEYDFFDPRDLKPTLENKFVHGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQG++AG+N+AR S + R +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGMLAGLNAARLSADKEGWSPRRDQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R L+ + + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEMGRELGMVDDHRWARFNEKLENIEKERQRLRDIHVH 486 Query: 485 SK--------NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIER 535 + +L T +S + +G+ E L P+ L ++ A + E+ Sbjct: 487 PQSELLDQVNSLLKTPLSREANGE-----ELLRRPEVDYAQLTALPLFAPGLTDEQAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y RQ E ++ E L+P D DY + LSNE+ KL+ KP ++ QA Sbjct: 542 VEIQVKYEGYIARQQDEIEKQLRNENALLPADLDYKQVNGLSNEVIAKLNDHKPSSIGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G+TPAA+++LLI++KK Sbjct: 602 SRISGITPAAISILLIWLKK 621 >gi|251791738|ref|YP_003006459.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Dickeya zeae Ech1591] gi|247540359|gb|ACT08980.1| glucose inhibited division protein A [Dickeya zeae Ech1591] Length = 629 Score = 563 bits (1450), Expect = e-158, Method: Compositional matrix adjust. Identities = 290/621 (46%), Positives = 395/621 (63%), Gaps = 15/621 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA+ Sbjct: 7 FDVIVIGGGHAGTEAAMASARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAM 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM R D GIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMARAIDRGGIQFRILNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLTLFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS +L + Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIALSHR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +TI + Q D+ + FSF+ + Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLTPQHGDDPMPVFSFLGKASEHPTQMPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNERTHDVIRSNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G++ I+RPGYAIEYDY +P++L PTLE+K I LF Sbjct: 307 IYPNGISTSLPFDVQWQIVRSMDGMQNARIVRPGYAIEYDYFDPRDLKPTLESKFIHNLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQG++AG+N+AR + + R +YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGMLAGLNAARLAFDQEGWTPRRDQAYIGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R L+ +++ Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTAIGRELGMVDDERWARFNEKLENIEKERQRLRDVLVH 486 Query: 485 SK--------NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIER 535 +L + +S + +G+ + Y + +F+ PD + E+ Sbjct: 487 PHSEGVEQINSLLKSPLSREANGEDLLRRPEMDYVQLTGLPMFAPALPDVQ-----AAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y RQ E ++ + E L+P D DY + LSNE+ KL+ KP ++ QA Sbjct: 542 VEIQVKYEGYIARQQDEIEKQQRNENTLLPADLDYRQVSGLSNEVIAKLNDHKPSSIGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKKN 616 S+I G+TPAA+++LL+++KK Sbjct: 602 SRISGITPAAISILLVWLKKQ 622 >gi|238897248|ref|YP_002921996.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Klebsiella pneumoniae NTUH-K2044] gi|238549578|dbj|BAH65929.1| glucose-inhibited division protein A [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 629 Score = 563 bits (1450), Expect = e-158, Method: Compositional matrix adjust. Identities = 290/616 (47%), Positives = 392/616 (63%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +TI + +Q D + FSFM + RQ+ C IT Sbjct: 187 LRELPLRVSRLKTGTPPRIDSRTIDFSVLAQQHGDNPMPVFSFMGSADQHPRQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENARIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + + R +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARFSAEKEGWAPRRDQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R R+ + ++ R LKS + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEQGRELGLVDDERWARYNEKLESIERERQRLKSTWVN 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 + S+ ++ + + + L P+ + + L + P E+++I+ Sbjct: 487 PQAESANEVNAHLTAPLSREASGEDLLRRPEMTYEQLVQLSPFTPGLEDRQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ + E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQQRNENTLLPATLDYRQVTGLSNEVIAKLNDHKPSSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 ITPAAISILLVWLKKQ 622 >gi|62182357|ref|YP_218774.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|75479634|sp|Q57HW9|MNMG_SALCH RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|62129990|gb|AAX67693.1| associate with glucose-inhibited division [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322716851|gb|EFZ08422.1| glucose-inhibited division protein A [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 629 Score = 563 bits (1450), Expect = e-158, Method: Compositional matrix adjust. Identities = 291/616 (47%), Positives = 393/616 (63%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVSRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIHGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEMGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 S+ ++ + + + L P+ + L S+ A E+++I+ Sbjct: 487 PSAESADEVNAHLTTPLSREASGEDLLRRPEMTYAQLTSLAAFAPALEDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TP A+++LL+++KK Sbjct: 607 VTPVAISILLVWLKKQ 622 >gi|213968448|ref|ZP_03396591.1| glucose-inhibited division protein A [Pseudomonas syringae pv. tomato T1] gi|301384265|ref|ZP_07232683.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. tomato Max13] gi|302131968|ref|ZP_07257958.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213926736|gb|EEB60288.1| glucose-inhibited division protein A [Pseudomonas syringae pv. tomato T1] Length = 630 Score = 562 bits (1449), Expect = e-158, Method: Compositional matrix adjust. Identities = 292/618 (47%), Positives = 388/618 (62%), Gaps = 13/618 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIREILENQPNLWIFQQACD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 127 DLIVEQDQVRGVVTQMGLRILADSVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ K + Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGSKEQHPAQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 247 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R+I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVRSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCTKRESIELEEQRLKSTWVR 486 Query: 485 SKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSI----CPDARKFSSLVIERLQ 537 +IS Y L+ P+ +L ++ C D LV E+++ Sbjct: 487 PGTQQGDAISAHFGTPLTHEYNLLNLLTRPEIDYNSLIALTGQGCAD-----PLVAEQVE 541 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I++ YA Y RQ E ++ E +P+D DY+ + LS E++ KL I +P L QAS+ Sbjct: 542 IKTKYAGYIDRQQEEIARLRASEDTRLPEDIDYTGISGLSKEIQSKLGITRPETLGQASR 601 Query: 598 IEGMTPAALNLLLIYIKK 615 I G+TPAA++LL+I++KK Sbjct: 602 IPGVTPAAISLLMIHLKK 619 >gi|237747167|ref|ZP_04577647.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Oxalobacter formigenes HOxBLS] gi|229378518|gb|EEO28609.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Oxalobacter formigenes HOxBLS] Length = 640 Score = 562 bits (1449), Expect = e-158, Method: Compositional matrix adjust. Identities = 298/624 (47%), Positives = 405/624 (64%), Gaps = 12/624 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+GGGHAG EAA V+A++G +T LITH T+G +SCNP+IGG+GK HLVRE+DA Sbjct: 6 NFDVIVVGGGHAGTEAALVSARMGRNTLLITHNFETLGQLSCNPSIGGIGKSHLVREVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G+M AD AGIQFRVLN KGPAVR R Q DR +YR A++ E+ +QENL + Q +V Sbjct: 66 LGGVMALAADKAGIQFRVLNSSKGPAVRATRVQIDRVIYRQAIRYELENQENLFLFQQQV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E+ ++ + + R S VVLT GTFL G I +G GR GD P+ +L Sbjct: 126 DDLIVEQGKVAGVRTEGGVEFRSSAVVLTAGTFLDGKIFVGLNSYSGGRSGDVPAIALAK 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTD-KITNRQIECGI 242 + + GRLKTGTP R+DG+TI + ++Q+ D IP FS + + Q+ C I Sbjct: 186 FLKELELPQGRLKTGTPPRIDGRTIDFSVMKEQWGDFDPIPVFSLRGNVSMHPEQLPCWI 245 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II + S +++G I+ GPRYCPSIEDKI RF ++N HQIFLEPEGL T Sbjct: 246 THTNSGTHDIIRSGLDRSPLFTGVIEGVGPRYCPSIEDKIHRFSDKNSHQIFLEPEGLKT 305 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 YPNGIST+LP + Q + + +IPGLEK +I+RPGYAIEYD+ +P+ L +LET++ISG Sbjct: 306 HEYYPNGISTSLPFDTQIELVHSIPGLEKAHILRPGYAIEYDFYDPRCLKSSLETRQISG 365 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AGIN+AR + R ++Y+GVMIDDL ++GV E Sbjct: 366 LFFAGQINGTTGYEEAAAQGLLAGINAARYVTGDEPWVPKRNEAYLGVMIDDLITQGVNE 425 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+SLR DNAD RLT +G K+GC+ + + + F + ++ +KS Sbjct: 426 PYRMFTSRAEYRLSLREDNADMRLTELGYKIGCVSKEQWENFQRKKEKIAREIERMKSTW 485 Query: 483 LTSKNLS---STSISFKQDGKTRTAYEFLSYPDFSIQNLFSI-------CPDARKFSSLV 532 + LS + + K + + + L PD + L S+ + Sbjct: 486 VHPSMLSVKEAERVIGKGIEREYSLADLLRRPDVTYDGLMSMISVENGNWKTDEELDGSE 545 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 E+++I+ YA Y RQ+ E K ++ E +P++ +YS + ALS E+++KL KP L Sbjct: 546 KEQVEIQIKYAGYIERQLREVKRQQYYENLRLPENMNYSEVNALSFEVRQKLDKQKPETL 605 Query: 593 LQASKIEGMTPAALNLLLIYIKKN 616 QAS+I G+TPAA++LLLIY+KK Sbjct: 606 GQASRISGVTPAAISLLLIYLKKQ 629 >gi|307255565|ref|ZP_07537370.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307260016|ref|ZP_07541728.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306861414|gb|EFM93403.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306865852|gb|EFM97728.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 630 Score = 562 bits (1449), Expect = e-158, Method: Compositional matrix adjust. Identities = 300/617 (48%), Positives = 390/617 (63%), Gaps = 7/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA+ Sbjct: 7 YDVIVVGGGHAGTEAALAPARMGLKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAM 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q EV Sbjct: 67 GGLMAIAIDQAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIFQQEVV 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E N V + + +VVLT GTFL G IHIG GR GD + L + Sbjct: 127 DILVENNRAVGAVTKMGLTFKARSVVLTAGTFLAGKIHIGLDNYAGGRAGDPAATMLADR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQIECGITR 244 + RLKTGTP RLD +TI +D KQ D L SFM + + RQI C IT Sbjct: 187 LRDLNLRVDRLKTGTPPRLDARTINFDVLAKQHGDAELPVMSFMGSVDLHPRQIPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I ++ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL+T Sbjct: 247 TNEQTHDLIRNSLDRSPMYTGVIEGIGPRYCPSIEDKVMRFSDRNSHQIYLEPEGLSTIE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LP ++Q + ++ GLEK II+PGYAIEYDY +P++L PTLETK I GLF Sbjct: 307 VYPNGISTSLPFDVQMGIVNSMKGLEKTRIIKPGYAIEYDYFDPRDLKPTLETKAIEGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AGIN+A + + +R +Y GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGINAALQVQGKEAWFPTRDLAYTGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL- 483 R+FTSRAEYR+ LR DNAD RLTPI +LG I + R RF + ++ R LK + + Sbjct: 427 RVFTSRAEYRLLLREDNADIRLTPIAHELGLIDDARWARFNQKMENIERERERLKQIWIH 486 Query: 484 -TSKNLSSTSISFKQDGKTRTAY--EFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIE 539 S++L+ + TR A + L P+ + L + A E+++I Sbjct: 487 PQSEHLAVVN-ELVNSPLTREASGEDLLRRPEVTYDKLTQVAAFAPALDDKQAAEQVEIS 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y Q E + K E LIP +FDY + +LSNE++ KL +P ++ QAS+I Sbjct: 546 IKYQGYIEHQQNEIERHKRHENTLIPAEFDYDKVESLSNEVRAKLMQHRPVSIGQASRIS 605 Query: 600 GMTPAALNLLLIYIKKN 616 G+TPAA+++LL+ +KK Sbjct: 606 GITPAAISILLVNLKKQ 622 >gi|303252046|ref|ZP_07338216.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307248704|ref|ZP_07530717.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|302649110|gb|EFL79296.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306854631|gb|EFM86821.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 630 Score = 562 bits (1449), Expect = e-158, Method: Compositional matrix adjust. Identities = 299/617 (48%), Positives = 391/617 (63%), Gaps = 7/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA+ Sbjct: 7 YDVIVVGGGHAGTEAALAPARMGLKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKEIDAM 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q EV Sbjct: 67 GGLMAIAIDQAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIFQQEVV 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E N + + + +VVLT GTFL G IHIG GR GD + L + Sbjct: 127 DILVENNRAVGAITKMGLTFKARSVVLTAGTFLAGKIHIGLDNYAGGRAGDPAATMLADR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQIECGITR 244 + RLKTGTP RLD +TI +D KQ D L SFM + + RQI C IT Sbjct: 187 LRDLNLRVDRLKTGTPPRLDARTINFDVLAKQHGDAELPVMSFMGSVDLHPRQIPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I ++ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL+T Sbjct: 247 TNEQTHDLIRNSLDRSPMYTGIIEGIGPRYCPSIEDKVMRFSDRNSHQIYLEPEGLSTIE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LP ++Q + ++ GLEK II+PGYAIEYDY +P++L PTLETK I GLF Sbjct: 307 VYPNGISTSLPFDVQMGIVNSMKGLEKTRIIKPGYAIEYDYFDPRDLKPTLETKAIEGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AGIN+A + + +R +Y GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGINAALQVQGKEAWFPTRDLAYTGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL- 483 R+FTSRAEYR+ LR DNAD RLTPI +LG I + R RF + ++ R LK + + Sbjct: 427 RVFTSRAEYRLLLREDNADIRLTPIAHELGLIDDARWARFNQKMENIERERERLKQIWIH 486 Query: 484 -TSKNLSSTSISFKQDGKTRTAY--EFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIE 539 S++L+ + TR A + L P+ + L + A E+++I Sbjct: 487 PQSEHLAVVN-ELVNSPLTREASGEDLLRRPEVTYDKLTQVAAFAPALDDKQAAEQVEIS 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y Q E + K E LIP +FDY ++ +LSNE++ KL +P ++ QAS+I Sbjct: 546 IKYQGYIEHQQNEIERHKRHENTLIPAEFDYDNVESLSNEVRAKLMQHRPVSIGQASRIS 605 Query: 600 GMTPAALNLLLIYIKKN 616 G+TPAA+++LL+ +KK Sbjct: 606 GITPAAISILLVNLKKQ 622 >gi|302063884|ref|ZP_07255425.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. tomato K40] Length = 631 Score = 562 bits (1449), Expect = e-158, Method: Compositional matrix adjust. Identities = 292/618 (47%), Positives = 388/618 (62%), Gaps = 13/618 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 8 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 68 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIREILENQPNLWIFQQACD 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 128 DLIVEQDQVRGVVTQMGLRILADSVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAQR 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ K + Q+ C IT Sbjct: 188 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGSKEQHPAQVSCWITH 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 248 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R+I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 308 LYPNGISTSLPFDVQLQIVRSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 368 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 428 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCTKRESIELEEQRLKSTWVR 487 Query: 485 SKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSI----CPDARKFSSLVIERLQ 537 +IS Y L+ P+ +L ++ C D LV E+++ Sbjct: 488 PGTQQGDAISAHFGTPLTHEYNLLNLLTRPEIDYNSLIALTGQGCAD-----PLVAEQVE 542 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I++ YA Y RQ E ++ E +P+D DY+ + LS E++ KL I +P L QAS+ Sbjct: 543 IKTKYAGYIDRQQEEIARLRASEDTRLPEDIDYTGISGLSKEIQSKLGITRPETLGQASR 602 Query: 598 IEGMTPAALNLLLIYIKK 615 I G+TPAA++LL+I++KK Sbjct: 603 IPGVTPAAISLLMIHLKK 620 >gi|330961498|gb|EGH61758.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. maculicola str. ES4326] Length = 630 Score = 562 bits (1449), Expect = e-158, Method: Compositional matrix adjust. Identities = 292/618 (47%), Positives = 388/618 (62%), Gaps = 13/618 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIRETLENQPNLWIFQQACD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 127 DLIVEQDQVRGVVTQLGMRILADSVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ K + Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGSKEQHPPQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 247 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R+I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVRSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCTKRESIALEEQRLKSTWVR 486 Query: 485 SKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSI----CPDARKFSSLVIERLQ 537 +I+ Y L+ P+ +L +I C D LV E+++ Sbjct: 487 PGTEQGDAIASHFGTPLTHEYNLLNLLTRPEIDYASLIAITGEGCTD-----PLVAEQVE 541 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I++ YA Y RQ E ++ E +P+D DY+ + LS E++ KL I +P L QAS+ Sbjct: 542 IKTKYAGYIDRQQDEIARLRASEDTRLPEDIDYAGISGLSKEIQSKLGITRPETLGQASR 601 Query: 598 IEGMTPAALNLLLIYIKK 615 I G+TPAA++LL+I++KK Sbjct: 602 IPGVTPAAISLLMIHLKK 619 >gi|332163559|ref|YP_004300136.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318608066|emb|CBY29564.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Yersinia enterocolitica subsp. palearctica Y11] gi|325667789|gb|ADZ44433.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330861789|emb|CBX71962.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Yersinia enterocolitica W22703] Length = 629 Score = 562 bits (1449), Expect = e-158, Method: Compositional matrix adjust. Identities = 293/616 (47%), Positives = 396/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAMATDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQPVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V + R VVLT GTFL G IHIG GR GD PS SL Sbjct: 127 DLIVENDRVVGAVTKMGLKFRAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPSISLSQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +TI + + Q D + FSF+ + + Q+ C IT Sbjct: 187 LRELPLRVNRLKTGTPPRIDARTIDFSQLAPQLGDTPIPVFSFLGNASQHPEQMACHITY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNSHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ GLE I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMKGLENARIVRPGYAIEYDFFDPRDLKPTLESKYIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+ R +N D R ++Y+GV++DDL++ G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAGRFANDEDGWSPRRDEAYLGVLVDDLSTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL- 483 RMFTSRAEYR+ LR DNAD RLT +G KLG + + R F++ I++ R L+ + + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEMGRKLGLVDDARWAHFSQKIEQIEKERQRLRDIWVH 486 Query: 484 -TSKNLSSTSISFKQD-GKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 S+N++ + K K E L P+ + L ++ + ++++I+ Sbjct: 487 PHSENVAEINAVLKAPLSKEANGEELLRRPEIDYRLLTTLPSFGPALTDPQAADQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P D DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYITRQQEEIEKQLRNENTLLPADLDYHQVSGLSNEVIAKLNDHKPNSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 ITPAAISILLVWLKKQ 622 >gi|165977091|ref|YP_001652684.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|205831485|sp|B0BRY1|MNMG_ACTPJ RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|165877192|gb|ABY70240.1| glucose inhibited division protein A [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 630 Score = 562 bits (1449), Expect = e-158, Method: Compositional matrix adjust. Identities = 300/617 (48%), Positives = 389/617 (63%), Gaps = 7/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA+ Sbjct: 7 YDVIVVGGGHAGTEAALAPARMGLKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKEIDAM 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q EV Sbjct: 67 GGLMAIAIDQAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIFQQEVV 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E N V + + +VVLT GTFL G IHIG GR GD + L + Sbjct: 127 DILVENNRAVGAVTKMGLTFKARSVVLTAGTFLAGKIHIGLDNYAGGRAGDPSATMLADR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQIECGITR 244 + RLKTGTP RLD +TI +D KQ D L SFM + RQI C IT Sbjct: 187 LRDLNLRVDRLKTGTPPRLDARTINFDVLAKQHGDAELPVMSFMGAVDLHPRQIPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I ++ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL+T Sbjct: 247 TNEQTHDLIRNSLDRSPMYTGVIEGSGPRYCPSIEDKVMRFSDRNSHQIYLEPEGLSTIE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LP ++Q + ++ GLEK II+PGYAIEYDY +P++L PTLETK I GLF Sbjct: 307 VYPNGISTSLPFDVQMGIVNSMKGLEKTRIIKPGYAIEYDYFDPRDLKPTLETKAIEGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AGIN+A + + +R +Y GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGINAALQVQGKEAWFPTRDLAYTGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL- 483 R+FTSRAEYR+ LR DNAD RLTPI +LG I + R RF + ++ R LK + + Sbjct: 427 RVFTSRAEYRLLLREDNADIRLTPIAHELGLIDDARWARFNQKMENIERERERLKQIWIH 486 Query: 484 -TSKNLSSTSISFKQDGKTRTAY--EFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIE 539 S++L+ + TR A + L P+ + L + A E+++I Sbjct: 487 PQSEHLAVVN-ELVNSPLTREASGEDLLRRPEVTYDKLTQVAAFAPALDDKQAAEQVEIS 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y Q E + K E LIP +FDY + +LSNE++ KL +P ++ QAS+I Sbjct: 546 IKYQGYIEHQQNEIERHKRHENTLIPAEFDYDKVESLSNEVRAKLMQHRPVSIGQASRIS 605 Query: 600 GMTPAALNLLLIYIKKN 616 G+TPAA+++LL+ +KK Sbjct: 606 GITPAAISILLVNLKKQ 622 >gi|206578873|ref|YP_002241278.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Klebsiella pneumoniae 342] gi|288937917|ref|YP_003441976.1| glucose inhibited division protein A [Klebsiella variicola At-22] gi|206567931|gb|ACI09707.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Klebsiella pneumoniae 342] gi|288892626|gb|ADC60944.1| glucose inhibited division protein A [Klebsiella variicola At-22] Length = 629 Score = 562 bits (1449), Expect = e-158, Method: Compositional matrix adjust. Identities = 290/616 (47%), Positives = 392/616 (63%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMATAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +TI + +Q D + FSFM + RQ+ C IT Sbjct: 187 LRELPLRVSRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGSADQHPRQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENARIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + + R +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARFSAEKEGWAPRRDQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R R+ + ++ R LKS + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEQGRELGLVDDERWARYNEKLESIERERQRLKSTWVN 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 + S+ ++ + + + L P+ + + L + P A E+++I+ Sbjct: 487 PQAESAAEVNAHLTAPLSREASGEDLLRRPEMTYEQLIQLSPFAPGLEDQQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ + E ++P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQQRNENTVLPATLDYRQVTGLSNEVIAKLNDHKPSSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 ITPAAISILLVWLKKQ 622 >gi|320321681|gb|EFW77780.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. glycinea str. B076] gi|320331116|gb|EFW87087.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. glycinea str. race 4] Length = 631 Score = 562 bits (1448), Expect = e-158, Method: Compositional matrix adjust. Identities = 291/620 (46%), Positives = 394/620 (63%), Gaps = 17/620 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 8 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 68 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIRETLENQPNLWIFQQACD 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 128 DLIVEQDQVRGVVTQMGMRIFADSVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAQR 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ +K + Q+ C IT Sbjct: 188 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGNKEQHPPQVSCWITH 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 248 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +++I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 308 LYPNGISTSLPFDVQLQIVQSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 368 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 428 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCTKRESIELEEQRLKSTWVR 487 Query: 485 SKNLSSTSISFKQDGKTRTAYEF-----LSYPDFSIQNLFSI----CPDARKFSSLVIER 535 +I+ + T +E+ L+ P+ +L +I C D + V E+ Sbjct: 488 PGTAQGDAIA--EHFGTPLTHEYNLLNLLTRPEIDYASLIAITGQGCTDPQ-----VAEQ 540 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I++ YA Y RQ E ++ E +P+D DY+++ LS E++ KL I +P L QA Sbjct: 541 VEIKTKYAGYIDRQQDEIARLRASEDTRLPEDIDYAAISGLSKEIQSKLGITRPETLGQA 600 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G+TPAA++LL+I++KK Sbjct: 601 SRIPGVTPAAISLLMIHLKK 620 >gi|307133313|ref|YP_003885329.1| glucose-inhibited cell-division protein [Dickeya dadantii 3937] gi|306530842|gb|ADN00773.1| glucose-inhibited cell-division protein [Dickeya dadantii 3937] Length = 629 Score = 562 bits (1448), Expect = e-158, Method: Compositional matrix adjust. Identities = 293/616 (47%), Positives = 390/616 (63%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA+ Sbjct: 7 FDVIVIGGGHAGTEAAMASARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAM 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAHAIDRAGIQFRILNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLTLFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS SL + Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSISLSHR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +TI + Q D+ + FSF+ + Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAPQHGDDPMPVFSFLGKAGEHPTQMPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNERTHDVIRSNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+ I+RPGYAIEYDY +P++L PTLE+K I LF Sbjct: 307 IYPNGISTSLPFDVQWQIVRSMDGMANARIVRPGYAIEYDYFDPRDLKPTLESKFIHNLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQG++AG+N+AR + + R +YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGMLAGLNAARLAFDQEGWTPRRDQAYIGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R L+ +++ Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTAMGRELGMVDDERWARFNEKLENIEKERQRLRDVLVH 486 Query: 485 SKNLSSTSI-SFKQDGKTRTA--YEFLSYPDFSIQNLFSICPDARKFSSL-VIERLQIES 540 + I S + +R A E L P+ L + A S E+++I+ Sbjct: 487 PQTEGVEQINSLLKSPLSREANGEELLRRPEMDYAQLTGLAMFAPALSDAEAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P D DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPADLDYRQVTGLSNEVIAKLNDHKPGSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKKQ 622 >gi|66805185|ref|XP_636325.1| hypothetical protein DDB_G0289183 [Dictyostelium discoideum AX4] gi|60464699|gb|EAL62825.1| hypothetical protein DDB_G0289183 [Dictyostelium discoideum AX4] Length = 778 Score = 562 bits (1448), Expect = e-158, Method: Compositional matrix adjust. Identities = 305/641 (47%), Positives = 414/641 (64%), Gaps = 34/641 (5%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DVIVIGGGHAG EA+A +A++G+ T LIT TIG MSCNP+IGG+GKG+LVREID Sbjct: 108 KEFDVIVIGGGHAGTEASAASARVGSKTLLITQSIDTIGVMSCNPSIGGVGKGNLVREID 167 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREI--LSQEN---LD 118 A+ G+MG AD +G QF+VLN KG AV GPR Q DRELYR ++ + ++Q+N L Sbjct: 168 AIGGIMGLAADESGCQFKVLNQSKGSAVHGPRAQIDRELYRESIHNLLWKITQDNGGNLS 227 Query: 119 VIQGEVAGF-------------NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIG 165 + +G V K I I++ + +I+C VV+TTGTFL G+IHIG Sbjct: 228 IKEGMVEDIILDEEEGGEEGDNGKNKKTIKGIILDNGEIIKCKKVVITTGTFLGGIIHIG 287 Query: 166 KLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP 225 +IP+GRMGD + +L + + F+ GRLKTGTP RLDGK+I + +Q DE +P Sbjct: 288 NKRIPSGRMGDKAATALSLTLNRIGFELGRLKTGTPPRLDGKSIDYSVMVEQVGDEIPLP 347 Query: 226 FSFMTDKITN--RQIECGITRTNLETHRIIMENIK-HSAIYSG-DIKSYGPRYCPSIEDK 281 FSF K+ N RQ++C +TRT E+H+II++N+ A+ SG D K GPRYCPSIE K Sbjct: 348 FSFSNSKVKNDQRQLKCFMTRTTEESHQIIIDNLSSRPALESGEDGKGLGPRYCPSIETK 407 Query: 282 IVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAI 341 I RF + HQ+++EPEG TDV+YPNGIS +LPE++Q +F++TIPGLE V +++PGYA+ Sbjct: 408 IERFQGKT-HQVWIEPEGYTTDVIYPNGISISLPEDVQMKFLKTIPGLENVKMLKPGYAV 466 Query: 342 EYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICF 401 EYDYI+P+EL TLETKKISGLFLAGQINGTTGYEEA AQG+VAGIN++ + Sbjct: 467 EYDYIDPRELNHTLETKKISGLFLAGQINGTTGYEEAGAQGIVAGINASLSHQNRPPMII 526 Query: 402 SRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR- 460 SR++ YIGV+IDDL + GV EPYRMFTSR+EYRISLR N+D RLT + G + Sbjct: 527 SRSEGYIGVLIDDLVTLGVTEPYRMFTSRSEYRISLRAHNSDQRLTEKAFEFGSASNHQL 586 Query: 461 ---QKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYP--DFSI 515 +++ + Q Y+ L+ + KS S+ L+ I + K + +E L P DF++ Sbjct: 587 QALKEKQSLLDQVYSKLKEIKKS---PSEYLTQCGIENVHEKK--SLFEILRRPHVDFNL 641 Query: 516 QNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPA 575 + K L I + E Y+ Y + +IE ++ E +LIP +Y + Sbjct: 642 IKRYLPTDLLEKIPPLYISIIDSECKYSNYVDKHVIEFNNLRKRENQLIPPSLNYWDISQ 701 Query: 576 LSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKN 616 LS E K+ LS +P N ASKI G+TP+AL + +YIKKN Sbjct: 702 LSTESKQILSKARPTNFSSASKISGITPSALFSIQVYIKKN 742 >gi|251793666|ref|YP_003008396.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Aggregatibacter aphrophilus NJ8700] gi|247535063|gb|ACS98309.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Aggregatibacter aphrophilus NJ8700] Length = 629 Score = 562 bits (1448), Expect = e-158, Method: Compositional matrix adjust. Identities = 294/617 (47%), Positives = 392/617 (63%), Gaps = 5/617 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIGGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLVREIDA Sbjct: 6 TYDVIVIGGGHAGTEAALAPARMGLKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVREIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 + GLM AD AGIQFR LN KGPAVR R Q DR LYR A++ + +Q NLD+ Q EV Sbjct: 66 MGGLMATAADQAGIQFRTLNSSKGPAVRATRAQVDRVLYRQAVRIALENQPNLDIFQQEV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + E++ + +V + +V+LT GTFL G IHIG GR GD S +L Sbjct: 126 SDILIEQDRATGVVTKMGLKFHAKSVILTAGTFLDGKIHIGLENYTGGRAGDPSSITLAQ 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 + RLKTGTP R+D +TI + +Q D +L FSFM + RQI C IT Sbjct: 186 RLRDLNLRVDRLKTGTPPRIDARTIDFSVLAEQHGDAQLPVFSFMGSVDQHPRQIPCFIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL T+ Sbjct: 246 HTNEKTHEVIRNNLDRSPMYTGVIEGIGPRYCPSIEDKVMRFADRNSHQIYLEPEGLTTN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q + ++ GLE II+PGYAIEYDY +P++L TLETK I GL Sbjct: 306 EIYPNGISTSLPFDVQMGIVNSMKGLENARIIKPGYAIEYDYFDPRDLKLTLETKSIQGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAA+QGL+AGIN+ + + R +Y+GV++DDL + G EP Sbjct: 366 FFAGQINGTTGYEEAASQGLLAGINAGLYVQEKEAWFPRRDQAYMGVLVDDLCTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+FTSRAEYR+ LR DNAD RLTPI +LG I E R RF + ++ R L+S+ L Sbjct: 426 YRVFTSRAEYRLLLREDNADIRLTPIAHELGLIDEARWARFNRKMENIEQERQRLRSIWL 485 Query: 484 TSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VIERLQIE 539 ++ + + + + + L P+ + Q L ++ P + IE++QI Sbjct: 486 HPRSEYLEEANQVLGSPLVREASGEDLLRRPEINYQILTALTPFQPPMADKEAIEQVQIA 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y Q E ++ K E IP FDYS + LSNE++ KL +P ++ QAS+I Sbjct: 546 IKYQGYIEHQQEEIEKQKRHENTAIPPHFDYSKVAGLSNEVRIKLEQHRPVSIGQASRIS 605 Query: 600 GMTPAALNLLLIYIKKN 616 G+TPAA++++L+ +KK Sbjct: 606 GITPAAISIILVNLKKQ 622 >gi|260595793|ref|YP_003208364.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cronobacter turicensis z3032] gi|260214970|emb|CBA26596.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Cronobacter turicensis z3032] Length = 629 Score = 562 bits (1448), Expect = e-158, Method: Compositional matrix adjust. Identities = 288/616 (46%), Positives = 393/616 (63%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYKQAVRTALENQPNLMIFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSVPLARR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +TI + ++Q D + FSFM + RQ+ C +T Sbjct: 187 LRELPLRVSRLKTGTPPRIDARTIDFSVLDQQHGDNPMPVFSFMGSADQHPRQVPCYVTH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMKGMENAKIVRPGYAIEYDFFDPRDLKPTLESKYIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+ R S + + R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAGRYSAEKEGWAPGRSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G ++G + + R RF + ++ R L+S +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEAGREMGLVDDARWARFNEKLENIERERQRLRSTWVT 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VIERLQIES 540 S I+ + + + L P+ + L ++ A + E+++I+ Sbjct: 487 PSTASVEEINTVLTAPLSREASGEDLLRRPEMTYAQLTALSVFAPALDDVQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ + E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQQRNESTLLPATLDYRQVNGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 ITPAAISILLVWLKKQ 622 >gi|238765116|ref|ZP_04626050.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Yersinia kristensenii ATCC 33638] gi|238696668|gb|EEP89451.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Yersinia kristensenii ATCC 33638] Length = 629 Score = 562 bits (1448), Expect = e-158, Method: Compositional matrix adjust. Identities = 294/615 (47%), Positives = 396/615 (64%), Gaps = 5/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAMATDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQPVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V + R VVLT GTFL G IHIG GR GD PS SL Sbjct: 127 DLIVENDRVVGAVTKMGLKFRAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPSISLSQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +TI + + Q D + FSF+ + + Q+ C IT Sbjct: 187 LRELPLRVNRLKTGTPPRIDARTIDFSQLAPQLGDTPIPVFSFLGNADQHPEQMACHITY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNSHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ GLE IIRPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMKGLENARIIRPGYAIEYDFFDPRDLKPTLESKYIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+ R +N D R ++Y+GV++DDL++ G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAGRFANDDDGWSPRRDEAYLGVLVDDLSTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL- 483 RMFTSRAEYR+ LR DNAD RLT +G KLG + + R F++ I++ R L+ + + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEMGRKLGLVDDARWAHFSQKIEQIEKERQRLRDIWVH 486 Query: 484 -TSKNLSSTSISFKQD-GKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 S+N++ + K K E L P+ + L ++ + ++++I+ Sbjct: 487 PHSENVAEINALLKAPLSKEANGEELLRRPEIDYRLLTTLPSFGPALTDPQAADQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P D DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYQGYIARQQEEIEKQLRNENTLLPADLDYRQVSGLSNEVIAKLNDHKPNSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKK 615 +TPAA+++LL+++KK Sbjct: 607 ITPAAISILLVWLKK 621 >gi|330964187|gb|EGH64447.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. actinidiae str. M302091] Length = 630 Score = 561 bits (1447), Expect = e-158, Method: Compositional matrix adjust. Identities = 291/618 (47%), Positives = 388/618 (62%), Gaps = 13/618 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VI+IGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIIIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIREILENQPNLWIFQQACD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 127 DLIVEQDQVRGVVTQMGLRILADSVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ K + Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGSKEQHPAQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 247 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R+I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVRSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCTKRESIELEEQRLKSTWVR 486 Query: 485 SKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSI----CPDARKFSSLVIERLQ 537 +IS Y L+ P+ +L ++ C D LV E+++ Sbjct: 487 PGTEQGDAISAHFGTPLTHEYNLLNLLTRPEIDYNSLIALTGQGCTD-----PLVAEQVE 541 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I++ YA Y RQ E ++ E +P+D DY+ + LS E++ KL I +P L QAS+ Sbjct: 542 IKTKYAGYIDRQQDEIARLRASEDTRLPEDIDYTGISGLSKEIQSKLGITRPETLGQASR 601 Query: 598 IEGMTPAALNLLLIYIKK 615 I G+TPAA++LL+I++KK Sbjct: 602 IPGVTPAAISLLMIHLKK 619 >gi|330881914|gb|EGH16063.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. glycinea str. race 4] Length = 630 Score = 561 bits (1447), Expect = e-158, Method: Compositional matrix adjust. Identities = 291/620 (46%), Positives = 394/620 (63%), Gaps = 17/620 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIRETLENQPNLWIFQQACD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 127 DLIVEQDQVRGVVTQMGMRIFADSVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ +K + Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGNKEQHPPQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 247 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +++I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVQSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCTKRESIELEEQRLKSTWVR 486 Query: 485 SKNLSSTSISFKQDGKTRTAYEF-----LSYPDFSIQNLFSI----CPDARKFSSLVIER 535 +I+ + T +E+ L+ P+ +L +I C D + V E+ Sbjct: 487 PGTAQGDAIA--EHFGTPLTHEYNLLNLLTRPEIDYASLIAITGQGCTDPQ-----VAEQ 539 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I++ YA Y RQ E ++ E +P+D DY+++ LS E++ KL I +P L QA Sbjct: 540 VEIKTKYAGYIDRQQDEIARLRASEDTRLPEDIDYAAISGLSKEIQSKLGITRPETLGQA 599 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G+TPAA++LL+I++KK Sbjct: 600 SRIPGVTPAAISLLMIHLKK 619 >gi|261823729|ref|YP_003261835.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pectobacterium wasabiae WPP163] gi|261607742|gb|ACX90228.1| glucose inhibited division protein A [Pectobacterium wasabiae WPP163] Length = 629 Score = 561 bits (1447), Expect = e-158, Method: Compositional matrix adjust. Identities = 290/619 (46%), Positives = 393/619 (63%), Gaps = 13/619 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA+ Sbjct: 7 FDVIVIGGGHAGTEAAMASARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAM 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM R D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMARAVDQAGIQFRILNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLTIFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLARR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +TI + +Q D + FSF+ + + Q+ C IT Sbjct: 187 LRELPLRVNRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFLGNASQHPAQMPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNTHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE K + GLF Sbjct: 307 IYPNGISTSLPFDVQWQIVRSMAGMENARIVRPGYAIEYDFFDPRDLKPTLENKHVHGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQG++AG+N+AR + + R +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGMLAGLNAARLAADKEGWSPRRDQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R L+ + + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEMGRELGMVDDERWARFNEKLENIEKERQRLRDIHVH 486 Query: 485 SK--------NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 + +L T +S + +G+ + Y + LFS + + E++ Sbjct: 487 PQSEQLDQINSLLKTPLSREANGEELLRRPEVDYLQLTALPLFSPGLADEQAA----EQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y Y RQ E ++ E L+P D DY + LSNE+ KL+ KP ++ QAS Sbjct: 543 EIQVKYEGYIARQQDEIEKQLRNENALLPADLDYKQVNGLSNEVIAKLNDHKPSSIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKK 615 +I G+TPAA+++LLI++KK Sbjct: 603 RISGITPAAISILLIWLKK 621 >gi|255020230|ref|ZP_05292299.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Acidithiobacillus caldus ATCC 51756] gi|254970372|gb|EET27865.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Acidithiobacillus caldus ATCC 51756] Length = 624 Score = 561 bits (1447), Expect = e-158, Method: Compositional matrix adjust. Identities = 302/621 (48%), Positives = 410/621 (66%), Gaps = 3/621 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + + YD+IV+GGGHAG EAAA A+LGAST L+T TIG MSCNPAIGG+GKGHLV+E Sbjct: 1 MAQQYDLIVVGGGHAGVEAAAAGARLGASTLLLTQNLDTIGQMSCNPAIGGIGKGHLVKE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDALDGLMGR DAAGIQFR LN +KGPAV+ R QADR YR A+++ + + L + Q Sbjct: 61 IDALDGLMGRAIDAAGIQFRTLNRRKGPAVQATRAQADRVRYRQAIRQLLEALPQLHLFQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G VA ++ + +++ I VVLTTGTFL G I+IG + AGR GD P+N+ Sbjct: 121 GTVADLLLRGGRVAGVQLENGIEIGAGAVVLTTGTFLGGQIYIGDRRTAAGRAGDPPANA 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L +F GRLKTGTP R+DG++I + E Q D PFSF+ ++ Q+ C Sbjct: 181 LAQRLRAMEFPVGRLKTGTPPRIDGRSIDYRHLEPQPGDTPPRPFSFLNRRVVLGQLPCY 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT TN TH +I N++ SA++ G I++ GPRYCPSIEDKIVRF ++ HQIFLEPEGL+ Sbjct: 241 ITHTNRRTHEVIAANLQRSALFGGFIQATGPRYCPSIEDKIVRFADKESHQIFLEPEGLD 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T VYPNGIST+LP +Q + + TIPGLE ++RPGYAIEYDY++P++L +L+++++ Sbjct: 301 TQEVYPNGISTSLPFAVQEELVHTIPGLEAAILLRPGYAIEYDYLDPRDLDHSLQSRRLP 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQINGTTGYEEAAAQGL+AGIN+ R + C +R ++Y+GV++DDL S+GV Sbjct: 361 GLFCAGQINGTTGYEEAAAQGLLAGINAVRSLRGEETWCPARHEAYMGVLVDDLVSRGVD 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+ LR DNAD RLTPIG LG +G+ R + F + + R L L Sbjct: 421 EPYRMFTSRAEYRLQLREDNADRRLTPIGRGLGLVGDERWRHFEEKQAQLERERERLAGL 480 Query: 482 VLTSKNLSSTSISFKQD-GKTR--TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 + + + G+ R +A E L P++ + + + V E L+I Sbjct: 481 RVRLDAQMAQGVGMDTSAGEPRDLSALELLRRPEWDYAAVVRLVGGEGDLPAAVAEHLEI 540 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E+ YA Y RQ E + IP+D DY L +LS E++++L +P + +AS+I Sbjct: 541 ETKYAGYIQRQAEEIERAARWAHASIPEDLDYGHLHSLSFEVRQRLQRQRPRTVGEASRI 600 Query: 599 EGMTPAALNLLLIYIKKNTVK 619 G+TPAA++LLLI++K+ ++ Sbjct: 601 PGVTPAAISLLLIHVKRRQLQ 621 >gi|66048356|ref|YP_238197.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. syringae B728a] gi|63259063|gb|AAY40159.1| Glucose-inhibited division protein A subfamily [Pseudomonas syringae pv. syringae B728a] gi|330970319|gb|EGH70385.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. aceris str. M302273PT] Length = 630 Score = 561 bits (1447), Expect = e-158, Method: Compositional matrix adjust. Identities = 291/618 (47%), Positives = 390/618 (63%), Gaps = 13/618 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIRETLENQPNLWIFQQACD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 +++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 127 DLIVDQDQVRGVVTQMGMRIFADSVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ +K + Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGNKEQHPPQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 247 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R+I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVRSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCIKRESIELEEQRLKSTWVR 486 Query: 485 SKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSI----CPDARKFSSLVIERLQ 537 +I+ Y L+ P+ +L SI C D + V E+++ Sbjct: 487 PGTEQGDAIAAHFGTPLTHEYNLLNLLTRPEIDYASLISITGQGCTDPQ-----VAEQVE 541 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I++ YA Y RQ E ++ E +P+D DY+++ LS E++ KL I +P L QAS+ Sbjct: 542 IKTKYAGYIDRQQDEIARLRASEDTRLPEDIDYAAISGLSKEIQSKLGITRPETLGQASR 601 Query: 598 IEGMTPAALNLLLIYIKK 615 I G+TPAA++LL+I++KK Sbjct: 602 IPGVTPAAISLLMIHLKK 619 >gi|330898614|gb|EGH30033.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. japonica str. M301072PT] Length = 630 Score = 561 bits (1447), Expect = e-158, Method: Compositional matrix adjust. Identities = 292/618 (47%), Positives = 390/618 (63%), Gaps = 13/618 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIRETLENQPNLWIFQQACD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 127 DLIVEQDQVRGVVTQMGMRIFAESVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ +K + Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGNKEQHPPQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 247 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +++I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVQSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A +S D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGTNAALRSQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCTKRESIELEEQRLKSTWVR 486 Query: 485 SKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSI----CPDARKFSSLVIERLQ 537 +I+ Y L+ P+ +L SI C D + V E+++ Sbjct: 487 PGTEQGDAIAAHFGTPLTHEYNLLNLLTRPEIDYASLISITGQGCIDPQ-----VAEQVE 541 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I++ YA Y RQ E ++ E +P+D DY+++ LS E++ KL I +P L QAS+ Sbjct: 542 IKTKYAGYIDRQQDEIARLRASEDTGLPEDIDYAAISGLSKEIQSKLGITRPQTLGQASR 601 Query: 598 IEGMTPAALNLLLIYIKK 615 I G+TPAA++LL+I++KK Sbjct: 602 IPGVTPAAISLLMIHLKK 619 >gi|149375653|ref|ZP_01893422.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Marinobacter algicola DG893] gi|149360055|gb|EDM48510.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Marinobacter algicola DG893] Length = 628 Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust. Identities = 291/615 (47%), Positives = 405/615 (65%), Gaps = 7/615 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G+ T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FDVIVIGGGHAGTEAALAAARMGSQTLLLTHNIETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREIL-SQENLDVIQGEV 124 G M D AGIQFRVLN +KGPAVR R QADR LY+ A+ REIL +Q NL + Q Sbjct: 67 GGAMAMATDKAGIQFRVLNSRKGPAVRATRAQADRVLYKAAI-REILENQPNLTLFQQAA 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + I+ +V Q R TVVLTTGTFL GVIHIG + GR GD+P+N+L Sbjct: 126 DDLIVDGERITGVVTQSGIRFRAPTVVLTTGTFLGGVIHIGMQQHSGGRAGDAPANALAQ 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 + F+ GRLKTGTP R+D +++ + ++Q+ D+ SF+ + + Q+ C +T Sbjct: 186 RLRELPFNVGRLKTGTPPRIDARSVDFSVMQEQWGDDPAPVMSFLGSRNQHPEQVCCYVT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 RT +TH II S +++G+I+ GPRYCPSIEDK+ RF +++ HQIF+EPEGL T+ Sbjct: 246 RTTEQTHDIIRSGFDRSPMFAGNIEGIGPRYCPSIEDKVNRFADKDSHQIFVEPEGLTTN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP +IQ +RTIPG E +I RPGYAIEYD++NP++L TLETK I GL Sbjct: 306 ELYPNGISTSLPFDIQLAAVRTIPGFENAHITRPGYAIEYDFLNPQDLRHTLETKFIQGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGTTGYEEA AQGL+AGIN+A ++ D R ++Y+GV++DDL + G EP Sbjct: 366 YFAGQINGTTGYEEAGAQGLLAGINAALRAQDKDEWYPRRDEAYLGVLVDDLITMGTSEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT G KLG + ++R + F + R L++ + Sbjct: 426 YRMFTSRAEYRLILREDNADLRLTETGHKLGLVDDQRWQAFNSKREAIGAERQRLETTRI 485 Query: 484 ---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 TS ++ S + + +T E L P+ + +++ + + V ++++IE Sbjct: 486 HPGTSGGDAANSHLRQPMNRDQTLAELLRRPEINYRHIADMA-EGHADDPAVADQVEIEI 544 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E + ++ E +P D D+ ++ LSNE+K+KL ++P + QAS+I+G Sbjct: 545 KYEGYISRQADEIERLRRNENTRLPDDIDFDAIGGLSNEIKQKLKEVRPETVAQASRIQG 604 Query: 601 MTPAALNLLLIYIKK 615 +TPAA++ +L+++KK Sbjct: 605 VTPAAISQVLVHLKK 619 >gi|290511657|ref|ZP_06551025.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Klebsiella sp. 1_1_55] gi|289775447|gb|EFD83447.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Klebsiella sp. 1_1_55] Length = 629 Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust. Identities = 290/616 (47%), Positives = 392/616 (63%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMATAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +TI + +Q D + FSFM + RQ+ C IT Sbjct: 187 LRELPLRVSRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGSVDQHPRQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENARIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + + R +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARFSAEKEGWAPRRDQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R R+ + ++ R LKS + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEQGRELGLVDDERWARYNEKLESIERERQRLKSTWVN 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 + S+ ++ + + + L P+ + + L + P A E+++I+ Sbjct: 487 PQAESAAEVNAHLTAPLSREASGEDLLRRPEMTYEQLIQLSPFAPGLEDQQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ + E ++P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQQRNENTVLPATLDYRQVTGLSNEVIAKLNDHKPSSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 ITPAAISILLVWLKKQ 622 >gi|16762452|ref|NP_458069.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29143940|ref|NP_807282.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213052661|ref|ZP_03345539.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213427461|ref|ZP_03360211.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213649867|ref|ZP_03379920.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|21263667|sp|Q8Z2Q7|MNMG_SALTI RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|25300013|pir||AE0953 glucose inhibited division protein [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16504757|emb|CAD03121.1| glucose inhibited division protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29139576|gb|AAO71142.1| glucose inhibited division protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 629 Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust. Identities = 290/616 (47%), Positives = 393/616 (63%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNP IGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPTIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQF++LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFKILNASKGPAVRATRAQADRVLYRQAVRIALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVSRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNAFQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIHGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEMGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 S+ ++ + + + L P+ + L S+ A E+++I+ Sbjct: 487 PSAESADEVNAHLTTPLSREASGEDLLRRPEMTYAQLTSLAAFAPALEDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKKQ 622 >gi|292493915|ref|YP_003529354.1| glucose inhibited division protein A [Nitrosococcus halophilus Nc4] gi|291582510|gb|ADE16967.1| glucose inhibited division protein A [Nitrosococcus halophilus Nc4] Length = 629 Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust. Identities = 288/618 (46%), Positives = 388/618 (62%), Gaps = 4/618 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 Y+VIV+GGGHAG EAA AA+ GA T L+TH T+G MSCNPAIGG+GKGHLV+EIDA Sbjct: 6 QYEVIVVGGGHAGTEAALAAARQGARTLLLTHNLETLGQMSCNPAIGGIGKGHLVKEIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLM + AD AGI FRVLN +KGPAVR R QADR LY+ +++ + Q +L + Q V Sbjct: 66 LGGLMAQAADRAGIHFRVLNARKGPAVRATRAQADRALYKAVVRKSLEQQPHLSLFQQAV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 A E + + Q V+LT GTFL G IH+G GR GD P+N+L Sbjct: 126 ADLLVEGERVIGVKTQLGLTFYAPAVILTVGTFLGGRIHVGLTHHEGGRAGDPPANALAC 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQIECGIT 243 + F RLKTGTP R+DG++I + + E Q D+ + FSF+ + + Q+ C IT Sbjct: 186 RLRELPFRVARLKTGTPPRIDGRSIDYSQLEVQPGDKPVPVFSFLGSAQDHPSQVHCHIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 RT +TH II N+ S +YSG+I+ GPRYCPSIEDK+VRF ++ HQIF+EPEGL T Sbjct: 246 RTTPQTHEIIHANLDRSPMYSGEIEGMGPRYCPSIEDKVVRFSDKESHQIFIEPEGLETF 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNGIST+LP ++Q +R+IPG E+ +I RPGYAIEYD+ +P++L P+LET + GL Sbjct: 306 EVYPNGISTSLPFDVQEALVRSIPGFEQAHITRPGYAIEYDFFDPRDLKPSLETSFLQGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGTTGYEEA AQGL+AG+N+ + C R ++Y+GV+IDDL + G EP Sbjct: 366 YFAGQINGTTGYEEAGAQGLIAGLNAGLQIRDQAPWCPRRDEAYVGVLIDDLITCGTSEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLTP G LG + E R ++F + L + Sbjct: 426 YRMFTSRAEYRLLLREDNADLRLTPKGQALGVVDETRWRQFNAKWEAIERENQRLSQQRI 485 Query: 484 TSKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 ++ + R Y E L P S + L + + +V E++ I++ Sbjct: 486 GPDQVAQEEATTLLGEPLRREYRLIELLRRPQISYEKLMRLIGEPVAVDLVVAEQIAIQA 545 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 YA Y RQ E + E +P D +Y + LS E++EKL+ ++P L QA++I G Sbjct: 546 KYAGYIERQQQEINRQQRHEGLRLPLDLNYHQVKGLSAEVQEKLARVRPATLGQAARIPG 605 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA++LLL+Y+K+ V Sbjct: 606 VTPAAVSLLLVYLKRARV 623 >gi|307246580|ref|ZP_07528651.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306852452|gb|EFM84686.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 630 Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust. Identities = 300/617 (48%), Positives = 389/617 (63%), Gaps = 7/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA+ Sbjct: 7 YDVIVVGGGHAGTEAALAPARMGLKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAM 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD Q EV Sbjct: 67 GGLMAIAIDQAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDTFQQEVV 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E N V + + +VVLT GTFL G IHIG GR GD + L + Sbjct: 127 DILVENNRAVGAVTKMGLTFKARSVVLTAGTFLAGKIHIGLDNYAGGRAGDPAATMLADR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQIECGITR 244 + RLKTGTP RLD +TI +D KQ D L SFM + + RQI C IT Sbjct: 187 LRDLNLRVDRLKTGTPPRLDARTINFDVLAKQHGDAELPVMSFMGSVDLHPRQIPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I ++ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL+T Sbjct: 247 TNEQTHDLIRNSLDRSPMYTGVIEGIGPRYCPSIEDKVMRFSDRNSHQIYLEPEGLSTIE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LP ++Q + ++ GLEK II+PGYAIEYDY +P++L PTLETK I GLF Sbjct: 307 VYPNGISTSLPFDVQMGIVNSMKGLEKTRIIKPGYAIEYDYFDPRDLKPTLETKAIEGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AGIN+A + + +R +Y GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGINAALQVQGKEAWFPTRDLAYTGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL- 483 R+FTSRAEYR+ LR DNAD RLTPI +LG I + R RF + ++ R LK + + Sbjct: 427 RVFTSRAEYRLLLREDNADIRLTPIAHELGLIDDARWARFNQKMENIERERERLKQIWIH 486 Query: 484 -TSKNLSSTSISFKQDGKTRTAY--EFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIE 539 S++L+ + TR A + L P+ + L + A E+++I Sbjct: 487 PQSEHLAVVN-ELVNSPLTREASGEDLLRRPEVTYDKLTQVAAFAPALDDKQAAEQVEIS 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y Q E + K E LIP +FDY + +LSNE++ KL +P ++ QAS+I Sbjct: 546 IKYQGYIEHQQNEIERHKRHENTLIPAEFDYDKVESLSNEVRAKLMQHRPVSIGQASRIS 605 Query: 600 GMTPAALNLLLIYIKKN 616 G+TPAA+++LL+ +KK Sbjct: 606 GITPAAISILLVNLKKQ 622 >gi|238753970|ref|ZP_04615329.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Yersinia ruckeri ATCC 29473] gi|238707722|gb|EEQ00081.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Yersinia ruckeri ATCC 29473] Length = 629 Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust. Identities = 293/616 (47%), Positives = 395/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAIATDHAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQPVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS SL Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPSISLSQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +TI + + Q D+ + FSF+ + + Q+ C IT Sbjct: 187 LRELPLRVNRLKTGTPPRIDARTIDFSQLAPQLGDDPVPVFSFLGNASQHPEQMACHITY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E IIRPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMKGMENARIIRPGYAIEYDFFDPRDLKPTLESKYIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+ R +N + R ++Y+GV++DDL++ G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAGRFANDDEGWFPRRDEAYLGVLVDDLSTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL- 483 RMFTSRAEYR+ LR DNAD RLT +G KLG + + R ++ I++ R L+ +++ Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEMGRKLGLVDDARWAHYSLKIEQIEKERQRLRDIMVH 486 Query: 484 -TSKNLSSTSISFKQD-GKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 S+ + + K K E L P+ + L ++ S ++++I+ Sbjct: 487 PNSEKIQEINALLKAPLSKEANGEELLRRPEIDYRMLTALDKFGPALSDPQAADQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E + E L+P D DYS + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQEEIERQLRNENTLLPTDLDYSQVSGLSNEVTAKLNDHKPSSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKKQ 622 >gi|317050169|ref|YP_004117817.1| glucose inhibited division protein A [Pantoea sp. At-9b] gi|316951786|gb|ADU71261.1| glucose inhibited division protein A [Pantoea sp. At-9b] Length = 629 Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust. Identities = 297/616 (48%), Positives = 392/616 (63%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G T L+TH +G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIVIGGGHAGTEAAMAAARMGQQTLLLTHDIDKLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMATAIDKAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R TVVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKTVVLTVGTFLDGKIHIGMDNYSGGRAGDPPSIPLSKR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 GRLKTGTP R+D +TI + + Q D + FSFM + + +Q+ C IT Sbjct: 187 LRALPLRVGRLKTGTPPRIDARTIDFSQLAPQHGDNPMPVFSFMGNVSQHPQQVPCWITY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEQTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ GLE I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMKGLENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR+S + R +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARQSADKEGWAPRRDQAYMGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL- 483 RMFTSRAEYR+ LR DNAD RLT G ++G + + R R+ + ++ R L+ L + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEAGREMGLVDDARWARYNQKLEAIEQERQRLRDLWVH 486 Query: 484 -TSKNLSST-SISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 S+N+ SI K + + L P+ + L S+ + E+++I+ Sbjct: 487 PKSENVDEVNSILSAPLTKEASGEDLLRRPEMTYALLTSLNSYGPVLADEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E + E L+P D DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQEEIDRQQRNENTLLPVDLDYRQVSGLSNEVIAKLNDHKPSSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LLIY+KK Sbjct: 607 ITPAAISILLIYLKKQ 622 >gi|38257761|sp|Q9F5X1|MNMG_PSEU2 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|10764670|gb|AAG22815.1|AF302083_1 GidA [Pseudomonas syringae pv. syringae] Length = 631 Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust. Identities = 291/618 (47%), Positives = 390/618 (63%), Gaps = 13/618 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 8 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 68 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIRETLENQPNLWIFQQACD 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 +++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 128 DLIVDQDQVRGVVTQMGMRIFADSVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAQR 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ +K + Q+ C IT Sbjct: 188 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGNKEQHPPQVSCWITH 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 248 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R+I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 308 LYPNGISTSLPFDVQLQIVRSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 368 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 428 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCIKRESIELEEQRLKSTWVR 487 Query: 485 SKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSI----CPDARKFSSLVIERLQ 537 +I+ Y L+ P+ +L SI C D + V E+++ Sbjct: 488 PGTEQGDAIAAHFGTPLTHEYNLLNLLTRPEIDYASLISITGQGCTDPQ-----VAEQVE 542 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I++ YA Y RQ E ++ E +P+D DY+++ LS E++ KL I +P L QAS+ Sbjct: 543 IKTKYAGYIDRQQDEIARLRASEDTRLPEDIDYAAISGLSKEIQSKLGITRPETLGQASR 602 Query: 598 IEGMTPAALNLLLIYIKK 615 I G+TPAA++LL+I++KK Sbjct: 603 IPGVTPAAISLLMIHLKK 620 >gi|238759548|ref|ZP_04620710.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Yersinia aldovae ATCC 35236] gi|238702207|gb|EEP94762.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Yersinia aldovae ATCC 35236] Length = 629 Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust. Identities = 295/615 (47%), Positives = 395/615 (64%), Gaps = 5/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAMATDQAGIQFRILNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQPVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS SL Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPSISLSQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +TI + + Q D + FSF+ + + Q+ C IT Sbjct: 187 LRELPLRVNRLKTGTPPRIDARTIDFSQLAPQLGDTPIPVFSFLGNASQHPEQMACHITY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNSHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ GLE IIRPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMKGLENARIIRPGYAIEYDFFDPRDLKPTLESKYIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+ R +N D R ++Y+GV++DDL++ G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAGRFANDEDGWSPRRDEAYLGVLVDDLSTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT +G KLG + + R F++ I++ R L+ + + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEMGRKLGLVNDARWAHFSQKIEKIEKERQRLRDIWVH 486 Query: 485 --SKNLSSTSISFKQD-GKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 S N+S + K K E L P+ + L ++ + ++++I+ Sbjct: 487 PYSDNVSEINALLKAPLSKEANGEELLRRPEIDYRLLTTLPSFGPALTDPQAADQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E ++P D DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYITRQQEEIEKQLRNENTVLPLDLDYRQVSGLSNEVIAKLNDHKPNSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKK 615 +TPAA+++LL+++KK Sbjct: 607 ITPAAISILLVWLKK 621 >gi|319790744|ref|YP_004152384.1| glucose inhibited division protein a [Variovorax paradoxus EPS] gi|315593207|gb|ADU34273.1| glucose inhibited division protein A [Variovorax paradoxus EPS] Length = 652 Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust. Identities = 300/630 (47%), Positives = 395/630 (62%), Gaps = 18/630 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA++GA T L++H T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALAAARMGAKTLLLSHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D AGIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 67 GGAMAIATDEAGIQFRILNSSKGPAVRATRAQADRVLYKAAIRHRLENQPNLSLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R TVVLT GTFL G IH+G AGR GD P+ SL Sbjct: 127 DLMVEGDRVVGAVTQVGIAFRARTVVLTAGTFLDGRIHVGLDNYQAGRAGDPPAISLSAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADER------LIPFSFM-TDKITNRQI 238 + GRLKTGTP RLDG++I + K +Q D + FSFM + RQ+ Sbjct: 187 LKELKLPQGRLKTGTPPRLDGRSIDFSKCTEQPGDGMPGGAGPMPVFSFMGRADMHPRQM 246 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C IT TN TH II S +++G I GPRYCPS+EDKI RF ++ HQIFLEPE Sbjct: 247 ACWITHTNARTHDIIRSGFDRSPMFTGKIDGVGPRYCPSVEDKINRFADKESHQIFLEPE 306 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL T+ YPNGIST+LP +IQ+Q +R++PGLE +I+RPGYAIEYDY +P+EL + ET+ Sbjct: 307 GLTTNEYYPNGISTSLPFDIQYQLVRSMPGLENAHILRPGYAIEYDYFDPRELKSSFETR 366 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 + GLF AGQINGTTGYEEAAAQGL AGIN+A + D R ++Y+GV++DDL +K Sbjct: 367 SVKGLFFAGQINGTTGYEEAAAQGLFAGINAALQCRGEDAWLPRRDEAYLGVLVDDLITK 426 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 GV EPYRMFTSRAE+R+ LR DNAD RLT G KLG + + R F++ + L Sbjct: 427 GVTEPYRMFTSRAEFRLQLREDNADMRLTEAGRKLGLVDDARWDAFSRKRDAVSRETERL 486 Query: 479 KSLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS----- 530 KS+ + +NL S + K + L PD + + L S+ D K+S+ Sbjct: 487 KSIWVNPRNLPAAESERVLGKAIEHEYNLADLLRRPDVNYETLMSL--DGGKYSASSALS 544 Query: 531 -LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 IE+++I + Y+ Y RQ E + E +P DFDY + ALS E+++KL +P Sbjct: 545 ETEIEQIEISAKYSGYIERQHDEVERAAHFENLRLPADFDYGQVKALSFEVRQKLDKHRP 604 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 L AS+I G+TPAA++LL+I+++K K Sbjct: 605 ETLGLASRISGVTPAAISLLMIHLRKGGHK 634 >gi|300115603|ref|YP_003762178.1| glucose inhibited division protein A [Nitrosococcus watsonii C-113] gi|299541540|gb|ADJ29857.1| glucose inhibited division protein A [Nitrosococcus watsonii C-113] Length = 629 Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust. Identities = 296/622 (47%), Positives = 402/622 (64%), Gaps = 12/622 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 Y+VI++GGGHAG EAA AA+ G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA Sbjct: 6 QYEVIIVGGGHAGTEAALAAARQGVRTLLLTHNIETLGQMSCNPAIGGIGKGHLVKEIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLM AD AGI FR+LN +KGPAVR R QADR LY+ +++ + Q L + Q V Sbjct: 66 LGGLMAHAADQAGIHFRMLNARKGPAVRATRVQADRALYKAVVRKALEQQPYLSLFQQAV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + + + Q VVLT GTFL G IH+G GR GD P+N+L + Sbjct: 126 TDLVVKGEQVVGVRTQLGLTFYAPAVVLTVGTFLGGRIHVGLTNHEGGRAGDPPANALSS 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQIECGIT 243 + F RLKTGTP R+DG++I + + E Q D+ + FSF+ + + +Q+ C IT Sbjct: 186 RLRELPFRVARLKTGTPPRIDGRSIDYSQLEVQPGDDPVPVFSFLGSAEDHPQQVSCHIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 RTNL TH II ++ S IYSG+I+ GPRYCPSIEDK+VRF ++ HQIF+EPEGL T Sbjct: 246 RTNLRTHEIIRASLDRSPIYSGEIEGTGPRYCPSIEDKVVRFSDKTSHQIFIEPEGLETF 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q +R+I G E+ +I RPGYAIEYD+ +P++L P+LET + GL Sbjct: 306 EIYPNGISTSLPFDVQVALVRSIQGFEQAHITRPGYAIEYDFFDPRDLKPSLETSFLRGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGTTGYEEAAAQGL+AG+N+ + + R ++YIGV+IDDL + G EP Sbjct: 366 YFAGQINGTTGYEEAAAQGLIAGLNAGLQVQGKEPWYPRRDEAYIGVLIDDLITCGTSEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF---AKYIQEYNFLRSLLKS 480 YRMFTSRAEYR+ LR DNAD RLTPIG +LG + E R +RF K I+ N + L++ Sbjct: 426 YRMFTSRAEYRLLLREDNADLRLTPIGRELGLVDEARWRRFNTKWKAIEREN--QRLVQQ 483 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 + K +I+ + R Y E L P S + L + + V E++ Sbjct: 484 RIEPGKIAEGEAITLLGE-PLRREYRLIELLRRPHISYEKLMRLIGEPMVVEPAVAEQIA 542 Query: 538 IESSYAAYTGRQMIE-AKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 I++ YA Y RQ +E A++ + E RL P DF+Y + LS E++EKL+ ++P L QA+ Sbjct: 543 IQAKYAGYIERQQLEIARQQRHESLRL-PLDFNYYQVRGLSVEVQEKLARVQPVTLGQAA 601 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA++LLL+Y+K+ V Sbjct: 602 RIPGVTPAAISLLLVYLKRARV 623 >gi|331017733|gb|EGH97789.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 630 Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust. Identities = 292/618 (47%), Positives = 387/618 (62%), Gaps = 13/618 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIREILENQPNLWIFQQACD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 127 DLIVEQDQVRGVVTQMGLRILADSVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ K + Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGSKEQHPAQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 247 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R+I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVRSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCTKRESIELEEQRLKSTWVR 486 Query: 485 SKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSI----CPDARKFSSLVIERLQ 537 +IS Y L+ P+ +L ++ C D LV E+++ Sbjct: 487 PGTQQGDAISAHFGTPLTHEYNLLNLLTRPEIDYNSLIALTGQGCAD-----PLVAEQVE 541 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ YA Y RQ E ++ E +P+D DY+ + LS E++ KL I +P L QAS+ Sbjct: 542 IKIKYAGYIDRQQEEIARLRASEDTRLPEDIDYTGISGLSKEIQSKLGITRPETLGQASR 601 Query: 598 IEGMTPAALNLLLIYIKK 615 I G+TPAA++LL+I++KK Sbjct: 602 IPGVTPAAISLLMIHLKK 619 >gi|325929407|ref|ZP_08190535.1| glucose-inhibited division protein A [Xanthomonas perforans 91-118] gi|325540182|gb|EGD11796.1| glucose-inhibited division protein A [Xanthomonas perforans 91-118] Length = 634 Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust. Identities = 289/625 (46%), Positives = 390/625 (62%), Gaps = 20/625 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAG EAA +A+ GA T L+TH T+G+MSCNPAIGG+GKGHLV+EIDAL Sbjct: 8 YDVIVIGGGHAGTEAALASARTGARTLLLTHNIETVGAMSCNPAIGGIGKGHLVKEIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M R AD AGIQ+R LN KGPAVR R QADR LYR A++ + +Q NL V Q V Sbjct: 68 GGAMARAADLAGIQWRTLNASKGPAVRATRCQADRNLYRTAIRCIVEAQPNLTVFQAAVD 127 Query: 126 GF-----NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 +E + + ++ Q + +VVLT GTFL G IH+G+ + AGRMGD P+ Sbjct: 128 DLIIHNGTSEADSVRGVITQTGLRFQAPSVVLTAGTFLAGKIHVGETQYAAGRMGDPPAT 187 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + F RLKTGTP R+DG+T+ + +Q D+ L SFM + RQ+ Sbjct: 188 TLAARLRERPFAIDRLKTGTPPRIDGRTLDYGVMAEQPGDDPLPVMSFMGQVSDHPRQVS 247 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT+T +TH II + S +YSG I+ GPRYCPSIEDK+VRF E+ HQIF+EPEG Sbjct: 248 CWITQTTEQTHEIIRNALHRSPLYSGQIEGIGPRYCPSIEDKVVRFAEKTSHQIFVEPEG 307 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L +YPNGIST+LP ++Q +R+I G +I RPGYAIEYD+ +P+ L +LETK Sbjct: 308 LEVAEIYPNGISTSLPFDVQLALVRSIHGFANAHITRPGYAIEYDFFDPRGLKASLETKT 367 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 + GLF AGQINGTTGYEEAAAQGL+AG+N+AR L R ++Y+GV++DDL + G Sbjct: 368 VGGLFFAGQINGTTGYEEAAAQGLLAGLNAARHVQGLPAWSPRRDEAYLGVLVDDLITHG 427 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +G +G + + R RFA + + L Sbjct: 428 TTEPYRMFTSRAEYRLQLREDNADARLTGVGRAMGLVDDARWARFAAKQEAVQRETTRLS 487 Query: 480 SLVLTSKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLFSI------CPDARKFSS 530 +L T N ++ + + + P+ + L + DA+ Sbjct: 488 ALWATPGNALGREVADALGVTVSRETNVLDLIKRPELTYATLMRVPTLGPGVDDAQ---- 543 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 V E+++I YA Y RQ + + E IP FDY+S+ LS E+++KL ++P Sbjct: 544 -VAEQVEISVKYAGYLDRQRDDIARQQRHETTPIPDGFDYASVRGLSIEVQQKLERVRPQ 602 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 ++ QA +I GMTPAA++LLL+++++ Sbjct: 603 HIGQAQRIPGMTPAAISLLLVHLER 627 >gi|307262144|ref|ZP_07543795.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306868121|gb|EFM99946.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 630 Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust. Identities = 299/617 (48%), Positives = 389/617 (63%), Gaps = 7/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA+ Sbjct: 7 YDVIVVGGGHAGTEAALAPARMGLKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKEIDAM 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q EV Sbjct: 67 GGLMAIAIDQAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIFQQEVV 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E N V + + +VVLT GTFL G IHIG GR GD + L + Sbjct: 127 DILVENNRAVGAVTKMGLTFKARSVVLTAGTFLAGKIHIGLDNYAGGRAGDPAATMLADR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQIECGITR 244 + RLKTGTP RLD +TI +D KQ D L SFM + + RQI C IT Sbjct: 187 LRDLNLRVDRLKTGTPPRLDARTINFDVLAKQHGDAELPVMSFMGSVDLHPRQIPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I ++ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL+T Sbjct: 247 TNEQTHDLIRNSLDRSPMYTGIIEGIGPRYCPSIEDKVMRFSDRNSHQIYLEPEGLSTIE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LP ++Q + ++ GLEK II+PGYAIEYDY +P++L PTLETK I GLF Sbjct: 307 VYPNGISTSLPFDVQMGIVNSMKGLEKTRIIKPGYAIEYDYFDPRDLKPTLETKAIEGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AGIN+A + + +R +Y GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGINAALQVQGKEAWFPTRDLAYTGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL- 483 R+FTSRAEYR+ LR DNAD RLTPI +LG I + R RF + ++ LK + + Sbjct: 427 RVFTSRAEYRLLLREDNADIRLTPIAHELGLIDDARWARFNQKMENIEREHERLKQIWIH 486 Query: 484 -TSKNLSSTSISFKQDGKTRTAY--EFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIE 539 S++L+ + TR A + L P+ + L + A E+++I Sbjct: 487 PQSEHLAVVN-ELVNSPLTREASGEDLLRRPEVTYDKLTQVAAFAPALDDKQAAEQVEIS 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y Q E + K E LIP +FDY + +LSNE++ KL +P ++ QAS+I Sbjct: 546 IKYQGYIEHQQNEIERHKRHENTLIPAEFDYDKVESLSNEVRAKLMQHRPVSIGQASRIS 605 Query: 600 GMTPAALNLLLIYIKKN 616 G+TPAA+++LL+ +KK Sbjct: 606 GITPAAISILLVNLKKQ 622 >gi|289826268|ref|ZP_06545380.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 627 Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust. Identities = 290/615 (47%), Positives = 393/615 (63%), Gaps = 5/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNP IGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPTIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQF++LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFKILNASKGPAVRATRAQADRVLYRQAVRIALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVSRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNAFQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIHGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEMGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 S+ ++ + + + L P+ + L S+ A E+++I+ Sbjct: 487 PSAESADEVNAHLTTPLSREASGEDLLRRPEMTYAQLTSLAAFAPALEDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKK 615 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVWLKK 621 >gi|330890256|gb|EGH22917.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. mori str. 301020] Length = 630 Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust. Identities = 290/620 (46%), Positives = 394/620 (63%), Gaps = 17/620 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIRETLENQPNLWIFQQACD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L + Sbjct: 127 DLIVEQDQVRGVVTQMGMRIFADSVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAHR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ K + Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGSKEQHPPQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 247 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +++I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVQSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCTKRESIELEEQRLKSTWVR 486 Query: 485 SKNLSSTSISFKQDGKTRTAYEF-----LSYPDFSIQNLFSI----CPDARKFSSLVIER 535 +I+ + T +E+ L+ P+ +L ++ C D + V E+ Sbjct: 487 PGTAQGDAIA--EHFGTPLTHEYNLLNLLTRPEIDYASLIALTGQGCTDPQ-----VAEQ 539 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I++ YA Y RQ E ++ E +P+D DY+++ LS E++ KL I +P L QA Sbjct: 540 VEIKTKYAGYIDRQQDEIARLRASEDTRLPEDIDYAAISGLSKEIQSKLGITRPETLGQA 599 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G+TPAA++LL+I++KK Sbjct: 600 SRIPGVTPAAISLLMIHLKK 619 >gi|289628220|ref|ZP_06461174.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|330870069|gb|EGH04778.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 630 Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust. Identities = 290/620 (46%), Positives = 393/620 (63%), Gaps = 17/620 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIRETLENQPNLWIFQQACD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 127 DLIVEQDQVRGVVTQMGMRIFADSVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ K + Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGSKEQHPPQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 247 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +++I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVQSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCTKRESIELEEQRLKSTWVR 486 Query: 485 SKNLSSTSISFKQDGKTRTAYEF-----LSYPDFSIQNLFSI----CPDARKFSSLVIER 535 +I+ + T +E+ L+ P+ +L ++ C D + V E+ Sbjct: 487 PGTAQGDAIA--EHFGTPLTHEYNLLNLLTRPEIDYASLIALTGQGCTDPQ-----VAEQ 539 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I++ YA Y RQ E ++ E +P+D DY+++ LS E++ KL I +P L QA Sbjct: 540 VEIKTKYAGYIDRQQDEIARLRASEDTRLPEDIDYAAISGLSKEIQSKLGITRPETLGQA 599 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G+TPAA++LL+I++KK Sbjct: 600 SRIPGVTPAAISLLMIHLKK 619 >gi|289649110|ref|ZP_06480453.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. aesculi str. 2250] Length = 631 Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust. Identities = 290/620 (46%), Positives = 393/620 (63%), Gaps = 17/620 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 8 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 68 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIRETLENQPNLWIFQQACD 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 128 DLIVEQDQVRGVVTQMGMRIFADSVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAQR 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ K + Q+ C IT Sbjct: 188 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGSKEQHPPQVSCWITH 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 248 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +++I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 308 LYPNGISTSLPFDVQLQIVQSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 368 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 428 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCTKRESIELEEQRLKSTWVR 487 Query: 485 SKNLSSTSISFKQDGKTRTAYEF-----LSYPDFSIQNLFSI----CPDARKFSSLVIER 535 +I+ + T +E+ L+ P+ +L ++ C D + V E+ Sbjct: 488 PGTAQGDAIA--EHFGTPLTHEYNLLNLLTRPEIDYASLIALTGQGCTDPQ-----VAEQ 540 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I++ YA Y RQ E ++ E +P+D DY+++ LS E++ KL I +P L QA Sbjct: 541 VEIKTKYAGYIDRQQDEIARLRASEDTRLPEDIDYAAISGLSKEIQSKLGITRPETLGQA 600 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G+TPAA++LL+I++KK Sbjct: 601 SRIPGVTPAAISLLMIHLKK 620 >gi|332995871|gb|AEF05926.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Alteromonas sp. SN2] Length = 633 Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust. Identities = 290/618 (46%), Positives = 400/618 (64%), Gaps = 5/618 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 +++DVIV+GGGHAG EAA AA++G++T L+TH TIG MSCNPAIGG+GKGHLV+EID Sbjct: 5 QAFDVIVVGGGHAGTEAALAAARMGSNTLLLTHNIETIGQMSCNPAIGGIGKGHLVKEID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G MG AD GIQFR LN KGPAVR R QADR LYR A+++ + SQENL + Q Sbjct: 65 ALGGAMGLAADQGGIQFRTLNSSKGPAVRATRAQADRTLYRQAIRKIVESQENLTLFQQS 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + ++ +V Q + TVVLT GTFL G IHIG GR GD PS +L Sbjct: 125 VDDLVVENDQVTGVVTQMGLKFKAKTVVLTVGTFLGGTIHIGLENYRGGRAGDPPSIALA 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK-ITNRQIECGI 242 + F RLKTGTPARLD +++ + + Q D FSFM ++ + +QI C I Sbjct: 185 DRLRALPFRVDRLKTGTPARLDARSLDFSVMQAQPGDNPTPVFSFMGNREMHPQQIPCYI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II + S +++G I+ GPRYCPSIEDKI RF +++ HQIF+EPEGLN+ Sbjct: 245 THTNEKTHDIIRGGLDRSPMFTGVIEGIGPRYCPSIEDKITRFADKDSHQIFVEPEGLNS 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 VYPNGIST+LP +IQ +R+I G E +I+RPGYAIEYD+ +P++L TLE K I G Sbjct: 305 IEVYPNGISTSLPFDIQMNLVRSIKGFENAHIVRPGYAIEYDFFDPRDLKQTLENKFIKG 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEA AQGL+AG N++ ++ + D + R +Y+GV+IDDL + G E Sbjct: 365 LFFAGQINGTTGYEEAGAQGLIAGANASLQAQEKDPLILRRDQAYMGVLIDDLATMGTKE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD+RLT +G ++G + + R F ++ L+ Sbjct: 425 PYRMFTSRAEYRLLLREDNADSRLTALGREIGLVDDARWAAFNTKMEAVEGELQRLRGQW 484 Query: 483 LTSKNLSSTSISF---KQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQI 538 + + ++ +++ K + E + P+ + + L I + + E+++I Sbjct: 485 VHKDHGATPALNTLLKTPVSKEHSLEELIRRPEMTYRQLMDIESIGPGLADPIAAEQVEI 544 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + YA Y RQM E + + E L+P D D++ + LSNE+ KL+ +P + +AS+I Sbjct: 545 QIKYAGYIARQMDEIAKTQRHENSLLPVDLDFTKISGLSNEVVAKLTEARPETIGKASRI 604 Query: 599 EGMTPAALNLLLIYIKKN 616 G+TPAA++LLL+Y+KK+ Sbjct: 605 SGITPAAISLLLVYLKKH 622 >gi|317494634|ref|ZP_07953046.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917236|gb|EFV38583.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterobacteriaceae bacterium 9_2_54FAA] Length = 629 Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust. Identities = 289/615 (46%), Positives = 389/615 (63%), Gaps = 5/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMASARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM D GIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMATAIDHGGIQFRILNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD P+ +L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPAIALSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +TI + Q+ D FSFM + + Q+ C IT Sbjct: 187 LRELPLRVNRLKTGTPPRIDARTIDFSVLAPQYGDNPSPVFSFMGNASQHPEQMPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNERTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMEGMENARIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+ R +N+ + R +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAGRFANEDEGWSPRRDQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL- 483 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R F + ++ R L+ + + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTAIGRELGLVDDVRWTHFNQKLENIERERQRLREIWVH 486 Query: 484 -TSKNLSSTSISFKQD-GKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 S+ ++ + K + + L P+ L + P A E+++I+ Sbjct: 487 PNSEQVAELNTLLKAPLSREANGEDLLRRPEIDYTKLTQLAPFAPALDDEKAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P D DYS + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQEEIEKHLRNENTLLPADLDYSLVSGLSNEVIAKLNDHKPSSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKK 615 +TPAA+++LLI++KK Sbjct: 607 ITPAAISILLIWLKK 621 >gi|330976396|gb|EGH76453.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 630 Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust. Identities = 291/618 (47%), Positives = 390/618 (63%), Gaps = 13/618 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIRETLENQPNLWIFQQACD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 127 DLIVEQDQVRGVVTQMGMRIFAESVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ +K + Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGNKEQHPPQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 247 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +++I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVQSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCTKRESIELEEQRLKSTWVR 486 Query: 485 SKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSI----CPDARKFSSLVIERLQ 537 +I+ Y L+ P+ +L SI C D + V E+++ Sbjct: 487 PGTEQGDAIAAHFGTPLTHEYNLLNLLTRPEIDYASLISITGQGCIDPQ-----VAEQVE 541 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I++ YA Y RQ E ++ E +P+D DY+++ LS E++ KL I +P L QAS+ Sbjct: 542 IKTKYAGYIDRQQDEIARLRASEDTGLPEDIDYAAISGLSKEIQSKLGITRPQTLGQASR 601 Query: 598 IEGMTPAALNLLLIYIKK 615 I G+TPAA++LL+I++KK Sbjct: 602 IPGVTPAAISLLMIHLKK 619 >gi|307257737|ref|ZP_07539494.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306863643|gb|EFM95569.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 630 Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust. Identities = 299/617 (48%), Positives = 389/617 (63%), Gaps = 7/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA+ Sbjct: 7 YDVIVVGGGHAGTEAALAPARMGLKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKEIDAM 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q EV Sbjct: 67 GGLMAIAIDQAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIFQQEVV 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E N V + + +VVLT GTFL G IHIG GR GD + L + Sbjct: 127 DILVENNRAVGAVTKMGLTFKARSVVLTAGTFLAGKIHIGLDNYAGGRAGDPAATMLADR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQIECGITR 244 + RLKTGTP RLD +TI +D KQ D L SFM + + RQI C IT Sbjct: 187 LRDLNLRIDRLKTGTPPRLDARTINFDVLAKQHGDAELPVMSFMGSVDLHPRQIPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I ++ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL+T Sbjct: 247 TNEQTHDLIRNSLDRSPMYTGVIEGIGPRYCPSIEDKVMRFSDRNSHQIYLEPEGLSTIE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LP ++Q + ++ GLEK II+PGYAIEYDY +P++L PTLETK I GLF Sbjct: 307 VYPNGISTSLPFDVQMGIVNSMKGLEKTRIIKPGYAIEYDYFDPRDLKPTLETKAIEGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AGIN+A + + +R +Y GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGINAALQVQGKEAWFPTRDLAYTGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL- 483 R+FTSRAEYR+ LR DNAD RLTPI +LG I + R RF + ++ LK + + Sbjct: 427 RVFTSRAEYRLLLREDNADIRLTPIAHELGLIDDARWARFNQKMENIEREHERLKQIWIH 486 Query: 484 -TSKNLSSTSISFKQDGKTRTAY--EFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIE 539 S++L+ + TR A + L P+ + L + A E+++I Sbjct: 487 PQSEHLAVVN-ELVNSPLTREASGEDLLRRPEVTYDKLTQVAAFAPALDDKQAAEQVEIS 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y Q E + K E LIP +FDY + +LSNE++ KL +P ++ QAS+I Sbjct: 546 IKYQGYIEHQQNEIERHKRHENTLIPAEFDYDKVESLSNEVRAKLMQHRPVSIGQASRIS 605 Query: 600 GMTPAALNLLLIYIKKN 616 G+TPAA+++LL+ +KK Sbjct: 606 GITPAAISILLVNLKKQ 622 >gi|330937306|gb|EGH41314.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. pisi str. 1704B] Length = 630 Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust. Identities = 291/618 (47%), Positives = 390/618 (63%), Gaps = 13/618 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIRETLENQPNLWIFQQACD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 127 DLIVEQDQVRGVVTQMGMRIFAESVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ +K + Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGNKEQHPPQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 247 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +++I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVQSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDIWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCTKRESIELEEQRLKSTWVR 486 Query: 485 SKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSI----CPDARKFSSLVIERLQ 537 +I+ Y L+ P+ +L SI C D + V E+++ Sbjct: 487 PGTEQGDAIAAHFGTPLTHEYNLLNLLTRPEIDYASLISITGQGCIDPQ-----VAEQVE 541 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I++ YA Y RQ E ++ E +P+D DY+++ LS E++ KL I +P L QAS+ Sbjct: 542 IKTKYAGYIDRQQDEIARLRASEDTGLPEDIDYAAISGLSKEIQSKLGITRPQTLGQASR 601 Query: 598 IEGMTPAALNLLLIYIKK 615 I G+TPAA++LL+I++KK Sbjct: 602 IPGVTPAAISLLMIHLKK 619 >gi|319788554|ref|YP_004148029.1| glucose inhibited division protein A [Pseudoxanthomonas suwonensis 11-1] gi|317467066|gb|ADV28798.1| glucose inhibited division protein A [Pseudoxanthomonas suwonensis 11-1] Length = 628 Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust. Identities = 293/616 (47%), Positives = 388/616 (62%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAG EAA +A+ GA T L+TH T+G+MSCNPAIGG+GKGHLV+EIDAL Sbjct: 7 YDVIVIGGGHAGTEAALASARAGAGTLLLTHNIETVGAMSCNPAIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M AD AGIQ+R LN KGPAVR R QADR LYR A++R + +Q NL V Q V Sbjct: 67 GGAMAHAADLAGIQWRTLNASKGPAVRATRCQADRGLYRSAIRRMVENQTNLTVFQAAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + Q VVLT GTFL G +HIG AGRMGD PS +L Sbjct: 127 DLVIEGDAVRGAITQTGLRFEAPAVVLTAGTFLAGKVHIGPTTYAAGRMGDPPSTTLAAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGITR 244 + F RLKTGTP R+DG+++ + E+Q D+ L SF+ + RQ+ C IT Sbjct: 187 LRERPFAIDRLKTGTPPRIDGRSLDYAAMEEQPGDDPLPVMSFLGRVEHHPRQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T TH II + S +Y+G I+ GPRYCPSIEDK+VRF E+ HQIF+EPEGL+ Sbjct: 247 TTARTHEIIRGALDRSPLYTGQIEGIGPRYCPSIEDKVVRFAEKESHQIFVEPEGLDVAE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q + +R+I G +I RPGYAIEYD+ +P+ L PTLET+ +SGLF Sbjct: 307 IYPNGISTSLPFDVQLELVRSIRGFGNAHITRPGYAIEYDFFDPRGLKPTLETRLVSGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AGIN+AR L+ R ++Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGINAARHVRGLEGWSPRRDEAYLGVLVDDLITHGTSEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R RF + + L++L T Sbjct: 427 RMFTSRAEYRLQLREDNADLRLTETGRQLGLVDDARWTRFCDKREAIERETARLRALWAT 486 Query: 485 SKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 N + + A + L P+ L + + V E++QI Sbjct: 487 PANAVGREVEQVLGVAVSRETNALDLLKRPELDYAALMRVPALGPAVEDAQVAEQVQIGV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 YA Y RQ E + + E IP+DFDY+++ LS E+++KL ++P ++ QA +I G Sbjct: 547 KYAGYLDRQREEIERQRRHESTPIPQDFDYAAVRGLSAEVQQKLERVRPLSIGQAQRIPG 606 Query: 601 MTPAALNLLLIYIKKN 616 MTPAA++LLL+++++ Sbjct: 607 MTPAAISLLLVHLERQ 622 >gi|298489532|ref|ZP_07007541.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298155959|gb|EFH97070.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 630 Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust. Identities = 290/620 (46%), Positives = 394/620 (63%), Gaps = 17/620 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIRETLENQPNLWIFQQACD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L + Sbjct: 127 DLIVEQDQVRGVVTQMGMRIFADSVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAHR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ K + Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGSKEQHPPQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 247 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTRE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +++I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVQSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCTKRESIELEEQRLKSTWVR 486 Query: 485 SKNLSSTSISFKQDGKTRTAYEF-----LSYPDFSIQNLFSI----CPDARKFSSLVIER 535 +I+ + T +E+ L+ P+ +L ++ C D + V E+ Sbjct: 487 PGTAQGDAIA--EHFGTPLTHEYNLLNLLTRPEIDYASLIALTGQGCTDPQ-----VAEQ 539 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I++ YA Y RQ E ++ E +P+D DY+++ LS E++ KL I +P L QA Sbjct: 540 VEIKTKYAGYIDRQQDEIARLRASEDTRLPEDIDYAAISGLSKEIQSKLGITRPETLGQA 599 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G+TPAA++LL+I++KK Sbjct: 600 SRIPGVTPAAISLLMIHLKK 619 >gi|39998553|ref|NP_954504.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Geobacter sulfurreducens PCA] gi|81170544|sp|Q746Q4|MNMG_GEOSL RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|39985500|gb|AAR36854.1| glucose inhibited division protein A [Geobacter sulfurreducens PCA] gi|298507495|gb|ADI86218.1| tRNA (5-carboxymethylaminomethyl-2-thio-U34)- formylglycinetransferase/reductase [Geobacter sulfurreducens KN400] Length = 627 Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust. Identities = 299/621 (48%), Positives = 394/621 (63%), Gaps = 9/621 (1%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 + YDVIV G GHAGCEAA AA++G T L+T I MSCNPAIGGL KGHLV+EI Sbjct: 7 EKQYDVIVAGAGHAGCEAALAAARMGCETLLLTINLDAIALMSCNPAIGGLAKGHLVKEI 66 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G MG+ DA GIQ+R+LN +KGPAVR R QAD++LYRL M+ + QE+L + QG Sbjct: 67 DALGGEMGKNIDATGIQYRILNTRKGPAVRASRAQADKQLYRLRMKHVMEEQEHLSLKQG 126 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 EV G E + +V + TV+LTTGTF+RG+IH+G P GR GD PS L Sbjct: 127 EVTGLVVEDGRVRGVVTKVGVRFLGKTVILTTGTFMRGLIHVGLTNYPGGRAGDLPSVGL 186 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGI 242 + F GRLKTGTPARLDG TI + + E Q+ D+ +PFSF T++I Q+ C I Sbjct: 187 SDQLRDLGFTVGRLKTGTPARLDGNTIDFSRLEPQYGDDPPVPFSFSTERIDRPQLPCYI 246 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 TN TH II + S +YSG I+ GPRYCPSIEDK++RF +++ HQ FLEPEG +T Sbjct: 247 AYTNERTHEIIRSGLDRSPLYSGVIEGVGPRYCPSIEDKVMRFPDKDRHQSFLEPEGRDT 306 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 YP+G+ST+LP +IQ++ R+I GLE V I+RP YAIEYDY++P +L +LETK I Sbjct: 307 VEYYPSGLSTSLPIDIQYRLYRSIEGLENVEIMRPAYAIEYDYVDPIQLHTSLETKLIRN 366 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQINGT+GYEEAA QGL+AGIN+A + + + R ++YIGVMIDDL + G E Sbjct: 367 LYHAGQINGTSGYEEAAGQGLMAGINAALRVQGEEPLVLGRDEAYIGVMIDDLVTLGTRE 426 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RL G +G + R + + ++++ + + L+ L Sbjct: 427 PYRMFTSRAEYRLLLREDNADLRLRERGHAVGLV---RDEEYRLFLEKRERIGAELERLR 483 Query: 483 LTSKNLSSTSISFKQD-GKT--RTAYEF---LSYPDFSIQNLFSICPDARKFSSLVIERL 536 S SF + G T R A F L PD + + L I P A V E++ Sbjct: 484 TAKLLPSEADPSFLETYGMTDLRNALTFEQLLRRPDITYEELSQIDPVAGMVPPSVKEQV 543 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y Y RQ+ + + E IP D DY+ +P LS E++EKL P L QAS Sbjct: 544 EIQIKYQGYIERQLDQVARARKLEGTRIPDDLDYTVIPGLSAEVREKLLRFLPDTLGQAS 603 Query: 597 KIEGMTPAALNLLLIYIKKNT 617 +I+G+TPAA+ +L + IK + Sbjct: 604 RIQGVTPAAVGILSVAIKSRS 624 >gi|190150986|ref|YP_001969511.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307264343|ref|ZP_07545931.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|238692408|sp|B3H2Q2|MNMG_ACTP7 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|189916117|gb|ACE62369.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306870295|gb|EFN02051.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 630 Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust. Identities = 299/617 (48%), Positives = 389/617 (63%), Gaps = 7/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA+ Sbjct: 7 YDVIVVGGGHAGTEAALAPARMGLKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAM 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q EV Sbjct: 67 GGLMAIAIDQAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIFQQEVV 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E N V + + +VVLT GTFL G IHIG GR GD + L + Sbjct: 127 DILVENNRAVGAVTKMRLTFKARSVVLTAGTFLAGKIHIGLDNYAGGRAGDPAATMLADR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQIECGITR 244 + RLKTGTP RLD +TI +D KQ D L SFM + + RQI C IT Sbjct: 187 LRDLNLRIDRLKTGTPPRLDARTINFDVLAKQHGDAELPVMSFMGSVDLHPRQIPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I ++ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL+T Sbjct: 247 TNEQTHDLIRNSLDRSPMYTGVIEGIGPRYCPSIEDKVMRFSDRNSHQIYLEPEGLSTIE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LP ++Q + ++ GLEK II+PGYAIEYDY +P++L PTLETK I GLF Sbjct: 307 VYPNGISTSLPFDVQMGIVNSMKGLEKTRIIKPGYAIEYDYFDPRDLKPTLETKAIEGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AGIN+A + + +R +Y GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGINAALQVQGKEAWFPTRDLAYTGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL- 483 R+FTSRAEYR+ LR DNAD RLTPI +LG I + R RF + ++ LK + + Sbjct: 427 RVFTSRAEYRLLLREDNADIRLTPIAHELGLIDDARWARFNQKMENIEREHERLKQIWIH 486 Query: 484 -TSKNLSSTSISFKQDGKTRTAY--EFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIE 539 S++L+ + TR A + L P+ + L + A E+++I Sbjct: 487 PQSEHLAVVN-ELVNSPLTREASGEDLLRRPEVTYDKLTQVAAFAPALDDKQAAEQVEIS 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y Q E + K E LIP +FDY + +LSNE++ KL +P ++ QAS+I Sbjct: 546 IKYQGYIEHQQNEIERHKRHENTLIPAEFDYDKVESLSNEVRAKLMQHRPVSIGQASRIS 605 Query: 600 GMTPAALNLLLIYIKKN 616 G+TPAA+++LL+ +KK Sbjct: 606 GITPAAISILLVNLKKQ 622 >gi|71734446|ref|YP_277291.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. phaseolicola 1448A] gi|123634469|sp|Q48BF4|MNMG_PSE14 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|71554999|gb|AAZ34210.1| glucose-inhibited division protein A [Pseudomonas syringae pv. phaseolicola 1448A] Length = 630 Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust. Identities = 290/620 (46%), Positives = 394/620 (63%), Gaps = 17/620 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIRETLENQPNLWIFQQACD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 127 DLIVEQDQVRGVVTQMGMRIFADSVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ +K + Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGNKEQHPPQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 247 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +++I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVQSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCTKRESIELEEQRLKSTWVR 486 Query: 485 SKNLSSTSISFKQDGKTRTAYEF-----LSYPDFSIQNLFSI----CPDARKFSSLVIER 535 +I+ + T +E+ L+ P+ +L +I C D + V E+ Sbjct: 487 PGTAQGDAIA--EHFGTPLTHEYNLLNLLTRPEIDYASLIAITGQGCTDPQ-----VAEQ 539 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I++ Y+ Y RQ E ++ E +P+D DY+++ LS E++ KL I +P L QA Sbjct: 540 VEIKTKYSGYIDRQQDEIARLRASEDTRLPEDIDYAAISGLSKEIQSKLGITRPETLGQA 599 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G+TPAA++LL+I++KK Sbjct: 600 SRIPGVTPAAISLLMIHLKK 619 >gi|294667216|ref|ZP_06732437.1| glucose-inhibited division protein A [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292602997|gb|EFF46427.1| glucose-inhibited division protein A [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 634 Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust. Identities = 289/625 (46%), Positives = 391/625 (62%), Gaps = 20/625 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAG EAA +A+ GA T L+TH T+G+MSCNPAIGG+GKGHLV+EIDAL Sbjct: 8 YDVIVIGGGHAGTEAALASARTGARTLLLTHNIETVGAMSCNPAIGGIGKGHLVKEIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M R AD AGIQ+R LN KGPAVR R QADR LYR A++ + +Q NL V Q V Sbjct: 68 GGAMARAADLAGIQWRTLNASKGPAVRATRCQADRNLYRTAIRCIVEAQPNLTVFQAAVD 127 Query: 126 GF-----NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 +E + + ++ Q + +VVLT GTFL G IH+G+ + AGRMGD P+ Sbjct: 128 DLIIHHGASEADSVRGVITQTGLRFQAPSVVLTAGTFLAGKIHVGQTQYAAGRMGDPPAT 187 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + F RLKTGTP R+DG+T+ + +Q D+ L SFM + RQ+ Sbjct: 188 TLAARLRERPFAIDRLKTGTPPRIDGRTLDYGVMAEQPGDDPLPVMSFMGQVSDHPRQVS 247 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT+T +TH II + S +YSG I+ GPRYCPSIEDK+VRF E+ HQIF+EPEG Sbjct: 248 CWITQTTEQTHEIIRNALHRSPLYSGQIEGIGPRYCPSIEDKVVRFAEKTSHQIFVEPEG 307 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L +YPNGIST+LP ++Q +R+I G +I RPGYAIEYD+ +P+ L +LETK Sbjct: 308 LEVAEIYPNGISTSLPFDVQLALVRSIHGFANAHITRPGYAIEYDFFDPRGLKASLETKA 367 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 + GLF AGQINGTTGYEEAAAQGL+AG+N+AR L R ++Y+GV++DDL + G Sbjct: 368 VGGLFFAGQINGTTGYEEAAAQGLLAGLNAARHVQGLPAWSPRRDEAYLGVLVDDLITHG 427 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +G ++G + + R RFA + + L Sbjct: 428 TTEPYRMFTSRAEYRLQLREDNADARLTGVGREMGLVDDARWARFAAKQEAVQRETARLA 487 Query: 480 SLVLTSKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLFSI------CPDARKFSS 530 +L T N ++ + + + P+ + L + DA+ Sbjct: 488 ALWATPGNALGREVANVLGVTVSRETNVLDLIKRPELNYATLMRVPALGPGVDDAQ---- 543 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 V E+++I YA Y RQ + + E IP FDY+S+ LS E+++KL ++P Sbjct: 544 -VAEQVEISVKYAGYLDRQRDDIARQQRHETTPIPDGFDYASVRGLSIEVQQKLERVRPQ 602 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 ++ QA +I GMTPAA++LLL+++++ Sbjct: 603 HIGQAQRIPGMTPAAISLLLVHLER 627 >gi|71909712|ref|YP_287299.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Dechloromonas aromatica RCB] gi|123626245|sp|Q478A2|MNMG_DECAR RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|71849333|gb|AAZ48829.1| Glucose-inhibited division protein A subfamily [Dechloromonas aromatica RCB] Length = 628 Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust. Identities = 299/620 (48%), Positives = 401/620 (64%), Gaps = 9/620 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA+ GA+T L+TH T+G+MSCNP+IGG+GKGHLVRE+DAL Sbjct: 7 FDVIVVGGGHAGTEAALAAARAGANTLLLTHNLDTLGAMSCNPSIGGIGKGHLVREVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D AGIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Sbjct: 67 GGAMAAATDEAGIQFRILNASKGPAVRATRAQADRVLYKQAIRTRLENQPNLTIFAEACD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q VVLT GTFL G IH+G GRMGD PS SL + Sbjct: 127 DLIVEGDKVCGAVTQLGIRFMAEAVVLTAGTFLNGKIHVGLENYTGGRMGDPPSVSLASR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP RLDGKTI + E+Q +D+ L FSF+ + + +Q+ C IT Sbjct: 187 LKELKLPQGRLKTGTPPRLDGKTIDFSVMEEQHSDDPLPVFSFLGNAAQHPKQLPCWITE 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++N H +FLEPEGL T Sbjct: 247 TNERTHDIIRSGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFADKNQHNVFLEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNG+ST+LP +IQ +R+I G+E +I+RPGYAIEYD+ +P+ L TLETK I GLF Sbjct: 307 IYPNGVSTSLPFDIQLALVRSIRGMENCHILRPGYAIEYDFYDPRGLKDTLETKAIHGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AGIN+ R C R ++Y+GV++DDL ++GV +PY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGINAVRYVRGQSGWCPKRNEAYLGVLVDDLITRGVSDPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+SLR DNAD RLT G +LG + + R F + + LKS + Sbjct: 427 RMFTSRAEYRLSLREDNADLRLTEQGRELGLVDDVRWTAFCQKRDAIAAEQERLKSTWVN 486 Query: 485 SKNLSSTSISFKQDGKT----RTAYEFLSYPDFSIQNLFSICPDARKFSS--LVIERLQI 538 K ++ + GK +E L P+ + +L ++ P A + + LV+E+L+I Sbjct: 487 PK-ITPADDCIRVLGKAIDHEYNLFELLRRPEVTYTSLLTL-PGAGEAQTDPLVVEQLEI 544 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + Y Y RQ E + E ++P + DYSS+ LSNE+++KL+ KP + QAS+I Sbjct: 545 SAKYQGYIDRQAEEVAKSSSYENTVLPSELDYSSVAGLSNEVRQKLAQHKPQTIGQASRI 604 Query: 599 EGMTPAALNLLLIYIKKNTV 618 +G+TPAA++LLLI++K++ + Sbjct: 605 QGITPAAISLLLIHLKRHNL 624 >gi|294627584|ref|ZP_06706167.1| glucose-inhibited division protein A [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292598215|gb|EFF42369.1| glucose-inhibited division protein A [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 634 Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust. Identities = 289/625 (46%), Positives = 391/625 (62%), Gaps = 20/625 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAG EAA +A+ GA T L+TH T+G+MSCNPAIGG+GKGHLV+EIDAL Sbjct: 8 YDVIVIGGGHAGTEAALASARTGARTLLLTHNIETVGAMSCNPAIGGIGKGHLVKEIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M R AD AGIQ+R LN KGPAVR R QADR LYR A++ + +Q NL V Q V Sbjct: 68 GGAMARAADLAGIQWRTLNASKGPAVRATRCQADRNLYRTAIRCIVEAQPNLTVFQAAVD 127 Query: 126 GF-----NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 +E + + ++ Q + +VVLT GTFL G IH+G+ + AGRMGD P+ Sbjct: 128 DLIIHHGASEADSVRGVITQTGLRFQAPSVVLTAGTFLAGKIHVGQTQYAAGRMGDPPAT 187 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + F RLKTGTP R+DG+T+ + +Q D+ L SFM + RQ+ Sbjct: 188 TLAARLRERPFAIDRLKTGTPPRIDGRTLDYGVMAEQPGDDPLPVMSFMGQVSDHPRQVS 247 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT+T +TH II + S +YSG I+ GPRYCPSIEDK+VRF E+ HQIF+EPEG Sbjct: 248 CWITQTTEQTHEIIRNALHRSPLYSGQIEGIGPRYCPSIEDKVVRFAEKTSHQIFVEPEG 307 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L +YPNGIST+LP ++Q +R+I G +I RPGYAIEYD+ +P+ L +LETK Sbjct: 308 LEVAEIYPNGISTSLPFDVQLALVRSIHGFANAHITRPGYAIEYDFFDPRGLKASLETKA 367 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 + GLF AGQINGTTGYEEAAAQGL+AG+N+AR L R ++Y+GV++DDL + G Sbjct: 368 VGGLFFAGQINGTTGYEEAAAQGLLAGLNAARHVQGLPAWSPRRDEAYLGVLVDDLITHG 427 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +G ++G + + R RFA + + L Sbjct: 428 TTEPYRMFTSRAEYRLQLREDNADARLTGVGREMGLVDDARWARFAAKQEAVQRETARLA 487 Query: 480 SLVLTSKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLFSI------CPDARKFSS 530 +L T N ++ + + + P+ + L + DA+ Sbjct: 488 ALWATPGNALGREVANVLGVTVSRETNVLDLIKRPELNYATLMRVPTLGPGVDDAQ---- 543 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 V E+++I YA Y RQ + + E IP FDY+S+ LS E+++KL ++P Sbjct: 544 -VAEQVEIRVKYAGYLDRQRDDIARQQRHETTPIPDGFDYASVRGLSIEVQQKLERVRPQ 602 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 ++ QA +I GMTPAA++LLL+++++ Sbjct: 603 HIGQAQRIPGMTPAAISLLLVHLER 627 >gi|296122782|ref|YP_003630560.1| glucose inhibited division protein A [Planctomyces limnophilus DSM 3776] gi|296015122|gb|ADG68361.1| glucose inhibited division protein A [Planctomyces limnophilus DSM 3776] Length = 623 Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust. Identities = 291/622 (46%), Positives = 398/622 (63%), Gaps = 23/622 (3%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M +DV+VIG GHAGCEAA AA+LGA TAL+T T+G MSCNPAIGG+ KG +VR Sbjct: 11 MSTYDFDVLVIGAGHAGCEAALAAARLGARTALLTMNCDTVGQMSCNPAIGGVAKGQIVR 70 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G MG+V DA G+QFR+LN KGPA+ PR QAD++LY+ M+R I Q +L + Sbjct: 71 EIDALGGEMGKVIDANGLQFRMLNRSKGPAMHSPRAQADKKLYQFDMKRRIEEQPHLTLR 130 Query: 121 QGEVAGFNTE-----KNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMG 175 Q E + ++ ++++ ++ R VVLTTGTFL+ ++H G+ K P GR G Sbjct: 131 QETTERLLVEHVPGNRPQLTGVLVRGGAIYRARAVVLTTGTFLQAIMHTGEAKTPGGRAG 190 Query: 176 DSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN 235 D + +L +S + F R KTGTPARL+G+TI + ++Q D+ PFSFMT K+ Sbjct: 191 DGTTGTLSDSLRELGFQLERFKTGTPARLNGRTIDYSVMQEQPGDDAPQPFSFMTTKLHQ 250 Query: 236 RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFL 295 +Q+ C +T TN H +I N+ + +YSG I S GPRYCPSIEDK+VRF +++ H IFL Sbjct: 251 QQLSCWLTETNESVHEVIRANLHRAPMYSGQINSRGPRYCPSIEDKVVRFADKSSHHIFL 310 Query: 296 EPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTL 355 EPEG NT +Y NGIST+LP ++Q Q I ++ GLEK I+R GYA+EYDY P +L P+L Sbjct: 311 EPEGYNTREIYCNGISTSLPRDVQDQMIHSVKGLEKAEIMRYGYAVEYDYAPPTQLLPSL 370 Query: 356 ETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDL 415 ETK + GL+ AGQINGTTGYEEAA QGL+AGIN+A + + R+++Y+GV+ DDL Sbjct: 371 ETKSVKGLYFAGQINGTTGYEEAAGQGLLAGINAALALQSREPLILDRSEAYLGVLTDDL 430 Query: 416 TSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLR 475 +KGV EPYRMFTSRAE+R+ LR DNAD RLT G +G + + R F +Y Q+ R Sbjct: 431 VTKGVDEPYRMFTSRAEFRLVLRHDNADLRLTAKGRDVGLVDQERWTAFEQYTQDLQAGR 490 Query: 476 SLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICP--DARKFSSLVI 533 LL K+ + T E L P+ + Q L + P A+ S+ Sbjct: 491 QLL----------------CKERFEGATLEEILRRPETTWQTLKELSPVVAAQAISTRAA 534 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+L+IE+ YA Y RQ + ++ IP FDY ++ L E KEKLS ++P +L Sbjct: 535 EQLEIETKYAGYIRRQDSDIEKASKLSNVRIPTAFDYHAIQHLRKEAKEKLSRIQPADLG 594 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QA +I G+TPA L+++L++IK+ Sbjct: 595 QAGRISGITPADLSIVLLHIKE 616 >gi|310765906|gb|ADP10856.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Erwinia sp. Ejp617] Length = 629 Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust. Identities = 294/616 (47%), Positives = 386/616 (62%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIVIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLMG D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMGHAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLLVENDRVVGAATQMGLKFRAKAVVLTVGTFLDGKIHIGMDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGITR 244 + GRLKTGTP R+D ++I + Q D L FSFM D + +Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARSIDFSLLAPQHGDNPLPVFSFMGDVRQHPQQVPCYITY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHEVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMHGMENAKIVRPGYAIEYDFFDPRDLKPTLESKYIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+ R S + R +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAGRLSADKESWAPRRDQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R RF + ++ R L+ + + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTAAGRELGLVDDARWARFNEKLESIERERQRLRDIWVH 486 Query: 485 SKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICP-DARKFSSLVIERLQIES 540 K+ S+ K + + L P+ + Q L ++ + E+++I+ Sbjct: 487 PKSECVADVNSVISAALTKEASGEDLLRRPEMTYQQLMTLSHFAPALADAQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E E +P D DY + LSNE KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQEEIDRQLRNENTALPVDLDYQQVSGLSNEAIAKLNESKPGSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LLIY+KK Sbjct: 607 ITPAAISILLIYLKKQ 622 >gi|78045947|ref|YP_362122.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|123586143|sp|Q3BYP1|MNMG_XANC5 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|78034377|emb|CAJ22022.1| glucose inhibited division protein A [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 634 Score = 560 bits (1442), Expect = e-157, Method: Compositional matrix adjust. Identities = 288/625 (46%), Positives = 390/625 (62%), Gaps = 20/625 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAG EAA +A+ GA T L+TH T+G+MSCNPAIGG+GKGHLV+EID L Sbjct: 8 YDVIVIGGGHAGTEAALASARTGARTLLLTHNIETVGAMSCNPAIGGIGKGHLVKEIDGL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M R AD AGIQ+R LN KGPAVR R QADR LYR A++ + +Q NL V Q V Sbjct: 68 GGAMARAADLAGIQWRTLNASKGPAVRATRCQADRNLYRTAIRCIVEAQPNLTVFQAAVD 127 Query: 126 GF-----NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 +E + + ++ Q + +VVLT GTFL G IH+G+ + AGRMGD P+ Sbjct: 128 DLIIHNGTSEADSVRGVITQTGLRFQAPSVVLTAGTFLAGKIHVGETQYAAGRMGDPPAT 187 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + F RLKTGTP R+DG+T+ + +Q D+ L SFM + RQ+ Sbjct: 188 TLAARLRERPFAIDRLKTGTPPRIDGRTLDYGVMAEQPGDDPLPVMSFMGQVSDHPRQVS 247 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT+T +TH II + S +YSG I+ GPRYCPSIEDK+VRF E+ HQIF+EPEG Sbjct: 248 CWITQTTEQTHEIIRNALHRSPLYSGQIEGIGPRYCPSIEDKVVRFAEKTSHQIFVEPEG 307 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L +YPNGIST+LP ++Q +R+I G +I RPGYAIEYD+ +P+ L +LETK Sbjct: 308 LEVAEIYPNGISTSLPFDVQLALVRSIHGFANAHITRPGYAIEYDFFDPRGLKASLETKA 367 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 + GLF AGQINGTTGYEEAAAQGL+AG+N+AR L R ++Y+GV++DDL + G Sbjct: 368 VGGLFFAGQINGTTGYEEAAAQGLLAGLNAARHVQGLPAWSPRRDEAYLGVLVDDLITHG 427 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +G +G + + R RFA + + L Sbjct: 428 TTEPYRMFTSRAEYRLQLREDNADARLTGVGRAMGLVDDARWARFAAKQEAVQRETTRLS 487 Query: 480 SLVLTSKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLFSI------CPDARKFSS 530 +L T N ++ + + + P+ + L + DA+ Sbjct: 488 ALWATPGNALGREVAGALGVTVSRETNVLDLIKRPELTYATLMRVPTLGPGVDDAQ---- 543 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 V E+++I YA Y RQ + + E IP+ FDY+S+ LS E+++KL ++P Sbjct: 544 -VAEQVEISVKYAGYLDRQRDDIARQQRHETTPIPEGFDYASVRGLSIEVQQKLERVRPQ 602 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 ++ QA +I GMTPAA++LLL+++++ Sbjct: 603 HIGQAQRIPGMTPAAISLLLVHLER 627 >gi|58696842|ref|ZP_00372364.1| glucose-inhibited division protein A [Wolbachia endosymbiont of Drosophila simulans] gi|58536952|gb|EAL60118.1| glucose-inhibited division protein A [Wolbachia endosymbiont of Drosophila simulans] Length = 603 Score = 560 bits (1442), Expect = e-157, Method: Compositional matrix adjust. Identities = 289/600 (48%), Positives = 380/600 (63%), Gaps = 25/600 (4%) Query: 44 MSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELY 103 MSCNPAIGG+ KG +VRE+DALDG+MGR D A I +LN +G AV GPR QADR+LY Sbjct: 1 MSCNPAIGGVAKGVVVREVDALDGIMGRAIDRASIHSVILNSSRGAAVWGPRAQADRKLY 60 Query: 104 RLAMQREILSQENLDVIQGEVAGFNTEKN-----IISSIVMQDNSMIRCSTVVLTTGTFL 158 + A+Q IL+ NL V + V F E N I +++ I VVLTTGTFL Sbjct: 61 KQAIQEIILNYNNLTVKEESVDDFLIESNNNGELCIKAVITSSGEHILTGKVVLTTGTFL 120 Query: 159 RGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQF 218 +GVIHIG+ P+GRMGD P+ L N+ K+DF GRL+TGTP RLD TI W ++Q Sbjct: 121 QGVIHIGEQTTPSGRMGDKPAVELANTLNKYDFRLGRLRTGTPPRLDRGTINWSILQEQV 180 Query: 219 ADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAI-YSGDIKSYGPRYCPS 277 D +PFS++T+KI Q+ C IT TN TH+II EN+ SA Y D+ PRYCPS Sbjct: 181 GDNPPVPFSYLTEKINQPQVSCFITHTNENTHKIIRENLHRSASSYLSDV--VAPRYCPS 238 Query: 278 IEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRP 337 IE K+ +F E++ HQIFLEPEGL+ D VYPNGIS +LP E+Q + I++I GLE I+RP Sbjct: 239 IEVKVKKFAEKSSHQIFLEPEGLDDDTVYPNGISNSLPIEVQREMIKSIKGLENAEILRP 298 Query: 338 GYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKS-NKL 396 GYA+EYDYI+P+ELF TLETKK+ GL+ AGQINGTTGYEEAA QG++AGIN+A + K Sbjct: 299 GYAVEYDYIDPRELFHTLETKKVKGLYFAGQINGTTGYEEAAGQGIIAGINAALSAFEKK 358 Query: 397 DCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCI 456 + RTDSYIGVMIDDL +KGV+EPYR+FTSRAEYR+++R DNAD RLT G + + Sbjct: 359 ESFVLHRTDSYIGVMIDDLVTKGVIEPYRLFTSRAEYRLAIRSDNADRRLTQKGYDISLV 418 Query: 457 GERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQ 516 R ++ L L SL +T + L S I DG +TA + LSYP+ Sbjct: 419 SHERYSVLQNKLESIKQLEEKLGSLTITPEQLRSYGIKISYDGIRKTALDLLSYPNIDWN 478 Query: 517 NLFSICPDARKFSSL----------------VIERLQIESSYAAYTGRQMIEAKEIKFEE 560 L I P+ + + E ++IE+ Y Y RQ + K ++ E Sbjct: 479 KLQEIWPELSSVTRWNDKMGHTKADNRAKNEICEAVEIEAKYKPYLIRQEADMKFLREEI 538 Query: 561 KRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVKL 620 IP DF+YS + LS+E+ EKL +KP + A +I+G+TPAA+ +L+Y++ K+ Sbjct: 539 NTQIPIDFNYSQVKGLSSEVIEKLQTIKPATIGIAKQIQGITPAAIVSILVYLRNRKTKV 598 >gi|157373139|ref|YP_001481128.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Serratia proteamaculans 568] gi|205375714|sp|A8GLL0|MNMG_SERP5 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|157324903|gb|ABV44000.1| glucose inhibited division protein A [Serratia proteamaculans 568] Length = 629 Score = 560 bits (1442), Expect = e-157, Method: Compositional matrix adjust. Identities = 292/617 (47%), Positives = 395/617 (64%), Gaps = 5/617 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA Sbjct: 6 QFDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLM D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 66 LGGLMATAIDHAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQPV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + V Q R VVLT GTFL G IHIG GR GD PS SL Sbjct: 126 EDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPSISLSQ 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 + RLKTGTP R+D ++I + Q D + FSFM + + Q+ C IT Sbjct: 186 RLRELPLRVNRLKTGTPPRIDARSIDFSVLAPQHGDTPIPVFSFMGNAGQHPEQMACYIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 246 YTNEKTHDVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q Q +R++ G++ IIRPGYAIEYD+ +P++L PTLE+K I GL Sbjct: 306 EIYPNGISTSLPFDVQMQIVRSMEGMQNARIIRPGYAIEYDFFDPRDLKPTLESKFIQGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+ R +N+ + R +Y+GV++DDL++ G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGLNAGRYANEDEGWSPRRDQAYLGVLVDDLSTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT G +LG + + R RF++ ++ R L+ + + Sbjct: 426 YRMFTSRAEYRLMLREDNADLRLTEKGRELGLVDDARWARFSEKLEHIEQERQRLRDIWM 485 Query: 484 --TSKNLSSTSISFKQD-GKTRTAYEFLSYPDFSIQNLFSICPDARKFS-SLVIERLQIE 539 ++N+ + K + E L P+ L S+ A + + E+++I+ Sbjct: 486 HPHAENVEQVNALLKAPLSREANGEELLRRPEMDYTQLTSVAAFAPPLADTQAAEQVEIQ 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ E ++ + E ++P D DY + LSNE+ KL+ KP ++ QAS+I Sbjct: 546 VKYEGYIARQQEEIEKQQRNENTVLPLDLDYQQVSGLSNEVIAKLNDHKPNSIGQASRIS 605 Query: 600 GMTPAALNLLLIYIKKN 616 G+TPAA+++LLI++KK Sbjct: 606 GITPAAISILLIWLKKQ 622 >gi|289677542|ref|ZP_06498432.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. syringae FF5] Length = 631 Score = 560 bits (1442), Expect = e-157, Method: Compositional matrix adjust. Identities = 295/619 (47%), Positives = 392/619 (63%), Gaps = 15/619 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 8 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREIL-SQENLDVIQGEV 124 G M D GIQFRVLN +KGPAVR R QADR LY+ A+ REIL +Q NL + Q Sbjct: 68 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAI-REILENQPNLWIFQQAC 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 127 DDLIVEQDQVRGVVTQMGMRIFAESVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAQ 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGIT 243 + GRLKTGTP R+DG+++ + +Q D + SF+ +K + Q+ C IT Sbjct: 187 RLRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGNKEQHPPQVSCWIT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 247 HTNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTH 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q Q +++I G+E +I+RPGYAIEYDY +P++L +LETK I GL Sbjct: 307 ELYPNGISTSLPFDVQLQIVQSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EP Sbjct: 367 FFAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 427 YRMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCTKRESIELEEQRLKSTWV 486 Query: 484 TSKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSI----CPDARKFSSLVIERL 536 +I+ Y L+ P+ +L SI C D + V E++ Sbjct: 487 RPGTEQGDAIAAHFGTPLTHEYNLLNLLTRPEIDYASLISITGQGCIDPQ-----VAEQV 541 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I++ YA Y RQ E ++ E +P+D DY+++ LS E++ KL I +P L QAS Sbjct: 542 EIKTKYAGYIDRQQDEIARLRASEDTGLPEDIDYAAISGLSKEIQSKLGITRPQTLGQAS 601 Query: 597 KIEGMTPAALNLLLIYIKK 615 +I G+TPAA++LL+I++KK Sbjct: 602 RIPGVTPAAISLLMIHLKK 620 >gi|221135171|ref|ZP_03561474.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Glaciecola sp. HTCC2999] Length = 629 Score = 560 bits (1442), Expect = e-157, Method: Compositional matrix adjust. Identities = 296/620 (47%), Positives = 396/620 (63%), Gaps = 7/620 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+GGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA Sbjct: 6 SYDVIVVGGGHAGTEAALAAARMGVKTLLLTHNMETLGQMSCNPAIGGIGKGHLVKEIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D AGIQFR LN KGPAVR R QADR LYR A+++ + Q+NL + Q Sbjct: 66 LGGTMAHAIDHAGIQFRTLNSSKGPAVRATRAQADRNLYRNAVRKSLEHQQNLTIFQQSC 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E N ++ +V Q + TVV+T GTFL G IHIG GR GD PS +L Sbjct: 126 DDIIVENNRVTGVVTQMGLKFKAKTVVITVGTFLGGTIHIGMENYKGGRAGDPPSIALAQ 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN--RQIECGI 242 F RLKTGTPARLD +T+ ++ + Q D L FSFM K+ RQI C I Sbjct: 186 RLRALPFRVDRLKTGTPARLDARTLNYEVMQAQPGDTPLPVFSFM-GKVEQHPRQIPCYI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF +++ HQIF+EPEGL++ Sbjct: 245 THTNERTHEIIRGGLDRSPMYTGVIEGIGPRYCPSIEDKINRFADKDSHQIFVEPEGLDS 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNGIST+LP ++Q +R+I G E +IIRPGYAIEYD+ +P++L +LETK I G Sbjct: 305 IEIYPNGISTSLPFDVQFDLVRSIKGFENAHIIRPGYAIEYDFFDPRDLKQSLETKFIEG 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEA AQGL+AG N+A ++ I R +YIGV+IDDL + G E Sbjct: 365 LFFAGQINGTTGYEEAGAQGLIAGANAALQTQDKAPISLRRDQAYIGVLIDDLATMGTKE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLTP+G ++G + + R F + + + LK+ Sbjct: 425 PYRMFTSRAEYRLLLREDNADMRLTPLGREVGLVDDARWAAFNEKLDLIEQEKQRLKAHY 484 Query: 483 LTSKNLSSTSIS--FKQD-GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VIERLQI 538 + ++ ++ +++ K + T E + P+ + + L I + E+++I Sbjct: 485 VHPEHSATPALNPLLKNPVSREHTFEELIRRPEMTYKKLMEIEGIGPGLEHVQAAEQVEI 544 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + YA Y RQ E + + E+ L+P FDYS + LSNE+ KL+ +P + +AS+I Sbjct: 545 QIKYAGYIERQKEEIAKTQRHEETLLPPTFDYSQISGLSNEVVAKLTESRPETIGKASRI 604 Query: 599 EGMTPAALNLLLIYIKKNTV 618 G+TPAA++LLL+Y+KK+ + Sbjct: 605 SGITPAAISLLLVYLKKHNM 624 >gi|241762351|ref|ZP_04760431.1| glucose inhibited division protein A [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373145|gb|EER62784.1| glucose inhibited division protein A [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 621 Score = 559 bits (1441), Expect = e-157, Method: Compositional matrix adjust. Identities = 290/614 (47%), Positives = 405/614 (65%), Gaps = 4/614 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D++VIGGGHAGCEAAAVAA++GA TAL+T + IG+MSCNPAIGGLGKGHLVREIDA Sbjct: 11 FDIVVIGGGHAGCEAAAVAARMGAKTALVTMDSEQIGAMSCNPAIGGLGKGHLVREIDAW 70 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGLM AD A I +R+LN KG AV+GPR QADR Y+ A+Q + Q +L +I+G Sbjct: 71 DGLMPHAADYAAIHYRMLNRSKGSAVQGPRIQADRNRYKKAIQTALKEQAHLTIIEGMAE 130 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 F +K + ++++ D ++ +VVLTTGTFL + G+ K GR+G+ PS L Sbjct: 131 SFQMDKGKVKAVLLADGRSLKTESVVLTTGTFLDAWLFCGEKKWRGGRIGEQPSIGLAEQ 190 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPF-SFMTDKITNRQIECGITR 244 D GRLKTGTPARLDG+TI W + ++Q +DE S+ T ++ QI C +TR Sbjct: 191 LKALDLPLGRLKTGTPARLDGRTIDWARLQRQPSDEDAWTMASYGTGRVAP-QIACSLTR 249 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 +N +TH II + S ++SG I+ GPRYCPSIEDKI++FG+R+GHQIFLEPEGL+T + Sbjct: 250 SNQKTHDIIRAGLDRSPLFSGAIEGRGPRYCPSIEDKIMKFGDRDGHQIFLEPEGLDTPL 309 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LPE++Q FI +I GLE I++ GYA+EY++I+P+ L LE K + G+F Sbjct: 310 IYPNGISTSLPEDVQQAFINSIEGLENTKIVQFGYAVEYEFIDPRSLTHQLELKALKGVF 369 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGLVAGI++A F R +SYIGV+IDDL +GV EPY Sbjct: 370 CAGQINGTTGYEEAAAQGLVAGISAACAVAGKAPPVFDRRNSYIGVIIDDLVLQGVTEPY 429 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM T+RAEYR+ LR DNA RL+ G +G K + E + LL+ + Sbjct: 430 RMLTARAEYRLGLRADNAVTRLSGQAKAFGALGTEMTDFVTKRLAEREKCQKLLEK-AAS 488 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 S+++ + + + G + + +E+L +P + Q+L ++ P+ +FS V+ + + YA Sbjct: 489 SRDMQAVGANVTE-GASHSLFEWLRFPAVTRQHLEALIPELTEFSDAVVSEIIDDGRYAP 547 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ E + + +P + DY+++ LSNE+ EK S +P ++ AS++ G+TPA Sbjct: 548 YLERQDAELARLAGHDNMPLPAELDYATIAGLSNEMVEKFSAARPPDMASASRVRGVTPA 607 Query: 605 ALNLLLIYIKKNTV 618 AL +LI+ KK T+ Sbjct: 608 ALAAILIHAKKVTL 621 >gi|114778889|ref|ZP_01453686.1| glucose-inhibited division protein A [Mariprofundus ferrooxydans PV-1] gi|114550858|gb|EAU53424.1| glucose-inhibited division protein A [Mariprofundus ferrooxydans PV-1] Length = 624 Score = 559 bits (1441), Expect = e-157, Method: Compositional matrix adjust. Identities = 288/617 (46%), Positives = 390/617 (63%), Gaps = 9/617 (1%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALD 66 +VIV+G GHAGCEAA AA GAS LIT TI MSCNPAIGG+GKGHLV E+DAL Sbjct: 11 NVIVVGAGHAGCEAAWAAASRGASVRLITQNLDTIAKMSCNPAIGGIGKGHLVHEVDALG 70 Query: 67 GLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAG 126 GLMG AD + +Q+R+LN +KGPAV+ R Q DR Y + M+ + S + + QG ++ Sbjct: 71 GLMGVAADRSALQYRLLNSRKGPAVQATRAQCDRRTYHIVMRELLDSNPMIHLHQGSISE 130 Query: 127 FNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSF 186 + + +S ++ + S VVLTTGTFL GV ++G AGR GD+ N L Sbjct: 131 LLFDGDRVSGVLDELGVRHEASAVVLTTGTFLGGVTYVGDKSSSAGRSGDAAVNGLTEEL 190 Query: 187 MKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTN 246 K +F GRLKTGTP RLD KTI WD+ EKQ D + PFS + +++ RQ++C ITRT Sbjct: 191 YKREFKVGRLKTGTPPRLDKKTIRWDQLEKQPGDLNVRPFSVLHEEVVRRQLDCAITRTT 250 Query: 247 LETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVY 306 +TH II EN+ S +Y+G I GPRYCPSIEDK+VRF ++ HQIFLEPEG + + VY Sbjct: 251 EKTHDIIRENLSRSPMYTGLIDGVGPRYCPSIEDKVVRFSDKTSHQIFLEPEGWDHNEVY 310 Query: 307 PNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLA 366 PNGIST+LP ++Q F+R+IPGLE VNIIRPGYA+EYDY++P EL P+LETK+++GLF A Sbjct: 311 PNGISTSLPIDVQWAFMRSIPGLEGVNIIRPGYAVEYDYVDPTELRPSLETKRVAGLFHA 370 Query: 367 GQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRM 426 GQ+NGTTGYEEAAAQG++AGIN+A + L R+ +YIGVM+DDL SKGV+EPYRM Sbjct: 371 GQLNGTTGYEEAAAQGVLAGINAASVALGLPAWVPDRSQAYIGVMVDDLVSKGVMEPYRM 430 Query: 427 FTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSK 486 FTSRAE+R+ LR DNAD RL P + LG E R+ F Q N L ++ T Sbjct: 431 FTSRAEFRLHLREDNADLRLGPSSVTLGLYSEARRCSFQSRQQRVN---DLFEAACATCV 487 Query: 487 NLSS------TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + +++ G++ + D + + + L Sbjct: 488 GIGEAWRGRLSALGLPVPGQSMMLPAYCHRDDVDPAVAMQLLEGYEVLGAHDVASLGSLL 547 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y +Q+ + + K E + +P FDYS +P LS E ++LS ++P L QAS++ G Sbjct: 548 HYHGYLDKQLQDIERFKQMESQSLPDGFDYSIVPGLSIECAQRLSSVQPMTLGQASRLSG 607 Query: 601 MTPAALNLLLIYIKKNT 617 +TPAA+ L+++++ + Sbjct: 608 VTPAAVTSLVMFLRGTS 624 >gi|270264085|ref|ZP_06192352.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Serratia odorifera 4Rx13] gi|270041734|gb|EFA14831.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Serratia odorifera 4Rx13] Length = 629 Score = 559 bits (1441), Expect = e-157, Method: Compositional matrix adjust. Identities = 291/616 (47%), Positives = 394/616 (63%), Gaps = 5/616 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA Sbjct: 6 QFDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLM D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 66 LGGLMATAIDHAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQPV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + V Q R VVLT GTFL G IHIG GR GD PS SL Sbjct: 126 EDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPSISLSQ 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 + RLKTGTP R+D +TI + Q D + FSFM + + Q+ C IT Sbjct: 186 RLRELPLRVNRLKTGTPPRIDARTIDFSVLAPQHGDTPIPVFSFMGNANQHPEQMACYIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 246 HTNEKTHDVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q Q +R++ G++ I+RPGYAIEYD+ +P++L PTLE+K I GL Sbjct: 306 EIYPNGISTSLPFDVQMQIVRSMEGMQNARIVRPGYAIEYDFFDPRDLKPTLESKFIQGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+ R +N+ + R +Y+GV++DDL++ G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGLNAGRYANEDEGWSPRRDQAYLGVLVDDLSTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT G +LG + + R RF++ ++ R L+ + + Sbjct: 426 YRMFTSRAEYRLMLREDNADLRLTEKGRELGLVDDARWARFSEKLEHIEQERQRLRDIWM 485 Query: 484 --TSKNLSSTSISFKQD-GKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIE 539 ++N+ + K + E L P+ L ++ A + E+++I+ Sbjct: 486 HPHAENVEQVNALLKAPLSREANGEELLRRPEMDYALLTTVAAFAPPLVDTQAAEQVEIQ 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ E ++ + E ++P D DY + LSNE+ KL+ KP ++ QAS+I Sbjct: 546 VKYEGYIARQQEEIEKQQRNENTVLPLDLDYQQVSGLSNEVIAKLNDHKPNSIGQASRIS 605 Query: 600 GMTPAALNLLLIYIKK 615 G+TPAA+++LLI++KK Sbjct: 606 GITPAAISILLIWLKK 621 >gi|93005980|ref|YP_580417.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Psychrobacter cryohalolentis K5] gi|122415453|sp|Q1QBM0|MNMG_PSYCK RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|92393658|gb|ABE74933.1| glucose inhibited division protein A [Psychrobacter cryohalolentis K5] Length = 632 Score = 559 bits (1441), Expect = e-157, Method: Compositional matrix adjust. Identities = 293/616 (47%), Positives = 391/616 (63%), Gaps = 11/616 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDV+VIGGGHAG EAA AA++GA T L+TH T+G MSCNPAIGG+GK HLVREID Sbjct: 5 KNYDVVVIGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPAIGGIGKSHLVREID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFRVLN +KG AVR R QADR LY+ A++ + +Q NLD+ Q Sbjct: 65 ALGGAMALATDKSGIQFRVLNSRKGAAVRATRAQADRILYKAAIRHTLENQPNLDIFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 E +++V + TVVLT+GTFL GVIHIG GR GD PS L Sbjct: 125 ADDILVENGRATAVVTATGIIFNTQTVVLTSGTFLGGVIHIGLESSKGGRAGDQPSIKLA 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + + GRLKTGTPAR+D +++ + Q D L S+M D + Q+ C I Sbjct: 185 DRLRELKLPVGRLKTGTPARIDARSVDFSVMTVQPGDTPLPVMSYMGDVSMHPEQVNCYI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II EN+ S ++SG I+ GPRYCPSIEDKI RF +++ HQIF+EPEGL T Sbjct: 245 THTNARTHDIIRENLDRSPMFSGKIEGVGPRYCPSIEDKIHRFADKDSHQIFIEPEGLTT 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNGIST+LP ++Q +FI ++ GLE +I RPGYAIEYDY +P+ L PTLETK I Sbjct: 305 HELYPNGISTSLPFDVQLEFIHSMKGLENAHITRPGYAIEYDYFDPQNLKPTLETKSIDR 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSAR---KSNKLDCICFSRTDSYIGVMIDDLTSKG 419 L+ AGQINGTTGYEEA QGL+AG N+A ++N+ D R ++Y+GV++DDL + G Sbjct: 365 LYFAGQINGTTGYEEAGVQGLLAGTNAALVTCENNEFDVWTPRRDEAYLGVLVDDLITHG 424 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT G KLG + + R + + + ++ + LK Sbjct: 425 TTEPYRMFTSRAEYRLLLREDNADQRLTETGRKLGLVDDVRWQAYEEKMEAIASETARLK 484 Query: 480 SLVLTSKNLSSTSISFKQDG----KTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIER 535 + T N ++ +Q G K TA++ L P ++ +I + + V E+ Sbjct: 485 DMWATPANALGKKVT-EQTGEVLSKEATAFDLLKRPQIHFADIAAITDS--QVDAQVGEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I YA Y RQ + ++K E +P DFDYS + LSNE+ +KL+ ++P L QA Sbjct: 542 IEISVKYAGYIDRQQEDIDQMKRLENTALPIDFDYSVVSGLSNEIVQKLAQVRPSTLAQA 601 Query: 596 SKIEGMTPAALNLLLI 611 +I G+TPAA+ LL + Sbjct: 602 GRISGVTPAAIQLLAM 617 >gi|161505600|ref|YP_001572712.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|189039354|sp|A9MJQ9|MNMG_SALAR RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|160866947|gb|ABX23570.1| hypothetical protein SARI_03776 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 629 Score = 559 bits (1440), Expect = e-157, Method: Compositional matrix adjust. Identities = 295/622 (47%), Positives = 391/622 (62%), Gaps = 17/622 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAAAIDRAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMLFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVSRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFSDRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRDLGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFKQD---------GKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIE 534 S F D + + + L P+ + L S+ A E Sbjct: 487 P------SAEFAADVNAHLTTPLSREASGEDLLRRPEMTYAQLTSLSAFAPALEDEQAAE 540 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ Q Sbjct: 541 QVEIQVKYEGYIARQQDEIEKQLRNENTLLPATLDYRLVSGLSNEVIAKLNDHKPASIGQ 600 Query: 595 ASKIEGMTPAALNLLLIYIKKN 616 AS+I G+TPAA+++LL+++KK Sbjct: 601 ASRISGVTPAAISILLVWLKKQ 622 >gi|88860625|ref|ZP_01135262.1| tRNA modification, oxidoreductase-like with FAD/NAD(P)-binding domain [Pseudoalteromonas tunicata D2] gi|88817220|gb|EAR27038.1| tRNA modification, oxidoreductase-like with FAD/NAD(P)-binding domain [Pseudoalteromonas tunicata D2] Length = 629 Score = 558 bits (1438), Expect = e-157, Method: Compositional matrix adjust. Identities = 292/621 (47%), Positives = 395/621 (63%), Gaps = 5/621 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + +DVIV+GGGHAG EAA +A++G +T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 IFHEHFDVIVVGGGHAGTEAALASARMGMNTLLLTHNMDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G M + D GIQFR LN KGPAVR R QADR+LY+ A+Q+ + +QENL + Sbjct: 62 EIDALGGAMAQAIDKGGIQFRTLNSSKGPAVRATRAQADRKLYKEAIQQTLQNQENLKIF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q E + + +V Q +VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQSCDDLIVENDHVVGVVTQMGLRFSSRSVVLTVGTFLGGQIHIGMESFSGGRAGDQPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + F RLKTGTP R+D +T+ + K + Q D FSFM + + QI Sbjct: 182 ALAKRLRELPFRVSRLKTGTPPRIDARTVDFSKMQIQPGDTPTPVFSFMGKQSDHPTQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDKI+RF +++ HQIF+EPEG Sbjct: 242 CYITYTNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKIMRFADKDRHQIFVEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +++I G E +I RPGYAIEYD+ +P++L +LETK Sbjct: 302 LTTHELYPNGISTSLPFDVQLQIVQSITGFENAHICRPGYAIEYDFFDPRDLKQSLETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 ISGLF AGQINGTTGYEEAAAQGL+AG+N+A + D R ++Y GV+IDDL + G Sbjct: 362 ISGLFFAGQINGTTGYEEAAAQGLIAGMNAALQVQGKDAWTPRRDEAYAGVLIDDLATLG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT G +LG + + R F I+E LK Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTAKGRELGLVNDERWAAFNIKIEEIEKEAQRLK 481 Query: 480 SLVLTSKN--LSSTSISFKQD-GKTRTAYEFLSYPDFSIQNLFSI-CPDARKFSSLVIER 535 + + + L + + K + + E + P+ + L I + + +E+ Sbjct: 482 EVWIHKDHPQLEAVNNLLKAPLSREASLEELIRRPEVTYNELVKIEGLGSESTNEQALEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ YA Y RQ E + E L+P D+DY+++ LSNE+ KLS ++P + QA Sbjct: 542 VEIQIKYAGYIARQQEEIDKQLRHEMTLLPADYDYAAVSGLSNEVVAKLSDVRPQTIGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKKN 616 S+I G+TPAA++LLL+Y+KK Sbjct: 602 SRISGITPAAISLLLVYLKKQ 622 >gi|237801670|ref|ZP_04590131.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. oryzae str. 1_6] gi|331024529|gb|EGI04585.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. oryzae str. 1_6] Length = 630 Score = 558 bits (1438), Expect = e-157, Method: Compositional matrix adjust. Identities = 290/618 (46%), Positives = 390/618 (63%), Gaps = 13/618 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAIATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIRETLENQPNLWIFQQACD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L + Sbjct: 127 DLIVEQDQVRGVVTQMGMRIFADSVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAHR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ K + +Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGSKEQHPKQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 247 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +++I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVQSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGANAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCTKRESIEQEEQRLKSTWVR 486 Query: 485 SKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSI----CPDARKFSSLVIERLQ 537 +I+ Y L+ P+ +L +I C D + V E+++ Sbjct: 487 PGTEQGDAIAAHFGTPLTHEYNLLNLLTRPEIDYASLINITGQGCIDPQ-----VAEQVE 541 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I++ YA Y RQ E ++ E +P+D DY+ + LS E++ KL I +P L QAS+ Sbjct: 542 IKTKYAGYIDRQQDEIARLRASEDTRLPEDIDYAGISGLSKEIQSKLGITRPETLGQASR 601 Query: 598 IEGMTPAALNLLLIYIKK 615 I G+TPAA++LL+I++KK Sbjct: 602 IPGVTPAAISLLMIHLKK 619 >gi|304398008|ref|ZP_07379883.1| glucose inhibited division protein A [Pantoea sp. aB] gi|304354294|gb|EFM18666.1| glucose inhibited division protein A [Pantoea sp. aB] Length = 629 Score = 558 bits (1438), Expect = e-157, Method: Compositional matrix adjust. Identities = 291/616 (47%), Positives = 390/616 (63%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIVIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMASAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R TVVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKTVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLAKR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 RLKTGTP R+D +TI + Q D+ + FSFM + + +Q+ C IT Sbjct: 187 LRALPLRVNRLKTGTPPRIDARTIDFSVLSPQHGDDPMPVFSFMGNASQHPQQVPCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNSHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQIQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIHGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQG++AG+N+AR+S + R +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGMLAGLNAARQSADKEGWAPRRDQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R RF + ++ R L+ + + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTETGRELGLVDDARWARFNEKLEAIEQERQRLRDIWVH 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 K+ T ++ K + + L P+ + L ++ + E+++I+ Sbjct: 487 PKSEHVTEVNTVLSAPLTKEASGEDLLRRPELTYLKLMTLDAFGPALADEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E E L+P + DY + LSNE+ KL+ KP ++ QA++I G Sbjct: 547 KYEGYIARQQEEIDRQLRNENTLLPVELDYRHVNGLSNEVIAKLNDHKPVSIGQATRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LLIY+KK Sbjct: 607 ITPAAISILLIYLKKQ 622 >gi|308188710|ref|YP_003932841.1| glucose-inhibited division protein A [Pantoea vagans C9-1] gi|308059220|gb|ADO11392.1| Glucose-inhibited division protein A [Pantoea vagans C9-1] Length = 629 Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust. Identities = 291/616 (47%), Positives = 389/616 (63%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIVIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMASAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R TVVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKTVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLAKR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 RLKTGTP R+D +TI + Q D + FSFM + + +Q+ C IT Sbjct: 187 LRALPLRVNRLKTGTPPRIDARTIDFSVLSPQHGDNPMPVFSFMGNASQHPQQVPCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNSHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQIQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIHGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQG++AG+N+AR+S + R +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGMLAGLNAARQSADKEGWAPRRDQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R RF + ++ R L+ + + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTETGRELGLVDDARWARFNQKLEAIEQERQRLRDIWVH 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 K+ T ++ K + + L P+ + L ++ + E+++I+ Sbjct: 487 PKSEHVTEVNTVLSAPLTKEASGEDLLRRPELTYLKLMTLDAFGPALADEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E E L+P + DY + LSNE+ KL+ KP ++ QA++I G Sbjct: 547 KYEGYIARQQEEIDRQLRNENTLLPVELDYRQVNGLSNEVIAKLNDHKPVSIGQATRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LLIY+KK Sbjct: 607 ITPAAISILLIYLKKQ 622 >gi|169867302|ref|XP_001840232.1| mitochondrial translation optimization protein [Coprinopsis cinerea okayama7#130] gi|116498784|gb|EAU81679.1| mitochondrial translation optimization protein [Coprinopsis cinerea okayama7#130] Length = 669 Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust. Identities = 316/639 (49%), Positives = 407/639 (63%), Gaps = 36/639 (5%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDV +IGGGHAGCEAAA AA+ GA T L+T K TIG +SCNP+IGG+GKG LVREIDA Sbjct: 23 NYDVCIIGGGHAGCEAAAGAARTGARTVLLTQKLETIGELSCNPSIGGVGKGTLVREIDA 82 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDG+MGRVAD AGIQF+VLN KG AV GPRTQ DR LY+ MQ+ + + NLD+ G V Sbjct: 83 LDGVMGRVADKAGIQFQVLNRSKGAAVWGPRTQIDRTLYKQNMQKILHNYPNLDIKAGSV 142 Query: 125 AGFNTEK--------------------NIISSIVMQDN------SMIRCSTVVLTTGTFL 158 E+ N+ + DN +I CS VV+ TGTFL Sbjct: 143 FDLIIERSHTDAGWGRVQGVQLGMWLLNVTDKCQLTDNPALDSGEIISCSQVVICTGTFL 202 Query: 159 RGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQF 218 G IH+G +IPAGR+GD+PS L S F GRL+TGTPARLDGKTI ++ E+Q Sbjct: 203 SGEIHMGLKRIPAGRIGDAPSVGLSASLASAGFKLGRLQTGTPARLDGKTINFEGLERQE 262 Query: 219 ADERLIPFSFMTDKITN--RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCP 276 D +PFS+M K+ N RQI C T TN TH+I+ +N+ H ++ + K GPRYCP Sbjct: 263 GDAEPLPFSYMNSKLDNADRQITCFKTYTNPSTHQIVKDNL-HQCVHIQETKK-GPRYCP 320 Query: 277 SIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIR 336 S+E KI+RFG+++ H ++LEPEG ++DV+YPNGIS +LPEE+Q +RTIPGLEKV I+R Sbjct: 321 SLEAKILRFGDKDHHTVWLEPEGYDSDVIYPNGISCSLPEELQEPMMRTIPGLEKVKIVR 380 Query: 337 PGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKL 396 P Y +EYDYI+P+EL PTLETK+I GLFLAGQINGTTGYEEAAAQG+VAGIN+ + + Sbjct: 381 PAYGVEYDYIDPRELNPTLETKRIKGLFLAGQINGTTGYEEAAAQGIVAGINAGLSALQK 440 Query: 397 DCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCI 456 + +R D + GVMIDDLT KG EPYRMFTSR+EYR+++R DNAD RLT G K G + Sbjct: 441 PPMILTRADGFTGVMIDDLTVKGAEEPYRMFTSRSEYRMTIRSDNADLRLTTKGRKAGVV 500 Query: 457 GERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQ 516 + R +F N + LLKS+ + + S I +DG R AY L YP + Sbjct: 501 SDPRWVKFQDTQATINSVIDLLKSIKFSPQGWSERGIQVNRDGAWRDAYYMLRYPGVTAG 560 Query: 517 NLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPAL 576 + S P+ V+ R+ IE Y + RQ + K +E L+ +Y +P L Sbjct: 561 FMKSFIPELADVDPQVLARVDIEGHYHPHLSRQEADVKMFMEDESLLLDPRMEYREVPGL 620 Query: 577 SNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 S+E+ EKL A +IEGMTP ++ LL Y K+ Sbjct: 621 SSEVVEKLY------RGAAKRIEGMTPTSVVYLLKYAKR 653 >gi|121189|sp|P25756|MNMG_PSEPU RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|581463|emb|CAA44419.1| unnamed protein product [Pseudomonas putida] Length = 630 Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust. Identities = 295/615 (47%), Positives = 387/615 (62%), Gaps = 7/615 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FDVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGHMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREIL-SQENLDVIQGEV 124 G M D +GIQFRVLN +KGPAVR R QADR +Y+ A+ REIL +Q NL + Q Sbjct: 67 GGAMALATDKSGIQFRVLNNRKGPAVRATRAQADRAIYK-AVVREILENQPNLWIFQQNC 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E++ + +V Q +VVLTTGTFL G+IHIG GR GD PS +L + Sbjct: 126 DDLIVEQDQVKGVVTQMGLRFFAESVVLTTGTFLGGLIHIGLQNHSGGRAGDPPSIALAH 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGIT 243 + GRLKTGTP R+DG+++ + +Q D + SFM + ++ RQ+ C IT Sbjct: 186 RMRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFMGNAEMHPRQVSCWIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGLNT Sbjct: 246 HTNARTHEIIASNLDRSPMYSGVIEGVGPRYCPSIEDKIHRFADKESHQVFIEPEGLNTH 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q + +R+I G+E +I+RPGYAIEYDY +P++L +LETK I GL Sbjct: 306 ELYPNGISTSLPFDVQLELVRSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EP Sbjct: 366 FFAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT G +LG I ++R F LKS + Sbjct: 426 YRMFTSRAEYRLILREDNADLRLTEKGRELGLIDDQRWAAFCAKRDGIEREEQRLKSTWV 485 Query: 484 TSKNLSSTSISFKQDGKTRTAYE---FLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 +I K Y L+ P+ L V E+++I + Sbjct: 486 RPNTEQGQAIVDKFGTPLSHEYSLLNLLARPEIDYAGLIE-ATGGEAIDPQVAEQVEIRT 544 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 YA Y RQ E ++ E +P D DY+++ LS E++ KLS +P L QAS+I G Sbjct: 545 KYAGYIDRQQDEIARLRASEDTRLPVDIDYTTISGLSKEIQGKLSQTRPQTLGQASRIPG 604 Query: 601 MTPAALNLLLIYIKK 615 +TPAA++LLLI++KK Sbjct: 605 VTPAAISLLLIHLKK 619 >gi|26986749|ref|NP_742174.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas putida KT2440] gi|38257497|sp|Q88RW8|MNMG_PSEPK RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|24981339|gb|AAN65638.1|AE016190_4 glucose-inhibited division protein A [Pseudomonas putida KT2440] Length = 631 Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust. Identities = 295/615 (47%), Positives = 387/615 (62%), Gaps = 7/615 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 8 FDVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGHMSCNPAIGGIGKSHLVKEIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREIL-SQENLDVIQGEV 124 G M D +GIQFRVLN +KGPAVR R QADR +Y+ A+ REIL +Q NL + Q Sbjct: 68 GGAMALATDKSGIQFRVLNNRKGPAVRATRAQADRAIYK-AVVREILENQPNLWIFQQSC 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E++ + +V Q +VVLTTGTFL G+IHIG GR GD PS +L + Sbjct: 127 DDLIVEQDQVKGVVTQMGLRFFAESVVLTTGTFLGGLIHIGLQNHSGGRAGDPPSIALAH 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGIT 243 + GRLKTGTP R+DG+++ + +Q D + SFM + ++ RQ+ C IT Sbjct: 187 RMRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFMGNAEMHPRQVSCWIT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGLNT Sbjct: 247 HTNARTHEIIASNLDRSPMYSGVIEGVGPRYCPSIEDKIHRFADKESHQVFIEPEGLNTH 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q + +R+I G+E +I+RPGYAIEYDY +P++L +LETK I GL Sbjct: 307 ELYPNGISTSLPFDVQLELVRSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EP Sbjct: 367 FFAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT G +LG I ++R F LKS + Sbjct: 427 YRMFTSRAEYRLILREDNADLRLTEKGRELGLIDDQRWAAFCAKRDGIEREEQRLKSTWV 486 Query: 484 TSKNLSSTSISFKQDGKTRTAYE---FLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 +I K Y L+ P+ L V E+++I + Sbjct: 487 RPNTEQGQAIVDKFGTPLSHEYSLLNLLARPEIDYAGLIE-ATGGEAIDPQVAEQVEIRT 545 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 YA Y RQ E ++ E +P D DY+++ LS E++ KLS +P L QAS+I G Sbjct: 546 KYAGYIDRQQDEIARLRASEDTRLPVDIDYTTISGLSKEIQGKLSQTRPQTLGQASRIPG 605 Query: 601 MTPAALNLLLIYIKK 615 +TPAA++LLLI++KK Sbjct: 606 VTPAAISLLLIHLKK 620 >gi|313496413|gb|ADR57779.1| MnmG [Pseudomonas putida BIRD-1] Length = 630 Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust. Identities = 295/615 (47%), Positives = 387/615 (62%), Gaps = 7/615 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FDVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGHMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREIL-SQENLDVIQGEV 124 G M D +GIQFRVLN +KGPAVR R QADR +Y+ A+ REIL +Q NL + Q Sbjct: 67 GGAMALATDKSGIQFRVLNNRKGPAVRATRAQADRAIYK-AVVREILENQPNLWIFQQSC 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E++ + +V Q +VVLTTGTFL G+IHIG GR GD PS +L + Sbjct: 126 DDLIVEQDQVKGVVTQMGLRFFAESVVLTTGTFLGGLIHIGLQNHSGGRAGDPPSIALAH 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGIT 243 + GRLKTGTP R+DG+++ + +Q D + SFM + ++ RQ+ C IT Sbjct: 186 RMRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFMGNAEMHPRQVSCWIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGLNT Sbjct: 246 HTNARTHEIIASNLDRSPMYSGVIEGVGPRYCPSIEDKIHRFADKESHQVFIEPEGLNTH 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q + +R+I G+E +I+RPGYAIEYDY +P++L +LETK I GL Sbjct: 306 ELYPNGISTSLPFDVQLELVRSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EP Sbjct: 366 FFAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT G +LG I ++R F LKS + Sbjct: 426 YRMFTSRAEYRLILREDNADLRLTEKGRELGLIDDQRWAAFCAKRDGIEREEQRLKSTWV 485 Query: 484 TSKNLSSTSISFKQDGKTRTAYE---FLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 +I K Y L+ P+ L V E+++I + Sbjct: 486 RPNTEQGQAIVDKFGTPLSHEYSLLNLLARPEIDYAGLIE-ATGGEAIDPQVAEQVEIRT 544 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 YA Y RQ E ++ E +P D DY+++ LS E++ KLS +P L QAS+I G Sbjct: 545 KYAGYIDRQQDEIARLRASEDTRLPVDIDYTTISGLSKEIQGKLSQTRPETLGQASRIPG 604 Query: 601 MTPAALNLLLIYIKK 615 +TPAA++LLLI++KK Sbjct: 605 VTPAAISLLLIHLKK 619 >gi|254583203|ref|XP_002499333.1| ZYRO0E09328p [Zygosaccharomyces rouxii] gi|238942907|emb|CAR31078.1| ZYRO0E09328p [Zygosaccharomyces rouxii] Length = 694 Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust. Identities = 281/615 (45%), Positives = 401/615 (65%), Gaps = 18/615 (2%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDG 67 V+V+G GHAGCEAA +A+ GA T LIT + IG+ SCNP++GG+GKG L+RE+DALDG Sbjct: 51 VVVVGAGHAGCEAATGSARTGAPTVLITPFLNKIGTCSCNPSMGGVGKGTLLREVDALDG 110 Query: 68 LMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGF 127 + +V D AGIQF++LN +G AV GPR Q DRE+Y MQ ++ + NL + +G+V Sbjct: 111 VAAKVTDLAGIQFKMLNRSRGAAVWGPRAQIDREIYLREMQNKLNNYPNLRLWEGKVKDL 170 Query: 128 ----------NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 N + ++++D S+++ S VV+TTGTFL IHIG PAGRMG+ Sbjct: 171 IVDIRKNQNSNYTYGAVKGVILEDGSLLKSSKVVITTGTFLSAEIHIGLETFPAGRMGEG 230 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR- 236 + + + F GRLKTGTPARLDG+TI + EKQ+ D+ P S + + ++ + Sbjct: 231 ATYGISETLEDAGFQLGRLKTGTPARLDGRTIDYTHLEKQYGDDPPHPMSLINEDVSIKD 290 Query: 237 QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLE 296 Q+ C T TNL H I N+ + IK GPRYCPSIE KI+RF +++ H+I+LE Sbjct: 291 QVLCYGTYTNLGLHDYIRSNLHRAMHIRETIK--GPRYCPSIEAKILRFSDKDSHRIWLE 348 Query: 297 PEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLE 356 PEGLNTDV+YPNGIS ++PE++Q Q +R IPGLE V I++P Y +EYDY++P++L TLE Sbjct: 349 PEGLNTDVIYPNGISNSMPEDVQIQMMRMIPGLENVEILQPAYGVEYDYVDPRQLRQTLE 408 Query: 357 TKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 TK ISGL+LAGQINGTTGYEEA AQG+VAGIN+ + + SR+D+YIGV+IDDL Sbjct: 409 TKLISGLYLAGQINGTTGYEEACAQGVVAGINAGLLHMNREPLKLSRSDAYIGVLIDDLI 468 Query: 417 SKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRS 476 +KGV EPYRMFTSR+E+R+S+R DNAD RLT +G KLG +G+ R F Y +Y + S Sbjct: 469 TKGVEEPYRMFTSRSEFRVSVRADNADFRLTELGRKLGVVGDDRWSIFQSYKNQYLNIES 528 Query: 477 LLKSLVLTSKNLSS-TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICP----DARKFSSL 531 LK L+++ ++ +I K R+A+E + +++ + P D + Sbjct: 529 KLKDFNLSARKWTNLLNIQVADSAKNRSAWELFRFNGVTLEKMMEAVPELGIDINELPRH 588 Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 V+ ++ ++ Y+ Y RQ K + +E ++P++FDYS LP+LS E K L+ ++P Sbjct: 589 VLVKVNVQGKYSPYISRQNQYVKAFQADENMVLPQNFDYSQLPSLSFECKTLLNTIQPET 648 Query: 592 LLQASKIEGMTPAAL 606 + QA +I+G+T A+L Sbjct: 649 IGQARRIQGITAASL 663 >gi|50593214|ref|NP_011278.2| Mto1p [Saccharomyces cerevisiae S288c] gi|115502421|sp|P53070|MTO1_YEAST RecName: Full=Mitochondrial translation optimization protein 1; Flags: Precursor gi|256272512|gb|EEU07492.1| Mto1p [Saccharomyces cerevisiae JAY291] gi|285811982|tpg|DAA07882.1| TPA: Mto1p [Saccharomyces cerevisiae S288c] Length = 669 Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust. Identities = 282/617 (45%), Positives = 402/617 (65%), Gaps = 19/617 (3%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDG 67 V+VIG GHAGCEAAA +++ GA T LIT + IG SCNP+IGG+GKG LV+EIDALDG Sbjct: 39 VVVIGAGHAGCEAAAASSRTGAHTTLITPSLTDIGKCSCNPSIGGVGKGILVKEIDALDG 98 Query: 68 LMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQE---NLDVIQGEV 124 LMG+V D AG+QF++LN KGPAV GPR Q DRELY+ MQRE+ ++ NL ++Q +V Sbjct: 99 LMGKVTDLAGVQFKMLNRSKGPAVWGPRAQIDRELYKKYMQRELSDKKAHPNLSLLQNKV 158 Query: 125 AGF-----NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 A +I +V+ D + + V++TTGTFL IHIG +I AGR+G+ P+ Sbjct: 159 ADLILYDPGCGHKVIKGVVLDDGTQVGADQVIITTGTFLSAEIHIGDKRIAAGRIGEQPT 218 Query: 180 NSLFNSFM-KFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT---N 235 + N+ + F GRLKTGTPARL ++I + E Q D +P SF+ + ++ Sbjct: 219 YGISNTLQNEVGFQLGRLKTGTPARLAKESIDFSALEVQKGDALPVPMSFLNETVSVEPT 278 Query: 236 RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFL 295 +Q++C T T + H + N+ H +I+ D GPRYCPSIE KI+RF +R+ H+I+L Sbjct: 279 KQLDCFGTHTTPQMHDFLRNNL-HQSIHIQDTTIKGPRYCPSIEAKILRFPDRSSHKIWL 337 Query: 296 EPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTL 355 EPEG N+DV+YPNGIS ++PE++Q Q +R IPG+ V I++P Y +EYDY++P++L P+L Sbjct: 338 EPEGFNSDVIYPNGISNSMPEDVQLQMMRLIPGMANVEILQPAYGVEYDYVDPRQLKPSL 397 Query: 356 ETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKS-NKLDCICFSRTDSYIGVMIDD 414 ETK + GLFLAGQINGTTGYEEAAAQG++AGIN+ S + + + R+++YIGV+IDD Sbjct: 398 ETKLVDGLFLAGQINGTTGYEEAAAQGIIAGINAGLLSRQEREQLVLKRSEAYIGVLIDD 457 Query: 415 LTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFL 474 L + GV+EPYRMFTSR+E+RIS+R DNAD RLTPIG +LG I R ++++ Y+ Sbjct: 458 LINNGVIEPYRMFTSRSEFRISVRADNADFRLTPIGAQLGIISPVRLSQYSRDKHLYDET 517 Query: 475 RSLLKSLVLTSKNLSS-TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDAR----KFS 529 L++ L+S+ SS + + R+A+E + D + L+ PD Sbjct: 518 IRALQNFKLSSQKWSSLLQANIAPQAENRSAWEIFRFKDMDLHKLYECIPDLPINLLDIP 577 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 V+ ++ I+ Y Y +Q K + +E L+P+D+DY LP LS E K L+ ++P Sbjct: 578 MHVVTKINIQGKYEPYIVKQNQFVKAFQADENMLLPQDYDYRQLPTLSTECKLLLNRVQP 637 Query: 590 FNLLQASKIEGMTPAAL 606 + QA +I+G+T AAL Sbjct: 638 LTIGQARRIQGITAAAL 654 >gi|161611314|ref|YP_163716.2| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Zymomonas mobilis subsp. mobilis ZM4] gi|292495074|sp|Q5NL05|MNMG_ZYMMO RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|283775607|gb|AAV90605.2| glucose inhibited division protein A [Zymomonas mobilis subsp. mobilis ZM4] Length = 621 Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust. Identities = 288/613 (46%), Positives = 400/613 (65%), Gaps = 2/613 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D++VIGGGHAGCEAAAVAA++GA TAL+T + IG+MSCNPAIGGLGKGHLVREIDA Sbjct: 11 FDIVVIGGGHAGCEAAAVAARMGAKTALVTMDSEQIGAMSCNPAIGGLGKGHLVREIDAW 70 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGLM AD A I +R+LN KG AV+GPR QADR Y+ A+Q + Q +L +I+G Sbjct: 71 DGLMPHAADYAAIHYRMLNRSKGSAVQGPRIQADRNRYKKAIQTALKEQAHLTIIEGMAE 130 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 F +K + ++++ D ++ +VVLTTGTFL + G+ K GR+G+ PS L Sbjct: 131 SFQMDKGKVKAVLLADGRPLKTESVVLTTGTFLDAWLFCGEKKWRGGRIGEQPSIGLAEQ 190 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 D GRLKTGTPARLDG+TI W + ++Q +DE + QI C +TR+ Sbjct: 191 LKALDLPLGRLKTGTPARLDGRTIDWARLQRQPSDEDAWTMASYGAGRVAPQIACSLTRS 250 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N +TH II + S ++SG I+ GPRYCPSIEDKI++FG+R+GHQIFLEPEGL+T ++ Sbjct: 251 NQKTHDIIRAGLDRSPLFSGAIEGRGPRYCPSIEDKIMKFGDRDGHQIFLEPEGLDTPLI 310 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YPNGIST+LPE++Q FI +I GLE I++ GYA+EY++I+P+ L LE K + +F Sbjct: 311 YPNGISTSLPEDVQQAFINSIEGLENTKIVQFGYAVEYEFIDPRSLTHQLELKALKSVFC 370 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAAAQGLVAGI++A F R +SYIGVMIDDL +GV EPYR Sbjct: 371 AGQINGTTGYEEAAAQGLVAGISAACAVAGKAPPVFDRRNSYIGVMIDDLVLQGVTEPYR 430 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 M T+RAEYR+ LR DNA RL+ G +G K + E + LL+ +S Sbjct: 431 MLTARAEYRLGLRADNAVTRLSGQAKAFGALGAEMTDFVTKRLAEREKCQKLLEK-AASS 489 Query: 486 KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAY 545 +++ + + + G + + +E+L +P + Q+L ++ P+ +FS V+ + + YA Y Sbjct: 490 RDMQAVGANVTE-GASHSLFEWLRFPAVTRQHLEALIPELTEFSDAVVSEIIDDGRYAPY 548 Query: 546 TGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAA 605 RQ E + + +P + DY+++ LSNE+ EK S +P ++ AS++ G+TPAA Sbjct: 549 LERQDAELARLAGHDNMPLPAELDYATIAGLSNEMVEKFSAARPPDMASASRVRGVTPAA 608 Query: 606 LNLLLIYIKKNTV 618 L +LI+ KK T+ Sbjct: 609 LAAILIHAKKVTL 621 >gi|77461958|ref|YP_351465.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas fluorescens Pf0-1] gi|123602667|sp|Q3K430|MNMG_PSEPF RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|77385961|gb|ABA77474.1| glucose inhibited division protein A [Pseudomonas fluorescens Pf0-1] Length = 632 Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust. Identities = 295/617 (47%), Positives = 391/617 (63%), Gaps = 9/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++GA T L+TH T+G+MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIVIGGGHAGTEAALASARMGAKTLLLTHNVETLGAMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREIL-SQENLDVIQGEV 124 G M D GIQFRVLN +KGPAVR R QADR LY+ A+ REIL +Q NL + Q Sbjct: 67 GGAMAMATDLGGIQFRVLNSRKGPAVRATRAQADRILYKAAV-REILENQPNLWIFQQAA 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E+ + +V Q +VVLTTGTFL G+IHIG GR GD PS +L + Sbjct: 126 DDLIVEQEQVRGVVTQMGLRFFADSVVLTTGTFLGGLIHIGLQNFSGGRAGDPPSIALAH 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 + GRLKTGTP R+DGK++ + +Q D + SFM +K + RQ+ C IT Sbjct: 186 RLRELPLRVGRLKTGTPPRIDGKSVDFSVMTEQPGDTPIPVMSFMGNKEQHPRQVSCWIT 245 Query: 244 RTNLETHRIIMENIKHSAIYS--GDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 TN TH II N+ S +YS G+I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL Sbjct: 246 HTNARTHEIIAANLDRSPMYSAAGEIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLT 305 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T +YPNGIST+LP ++Q Q +++I G+E +I+RPGYAIEYDY +P++L +LETK I Sbjct: 306 THELYPNGISTSLPFDVQLQIVQSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIG 365 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQINGTTGYEEA AQGL+AG N+A ++ + C R ++YIGV++DDL + G Sbjct: 366 GLFFAGQINGTTGYEEAGAQGLLAGANAALRAKGKEAWCPRRDEAYIGVLVDDLITLGTQ 425 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+ LR DNAD RLT G +LG + + R F K + LKS Sbjct: 426 EPYRMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCKKRESIELEEQRLKST 485 Query: 482 VLTSKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 + +I+ K Y LS P+ L + + V E+++I Sbjct: 486 WVRPGTQQGDAIAEKFGTPLTHEYNLLNLLSRPEIDYAGLVEVTGLGAE-DPQVAEQVEI 544 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 ++ YA Y RQ E ++ E +P D DY+++ LS E++ KL +P L QAS+I Sbjct: 545 KTKYAGYIDRQQDEIARLRASEDTKLPVDIDYTNISGLSKEIQSKLGATRPETLGQASRI 604 Query: 599 EGMTPAALNLLLIYIKK 615 G+TPAA++LL+I++KK Sbjct: 605 PGVTPAAISLLMIHLKK 621 >gi|152980753|ref|YP_001355329.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Janthinobacterium sp. Marseille] gi|166222939|sp|A6T482|MNMG_JANMA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|151280830|gb|ABR89240.1| glucose inhibited division protein A [Janthinobacterium sp. Marseille] Length = 645 Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust. Identities = 298/627 (47%), Positives = 400/627 (63%), Gaps = 14/627 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++G ST L++H T+G MSCNP+IGG+GKGHLV+E+DA+ Sbjct: 7 FDVIVVGGGHAGTEAALASARMGQSTLLLSHNIETLGQMSCNPSIGGIGKGHLVKEVDAM 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D AGIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 67 GGAMAIATDEAGIQFRILNSSKGPAVRATRAQADRILYKQAIRSRLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q VVLT GTFL G IH+G AGR GD P+ SL Sbjct: 127 DLLVEGDRVIGAVTQVGIKFYARAVVLTAGTFLDGKIHVGLNNYSAGRAGDPPAISLSAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTD-KITNRQIECGIT 243 + GRLKTGTP R+DG++I + ++Q D IP FS M + +Q+ C IT Sbjct: 187 LKELKLPQGRLKTGTPPRIDGRSIDFSVMQEQPGDLDPIPVFSVMGSVAMHPKQMPCWIT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T+ Sbjct: 247 HTNEKTHDLIRSGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFAGKDSHQIFLEPEGLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP +IQ ++++ GLE +I+RPGYAIEYDY +P+ L TLETK I GL Sbjct: 307 EFYPNGISTSLPFDIQLALVQSMRGLEHAHILRPGYAIEYDYFDPRGLKSTLETKVIQGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQG++AGIN+A ++ + D R ++Y+GVM+DDL +KGVLEP Sbjct: 367 FFAGQINGTTGYEEAAAQGMLAGINAALQTQERDAWTPRRDEAYLGVMVDDLITKGVLEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF----AKYIQEYNFLRSLLK 479 YRMFTSRAEYR+SLR DNAD RLT IG +LGC+G+ + F +E LRS Sbjct: 427 YRMFTSRAEYRLSLREDNADMRLTEIGRQLGCVGDAQWAVFETKREAVARELERLRSTWV 486 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI-CPDARKFSS------LV 532 S + ++ + + K + + L P+ S + L S+ D + + V Sbjct: 487 SPRILAEA-EAERVLGKGIEREYALADLLRRPNVSYETLMSLKGVDGQDLAGPGVAEDAV 545 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 E+++I+ YA Y RQ E + + E +P++FDY + LS E+++KL KP L Sbjct: 546 REQVEIQLKYAGYIDRQAKEVERHDYYENLKLPQEFDYMEVKGLSFEVRQKLCKHKPETL 605 Query: 593 LQASKIEGMTPAALNLLLIYIKKNTVK 619 QAS+I G+TPAA++LLL+++KK K Sbjct: 606 GQASRISGVTPAAISLLLVHLKKGGFK 632 >gi|151943582|gb|EDN61892.1| mitochondrial protein [Saccharomyces cerevisiae YJM789] gi|190407169|gb|EDV10436.1| mitochondrial translation optimization protein [Saccharomyces cerevisiae RM11-1a] gi|207345557|gb|EDZ72335.1| YGL236Cp-like protein [Saccharomyces cerevisiae AWRI1631] gi|259146278|emb|CAY79535.1| Mto1p [Saccharomyces cerevisiae EC1118] Length = 669 Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust. Identities = 282/617 (45%), Positives = 402/617 (65%), Gaps = 19/617 (3%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDG 67 V+VIG GHAGCEAAA +++ GA T LIT + IG SCNP+IGG+GKG LV+EIDALDG Sbjct: 39 VVVIGAGHAGCEAAAASSRTGAHTTLITPSLTDIGKCSCNPSIGGVGKGILVKEIDALDG 98 Query: 68 LMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQE---NLDVIQGEV 124 LMG+V D AG+QF++LN KGPAV GPR Q DRELY+ MQRE+ ++ NL ++Q +V Sbjct: 99 LMGKVTDLAGVQFKMLNRSKGPAVWGPRAQIDRELYKKYMQRELSDKKAHPNLSLLQNKV 158 Query: 125 AGF-----NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 A +I +V+ D + + V++TTGTFL IHIG +I AGR+G+ P+ Sbjct: 159 ADLILYDPGCGHKVIKGVVLDDGTQVGADQVIITTGTFLSAEIHIGDKRIAAGRIGEQPT 218 Query: 180 NSLFNSFM-KFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT---N 235 + N+ + F GRLKTGTPARL ++I + E Q D+ +P SF+ + ++ Sbjct: 219 YGISNTLQNEVGFQLGRLKTGTPARLAKESIDFSALEVQKGDKLPVPMSFLNETVSVEPT 278 Query: 236 RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFL 295 +Q++C T T + H + N+ H +I+ D GPRYCPSIE KI+RF +R+ H+I+L Sbjct: 279 KQLDCFGTHTTPQMHDFLRNNL-HQSIHIQDTTIKGPRYCPSIEAKILRFPDRSSHKIWL 337 Query: 296 EPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTL 355 EPEG N+DV+YPNGIS ++PE++Q Q +R IPG+ V I++P Y +EYDY++P++L P+L Sbjct: 338 EPEGFNSDVIYPNGISNSMPEDVQLQMMRLIPGMANVEILQPAYGVEYDYVDPRQLKPSL 397 Query: 356 ETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKS-NKLDCICFSRTDSYIGVMIDD 414 ETK + GLFLAGQINGTTGYEEAAAQG++AGIN+ S + + + R+ +YIGV+IDD Sbjct: 398 ETKLVDGLFLAGQINGTTGYEEAAAQGIIAGINAGLLSRQEREQLVLKRSQAYIGVLIDD 457 Query: 415 LTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFL 474 L + GV+EPYRMFTSR+E+RIS+R DNAD RLTPIG +LG I R ++++ Y+ Sbjct: 458 LINNGVIEPYRMFTSRSEFRISVRADNADFRLTPIGAQLGIISPVRLSQYSRDKHLYDET 517 Query: 475 RSLLKSLVLTSKNLSS-TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDAR----KFS 529 L++ L+S+ SS + + R+A+E + D + L+ PD Sbjct: 518 IRALQNFKLSSQKWSSLLQANIAPQAENRSAWEIFRFKDMDLHKLYECIPDLPINLLDIP 577 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 V+ ++ I+ Y Y +Q K + +E L+P+D+DY LP LS E K L+ ++P Sbjct: 578 MHVVTKINIQGKYEPYIVKQNQFVKAFQADENMLLPQDYDYRQLPTLSTECKLLLNRVQP 637 Query: 590 FNLLQASKIEGMTPAAL 606 + QA +I+G+T AAL Sbjct: 638 LTIGQARRIQGITAAAL 654 >gi|91795108|ref|YP_564759.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shewanella denitrificans OS217] gi|123165631|sp|Q12HP0|MNMG_SHEDO RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|91717110|gb|ABE57036.1| glucose inhibited division protein A [Shewanella denitrificans OS217] Length = 629 Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust. Identities = 296/617 (47%), Positives = 389/617 (63%), Gaps = 9/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++G+ T L+TH T+G MSCNPAIGG+GKGHLV+EIDAL Sbjct: 7 FDVIVVGGGHAGTEAALASARMGSKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D AGIQFR LN KGPAVR R QADR LYR +Q+ + SQ NL + Q V Sbjct: 67 GGAMAIATDFAGIQFRTLNSSKGPAVRATRAQADRALYRQKIQQILQSQPNLRIFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E N + +V Q TVVLTTGTFL G IHIG GR GD P+ +L N Sbjct: 127 DLVVENNQVVGVVTQMGLAFESPTVVLTTGTFLSGKIHIGMQNYSGGRAGDPPAIALANR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +I + + +Q D L SF+ + + RQI C IT Sbjct: 187 LRELPIRVGRLKTGTPPRIDANSIDFSQMTEQKGDTPLPVMSFVGNVDQHPRQISCHITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH II + S +YSG I+ GPRYCPSIEDKI RF ++ HQIF+EPEGL+T+ Sbjct: 247 TNEKTHDIIRGGLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKTSHQIFIEPEGLSTNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q +R+I G+E IIRPGYAIEYDY +P++L +LETK I+GLF Sbjct: 307 IYPNGISTSLPFDVQLNLVRSIKGMENAEIIRPGYAIEYDYFDPRDLKNSLETKTINGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG+N++ + + C R +Y+GV++DDL++ G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGMNASLQVQGKETWCPRRDQAYLGVLVDDLSTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQ--EYNFLRSLLKSLV 482 RMFTSRAEYR+ LR DNAD RLT G +LG + + R +F + + E R + + Sbjct: 427 RMFTSRAEYRLLLREDNADLRLTEKGRELGLVNDDRWAKFTEKRESIELELQRLRGQWIH 486 Query: 483 LTSKNLSSTSISFKQDGKTRTAYE-FLSYPDFSIQNLFSI---CPDARKFSSLVIERLQI 538 S L + ++E L P+ Q L S+ P S+ E++QI Sbjct: 487 PNSPLLGVLNPELNTPISREASFEDLLRRPEMDYQKLMSLEGFGPGLEDPSA--AEQVQI 544 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + Y+ Y RQ E + E L+P D DY +P LSNE+ KL+ KP + QAS+I Sbjct: 545 QVKYSGYIQRQQDEIDKAIRHENSLLPLDLDYQEVPGLSNEVIAKLNNHKPDTIGQASRI 604 Query: 599 EGMTPAALNLLLIYIKK 615 G+TPAA+++LL+++KK Sbjct: 605 SGITPAAISILLVHLKK 621 >gi|195436196|ref|XP_002066055.1| GK22159 [Drosophila willistoni] gi|194162140|gb|EDW77041.1| GK22159 [Drosophila willistoni] Length = 656 Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust. Identities = 288/630 (45%), Positives = 411/630 (65%), Gaps = 23/630 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVI+IGGGHAG EA++ AA++GA T L+THK TIG MSCNP+ GG+GKGHL+RE+DAL Sbjct: 29 YDVIIIGGGHAGTEASSAAARMGARTLLLTHKLETIGEMSCNPSFGGIGKGHLMREVDAL 88 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DG+ R D +G+ ++VLN ++GPAV GPR Q DR+LY+ A+Q+E+ + +NL++ V Sbjct: 89 DGVCARCCDVSGVHYKVLNRRRGPAVWGPRAQIDRQLYKKAVQKELGNTKNLEISAAAVD 148 Query: 126 GFNTEKN-IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + +++ + +R +VVLTTGTFLR I+IG PAGR+GD P+ +L Sbjct: 149 NLIVEDDKHCKGVLLANGEEVRSHSVVLTTGTFLRAHINIGLEVRPAGRIGDKPAQALGE 208 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI---TNRQIECG 241 + + F GRLKTGTP R+ +I + + ++ D PFSF+ K+ + QI C Sbjct: 209 AIDRLGFRMGRLKTGTPPRIAKDSINFSQLQRHDGDNPPNPFSFLNKKVWLNADEQIPCY 268 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T T + I+ +N+ + + +I GPRYCPSIE KI+RFGE+ HQ++LEPEG + Sbjct: 269 LTYTTPKVSNIVRDNLHVNRHVTEEIT--GPRYCPSIESKILRFGEKV-HQVWLEPEGFD 325 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 ++YP GIS LP E Q + + I GLEK +++PGY +EYDYI+P+EL+PTLETK++S Sbjct: 326 NPLIYPQGISCTLPFEQQIELVHAIKGLEKAEVVQPGYGVEYDYIDPRELYPTLETKRVS 385 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKS---NKLDCICFSRTDSYIGVMIDDLTSK 418 GLF AGQINGTTGYEEAAAQG+VAG N+A K+ N + SRT+ YIGV+IDDLTS Sbjct: 386 GLFFAGQINGTTGYEEAAAQGIVAGANAAGKTLHQNDGKQLTISRTEGYIGVLIDDLTSL 445 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYRMFTSRAE+R+SLRPDNAD RLT G G + E+R + F + + L Sbjct: 446 GTNEPYRMFTSRAEFRLSLRPDNADMRLTRKGYDFGLVSEQRYRHFQQTFDKIQAGIEAL 505 Query: 479 KSLVLTSKNL-SSTSISFKQDGKTRTAYEFLSYP--DFSIQNLFSIC------PDARKFS 529 K+L S SS + + +TA+E L P + +++ L +C PD K S Sbjct: 506 KNLKKHSNFWRSSLGLPTAKASVEKTAFEMLGIPADNITVEQLLQLCPGELSWPDCDKAS 565 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDY-SSLPALSNELKEKLSILK 588 S ER++IE+ Y+ + Q + E++ EE+ IP D DY S +LSNE ++KL++++ Sbjct: 566 S---ERIKIEALYSFFVAEQQRDVDEVRREERLAIPSDIDYFSKTLSLSNEERQKLALIQ 622 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIKKNTV 618 P + AS+I+G+TP+ + L+ Y+K+ + Sbjct: 623 PLTIAAASRIQGVTPSTIVRLMKYVKRTEI 652 >gi|87198162|ref|YP_495419.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Novosphingobium aromaticivorans DSM 12444] gi|123491123|sp|Q2GC38|MNMG_NOVAD RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|87133843|gb|ABD24585.1| glucose inhibited division protein A [Novosphingobium aromaticivorans DSM 12444] Length = 619 Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust. Identities = 283/614 (46%), Positives = 403/614 (65%), Gaps = 2/614 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +D+IV+GGGHAG EAAAVAA++GA TAL++ TIG+MSCNPAIGGLGKGHLVRE+D Sbjct: 2 QQFDIIVVGGGHAGVEAAAVAARMGARTALVSFDPQTIGAMSCNPAIGGLGKGHLVREVD 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDGL+ R ADA+ I +R+LN KG AV+GPR QADR+ ++ A+Q+ I +Q +L V+ GE Sbjct: 62 ALDGLIARAADASAIHYRMLNRSKGSAVQGPRVQADRKRFKAAIQKMIAAQPDLHVVGGE 121 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 VA E+ ++ + + D + + VVL TGTFL G + G+ ++ GR+G+ ++ L Sbjct: 122 VAALRLEQGRVTGVDLADGTALAGRAVVLCTGTFLGGRLFRGEERMDGGRIGEDSAHRLA 181 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + RLKTGTP R+DG+TI W + +Q +D+ S +T Q+ C I Sbjct: 182 AQLRDAELPMARLKTGTPPRIDGRTIDWARLPEQPSDDDPWTMSPLTPARPLPQVFCAIA 241 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 RTN TH II + S +++G I + GPRYCPSIEDKI RFG+R+GHQ+FLEPEGL+ Sbjct: 242 RTNARTHEIIRGGLDRSPLFTGAIGAQGPRYCPSIEDKIHRFGDRDGHQVFLEPEGLDDF 301 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNG+ST+LP ++Q IR++ GLE+ I PGYA+EYD+I+P+ L +LE K I GL Sbjct: 302 TVYPNGVSTSLPTDVQVAMIRSMEGLEQAVITVPGYAVEYDHIDPRALRRSLEVKAIPGL 361 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGTTGYEEAAAQGL+AG+++A R +SY+ VMIDDLT GV EP Sbjct: 362 YCAGQINGTTGYEEAAAQGLIAGMHAAAHVLGRAMPELDRANSYMAVMIDDLTLHGVSEP 421 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRM T+RAEYR+ LR +NA +RLTPIG+ +GCIG+ R+K F Q + L + L Sbjct: 422 YRMLTARAEYRLRLRANNAASRLTPIGLAIGCIGDERRKWFEDRSQARSRLETALAQPA- 480 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 T L+ I + DG R+ E+L +P+ ++ L + F L++E ++ +++YA Sbjct: 481 TPTELNRAGIPVRADGARRSLMEWLRFPEVTLDGLRDWIGN-EPFDPLLVEEVEEDAAYA 539 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y RQ E ++++ + + F ++ +P LS E+ E+L +P +L A +I G+TP Sbjct: 540 PYLARQDAELRDLRASDAVPLGDGFPFADVPGLSREMVERLERAQPDSLAAAGRIAGITP 599 Query: 604 AALNLLLIYIKKNT 617 AAL LL++ ++ Sbjct: 600 AALASLLVHARRRA 613 >gi|330447281|ref|ZP_08310931.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491472|dbj|GAA05428.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 629 Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust. Identities = 293/616 (47%), Positives = 395/616 (64%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALAAARMGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D GIQFR LN KGPAVR R QADR LY+ A++ + +QENL + Q V Sbjct: 67 GGLMAKAIDKGGIQFRTLNSSKGPAVRATRAQADRALYKAAVRNVLENQENLMIFQQAVT 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + +V + R TVVLT GTFL G IHIG GR GD S +L + Sbjct: 127 DLIVENDRAAGVVTEMGLKFRSKTVVLTVGTFLGGKIHIGLENYSGGRTGDPASIALADR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +++ + E Q D FSFM + + RQI C IT Sbjct: 187 LRELPLRVDRLKTGTPPRIDARSVDFSVLETQHGDNPTPTFSFMGKQSDHPRQIPCFITY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEGL T+ Sbjct: 247 TNERTHEVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEGLTTNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G E I+RPGYAIEYD+ +P++L T E K I GLF Sbjct: 307 LYPNGISTSLPFDVQMQIVRSMKGFENATIVRPGYAIEYDFFDPRDLKQTFENKYIDGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+A ++ + R ++Y+GV+IDDL++ G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLMAGMNAALQAQDKEGWSPRRDEAYMGVLIDDLSTIGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLTP G +LG + + R RF + ++ R LK + + Sbjct: 427 RMFTSRAEYRLLLREDNADLRLTPKGRELGLVDDERWARFNQKLENMELERQRLKDIWIN 486 Query: 485 SKNLSSTSIS-FKQDGKTRTAY--EFLSYPDFSIQNLFSICPDARKFSSL-VIERLQIES 540 K+ ++ + TR A + L P+ S + L +I A + E+++I+ Sbjct: 487 PKSDHVDELNKILKAPITREASGEDLLRRPEVSYEQLTAIETFAPAHEDVEAREQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ EK +P D DYS + LSNE+ KL+ KP ++ AS+I G Sbjct: 547 KYQGYIDRQREEVEKSLRHEKTKLPFDLDYSQVKGLSNEVVAKLTDAKPESIGMASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA++LLL+Y+KK+ Sbjct: 607 ITPAAISLLLVYLKKH 622 >gi|1322897|emb|CAA96953.1| unnamed protein product [Saccharomyces cerevisiae] Length = 679 Score = 556 bits (1434), Expect = e-156, Method: Compositional matrix adjust. Identities = 282/617 (45%), Positives = 402/617 (65%), Gaps = 19/617 (3%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDG 67 V+VIG GHAGCEAAA +++ GA T LIT + IG SCNP+IGG+GKG LV+EIDALDG Sbjct: 39 VVVIGAGHAGCEAAAASSRTGAHTTLITPSLTDIGKCSCNPSIGGVGKGILVKEIDALDG 98 Query: 68 LMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQE---NLDVIQGEV 124 LMG+V D AG+QF++LN KGPAV GPR Q DRELY+ MQRE+ ++ NL ++Q +V Sbjct: 99 LMGKVTDLAGVQFKMLNRSKGPAVWGPRAQIDRELYKKYMQRELSDKKAHPNLSLLQNKV 158 Query: 125 AGF-----NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 A +I +V+ D + + V++TTGTFL IHIG +I AGR+G+ P+ Sbjct: 159 ADLILYDPGCGHKVIKGVVLDDGTQVGADQVIITTGTFLSAEIHIGDKRIAAGRIGEQPT 218 Query: 180 NSLFNSFM-KFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT---N 235 + N+ + F GRLKTGTPARL ++I + E Q D +P SF+ + ++ Sbjct: 219 YGISNTLQNEVGFQLGRLKTGTPARLAKESIDFSALEVQKGDALPVPMSFLNETVSVEPT 278 Query: 236 RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFL 295 +Q++C T T + H + N+ H +I+ D GPRYCPSIE KI+RF +R+ H+I+L Sbjct: 279 KQLDCFGTHTTPQMHDFLRNNL-HQSIHIQDTTIKGPRYCPSIEAKILRFPDRSSHKIWL 337 Query: 296 EPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTL 355 EPEG N+DV+YPNGIS ++PE++Q Q +R IPG+ V I++P Y +EYDY++P++L P+L Sbjct: 338 EPEGFNSDVIYPNGISNSMPEDVQLQMMRLIPGMANVEILQPAYGVEYDYVDPRQLKPSL 397 Query: 356 ETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKS-NKLDCICFSRTDSYIGVMIDD 414 ETK + GLFLAGQINGTTGYEEAAAQG++AGIN+ S + + + R+++YIGV+IDD Sbjct: 398 ETKLVDGLFLAGQINGTTGYEEAAAQGIIAGINAGLLSRQEREQLVLKRSEAYIGVLIDD 457 Query: 415 LTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFL 474 L + GV+EPYRMFTSR+E+RIS+R DNAD RLTPIG +LG I R ++++ Y+ Sbjct: 458 LINNGVIEPYRMFTSRSEFRISVRADNADFRLTPIGAQLGIISPVRLSQYSRDKHLYDET 517 Query: 475 RSLLKSLVLTSKNLSS-TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDAR----KFS 529 L++ L+S+ SS + + R+A+E + D + L+ PD Sbjct: 518 IRALQNFKLSSQKWSSLLQANIAPQAENRSAWEIFRFKDMDLHKLYECIPDLPINLLDIP 577 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 V+ ++ I+ Y Y +Q K + +E L+P+D+DY LP LS E K L+ ++P Sbjct: 578 MHVVTKINIQGKYEPYIVKQNQFVKAFQADENMLLPQDYDYRQLPTLSTECKLLLNRVQP 637 Query: 590 FNLLQASKIEGMTPAAL 606 + QA +I+G+T AAL Sbjct: 638 LTIGQARRIQGITAAAL 654 >gi|284097362|ref|ZP_06385486.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Candidatus Poribacteria sp. WGA-A3] gi|283831127|gb|EFC35113.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Candidatus Poribacteria sp. WGA-A3] Length = 625 Score = 556 bits (1434), Expect = e-156, Method: Compositional matrix adjust. Identities = 288/612 (47%), Positives = 387/612 (63%), Gaps = 3/612 (0%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALD 66 D+IVIGGGHAGCEAA AA++G L+T I M CNPA+GG+GKGHLV+EIDAL Sbjct: 6 DIIVIGGGHAGCEAALAAARMGCRVLLLTIDQDMIAHMPCNPAVGGIGKGHLVKEIDALG 65 Query: 67 GLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAG 126 G +GR D AGIQFR+LN +KGPAVR R Q D+ LYR AMQ + Q NL+++ G Sbjct: 66 GEIGRNTDKAGIQFRMLNTRKGPAVRATRVQCDKALYRKAMQDTLAHQPNLEIVSGTANR 125 Query: 127 FNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSF 186 T+ I +V + V++T+GTFL+G+IHIG +P GR G++P+ L + Sbjct: 126 LLTKGGTIRGVVTDSGETVHAEAVIITSGTFLKGLIHIGMSHMPGGRAGEAPAEHLSDCM 185 Query: 187 MKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTN 246 F F+ GRLKTGTP RLD TI + +Q D PFSF T +ITN QI C +T TN Sbjct: 186 RDFGFEVGRLKTGTPPRLDRDTIDFSVMGEQPGDVPPRPFSFRTTRITNPQICCHLTYTN 245 Query: 247 LETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVY 306 TH II N+ S +Y G I S GPRYCPSIEDK+VRF ++ HQIF+EPE L++ Y Sbjct: 246 ERTHDIIRNNLDRSPMYMGVIDSTGPRYCPSIEDKVVRFEDKTQHQIFVEPEELDSPSFY 305 Query: 307 PNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLA 366 PNGIST+LP ++Q ++TIPGL++ +++PGYAIEYDY P +L TLETK + GL+ A Sbjct: 306 PNGISTSLPVDVQAALLKTIPGLDRATMLKPGYAIEYDYFPPYQLHQTLETKNVKGLYHA 365 Query: 367 GQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRM 426 GQINGT+GYEEAAAQG++AGIN+A + + R+ +YIGV+IDDL +K EPYRM Sbjct: 366 GQINGTSGYEEAAAQGIMAGINAALQVKGEPPLILDRSQAYIGVLIDDLITKDAREPYRM 425 Query: 427 FTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF--AKYIQEYNFLRSLLKSLVLT 484 FTSRAEYR+ LR DNAD RL G +LG + + +F + + E LR L T Sbjct: 426 FTSRAEYRLLLREDNADQRLMDTGHRLGLVSDDLHAKFEEKQRVVENEKLRLSQTRLPWT 485 Query: 485 SKNLSS-TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 + T I K T + L P+ S L I +A ++ + E ++I Y Sbjct: 486 PEQAERWTRIEPKMPDPGATMAQLLKRPEVSYTRLMDIAGEANPANTKIGEAVEIAIKYD 545 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y RQ+ + ++ + E + IP +F Y + SNE+ EKLS ++P + QAS+I GMTP Sbjct: 546 GYIKRQLDQIEKFQKLEGKSIPSNFRYDRVTGFSNEVAEKLSKIRPATVGQASRISGMTP 605 Query: 604 AALNLLLIYIKK 615 AA++LLL+ +++ Sbjct: 606 AAISLLLVALER 617 >gi|152984868|ref|YP_001351678.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas aeruginosa PA7] gi|166222720|sp|A6VF43|MNMG_PSEA7 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|150960026|gb|ABR82051.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas aeruginosa PA7] Length = 631 Score = 556 bits (1433), Expect = e-156, Method: Compositional matrix adjust. Identities = 293/614 (47%), Positives = 385/614 (62%), Gaps = 5/614 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 8 FDVIVIGGGHAGTEAALAAARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 68 GGAMAEATDKGGIQFRILNSRKGPAVRATRAQADRVLYKAAIRHTLENQPNLWIFQQACD 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 128 DLIVEQDQVRGVVTQMGLRFHADNVVLTTGTFLGGLIHIGLENYSGGRAGDPPSIALARR 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+DG+++++ +Q D + SF+ K + Q+ C IT Sbjct: 188 LRELPLRVGRLKTGTPPRIDGRSVVFSVMTEQPGDTPIPVMSFLGSKEQHPEQVSCWITH 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+FLEPEGL T Sbjct: 248 TNARTHEIIAANLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFLEPEGLTTHE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R+I G+E +I+RPGYAIEYD+ +P++L +LETK I GLF Sbjct: 308 LYPNGISTSLPFDVQLQIVRSIRGMENAHIVRPGYAIEYDFFDPRDLKYSLETKVIGGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 368 FAGQINGTTGYEEAGAQGLLAGANAALRAQGKDSWCPRRDEAYIGVLVDDLITLGTQEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + +RR F + LKS + Sbjct: 428 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDRRWAAFEAKREGIEREEQRLKSTWVR 487 Query: 485 SKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +I+ + Y LS P+ +L I DA + V E+++I + Sbjct: 488 PNTPQGEAIAERFGTPLTHEYNLLNLLSRPEIDYASLVEITGDAVD-NPQVAEQVEIRTK 546 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E ++ E +P D DY + LS E++ KL+ +P L QAS+I G+ Sbjct: 547 YAGYIDRQQEEIARLRASEDTRLPVDIDYLGISGLSKEIQNKLNQARPETLGQASRIPGV 606 Query: 602 TPAALNLLLIYIKK 615 TPAA++LLLI++KK Sbjct: 607 TPAAISLLLIHLKK 620 >gi|148266437|ref|YP_001233143.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Geobacter uraniireducens Rf4] gi|205831514|sp|A5G9V2|MNMG_GEOUR RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|146399937|gb|ABQ28570.1| glucose inhibited division protein A [Geobacter uraniireducens Rf4] Length = 624 Score = 556 bits (1433), Expect = e-156, Method: Compositional matrix adjust. Identities = 303/615 (49%), Positives = 395/615 (64%), Gaps = 3/615 (0%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 ++SYDV+V+GGGHAGCEAA AA++G T L++ I MSCNPAIGGL KGHLV+EI Sbjct: 5 DKSYDVVVVGGGHAGCEAALAAARMGCCTLLLSINLDAIALMSCNPAIGGLAKGHLVKEI 64 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G M + DA GIQFR+LN KKGPAVR R QAD++ YRL M+R + Q+ LD+ Q Sbjct: 65 DALGGEMAKNIDATGIQFRILNTKKGPAVRASRAQADKQQYRLRMKRILEHQDKLDLKQA 124 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 EV E + + + T++LTTGTF+RG+IHIG P GR GD PS L Sbjct: 125 EVTSLLVEDGNVVGVDTKAGVRYLGKTIILTTGTFMRGLIHIGLTHYPGGRAGDLPSVGL 184 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGI 242 S + F GRLKTGTPARLDG+TI + + E Q+ D IPFSF TDKIT Q+ C I Sbjct: 185 SVSLEECGFKVGRLKTGTPARLDGRTIDFSRLEPQYGDNPPIPFSFSTDKITQSQVPCHI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 TN +H II + S +YSG I+ GPRYCPSIEDK+VRF E++ HQ F+EPEG++T Sbjct: 245 AYTNERSHDIIRSGLDRSPLYSGIIEGVGPRYCPSIEDKVVRFPEKDRHQTFIEPEGVDT 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 VYP+G+ST+LP ++Q F R+I GLE+V I+RP YAIEYDY++P +L +LETK + Sbjct: 305 VEVYPSGLSTSLPIDVQWAFYRSIYGLERVEIMRPAYAIEYDYVDPIQLHASLETKVVGN 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQINGT+GYEEAAAQGL+AGIN+A + + + R D+YIGVMIDDL + G E Sbjct: 365 LYHAGQINGTSGYEEAAAQGLIAGINAALRVQGKEPLILGRNDAYIGVMIDDLVTLGSKE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF-AKYIQEYNFLRSLLKSL 481 PYRMFTSRAEYR+ LR DNAD RL G +G + E +RF AK L+ L + Sbjct: 425 PYRMFTSRAEYRLLLREDNADLRLCEKGYAIGLVREEEYRRFHAKKNMIEEELQRLRQEK 484 Query: 482 VLTSKNLSSTSISFKQDG--KTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 +L S+ F G T + L PD + L I + + V E+++I+ Sbjct: 485 LLPSEADDVFMEEFGLTGMQNAMTYEQLLRRPDIDSRELARIDKHIMEIPAAVREQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ+ + + + E IP D +Y+ LP LS E++EKL +P L QAS+I Sbjct: 545 IKYQGYIDRQLEQVERARKLESAKIPGDLEYAGLPGLSAEVREKLQQFRPDTLGQASRIP 604 Query: 600 GMTPAALNLLLIYIK 614 G+TPAA+ +L I +K Sbjct: 605 GVTPAAITILSIALK 619 >gi|119947334|ref|YP_945014.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Psychromonas ingrahamii 37] gi|166222724|sp|A1T100|MNMG_PSYIN RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|119865938|gb|ABM05415.1| glucose inhibited division protein A [Psychromonas ingrahamii 37] Length = 629 Score = 556 bits (1433), Expect = e-156, Method: Compositional matrix adjust. Identities = 309/622 (49%), Positives = 404/622 (64%), Gaps = 5/622 (0%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 + +DVIVIGGGHAG EAAA AA++G +T L+TH T+G MSCNPAIGG+GKGHLVREI Sbjct: 4 HEHFDVIVIGGGHAGTEAAAAAARMGMNTLLLTHNIETLGQMSCNPAIGGIGKGHLVREI 63 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL GLM AD AGIQFR+LN KGPAVR R QADR LY+ A++ ++ +QENL + Q Sbjct: 64 DALGGLMANAADKAGIQFRILNGSKGPAVRATRAQADRLLYKAAIREKLENQENLKIFQQ 123 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 EV E + +S +V + TVVLT GTFL G IH+G GR GDS S L Sbjct: 124 EVEDLVVENDRVSGVVTKMGIKFSAKTVVLTVGTFLNGQIHVGLKNHSGGRAGDSASIGL 183 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECG 241 + TGRLKTGTPAR+D ++I + E Q D FSF+ D+ + RQI C Sbjct: 184 AQRLRELPLRTGRLKTGTPARIDSRSIDFSALEVQHGDNPTPVFSFLGDRSEHPRQIPCY 243 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT TN +TH II N+ S +YSG I+ GPRYCPSIEDK++RF ++N HQIF+EPEGL Sbjct: 244 ITHTNEKTHDIIRRNLDRSPMYSGVIEGVGPRYCPSIEDKVMRFADKNSHQIFVEPEGLT 303 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ +YPNGIST+LP ++Q FIR++ G E + RPGYAIEYDY +P++L TLE+K I Sbjct: 304 TNEIYPNGISTSLPFDVQIDFIRSMKGFENAFVTRPGYAIEYDYFDPRDLKSTLESKYID 363 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQINGTTGYEEAAAQGL+AG+N+ + C R +Y GV++DDL++ G Sbjct: 364 GLFFAGQINGTTGYEEAAAQGLLAGMNAGLMVQDKEGWCPGRDQAYAGVLVDDLSTLGTK 423 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+ LR DNAD RLT G +LG + + R K F+ + LK+ Sbjct: 424 EPYRMFTSRAEYRLLLREDNADTRLTEKGRELGLVDDIRWKAFSMKQESVETEIQRLKNQ 483 Query: 482 VL--TSKNLSSTSISFKQDGKTRTAYE-FLSYPDFSIQNLFSICPDARKFSSL-VIERLQ 537 + S+N S + K + + E + P+ + Q+L SI ++ E+++ Sbjct: 484 WIHPKSENASQINALLKTPMQRESTLEGMIRRPEVNYQSLISIEGLGPVLENVQAAEQVE 543 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I Y Y RQ E +++K E L+P DYS + LSNE+ KL+ KP N+ QAS+ Sbjct: 544 IIIKYQGYVDRQREEIEKLKRNEDTLLPIHLDYSDIKGLSNEVTAKLNDTKPENIGQASR 603 Query: 598 IEGMTPAALNLLLIYIKKNTVK 619 I G+TPAA+++LLIYIKKN ++ Sbjct: 604 ISGITPAAISILLIYIKKNALR 625 >gi|326797439|ref|YP_004315259.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Marinomonas mediterranea MMB-1] gi|326548203|gb|ADZ93423.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Marinomonas mediterranea MMB-1] Length = 629 Score = 556 bits (1433), Expect = e-156, Method: Compositional matrix adjust. Identities = 290/619 (46%), Positives = 391/619 (63%), Gaps = 7/619 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA+ GA T L++H T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FDVIVVGGGHAGTEAALAAARTGAKTLLLSHNIETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DG M D GIQFR LN +KGPAVR R QADR LY+ A+++++ +QENL + Q Sbjct: 67 DGAMALATDQGGIQFRTLNSRKGPAVRATRAQADRILYKAAIRQQLENQENLWLFQQSCE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E+ +V Q TVVLT GTFL G+IH+G GR GD PS L Sbjct: 127 DLIVEEGAARGMVTQTGIRFLSKTVVLTAGTFLGGIIHVGLQNHSGGRAGDPPSIGLAEK 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 F RLKTGTP R+D +++ + + Q D+ S+M + + RQI C IT Sbjct: 187 LRALPFRVDRLKTGTPPRIDARSVDFSVMQAQPGDDVTPVMSYMGNSAMHPRQINCFITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH II + S +Y+G I+ GPRYCPSIEDKIVRF ++N HQIF+EPEGL T Sbjct: 247 TNEQTHDIIRSGMDRSPMYTGVIEGVGPRYCPSIEDKIVRFADKNSHQIFIEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q + +R++ GLE +I RPGYAIEYDY NP++L +LETK + GLF Sbjct: 307 LYPNGISTSLPFDVQLELVRSMKGLENAHITRPGYAIEYDYFNPQDLKYSLETKHMPGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG+N+A +S D R ++Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGLNAALQSQDKDAWTPRRDEAYLGVLVDDLITMGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + + +KS + Sbjct: 427 RMFTSRAEYRLVLREDNADMRLTEKGRELGVVSDERWAAFCEKRESIERETQRMKSSWIV 486 Query: 485 SKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSI--CPDARKFSSLVIERLQIE 539 S +I+ K + Y + L P ++ ++ P+ K V E++QI Sbjct: 487 PNTPESEAINPKLETPISREYNLLDLLKRPGIEYSDVANLKNAPE-EKIDIRVAEQVQIS 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ + + ++ +E +P+D DYS + LSNE+K+KL KP L AS+I+ Sbjct: 546 VKYEGYISRQADDIERLRRQENTALPEDLDYSGIDGLSNEVKQKLIDAKPQTLAAASRIQ 605 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+TPAA++LLL+++KK ++ Sbjct: 606 GITPAAISLLLVHLKKRSI 624 >gi|70733509|ref|YP_263284.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas fluorescens Pf-5] gi|81170572|sp|Q4K399|MNMG_PSEF5 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|68347808|gb|AAY95414.1| glucose inhibited division protein A [Pseudomonas fluorescens Pf-5] Length = 630 Score = 556 bits (1433), Expect = e-156, Method: Compositional matrix adjust. Identities = 295/617 (47%), Positives = 390/617 (63%), Gaps = 11/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++GA T L+TH T+G+MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIVIGGGHAGTEAALASARMGAKTLLLTHNVETLGAMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREIL-SQENLDVIQGEV 124 G M D GIQFRVLN +KGPAVR R QADR LY+ A+ REIL +Q NL + Q Sbjct: 67 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRILYKAAV-REILENQPNLWIFQQAA 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E++ + +V Q +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 126 DDLIVEQDQVRGVVTQMGLRFFAESVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAQ 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGIT 243 + GRLKTGTP R+DG+++ + +Q D + SF+ K + Q+ C IT Sbjct: 186 RLRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGSKEQHPPQVSCWIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 246 HTNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTH 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q Q +++I G+E +I+RPGYAIEYDY +P++L +LETK I GL Sbjct: 306 ELYPNGISTSLPFDVQLQIVQSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EP Sbjct: 366 FFAGQINGTTGYEEAGAQGLLAGANAALRAQGKDSWCPRRDEAYIGVLVDDLITLGTQEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT G +LG + + R F K + LKS + Sbjct: 426 YRMFTSRAEYRLILREDNADLRLTEKGRELGLVDDVRWAAFCKKREGIAQEEQRLKSTWV 485 Query: 484 TSKNLSSTSISFKQDGKTRTAYEF-----LSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 +I+ Q T +E+ LS P+ L + + V E+++I Sbjct: 486 RPGTEQGDAIA--QKFGTPLTHEYNLLNLLSRPEIDYAGLVEVTGQGAE-DPQVAEQVEI 542 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 ++ YA Y RQ E ++ E +P D DYS + LS E++ KL +P L QAS+I Sbjct: 543 KTKYAGYIDRQQDEIARLRASEDTKLPVDIDYSGISGLSKEIQSKLGATRPETLGQASRI 602 Query: 599 EGMTPAALNLLLIYIKK 615 G+TPAA++LL+I++KK Sbjct: 603 PGVTPAAISLLMIHLKK 619 >gi|328352837|emb|CCA39235.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Pichia pastoris CBS 7435] Length = 656 Score = 556 bits (1432), Expect = e-156, Method: Compositional matrix adjust. Identities = 286/631 (45%), Positives = 399/631 (63%), Gaps = 21/631 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 + V+VIG GHAG EAA +A+ G T+LIT S IG+ SCNP++GG+GKG L+RE+DAL Sbjct: 15 HPVVVIGAGHAGIEAATGSARTGVLTSLITPDLSKIGTCSCNPSMGGVGKGTLLREVDAL 74 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV- 124 DG+ ++ D AGIQF++LN +GPAV GPR Q DR++Y MQ+E+ NL++++G+V Sbjct: 75 DGVAPKIVDKAGIQFKILNRSRGPAVWGPRAQIDRKIYLEEMQKELEGYPNLNIVEGKVE 134 Query: 125 -------AGFNTEKNI-------ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIP 170 A T ++ I +V+ +IR V++TTGTFL G IHIG P Sbjct: 135 DLLIEPPAQTKTSTDVEGRSFGRIRGLVLDSGDLIRADKVIITTGTFLGGEIHIGLNCYP 194 Query: 171 AGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT 230 AGR+G+ + L + + F GRLKTGTP RL KTI + E Q D+ P S+M Sbjct: 195 AGRIGEDATFGLSKTLNEAGFRLGRLKTGTPPRLSSKTIDYSNLEVQHGDDPPQPMSYMN 254 Query: 231 DKI-TNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERN 289 D + N Q+ C T T E H +I N+ S +K GPRYCPSIE K++RF ++ Sbjct: 255 DTVRINEQLRCHATETTPEMHDLIRSNLDKSIHIRETVK--GPRYCPSIESKVIRFADKT 312 Query: 290 GHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPK 349 H ++LEPEG++ DVVYPNGIS +PE+IQ Q +R I GLEKVN+++PGY +EYDY++P+ Sbjct: 313 KHTVWLEPEGIDNDVVYPNGISCTMPEDIQLQMVRMIKGLEKVNMLQPGYGVEYDYVDPR 372 Query: 350 ELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIG 409 EL PTLETK I GL+LAGQINGTTGYEEAA+QG++AG+N+A + SR D YIG Sbjct: 373 ELKPTLETKLIEGLYLAGQINGTTGYEEAASQGVIAGVNAALSQQNKPPLKLSRCDGYIG 432 Query: 410 VMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQ 469 V+IDDL +KGV EPYRMFTSR+E+R+S+R DNAD RLTP G +GC+G+ R F K + Sbjct: 433 VLIDDLITKGVQEPYRMFTSRSEFRVSVRSDNADLRLTPKGRDVGCVGDERWDHFLKEKE 492 Query: 470 EYNFLRSLLKSLVLTS-KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSIC--PDAR 526 N R L +S K S I+ D K +TA++ L Y ++ LF + P Sbjct: 493 LLNTTRDYLTKFKQSSAKWRQSLGINISDDSKPKTAFDILKYQKVGMKELFPLLNFPHKA 552 Query: 527 KFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSI 586 S ++ +L +E YA + +++ K + +E L+P FDY +PALS+E+ L+ Sbjct: 553 DLSDRILHKLTVEGLYAGHLKKEIGYIKAFQSDENLLLPTGFDYRDVPALSSEVVNLLNT 612 Query: 587 LKPFNLLQASKIEGMTPAALNLLLIYIKKNT 617 ++P + QA +I+G+TPAA L I+ ++ Sbjct: 613 IQPETIGQARRIQGVTPAAFFELYRLIRSSS 643 >gi|241766013|ref|ZP_04763934.1| glucose inhibited division protein A [Acidovorax delafieldii 2AN] gi|241364012|gb|EER59268.1| glucose inhibited division protein A [Acidovorax delafieldii 2AN] Length = 660 Score = 556 bits (1432), Expect = e-156, Method: Compositional matrix adjust. Identities = 298/641 (46%), Positives = 399/641 (62%), Gaps = 27/641 (4%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DVIV+GGGHAG EAA AA++G+ T L+TH T+G MSCNP+IGG+GKGHLV+E+D Sbjct: 5 QEFDVIVVGGGHAGTEAALAAARMGSRTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D GIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q Sbjct: 65 ALGGAMALATDEGGIQFRILNSSKGPAVRATRAQADRILYKAAIRRMLENQPNLWLFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + + V Q R TVVLT GTFL G IH+G AGR GD P+ SL Sbjct: 125 VDDLMVEGDRVVGAVTQVGIRFRSRTVVLTAGTFLDGKIHVGLNNYAAGRAGDPPAVSLS 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFAD-------ERLIP-FSFMTDKITN 235 + GRLKTGTP R+DG++I + K E+Q D E +P FSFM + Sbjct: 185 ARLKELKLPQGRLKTGTPPRIDGRSIDFSKCEEQPGDGMPGGVNEGTVPVFSFMGSATMH 244 Query: 236 -RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 +Q+ C IT TN TH II S +++G I+ GPRYCPS+EDKI RF +++ HQIF Sbjct: 245 PKQMPCWITHTNERTHEIIRSGFDRSPMFTGKIEGVGPRYCPSVEDKINRFADKDSHQIF 304 Query: 295 LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT 354 LEPEGL T YPNGIST+LP +IQ+ +R++PGLE +I+RPGYAIEYDY +P+ L + Sbjct: 305 LEPEGLTTHEFYPNGISTSLPFDIQYDLVRSMPGLENAHILRPGYAIEYDYFDPRSLKSS 364 Query: 355 LETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDD 414 ET++I GLF AGQINGTTGYEEAAAQGL AGIN+A + R ++Y+GV++DD Sbjct: 365 FETRQIQGLFFAGQINGTTGYEEAAAQGLFAGINAALQCRGDAPWLPGRDEAYLGVLVDD 424 Query: 415 LTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFL 474 L +KGV EPYRMFTSRAE+R+ LR DNAD RLT +G ++G + + R F++ + Sbjct: 425 LITKGVTEPYRMFTSRAEFRLQLREDNADMRLTEVGRQMGLVDDARWNAFSRKRDAVSRE 484 Query: 475 RSLLKSLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL 531 LK+ + +NL S + K +E L PD S NL S+ D K++S Sbjct: 485 TERLKATWVNPRNLPAAESERVLGKSIEHEYNLFELLRRPDVSYANLMSL--DGGKYASS 542 Query: 532 -------------VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSN 578 V+E+++I + YA Y RQ E + EK +P D DY + ALS Sbjct: 543 GVSRETLGDLTEPVLEQVEIAAKYAGYIDRQKGEVERAAHFEKLRLPPDLDYMQVTALSI 602 Query: 579 ELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 E ++ L+ +P L AS+I G+TPA+++LL++++KK K Sbjct: 603 EARQVLNRHRPETLGHASRITGITPASISLLMVHLKKGGFK 643 >gi|317401627|gb|EFV82253.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Achromobacter xylosoxidans C54] Length = 639 Score = 556 bits (1432), Expect = e-156, Method: Compositional matrix adjust. Identities = 295/625 (47%), Positives = 396/625 (63%), Gaps = 13/625 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R +DVIV+GGGHAG EAA AA+ GA T L+TH T+G MSCNP+IGG+GKGHLV+E+D Sbjct: 5 REFDVIVVGGGHAGTEAALAAARTGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q Sbjct: 65 ALGGAMALATDEAGIQFRILNGSKGPAVRATRAQADRVLYRKAIRGRLENQPNLWLFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + + V Q R TVVLT GTFL G+IH+G GR GD P+ SL Sbjct: 125 VEDLMVEGDRVVGAVTQVGLKFRAKTVVLTAGTFLNGLIHVGLQNYSGGRAGDPPAISLG 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTD-KITNRQIECG 241 + GRLKTGTP R+DG++I + E+Q D IP FS+M + RQ+ C Sbjct: 185 QRLKELQLPQGRLKTGTPPRIDGRSINYGILEEQPGDLDPIPVFSYMGSVAMHPRQLPCW 244 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT TN TH II + S +YSG I+ GPRYCPSIEDKI RF ++ HQ+FLEPEGL+ Sbjct: 245 ITHTNARTHDIIRGGLDRSPMYSGVIEGVGPRYCPSIEDKIHRFADKESHQVFLEPEGLD 304 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T VYPNG+ST+LP ++Q I ++PGLE +I+RPGYAIEYDY +P+ L TLETK I+ Sbjct: 305 THEVYPNGVSTSLPFDVQLALIHSLPGLENAHILRPGYAIEYDYFDPRGLKSTLETKAIA 364 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GL+ AGQINGTTGYEEAAAQGL+AG+N+A + + R ++Y+GV++DDL ++GV Sbjct: 365 GLYFAGQINGTTGYEEAAAQGLLAGVNAALSALDREQWTPRRDEAYLGVLVDDLVTRGVT 424 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F + LKS Sbjct: 425 EPYRMFTSRAEYRLSLREDNADLRLTEIGRQLGIVDDARWDAFNRKRDAVAAEVERLKSS 484 Query: 482 VLTSKNLS---STSISFKQDGKTRTAYEFLSYPDFSIQNLFS--------ICPDARKFSS 530 + + L + + K + + + L P+ S + L + + Sbjct: 485 WVNPRVLPQEVAEPLLGKAIEREYSLADLLKRPNVSYEALMAARNTDGTLLAGPGVAADE 544 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 ++ E+++I+ YA Y RQ E ++ E++ IP D DY ++ +LS E+++KL +P Sbjct: 545 VLAEQVEIQVKYAGYIARQQDEVQKQIAHEQQPIPADVDYDAVTSLSFEVRQKLKTHRPE 604 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 + QA +I G+TPAA++LLLI++K+ Sbjct: 605 TIGQAGRISGVTPAAISLLLIHLKR 629 >gi|296810412|ref|XP_002845544.1| mitochondrial translation optimization protein [Arthroderma otae CBS 113480] gi|238842932|gb|EEQ32594.1| mitochondrial translation optimization protein [Arthroderma otae CBS 113480] Length = 693 Score = 555 bits (1431), Expect = e-156, Method: Compositional matrix adjust. Identities = 286/633 (45%), Positives = 393/633 (62%), Gaps = 23/633 (3%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R YDVIVIGGGHAG EA AA+ GA TALIT S IG SCNP+ GG+GKG ++REID Sbjct: 35 RQYDVIVIGGGHAGSEACTAAARSGARTALITPSRSDIGVCSCNPSFGGIGKGTMIREID 94 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDG+ GR D AGIQFR+LN KGPAV GPR Q DR LY+ M E+ + L +++G+ Sbjct: 95 ALDGVAGRTVDKAGIQFRILNRSKGPAVWGPRAQIDRALYKKYMLEELSNTPGLSIVEGK 154 Query: 124 VA----------GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGR 173 VA N + I + ++ +I V++TTGTFL G IHIG P+GR Sbjct: 155 VADIVISKENVKNLNGPQGEIVGVRLESGEVIPTGKVIITTGTFLGGEIHIGLDVFPSGR 214 Query: 174 MGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI 233 MG++ + L NS + F GRLKTGTP RLD KTI + E Q D PFS++ + + Sbjct: 215 MGEAATFGLSNSLREAGFQLGRLKTGTPPRLDRKTIDFSTLEPQLGDSPPSPFSYLNNSV 274 Query: 234 T---NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNG 290 Q+ C TN +H ++ EN+ S + GPRYCPS+E KI+RF +++ Sbjct: 275 QIGDKGQLNCWSAYTNEASHDVVRENLDKSIHIRETVN--GPRYCPSLESKIIRFKDKSR 332 Query: 291 HQIFLEPEGLN-TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPK 349 H I+LEPEGL DV+YPNGIS +P + Q + +RT+ GLE V +++PGY +EYDY++P+ Sbjct: 333 HMIWLEPEGLAPNDVIYPNGISMTIPADAQEKMLRTVRGLENVTMLQPGYGVEYDYVDPR 392 Query: 350 ELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIG 409 L PTLETK ISGL+LAGQINGTTGYEEAAAQG++AGIN+ S + SR D +IG Sbjct: 393 SLLPTLETKLISGLYLAGQINGTTGYEEAAAQGILAGINAGLASQSKPPMILSRADGFIG 452 Query: 410 VMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQ 469 +M+DDL +KGV EPYRMFT+R+EYRIS R DNAD RLT G G + ++R + F + + Sbjct: 453 IMVDDLITKGVSEPYRMFTTRSEYRISTRSDNADLRLTAKGRAAGVVSDKRWRHFTETKE 512 Query: 470 EYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLF-------SIC 522 + + LR+LL++ S S + D R+A+E LS+ S+ ++ ++ Sbjct: 513 QLSHLRTLLENTRHPSTLWSRKGFPVRTDSSVRSAFELLSHNGISLDDIIPHIDSSPAVL 572 Query: 523 PDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKE 582 FS + R+ IE YA YT RQ + A + +E L+P D DYS + LS E ++ Sbjct: 573 HALSSFSPEIRSRVAIEGRYAPYTKRQEVTALSFERDENMLLPPDIDYSKMLGLSTEERQ 632 Query: 583 KLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 L ++P ++ A ++EG+TP LL++++K Sbjct: 633 ALERVRPVSIGMARRVEGVTPVGALKLLMHVRK 665 >gi|332533707|ref|ZP_08409566.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudoalteromonas haloplanktis ANT/505] gi|332036871|gb|EGI73332.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudoalteromonas haloplanktis ANT/505] Length = 629 Score = 555 bits (1431), Expect = e-156, Method: Compositional matrix adjust. Identities = 292/621 (47%), Positives = 401/621 (64%), Gaps = 5/621 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA AA++G +T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 IFHENFDVIVVGGGHAGTEAALAAARMGMNTLLLTHNMDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G M + D GIQFR LN KGPAVR R QADR LY+ A+Q + +Q+NL + Sbjct: 62 EIDALGGAMAQAIDKGGIQFRTLNSSKGPAVRATRAQADRALYKAAIQTTLQNQDNLKIF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q E + ++ +V Q +VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQSCDDLIVENDRVTGVVTQMGLRFSAPSVVLTVGTFLGGQIHIGLENYKGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + F RLKTGTP R+D +T+ + K E Q D FSFM + + +QI Sbjct: 182 ALAERLREHPFRVDRLKTGTPPRIDARTVDFTKMEAQPGDMPTPVFSFMGKQSDHPQQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I +N+ S +YSG I+ GPRYCPSIEDKIVRF +++ HQIF+EPEG Sbjct: 242 CYITYTNEKTHDVIRKNLHRSPMYSGVIEGIGPRYCPSIEDKIVRFADKDKHQIFVEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L + +YPNGIST+LP ++Q + +++I G E +I RPGYAIEYDY +P++L +LETK Sbjct: 302 LTSYELYPNGISTSLPFDVQLEIVQSISGFENAHICRPGYAIEYDYFDPRDLKQSLETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEA AQGL+AG+N+A K D R ++Y+GV+IDDL + G Sbjct: 362 IEGLFFAGQINGTTGYEEAGAQGLIAGMNAALKVQGKDSWTPRRDEAYVGVLIDDLATLG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT G +LG + + R + F + ++ + +K Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADIRLTEKGRELGLVNDERWQAFNEKMEVIEKEKQRIK 481 Query: 480 SLVLTSKNLSSTSI-SFKQDGKTRTAY--EFLSYPDFSIQNLFSICPDARKFSSL-VIER 535 + ++ + + + TR A E L P+ +L +I +F+++ +E+ Sbjct: 482 DTWIHKDHVVVDQVNALLKTPLTREASLEELLRRPEIRYNDLMAIDGLGSEFTNVAALEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I + YA Y RQ E + E+ ++PK+FDY ++ LSNE+ KL +P + QA Sbjct: 542 VEIHTKYAGYIARQQDEINKQLRHEQTILPKEFDYKTVSGLSNEVVAKLIESRPDTIGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKKN 616 S+I G+TPAA++LLL+Y+KK Sbjct: 602 SRISGITPAAISLLLVYLKKQ 622 >gi|254572073|ref|XP_002493146.1| Mitochondrial protein, forms a heterodimer complex with Mss1p [Pichia pastoris GS115] gi|238032944|emb|CAY70967.1| Mitochondrial protein, forms a heterodimer complex with Mss1p [Pichia pastoris GS115] Length = 679 Score = 555 bits (1431), Expect = e-156, Method: Compositional matrix adjust. Identities = 286/631 (45%), Positives = 399/631 (63%), Gaps = 21/631 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 + V+VIG GHAG EAA +A+ G T+LIT S IG+ SCNP++GG+GKG L+RE+DAL Sbjct: 38 HPVVVIGAGHAGIEAATGSARTGVLTSLITPDLSKIGTCSCNPSMGGVGKGTLLREVDAL 97 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV- 124 DG+ ++ D AGIQF++LN +GPAV GPR Q DR++Y MQ+E+ NL++++G+V Sbjct: 98 DGVAPKIVDKAGIQFKILNRSRGPAVWGPRAQIDRKIYLEEMQKELEGYPNLNIVEGKVE 157 Query: 125 -------AGFNTEKNI-------ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIP 170 A T ++ I +V+ +IR V++TTGTFL G IHIG P Sbjct: 158 DLLIEPPAQTKTSTDVEGRSFGRIRGLVLDSGDLIRADKVIITTGTFLGGEIHIGLNCYP 217 Query: 171 AGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT 230 AGR+G+ + L + + F GRLKTGTP RL KTI + E Q D+ P S+M Sbjct: 218 AGRIGEDATFGLSKTLNEAGFRLGRLKTGTPPRLSSKTIDYSNLEVQHGDDPPQPMSYMN 277 Query: 231 DKI-TNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERN 289 D + N Q+ C T T E H +I N+ S +K GPRYCPSIE K++RF ++ Sbjct: 278 DTVRINEQLRCHATETTPEMHDLIRSNLDKSIHIRETVK--GPRYCPSIESKVIRFADKT 335 Query: 290 GHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPK 349 H ++LEPEG++ DVVYPNGIS +PE+IQ Q +R I GLEKVN+++PGY +EYDY++P+ Sbjct: 336 KHTVWLEPEGIDNDVVYPNGISCTMPEDIQLQMVRMIKGLEKVNMLQPGYGVEYDYVDPR 395 Query: 350 ELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIG 409 EL PTLETK I GL+LAGQINGTTGYEEAA+QG++AG+N+A + SR D YIG Sbjct: 396 ELKPTLETKLIEGLYLAGQINGTTGYEEAASQGVIAGVNAALSQQNKPPLKLSRCDGYIG 455 Query: 410 VMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQ 469 V+IDDL +KGV EPYRMFTSR+E+R+S+R DNAD RLTP G +GC+G+ R F K + Sbjct: 456 VLIDDLITKGVQEPYRMFTSRSEFRVSVRSDNADLRLTPKGRDVGCVGDERWDHFLKEKE 515 Query: 470 EYNFLRSLLKSLVLTS-KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSIC--PDAR 526 N R L +S K S I+ D K +TA++ L Y ++ LF + P Sbjct: 516 LLNTTRDYLTKFKQSSAKWRQSLGINISDDSKPKTAFDILKYQKVGMKELFPLLNFPHKA 575 Query: 527 KFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSI 586 S ++ +L +E YA + +++ K + +E L+P FDY +PALS+E+ L+ Sbjct: 576 DLSDRILHKLTVEGLYAGHLKKEIGYIKAFQSDENLLLPTGFDYRDVPALSSEVVNLLNT 635 Query: 587 LKPFNLLQASKIEGMTPAALNLLLIYIKKNT 617 ++P + QA +I+G+TPAA L I+ ++ Sbjct: 636 IQPETIGQARRIQGVTPAAFFELYRLIRSSS 666 >gi|302035745|ref|YP_003796067.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Candidatus Nitrospira defluvii] gi|300603809|emb|CBK40141.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Candidatus Nitrospira defluvii] Length = 624 Score = 555 bits (1431), Expect = e-156, Method: Compositional matrix adjust. Identities = 292/617 (47%), Positives = 400/617 (64%), Gaps = 11/617 (1%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALD 66 DVIV+GGGHAGCEAA AA++GA T L+T I MSCNPAIGG+ KGHLV+EIDAL Sbjct: 6 DVIVVGGGHAGCEAALAAARMGARTILLTMDPDRIAQMSCNPAIGGIAKGHLVKEIDALG 65 Query: 67 GLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAG 126 G MGR D AGIQFR++N KGPAVR R Q D+++YR MQR + +Q L++ G V Sbjct: 66 GEMGRNTDQAGIQFRMINTSKGPAVRALRAQCDKKVYREVMQRTLRAQPALEIRGGTVDR 125 Query: 127 FNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSF 186 T ++ IV I VVLT+GTFL+G+IHIG PAGR G++ + L + Sbjct: 126 ILTRAGGVTGIVTDAGVSIHARAVVLTSGTFLKGLIHIGLNHFPAGRAGEASAEHLSDCM 185 Query: 187 MKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTN 246 F F+ GRLKTGTP RLD +I + E Q D+ PFS+ T +++ Q+ C +T TN Sbjct: 186 RDFGFEVGRLKTGTPPRLDRDSIDFSVMEVQPGDDPPPPFSYRTRRVSLPQVPCHLTYTN 245 Query: 247 LETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVY 306 +TH II +NI S ++SG I S GPRYCPSIEDK+VRF +++ HQIF+EPEGL+T+ Y Sbjct: 246 SQTHDIIAKNIDRSPLFSGVIDSIGPRYCPSIEDKVVRFADKDRHQIFIEPEGLDTNEFY 305 Query: 307 PNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLA 366 PNGIST+LP ++Q ++TIPGLE+ +++PGYA+EYDY P++L +LETK ++GL+ A Sbjct: 306 PNGISTSLPVDVQAAILKTIPGLEQTRMLKPGYAVEYDYFPPRQLHNSLETKLVAGLYHA 365 Query: 367 GQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRM 426 GQINGT+GYEEA AQG++AGIN+A K + R+ +YIGV+IDDL +K EPYRM Sbjct: 366 GQINGTSGYEEAGAQGIMAGINAALKLRGEAPLVLDRSQAYIGVLIDDLITKDAREPYRM 425 Query: 427 FTSRAEYRISLRPDNADNRLTPIGMKLGCI-----GERRQKRFA--KYIQEYNFLRSLLK 479 FTSRAEYR+ LR DNAD RL +G ++G + G+ KRFA + +Q R + Sbjct: 426 FTSRAEYRLLLRHDNADLRLMDLGHRIGLVSDEMHGKLEAKRFAIEREVQRLKETRPKIT 485 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 S V K L + G T++ E L + S + ++ A + E +Q+E Sbjct: 486 SDV---KRLMEEA-EVGAVGPTQSLAEILRRQEMSYNKIVAVFGGADIDDPDITEAIQLE 541 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ+ + + + E R IP FDY + S+E++EKL +KP ++ QAS+I Sbjct: 542 VKYEGYIKRQLQQIQRSEKLEHRAIPDQFDYDGITGFSSEVREKLKRVKPASVGQASRIS 601 Query: 600 GMTPAALNLLLIYIKKN 616 G+TPAA++LLL+ I+++ Sbjct: 602 GVTPAAISLLLVAIERH 618 >gi|121592462|ref|YP_984358.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Acidovorax sp. JS42] gi|205831484|sp|A1W207|MNMG_ACISJ RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|120604542|gb|ABM40282.1| glucose inhibited division protein A [Acidovorax sp. JS42] Length = 661 Score = 555 bits (1431), Expect = e-156, Method: Compositional matrix adjust. Identities = 297/645 (46%), Positives = 399/645 (61%), Gaps = 31/645 (4%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DVIV+GGGHAG EAA AA++G+ T L+TH T+G MSCNP+IGG+GKGHLV+E+D Sbjct: 5 QDFDVIVVGGGHAGTEAALAAARMGSRTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D AGIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q Sbjct: 65 ALGGAMALATDEAGIQFRILNSSKGPAVRATRAQADRILYKAAIRRMLENQPNLWLFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + + V Q R VVLT GTFL G IH+G AGR GD P+ SL Sbjct: 125 VDDLMVEGDRVVGAVTQVGIRFRSRAVVLTAGTFLDGKIHVGLNNYAAGRAGDPPAVSLS 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFAD-------ERLIP-FSFMTDK--- 232 + GRLKTGTP R+DG++I + + E+Q D E +P FSFM Sbjct: 185 ARLKELQLPQGRLKTGTPPRIDGRSIDFSQCEEQPGDGMPGGVNEGQVPVFSFMAHAYGG 244 Query: 233 --ITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNG 290 + RQ+ C IT TN TH II S +++G I+ GPRYCPS+EDKI RF ++ Sbjct: 245 AAMHPRQVPCWITHTNARTHEIIRSGFDRSPMFTGKIEGVGPRYCPSVEDKINRFADKES 304 Query: 291 HQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKE 350 HQIFLEPEGL T YPNGIST+LP +IQ+ +R++ GLE +I+RPGYAIEYDY +P+ Sbjct: 305 HQIFLEPEGLTTHEFYPNGISTSLPFDIQYDLVRSMHGLENAHILRPGYAIEYDYFDPRS 364 Query: 351 LFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGV 410 L + ET++I GLF AGQINGTTGYEEAAAQGL AGIN+A + + +R ++Y+GV Sbjct: 365 LKSSFETRQIQGLFFAGQINGTTGYEEAAAQGLFAGINAALQCRGVGAWVPARDEAYLGV 424 Query: 411 MIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQE 470 ++DDL +KGV EPYRMFTSRAE+R+ LR DNAD RLT G ++G + + R F++ Sbjct: 425 LVDDLITKGVTEPYRMFTSRAEFRLQLREDNADMRLTEAGRRMGLVDDARWDAFSRKRDA 484 Query: 471 YNFLRSLLKSLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARK 527 + LKS + +NL + + K ++ L PD L ++ D K Sbjct: 485 VSRETERLKSTWVNPRNLPTVEAERVLGKAIEHEYNLFDLLRRPDVGYDALTTM--DGGK 542 Query: 528 F-------------SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLP 574 + S+ VIE+++I + YA Y RQ E + EK +P+D DY + Sbjct: 543 YASEAVSRETLGELSASVIEQVEIAAKYAGYIDRQRDEVQRAAHFEKLRLPEDLDYMQVA 602 Query: 575 ALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 ALS E+++KL +P L QAS+I G+TPAA++LL++++KK K Sbjct: 603 ALSIEVRQKLQKHRPETLGQASRISGVTPAAISLLMVHLKKGGFK 647 >gi|291288765|ref|YP_003505581.1| glucose inhibited division protein A [Denitrovibrio acetiphilus DSM 12809] gi|290885925|gb|ADD69625.1| glucose inhibited division protein A [Denitrovibrio acetiphilus DSM 12809] Length = 619 Score = 555 bits (1431), Expect = e-156, Method: Compositional matrix adjust. Identities = 294/615 (47%), Positives = 389/615 (63%), Gaps = 10/615 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+G GHAGCEAA +A++GA T L T ++ MSCNPAIGGL KG++V++ID Sbjct: 6 KTYDVIVVGAGHAGCEAALASARMGADTLLFTISVESLAQMSCNPAIGGLAKGNIVKDID 65 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M + D GIQFRVLN+KKGPAVR R QAD+ELYR M + I+ Q +LD+ QG Sbjct: 66 ALGGEMAKNTDETGIQFRVLNMKKGPAVRSSRAQADKELYRQRMLQVIMQQSSLDLKQGM 125 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V G E + +V + + V+L+TGTFL+G+IHIG AGRM + S +L Sbjct: 126 VEGVEAESGEVVGVVSDTGMLYKAKKVILSTGTFLKGLIHIGDSHYSAGRMNEFASINLV 185 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 S K F+T RLKTGTPARLD TI + K E+Q D PFSF T +I Q+ C IT Sbjct: 186 TSLHKLGFETERLKTGTPARLDVGTIDFSKLEEQGGDNPPKPFSFETKEILLPQVPCFIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II EN+ S +Y G I+ GPRYCPSIEDK+ +F ++ HQIFLEPEGL + Sbjct: 246 YTNENTHNIIRENMHRSPLYGGIIEGIGPRYCPSIEDKVKKFPHKDRHQIFLEPEGLKSR 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 Y NG S++LP ++Q R++PGLEKV +RP YAIEYD++ P L PT+ETK + GL Sbjct: 306 EYYANGFSSSLPIDVQIAMYRSVPGLEKVEFVRPAYAIEYDFVQPTALHPTMETKHVKGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + GQ+NGT+GYEEAAAQGLVAGIN+ + + R +SYIGVM DDL +KGV EP Sbjct: 366 YFTGQLNGTSGYEEAAAQGLVAGINAVLAVDGKEPFIVKRDESYIGVMCDDLVNKGVDEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMF+SRAEYR+ LR DNA+ RL G LG I + R +RF K + + S L + + Sbjct: 426 YRMFSSRAEYRLWLREDNAEYRLLEKGYDLGLISKTRYERFQKEKEAFENEFSRLNNFEI 485 Query: 484 T-SKNLSSTSISFKQDGKTRT-AYEFLSYPDFS---IQNLFSICPDARKFSSLVIERLQI 538 T SK+ + +T+T A E L P+ + I+ +F D + + E+++I Sbjct: 486 TPSKDNLEILAEYNIAPRTKTNAKEILRRPELTYADIKKMFGGTDDEK-----ISEQVEI 540 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 Y Y +Q E ++ E +P D Y + L E EKL+ ++P L QAS+I Sbjct: 541 AVKYEGYLNKQKEEIEKFNRTENVKLPDDIRYDDIQGLRREYIEKLNTIRPQTLGQASRI 600 Query: 599 EGMTPAALNLLLIYI 613 +GMTPAA++LL IYI Sbjct: 601 KGMTPAAVSLLHIYI 615 >gi|222109270|ref|YP_002551534.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gida [Acidovorax ebreus TPSY] gi|254811509|sp|B9M9W3|MNMG_ACIET RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|221728714|gb|ACM31534.1| glucose inhibited division protein A [Acidovorax ebreus TPSY] Length = 657 Score = 555 bits (1430), Expect = e-156, Method: Compositional matrix adjust. Identities = 297/641 (46%), Positives = 399/641 (62%), Gaps = 27/641 (4%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DVIV+GGGHAG EAA AA++G+ T L+TH T+G MSCNP+IGG+GKGHLV+E+D Sbjct: 5 QDFDVIVVGGGHAGTEAALAAARMGSRTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D AGIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q Sbjct: 65 ALGGAMALATDEAGIQFRILNSSKGPAVRATRAQADRILYKAAIRRMLENQPNLWLFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + + V Q R VVLT GTFL G IH+G AGR GD P+ SL Sbjct: 125 VDDLMVEGDRVVGAVTQVGIRFRSRAVVLTAGTFLDGKIHVGLNNYAAGRAGDPPAVSLS 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFAD-------ERLIP-FSFMTDKITN 235 + GRLKTGTP R+DG++I + + E+Q D E +P FSFM + + Sbjct: 185 ARLKELQLPQGRLKTGTPPRIDGRSIDFSQCEEQPGDGMPGGVNEGAVPVFSFMGNAAMH 244 Query: 236 -RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 RQ+ C IT TN TH II S +++G I+ GPRYCPS+EDKI RF ++ HQIF Sbjct: 245 PRQVPCWITHTNARTHEIIRSGFDRSPMFTGKIEGVGPRYCPSVEDKINRFADKESHQIF 304 Query: 295 LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT 354 LEPEGL T YPNGIST+LP +IQ+ +R++ GLE +I+RPGYAIEYDY +P+ L + Sbjct: 305 LEPEGLTTHEFYPNGISTSLPFDIQYDLVRSMRGLENAHILRPGYAIEYDYFDPRSLKSS 364 Query: 355 LETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDD 414 ET++I GLF AGQINGTTGYEEAAAQGL AGIN+A + +R ++Y+GV++DD Sbjct: 365 FETRQIQGLFFAGQINGTTGYEEAAAQGLFAGINAALQCRGERAWVPARDEAYLGVLVDD 424 Query: 415 LTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFL 474 L +KGV EPYRMFTSRAE+R+ LR DNAD RLT G ++G + + R F++ + Sbjct: 425 LITKGVTEPYRMFTSRAEFRLQLREDNADMRLTDAGRRMGLVDDARWDAFSRKRDAVSRE 484 Query: 475 RSLLKSLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF--- 528 LKS + +NL + + K ++ L PD L ++ D K+ Sbjct: 485 TERLKSTWVNPRNLPTVEAERVLGKAIEHEYNLFDLLRRPDVGYDALTTM--DGGKYASE 542 Query: 529 ----------SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSN 578 S+ VIE+++I + YA Y RQ E + EK +P+D DY + ALS Sbjct: 543 AVSRETLGELSAPVIEQVEIAAKYAGYIERQRDEVQRAAHFEKLRLPEDLDYMQVAALSI 602 Query: 579 ELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 E+++KL +P L QAS+I G+TPAA++LL++++KK K Sbjct: 603 EVRQKLQKHRPETLGQASRISGVTPAAISLLMVHLKKGGFK 643 >gi|148550506|ref|YP_001270608.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas putida F1] gi|166222722|sp|A5WBB4|MNMG_PSEP1 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|148514564|gb|ABQ81424.1| glucose inhibited division protein A [Pseudomonas putida F1] Length = 630 Score = 555 bits (1430), Expect = e-156, Method: Compositional matrix adjust. Identities = 293/615 (47%), Positives = 386/615 (62%), Gaps = 7/615 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FDVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGHMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREIL-SQENLDVIQGEV 124 G M D +GIQFRVLN +KGPAVR R QADR +Y+ A+ REIL +Q NL + Q Sbjct: 67 GGAMALATDKSGIQFRVLNNRKGPAVRATRAQADRAIYK-AVVREILENQPNLWIFQQSC 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E++ + +V Q +VVLTTGTFL G+IHIG GR GD PS +L + Sbjct: 126 DDLIVEQDQVKGVVTQMGLRFFAESVVLTTGTFLGGLIHIGLQNHSGGRAGDPPSIALAH 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGIT 243 + GRLKTGTP R+DG+++ + +Q D + SFM + ++ RQ+ C IT Sbjct: 186 RMRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFMGNAEMHPRQVSCWIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGLNT Sbjct: 246 HTNARTHEIIASNLDRSPMYSGVIEGVGPRYCPSIEDKIHRFADKESHQVFIEPEGLNTH 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q + +R+I G+E +I+RPGYAIEYDY +P++L +LETK I GL Sbjct: 306 ELYPNGISTSLPFDVQLELVRSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EP Sbjct: 366 FFAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT G +LG I + R F LKS + Sbjct: 426 YRMFTSRAEYRLILREDNADLRLTEKGRELGLIDDLRWAAFCAKRDGIEREEQRLKSTWV 485 Query: 484 TSKNLSSTSISFKQDGKTRTAYE---FLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 ++ K Y L+ P+ L V E+++I + Sbjct: 486 RPNTEQGQAVVDKFGTPLSHEYSLLNLLARPEIDYAGLIE-ATGGEAIDPQVAEQVEIRT 544 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 YA Y RQ E ++ E +P D DY+++ LS E++ KLS +P L QAS+I G Sbjct: 545 KYAGYIDRQQDEIARLRASEDTRLPVDIDYTTISGLSKEIQGKLSQTRPETLGQASRIPG 604 Query: 601 MTPAALNLLLIYIKK 615 +TPAA++L+LI++KK Sbjct: 605 VTPAAISLMLIHLKK 619 >gi|296392432|ref|ZP_06881907.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas aeruginosa PAb1] Length = 630 Score = 555 bits (1430), Expect = e-156, Method: Compositional matrix adjust. Identities = 294/614 (47%), Positives = 383/614 (62%), Gaps = 5/614 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FDVIVIGGGHAGTEAALAAARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAEATDKGGIQFRILNSRKGPAVRATRAQADRVLYKAAIRHTLENQPNLWIFQQACD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 127 DLIVEQDQVRGVVTQMGLRFHADNVVLTTGTFLGGLIHIGLENYSGGRAGDPPSIALARR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ K + Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGSKEQHPEQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+FLEPEGL T Sbjct: 247 TNARTHEIIAANLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFLEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R+I G+E +I+RPGYAIEYD+ +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVRSIRGMENAHIVRPGYAIEYDFFDPRDLRYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A +S D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGANAALRSQGKDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + +RR F + LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDRRWAAFVAKREGIEREEQRLKSTWVR 486 Query: 485 SKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +I+ + Y LS P+ L I DA + V E+++I + Sbjct: 487 PNTPQGDAIAERFGTPLTHEYNLLNLLSRPEIDYAGLVEITGDAVD-NPQVAEQVEIRTK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E ++ E +P D DY + LS E++ KL+ +P L QAS+I G+ Sbjct: 546 YAGYIDRQQEEIARLRASEDTRLPVDIDYLGISGLSKEIQNKLNQARPETLGQASRIPGV 605 Query: 602 TPAALNLLLIYIKK 615 TPAA++LLLI++KK Sbjct: 606 TPAAISLLLIHLKK 619 >gi|311109650|ref|YP_003982503.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Achromobacter xylosoxidans A8] gi|310764339|gb|ADP19788.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Achromobacter xylosoxidans A8] Length = 639 Score = 555 bits (1430), Expect = e-156, Method: Compositional matrix adjust. Identities = 294/625 (47%), Positives = 397/625 (63%), Gaps = 13/625 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R +DVIV+GGGHAG EAA AA+ GA T L+TH T+G MSCNP+IGG+GKGHLV+E+D Sbjct: 5 REFDVIVVGGGHAGTEAALAAARTGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q Sbjct: 65 ALGGAMALATDEAGIQFRILNGSKGPAVRATRAQADRVLYRKAIRGRLENQPNLWLFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + + V Q R +VVLT GTFL G+IH+G GR GD P+ SL Sbjct: 125 VEDLMVEGDRVVGAVTQIGLQFRAKSVVLTAGTFLNGLIHVGLQNYSGGRAGDPPAVSLG 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTD-KITNRQIECG 241 + GRLKTGTP R+DG++I + E+Q D IP FS+M + + RQ+ C Sbjct: 185 QRLKELKLPQGRLKTGTPPRIDGRSINYSILEEQPGDLNPIPVFSYMGNVGMHPRQLPCW 244 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT TN TH II + S +YSG I+ GPRYCPSIEDKI RF ++ HQ+FLEPEGL+ Sbjct: 245 ITHTNARTHDIIRGGLDRSPMYSGVIEGVGPRYCPSIEDKIHRFADKESHQVFLEPEGLD 304 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T VYPNG+ST+LP ++Q I ++PGLE +I+RPGYAIEYDY +P+ L TLETK I Sbjct: 305 THEVYPNGVSTSLPFDVQLALIHSLPGLENAHILRPGYAIEYDYFDPRGLKSTLETKAIG 364 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GL+ AGQINGTTGYEEAAAQGL+AG+N+A + + R ++Y+GV++DDL ++GV Sbjct: 365 GLYFAGQINGTTGYEEAAAQGLLAGVNAALFALDREQWTPRRDEAYLGVLVDDLVTRGVT 424 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F + LKS Sbjct: 425 EPYRMFTSRAEYRLSLREDNADLRLTEIGRRLGIVDDARWDAFNRKRDAVAAEVERLKSS 484 Query: 482 VLTSKNLS---STSISFKQDGKTRTAYEFLSYPDFSIQNLFS--------ICPDARKFSS 530 + + L + + K + + + L P S + L + + Sbjct: 485 WVNPRLLPAEVAEPLLGKAIEREYSLADLLKRPSVSYEALMAARNADGSLLAGPGVVADE 544 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 ++ E+++I+ YA Y RQ +E ++ E++ IP D DY ++ +LS E+++KL +P Sbjct: 545 VLAEQVEIQVKYAGYIDRQQVEVQKQIAHEQQAIPADVDYDAVTSLSFEVRQKLKTHRPE 604 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 + QA++I G+TPAA++LLLI++K+ Sbjct: 605 TVGQAARISGVTPAAISLLLIHLKR 629 >gi|116053716|ref|YP_794043.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas aeruginosa UCBPP-PA14] gi|218894668|ref|YP_002443538.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas aeruginosa LESB58] gi|254237761|ref|ZP_04931084.1| glucose-inhibited division protein A [Pseudomonas aeruginosa C3719] gi|254243110|ref|ZP_04936432.1| glucose-inhibited division protein A [Pseudomonas aeruginosa 2192] gi|122256264|sp|Q02DE3|MNMG_PSEAB RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|226704796|sp|B7V7A2|MNMG_PSEA8 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|115588937|gb|ABJ14952.1| glucose-inhibited division protein A [Pseudomonas aeruginosa UCBPP-PA14] gi|126169692|gb|EAZ55203.1| glucose-inhibited division protein A [Pseudomonas aeruginosa C3719] gi|126196488|gb|EAZ60551.1| glucose-inhibited division protein A [Pseudomonas aeruginosa 2192] gi|218774897|emb|CAW30715.1| glucose-inhibited division protein A [Pseudomonas aeruginosa LESB58] Length = 630 Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust. Identities = 294/614 (47%), Positives = 383/614 (62%), Gaps = 5/614 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FDVIVIGGGHAGTEAALAAARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAEATDKGGIQFRILNSRKGPAVRATRAQADRVLYKAAIRHTLENQPNLWIFQQACD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 127 DLIVEQDQVRGVVTQMGLRFHADNVVLTTGTFLGGLIHIGLENYSGGRAGDPPSIALARR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ K + Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGSKEQHPEQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+FLEPEGL T Sbjct: 247 TNARTHEIIAANLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFLEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R+I G+E +I+RPGYAIEYD+ +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVRSIRGMENAHIVRPGYAIEYDFFDPRDLRYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A +S D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGANAALRSQGKDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + +RR F + LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDRRWAAFEAKREGIEREEQRLKSTWVR 486 Query: 485 SKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +I+ + Y LS P+ L I DA + V E+++I + Sbjct: 487 PNTPQGDAIAERFGTPLTHEYNLLNLLSRPEIDYAGLVEITGDAVD-NPQVAEQVEIRTK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E ++ E +P D DY + LS E++ KL+ +P L QAS+I G+ Sbjct: 546 YAGYIDRQQEEIARLRASEDTRLPVDIDYLGISGLSKEIQNKLNQARPETLGQASRIPGV 605 Query: 602 TPAALNLLLIYIKK 615 TPAA++LLLI++KK Sbjct: 606 TPAAISLLLIHLKK 619 >gi|293393679|ref|ZP_06637988.1| glucose-inhibited division protein A [Serratia odorifera DSM 4582] gi|291423801|gb|EFE97021.1| glucose-inhibited division protein A [Serratia odorifera DSM 4582] Length = 629 Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust. Identities = 290/616 (47%), Positives = 394/616 (63%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMATAIDHAGIQFRILNASKGPAVRATRAQADRVLYRQAVRSALENQPNLTLFQQPVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS SL Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPSISLSQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVNRLKTGTPPRIDARTIDFSVLAEQHGDTPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LP ++Q Q +R++ G++ I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 VYPNGISTSLPFDVQMQIVRSMEGMQNARIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+ R + + R +Y+GV++DDL++ G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAGRYAVDDEGWSPRRDQAYLGVLVDDLSTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL- 483 RMFTSRAEYR+ LR DNAD RLT G +LG + + R R+++ ++ R L+ + + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEKGRELGLVDDVRWARYSEKLELIERERQRLRDVWVH 486 Query: 484 -TSKNLSSTSISFKQD-GKTRTAYEFLSYPDFSIQNLFSICPDARKFS-SLVIERLQIES 540 S N++ + K + E L P+ L ++ A + + E+++I+ Sbjct: 487 PHSDNVAQVNSLLKAPLSREANGEELLRRPEMDYAQLTAVDAFAPPLTDTQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E + + E ++P D DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIDKQQRNENTVLPLDLDYRQVSGLSNEVIAKLNDHKPNSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LL+++KK Sbjct: 607 ITPAAISILLVWLKKQ 622 >gi|27364443|ref|NP_759971.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio vulnificus CMCP6] gi|29611746|sp|Q8DDH9|MNMG_VIBVU RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|27360562|gb|AAO09498.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio vulnificus CMCP6] Length = 632 Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust. Identities = 289/623 (46%), Positives = 391/623 (62%), Gaps = 11/623 (1%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA +A+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHETFDVIVVGGGHAGTEAALASARTGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRDFLENAPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E++ + ++ Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQAVDDLIVEQDQVRGVITQMGLKFHAKAVVLTVGTFLGGKIHIGLQSSSGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D +++ + E Q D FSFM D+ + RQI Sbjct: 182 ALADRLRELPFRVDRLKTGTPPRIDARSVDFSVLEAQHGDNPTPVFSFMGDRTHHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CFITHTNEQTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTHELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG+N++ S + + R +Y+GV+IDDL++ G Sbjct: 362 IQGLFFAGQINGTTGYEEAAAQGLMAGLNASLFSQEKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAE+R+ LR DNAD RLT +LG + + R RF + I R LK Sbjct: 422 TKEPYRMFTSRAEHRLLLREDNADLRLTEKARELGLVDDARWARFNQKIDNMEQERQRLK 481 Query: 480 SLVLTSKNLSSTSISFKQD------GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-V 532 S T N +ST I + + + L P+ + + L S+ A L Sbjct: 482 S---TWMNPASTGIEELNQLLKSPMNREASGEDLLRRPEMTYEQLTSLAAFAPALDDLEA 538 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 E+++I+ Y Y RQ E ++ E +P D DYS + LSNE+ KL+ KP L Sbjct: 539 AEQVEIQVKYEGYIKRQQDEIEKSLRHEHTKLPADLDYSDVKGLSNEVVLKLNTAKPETL 598 Query: 593 LQASKIEGMTPAALNLLLIYIKK 615 AS+I G+TPAA+++LL+++KK Sbjct: 599 GIASRISGITPAAISILLVHLKK 621 >gi|329900649|ref|ZP_08272541.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Oxalobacteraceae bacterium IMCC9480] gi|327549425|gb|EGF33989.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Oxalobacteraceae bacterium IMCC9480] Length = 644 Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust. Identities = 292/623 (46%), Positives = 398/623 (63%), Gaps = 12/623 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++G T L++H T+G MSCNP+IGG+GKGHLVRE+DA+ Sbjct: 7 FDVIVVGGGHAGTEAALASARMGQKTLLLSHNIETLGQMSCNPSIGGIGKGHLVREVDAM 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D AGIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 67 GGAMAIATDEAGIQFRILNSSKGPAVRATRAQADRLLYKQAIRTRLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IH+G AGR GD P+ +L Sbjct: 127 DLIVEGDRVVGAVTQIGIQFRSRAVVLTAGTFLDGKIHVGLNNYSAGRAGDPPAVTLSAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTD-KITNRQIECGIT 243 + GRLKTGTP RLDG+TI + ++Q D IP FS M + +Q+ C IT Sbjct: 187 LKELKMPQGRLKTGTPPRLDGRTIDFSVMQEQPGDLDPIPVFSVMGSVSMHPKQLPCWIT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I GPRYCPSIEDKI RF +++ HQIFLEPEGL T+ Sbjct: 247 HTNESTHDIIRGGLDRSPMYTGVIAGIGPRYCPSIEDKIHRFADKSSHQIFLEPEGLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP ++Q +R++ GLE+ +I+RPGYAIEYDY +P+ L +LETK I GL Sbjct: 307 EYYPNGISTSLPFDVQLALVRSMVGLEQAHILRPGYAIEYDYFDPRGLKASLETKSIQGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQG++AG+N+A ++ D R +Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGMLAGLNAALQTQGRDAWTPGRDQAYLGVLVDDLVTQGVQEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLT IG +LGC+G+ + F + + L+S + Sbjct: 427 YRMFTSRAEYRLSLREDNADMRLTEIGRELGCVGDLQWAAFEQKREAVARELERLRSTWV 486 Query: 484 TSKNLS---STSISFKQDGKTRTAYEFLSYPDFSIQNLFSICP-DARKFSS------LVI 533 + + L+ S + K + + + L P+ S L + + + + +V Sbjct: 487 SPRVLAEAESERVLGKAIEREYSLADLLRRPNVSYAGLLGLTGMEGQSLAGPGVVDLIVR 546 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I+ YA Y RQ E + + E +P +FDY ++ ALS E+++KL +P L Sbjct: 547 EQVEIQLKYAGYIDRQAREIERHEQFEHLKLPVEFDYLAVSALSMEVRQKLHAHRPETLG 606 Query: 594 QASKIEGMTPAALNLLLIYIKKN 616 QAS+I G+TPAA++LLL+++KK Sbjct: 607 QASRISGVTPAAMSLLLVHLKKG 629 >gi|168700225|ref|ZP_02732502.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Gemmata obscuriglobus UQM 2246] Length = 611 Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust. Identities = 286/619 (46%), Positives = 395/619 (63%), Gaps = 27/619 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DV+V+G GHAG EAA AA+LG T L++ + MSCNPAIGG+ KG +VREIDAL Sbjct: 8 FDVVVVGAGHAGTEAAMAAARLGLRTCLLSMNADAVAQMSCNPAIGGVAKGQIVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+MG+ DA+GIQFRVLN KGPA+ PR QAD++LY+ M+R + QENL + Q V Sbjct: 68 GGVMGKCIDASGIQFRVLNASKGPAMHSPRAQADKKLYQFTMKRWVEDQENLTLRQELVE 127 Query: 126 GFNTEKNIISS---------IVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGD 176 G E + S+ +V + ++ V+LTTGTFL+ ++H G+ K GR GD Sbjct: 128 GLLLEPHADSASPATRRVVGVVARGDTRYLAPAVILTTGTFLKAIMHTGEAKTVGGRAGD 187 Query: 177 SPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR 236 + + + S F+ R KTGTP RL+G+TI + K ++Q D PFSF T+KIT Sbjct: 188 ASAEGMSASLADAGFELARFKTGTPCRLNGRTIDFSKCQEQPGDPVPRPFSFSTEKITVP 247 Query: 237 QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLE 296 Q+ C T T H +I N+ + +YSG I GPRYCPSIEDK+VRF +++ H +FLE Sbjct: 248 QVVCHSTETTAAVHDLIRANLHRAPMYSGQICGRGPRYCPSIEDKVVRFADKDSHLLFLE 307 Query: 297 PEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLE 356 PEGLNT Y NGIST+LP+++Q ++ IPGLE ++R GYA+EYDY P +L PTLE Sbjct: 308 PEGLNTREYYCNGISTSLPKDVQAAMLKLIPGLENAEVMRWGYAVEYDYAPPTQLHPTLE 367 Query: 357 TKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 TK ++GL+ AGQINGTTGYEEAAAQGLVAG+N+A K + R+ +YIGV+IDDL Sbjct: 368 TKPVAGLYFAGQINGTTGYEEAAAQGLVAGLNAALKLKGEPALVLDRSAAYIGVLIDDLV 427 Query: 417 SKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRS 476 +KGV EPYRMFTSRAEYR+ LR DNAD RLTP+G K+G +G RF + + + L+ Sbjct: 428 TKGVDEPYRMFTSRAEYRLLLRHDNADRRLTPLGRKVGSVGVADWARFERKEKGISDLQG 487 Query: 477 LLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL--VIE 534 +L+S +L++ RT E+ + + CP ++ + V+E Sbjct: 488 VLRSTKSGGDSLATWV--------RRTEVEW--------SEVVARCPALAEWDARPDVVE 531 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 ++ +E+ Y+ Y RQ E + + E R IP FDY+ + L +E +EKLS ++P +L Q Sbjct: 532 QVVLEAKYSGYIDRQAAEVERFQRLENRRIPDAFDYARVGQLRHEAREKLSRIRPVSLGQ 591 Query: 595 ASKIEGMTPAALNLLLIYI 613 AS+I G+TPA L +LL+Y+ Sbjct: 592 ASRISGITPADLAMLLLYL 610 >gi|254427865|ref|ZP_05041572.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Alcanivorax sp. DG881] gi|196194034|gb|EDX88993.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Alcanivorax sp. DG881] Length = 631 Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust. Identities = 295/619 (47%), Positives = 393/619 (63%), Gaps = 4/619 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 ++ + VIVIGGGHAG EAA +A++G ST L+TH T+G MSCNPAIGG+GK HLVRE Sbjct: 3 FSQRFGVIVIGGGHAGTEAALASARMGVSTLLLTHNIETLGQMSCNPAIGGIGKSHLVRE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G MGR D GIQFRVLN +KGPAVR R QADRELY+ A++ + +Q++L + Q Sbjct: 63 IDALGGAMGRATDKGGIQFRVLNARKGPAVRATRAQADRELYKAAIRGTLENQQDLTLFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E +V VVLT GTFL GVIHIG GR GD PSN+ Sbjct: 123 QAVDDLIVENGRCVGVVTNMGLRFMADAVVLTAGTFLGGVIHIGMDNHQGGRAGDQPSNA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIEC 240 L + F RLKTGTP R+DGKT+ + E+Q+ D L S++ + +Q+ C Sbjct: 183 LARRLRELPFRVDRLKTGTPPRIDGKTVDFSVMEEQWGDSPLPVMSYLGQVEEHPQQVCC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH II S +++G I GPRYCPSIEDK+ R+ +++ HQIF+EPEGL Sbjct: 243 YITHTNAQTHDIIRSGFDRSPMFTGVIDGVGPRYCPSIEDKVNRYPDKDSHQIFVEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 NT +YPNGIST+LP ++Q Q +R+I G E +I RPGYAIEYDY NP++L +LET+ + Sbjct: 303 NTHELYPNGISTSLPFDVQLQAVRSIRGFENAHITRPGYAIEYDYFNPQDLKHSLETQHM 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQINGTTGYEEA AQGL+AG+N+A S D R ++YIGV++DDL + G Sbjct: 363 PGLFFAGQINGTTGYEEAGAQGLLAGLNAALLSQGKDAWTPRRDEAYIGVLVDDLITMGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS Sbjct: 423 QEPYRMFTSRAEYRLLLREDNADLRLTEKGRELGLVDDERWAAFNAKREGMAQEEQRLKS 482 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 + K + +++ + Y + L P+ + NL A + S VIE+++ Sbjct: 483 TWVRPKTPQAEAVNALIEKPLAHEYNLLDLLKRPELTYANLADAVALAERPDSAVIEQME 542 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I + YA Y RQ E ++++ E +P +FDY + LSNE+K+KL ++P L QA + Sbjct: 543 ILAKYAGYIDRQADEIEKLRAAETTALPAEFDYGQVKGLSNEVKQKLGEIRPQTLGQAGR 602 Query: 598 IEGMTPAALNLLLIYIKKN 616 I G+TPAA++LL+IY+KK+ Sbjct: 603 IPGVTPAAISLLMIYLKKH 621 >gi|127514781|ref|YP_001095978.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shewanella loihica PV-4] gi|166200613|sp|A3QJS1|MNMG_SHELP RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|126640076|gb|ABO25719.1| glucose inhibited division protein A [Shewanella loihica PV-4] Length = 629 Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust. Identities = 297/620 (47%), Positives = 386/620 (62%), Gaps = 15/620 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++G+ T L+TH T+G MSCNPAIGG+GKGHLV+EIDAL Sbjct: 7 FDVIVVGGGHAGTEAALASARMGSKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D AGIQFR LN KGPAVR R QADR LYR +Q+ + +Q NL + Q V Sbjct: 67 GGAMAVATDHAGIQFRTLNSSKGPAVRATRAQADRALYRAKIQQILQNQPNLRLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + + +V Q +VLT GTFL G IHIG GR GD PS SL + Sbjct: 127 DLIVGNDRVIGVVTQMGLAFEAPAIVLTAGTFLSGKIHIGLENYSGGRAGDPPSISLADR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGITR 244 + GRLKTGTP R+D TI +D +Q D+ L SF+ D K +QI C IT Sbjct: 187 LRELPIRVGRLKTGTPPRIDANTINFDLMTEQKGDDPLPVMSFIGDVKDHPKQISCFITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II + S +YSG I+ GPRYCPSIEDKI RF +++ HQIF+EPEGLNT+ Sbjct: 247 TNERTHDIIRGGLDRSPMYSGVIEGIGPRYCPSIEDKINRFADKSSHQIFIEPEGLNTNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q +R+I G+E IIRPGYAIEYDY +P++L +LETK ISGLF Sbjct: 307 IYPNGISTSLPFDVQLNLVRSIQGMENAEIIRPGYAIEYDYFDPRDLKNSLETKAISGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG+N++ + + C R ++Y+GV++DDL++ G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGMNASLQVQGKEAWCPRRDEAYLGVLVDDLSTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNF-LRSLLKSLVL 483 RMFTSRAEYR+ LR DNAD RLT G +LG + + R +F + L+ L + Sbjct: 427 RMFTSRAEYRLLLREDNADLRLTEKGRELGLVDDDRWAKFNAKREAIELELQRLRSQWIH 486 Query: 484 TSKNLSSTSISFKQDGKTRTAY--EFLSYPDFSIQNLFSI------CPDARKFSSLVIER 535 + L TR A E L P+ L S+ D R E+ Sbjct: 487 PNSPLVDALNPHLNTPITREATFEELLRRPELDYPKLMSVEGFGPAIEDQR-----AAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 +QI+ Y+ Y RQ E + EK +P+D DY +P LSNE+ KL+ KP + QA Sbjct: 542 VQIQVKYSGYIQRQQDEIDKAIRHEKTGLPQDLDYQEVPGLSNEVIAKLNDHKPDTVGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G+TPAA+++LL+++KK Sbjct: 602 SRISGITPAAISILLVHLKK 621 >gi|94967111|ref|YP_589159.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Candidatus Koribacter versatilis Ellin345] gi|166222901|sp|Q1IVL5|MNMG_ACIBL RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|94549161|gb|ABF39085.1| glucose inhibited division protein A [Candidatus Koribacter versatilis Ellin345] Length = 649 Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust. Identities = 301/635 (47%), Positives = 394/635 (62%), Gaps = 28/635 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+V+G GHAGCEAA AA++G TAL T I MSCNPA+GG+ KGHLVRE+DAL Sbjct: 7 YDVVVVGAGHAGCEAAMAAARMGLRTALYTLNVDLIAQMSCNPAVGGIAKGHLVREVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+MG V DA GIQFR+LN +GPAV PR Q D++ YRL M+ + S+ NL + Q EVA Sbjct: 67 GGIMGEVTDAVGIQFRLLNTSRGPAVWSPRAQCDKQQYRLKMREVLESEPNLKIKQAEVA 126 Query: 126 GFNTEK----------NIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMG 175 E I I ++D + VV+TTGTFL G+IH G+ + PAGR G Sbjct: 127 DLIVEDVSDPTHPERMKIARGIKLRDGRTVGALAVVITTGTFLNGLIHCGEEQYPAGRSG 186 Query: 176 DSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN 235 + S L S K RLKTGTP RLDG++I W K Q D PFSF T KIT Sbjct: 187 EPASVLLGESLKKMGLRGCRLKTGTPPRLDGRSIDWSKFAVQPGDAEPTPFSFRTKKITQ 246 Query: 236 RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFL 295 +Q+ C I T ETH++I EN+ S +YSG I+S GPRYCPSIEDKIV+F ++ HQIFL Sbjct: 247 KQVPCYIAHTTPETHQLIRENVHRSPMYSGQIQSTGPRYCPSIEDKIVKFPDKETHQIFL 306 Query: 296 EPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTL 355 EPEGLNT VY NG+ST+LP ++Q + + +I GLE ++RPGYAIEYD I+P EL TL Sbjct: 307 EPEGLNTYEVYVNGMSTSLPIDVQLRMVHSIVGLENAEMLRPGYAIEYDSIDPTELQRTL 366 Query: 356 ETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDL 415 ETKKI L+L GQINGT+GYEEAA QGL+AGIN+A + RT++Y ++IDDL Sbjct: 367 ETKKIGSLYLGGQINGTSGYEEAACQGLMAGINAALAVKHEPPLVLDRTEAYTAILIDDL 426 Query: 416 TSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCI-GERRQKRFAKYIQEYNFL 474 SKG EPYRMFTSRAE+R+ LR DNAD RLTP G ++G I E AK + Sbjct: 427 ISKGTNEPYRMFTSRAEFRLHLRIDNADRRLTPHGRRVGLIKDEAWHAHLAKQQRMDELK 486 Query: 475 RSLLKSLVLTSKNLSSTSISFKQ-DGKTRTAYEFLSYPDFSIQ-----------NLFSIC 522 +L K+ + TS+ + F DG T + L P+ + F Sbjct: 487 MTLEKTRIRTSELPVELAEKFGNIDGS--TVVQLLKRPESDVAAFEQIIRRVQPTFFERG 544 Query: 523 PDARKFSSLV---IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNE 579 R+F S + ++ ++ E YA Y +Q +K E+R+IP+ FDY+S+ LS E Sbjct: 545 DSEREFVSDIRNELKAVETEIKYAGYLDQQTKAIDRLKRSEQRVIPEWFDYASVSGLSRE 604 Query: 580 LKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIK 614 + EK+ ++P + QAS+I G+TPAA++L+ +YI+ Sbjct: 605 MCEKMQRVRPQTIGQASRIPGVTPAAVSLINVYIE 639 >gi|116619160|ref|YP_821316.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Candidatus Solibacter usitatus Ellin6076] gi|122256194|sp|Q02D35|MNMG_SOLUE RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|116222322|gb|ABJ81031.1| glucose inhibited division protein A [Candidatus Solibacter usitatus Ellin6076] Length = 604 Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust. Identities = 280/611 (45%), Positives = 384/611 (62%), Gaps = 24/611 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+VIG GHAGCEAA A++G TA++T I MSCNPAIGG+ KGHLVREIDAL Sbjct: 8 YDVVVIGAGHAGCEAARACARIGLRTAMVTMNLDLIAQMSCNPAIGGIAKGHLVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+MG VAD+ GIQFR+LN +GPAV PR Q D++LYR M+ + ++ NL + Q EVA Sbjct: 68 GGVMGEVADSVGIQFRLLNTSRGPAVWSPRAQMDKKLYRFRMREVLEAEPNLRIKQAEVA 127 Query: 126 GFNTEK-NIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + ++ ++++D I V++TTGTFL G+ H+G++ GR G++PS L + Sbjct: 128 ALTFDAVRRVNGVLLRDGRTIPAGAVIVTTGTFLNGLAHVGEMTYSCGRNGEAPSQLLGD 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + RLKTGTP RLDG++I W E Q D PFSF+T +I +QI+C I Sbjct: 188 QLRSMGLNWTRLKTGTPPRLDGRSIDWSSFEPQAGDAEPTPFSFLTGRIERQQIQCHIGY 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ET R++ E I S +YSG I+ GPRYCPSIEDK V+F ++ HQIFLEPEGL+T Sbjct: 248 TTDETRRVLQEAIPRSPLYSGQIEGVGPRYCPSIEDKFVKFPDKVRHQIFLEPEGLDTHE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY NG+ST++P ++Q + +IPGLE+ +IRPGYAIEYD I+P+EL TLE K I GL+ Sbjct: 308 VYVNGMSTSMPTDVQVAMVASIPGLEQAEMIRPGYAIEYDAIDPRELNHTLEVKSIPGLY 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGT+GYEEA QGL+AG+N+A D + RT+ Y G+++DDL +KG EPY Sbjct: 368 LAGQINGTSGYEEAGIQGLIAGLNAAMSLGGSDPVIIGRTEGYAGILVDDLITKGADEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAE+R+ LR DNAD RLTP+G + G + R + F + +E LR L T Sbjct: 428 RMFTSRAEFRLHLRIDNADARLTPLGRRAGLATDERWELFQR--KERQKLR--LTQAFET 483 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL--VIERLQIESSY 542 KN + L P+ SI + + + ++E + E+ Y Sbjct: 484 HKN-----------------GQLLKRPEVSISDFLPWIVEVLGEAPCRGLLETVSTEAKY 526 Query: 543 AAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMT 602 Y +Q + +K E+R IP F+Y +P LS E+++KL ++P L QA ++ G+T Sbjct: 527 GGYIQQQERQMARMKDSERRAIPHGFEYRGIPGLSREIQDKLDKVRPGTLGQAGRVPGVT 586 Query: 603 PAALNLLLIYI 613 PAA+ +L Y+ Sbjct: 587 PAAIAVLDCYL 597 >gi|320154847|ref|YP_004187226.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio vulnificus MO6-24/O] gi|319930159|gb|ADV85023.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio vulnificus MO6-24/O] Length = 632 Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust. Identities = 289/623 (46%), Positives = 391/623 (62%), Gaps = 11/623 (1%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA +A+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHETFDVIVVGGGHAGTEAALASARTGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRDFLENAPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E++ + ++ Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQAVDDLIVEQDQVRGVITQMGLKFHAKAVVLTVGTFLGGKIHIGLQSSSGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D +++ + E Q D FSFM D+ + RQI Sbjct: 182 ALADRLRELPFRVDRLKTGTPPRIDARSVDFSVLEAQHGDNPTPVFSFMGDRTHHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CFITHTNEQTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTHELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG+N++ S + + R +Y+GV+IDDL++ G Sbjct: 362 IQGLFFAGQINGTTGYEEAAAQGLMAGLNASLFSQEKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAE+R+ LR DNAD RLT +LG + + R RF + I R LK Sbjct: 422 TKEPYRMFTSRAEHRLLLREDNADLRLTEKARELGLVDDARWARFNQKIDNMEQERQRLK 481 Query: 480 SLVLTSKNLSSTSISFKQD------GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-V 532 S T N +ST I + + + L P+ + + L S+ A L Sbjct: 482 S---TWMNPASTGIEELNQLLKSPMNREASGEDLLRRPEMTYEQLTSLAAFAPALDDLEA 538 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 E+++I+ Y Y RQ E ++ E +P D DYS + LSNE+ KL+ KP L Sbjct: 539 AEQVEIQVKYEGYIKRQQDEIEKSLRHEHTKLPVDLDYSEVKGLSNEVVLKLNTAKPETL 598 Query: 593 LQASKIEGMTPAALNLLLIYIKK 615 AS+I G+TPAA+++LL+++KK Sbjct: 599 GIASRISGITPAAISILLVHLKK 621 >gi|37681446|ref|NP_936055.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio vulnificus YJ016] gi|56749077|sp|Q7MGG9|MNMG_VIBVY RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|37200198|dbj|BAC96026.1| glucose inhibited division protein A [Vibrio vulnificus YJ016] Length = 632 Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust. Identities = 292/623 (46%), Positives = 392/623 (62%), Gaps = 11/623 (1%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA +A+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHETFDVIVVGGGHAGTEAALASARTGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRDFLENAPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E++ + ++ Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQAVDDLIVEQDQVRGVITQMGLKFHAKAVVLTVGTFLGGKIHIGLQSSSGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D +++ + E Q D FSFM D+ + RQI Sbjct: 182 ALADRLRELPFRVDRLKTGTPPRIDARSVDFSVLEAQHGDNPTPVFSFMGDRTHHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CFITHTNEQTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTHELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG+N++ S + + R +Y+GV+IDDL++ G Sbjct: 362 IQGLFFAGQINGTTGYEEAAAQGLMAGLNASLFSQEKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAE+R+ LR DNAD RLT +LG + + R RF + I R LK Sbjct: 422 TKEPYRMFTSRAEHRLLLREDNADLRLTEKARELGLVDDARWARFNQKIDNMEQERQRLK 481 Query: 480 SLVLTSKNLSSTSIS-FKQDGKT-----RTAYEFLSYPDFSIQNLFSICPDARKFSSL-V 532 S T N +ST I Q KT + + L P+ + L S+ A L Sbjct: 482 S---TWMNPASTGIDELNQLLKTPMNREASGEDLLRRPEMTYDQLTSLTAFAPAIDDLEA 538 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 E+++I+ Y Y RQ E ++ E +P D DYS + LSNE+ KL+ KP L Sbjct: 539 AEQVEIQVKYEGYIKRQQDEIEKSLRHEHTKLPADLDYSDVKGLSNEVVLKLNTAKPETL 598 Query: 593 LQASKIEGMTPAALNLLLIYIKK 615 AS+I G+TPAA+++LL+++KK Sbjct: 599 GIASRISGITPAAISILLVHLKK 621 >gi|197286880|ref|YP_002152752.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Proteus mirabilis HI4320] gi|238693206|sp|B4F0D8|MNMG_PROMH RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|194684367|emb|CAR46005.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme (glucose-inhibited division protein A) [Proteus mirabilis HI4320] Length = 632 Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust. Identities = 294/617 (47%), Positives = 393/617 (63%), Gaps = 7/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA+ Sbjct: 7 FDVIVIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAM 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMATAIDHAGIQFRTLNASKGPAVRATRAQADRVLYRQAIRTTLENQPNLMIFQQPVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + ++ V + R VVLT GTFL G IHIG GR GD PS SL + Sbjct: 127 DLIVENDQVTGAVTRMGLKFRAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPSVSLSHR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +TI + + Q D + FSF+ + + Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSQLAPQLGDNPMPVFSFLGNVDQHPEQMPCHITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH II N++ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEQTHEIIRNNLERSPMYAGVIEGIGPRYCPSIEDKVMRFADRNSHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q + ++ G+E IIRPGYAIEYD+ +P++L TLE+K I+GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVNSMKGMENAKIIRPGYAIEYDFFDPRDLKQTLESKFINGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR + + R +YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARYAFDQEGWFPRRDQAYIGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R +F++ ++ R L+ + + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGMVDDNRWAQFSEKVELVEKERQRLRDIWVH 486 Query: 485 SK--NLSSTSISFKQD-GKTRTAYEFLSYPDFSIQNLFSI---CPDARKFSSLVIERLQI 538 K NL + K K + L P+ + + L I P E+++I Sbjct: 487 PKADNLEEINQLLKTPLSKEANGEDLLRRPEMTYEILKKIPRFAPGIDDSRPQAAEQVEI 546 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + Y Y RQ E ++ E +P D DY + LSNE+ KL+ KP ++ QAS+I Sbjct: 547 QVKYEGYINRQQEEIEKQLRNESAALPIDIDYKQVSGLSNEVIAKLNDHKPTSIGQASRI 606 Query: 599 EGMTPAALNLLLIYIKK 615 G+TPAA+++LL+++KK Sbjct: 607 SGVTPAAISILLVWLKK 623 >gi|226947204|ref|YP_002802277.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Azotobacter vinelandii DJ] gi|226722131|gb|ACO81302.1| Glucose-inhibited division protein A, gidA [Azotobacter vinelandii DJ] Length = 631 Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust. Identities = 289/620 (46%), Positives = 389/620 (62%), Gaps = 5/620 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G T L++H T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 8 FDVIVIGGGHAGTEAALAAARMGVKTLLLSHNVETLGHMSCNPAIGGIGKSHLVKEIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M R D AGIQFRVLN +KGPAVR R QADR LY+ ++R + +Q NL + Q Sbjct: 68 GGAMARATDVAGIQFRVLNSRKGPAVRATRAQADRALYKAEIRRILENQPNLWIFQQSAD 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + +V Q R VVLT GTFL G+IHIG GR GD PS +L Sbjct: 128 DLIVEGEQVRGVVTQMGLKFRADNVVLTAGTFLGGLIHIGLENYSGGRAGDPPSQALARR 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+DG++I + +Q D + SF+ + + RQ+ C IT Sbjct: 188 LRELPLRVGRLKTGTPPRIDGRSIDFSAMTEQPGDTPVPVMSFLGSREQHPRQVSCWITH 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH+II N+ S +YSG I+ GPRYCPSIEDKI RF +++ HQ+FLEPEGL+T Sbjct: 248 TNARTHQIIAANLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKDSHQVFLEPEGLSTHE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LP ++Q + +R+I GLE +I+RPGYAIEYD+ +P++L +LETK I GLF Sbjct: 308 VYPNGISTSLPFDVQLEIVRSIRGLENAHIVRPGYAIEYDFFDPRDLKYSLETKVIGGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ + C R ++Y+GV++DDL + G EPY Sbjct: 368 FAGQINGTTGYEEAGAQGLLAGANAALRAQGREAWCPRRDEAYLGVLVDDLITLGTQEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LK+ + Sbjct: 428 RMFTSRAEYRLILREDNADLRLTEQGRELGLVDDARWAAFCAKREGIEREEQRLKTTWVR 487 Query: 485 SKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +++ + Y L+ P+ +L + + V E+++I++ Sbjct: 488 PGTPQGKAVAARFGSPLAREYNLLNLLARPEVDYASLVELTGGGAE-DEQVAEQVEIKTK 546 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E ++ E +P++ DY+S+ LS E++ KL +P L QAS+I G+ Sbjct: 547 YAGYIDRQQDEIARLRASESVRLPENLDYASISGLSKEIQHKLGQGRPQTLGQASRIPGV 606 Query: 602 TPAALNLLLIYIKKNTVKLN 621 TPAA++LLLI++KK N Sbjct: 607 TPAAISLLLIHLKKRDAGRN 626 >gi|254522439|ref|ZP_05134494.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Stenotrophomonas sp. SKA14] gi|219720030|gb|EED38555.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Stenotrophomonas sp. SKA14] Length = 629 Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust. Identities = 287/618 (46%), Positives = 386/618 (62%), Gaps = 11/618 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAG EAA AA+ G T L+TH T+G+MSCNPAIGG+GKGHLV+EIDAL Sbjct: 8 YDVIVIGGGHAGTEAALAAARTGVRTLLLTHNIETVGAMSCNPAIGGIGKGHLVKEIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M AD AGIQ+R LN KGPAVR R QADR LYR+A++ + Q NL V Q V Sbjct: 68 GGAMAHAADRAGIQWRTLNASKGPAVRATRCQADRNLYRMAIRAIVEGQANLTVFQAAVD 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + ++ Q VVLT GTFL G IH+G + AGRMGD P+ +L Sbjct: 128 DLVIEGDAVRGVITQTGLRFDAEAVVLTAGTFLAGKIHVGPTQYAAGRMGDPPATTLAAR 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + F RLKTGTP R+DG+++ + ++Q D SF+ + +Q+ C IT Sbjct: 188 LRERPFQVDRLKTGTPPRIDGRSLDYSVMDEQPGDTPRPVMSFLGSVDEHPQQVSCWITH 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T +TH+II + + S +YSG I+ GPRYCPSIEDK+VRF E+ HQIF+EPEGL Sbjct: 248 TTEQTHQIIRDALHRSPLYSGQIEGIGPRYCPSIEDKVVRFAEKASHQIFVEPEGLGIVE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q + +R+I G E +I RPGYAIEYD+ +P+ L +LETK ++GLF Sbjct: 308 IYPNGISTSLPFDVQLEMVRSIRGFENAHITRPGYAIEYDFFDPRGLKASLETKLVNGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR+ LD C R ++Y+GV++DDL + G EPY Sbjct: 368 FAGQINGTTGYEEAAAQGLLAGLNAARQVRGLDGWCPRRDEAYLGVLVDDLITHGTNEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLTP G ++G + +RR F R+ L +L T Sbjct: 428 RMFTSRAEYRLQLREDNADQRLTPAGREMGLVDDRRWSAFETKQAAVAAERARLGALWAT 487 Query: 485 SKNLSSTSISFKQD------GKTRTAYEFLSYPDFSIQNLFSICPDARKFS-SLVIERLQ 537 N + QD + + + P+ L + + V E+++ Sbjct: 488 PANALGREV---QDTLGVAVSRETNVLDLIKRPELDYAQLMQVPSLGPAVADGKVAEQVE 544 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I YA Y RQ E + + E I + FDY+++ LS E +KL ++P + QA + Sbjct: 545 IGVKYAGYLDRQREEIERQQRHEATPIAEAFDYATVRGLSAEALQKLERVRPQTIGQAQR 604 Query: 598 IEGMTPAALNLLLIYIKK 615 I GMTPAA++LLL+++++ Sbjct: 605 IPGMTPAAISLLLVHLER 622 >gi|327482902|gb|AEA86212.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas stutzeri DSM 4166] Length = 630 Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust. Identities = 290/621 (46%), Positives = 393/621 (63%), Gaps = 13/621 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FDVIVIGGGHAGTEAALAAARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAVATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIRELLENQPNLWIFQQAAD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E+N + +V Q ++VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 127 DLIVEQNEVRGVVTQMGLRFLATSVVLTTGTFLGGLIHIGLQNYSGGRAGDPPSIALAKR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + GRLKTGTP R+DG+++ + + +Q D L SF+ + + Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSQMTEQPGDTPLPVMSFLGSREQHPPQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF +++ HQ+FLEPEGL T Sbjct: 247 TNARTHEIIAANLDRSPMYSGVIEGVGPRYCPSIEDKIYRFADKDSHQVFLEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +++I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVQSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGANAALRAQGKDSWCPRRDEAYLGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LK+ + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCAKREGIEREEQRLKNSWVR 486 Query: 485 SKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSIC----PDARKFSSLVIERLQ 537 +I+ + Y L+ P+ Q+L + PD + V E+++ Sbjct: 487 PGTPQGDAIAERFGSPLAREYNLLNLLARPEIDYQSLIELTGPGEPDPQ-----VAEQVE 541 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I++ YA Y RQ E ++++ E +P D DY+++ LS E++ KL +P L QAS+ Sbjct: 542 IKTKYAGYIERQQDEIEKLRASENVALPADLDYATISGLSKEIQHKLGQARPQTLGQASR 601 Query: 598 IEGMTPAALNLLLIYIKKNTV 618 I G+TPAA++LL+I++KK + Sbjct: 602 IPGVTPAAVSLLMIHLKKRSA 622 >gi|167036428|ref|YP_001671659.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas putida GB-1] gi|189039352|sp|B0KRB9|MNMG_PSEPG RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|166862916|gb|ABZ01324.1| glucose inhibited division protein A [Pseudomonas putida GB-1] Length = 630 Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust. Identities = 293/615 (47%), Positives = 386/615 (62%), Gaps = 7/615 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGHMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREIL-SQENLDVIQGEV 124 G M D +GIQFRVLN +KGPAVR R QADR +Y+ A+ REIL +Q NL + Q Sbjct: 67 GGAMALATDKSGIQFRVLNNRKGPAVRATRAQADRAIYK-AVVREILENQPNLWIFQQSC 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E++ + +V Q +VVLTTGTFL G+IHIG GR GD PS +L + Sbjct: 126 DDLIVEQDQVKGVVTQMGLRFFAESVVLTTGTFLGGLIHIGLQNHSGGRAGDPPSIALAH 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGIT 243 + GRLKTGTP R+DG+++ + +Q D + SFM + ++ RQ+ C IT Sbjct: 186 RMRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFMGNAEMHPRQVSCWIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF +++ HQ+F+EPEGL T Sbjct: 246 HTNARTHEIIASNLDRSPMYSGVIEGVGPRYCPSIEDKIHRFADKDSHQVFIEPEGLTTH 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q + +R+I G+E +I+RPGYAIEYDY +P++L +LETK I GL Sbjct: 306 ELYPNGISTSLPFDVQLELVRSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EP Sbjct: 366 FFAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT G +LG I ++R F LKS + Sbjct: 426 YRMFTSRAEYRLILREDNADLRLTEKGRELGLIDDQRWAAFCAKRDGIEREEQRLKSTWV 485 Query: 484 TSKNLSSTSISFKQDGKTRTAYE---FLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 +I K Y L+ P+ L V E+++I + Sbjct: 486 RPNTEQGQAIVDKFGTPLSHEYSLLNLLARPEIDYAGLIE-ATGGEAIDPQVAEQVEIRT 544 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 YA Y RQ E ++ E +P D DYS++ LS E++ KL +P L QAS+I G Sbjct: 545 KYAGYIDRQQDEIARLRASEDTRLPVDIDYSTISGLSKEIQGKLGQTRPETLGQASRIPG 604 Query: 601 MTPAALNLLLIYIKK 615 +TPAA++LLLI++KK Sbjct: 605 VTPAAISLLLIHLKK 619 >gi|290473125|ref|YP_003465986.1| glucose-inhibited division protein, oxidoreductase-like with FAD/NAD(P)-binding domain [Xenorhabdus bovienii SS-2004] gi|289172419|emb|CBJ79186.1| glucose-inhibited division protein, oxidoreductase-like with FAD/NAD(P)-binding domain [Xenorhabdus bovienii SS-2004] Length = 629 Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust. Identities = 291/619 (47%), Positives = 400/619 (64%), Gaps = 13/619 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAQATDQAGIQFRTLNASKGPAVRATRAQADRVLYRQAVRTALENQSNLMIFQQSVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E N I+ +V + + +VVLT GTFL G IHIG GR GD P+ +L + Sbjct: 127 DLIVENNTITGVVTRMGLKFKAKSVVLTVGTFLDGKIHIGLENYSGGRAGDPPAIALSHR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +TI + + E+Q D FSFM + + RQI C IT Sbjct: 187 LRELPLRVARLKTGTPPRIDARTIDFSQLEQQLGDNPTPVFSFMGNVDQHPRQIPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q + ++ G+E I+RPGYAIEYD+ +P++L TLE+K I+GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVHSMKGMENARIVRPGYAIEYDFFDPRDLKQTLESKFINGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR + + R +YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARYAADENGWFPRRDQAYIGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL- 483 RMFTSRAEYR+ LR DNAD RLT G +LG + ++R + + + ++ R L+++ + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEKGRELGLVDDQRWEHYCRKVEMIEQERQRLRNIWVH 486 Query: 484 -TSKNLSSTSISFKQD-GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIE-----RL 536 S +L + K K + L P+ + + L S+ +F+ + E ++ Sbjct: 487 PHSDSLDEINQMLKAPLSKEANGEDLLRRPEMNYELLTSLP----RFTPGLTEPQAADQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y Y RQ E ++ E +P D DY + LSNE+ KL+ KP ++ QAS Sbjct: 543 EIQVKYEGYIARQQEEIEKQLRNENAALPLDLDYKQVNGLSNEVIAKLNDHKPSSIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKK 615 +I G+TPAA+++LL+++KK Sbjct: 603 RISGITPAAISILLVWLKK 621 >gi|190576265|ref|YP_001974110.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Stenotrophomonas maltophilia K279a] gi|190014187|emb|CAQ47831.1| putative tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Stenotrophomonas maltophilia K279a] Length = 629 Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust. Identities = 288/623 (46%), Positives = 388/623 (62%), Gaps = 21/623 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAG EAA AA+ G T L+TH T+G+MSCNPAIGG+GKGHLV+EIDAL Sbjct: 8 YDVIVIGGGHAGTEAALAAARTGVRTLLLTHNIETVGAMSCNPAIGGIGKGHLVKEIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M AD AGIQ+R LN KGPAVR R QADR LYR+A++ + Q+NL V Q V Sbjct: 68 GGAMAHAADRAGIQWRTLNASKGPAVRATRCQADRNLYRMAIRAIVEGQDNLTVFQAAVD 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + ++ Q VVLT GTFL G IH+G + AGRMGD P+ +L Sbjct: 128 DLVIEGDAVRGVITQTGLRFDAGAVVLTAGTFLAGKIHVGPTQYAAGRMGDPPATTLAAR 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + F RLKTGTP R+DG+++ + ++Q D SF+ + +Q+ C IT Sbjct: 188 LRERPFQVDRLKTGTPPRIDGRSLDYGVMDEQPGDSPRPVMSFLGSVDEHPQQVSCWITH 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T +TH+II + + S +YSG I+ GPRYCPSIEDK+VRF E+ HQIF+EPEGL Sbjct: 248 TTEQTHQIIRDALHRSPLYSGQIEGIGPRYCPSIEDKVVRFAEKASHQIFVEPEGLGIVE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q + +R+I G E +I RPGYAIEYD+ +P+ L +LETK ++GLF Sbjct: 308 IYPNGISTSLPFDVQLEMVRSIRGFENAHITRPGYAIEYDFFDPRGLKASLETKLVNGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR+ LD C R ++Y+GV++DDL + G EPY Sbjct: 368 FAGQINGTTGYEEAAAQGLLAGLNAARQVRGLDGWCPRRDEAYLGVLVDDLITHGTNEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLTP G ++G + + R F R+ L +L T Sbjct: 428 RMFTSRAEYRLQLREDNADQRLTPAGREMGLVDDHRWSAFETKQAAVAAERARLGALWAT 487 Query: 485 SKNLSSTSISFKQD------GKTRTAYEFLSYPDFSIQNLFSI------CPDARKFSSLV 532 N + QD + + + P+ L + DA+ V Sbjct: 488 PANALGREV---QDTLGVAVSRETNVLDLIKRPELDYAQLMQVPSLGPAVADAK-----V 539 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 E+++I YA Y RQ E + + E I + FDY+++ LS E +KL ++P + Sbjct: 540 AEQVEIGVKYAGYLDRQREEIERQQRHEATPIAEAFDYATVRGLSAEALQKLERVRPQTI 599 Query: 593 LQASKIEGMTPAALNLLLIYIKK 615 QA +I GMTPAA++LLL+++++ Sbjct: 600 GQAQRIPGMTPAAISLLLVHLER 622 >gi|149190485|ref|ZP_01868756.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio shilonii AK1] gi|148835739|gb|EDL52705.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio shilonii AK1] Length = 631 Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust. Identities = 291/625 (46%), Positives = 393/625 (62%), Gaps = 15/625 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA +A+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHETFDVIVVGGGHAGTEAALASARTGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAEAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRNALENTPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E++ + +V + +VVLT GTFL G IHIG GRMGD PS Sbjct: 122 QQSVDDLIVEQDQVRGVVTEMGLKFHSRSVVLTVGTFLGGKIHIGMESSSGGRMGDQPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + F RLKTGTP R+D +++ + E Q D FSFM ++ + QI Sbjct: 182 ALAARLRELPFRVDRLKTGTPPRIDARSVDFSALEVQHGDNPTPVFSFMGNRNQHPTQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CFITHTNESTHEVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTHELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 ISGLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 ISGLFFAGQINGTTGYEEAAAQGLMAGLNASLYSQGKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT LG I E+R RF + + R LK Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADIRLTEHAHNLGLIDEKRWSRFNEKLNNMATERQRLK 481 Query: 480 SLVLTSKN--------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL 531 + K+ L + IS + G+ L+Y + + F+ + ++ S Sbjct: 482 ETWVNPKSEGIEALNVLLKSPISREASGEDLLRRPELNYSQLTSLDAFAPAMEDQQAS-- 539 Query: 532 VIERLQIESSYAAYTGRQMIE-AKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 E+++I+ Y Y RQ E AK ++ E + IP D DYS + LSNE+ KL+ KP Sbjct: 540 --EQVEIQVKYEGYIQRQQDEIAKSLRHENTK-IPADLDYSDVKGLSNEVVAKLTEAKPE 596 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 + AS+I G+TPAA+++LL+Y+KK Sbjct: 597 TVGIASRISGITPAAISILLVYLKK 621 >gi|92115410|ref|YP_575338.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Chromohalobacter salexigens DSM 3043] gi|122419017|sp|Q1QSB9|MNMG_CHRSD RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|91798500|gb|ABE60639.1| glucose inhibited division protein A [Chromohalobacter salexigens DSM 3043] Length = 631 Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust. Identities = 286/614 (46%), Positives = 385/614 (62%), Gaps = 7/614 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FDVIVIGGGHAGTEAALAAARMGCQTLLLTHNIETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR Y+ A++ + +Q NL + Q Sbjct: 67 GGAMAHATDLGGIQFRVLNARKGPAVRATRAQADRVRYKAAIRGMLENQPNLTLFQQAAD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + +V Q + +VVL TGTFL GVIHIG GR GD PSN+L Sbjct: 127 DLIVENDTVRGVVTQTGIRVFGESVVLCTGTFLGGVIHIGLDHHAGGRAGDPPSNALAQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 F RLKTGTP RLD K++ + E Q D+ S++ + + RQ+ C I Sbjct: 187 LRALPFHVDRLKTGTPPRLDAKSVDFSVLETQPGDDPTPVMSYLGRRDQHPRQVACHIAH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I GPRYCPSIEDK+ RF +++ HQIF+EPEGL+T Sbjct: 247 TNARTHEIIHANLDRSPMYSGVIGGVGPRYCPSIEDKVNRFADKSSHQIFVEPEGLDTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q + +R+I G E +I RPGYAIEYD+ +P++L +LETK I LF Sbjct: 307 LYPNGISTSLPFDVQFEVVRSIKGFENAHITRPGYAIEYDFFDPRDLKHSLETKFIHNLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR++ D R ++Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARRAQGQDAWSPRRDEAYLGVLVDDLITMGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAE+R+ LR DNAD RLT IG +LG + + R F+ + L+ + Sbjct: 427 RMFTSRAEHRLLLREDNADLRLTEIGRELGLVDDTRWAHFSTKREAIARETERLRETWVQ 486 Query: 485 SKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 + + +S K D Y + L P+ N + DA + V E++QI++ Sbjct: 487 PSSELAKRLSGKLDKPLAREYRLADLLKRPEL---NHADLADDAPELDPAVAEQVQIQAK 543 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y RQ E ++ E +P+D DY+ + LS+E+++KL +P L QA +I G+ Sbjct: 544 YQGYIARQQDEIDRLRRHEALRLPEDLDYARIDGLSHEIRQKLEAARPETLAQAGRISGV 603 Query: 602 TPAALNLLLIYIKK 615 TPAA++LLL+++KK Sbjct: 604 TPAAVSLLLVHLKK 617 >gi|146284513|ref|YP_001174666.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas stutzeri A1501] gi|166222723|sp|A4VS73|MNMG_PSEU5 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|145572718|gb|ABP81824.1| glucose-inhibited division protein A [Pseudomonas stutzeri A1501] Length = 630 Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust. Identities = 290/621 (46%), Positives = 393/621 (63%), Gaps = 13/621 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FDVIVIGGGHAGTEAALAAARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAVATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIRELLENQPNLWIFQQAAD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E+N + +V Q ++VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 127 DLIVEQNEVRGVVTQMGLRFLATSVVLTTGTFLGGLIHIGLQNYSGGRAGDPPSIALAKR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + GRLKTGTP R+DG+++ + + +Q D L SF+ + + Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSQMTEQPGDTPLPVMSFLGSREQHPPQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF +++ HQ+FLEPEGL T Sbjct: 247 TNARTHEIIAANLDRSPMYSGVIEGVGPRYCPSIEDKIHRFADKDSHQVFLEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +++I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVQSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGANAALRAQGKDSWCPRRDEAYLGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LK+ + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCAKREGIEREEQRLKNSWVR 486 Query: 485 SKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSIC----PDARKFSSLVIERLQ 537 +I+ + Y L+ P+ Q+L + PD + V E+++ Sbjct: 487 PGTPQGDAIAERFGSPLAREYNLLNLLARPEIDYQSLIELTGPGEPDPQ-----VAEQVE 541 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I++ YA Y RQ E ++++ E +P D DY+++ LS E++ KL +P L QAS+ Sbjct: 542 IKTKYAGYIERQQDEIEKLRASENVALPADLDYATISGLSKEIQHKLGQARPQTLGQASR 601 Query: 598 IEGMTPAALNLLLIYIKKNTV 618 I G+TPAA++LL+I++KK + Sbjct: 602 IPGVTPAAVSLLMIHLKKRSA 622 >gi|169612247|ref|XP_001799541.1| hypothetical protein SNOG_09242 [Phaeosphaeria nodorum SN15] gi|160702466|gb|EAT83434.2| hypothetical protein SNOG_09242 [Phaeosphaeria nodorum SN15] Length = 691 Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust. Identities = 293/624 (46%), Positives = 400/624 (64%), Gaps = 15/624 (2%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 ++ YDVIVIGGGHAGCEA+A AA+ GA TALIT K +G SCNP+ GG+GKG ++REI Sbjct: 36 SQPYDVIVIGGGHAGCEASAAAARSGARTALITPKHDNLGVCSCNPSFGGIGKGTMLREI 95 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DALDG++GR+ D AG QFRVLN KKGPAV GPR Q DR LY+ M+ E+L+ E L V++G Sbjct: 96 DALDGVVGRIVDKAGTQFRVLNRKKGPAVWGPRAQIDRSLYKKYMKEEMLNYEGLSVLEG 155 Query: 123 EVA----------GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAG 172 VA G I+ + ++ +I VV+TTGTFL G IHIG P+G Sbjct: 156 SVADIIVDQTQEEGVKGRYGRITGVRLESGEIIPTGNVVITTGTFLGGEIHIGLDAYPSG 215 Query: 173 RMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK 232 RMG++ + L S F GRLKTGTP RLDGK+I + + Q D+ +PFS++ ++ Sbjct: 216 RMGEAATFGLSKSLRDAGFTLGRLKTGTPPRLDGKSINFKTLDAQEGDQPPMPFSYLNER 275 Query: 233 I-TNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGH 291 + +Q+ TRTN TH +I N+ S +K GPRYCPS+E K++RF ++ H Sbjct: 276 VQVEQQLLNHETRTNEATHDVIRNNLDKSIHIRETVK--GPRYCPSLESKVIRFTDKTSH 333 Query: 292 QIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKEL 351 I+LEPEG + DV+YPNGIS +P ++Q + ++T+ GLE VN+++PGY +EYDY++P+ L Sbjct: 334 IIWLEPEGFDNDVIYPNGISCTVPADVQIEMLKTVRGLENVNMLQPGYGVEYDYVDPRHL 393 Query: 352 FPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 TLETK ISGLFLAGQINGTTGYEEAA QG++AGIN+ +S + +R D YIG+M Sbjct: 394 RSTLETKNISGLFLAGQINGTTGYEEAAGQGVIAGINAGLRSLNKPAMILTRADGYIGIM 453 Query: 412 IDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEY 471 IDDL +KGV EPYRMFTSR+EYR+S R DNAD RLT G G + R F++ + Sbjct: 454 IDDLITKGVSEPYRMFTSRSEYRMSARADNADTRLTAKGHTAGVVRSPRWTAFSRDAADM 513 Query: 472 NFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL 531 L SLL+ L + + + + D R+AY+ L P + +L SI P FS Sbjct: 514 AELTSLLQEKTLGWSDWNKHGFAVRNDSTKRSAYDLLRLPSTTPSSLTSILPQIANFSPR 573 Query: 532 VIERLQIESSYAAYTGRQMI-EAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 + +R+ IES+YA Y Q + +A+ +K E RL P D Y ++ LS E K L + +P Sbjct: 574 IQDRVHIESTYAPYVAYQSVSQARWLKDEHLRL-PDDLSYEAIFGLSYEEKRALEVARPE 632 Query: 591 NLLQASKIEGMTPAALNLLLIYIK 614 ++ QA ++EG+TP LL ++K Sbjct: 633 SVGQARRVEGVTPTGALRLLQFVK 656 >gi|330935619|ref|XP_003305052.1| hypothetical protein PTT_17795 [Pyrenophora teres f. teres 0-1] gi|311318085|gb|EFQ86844.1| hypothetical protein PTT_17795 [Pyrenophora teres f. teres 0-1] Length = 692 Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust. Identities = 292/623 (46%), Positives = 399/623 (64%), Gaps = 15/623 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R YDVIVIGGGHAGCEA+A AA+ GA TALIT +G SCNP+ GG+GKG ++REID Sbjct: 39 RPYDVIVIGGGHAGCEASAAAARSGARTALITPSVHNLGVCSCNPSFGGIGKGTMIREID 98 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDG++GR+ D AG+QFRVLN KKGPAV GPR Q DR LY+ M++EIL + L V+QG Sbjct: 99 ALDGVVGRIVDKAGVQFRVLNRKKGPAVWGPRAQIDRALYKEYMKKEILGYKGLSVVQGS 158 Query: 124 VA----------GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGR 173 VA G + I+ + ++ +I VV+TTGTFL G IHIG P+GR Sbjct: 159 VADIIVDRSQEKGSKGQYGRITGVRLESGEIIPTENVVITTGTFLGGEIHIGLEAYPSGR 218 Query: 174 MGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI 233 MG++ + L S F GRLKTGTP RLDG TI + E Q D +PFS++ +++ Sbjct: 219 MGEAATFGLSKSLKDAGFTLGRLKTGTPPRLDGNTIDYKVLEAQEGDNPPMPFSYLNERV 278 Query: 234 -TNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQ 292 +Q+ TRTN TH II +N+ S +K GPRYCPS+E K++RF ++ H Sbjct: 279 QVEKQLLNHETRTNEATHDIIRQNLDKSIHIRETVK--GPRYCPSLESKVIRFADKTSHI 336 Query: 293 IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF 352 I+LEPEG N +VVYPNGIS +P ++Q+ ++TI GLE V +++PGY +EYDY++P+ L Sbjct: 337 IWLEPEGFNNNVVYPNGISCTVPADVQNTMLKTIKGLENVTMLQPGYGVEYDYVDPRHLR 396 Query: 353 PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMI 412 TLETK ISGLFLAGQINGTTGYEEAA QG++AGIN+ +S + + +R D YIG+MI Sbjct: 397 STLETKNISGLFLAGQINGTTGYEEAAGQGIIAGINAGLRSLGKEPMTLTRADGYIGIMI 456 Query: 413 DDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYN 472 DDL +KGV EPYRMFTSR+EYR+S R DNAD RLT +G G I + R K F+ ++ Sbjct: 457 DDLITKGVSEPYRMFTSRSEYRMSARADNADVRLTSLGRAAGVISDARWKAFSDEAEQME 516 Query: 473 FLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV 532 L LL+ + + + + D R+AY+ L P+ + Q+L + + F + Sbjct: 517 ALTKLLQDKTMGWTDWNKHGFKVRNDSTKRSAYDLLRLPNTTPQSLLPLIAEISCFPQHI 576 Query: 533 IERLQIESSYAAYTGRQMI-EAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 +R+ I ++YA Y Q + +A+ +K E +L P D DY S+ LS E K L + +P + Sbjct: 577 QDRVHINATYAPYVEYQAVSQARWLKDENLKL-PDDLDYESIFGLSFEEKRALEVARPES 635 Query: 592 LLQASKIEGMTPAALNLLLIYIK 614 + A ++EG+TP LL Y++ Sbjct: 636 VGMARRVEGVTPTGALRLLQYVR 658 >gi|77166531|ref|YP_345056.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Nitrosococcus oceani ATCC 19707] gi|254436296|ref|ZP_05049803.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Nitrosococcus oceani AFC27] gi|123593188|sp|Q3J6M0|MNMG_NITOC RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|76884845|gb|ABA59526.1| Glucose-inhibited division protein A subfamily [Nitrosococcus oceani ATCC 19707] gi|207089407|gb|EDZ66679.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Nitrosococcus oceani AFC27] Length = 629 Score = 553 bits (1424), Expect = e-155, Method: Compositional matrix adjust. Identities = 293/619 (47%), Positives = 400/619 (64%), Gaps = 12/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 Y+VIV+GGGHAG EAA AA+ G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA Sbjct: 6 QYEVIVVGGGHAGTEAALAAARQGVRTLLLTHNIETLGQMSCNPAIGGIGKGHLVKEIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLM + AD AGI FR+LN +KGPAVR R QADR LY+ +++ + Q L + Q V Sbjct: 66 LGGLMAQAADQAGIHFRMLNARKGPAVRATRAQADRALYKAVVRKALEQQSCLSLFQQAV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + + + Q VVLT GTFL G IH+G GR GD P+N L + Sbjct: 126 TDLVVKGERVVGVRTQLGLTFYAPAVVLTVGTFLGGRIHVGLTNHEGGRAGDPPANILSS 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQIECGIT 243 + F RLKTGTP R+DG++I + + E Q D+ + FSF+ + + +Q+ C IT Sbjct: 186 RLRELPFRVARLKTGTPPRIDGRSIDYSQLEVQPGDDPVPVFSFLGSAEDHPQQVSCHIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 RTNL TH II ++ S IYSG+I+ GPRYCPSIEDK+VRF ++ HQIF+EPEGL T Sbjct: 246 RTNLCTHEIIRASLDRSPIYSGEIEGIGPRYCPSIEDKVVRFSDKASHQIFIEPEGLETF 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q +R+I G E+ +I RPGYAIEYD+ +P++L P+LET + GL Sbjct: 306 EIYPNGISTSLPFDVQVALVRSIQGFEQAHITRPGYAIEYDFFDPRDLKPSLETSFLQGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGTTGYEEAAAQGL+AG+N+ + + + R ++YIGV+IDDL + G EP Sbjct: 366 YFAGQINGTTGYEEAAAQGLIAGLNAGLQVQEKEPWYPRRDEAYIGVLIDDLITCGTSEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF---AKYIQEYNFLRSLLKS 480 YRMFTSRAEYR+ LR DNAD RLTPIG +L + E R +RF K I+ N + L++ Sbjct: 426 YRMFTSRAEYRLLLREDNADLRLTPIGRELRVVDEVRWRRFNTKWKAIEREN--QRLVQQ 483 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 + K +++ + R Y E L P S + L + + V E++ Sbjct: 484 RIEPDKVSEGEAVTLLGE-PLRREYRLIELLRRPHISYEKLMRLIGEPMAVEPAVAEQIA 542 Query: 538 IESSYAAYTGRQMIE-AKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 I++ YA Y RQ +E A++ + E RL P D +Y + LS E++EKL+ ++P L QA+ Sbjct: 543 IQAKYAGYIERQQLEIARQQRHESLRL-PLDLNYHQVRGLSVEVQEKLARVQPATLGQAT 601 Query: 597 KIEGMTPAALNLLLIYIKK 615 +I G+TPAA++LLL+Y+K+ Sbjct: 602 RIPGVTPAAISLLLVYLKR 620 >gi|326314883|ref|YP_004232555.1| glucose inhibited division protein A [Acidovorax avenae subsp. avenae ATCC 19860] gi|323371719|gb|ADX43988.1| glucose inhibited division protein A [Acidovorax avenae subsp. avenae ATCC 19860] Length = 655 Score = 553 bits (1424), Expect = e-155, Method: Compositional matrix adjust. Identities = 295/641 (46%), Positives = 398/641 (62%), Gaps = 27/641 (4%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DVIV+GGGHAG EAA AA++G+ T L+TH T+G MSCNP+IGG+GKGHLV+E+D Sbjct: 5 QEFDVIVVGGGHAGTEAALAAARMGSRTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D GIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q Sbjct: 65 ALGGAMALATDEGGIQFRILNSSKGPAVRATRAQADRILYKAAIRRMLENQPNLWLFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + + V Q R TVVLT GTFL G IH+G AGR GD P+ SL Sbjct: 125 VDDLMVEGDRVVGAVTQVGIRFRSRTVVLTAGTFLDGKIHVGLNNYSAGRAGDPPAVSLS 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFAD-------ERLIP-FSFMTDKITN 235 + GRLKTGTP R+DG++I + + E+Q D E +P FSFM + + Sbjct: 185 ARLKELQLPQGRLKTGTPPRIDGRSIDFSQCEEQPGDGMPGGVNEGTLPVFSFMGNTAMH 244 Query: 236 -RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 RQ+ C IT TN TH II S +++G I+ GPRYCPS+EDKI RF +++ HQIF Sbjct: 245 PRQVPCWITHTNERTHEIIRSGFDRSPMFTGKIEGVGPRYCPSVEDKINRFADKDSHQIF 304 Query: 295 LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT 354 LEPEGL T YPNGIST+LP ++Q+ +R++ GLE +I+RPGYAIEYDY +P+ L + Sbjct: 305 LEPEGLTTHEFYPNGISTSLPFDVQYDLVRSMRGLENAHILRPGYAIEYDYFDPRSLKSS 364 Query: 355 LETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDD 414 ET++I GLF AGQINGTTGYEEAAAQGL AGIN+A + R ++Y+GV++DD Sbjct: 365 FETRQIQGLFFAGQINGTTGYEEAAAQGLFAGINAALQCRGESAWLPRRDEAYLGVLVDD 424 Query: 415 LTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFL 474 L +KGV EPYRMFTSRAE+R+ LR DNAD RLT G ++G + + R F++ Sbjct: 425 LITKGVTEPYRMFTSRAEFRLQLREDNADMRLTEAGRRMGLVDDARWDAFSRKRDAVARE 484 Query: 475 RSLLKSLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL 531 LKS + +NL S + K ++ L PD + + L + D K++S Sbjct: 485 TERLKSTWVNPRNLPAEESARVLGKSIEHEYNLFDLLRRPDVTYEALTGM--DGGKYAST 542 Query: 532 -------------VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSN 578 VIE+++I + YA Y RQ E + E +P++ DY + ALS Sbjct: 543 AVSRETLGELSAPVIEQVEIAAKYAGYIDRQKDEVQRASHYENLQLPQELDYMQVAALSI 602 Query: 579 ELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 E+++KL +P L QAS+I G+TPAA++LLL+++KK + Sbjct: 603 EVRQKLQKHRPETLGQASRISGVTPAAVSLLLVHLKKGGFR 643 >gi|227354887|ref|ZP_03839302.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme (glucose-inhibited division protein A) [Proteus mirabilis ATCC 29906] gi|227165040|gb|EEI49876.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme (glucose-inhibited division protein A) [Proteus mirabilis ATCC 29906] Length = 632 Score = 553 bits (1424), Expect = e-155, Method: Compositional matrix adjust. Identities = 294/617 (47%), Positives = 392/617 (63%), Gaps = 7/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA+ Sbjct: 7 FDVIVIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAM 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMATAIDHAGIQFRTLNASKGPAVRATRAQADRVLYRQAIRTTLENQPNLMIFQQPVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + ++ V + R VVLT GTFL G IHIG GR GD PS SL + Sbjct: 127 DLIVENDQVTGAVTRMGLKFRAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPSVSLSHR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +TI + + Q D + FSF+ + + Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSQLAPQLGDNPMPVFSFLGNVDQHPEQMPCHITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH II N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEQTHEIIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNSHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q + ++ G+E IIRPGYAIEYD+ +P++L TLE+K I+GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVNSMKGMENAKIIRPGYAIEYDFFDPRDLKQTLESKFINGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR + + R +YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARYAFDQEGWFPRRDQAYIGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R +F++ ++ R L+ + + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGMVDDNRWAQFSEKVELVEKERQRLRDIWVH 486 Query: 485 SK--NLSSTSISFKQD-GKTRTAYEFLSYPDFSIQNLFSI---CPDARKFSSLVIERLQI 538 K NL + K K + L P+ + + L I P E+++I Sbjct: 487 PKADNLEEINQLLKTPLSKEANGEDLLRRPEMTYEILKKIPRFAPGIDDSRPQAAEQVEI 546 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + Y Y RQ E ++ E +P D DY + LSNE+ KL+ KP ++ QAS+I Sbjct: 547 QVKYEGYINRQQEEIEKQLRNESAALPIDIDYKQVSGLSNEVIAKLNDHKPTSIGQASRI 606 Query: 599 EGMTPAALNLLLIYIKK 615 G+TPAA+++LL+++KK Sbjct: 607 SGVTPAAISILLVWLKK 623 >gi|269103813|ref|ZP_06156510.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Photobacterium damselae subsp. damselae CIP 102761] gi|268163711|gb|EEZ42207.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Photobacterium damselae subsp. damselae CIP 102761] Length = 629 Score = 553 bits (1424), Expect = e-155, Method: Compositional matrix adjust. Identities = 294/622 (47%), Positives = 392/622 (63%), Gaps = 15/622 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DA Sbjct: 6 NFDVIVVGGGHAGTEAALAAARMGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLM R D GIQFR LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 66 LGGLMARAIDKGGIQFRTLNSSKGPAVRATRAQADRALYKAAVREALENQPNLMLFQQAV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E++ + V + R VVLT GTFL G IHIG GR GD PS +L + Sbjct: 126 TDLIVEQDRVVGAVTEMGLKFRAKAVVLTVGTFLGGRIHIGLENYNGGRAGDPPSIALAH 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 + F RLKTGTP R+D +T+ + EKQF D FSFM + + RQI C IT Sbjct: 186 RLRELPFRVSRLKTGTPPRIDARTVDFSVLEKQFGDNPTPVFSFMGKQSDHPRQIPCFIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEGL T Sbjct: 246 HTNERTHDVIRNNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADKNSHQIFIEPEGLTTH 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK ++GL Sbjct: 306 ELYPNGISTSLPFDVQMQIVRSMKGFENADIVRPGYAIEYDFFDPRDLKQTFETKFMAGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+A + D R +Y+GV+IDDL++ G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGMNAALCAQGKDGWSPRRDQAYMGVLIDDLSTIGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT +G + G + + R RF + I+ R LK + + Sbjct: 426 YRMFTSRAEYRLLLREDNADLRLTEMGRQFGLVDDERWARFNQKIENMEQERQRLKDIWI 485 Query: 484 TSKN--------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIE 534 + + T I + G+ + L P+ + L +I + E Sbjct: 486 NPNSAQVDELNKILKTPIVREASGE-----DLLRRPEVTYDMLTAIETFGPALEDTQASE 540 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E ++ EK +P D DYS + LSNE+ KL+ KP + Sbjct: 541 QVEIQVKYQGYIDRQKDEVEKSLRHEKTKLPFDLDYSVVKGLSNEVIAKLNDAKPETVGM 600 Query: 595 ASKIEGMTPAALNLLLIYIKKN 616 AS+I G+TPAA++LLL+Y+KK Sbjct: 601 ASRISGVTPAAISLLLVYLKKQ 622 >gi|90413743|ref|ZP_01221731.1| glucose-inhibited division protein A [Photobacterium profundum 3TCK] gi|90325212|gb|EAS41709.1| glucose-inhibited division protein A [Photobacterium profundum 3TCK] Length = 629 Score = 553 bits (1424), Expect = e-155, Method: Compositional matrix adjust. Identities = 293/626 (46%), Positives = 397/626 (63%), Gaps = 23/626 (3%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DA Sbjct: 6 NFDVIVVGGGHAGTEAALAAARMGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLM + D GIQFR LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 66 LGGLMAKATDKGGIQFRTLNSSKGPAVRATRAQADRALYKAAVREALENQPNLMLFQQAV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + +V + R ++VVLT GTFL G IHIG GR GD PS +L + Sbjct: 126 DDLIVENDRVIGVVTEMGLKFRATSVVLTVGTFLGGKIHIGLENYSGGRAGDPPSIALAS 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 + F RLKTGTP R+D +T+ + + + Q D + FSFM + RQI C IT Sbjct: 186 RLRELPFRVDRLKTGTPPRIDARTVDFSRLQAQHGDNPIPTFSFMGKTSDHPRQIPCYIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +YSG I+ GPRYCPSIEDK++RF ++N HQIF+EPEGL T Sbjct: 246 YTNEKTHDVIRNNLDRSPMYSGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEGLTTH 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q Q +R++ G E I+RPGYAIEYD+ +P++L T ETK I GL Sbjct: 306 ELYPNGISTSLPFDVQIQIVRSMDGFENAAIMRPGYAIEYDFFDPRDLKQTFETKFIDGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+A +S + C R +Y+GV+IDDL++ G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGMNAALQSQGKEGWCPRRDQAYMGVLIDDLSTMGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LK + + Sbjct: 426 YRMFTSRAEYRLLLREDNADLRLTEIGRELGLVDDDRWARFNQKVENIEQERQRLKDIWI 485 Query: 484 TSKN--------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVI-- 533 + + T I+ + +G+ + L P+ + + + FS I Sbjct: 486 NPNSDHVDEINKILKTPIAREANGE-----DLLRRPEIT----YKLLTQLEDFSPAHIDT 536 Query: 534 ---ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 E+++ + Y Y RQ E ++ E +P D DYS + LSNE+ KL+ KP Sbjct: 537 QASEQVETQVKYQGYIDRQKDEVEKSLRHETTKLPFDLDYSIVKGLSNEVIAKLTDAKPE 596 Query: 591 NLLQASKIEGMTPAALNLLLIYIKKN 616 + AS+I G+TPAA++LLL+Y+KK+ Sbjct: 597 TIGMASRISGITPAAISLLLVYLKKH 622 >gi|119471638|ref|ZP_01614023.1| glucose-inhibited division protein A [Alteromonadales bacterium TW-7] gi|119445417|gb|EAW26704.1| glucose-inhibited division protein A [Alteromonadales bacterium TW-7] Length = 629 Score = 553 bits (1424), Expect = e-155, Method: Compositional matrix adjust. Identities = 291/621 (46%), Positives = 400/621 (64%), Gaps = 5/621 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA AA++G +T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 IFHENFDVIVVGGGHAGTEAALAAARMGMNTLLLTHNMDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G M + D GIQFR LN KGPAVR R QADR LY+ A+Q + +QENL + Sbjct: 62 EIDALGGAMAQAIDKGGIQFRTLNSSKGPAVRATRAQADRALYKAAIQTTLQNQENLKIF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q E + ++ +V Q +VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQSCDDLIVENDRVTGVVTQMGLRFSAPSVVLTVGTFLGGQIHIGLENYKGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + F RLKTGTP R+D +T+ + K ++Q D FSF+ + + +QI Sbjct: 182 ALAQRLREQPFRVDRLKTGTPPRIDARTVDFSKMQEQPGDAPTPVFSFLGKQSDHPQQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I +N+ S +YSG I+ GPRYCPSIEDKIVRF +++ HQIF+EPEG Sbjct: 242 CYITYTNEKTHDVIRKNLHRSPMYSGVIEGIGPRYCPSIEDKIVRFADKDKHQIFVEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L + +YPNGIST+LP ++Q + +++I G E +I RPGYAIEYDY +P++L +LETK Sbjct: 302 LTSYELYPNGISTSLPFDVQLEIVQSITGFENAHICRPGYAIEYDYFDPRDLKQSLETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEA AQGL+AG+N+A K D R ++Y+GV+IDDL + G Sbjct: 362 IEGLFFAGQINGTTGYEEAGAQGLIAGMNAALKVQGKDSWTPRRDEAYVGVLIDDLATLG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT G +LG + + R + F + ++ + +K Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADIRLTEKGRELGLVNDERWQAFNEKMEIIEKEKQRIK 481 Query: 480 SLVLTSKNLSSTSI-SFKQDGKTRTAY--EFLSYPDFSIQNLFSICPDARKFSS-LVIER 535 + + + + + TR A E L P+ +L +I +F++ +E+ Sbjct: 482 DTWIHKDHTVVDQVNALLKAPLTREASLEELLRRPEIRYDDLMAIEGLGSEFTNKAALEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I + YA Y RQ E + E+ ++PK+FDY ++ LSNE+ KL +P + QA Sbjct: 542 VEIHTKYAGYIARQQDEINKQLRHEETILPKEFDYKTVSGLSNEVVAKLEESRPDTIGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKKN 616 S+I G+TPAA++LLL+Y+KK Sbjct: 602 SRISGITPAAISLLLVYLKKQ 622 >gi|15600758|ref|NP_254252.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas aeruginosa PAO1] gi|21263691|sp|Q9HT09|MNMG_PSEAE RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|9951906|gb|AAG08950.1|AE004968_4 glucose-inhibited division protein A [Pseudomonas aeruginosa PAO1] Length = 630 Score = 553 bits (1424), Expect = e-155, Method: Compositional matrix adjust. Identities = 293/614 (47%), Positives = 383/614 (62%), Gaps = 5/614 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FDVIVIGGGHAGTEAALAAARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAEATDKGGIQFRILNSRKGPAVRATRAQADRVLYKAAIRHTLENQPNLWIFQQACD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 127 DLIVEQDQVRGVVTQMGLRFHADNVVLTTGTFLGGLIHIGLENYSGGRAGDPPSIALARR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ K + Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGSKEQHPEQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+FLEPEGL T Sbjct: 247 TNARTHEIIAANLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFLEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R+I G+E +I+RPGYAIEYD+ +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVRSIRGMENAHIVRPGYAIEYDFFDPRDLRYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A +S D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGANAALRSQGKDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + +RR F + LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDRRWAAFEAKREGIEREEQRLKSTWVR 486 Query: 485 SKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +I+ + Y LS P+ L I +A + V E+++I + Sbjct: 487 PNTPQGDAIAERFGTPLTHEYNLLNLLSRPEIDYAGLVEITGNAVD-NPQVAEQVEIRTK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E ++ E +P D DY + LS E++ KL+ +P L QAS+I G+ Sbjct: 546 YAGYIDRQQEEISRLRASEDTRLPVDIDYLGISGLSKEIQNKLNQARPETLGQASRIPGV 605 Query: 602 TPAALNLLLIYIKK 615 TPAA++LLLI++KK Sbjct: 606 TPAAISLLLIHLKK 619 >gi|308051498|ref|YP_003915064.1| glucose inhibited division protein A [Ferrimonas balearica DSM 9799] gi|307633688|gb|ADN77990.1| glucose inhibited division protein A [Ferrimonas balearica DSM 9799] Length = 629 Score = 553 bits (1424), Expect = e-155, Method: Compositional matrix adjust. Identities = 282/616 (45%), Positives = 393/616 (63%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAG EAA +A+ GA T L+TH T+G MSCNPAIGG+GKGHLV+EIDAL Sbjct: 7 YDVIVVGGGHAGTEAALASARTGARTLLLTHNLDTLGQMSCNPAIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M R D AGIQFR LN KGPAVR R QADR LYR A+Q+ + +Q NL + Q V Sbjct: 67 GGAMARATDRAGIQFRTLNASKGPAVRATRAQADRALYRQAIQQILFNQPNLQIFQQGVN 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + ++ ++ VVLT GTFL G IHIG GR+GD+ + L + Sbjct: 127 DLILEGDKVTGVITDAGIHFGAEAVVLTVGTFLDGKIHIGLDNYAGGRIGDTNAVRLAHR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTPARLD +++ + ++Q D FS++ D+ RQI C IT Sbjct: 187 LRELPLRIDRLKTGTPARLDARSLDFSVMQEQPGDNPTPVFSYIGDRSEQPRQISCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II + S +Y+G I+ GPRYCPS+EDK++RF ++ HQIF+EPEGLN+ Sbjct: 247 TNERTHEIIRSGLDRSPMYTGVIEGIGPRYCPSVEDKVMRFADKTSHQIFVEPEGLNSIE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q + +R+I G E+ I+RPGYAIEYD+ +P++L +LE+K + GLF Sbjct: 307 IYPNGISTSLPFDVQLELVRSIKGFEQARILRPGYAIEYDFFDPRDLKASLESKFLEGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG+N+AR+ + R +Y+GV++DDL++ G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGLNAARRVRGEESWAPRRDQAYLGVLVDDLSTLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAE+R+ LR DNAD RLT +G ++G I + R +F ++ R L+S + Sbjct: 427 RMFTSRAEHRLLLREDNADLRLTEMGREMGLIDDERWAKFNAKVEAIELERQRLRSTWVQ 486 Query: 485 SKNLSSTSIS-FKQDGKTRTA--YEFLSYPDFSIQNLFSICPDARKFS-SLVIERLQIES 540 + ++ +++ + TR A + L P+ + + ++ E+++I+ Sbjct: 487 KDSAAAAALNPLLKSPMTREANLEDLLRRPELTYDQIMAVEDLGPALDHEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 YA Y RQ E ++ + E+ L+P D DY + LSNE+ KL KP L AS+I G Sbjct: 547 KYAGYIERQKDEIEKARRHEQTLLPLDLDYRQVKGLSNEVMAKLMEHKPETLGSASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA++LLL+Y+KK+ Sbjct: 607 VTPAAISLLLVYLKKH 622 >gi|212637844|ref|YP_002314369.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shewanella piezotolerans WP3] gi|226704797|sp|B8CVV6|MNMG_SHEPW RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|212559328|gb|ACJ31782.1| Glucose-inhibited division protein A subfamily [Shewanella piezotolerans WP3] Length = 629 Score = 552 bits (1423), Expect = e-155, Method: Compositional matrix adjust. Identities = 292/620 (47%), Positives = 384/620 (61%), Gaps = 15/620 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++G+ T L+TH T+G MSCNPAIGG+GKGHLV+EIDAL Sbjct: 7 FDVIVVGGGHAGTEAALASARMGSKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D AGIQFR LN KGPAVR R QADR LYR +Q + Q NL + Q V Sbjct: 67 GGAMAIATDYAGIQFRTLNSSKGPAVRATRAQADRALYRHKIQEILQHQPNLRIFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + +V Q VVLTTGTFL G IHIG GR GD P+ +L + Sbjct: 127 DLVVENETVVGVVTQMGLAFEAPAVVLTTGTFLSGKIHIGLENYSGGRAGDPPAIALAHR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D TI + K +Q D+ L SF+ D + Q+ C IT Sbjct: 187 LQELPIRVGRLKTGTPPRIDANTIDFSKMTEQKGDDPLPVMSFIGDVNQHPEQVSCHITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II + S +YSG I+ GPRYCPSIEDKI RF ++N HQIF+EPEGLNT Sbjct: 247 TNERTHDIIRAGLDRSPMYSGVIEGIGPRYCPSIEDKINRFADKNSHQIFIEPEGLNTTE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q +R+I G+E I+RPGYAIEYDY +P++L +LETK I+GLF Sbjct: 307 IYPNGISTSLPFDVQLNLVRSIKGMENAEIMRPGYAIEYDYFDPRDLKNSLETKTINGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG+N++ + + C R +Y+GV++DDL++ G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGMNASLQIQGKETWCPRRDQAYLGVLVDDLSTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R +F+ ++ L+S + Sbjct: 427 RMFTSRAEYRLLLREDNADLRLTEKGRELGLVDDERWAKFSDKMESIETELQRLRSQWIH 486 Query: 485 SKN--LSSTSISFKQD-GKTRTAYEFLSYPDFSIQNLFSI------CPDARKFSSLVIER 535 ++ + + K + T + L P+ L SI D R E+ Sbjct: 487 PRSPLVDVLNPHLKTPIAREATFEDLLRRPELDYPTLMSIDGFGPGIDDQR-----AAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 +QI+ Y+ Y RQ E + E +P D DY +P LSNE+ K++ KP + QA Sbjct: 542 VQIQVKYSGYIQRQQDEIDKAIRHETTGLPLDLDYQEVPGLSNEVIAKMNEHKPETVGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I GMTPAA+++LL+++KK Sbjct: 602 SRISGMTPAAISILLVHLKK 621 >gi|1780760|emb|CAA71459.1| unnamed protein product [Coxiella burnetii] Length = 627 Score = 552 bits (1423), Expect = e-155, Method: Compositional matrix adjust. Identities = 295/620 (47%), Positives = 398/620 (64%), Gaps = 9/620 (1%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 ++ +DVI +GGGHAG EAA VAA++GA T L+TH T+G MSCNPAIGG+GK HLV+EI Sbjct: 5 SQQFDVIAVGGGHAGTEAALVAARMGARTLLLTHNIETLGQMSCNPAIGGIGKSHLVKEI 64 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G+M AD AGI FR LN +KGPAVR R QADR LY+ A+ + +Q +L + Q Sbjct: 65 DALGGIMALAADQAGIHFRTLNARKGPAVRATRAQADRVLYKAAIHHALENQPHLWLFQQ 124 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 V + N + +V Q TV+LT GTFL G IHIG GR GD P+ +L Sbjct: 125 GVDDLIIQNNRAAGVVTQMGLAFYAPTVILTVGTFLGGKIHIGMNHYRGGRAGDPPALAL 184 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECG 241 + F RLKTGTP R+DG+TI + + +Q +D+ L S+ + + RQ+ C Sbjct: 185 AERLREMPFRVERLKTGTPPRIDGRTINYYQLIEQPSDQPLPLMSYWSHGEDHPRQVSCF 244 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT+TN +TH II +K S ++SG I+ GPRYCPSIEDKIVRF +RN H++FLEPEG+N Sbjct: 245 ITQTNEKTHDIIRNGLKTSPLFSGVIEGVGPRYCPSIEDKIVRFADRNSHRLFLEPEGIN 304 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T VYPNG+ST+L ++Q I + GL K +I RPGY IEYDY +P++L P+LETK + Sbjct: 305 TPEVYPNGLSTSLSFDVQLDVIHSKTGLAKCHITRPGYTIEYDYFDPRDLKPSLETKYVP 364 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GL+ AGQINGTTGYEEAAAQGL+AGIN+A + + +R ++YIGV+IDDLT++G Sbjct: 365 GLYFAGQINGTTGYEEAAAQGLIAGINAALQIQERAPWTPARDEAYIGVLIDDLTTRGTN 424 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+ LR DNAD RLT G LGC+ + R F K + + LK Sbjct: 425 EPYRMFTSRAEYRLLLRQDNADLRLTEKGRDLGCVDDERWNFFVKKKETIEKEQQRLKKQ 484 Query: 482 VLTSKNLSSTSIS--FKQ-DGKTRTAYEFLSYPDFSIQNLFSI---CPDARKFSSLVIER 535 + K+ + +I F+Q + +A + L P+ + L I P + S V E+ Sbjct: 485 RIWPKSTVAKAIESRFQQLLERDYSAMDLLRRPEINYPALMQIEELGPAVLEPS--VAEQ 542 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 + I++ Y Y Q+ E K + IP DY+ + LSNE+++KL+ KP L QA Sbjct: 543 IDIQAKYEGYLTHQLAEIARQKKYQTAQIPSSLDYNQVTGLSNEVRQKLNETKPTTLGQA 602 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G+TPAA++LLL+++KK Sbjct: 603 SRIPGITPAAISLLLVHLKK 622 >gi|239993739|ref|ZP_04714263.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Alteromonas macleodii ATCC 27126] Length = 633 Score = 552 bits (1423), Expect = e-155, Method: Compositional matrix adjust. Identities = 290/619 (46%), Positives = 393/619 (63%), Gaps = 9/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+GGGHAG EAA AA++GA+T L+TH TIG MSCNPAIGG+GKGHLV+EIDA Sbjct: 6 AFDVIVVGGGHAGTEAALAAARMGANTLLLTHNIETIGQMSCNPAIGGIGKGHLVKEIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D GIQFR LN KGPAVR R QADR LY+ A++ + +QENL + Q V Sbjct: 66 LGGAMALAIDKGGIQFRTLNSSKGPAVRATRAQADRTLYKNAIRDIVENQENLTLFQQSV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + +V Q + +VVLT GTFL G IHIG GR GD PS +L + Sbjct: 126 DDLIVENDQVCGVVTQMGLKFKAKSVVLTVGTFLGGTIHIGLENYRGGRAGDPPSIALAD 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 F RLKTGTPARLD +++ + + Q D FSFM D+ + QI C IT Sbjct: 186 RLRALPFRVDRLKTGTPARLDARSLDFSVMQPQPGDNPTPVFSFMGDRTMHPTQIPCYIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH II + S +++G I+ GPRYCPSIEDKI RF ++ HQIF+EPEGLN+ Sbjct: 246 HTNEKTHDIIRGGLDRSPMFTGVIEGIGPRYCPSIEDKITRFADKTSHQIFVEPEGLNSI 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNGIST+LP ++Q +R+I G E +I+RPGYAIEYD+ +P++L TLETK I GL Sbjct: 306 EVYPNGISTSLPFDVQMNLVRSIKGFENAHIVRPGYAIEYDFFDPRDLKQTLETKFIRGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEA AQGLVAG N+A + + D + R +Y+GV+IDDL + G EP Sbjct: 366 FFAGQINGTTGYEEAGAQGLVAGANAALQVQEKDPMILRRDQAYMGVLIDDLATMGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD+RLT +G ++G + + R +F ++ L+ + Sbjct: 426 YRMFTSRAEYRLLLREDNADSRLTAMGREIGLVDDARWAKFNDKMEAVESELQRLRGQWI 485 Query: 484 TSKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLF---SICPDARKFSSLVIERLQ 537 + ++ ++ + + E + P+ + L S+ P + E+++ Sbjct: 486 HPDHAATPELNTMLKNPVSREHSLEELIRRPEMTYGQLMEIESVGPGLE--DPVAAEQVE 543 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ YA Y RQM E + + E L+P D D+S + LSNE+ KL+ +P + +AS+ Sbjct: 544 IQIKYAGYIARQMDEIAKTQRHENTLLPVDMDFSKISGLSNEVVAKLTEARPETIGKASR 603 Query: 598 IEGMTPAALNLLLIYIKKN 616 I G+TPAA++LLL+Y+KK+ Sbjct: 604 ISGITPAAISLLLVYLKKH 622 >gi|32490750|ref|NP_871004.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|31340132|sp|Q8D3K0|MNMG_WIGBR RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|25165956|dbj|BAC24147.1| gidA [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 628 Score = 552 bits (1423), Expect = e-155, Method: Compositional matrix adjust. Identities = 308/633 (48%), Positives = 412/633 (65%), Gaps = 24/633 (3%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + D+I++GGGHAG EAAAVAAK+ +T LIT TIG MSCNP+IGG+GKGHLV+EID Sbjct: 6 KEIDIIIVGGGHAGTEAAAVAAKMKCNTMLITQNIDTIGQMSCNPSIGGIGKGHLVKEID 65 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 A+ G+MG AD +GIQFR LN KGPAVR R Q DR+LY +Q+ + +Q+NL ++Q E Sbjct: 66 AMGGIMGIAADNSGIQFRTLNSSKGPAVRATRAQIDRKLYSSLIQKILSNQKNLYLLQQE 125 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V EKN I +V +I+ V++TTGTFL G IHIG + +GR G+ S L Sbjct: 126 VIDILVEKNKIKGVVTNAGLIIKSKIVIITTGTFLNGKIHIGNKQYVSGRSGEFSSIKLS 185 Query: 184 NSFM-KFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNRQIECG 241 KF F RLKTGTP R+D K++ + K E Q+ D + FSFM I +Q+ C Sbjct: 186 QILKEKFCFRINRLKTGTPPRIDLKSVNFSKLESQYGDTPIPQFSFMKFVGIRPKQLPCY 245 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT TN TH II++NIKHS IY+G IK GPRYCPSIEDK+VRF ++ HQIFLEPEGLN Sbjct: 246 ITYTNKNTHNIIIDNIKHSPIYNGSIKGIGPRYCPSIEDKVVRFSKKESHQIFLEPEGLN 305 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 +YPNGIST+LP +Q + IR+I GLE NI RPGY+IEYD+++P++L TLE+K IS Sbjct: 306 NYEIYPNGISTSLPLNLQIKIIRSIKGLESANITRPGYSIEYDFLDPRDLKLTLESKIIS 365 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQINGTTGYEEAAAQGL++GIN+A R+ +Y+GV+IDDL + G Sbjct: 366 GLFFAGQINGTTGYEEAAAQGLLSGINAALMLKNGSFWFPKRSQAYLGVLIDDLCTLGTK 425 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSR+E+R+ +R DNAD RLT IG KLG I + R F YN + K + Sbjct: 426 EPYRMFTSRSEHRLIIREDNADLRLTEIGRKLGIIEDDRWNNF------YNKKNIIYKEI 479 Query: 482 VLTSKNLSSTSISFKQDGKTR-----------TAYEFLSYPDFSIQNLFSICPDARKFSS 530 KNL +T I F ++ K + TA E L P+ + +L RK Sbjct: 480 ----KNLKNTKILFNKEEKNKINLNINKSGSITAEEILRRPEITYNDLICYNFIKRKLKD 535 Query: 531 -LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 +I++++I+ YA Y RQ E + + + ++P + ++ + LS E+ EKL+I KP Sbjct: 536 EEIIKQIEIQIKYAGYIKRQEKEINKKTYYDNIILPNEINFKKISGLSKEVIEKLNIFKP 595 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKKNTVKLNE 622 ++ QA KI G+TPAA++++LI++KKN + N+ Sbjct: 596 TSIGQAIKISGITPAAISIILIWLKKNNLMYNK 628 >gi|254788523|ref|YP_003075952.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Teredinibacter turnerae T7901] gi|259495854|sp|C5BKL4|MNMG_TERTT RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|237684306|gb|ACR11570.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Teredinibacter turnerae T7901] Length = 630 Score = 552 bits (1422), Expect = e-155, Method: Compositional matrix adjust. Identities = 286/614 (46%), Positives = 388/614 (63%), Gaps = 5/614 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EA AA++G T L++H T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FDVIVIGGGHAGTEACLAAARMGCKTLLLSHNIETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAKATDKGGIQFRVLNNRKGPAVRATRAQADRVLYKAAVREILENQPNLTIFQQAAD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + +V Q TVVLT GTFL G IHIG GR GD PS +L + Sbjct: 127 DLVVEGETVRGVVTQMGVTFLAPTVVLTAGTFLGGRIHIGLENHSGGRAGDPPSIALADR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +++ +D ++Q+ D+ SF+ + + RQ C +T Sbjct: 187 LRELPLRVDRLKTGTPPRIDARSVNFDGLDEQWGDKPTPVMSFLGSQDDHPRQTCCWVTH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II S +++G I+ GPRYCPSIEDK+ RF ++N HQIF+EPEGL T Sbjct: 247 TNERTHDIIRSGFDRSPMFTGVIEGVGPRYCPSIEDKVNRFADKNSHQIFIEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP +IQ +R+I G E +I+RPGYAIEYD+ NP++L +LETK ISGLF Sbjct: 307 LYPNGISTSLPFDIQLALVRSIKGFENAHIVRPGYAIEYDFFNPQDLQYSLETKVISGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A K+ + C R +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGANAALKAQGKEPWCPERDQAYMGVLVDDLITMGTREPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + ++ ++S + Sbjct: 427 RMFTSRAEYRLLLREDNADLRLTEKGRELGLVDDIRWAAFCEKREQIEQETQRMRSTWVQ 486 Query: 485 SKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 + + + ++ K Y + L P+ + +L + +A + V E+++I + Sbjct: 487 ANSAEALQLADKLTAPLNREYSLLDLLKRPELTYADLGHLKGEAVA-NVQVAEQVEITAK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E ++ E IP FDY S+ LSNELK+KL+ +P N+ +AS+I G+ Sbjct: 546 YAGYIDRQQDEIARLRQHENTPIPASFDYDSVEGLSNELKQKLNEARPDNIARASRIPGI 605 Query: 602 TPAALNLLLIYIKK 615 TPAA++LL+IY+KK Sbjct: 606 TPAAISLLVIYLKK 619 >gi|205831546|sp|A4GAI2|MNMG_HERAR RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|193222447|emb|CAL63519.2| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA (Glucose-inhibited division protein A) [Herminiimonas arsenicoxydans] Length = 645 Score = 552 bits (1422), Expect = e-155, Method: Compositional matrix adjust. Identities = 295/627 (47%), Positives = 397/627 (63%), Gaps = 14/627 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++G ST L+TH T+G MSCNP+IGG+GKGHLVRE+DA+ Sbjct: 7 FDVIVVGGGHAGTEAALASARMGQSTLLLTHNIETLGQMSCNPSIGGIGKGHLVREVDAM 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D AGIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 67 GGAMAIATDEAGIQFRILNSSKGPAVRATRAQADRILYKQAIRSRLENQPNLWLFQQGVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG AGR GD P+ SL Sbjct: 127 DLLVEGDRVVGAVTQAGIQFRARAVVLTAGTFLDGKIHIGMNNYSAGRAGDPPAISLSAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTD-KITNRQIECGIT 243 + GRLKTGTP R+DG++I + +Q D IP FS M + +Q+ C IT Sbjct: 187 LKELKLPQGRLKTGTPPRIDGRSIDFSVMTEQPGDLDPIPVFSVMGSVAMHPQQMPCWIT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPEGL T+ Sbjct: 247 HTNEKTHELIRGGLDRSPMYTGMIEGVGPRYCPSIEDKIHRFAGKESHQIFLEPEGLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP ++Q ++++ GLE +I+RPGYAIEYDY +P+ L TLETK I GL Sbjct: 307 EYYPNGISTSLPFDVQLALVQSMRGLEHAHILRPGYAIEYDYFDPRGLKATLETKVIQGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQG++AGIN+A + + D R ++Y+GV++DDL ++GVLEP Sbjct: 367 FFAGQINGTTGYEEAAAQGMLAGINAALQIQERDAWTPRRDEAYLGVLVDDLITQGVLEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF----AKYIQEYNFLRSLLK 479 YRMFTSRAEYR+SLR DNAD RLT +G +LGC+G+ + F +E LRS Sbjct: 427 YRMFTSRAEYRLSLREDNADMRLTDVGRQLGCVGDVQWALFETKREAVARELERLRSTWV 486 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI-CPDARKFSS------LV 532 S + ++ + + K + + L P+ + + L S+ D + V Sbjct: 487 SPRILAEA-EAERVLGKGIEREYALADLLRRPNVTYETLMSLKGMDGQDLGGPGVAEPAV 545 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 E+++I+ YA Y RQ E + E +P +FDY ++ LS E+++KL+ +P L Sbjct: 546 REQVEIQLKYAGYIDRQAREVERHDHYENLKLPAEFDYMAVKGLSIEVRQKLTKQRPETL 605 Query: 593 LQASKIEGMTPAALNLLLIYIKKNTVK 619 QAS+I G+TPAA++L+L+++KK K Sbjct: 606 GQASRISGVTPAAISLMLVHLKKGGFK 632 >gi|226327001|ref|ZP_03802519.1| hypothetical protein PROPEN_00861 [Proteus penneri ATCC 35198] gi|225204838|gb|EEG87192.1| hypothetical protein PROPEN_00861 [Proteus penneri ATCC 35198] Length = 633 Score = 552 bits (1422), Expect = e-155, Method: Compositional matrix adjust. Identities = 290/616 (47%), Positives = 395/616 (64%), Gaps = 7/616 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA+ Sbjct: 7 FDVIVIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAM 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMATAIDHAGIQFRTLNASKGPAVRATRAQADRVLYRQAVRTTLENQPNLMIFQQPVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + ++ V + R +VVLT GTFL G IHIG GR GD PS SL + Sbjct: 127 DLIVENDQVTGAVTRMGLKFRAKSVVLTVGTFLDGKIHIGLENYSGGRAGDPPSVSLSHR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +TI + + Q D + FSF+ + + Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSQLAVQLGDTPMPVFSFLGNVDQHPEQMPCHITY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHEVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNSHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q + ++ G+E IIRPGYAIEYD+ +P++L TLE+K I+GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVNSMKGMENAKIIRPGYAIEYDFFDPRDLKQTLESKFINGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQG++AG+N+AR + + R +YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGMLAGLNAARYAFDQEGWFPRRDQAYIGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL- 483 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R F++ ++ R L+++ + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGMVDDTRWAEFSEKVELVEKERQRLRNIWVH 486 Query: 484 -TSKNLSSTSISFKQD-GKTRTAYEFLSYPDFS---IQNLFSICPDARKFSSLVIERLQI 538 + NLS + K K + L P+ + ++N+ P E+++I Sbjct: 487 PQADNLSEINELLKTPLSKEANGEDLLRRPEMTYNILKNISRFAPGIDDSKPQAAEQVEI 546 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + Y Y RQ E ++ + E +P D DY + LSNE+ KL+ KP ++ QAS+I Sbjct: 547 QVKYEGYISRQQEEIEKKQRNENAALPIDLDYKQVSGLSNEVIAKLNDHKPTSIGQASRI 606 Query: 599 EGMTPAALNLLLIYIK 614 G+TPAA+++LL+++K Sbjct: 607 SGVTPAAISILLVWLK 622 >gi|164428879|ref|XP_956189.2| hypothetical protein NCU11170 [Neurospora crassa OR74A] gi|157072320|gb|EAA26953.2| hypothetical protein NCU11170 [Neurospora crassa OR74A] Length = 717 Score = 552 bits (1422), Expect = e-155, Method: Compositional matrix adjust. Identities = 292/629 (46%), Positives = 393/629 (62%), Gaps = 14/629 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R +DV+VIGGGHAG EA A AA+ GA TAL+T +G SCNP+ GG+GKG ++REID Sbjct: 40 RPFDVVVIGGGHAGSEACAAAARAGARTALVTPSVENLGVCSCNPSFGGIGKGIMIREID 99 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDGL GRV D AG+QFRVLN KKGPAV GPR Q DR LY+ M+ E+ S NL ++ Sbjct: 100 ALDGLAGRVIDKAGVQFRVLNRKKGPAVWGPRAQIDRALYKKHMRAELESYPNLSLVYNS 159 Query: 124 VAGF---------NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRM 174 V+ N ++ I+ + ++ ++ S V++TTGTFL G IHIG P+GRM Sbjct: 160 VSDIVVSENDNPSNGARSKITGVRLESGEVLPTSQVIITTGTFLGGEIHIGMEAYPSGRM 219 Query: 175 GDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT 234 G+ + L S + F GRLKTGTP RLD K+I ++ EKQ+ D+ PFS++ + + Sbjct: 220 GEKATFGLSKSLREAGFKLGRLKTGTPPRLDKKSINFNILEKQYGDDPPNPFSYLNEAVA 279 Query: 235 NR-QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQI 293 + Q+ C T TN TH I+ N+ + +K GPRYCPS+E KI+RF E+ H + Sbjct: 280 VKDQLHCWATYTNHATHEIVRANLDKTIHIRETVK--GPRYCPSLESKIIRFSEKERHLV 337 Query: 294 FLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFP 353 +LEPEG + D++YPNG+S +P E Q +RTIPGLE V + +PGY +EYDY++P+ L Sbjct: 338 WLEPEGFDNDIIYPNGLSMTVPAEAQLALLRTIPGLEDVIMTQPGYGVEYDYVDPRSLKR 397 Query: 354 TLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMID 413 TLETK I GL+LAGQINGTTGYEEAA QG+VAGIN+ R + L+ + SR D YIGVMID Sbjct: 398 TLETKAIRGLWLAGQINGTTGYEEAAGQGIVAGINAGRAATGLEPVTLSRADGYIGVMID 457 Query: 414 DLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNF 473 DL +KGV EPYRMFTSR+E+R++ R DNAD+RLT +G G +G+RR F + Sbjct: 458 DLITKGVSEPYRMFTSRSEFRMTTRSDNADSRLTALGRNWGVVGDRRWSHFQDENGQMAE 517 Query: 474 LRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLF--SICPDARKFSSL 531 LR +L +L+ + + K D + R+A E L + SI+ L+ + P FS Sbjct: 518 LRRILSETILSPQAWQNAGFDVKADSRRRSALEILCFKGASIEKLYESGVVPKLMDFSER 577 Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 V ER IE YA + +E + EE +P D DY + +LS K L +P + Sbjct: 578 VRERTFIEGLYAPQIEKHELERARFEREEDLRLPLDLDYDQIASLSLAEKGVLKATRPES 637 Query: 592 LLQASKIEGMTPAALNLLLIYIKKNTVKL 620 L QA +IEG+TPA LL Y+K+ L Sbjct: 638 LAQARRIEGITPAGCMRLLAYVKRRNGDL 666 >gi|327395840|dbj|BAK13262.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pantoea ananatis AJ13355] Length = 629 Score = 552 bits (1422), Expect = e-155, Method: Compositional matrix adjust. Identities = 291/616 (47%), Positives = 389/616 (63%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIVIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAGAIDRAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R TVVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKTVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLAKR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 RLKTGTP R+D ++I + Q D + FSFM + + +Q+ C +T Sbjct: 187 LRALPLRVDRLKTGTPPRIDARSIDFSVLAPQHGDNPMPVFSFMGNAGQHPQQVPCWMTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNSHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L TLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKLTLESKFIDGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR+S + R +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARQSADKEGWAPRRDQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R RF + ++ R L+ + + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTETGRELGLVDDARWARFNQKLEAIEQERQRLRDIWVH 486 Query: 485 SKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 K+ + +I+ K +A + L P+ + L ++ + E+++I+ Sbjct: 487 PKSEHVEAVNTITSSPLTKEASAEDLLRRPEMTYLKLMALDAFGPALADEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQEEIDRQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPVSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LLIY+KK Sbjct: 607 VTPAAISILLIYLKKQ 622 >gi|300721123|ref|YP_003710391.1| glucose-inhibited division oxidoreductase-like protein [Xenorhabdus nematophila ATCC 19061] gi|297627608|emb|CBJ88127.1| glucose-inhibited division protein, oxidoreductase-like with FAD/NAD(P)-binding domain [Xenorhabdus nematophila ATCC 19061] Length = 618 Score = 552 bits (1422), Expect = e-155, Method: Compositional matrix adjust. Identities = 289/612 (47%), Positives = 395/612 (64%), Gaps = 5/612 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKATDQAGIQFRTLNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQPVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E N ++ +V + + + +VVLT GTFL G IHIG GR GD P+ SL + Sbjct: 127 DLIVENNTVTGVVTRMSLKFKAKSVVLTVGTFLDGKIHIGLENYSGGRAGDPPAISLSHR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D ++I + + E+Q D FSFM + + +QI C IT Sbjct: 187 LRELPLRVARLKTGTPPRIDARSIDFSQLEQQLGDNPTPVFSFMGNAAQHPQQILCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHEVIRSNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q + ++ G+E IIRPGYAIEYD+ +P+ L TLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVHSMKGMENARIIRPGYAIEYDFFDPRGLKQTLESKFIHGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR + + R +YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARYATGEEGWFPRRDQAYIGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL- 483 RMFTSRAEYR+ LR DNAD RLT G +LG + + R K +++ ++ R L+++ + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEQGRRLGLVDDLRWKHYSRKVEMIEQERQRLRNIWVH 486 Query: 484 -TSKNLSSTSISFKQD-GKTRTAYEFLSYPDFSIQNLFSICPDARKFS-SLVIERLQIES 540 S NL + K K + L P+ + + L S+ A + + ++++I+ Sbjct: 487 PHSDNLGDINQMLKTPLSKEANGEDLLRRPEMNYELLTSLSRFAPGLTEAQAADQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E +P D DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQEEIEKQLRNENTALPVDLDYQQVSGLSNEVIAKLNDHKPSSIGQASRISG 606 Query: 601 MTPAALNLLLIY 612 +TPAA+++LL++ Sbjct: 607 ITPAAISILLVW 618 >gi|78486514|ref|YP_392439.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Thiomicrospira crunogena XCL-2] gi|123554882|sp|Q31DK8|MNMG_THICR RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|78364800|gb|ABB42765.1| glucose inhibited division protein A [Thiomicrospira crunogena XCL-2] Length = 633 Score = 552 bits (1422), Expect = e-155, Method: Compositional matrix adjust. Identities = 292/618 (47%), Positives = 390/618 (63%), Gaps = 7/618 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+GGGHAG EAA AA++G T L+T T+G MSCNPAIGG+GKGHLV+EIDA Sbjct: 7 NFDVIVVGGGHAGTEAALAAARMGVRTLLLTDNIDTLGQMSCNPAIGGIGKGHLVKEIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D +GIQFR LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 LGGAMAMAIDESGIQFRTLNASKGPAVRATRAQADRVLYRQAIRMRLENQVNLTIFQQSV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + + VVLT GTFL G IHIG GR GD+PSN L Sbjct: 127 EDLILEGDKVVGAETKMGLKFYAHQVVLTAGTFLAGRIHIGLQNYEGGRAGDAPSNRLAA 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGIT 243 + GRLKTGTP R+D +T+ ++ + Q D+ + FS+M + Q+ C IT Sbjct: 187 KLRELALPVGRLKTGTPPRIDARTVDFEAMQMQPGDDPMPVFSYMGKVSMHPEQMPCYIT 246 Query: 244 RTNLETHRIIMENIKHSAIYS--GDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 TN +TH I +++ S +YS G+I S GPRYCPSIEDK++RF ERN HQ+F+EPEGL Sbjct: 247 YTNEQTHDFIRDSLDQSPMYSDAGEIDSVGPRYCPSIEDKVMRFSERNQHQVFIEPEGLT 306 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 ++ +YPNGIST+LP E Q Q ++++ GLE I+RPGYAIEYDY +P+ L PTLET+ I Sbjct: 307 SNELYPNGISTSLPFETQMQIVQSMKGLENARIMRPGYAIEYDYFDPRGLRPTLETQAIH 366 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GL+ AGQINGTTGYEEAAAQGL+AG+N+AR++ + R ++YIGV++DDL + G Sbjct: 367 GLYFAGQINGTTGYEEAAAQGLLAGMNAARRAQMKEQWYPRRDEAYIGVLVDDLITLGTS 426 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+ LR DNAD RLT IG + G + + R F ++ + LK Sbjct: 427 EPYRMFTSRAEYRLMLREDNADQRLTAIGREFGLVDDARWLSFEGKMETMEAELARLKQT 486 Query: 482 VLTSKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQ 537 + K+ + D K +T ++ L P+ S L ++ + V+E+++ Sbjct: 487 WIHPKHAEAKKAEALMDLPLSKEQTLFDLLKRPNVSYDALATMDMFGNAVTDPTVVEQIE 546 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 IE+ YA Y RQ + +++ E IP D + LSNE+K+KL KP L AS+ Sbjct: 547 IEAKYAGYIARQQEDIDKLRRAENVEIPDALDLDKISGLSNEVKQKLRDHKPATLGMASR 606 Query: 598 IEGMTPAALNLLLIYIKK 615 I G+TPAA++LLLIYIKK Sbjct: 607 ISGITPAAVSLLLIYIKK 624 >gi|170724367|ref|YP_001752055.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas putida W619] gi|205375707|sp|B1JFV2|MNMG_PSEPW RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|169762370|gb|ACA75686.1| glucose inhibited division protein A [Pseudomonas putida W619] Length = 630 Score = 552 bits (1422), Expect = e-155, Method: Compositional matrix adjust. Identities = 291/615 (47%), Positives = 386/615 (62%), Gaps = 7/615 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGHMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREIL-SQENLDVIQGEV 124 G M D +GIQFRVLN +KGPAVR R QADR +Y+ A+ REIL +Q NL + Q Sbjct: 67 GGAMALATDKSGIQFRVLNNRKGPAVRATRAQADRAIYK-AVVREILENQPNLWIFQQSC 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E++ + +V Q +VVLTTGTFL G+IHIG GR GD PS +L + Sbjct: 126 DDLIVEQDQVKGVVTQMGLRFFADSVVLTTGTFLGGLIHIGLQNHSGGRAGDPPSIALAH 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 + GRLKTGTP R+DG+++ + +Q D + SFM + + RQ+ C IT Sbjct: 186 RMRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFMGNAAMHPRQVSCWIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 246 HTNARTHEIIASNLDRSPMYSGVIEGVGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTH 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q + +R+I G+E +I+RPGYAIEYDY +P++L +LETK I GL Sbjct: 306 ELYPNGISTSLPFDVQLELVRSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEA AQGL+AG N+A ++ + C R ++YIGV++DDL + G EP Sbjct: 366 FFAGQINGTTGYEEAGAQGLLAGTNAALRAQGRESWCPRRDEAYIGVLVDDLITLGTQEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT G +LG I ++R F LKS + Sbjct: 426 YRMFTSRAEYRLILREDNADLRLTEKGRELGLIDDQRWAAFCAKRDGIEREEQRLKSTWV 485 Query: 484 TSKNLSSTSISFKQDGKTRTAYE---FLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 ++ K Y L+ P+ L + V E+++I++ Sbjct: 486 RPNTPQGQAVVDKFGTPLSHEYSLLNLLARPEVDYAGLIE-ATGGEQIDPQVAEQVEIKT 544 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 YA Y RQ E ++ E +P D DY+S+ LS E++ KL +P L QAS+I G Sbjct: 545 KYAGYIDRQQDEIARLRASEDTCLPVDIDYTSISGLSKEIQGKLGQTRPQTLGQASRIPG 604 Query: 601 MTPAALNLLLIYIKK 615 +TPAA++LLLI++KK Sbjct: 605 VTPAAISLLLIHLKK 619 >gi|301058100|ref|ZP_07199152.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [delta proteobacterium NaphS2] gi|300447732|gb|EFK11445.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [delta proteobacterium NaphS2] Length = 621 Score = 552 bits (1422), Expect = e-155, Method: Compositional matrix adjust. Identities = 295/621 (47%), Positives = 395/621 (63%), Gaps = 13/621 (2%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 ++ YDVIV+G GHAGCEAA AA++G T L+T + +MSCNPAIGGL KGHLV+EI Sbjct: 5 DKQYDVIVVGAGHAGCEAALAAARMGHPTLLLTINLDHVAAMSCNPAIGGLAKGHLVKEI 64 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G M + AD GIQFR LN +KG AV+G R+Q DR+LYR M++ + S NLD+ Q Sbjct: 65 DALGGEMAKNADQTGIQFRRLNTRKGLAVQGSRSQNDRDLYRKRMKQVVESTPNLDIRQA 124 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 V + I I + + + TVVLT+GTFLRG++HIG AGRMGD S L Sbjct: 125 MVDRLLVKGEKIYGIETRIHEKVLGRTVVLTSGTFLRGLVHIGLDHFEAGRMGDPASVRL 184 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGI 242 F+ GRLKTGT RL+G+TI +D Q DE PFSF T KI Q+ C + Sbjct: 185 SEQLEALGFEVGRLKTGTTPRLNGRTIDYDGLAVQPGDENPKPFSFTTTKIPLPQVPCHM 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II E + S ++SG I+ G RYCPSIEDK+VRF E+ HQIFLEPEGL+T Sbjct: 245 TYTNAKTHDIIREGLDRSPLFSGIIEGTGARYCPSIEDKVVRFSEKERHQIFLEPEGLDT 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 VYPNG+ T+LP +IQ + +R+IPGLEK I+RPGYAIEYDYINP EL P ETK+++G Sbjct: 305 FEVYPNGLPTSLPLDIQIRMVRSIPGLEKAEILRPGYAIEYDYINPLELLPNQETKRVAG 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGT+GYEEAAAQGL+AGIN+ +K + SR ++Y GV+IDDL +KG E Sbjct: 365 LFHAGQINGTSGYEEAAAQGLLAGINAVKKVRGEAPVILSRAEAYAGVLIDDLVTKGTRE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAE+R+ LR DNAD RL +G +LG + + F + + L LK++ Sbjct: 425 PYRMFTSRAEFRLLLREDNADFRLRDLGYELGLVSKDVYADFCRKRDQVWKLLQRLKAVQ 484 Query: 483 LTS--------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIE 534 L K L + I K T + L + ++L P + V Sbjct: 485 LKPRPGILDQLKALKTAPIK-----KATTLEQLLKRSEIYFEHLHLFDPALADENESVSM 539 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 ++ + Y Y RQ + +++K E + IP+ DY ++ LSNE++EKL ++P +L Q Sbjct: 540 EVETQIKYDGYIERQKRQVEKLKHLESKKIPRGIDYETVHGLSNEVREKLGKIRPLSLGQ 599 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 A++I G+TPAA++ + +++K+ Sbjct: 600 AARISGVTPAAISAIQVHLKR 620 >gi|239813064|ref|YP_002941974.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Variovorax paradoxus S110] gi|259495856|sp|C5CW10|MNMG_VARPS RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|239799641|gb|ACS16708.1| glucose inhibited division protein A [Variovorax paradoxus S110] Length = 652 Score = 551 bits (1421), Expect = e-155, Method: Compositional matrix adjust. Identities = 300/630 (47%), Positives = 397/630 (63%), Gaps = 18/630 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA++GA T L++H T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALAAARMGAKTLLLSHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D AGIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 67 GGAMAIATDEAGIQFRILNSSKGPAVRATRAQADRVLYKAAIRHRLENQPNLSLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R TVVLT GTFL G IH+G AGR GD P+ SL Sbjct: 127 DLMVEGDRVVGAVTQVGIAFRARTVVLTAGTFLDGRIHVGLDNYQAGRAGDPPAVSLSAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADER------LIPFSFM-TDKITNRQI 238 + GRLKTGTP RLDG++I + K +Q D + FSFM + +Q+ Sbjct: 187 LKELKLPQGRLKTGTPPRLDGRSIDFSKCTEQAGDGMPGGAGPMPVFSFMGRADMHPQQM 246 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C IT TN TH II S +++G I GPRYCPS+EDKI RF ++ HQIFLEPE Sbjct: 247 PCWITHTNARTHDIIRSGFDRSPMFTGKIDGVGPRYCPSVEDKINRFADKESHQIFLEPE 306 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL T+ YPNGIST+LP +IQ+Q +R++PGLE +I+RPGYAIEYDY +P+EL + ET+ Sbjct: 307 GLTTNEYYPNGISTSLPFDIQYQLVRSMPGLENAHILRPGYAIEYDYFDPRELKSSFETR 366 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I GLF AGQINGTTGYEEAAAQGL AGIN+A + + R ++Y+GV++DDL +K Sbjct: 367 SIKGLFFAGQINGTTGYEEAAAQGLFAGINAALQCRGEEAWLPRRDEAYLGVLVDDLITK 426 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 GV EPYRMFTSRAE+R+ LR DNAD RLT G KLG + + R F++ + L Sbjct: 427 GVTEPYRMFTSRAEFRLQLREDNADMRLTEAGRKLGLVDDARWDAFSRKRDTVSRETERL 486 Query: 479 KSLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS----- 530 KS+ + +NL S + K + L PD + + L S+ D K+S+ Sbjct: 487 KSIWVNPRNLPAAESERVLGKAIEHEYNLADLLRRPDVNYETLMSL--DGGKYSAGSPLS 544 Query: 531 -LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 + IE+++I + Y+ Y RQ E + E +P DFDYS + ALS E+++KL +P Sbjct: 545 EIEIEQIEISAKYSGYIERQHDEVERAAHFENLRLPADFDYSQVKALSFEVRQKLDKHRP 604 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 L AS+I G+TPAA++LL+I+++K K Sbjct: 605 ETLGLASRISGVTPAAISLLMIHLRKGGHK 634 >gi|85712598|ref|ZP_01043645.1| NAD/FAD-utilizing enzyme apparently involved in cell division [Idiomarina baltica OS145] gi|85693589|gb|EAQ31540.1| NAD/FAD-utilizing enzyme apparently involved in cell division [Idiomarina baltica OS145] Length = 631 Score = 551 bits (1421), Expect = e-155, Method: Compositional matrix adjust. Identities = 294/619 (47%), Positives = 399/619 (64%), Gaps = 7/619 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++G+ T L+TH T+G MSCNPAIGG+GKGHLV+EID Sbjct: 7 QTYDVIVVGGGHAGTEAALAAARMGSRTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEID 66 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G+M + AD AGIQFR LN KGPAVR R QADR+LY+ A++ + +Q NL + Q Sbjct: 67 ALGGIMAKAADKAGIQFRTLNSSKGPAVRATRAQADRQLYKQAIRYALETQPNLTLFQQG 126 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 E + ++ +V Q VVLT GTFL G IHIG GR GD P+N+L Sbjct: 127 CDDLIVENDQVTGVVTQMGLKFHARAVVLTVGTFLGGRIHIGLDNYQGGRAGDPPANALS 186 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGI 242 RLKTGTP R+ +I + ++Q D FS++ + + +QI C I Sbjct: 187 QRLRALPLRVDRLKTGTPPRIASHSIDFSVMQEQPGDTPTPVFSYLGSRADHPQQIPCYI 246 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH +I + S +YSG+I+ GPRYCPSIEDKIVRF ++ HQIF+EPEGLNT Sbjct: 247 THTNEQTHDVIRSGLDRSPMYSGEIEGVGPRYCPSIEDKIVRFADKTSHQIFVEPEGLNT 306 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 VYPNGIST+LP ++Q Q +++I G E I RPGYAIEYDY +P++L +LETK I+G Sbjct: 307 FEVYPNGISTSLPFDVQQQLVQSIRGFENAVITRPGYAIEYDYFDPRDLKQSLETKVING 366 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEA AQGL+AG+N+AR + + R +Y+GV+IDDL++ G E Sbjct: 367 LFFAGQINGTTGYEEAGAQGLIAGLNAARLAQDKETWSPRRDQAYMGVLIDDLSTLGTQE 426 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT G +LG + + R + F ++ + L+S Sbjct: 427 PYRMFTSRAEYRLLLREDNADIRLTETGRELGLVDDERWQAFNLKMEAIEQEKQRLRSTW 486 Query: 483 LTSKNLSSTSI-SFKQDGKTR--TAYEFLSYPDFSIQNLFSICPDARKFS-SLVIERLQI 538 + + SI +F + T+ + E L P+ + Q L A S S E+++I Sbjct: 487 VHKDHPEIDSINAFVKSPITKEVSGEELLRRPEVNYQQLVKTPFFAPGLSDSAAAEQVEI 546 Query: 539 ESSYAAYTGRQMIE-AKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 ++ YA Y RQ E AK+ + E RL P FDY+S+ LSNE+ KL+ +P + +A++ Sbjct: 547 QTKYAGYISRQQDEIAKQQRHENTRL-PNQFDYTSIKGLSNEVIAKLNQHQPETVGKAAR 605 Query: 598 IEGMTPAALNLLLIYIKKN 616 I G+TPAA+++LL+++KK Sbjct: 606 ISGITPAAISMLLVHLKKQ 624 >gi|50289417|ref|XP_447140.1| hypothetical protein [Candida glabrata CBS 138] gi|49526449|emb|CAG60073.1| unnamed protein product [Candida glabrata] Length = 663 Score = 551 bits (1421), Expect = e-155, Method: Compositional matrix adjust. Identities = 289/612 (47%), Positives = 394/612 (64%), Gaps = 13/612 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DV+VIGGGHAGCEAA AA+ GA T L+T IG+ SCNP+IGG+GKG L++E+DAL Sbjct: 37 HDVVVIGGGHAGCEAATAAARSGARTVLVTPFLDKIGTCSCNPSIGGVGKGTLIKEVDAL 96 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DG+ GRV D AGI F++LN KG AV GPR Q DR LY MQ + + NL + + +V Sbjct: 97 DGVAGRVTDKAGIHFKMLNQSKGAAVWGPRAQIDRNLYLKEMQSILSNYPNLQLQEAKVK 156 Query: 126 GF-----NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 + +K ++ +V++D++++R VV+TTGTFL IHIG IPAGR+G+ P+ Sbjct: 157 DLLLDKEHGDKTVVHGVVLEDSTIMRTRKVVITTGTFLSAEIHIGMKCIPAGRIGEEPTY 216 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI-TNRQIE 239 L + + F GRLKTGTPARLDGKTI + EKQ+ DE P SF+ + + Q+ Sbjct: 217 GLSKTLKEIGFKLGRLKTGTPARLDGKTIDFSNLEKQYPDEVPHPMSFLNNNVAVETQLL 276 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C T T E H + +N+ S IK GPRYCPSIE KI+RF ++ H+I+LE EG Sbjct: 277 CYGTTTTPELHEYLRQNLDKSLHIRETIK--GPRYCPSIEAKILRFADKQSHKIWLESEG 334 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L+TDV+YPNGIS ++PE++Q + +R +PGLE V II P Y +EYDYI P +L LETK Sbjct: 335 LDTDVIYPNGISNSMPEDVQLKMMRMVPGLENVRIIHPAYGVEYDYIEPTQLNHNLETKL 394 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 ++GL+LAGQINGTTGYEEA AQG++AG N+ S D I SR+D+YIGV+IDDL + G Sbjct: 395 VNGLYLAGQINGTTGYEEACAQGVIAGANAGLSSKNRDQIILSRSDAYIGVLIDDLVTNG 454 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 V+EPYRMFTSR+E+RI+ R +NAD RLTPIG K G + + R RF + ++ LK Sbjct: 455 VVEPYRMFTSRSEFRITTRAENADFRLTPIGRKYGIVDDTRWSRFNNDKHIFEKFKTKLK 514 Query: 480 SLVLT-SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICP----DARKFSSLVIE 534 + L+ SK I K RTA+E Y D +++ L P D + V Sbjct: 515 NFDLSASKWNQKLGIRIADSAKNRTAWEVFRYNDITLRYLAVKIPELDIDINAIPNHVSL 574 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +L +E Y Y +Q + + +E+ L+PK FDYS++P LS+E K L+ ++P + Q Sbjct: 575 KLDVEGKYEPYIVKQNQFVRAFQADEQMLLPKKFDYSNIPTLSSECKMLLNSIQPNTIGQ 634 Query: 595 ASKIEGMTPAAL 606 A +I+G+T AAL Sbjct: 635 ARRIQGVTAAAL 646 >gi|325275323|ref|ZP_08141276.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas sp. TJI-51] gi|324099571|gb|EGB97464.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas sp. TJI-51] Length = 630 Score = 551 bits (1421), Expect = e-155, Method: Compositional matrix adjust. Identities = 292/615 (47%), Positives = 385/615 (62%), Gaps = 7/615 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGHMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREIL-SQENLDVIQGEV 124 G M D +GIQFRVLN +KGPAVR R QADR +Y+ A+ REIL +Q NL + Q Sbjct: 67 GGAMALATDKSGIQFRVLNNRKGPAVRATRAQADRAIYK-AVVREILENQPNLWIFQQSC 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E++ + +V Q +VVLTTGTFL G+IHIG GR GD PS +L + Sbjct: 126 DDLIVEQDQVKGVVTQMGLRFFAESVVLTTGTFLGGLIHIGLQNHSGGRAGDPPSIALAH 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGIT 243 + GRLKTGTP R+DG+++ + +Q D + SFM + ++ RQ+ C IT Sbjct: 186 RMRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFMGNAEMHPRQVSCWIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 246 HTNARTHEIIASNLDRSPMYSGVIEGVGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTH 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q + +R+I G+E +I+RPGYAIEYDY +P++L +LETK I GL Sbjct: 306 ELYPNGISTSLPFDVQLELVRSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EP Sbjct: 366 FFAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT G +LG I ++R F LKS + Sbjct: 426 YRMFTSRAEYRLILREDNADLRLTEKGRELGLIDDQRWAAFCAKRDGIEREEQRLKSTWV 485 Query: 484 TSKNLSSTSISFKQDGKTRTAYE---FLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 +I K Y L+ P+ L V E+++I + Sbjct: 486 RPNTEQGQAIVDKFGTPLSHEYSLLNLLARPEIDYAGLIE-ATGGEAIDPQVAEQVEIRT 544 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 YA Y RQ E ++ E +P D DY+++ LS E++ KL +P L QAS+I G Sbjct: 545 KYAGYIDRQQDEIARLRASEDTRLPVDIDYTTISGLSKEIQGKLGQTRPETLGQASRIPG 604 Query: 601 MTPAALNLLLIYIKK 615 +TPAA++LLLI++KK Sbjct: 605 VTPAAISLLLIHLKK 619 >gi|89074717|ref|ZP_01161175.1| glucose-inhibited division protein A [Photobacterium sp. SKA34] gi|89049481|gb|EAR55042.1| glucose-inhibited division protein A [Photobacterium sp. SKA34] Length = 629 Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust. Identities = 290/616 (47%), Positives = 390/616 (63%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALAAARMGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D GIQFR LN KGPAVR R QADR LY+ A++ + +QENL + Q V Sbjct: 67 GGLMAQAIDKGGIQFRTLNSSKGPAVRATRAQADRVLYKAAVRNVLENQENLMIFQQAVT 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + +V + VVLT GTFL G IHIG GR GD SN+L + Sbjct: 127 DLIVENHRAVGVVTEMGLKFHAKAVVLTVGTFLGGKIHIGMENYSGGRTGDPASNALADR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +++ + E+Q D FSFM + RQI C IT Sbjct: 187 LRELPLRVDRLKTGTPPRIDARSVDFSVLEEQHGDNPTPTFSFMGKSSDHPRQIPCFITY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEGL T+ Sbjct: 247 TNERTHEVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEGLTTNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T E K I GLF Sbjct: 307 LYPNGISTSLPFDVQMQIVRSMQGFENASIMRPGYAIEYDFFDPRDLKQTFENKYIDGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+A + D R +Y+GV+IDDL++ G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLMAGMNAALQVQDKDGWSPRRDQAYMGVLIDDLSTIGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLTP+G + G + + R RF + I+ R LK + + Sbjct: 427 RMFTSRAEYRLLLREDNADLRLTPMGREFGLVDDARWSRFNQKIENMELERQRLKDIWIN 486 Query: 485 SKNLSSTSIS--FKQD-GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VIERLQIES 540 K+ ++ K + + + L P+ + + L SI A E+++I+ Sbjct: 487 PKSDHVDELNKILKAPIAREASGEDLLRRPEVTYEQLTSIETFAPALDDREAREQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E +P D DYS++ LSNE+ KL+ KP ++ AS+I G Sbjct: 547 KYQGYIDRQRDEVEKSLRHETTKLPFDIDYSNVKGLSNEVVAKLNDAKPESIGMASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA++LLL+Y+KK+ Sbjct: 607 ITPAAISLLLVYLKKH 622 >gi|260774973|ref|ZP_05883873.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio coralliilyticus ATCC BAA-450] gi|260609063|gb|EEX35222.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio coralliilyticus ATCC BAA-450] Length = 631 Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust. Identities = 290/623 (46%), Positives = 389/623 (62%), Gaps = 9/623 (1%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + +DVIV+GGGHAG EAA +A+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHEKFDVIVVGGGHAGTEAALASARTGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVREALENAPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E++ +V Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQSVDDLIVEQDRAVGVVTQMGLRFHAKAVVLTVGTFLGGKIHIGMESSSGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D +++ + + E Q D FSFM + + RQI Sbjct: 182 ALADRLRELPFRVDRLKTGTPPRIDARSVDFSQLEAQHGDNPTPVFSFMGQRTQHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CFITHTNDQTHEVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 LNT +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LNTHELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I+GLF AGQINGTTGYEEAAAQGL+AG+N++ S D R +Y+GV+IDDL++ G Sbjct: 362 INGLFFAGQINGTTGYEEAAAQGLMAGLNASLYSQDKDGWSPRRDQAYVGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG I + R RF + I R LK Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEQARELGLIDDLRWARFNEKIDNMTKERQRLK 481 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYE-----FLSYPDFSIQNLFSICPDARKFS-SLVI 533 + K S + Q KT E L P+ + Q L + A + Sbjct: 482 DTWMNPK--SQGIDALNQLLKTPMVREASGEDLLRRPEMTYQQLTELEAFAPALADQQAA 539 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I+ Y Y RQ E ++ E +P D DY+++ LSNE+ KL+ KP ++ Sbjct: 540 EQVEIQVKYEGYIKRQQDEIEKSLRHEHTHLPLDMDYANVKGLSNEVVAKLNESKPESIG 599 Query: 594 QASKIEGMTPAALNLLLIYIKKN 616 AS+I G+TPAA+++LL+++KK Sbjct: 600 IASRISGITPAAISILLVHLKKQ 622 >gi|203284099|ref|YP_002221839.1| glucose inhibited division protein A [Borrelia duttonii Ly] gi|201083542|gb|ACH93133.1| glucose inhibited division protein A [Borrelia duttonii Ly] Length = 626 Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust. Identities = 290/624 (46%), Positives = 403/624 (64%), Gaps = 9/624 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 I +D IVIGGGHAG EA+ A+L T LIT T+G +SCNPAIGGL KG++VRE Sbjct: 5 IGMDFDAIVIGGGHAGIEASLALARLNFKTILITQNLDTVGKLSCNPAIGGLAKGNMVRE 64 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G MG + D + IQFR+LN KGPAV+ PR QAD+ +Y++ + + Q NL++ Q Sbjct: 65 IDALGGEMGCLIDFSMIQFRILNKSKGPAVQAPRAQADKLVYQIKAKETLEMQNNLELFQ 124 Query: 122 GEVAGF--NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 V+ F N KN I +V + + VVLTTGTFLRG I IG+ K GR+ + + Sbjct: 125 DTVSDFLLNPMKNKIEGVVTERGNKFTSRVVVLTTGTFLRGKIFIGEYKAYMGRISEPAA 184 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIE 239 L ++ F+ GRLKTGTPAR+ ++I + KTE QF D +IPFSF KI Q+ Sbjct: 185 FGLEKILLELGFEMGRLKTGTPARVHRRSINFAKTEIQFGDSDIIPFSFSNTKIDKTQLS 244 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +T TN +TH II EN+ S +YSG+I GPRYCPSIEDKIV+F +++ HQIF+EPEG Sbjct: 245 CYVTYTNKKTHEIISENMHLSPLYSGEIVGNGPRYCPSIEDKIVKFKDKDKHQIFIEPEG 304 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 +NT +Y NG+S++LPE++Q + I +I GLE I RPGYA+EYDYINP EL+ +LETK+ Sbjct: 305 INTQEMYLNGLSSSLPEDVQKRLINSIDGLEDAVITRPGYAVEYDYINPIELYASLETKR 364 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 + GLF+AGQ NG++GYEEAAAQGL+AGIN+A K K D + RT SYIGV+IDDL +KG Sbjct: 365 VEGLFVAGQTNGSSGYEEAAAQGLMAGINAALKLQKKDPMILPRTSSYIGVLIDDLVTKG 424 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAE+R++LR D +D RL G ++G + E + R+ ++ ++ LL+ Sbjct: 425 TKEPYRMFTSRAEHRLNLRHDTSDKRLIKWGYEVGLVSEEKYSRYFFKEKQIEEIKELLR 484 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 L K SS + + + Y + P ++++L +I P S +++E+++++ Sbjct: 485 HRRLKEKEASSFEL---KRHINKDFYHIVKDPYINLKDLVNIDPKLNA-SKVILEQVELD 540 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ +++ E +P DF+Y + LS E +EK ++P NL QAS++ Sbjct: 541 IKYEGYINRQKDLIRKMNNLELIKLPLDFNY-EIDGLSREAREKFVKIQPANLAQASRVS 599 Query: 600 GMTPAALNLLLIYIK--KNTVKLN 621 G+ + +LLIY KN V LN Sbjct: 600 GVRNTDIQVLLIYFSNPKNKVVLN 623 >gi|254184036|ref|ZP_04890627.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei 1655] gi|184214568|gb|EDU11611.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei 1655] Length = 657 Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust. Identities = 290/625 (46%), Positives = 392/625 (62%), Gaps = 15/625 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q V Sbjct: 67 GGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRVLYKQAIRRRLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IH+G GR GD + SL + Sbjct: 127 DLMVEGDRVVGAVTQVGVRFRARAVVLTAGTFLDGKIHVGLNHYTGGRAGDPAAVSLSSR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQIECGIT 243 + + GRLKTGTP R+DG+TI + K ++Q D IP FSF+ + +Q+ C +T Sbjct: 187 LKELNLPQGRLKTGTPPRIDGRTIDFSKLDEQPGDLDPIPVFSFLGRAEQHPQQLPCWVT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T+ Sbjct: 247 HTNERTHDIIRSGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP ++Q + ++ GLE+ +I+RPGYAIEYDY +P+ L +LETK I GL Sbjct: 307 EFYPNGISTSLPFDVQLALVHSMRGLEQAHILRPGYAIEYDYFDPRALKSSLETKAIGGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ R + + D C R +Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGINAGRYAQEKDAWCPRRDQAYLGVLVDDLVTRGVSEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F + + L++ + Sbjct: 427 YRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDDVRWDAFNRKRDAVSRETERLRTTWV 486 Query: 484 TSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----CPDARKFS------S 530 T K L +T++ K + E L P S + + C + + + Sbjct: 487 TPKTLPADEATALLGKPIDHEYSLAELLRRPGVSYDGVCGLRGGECGPSEPLAEDELLLA 546 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 + E+++I Y Y RQ E + E +P DY+ + LS E+ +KL+ +P Sbjct: 547 QIKEQIEIGIKYQGYIERQAGEIERNGANENTRLPDGIDYTEVRGLSFEVSQKLNQFRPE 606 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 + QAS+I GMTPAA++LL++++KK Sbjct: 607 TIGQASRISGMTPAAISLLMVHLKK 631 >gi|296533443|ref|ZP_06896026.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Roseomonas cervicalis ATCC 49957] gi|296266223|gb|EFH12265.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Roseomonas cervicalis ATCC 49957] Length = 623 Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust. Identities = 307/619 (49%), Positives = 413/619 (66%), Gaps = 6/619 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M S+DV+VIGGGHAG EAAA AA+ GA T L+TH+ T+G MSCNPAIGG+GKGHLVR Sbjct: 1 MRENSFDVVVIGGGHAGTEAAAAAARCGARTLLLTHRIETLGEMSCNPAIGGVGKGHLVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DALDGL+GR AD AGI F++LN KGPAVRGPR QADR LYR A+Q + +Q L + Sbjct: 61 EVDALDGLIGRAADLAGIHFKLLNRSKGPAVRGPRAQADRALYRRAIQSLLAAQPGL-TL 119 Query: 121 QGEVAGFNTEKNI---ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 + E AG E++ I +++ + + I C ++TTGTFLRG IHIG+ + PAGR+GD+ Sbjct: 120 RAEAAG-GLERDASGRIVAVLTESGTRIACGAAIITTGTFLRGEIHIGETRQPAGRVGDA 178 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ 237 PS L + RLKTGTP RLDG+TI W E Q DE P S+MT++I N Q Sbjct: 179 PSIGLALALEALGLPMRRLKTGTPPRLDGRTIDWAGLEMQPGDEAPEPLSWMTERIANPQ 238 Query: 238 IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 ++CGIT T E H +I N+ + I+SG I+ GPRYCPSIEDKI RF R HQIFLEP Sbjct: 239 VQCGITATTPEGHALIRANLHRAPIHSGQIQGAGPRYCPSIEDKITRFAGRERHQIFLEP 298 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EGL+ +YPNGIST+LPE++Q FI TIPGLE+ I+R GYAIEYD+++P+ L PTLE Sbjct: 299 EGLDDPTIYPNGISTSLPEDVQRGFIATIPGLERAEILRLGYAIEYDHVDPRALRPTLEL 358 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCI-CFSRTDSYIGVMIDDLT 416 + + GLFLAGQINGTTGYEEAAAQGL+AG+N+A + +RT++Y+GVM+DDL Sbjct: 359 RAVPGLFLAGQINGTTGYEEAAAQGLLAGLNAAALAGGEAEGRVLARTEAYLGVMVDDLV 418 Query: 417 SKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRS 476 +GV EPYRM T+R+E+R++LR DNA RLT G+ G +G R RF + + Sbjct: 419 LQGVTEPYRMLTARSEHRLALRADNAGLRLTEKGIAWGVVGPERAARFRAFAAGVADALA 478 Query: 477 LLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 ++ T L S I QDG+ R+ E L+ PD + + P + V +L Sbjct: 479 RARAEGGTPAALQSAGIPINQDGRWRSLLEVLALPDVPGEAVAQAFPWLNDLPAGVRAQL 538 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 + E+ YA Y RQ E + ++ +E++ IP+ D+ ++P LSNE+K++L +P L A Sbjct: 539 EAEALYAPYLERQAAELRLLERDERQAIPRGLDFGAIPGLSNEMKQRLETARPETLGGAG 598 Query: 597 KIEGMTPAALNLLLIYIKK 615 ++ G+TPAAL L +++++ Sbjct: 599 RVPGITPAALAALAVHLRR 617 >gi|53802710|ref|YP_112542.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Methylococcus capsulatus str. Bath] gi|81170556|sp|Q60CS5|MNMG_METCA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|53756471|gb|AAU90762.1| glucose inhibited division protein A [Methylococcus capsulatus str. Bath] Length = 625 Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust. Identities = 284/616 (46%), Positives = 391/616 (63%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA+ GA T L+T T+G MSCNPAIGG+GKGHLV+EIDA+ Sbjct: 7 FDVIVVGGGHAGTEAALAAARTGARTLLLTQNVETLGQMSCNPAIGGIGKGHLVKEIDAM 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM R AD AGIQFR+LN KGPAVR R QADR LYR A++ + +QENL + Q V Sbjct: 67 GGLMARAADRAGIQFRILNASKGPAVRATRAQADRSLYRKAVREGLSAQENLSLFQQTVV 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + +V Q R VVLT GTFL G IHIG GR GD P+ L Sbjct: 127 DLIVEGRRAAGVVTQMGLKFRSRCVVLTVGTFLAGRIHIGLENYDGGRAGDPPATDLARR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQIECGITR 244 F RLKTGTP R+D +++ + + +Q D+ FSF+ T + Q+ C ITR Sbjct: 187 LRDLGFKVARLKTGTPPRIDRRSVDFSRMAEQPGDDPTPVFSFLGTREEHPPQVSCYITR 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH +I + S +++G I+ GPRYCPSIEDK+VRF ER+ HQIF+EPEGL++ Sbjct: 247 TNERTHELIRAGLDRSPMFTGVIEGIGPRYCPSIEDKVVRFAERDSHQIFVEPEGLDSLE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q +R+I G E I RPGYAIEYD+ +P++L +LET+ + LF Sbjct: 307 IYPNGISTSLPFDVQLAVVRSIQGFEDARITRPGYAIEYDFFDPRDLRHSLETRHMENLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+ARK+ L+ R ++Y+GV++DDL ++G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARKARDLEPWWPGRDEAYLGVLVDDLITRGTSEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL- 483 RMFTSRAEYR+ LR DNAD RLT G LG + + R F + L + L + + Sbjct: 427 RMFTSRAEYRLVLREDNADLRLTETGRALGLVDDARWSAFEAKREAIETLGARLAARRIR 486 Query: 484 --TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA-RKFSSLVIERLQIES 540 +S+ S +++ + + E L PD ++++ PD V E+++I + Sbjct: 487 PDSSQAESWNALTEIPLQREASLLELLRRPDVGLEHIAGHAPDLFEGMDRAVREQVEIAA 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E + ++ E +P DY + LS+E++EKL ++P + QA++I G Sbjct: 547 KYTGYIERQQAEIERVRRYEAWQLPDSMDYGKVIGLSSEVREKLGRVRPATVGQAARIPG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA++LLL+++++ Sbjct: 607 ITPAAISLLLVHLRRT 622 >gi|89898871|ref|YP_521342.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Rhodoferax ferrireducens T118] gi|122477997|sp|Q21QL5|MNMG_RHOFD RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|89343608|gb|ABD67811.1| glucose inhibited division protein A [Rhodoferax ferrireducens T118] Length = 679 Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust. Identities = 299/655 (45%), Positives = 411/655 (62%), Gaps = 41/655 (6%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DVIV+GGGHAG EAA AA++G T L++H T+G MSCNP+IGG+GKGHLV+E+D Sbjct: 5 QHFDVIVVGGGHAGTEAALAAARMGCKTLLLSHNIETLGQMSCNPSIGGIGKGHLVKEVD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D GIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q Sbjct: 65 ALGGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRLLYKAAIRRRLENQPNLWLFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + + V Q R TVVLT GTFL G IH+G AGR GD P+ L Sbjct: 125 VDDLMVEGDRVVGAVTQAGIKFRAKTVVLTAGTFLDGKIHVGLNNYAAGRAGDPPAVRLS 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFAD------ERLIP-FSFMTDKITNR 236 + GRLKTGTP RLDG++I + K +Q D ++P FSFM ++ Sbjct: 185 ARLKELKLPQGRLKTGTPPRLDGRSIDFSKCGEQPGDGMPGGMSPVMPVFSFM-GRVEQH 243 Query: 237 --QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 Q+ C T TN TH II S +++G I+ GPRYCPS+EDKI RF +++ HQIF Sbjct: 244 PPQMSCWTTHTNERTHEIIRSGFDRSPMFTGKIEGVGPRYCPSVEDKINRFADKDSHQIF 303 Query: 295 LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT 354 LEPEGL T+ YPNGIST+LP +IQ+ +R++ GLE +I+RPGYAIEYDY +P++L + Sbjct: 304 LEPEGLTTNEYYPNGISTSLPFDIQYALVRSMAGLENAHILRPGYAIEYDYFDPQQLKSS 363 Query: 355 LETKKISGLFLAGQINGTTGYEEAAAQGLVAGINS-----ARKSNKLDCICFSRTDSYIG 409 ET+ I GLF AGQINGTTGYEEAAAQGL AG+N+ A+ S + + R ++Y+G Sbjct: 364 FETRAIGGLFFAGQINGTTGYEEAAAQGLFAGVNAALQAGAQTSWQQETWVPGRDEAYLG 423 Query: 410 VMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQ 469 V++DDL +KGV EPYRMFTSRAE+R+ LR DNAD RLT G +LG + + R + F++ + Sbjct: 424 VLVDDLITKGVTEPYRMFTSRAEFRLQLREDNADMRLTETGRRLGLVDDARWEAFSRKRE 483 Query: 470 EYNFLRSLLKSLVLTSKNLSSTSISFKQDGKT----RTAYEFLSYPDFSIQNLFSI---- 521 + L+SL ++ KNL++T S + GK+ + + L PD + NL S+ Sbjct: 484 AVSRETERLRSLWVSPKNLTATE-SERVLGKSIEHEYSLADLLRRPDVNYANLMSLEGGK 542 Query: 522 -------CPDARK----------FSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLI 564 P +R+ F+++VIE+++I + YA Y RQ+ E E + Sbjct: 543 YASAELNIPVSRETPAVPLPEAVFAAVVIEQVEIVAKYAGYIDRQIEEVGRAAHYENLKL 602 Query: 565 PKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 P + DY + ALS E ++KLS +P L QAS++ G+TPAA++LLL+++KK+ K Sbjct: 603 PLELDYLQVSALSFEARQKLSKHRPETLGQASRLSGITPAAISLLLVHLKKSNFK 657 >gi|225850343|ref|YP_002730577.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Persephonella marina EX-H1] gi|259495850|sp|C0QPI1|MNMG_PERMH RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|225644818|gb|ACO03004.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Persephonella marina EX-H1] Length = 623 Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust. Identities = 291/621 (46%), Positives = 390/621 (62%), Gaps = 19/621 (3%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDV+VIGGGHAG EAA +AKLG TALIT +G M CNPAIGG+ KG +VREIDA Sbjct: 6 EYDVVVIGGGHAGIEAALASAKLGVKTALITLDKEKVGLMPCNPAIGGIAKGIVVREIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 G MG+ DA GIQF+ LN +KGPAVR PR QAD+E YR M ++L+ ENL VI+GE Sbjct: 66 FGGEMGKAIDATGIQFKTLNTRKGPAVRSPRAQADKEEYRKYMVNKVLNTENLTVIEGEA 125 Query: 125 AGFNTEKNI--ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 +++ + + + IR +VV+TTGTFL GVIHIG +IPAGRM + PS L Sbjct: 126 TDIYLKESSYEVEGVEVDRRLKIRAKSVVVTTGTFLDGVIHIGDKRIPAGRMDEKPSTKL 185 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--------KIT 234 + + K F R KTGTPARLD +TI + E+ DE FSF TD K Sbjct: 186 PDFYRKLGFPLQRFKTGTPARLDKRTIDFSGLEEAPGDEPAPKFSFWTDPEHSYWFRKNQ 245 Query: 235 NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 QI C IT T ETHRII EN+ +A+Y G IK GPRYCPSIEDKIV+F + H ++ Sbjct: 246 KEQIPCYITYTTPETHRIIRENLHRTALYGGAIKGIGPRYCPSIEDKIVKFENKERHTVW 305 Query: 295 LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT 354 LEPE N +YPNG+ST+LPEE+Q + R+IPGLE V +++P YAIEYD + P EL+PT Sbjct: 306 LEPETKNGISIYPNGLSTSLPEEVQWEMYRSIPGLENVVLLKPAYAIEYDIVPPTELYPT 365 Query: 355 LETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDD 414 LETK++ GL+ AG NGTTGYEEAA QGLVAGIN+A ++ + R ++YIGVMIDD Sbjct: 366 LETKRVKGLYHAGNFNGTTGYEEAAGQGLVAGINAALRALGKEPFYIRRDEAYIGVMIDD 425 Query: 415 LTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFL 474 LT+KGV+EPYR+FTSR+EYR+ LR DN RL LG + + K + +E Sbjct: 426 LTTKGVIEPYRLFTSRSEYRLHLRQDNPVLRLYRKAYNLGMLSYEQFKAVEEIEKEIGRW 485 Query: 475 RSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIE 534 + ++ I K + ++ +AY+ L PD + L + + S V E Sbjct: 486 LDIYRN--------ERRKIVSKGETRSVSAYDLLKRPDIDVNKLKEYGFETPE-SDYVAE 536 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 + I Y+ Y R+ +++++ E IP+D DYS + L+ E+ +KL+ KP L Sbjct: 537 EIDINVKYSGYFERERKMNEKMRYLENIKIPEDIDYSQIAGLTKEVVQKLTAAKPLTLGH 596 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 A+++EG+TPAA+ ++I+++K Sbjct: 597 AARLEGITPAAITAIMIHLQK 617 >gi|220936471|ref|YP_002515370.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Thioalkalivibrio sp. HL-EbGR7] gi|254811521|sp|B8GRC9|MNMG_THISH RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|219997781|gb|ACL74383.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Thioalkalivibrio sp. HL-EbGR7] Length = 639 Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust. Identities = 288/622 (46%), Positives = 393/622 (63%), Gaps = 15/622 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+GGGHAG EAA +A+ GA T L+TH TIG MSCNPAIGG+GKGHLV+EIDA Sbjct: 6 SYDVIVVGGGHAGTEAALASARAGARTLLLTHNIETIGQMSCNPAIGGIGKGHLVKEIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLM R AD GI FR LN +KGPAVR R QADR Y+ A++ + + +L + Q V Sbjct: 66 LGGLMARAADRGGIHFRTLNSRKGPAVRATRAQADRVRYKAAVRSVVENTPHLFLFQQAV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ ++ Q R VVLT GTFL G IH+G+++ GR GD PS +L Sbjct: 126 DDLIVEGERVAGVITQTGLRFRSPAVVLTVGTFLGGRIHVGEVQHAGGRAGDPPSIALAA 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGIT 243 + GRLKTGTP R+DG++I + + +Q D FSF+ + + Q+ C I Sbjct: 186 RLRELAPRVGRLKTGTPPRIDGRSIDYAQLTEQPGDAPRPVFSFIGARDEHPPQVSCWIA 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 RT TH II + S +YSG I+ GPRYCPSIEDK+VRF +++ HQ+F+EPEGL+T Sbjct: 246 RTTEHTHAIIRGALHRSPMYSGAIEGVGPRYCPSIEDKVVRFADKDSHQVFIEPEGLDTH 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNGIST+LP ++Q + +R+IPG E+ +I RPGYAIEYDY +P++L P+LET+ ++GL Sbjct: 306 EVYPNGISTSLPFDVQFELVRSIPGFEQAHITRPGYAIEYDYFDPRDLKPSLETRCLAGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGLVAG+N+AR L C R ++YIGV+IDDL ++G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLVAGLNAARSVRDLAPWCPRRDEAYIGVLIDDLITRGTAEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLTP+G +G + + R F + L + L Sbjct: 426 YRMFTSRAEYRLMLREDNADLRLTPLGRDMGLVDDARWAAFCTKREAVERETQRLAATRL 485 Query: 484 TSKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSI------CPDARKFSSLVIE 534 + + + G + + + L P+ L + D R V E Sbjct: 486 DPERVDREAAERVIGGAFSREQNLLDLLRRPEVDYAALMGLEGAGPGVEDPR-----VAE 540 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I + YA Y RQ E + E +P+ DY+++ LS E+++KL+ +P L Q Sbjct: 541 QVEIGAKYAGYIQRQQDEVARQQRHENLALPEGLDYAAITGLSMEVRQKLAAHRPHTLGQ 600 Query: 595 ASKIEGMTPAALNLLLIYIKKN 616 A++I G+TPAA++LLL+++K+ Sbjct: 601 AARIPGVTPAAVSLLLVHVKRQ 622 >gi|302390790|ref|YP_003826611.1| glucose inhibited division protein A [Thermosediminibacter oceani DSM 16646] gi|302201418|gb|ADL08988.1| glucose inhibited division protein A [Thermosediminibacter oceani DSM 16646] Length = 627 Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust. Identities = 286/613 (46%), Positives = 387/613 (63%), Gaps = 5/613 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV V+G GHAGCEAA +A+LG T + +I M CNP+IGG KGHLVREIDAL Sbjct: 8 YDVAVVGAGHAGCEAALASARLGMKTVVFAINLDSIALMPCNPSIGGPAKGHLVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ D IQ R+LN KKGPAVR R QAD++ Y+ +M+ + Q+NLD++QGEV Sbjct: 68 GGEMGKNIDKTLIQMRLLNTKKGPAVRALRAQADKKAYQFSMKYTLEKQQNLDIVQGEVV 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + +V + + V+LTTG +LRG I IG + G G P+N L Sbjct: 128 RVLVEGGRVKGVVTKTGGVYYARAVILTTGVYLRGRIIIGDVSYSGGPNGLFPANELSKC 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 F+ GR KTGTP R+ +I + K +Q DE +IPFS+ T+ I QI C +T T Sbjct: 188 LEALGFELGRFKTGTPPRVHRDSIDFSKMIEQPGDEVIIPFSYETESIKRPQISCWLTYT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N +TH II +N+ + +Y+GDIK GPRYCPSIE KIV F E+ HQ+F+EPEG NT + Sbjct: 248 NEKTHEIIRKNLYRAPLYTGDIKGVGPRYCPSIEVKIVNFPEKESHQVFVEPEGENTCEM 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+ST+LPE++Q + +RTI GLE V ++RPGYAIEYDY+ P +L TLETK+I GL++ Sbjct: 308 YLQGVSTSLPEDVQVELLRTIRGLENVKMMRPGYAIEYDYVIPTQLKLTLETKEIEGLYM 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGT+GYEEAAAQGL+AGIN+A K + + + R+D+YIGV+IDDL +KG EPYR Sbjct: 368 AGQINGTSGYEEAAAQGLIAGINAALKLKERESLVLGRSDAYIGVLIDDLVTKGTDEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAK----YIQEYNFLRSLLKSL 481 M TSRAEYR+ LR DNAD RLT IG ++G I E R +RF K +E LRS K Sbjct: 428 MLTSRAEYRLLLRHDNADMRLTEIGYRVGLISEERYERFLKKKKMIEEEIERLRS-TKIT 486 Query: 482 VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 N + I T + L P+ L ++ P+ + VIE+++I ++ Sbjct: 487 PTAEVNKALEEIGTAPLATPATLEDILKRPEIDYAALKALDPERPELPPEVIEQVEIMTA 546 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y RQ+ + + + E + IP D DY + L E +EKL ++P ++ QAS+I G+ Sbjct: 547 YDGYIKRQLKQVENFRKMENKRIPDDIDYDKIHGLRTEAREKLKKIRPASIGQASRISGV 606 Query: 602 TPAALNLLLIYIK 614 PA + +LLIY++ Sbjct: 607 NPADITILLIYLE 619 >gi|254186501|ref|ZP_04893018.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei Pasteur 52237] gi|157934186|gb|EDO89856.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei Pasteur 52237] Length = 657 Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust. Identities = 290/625 (46%), Positives = 392/625 (62%), Gaps = 15/625 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q V Sbjct: 67 GGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRVLYKQAIRRRLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IH+G GR GD + SL + Sbjct: 127 DLMVEGDRVVGAVTQVGVRFRARAVVLTAGTFLDGKIHVGLNHYTGGRAGDPAAVSLSSR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQIECGIT 243 + + GRLKTGTP R+DG+TI + K ++Q D IP FSF+ + +Q+ C +T Sbjct: 187 LKELNLPQGRLKTGTPPRIDGRTIDFSKLDEQPGDLDPIPVFSFLGRAEQHPQQLPCWVT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T+ Sbjct: 247 HTNERTHDIIRSGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP ++Q + ++ GLE+ +I+RPGYAIEYDY +P+ L +LETK I GL Sbjct: 307 EFYPNGISTSLPFDVQLALVHSMRGLEQAHILRPGYAIEYDYFDPRALKSSLETKAIGGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ R + + D C R +Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGINAGRYAQEKDAWCPRRDQAYLGVLVDDLVTRGVSEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F + + L++ + Sbjct: 427 YRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDDVRWDAFNRKRDAVSRETERLRTTWV 486 Query: 484 TSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----CPDARKFS------S 530 T K L +T++ K + E L P S + + C + + + Sbjct: 487 TPKTLPADEATALLGKPIDHEYSLAELLRRPGVSYDGVCGLRGGECGPSEPLAEDELLLA 546 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 + E+++I Y Y RQ E + E +P DY+ + LS E+ +KL+ +P Sbjct: 547 QIKEQIEIGIKYQGYIERQAGEIERNGANENTRLPDGIDYTEVRGLSFEVSQKLNQFRPE 606 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 + QAS+I GMTPAA++LL++++KK Sbjct: 607 TIGQASRISGMTPAAISLLMVHLKK 631 >gi|332983462|ref|YP_004464903.1| glucose inhibited division protein A [Mahella australiensis 50-1 BON] gi|332701140|gb|AEE98081.1| glucose inhibited division protein A [Mahella australiensis 50-1 BON] Length = 624 Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust. Identities = 281/618 (45%), Positives = 390/618 (63%), Gaps = 8/618 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAGCEAA +A++G T ++ +I M+CNP+IGG KGHLVREIDA Sbjct: 7 TYDVIVVGAGHAGCEAALASARMGCKTLVVAINLDSIAMMACNPSIGGTSKGHLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG D IQ R+LN KGPAV R Q D++ Y+ M++ + Q+NLDV Q EV Sbjct: 67 LGGQMGITTDKTAIQVRMLNTSKGPAVYSLRAQIDKKAYQAVMKQTLEQQDNLDVKQAEV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E+ + +V ++ R V+LTTG +L G + IG++ +G G P+ L Sbjct: 127 VRLLVEEGAVRGVVTHTGAIYRAKAVILTTGVYLNGRVIIGEVSYSSGPNGMFPATHLSQ 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + R KTGTPAR+ G++I + K Q DE IPFSFM DK+ +Q+ C +T Sbjct: 187 DLLLLGIKLQRFKTGTPARVAGRSIDFSKMALQLGDEPPIPFSFMDDKLDAKQVPCHLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S ++SGDIK GPRYCPSIEDK+VRF ++ HQIF+EPEGLNTD Sbjct: 247 TNERTHEIIRRNLHRSPLFSGDIKGVGPRYCPSIEDKVVRFADKPSHQIFIEPEGLNTDE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+S++LPE++Q + +R+I GLE V ++RP YAIEYD I+P +L +LE K I GLF Sbjct: 307 MYVQGMSSSLPEDVQIEMLRSIAGLEHVEVMRPAYAIEYDCIDPTQLKLSLEIKHIRGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQING++GYEEAAAQG++AGIN+AR + R+ +YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGSSGYEEAAAQGIMAGINAARMVQGKPPVILDRSQAYIGVLIDDLVTKGTAEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL- 483 RM TSRAEYR+ LR DNAD RLTPIG ++G G R +R+ + LKS ++ Sbjct: 427 RMMTSRAEYRLLLRQDNADMRLTPIGYEIGLAGAERYERYLLKKDQVESELERLKSTIIA 486 Query: 484 --TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV---IERLQI 538 T N +S + T Y+ L P+ S L I D + S L+ IE+++I Sbjct: 487 PDTEVNELLGKLSSQPIKTGVTLYDLLKRPEISYAALAPI--DKDRPSGLLQQAIEQVEI 544 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 Y Y RQM++ + K E +P D DY+++ L E ++KL ++P ++ QAS+I Sbjct: 545 NVKYEGYIARQMMQIERFKKMEDHKLPDDIDYNAIKGLRIEARQKLDRIRPQSVGQASRI 604 Query: 599 EGMTPAALNLLLIYIKKN 616 G++PA +++LLIY+K++ Sbjct: 605 SGVSPADISVLLIYLKQH 622 >gi|53724003|ref|YP_104449.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia mallei ATCC 23344] gi|121598310|ref|YP_994646.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia mallei SAVP1] gi|124385197|ref|YP_001027579.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia mallei NCTC 10229] gi|126449480|ref|YP_001082523.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia mallei NCTC 10247] gi|126451633|ref|YP_001068275.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei 1106a] gi|167001264|ref|ZP_02267063.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia mallei PRL-20] gi|167721836|ref|ZP_02405072.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei DM98] gi|217423848|ref|ZP_03455348.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei 576] gi|238561559|ref|ZP_00441828.2| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia mallei GB8 horse 4] gi|242316407|ref|ZP_04815423.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei 1106b] gi|254174970|ref|ZP_04881631.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia mallei ATCC 10399] gi|254194591|ref|ZP_04901022.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei S13] gi|254201525|ref|ZP_04907889.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia mallei FMH] gi|254206863|ref|ZP_04913214.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia mallei JHU] gi|254357415|ref|ZP_04973689.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia mallei 2002721280] gi|81170532|sp|Q62FS8|MNMG_BURMA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|166222914|sp|A3MQI7|MNMG_BURM7 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|166222915|sp|A2S6L0|MNMG_BURM9 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|166222916|sp|A1V8U3|MNMG_BURMS RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|166222917|sp|A3P104|MNMG_BURP0 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|52427426|gb|AAU48019.1| glucose-inhibited division protein A [Burkholderia mallei ATCC 23344] gi|121227120|gb|ABM49638.1| glucose-inhibited division protein A [Burkholderia mallei SAVP1] gi|124293217|gb|ABN02486.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia mallei NCTC 10229] gi|126225275|gb|ABN88815.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei 1106a] gi|126242350|gb|ABO05443.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia mallei NCTC 10247] gi|147747419|gb|EDK54495.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia mallei FMH] gi|147752405|gb|EDK59471.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia mallei JHU] gi|148026479|gb|EDK84564.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia mallei 2002721280] gi|160696015|gb|EDP85985.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia mallei ATCC 10399] gi|169651341|gb|EDS84034.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei S13] gi|217392911|gb|EEC32933.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei 576] gi|238524328|gb|EEP87761.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia mallei GB8 horse 4] gi|242139646|gb|EES26048.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei 1106b] gi|243062887|gb|EES45073.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia mallei PRL-20] Length = 657 Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust. Identities = 290/625 (46%), Positives = 392/625 (62%), Gaps = 15/625 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q V Sbjct: 67 GGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRVLYKQAIRRRLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IH+G GR GD + SL + Sbjct: 127 DLMVEGDRVVGAVTQVGVRFRARAVVLTAGTFLDGKIHVGLNHYTGGRAGDPAAVSLSSR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQIECGIT 243 + + GRLKTGTP R+DG+TI + K ++Q D IP FSF+ + +Q+ C +T Sbjct: 187 LKELNLPQGRLKTGTPPRIDGRTIDFSKLDEQPGDLDPIPVFSFLGRAEQHPQQLPCWVT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T+ Sbjct: 247 HTNERTHDIIRSGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP ++Q + ++ GLE+ +I+RPGYAIEYDY +P+ L +LETK I GL Sbjct: 307 EFYPNGISTSLPFDVQLALVHSMRGLEQAHILRPGYAIEYDYFDPRALKSSLETKAIGGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ R + + D C R +Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGINAGRYAQEKDAWCPRRDQAYLGVLVDDLVTRGVSEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F + + L++ + Sbjct: 427 YRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDDVRWDAFNRKRDAVSRETERLRTTWV 486 Query: 484 TSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----CPDARKFS------S 530 T K L +T++ K + E L P S + + C + + + Sbjct: 487 TPKTLPADEATALLGKPIDHEYSLAELLRRPGVSYDGVCGLRGGECGPSEPLAEDELLLA 546 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 + E+++I Y Y RQ E + E +P DY+ + LS E+ +KL+ +P Sbjct: 547 QIKEQIEIGIKYQGYIERQAGEIERNGANENTRLPDGIDYTEVRGLSFEVSQKLNQFRPE 606 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 + QAS+I GMTPAA++LL++++KK Sbjct: 607 TIGQASRISGMTPAAISLLMVHLKK 631 >gi|332143484|ref|YP_004429222.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Alteromonas macleodii str. 'Deep ecotype'] gi|238693237|sp|B4RS92|MNMG_ALTMD RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|327553506|gb|AEB00225.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Alteromonas macleodii str. 'Deep ecotype'] Length = 633 Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust. Identities = 289/619 (46%), Positives = 392/619 (63%), Gaps = 9/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+GGGHAG EAA AA++GA+T L+TH TIG MSCNPAIGG+GKGHLV+EIDA Sbjct: 6 AFDVIVVGGGHAGTEAALAAARMGANTLLLTHNIETIGQMSCNPAIGGIGKGHLVKEIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D GIQFR LN KGPAVR R QADR LY+ A++ + +QENL + Q V Sbjct: 66 LGGAMALAIDKGGIQFRTLNSSKGPAVRATRAQADRTLYKNAIRDIVENQENLTLFQQSV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + +V Q + +VVLT GTFL G IHIG GR GD PS +L + Sbjct: 126 DDLIVENDRVCGVVTQMGLKFKAKSVVLTVGTFLGGTIHIGLENYRGGRAGDPPSIALAD 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 F RLKTGTPARLD +++ + + Q D FSFM D+ + QI C IT Sbjct: 186 RLRALPFRVDRLKTGTPARLDARSLDFSVMQPQPGDSPTPVFSFMGDRAMHPTQIPCYIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH II + S +++G I+ GPRYCPSIEDKI RF ++ HQIF+EPEGLN+ Sbjct: 246 HTNEKTHDIIRGGLDRSPMFTGVIEGIGPRYCPSIEDKITRFADKTSHQIFVEPEGLNSI 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNGIST+LP ++Q +R+I G E +I+RPGYAIEYD+ +P++L TLETK I GL Sbjct: 306 EVYPNGISTSLPFDVQMNLVRSIKGFENAHIVRPGYAIEYDFFDPRDLKQTLETKFIQGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEA AQGLVAG N+A + + D R +Y+GV+IDDL + G EP Sbjct: 366 FFAGQINGTTGYEEAGAQGLVAGANAALQVQQKDPFILRRDQAYMGVLIDDLATMGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD+RLT +G ++G + + R ++ ++ L+ + Sbjct: 426 YRMFTSRAEYRLLLREDNADSRLTAMGREIGLVDDARWAKYNDKMEAVETELQRLRGQWI 485 Query: 484 TSKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLF---SICPDARKFSSLVIERLQ 537 + ++ ++ + + E + P+ + L S+ P + E+++ Sbjct: 486 HPDHAATPQLNTMLKNPVSREHSLEELIRRPEMTYSQLMKIESVGPGID--DPIAAEQVE 543 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ YA Y RQM E + + E L+P D D+S + LSNE+ KL+ +P + +AS+ Sbjct: 544 IQIKYAGYIARQMDEIAKTQRHENTLLPIDMDFSKISGLSNEVVAKLTEARPETIGKASR 603 Query: 598 IEGMTPAALNLLLIYIKKN 616 I G+TPAA++LLL+Y+KK+ Sbjct: 604 ISGITPAAISLLLVYLKKH 622 >gi|294341939|emb|CAZ90368.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA (Glucose-inhibited division protein A) [Thiomonas sp. 3As] Length = 644 Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust. Identities = 300/629 (47%), Positives = 394/629 (62%), Gaps = 13/629 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R++DV+VIGGGHAG EAA AA++G +T L+TH T+G MSCNP+IGG+GKGHLV+E+D Sbjct: 5 RNFDVVVIGGGHAGTEAALAAARMGCATLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D AGIQFR+LN KGPAVR R QADR+LY+ A++ + Q NL + Q Sbjct: 65 ALGGAMAEATDEAGIQFRILNASKGPAVRATRAQADRQLYKRAIRGRLEDQPNLWLFQQA 124 Query: 124 VAGFNTEKN----IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 E ++++V Q R TVVLT GTFL G IHIG + AGR GD PS Sbjct: 125 ADDLLVESTGQAERVTAVVTQTGIRFRTRTVVLTAGTFLDGKIHIGLDQYAAGRAGDPPS 184 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQ 237 L GRLKTGTPAR+DG+TI + K +Q D +P FSF+ + Q Sbjct: 185 LRLSARLKALALPQGRLKTGTPARIDGRTIDFSKLIEQPGDLNPMPVFSFLGSADQHPAQ 244 Query: 238 IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 + C IT T +TH II + S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEP Sbjct: 245 VACWITHTTEQTHDIIRAGLDRSPMFTGVIEGVGPRYCPSIEDKIHRFADKSSHQIFLEP 304 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EGL T+ YPNGIST+LP ++Q + +IPGLE +++RPGYAIEYDY NP L +LET Sbjct: 305 EGLQTNEFYPNGISTSLPFDVQIAMVHSIPGLENAHLLRPGYAIEYDYFNPMALKTSLET 364 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 K I GLF AGQINGTTGYEEAAAQGL+AGIN+A + D C R +Y+GV++DDL + Sbjct: 365 KSIDGLFFAGQINGTTGYEEAAAQGLLAGINAALQVQGRDPWCPRRDQAYLGVLVDDLVT 424 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL 477 KGV EPYRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F + Sbjct: 425 KGVSEPYRMFTSRAEYRLSLREDNADLRLTEIGRELGVVNDARWDAFCRKRDAIEREIQR 484 Query: 478 LKSLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNL--FSICPDARKFSSLV 532 L++ +T ++L + ++ K + + L P+ L F A +F Sbjct: 485 LRTTWVTPQSLPPEQAEALLGKSIEREYNLADLLRRPELRYDTLAAFPHPAFAPEFPLGE 544 Query: 533 IERLQIE--SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 ER Q+E YA Y RQ E + +E +P D DY + LS E+++KL+ +P Sbjct: 545 TEREQVEIHLKYAGYIERQQDEVERAAQQESLRLPADLDYREVSGLSIEVQQKLNQARPE 604 Query: 591 NLLQASKIEGMTPAALNLLLIYIKKNTVK 619 L AS++ GMTPAA++LLLI+++K +K Sbjct: 605 TLGLASRLSGMTPAAVSLLLIHLRKGVLK 633 >gi|134281604|ref|ZP_01768312.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei 305] gi|167904864|ref|ZP_02492069.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei NCTC 13177] gi|167913142|ref|ZP_02500233.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei 112] gi|134247271|gb|EBA47357.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei 305] Length = 657 Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust. Identities = 290/625 (46%), Positives = 392/625 (62%), Gaps = 15/625 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q V Sbjct: 67 GGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRVLYKQAIRRRLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IH+G GR GD + SL + Sbjct: 127 DLMVEGDRVVGAVTQVGVRFRARAVVLTAGTFLDGKIHVGLNHYTGGRAGDPAAVSLSSR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQIECGIT 243 + + GRLKTGTP R+DG+TI + K ++Q D IP FSF+ + +Q+ C +T Sbjct: 187 LKELNLPQGRLKTGTPPRIDGRTIDFSKLDEQPGDLDPIPVFSFLGRAEQHPQQLPCWVT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T+ Sbjct: 247 HTNERTHDIIRSGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP ++Q + ++ GLE+ +I+RPGYAIEYDY +P+ L +LETK I GL Sbjct: 307 EFYPNGISTSLPFDVQLALVHSMRGLEQAHILRPGYAIEYDYFDPRALKSSLETKAIGGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ R + + D C R +Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGINAGRYAQEKDAWCPRRDQAYLGVLVDDLVTRGVSEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F + + L++ + Sbjct: 427 YRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDDVRWDAFNRKRDAVSRETERLRTTWV 486 Query: 484 TSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----CPDARKFS------S 530 T K L +T++ K + E L P S + + C + + + Sbjct: 487 TPKTLPADEATALLGKPIDHEYSLAELLRRPGISYDGVCGLRGGECGPSEPLAEDELLLA 546 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 + E+++I Y Y RQ E + E +P DY+ + LS E+ +KL+ +P Sbjct: 547 QIKEQIEIGIKYQGYIERQAGEIERNGANENTRLPDGIDYTEVRGLSFEVSQKLNQFRPE 606 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 + QAS+I GMTPAA++LL++++KK Sbjct: 607 TIGQASRISGMTPAAISLLMVHLKK 631 >gi|254509071|ref|ZP_05121174.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio parahaemolyticus 16] gi|219548004|gb|EED25026.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio parahaemolyticus 16] Length = 631 Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust. Identities = 285/627 (45%), Positives = 393/627 (62%), Gaps = 13/627 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA +A+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHENFDVIVVGGGHAGTEAALASARTGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D AGIQFR LN KGPAVR R QADR LY+ ++ + + +NL + Sbjct: 62 EVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVREALENADNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + +V Q R VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQSVDDLIVENDTAVGVVTQMGLKFRAKAVVLTVGTFLGGKIHIGMESSSGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D +++ + + E Q D FSFM + + RQI Sbjct: 182 ALADRLRELPFRVDRLKTGTPPRIDARSVDFSELEVQHGDNPTPVFSFMGQRTQHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CFITHTNESTHEVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTHELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 ISGLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 ISGLFFAGQINGTTGYEEAAAQGLMAGLNASLHSQGKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG I + R RF + I R LK Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLIDDARWARFNEKIDNMEKERQRLK 481 Query: 480 SLVLTSKN--------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL 531 + K+ + + +S + G+ ++Y + + F+ + ++ + Sbjct: 482 ETWMNPKSEGIDALNAILKSPMSREASGEDLLRRPEMTYSQLTALDRFAPALEDQQAA-- 539 Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 E+++I+ Y Y RQ E ++ E +P D DYS + LSNE+ KL+ KP + Sbjct: 540 --EQVEIQVKYEGYIQRQQDEIEKSLRHENTKLPVDMDYSKVSGLSNEVVAKLTEAKPES 597 Query: 592 LLQASKIEGMTPAALNLLLIYIKKNTV 618 + AS+I G+TPAA+++LL+++KK + Sbjct: 598 IGIASRISGITPAAISILLVHLKKQGI 624 >gi|126440375|ref|YP_001060975.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei 668] gi|167826386|ref|ZP_02457857.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei 9] gi|167847905|ref|ZP_02473413.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei B7210] gi|226193173|ref|ZP_03788783.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei Pakistan 9] gi|254298691|ref|ZP_04966142.1| glucose-inhibited division protein A [Burkholderia pseudomallei 406e] gi|166222918|sp|A3NF54|MNMG_BURP6 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|126219868|gb|ABN83374.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei 668] gi|157808631|gb|EDO85801.1| glucose-inhibited division protein A [Burkholderia pseudomallei 406e] gi|225934773|gb|EEH30750.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei Pakistan 9] Length = 657 Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust. Identities = 290/625 (46%), Positives = 392/625 (62%), Gaps = 15/625 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q V Sbjct: 67 GGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRVLYKQAIRRRLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IH+G GR GD + SL + Sbjct: 127 DLMVEGDRVVGAVTQVGVRFRARAVVLTAGTFLDGKIHVGLNHYTGGRAGDPAAVSLSSR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQIECGIT 243 + + GRLKTGTP R+DG+TI + K ++Q D IP FSF+ + +Q+ C +T Sbjct: 187 LKELNLPQGRLKTGTPPRIDGRTIDFSKLDEQPGDLDPIPVFSFLGRAEQHPQQLPCWVT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T+ Sbjct: 247 HTNERTHDIIRSGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP ++Q + ++ GLE+ +I+RPGYAIEYDY +P+ L +LETK I GL Sbjct: 307 EFYPNGISTSLPFDVQLALVHSMRGLEQAHILRPGYAIEYDYFDPRALKSSLETKAIGGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ R + + D C R +Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGINAGRYAQEKDAWCPRRDQAYLGVLVDDLVTRGVSEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F + + L++ + Sbjct: 427 YRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDDVRWDAFNRKRDAVSRETERLRTTWV 486 Query: 484 TSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----CPDARKFS------S 530 T K L +T++ K + E L P S + + C + + + Sbjct: 487 TPKTLPVDEATALLGKPIDHEYSLAELLRRPGVSYDGVCGLRGGECGPSEPLAEDELLLA 546 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 + E+++I Y Y RQ E + E +P DY+ + LS E+ +KL+ +P Sbjct: 547 QIKEQIEIGIKYQGYIERQAGEIERNGANENTRLPDGIDYTEVRGLSFEVSQKLNQFRPE 606 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 + QAS+I GMTPAA++LL++++KK Sbjct: 607 TIGQASRISGMTPAAISLLMVHLKK 631 >gi|315128180|ref|YP_004070183.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudoalteromonas sp. SM9913] gi|315016693|gb|ADT70031.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudoalteromonas sp. SM9913] Length = 629 Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust. Identities = 289/621 (46%), Positives = 400/621 (64%), Gaps = 5/621 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA AA++G +T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 IFHENFDVIVVGGGHAGTEAALAAARMGMNTLLLTHNMDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G M + D GIQFR LN KGPAVR R QADR LY+ A+Q + +QENL + Sbjct: 62 EIDALGGAMAQAIDKGGIQFRTLNSSKGPAVRATRAQADRALYKAAIQNTLQNQENLKIF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q E N ++ +V Q +VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQSCDDLIVENNRVTGVVTQMGLRFSAPSVVLTVGTFLGGQIHIGLENFKGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D +T+ + K ++Q D FSFM + + +QI Sbjct: 182 ALADRLRELPFRVDRLKTGTPPRIDARTVDFSKMQEQPGDAPTPVFSFMGKQSDHPQQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I +N+ S +YSG I+ GPRYCPSIEDKIVRF +++ HQIF+EPEG Sbjct: 242 CYITYTNEKTHDVIRKNLHRSPMYSGVIEGIGPRYCPSIEDKIVRFADKDKHQIFVEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L + +YPNGIST+LP ++Q + +++I G E +I RPGYAIEYD+ +P++L +LETK Sbjct: 302 LTSYELYPNGISTSLPFDVQLEIVQSITGFENAHICRPGYAIEYDFFDPRDLKQSLETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEA AQGL+AG+N+A + + R ++Y+GV+IDDL + G Sbjct: 362 IDGLFFAGQINGTTGYEEAGAQGLIAGMNAALQVQGKESWTPRRDEAYVGVLIDDLATLG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT G +LG + + R + F + ++ + +K Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADIRLTEKGRELGLVNDERWQAFNEKMEVIAKEKQRIK 481 Query: 480 SLVLTSKNLSSTSIS-FKQDGKTRTAY--EFLSYPDFSIQNLFSICPDARKFSS-LVIER 535 + + ++ + R A E L P+ +L +I +F++ +E+ Sbjct: 482 DTWIHKDHAVVDQVNELLKTPLVREASLEELLRRPEVRYNDLMAIEGLGSEFTNKAALEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I + YA Y RQ E + E+ ++PK+FDY ++ LSNE+ KL +P + QA Sbjct: 542 VEIHTKYAGYIARQQDEINKQLRHEETILPKEFDYKTVSGLSNEVVAKLIDARPDTIGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKKN 616 S+I G+TPAA++LLL+Y+KK Sbjct: 602 SRISGITPAAISLLLVYLKKQ 622 >gi|323492998|ref|ZP_08098134.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio brasiliensis LMG 20546] gi|323312734|gb|EGA65862.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio brasiliensis LMG 20546] Length = 631 Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust. Identities = 291/623 (46%), Positives = 390/623 (62%), Gaps = 9/623 (1%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + +DVIV+GGGHAG EAA +A+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHEKFDVIVVGGGHAGTEAALASARTGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRHALENTPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E++ +V Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQSVDDLIVEQDQAVGVVTQMGLRFYAKAVVLTVGTFLGGKIHIGMESSSGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D +++ + + E Q D FSFM ++ + RQI Sbjct: 182 ALADRLREMPFRVDRLKTGTPPRIDARSVDFSELEVQHGDNPAPVFSFMGNRSQHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CFITHTNEQTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L+T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LDTHELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I+GLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 INGLFFAGQINGTTGYEEAAAQGLMAGLNASLYSQDKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG I + R RF + I R LK Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTAQARELGLIDDARWARFNQKIDNMETERQRLK 481 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYE-----FLSYPDFSIQNLFSICPDARKF-SSLVI 533 + + K S + Q KT A E L P+ S L + A Sbjct: 482 EIWMNPK--SDGVEALNQLLKTPMAREASGEDLLRRPEISYSQLTELEAFAPALEDQQAA 539 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I+ Y Y RQ E ++ E +P + DYS++ LSNE+ KLS KP L Sbjct: 540 EQVEIQVKYEGYIKRQQEEIEKSLRHEHTKLPAELDYSAVKGLSNEVVAKLSEAKPETLG 599 Query: 594 QASKIEGMTPAALNLLLIYIKKN 616 AS+I G+TPAA+++LL+++KK+ Sbjct: 600 IASRISGITPAAISILLVHLKKH 622 >gi|312794883|ref|YP_004027805.1| glucose inhibited division protein A [Burkholderia rhizoxinica HKI 454] gi|312166658|emb|CBW73661.1| Glucose inhibited division protein A [Burkholderia rhizoxinica HKI 454] Length = 669 Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust. Identities = 294/625 (47%), Positives = 394/625 (63%), Gaps = 15/625 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D AGIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q V Sbjct: 67 GGAMAVATDEAGIQFRILNSSKGPAVRATRAQADRILYKAAIRRRLENQSNLWLFQQSVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + ++ V Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 127 DLIIEGDRVAGAVTQVGIRFRSRAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQIECGIT 243 + GRLKTGTP R+DG++I + K E+Q D IP FSF+ + RQ+ C IT Sbjct: 187 LRELKLPQGRLKTGTPPRIDGRSIDFLKLEEQPGDLDPIPVFSFLGCADQHPRQVSCWIT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPEGL T+ Sbjct: 247 HTNARTHEIIRSGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFATKESHQIFLEPEGLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNG+ST+LP ++Q IR++ GLE +I+RPGYAIEYDY +P+ L +LETK I+GL Sbjct: 307 EFYPNGVSTSLPFDVQLNLIRSMKGLEHAHILRPGYAIEYDYFDPRALKASLETKAIAGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ R + D R +Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGINAGRFVQQRDAWVPRRDQAYLGVLVDDLVTRGVSEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLT IG +LG + + R + F++ + + + LKS+ + Sbjct: 427 YRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDDVRWEAFSRKREAVSRETARLKSIWV 486 Query: 484 TSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI------CPDARKFSSLVIE 534 K L + ++ K + + L P S + L ++ PD + E Sbjct: 487 NPKTLPAEDAVALLGKPIDHEYSLADLLRRPGVSYEGLMALQASRYAPPDVLVDDPGLFE 546 Query: 535 ----RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 +++I Y Y RQ E + + E +P D DY + LS E+ +KL+ +P Sbjct: 547 QVKYQIEIGIKYQGYIERQAGEIERNEAHENTRLPADLDYVQVRGLSFEVCQKLNHHRPE 606 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 + QAS+I G+TPAA++LL++++KK Sbjct: 607 TIGQASRISGVTPAAISLLMVHLKK 631 >gi|194367607|ref|YP_002030217.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Stenotrophomonas maltophilia R551-3] gi|194350411|gb|ACF53534.1| glucose inhibited division protein A [Stenotrophomonas maltophilia R551-3] Length = 629 Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust. Identities = 283/615 (46%), Positives = 385/615 (62%), Gaps = 5/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVI IGGGHAG EAA AA+ G T L+TH T+G+MSCNPAIGG+GKGHLV+EIDAL Sbjct: 8 YDVIAIGGGHAGTEAALAAARTGVRTLLLTHNIETVGAMSCNPAIGGIGKGHLVKEIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M AD AGIQ+R LN KGPAVR R QADR LYR+A++ + + NL V Q V Sbjct: 68 GGAMAHAADRAGIQWRTLNASKGPAVRATRCQADRNLYRMAIRAIVEGEANLTVFQAAVD 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + ++ Q VVLT GTFL G IH+G + AGRMGD P+ +L Sbjct: 128 DLVIEGDAVRGVITQTGLRFDAEAVVLTAGTFLAGKIHVGPTQYAAGRMGDPPATTLAAR 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + F RLKTGTP R+DG+++ + ++Q D SF+ + +Q+ C IT Sbjct: 188 LRERPFQVDRLKTGTPPRIDGRSLDYSVMDEQPGDSPRPVMSFLGSVDEHPQQVSCWITH 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T +TH+II + + S +YSG I+ GPRYCPSIEDK+VRF E+ HQIF+EPEGL Sbjct: 248 TTEQTHQIIRDALHRSPLYSGQIEGIGPRYCPSIEDKVVRFAEKASHQIFVEPEGLGIVE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q + +R+I G E +I RPGYAIEYD+ +P+ L +LETK ++GLF Sbjct: 308 IYPNGISTSLPFDVQLEMVRSIRGFENAHITRPGYAIEYDFFDPRGLKASLETKLVNGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR+ LD C R ++Y+GV++DDL + G EPY Sbjct: 368 FAGQINGTTGYEEAAAQGLLAGLNAARQVRGLDGWCPRRDEAYLGVLVDDLITHGTNEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLTP+G +G + +RR F + R+ L +L T Sbjct: 428 RMFTSRAEYRLQLREDNADQRLTPVGRGMGLVDDRRWSAFETKQAAVDAERARLGALWAT 487 Query: 485 SKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLFSICPDARKFS-SLVIERLQIES 540 N ++ + + + P+ L + + V E+++I Sbjct: 488 PANALGREVNETLGVAVSRETNVLDLIKRPELDYAALMQVPSLGPAVADGKVAEQVEIGV 547 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 YA Y RQ E + + E I + FDY+++ LS E +KL ++P + QA +I G Sbjct: 548 KYAGYLDRQREEIERQQRHEATPIAEAFDYATVRGLSAEALQKLERVRPQTIGQAQRIPG 607 Query: 601 MTPAALNLLLIYIKK 615 MTPAA++LLL+++++ Sbjct: 608 MTPAAISLLLVHLER 622 >gi|85060383|ref|YP_456085.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Sodalis glossinidius str. 'morsitans'] gi|123518619|sp|Q2NQ95|MNMG_SODGM RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|84780903|dbj|BAE75680.1| glucose inhibited division protein A [Sodalis glossinidius str. 'morsitans'] Length = 629 Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust. Identities = 288/628 (45%), Positives = 395/628 (62%), Gaps = 23/628 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA+ Sbjct: 7 FDVIIIGGGHAGTEAAMASARMGCQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAM 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D GIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAQAIDKGGIQFRILNASKGPAVRATRAQADRVLYRQAVRGALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS SL Sbjct: 127 DLIMEGDRVVGAVTQIGLKFRARAVVLTVGTFLDGKIHIGMDHYSGGRAGDPPSVSLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + F RLKTGTP R+D +I + + Q D+ L FSF+ + RQI C IT Sbjct: 187 LRELPFRVNRLKTGTPPRIDAHSIDFSRLATQHGDDPLPVFSFLGSADQHPRQIPCYITY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I +N+ S +Y+G I+ GPRYCPSIEDK++RF +R+ HQIFLEPEGL ++ Sbjct: 247 TNDKTHEVIRQNLDRSPMYAGIIEGVGPRYCPSIEDKVMRFADRDAHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q + + ++ GLE I+RPGYAIEYD+ +P++L TLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMKIVHSMQGLENARIVRPGYAIEYDFFDPRDLKLTLESKLIEGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQG++AG+N+AR + D R +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGMLAGLNAARLAMGKDGWSPRRDQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R +RF ++ R L+ + + Sbjct: 427 RMFTSRAEYRLLLREDNADLRLTETGRQLGMVDDVRWERFCAKQEQIERERQRLRDIWVH 486 Query: 485 SKN--------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVI--- 533 + L S++ + +G+ E L P+ L + +F ++ Sbjct: 487 PGSDGVEQLNPLLKASLTREANGE-----ELLRRPEMDYARLTHL----ERFGPALVDSQ 537 Query: 534 --ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 E+++I+ Y Y RQ E E L+P D+S++ LSNE+ KL+ KP + Sbjct: 538 AAEQVEIQIKYQGYIARQQEEIARQMRNEHTLLPAAMDFSTVSGLSNEVIAKLNDHKPNS 597 Query: 592 LLQASKIEGMTPAALNLLLIYIKKNTVK 619 + QAS+I G+TPAA+++LL+++KK ++ Sbjct: 598 IGQASRISGVTPAAISILLVWLKKQGLR 625 >gi|289209757|ref|YP_003461823.1| glucose inhibited division protein A [Thioalkalivibrio sp. K90mix] gi|288945388|gb|ADC73087.1| glucose inhibited division protein A [Thioalkalivibrio sp. K90mix] Length = 624 Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust. Identities = 287/618 (46%), Positives = 390/618 (63%), Gaps = 11/618 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA+ GA T L+TH TIG MSCNPAIGG+GKGHLV+EIDAL Sbjct: 5 FDVIVIGGGHAGTEAALAAARAGARTLLLTHNIETIGQMSCNPAIGGIGKGHLVKEIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+M R ADAAGI FR+LN +KGPAVR R Q+DR+LYR A+++ + ++ NL + Q VA Sbjct: 65 GGVMARAADAAGIHFRILNRRKGPAVRATRAQSDRQLYRQAIRQFVEAEPNLQIFQQPVA 124 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + ++ +V + VVLT GTFL G +H G + P GR GD PS L Sbjct: 125 DITMEGDRVTGVVTEAGLAFTARAVVLTVGTFLNGQMHTGLTQQPGGRAGDPPSVRLAAR 184 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 F GRLKTGTP R+DG+++ + + E Q D+ FSF + Q C I R Sbjct: 185 LRDMAFAVGRLKTGTPPRIDGRSVDFSRLEVQPGDDPRPVFSFTGSPGDHPEQRPCHIAR 244 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ TH +I N+ + +YSG I S GPRYCPSIEDK+VRF ++ HQ+F+EPEGL T Sbjct: 245 TSERTHDLIRANLDQAPMYSGQIDSTGPRYCPSIEDKVVRFADKTSHQVFVEPEGLTTHE 304 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP IQ +++I G E I RPGYAIEYDY +P+ L P+L T++++ LF Sbjct: 305 LYPNGISTSLPYAIQVPLVQSIEGFEHARITRPGYAIEYDYFDPRGLRPSLATREVANLF 364 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGLVAG+N+AR + + R+++YIGV+IDDL ++G EPY Sbjct: 365 FAGQINGTTGYEEAAAQGLVAGLNAARLTRDAEPWIPQRSEAYIGVLIDDLVTRGTQEPY 424 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLTP+G + G + + R+A++ + + S + L T Sbjct: 425 RMFTSRAEYRLLLREDNADLRLTPVGREHGLVDD---ARWARFERRAAAIESEMSRLAQT 481 Query: 485 SKNLSSTS------ISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARK-FSSLVIERLQ 537 + S + K T + L P+ L P+ + V E+ + Sbjct: 482 RPDRDQRSRPALVELLGKAPEPDATLLDLLRRPEADYDALMQALPELDAGCTPDVREQAE 541 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I++ YA Y RQ E ++ +P + DY+ + LSNE+++KL+ +P L QA + Sbjct: 542 IQARYAGYIERQQAEVARQAKADQTALPDNLDYARVHGLSNEIRQKLAEFRPHTLGQAQR 601 Query: 598 IEGMTPAALNLLLIYIKK 615 I G+TPAAL+ L +++K+ Sbjct: 602 IPGVTPAALSALAVHLKQ 619 >gi|76809663|ref|YP_331606.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei 1710b] gi|167818023|ref|ZP_02449703.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei 91] gi|167896462|ref|ZP_02483864.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei 7894] gi|167921079|ref|ZP_02508170.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei BCC215] gi|254259137|ref|ZP_04950191.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei 1710a] gi|123600829|sp|Q3JXU7|MNMG_BURP1 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|76579116|gb|ABA48591.1| glucose-inhibited division protein A [Burkholderia pseudomallei 1710b] gi|254217826|gb|EET07210.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei 1710a] Length = 657 Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust. Identities = 289/625 (46%), Positives = 392/625 (62%), Gaps = 15/625 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q V Sbjct: 67 GGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRVLYKQAIRRRLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IH+G GR GD + SL + Sbjct: 127 DLMVEGDRVVGAVTQVGVRFRARAVVLTAGTFLDGKIHVGLNHYTGGRAGDPAAVSLSSR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQIECGIT 243 + + GRLKTGTP R+DG+TI + K ++Q D IP FSF+ + +Q+ C +T Sbjct: 187 LKELNLPQGRLKTGTPPRIDGRTIDFSKLDEQPGDLDPIPVFSFLGRAEQHPQQLPCWVT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T+ Sbjct: 247 HTNERTHDIIRSGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP ++Q + ++ GLE+ +I+RPGYAIEYDY +P+ L +LETK I GL Sbjct: 307 EFYPNGISTSLPFDVQLALVHSMRGLEQAHILRPGYAIEYDYFDPRALKSSLETKAIGGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ R + + D C R +Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGINAGRYAQEKDAWCPRRDQAYLGVLVDDLVTRGVSEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLT +G +LG + + R F + + L++ + Sbjct: 427 YRMFTSRAEYRLSLREDNADMRLTEVGRELGVVDDVRWDAFNRKRDAVSRETERLRTTWV 486 Query: 484 TSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----CPDARKFS------S 530 T K L +T++ K + E L P S + + C + + + Sbjct: 487 TPKTLPADEATALLGKPIDHEYSLAELLRRPGVSYDGVCGLRGGECGPSEPLAEDELLLA 546 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 + E+++I Y Y RQ E + E +P DY+ + LS E+ +KL+ +P Sbjct: 547 QIKEQIEIGIKYQGYIERQAGEIERNGANENTRLPDGIDYTEVRGLSFEVSQKLNQFRPE 606 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 + QAS+I GMTPAA++LL++++KK Sbjct: 607 TIGQASRISGMTPAAISLLMVHLKK 631 >gi|261250648|ref|ZP_05943223.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio orientalis CIP 102891] gi|260939217|gb|EEX95204.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio orientalis CIP 102891] Length = 631 Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust. Identities = 285/625 (45%), Positives = 394/625 (63%), Gaps = 13/625 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + +DVIV+GGGHAG EAA +A+ G +T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHEKFDVIVVGGGHAGTEAALASARTGQNTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D +GIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAQAIDHSGIQFRTLNASKGPAVRATRAQADRALYKAYVRHALENAPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + ++ +V Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQSVDDLIVENDQVTGVVTQMGLRFHAKAVVLTVGTFLGGKIHIGMESSSGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D +++ + E Q D FSFM + + RQI Sbjct: 182 ALADRLRELPFRVDRLKTGTPPRIDARSVDFSDLEVQHGDTPAPVFSFMGKREHHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CFITHTNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L+T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LDTHELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 ISGLF AGQINGTTGYEEAAAQGL+AG+N++ S D R +Y+GV+IDDL++ G Sbjct: 362 ISGLFFAGQINGTTGYEEAAAQGLMAGLNASLHSQGKDGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG I + R RF + I R LK Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTAQARELGLIDDARWARFNEKIDNMESERQRLK 481 Query: 480 SLVLTSKN--------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL 531 + + K+ L T ++ + G+ ++Y + + F+ + ++ + Sbjct: 482 DIWMNPKSAGVDALNGLLKTPMAREASGEDLLRRPEITYAQLTELDAFAPALEDQQAA-- 539 Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 E+++I+ Y Y RQ E ++ E +P D DYS + LSNE+ KL KP + Sbjct: 540 --EQVEIQVKYEGYIKRQQDEIEKSLRHENTKLPLDLDYSQVKGLSNEVVAKLGEAKPES 597 Query: 592 LLQASKIEGMTPAALNLLLIYIKKN 616 + AS+I G+TPAA+++LL+++KK+ Sbjct: 598 IGIASRISGITPAAISILLVHLKKH 622 >gi|90581140|ref|ZP_01236939.1| glucose-inhibited division protein A [Vibrio angustum S14] gi|90437661|gb|EAS62853.1| glucose-inhibited division protein A [Vibrio angustum S14] Length = 629 Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust. Identities = 290/616 (47%), Positives = 390/616 (63%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALAAARMGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D GIQFR LN KGPAVR R QADR LY+ A++ + +QENL V Q V Sbjct: 67 GGLMAQAIDKGGIQFRTLNSSKGPAVRATRAQADRALYKAAVRNVLENQENLMVFQQAVT 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + +V + VVLT GTFL G IHIG GR GD SN+L + Sbjct: 127 DLIVENHRAVGVVTEMGLKFHGKAVVLTVGTFLGGKIHIGMENYSGGRTGDPASNALADR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +++ + E+Q D FSFM + RQI C IT Sbjct: 187 LRELPLRVDRLKTGTPPRIDARSVDFSVLEEQHGDNPTPTFSFMGKSSDHPRQIPCFITY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEGL T+ Sbjct: 247 TNERTHEVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEGLTTNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G E I+RPGYAIEYD+ +P++L T E K I GLF Sbjct: 307 LYPNGISTSLPFDVQMQIVRSMQGFENATIMRPGYAIEYDFFDPRDLKQTFENKYIDGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+A + + R +Y+GV+IDDL++ G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLMAGMNAALQVQDKEGWSPRRDQAYMGVLIDDLSTIGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLTP+G + G + + R RF + I+ R LK + + Sbjct: 427 RMFTSRAEYRLLLREDNADLRLTPMGREFGLVDDARWSRFNQKIENMELERQRLKDIWIN 486 Query: 485 SKNLSSTSIS--FKQD-GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VIERLQIES 540 K+ ++ K + + + L P+ + + L SI A + E+++I+ Sbjct: 487 PKSDHVDELNKILKAPIAREASGEDLLRRPEVTYEQLTSIETFAPALDDIEAREQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E +P D DYS++ LSNE+ KL+ KP ++ AS+I G Sbjct: 547 KYQGYIDRQRDEVEKSLRHETTKLPFDIDYSNVKGLSNEVVVKLNDAKPESIGMASRISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA++LLL+Y+KK+ Sbjct: 607 ITPAAISLLLVYLKKH 622 >gi|104784445|ref|YP_610943.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas entomophila L48] gi|122401169|sp|Q1I2H6|MNMG_PSEE4 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|95113432|emb|CAK18160.1| glucose-inhibited division protein A [Pseudomonas entomophila L48] Length = 630 Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust. Identities = 291/617 (47%), Positives = 389/617 (63%), Gaps = 11/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGHMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREIL-SQENLDVIQGEV 124 G M D +GIQFRVLN +KGPAVR R QADR +Y+ A+ REIL +Q NL + Q Sbjct: 67 GGAMALATDMSGIQFRVLNNRKGPAVRATRAQADRAIYK-AVVREILENQPNLWIFQQSC 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E++ + +V Q +VVLT+GTFL G+IHIG GR GD P+N+L Sbjct: 126 DDLIVEQDQVKGVVTQMGLRFFADSVVLTSGTFLGGLIHIGLQNYSGGRAGDPPANALAQ 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 + GRLKTGTP R+DG+++ + +Q D + SFM + + RQ+ C IT Sbjct: 186 RMRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFMGNAAMHPRQVSCWIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 246 HTNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTH 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q + +R+I G+E +I+RPGYAIEYDY +P++L +LETK I GL Sbjct: 306 ELYPNGISTSLPFDVQLEIVRSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEA AQGL+AG N+A ++ + C R ++YIGV++DDL + G EP Sbjct: 366 FFAGQINGTTGYEEAGAQGLLAGTNAALRAQGRESWCPRRDEAYIGVLVDDLITLGTQEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT G +LG I + R F + LKS + Sbjct: 426 YRMFTSRAEYRLILREDNADLRLTEKGRELGLIDDARWAAFCAKREGIEREEQRLKSTWV 485 Query: 484 TSKNLSSTSISFKQDGKTRTAYEF-----LSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 ++ K T A+E+ L+ P+ L V E+++I Sbjct: 486 RPGTPQGQAVVDKFG--TPLAHEYSLLNLLARPEVDYAGLIE-ATGGEVIDPQVAEQVEI 542 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 ++ YA Y RQ E ++ E +P D DY+++ LS E++ KL +P L QAS+I Sbjct: 543 KTKYAGYIDRQQEEIARLRASEDTRLPVDIDYTTISGLSKEIQGKLEQTRPETLGQASRI 602 Query: 599 EGMTPAALNLLLIYIKK 615 G+TPAA++LLLI++KK Sbjct: 603 PGVTPAAISLLLIHLKK 619 >gi|291615571|ref|YP_003518313.1| GidA [Pantoea ananatis LMG 20103] gi|291150601|gb|ADD75185.1| GidA [Pantoea ananatis LMG 20103] Length = 696 Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust. Identities = 291/616 (47%), Positives = 389/616 (63%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 74 FDVIVIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 133 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 134 GGLMAGAIDRAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVD 193 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R TVVLT GTFL G IHIG GR GD PS L Sbjct: 194 DLIVENDRVVGAVTQMGLKFRAKTVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLAKR 253 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 RLKTGTP R+D ++I + Q D + FSFM + + +Q+ C +T Sbjct: 254 LRALPLRVDRLKTGTPPRIDARSIDFSVLAPQHGDNPMPVFSFMGNAGQHPQQVPCWMTY 313 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 314 TNEKTHDVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNSHQIFLEPEGLTSNE 373 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L TLE+K I GLF Sbjct: 374 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKLTLESKFIDGLF 433 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR+S + R +Y+GV++DDL + G EPY Sbjct: 434 FAGQINGTTGYEEAAAQGLLAGLNAARQSADKEGWAPRRDQAYLGVLVDDLCTLGTKEPY 493 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R RF + ++ R L+ + + Sbjct: 494 RMFTSRAEYRLMLREDNADLRLTETGRELGLVDDARWARFNQKLEAIEQERQRLRDIWVH 553 Query: 485 SKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 K+ + +I+ K +A + L P+ + L ++ + E+++I+ Sbjct: 554 PKSEHVEAVNTITSSPLTKEASAEDLLRRPEMTYLKLMALDAFGPALADEQAAEQVEIQV 613 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 614 KYEGYIARQQEEIDRQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPVSIGQASRISG 673 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+++LLIY+KK Sbjct: 674 VTPAAISILLIYLKKQ 689 >gi|229542321|ref|ZP_04431381.1| glucose inhibited division protein A [Bacillus coagulans 36D1] gi|229326741|gb|EEN92416.1| glucose inhibited division protein A [Bacillus coagulans 36D1] Length = 629 Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust. Identities = 283/618 (45%), Positives = 396/618 (64%), Gaps = 7/618 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEA AA++GA T +IT I M CNP+IGG KG +VREIDAL Sbjct: 9 YDVIVVGAGHAGCEAGLAAARIGAKTLMITINLDMIAYMPCNPSIGGPAKGIVVREIDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MGR D IQ R+LN KGPAV+ R QAD+ Y+ M++ I +QENL ++QG V Sbjct: 69 GGEMGRNIDKTYIQMRMLNTGKGPAVQALRAQADKVEYQREMKKTIENQENLTLLQGMVE 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + +V + + TVVLTTGTFLRG I IG+LK +G PS +L Sbjct: 129 ELVLEDGVCKGVVTKTGAKYTAKTVVLTTGTFLRGEIIIGELKYSSGPNNQQPSIALAEK 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + FD R KTGTP R++GKTI + KTE Q D FS+ T K+ Q+ C +T T Sbjct: 189 LEELGFDLVRFKTGTPPRVNGKTIDYSKTEIQPGDLEPRAFSYETTKMITDQLPCWLTYT 248 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N TH II N+ + ++SG IK GPRYCPSIEDK+VRF ++ HQ+FLEPEG +T+ V Sbjct: 249 NERTHAIIDANLGRAPMFSGMIKGTGPRYCPSIEDKVVRFHDKPRHQLFLEPEGRHTEEV 308 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+ST++PEE+Q + + +I GLE ++RPGYAIEYD I P +L+PTLETKK+ L+ Sbjct: 309 YVQGLSTSMPEEVQREILASIEGLEHAKMMRPGYAIEYDAITPTQLWPTLETKKVKNLYT 368 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGT+GYEEAA QG++AGIN+A+++ + + R+D+YIGV+IDDL +KG EPYR Sbjct: 369 AGQINGTSGYEEAAGQGIIAGINAAQRAMGKEELVLGRSDAYIGVLIDDLVTKGTREPYR 428 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 + TSRAEYR+ LR DNAD RLT IG ++G I E R ++F Q LKS++L Sbjct: 429 LLTSRAEYRLLLRHDNADLRLTEIGYQIGLISEERYRKFTAKKQAIEAEIKRLKSVILKP 488 Query: 486 KNLSSTSI-----SFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + T I S +DG A + L P+ +++ ++ P + S V E+++I+ Sbjct: 489 DEKTQTLIREAGGSELKDGI--HAADLLKRPEMRYEHIKALVPPEMELSPEVEEQVEIQI 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y + + + + +K E + IP D DY ++ L+ E ++KL+ ++P ++ QAS+I G Sbjct: 547 KYEGYIAKSLQQVERMKKLEDKKIPSDIDYDAIHGLATEARQKLNKVRPISIAQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 + PA +++LL+YI++ + Sbjct: 607 VNPADISILLVYIEQGKI 624 >gi|254797057|ref|YP_003081895.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neorickettsia risticii str. Illinois] gi|254590303|gb|ACT69665.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neorickettsia risticii str. Illinois] Length = 627 Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust. Identities = 290/610 (47%), Positives = 397/610 (65%), Gaps = 9/610 (1%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDG 67 V+VIGGGHAG EAAA +A+LG T L+T+ IG MSCNPAIGG+GKG++V+EIDA+ G Sbjct: 4 VVVIGGGHAGVEAAAASARLGVETLLVTNSVMNIGEMSCNPAIGGIGKGNVVKEIDAMGG 63 Query: 68 LMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGF 127 +M D A I R+LN KG AV GPR QADR+LY+ A+ + E L +++ V Sbjct: 64 VMALATDRASIHSRILNRSKGAAVWGPRAQADRKLYKCAVLGLLTKYEKLSILEDHVTDL 123 Query: 128 NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFM 187 E + + +V + IRCS VLTTGTFL GVI GK ++ GR G+ S L N+ Sbjct: 124 VIENDRLMGVVGEKTGTIRCSAAVLTTGTFLNGVIQTGKERVEGGRFGEKASQCLGNTLR 183 Query: 188 KFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTNL 247 + F RL+TGTPARL +I + +Q D IPFS+M +IT Q+ C IT TN Sbjct: 184 RH-FKIARLRTGTPARLYKDSINYSALVEQPGDSPPIPFSYMNTEITVPQVSCYITHTNG 242 Query: 248 ETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYP 307 +TH II ++K SAI +G I + GPRYCPSIEDK+VRF E++ HQIFLEPEGL+++++YP Sbjct: 243 KTHEIIRNSLKFSAIRNG-ISARGPRYCPSIEDKVVRFAEKDSHQIFLEPEGLDSELIYP 301 Query: 308 NGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAG 367 NGIS +LP+EIQ +FIR+I GLEK + R Y IEYDYI+P+EL TLE+K++ L+ AG Sbjct: 302 NGISNSLPKEIQEEFIRSIAGLEKARVARYAYTIEYDYIDPRELRSTLESKRVKNLYFAG 361 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL-EPYRM 426 QINGTTGYEEAA QG+VAG N+A + SR++ YIGVMIDDL + G EPYR+ Sbjct: 362 QINGTTGYEEAAGQGIVAGSNAAGAG-----LIISRSEGYIGVMIDDLITLGTNGEPYRL 416 Query: 427 FTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSK 486 FTSRAEYR++LRPDNAD RLT ++G + E R + K + ++ +S L L T Sbjct: 417 FTSRAEYRLNLRPDNADFRLTEKAYRVGLVDEERYAAYRKKYETFHKYKSKLNELSTTPY 476 Query: 487 NLSSTS-ISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAY 545 L+ IS QDG ++A+ ++ P F ++L I + + E L I + Y Y Sbjct: 477 ELAKIEGISVAQDGVRKSAWNLITQPLFGFEDLLRIWSELSEVPEEYREMLTINARYEPY 536 Query: 546 TGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAA 605 RQ + K ++ EK +IP +FD+ ++ LS+E+ EKL ++P L QA +I G+TPAA Sbjct: 537 LLRQEQDIKLLRNNEKVVIPSNFDFGAIKTLSSEIIEKLQAVRPETLAQAKRISGVTPAA 596 Query: 606 LNLLLIYIKK 615 + +LI++++ Sbjct: 597 IVSILIHLRR 606 >gi|54310653|ref|YP_131673.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Photobacterium profundum SS9] gi|81170567|sp|Q6LLF7|MNMG_PHOPR RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|46915096|emb|CAG21871.1| Putative glucose inhibited division protein A [Photobacterium profundum SS9] Length = 629 Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust. Identities = 292/626 (46%), Positives = 397/626 (63%), Gaps = 23/626 (3%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DA Sbjct: 6 NFDVIVVGGGHAGTEAALAAARMGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLM + D GIQFR LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 66 LGGLMAKATDKGGIQFRTLNSSKGPAVRATRAQADRALYKAAVREVLENQPNLMLFQQAV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + +V + R ++VVLT GTFL G IHIG GR GD PS +L + Sbjct: 126 DDLIVENDRVIGVVTEMGLKFRATSVVLTVGTFLGGKIHIGLENYSGGRAGDPPSIALAS 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 + F RLKTGTP R+D +T+ + + + Q D + FSFM + RQI C IT Sbjct: 186 RLRELPFRVDRLKTGTPPRIDARTVDFSRLQAQHGDNPIPTFSFMGKTSDHPRQIPCYIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +YSG I+ GPRYCPSIEDK++RF ++N HQIF+EPEGL T Sbjct: 246 YTNEKTHDVIRNNLDRSPMYSGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEGLTTH 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q Q +R++ G E I+RPGYAIEYD+ +P++L T ETK I GL Sbjct: 306 ELYPNGISTSLPFDVQIQIVRSMDGFENAAIMRPGYAIEYDFFDPRDLKQTFETKFIDGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+A +S + C R +Y+GV+IDDL++ G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGMNAALQSQGKEGWCPRRDQAYMGVLIDDLSTMGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT IG + G + + R RF + ++ R LK + + Sbjct: 426 YRMFTSRAEYRLLLREDNADLRLTEIGREFGLVDDDRWARFNQKVENIEQERQRLKDIWI 485 Query: 484 TSKN--------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVI-- 533 + + T I+ + +G+ + L P+ + + + FS I Sbjct: 486 NPNSDHVDEINKILKTPIAREANGE-----DLLRRPEIT----YKLLTQLEDFSPAHIDT 536 Query: 534 ---ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 E+++I+ Y Y RQ E ++ E +P D +YS + LSNE+ KL+ KP Sbjct: 537 QASEQVEIQVKYQGYIDRQKDEVEKSLRHETTKLPFDLEYSIVKGLSNEVIAKLTDAKPE 596 Query: 591 NLLQASKIEGMTPAALNLLLIYIKKN 616 + AS+I G+TPAA++LLL+Y+KK+ Sbjct: 597 TIGMASRISGITPAAISLLLVYLKKH 622 >gi|319760786|ref|YP_004124723.1| glucose inhibited division protein a [Alicycliphilus denitrificans BC] gi|317115347|gb|ADU97835.1| glucose inhibited division protein A [Alicycliphilus denitrificans BC] Length = 659 Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust. Identities = 295/641 (46%), Positives = 396/641 (61%), Gaps = 27/641 (4%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNP+IGG+GKGHLV+E+D Sbjct: 5 QEFDVIVVGGGHAGTEAALAAARMGCRTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D GIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q Sbjct: 65 ALGGAMALATDEGGIQFRILNSSKGPAVRATRAQADRILYKAAIRRMLENQPNLWLFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + ++ V Q R VVLT GTFL G IH+G AGR GD P+ SL Sbjct: 125 VDDLMVEGDRVAGAVTQIGLRFRARAVVLTAGTFLDGRIHVGLNNYAAGRAGDPPAVSLS 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFAD-------ERLIP-FSFMTDKITN 235 + GRLKTGTP R+DG++I + + E+Q D E ++P FSFM + + Sbjct: 185 ARLKELKLPQGRLKTGTPPRIDGRSIDFSQCEEQPGDGMPGGVNEGVLPVFSFMGSTVMH 244 Query: 236 -RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 RQ+ C IT TN TH II S +++G I+ GPRYCPS+EDKI RF ++ HQIF Sbjct: 245 PRQVPCWITHTNARTHEIIRSGFDRSPMFTGKIEGVGPRYCPSVEDKINRFADKESHQIF 304 Query: 295 LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT 354 LEPEGL T YPNGIST+LP +IQ+ +R++ GLE +I+RPGYAIEYDY +P+ L + Sbjct: 305 LEPEGLTTHEFYPNGISTSLPFDIQYALVRSMRGLENAHILRPGYAIEYDYFDPRSLKSS 364 Query: 355 LETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDD 414 ET++I GLF AGQINGTTGYEEAAAQGL AG+N+A + R ++Y+GV++DD Sbjct: 365 FETRQIQGLFFAGQINGTTGYEEAAAQGLFAGLNAALQCRGEAPWLPRRDEAYLGVLVDD 424 Query: 415 LTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFL 474 L +KGV EPYRMFTSRAE+R+ LR DNAD RLT G ++G + + R FA + Sbjct: 425 LVTKGVTEPYRMFTSRAEFRLQLREDNADMRLTEAGRRMGLVDDARWDAFAAKRDAVSRE 484 Query: 475 RSLLKSLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS- 530 LKS + + L++ + K ++ L PD L S+ D K++S Sbjct: 485 TERLKSTWVNPRILAAAEAERVLGKAIDHEYNLFDLLRRPDVDYARLMSL--DGGKYASG 542 Query: 531 ------------LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSN 578 VIE+++I + YA Y RQ E + E+ +P + DY + ALS Sbjct: 543 DVSRETLGALSEPVIEQVEIAAKYAGYIDRQKDEVQRAAHYEQLRLPPELDYMQVSALSI 602 Query: 579 ELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 E+++KL +P L QAS+I G+TPAA++LLL+++KK K Sbjct: 603 EVRQKLQKHRPETLGQASRISGVTPAAISLLLVHLKKGGFK 643 >gi|212712654|ref|ZP_03320782.1| hypothetical protein PROVALCAL_03749 [Providencia alcalifaciens DSM 30120] gi|212684870|gb|EEB44398.1| hypothetical protein PROVALCAL_03749 [Providencia alcalifaciens DSM 30120] Length = 629 Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust. Identities = 289/619 (46%), Positives = 392/619 (63%), Gaps = 9/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLVREIDA Sbjct: 6 QFDVIVIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVREIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLM D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 66 LGGLMATATDKAGIQFRTLNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQPV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E N ++ V + + VVLT GTFL G IHIG GR GD P+ +L Sbjct: 126 EDLIVENNRVTGAVTRMGLKFKAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPAITLSQ 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 + RLKTGTP R+D +TI + + +Q D+ + FSF+ + + +Q+ C IT Sbjct: 186 RLRELPLRVNRLKTGTPPRIDARTIDFSQLAQQLGDDPMPVFSFLGSQEQHPQQVPCYIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIFLEPEGL ++ Sbjct: 246 YTNEQTHDVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADKNAHQIFLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q Q + ++ G+E I+RPGYAIEYD+ +P++L TLE+K I GL Sbjct: 306 EIYPNGISTSLPFDVQMQIVHSMKGMENARIVRPGYAIEYDFFDPRDLKQTLESKFIEGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+A+ + LD R +Y+GV++DDL + G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGLNAAQHAFGLDGWFPRRDQAYVGVLVDDLCTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT G +LG + + R + F + ++ R LK + + Sbjct: 426 YRMFTSRAEYRLMLREDNADLRLTEKGRELGLVDDVRWEHFNRKVELIEKERQRLKDIWV 485 Query: 484 TSKNLSSTSIS---FKQDGKTRTAYEFLSYPDFSIQNLFSI---CPDARKFSSLVIERLQ 537 K+ + I K + L P+ + Q L S+ P + ++++ Sbjct: 486 HPKSDNHEEIDQILTVPLSKEANGEDLLRRPEMTYQMLTSLNLFAPGVEDPQA--ADQVE 543 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ Y Y RQ E + E L+P D DY + LSNE+ KL+ KP ++ QAS+ Sbjct: 544 IQVKYEGYIARQQEEIERQLRNENTLLPVDLDYKQVKGLSNEVMAKLNDHKPTSIGQASR 603 Query: 598 IEGMTPAALNLLLIYIKKN 616 I G+TPAA+++LL+++KK Sbjct: 604 ISGITPAAISILLVWLKKQ 622 >gi|261346698|ref|ZP_05974342.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Providencia rustigianii DSM 4541] gi|282565098|gb|EFB70633.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Providencia rustigianii DSM 4541] Length = 629 Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust. Identities = 287/621 (46%), Positives = 398/621 (64%), Gaps = 13/621 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLVREIDA Sbjct: 6 QFDVIVIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVREIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLM D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 66 LGGLMATATDKAGIQFRTLNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQPV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E N ++ V + + +VVLT GTFL G IHIG GR GD P+ SL Sbjct: 126 EDLIVENNRVTGAVTRMGLKFKAKSVVLTVGTFLDGKIHIGLENYSGGRAGDPPAISLSQ 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 + RLKTGTP R+D +TI + + +Q D+ + FSF+ + + +Q+ C IT Sbjct: 186 RLRELPLRVNRLKTGTPPRIDARTIDFSQLAQQLGDDPMPVFSFLGSQEQHPQQVPCYIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIFLEPEGL ++ Sbjct: 246 YTNEQTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADKNAHQIFLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q + + ++ G+E I+RPGYAIEYD+ +P++L TLE+K I GL Sbjct: 306 EIYPNGISTSLPFDVQMKIVHSMKGMENARIVRPGYAIEYDFFDPRDLKQTLESKFIEGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+A+ + L+ R +Y+GV++DDL + G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGLNAAQHAFDLEGWFPRRDQAYVGVLVDDLCTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT G +LG + + R + F + ++ R LK + + Sbjct: 426 YRMFTSRAEYRLMLREDNADLRLTEKGRELGLVDDVRWEHFNRKVEMIEKERQRLKDIWV 485 Query: 484 TSKN--------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIER 535 K+ + S +S + +G+ ++Y + NLF+ + + + ++ Sbjct: 486 HPKSDNHEEIDQILSVPLSKEANGEDLLRRPEMTYQMLTSLNLFAPGVEDPQAA----DQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y RQ E + E L+P D DY + LSNE+ KL+ KP ++ QA Sbjct: 542 VEIQVKYEGYIARQQEEIERQLRNENTLLPVDLDYKQVKGLSNEVMAKLNDHKPTSIGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKKN 616 S+I G+TPAA+++LL+++KK Sbjct: 602 SRISGITPAAISILLVWLKKQ 622 >gi|182416733|ref|ZP_02948132.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium butyricum 5521] gi|237669669|ref|ZP_04529647.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium butyricum E4 str. BoNT E BL5262] gi|182379390|gb|EDT76885.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium butyricum 5521] gi|237654903|gb|EEP52465.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium butyricum E4 str. BoNT E BL5262] Length = 628 Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust. Identities = 280/612 (45%), Positives = 394/612 (64%), Gaps = 3/612 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+G GHAGCEAA +A++G +T + T +I M CNP IGG KGHLVREIDAL Sbjct: 10 FDVIVVGAGHAGCEAALASARMGLNTLVCTINLDSIALMPCNPNIGGTAKGHLVREIDAL 69 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG D IQ R+LN KGPAV R QAD++ Y+ M++ + Q+NL + Q EV Sbjct: 70 GGEMGVNIDHTFIQSRMLNTSKGPAVHSLRAQADKKDYQFRMKKVLEEQDNLKIRQIEVT 129 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E +S +V ++ ++ +C VVL TGT+L+G I IG++ G G P+N L S Sbjct: 130 ELIVEDGKVSGVVTKNGAVFKCKAVVLATGTYLKGKIIIGEVSYSGGPNGLFPANDLSQS 189 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + R KTGTPAR++ K++ + K +Q D++++PFSFM+ K+ Q+ C +T T Sbjct: 190 LLDLGISLRRFKTGTPARINSKSVDFSKMIEQNGDDKIVPFSFMSGKLQKEQVACYLTYT 249 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N ETH II ENI S IY+G IK GPRYCPSIEDK++RF ++ HQIF+EPEG++T + Sbjct: 250 NEETHNIIRENINRSPIYNGSIKGVGPRYCPSIEDKVMRFPDKTQHQIFVEPEGMDTLEM 309 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G S++LPEE+Q + +RT+PGLE V ++R YAIEYD I+P +L PTLE K I GL+ Sbjct: 310 YVGGFSSSLPEEVQIKMLRTLPGLENVEMMRTAYAIEYDSIDPTQLKPTLEFKNIDGLYG 369 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ+NG++GYEEA AQGLVAG+N+A K + + +R+D+YIGV+IDDL +KG EPYR Sbjct: 370 AGQLNGSSGYEEAGAQGLVAGVNAALKIKNQEPLILTRSDAYIGVLIDDLVTKGTNEPYR 429 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 M TSRAEYR+ LR DNAD RLT +G ++G + E R F + LK+L +T+ Sbjct: 430 MMTSRAEYRLLLRQDNADLRLTEMGHRVGLVTEERYNTFLTRKKNIEDELERLKTLKVTN 489 Query: 486 K---NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSY 542 K N SI+ K + YE + P+ L + P+ S + E++ + + Y Sbjct: 490 KKEVNEFLVSINSTPLRKAISFYELMQRPELEYFQLAQLDPERPDLSDDIGEQINVLTKY 549 Query: 543 AAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMT 602 Y QM + + K EK+L+PKD DY+ + L E +KLS +KP ++ QAS+I G++ Sbjct: 550 EGYIQSQMEQVSQFKKFEKKLLPKDIDYNDVSGLRTEAVQKLSNIKPISIGQASRISGVS 609 Query: 603 PAALNLLLIYIK 614 PA +++LLIY++ Sbjct: 610 PADISVLLIYLE 621 >gi|53721015|ref|YP_110001.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei K96243] gi|81170533|sp|Q63PG8|MNMG_BURPS RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|52211429|emb|CAH37420.1| glucose inhibited division protein A [Burkholderia pseudomallei K96243] Length = 657 Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust. Identities = 289/625 (46%), Positives = 392/625 (62%), Gaps = 15/625 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q V Sbjct: 67 GGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRVLYKQAIRRRLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IH+G GR GD + SL + Sbjct: 127 DLMVEGDRVVGAVTQVGVRFRARAVVLTAGTFLDGKIHVGLNHYTGGRAGDPAAVSLSSR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQIECGIT 243 + + GRLKTGTP R+DG+TI + K ++Q D IP FSF+ + +Q+ C +T Sbjct: 187 LKELNLPQGRLKTGTPPRIDGRTIDFSKLDEQPGDLDPIPVFSFLGRAEQHPQQLPCWVT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T+ Sbjct: 247 HTNERTHDIIRSGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP ++Q + ++ GLE+ +I+RPGYAIEYDY +P+ L +LETK I GL Sbjct: 307 EFYPNGISTSLPFDVQLALVHSMRGLEQAHILRPGYAIEYDYFDPRALKSSLETKAIGGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ R + + D C R +Y+GV++DDL ++G+ EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGINAGRYAQEKDAWCPRRDQAYLGVLVDDLVTRGISEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F + + L++ + Sbjct: 427 YRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDDVRWDAFNRKRDAVSRETERLRTTWV 486 Query: 484 TSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----CPDARKFS------S 530 T K L +T++ K + E L P S + + C + + + Sbjct: 487 TPKTLPADEATALLGKPIDHEYSLAELLRRPGVSYDGVCGLRGGECGPSEPLAEDELLLA 546 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 + E+++I Y Y RQ E + E +P DY+ + LS E+ +KL+ +P Sbjct: 547 QIKEQIEIGIKYQGYIERQAGEIERNGANENTRLPDGIDYTEVRGLSFEVSQKLNQFRPE 606 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 + QAS+I GMTPAA++LL++++KK Sbjct: 607 TIGQASRISGMTPAAISLLMVHLKK 631 >gi|116326853|ref|YP_796573.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116329800|ref|YP_799518.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122282424|sp|Q04WG0|MNMG_LEPBJ RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|122285296|sp|Q056V5|MNMG_LEPBL RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|116119597|gb|ABJ77640.1| Glucose-inhibited division protein A [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116123489|gb|ABJ74760.1| Glucose inhibited division protein A [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 635 Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust. Identities = 284/622 (45%), Positives = 389/622 (62%), Gaps = 23/622 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D +V+G GHAG EAA +A+K GA T LIT TIG MSCNPAIGG+ KGH+VRE+DAL Sbjct: 14 FDCVVVGAGHAGSEAAYIASKGGAKTLLITMNLDTIGQMSCNPAIGGIAKGHMVREVDAL 73 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+MG+V D GIQF++LN KGP+V PR QA+++ Y+L ++ + +++NL + Q V Sbjct: 74 GGIMGKVIDNTGIQFKMLNTSKGPSVWAPRAQAEKKEYQLKVKHTLEAEKNLSMRQDTVE 133 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + I + V+LTTGTFL ++HIG + GRM + L S Sbjct: 134 ELLIENDQVIGVKTGRGFEIYTNHVILTTGTFLSSLVHIGTYQNENGRMCEPTVKGLSKS 193 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 K++ GRLKTGTP R+ ++ Q D PFSF T+KIT RQI C IT T Sbjct: 194 LAKYNLKLGRLKTGTPPRIHKNSVDLSVLAIQDGDANPSPFSFSTEKITRRQIPCYITYT 253 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N+ETH++I EN+ S +YSG I+S GPRYCPSIEDK+VRF +R HQ+FLEPEG T + Sbjct: 254 NVETHKLIHENLSLSPMYSGQIQSTGPRYCPSIEDKVVRFADRERHQVFLEPEGYETTEI 313 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG+ST+LPEE+Q + +R++ GLE I+RPGYAIEYDY++P EL PTLETKKI GL+ Sbjct: 314 YLNGVSTSLPEEVQWKLVRSLKGLENAEIVRPGYAIEYDYVDPTELKPTLETKKIKGLYH 373 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAAAQGLVA + LD + F R++SYIGV+IDDL KGV +PYR Sbjct: 374 AGQINGTTGYEEAAAQGLVAAYSVLHSLKNLDPLLFKRSESYIGVLIDDLVYKGVEDPYR 433 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL---- 481 MFTSRAE+R+ LR DNAD RL G +LG + + R + N +R + + Sbjct: 434 MFTSRAEHRLLLRQDNADQRLMKYGYELGLVDQESYDRMKDKYERVNSVREKIYQIPLKP 493 Query: 482 ------VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIER 535 +L K +++ K D FL P+ I+++ + P+ +S Sbjct: 494 SDEFQNLLDQKGITNYKFGMKLDS-------FLKRPEIKIEDVEFMLPEVSSWSESEKNI 546 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRL---IPKDFDYSSLPALSNELKEKLSILKPFNL 592 L++E Y Y R++ + I+++ K L IP+D +Y S+ L E +KL KP L Sbjct: 547 LEMEIKYEGYIKREL---ETIQWKNKYLDLAIPEDINYESIAGLKKEAIQKLKTHKPMTL 603 Query: 593 LQASKIEGMTPAALNLLLIYIK 614 +A +I G+ P+ ++LLL +IK Sbjct: 604 EKAGQISGVDPSDVDLLLYHIK 625 >gi|253997705|ref|YP_003049769.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Methylotenera mobilis JLW8] gi|253984384|gb|ACT49242.1| glucose inhibited division protein A [Methylotenera mobilis JLW8] Length = 639 Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust. Identities = 293/619 (47%), Positives = 395/619 (63%), Gaps = 9/619 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++G T L+TH T+G MSCNP+IGG+GKGHLV+EIDAL Sbjct: 7 FDVIVVGGGHAGTEAALASARMGQKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN KGPAVR R QADR LY+ A++ + +QENL + Q V Sbjct: 67 GGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRVLYKAAIRHRLENQENLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + +V Q VVLT GTFL G++H+G AGR GD PS SL Sbjct: 127 DIILEGDRAAGVVTQIGLRFAAKAVVLTAGTFLGGLVHVGLQNYQAGRAGDPPSVSLAAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+DG+TI + Q D + FSF+ + + Q+ C IT Sbjct: 187 LREIGLPAGRLKTGTPPRIDGRTIDYSVMTIQPGDNPVPVFSFLGNAAQHPAQLPCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II + S +Y+G I+ GPRYCPS+EDKI RF ++ HQIFLEPEGL T+ Sbjct: 247 TNERTHDIIRSGLDRSPMYTGVIEGVGPRYCPSVEDKIHRFADKESHQIFLEPEGLATNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK + GLF Sbjct: 307 IYPNGISTSLPFDIQLALVRSVRGLENAHILRPGYAIEYDYYDPRGLKSSLETKAVQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG N+A + + C +R ++Y+GV++DDL ++GV EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGANAALYAQGKEAWCPARDEAYLGVLVDDLITRGVSEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG KLG + + R + F++ + + LK + Sbjct: 427 RMFTSRAEYRLQLREDNADMRLTEIGRKLGLVDDARWEAFSRKKEAIEREQERLKKTFVQ 486 Query: 485 SKNLSSTSISF---KQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL---VIERLQI 538 NLS+ + K + +E L P S + + S+ DA L V E+++I Sbjct: 487 PANLSAEQMQAVFGKPLEHEYSLFELLRRPAVSYEAVLSL--DASGLGELEPAVREQVEI 544 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + Y Y RQ+ E + +E ++PKD DY + L E ++KL+ KP + QAS+I Sbjct: 545 SAKYQGYIDRQVEEVARSRGQENTILPKDLDYREIHGLPIEAQQKLNAHKPETIGQASRI 604 Query: 599 EGMTPAALNLLLIYIKKNT 617 G+TPAA++LLL+Y+K+ + Sbjct: 605 SGITPAAISLLLVYLKRKS 623 >gi|167740808|ref|ZP_02413582.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei 14] Length = 657 Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust. Identities = 289/625 (46%), Positives = 392/625 (62%), Gaps = 15/625 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q V Sbjct: 67 GGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRVLYKQAIRRRLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IH+G GR GD + SL + Sbjct: 127 DLMVEGDRVVGAVTQVGVRFRARAVVLTAGTFLDGKIHVGLNHYTGGRAGDPAAVSLSSR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQIECGIT 243 + + GRLKTGTP R+DG+TI + K ++Q D IP FSF+ + +Q+ C +T Sbjct: 187 LKELNLPQGRLKTGTPPRIDGRTIDFSKLDEQPGDLDPIPVFSFLGRAEQHPQQLPCWVT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T+ Sbjct: 247 HTNERTHDIIRSGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP ++Q + ++ GLE+ +I+RPGYAIEYDY +P+ L +LE+K I GL Sbjct: 307 EFYPNGISTSLPFDVQLALVHSMRGLEQAHILRPGYAIEYDYFDPRALKSSLESKAIGGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ R + + D C R +Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGINAGRYAQEKDAWCPRRDQAYLGVLVDDLVTRGVSEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F + + L++ + Sbjct: 427 YRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDDVRWDAFNRKRDAVSRETERLRTTWV 486 Query: 484 TSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----CPDARKFS------S 530 T K L +T++ K + E L P S + + C + + + Sbjct: 487 TPKTLPADEATALLGKPIDHEYSLAELLRRPGVSYDGVCGLRGGECGPSEPLAEDELLLA 546 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 + E+++I Y Y RQ E + E +P DY+ + LS E+ +KL+ +P Sbjct: 547 QIKEQIEIGIKYQGYIERQAGEIERNGANENTRLPDGIDYTEVRGLSFEVSQKLNQFRPE 606 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 + QAS+I GMTPAA++LL++++KK Sbjct: 607 TIGQASRISGMTPAAISLLMVHLKK 631 >gi|330822706|ref|YP_004386009.1| glucose inhibited division protein A [Alicycliphilus denitrificans K601] gi|329308078|gb|AEB82493.1| glucose inhibited division protein A [Alicycliphilus denitrificans K601] Length = 677 Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust. Identities = 295/641 (46%), Positives = 396/641 (61%), Gaps = 27/641 (4%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNP+IGG+GKGHLV+E+D Sbjct: 23 QEFDVIVVGGGHAGTEAALAAARMGCRTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVD 82 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D GIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q Sbjct: 83 ALGGAMALATDEGGIQFRILNSSKGPAVRATRAQADRILYKAAIRRMLENQPNLWLFQQA 142 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + ++ V Q R VVLT GTFL G IH+G AGR GD P+ SL Sbjct: 143 VDDLMVEGDRVAGAVTQIGLRFRARAVVLTAGTFLDGRIHVGLNNYAAGRAGDPPAVSLS 202 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFAD-------ERLIP-FSFMTDKITN 235 + GRLKTGTP R+DG++I + + E+Q D E ++P FSFM + + Sbjct: 203 ARLKELKLPQGRLKTGTPPRIDGRSIDFSQCEEQPGDGMPGGVNEGVLPVFSFMGSTVMH 262 Query: 236 -RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 RQ+ C IT TN TH II S +++G I+ GPRYCPS+EDKI RF ++ HQIF Sbjct: 263 PRQVPCWITHTNARTHEIIRSGFDRSPMFTGKIEGVGPRYCPSVEDKINRFADKESHQIF 322 Query: 295 LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT 354 LEPEGL T YPNGIST+LP +IQ+ +R++ GLE +I+RPGYAIEYDY +P+ L + Sbjct: 323 LEPEGLTTHEFYPNGISTSLPFDIQYALVRSMRGLENAHILRPGYAIEYDYFDPRSLKSS 382 Query: 355 LETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDD 414 ET++I GLF AGQINGTTGYEEAAAQGL AG+N+A + R ++Y+GV++DD Sbjct: 383 FETRQIQGLFFAGQINGTTGYEEAAAQGLFAGLNAALQCRGEAPWLPRRDEAYLGVLVDD 442 Query: 415 LTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFL 474 L +KGV EPYRMFTSRAE+R+ LR DNAD RLT G ++G + + R FA + Sbjct: 443 LVTKGVTEPYRMFTSRAEFRLQLREDNADMRLTEAGRRMGLVDDARWDAFAAKRDAVSRE 502 Query: 475 RSLLKSLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS- 530 LKS + + L++ + K ++ L PD L S+ D K++S Sbjct: 503 TERLKSTWVNPRILAAAEAERVLGKAIDHEYNLFDLLRRPDVDYARLMSL--DGGKYASG 560 Query: 531 ------------LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSN 578 VIE+++I + YA Y RQ E + E+ +P + DY + ALS Sbjct: 561 DVSRETLGALSEPVIEQVEIAAKYAGYIDRQKDEVQRAAHYEQLRLPPELDYMQVSALSI 620 Query: 579 ELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 E+++KL +P L QAS+I G+TPAA++LLL+++KK K Sbjct: 621 EVRQKLQKHRPETLGQASRISGVTPAAISLLLVHLKKGGFK 661 >gi|254447507|ref|ZP_05060973.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [gamma proteobacterium HTCC5015] gi|198262850|gb|EDY87129.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [gamma proteobacterium HTCC5015] Length = 628 Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust. Identities = 286/618 (46%), Positives = 395/618 (63%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA+ GA T L+TH T+G MSCNPAIGG+GKGHLV+EIDAL Sbjct: 7 FDVIVIGGGHAGTEAALAAARSGARTLLLTHNIETLGQMSCNPAIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ AD GIQFR LN +KGPAVR R QADR LY+ A+++ + +QENL + Q Sbjct: 67 GGAMGKAADLGGIQFRTLNSRKGPAVRATRAQADRVLYKAAIRQILENQENLSIFQQAAD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + ++ +V Q + TVVLT GTFL G IHIG + GR GD PSN+L Sbjct: 127 DLCVEGDRVTGVVTQSGIVFSAKTVVLTVGTFLGGQIHIGLKQSAGGRAGDPPSNALAER 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 F GRLKTGTP R+D +++ + + E Q D+ + FSFM + Q+ C IT Sbjct: 187 LRALPFRVGRLKTGTPPRIDARSVDFSQLETQPGDDPVPVFSFMGSAQDHPEQVPCHITY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II + + S +YSG I+ GPRYCPSIEDKI+RF +++ HQIF+EPEGLNT Sbjct: 247 TNETTHDIIRQGLDESPMYSGVIEGVGPRYCPSIEDKIMRFADKDRHQIFIEPEGLNTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+L E Q +R+I G E +I RPGYAIEYDY +P++L TLET+ + L+ Sbjct: 307 LYPNGISTSLSFETQMALVRSIKGFENAHITRPGYAIEYDYFDPRDLRNTLETQFVDNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AGIN++ ++ ++ + R +YIGV++DDL ++G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGINASMRAREVGELTLGRDQAYIGVLVDDLITRGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAE+R+ LR DNAD RLT +G +G + + R F + + L+SL + Sbjct: 427 RMFTSRAEHRLLLREDNADLRLTELGRDVGLVDDARWTAFNDKREAVACEKQRLQSLWVQ 486 Query: 485 SKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSICP-DARKFSSLVIERLQIES 540 + + S ++ K K TA + L P+ + L S+ + + V ++++ + Sbjct: 487 PHSPAGKSFAKVTGKALSKEATAADLLKRPEMNYSQLMSLDGIGSGTETPSVADQVETQI 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 YA Y R + + + +E +P D DY S+ LS E+ KL+ +P L QA +I G Sbjct: 547 KYAGYLARAEADIERNRAQENTALPDDIDYPSIRGLSKEVAHKLAEHRPNTLGQAGRIPG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA++LL +++K+ ++ Sbjct: 607 VTPAAISLLRVHLKRRSL 624 >gi|264676173|ref|YP_003276079.1| glucose inhibited division protein A [Comamonas testosteroni CNB-2] gi|262206685|gb|ACY30783.1| glucose inhibited division protein A [Comamonas testosteroni CNB-2] Length = 653 Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust. Identities = 294/642 (45%), Positives = 400/642 (62%), Gaps = 23/642 (3%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M + +DVIV+GGGHAG EAA AA++G+ T L+TH T+G MSCNP+IGG+GKGHLV+ Sbjct: 1 MYPQEFDVIVVGGGHAGTEAALAAARMGSKTLLLTHNIETLGQMSCNPSIGGIGKGHLVK 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DAL G M D GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Sbjct: 61 EVDALGGAMALATDKGGIQFRILNSSKGPAVRATRAQADRILYKAAIREMLENQPNLWLF 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + + V Q R TVVLT GTFL G IH+G AGR GD P+ Sbjct: 121 QQAVDDLMVEGDRVVGAVTQVGLKFRSRTVVLTAGTFLDGKIHVGLNNYAAGRAGDPPAV 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFAD-------ERLIP-FSFMTDK 232 SL + GRLKTGTP R+DG++I + + E+Q D E +P FSFM ++ Sbjct: 181 SLSARLKELKLPQGRLKTGTPPRIDGRSIDFSQCEEQPGDGMPGGVNEGEVPVFSFMGNR 240 Query: 233 ITN-RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGH 291 + RQ+ C IT TN TH II S +++G I+ GPRYCPS+EDKI RF ++ H Sbjct: 241 AMHPRQMPCWITHTNARTHEIIRSGFDRSPMFTGKIEGVGPRYCPSVEDKINRFADKENH 300 Query: 292 QIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKEL 351 QIFLEPEGL T YPNGIST+LP +IQ++ +R++ GLE +I+RPGYAIEYDY +P+ L Sbjct: 301 QIFLEPEGLTTHEFYPNGISTSLPFDIQYELVRSMKGLENAHILRPGYAIEYDYFDPRSL 360 Query: 352 FPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 + ETK+I GLF AGQINGTTGYEEAAAQGL AG+N+A + R ++Y+GV+ Sbjct: 361 KSSFETKQIQGLFFAGQINGTTGYEEAAAQGLFAGLNAALQCRGEGPWMPRRDEAYLGVL 420 Query: 412 IDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEY 471 +DDL +KGV EPYRMFTSRAE+R+ LR DNAD RLT G ++G + + R F++ Sbjct: 421 VDDLITKGVTEPYRMFTSRAEFRLQLREDNADMRLTEAGRQMGLVDDARWDSFSRKRDAV 480 Query: 472 NFLRSLLKSLVLTSKNLS---STSISFKQDGKTRTAYEFLSYPDFSIQNLFS-------- 520 + LKS + + ++ S + K + ++ L P L Sbjct: 481 SRETERLKSTWVNPRVVAAEESERVLGKAMEREYNLFDLLRRPGVDYDKLMGMNQGKYAS 540 Query: 521 --ICPDA-RKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALS 577 + P+A + S+ VIE+++I + Y+ Y RQ E + E+ +P DFDY + ALS Sbjct: 541 ADVQPEALGELSAPVIEQVEIAAKYSGYIDRQKDEVERAAHFERLRLPLDFDYMQVAALS 600 Query: 578 NELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 E+++KL +P L QAS+I G+TPAA++LL++++KK K Sbjct: 601 FEVRQKLQKHRPETLGQASRISGVTPAAISLLMVHLKKGGFK 642 >gi|319428565|gb|ADV56639.1| glucose inhibited division protein A [Shewanella putrefaciens 200] Length = 629 Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust. Identities = 295/615 (47%), Positives = 384/615 (62%), Gaps = 5/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA++G+ T L+TH T+G MSCNPAIGG+GKGHLV+EIDAL Sbjct: 7 FDVIVVGGGHAGTEAALAAARMGSKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D AGIQFR LN KGPAVR R QADR LYR +Q + +Q NL + Q V Sbjct: 67 GGAMAIATDYAGIQFRTLNSSKGPAVRATRAQADRALYRQKIQNILQNQANLRIFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + +V Q +VLTTGTFL G IHIG GR GD P+ +L N Sbjct: 127 DLIVENDRVVGVVTQMGLAFESPAIVLTTGTFLSGKIHIGLENYSGGRAGDPPAIALANR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D TI + + +Q D L SFM D + +QI C IT Sbjct: 187 LRELPIRVGRLKTGTPPRIDANTIDFSQMAEQKGDSPLPVMSFMGDVSHHPKQISCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH II + S +YSG I+ GPRYCPSIEDKI RF +++ HQIF+EPEGLNT Sbjct: 247 TNEKTHEIIRGGLDRSPMYSGVIEGIGPRYCPSIEDKIHRFSDKSSHQIFIEPEGLNTTE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q +R+I G+E I+RPGYAIEYDY +P++L +LETK I+GLF Sbjct: 307 IYPNGISTSLPFDVQLNLVRSIKGMENAEIVRPGYAIEYDYFDPRDLKNSLETKTINGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N++ + D C R ++Y+GV++DDL++ G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGMNASLQVQGKDAWCPRRDEAYLGVLVDDLSTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNF-LRSLLKSLVL 483 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F++ ++ L+ L V Sbjct: 427 RMFTSRAEYRLLLREDNADIRLTAKGRELGLVDDTRWAAFSEKLESIELELQRLRAQWVH 486 Query: 484 TSKNLSSTSISFKQDGKTRTAY--EFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 + L +R A E L P+ L I L E++QI+ Sbjct: 487 PNSPLIHALNPHLNTPISREASFEELLRRPEMDYSKLMQIEGFGPGLEDPLAAEQVQIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y+ Y RQ E + E +P DY +P LSNE+ KL+ KP + QAS+I G Sbjct: 547 KYSGYIQRQQEEINKAVRNENTGLPLHLDYKEVPGLSNEVIAKLNSHKPETIGQASRISG 606 Query: 601 MTPAALNLLLIYIKK 615 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVHLKK 621 >gi|28899854|ref|NP_799459.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio parahaemolyticus RIMD 2210633] gi|260361980|ref|ZP_05774985.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio parahaemolyticus K5030] gi|260876533|ref|ZP_05888888.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio parahaemolyticus AN-5034] gi|260897410|ref|ZP_05905906.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio parahaemolyticus Peru-466] gi|260902395|ref|ZP_05910790.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio parahaemolyticus AQ4037] gi|31076670|sp|Q87K98|MNMG_VIBPA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|28808106|dbj|BAC61343.1| glucose inhibited division protein A [Vibrio parahaemolyticus RIMD 2210633] gi|308087884|gb|EFO37579.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio parahaemolyticus Peru-466] gi|308090424|gb|EFO40119.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio parahaemolyticus AN-5034] gi|308107142|gb|EFO44682.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio parahaemolyticus AQ4037] gi|308114121|gb|EFO51661.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio parahaemolyticus K5030] Length = 631 Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust. Identities = 294/624 (47%), Positives = 389/624 (62%), Gaps = 11/624 (1%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA +A+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHENFDVIVVGGGHAGTEAALASARTGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAEAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRNALENAPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E++ + +V Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQSVDDLIVEQDRVVGVVTQMGLKFHAKAVVLTVGTFLGGKIHIGMESSSGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D +T+ + E Q D FSFM + + RQI Sbjct: 182 ALADRLRELPFRVDRLKTGTPPRIDARTVDFSVLEAQHGDNPTPVFSFMGKREHHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CFITHTNEQTHEVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTHELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 ISGLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 ISGLFFAGQINGTTGYEEAAAQGLMAGLNASLYSQGKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG I + R RF + I+ R LK Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLIDDVRWARFNEKIENMETERQRLK 481 Query: 480 SLVLTSKNLSSTSIS-FKQDGKTRTAYE-----FLSYPDFSIQNLFSICPDARKF-SSLV 532 S T N +S I + KT A E L P+ S L + A Sbjct: 482 S---TWVNPNSAGIDELNKLLKTPMAREASGEDLLRRPEISYSQLTQLDAFAPALEDQQA 538 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 E+++I+ Y Y RQ E ++ E +P D DY + LSNE+ KLS KP ++ Sbjct: 539 AEQVEIQVKYDGYIKRQQEEIEKSLRHEHTKLPADLDYKDVKGLSNEVVAKLSEAKPESI 598 Query: 593 LQASKIEGMTPAALNLLLIYIKKN 616 AS+I G+TPAA+++LL+++KK+ Sbjct: 599 GIASRISGITPAAISILLVHLKKH 622 >gi|296137580|ref|YP_003644822.1| glucose inhibited division protein A [Thiomonas intermedia K12] gi|295797702|gb|ADG32492.1| glucose inhibited division protein A [Thiomonas intermedia K12] Length = 676 Score = 549 bits (1415), Expect = e-154, Method: Compositional matrix adjust. Identities = 300/629 (47%), Positives = 393/629 (62%), Gaps = 13/629 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R++DV+VIGGGHAG EAA AA++G +T L+TH T+G MSCNP+IGG+GKGHLV+E+D Sbjct: 37 RNFDVVVIGGGHAGTEAALAAARMGCATLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVD 96 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D AGIQFR+LN KGPAVR R QADR+LY+ A++ + Q NL + Q Sbjct: 97 ALGGAMAEATDEAGIQFRILNASKGPAVRATRAQADRQLYKRAIRGRLEDQPNLWLFQQA 156 Query: 124 VAGFNTEKN----IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 E ++++V Q R TVVLT GTFL G IHIG + AGR GD PS Sbjct: 157 ADDLLVESTGQGERVTAVVTQTGIRFRTRTVVLTAGTFLDGKIHIGLDQYAAGRAGDPPS 216 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQ 237 L GRLKTGTPAR+DG+TI + K +Q D +P FSF+ + Q Sbjct: 217 LRLSARLKALALPQGRLKTGTPARIDGRTIDFSKLIEQPGDLNPMPVFSFLGSADQHPAQ 276 Query: 238 IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 + C IT T +TH II + S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEP Sbjct: 277 VACWITHTTEQTHDIIRAGLDRSPMFTGVIEGVGPRYCPSIEDKIHRFADKSSHQIFLEP 336 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EGL T+ YPNGIST+LP ++Q + +IPGLE +++RPGYAIEYDY NP L +LET Sbjct: 337 EGLQTNEFYPNGISTSLPFDVQIAMVHSIPGLENAHLLRPGYAIEYDYFNPMALKTSLET 396 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 K I GLF AGQINGTTGYEEAAAQGL+AGIN+A + D C R +Y+GV++DDL + Sbjct: 397 KAIDGLFFAGQINGTTGYEEAAAQGLLAGINAALQVQGRDPWCPRRDQAYLGVLVDDLVT 456 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL 477 KGV EPYRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F + Sbjct: 457 KGVSEPYRMFTSRAEYRLSLREDNADLRLTEIGRELGVVNDARWDAFCRKRDAIEREIQR 516 Query: 478 LKSLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNL--FSICPDARKFSSLV 532 L++ +T ++L + ++ K + + L P+ L F A +F Sbjct: 517 LRTTWVTPQSLPPEQAEALLGKSIEREYNLADLLRRPELRYDTLAAFPHPAFAPEFPLGE 576 Query: 533 IERLQIE--SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 ER Q+E YA Y RQ E +E +P D DY + LS E+++KL+ +P Sbjct: 577 TEREQVEIHLKYAGYIERQQDEVDRAAQQESLRLPADLDYREVSGLSIEVQQKLNQARPE 636 Query: 591 NLLQASKIEGMTPAALNLLLIYIKKNTVK 619 L AS++ GMTPAA++LLLI+++K +K Sbjct: 637 TLGLASRLSGMTPAAVSLLLIHLRKGVLK 665 >gi|206970241|ref|ZP_03231194.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus AH1134] gi|206734818|gb|EDZ51987.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus AH1134] Length = 629 Score = 549 bits (1415), Expect = e-154, Method: Compositional matrix adjust. Identities = 285/622 (45%), Positives = 396/622 (63%), Gaps = 13/622 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLSLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E+ + +V Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEEGVCKGVVTQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKEEVVLGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G K+G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEVGRKIGLIKEERYERFTNKKLQIEQEKERLSSIIIK 486 Query: 485 S--------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 +N+ + + +DG A + L P+ + +++ + P + S V E++ Sbjct: 487 PRPEVQELIRNIGGSEL---KDGI--RASDLLRRPEMTYEHIHLLVPSEVELSDEVKEQV 541 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y Y + + + + +K E + IP D DY ++ ++++E ++KL ++P ++ QAS Sbjct: 542 EIQIKYEGYIEKSLQQVERMKKMENKKIPVDIDYDAISSIASEARQKLKDVRPLSMGQAS 601 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+ PA +++LL+YI++ + Sbjct: 602 RISGVNPADISILLVYIEQGKI 623 >gi|314934964|ref|ZP_07842323.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus caprae C87] gi|313652894|gb|EFS16657.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus caprae C87] Length = 625 Score = 549 bits (1415), Expect = e-154, Method: Compositional matrix adjust. Identities = 281/619 (45%), Positives = 397/619 (64%), Gaps = 3/619 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VREID Sbjct: 3 QEYDVIVIGAGHAGIEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVREID 62 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R I ++NLD++QG Sbjct: 63 ALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEDNLDIMQGM 122 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E+N + + + R VV+TTGTFLRG I +G +K +G PS +L Sbjct: 123 VDELIIEENEVKGVRTNIGTEYRSKAVVVTTGTFLRGEIILGNMKYSSGPNHQLPSITLA 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 ++ + FD R KTGTP R++ KTI + KTE Q D+ FS+ T + Q+ C +T Sbjct: 183 DNLRQLGFDVVRFKTGTPPRVNAKTIDYSKTEIQPGDDVGRAFSYETTEYILDQLPCWLT 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN ETH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG NT+ Sbjct: 243 YTNGETHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRNTN 302 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETK I L Sbjct: 303 EVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKSIKNL 362 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGT+GYEEAA QG++AGIN+A K SR+D+YIGV+IDDL +KG EP Sbjct: 363 YTAGQINGTSGYEEAAGQGIMAGINAAGKVLGTGEKILSRSDAYIGVLIDDLVTKGTNEP 422 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G +LG I E R RF + Q+ L + + Sbjct: 423 YRLLTSRAEYRLLLRHDNADLRLTDVGYELGMISEERYARFNEKRQQIQNEIQRLTDIRI 482 Query: 484 TSKNLSSTSISFKQDGKTRT---AYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + + + I K + + A + L P+ + + I + + V E+++I++ Sbjct: 483 KPNDHTQSVIESKGGSRLKDGILAIDLLRRPEMTYDTILEILEEDHQLPDAVEEQVEIQT 542 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y + + + +++K E++ IP+D DYS + +L++E +EKL+ +KP N+ QAS+I G Sbjct: 543 KYEGYINKSLQQVEKVKRMEEKKIPEDLDYSKVDSLASEAREKLAEVKPLNIAQASRISG 602 Query: 601 MTPAALNLLLIYIKKNTVK 619 + PA +++LL+Y+++ ++ Sbjct: 603 VNPADISILLVYLEQGKLQ 621 >gi|156972768|ref|YP_001443675.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio harveyi ATCC BAA-1116] gi|166224337|sp|A7N0X6|MNMG_VIBHB RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|156524362|gb|ABU69448.1| hypothetical protein VIBHAR_00433 [Vibrio harveyi ATCC BAA-1116] Length = 631 Score = 549 bits (1415), Expect = e-154, Method: Compositional matrix adjust. Identities = 286/625 (45%), Positives = 393/625 (62%), Gaps = 13/625 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA +A+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHENFDVIVVGGGHAGTEAALASARTGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAEAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRNALENAPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V +++ + +V Q + VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQSVDDLIVDQDRVVGVVTQMGLKFQAKAVVLTVGTFLGGKIHIGMESSSGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D +++ + E Q D FSFM + RQI Sbjct: 182 ALADRLRELPFRVDRLKTGTPPRIDARSVDFSVLEAQHGDNPTPVFSFMGKREHQPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CFITHTNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTHELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 ISGLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 ISGLFFAGQINGTTGYEEAAAQGLMAGLNASLHSQGKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG I + R RF + I+ R LK Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLIDDARWARFNEKIENMETERQRLK 481 Query: 480 SLVLTSKN--------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL 531 S + + L T ++ + G+ +SY D + + F+ + ++ S Sbjct: 482 STWMNPNSAGIDELNKLLKTPMAREASGEDLLRRPEISYSDLTQLDAFAPALEDQQAS-- 539 Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 E+++I+ Y Y RQ E ++ E +P D DY + LSNE+ KL+ KP + Sbjct: 540 --EQVEIQVKYDGYIKRQQEEIEKSLRHEHTKLPADLDYKDVKGLSNEVVAKLTEAKPES 597 Query: 592 LLQASKIEGMTPAALNLLLIYIKKN 616 + AS+I G+TPAA+++LL+++KK+ Sbjct: 598 IGIASRISGITPAAISILLVHLKKH 622 >gi|328471205|gb|EGF42107.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio parahaemolyticus 10329] Length = 631 Score = 549 bits (1415), Expect = e-154, Method: Compositional matrix adjust. Identities = 294/624 (47%), Positives = 389/624 (62%), Gaps = 11/624 (1%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA +A+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHENFDVIVVGGGHAGTEAALASARTGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAEAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRNALENAPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E++ + +V Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQSVDDLIVEQDRVVGVVTQMGLKFHAKAVVLTVGTFLGGKIHIGMESSSGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D +T+ + E Q D FSFM + + RQI Sbjct: 182 ALADRLRELPFRVDRLKTGTPPRIDARTVDFSVLEAQHGDNPTPIFSFMGKREHHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CFITHTNEQTHEVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTHELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 ISGLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 ISGLFFAGQINGTTGYEEAAAQGLMAGLNASLYSQGKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG I + R RF + I+ R LK Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLIDDVRWARFNEKIENMETERQRLK 481 Query: 480 SLVLTSKNLSSTSIS-FKQDGKTRTAYE-----FLSYPDFSIQNLFSICPDARKF-SSLV 532 S T N +S I + KT A E L P+ S L + A Sbjct: 482 S---TWVNPNSAGIDELNKLLKTPMAREASGEDLLRRPEISYSQLTQLDAFAPALEDQQA 538 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 E+++I+ Y Y RQ E ++ E +P D DY + LSNE+ KLS KP ++ Sbjct: 539 AEQVEIQVKYDGYIKRQQEEIEKSLRHEHTKLPADLDYKDVKGLSNEVVAKLSEAKPESI 598 Query: 593 LQASKIEGMTPAALNLLLIYIKKN 616 AS+I G+TPAA+++LL+++KK+ Sbjct: 599 GIASRISGITPAAISILLVHLKKH 622 >gi|228955733|ref|ZP_04117728.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229072948|ref|ZP_04206144.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus F65185] gi|229082697|ref|ZP_04215144.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus Rock4-2] gi|229181729|ref|ZP_04309052.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus 172560W] gi|229193734|ref|ZP_04320675.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus ATCC 10876] gi|228589759|gb|EEK47637.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus ATCC 10876] gi|228601762|gb|EEK59260.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus 172560W] gi|228700609|gb|EEL53148.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus Rock4-2] gi|228710194|gb|EEL62172.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus F65185] gi|228803961|gb|EEM50585.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 629 Score = 549 bits (1415), Expect = e-154, Method: Compositional matrix adjust. Identities = 285/622 (45%), Positives = 396/622 (63%), Gaps = 13/622 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E+ + +V Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEEGVCKGVVTQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKEEVVLGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G K+G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEVGRKIGLIKEERYERFTNKKLQIEQEKERLSSIIIK 486 Query: 485 S--------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 +N+ + + +DG A + L P+ + +++ + P + S V E++ Sbjct: 487 PRPEVQELIRNIGGSEL---KDGI--RASDLLRRPEMTYEHIHLLVPSEVELSDEVKEQV 541 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y Y + + + + +K E + IP D DY ++ ++++E ++KL ++P ++ QAS Sbjct: 542 EIQIKYEGYIEKSLQQVERMKKMENKKIPVDIDYDAISSIASEARQKLKDVRPLSMGQAS 601 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+ PA +++LL+YI++ + Sbjct: 602 RISGVNPADISILLVYIEQGKI 623 >gi|297621984|ref|YP_003710121.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Waddlia chondrophila WSU 86-1044] gi|297377285|gb|ADI39115.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Waddlia chondrophila WSU 86-1044] Length = 613 Score = 549 bits (1415), Expect = e-154, Method: Compositional matrix adjust. Identities = 284/613 (46%), Positives = 394/613 (64%), Gaps = 17/613 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAGCEAA +A++GA T L+T TIG MSCNPA+GG+GKGH+VREIDAL Sbjct: 8 YDVIVMGGGHAGCEAALASARMGAKTLLLTMNLDTIGKMSCNPAVGGIGKGHMVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+V D GIQ+R+LN KGPAV PR QAD+ Y+ ++ + QENL++ QG V Sbjct: 68 GGEMGKVIDCTGIQYRMLNATKGPAVWAPRAQADKAAYQFEIKHRLEKQENLEIHQGTVE 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + ++ TVV+++GTF+RG++HIG+ GR GD PS L Sbjct: 128 EIFVENDTVQGVATKEGIYFTAPTVVISSGTFMRGLLHIGERNFSGGRAGDQPSVGLSGC 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGITR 244 K F RLKTGTP R++ ++I TE+Q +E I FSF + K Q+ C IT Sbjct: 188 LKKLGFHLDRLKTGTPPRINKRSINLSLTEEQPGEEG-IRFSFDDEGKRKLPQVSCYITY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ET +II++NI S +YSG I+ GPRYCPSIEDK+VRF ++ HQ+FLEPEGL T+ Sbjct: 247 TTQETKQIILDNIHRSPLYSGKIQGVGPRYCPSIEDKVVRFSDKERHQLFLEPEGLQTEE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y NGIS++LP ++Q+ FI++IP L I RP YAIEYDY+ ++ P+LE+KK+ GLF Sbjct: 307 IYVNGISSSLPLDVQYAFIKSIPALRNAEITRPAYAIEYDYVTSGQIKPSLESKKVEGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEAAAQGL+AGIN+A K + + R++SYIGVMIDDL +KG+ EPY Sbjct: 367 LAGQINGTTGYEEAAAQGLLAGINAASKVAGREPLILKRSESYIGVMIDDLITKGLDEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAE+R+ LR DNAD RL G G I ++R + LK+ + Sbjct: 427 RMFTSRAEHRLLLRQDNADLRLRKYGYAYGLIDQKRWETLC------------LKAETIE 474 Query: 485 SKNLSSTSISFKQ-DGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIE-RLQIESSY 542 + ++ +FKQ +GK + + L P+ + ++L P+A I ++++ Y Sbjct: 475 WE-MTRFEKTFKQVNGKGFSLAQLLRRPEMTYESLLETYPEAVVDHGEEINFQIELNLKY 533 Query: 543 AAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMT 602 + Y RQ E + I E +P+ FD++ + L NE K+KL P L QAS+I G++ Sbjct: 534 SGYISRQNTEIERISQVENLRVPEHFDFNQVSGLRNEAKQKLCRHNPLTLGQASRISGVS 593 Query: 603 PAALNLLLIYIKK 615 PA +++L++ + K Sbjct: 594 PADISVLIVELTK 606 >gi|161523273|ref|YP_001578285.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia multivorans ATCC 17616] gi|189351954|ref|YP_001947582.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia multivorans ATCC 17616] gi|238687049|sp|A9AJF1|MNMG_BURM1 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|160340702|gb|ABX13788.1| glucose inhibited division protein A [Burkholderia multivorans ATCC 17616] gi|189335976|dbj|BAG45046.1| glucose inhibited division protein A [Burkholderia multivorans ATCC 17616] Length = 656 Score = 549 bits (1415), Expect = e-154, Method: Compositional matrix adjust. Identities = 290/625 (46%), Positives = 389/625 (62%), Gaps = 15/625 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D AGIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q V Sbjct: 67 GGAMAAATDEAGIQFRILNSSKGPAVRATRAQADRILYKAAIRRRLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 127 DLMVEGDCVVGAVTQIGIRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQIECGIT 243 + GRLKTGTP R+DG+TI + K E+Q D IP FSF+ + +Q+ C +T Sbjct: 187 LKELKLPQGRLKTGTPPRIDGRTIDFSKLEEQPGDLDPIPVFSFLGRAEQHPQQLPCWVT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPEGL T+ Sbjct: 247 HTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPEGLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP ++Q + + ++ GLE+ +I+RPGYAIEYDY +P+ L +LETK I+GL Sbjct: 307 EFYPNGISTSLPFDVQLELVHSMRGLEQAHILRPGYAIEYDYFDPRALKASLETKAINGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+ R + D C R +Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGVNAGRYVQEKDAWCPRRDQAYLGVLVDDLVTRGVAEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F + + LK+ + Sbjct: 427 YRMFTSRAEYRLSLREDNADMRLTEIGRELGLVDDVRWDAFCRKRDAVSRETERLKTTWV 486 Query: 484 TSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----CPDARKFS------S 530 T K L +T++ K + E L P + + C A + + Sbjct: 487 TPKTLPPEEATALLGKPIDHEYSLAELLRRPGVDYDGVCGLKGGECGPAEPLADDPVLLA 546 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 + E+++I Y Y RQ E + E +P DY + LS E+ +KL+ +P Sbjct: 547 QIKEQVEIGIKYQGYIERQATEIERNDANENTRLPDGIDYREVRGLSFEVSQKLNQFRPE 606 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 + QAS+I G+TPAA++LL++++K+ Sbjct: 607 TIGQASRISGVTPAAISLLMVHLKR 631 >gi|160872528|ref|ZP_02062660.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rickettsiella grylli] gi|159121327|gb|EDP46665.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rickettsiella grylli] Length = 621 Score = 549 bits (1415), Expect = e-154, Method: Compositional matrix adjust. Identities = 293/618 (47%), Positives = 398/618 (64%), Gaps = 11/618 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVI++GGGHAG EAA AA++GAST L+TH T+G +SCNP+IGG+GK HLV+E+DAL Sbjct: 7 YDVIIVGGGHAGTEAALAAARVGASTLLLTHNIETLGQLSCNPSIGGIGKSHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+M + AD AGIQ+R LN KGPAVR R Q DR LY+ A++ + +Q NL + Q V Sbjct: 67 GGIMAQAADLAGIQWRTLNASKGPAVRATRAQMDRNLYKQAIRNALENQANLFIFQQSVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + + I +V Q +VVLT GTFL G IHIG + GR G+ +N+L Sbjct: 127 NIILQSDRIVGVVTQMGLQFYAQSVVLTAGTFLAGKIHIGLQQANGGRAGEPAANTLAEK 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGITR 244 + F RLKTGTP RLDG+TI + +Q +D L FS + + K Q C IT Sbjct: 187 LRQLPFRVKRLKTGTPPRLDGRTINYQVLVEQPSDTPLPVFSDLGNVKQHPEQRSCFITY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II + S +YSG I GPRYCPSIEDK+VRF +++ HQIFLEPEGL+T Sbjct: 247 TNETTHTIIRHGLDRSPLYSGLIAGVGPRYCPSIEDKVVRFADKSAHQIFLEPEGLDTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q+ I +I GLE+ +I RPGYAIEYD+ +P++LFP+LE++ I LF Sbjct: 307 IYPNGISTSLPFDVQYDLIHSIEGLEQAHITRPGYAIEYDFFDPRDLFPSLESRLIENLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ+NGTTGYEEAAAQGL+AG+N+A K+ + R+++Y+GV+IDDL ++G LEPY Sbjct: 367 CAGQVNGTTGYEEAAAQGLIAGLNAALKAQEKSMWYPRRSEAYMGVLIDDLITQGTLEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RL+ KLG I E R K+ + LK +++ Sbjct: 427 RMFTSRAEYRLLLREDNADLRLSEAAYKLGLIDESRWKKMDDKRSILEQEQQRLKQILIK 486 Query: 485 SKNLSSTSISFKQDGKTRTAY----EFLSYPDFSIQNLFSI---CPDARKFSSLVIERLQ 537 ST+I Q G+T T + E L+ P+ + +L +I P + +++ Sbjct: 487 PHTPLSTAIE-AQLGQTITRHYRLSELLTRPELNYSHLMNIEGLGPGV--MDDAISKQID 543 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I++ Y Y RQ E + E +P DY+++ LSNE++EKL +P L QAS+ Sbjct: 544 IQAKYQGYIDRQCAEIQRQSRYENITLPLHLDYNAVKGLSNEVREKLIQCRPLTLGQASR 603 Query: 598 IEGMTPAALNLLLIYIKK 615 I G+TPAA++LLL++IKK Sbjct: 604 IPGITPAAISLLLVHIKK 621 >gi|254282249|ref|ZP_04957217.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [gamma proteobacterium NOR51-B] gi|219678452|gb|EED34801.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [gamma proteobacterium NOR51-B] Length = 632 Score = 549 bits (1414), Expect = e-154, Method: Compositional matrix adjust. Identities = 284/617 (46%), Positives = 394/617 (63%), Gaps = 5/617 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DVIVIGGGHAG EAA +A+ GAST L+TH T+G MSCNPAIGG+GK HLVRE+D Sbjct: 5 QQFDVIVIGGGHAGTEAALASARSGASTLLLTHSVDTLGQMSCNPAIGGIGKSHLVREVD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M + DAAGIQFRVLN +KGPAVR R QADR LYR A++ ++L+Q+NL V Q Sbjct: 65 ALGGAMAKATDAAGIQFRVLNARKGPAVRATRAQADRVLYRNAIREQLLNQQNLLVFQDS 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E ++ V + VVLT GTFLRG IH+G GRMGD S L Sbjct: 125 VEDVIIEGTRVAGAVTRTGLRFLSRAVVLTAGTFLRGKIHVGLENSEGGRMGDPASVGLA 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGI 242 + + T RLKTGTP R+D +++ + E Q+ DE S + + + Q C I Sbjct: 185 DRLRELCPRTDRLKTGTPPRIDARSVDFSVMETQWGDEPRPVMSVLGHRDQHPEQRCCWI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T+TN TH II + S ++SG I+ GPRYCPSIEDKI RF +++ HQ+F+EPEGL T Sbjct: 245 TKTNERTHDIIRGALDRSPLFSGVIEGTGPRYCPSIEDKIHRFSDKSSHQLFVEPEGLTT 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNGIST+LP + Q +++I G E+ +I RPGYAIEYDY +P++L +LET+ + G Sbjct: 305 TELYPNGISTSLPFDTQLALVQSIAGFERAHITRPGYAIEYDYFDPRDLKHSLETRGVQG 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AG+N+AR++ R ++YIGV++DDL + G LE Sbjct: 365 LFFAGQINGTTGYEEAAAQGLLAGLNAARQTRDQVAWEPRRDEAYIGVLVDDLVTHGTLE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLTP G +G + + + + F++ + + Sbjct: 425 PYRMFTSRAEYRLLLREDNADLRLTPAGRSMGLVLDPQWQHFSQKREAIEQETERFNTTF 484 Query: 483 LTSKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + ++ ++ K D Y + L P+ ++ ++ +A + ++ + + Sbjct: 485 IQPNSPAALTLQSKIDKPLSREYSLSDLLRRPELGYGDVAALAGNAVDDEQVALQ-VATQ 543 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 YA Y RQ E ++ E IP+D DY+++ LSNE+K+KL +P ++ +AS+I Sbjct: 544 IKYAGYITRQQEEIDRLQRLESTPIPEDMDYATVSGLSNEIKQKLEAARPTSIARASRIA 603 Query: 600 GMTPAALNLLLIYIKKN 616 G+TPAAL+LL I+IKK+ Sbjct: 604 GITPAALSLLAIHIKKH 620 >gi|187918052|ref|YP_001883615.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Borrelia hermsii DAH] gi|119860900|gb|AAX16695.1| putative tRNA (5-carboxymethylaminomethyl-2-thiouridylate) synthase subunit GidA [Borrelia hermsii DAH] Length = 626 Score = 549 bits (1414), Expect = e-154, Method: Compositional matrix adjust. Identities = 288/624 (46%), Positives = 406/624 (65%), Gaps = 9/624 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 I+ +D IVIGGGHAG EA+ A+L T LIT TIG +SCNPAIGGL KG++VRE Sbjct: 5 IDMDFDAIVIGGGHAGIEASLALARLNFKTLLITQNLDTIGKLSCNPAIGGLAKGNMVRE 64 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G MG + D + IQFR+LN +GPAV+ PR QAD+ +Y++ + + Q+NLD+ Q Sbjct: 65 IDALGGEMGCLIDFSMIQFRILNKSRGPAVQAPRAQADKLVYQVKAKETLERQDNLDLFQ 124 Query: 122 GEVAGF--NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 V+ F N+ +N I ++ + + VVLTTGTFLRG I IG+ + GR+ + + Sbjct: 125 DTVSDFLLNSMRNKIEGVITERGNKFTSRVVVLTTGTFLRGKIFIGEYRACMGRISEPAA 184 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIE 239 L ++ FD GRLKTGTPAR+ K+I + KTE QF D +IPFSF KI Q+ Sbjct: 185 CGLEKILLELGFDMGRLKTGTPARVHRKSINFAKTEIQFGDSDIIPFSFSNTKIDKAQLS 244 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH II +N+ S +YSG+I GPRYCPSIEDKIV+F +++ HQIF+EPEG Sbjct: 245 CYITYTNKKTHEIISDNMHLSPLYSGEIVGNGPRYCPSIEDKIVKFKDKDKHQIFIEPEG 304 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L+T+ +Y NG+S++LPE+IQ + I +I GLE I RPGYA+EYDYINP EL+ +LETK+ Sbjct: 305 LSTEEMYLNGLSSSLPEDIQKRLINSIDGLENAVITRPGYAVEYDYINPIELYASLETKR 364 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF+AGQ NG++GYEEAAAQG++AGIN+A + D + RT SYIGV+IDDL +KG Sbjct: 365 IKGLFVAGQTNGSSGYEEAAAQGIMAGINAALRLQGKDPMILPRTSSYIGVLIDDLVTKG 424 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAE+R++LR D +D RL G ++G + E + R+ ++ ++ LL+ Sbjct: 425 TKEPYRMFTSRAEHRLNLRHDTSDKRLIRWGYEVGLVSEEKYSRYFCKEKQVEEIKELLR 484 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 L K S+ + + + Y + P ++ +L +I P S +++E+++++ Sbjct: 485 QRRLKEKEASTLQL---KKHINKDFYHIIKDPYVNLSDLLNIDPKLNA-SKVILEQVELD 540 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ +++ E +P DF+Y + LS E KEK + ++P NL QAS+I Sbjct: 541 IKYEGYINRQRDLIRKMNNLELIKLPLDFNY-EIEGLSREAKEKFARIQPANLAQASRIS 599 Query: 600 GMTPAALNLLLIYIK--KNTVKLN 621 G+ + +LLI+ KN V L+ Sbjct: 600 GVRNTDIQVLLIHFSNPKNKVVLD 623 >gi|323144403|ref|ZP_08079011.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Succinatimonas hippei YIT 12066] gi|322415856|gb|EFY06582.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Succinatimonas hippei YIT 12066] Length = 633 Score = 549 bits (1414), Expect = e-154, Method: Compositional matrix adjust. Identities = 293/618 (47%), Positives = 387/618 (62%), Gaps = 5/618 (0%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 R +DVIV+G GHAG EAA +A++G T L+TH TIG MSCNPA GG+GKGHL+REI Sbjct: 9 QRIFDVIVVGAGHAGIEAAGASARMGCKTLLLTHNIETIGEMSCNPAFGGIGKGHLLREI 68 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DA+ G+ + D AGIQFR LN KGPAVR R Q DR LY+ +++ + NL + Q Sbjct: 69 DAMGGICPKAIDRAGIQFRTLNSSKGPAVRATRAQTDRHLYKEVIRKTLTDYPNLTIFQQ 128 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 + +S + R + VV+ +GTFL G+IHIG GR GD S L Sbjct: 129 PCTKLIFDGETLSGVDTAAGIQFRANAVVICSGTFLNGLIHIGLNHYQGGRAGDPASIGL 188 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECG 241 + + GRLKTGTPAR+ +I + K +KQ + FSFM + + Q+ C Sbjct: 189 AENLKELGLKVGRLKTGTPARIVSSSIDYSKMQKQDPEYPQPVFSFMDEADVHPTQVPCY 248 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 ITRTN TH II + S +YSG I S GPRYCPSIEDK+VR+ R HQIF+EPEGL Sbjct: 249 ITRTNEVTHEIIRSGLDRSPLYSGVIHSVGPRYCPSIEDKVVRYPNRTSHQIFIEPEGLT 308 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 + +VYPNGIST+LP +IQ +FI +I GLE I RPGYAIEYD+ +P+EL ++++KKI Sbjct: 309 SPLVYPNGISTSLPYDIQEKFIHSIEGLENAVIARPGYAIEYDFYDPRELSVSMQSKKIK 368 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLFLAGQINGTTGYEEAAAQGL+AGIN+A SR +YIGVM+DDL + G Sbjct: 369 GLFLAGQINGTTGYEEAAAQGLLAGINAALFIKGKKPWFPSRNQAYIGVMMDDLCTLGTK 428 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+ LR DNAD RLTP+ LG I R F K + E ++ LKS Sbjct: 429 EPYRMFTSRAEYRLMLREDNADLRLTPVAYDLGLIDGERYSAFEKKVNEIEKEKTRLKST 488 Query: 482 VL--TSKNLSSTSISFKQD-GKTRTAYEFLSYPDFSIQNLFSICP-DARKFSSLVIERLQ 537 ++ +S+ S K K + E L P+ ++ NL C D + E+++ Sbjct: 489 LIKPSSEEAKELSKVLKTPLSKEQKLEEILRRPEANLDNLLKACKLDPIVSTEQAREQVE 548 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ Y Y +M E K+ + EK L+P +FDY ++ ALSNE+ +KL+ KP L AS+ Sbjct: 549 IQIRYQGYLEHEMEEIKKREQNEKTLLPLNFDYKNISALSNEVAQKLNEYKPETLGMASR 608 Query: 598 IEGMTPAALNLLLIYIKK 615 I G+TPAA+++L++++KK Sbjct: 609 ISGVTPAAISILMVHLKK 626 >gi|120608762|ref|YP_968440.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Acidovorax citrulli AAC00-1] gi|166221316|sp|A1TI78|MNMG_ACIAC RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|120587226|gb|ABM30666.1| glucose inhibited division protein A [Acidovorax citrulli AAC00-1] Length = 655 Score = 549 bits (1414), Expect = e-154, Method: Compositional matrix adjust. Identities = 293/641 (45%), Positives = 397/641 (61%), Gaps = 27/641 (4%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DVIV+GGGHAG EAA AA++G+ T L+TH T+G MSCNP+IGG+GKGHLV+E+D Sbjct: 5 QEFDVIVVGGGHAGTEAALAAARMGSRTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D GIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q Sbjct: 65 ALGGAMALATDEGGIQFRILNSSKGPAVRATRAQADRILYKAAIRRMLENQPNLWLFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + + + Q R TVVLT GTFL G IH+G AGR GD P+ SL Sbjct: 125 VDDLMVEGDRVVGAITQVGIRFRARTVVLTAGTFLDGKIHVGLNNYSAGRAGDPPAVSLS 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFAD-------ERLIP-FSFM-TDKIT 234 + GRLKTGTP R+DG++I + + E+Q D E +P FSFM + + Sbjct: 185 ARLKELQLPQGRLKTGTPPRIDGRSIDFSQCEEQPGDGMPGGVNEGTLPVFSFMGSTAMH 244 Query: 235 NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 RQ+ C IT TN TH II S +++G I+ GPRYCPS+EDKI RF +++ HQIF Sbjct: 245 PRQVPCWITHTNERTHEIIRSGFDRSPMFTGKIEGVGPRYCPSVEDKINRFADKDSHQIF 304 Query: 295 LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT 354 LEPEGL T YPNGIST+LP ++Q+ +R++ GLE +I+RPGYAIEYDY +P+ L Sbjct: 305 LEPEGLTTHEFYPNGISTSLPFDVQYDLVRSMRGLENAHILRPGYAIEYDYFDPRSLKSN 364 Query: 355 LETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDD 414 ET++I GLF AGQINGTTGYEEAAAQGL AGIN+A + R ++Y+GV+++D Sbjct: 365 FETRQIQGLFFAGQINGTTGYEEAAAQGLFAGINAALQCRGESAWLPRRDEAYLGVLVND 424 Query: 415 LTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFL 474 L +KGV EPYRMFTSRAE+R+ LR DNAD RLT G ++G + + R F++ Sbjct: 425 LITKGVTEPYRMFTSRAEFRLQLREDNADMRLTEAGRRMGLVDDARWDAFSRKRDAVARE 484 Query: 475 RSLLKSLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL 531 LKS + +NL S + K ++ L PD + L + D K++S Sbjct: 485 TERLKSTWVNPRNLPAEESARVLGKSIEHEYNLFDLLRRPDVTYDALTGM--DGGKYAST 542 Query: 532 -------------VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSN 578 VIE+++I + YA Y RQ E + + E +P++ DY + ALS Sbjct: 543 AVSRETLGELSAPVIEQVEIAAKYAGYIDRQKDEVQRAFYYENLQLPQELDYMQVAALSI 602 Query: 579 ELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 E+++KL +P L QAS+I G+TPAA++LLL+++KK + Sbjct: 603 EVRQKLQKHRPETLGQASRISGVTPAAVSLLLVHLKKGGFR 643 >gi|299531163|ref|ZP_07044575.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Comamonas testosteroni S44] gi|298720866|gb|EFI61811.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Comamonas testosteroni S44] Length = 654 Score = 549 bits (1414), Expect = e-154, Method: Compositional matrix adjust. Identities = 293/639 (45%), Positives = 398/639 (62%), Gaps = 23/639 (3%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DVIV+GGGHAG EAA AA++G+ T L+TH T+G MSCNP+IGG+GKGHLV+E+D Sbjct: 5 QEFDVIVVGGGHAGTEAALAAARMGSKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 65 ALGGAMALATDKGGIQFRILNSSKGPAVRATRAQADRILYKAAIREMLENQPNLWLFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + + V Q R TVVLT GTFL G IH+G AGR GD P+ SL Sbjct: 125 VDDLMVEGDRVVGAVTQVGLKFRSRTVVLTAGTFLDGKIHVGLNNYAAGRAGDPPAVSLS 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFAD-------ERLIP-FSFMTDKITN 235 + GRLKTGTP R+DG++I + + E+Q D E +P FSFM ++ + Sbjct: 185 ARLKELKLPQGRLKTGTPPRIDGRSIDFSQCEEQPGDGMPGGVNEGEVPVFSFMGNRAMH 244 Query: 236 -RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 RQ+ C IT TN TH II S +++G I+ GPRYCPS+EDKI RF ++ HQIF Sbjct: 245 PRQMPCWITHTNARTHEIIRSGFDRSPMFTGKIEGVGPRYCPSVEDKINRFADKESHQIF 304 Query: 295 LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT 354 LEPEGL T YPNGIST+LP +IQ++ +R++ GLE +I+RPGYAIEYDY +P+ L + Sbjct: 305 LEPEGLTTHEFYPNGISTSLPFDIQYELVRSMKGLENAHILRPGYAIEYDYFDPRSLKSS 364 Query: 355 LETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDD 414 ETK+I GLF AGQINGTTGYEEAAAQGL AG+N+A + R ++Y+GV++DD Sbjct: 365 FETKQIQGLFFAGQINGTTGYEEAAAQGLFAGLNAALQCRGEGPWMPRRDEAYLGVLVDD 424 Query: 415 LTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFL 474 L +KGV EPYRMFTSRAE+R+ LR DNAD RLT G ++G + + R F++ + Sbjct: 425 LITKGVTEPYRMFTSRAEFRLQLREDNADMRLTEAGRQMGLVDDARWDSFSRKRDAVSRE 484 Query: 475 RSLLKSLVLTSKNLS---STSISFKQDGKTRTAYEFLSYPDFSIQNLFSI------CPDA 525 LKS + + ++ S + K + ++ L P L + C D Sbjct: 485 TERLKSTWVNPRVVAPEESERVLGKAMEREYNLFDLLRRPGVDYDKLMGMNQGKYACADV 544 Query: 526 R-----KFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNEL 580 + + S VIE+++I + Y+ Y RQ E + E+ +P DFDY + ALS E+ Sbjct: 545 QPEALGELSVPVIEQVEIAAKYSGYIDRQKDEVERAAHFERLRLPLDFDYMQVAALSFEV 604 Query: 581 KEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 ++KL +P L QAS+I G+TPAA++LL++++KK K Sbjct: 605 RQKLQKHRPETLGQASRISGVTPAAISLLMVHLKKGGFK 643 >gi|257424193|ref|ZP_05600622.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus 55/2053] gi|257426870|ref|ZP_05603272.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus 65-1322] gi|257429506|ref|ZP_05605893.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Staphylococcus aureus subsp. aureus 68-397] gi|257432153|ref|ZP_05608516.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Staphylococcus aureus subsp. aureus E1410] gi|257435114|ref|ZP_05611165.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus M876] gi|282912911|ref|ZP_06320703.1| glucose inhibited division protein A [Staphylococcus aureus subsp. aureus M899] gi|282922539|ref|ZP_06330229.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus C101] gi|293497964|ref|ZP_06665818.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus 58-424] gi|293511554|ref|ZP_06670248.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus M809] gi|293550163|ref|ZP_06672835.1| glucose inhibited division protein A [Staphylococcus aureus subsp. aureus M1015] gi|257273211|gb|EEV05313.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus 55/2053] gi|257276501|gb|EEV07952.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus 65-1322] gi|257279987|gb|EEV10574.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Staphylococcus aureus subsp. aureus 68-397] gi|257283032|gb|EEV13164.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Staphylococcus aureus subsp. aureus E1410] gi|257285710|gb|EEV15826.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus M876] gi|282314760|gb|EFB45146.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus C101] gi|282323011|gb|EFB53330.1| glucose inhibited division protein A [Staphylococcus aureus subsp. aureus M899] gi|290919210|gb|EFD96286.1| glucose inhibited division protein A [Staphylococcus aureus subsp. aureus M1015] gi|291096895|gb|EFE27153.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus 58-424] gi|291465512|gb|EFF08044.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus M809] Length = 625 Score = 549 bits (1414), Expect = e-154, Method: Compositional matrix adjust. Identities = 286/621 (46%), Positives = 397/621 (63%), Gaps = 7/621 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VREID Sbjct: 3 QEYDVIVIGAGHAGVEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVREID 62 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R I +ENL ++QG Sbjct: 63 ALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEENLHIMQGM 122 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E N + + + V++TTGTFLRG I +G +K +G PS +L Sbjct: 123 VDELIIEDNEVKGVRTNIGTEYLSKAVIITTGTFLRGEIILGNMKYSSGPNHQLPSITLS 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 ++ + FD R KTGTP R++ KTI + KTE Q D+ FSF T + Q+ C +T Sbjct: 183 DNLRELGFDIVRFKTGTPPRVNSKTIDYSKTEIQPGDDVGRAFSFETTEYILDQLPCWLT 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN ETH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG NT+ Sbjct: 243 YTNAETHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRNTN 302 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETK I L Sbjct: 303 EVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKMIKNL 362 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGT+GYEEAA QGL+AGIN+A K SR+D+YIGV+IDDL +KG EP Sbjct: 363 YTAGQINGTSGYEEAAGQGLMAGINAAGKVLNTGEKILSRSDAYIGVLIDDLVTKGTNEP 422 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G +LG I E R RF + Q+ + L + + Sbjct: 423 YRLLTSRAEYRLLLRHDNADLRLTDMGYELGMISEERYARFNEKRQQIDAEIKRLSDIRI 482 Query: 484 TSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 K T + +Q G +R A + L P+ + + I + + ++ V E+++I Sbjct: 483 --KPNEHTQVIIEQHGGSRLKDGILAIDLLRRPEMTYDIILEILEEEHQLNADVEEQVEI 540 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 ++ Y Y + + + +++K E++ IP+D DYS + +L+ E +EKLS +KP N+ QAS+I Sbjct: 541 QTKYEGYINKSLQQVEKVKRMEEKKIPEDLDYSKIDSLATEAREKLSEVKPLNIAQASRI 600 Query: 599 EGMTPAALNLLLIYIKKNTVK 619 G+ PA +++LLIY+++ ++ Sbjct: 601 SGVNPADISILLIYLEQGKLQ 621 >gi|332524941|ref|ZP_08401127.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rubrivivax benzoatilyticus JA2] gi|332108236|gb|EGJ09460.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rubrivivax benzoatilyticus JA2] Length = 650 Score = 549 bits (1414), Expect = e-154, Method: Compositional matrix adjust. Identities = 289/637 (45%), Positives = 397/637 (62%), Gaps = 21/637 (3%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 +++DVIV+GGGHAG EAA AA++G +T L+TH T+G MSCNP+IGG+GKGHLV+E+D Sbjct: 5 QAFDVIVVGGGHAGTEAALAAARMGCTTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q Sbjct: 65 ALGGAMAEATDESGIQFRILNGSKGPAVRATRAQADRVLYKAAIRRRLENQPNLWLFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 E + ++ ++ Q VVLT GTFL G +H+G AGR GD + +L Sbjct: 125 CDDLIVEGDRVTGVITQIGLRFNARAVVLTAGTFLDGRVHVGLENYRAGRAGDPAATTLS 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFM-TDKITNRQIECG 241 + GRLKTGTP R+DG++I + + E+Q D +P F F+ T ++ RQ+ C Sbjct: 185 ARLKELKLPQGRLKTGTPPRIDGRSIDFSRLEEQPGDLDPVPVFGFLGTPEMHPRQLPCW 244 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT TN TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEGL Sbjct: 245 ITHTNERTHEIIRSGFDRSPMFTGIIEGVGPRYCPSIEDKINRFADKSSHQIFLEPEGLT 304 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T YPNG+ST+LP ++Q IRT+PGLE +I+RPGYAIEYDY +P+EL P+ ET+ I Sbjct: 305 THEFYPNGVSTSLPFDVQLGAIRTMPGLENAHILRPGYAIEYDYFDPRELKPSFETQAIG 364 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQINGTTGYEEAAAQGL AG N+A ++ + R +Y+GV++DDL +KG+ Sbjct: 365 GLFFAGQINGTTGYEEAAAQGLFAGANAALQAQGREPWTPRRDQAYLGVLVDDLVTKGIT 424 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+ LR DNAD RLT IG +LG +G+ R F + + + LKS Sbjct: 425 EPYRMFTSRAEYRLQLREDNADLRLTAIGRELGLVGDARWDAFCRKRERLEREQQRLKST 484 Query: 482 VLTSKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSI-----CPDARKFSSL-- 531 + L++ Y + L P +++ PD +L Sbjct: 485 WVRPATLAAADAERFIGKALEHEYNLADLLRRPGVDFDAVWAAAAAAGVPDVVSRGTLQA 544 Query: 532 ---------VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKE 582 VIE+ +I YA Y +Q+ E + E+ +P++ DY+ + ALS E+++ Sbjct: 545 EYGAREADAVIEQAEIAIKYAGYIDKQVDEVQRAAHYEQMKLPEELDYAQVTALSFEVRQ 604 Query: 583 KLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 KL+ +P L QAS+I G+TPAA++LLL+++KK K Sbjct: 605 KLTRHRPETLGQASRISGVTPAAISLLLVHLKKGRFK 641 >gi|56461730|ref|YP_157011.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Idiomarina loihiensis L2TR] gi|81170548|sp|Q5QZI8|MNMG_IDILO RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|56180740|gb|AAV83462.1| NAD/FAD-utilizing enzyme apparently involved in cell division [Idiomarina loihiensis L2TR] Length = 631 Score = 549 bits (1414), Expect = e-154, Method: Compositional matrix adjust. Identities = 286/623 (45%), Positives = 392/623 (62%), Gaps = 13/623 (2%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 + +DVIV+GGGHAG EAA AA+LG T L+TH T+G MSCNPAIGG+GKGHLV+EI Sbjct: 6 QQHFDVIVVGGGHAGTEAALAAARLGVKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEI 65 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G+M + AD AGIQFR LN KGPAVR R QADR+LY+ A++ + +Q NL + Q Sbjct: 66 DALGGVMAKAADKAGIQFRTLNSSKGPAVRATRAQADRQLYKQAIRYALETQPNLSIFQQ 125 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 E + ++ +V Q TVVLT GTFL G IHIG GR GD PSN+L Sbjct: 126 GCDDLIVENDRVTGVVTQMGLKFTAKTVVLTVGTFLGGQIHIGLDNYQGGRAGDPPSNAL 185 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECG 241 RLKTGTP R+ ++ + ++Q D FS+M + + +QI C Sbjct: 186 AKRLRALPLRVERLKTGTPPRIASHSVDFSVMQEQPGDNPTPVFSYMGSRSDHPQQIPCY 245 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT TN TH II + S +YSG I+ GPRYCPSIEDKIVRF ++ HQIF+EPEGLN Sbjct: 246 ITHTNENTHEIIRSGLDRSPMYSGVIEGVGPRYCPSIEDKIVRFADKGSHQIFVEPEGLN 305 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T +YPNGIST+LP ++Q + +++I G E +I RPGYAIEYDY +P++L +LETK I+ Sbjct: 306 TFEIYPNGISTSLPFDVQQRLVQSIKGFENAHITRPGYAIEYDYFDPRDLKQSLETKVIN 365 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQINGTTGYEEA AQGL+AG+N+A ++ + R +Y+GV+IDDL++ G Sbjct: 366 GLFFAGQINGTTGYEEAGAQGLIAGLNAALQAQDKESWAPRRDQAYMGVLIDDLSTLGTQ 425 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+ LR DNAD RLT IG LG + + R F K ++ + LK+ Sbjct: 426 EPYRMFTSRAEYRLLLREDNADMRLTEIGRNLGLVDDERWAAFNKKMESVEQEKQRLKTT 485 Query: 482 VLTSKNLS--------STSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVI 533 + + S + ++ + G+ + Y D ++ + F+ + L Sbjct: 486 WVHKDHASVEQINALVKSPVTKEVSGEELLRRPEIHYKDLALTDFFAPGLE----DPLAA 541 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I+ YA Y RQ E + + E L+P FDY+ + LSNE+ KL+ +P + Sbjct: 542 EQVEIQIKYAGYITRQQEEIAKQQRHENTLLPSPFDYAKIKGLSNEVVAKLNDHQPETVG 601 Query: 594 QASKIEGMTPAALNLLLIYIKKN 616 +A++I G+TPAA+++LL+++KK Sbjct: 602 KAARISGITPAAVSMLLVHLKKQ 624 >gi|228942632|ref|ZP_04105164.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228975562|ref|ZP_04136114.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228982198|ref|ZP_04142487.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis Bt407] gi|228777550|gb|EEM25828.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis Bt407] gi|228784172|gb|EEM32199.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817058|gb|EEM63151.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326943281|gb|AEA19177.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus thuringiensis serovar chinensis CT-43] Length = 629 Score = 548 bits (1413), Expect = e-154, Method: Compositional matrix adjust. Identities = 286/622 (45%), Positives = 395/622 (63%), Gaps = 13/622 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E+ I +V Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEEGICKGVVTQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRSFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVVLGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G ++G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEVGREIGLIKEERYERFTNKKLQIEQEKERLSSIIIK 486 Query: 485 S--------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 +N+ + + +DG A + L P+ + +++ + P + S V E++ Sbjct: 487 PRPEVQELIRNIGGSEL---KDGI--RASDLLRRPEMTYEHIHLLVPSEVELSDEVTEQV 541 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS Sbjct: 542 EIQIKYEGYIEKSLQQVERMKKMESKKIPVDIDYDAISSLASEARQKLKDVRPLSMGQAS 601 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+ PA +++LL+YI++ + Sbjct: 602 RISGVNPADISILLVYIEQGKI 623 >gi|237814358|ref|YP_002898809.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei MSHR346] gi|237505862|gb|ACQ98180.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei MSHR346] Length = 657 Score = 548 bits (1413), Expect = e-154, Method: Compositional matrix adjust. Identities = 289/625 (46%), Positives = 391/625 (62%), Gaps = 15/625 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q V Sbjct: 67 GGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRVLYKQAIRRRLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IH+G GR GD + SL + Sbjct: 127 DLMVEGDRVVGAVTQVGVRFRARAVVLTAGTFLDGKIHVGLNHYTGGRAGDPAAVSLSSR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQIECGIT 243 + + GRLKTGTP R+DG+TI + K ++Q D IP FSF+ + +Q+ C +T Sbjct: 187 LKELNLPQGRLKTGTPPRIDGRTIDFSKLDEQPGDLDPIPVFSFLGRAEQHPQQLPCWVT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T+ Sbjct: 247 HTNERTHDIIRSGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP ++Q + ++ GLE+ +I+RPGYAIEYDY +P+ L +LETK I GL Sbjct: 307 EFYPNGISTSLPFDVQLALVHSMRGLEQAHILRPGYAIEYDYFDPRALKSSLETKAIGGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ R + + D C R +Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGINAGRYAQEKDAWCPRRDQAYLGVLVDDLVTRGVSEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLT IG +L + + R F + + L++ + Sbjct: 427 YRMFTSRAEYRLSLREDNADMRLTEIGRELSVVDDVRWDAFNRKRDAVSRETERLRTTWV 486 Query: 484 TSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----CPDARKFS------S 530 T K L +T++ K + E L P S + + C + + + Sbjct: 487 TPKTLPADEATALLGKPIDHEYSLAELLRRPGVSYDGVCGLRGGECGPSEPLAEDELLLA 546 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 + E+++I Y Y RQ E + E +P DY+ + LS E+ +KL+ +P Sbjct: 547 QIKEQIEIGIKYQGYIERQAGEIERNGANENTRLPDGIDYTEVRGLSFEVSQKLNQFRPE 606 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 + QAS+I GMTPAA++LL++++KK Sbjct: 607 TIGQASRISGMTPAAISLLMVHLKK 631 >gi|322800358|gb|EFZ21362.1| hypothetical protein SINV_03566 [Solenopsis invicta] Length = 849 Score = 548 bits (1413), Expect = e-154, Method: Compositional matrix adjust. Identities = 295/629 (46%), Positives = 409/629 (65%), Gaps = 15/629 (2%) Query: 1 MINRS-YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLV 59 +IN++ +DVIV+GGGHAG EA+A A ++GA T L+T K STIG MSCNP+ GG+GKGHL+ Sbjct: 220 LINKNKFDVIVVGGGHAGTEASAAAVRMGAKTLLVTQKKSTIGEMSCNPSFGGIGKGHLM 279 Query: 60 REIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDV 119 RE+DALDG+ R+ D +GI +RVLN +KGPAV G R Q DR LY+ +Q E+ + L + Sbjct: 280 REVDALDGVCCRICDISGIHYRVLNKRKGPAVWGLRAQIDRALYKKYLQAELFNMPGLHI 339 Query: 120 IQGEVAGFNTEKNIISS--IVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 + V E +S ++++D + I VV+TTGTFL+G I+IG K PAGR+ D Sbjct: 340 YESSVEDLILENEPLSCQGVILKDGTKIFGDAVVITTGTFLKGQINIGLEKRPAGRLNDE 399 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--- 234 PS L N+ + F GRLKTGTP RL+ +I + K +K DE IPFSFM+D + Sbjct: 400 PSIGLANTLERLGFQIGRLKTGTPPRLEKDSIDFTKCKKSLPDESPIPFSFMSDNVWLPP 459 Query: 235 NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 ++Q+ +T TN + +II +N+ + + +I GPRYCPSIE KI+RF HQI+ Sbjct: 460 DKQVLTYLTFTNEKVAQIIRDNMHCNLHVTEEIS--GPRYCPSIESKILRFKALQ-HQIW 516 Query: 295 LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT 354 LEPEGL++ ++YP+G+S LPE+ Q + ++ IPGLE +IRPGY +EYDY++P+EL Sbjct: 517 LEPEGLDSPLIYPSGLSCTLPEDKQVELVKCIPGLENACLIRPGYGVEYDYVDPRELTTQ 576 Query: 355 LETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDD 414 LETKKI LFLAGQINGTTGYEEAAAQG+VAG+N+A K K + SRT+ YIGV+IDD Sbjct: 577 LETKKIPRLFLAGQINGTTGYEEAAAQGIVAGVNAAAKVFKKPPLLISRTEGYIGVLIDD 636 Query: 415 LTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFL 474 LT++G EPYRMFTSR+E+R+SLRPDNAD RLT G +GC+ R +R K ++ Sbjct: 637 LTTEGTTEPYRMFTSRSEFRVSLRPDNADQRLTEKGYTIGCVSRERLERTKKVFRKMQEA 696 Query: 475 RSLLKSLVLT-SKNLSSTSISFKQDGKTRTAYEFLSY--PDFSIQNLFSICPDARKF--S 529 +LKS V T +K +I + ++A+E LS + + L + PD + Sbjct: 697 IQILKSDVRTCTKWRQLLNIKKSKAVDHKSAFEMLSLTTEEVTFARLAKLLPDLQYLDRD 756 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPA-LSNELKEKLSILK 588 + R++IE+ Y Q + +IK E+ IP D DY+S LSNE +EKLS Sbjct: 757 PNLTRRIEIEAKYGYIVAEQQDQVNDIKRNEQMTIPDDIDYNSPKLNLSNEDREKLSKYL 816 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIKKNT 617 P + A+KI G+TP+A+ LL Y+K ++ Sbjct: 817 PRTIAAANKISGVTPSAILRLLFYVKHHS 845 >gi|120600846|ref|YP_965420.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shewanella sp. W3-18-1] gi|146295047|ref|YP_001185471.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shewanella putrefaciens CN-32] gi|166200614|sp|A4YCI9|MNMG_SHEPC RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|166200616|sp|A1RQC1|MNMG_SHESW RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|120560939|gb|ABM26866.1| glucose inhibited division protein A [Shewanella sp. W3-18-1] gi|145566737|gb|ABP77672.1| glucose inhibited division protein A [Shewanella putrefaciens CN-32] Length = 629 Score = 548 bits (1413), Expect = e-154, Method: Compositional matrix adjust. Identities = 295/615 (47%), Positives = 384/615 (62%), Gaps = 5/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA++G+ T L+TH T+G MSCNPAIGG+GKGHLV+EIDAL Sbjct: 7 FDVIVVGGGHAGTEAALAAARMGSKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D AGIQFR LN KGPAVR R QADR LYR +Q + +Q NL + Q V Sbjct: 67 GGAMAIATDYAGIQFRTLNSSKGPAVRATRAQADRALYRQKIQNILQNQANLRIFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + +V Q +VLTTGTFL G IHIG GR GD P+ +L N Sbjct: 127 DLIVENDRVVGVVTQMGLAFESPAIVLTTGTFLSGKIHIGLENYSGGRAGDPPAIALANR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D TI + + +Q D L SFM D + +QI C IT Sbjct: 187 LRELPIRVGRLKTGTPPRIDANTIDFSQMAEQKGDSPLPVMSFMGDVSHHPKQISCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH II + S +YSG I+ GPRYCPSIEDKI RF +++ HQIF+EPEGLNT Sbjct: 247 TNEKTHEIIRGGLDRSPMYSGVIEGIGPRYCPSIEDKIHRFSDKSSHQIFIEPEGLNTTE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q +R+I G+E I+RPGYAIEYDY +P++L +LETK I+GLF Sbjct: 307 IYPNGISTSLPFDVQLNLVRSIKGMENAEIVRPGYAIEYDYFDPRDLKNSLETKTINGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N++ + D C R ++Y+GV++DDL++ G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGMNASLQVQGKDAWCPRRDEAYLGVLVDDLSTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNF-LRSLLKSLVL 483 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F++ ++ L+ L V Sbjct: 427 RMFTSRAEYRLLLREDNADIRLTAKGRELGLVDDIRWAAFSEKLESIELELQRLRAQWVH 486 Query: 484 TSKNLSSTSISFKQDGKTRTAY--EFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 + L +R A E L P+ L I L E++QI+ Sbjct: 487 PNSPLIHALNPHLNTPISREASFEELLRRPEMDYSKLMQIEGFGPGLEDPLAAEQVQIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y+ Y RQ E + E +P DY +P LSNE+ KL+ KP + QAS+I G Sbjct: 547 KYSGYIQRQQEEINKAVRNENTGLPLHLDYKEVPGLSNEVIAKLNSHKPETIGQASRISG 606 Query: 601 MTPAALNLLLIYIKK 615 +TPAA+++LL+++KK Sbjct: 607 VTPAAISILLVHLKK 621 >gi|307718006|ref|YP_003873538.1| glucose-inhibited division protein A [Spirochaeta thermophila DSM 6192] gi|306531731|gb|ADN01265.1| glucose-inhibited division protein A [Spirochaeta thermophila DSM 6192] Length = 619 Score = 548 bits (1413), Expect = e-154, Method: Compositional matrix adjust. Identities = 283/614 (46%), Positives = 389/614 (63%), Gaps = 6/614 (0%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALD 66 DVIVIGGGHAG EAA A++LG ST LIT TIG MSCNPA+GGL KG++VRE+DAL Sbjct: 4 DVIVIGGGHAGIEAALAASRLGCSTVLITQLLDTIGKMSCNPAVGGLAKGNIVREVDALG 63 Query: 67 GLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAG 126 G MGR+ D IQFR+LN +GPAV+ PR QAD++ Y + + Q+ L + Q V Sbjct: 64 GEMGRLIDRTMIQFRMLNRSRGPAVQCPRAQADKQAYAQRAKWSLEQQKGLFLFQDTVVD 123 Query: 127 FNTEK--NIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 F ++ I +V + VVLTTGTF+ I IG+ + P GR+G+ + L Sbjct: 124 FVLDEAGREIRGVVTERGRRFHARKVVLTTGTFMEAKIFIGEYETPGGRLGEPAACGLGG 183 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F GRLKTGTPAR+ ++ + K ++Q DE +IPFSF D + RQ+ C IT Sbjct: 184 VLRRLGFTVGRLKTGTPARVLRSSLDFSKMQEQPGDEEIIPFSFSHDTLEVRQVPCYITF 243 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETHRII EN+ S +Y G I GPRYCPS+EDK+VRF +R+ HQ+F+EPEGL+T+ Sbjct: 244 TTPETHRIIRENLHRSPLYGGRIVGRGPRYCPSLEDKVVRFPDRDRHQVFVEPEGLSTEE 303 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y NGIS++LPEE+Q FI TIPGLE I+RPGYA+EYDY+ P +L+PTLETK+I GL+ Sbjct: 304 MYLNGISSSLPEEVQEAFIHTIPGLEHAVIMRPGYAVEYDYVEPTQLYPTLETKRIRGLY 363 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 +AGQ NGT+GYEEA QGLVAGIN+A + R ++YIGV+IDDL +KG EPY Sbjct: 364 IAGQTNGTSGYEEAGGQGLVAGINAALACRGEPPLVLGRDEAYIGVLIDDLVTKGTKEPY 423 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR++LR D AD RL ++G +R + I + ++ LL+ L Sbjct: 424 RMFTSRAEYRLALRHDTADIRLLEKAYRIGLQSREMFERLQEKIHVLDAIKELLRQRRLA 483 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + + + Y+ L P ++ +L + P+ K+ + +I+ Y Sbjct: 484 QEEAEQRRLPQLAPHVGKPLYQVLKDPRVTLDDLAFLVPELSKYPRPWVRTAEIDVKYEG 543 Query: 545 YTGR--QMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMT 602 Y R QM+E K K E+ R IP FDYS + LS+E +EKLS ++P +L QAS+I G+ Sbjct: 544 YLLREQQMVE-KFRKMEDMR-IPDHFDYSEVEGLSSEAREKLSTIRPLSLGQASRISGIR 601 Query: 603 PAALNLLLIYIKKN 616 + + +L++Y+ ++ Sbjct: 602 SSDIAVLMVYLSRS 615 >gi|317050325|ref|YP_004111441.1| glucose inhibited division protein A [Desulfurispirillum indicum S5] gi|316945409|gb|ADU64885.1| glucose inhibited division protein A [Desulfurispirillum indicum S5] Length = 630 Score = 548 bits (1413), Expect = e-154, Method: Compositional matrix adjust. Identities = 290/622 (46%), Positives = 395/622 (63%), Gaps = 11/622 (1%) Query: 1 MIN--RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHL 58 M+N R++DVIV+G GHAGCEAA AA++G STAL + TI MSCNPAIGG+ KGHL Sbjct: 1 MLNYTRTFDVIVVGAGHAGCEAALAAARMGCSTALFSINLDTIAQMSCNPAIGGVAKGHL 60 Query: 59 VREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLD 118 V+EIDAL G M DA GIQFR LN KGPAVR R QAD++LYR M++ + Q NL Sbjct: 61 VKEIDALGGEMALNIDATGIQFRTLNTSKGPAVRSSRAQADKQLYRKRMKQVLELQPNLH 120 Query: 119 VIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSP 178 + Q V G T+ +I+ ++ Q VVLT GTF+ G +HIG PAGR+G+ P Sbjct: 121 ITQDMVTGIFTQNGVIAGVISQIGVRYHARAVVLTAGTFMNGTVHIGFESFPAGRLGEPP 180 Query: 179 SNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQI 238 + L S + F+ GRLKTGTPAR++ +I + + E+Q D PFSFM I Q+ Sbjct: 181 ALGLSESLQEHGFELGRLKTGTPARVNRHSIDFSRMEEQPGDPDPRPFSFMNTHIRQSQV 240 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C I+ TN TH II NI+ SA+YSG I GPRYCPSIEDK+V+F +++ HQ FLEPE Sbjct: 241 PCWISWTNERTHEIIRRNIERSALYSGKITGIGPRYCPSIEDKVVKFPDKDRHQTFLEPE 300 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 G +T+ Y NG+ST+LP ++Q +F RTIPGLE+V ++RP YAIEYD+I P +L TLETK Sbjct: 301 GYDTNEFYINGMSTSLPVDVQMEFYRTIPGLERVELMRPAYAIEYDFIPPTQLCATLETK 360 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 + GLF AGQINGT+GYEEAAAQGL+AGIN+A +++ + + R YIGVM+DDL +K Sbjct: 361 PVRGLFHAGQINGTSGYEEAAAQGLLAGINAALRASGREPVTIGREQGYIGVMVDDLVTK 420 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYRMFTSRAE+R+ LR DNAD RLT +G ++G + + R +RF + L Sbjct: 421 GTREPYRMFTSRAEHRLVLREDNADLRLTELGRRVGLVSDERYRRFEIKRTMVEAEKKRL 480 Query: 479 KSLVLTSK---NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIER 535 ++L + N + + A L + ++L + + V E+ Sbjct: 481 QNLTVKPAPEVNQLLAELGTAVLAEPLRAAALLKRHEVHYKHLVQMGAGLAGLPADVREQ 540 Query: 536 LQIESSYAAYTGRQMIEAKEIKFE---EKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 ++I+ Y Y R E K I+ + ++ IP FDY S+ LS E++ KL ++P L Sbjct: 541 VEIQLQYEGYIQR---EEKFIQHQMKLDRVQIPASFDYESVSGLSREVRTKLLEIRPATL 597 Query: 593 LQASKIEGMTPAALNLLLIYIK 614 QA +I G+TPAA+++L I+++ Sbjct: 598 GQALRISGVTPAAVSVLSIHLE 619 >gi|21241151|ref|NP_640733.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Xanthomonas axonopodis pv. citri str. 306] gi|24636868|sp|Q8PQE8|MNMG_XANAC RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|21106455|gb|AAM35269.1| glucose inhibited division protein A [Xanthomonas axonopodis pv. citri str. 306] Length = 634 Score = 548 bits (1413), Expect = e-154, Method: Compositional matrix adjust. Identities = 289/625 (46%), Positives = 390/625 (62%), Gaps = 20/625 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAG EAA +A+ GA T L+TH T+G+MSCNPAIGG+GKGHLV+EIDAL Sbjct: 8 YDVIVIGGGHAGTEAALASARAGARTLLLTHNIETVGAMSCNPAIGGIGKGHLVKEIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M R AD AGIQ+R LN KGPAVR R QADR LYR A++ + +Q NL V Q V Sbjct: 68 GGAMARAADLAGIQWRTLNASKGPAVRATRCQADRNLYRTAIRCIVEAQPNLTVFQAAVD 127 Query: 126 GF-----NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 +E + + ++ Q + +VVLT GTFL G IH+G+ + AGRMGD P+ Sbjct: 128 DLIIHHGASEADSVRGVITQTGLRFQAPSVVLTAGTFLAGKIHVGQTQYAAGRMGDPPAT 187 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + F RLKTGTP R+DG+T+ + +Q D+ L SFM + RQ+ Sbjct: 188 TLAARLRERPFAIDRLKTGTPPRIDGRTLDYGVMAEQPGDDPLPVMSFMGQVSDHPRQVS 247 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT+T +TH II + S +YSG I+ GPRYCPSIEDK+VRF E+ HQIF+EPEG Sbjct: 248 CWITQTTEQTHEIIRNALHRSPLYSGQIEGIGPRYCPSIEDKVVRFAEKTSHQIFVEPEG 307 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L +YPNGIST+LP ++Q +R+I G +I RPGYAIEYD+ +P+ L +LETK Sbjct: 308 LEVAEIYPNGISTSLPFDVQLALVRSIHGFANAHITRPGYAIEYDFFDPRGLKASLETKA 367 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 + GLF AGQINGTTGYEEAAAQGL+AG+N+AR L R ++Y+GV++DDL + G Sbjct: 368 VGGLFFAGQINGTTGYEEAAAQGLLAGLNAARHVQGLPAWSPRRDEAYLGVLVDDLITHG 427 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +G +G + + R RFA + + L Sbjct: 428 TTEPYRMFTSRAEYRLQLREDNADARLTGVGRAMGLVDDARWARFAAKQEAVQRETARLS 487 Query: 480 SLVLTSKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLFSI------CPDARKFSS 530 +L T N ++ + + + P+ + L + DA+ Sbjct: 488 ALWATPGNALGREVADALGVTVSRETNVLDLIKRPELTYATLMRVPTLGPGVDDAQ---- 543 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 V E+++I YA Y RQ + + E IP FDY+S+ LS E+++KL ++P Sbjct: 544 -VAEQVEISVKYAGYLDRQRDDIARQQRHETTPIPDGFDYASVRGLSIEVQQKLERVRPQ 602 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 ++ QA +I GMTPAA++LLL+++++ Sbjct: 603 HIGQAQRIPGMTPAAISLLLVHLER 627 >gi|221214301|ref|ZP_03587273.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia multivorans CGD1] gi|221165956|gb|EED98430.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia multivorans CGD1] Length = 656 Score = 548 bits (1412), Expect = e-154, Method: Compositional matrix adjust. Identities = 290/625 (46%), Positives = 389/625 (62%), Gaps = 15/625 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D AGIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q V Sbjct: 67 GGAMAAATDEAGIQFRILNSSKGPAVRATRAQADRILYKAAIRRRLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 127 DLMVEGDRVVGAVTQIGIRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQIECGIT 243 + GRLKTGTP R+DG+TI + K E+Q D IP FSF+ + +Q+ C +T Sbjct: 187 LKELKLPQGRLKTGTPPRIDGRTIDFSKLEEQPGDLDPIPVFSFLGRAEQHPQQLPCWVT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPEGL T+ Sbjct: 247 HTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPEGLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP ++Q + + ++ GLE+ +I+RPGYAIEYDY +P+ L +LETK I+GL Sbjct: 307 EFYPNGISTSLPFDVQLELVHSMRGLEQAHILRPGYAIEYDYFDPRALKASLETKAINGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+ R + D C R +Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGVNAGRYVQEKDAWCPRRDQAYLGVLVDDLVTRGVAEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F + + LK+ + Sbjct: 427 YRMFTSRAEYRLSLREDNADMRLTEIGRELGLVDDVRWDAFCRKRDAVSRETERLKTTWV 486 Query: 484 TSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----CPDARKFS------S 530 T K L +T++ K + E L P + + C A + + Sbjct: 487 TPKTLPPEEATALLGKPIDHEYSLAELLRRPGVDYDGVCGLKGGDCGPAEPLADDPVLLA 546 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 + E+++I Y Y RQ E + E +P DY + LS E+ +KL+ +P Sbjct: 547 QIKEQVEIGIKYQGYIERQATEIERNDANENTRLPDGIDYREVRGLSFEVSQKLNQFRPE 606 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 + QAS+I G+TPAA++LL++++K+ Sbjct: 607 TIGQASRISGVTPAAISLLMVHLKR 631 >gi|187933395|ref|YP_001887733.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium botulinum B str. Eklund 17B] gi|187721548|gb|ACD22769.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium botulinum B str. Eklund 17B] Length = 626 Score = 548 bits (1412), Expect = e-154, Method: Compositional matrix adjust. Identities = 282/614 (45%), Positives = 397/614 (64%), Gaps = 9/614 (1%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALD 66 DV+V+G GHAGCEAA +A++G +T + T +I M CNP IGG KGHLVREIDAL Sbjct: 11 DVVVVGAGHAGCEAALASARMGLNTLICTINLDSIAMMPCNPNIGGTAKGHLVREIDALG 70 Query: 67 GLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAG 126 G MG D IQ R+LN KGPAV R QAD++ Y+ M+R + QENL + Q EV Sbjct: 71 GEMGVNIDHTFIQSRMLNTSKGPAVHSLRAQADKKDYQFRMKRVLEEQENLQIRQIEVTE 130 Query: 127 FNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSF 186 E N I+ ++ ++ ++ R V+L+TGT+L+G I IG++ G G P+N L S Sbjct: 131 LLVEDNKITGVITKNGAIFRAKAVILSTGTYLKGKIIIGEVSYSGGPNGLFPANDLSQSL 190 Query: 187 MKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTN 246 + R KTGTPAR++ +++ + K +Q D++++PFSFM+ I QI C +T TN Sbjct: 191 LDLGISLRRFKTGTPARINRRSVDFSKMIEQPGDDKIVPFSFMSGNIDKEQISCYLTYTN 250 Query: 247 LETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVY 306 +TH +I ENI S IY+G IK GPRYCPSIEDK++RF ++ HQIF+EPEGL+T +Y Sbjct: 251 EQTHNVIKENIGRSPIYNGSIKGVGPRYCPSIEDKVMRFPDKLQHQIFVEPEGLDTLEMY 310 Query: 307 PNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLA 366 G+S++LPEE+Q + +RT+PGLE V I+R YAIEYD ++P EL PTLE K + GL+ A Sbjct: 311 VGGMSSSLPEEVQLKMMRTLPGLENVEIMRTAYAIEYDSVDPTELEPTLEFKNVEGLYGA 370 Query: 367 GQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRM 426 GQ NG++GYEEA AQGLVAGIN+A K + + +R+D+YIGV+IDDL +KG EPYRM Sbjct: 371 GQFNGSSGYEEAGAQGLVAGINAALKIKGEEPMILTRSDAYIGVLIDDLVTKGTNEPYRM 430 Query: 427 FTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSK 486 TSRAEYR+ LR DNAD RLT IG K+G + E R + F LK L +T+K Sbjct: 431 MTSRAEYRLILRQDNADFRLTEIGKKVGLVTEERYETFLNRKNTIENELERLKKLQITNK 490 Query: 487 N------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 L+S S K K + YE + P+ +L + P+ + S + E++ I + Sbjct: 491 RETNEFLLASGSAELK---KPISFYELIKRPEVDYFSLKDLDPEREELSEDIGEQINIIA 547 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y Q+ + + + EK+L+PKD DYS++ L E ++KL+ +KP ++ QAS+I G Sbjct: 548 KYEGYISNQLEQVAQFRKFEKKLLPKDIDYSNVKGLRTEAEQKLNSIKPISIGQASRISG 607 Query: 601 MTPAALNLLLIYIK 614 ++PA +++LLIY++ Sbjct: 608 VSPADISVLLIYLE 621 >gi|119952976|ref|YP_945185.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Borrelia turicatae 91E135] gi|119861747|gb|AAX17515.1| putative tRNA (5-carboxymethylaminomethyl-2-thiouridylate) synthase subunit GidA [Borrelia turicatae 91E135] Length = 628 Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust. Identities = 288/624 (46%), Positives = 404/624 (64%), Gaps = 9/624 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 I+ +D IVIGGGHAG EA+ ++L T LIT TIG +SCNPAIGGL KG++VRE Sbjct: 7 IDMDFDAIVIGGGHAGIEASLALSRLNFKTLLITQNLDTIGKLSCNPAIGGLAKGNMVRE 66 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G MG + D + IQFR+LN +GPAV+ PR QAD+ +Y++ + + Q NLD+ Q Sbjct: 67 IDALGGEMGCLVDFSMIQFRILNKSRGPAVQAPRAQADKLVYQVKAKETLERQINLDLFQ 126 Query: 122 GEVAGF--NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 V+ F N+ +N I +V + + VVLTTGTFLRG I IG+ + GR+ + + Sbjct: 127 DTVSDFLLNSMRNRIEGVVTERGNKFTSRVVVLTTGTFLRGKIFIGEYRACMGRISEPAA 186 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIE 239 L ++ F+ GRLKTGTPAR+ K+I + KTE QF D +IPFSF KI Q+ Sbjct: 187 YGLEKILLELGFEMGRLKTGTPARVHRKSINFAKTEIQFGDSDIIPFSFSNTKIDKVQLS 246 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH II +N+ S +YSG+I GPRYCPSIEDKIV+F +++ HQIF+EPEG Sbjct: 247 CYITYTNKKTHAIISDNMHLSPLYSGEIIGNGPRYCPSIEDKIVKFKDKDKHQIFIEPEG 306 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L+T+ +Y NG+S++LPE++Q + I +I GLE I RPGYA+EYDYINP EL+ +LETK+ Sbjct: 307 LSTEEMYLNGLSSSLPEDVQKRLINSIDGLENAVITRPGYAVEYDYINPIELYASLETKR 366 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 + GLF+AGQ NG++GYEEAAAQGL+AGIN+A K D + RT SYIGV+IDDL +KG Sbjct: 367 VKGLFVAGQTNGSSGYEEAAAQGLMAGINAALKLQGKDPMILPRTSSYIGVLIDDLVTKG 426 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAE+R++LR D +D RL G ++G + E + R+ ++ ++ LL+ Sbjct: 427 TKEPYRMFTSRAEHRLNLRHDTSDKRLIKWGYEVGLVSEEKYSRYFFKEKQVEEIKELLR 486 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 L + S+ + + ++ Y + P ++ +L I P S +++E+++++ Sbjct: 487 QRRLKEREASTLQL---KKHISKDFYHIIKDPYINLSDLIDIDPKLNA-SKVILEQVELD 542 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ +++ E +P DFDY + LS E +EK ++P NL QAS+I Sbjct: 543 IKYEGYINRQKDLIRKMNNLELIKLPLDFDY-EIDGLSREAREKFVKIQPANLAQASRIS 601 Query: 600 GMTPAALNLLLIYIK--KNTVKLN 621 G+ + +LLIY KN V LN Sbjct: 602 GVRNTDIQVLLIYFSSPKNKVVLN 625 >gi|228911323|ref|ZP_04075127.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis IBL 200] gi|228848341|gb|EEM93191.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis IBL 200] Length = 629 Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust. Identities = 286/622 (45%), Positives = 394/622 (63%), Gaps = 13/622 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E I +V Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEDGICKGVVTQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRSFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVVLGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G ++G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEVGREIGLIKEERYERFTNKKLQIEQEKERLSSIIIK 486 Query: 485 S--------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 +N+ + + +DG A + L P+ + +++ + P + S V E++ Sbjct: 487 PRPEVQELIRNIGGSEL---KDGI--RASDLLRRPEMTYEHIHLLVPSEVELSDEVTEQV 541 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS Sbjct: 542 EIQIKYEGYIEKSLQQVERMKKMESKKIPVDIDYDAISSLASEARQKLKDVRPLSMGQAS 601 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+ PA +++LL+YI++ + Sbjct: 602 RISGVNPADISILLVYIEQGKI 623 >gi|315185860|gb|EFU19625.1| glucose inhibited division protein A [Spirochaeta thermophila DSM 6578] Length = 619 Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust. Identities = 283/614 (46%), Positives = 389/614 (63%), Gaps = 6/614 (0%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALD 66 DVIVIGGGHAG EAA A++LG +T LIT TIG MSCNPA+GGL KG++VRE+DAL Sbjct: 4 DVIVIGGGHAGIEAALAASRLGCTTLLITQLLDTIGKMSCNPAVGGLAKGNIVREVDALG 63 Query: 67 GLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAG 126 G MGR+ D IQFR+LN +GPAV+ PR QAD++ Y + + Q+ L + Q V Sbjct: 64 GEMGRLIDRTMIQFRMLNRSRGPAVQCPRAQADKQAYAQRAKWSLEQQKGLFLFQDTVVD 123 Query: 127 FNTEK--NIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 F ++ I +V + VVLTTGTF+ I IG+ + P GR+G+ + L Sbjct: 124 FVLDEAGREIRGVVTERGRRFHARKVVLTTGTFMEAKIFIGEYETPGGRLGEPAACGLGG 183 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F GRLKTGTPAR+ ++ + K ++Q DE +IPFSF D + RQ+ C IT Sbjct: 184 VLRRLGFTVGRLKTGTPARVLRSSLDFSKMQEQPGDEEIIPFSFSHDTLEVRQVPCYITF 243 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETHRII EN+ S +Y G I GPRYCPS+EDK+VRF +R+ HQ+F+EPEGL+T+ Sbjct: 244 TTPETHRIIRENLHRSPLYGGRIVGRGPRYCPSLEDKVVRFPDRDRHQVFVEPEGLSTEE 303 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y NGIS++LPEE+Q FI TIPGLE I+RPGYA+EYDY+ P +L+PTLETK+I GL+ Sbjct: 304 MYLNGISSSLPEEVQEAFIHTIPGLEHAVIMRPGYAVEYDYVEPTQLYPTLETKRIRGLY 363 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 +AGQ NGT+GYEEA QGLVAGIN+A + R ++YIGV+IDDL +KG EPY Sbjct: 364 IAGQTNGTSGYEEAGGQGLVAGINAALACRGEPPLVLGRDEAYIGVLIDDLVTKGTKEPY 423 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR++LR D AD RL ++G R + I + ++ LL+ LT Sbjct: 424 RMFTSRAEYRLALRHDTADIRLLEKAYRIGLQSREMFDRLQEKIHVLDAIKELLRQRRLT 483 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + + + Y+ L P ++ +L + P+ K+ + +I+ Y Sbjct: 484 QEEAERRGLPQLAPHVGKPLYQVLKDPRVTLDDLAFLVPELSKYPRPWVRTAEIDVKYEG 543 Query: 545 YTGR--QMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMT 602 Y R QM+E K K E+ R IP FDYS + LS+E +EKLS ++P +L QAS+I G+ Sbjct: 544 YLLREQQMVE-KFRKMEDMR-IPDHFDYSEVEGLSSEAREKLSTIRPLSLGQASRISGIR 601 Query: 603 PAALNLLLIYIKKN 616 + + +L++Y+ ++ Sbjct: 602 SSDIAVLMVYLSRS 615 >gi|228924228|ref|ZP_04087499.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228835446|gb|EEM80816.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 629 Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust. Identities = 285/622 (45%), Positives = 396/622 (63%), Gaps = 13/622 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E+ + +V Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEEGVCKGVVTQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKEEVVLGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G ++G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEVGREIGLIKEERYERFTNKKLQIEQEKERLSSIIIK 486 Query: 485 S--------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 +N+ + + +DG A + L P+ + +++ + P + S V E++ Sbjct: 487 PRPEVQELIRNIGGSEL---KDGI--RASDLLRRPEMTYEHIHLLVPSEVELSDEVKEQV 541 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS Sbjct: 542 EIQIKYEGYIEKSLQQVERMKKMESKKIPVDIDYDAISSLASEARQKLKDVRPLSMGQAS 601 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+ PA +++LL+YI++ + Sbjct: 602 RISGVNPADISILLVYIEQGKI 623 >gi|30023507|ref|NP_835138.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus ATCC 14579] gi|38372296|sp|Q814F7|MNMG_BACCR RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|29899068|gb|AAP12339.1| Glucose inhibited division protein A [Bacillus cereus ATCC 14579] Length = 629 Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust. Identities = 285/622 (45%), Positives = 395/622 (63%), Gaps = 13/622 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFAYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E+ + +V Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEEGVCKGVVTQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVVLGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G ++G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEVGREIGLIKEERYERFTNKKLQIEQEKERLSSIIIK 486 Query: 485 S--------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 +N+ + + +DG A + L P+ + +++ + P + S V E++ Sbjct: 487 PRPEVQELIRNIGGSEL---KDGI--RASDLLRRPEMAYEHIHLLVPSEVELSDEVKEQV 541 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS Sbjct: 542 EIQIKYEGYIEKSLQQVERMKKMESKKIPVDIDYDAISSLASEARQKLKDVRPLSMGQAS 601 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+ PA +++LL+YI++ + Sbjct: 602 RISGVNPADISILLVYIEQGKI 623 >gi|323496917|ref|ZP_08101945.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio sinaloensis DSM 21326] gi|323317991|gb|EGA70974.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio sinaloensis DSM 21326] Length = 631 Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust. Identities = 289/623 (46%), Positives = 389/623 (62%), Gaps = 9/623 (1%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA +A+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHENFDVIVVGGGHAGTEAALASARTGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAKAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVREALENAPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + +V Q R VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQSVDDLIVENDKAVGVVTQMGLRFRAEAVVLTVGTFLGGKIHIGMESSSGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D +T+ + + E Q D FSFM + + +QI Sbjct: 182 ALADRLRELPFRVDRLKTGTPPRIDARTVDFSELEVQHGDNPTPVFSFMGQRSQHPQQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CFITHTNEQTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTHELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 ISGLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 ISGLFFAGQINGTTGYEEAAAQGLMAGLNASLYSQNKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG I + R RF + ++ R LK Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLIDDERWARFNEKVENMAKERQRLK 481 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYE-----FLSYPDFSIQNLFSICPDARKF-SSLVI 533 + K S + Q K+ A E L P+ + L + A Sbjct: 482 ETWMNPK--SEGIDALNQLLKSPMAREASGEDLLRRPEMTYDQLTQLEAFAPAMEDQQAA 539 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I+ Y Y RQ E ++ E +P D DY+ + LSNE+ KLS KP ++ Sbjct: 540 EQVEIQVKYEGYIKRQQDEIEKSLRHENTKLPVDLDYAKVSGLSNEVVAKLSQAKPESIG 599 Query: 594 QASKIEGMTPAALNLLLIYIKKN 616 AS+I G+TPAA+++LL+++KK+ Sbjct: 600 IASRISGITPAAISILLVHLKKH 622 >gi|77361915|ref|YP_341490.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudoalteromonas haloplanktis TAC125] gi|123589145|sp|Q3IK39|MNMG_PSEHT RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|76876826|emb|CAI88048.1| tRNA modification, oxidoreductase-like with FAD/NAD(P)-binding domain [Pseudoalteromonas haloplanktis TAC125] Length = 629 Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust. Identities = 288/621 (46%), Positives = 401/621 (64%), Gaps = 5/621 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA AA++G +T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 IFHENFDVIVVGGGHAGTEAALAAARMGMNTLLLTHNMDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G M + D GIQFR LN KGPAVR R QADR LY+ A+Q + +Q+NL + Sbjct: 62 EIDALGGAMAQAIDKGGIQFRTLNSSKGPAVRATRAQADRALYKAAIQTTLQNQDNLKIF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q E + ++ +V Q +VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQSCDDLIVENDRVTGVVTQMGLRFSAPSVVLTVGTFLGGQIHIGLENFKGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D +T+ + K ++Q D + FSFM + +QI Sbjct: 182 ALADRLRELPFRVDRLKTGTPPRIDARTVDFSKMQEQAGDTPIPVFSFMGKPSDHPQQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I +N+ S +Y G I+ GPRYCPSIEDKIVRF +++ HQIF+EPEG Sbjct: 242 CYITFTNEKTHDVIRKNLHRSPMYGGVIEGIGPRYCPSIEDKIVRFADKDKHQIFVEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L + +YPNGIST+LP ++Q + +++I G E +I RPGYAIEYD+ +P++L +LETK Sbjct: 302 LTSYELYPNGISTSLPFDVQIEIVQSITGFENAHICRPGYAIEYDFFDPRDLKRSLETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEA AQGL+AG+N+A K + R ++Y+GV+IDDLT+ G Sbjct: 362 IDGLFFAGQINGTTGYEEAGAQGLIAGMNAALKVQGKESWTPRRDEAYVGVLIDDLTTLG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT G +LG + + R + + + ++ + +K Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADIRLTEKGRELGLVNDERWQAYNEKMEVIAKEKQRIK 481 Query: 480 SLVLTSKNLSSTSI-SFKQDGKTRTAY--EFLSYPDFSIQNLFSICPDARKFSS-LVIER 535 + + + + + TR A E L P+ +L +I +F++ +E+ Sbjct: 482 DTWIHKDHTMIDQVNALLKTPLTREASLEELLRRPEIRYNDLMAIDGLGSEFTNQAALEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I + YA Y RQ E + E+ ++PK+FDY ++ LSNE+ KL +P + QA Sbjct: 542 VEIHTKYAGYIVRQQDEINKQLRHEQTILPKEFDYKTVSGLSNEVVAKLIDARPDTIGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKKN 616 S+I G+TPAA++LLL+Y+KK Sbjct: 602 SRISGITPAAISLLLVYLKKQ 622 >gi|289551830|ref|YP_003472734.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus lugdunensis HKU09-01] gi|289181361|gb|ADC88606.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus lugdunensis HKU09-01] Length = 626 Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust. Identities = 286/623 (45%), Positives = 400/623 (64%), Gaps = 7/623 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + ++YDVIVIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VRE Sbjct: 1 MTQNYDVIVIGAGHAGIEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R I + +LD++Q Sbjct: 61 IDALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEAHLDIMQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G V E N++ + + VV+TTGTFLRG I +G +K +G PS + Sbjct: 121 GMVDDLIIEDNVVKGVRTNIGTEYHAKAVVITTGTFLRGEIILGNMKYSSGPNHQLPSIT 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L ++ + F+ R KTGTP R++ KTI + KTE Q D+ FSF T + Q+ C Sbjct: 181 LADNLRELGFEVVRFKTGTPPRVNAKTIDYSKTEIQPGDDVGRAFSFETTEYILDQLPCW 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN ETH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG N Sbjct: 241 LTYTNGETHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRN 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETKKI Sbjct: 301 TNEVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKKIK 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 L+ AGQINGT+GYEEAA QG++AGIN+A K SR+D+YIGV+IDDL +KG Sbjct: 361 NLYTAGQINGTSGYEEAAGQGIMAGINAAGKVLGTGEKILSRSDAYIGVLIDDLVTKGTN 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQ----EYNFLRSL 477 EPYR+ TSRAEYR+ LR DNAD RLT IG +LG I E R RF + Q E + L + Sbjct: 421 EPYRLLTSRAEYRLLLRHDNADLRLTDIGYELGMISEARYARFNEKRQQIQDEIDRLTHI 480 Query: 478 -LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 +K T + + S +DG A + L P+ + + I +A + V E++ Sbjct: 481 RIKPNAHTQSVIEAHGGSQLKDGI--LAIDLLRRPEMTYDTILEILGEAHQLPEAVAEQV 538 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I++ Y Y + + + +++K E++ IP+D DYS + +L+ E +EKL+ +KP N+ QAS Sbjct: 539 EIQTKYEGYINKSLQQVEKVKRMEQKKIPEDLDYSKVDSLATEAREKLAKVKPLNIAQAS 598 Query: 597 KIEGMTPAALNLLLIYIKKNTVK 619 +I G+ PA +++LL+Y+++ ++ Sbjct: 599 RISGVNPADISILLVYLEQGKLQ 621 >gi|285017165|ref|YP_003374876.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gida protein [Xanthomonas albilineans GPE PC73] gi|283472383|emb|CBA14888.1| probable trna uridine 5-carboxymethylaminomethyl modification enzyme gida protein [Xanthomonas albilineans] Length = 630 Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust. Identities = 289/617 (46%), Positives = 382/617 (61%), Gaps = 9/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAG EAA +A+ GA T L+TH T+G+MSCNPAIGG+GKGHLV+EIDAL Sbjct: 9 YDVIVIGGGHAGTEAALASARAGAGTLLLTHNMETVGAMSCNPAIGGIGKGHLVKEIDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + AD AGIQ+R LN KGPAVR R QADR LYR A++R + +Q NL V Q V Sbjct: 69 GGAMAQAADLAGIQWRTLNASKGPAVRATRCQADRSLYRNAIRRLVEAQPNLTVFQAAVD 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + + ++ Q VVLT GTFL G IHIG+ + GR GD P+ +L + Sbjct: 129 DLVMDGERVRGVLTQTGLRFEAGAVVLTAGTFLAGKIHIGQTQYAGGRAGDPPATALAQA 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 F RLKTGTP R+DG+++ + E+Q D L SF+ D + RQ+ C IT Sbjct: 189 LRDGRFGVDRLKTGTPPRIDGRSLDYTAMEEQPGDAPLPVMSFLGDVAQHPRQVSCWITH 248 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T TH II + S +Y+G I+ GPRYCPSIEDK+VRF E+ HQIF+EPEGL+ Sbjct: 249 TTERTHAIIRGALDRSPLYTGQIEGIGPRYCPSIEDKVVRFAEKASHQIFVEPEGLDVVE 308 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q + +R+I G E+ +I RPGYAIEYD+ +P+ L +LETK + GLF Sbjct: 309 IYPNGISTSLPFDVQLELVRSIRGFERAHITRPGYAIEYDFFDPRGLKASLETKAMPGLF 368 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR+ L+ R +YIGV+IDDL + G EPY Sbjct: 369 FAGQINGTTGYEEAAAQGLIAGLNAARQVQGLEPWSPRRDQAYIGVLIDDLITHGTSEPY 428 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + E R RF L+ T Sbjct: 429 RMFTSRAEYRLQLREDNADARLTGIGRELGLVDEARWARFQTKQDAVARENERLRGFWAT 488 Query: 485 SKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLFSI---CPDARKFSSLVIERLQI 538 N ++ + + + P+ L + P + V E+++I Sbjct: 489 PSNALGREVAATLGVAVSRETNVLDLIKRPELDYAALMRVPLLGPGV--ADTQVAEQVEI 546 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 YA Y RQ E + E IP FDY+ + LS E+++KL ++P + QA +I Sbjct: 547 GIKYAGYLERQREEIARQQRHEDTTIPTAFDYAQVRGLSAEVQQKLQRVRPQTVGQAQRI 606 Query: 599 EGMTPAALNLLLIYIKK 615 GMTPAA++LLL+++++ Sbjct: 607 PGMTPAAISLLLVHLER 623 >gi|268593523|ref|ZP_06127744.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Providencia rettgeri DSM 1131] gi|291310947|gb|EFE51400.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Providencia rettgeri DSM 1131] Length = 629 Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust. Identities = 290/621 (46%), Positives = 394/621 (63%), Gaps = 13/621 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLVREIDA Sbjct: 6 QFDVIVIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVREIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLM D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 66 LGGLMATATDKAGIQFRTLNASKGPAVRATRAQADRVLYRQAVRMALENQPNLMIFQQPV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E N ++ + + + VVLT GTFL G IHIG GR GD PS SL Sbjct: 126 EDLIVENNRVTGAITRMGLKFKAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPSISLSQ 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 + RLKTGTP R+D +TI + + +Q D+ + FSF+ + + +Q+ C IT Sbjct: 186 RLRELPLRVNRLKTGTPPRIDARTIDFSQLAQQLGDDPMPVFSFLGSQDQHPQQMPCHIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +++ HQIFLEPEGL ++ Sbjct: 246 YTNEKTHEVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKDSHQIFLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q Q + ++ G+E IIRPGYAIEYD+ +P++L TLE+K I GL Sbjct: 306 EIYPNGISTSLPFDVQMQIVHSMKGMENARIIRPGYAIEYDFFDPRDLKQTLESKFIDGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEA AQGL+AG+N+A+ + L+ R +YIGV++DDL + G EP Sbjct: 366 FFAGQINGTTGYEEAGAQGLLAGLNAAQHAFGLEGWFPRRDQAYIGVLVDDLCTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT G +LG + + R F ++ R LK + + Sbjct: 426 YRMFTSRAEYRLMLREDNADLRLTEKGRELGLVDDVRWAHFNNKVELIEKERQRLKDIWV 485 Query: 484 TSKNLSSTSI--------SFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIER 535 K+ + T I S + +G+ ++Y + NLF+ D + + ++ Sbjct: 486 HPKSDNHTEIDGILTVPLSKEANGEDLLRRPEMTYKMLTSLNLFAPGIDDPQAA----DQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y RQ E + E L+P D DY + LSNE+ KL+ KP ++ QA Sbjct: 542 VEIQVKYEGYIARQKEEIERQLRNENTLLPVDLDYKQVKGLSNEVMAKLNDHKPTSIGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKKN 616 S+I G+TPAA+++LL+++KK Sbjct: 602 SRISGITPAAISILLVWLKKQ 622 >gi|224823521|ref|ZP_03696630.1| glucose inhibited division protein A [Lutiella nitroferrum 2002] gi|224603976|gb|EEG10150.1| glucose inhibited division protein A [Lutiella nitroferrum 2002] Length = 630 Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust. Identities = 287/618 (46%), Positives = 393/618 (63%), Gaps = 7/618 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+GGGHAG EAA AA++G ST L+TH T+G MSCNP+IGG+GKGHLV+E+DA Sbjct: 6 TFDVIVVGGGHAGTEAALAAARMGCSTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D GIQFR LN KGPAVR R QADR LY+ A++ + +Q+NL + Q V Sbjct: 66 LGGAMALATDIGGIQFRTLNASKGPAVRATRAQADRVLYKAAIRHVLENQDNLTLFQQPV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ + R TVVLT GTFL G IH+G GR GD+ +++L Sbjct: 126 DDLLIEGDRVAGAITAIGITFRAKTVVLTAGTFLSGKIHVGLENYTGGRAGDAAASTLGA 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK-ITNRQIECGIT 243 + D GRLKTGTP R+DG+T+ + E+Q D FS+ + + +Q+ C IT Sbjct: 186 RLRELDLPVGRLKTGTPPRIDGRTVDFSVMEEQPGDTPEPVFSYRGSRSLHPKQLPCWIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +++G I+ GPRYCPSIEDKI RF +++ HQ+FLEPEGL T Sbjct: 246 HTNERTHEIIRSGFERSPMFTGVIEGVGPRYCPSIEDKINRFADKDSHQVFLEPEGLTTH 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP ++Q +R+I G+E +I+RPGYAIEYDY +P+ L TLETK I GL Sbjct: 306 EFYPNGISTSLPFDVQLAAVRSIRGMENAHILRPGYAIEYDYFDPRGLKSTLETKSIQGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+A S D C R ++Y+GV++DDL +KGV EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGLNAALYSRDQDGWCPRRDEAYLGVLVDDLITKGVSEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R+ LR DNAD RLT G +LG +G+ + F + ++ LK+ L Sbjct: 426 YRMFTSRAEFRLQLREDNADLRLTEAGRRLGLVGDAQWDAFCRKRDAVEAEKTRLKTTYL 485 Query: 484 TSKNLSSTSIS---FKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIE 539 + +++ K + ++ L PD S L ++ V E+++I+ Sbjct: 486 HPAKVDMAAVAQLLGKPIEREYNLHDLLKRPDVSYTALMTLAEAGGGVDDGAVAEQVEIQ 545 Query: 540 SSYAAYTGRQMIE-AKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 Y Y RQ E A+ E+ RL P D DYS + LS E+++KL+ +P L QAS+I Sbjct: 546 VKYQGYIDRQNDELARRDNLEDVRL-PADIDYSLVKGLSKEVQQKLNSQRPETLGQASRI 604 Query: 599 EGMTPAALNLLLIYIKKN 616 +G+TPAA+ LL++++K+ Sbjct: 605 QGITPAAVALLMVHLKRG 622 >gi|183597128|ref|ZP_02958621.1| hypothetical protein PROSTU_00367 [Providencia stuartii ATCC 25827] gi|188023438|gb|EDU61478.1| hypothetical protein PROSTU_00367 [Providencia stuartii ATCC 25827] Length = 629 Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust. Identities = 289/622 (46%), Positives = 394/622 (63%), Gaps = 15/622 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA Sbjct: 6 QFDVIVIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLM D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 66 LGGLMAIATDKAGIQFRTLNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQPV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E N ++ V + + VVLT GTFL G IHIG GR GD PS SL Sbjct: 126 EDLIVENNTVTGAVTRMGLKFKAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPSVSLSQ 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 + RLKTGTP R+D +TI + + +Q D+ + FSF+ + + +Q+ C IT Sbjct: 186 RLRELPLRVNRLKTGTPPRIDARTIDFSQLAQQLGDDPMPVFSFLGSQDQHPQQMPCYIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +R+ HQIFLEPEGL ++ Sbjct: 246 HTNEKTHDVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRDAHQIFLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q Q + ++ G+E I+RPGYAIEYD+ +P++L TLE+K I+GL Sbjct: 306 EIYPNGISTSLPFDVQMQIVHSMKGMENARIVRPGYAIEYDFFDPRDLKQTLESKFINGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEA AQGL+AG+N+A+ + L+ R +Y+GV++DDL + G EP Sbjct: 366 FFAGQINGTTGYEEAGAQGLLAGLNAAQYAFDLEGWFPRRDQAYMGVLVDDLCTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT G +LG + + R F ++ R LK + + Sbjct: 426 YRMFTSRAEYRLMLREDNADLRLTEKGRELGLVDDVRWAHFNNKVELIEKERQRLKDIWV 485 Query: 484 TSKN--------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIE 534 K+ + S +S + +G+ + L P+ Q L S+ A + + Sbjct: 486 HPKSEGHDEINQILSVPLSKEANGE-----DLLRRPEMDYQTLISLSRFAPGITDPQAAD 540 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E + E L+P D DY + LSNE+ KL+ KP ++ Q Sbjct: 541 QVEIQVKYEGYIARQQEEIERQLRNENTLLPVDLDYKQVKGLSNEVMAKLNDHKPTSIGQ 600 Query: 595 ASKIEGMTPAALNLLLIYIKKN 616 AS+I G+TPAA+++LL+++KK Sbjct: 601 ASRISGITPAAISILLVWLKKQ 622 >gi|229130729|ref|ZP_04259682.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus BDRD-Cer4] gi|228652746|gb|EEL08631.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus BDRD-Cer4] Length = 629 Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust. Identities = 285/622 (45%), Positives = 395/622 (63%), Gaps = 13/622 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFAYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E+ + +V Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEEGVCKGVVTQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVVLGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G ++G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEVGREIGLIKEERYERFTNKKLQIEQEKERLSSIIIK 486 Query: 485 S--------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 +N+ + + +DG A + L P+ + +++ + P + S V E++ Sbjct: 487 PRPEVQELIRNIGGSEL---KDGI--RASDLLRRPEMAYEHIHLLVPSEVELSDEVKEQV 541 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS Sbjct: 542 EIQIKYEGYIEKSLQQVERMKKMESKKIPVDIDYDAISSLASEARQKLKDVRPLSMGQAS 601 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+ PA +++LL+YI++ + Sbjct: 602 RISGVNPADISILLVYIEQGKI 623 >gi|317131001|ref|YP_004097283.1| glucose inhibited division protein A [Bacillus cellulosilyticus DSM 2522] gi|315475949|gb|ADU32552.1| glucose inhibited division protein A [Bacillus cellulosilyticus DSM 2522] Length = 628 Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust. Identities = 279/617 (45%), Positives = 390/617 (63%), Gaps = 3/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAG EA AA++GA+T ++T + M CNP++GG KG +VRE+DAL Sbjct: 8 YDVIVIGAGHAGVEAGLAAARMGANTLMLTLNLDAVAYMPCNPSVGGPAKGIVVREVDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + D IQ R+LN KGPAVR R QAD+ LY+ M++ I ENL + QG V Sbjct: 68 GGEMAKNIDKTHIQMRMLNTGKGPAVRALRAQADKFLYQHEMKKTIEETENLLLRQGMVE 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + ++ ++ Q + +VV+TTGT+LRG + IG L +G PS +L Sbjct: 128 RLIIENDKVTGVITQTGAEYYAKSVVITTGTYLRGKVIIGDLSYESGPNNQQPSVNLSYH 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + F+ R KTGTP R++ +TI + KTE Q DE FS+ T K Q+ C +T T Sbjct: 188 LQELGFEMVRFKTGTPPRVNSQTIDYSKTEIQPGDEVPRAFSYETTKYITDQLPCWLTYT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N ETH II N+ S +YSG I+ GPRYCPSIEDKIVRF ++ HQIFLEPEG NT V Sbjct: 248 NDETHSIINSNLDRSPMYSGMIEGTGPRYCPSIEDKIVRFNDKPRHQIFLEPEGRNTQEV 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+ST+LPE++QH +R+IPGLE V ++RPGYAIEYD I P +L+P+LETKKI GLF Sbjct: 308 YVQGLSTSLPEDVQHHILRSIPGLEGVTMMRPGYAIEYDAIVPTQLWPSLETKKIEGLFT 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGT+GYEEAA QGL+AGIN+ARK+ + + R+D+YIGV+IDDL +KG EPYR Sbjct: 368 AGQINGTSGYEEAAGQGLMAGINAARKAQNKESVILKRSDAYIGVLIDDLVTKGTNEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT- 484 + TSRAEYR+ LR DNAD RLT IG ++G I R +F ++ + L S ++ Sbjct: 428 LLTSRAEYRLLLRHDNADLRLTEIGHEIGLIKSERFDQFLSKKEQIEREKDRLASTIVKV 487 Query: 485 --SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSY 542 N T I + L P+ + ++ I P K V E+++I+ Y Sbjct: 488 TEETNQFLTEIGSSPLKEPMYGVGLLKRPEITYTHIAQIVPPLEKLDDDVAEQVEIQVKY 547 Query: 543 AAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMT 602 Y +Q+ + ++K E + +P+D DY ++ L+ E K+KLS ++P ++ QAS++ G+ Sbjct: 548 EGYISKQLEQVDKLKKMENKKLPEDLDYHAINGLATEAKQKLSEVRPLSMAQASRVSGVN 607 Query: 603 PAALNLLLIYIKKNTVK 619 PA +++LL+Y+++ ++ Sbjct: 608 PADVSILLVYMEQGKLQ 624 >gi|328952164|ref|YP_004369498.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Desulfobacca acetoxidans DSM 11109] gi|328452488|gb|AEB08317.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Desulfobacca acetoxidans DSM 11109] Length = 631 Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust. Identities = 277/617 (44%), Positives = 388/617 (62%), Gaps = 9/617 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYD+IVIG GHAGCE A AA++G + TI M+CNPA+GGL KGHLV+EIDA Sbjct: 7 SYDLIVIGAGHAGCEGALAAARMGLKVLIFNLNLDTIAHMACNPAVGGLAKGHLVKEIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G++G +AD GIQFR+LN KGPAVRG R Q D++ YRLAM+ + + + + + V Sbjct: 67 LGGVIGYLADQTGIQFRLLNTSKGPAVRGTRIQCDKQAYRLAMKAHLEKEPLVHIREAMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 TE I + R V++TTGTFL G+IHIG + PAGR G+ S L Sbjct: 127 DRLLTEDGRIVGVQESYGFCYRARAVLITTGTFLNGLIHIGPHQTPAGRAGEFASTKLAA 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + + F GR+KTGTP RL +I + ++ +R FS+ + ++ QI C +T Sbjct: 187 NLQELGFRLGRMKTGTPPRLRASSIDFSGMDRLEGSDRPYHFSWRSTRVDRPQISCFVTH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN THR + +NI+HS +YSG IK RYCPS+EDK++RF E+ HQ+ LEPEGL+T Sbjct: 247 TNGTTHRWVRDNIRHSPLYSGVIKGISARYCPSLEDKVMRFPEKTSHQVTLEPEGLDTVE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+ LP EIQ Q R++PGLE ++RP YAIEYDY+ P +L PTLETK I GLF Sbjct: 307 IYAKGLGNCLPVEIQLQLFRSVPGLEAAEVMRPAYAIEYDYVYPTQLLPTLETKAIRGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGT+GYEEAAAQGL AG+N+A + R+ +Y+ V++DDL +KG EPY Sbjct: 367 LAGQINGTSGYEEAAAQGLWAGVNAACQILGRPPFLLDRSQAYMAVLVDDLVTKGTREPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGER-----RQKRFAKYIQEYNFLRSLLK 479 RMFTSRAEYR+ LR DNAD RLT IG LG + + ++K+ +E L Sbjct: 427 RMFTSRAEYRLLLREDNADLRLTEIGAALGLVDRQALEALQEKKRLLAEEEARLAGKRLF 486 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAY-EFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 L ++ L S S S + K T + + L P+ + L+++ + + ++E+++I Sbjct: 487 PLPEVNQALRSRSSS---ELKEPTPFLKLLKRPELDLPTLYTLAGEVPGAPAAILEQVEI 543 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 Y Y RQ+ K+ EK+ +P+DFDY ++P LSNE+++KL ++P +L QA++I Sbjct: 544 RHKYEGYINRQLEAVKQFVHLEKKRLPQDFDYDAIPGLSNEVRQKLKDIRPLSLGQAARI 603 Query: 599 EGMTPAALNLLLIYIKK 615 G+TPAA+ +LL+Y+K+ Sbjct: 604 SGVTPAAIAILLVYLKR 620 >gi|218234811|ref|YP_002370258.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus B4264] gi|228961747|ref|ZP_04123350.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis serovar pakistani str. T13001] gi|229051152|ref|ZP_04194696.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus AH676] gi|229112896|ref|ZP_04242427.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus Rock1-15] gi|229148033|ref|ZP_04276372.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus BDRD-ST24] gi|296505911|ref|YP_003667611.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus thuringiensis BMB171] gi|218162768|gb|ACK62760.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus B4264] gi|228635458|gb|EEK91949.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus BDRD-ST24] gi|228670575|gb|EEL25888.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus Rock1-15] gi|228722215|gb|EEL73616.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus AH676] gi|228797941|gb|EEM44951.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis serovar pakistani str. T13001] gi|296326963|gb|ADH09891.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus thuringiensis BMB171] Length = 629 Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust. Identities = 285/622 (45%), Positives = 395/622 (63%), Gaps = 13/622 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFAYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E+ + +V Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEEGVCKGVVTQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVVLGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G ++G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEVGREIGLIKEERYERFTNKKLQIEQEKERLSSIIIK 486 Query: 485 S--------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 +N+ + + +DG A + L P+ + +++ + P + S V E++ Sbjct: 487 PRPEVQELIRNIGGSEL---KDGI--RASDLLRRPEMTYEHIHLLVPSEVELSDEVKEQV 541 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS Sbjct: 542 EIQIKYEGYIEKSLQQVERMKKMESKKIPVDIDYDAISSLASEARQKLKDVRPLSMGQAS 601 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+ PA +++LL+YI++ + Sbjct: 602 RISGVNPADISILLVYIEQGKI 623 >gi|221069725|ref|ZP_03545830.1| glucose inhibited division protein A [Comamonas testosteroni KF-1] gi|220714748|gb|EED70116.1| glucose inhibited division protein A [Comamonas testosteroni KF-1] Length = 654 Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust. Identities = 293/639 (45%), Positives = 398/639 (62%), Gaps = 23/639 (3%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DVIV+GGGHAG EAA AA++G+ T L+TH T+G MSCNP+IGG+GKGHLV+E+D Sbjct: 5 QEFDVIVVGGGHAGTEAALAAARMGSKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 65 ALGGAMALATDKGGIQFRILNSSKGPAVRATRAQADRILYKAAIREMLENQPNLWLFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + + V Q R TVVLT GTFL G IH+G AGR GD P+ SL Sbjct: 125 VDDLMVEGDRVVGAVTQVGLKFRSRTVVLTAGTFLDGKIHVGLNNYAAGRAGDPPAVSLS 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFAD-------ERLIP-FSFMTDKITN 235 + GRLKTGTP R+DG++I + + E+Q D E +P FSFM ++ + Sbjct: 185 ARLKELQLPQGRLKTGTPPRIDGRSIDFSQCEEQPGDGMPGGVNEGEVPVFSFMGNRAMH 244 Query: 236 -RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 RQ+ C IT TN TH II S +++G I+ GPRYCPS+EDKI RF ++ HQIF Sbjct: 245 PRQMPCWITHTNARTHEIIRSGFDRSPMFTGKIEGVGPRYCPSVEDKINRFADKESHQIF 304 Query: 295 LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT 354 LEPEGL T YPNGIST+LP +IQ++ +R++ GLE +I+RPGYAIEYDY +P+ L + Sbjct: 305 LEPEGLTTHEFYPNGISTSLPFDIQYELVRSMKGLENAHILRPGYAIEYDYFDPRSLKSS 364 Query: 355 LETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDD 414 ETK+I GLF AGQINGTTGYEEAAAQGL AG+N+A + R ++Y+GV++DD Sbjct: 365 FETKQIQGLFFAGQINGTTGYEEAAAQGLFAGLNAALQCRGESPWMPRRDEAYLGVLVDD 424 Query: 415 LTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFL 474 L +KGV EPYRMFTSRAE+R+ LR DNAD RLT G ++G + + R F++ + Sbjct: 425 LITKGVTEPYRMFTSRAEFRLQLREDNADMRLTEAGRQMGLVDDVRWDSFSRKRDAVSRE 484 Query: 475 RSLLKSLVLTSKNLS---STSISFKQDGKTRTAYEFLSYPDFSIQNLF----------SI 521 LKS + + ++ S + K + ++ L P L + Sbjct: 485 TERLKSTWVNPRVVAAEESERVLGKAMEREYNLFDLLRRPGVDYDKLMDMNQGKYASADV 544 Query: 522 CPDA-RKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNEL 580 P+A + S VIE+++I + Y+ Y RQ E + E+ +P DFDY + ALS E+ Sbjct: 545 QPEALGELSDPVIEQVEIAAKYSGYIDRQKDEVERAAHFERLRLPLDFDYMQVAALSFEV 604 Query: 581 KEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 ++KL +P L QAS+I G+TPAA++LL++++KK K Sbjct: 605 RQKLQKHRPETLGQASRISGVTPAAISLLMVHLKKGGFK 643 >gi|282902628|ref|ZP_06310521.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus C160] gi|282921287|ref|ZP_06329005.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus C427] gi|282315702|gb|EFB46086.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus C427] gi|282597087|gb|EFC02046.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus C160] Length = 625 Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust. Identities = 286/621 (46%), Positives = 397/621 (63%), Gaps = 7/621 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VREID Sbjct: 3 QEYDVIVIGAGHAGVEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVREID 62 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R I +ENL ++QG Sbjct: 63 ALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEENLHIMQGM 122 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E N + + + V++TTGTFLRG I +G +K +G PS +L Sbjct: 123 VDELIIEDNEVKGVRTNIGTEYLSKAVIITTGTFLRGEIILGNMKYSSGPNHQLPSITLS 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 ++ + FD R KTGTP R++ KTI + KTE Q D+ FSF T + Q+ C +T Sbjct: 183 DNLRELGFDIVRFKTGTPPRVNSKTIDYSKTEIQPGDDVGRAFSFETTEYILDQLPCWLT 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN ETH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG NT+ Sbjct: 243 YTNAETHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRNTN 302 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETK I L Sbjct: 303 EVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKMIKNL 362 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGT+GYEEAA QGL+AGIN+A K SR+D+YIGV+IDDL +KG EP Sbjct: 363 YTAGQINGTSGYEEAAGQGLMAGINAAGKVLNTGEKILSRSDAYIGVLIDDLVTKGTNEP 422 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G +LG I E R RF + Q+ + L + + Sbjct: 423 YRLLTSRAEYRLLLRHDNADLRLTDMGYELGMISEERYARFNEKRQQIDAEIKRLSDIRI 482 Query: 484 TSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 K T +Q G +R A + L P+ + + I + + ++ V E+++I Sbjct: 483 --KPNEHTQAIIEQHGGSRLKDGILAIDLLRRPEMTYDIILEILEEEHQLNADVEEQVEI 540 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 ++ Y Y + + + +++K E++ IP+D DYS + +L+ E +EKLS +KP N+ QAS+I Sbjct: 541 QTKYEGYINKSLQQVEKVKRMEEKKIPEDLDYSKIDSLATEAREKLSEVKPLNIAQASRI 600 Query: 599 EGMTPAALNLLLIYIKKNTVK 619 G+ PA +++LLIY++++ ++ Sbjct: 601 SGVNPADISILLIYLEQSKLQ 621 >gi|296417422|ref|XP_002838357.1| hypothetical protein [Tuber melanosporum Mel28] gi|295634285|emb|CAZ82548.1| unnamed protein product [Tuber melanosporum] Length = 686 Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust. Identities = 285/632 (45%), Positives = 394/632 (62%), Gaps = 18/632 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +N+ +DV+VIGGGHAG EA A AA++GA TAL+T K TIG+ SCNP+ GG+GKG ++RE Sbjct: 38 LNQEFDVVVIGGGHAGSEACAAAARVGAKTALVTQKIDTIGTCSCNPSFGGIGKGIMIRE 97 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DALDG+ GR+ D AGIQFRVLN KGPAV GPR Q DR+LY+ MQ E++S NL ++Q Sbjct: 98 VDALDGVCGRITDKAGIQFRVLNRSKGPAVWGPRAQIDRKLYKKYMQEELMSYPNLSILQ 157 Query: 122 GEVA-------------GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLK 168 G VA G I+ + ++ +I+ VV+TTGTFL G IHIG Sbjct: 158 GSVADVVVDRVPEGQMIGMEGHYGKITGVRLESGEVIKARNVVITTGTFLGGEIHIGLTV 217 Query: 169 IPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSF 228 P+GRMG++ + L S + F GRLKTGTP R+DG+TI + Q D+ IPFS+ Sbjct: 218 FPSGRMGEAATFGLSKSLREAGFKLGRLKTGTPPRIDGRTIDYKSLLPQLGDDPPIPFSY 277 Query: 229 MTDKIT-NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGE 287 M +K+ +Q++C T T E+H ++ ++ S IK GPRYCPS+E KI+RF + Sbjct: 278 MNEKVQIEQQLQCHSTHTTPESHNLLRQHFHESIHIRETIK--GPRYCPSLESKIIRFEK 335 Query: 288 RNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN 347 R H I+LEPEG++ VVYPNGIS +P E+Q + ++TIPGLE+ +++PGY +EYDYI+ Sbjct: 336 RQNHMIWLEPEGIDDHVVYPNGISMTVPAEVQERLLKTIPGLEEAKMLQPGYGVEYDYID 395 Query: 348 PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSY 407 P+ L TLETK + GLFLAGQINGTTGYEEAAAQG+VAGIN+ S + SR+D+Y Sbjct: 396 PRSLRATLETKIVKGLFLAGQINGTTGYEEAAAQGVVAGINAGLSSQGKPQMTISRSDAY 455 Query: 408 IGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKY 467 IG+MIDDL +KGV EPYRMFTSR+E+R+S R DNAD RLT G G +G+ R F Sbjct: 456 IGIMIDDLITKGVSEPYRMFTSRSEFRMSSRADNADLRLTQAGRDHGVVGDARWAHFQTE 515 Query: 468 IQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNL--FSICPDA 525 RS L ++ +S + ++D R A+ L + +I L + Sbjct: 516 FSLMEDFRSALSNITQSSSEWRKRGLVVREDSARRNAFHLLRLSNMTIGKLAEMGVVGGL 575 Query: 526 RKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 ++ + R+ IE Y Y RQ K + +E +P D DY + LS E + L Sbjct: 576 DRWPERIRTRVGIEGVYEPYVTRQANAVKMFEKDEGLKLPADIDYDRVLGLSYEERVVLK 635 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYIKKNT 617 ++P ++ QA ++EG+ + N++ + I K T Sbjct: 636 RVRPESIGQARRVEGVRYLSCNIMDLSILKLT 667 >gi|157964062|ref|YP_001504096.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shewanella pealeana ATCC 700345] gi|189039358|sp|A8HAH4|MNMG_SHEPA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|157849062|gb|ABV89561.1| glucose inhibited division protein A [Shewanella pealeana ATCC 700345] Length = 629 Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust. Identities = 292/620 (47%), Positives = 381/620 (61%), Gaps = 15/620 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++G+ T L+TH T+G MSCNPAIGG+GKGHLV+EIDAL Sbjct: 7 FDVIVVGGGHAGTEAALASARMGSKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D AGIQFR LN KGPAVR R QADR LYR +Q + Q NL + Q V Sbjct: 67 GGAMAVATDFAGIQFRTLNSSKGPAVRATRAQADRALYRHKIQEILQHQANLRIFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + +V Q VVLT GTFL G IHIG GR GD P+ +L + Sbjct: 127 DLVVENGKVVGVVTQMGLAFEAPAVVLTAGTFLGGKIHIGLENYSGGRAGDPPAIALAHR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D TI + + +Q D+ L SF+ D + Q+ C IT Sbjct: 187 LRELPIRVGRLKTGTPPRIDANTIDFSQMTEQKGDDPLPVMSFIGDVNDHPEQVSCHITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II + S +YSG I+ GPRYCPSIEDK+ RF ++ HQIF+EPEGLNT Sbjct: 247 TNERTHDIIRGGLDRSPMYSGIIEGIGPRYCPSIEDKVNRFADKTSHQIFIEPEGLNTTE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q +R+I G+E I+RPGYAIEYDY +P++L +LETK I+GLF Sbjct: 307 IYPNGISTSLPFDVQLNLVRSIKGMENAEIMRPGYAIEYDYFDPRDLKNSLETKTIAGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG+N++ + + C R +Y+GV++DDL++ G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGMNASLQVQGKEAWCPRRDQAYLGVLVDDLSTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNF-LRSLLKSLVL 483 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F++ ++ L+ L V Sbjct: 427 RMFTSRAEYRLLLREDNADLRLTEKGRELGLVDDNRWALFSEKMESIETELQRLRGQWVH 486 Query: 484 TSKNLSSTSISFKQDGKTRTAY--EFLSYPDFSIQNLFSI------CPDARKFSSLVIER 535 + L TR A + L P+ L SI D R E+ Sbjct: 487 PNSPLVEALNPHLNTPITREATFEDLLRRPEMDYPKLMSIDGFGPSLEDQR-----AAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 +QI+ Y+ Y RQ E + E L+P D DY +P LSNE+ K++ KP + QA Sbjct: 542 VQIQVKYSGYIQRQQGEIDKAIRHETTLLPLDLDYQEVPGLSNEVIAKMNEHKPETIGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I GMTPAA+++LL+++KK Sbjct: 602 SRISGMTPAAISILLVHLKK 621 >gi|229153642|ref|ZP_04281818.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus m1550] gi|228629828|gb|EEK86481.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus m1550] Length = 629 Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust. Identities = 284/622 (45%), Positives = 395/622 (63%), Gaps = 13/622 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFAYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E+ + ++ Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEEGVCKGVITQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVVLGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G ++G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEVGREIGLIKEERYERFTNKKLQIEQEKERLSSIIIK 486 Query: 485 S--------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 +N+ + + +DG A + L P+ + +++ + P + S V E++ Sbjct: 487 PRPEVQELIRNIGGSEL---KDGI--RASDLLRRPEMTYEHIHLLVPSEVELSDEVKEQV 541 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS Sbjct: 542 EIQIKYEGYIEKSLQQVERMKKMESKKIPVDIDYDAISSLASEARQKLKDVRPLSMGQAS 601 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+ PA +++LL+YI++ + Sbjct: 602 RISGVNPADISILLVYIEQGKI 623 >gi|146309631|ref|YP_001190096.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas mendocina ymp] gi|166222721|sp|A4Y198|MNMG_PSEMY RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|145577832|gb|ABP87364.1| glucose inhibited division protein A [Pseudomonas mendocina ymp] Length = 630 Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust. Identities = 290/619 (46%), Positives = 389/619 (62%), Gaps = 9/619 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FDVIVIGGGHAGTEAALAAARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMATATDKGGIQFRILNSRKGPAVRATRAQADRVLYKAAVREILENQANLWIFQQAAD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + +V Q +VVLTTGTFL G+IHIG GR GD PS +L + Sbjct: 127 DLIVENAQVKGVVTQMGLRFHADSVVLTTGTFLGGLIHIGLQNYSGGRAGDPPSMALAHR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+DG+++ + +Q D SF+ + +QI C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPTPLMSFLGKREHQPKQISCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF +++ HQ+F+EPEGL T Sbjct: 247 TNARTHEIIAANLDRSPMYSGVIEGVGPRYCPSIEDKIHRFADKDSHQVFIEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R+I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVRSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ + C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGCNAALRAQGKEAWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDERWAAFEAKREGIVREEQRLKSTWVR 486 Query: 485 SKNLSSTSISFKQDGKTRTAYEF-----LSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 +I+ + T A+E+ L+ P+ L I ++ + V E+++I+ Sbjct: 487 PGTPQGDAIAARFG--TPLAHEYNLLNLLARPEIDYAALAEIT-ESPAVDNQVAEQVEIK 543 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + YA Y RQ E ++ E +P+D DYS++ LS E++ KL +P L QA +I Sbjct: 544 TKYAGYIDRQQDEIARLRASEDTKLPEDLDYSAISGLSKEIQFKLGNTRPATLGQAGRIP 603 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+TPAA++LLLI++KK + Sbjct: 604 GVTPAAISLLLIHLKKRSA 622 >gi|295429294|ref|ZP_06821916.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus EMRSA16] gi|295127053|gb|EFG56697.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus EMRSA16] Length = 625 Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust. Identities = 286/621 (46%), Positives = 396/621 (63%), Gaps = 7/621 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VREID Sbjct: 3 QEYDVIVIGAGHAGVEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVREID 62 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R I +ENL ++QG Sbjct: 63 ALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEENLHIMQGM 122 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E N + + + V++TTGTFLRG I +G +K +G PS +L Sbjct: 123 VDELIIEDNEVKGVRTNIGTEYLSKAVIITTGTFLRGEIILGNMKYSSGPNHQLPSITLS 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 ++ + FD R KTGTP R++ KTI + KTE Q D+ FSF T + Q+ C +T Sbjct: 183 DNLRELGFDIVRFKTGTPPRVNSKTIDYSKTEIQPGDDVDRAFSFETTEYILDQLPCWLT 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN ETH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG NT+ Sbjct: 243 YTNAETHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRNTN 302 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETK I L Sbjct: 303 EVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKMIKNL 362 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGT+GYEEAA QGL+AGIN+A K SR+D+YIGV+IDDL +KG EP Sbjct: 363 YTAGQINGTSGYEEAAGQGLMAGINAAGKVLNTGEKILSRSDAYIGVLIDDLVTKGTNEP 422 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G +LG I E R RF + Q+ + L + + Sbjct: 423 YRLLTSRAEYRLLLRHDNADLRLTDMGYELGMISEERYARFNEKRQQIDAEIKRLSDIRI 482 Query: 484 TSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 K T +Q G +R A + L P+ + + I + + ++ V E+++I Sbjct: 483 --KPNEHTQAIIEQHGGSRLKDGILAIDLLRRPEMTYDIILEILEEEHQLNADVEEQVEI 540 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 ++ Y Y + + + +++K E++ IP+D DYS + +L+ E +EKLS +KP N+ QAS+I Sbjct: 541 QTKYEGYINKSLQQVEKVKRMEEKKIPEDLDYSKIDSLATEAREKLSEVKPLNIAQASRI 600 Query: 599 EGMTPAALNLLLIYIKKNTVK 619 G+ PA +++LLIY+++ ++ Sbjct: 601 SGVNPADISILLIYLEQGKLQ 621 >gi|229106077|ref|ZP_04236690.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus Rock3-28] gi|228677343|gb|EEL31607.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus Rock3-28] Length = 629 Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust. Identities = 284/619 (45%), Positives = 393/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETTNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEDGVCKGVITQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETK I L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKNIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVILGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G ++G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEVGREIGLIKEERYERFTNKKLQIEQEKERLGSIIIK 486 Query: 485 SKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + S S +DG A + L P+ + +++ + P + S V E+++I+ Sbjct: 487 PRPEVQELIRSIGGSELKDGI--RASDLLRRPEMTYEHIHLLVPSEVELSDEVTEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS+I Sbjct: 545 TKYEGYIEKSLQQVERMKKMENKKIPVDIDYDAISSLASEARQKLKDVRPLSMGQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 605 GVNPADISILLVYIEQGKI 623 >gi|221202191|ref|ZP_03575226.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia multivorans CGD2M] gi|221208748|ref|ZP_03581747.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia multivorans CGD2] gi|221171380|gb|EEE03828.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia multivorans CGD2] gi|221177985|gb|EEE10397.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia multivorans CGD2M] Length = 656 Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust. Identities = 289/625 (46%), Positives = 389/625 (62%), Gaps = 15/625 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D AGIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q V Sbjct: 67 GGAMAAATDEAGIQFRILNSSKGPAVRATRAQADRILYKAAIRRRLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 127 DLMVEGDRVVGAVTQIGIRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQIECGIT 243 + GRLKTGTP R+DG+TI + K E+Q D IP FSF+ + +Q+ C +T Sbjct: 187 LKELKLPQGRLKTGTPPRIDGRTIDFSKLEEQPGDLDPIPVFSFLGRAEQHPQQLPCWVT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPEGL T+ Sbjct: 247 HTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPEGLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP ++Q + + ++ GLE+ +I+RPGYAIEYDY +P+ L +LETK I+GL Sbjct: 307 EFYPNGISTSLPFDVQLELVHSMRGLEQAHILRPGYAIEYDYFDPRALKASLETKAINGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+ R + D C R +Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGVNAGRYVQEKDAWCPRRDQAYLGVLVDDLVTRGVAEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F + + LK+ + Sbjct: 427 YRMFTSRAEYRLSLREDNADMRLTEIGRELGLVDDVRWDAFCRKRDAVSRETERLKTTWV 486 Query: 484 TSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----CPDARKFS------S 530 T K L ++++ K + E L P + + C A + + Sbjct: 487 TPKTLPPEEASALLGKPIDHEYSLAELLRRPGVDYDGVCGLKGGECGPAEPLADDPVLLA 546 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 + E+++I Y Y RQ E + E +P DY + LS E+ +KL+ +P Sbjct: 547 QIKEQVEIGIKYQGYIERQATEIERNDANENTRLPDGIDYREVRGLSFEVSQKLNQFRPE 606 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 + QAS+I G+TPAA++LL++++K+ Sbjct: 607 TIGQASRISGVTPAAISLLMVHLKR 631 >gi|330505867|ref|YP_004382736.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Pseudomonas mendocina NK-01] gi|328920153|gb|AEB60984.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas mendocina NK-01] Length = 631 Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust. Identities = 289/617 (46%), Positives = 387/617 (62%), Gaps = 5/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 8 FDVIVIGGGHAGTEAALAAARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 68 GGAMATATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAVREILENQANLWIFQQAAD 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + +V Q ++VVLTTGTFL G+IHIG GR GD PS +L + Sbjct: 128 DLIVENAEVKGVVTQMGLRFHANSVVLTTGTFLGGLIHIGLQNYSGGRAGDPPSIALAHR 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+DG+++ + +Q D SF+ + +QI C IT Sbjct: 188 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPTPLMSFLGKREHQPKQISCWITH 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF +++ HQ+F+EPEGL T Sbjct: 248 TNARTHEIIAANLDRSPMYSGVIEGVGPRYCPSIEDKIHRFADKDSHQVFIEPEGLTTHE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R+I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 308 LYPNGISTSLPFDVQLQVVRSIRGMENAHIMRPGYAIEYDYFDPRDLKYSLETKVIGGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ + C R ++YIGV++DDL + G EPY Sbjct: 368 FAGQINGTTGYEEAGAQGLLAGCNAALRAQGKEAWCPRRDEAYIGVLVDDLITLGTQEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 428 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDERWAAFEAKREGIAKEEQRLKSTWVR 487 Query: 485 SKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +I+ + Y L+ P+ L + +A + V E+++I++ Sbjct: 488 PGTPQGDAIAARFGTPLTHEYNLLNLLARPEIDYATLVELT-EAPVVDNQVAEQVEIKTK 546 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E +++ E +P+D DYS++ LS E++ KL +P L QA +I G+ Sbjct: 547 YAGYIDRQQDEIAKLRASEDTKLPEDLDYSAISGLSKEIQFKLGNTRPATLGQAGRIPGV 606 Query: 602 TPAALNLLLIYIKKNTV 618 TPAA++LLLI++KK + Sbjct: 607 TPAAISLLLIHLKKRSA 623 >gi|258423241|ref|ZP_05686133.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus A9635] gi|257846570|gb|EEV70592.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus A9635] gi|323439702|gb|EGA97420.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus O11] gi|323443275|gb|EGB00892.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus O46] Length = 625 Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust. Identities = 286/621 (46%), Positives = 396/621 (63%), Gaps = 7/621 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VREID Sbjct: 3 QEYDVIVIGAGHAGVEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVREID 62 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R I +ENL ++QG Sbjct: 63 ALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEENLHIMQGM 122 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E N + + + V++TTGTFLRG I +G +K +G PS +L Sbjct: 123 VDELIIEDNEVKGVRTNIGTEYLSKAVIITTGTFLRGEIILGNMKYSSGPNHQLPSITLS 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 ++ + FD R KTGTP R++ KTI + KTE Q D+ FSF T + Q+ C +T Sbjct: 183 DNLRELGFDIVRFKTGTPPRVNSKTIDYSKTEIQPGDDVGRAFSFETTEYILDQLPCWLT 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN ETH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG NT+ Sbjct: 243 YTNAETHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRNTN 302 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETK I L Sbjct: 303 EVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKMIKNL 362 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGT+GYEEAA QGL+AGIN+A K SR+D+YIGV+IDDL +KG EP Sbjct: 363 YTAGQINGTSGYEEAAGQGLMAGINAAGKVLNTGEKILSRSDAYIGVLIDDLVTKGTNEP 422 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G +LG I E R RF + Q+ + L + + Sbjct: 423 YRLLTSRAEYRLLLRHDNADLRLTDMGYELGMISEERYARFNEKRQQIDAEIKRLSDIRI 482 Query: 484 TSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 K T +Q G +R A + L P+ + + I + + ++ V E+++I Sbjct: 483 --KPNEHTQAIIEQHGGSRLKDGILAIDLLRRPEMTYDIILEILEEEHQLNADVEEQVEI 540 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 ++ Y Y + + + +++K E++ IP+D DYS + +L+ E +EKLS +KP N+ QAS+I Sbjct: 541 QTKYEGYINKSLQQVEKVKRMEEKKIPEDLDYSKIDSLATEAREKLSEVKPLNIAQASRI 600 Query: 599 EGMTPAALNLLLIYIKKNTVK 619 G+ PA +++LLIY+++ ++ Sbjct: 601 SGVNPADISILLIYLEQGKLQ 621 >gi|50302213|ref|XP_451040.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49640171|emb|CAH02628.1| KLLA0A00935p [Kluyveromyces lactis] Length = 686 Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust. Identities = 287/626 (45%), Positives = 407/626 (65%), Gaps = 23/626 (3%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 I S DV+V+G GHAGCEAAA +A+ GA T LIT IG+ SCNP++GG+GKG L+RE Sbjct: 41 IATSVDVVVVGAGHAGCEAAAGSARSGAETMLITPFLDKIGTCSCNPSMGGVGKGTLLRE 100 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DALDG+ +V D AGIQF++LN +G AV GPR Q DRELY MQ + + NL + Sbjct: 101 VDALDGVAAKVTDKAGIQFKMLNQSRGAAVWGPRAQIDRELYLKEMQNALQNYPNLTLFS 160 Query: 122 GEV----------AGFNTEKN-----IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGK 166 G+V F + N + +V+ ++ +I+CS VV++TGTFL IHIG Sbjct: 161 GKVKDVIIDHTLKVSFANDVNNRNFGDVRGVVLDNDEVIKCSKVVISTGTFLSAEIHIGL 220 Query: 167 LKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPF 226 IPAGR+G++P+ + ++ F GRLKTGTPARLDG+TI + EKQ+ D+ P Sbjct: 221 KTIPAGRIGEAPTYGISHTLKAAGFKLGRLKTGTPARLDGRTIDFTNLEKQYGDDPPYPM 280 Query: 227 SFMTDKITNR-QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRF 285 S+M ++++ + QI C TRT E H + N+ S +K GPRYCPS+E KI+RF Sbjct: 281 SYMNNEVSIKDQILCYGTRTTSELHDYLKLNLHQSIHIRETVK--GPRYCPSLEAKIIRF 338 Query: 286 GERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDY 345 +++ H+I+LEPEGLNTDV+YPNGIS ++PE++Q +R IPGLE V I++P Y +EYDY Sbjct: 339 SDKDSHRIWLEPEGLNTDVIYPNGISNSMPEDVQEIMMRMIPGLENVKILQPAYGVEYDY 398 Query: 346 INPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTD 405 ++P+EL TLETK I GL+LAGQINGTTGYEEA AQG+VAGIN+ + + SR+D Sbjct: 399 VDPRELKQTLETKLIDGLYLAGQINGTTGYEEACAQGVVAGINAGLSARGRPPLILSRSD 458 Query: 406 SYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFA 465 SY GV+IDDL +KGV EPYRMFTSR+E+R+++R DNAD RLT G KLG + E R +RF Sbjct: 459 SYTGVLIDDLITKGVEEPYRMFTSRSEFRVTVRADNADFRLTEKGKKLGVVSEERWQRFL 518 Query: 466 KYIQEYNFLRSLLKSLVLTSKNLSS-TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPD 524 Y L + LKS VL++ ++ K++ A++ + ++ +L PD Sbjct: 519 LDKTIYRELENTLKSYVLSNHKWDQLLDVAVGSTHKSQNAWDMFKFNGVTLDSLIKAIPD 578 Query: 525 ARKFSS----LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNEL 580 SS ++ ++ +E+ YA Y RQ K + +E L+P ++DY+ +P++S+E Sbjct: 579 LSIDSSEIPVHILLKINVEAKYAPYLKRQNQFIKAFQADENMLLPLNYDYTKIPSISSEC 638 Query: 581 KEKLSILKPFNLLQASKIEGMTPAAL 606 K L+ ++P + QA +I+GMTPA++ Sbjct: 639 KTILNTVQPATIGQARRIQGMTPASI 664 >gi|15925701|ref|NP_373235.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus Mu50] gi|15928296|ref|NP_375829.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus N315] gi|21284358|ref|NP_647446.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus MW2] gi|49484906|ref|YP_042130.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus MRSA252] gi|49487488|ref|YP_044709.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus MSSA476] gi|148269142|ref|YP_001248085.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus JH9] gi|150395224|ref|YP_001317899.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus JH1] gi|156981026|ref|YP_001443285.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus Mu3] gi|221141512|ref|ZP_03566005.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253316837|ref|ZP_04840050.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253733842|ref|ZP_04868007.1| glucose inhibited division protein A [Staphylococcus aureus subsp. aureus TCH130] gi|255007482|ref|ZP_05146083.2| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257793535|ref|ZP_05642514.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus A9781] gi|258420937|ref|ZP_05683871.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus A9719] gi|258438576|ref|ZP_05689799.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Staphylococcus aureus A9299] gi|258443968|ref|ZP_05692306.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Staphylococcus aureus A8115] gi|258446216|ref|ZP_05694376.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Staphylococcus aureus A6300] gi|258449125|ref|ZP_05697231.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Staphylococcus aureus A6224] gi|258454397|ref|ZP_05702365.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Staphylococcus aureus A5937] gi|282894276|ref|ZP_06302506.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus A8117] gi|282907044|ref|ZP_06314892.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus Btn1260] gi|282910023|ref|ZP_06317831.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus WW2703/97] gi|282912271|ref|ZP_06320067.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus WBG10049] gi|282918065|ref|ZP_06325815.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus D139] gi|282927747|ref|ZP_06335361.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus A10102] gi|283767787|ref|ZP_06340702.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Staphylococcus aureus subsp. aureus H19] gi|283959481|ref|ZP_06376922.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus A017934/97] gi|295406861|ref|ZP_06816665.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus A8819] gi|296275690|ref|ZP_06858197.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus MR1] gi|297209455|ref|ZP_06925853.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297245896|ref|ZP_06929758.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus A8796] gi|297589204|ref|ZP_06947845.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus MN8] gi|300911479|ref|ZP_07128928.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus TCH70] gi|304379945|ref|ZP_07362674.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|54037191|sp|P64230|MNMG_STAAN RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|54037192|sp|P64231|MNMG_STAAW RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|54041306|sp|P64229|MNMG_STAAM RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|56748944|sp|Q6G5W5|MNMG_STAAS RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|56748997|sp|Q6GD93|MNMG_STAAR RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|166200618|sp|A7X7A7|MNMG_STAA1 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|189039360|sp|A6U594|MNMG_STAA2 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|189039362|sp|A5IWD6|MNMG_STAA9 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|13702668|dbj|BAB43808.1| glucose inhibited division protein A [Staphylococcus aureus subsp. aureus N315] gi|14248486|dbj|BAB58873.1| glucose inhibited division protein A [Staphylococcus aureus subsp. aureus Mu50] gi|21205802|dbj|BAB96494.1| glucose inhibited division protein A [Staphylococcus aureus subsp. aureus MW2] gi|49243035|emb|CAG41769.1| glucose inhibited division protein A [Staphylococcus aureus subsp. aureus MRSA252] gi|49245931|emb|CAG44412.1| glucose inhibited division protein A [Staphylococcus aureus subsp. aureus MSSA476] gi|147742211|gb|ABQ50509.1| glucose inhibited division protein A [Staphylococcus aureus subsp. aureus JH9] gi|149947676|gb|ABR53612.1| glucose inhibited division protein A [Staphylococcus aureus subsp. aureus JH1] gi|156723161|dbj|BAF79578.1| glucose inhibited division protein A [Staphylococcus aureus subsp. aureus Mu3] gi|253728145|gb|EES96874.1| glucose inhibited division protein A [Staphylococcus aureus subsp. aureus TCH130] gi|257787507|gb|EEV25847.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus A9781] gi|257843127|gb|EEV67542.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus A9719] gi|257848135|gb|EEV72127.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Staphylococcus aureus A9299] gi|257850852|gb|EEV74796.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Staphylococcus aureus A8115] gi|257855042|gb|EEV77985.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Staphylococcus aureus A6300] gi|257857558|gb|EEV80453.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Staphylococcus aureus A6224] gi|257863491|gb|EEV86251.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Staphylococcus aureus A5937] gi|269942297|emb|CBI50712.1| glucose inhibited division protein A [Staphylococcus aureus subsp. aureus TW20] gi|282318350|gb|EFB48710.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus D139] gi|282323967|gb|EFB54283.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus WBG10049] gi|282326089|gb|EFB56394.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus WW2703/97] gi|282329943|gb|EFB59464.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus Btn1260] gi|282590507|gb|EFB95585.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus A10102] gi|282763321|gb|EFC03451.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus A8117] gi|283461666|gb|EFC08750.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Staphylococcus aureus subsp. aureus H19] gi|283789073|gb|EFC27900.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus A017934/97] gi|285818374|gb|ADC38861.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus 04-02981] gi|294968326|gb|EFG44351.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus A8819] gi|296885916|gb|EFH24851.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297177261|gb|EFH36514.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus A8796] gi|297577715|gb|EFH96428.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus MN8] gi|300887658|gb|EFK82854.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus TCH70] gi|302752588|gb|ADL66765.1| glucose inhibited division protein A [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304341525|gb|EFM07435.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312436862|gb|ADQ75933.1| glucose inhibited division protein A [Staphylococcus aureus subsp. aureus TCH60] gi|312831049|emb|CBX35891.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315129540|gb|EFT85532.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus CGS03] gi|315195223|gb|EFU25611.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus CGS00] gi|329315431|gb|AEB89844.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Staphylococcus aureus subsp. aureus T0131] gi|329725763|gb|EGG62242.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus 21172] Length = 625 Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust. Identities = 286/621 (46%), Positives = 396/621 (63%), Gaps = 7/621 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VREID Sbjct: 3 QEYDVIVIGAGHAGVEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVREID 62 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R I +ENL ++QG Sbjct: 63 ALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEENLHIMQGM 122 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E N + + + V++TTGTFLRG I +G +K +G PS +L Sbjct: 123 VDELIIEDNEVKGVRTNIGTEYLSKAVIITTGTFLRGEIILGNMKYSSGPNHQLPSITLS 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 ++ + FD R KTGTP R++ KTI + KTE Q D+ FSF T + Q+ C +T Sbjct: 183 DNLRELGFDIVRFKTGTPPRVNSKTIDYSKTEIQPGDDVGRAFSFETTEYILDQLPCWLT 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN ETH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG NT+ Sbjct: 243 YTNAETHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRNTN 302 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETK I L Sbjct: 303 EVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKMIKNL 362 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGT+GYEEAA QGL+AGIN+A K SR+D+YIGV+IDDL +KG EP Sbjct: 363 YTAGQINGTSGYEEAAGQGLMAGINAAGKVLNTGEKILSRSDAYIGVLIDDLVTKGTNEP 422 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G +LG I E R RF + Q+ + L + + Sbjct: 423 YRLLTSRAEYRLLLRHDNADLRLTDMGYELGMISEERYARFNEKRQQIDAEIKRLSDIRI 482 Query: 484 TSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 K T +Q G +R A + L P+ + + I + + ++ V E+++I Sbjct: 483 --KPNEHTQAIIEQHGGSRLKDGILAIDLLRRPEMTYDIILEILEEEHQLNADVEEQVEI 540 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 ++ Y Y + + + +++K E++ IP+D DYS + +L+ E +EKLS +KP N+ QAS+I Sbjct: 541 QTKYEGYINKSLQQVEKVKRMEEKKIPEDLDYSKIDSLATEAREKLSEVKPLNIAQASRI 600 Query: 599 EGMTPAALNLLLIYIKKNTVK 619 G+ PA +++LLIY+++ ++ Sbjct: 601 SGVNPADISILLIYLEQGKLQ 621 >gi|82752289|ref|YP_418030.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus RF122] gi|123549493|sp|Q2YZB9|MNMG_STAAB RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|82657820|emb|CAI82275.1| glucose inhibited division protein A [Staphylococcus aureus RF122] Length = 625 Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust. Identities = 286/621 (46%), Positives = 396/621 (63%), Gaps = 7/621 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VREID Sbjct: 3 QEYDVIVIGAGHAGVEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVREID 62 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R I +ENL ++QG Sbjct: 63 ALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEENLHIMQGM 122 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E N + + + V++TTGTFLRG I +G +K +G PS +L Sbjct: 123 VDELIIEDNEVKGVRTNIGTEYLSKAVIITTGTFLRGEIILGNMKYSSGPNHQLPSITLS 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 ++ + FD R KTGTP R++ KTI + KTE Q D+ FSF T + Q+ C +T Sbjct: 183 DNLRELGFDIVRFKTGTPPRVNSKTIDYSKTEIQPGDDVGRAFSFETTEYILDQLPCWLT 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN ETH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG NT+ Sbjct: 243 YTNAETHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRNTN 302 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETK I L Sbjct: 303 EVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKMIKNL 362 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGT+GYEEAA QGL+AGIN+A K SR+D+YIGV+IDDL +KG EP Sbjct: 363 YTAGQINGTSGYEEAAGQGLMAGINAAGKVLNTGEKILSRSDAYIGVLIDDLVTKGTNEP 422 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G +LG I E R RF + Q+ + L + + Sbjct: 423 YRLLTSRAEYRLLLRHDNADLRLTDMGYELGMISEERYARFNEKRQQIDAEIKRLSDIRI 482 Query: 484 TSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 K T +Q G +R A + L P+ + + I + + ++ V E+++I Sbjct: 483 --KPNEHTQAIIEQHGGSRLKDGILAIDLLRRPEMTYDIILEILEEEHQLNADVEEQVEI 540 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 ++ Y Y + + + +++K E++ IP+D DYS + +L+ E +EKLS +KP N+ QAS+I Sbjct: 541 QTKYEGYINKSLQQVEKVKRMEEKKIPEDLDYSKIDSLATEAREKLSEVKPLNIAQASRI 600 Query: 599 EGMTPAALNLLLIYIKKNTVK 619 G+ PA +++LLIY+++ ++ Sbjct: 601 SGVNPADISILLIYLEQGKLQ 621 >gi|75761489|ref|ZP_00741453.1| Putative tRNA (5-carboxymethylaminomethyl-2-thiouridylate) synthase subunit GidA [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218900624|ref|YP_002449035.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus G9842] gi|228905427|ref|ZP_04069382.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis IBL 4222] gi|228968635|ref|ZP_04129618.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis serovar sotto str. T04001] gi|74491028|gb|EAO54280.1| Putative tRNA (5-carboxymethylaminomethyl-2-thiouridylate) synthase subunit GidA [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218545582|gb|ACK97976.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus G9842] gi|228791064|gb|EEM38682.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis serovar sotto str. T04001] gi|228854247|gb|EEM98950.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis IBL 4222] Length = 629 Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust. Identities = 285/622 (45%), Positives = 394/622 (63%), Gaps = 13/622 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + +V Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEDGMCKGVVTQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRSFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVVLGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G ++G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEVGREIGLIKEERYERFTNKKLQIEQEKERLSSIIIK 486 Query: 485 S--------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 +N+ + + +DG A + L P+ + +++ + P + S V E++ Sbjct: 487 PRPEVQELIRNIGGSEL---KDGI--RASDLLRRPEMTYEHIHLLVPSEVELSDEVTEQV 541 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS Sbjct: 542 EIQIKYEGYIEKSLQQVERMKKMESKKIPVDIDYDAISSLASEARQKLKDVRPLSMGQAS 601 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+ PA +++LL+YI++ + Sbjct: 602 RISGVNPADISILLVYIEQGKI 623 >gi|203287637|ref|YP_002222652.1| glucose inhibited division protein A [Borrelia recurrentis A1] gi|201084857|gb|ACH94431.1| glucose inhibited division protein A [Borrelia recurrentis A1] Length = 626 Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust. Identities = 288/624 (46%), Positives = 402/624 (64%), Gaps = 9/624 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 I +D IVIGGGHAG EA+ A+L T LIT T+G +SCNPAIGGL KG++VRE Sbjct: 5 IGMDFDAIVIGGGHAGIEASLALARLNFKTILITQNLDTVGKLSCNPAIGGLAKGNMVRE 64 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G MG + D + IQFR+LN KGPAV+ PR QAD+ +Y++ + + Q NL++ Q Sbjct: 65 IDALGGEMGCLVDFSMIQFRILNKSKGPAVQAPRAQADKLVYQIKAKETLEMQNNLELFQ 124 Query: 122 GEVAGF--NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 V+ F N KN I +V + + VVLTTGTFLRG I IG+ K GR+ + + Sbjct: 125 DTVSDFLLNPMKNKIEGVVTERGNKFTSRVVVLTTGTFLRGKIFIGEYKAYMGRISEPAA 184 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIE 239 L ++ F+ GRLKTGTPAR+ ++I + KTE QF D +IPFSF KI Q+ Sbjct: 185 FGLEKILLELGFEMGRLKTGTPARVHRRSINFAKTEIQFGDSDIIPFSFSNTKIDKTQLS 244 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +T TN +TH II EN+ S +YSG+I GPRYCPSIEDKIV+F +++ HQIF+EPEG Sbjct: 245 CYVTYTNKKTHEIISENMHLSPLYSGEIVGNGPRYCPSIEDKIVKFKDKDKHQIFIEPEG 304 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 +NT +Y NG+S++LPE++Q + I +I GLE I R GYA+EYDYINP EL+ +LETK+ Sbjct: 305 INTQEMYLNGLSSSLPEDVQKRLINSIDGLEDAVITRSGYAVEYDYINPIELYASLETKR 364 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 + GLF+AGQ NG++GYEEAAAQGL+AGIN+A K K + + RT SYIGV+IDDL +KG Sbjct: 365 VEGLFVAGQTNGSSGYEEAAAQGLMAGINAALKLQKKEPMILPRTSSYIGVLIDDLVTKG 424 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAE+R++LR D +D RL G ++G + E + R+ ++ ++ LL+ Sbjct: 425 TKEPYRMFTSRAEHRLNLRHDTSDKRLIKWGYEVGLVSEEKYSRYFFKEKQIEEIKELLR 484 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 L K SS + + + Y + P ++++L +I P S +++E+++++ Sbjct: 485 HRRLKEKEASSFEL---KRHINKDFYHIVKDPYINLKDLVNIDPKLNA-SKVILEQVELD 540 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ +++ E +P DF+Y + LS E +EK ++P NL QAS++ Sbjct: 541 IKYEGYINRQKDLIRKMNNLELIKLPLDFNY-EIDGLSREAREKFVKIQPANLAQASRVS 599 Query: 600 GMTPAALNLLLIYIK--KNTVKLN 621 G+ + +LLIY KN V LN Sbjct: 600 GVRNTDIQVLLIYFSNPKNKVVLN 623 >gi|21229855|ref|NP_635772.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66766732|ref|YP_241494.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Xanthomonas campestris pv. campestris str. 8004] gi|24636867|sp|Q8PDG1|MNMG_XANCP RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|81170591|sp|Q4UZP9|MNMG_XANC8 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|21111356|gb|AAM39696.1| glucose inhibited division protein A [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66572064|gb|AAY47474.1| glucose inhibited division protein A [Xanthomonas campestris pv. campestris str. 8004] Length = 634 Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust. Identities = 290/630 (46%), Positives = 396/630 (62%), Gaps = 30/630 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAG EAA AA+ GA T L+TH T+G+MSCNPAIGG+GKGHLV+EIDAL Sbjct: 8 YDVIVIGGGHAGTEAALAAARAGARTLLLTHNIETVGAMSCNPAIGGIGKGHLVKEIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + AD AGIQ+R LN KGPAVR R QADR LYR A++R + +Q NL V Q V Sbjct: 68 GGAMAKAADLAGIQWRTLNASKGPAVRATRCQADRNLYRSAIRRIVEAQPNLTVFQAAVD 127 Query: 126 GF-----NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 E + + ++ Q + VVLT GTFL G IH+G+ + AGRMGD P+ Sbjct: 128 DLIIHNGAAEGDSVRGVITQTGLRFEATAVVLTAGTFLAGKIHVGETQYAAGRMGDPPAT 187 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM---TDKITNRQ 237 +L + F RLKTGTP R+DG+T+ + ++Q D+ L SFM +D T Q Sbjct: 188 TLAARLRERPFAIDRLKTGTPPRIDGRTLDYTMMDEQPGDDPLPVMSFMGQVSDHPT--Q 245 Query: 238 IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 + C IT T +TH II + S +YSG I+ GPRYCPSIEDK+VRF ++ HQIF+EP Sbjct: 246 VSCWITHTTEQTHDIIRGALHRSPLYSGQIEGIGPRYCPSIEDKVVRFADKTSHQIFVEP 305 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EGL+ +YPNGIST+LP ++Q +R+I G + +I RPGYAIEYD+ +P+ L +LET Sbjct: 306 EGLDVTEIYPNGISTSLPFDVQLALVRSIRGFAQAHITRPGYAIEYDFFDPRGLKASLET 365 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 K + GLF AGQINGTTGYEEAAAQGL+AG+N+AR++ L R ++Y+GV++DDL + Sbjct: 366 KAVGGLFFAGQINGTTGYEEAAAQGLLAGLNAARQAQALPAWSPRRDEAYLGVLVDDLIT 425 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL 477 G EPYRMFTSRAEYR+ LR DNAD RLT +G +G + + R RF+ + + Sbjct: 426 HGTTEPYRMFTSRAEYRLQLREDNADLRLTGVGRAMGLVDDARWARFSSKQEAVQRETAR 485 Query: 478 LKSLVLTSKN------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI------CPDA 525 L +L T N + + + ++ + + P+ S L + DA Sbjct: 486 LSALWATPGNALGREVVDTLGVPMSRETNV---LDLIKRPELSYAALMRVPTLGPGVDDA 542 Query: 526 RKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 + V E+++I YA Y RQ E + E IP+ FDY+ + LS E+++KL Sbjct: 543 Q-----VAEQVEIGVKYAGYLNRQRDEIARQQRHETTPIPEGFDYAGVRGLSMEVQQKLE 597 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 ++P ++ QA +I GMTPAA++LLL+++++ Sbjct: 598 RVRPQSIGQAQRIPGMTPAAISLLLVHLER 627 >gi|113972263|ref|YP_736056.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shewanella sp. MR-4] gi|114049512|ref|YP_740062.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shewanella sp. MR-7] gi|123129966|sp|Q0HD68|MNMG_SHESM RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|123325561|sp|Q0HPF0|MNMG_SHESR RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|113886947|gb|ABI40999.1| glucose inhibited division protein A [Shewanella sp. MR-4] gi|113890954|gb|ABI45005.1| glucose inhibited division protein A [Shewanella sp. MR-7] Length = 629 Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust. Identities = 297/620 (47%), Positives = 388/620 (62%), Gaps = 15/620 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA++G+ T L+TH T+G MSCNPAIGG+GKGHLV+EIDAL Sbjct: 7 FDVIVVGGGHAGTEAALAAARMGSKTLLLTHNLDTLGQMSCNPAIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D AGIQFR LN KGPAVR R QADR LYR +Q + +Q NL + Q V Sbjct: 67 GGAMAIATDYAGIQFRTLNSSKGPAVRATRAQADRALYRQKIQNILQNQPNLRIFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + ++ Q VVLT GTFL G IHIG GR GD PS +L + Sbjct: 127 DLVVENDRVVGVITQMGLAFEAPAVVLTAGTFLSGKIHIGLENYSGGRAGDPPSIALAHR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D TI + + +Q D L SFM D + +QI C IT Sbjct: 187 LRELPIRVGRLKTGTPPRIDANTIDFTQMTEQKGDTPLPVMSFMGDVSHHPKQISCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH II + S +YSG I+ GPRYCPSIEDKI RF +++ HQIF+EPEGLNT+ Sbjct: 247 TNEKTHDIIRGGLDRSPMYSGVIEGIGPRYCPSIEDKIHRFSDKSSHQIFIEPEGLNTNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q +R+I G+E I+RPGYAIEYDY +P++L +LETK I+GLF Sbjct: 307 IYPNGISTSLPFDVQLNLVRSIQGMENAEIVRPGYAIEYDYFDPRDLKNSLETKTINGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG+N+A + + C R ++YIGV++DDL++ G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGMNAALQVQGKEAWCPRRDEAYIGVLVDDLSTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQ----EYNFLRSLL-- 478 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F++ ++ E LRS Sbjct: 427 RMFTSRAEYRLLLREDNADLRLTAKGRELGLVDDARWASFSEKLESIELELQRLRSQWIH 486 Query: 479 --KSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIER 535 LV +T IS + + E L P+ L I + L E+ Sbjct: 487 PNSPLVPVLNPHLNTPIS-----REASFEELLRRPEMDYSKLMQIEGFGPGLADPLAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 +QI+ Y+ Y RQ E + E +P + DY +P LSNE+ KL+ KP + QA Sbjct: 542 VQIQVKYSGYIQRQQEEINKAVRNENTGLPLNLDYKEVPGLSNEVIAKLNSHKPETIGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G+TPAA+++LL+++KK Sbjct: 602 SRISGITPAAISILLVHLKK 621 >gi|229164434|ref|ZP_04292362.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus R309803] gi|228619039|gb|EEK75937.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus R309803] Length = 629 Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust. Identities = 284/619 (45%), Positives = 394/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEDGECKGVITQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVVLGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G ++G I + R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEVGREIGLIKDERYERFTNKKLQIEQEKERLSSIIIK 486 Query: 485 SKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + +T S +DG A + L P+ + +++ + P + S V E+++I+ Sbjct: 487 PRPEVQELIRNTGGSELKDGI--RASDLLRRPEMTYEHIHLLVPSEVELSDEVTEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + + +K E + IP+D DY ++ +L++E ++KL ++P ++ QAS+I Sbjct: 545 IKYEGYIEKSLQQVERMKKMENKKIPEDIDYDAISSLASEARQKLKDVRPLSMGQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 605 GVNPADISILLVYIEQGKI 623 >gi|152998468|ref|YP_001343303.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Marinomonas sp. MWYL1] gi|189039345|sp|A6W3T9|MNMG_MARMS RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|150839392|gb|ABR73368.1| glucose inhibited division protein A [Marinomonas sp. MWYL1] Length = 629 Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust. Identities = 296/620 (47%), Positives = 393/620 (63%), Gaps = 9/620 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA++G T L++H T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FDVIVVGGGHAGTEAALAAARMGVKTLLLSHNIETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DG M D AGIQFR LN +KGPAVR R QADR LY+ A++ ++ +QENL + Q Sbjct: 67 DGAMALATDQAGIQFRTLNSRKGPAVRATRAQADRILYKAAIRHKLENQENLWLFQQSAE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E ++ Q TVVLT GTFL GVIHIG GR GD PS L Sbjct: 127 DLIVENGAARGVITQTGIRFNSKTVVLTAGTFLGGVIHIGLENHSGGRAGDPPSIGLAQK 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 F RLKTGTP R+D +++ + + + Q D+ S+M ++ + RQIEC IT Sbjct: 187 LRALPFRVDRLKTGTPPRIDARSVDFSQMQAQPGDDIDPVMSYMGNRAMHPRQIECFITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II + S +Y+G I+ GPRYCPSIEDKIVRF ++N HQIF+EPEGL T Sbjct: 247 TNERTHDIIRAGMDRSPMYTGVIEGVGPRYCPSIEDKIVRFADKNSHQIFIEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q + +R++ G+E +IIRPGYAIEYDY NP++L +LETK + GLF Sbjct: 307 LYPNGISTSLPFDVQIELVRSMKGMENAHIIRPGYAIEYDYFNPQDLKYSLETKHMPGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG+N+A + + D R ++Y+GV++DDL S G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGLNAALLAQEKDAWTPRRDEAYLGVLVDDLISMGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F K + L+S + Sbjct: 427 RMFTSRAEYRLILREDNADMRLTEKGRELGLVSDERWAAFCKKREAIELETQRLRSSWIV 486 Query: 485 SKNLSSTSISFKQDGKTRTAY---EFLSYPDF---SIQNLFSICPDARKFSSLVIERLQI 538 + SI+ K + Y + L P+ I NL + + V E++QI Sbjct: 487 PNTPEADSINPKLETPITHEYSLLDLLKRPNIVYSDIANLKNGLDEP--VDEQVSEQVQI 544 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 YA Y RQ + + ++ +E +P D DYS + LSNE+K+KL+ L+P L AS+I Sbjct: 545 AVKYAGYISRQAEDIERLRRQENTELPDDLDYSKMEGLSNEIKQKLTQLRPATLAAASRI 604 Query: 599 EGMTPAALNLLLIYIKKNTV 618 +G+TPAA++LLLI++KK + Sbjct: 605 QGVTPAAVSLLLIHLKKRAI 624 >gi|229099910|ref|ZP_04230833.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus Rock3-29] gi|229118973|ref|ZP_04248318.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus Rock1-3] gi|228664498|gb|EEL19994.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus Rock1-3] gi|228683525|gb|EEL37480.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus Rock3-29] Length = 629 Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust. Identities = 284/619 (45%), Positives = 393/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEDGVCKGVITQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETK I L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKNIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVILGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G ++G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEVGREIGLIKEERYERFTNKKLQIEQEKERLGSIIIK 486 Query: 485 SKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + S S +DG A + L P+ + +++ + P + S V E+++I+ Sbjct: 487 PRPEVQELIRSIGGSELKDGI--RASDLLRRPEMTYEHIHLLVPSEVELSDEVTEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS+I Sbjct: 545 TKYEGYIEKSLQQVERMKKMENKKIPVDIDYDAISSLASEARQKLKDVRPLSMGQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 605 GVNPADISILLVYIEQGKI 623 >gi|325525645|gb|EGD03419.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia sp. TJI49] Length = 656 Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust. Identities = 289/625 (46%), Positives = 388/625 (62%), Gaps = 15/625 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q V Sbjct: 67 GGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRILYKAAIRRRLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 127 DLMVEGDRVVGAVTQIGIRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQIECGIT 243 + GRLKTGTP R+DG+TI + K E+Q D IP FSF+ + +Q+ C +T Sbjct: 187 LKELKLPQGRLKTGTPPRIDGRTIDFSKLEEQPGDLDPIPVFSFLGRAEQHPQQLPCWVT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPEGL T+ Sbjct: 247 HTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPEGLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP ++Q + + ++ GLE +I+RPGYAIEYDY +P+ L +LETK I+GL Sbjct: 307 EFYPNGISTSLPFDVQLELVHSMRGLENAHILRPGYAIEYDYFDPRALKASLETKAINGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+ R + D C R +Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGLNAGRYVQEKDAWCPRRDQAYLGVLVDDLVTRGVAEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F + + LK+ + Sbjct: 427 YRMFTSRAEYRLSLREDNADMRLTEIGRELGLVDDVRWDAFCRKRDAVSRETERLKTTWV 486 Query: 484 TSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----CPDARKFS------S 530 T K L +T++ K + E L P + + + C A + + Sbjct: 487 TPKTLPPEEATALLGKAIDHEYSLAELLRRPGITYDGVCGLKGGECGPAEPLADDPVLLA 546 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 + E+++I Y Y RQ E + E +P DY + LS E+ +KL+ +P Sbjct: 547 QIKEQVEIGIKYQGYIERQATEIERNDANENTRLPDGIDYREVRGLSFEVSQKLNQFRPE 606 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 + QAS+I G+TPAA++LL++++K+ Sbjct: 607 TIGQASRISGVTPAAISLLMVHLKR 631 >gi|258411159|ref|ZP_05681438.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Staphylococcus aureus A9763] gi|257840044|gb|EEV64509.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Staphylococcus aureus A9763] Length = 625 Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust. Identities = 286/621 (46%), Positives = 396/621 (63%), Gaps = 7/621 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VREID Sbjct: 3 QEYDVIVIGAGHAGVEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVREID 62 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R I +ENL ++QG Sbjct: 63 ALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEENLHIMQGM 122 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E N + + + V++TTGTFLRG I +G +K +G PS +L Sbjct: 123 VDELIIEDNEVKGVRTNIGTEYLSKAVIITTGTFLRGEIILGNMKYSSGPNHQLPSITLS 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 ++ + FD R KTGTP R++ KTI + KTE Q D+ FSF T + Q+ C +T Sbjct: 183 DNLRELGFDIVRFKTGTPPRVNSKTIDYSKTEIQPGDDVGRAFSFETTEYILDQLPCWLT 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN ETH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG NT+ Sbjct: 243 YTNAETHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRNTN 302 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETK I L Sbjct: 303 EVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKMIKNL 362 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGT+GYEEAA QGL+AGIN+A K SR+D+YIGV+IDDL +KG EP Sbjct: 363 YTAGQINGTSGYEEAAGQGLMAGINAAGKVLNTGEKILSRSDAYIGVLIDDLVTKGTNEP 422 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G +LG I E R RF + Q+ + L + + Sbjct: 423 YRLLTSRAEYRLLLRHDNADLRLTDMGYELGMISEERYARFNEKRQQIDAEIKRLSDIRI 482 Query: 484 TSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 K T +Q G +R A + L P+ + + I + + ++ V E+++I Sbjct: 483 --KPNEHTQAIIEQHGGSRLKDGILAIDLLRRPEMTYDIVLEILEEEHQLNADVEEQVEI 540 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 ++ Y Y + + + +++K E++ IP+D DYS + +L+ E +EKLS +KP N+ QAS+I Sbjct: 541 QTKYEGYINKSLQQVEKVKRMEEKKIPEDLDYSKIDSLATEAREKLSEVKPLNIAQASRI 600 Query: 599 EGMTPAALNLLLIYIKKNTVK 619 G+ PA +++LLIY+++ ++ Sbjct: 601 SGVNPADISILLIYLEQGKLQ 621 >gi|107104666|ref|ZP_01368584.1| hypothetical protein PaerPA_01005745 [Pseudomonas aeruginosa PACS2] Length = 620 Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust. Identities = 290/610 (47%), Positives = 379/610 (62%), Gaps = 5/610 (0%) Query: 10 VIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLM 69 +IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL G M Sbjct: 1 MIGGGHAGTEAALAAARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDALGGAM 60 Query: 70 GRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNT 129 D GIQFR+LN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 61 AEATDKGGIQFRILNSRKGPAVRATRAQADRVLYKAAIRHTLENQPNLWIFQQACDDLIV 120 Query: 130 EKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKF 189 E++ + +V Q VVLTTGTFL G+IHIG GR GD PS +L + Sbjct: 121 EQDQVRGVVTQMGLRFHADNVVLTTGTFLGGLIHIGLENYSGGRAGDPPSIALARRLREL 180 Query: 190 DFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITRTNLE 248 GRLKTGTP R+DG+++ + +Q D + SF+ K + Q+ C IT TN Sbjct: 181 PLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGSKEQHPEQVSCWITHTNAR 240 Query: 249 THRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPN 308 TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+FLEPEGL T +YPN Sbjct: 241 THEIIAANLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFLEPEGLTTHELYPN 300 Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQ 368 GIST+LP ++Q Q +R+I G+E +I+RPGYAIEYD+ +P++L +LETK I GLF AGQ Sbjct: 301 GISTSLPFDVQLQIVRSIRGMENAHIVRPGYAIEYDFFDPRDLRYSLETKVIGGLFFAGQ 360 Query: 369 INGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFT 428 INGTTGYEEA AQGL+AG N+A +S D C R ++YIGV++DDL + G EPYRMFT Sbjct: 361 INGTTGYEEAGAQGLLAGANAALRSQGKDSWCPRRDEAYIGVLVDDLITLGTQEPYRMFT 420 Query: 429 SRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNL 488 SRAEYR+ LR DNAD RLT G +LG + +RR F + LKS + Sbjct: 421 SRAEYRLILREDNADLRLTEKGRELGLVDDRRWAAFEAKREGIEREEQRLKSTWVRPNTP 480 Query: 489 SSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAY 545 +I+ + Y LS P+ L I DA + V E+++I + YA Y Sbjct: 481 QGDAIAERFGTPLTHEYNLLNLLSRPEIDYAGLVEITGDAVD-NPQVAEQVEIRTKYAGY 539 Query: 546 TGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAA 605 RQ E ++ E +P D DY + LS E++ KL+ +P L QAS+I G+TPAA Sbjct: 540 IDRQQEEISRLRASEDTRLPVDIDYLGISGLSKEIQNKLNQARPETLGQASRIPGVTPAA 599 Query: 606 LNLLLIYIKK 615 ++LLLI++KK Sbjct: 600 ISLLLIHLKK 609 >gi|289620137|emb|CBI53581.1| unnamed protein product [Sordaria macrospora] Length = 717 Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust. Identities = 288/629 (45%), Positives = 396/629 (62%), Gaps = 14/629 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R +DV+VIGGGHAG EA A AA+ GA TAL+T +G SCNP+ GG+GKG ++REID Sbjct: 40 RPFDVVVIGGGHAGSEACAAAARAGARTALVTPSVENLGVCSCNPSFGGIGKGIMIREID 99 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL+GL GR+ D AG+QFRVLN KKGPAV GPR Q DR LY+ M+ E+ S NL ++ Sbjct: 100 ALEGLAGRIIDKAGVQFRVLNSKKGPAVWGPRAQIDRALYKKHMRAELESYPNLSLVYNS 159 Query: 124 VAGFNTEKN---------IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRM 174 V+ +N I+ + ++ ++ S V++TTGTFL G IHIG P+GRM Sbjct: 160 VSDIVVSENDDPSTGAKTKITGVRLESGEVLPTSQVIITTGTFLGGEIHIGMEAYPSGRM 219 Query: 175 GDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT 234 G+ + L S + F GRLKTGTP RLD K+I + E+Q+ D+ PFS++ D +T Sbjct: 220 GEKATFGLSKSLREAGFKLGRLKTGTPPRLDKKSINFGVLEEQYGDDPPRPFSYLNDAVT 279 Query: 235 NR-QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQI 293 + Q+ C T TN TH I+ +N+ + +K GPRYCPS+E KI+RF ++ H + Sbjct: 280 VKDQLHCWATYTNHATHEIVRQNLDKTIHIRETVK--GPRYCPSLEAKIIRFSDKQRHLV 337 Query: 294 FLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFP 353 +LEPEG + D++YPNG+S +P E Q +RTIPGLE V + +PGY +EYDY++P+ L Sbjct: 338 WLEPEGFDNDIIYPNGLSMTVPAEAQLALLRTIPGLEDVIMTQPGYGVEYDYVDPRSLKR 397 Query: 354 TLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMID 413 TLETK I GL+LAGQINGTTGYEEAA QG+VAGIN+ R + + + SR D YIGVMID Sbjct: 398 TLETKAIRGLWLAGQINGTTGYEEAAGQGIVAGINAGRAAIGREPVTLSRADGYIGVMID 457 Query: 414 DLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNF 473 DL +KGV EPYRMFTSR+E+R++ R DNAD+RLT +G G +G+RR F + Sbjct: 458 DLITKGVSEPYRMFTSRSEFRMTTRSDNADSRLTALGRSWGVVGDRRWSHFQTENGQMAE 517 Query: 474 LRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLF--SICPDARKFSSL 531 LR +L +L+ + ++ K D + R+A+E L + S++ L + P FS Sbjct: 518 LRRILSETILSPQAWANAGFDVKADTRKRSAFELLCFKGVSMEKLHESGVVPKLMDFSER 577 Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 V ER IE YA + +E +++ EE +P D DY ++ LS K L +P + Sbjct: 578 VRERTFIEGLYAPQIDKHALERAKLEREEDLRLPLDLDYDAIINLSLAEKGVLKATRPES 637 Query: 592 LLQASKIEGMTPAALNLLLIYIKKNTVKL 620 L QA +IEGMTPA LL ++K+ +L Sbjct: 638 LAQARRIEGMTPAGCMRLLAHVKRRNGEL 666 >gi|153838485|ref|ZP_01991152.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio parahaemolyticus AQ3810] gi|149748108|gb|EDM58967.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio parahaemolyticus AQ3810] Length = 631 Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust. Identities = 293/624 (46%), Positives = 388/624 (62%), Gaps = 11/624 (1%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA +A+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHENFDVIVVGGGHAGTEAALASARTGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAEAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRNALENAPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E++ + +V Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQSVDDLIVEQDRVVGVVTQMGLKFHAKAVVLTVGTFLGGKIHIGMESSSGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D +T+ + E Q D FSFM + + RQI Sbjct: 182 ALADRLRELPFRVDRLKTGTPPRIDARTVDFSVLEAQHGDNPTPVFSFMGKREHHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CFITHTNEQTHEVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTHELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 IRGLFFAGQINGTTGYEEAAAQGLMAGLNASLYSQGKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG I + R RF + I+ R LK Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLIDDVRWARFNEKIENMETERQRLK 481 Query: 480 SLVLTSKNLSSTSIS-FKQDGKTRTAYE-----FLSYPDFSIQNLFSICPDARKF-SSLV 532 S T N +S I + KT A E L P+ S L + A Sbjct: 482 S---TWVNPNSAGIDELNKLLKTPMAREASGEDLLRRPEISYSQLTQLDAFAPALEDQQA 538 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 E+++I+ Y Y RQ E ++ E +P D DY + LSNE+ KLS KP ++ Sbjct: 539 AEQVEIQVKYDGYIKRQQEEIEKSLRHEHTKLPVDLDYKDVKGLSNEVVAKLSEAKPESI 598 Query: 593 LQASKIEGMTPAALNLLLIYIKKN 616 AS+I G+TPAA+++LL+++KK+ Sbjct: 599 GIASRISGITPAAISILLVHLKKH 622 >gi|262198171|ref|YP_003269380.1| glucose inhibited division protein A [Haliangium ochraceum DSM 14365] gi|262081518|gb|ACY17487.1| glucose inhibited division protein A [Haliangium ochraceum DSM 14365] Length = 640 Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust. Identities = 284/626 (45%), Positives = 396/626 (63%), Gaps = 19/626 (3%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+G GHAGCEAA +A+LGA T ++T + MSCNPAIGG+ KGH+V+EIDA Sbjct: 7 SYDVIVVGAGHAGCEAALASARLGARTLVLTGNLEMVAQMSCNPAIGGVAKGHIVKEIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M ++ D GIQ+R LN+ KGPAVR R QAD+ LYR M++ + +Q L + Q EV Sbjct: 67 LGGQMAQIIDRTGIQYRRLNLSKGPAVRSTRAQADKRLYRETMRQALDAQAGLYLRQAEV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + E I + + R V+LTTGTFLRG I++G + GR G++PS L Sbjct: 127 SELLVEDGAIRGVGTKMGVSFRARAVILTTGTFLRGRIYVGDARAEGGRAGEAPSVGLSQ 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR---QIECG 241 S F RLKTGTP RLDG+T+ +Q D+ F+ + + Q +C Sbjct: 187 SLAANGFPLARLKTGTPCRLDGRTLDLAGLTRQPGDDPPPMFTNLAETGVAPPLPQHDCW 246 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T T ETHRII ++I S ++ G I+ GPRYCPSIEDK+VRF +R HQ+FLEPEG++ Sbjct: 247 LTYTTPETHRIIRDSIHRSPLHQGIIEGVGPRYCPSIEDKVVRFADRERHQVFLEPEGVD 306 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 + YPNGIST+LP ++Q +RTIPGLE+ + RPGYA+EYD+++P+EL PTLET+++ Sbjct: 307 SREFYPNGISTSLPYDVQLAMLRTIPGLERAEMTRPGYAVEYDFVDPRELRPTLETRRVC 366 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARK----SNKLDCICFSRTDSYIGVMIDDLTS 417 GL+L GQINGT+GYEEAA QGL+AGIN+A K +D + R +Y GV++DDL + Sbjct: 367 GLYLGGQINGTSGYEEAAVQGLLAGINAALKLGFGPGDMDELVLRRDQAYAGVLVDDLIT 426 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL 477 KG EPYRMFTSRAEYR+ LR DNA RL PIG +LG I ++R +RF + + Sbjct: 427 KGTKEPYRMFTSRAEYRLILREDNAACRLMPIGRRLGLIDDQRWRRFEAFRADLAAHSER 486 Query: 478 LKSLVLTSKNLSSTSI----SFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-- 531 +++ L+ + + S + T E L P+ S Q++ + +A + + Sbjct: 487 MQATSLSPDAAVNARLEACGSSPLKNRRATLVELLRRPELSYQDVAQVA-EAGGLAPVPV 545 Query: 532 ---VIERLQIESSYAAYTGRQMIEAKEI-KFEEKRLIPKDFDYSSLPALSNELKEKLSIL 587 V ER++IE+ YA Y RQ+ EA + +FE RL P D DY + LS E EKLS Sbjct: 546 PERVAERIEIEAKYAGYLDRQVNEAARLARFEAVRL-PDDLDYGEIRGLSREAVEKLSAA 604 Query: 588 KPFNLLQASKIEGMTPAALNLLLIYI 613 +P ++ QA++I G+TPAA+++L+ ++ Sbjct: 605 RPRSVGQAARISGVTPAAVSILMTHL 630 >gi|325922968|ref|ZP_08184678.1| glucose-inhibited division protein A [Xanthomonas gardneri ATCC 19865] gi|325546549|gb|EGD17693.1| glucose-inhibited division protein A [Xanthomonas gardneri ATCC 19865] Length = 634 Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust. Identities = 287/622 (46%), Positives = 390/622 (62%), Gaps = 14/622 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAG EAA +A+ GA T L+TH T+G+MSCNPAIGG+GKGHLV+EIDAL Sbjct: 8 YDVIVIGGGHAGTEAALASARAGARTLLLTHNIETVGAMSCNPAIGGIGKGHLVKEIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M R AD AGIQ+R LN KGPAVR R QADR LYR A++ + +Q NL V Q V Sbjct: 68 GGAMARAADLAGIQWRTLNASKGPAVRATRCQADRTLYRNAIRCIVEAQPNLTVFQAAVD 127 Query: 126 GF-----NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 TE + + ++ Q VVLT GTFL G IH+G+ + AGRMGD P+ Sbjct: 128 DLLIHNGATEGDSVRGVITQTGLRFEAPAVVLTAGTFLAGKIHVGETQYAAGRMGDPPAT 187 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + F RLKTGTP R+DG+T+ + +Q D+ L SFM + + RQ+ Sbjct: 188 TLAARLRERPFAIDRLKTGTPPRIDGRTLDYSVMAEQPGDDPLPVMSFMGQRSDHPRQVS 247 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT T +TH II + S +YSG I+ GPRYCPSIEDK+VRF E+ HQIF+EPEG Sbjct: 248 CWITHTTEQTHDIIRSALHRSPLYSGQIEGIGPRYCPSIEDKVVRFAEKTSHQIFVEPEG 307 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L +YPNGIST+LP ++Q +R+I G + +I RPGYAIEYD+ +P+ L +LETK Sbjct: 308 LEVTEIYPNGISTSLPFDVQLALVRSIHGFAQAHITRPGYAIEYDFFDPRGLKASLETKA 367 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 + GLF AGQINGTTGYEEAAAQGL+AG+N+AR L R ++Y+GV++DDL + G Sbjct: 368 VGGLFFAGQINGTTGYEEAAAQGLLAGLNAARHVQALPAWSPRRDEAYLGVLVDDLITHG 427 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +G +G + + R RF+ + + L+ Sbjct: 428 TTEPYRMFTSRAEYRLQLREDNADARLTGVGRAMGLVDDARWARFSSKQEAVQRESARLQ 487 Query: 480 SLVLTSKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLF---SICPDARKFSSLVI 533 +L T N ++ + + + P+ + L ++ P + V Sbjct: 488 ALWATPGNALGREVAQTLGVAVSRETNVLDLIKRPELNYAALMRVPTLGPGVD--DTQVA 545 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I YA Y RQ + + E IP+ FDY+ + LS E+++KL ++P ++ Sbjct: 546 EQVEISVKYAGYLDRQRDDIARQQRHETTPIPEGFDYAGVRGLSIEVQQKLERVRPQSIG 605 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QA +I GMTPAA++LLL+++++ Sbjct: 606 QAQRIAGMTPAAISLLLVHLER 627 >gi|294010015|ref|YP_003543475.1| NAD/FAD-utilizing enzyme apparently involved in cell division [Sphingobium japonicum UT26S] gi|292673345|dbj|BAI94863.1| NAD/FAD-utilizing enzyme apparently involved in cell division [Sphingobium japonicum UT26S] Length = 616 Score = 546 bits (1408), Expect = e-153, Method: Compositional matrix adjust. Identities = 290/614 (47%), Positives = 401/614 (65%), Gaps = 1/614 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+GGGHAGCEAA AA+ GA+ L+T + +T+G+MSCNPAIGGLGKGHLVRE+DA Sbjct: 4 SYDVIVVGGGHAGCEAAGAAARKGAAVTLLTFERATVGAMSCNPAIGGLGKGHLVREVDA 63 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGL+ R ADAA I +R+LN KG AV+GPR QADR+ YR + R + +Q L++++GE Sbjct: 64 LDGLIARAADAAAIHYRMLNSSKGAAVQGPRVQADRKRYRAEIHRLLDAQSGLEIVEGEA 123 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 G + ++ + + D + +VVL TGTFL G + G+ + GR+ + + +L Sbjct: 124 VGLLLAEGAVAGLSLADGRRLHAPSVVLATGTFLGGKLFRGEETLTGGRISERAATALGV 183 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 D GRLKTGTP R+DG+TI W E Q +D S ++ Q+ C ITR Sbjct: 184 QLRALDLPMGRLKTGTPPRIDGRTIDWAALEAQPSDAEGWTMSALSPGRPLPQLSCAITR 243 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II E + S ++SG I+ GPRYCPSIEDK++RFG+R+GHQIFLEPEGL+ + Sbjct: 244 TNDRTHAIIREGLGRSPLFSGAIEGRGPRYCPSIEDKVIRFGDRDGHQIFLEPEGLDDHL 303 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LP ++Q +R++ GLEK +I PGYA+EYD+I+P+ L TLE + I GLF Sbjct: 304 VYPNGISTSLPADVQLAMVRSMAGLEKADIRVPGYAVEYDHIDPRALDATLEVQAIPGLF 363 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AGIN+A ++ + R SYIGVMIDDL +GV EPY Sbjct: 364 CAGQINGTTGYEEAAAQGLLAGINAAARARGEGPLILDRASSYIGVMIDDLVLQGVTEPY 423 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM T+RAEYR+ LR DNA RL IG + G +GE R +A+ E + L S + Sbjct: 424 RMLTARAEYRLRLRADNAGTRLAEIGFEHGVLGEERAAYYARRHDERAAVEEEL-SRTFS 482 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + ++ + +QDG R+ +E+ +P+ L + P + S + E L ++ YA Sbjct: 483 ATEMARSGAPVRQDGARRSLFEWARFPEVGRSLLCELAPTLSRISHDLREELLEDAHYAP 542 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ E E++ E+ +IP FD++++ LS E+ E+L++ +P L A +I G+TPA Sbjct: 543 YLERQEAEIAEMRRNERVVIPAGFDFAAIGGLSTEMVERLTLARPDTLAAAGRIRGITPA 602 Query: 605 ALNLLLIYIKKNTV 618 AL LL++I++ Sbjct: 603 ALAALLVHIRRRAA 616 >gi|269962683|ref|ZP_06177028.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269832606|gb|EEZ86720.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 631 Score = 546 bits (1408), Expect = e-153, Method: Compositional matrix adjust. Identities = 285/625 (45%), Positives = 391/625 (62%), Gaps = 13/625 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA +A+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHENFDVIVVGGGHAGTEAALASARTGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAEAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRNALENAPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V +++ + +V Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQSVDDLIVDQDRVVGVVTQMGLKFHAKAVVLTVGTFLGGKIHIGMESSSGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D +++ + E Q D FSFM + RQI Sbjct: 182 ALADRLRELPFRVDRLKTGTPPRIDARSVDFSVLEAQHGDNPTPVFSFMGKREHQPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CFITHTNEQTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTHELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 ISGLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 ISGLFFAGQINGTTGYEEAAAQGLMAGLNASLHSQGKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG I + R RF + I+ R LK Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLIDDVRWARFNEKIENMETERQRLK 481 Query: 480 SLVLTSKN--------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL 531 S + + L T ++ + G+ +SY + + F+ + ++ S Sbjct: 482 STWMNPNSAGIDELNKLLKTPMAREASGEDLLRRPEISYSQLTQLDAFAPALEDQQAS-- 539 Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 E+++I+ Y Y RQ E ++ E +P D DY + LSNE+ KL+ KP + Sbjct: 540 --EQVEIQVKYDGYIKRQQEEIEKSLRHEHTKLPADLDYKDVKGLSNEVVAKLTEAKPES 597 Query: 592 LLQASKIEGMTPAALNLLLIYIKKN 616 + AS+I G+TPAA+++LL+++KK+ Sbjct: 598 IGIASRISGITPAAISILLVHLKKH 622 >gi|313671978|ref|YP_004050089.1| glucose inhibited division protein a [Calditerrivibrio nitroreducens DSM 19672] gi|312938734|gb|ADR17926.1| glucose inhibited division protein A [Calditerrivibrio nitroreducens DSM 19672] Length = 621 Score = 546 bits (1408), Expect = e-153, Method: Compositional matrix adjust. Identities = 297/624 (47%), Positives = 384/624 (61%), Gaps = 29/624 (4%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAG EAA +A++GA T L+T TI MSCNPAIGGL KG LV++IDA Sbjct: 7 NYDVIVVGAGHAGIEAAFASARMGAKTLLLTIYIETIAQMSCNPAIGGLAKGCLVKDIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M + DA GIQFR+LN KKGPAVR R QAD++LYR M ++LS+ NLDV Q V Sbjct: 67 LGGEMAKCIDATGIQFRILNRKKGPAVRSSRAQADKKLYRQYMTNKLLSEPNLDVKQAVV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + + + + +C ++VLTTGTFL G+IHIG + PAGR + PS L Sbjct: 127 TDILVKDGAVIGVECDTGYIFKCRSLVLTTGTFLNGLIHIGDKRYPAGRANEFPSIHLAE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S + F+ RLKTGTPARL TI ++ E+Q D PFSF T+ IT Q+ C I Sbjct: 187 SLKRLGFEVQRLKTGTPARLHADTINFNLLEEQKGDNPPEPFSFETEAITLPQVSCFIAY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH+II +N+ S +YSG I+ GPRYCPSIEDK+ +F ++N HQIFLEPEGL+T Sbjct: 247 TNEHTHQIIRDNMHRSPLYSGVIQGIGPRYCPSIEDKVKKFPDKNRHQIFLEPEGLDTKE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y NG S++LP ++Q R++ GLEKV IRP YAIEYD++ P ELF TLETKKI GLF Sbjct: 307 IYANGFSSSLPIDVQIAMYRSLVGLEKVEFIRPAYAIEYDFVQPYELFHTLETKKIKGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQG++AGIN+ + + R +S+IGVMIDDL KGV EPY Sbjct: 367 FAGQINGTTGYEEAAAQGIIAGINAVLSIDNKQFV-LGRDESFIGVMIDDLVMKGVDEPY 425 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMF SR+EYR+ LR DNA+ RL G LG I R RF I E L L L Sbjct: 426 RMFHSRSEYRLLLREDNAEYRLLDKGYSLGIIPRSRYDRF---IHEKTLLEDCLGVL--- 479 Query: 485 SKNLSSTSISFKQDGKTRTAY--------------EFLSYPDFSIQNLFSICPDARKFSS 530 ++I + KT+ + + L P+ I +L P+ + Sbjct: 480 ------SNIKVPYNSKTKDKFATLGVNIEGSIPLIDLLKRPEVEISDLLEFFPN--NYPD 531 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 ++ + +I Y Y +Q EA ++ E IP + DYS + L E EKL+ P Sbjct: 532 RILNQAEISVKYEGYIKKQKEEAGRLQKIEGVKIPDNIDYSKIVGLRREYVEKLNKFNPK 591 Query: 591 NLLQASKIEGMTPAALNLLLIYIK 614 L QA +I+GMTPAA++L+ +YIK Sbjct: 592 TLGQALRIKGMTPAAVSLIHVYIK 615 >gi|320539761|ref|ZP_08039422.1| glucose-inhibited cell-division protein [Serratia symbiotica str. Tucson] gi|320030164|gb|EFW12182.1| glucose-inhibited cell-division protein [Serratia symbiotica str. Tucson] Length = 629 Score = 546 bits (1408), Expect = e-153, Method: Compositional matrix adjust. Identities = 289/616 (46%), Positives = 390/616 (63%), Gaps = 5/616 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA Sbjct: 6 QFDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLM D AGIQFR+LN KGPAVR R QADR LYR A++ + ++ NL + Q V Sbjct: 66 LGGLMATAIDHAGIQFRILNASKGPAVRATRAQADRVLYRQAIRTALENKPNLMIFQQPV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + V Q R VVLT GTFL G IHIG GR GD + SL Sbjct: 126 DDLIVENDHAVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLKNYRGGRAGDPTAISLSQ 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 + RLKTGTP R+D +TI + Q D + FSFM + + Q C IT Sbjct: 186 RLRELPLRVNRLKTGTPPRIDARTINFSVLMPQQGDTPVPVFSFMGNASQHPEQRTCYIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +YSG I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 246 HTNEKTHEVIRNNLDRSPMYSGIIEGIGPRYCPSIEDKVMRFADRNTHQIFLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q Q +R++ G++ I+RPGYAIEYD+ +P++L PTLE+K I GL Sbjct: 306 EIYPNGISTSLPFDVQMQIVRSMEGMQNARIVRPGYAIEYDFFDPRDLKPTLESKFIQGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+ R +N+ + R SY+GV++DDL++ G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGLNAGRYANQDEGWAPRRDQSYLGVLVDDLSTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT G LG + + R R+ + ++ R L+ + + Sbjct: 426 YRMFTSRAEYRLMLREDNADLRLTEKGRDLGLVDDVRWARYCEKLEHIEQERQRLRDIWM 485 Query: 484 --TSKNLSSTSISFKQD-GKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIE 539 ++N+ ++ K + E L P+ L S+ + + E+++I+ Sbjct: 486 HPHAENVEQVNLLLKTPLSREANGEELLRRPEMDYSLLTSVAAFSPALEDTQAAEQVEIQ 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ E ++ + E ++P D DY + LSNE+ KL+ KP ++ QAS+I Sbjct: 546 VKYQGYIARQQEEIEKQQRNENTVLPLDLDYCQVSGLSNEVIAKLNDHKPNSIGQASRIS 605 Query: 600 GMTPAALNLLLIYIKK 615 G+TPAA+++LLI++KK Sbjct: 606 GITPAAISILLIWLKK 621 >gi|172059160|ref|YP_001806812.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia ambifaria MC40-6] gi|205831492|sp|B1YQK2|MNMG_BURA4 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|171991677|gb|ACB62596.1| glucose inhibited division protein A [Burkholderia ambifaria MC40-6] Length = 656 Score = 546 bits (1408), Expect = e-153, Method: Compositional matrix adjust. Identities = 289/625 (46%), Positives = 389/625 (62%), Gaps = 15/625 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D +GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 67 GGAMAAATDESGIQFRILNSSKGPAVRATRAQADRILYKAAIRHRLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 127 DLMVEGDRVVGAVTQIGIRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQIECGIT 243 + GRLKTGTP R+DG++I + K ++Q D IP FSF+ + +Q+ C +T Sbjct: 187 LKELKLPQGRLKTGTPPRIDGRSIDFSKLDEQPGDLDPIPVFSFLGRAEQHPQQLPCWVT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPEGL T+ Sbjct: 247 HTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPEGLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP ++Q + + ++ GLE +I+RPGYAIEYDY +P+ L +LETK I+GL Sbjct: 307 EFYPNGISTSLPFDVQLELVHSMRGLENAHILRPGYAIEYDYFDPRALKASLETKAINGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+ R + D C R +Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGLNAGRYVQEKDAWCPRRDQAYLGVLVDDLVTRGVAEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F++ + LKS + Sbjct: 427 YRMFTSRAEYRLSLREDNADMRLTEIGRELGLVDDARWDAFSRKRDAVSRETERLKSTWV 486 Query: 484 TSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----CPDARKFSS------ 530 T K L +T++ K + E L P S + S+ C A + Sbjct: 487 TPKTLPPKEATALLGKAIDHEYSLAELLRRPGISYDGVCSLKGGECAPAEPLADDPVLLE 546 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 + E+++I Y Y RQ E + E +P DY + LS E+ +KL+ +P Sbjct: 547 QIKEQVEIGIKYQGYIERQASEIERNDANENTRLPDGIDYREVRGLSFEVSQKLNEFRPE 606 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 + QAS+I G+TPAA++LL++++K+ Sbjct: 607 TIGQASRISGVTPAAISLLMVHLKR 631 >gi|260774535|ref|ZP_05883448.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio metschnikovii CIP 69.14] gi|260610441|gb|EEX35647.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio metschnikovii CIP 69.14] Length = 631 Score = 546 bits (1408), Expect = e-153, Method: Compositional matrix adjust. Identities = 288/626 (46%), Positives = 393/626 (62%), Gaps = 15/626 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA AA+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHETFDVIVVGGGHAGTEAALAAARTGQRTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRHALENMPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q E++ + +V Q +VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQAADDLIVEQDHVRGVVTQMGLKFHAKSVVLTVGTFLGGKIHIGLENFSGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D +++ + + E Q D FSFM + + RQI Sbjct: 182 ALAHRLRELPFRVDRLKTGTPPRIDARSVDFSQLEAQHGDNPTPVFSFMGKREQHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CFITHTNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFSDKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTTELYPNGISTSLPFDVQVQIVRSMQGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I+GLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 INGLFFAGQINGTTGYEEAAAQGLMAGLNASLYSQDKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG + E+R RF + ++ R LK Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEKAYQLGLVCEQRWARFNQKVEHMQQERQRLK 481 Query: 480 SLVLTSKN--------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SS 530 + + L T IS + +G+ + L P+ + Q + SI + S Sbjct: 482 ETWINPTSTDAEALNALLKTPISREANGE-----DLLRRPEMTYQQVTSIATFSPAIEDS 536 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 E+++I+ Y Y RQ E ++ E +P D DY + LSNE+ KL+ KP Sbjct: 537 EAAEQVEIQVKYEGYIQRQRDEIEKSLRHEHTKLPADLDYQQVKGLSNEVVLKLNAAKPE 596 Query: 591 NLLQASKIEGMTPAALNLLLIYIKKN 616 L AS+I G+TPAA+++LL+++KK Sbjct: 597 TLGIASRISGITPAAISILLVHLKKQ 622 >gi|138897066|ref|YP_001127519.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Geobacillus thermodenitrificans NG80-2] gi|196249887|ref|ZP_03148583.1| glucose inhibited division protein A [Geobacillus sp. G11MC16] gi|166222936|sp|A4ITX0|MNMG_GEOTN RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|134268579|gb|ABO68774.1| Glucose inhibited division protein A [Geobacillus thermodenitrificans NG80-2] gi|196210763|gb|EDY05526.1| glucose inhibited division protein A [Geobacillus sp. G11MC16] Length = 629 Score = 546 bits (1408), Expect = e-153, Method: Compositional matrix adjust. Identities = 280/619 (45%), Positives = 393/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEAA +A++GA T +IT I M CNP+IGG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAALASARIGAKTLVITLNLDMIAFMPCNPSIGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ R+LN KGPAVR R QAD+ LY+ M++ + +Q+NL ++QG+V Sbjct: 67 LGGEMGKNIDKTYIQIRMLNTGKGPAVRALRAQADKVLYQREMKKTLENQKNLTLLQGKV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ Q + VV+TTGTFLRG I IG +K +G PS L Sbjct: 127 ERLIVEDGVCKGVITQTGAHYYAKAVVITTGTFLRGEIIIGDIKYSSGPNNQQPSIKLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F+ R KTGTP R++ +TI + KTE Q DE FS+ T K Q+ C +T Sbjct: 187 HLEELGFELVRFKTGTPPRVNSRTIDYSKTEIQPGDEEPRAFSYETTKYITDQLPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETHRII EN+ S +YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG T+ Sbjct: 247 TTEETHRIIDENLHLSPMYSGMIKGTGPRYCPSIEDKVVRFHDKPRHQIFLEPEGRETEE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE IQ + + TIPGLEK ++R GYAIEYD I P +L+PTLETK + L+ Sbjct: 307 VYVQGLSTSLPEHIQRKLLETIPGLEKAQLMRAGYAIEYDAIVPTQLWPTLETKLVKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QG++AGIN+A ++ + I SR+D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGIMAGINAAHRALGREEIILSRSDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G ++G I E R + F + + L+++++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTELGYRIGLISEERYQAFLAKKEAIEREKKRLQTVII- 485 Query: 485 SKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 K +Q G + A + L P+ + +++ + P + V E+++I+ Sbjct: 486 -KPTPEVQEVIRQAGGSELKDGIRAADLLRRPEMTYEHIQKLAPADEDIAPEVAEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + E + +K E + IP+D DY ++ L+ E ++KL ++P ++ QAS+I Sbjct: 545 IKYEGYIQKSLQEVERLKKMENKKIPEDIDYDAIQGLATEARQKLKQVRPLSIAQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+Y+++ + Sbjct: 605 GVNPADISILLVYLEQGRI 623 >gi|117918461|ref|YP_867653.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shewanella sp. ANA-3] gi|166200615|sp|A0KR28|MNMG_SHESA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|117610793|gb|ABK46247.1| glucose inhibited division protein A [Shewanella sp. ANA-3] Length = 629 Score = 546 bits (1407), Expect = e-153, Method: Compositional matrix adjust. Identities = 297/620 (47%), Positives = 388/620 (62%), Gaps = 15/620 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA++G+ T L+TH T+G MSCNPAIGG+GKGHLV+EIDAL Sbjct: 7 FDVIVVGGGHAGTEAALAAARMGSKTLLLTHNLDTLGQMSCNPAIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D AGIQFR LN KGPAVR R QADR LYR +Q + +Q NL + Q V Sbjct: 67 GGAMAIATDYAGIQFRTLNSSKGPAVRATRAQADRALYRQKIQNILQNQANLRIFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + + + +V Q VVLT GTFL G IHIG GR GD PS +L + Sbjct: 127 DLVVDNDRVVGVVTQMGLAFEAPAVVLTAGTFLSGKIHIGLENYSGGRAGDPPSIALAHR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D TI + + +Q D L SFM D + +QI C IT Sbjct: 187 LRELPIRVGRLKTGTPPRIDANTIDFTQMTEQKGDTPLPVMSFMGDVSHHPKQISCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH II + S +YSG I+ GPRYCPSIEDKI RF +++ HQIF+EPEGLNT+ Sbjct: 247 TNEKTHDIIRGGLDRSPMYSGVIEGIGPRYCPSIEDKIHRFSDKSSHQIFIEPEGLNTNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q +R+I G+E I+RPGYAIEYDY +P++L +LETK I+GLF Sbjct: 307 IYPNGISTSLPFDVQLNLVRSIQGMENAEIVRPGYAIEYDYFDPRDLKNSLETKTINGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG+N+A + + C R ++YIGV++DDL++ G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGMNAALQVQGKEAWCPRRDEAYIGVLVDDLSTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQ----EYNFLRSLL-- 478 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F++ ++ E LRS Sbjct: 427 RMFTSRAEYRLLLREDNADLRLTAKGRELGLVDDARWASFSEKMESIELELQRLRSQWIH 486 Query: 479 --KSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIER 535 LV +T IS + + E L P+ L I + L E+ Sbjct: 487 PNSPLVPVLNPHLNTPIS-----REASFEELLRRPEMDYSKLMQIEGFGPGLADPLAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 +QI+ Y+ Y RQ E + E +P + DY +P LSNE+ KL+ KP + QA Sbjct: 542 VQIQVKYSGYIQRQQEEINKAVRNENTGLPLNLDYKEVPGLSNEVIAKLNSHKPETIGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G+TPAA+++LL+++KK Sbjct: 602 SRISGITPAAISILLVHLKK 621 >gi|254995222|ref|ZP_05277412.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Anaplasma marginale str. Mississippi] Length = 631 Score = 546 bits (1407), Expect = e-153, Method: Compositional matrix adjust. Identities = 277/590 (46%), Positives = 373/590 (63%), Gaps = 6/590 (1%) Query: 31 TALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPA 90 T LITHK +IG MSCNPAIGG+ KG +VRE+DALDGLMG+ D A I +LN KGPA Sbjct: 32 TLLITHKIGSIGEMSCNPAIGGVAKGVVVREVDALDGLMGQAIDKASIHSTILNQSKGPA 91 Query: 91 VRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKN----IISSIVMQDNSMIR 146 V GPR QADR+ YR AMQ +L +NL+V++ V F+T+ ++S+ + ++ Sbjct: 92 VWGPRAQADRDAYRTAMQDIVLGYKNLEVLEASVIDFSTDNEAGSPCVASVTLSCGKVLH 151 Query: 147 CSTVVLTTGTFLRGVIHIGKLK-IPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLD 205 +VL TGTFL G+IH+G+ K IPAGRMGD PS L + F GRLKTGTP R+D Sbjct: 152 TRRLVLATGTFLGGMIHVGRDKGIPAGRMGDKPSTRLAKALCAHGFMLGRLKTGTPPRID 211 Query: 206 GKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSG 265 +I W T +Q D PFSF++D I Q+ C IT TN +TH I+ N+ +A + Sbjct: 212 RSSIDWSATAEQKGDLVPTPFSFLSDAIVLPQVSCYITHTNTKTHEIVRNNLHLAASCAS 271 Query: 266 DIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRT 325 + PRYCPSIE+K+ RF E HQ+FLEPEGL+++ VYPNG+ST+ P ++Q + +R+ Sbjct: 272 LVDVAAPRYCPSIEEKVRRFPEHKSHQVFLEPEGLDSNSVYPNGVSTSCPIDVQLEMLRS 331 Query: 326 IPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVA 385 I GLE V ++R GY +EY++++P+EL TLETKKI GL+ AGQINGTTGYEEAA QG+VA Sbjct: 332 IRGLENVRMLRHGYTVEYNFVDPRELHHTLETKKIKGLYFAGQINGTTGYEEAAGQGIVA 391 Query: 386 GINSARK-SNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADN 444 G N+A S R+++YIGVMIDDL + G EPYR+FTSRAEYR+ LR DNAD Sbjct: 392 GANAALSLSQNHAPFVLKRSEAYIGVMIDDLVTLGTSEPYRLFTSRAEYRLRLRSDNADM 451 Query: 445 RLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTA 504 RLT +G G + ERR QE + L L +T LS I Q+G+ +TA Sbjct: 452 RLTEMGYNAGLVSERRFGVLYNKKQEMDRLVEELHRTSITPHTLSKCGIFISQNGEKKTA 511 Query: 505 YEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLI 564 +E L +P ++ L + P FS + + IE YA Y RQ + + EE I Sbjct: 512 FELLGHPSITMDILIQLWPSLNSFSRAALAAVGIEGKYAPYLQRQAADIQSFLEEENASI 571 Query: 565 PKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIK 614 P D YS + LS E +EKL +PF++ A +I G+TPAA+ ++I+++ Sbjct: 572 PADIRYSEVHGLSKEAQEKLQRAQPFSIGAARRIPGITPAAIANIIIHLR 621 >gi|229026924|ref|ZP_04183247.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus AH1272] gi|228734382|gb|EEL85053.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus AH1272] Length = 629 Score = 546 bits (1407), Expect = e-153, Method: Compositional matrix adjust. Identities = 284/619 (45%), Positives = 392/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEDGVCKGVITQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVILGRADAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G ++G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEVGREIGLIKEDRYERFTNKKLQIEQEKERLGSIIIK 486 Query: 485 SKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + S S +DG A + L P+ + +++ + P S + E+++I+ Sbjct: 487 PRPEVQELIRSIGGSELKDGI--RASDLLRRPEVTYEHIHLLVPSEVALSDEITEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + Y Y + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS+I Sbjct: 545 TKYEGYIEKSLQQVDRMKKMENKKIPVDIDYDAISSLASEARQKLKDVRPLSMGQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 605 GVNPADVSILLVYIEQGKI 623 >gi|254250984|ref|ZP_04944302.1| Glucose-inhibited division protein A subfamily [Burkholderia dolosa AUO158] gi|124893593|gb|EAY67473.1| Glucose-inhibited division protein A subfamily [Burkholderia dolosa AUO158] Length = 656 Score = 546 bits (1407), Expect = e-153, Method: Compositional matrix adjust. Identities = 290/625 (46%), Positives = 389/625 (62%), Gaps = 15/625 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D +GIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q V Sbjct: 67 GGAMAAATDESGIQFRILNSSKGPAVRATRAQADRVLYKAAIRRRLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 127 DLMVEGDRVVGAVTQIGIRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTD-KITNRQIECGIT 243 + GRLKTGTP R+DG+TI + K ++Q D IP FSF+ + +Q+ C +T Sbjct: 187 LKELKLPQGRLKTGTPPRIDGRTIDFSKLDEQPGDLDPIPVFSFLGRVEQHPQQLPCWVT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPEGL T+ Sbjct: 247 HTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPEGLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP ++Q + + ++ GLE +I+RPGYAIEYDY +P+ L +LETK I+GL Sbjct: 307 EFYPNGISTSLPFDVQLELVHSMRGLENAHILRPGYAIEYDYFDPRALKASLETKAINGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+ R + D C R +Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGLNAGRYVQEKDAWCPRRDQAYLGVLVDDLVTRGVAEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F + + LKS + Sbjct: 427 YRMFTSRAEYRLSLREDNADMRLTEIGRELGLVDDVRWDAFCRKRDAVSRETERLKSTWV 486 Query: 484 TSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----CPDARKFS------S 530 T K L +T++ K + E L P S + + C A + + Sbjct: 487 TPKTLPAEEATALLGKAIDHEYSLAELLRRPGVSYDGVCGLKGGECGPAEPLADDPVLLA 546 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 + E+++I Y Y RQ E + E +P DY + LS E+ +KL+ +P Sbjct: 547 QIKEQVEIGIKYQGYIERQANEIERNDANENTRLPDGIDYRDVRGLSFEVSQKLNEFRPE 606 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 + QAS+I G+TPAA++LL++++K+ Sbjct: 607 TIGQASRISGVTPAAISLLMVHLKR 631 >gi|87122925|ref|ZP_01078790.1| glucose-inhibited division protein A [Marinomonas sp. MED121] gi|86161798|gb|EAQ63098.1| glucose-inhibited division protein A [Marinomonas sp. MED121] Length = 629 Score = 546 bits (1407), Expect = e-153, Method: Compositional matrix adjust. Identities = 290/619 (46%), Positives = 387/619 (62%), Gaps = 7/619 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA+ G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FDVIVVGGGHAGTEAALAAARTGVKTLLLTHNIETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR LN +KGPAVR R QADR LY+ A++ + +QENL + Q V Sbjct: 67 GGAMALATDKGGIQFRTLNSRKGPAVRATRAQADRILYKAAIRHTLENQENLWLFQQSVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E +V Q + TVVLT GTFL G+IH+G GR GD PS L Sbjct: 127 DLIVEDGCARGVVTQTGIRFQSKTVVLTAGTFLGGLIHVGLENHAGGRAGDPPSIGLAEK 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK-ITNRQIECGITR 244 F RLKTGTP R+D +++ + + Q D+ S+M + + QI C IT Sbjct: 187 LRALPFRVDRLKTGTPPRIDARSVDFSVMQAQPGDDITPVMSYMGSRDLHPAQINCFITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH II + S +Y+G I GPRYCPSIEDKIVRF ++N HQIF+EPEGL T Sbjct: 247 TNEKTHDIIRGGMDRSPMYTGVIDGIGPRYCPSIEDKIVRFADKNSHQIFVEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q + +R++ G E +I RPGYAIEYDY NP++L +LETK + GLF Sbjct: 307 LYPNGISTSLPFDVQIELVRSMKGFENAHITRPGYAIEYDYFNPQDLKYSLETKHMPGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG+N++ + + + C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGVNASLLAQEKEAWCPRRDEAYIGVLVDDLITMGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG I + R F + ++ LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLIDDERWAAFCAKKEAIETEQARLKSNWIV 486 Query: 485 SKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSI--CPDARKFSSLVIERLQIE 539 + +I+ K + Y + L P +++ ++ P+ S V E++QI Sbjct: 487 PNTDEAAAINPKLENPITHEYSLMDLLKRPGVEYKDVANLKNAPE-EPVSEQVAEQVQIA 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 YA Y RQ + + ++ +E +P D DYS++ LSNE+K+KL KP L AS+I+ Sbjct: 546 VKYAGYISRQAEDIERLRRQENTPLPVDMDYSNIEGLSNEVKQKLIEAKPATLAAASRIQ 605 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+TPAA++LLLI +KK + Sbjct: 606 GITPAAVSLLLISLKKRAI 624 >gi|225867464|ref|YP_002752842.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus 03BB102] gi|225788645|gb|ACO28862.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus 03BB102] Length = 629 Score = 546 bits (1407), Expect = e-153, Method: Compositional matrix adjust. Identities = 286/619 (46%), Positives = 393/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ Q + TVV+TTGTFLRG I +G+LK +G PS +L Sbjct: 127 ERLIVEDGECKGVITQAGAEYTAKTVVITTGTFLRGEIIMGELKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRSFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVILGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT IG ++G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEIGHEIGLIKEDRYERFTNKKLQIEQEKERLSSIIIK 486 Query: 485 SKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + S S +DG A + L P+ + +++ + P + S V E+++I+ Sbjct: 487 PRPEVQELIRSIGGSELKDGI--RASDLLRRPEMTYEHIHLLVPSEVELSDEVTEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS+I Sbjct: 545 IKYEGYIEKSLQQVERMKKMENKKIPVDIDYDAISSLASEARQKLKDVRPLSMGQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 605 GVNPADISILLVYIEQGKI 623 >gi|229014649|ref|ZP_04171763.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus mycoides DSM 2048] gi|228746660|gb|EEL96549.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus mycoides DSM 2048] Length = 629 Score = 546 bits (1407), Expect = e-153, Method: Compositional matrix adjust. Identities = 288/619 (46%), Positives = 394/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLFQGLV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIIEDGVCKGVITQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRAMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVILGRADAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFA----KYIQEYNFLRSL-LK 479 R+ TSRAEYR+ LR DNAD RLT +G ++G I E R +RF + QE L S+ +K Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEVGREIGLIKEDRYERFTNKKLQIEQEKERLESIFIK 486 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + S S +DG A + L P+ + +++ + P S + E+++I+ Sbjct: 487 PRPEVQELIRSIGGSELKDGI--RASDLLRRPEVTYEHIHLLVPSEVPLSDEITEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS+I Sbjct: 545 TKYEGYIEKSLQQVERMKKMENKKIPVDIDYDAISSLASEARQKLKDVRPLSMGQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LLIYI++ + Sbjct: 605 GVNPADVSILLIYIEQGKI 623 >gi|163943163|ref|YP_001648047.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus weihenstephanensis KBAB4] gi|229136308|ref|ZP_04265055.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus BDRD-ST196] gi|229170186|ref|ZP_04297872.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus AH621] gi|205831488|sp|A9VTL9|MNMG_BACWK RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|163865360|gb|ABY46419.1| glucose inhibited division protein A [Bacillus weihenstephanensis KBAB4] gi|228613287|gb|EEK70426.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus AH621] gi|228647180|gb|EEL03268.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus BDRD-ST196] Length = 629 Score = 546 bits (1407), Expect = e-153, Method: Compositional matrix adjust. Identities = 288/619 (46%), Positives = 394/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLFQGLV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIIEDGVCKGVITQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRAMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVILGRADAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFA----KYIQEYNFLRSL-LK 479 R+ TSRAEYR+ LR DNAD RLT +G ++G I E R +RF + QE L S+ +K Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEVGREIGLIKEDRYERFTNKKLQIEQEKERLESIFIK 486 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + S S +DG A + L P+ + +++ + P S + E+++I+ Sbjct: 487 PRPEVQELIRSIGGSELKDGI--RASDLLRRPEVTYEHIHLLVPSEVALSDEITEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS+I Sbjct: 545 TKYEGYIEKSLQQVERMKKMENKKIPVDIDYDAISSLASEARQKLKDVRPLSMGQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LLIYI++ + Sbjct: 605 GVNPADVSILLIYIEQGKI 623 >gi|71279490|ref|YP_271685.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Colwellia psychrerythraea 34H] gi|81170535|sp|Q47U38|MNMG_COLP3 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|71145230|gb|AAZ25703.1| glucose inhibited division protein A [Colwellia psychrerythraea 34H] Length = 629 Score = 546 bits (1407), Expect = e-153, Method: Compositional matrix adjust. Identities = 287/617 (46%), Positives = 383/617 (62%), Gaps = 5/617 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+GGGHAG EA+ AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA Sbjct: 6 SYDVIVVGGGHAGTEASLAAARMGCKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLM D + IQFR LN KGPAVR R QADR LYR ++ + +QENL + Q Sbjct: 66 LGGLMATAIDHSAIQFRTLNSSKGPAVRATRAQADRILYRNYVRNTLENQENLTIFQQPC 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + + Q + +VVLT GTFL G+IHIG GR GD S +L Sbjct: 126 DDLILENDRVVGVSTQMGLKFKGKSVVLTVGTFLSGLIHIGLNNYQGGRAGDPASVNLAA 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 F RLKTGTP RLD +++ + E+Q D FSFM + + QI C IT Sbjct: 186 KMRDMPFRMDRLKTGTPPRLDARSLDFSVMEEQAGDTPSPVFSFMGSQADHPEQISCFIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH+ I + + S +Y+G I+ GPRYCPSIEDKI RF +++ HQIF+EPEGL T Sbjct: 246 HTNEQTHQHIRDGLDRSPMYTGVIEGVGPRYCPSIEDKITRFADKSSHQIFVEPEGLTTH 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNGIST+LP ++Q +R+I G E I RPGYAIEYDY +P++L +LE+K + L Sbjct: 306 EVYPNGISTSLPFDVQMNLVRSIKGFENAFITRPGYAIEYDYFDPRDLKQSLESKFVQNL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGTTGYEEA AQGL+AG N+A + + D R +Y+GV+IDDL + G EP Sbjct: 366 YFAGQINGTTGYEEAGAQGLIAGANAANRVKERDEFTLGRDQAYMGVLIDDLATLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT G K+G +G+ R +RF + ++ R L+S + Sbjct: 426 YRMFTSRAEYRLLLREDNADIRLTEQGRKIGLVGDTRWQRFNEKMENVELERQRLRSTWV 485 Query: 484 TSKNLSSTSISF---KQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIE 539 + I+ K + + + P+ + +L I S E+++I+ Sbjct: 486 QKDHTKIDQINALLKTPMSKEASLEDLIRRPEVNYTDLMKIEGLGPAIEDSQASEQIEIQ 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + YA Y RQ+ E + K E IP+DFDY + LSNE+ KL P + +AS+I Sbjct: 546 TKYAGYIDRQLDEIAKKKRNEDTKIPRDFDYQQISGLSNEVVAKLKDACPETIGKASRIS 605 Query: 600 GMTPAALNLLLIYIKKN 616 G+TPAA++LLL+Y+KK+ Sbjct: 606 GITPAAISLLLVYLKKH 622 >gi|24376230|ref|NP_720274.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shewanella oneidensis MR-1] gi|81170576|sp|Q8E8A9|MNMG_SHEON RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|24351293|gb|AAN57717.1|AE015908_2 glucose-inhibited division protein A [Shewanella oneidensis MR-1] Length = 629 Score = 546 bits (1407), Expect = e-153, Method: Compositional matrix adjust. Identities = 297/620 (47%), Positives = 388/620 (62%), Gaps = 15/620 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA++G+ T L+TH T+G MSCNPAIGG+GKGHLV+EIDAL Sbjct: 7 FDVIVVGGGHAGTEAALAAARMGSKTLLLTHNLDTLGQMSCNPAIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D AGIQFR LN KGPAVR R QADR LYR +Q + +Q NL + Q V Sbjct: 67 GGAMAIATDYAGIQFRTLNSSKGPAVRATRAQADRALYRQKIQNILQNQANLRIFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + +V Q S VVLT GTFL G IHIG GR GD PS +L + Sbjct: 127 DIVVENDHVVGVVTQMGLAFEASAVVLTAGTFLSGKIHIGLENYSGGRAGDPPSIALAHR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D TI + + +Q D L SFM D + +QI C IT Sbjct: 187 LRELPIRVGRLKTGTPPRIDANTIDFSQMTEQKGDTPLPVMSFMGDVSHHPKQISCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH II + S +YSG I+ GPRYCPSIEDKI RF +++ HQIF+EPEGL T+ Sbjct: 247 TNEKTHDIIRGGLDRSPMYSGVIEGIGPRYCPSIEDKIHRFSDKSSHQIFIEPEGLTTNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q +R+I G+E I+RPGYAIEYDY +P++L +LETK I+GLF Sbjct: 307 IYPNGISTSLPFDVQLNLVRSIKGMENAEIVRPGYAIEYDYFDPRDLKNSLETKTINGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG+N++ + + C R ++YIGV++DDL++ G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGMNASLQVQGKEAWCPRRDEAYIGVLVDDLSTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQ----EYNFLRSLL-- 478 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F++ ++ E LRS Sbjct: 427 RMFTSRAEYRLLLREDNADLRLTAKGRELGLVDDARWAAFSEKMESIELELQRLRSQWIH 486 Query: 479 --KSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIER 535 LV +T IS + + E L P+ L I + L E+ Sbjct: 487 PNSPLVPVLNPHLNTPIS-----REASFEELLRRPEMDYNKLMQIEGFGPGLADPLAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 +QI+ Y+ Y RQ E + E +P + DY +P LSNE+ KL+ KP + QA Sbjct: 542 VQIQVKYSGYIQRQQEEINKAVRNENTGLPLNLDYKEVPGLSNEVIAKLNSHKPETIGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G+TPAA+++LL+++KK Sbjct: 602 SRISGITPAAISILLVHLKK 621 >gi|329732221|gb|EGG68571.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus 21193] Length = 625 Score = 546 bits (1406), Expect = e-153, Method: Compositional matrix adjust. Identities = 285/621 (45%), Positives = 396/621 (63%), Gaps = 7/621 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VREID Sbjct: 3 QEYDVIVIGAGHAGVEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVREID 62 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R I +ENL ++QG Sbjct: 63 ALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEENLHIMQGM 122 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + + + + V++TTGTFLRG I +G +K +G PS +L Sbjct: 123 VDELIIENDEVKGVRTNIGTEYHSKAVIITTGTFLRGEIILGNMKYSSGPNHQLPSITLS 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 ++ + FD R KTGTP R++ KTI + KTE Q D+ FSF T + Q+ C +T Sbjct: 183 DNLRELGFDIVRFKTGTPPRVNSKTIDYSKTEIQPGDDVGRAFSFETTEYILDQLPCWLT 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN ETH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG NT+ Sbjct: 243 YTNAETHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRNTN 302 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETK I L Sbjct: 303 EVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKMIKNL 362 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGT+GYEEAA QGL+AGIN+A K SR+D+YIGV+IDDL +KG EP Sbjct: 363 YTAGQINGTSGYEEAAGQGLMAGINAAGKVLNTGEKILSRSDAYIGVLIDDLVTKGTNEP 422 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G +LG I E R RF + Q+ + L + + Sbjct: 423 YRLLTSRAEYRLLLRHDNADLRLTDMGYELGMISEERYARFNEKRQQIDAEIKRLSDIRI 482 Query: 484 TSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 K T +Q G +R A + L P+ + + I + + ++ V E+++I Sbjct: 483 --KPNEHTQAIIEQHGGSRLKDGILAIDLLRRPEMTYDIILEILEEEHQLNADVEEQVEI 540 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 ++ Y Y + + + +++K E++ IP+D DYS + +L+ E +EKLS +KP N+ QAS+I Sbjct: 541 QTKYEGYINKSLQQVEKVKRMEEKKIPEDLDYSKIDSLATEAREKLSEVKPLNIAQASRI 600 Query: 599 EGMTPAALNLLLIYIKKNTVK 619 G+ PA +++LLIY+++ ++ Sbjct: 601 SGVNPADISILLIYLEQGKLQ 621 >gi|189190196|ref|XP_001931437.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187973043|gb|EDU40542.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 657 Score = 546 bits (1406), Expect = e-153, Method: Compositional matrix adjust. Identities = 288/626 (46%), Positives = 400/626 (63%), Gaps = 15/626 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M + YDVIVIGGGHAGCEA+A AA+ GA TALIT +G SCNP+ GG+GKG ++R Sbjct: 1 MRHAPYDVIVIGGGHAGCEASAAAARSGARTALITPSVHNLGVCSCNPSFGGIGKGTMIR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EID+LDG++GR+ D AG+QFRVLN KKGPAV GPR Q DR LY+ M+ EIL + L V+ Sbjct: 61 EIDSLDGVVGRIVDKAGVQFRVLNRKKGPAVWGPRAQIDRALYKEYMKNEILGYKGLSVV 120 Query: 121 QGEVA----------GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIP 170 +G VA G + I+ + ++ +I+ VV+TTGTFL G IHIG P Sbjct: 121 EGSVADIIVDRSQEEGSKGQYGRITGVRLESGEIIQTENVVITTGTFLGGEIHIGLEAYP 180 Query: 171 AGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT 230 +GRMG++ + L S F GRLKTGTP RLD TI + E Q D +PFS++ Sbjct: 181 SGRMGEAATFGLSKSLKDAGFTLGRLKTGTPPRLDANTIDYKVLEAQEGDYPPMPFSYLN 240 Query: 231 DKI-TNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERN 289 +++ +Q+ TRTN TH II +N+ S +K GPRYCPS+E K++RF ++ Sbjct: 241 ERVQVEKQLLNHETRTNEATHDIIRQNLDKSIHIRETVK--GPRYCPSLESKVIRFADKT 298 Query: 290 GHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPK 349 H I+LEPEG N +VVYPNGIS +P ++Q+ ++TI GLE V++++PGY +EYDY++P+ Sbjct: 299 SHIIWLEPEGFNNNVVYPNGISCTVPADVQNTMLKTIKGLENVSMLQPGYGVEYDYVDPR 358 Query: 350 ELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIG 409 L TLETK ISGLFLAGQINGTTGYEEAA QG++AGIN+ +S + + +R D YIG Sbjct: 359 HLRSTLETKNISGLFLAGQINGTTGYEEAAGQGIIAGINAGLRSLGKEPMTLTRADGYIG 418 Query: 410 VMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQ 469 +MIDDL +KGV EPYRMFTSR+EYR+S R DNAD RLT +G G I + R K F++ + Sbjct: 419 IMIDDLITKGVSEPYRMFTSRSEYRMSARADNADVRLTALGRAAGVISDARWKAFSEEAE 478 Query: 470 EYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFS 529 + L L+ + + + + D R+AY+ L P+ + Q+L + + F Sbjct: 479 QMAALTKALQDKKMGWTDWNKHGFKVRNDSTKRSAYDLLRLPNTTPQSLLPLIAEISSFP 538 Query: 530 SLVIERLQIESSYAAYTGRQMI-EAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 + +R+ I ++YA Y Q + +A+ +K E +L P D DY S+ LS E K L + + Sbjct: 539 QHIQDRVHINATYAPYVEYQAVSQARWLKDENLKL-PDDLDYESIFGLSFEEKRALEVAR 597 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIK 614 P ++ A ++EG+TP LL Y++ Sbjct: 598 PESVGMARRVEGVTPTGALRLLQYVR 623 >gi|315659999|ref|ZP_07912857.1| glucose inhibited division protein A [Staphylococcus lugdunensis M23590] gi|315494900|gb|EFU83237.1| glucose inhibited division protein A [Staphylococcus lugdunensis M23590] Length = 626 Score = 546 bits (1406), Expect = e-153, Method: Compositional matrix adjust. Identities = 285/623 (45%), Positives = 400/623 (64%), Gaps = 7/623 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + ++YDVIVIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VRE Sbjct: 1 MTQNYDVIVIGAGHAGIEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R I + +LD++Q Sbjct: 61 IDALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEAHLDIMQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G V E N++ + + VV+TTGTFLRG I +G +K +G PS + Sbjct: 121 GMVDDLIIEDNVVKGVRTNIGTEYHAKAVVITTGTFLRGEIILGNMKYSSGPNHQLPSIT 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L ++ + F+ R KTGTP R++ KTI + KTE Q D+ FSF T + Q+ C Sbjct: 181 LADNLRELGFEVVRFKTGTPPRVNAKTIDYSKTEIQPGDDVGRAFSFETTEYILDQLPCW 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN ETH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG N Sbjct: 241 LTYTNGETHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRN 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETKKI Sbjct: 301 TNEVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKKIK 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 L+ AGQINGT+GYEEAA QG++AGIN+A K SR+D+YIGV+IDDL +KG Sbjct: 361 NLYTAGQINGTSGYEEAAGQGIMAGINAAGKVLGTGEKILSRSDAYIGVLIDDLVTKGTN 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQ----EYNFLRSL 477 EPYR+ TSRAEYR+ LR DNAD RLT IG +LG I E R RF + Q E + L + Sbjct: 421 EPYRLLTSRAEYRLLLRHDNADLRLTDIGYELGMISEARYARFNEKRQQIQDEIDRLTHI 480 Query: 478 -LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 +K T + + S +DG A + L P+ + + I +A + V E++ Sbjct: 481 RIKPNAHTQSVIEAHGGSQLKDGI--LAIDLLRRPEMTYDTILEILGEAHQLPEAVAEQV 538 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I++ Y Y + + + +++K E++ IP++ DYS + +L+ E +EKL+ +KP N+ QAS Sbjct: 539 EIQTKYEGYINKSLQQVEKVKRMEQKKIPEELDYSKVDSLATEAREKLAKVKPLNIAQAS 598 Query: 597 KIEGMTPAALNLLLIYIKKNTVK 619 +I G+ PA +++LL+Y+++ ++ Sbjct: 599 RISGVNPADISILLVYLEQGKLQ 621 >gi|223043387|ref|ZP_03613433.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus capitis SK14] gi|222443176|gb|EEE49275.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus capitis SK14] Length = 625 Score = 546 bits (1406), Expect = e-153, Method: Compositional matrix adjust. Identities = 280/619 (45%), Positives = 395/619 (63%), Gaps = 3/619 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VREID Sbjct: 3 QEYDVIVIGAGHAGIEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVREID 62 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R I ++NLD++QG Sbjct: 63 ALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEDNLDIMQGM 122 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E N + + + VV+TTGTFLRG I +G +K +G PS +L Sbjct: 123 VDELIIEDNEVKGVRTNIGTEYLSKAVVVTTGTFLRGEIILGNMKYSSGPNHQLPSITLA 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 ++ + FD R KTGTP R++ KTI + KTE Q D+ FS+ T + Q+ C +T Sbjct: 183 DNLRQLGFDVVRFKTGTPPRVNAKTIDYSKTEIQPGDDVGRAFSYETTEYILDQLPCWLT 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN ETH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG NT+ Sbjct: 243 YTNGETHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRNTN 302 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETK I L Sbjct: 303 EVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKSIKNL 362 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGT+GYEEAA QG++AGIN+A K SR+D+YIGV+IDDL +KG EP Sbjct: 363 YTAGQINGTSGYEEAAGQGIMAGINAAGKVLGTGEKILSRSDAYIGVLIDDLVTKGTNEP 422 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G +LG I E R RF + Q+ L + + Sbjct: 423 YRLLTSRAEYRLLLRHDNADLRLTDVGYELGMISEERYARFNEKRQQIQNEIQRLTDIRI 482 Query: 484 TSKNLSSTSISFKQDGKTRT---AYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + + + I K + + A + L P+ + + I + + V E+++I++ Sbjct: 483 KPNDHTQSVIESKGGSRLKDGILAIDLLRRPEMTYDTILEILEEDHQLPDAVEEQVEIQT 542 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y + + + +++K E++ IP+D DYS + +L++E +EKL+ +KP N+ QAS+I G Sbjct: 543 KYEGYINKSLQQVEKVKRMEEKKIPEDLDYSKVDSLASEAREKLAEVKPLNIAQASRISG 602 Query: 601 MTPAALNLLLIYIKKNTVK 619 + PA +++LL+Y+++ ++ Sbjct: 603 VNPADISILLVYLEQGKLQ 621 >gi|222475410|ref|YP_002563827.1| glucose inhibited division protein A (gidA) [Anaplasma marginale str. Florida] gi|254811505|sp|B9KGL7|MNMG_ANAMF RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|222419548|gb|ACM49571.1| glucose inhibited division protein A (gidA) [Anaplasma marginale str. Florida] Length = 637 Score = 546 bits (1406), Expect = e-153, Method: Compositional matrix adjust. Identities = 277/590 (46%), Positives = 373/590 (63%), Gaps = 6/590 (1%) Query: 31 TALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPA 90 T LITHK +IG MSCNPAIGG+ KG +VRE+DALDGLMG+ D A I +LN KGPA Sbjct: 38 TLLITHKIGSIGEMSCNPAIGGVAKGVVVREVDALDGLMGQAIDKASIHSTILNQSKGPA 97 Query: 91 VRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKN----IISSIVMQDNSMIR 146 V GPR QADR+ YR AMQ +L +NL+V++ V F+T+ ++S+ + ++ Sbjct: 98 VWGPRAQADRDAYRTAMQDIVLGYKNLEVLEASVIDFSTDNEAGSPCVASVTLSCGKVLH 157 Query: 147 CSTVVLTTGTFLRGVIHIGKLK-IPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLD 205 +VL TGTFL G+IH+G+ K IPAGRMGD PS L + F GRLKTGTP R+D Sbjct: 158 TRRLVLATGTFLGGMIHVGRDKGIPAGRMGDKPSTRLAKALCAHGFMLGRLKTGTPPRID 217 Query: 206 GKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSG 265 +I W T +Q D PFSF++D I Q+ C IT TN +TH I+ N+ +A + Sbjct: 218 RSSIDWSATAEQKGDLVPTPFSFLSDAIVLPQVSCYITHTNTKTHEIVRNNLHLAASCAS 277 Query: 266 DIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRT 325 + PRYCPSIE+K+ RF E HQ+FLEPEGL+++ VYPNG+ST+ P ++Q + +R+ Sbjct: 278 LVDVAAPRYCPSIEEKVRRFPEHKSHQVFLEPEGLDSNSVYPNGVSTSCPIDVQLEMLRS 337 Query: 326 IPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVA 385 I GLE V ++R GY +EY++++P+EL TLETKKI GL+ AGQINGTTGYEEAA QG+VA Sbjct: 338 IRGLENVRMLRHGYTVEYNFVDPRELHHTLETKKIKGLYFAGQINGTTGYEEAAGQGIVA 397 Query: 386 GINSARK-SNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADN 444 G N+A S R+++YIGVMIDDL + G EPYR+FTSRAEYR+ LR DNAD Sbjct: 398 GANAALSLSQNHAPFVLKRSEAYIGVMIDDLVTLGTSEPYRLFTSRAEYRLRLRSDNADM 457 Query: 445 RLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTA 504 RLT +G G + ERR QE + L L +T LS I Q+G+ +TA Sbjct: 458 RLTEMGYNAGLVSERRFGVLYNKKQEMDRLVEELHRTSITPHTLSKCGIFISQNGEKKTA 517 Query: 505 YEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLI 564 +E L +P ++ L + P FS + + IE YA Y RQ + + EE I Sbjct: 518 FELLGHPSITMDILIQLWPSLNSFSRAALAAVGIEGKYAPYLQRQAADIQSFLEEENASI 577 Query: 565 PKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIK 614 P D YS + LS E +EKL +PF++ A +I G+TPAA+ ++I+++ Sbjct: 578 PADIRYSEVHGLSKEAQEKLQRAQPFSIGAARRIPGITPAAIANIIIHLR 627 >gi|237749326|ref|ZP_04579806.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Oxalobacter formigenes OXCC13] gi|229380688|gb|EEO30779.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Oxalobacter formigenes OXCC13] Length = 639 Score = 546 bits (1406), Expect = e-153, Method: Compositional matrix adjust. Identities = 288/630 (45%), Positives = 401/630 (63%), Gaps = 26/630 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA V+A++G T L+TH T+G +SCNP+IGG+GK HLV+E+DA+ Sbjct: 7 FDVIVVGGGHAGTEAALVSARMGMKTLLVTHNFETLGQLSCNPSIGGIGKSHLVKEVDAM 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+M D AGIQFR+LN KGPAVR R Q DR +YR ++ ++ +Q+NL + Q +V Sbjct: 67 GGVMALATDKAGIQFRILNSSKGPAVRATRAQIDRVIYRQIIRYQLENQKNLLLFQQQVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + Q R ++VVLT GTF+ G I +G P GR GD P+ +L +S Sbjct: 127 DLILEGEKVVGVKTQGGVEFRGTSVVLTAGTFIDGKIFVGLNSYPGGRAGDVPALALSHS 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTD-KITNRQIECGIT 243 + + GRLKTGTP R+DG TI + +KQ D +P FS + + Q+ C IT Sbjct: 187 LKELNLPQGRLKTGTPPRIDGNTIDFSVMKKQLGDLDPVPVFSLRGNASMHPEQLPCWIT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH II + S +++G I+ GPRYCPSIEDKI RF ++N HQIFLEPEG+ T+ Sbjct: 247 HTNTKTHDIIRAGLDKSPLFTGVIEGVGPRYCPSIEDKIHRFSDKNSHQIFLEPEGVKTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+L E Q +RTIPGLE +I+RPGYAIEYD+ +P+ L +LET++I GL Sbjct: 307 EYYPNGISTSLSFETQIDLVRTIPGLENAHILRPGYAIEYDFYDPRCLKSSLETRQIKGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN++ + + R+++Y+GVM+DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGINASLYVQEKEPWVPKRSEAYMGVMVDDLITQGVQEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIG-------ERRQKRFAKYIQEYNFLRS 476 YRMFTSRAEYR+SLR DNAD RLT G KLGC+ E+++++ A+ I+ Sbjct: 427 YRMFTSRAEYRLSLREDNADIRLTEAGYKLGCVPLEQWIDFEQKREKIAREIER------ 480 Query: 477 LLKSLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI-------CPDAR 526 +KS + L+S + K+ + + + + PD L S+ Sbjct: 481 -MKSTWVHPSMLNSEEAERVIGKEIEREYSLADLMKRPDVDYDKLASLTSIEGKNWAAEE 539 Query: 527 KFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSI 586 + V E+++I+ YA Y RQ E + ++ E +P+ Y+ + ALS E+++KL Sbjct: 540 ELDEKVKEQVEIQIKYAGYIERQTREVRRQQYYENLRLPQSMSYAEVSALSIEVRQKLDK 599 Query: 587 LKPFNLLQASKIEGMTPAALNLLLIYIKKN 616 KP L QAS+I G+TPAA++LLLIY+KK Sbjct: 600 QKPETLGQASRISGVTPAAISLLLIYLKKQ 629 >gi|294143117|ref|YP_003559095.1| glucose-inhibited division protein A [Shewanella violacea DSS12] gi|293329586|dbj|BAJ04317.1| glucose-inhibited division protein A [Shewanella violacea DSS12] Length = 630 Score = 546 bits (1406), Expect = e-153, Method: Compositional matrix adjust. Identities = 301/620 (48%), Positives = 390/620 (62%), Gaps = 15/620 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA++G+ T L+TH T+G MSCNPAIGG+GKGHLV+EIDAL Sbjct: 7 FDVIVVGGGHAGTEAALAAARMGSKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D AGIQFR LN KGPAVR R QADR LYR +Q+ + +Q NL + Q V Sbjct: 67 GGAMAIATDFAGIQFRTLNSSKGPAVRATRAQADRALYRAKIQQILQNQPNLKLFQQGVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + ++ +V Q +TVVLT GTFL G IHIG GR GD PS +L + Sbjct: 127 DLIVKNGRVTGVVTQMGLAFEAATVVLTAGTFLSGKIHIGLQNYSGGRAGDPPSIALADR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGITR 244 + GRLKTGTP RLD TI +D +Q D L SF+ D K RQI C +T Sbjct: 187 LRELPIRIGRLKTGTPPRLDANTINFDLMAEQKGDTPLPVMSFVGDVKDHPRQISCYVTH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II E + S +YSG I+ GPRYCPSIEDKI RF ++ HQIF+EPEGLNT+ Sbjct: 247 TNERTHDIIREGLDRSPLYSGVIEGIGPRYCPSIEDKINRFADKTSHQIFVEPEGLNTNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q +RTI G+E IIRPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 IYPNGISTSLPFDVQINLVRTIKGMENAEIIRPGYAIEYDYFDPRDLKNSLETKSIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N++ + + R +Y+GV++DDL++ G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGMNASLQVQGKESWSPRRDQAYLGVLVDDLSTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQ----EYNFLRSLL-- 478 RMFTSRAEYR+ LR DNAD RLT G +LG + + R +F++ + E LR L Sbjct: 427 RMFTSRAEYRLLLREDNADLRLTEKGRELGLVDDNRWIQFSEKRESIELELQRLRGLWVH 486 Query: 479 -KSLVLTSKNLS-STSISFKQDGKTRTAYEFLSYPDF-SIQNLFSICPDARKFSSLVIER 535 S +L N +T IS + + + YP S++ D R E+ Sbjct: 487 PNSPLLGVLNPELNTPISREASFEDLLRRPEMDYPKLMSLEGFGPGLEDKR-----AAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 +QI+ Y+ Y RQ E + E +P D DY +P LSNE+ K++ KP + QA Sbjct: 542 VQIQVKYSGYIQRQQDEIDKALKHETTGLPLDLDYQEVPGLSNEVIAKMNEHKPETIGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I GMTPAA+++LL+++K+ Sbjct: 602 SRISGMTPAAISILLVHLKR 621 >gi|229176159|ref|ZP_04303651.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus MM3] gi|228607318|gb|EEK64648.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus MM3] Length = 629 Score = 546 bits (1406), Expect = e-153, Method: Compositional matrix adjust. Identities = 290/619 (46%), Positives = 393/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTYIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E +V Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEDGECKGVVTQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVILGRADAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFA----KYIQEYNFLRS-LLK 479 R+ TSRAEYR+ LR DNAD RLT IG ++G I E R +RF K QE L S ++K Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEIGREIGLIKEERYERFTNKKLKIEQEKERLSSIIIK 486 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + S S +DG A + L P+ + +++ + P + S + E+++I+ Sbjct: 487 PRPEVQELIRSIGGSELKDGI--RASDLLRRPEMTYEHIHLLVPSEVELSDEITEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS+I Sbjct: 545 IKYEGYIEKSLQQVERMKKMENKKIPVDIDYDAISSLASEARQKLKDVRPLSMGQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 605 GVNPADVSILLVYIEQGKI 623 >gi|283471925|emb|CAQ51136.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus ST398] Length = 625 Score = 545 bits (1405), Expect = e-153, Method: Compositional matrix adjust. Identities = 285/621 (45%), Positives = 396/621 (63%), Gaps = 7/621 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VREID Sbjct: 3 QEYDVIVIGAGHAGVEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVREID 62 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R I +ENL ++QG Sbjct: 63 ALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEENLHIMQGM 122 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E N + + + V++TTGTFLRG I +G +K +G PS +L Sbjct: 123 VDELIIEDNEVKGVRTNIGTEYLSKAVIITTGTFLRGEIILGNMKYSSGPNHQLPSITLS 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 ++ + F+ R KTGTP R++ KTI + KTE Q D+ FSF T + Q+ C +T Sbjct: 183 DNLRELGFEIVRFKTGTPPRVNSKTIDYSKTEIQPGDDVGRAFSFETTEYILDQLPCWLT 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN ETH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG NT+ Sbjct: 243 YTNAETHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRNTN 302 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETK I L Sbjct: 303 EVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKMIKNL 362 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGT+GYEEAA QGL+AGIN+A K SR+D+YIGV+IDDL +KG EP Sbjct: 363 YTAGQINGTSGYEEAAGQGLMAGINAAGKVLNTGEKILSRSDAYIGVLIDDLVTKGTNEP 422 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G +LG I E R RF + Q+ + L + + Sbjct: 423 YRLLTSRAEYRLLLRHDNADLRLTDMGYELGMISEERYARFNEKRQQIDAEIKRLSDIRI 482 Query: 484 TSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 K T +Q G +R A + L P+ + + I + + ++ V E+++I Sbjct: 483 --KPNEHTQAIIEQHGGSRLKDGILAIDLLRRPEMTYDIILEILEEEHQLNADVEEQVEI 540 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 ++ Y Y + + + +++K E++ IP+D DYS + +L+ E +EKLS +KP N+ QAS+I Sbjct: 541 QTKYEGYINKSLQQVEKVKRMEEKKIPEDLDYSKIDSLATEAREKLSEVKPLNIAQASRI 600 Query: 599 EGMTPAALNLLLIYIKKNTVK 619 G+ PA +++LLIY+++ ++ Sbjct: 601 SGVNPADISILLIYLEQGKLQ 621 >gi|229035141|ref|ZP_04189087.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus AH1271] gi|228728207|gb|EEL79237.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus AH1271] Length = 629 Score = 545 bits (1405), Expect = e-153, Method: Compositional matrix adjust. Identities = 284/619 (45%), Positives = 393/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G++T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSNTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEDGECKGVITQSGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVILGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G ++G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEVGREIGLIKEERYERFTNKKLQIEQEKERLSSIIIK 486 Query: 485 SKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + S S +DG A + L P+ + +++ + P + S V E+++I+ Sbjct: 487 PRPEVQELIRSIGGSELKDGI--RASDLLRRPEMTYEHIHLLVPSEVELSDEVTEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + + +K E + IP D DY ++ ++++E ++KL ++P ++ QAS+I Sbjct: 545 IKYEGYIEKSLQQVERMKKMENKKIPVDIDYDAISSIASEARQKLKDVRPLSMGQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 605 GVNPADVSILLVYIEQGKI 623 >gi|56417042|ref|YP_154116.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Anaplasma marginale str. St. Maries] gi|81170513|sp|Q5PA19|MNMG_ANAMM RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|56388274|gb|AAV86861.1| glucose inhibited division protein A [Anaplasma marginale str. St. Maries] Length = 637 Score = 545 bits (1405), Expect = e-153, Method: Compositional matrix adjust. Identities = 277/590 (46%), Positives = 373/590 (63%), Gaps = 6/590 (1%) Query: 31 TALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPA 90 T LITHK +IG MSCNPAIGG+ KG +VRE+DALDGLMG+ D A I +LN KGPA Sbjct: 38 TLLITHKIGSIGEMSCNPAIGGVAKGVVVREVDALDGLMGQAIDKASIHSTILNQSKGPA 97 Query: 91 VRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKN----IISSIVMQDNSMIR 146 V GPR QADR+ YR AMQ +L +NL+V++ V F+T+ ++S+ + ++ Sbjct: 98 VWGPRAQADRDAYRTAMQDIVLGYKNLEVLEASVIDFSTDNEAGSPCVASVTLSCGKVLH 157 Query: 147 CSTVVLTTGTFLRGVIHIGKLK-IPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLD 205 +VL TGTFL G+IH+G+ K IPAGRMGD PS L + F GRLKTGTP R+D Sbjct: 158 TRRLVLATGTFLGGMIHVGRDKGIPAGRMGDKPSTRLAKALCAHGFMLGRLKTGTPPRID 217 Query: 206 GKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSG 265 +I W T +Q D PFSF++D I Q+ C IT TN +TH I+ N+ +A + Sbjct: 218 RSSIDWSATAEQKGDLVPTPFSFLSDAIVLPQVSCYITHTNTKTHEIVRNNLHLAASCAS 277 Query: 266 DIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRT 325 + PRYCPSIE+K+ RF E HQ+FLEPEGL+++ VYPNG+ST+ P ++Q + +R+ Sbjct: 278 LVDVAAPRYCPSIEEKVRRFPEHKSHQVFLEPEGLDSNSVYPNGVSTSCPIDVQLEMLRS 337 Query: 326 IPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVA 385 I GLE V ++R GY +EY++++P+EL TLETKKI GL+ AGQINGTTGYEEAA QG+VA Sbjct: 338 IRGLENVRMLRHGYTVEYNFVDPRELHHTLETKKIKGLYFAGQINGTTGYEEAAGQGIVA 397 Query: 386 GINSARK-SNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADN 444 G N+A S R+++YIGVMIDDL + G EPYR+FTSRAEYR+ LR DNAD Sbjct: 398 GANAALSLSQNHAPFVLKRSEAYIGVMIDDLVTLGTSEPYRLFTSRAEYRLRLRSDNADM 457 Query: 445 RLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTA 504 RLT +G G + ERR QE + L L +T LS I Q+G+ +TA Sbjct: 458 RLTEMGYNAGLVSERRFGVLYNKKQEMDRLVDELHRTSITPHTLSKCGIFISQNGEKKTA 517 Query: 505 YEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLI 564 +E L +P ++ L + P FS + + IE YA Y RQ + + EE I Sbjct: 518 FELLGHPSITMDILIQLWPSLNSFSRAALAAVGIEGKYAPYLQRQAADIQSFLEEENASI 577 Query: 565 PKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIK 614 P D YS + LS E +EKL +PF++ A +I G+TPAA+ ++I+++ Sbjct: 578 PADIRYSEVHGLSKEAQEKLQRAQPFSIGAARRIPGITPAAIANIIIHLR 627 >gi|242372606|ref|ZP_04818180.1| glucose inhibited division protein A [Staphylococcus epidermidis M23864:W1] gi|242349661|gb|EES41262.1| glucose inhibited division protein A [Staphylococcus epidermidis M23864:W1] Length = 626 Score = 545 bits (1405), Expect = e-153, Method: Compositional matrix adjust. Identities = 279/619 (45%), Positives = 395/619 (63%), Gaps = 3/619 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VREID Sbjct: 3 QEYDVIVIGAGHAGIEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVREID 62 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R I ++NLD++QG Sbjct: 63 ALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEDNLDIMQGM 122 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E N + + + R VV+TTGTFLRG I +G +K +G PS +L Sbjct: 123 VDELIIEDNEVKGVRTNIGTEYRAKAVVITTGTFLRGEIILGNMKYSSGPNHQLPSITLA 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 ++ + FD R KTGTP R++ KTI + KTE Q D+ FS+ T + Q+ C +T Sbjct: 183 DNLRELGFDVVRFKTGTPPRVNAKTIDYSKTEIQPGDDVGRAFSYETTEYILDQLPCWLT 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN ETH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG NT+ Sbjct: 243 YTNGETHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRNTN 302 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETK I L Sbjct: 303 EVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKAIKNL 362 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGT+GYEEAA QG++AGIN+A SR+D+YIGV+IDDL +KG EP Sbjct: 363 YTAGQINGTSGYEEAAGQGIMAGINAAGNVLGTGEKILSRSDAYIGVLIDDLVTKGTNEP 422 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G +LG I E R RF + ++ L + + Sbjct: 423 YRLLTSRAEYRLLLRHDNADLRLTDVGYELGMISEERYARFNEKRKQIQDEIQRLTDIRI 482 Query: 484 TSKNLSSTSISFKQDGKTRT---AYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + + + I K + + A + L P+ + + I + + V E+++I++ Sbjct: 483 KPNDHTQSVIESKGGSRLKDGILAIDLLRRPEMTYDTILEILEEEHRLPEAVEEQVEIQT 542 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y + + + +++K E++ IP+D DYS + +L++E +EKL+ +KP N+ QAS+I G Sbjct: 543 KYEGYINKSLQQVEKVKRMEEKKIPEDLDYSKVDSLASEAREKLAEVKPLNIAQASRISG 602 Query: 601 MTPAALNLLLIYIKKNTVK 619 + PA +++LL+Y+++ ++ Sbjct: 603 VNPADISILLVYLEQGKLQ 621 >gi|152991329|ref|YP_001357051.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Nitratiruptor sp. SB155-2] gi|205375702|sp|A6Q5D5|MNMG_NITSB RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|151423190|dbj|BAF70694.1| glucose inhibited division protein A [Nitratiruptor sp. SB155-2] Length = 625 Score = 545 bits (1405), Expect = e-153, Method: Compositional matrix adjust. Identities = 288/614 (46%), Positives = 391/614 (63%), Gaps = 5/614 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA +A++G T +IT IG+ SCNPAIGGL KGHLV+EIDAL Sbjct: 3 FDVIVIGGGHAGIEAALASARMGMKTLMITILAEQIGAASCNPAIGGLAKGHLVKEIDAL 62 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG D GIQFR+LN KGPAVRG R Q D + YR+ M+ +L+ NL+V Q V Sbjct: 63 GGQMGLTTDKTGIQFRILNASKGPAVRGSRAQIDMDRYRIMMRTIVLNTPNLEVRQEMVD 122 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + + + + ++ V++TTGTFLRG+IHIG++K AGR G+ SN+L +S Sbjct: 123 RLLIKGDAVVGVETNLKNVYHAKKVIVTTGTFLRGLIHIGEIKQEAGRAGEFASNALSDS 182 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK--ITNRQIECGIT 243 GRLKTGT AR+D KTI + + E Q DE IPFSF TD+ Q+ C IT Sbjct: 183 LKSLGLRLGRLKTGTCARIDAKTIDFSRMEVQPGDENPIPFSFRTDRKRFNPTQLPCYIT 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II N + +++G I+ GPRYCPSIEDKI RF ++ H IF+EP+ L Sbjct: 243 YTNERTHEIIESNFHRAPLFTGQIEGVGPRYCPSIEDKIYRFRDKERHHIFVEPQTLEAT 302 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 Y NG+ST+LP ++Q + IR++ GLE ++R GYAIEYD+++P +L TLETK I L Sbjct: 303 EYYINGMSTSLPPDVQLEMIRSVKGLEHAEVVRYGYAIEYDFVDPTQLKHTLETKSIKNL 362 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGTTGYEEAAAQGL+AGIN+A + + + R ++YIGV+IDDL +KG EP Sbjct: 363 YCAGQINGTTGYEEAAAQGLMAGINAALAIKEQEPLILGRDEAYIGVLIDDLVTKGTKEP 422 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R+ LR DNAD RL P G KLG + E + + ++ LLK+ + Sbjct: 423 YRMFTSRAEFRLLLREDNADLRLMPYGHKLGLVDEETYMKMIRKKEQIEKGLDLLKNSFI 482 Query: 484 TSKNLSSTSISFKQDGKT--RTAY-EFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 T + +S ++GK +TA ++ P F+++ L + P+ ++FS E++ IE+ Sbjct: 483 TPNKETLELLSSLEEGKITDKTALVNVVARPTFTMEKLEVLVPEIQEFSEEAKEQILIEA 542 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y Q + +++ IP+D D ++ LSNE+KEKL KP L AS+I G Sbjct: 543 KYHQYIQMQKEQIEKMHELMNVKIPEDLDIDAISGLSNEVKEKLKAHKPPTLFAASQISG 602 Query: 601 MTPAALNLLLIYIK 614 +TPAA+ +L IYIK Sbjct: 603 ITPAAIEILHIYIK 616 >gi|167629164|ref|YP_001679663.1| glucose-inhibited division protein a [Heliobacterium modesticaldum Ice1] gi|205831517|sp|B0TAB5|MNMG_HELMI RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|167591904|gb|ABZ83652.1| glucose-inhibited division protein a [Heliobacterium modesticaldum Ice1] Length = 637 Score = 545 bits (1405), Expect = e-153, Method: Compositional matrix adjust. Identities = 288/621 (46%), Positives = 392/621 (63%), Gaps = 13/621 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAGCEAA +A+LGA T ++T + M CNPAIGG KGHLVREIDAL Sbjct: 9 YDVIVIGAGHAGCEAALASARLGAKTLILTISWDNVALMPCNPAIGGPAKGHLVREIDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG D IQ R+LN KGPAV R QAD++ Y+ M R + QENLDV Q V Sbjct: 69 GGQMGLTIDKTCIQIRLLNTGKGPAVHALRAQADKKRYQREMIRVLEHQENLDVRQAMVE 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E+ + I + +V+TTGT+LRG I IG L P G G PS +L S Sbjct: 129 SVVVEQGRVRGIRTNTGAFFAAPALVITTGTYLRGRIIIGDLHYPGGPNGYFPSVALAAS 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 GR KTGTPAR+DG+T+ + + +Q D + FSF++ +I +QI C +T T Sbjct: 189 LRDIGVRLGRFKTGTPARVDGRTVDFSQMVEQPGDREPLNFSFLSPRIERKQISCWLTYT 248 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 ETH+II +N+ S +Y+G I+ GPRYCPSIEDK+VRF ++ HQ+F+EPEG T + Sbjct: 249 TEETHQIIRDNLHRSPLYAGVIEGTGPRYCPSIEDKVVRFADKKSHQVFIEPEGEGTHEM 308 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+ST+LPE++Q +R+I G++ V IIRPGYAIEYDY++P +L +LE ++I GLF Sbjct: 309 YVQGMSTSLPEDVQVTMLRSIIGMKDVKIIRPGYAIEYDYVDPTQLRLSLEHQEIGGLFT 368 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGT+GYEEAAAQGL+AGIN+AR + + R+D+YIGV+IDDL +KG EPYR Sbjct: 369 AGQINGTSGYEEAAAQGLMAGINAARFVKGEEPLVLKRSDAYIGVLIDDLVTKGTNEPYR 428 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQ--EYNFLRSLLKSLVL 483 M TSRAEYR+ LR DNAD RLT IG +G + +RR +RF + +Q E +R KS + Sbjct: 429 MLTSRAEYRLLLRQDNADQRLTEIGRSIGLVDDRRYRRFREKMQLLEQEVVR--WKSSFV 486 Query: 484 TSKNLSSTSISFKQDG----KTRTAYEFLSYPDFSIQNLFSICPDARK---FSSLVIERL 536 T N +I ++ K + Y+ L P+ + +L +C D K V E++ Sbjct: 487 TPGNKKIQAILDEKKSAPLTKGVSLYDLLRRPELTYDDLIPLCNDGEKDLPIDPEVAEQV 546 Query: 537 QIESSYAAYTGRQMIEAKEI-KFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 +I + + Y +Q + K E KRL P D DY + LSNE ++KL KP ++ QA Sbjct: 547 EISAKFEGYLVKQQAQVDRFNKLENKRL-PADLDYKRVHGLSNEGRQKLIARKPVSIGQA 605 Query: 596 SKIEGMTPAALNLLLIYIKKN 616 S+I G++PA +++LL+Y+++ Sbjct: 606 SRISGVSPADISILLVYLEQQ 626 >gi|302334325|gb|ADL24518.1| glucose inhibited division protein A [Staphylococcus aureus subsp. aureus JKD6159] Length = 625 Score = 545 bits (1405), Expect = e-153, Method: Compositional matrix adjust. Identities = 285/621 (45%), Positives = 396/621 (63%), Gaps = 7/621 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VREID Sbjct: 3 QEYDVIVIGAGHAGVEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVREID 62 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R I +ENL ++QG Sbjct: 63 ALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEENLHIMQGM 122 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E N + + + V++TTGTFLRG I +G +K +G PS +L Sbjct: 123 VDELIIEDNEVKGVRTNIGTEYLSKAVIITTGTFLRGEIILGNMKYSSGPNHQLPSITLS 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 ++ + FD R KTGTP R++ KTI + KTE Q D+ FSF T + Q+ C +T Sbjct: 183 DNLRELGFDIVRFKTGTPPRVNSKTIDYSKTEIQPGDDVGRAFSFETTEYILDQLPCWLT 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN ETH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG NT+ Sbjct: 243 YTNAETHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRNTN 302 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETK I L Sbjct: 303 EVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKMIKNL 362 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGT+GYEEAA QGL+AGIN+A K SR+D+YIGV+IDDL +KG EP Sbjct: 363 YTAGQINGTSGYEEAAGQGLMAGINAAGKVLNTGEKILSRSDAYIGVLIDDLVTKGTNEP 422 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G +LG I E R RF + ++ + L + + Sbjct: 423 YRLLTSRAEYRLLLRHDNADLRLTDMGYELGMISEERYARFNEKRKQIDAEIKRLSDIRI 482 Query: 484 TSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 K T +Q G +R A + L P+ + + I + + ++ V E+++I Sbjct: 483 --KPNEHTQAIIEQHGGSRLKDGILAIDLLRRPEMTYDIILEILEEEHQLNADVEEQVEI 540 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 ++ Y Y + + + +++K E++ IP+D DYS + +L+ E +EKLS +KP N+ QAS+I Sbjct: 541 QTKYEGYINKSLQQVEKVKRMEEKKIPEDLDYSKIDSLATEAREKLSEVKPLNIAQASRI 600 Query: 599 EGMTPAALNLLLIYIKKNTVK 619 G+ PA +++LLIY+++ ++ Sbjct: 601 SGVNPADISILLIYLEQGKLQ 621 >gi|88608296|ref|YP_506583.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neorickettsia sennetsu str. Miyayama] gi|123491615|sp|Q2GD63|MNMG_NEOSM RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|88600465|gb|ABD45933.1| glucose inhibited division protein A [Neorickettsia sennetsu str. Miyayama] Length = 627 Score = 545 bits (1405), Expect = e-153, Method: Compositional matrix adjust. Identities = 285/610 (46%), Positives = 397/610 (65%), Gaps = 9/610 (1%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDG 67 V+VIGGGHAG EAAA +A+LG T L+T+ IG MSCNPAIGG+GKG++V+E+DA+ G Sbjct: 4 VVVIGGGHAGVEAAAASARLGVETLLVTNNVMNIGEMSCNPAIGGIGKGNVVKEVDAMGG 63 Query: 68 LMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGF 127 +M D A I R+LN KG AV GPR QADR+LY+ A+ + E L +++ + Sbjct: 64 VMALAIDRASIHSRMLNRSKGAAVWGPRAQADRKLYKCAVLELLTKYEKLSILEDHITDL 123 Query: 128 NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFM 187 E + + +V + I+CS VLTTGTFL G+I G ++ GR G+ S L N+ Sbjct: 124 IIENDRLMGVVGEKTGTIKCSAAVLTTGTFLNGIIQTGSERVEGGRFGEKASQCLGNTLR 183 Query: 188 KFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTNL 247 + F RL+TGTPARL +I + +Q D IPFS+M +IT Q+ C IT TN Sbjct: 184 RH-FKISRLRTGTPARLYKDSINYSALVEQPGDSPPIPFSYMNTEITVPQVSCYITHTNG 242 Query: 248 ETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYP 307 +TH II ++K SAI +G + + GPRYCPSIEDK+VRF E++ HQIFLEPEGL++++VYP Sbjct: 243 KTHEIIRNSLKFSAIRNG-VSARGPRYCPSIEDKVVRFAEKDSHQIFLEPEGLDSELVYP 301 Query: 308 NGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAG 367 NGIS +LP+EIQ +FIR+I GLEK ++ R Y IEYDYI+P+EL TLE+K++ L+ AG Sbjct: 302 NGISNSLPKEIQEEFIRSIAGLEKASVARYAYTIEYDYIDPRELRSTLESKRVKNLYFAG 361 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL-EPYRM 426 QINGTTGYEEAA QG+VAG N+A + SR++ YIGVMIDDL + G EPYR+ Sbjct: 362 QINGTTGYEEAAGQGIVAGSNAAGAG-----LIISRSEGYIGVMIDDLITLGTNGEPYRL 416 Query: 427 FTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSK 486 FTSRAEYR++LR DNAD RLT ++G + E R + K ++ +S L L T Sbjct: 417 FTSRAEYRLNLRSDNADFRLTEKAYRVGLVDEERYAAYKKKYDTFHNYKSKLNELSTTPY 476 Query: 487 NLSSTS-ISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAY 545 L+ IS QDG ++A+ ++ P F ++L I P+ + E L I + Y Y Sbjct: 477 ELAKIEGISIAQDGVRKSAWNLITQPLFVFEDLLRIWPELSEVPEKYREMLTINARYEPY 536 Query: 546 TGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAA 605 RQ + K ++ EK +IP +FD+ ++ +LS+E+ EKL ++P L QA +I G+TPAA Sbjct: 537 LLRQEQDVKLLRNNEKVVIPSNFDFGAIKSLSSEVIEKLEAVRPETLAQAKRISGVTPAA 596 Query: 606 LNLLLIYIKK 615 + +LI++++ Sbjct: 597 IVSILIHLRR 606 >gi|269958543|ref|YP_003328330.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Anaplasma centrale str. Israel] gi|269848372|gb|ACZ49016.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Anaplasma centrale str. Israel] Length = 637 Score = 545 bits (1405), Expect = e-153, Method: Compositional matrix adjust. Identities = 277/590 (46%), Positives = 373/590 (63%), Gaps = 6/590 (1%) Query: 31 TALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPA 90 T LITHK +IG MSCNPAIGG+ KG +VRE+DALDGLMG+ D A I +LN KGPA Sbjct: 38 TLLITHKIGSIGEMSCNPAIGGVAKGVVVREVDALDGLMGQAIDKASIHSTILNQSKGPA 97 Query: 91 VRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKN----IISSIVMQDNSMIR 146 V GPR QADR+ YR AMQ +L +NL+V++ V F+T+ ++S+ + ++ Sbjct: 98 VWGPRAQADRDAYRTAMQDIVLGYKNLEVLEASVIDFSTDNEAGSPCVASVTLSCGKVLH 157 Query: 147 CSTVVLTTGTFLRGVIHIGKLK-IPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLD 205 +VL TGTFL G+IH+G+ K IPAGRMGD PS L + F GRLKTGTP R+D Sbjct: 158 TRRLVLATGTFLGGMIHVGRDKGIPAGRMGDKPSTRLAKALCAHGFMLGRLKTGTPPRID 217 Query: 206 GKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSG 265 +I W T +Q D PFSF++D I Q+ C IT TN +TH I+ N+ +A + Sbjct: 218 RSSIDWSATAEQKGDLVPTPFSFLSDAIVLPQVSCYITHTNTKTHEIVRNNLHLAASCAS 277 Query: 266 DIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRT 325 + PRYCPSIE+K+ RF E HQ+FLEPEGL+++ VYPNG+ST+ P ++Q + +R+ Sbjct: 278 LVDVAAPRYCPSIEEKVRRFPEHKSHQVFLEPEGLDSNSVYPNGVSTSCPIDVQLEMLRS 337 Query: 326 IPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVA 385 I GLE V ++R GY +EY++++P+EL TLETKKI GL+ AGQINGTTGYEEAA QG+VA Sbjct: 338 IRGLENVRMLRHGYTVEYNFVDPRELHHTLETKKIKGLYFAGQINGTTGYEEAAGQGIVA 397 Query: 386 GINSARK-SNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADN 444 G N+A S R+++YIGVMIDDL + G EPYR+FTSRAEYR+ LR DNAD Sbjct: 398 GANAALSLSQSHAPFVLKRSEAYIGVMIDDLVTLGTSEPYRLFTSRAEYRLLLRSDNADM 457 Query: 445 RLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTA 504 RLT +G G + ERR QE + L L +T LS I Q+G+ +TA Sbjct: 458 RLTEMGYNAGLVSERRFGVLYNKKQEVDRLVEELHRTSITPHTLSKCGIFISQNGEKKTA 517 Query: 505 YEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLI 564 +E L +P ++ L + P FS + + IE YA Y RQ + + EE I Sbjct: 518 FELLGHPSITMDILMQLWPSLNSFSRAALAAVGIEGKYAPYLQRQAADIQSFLEEENASI 577 Query: 565 PKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIK 614 P D YS + LS E +EKL +PF++ A +I G+TPAA+ ++I+++ Sbjct: 578 PADIRYSEVHGLSKEAQEKLQRAQPFSIGAARRIPGITPAAIANIIIHLR 627 >gi|107024504|ref|YP_622831.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia cenocepacia AU 1054] gi|116688117|ref|YP_833740.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia cenocepacia HI2424] gi|123371037|sp|Q1BR97|MNMG_BURCA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|166222913|sp|A0K2X0|MNMG_BURCH RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|105894693|gb|ABF77858.1| glucose inhibited division protein A [Burkholderia cenocepacia AU 1054] gi|116646206|gb|ABK06847.1| glucose inhibited division protein A [Burkholderia cenocepacia HI2424] Length = 656 Score = 545 bits (1405), Expect = e-153, Method: Compositional matrix adjust. Identities = 289/625 (46%), Positives = 388/625 (62%), Gaps = 15/625 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D +GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 67 GGAMAAATDESGIQFRILNSSKGPAVRATRAQADRILYKAAIRHRLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IH+G GR GD + SL + Sbjct: 127 DLMVEGDRVVGAVTQIGIRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSSR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQIECGIT 243 + GRLKTGTP R+DG+TI + K ++Q D IP FSF+ + +Q+ C +T Sbjct: 187 LKELKLPQGRLKTGTPPRIDGRTIDFSKLDEQPGDLDPIPVFSFLGRADQHPQQLPCWVT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPEGL T Sbjct: 247 HTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPEGLTTH 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP ++Q + + ++ GLE +I+RPGYAIEYDY +P+ L +LETK I+GL Sbjct: 307 EFYPNGISTSLPFDVQLELVHSMRGLENAHILRPGYAIEYDYFDPRALKASLETKAINGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+ R + D C R +Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGLNAGRYVQEKDAWCPRRDQAYLGVLVDDLVTRGVAEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F++ + LKS + Sbjct: 427 YRMFTSRAEYRLSLREDNADMRLTEIGRELGLVDDARWDAFSRKRDAVSRETERLKSTWV 486 Query: 484 TSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----CPDARKFSS------ 530 T K L +T++ K + E L P S + + C A + Sbjct: 487 TPKTLPVEEATALLGKAIDHEYSLAELLRRPGVSYDGVCGLKGGECGPAEPLADDPVLLE 546 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 + E+++I Y Y RQ E + E +P DY + LS E+ +KL+ +P Sbjct: 547 QIKEQVEIGIKYQGYIERQASEIERNDANENTRLPDGIDYREVRGLSFEVSQKLNEFRPE 606 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 + QAS+I G+TPAA++LL++++K+ Sbjct: 607 TIGQASRISGVTPAAISLLMVHLKR 631 >gi|254246686|ref|ZP_04940007.1| Glucose-inhibited division protein [Burkholderia cenocepacia PC184] gi|124871462|gb|EAY63178.1| Glucose-inhibited division protein [Burkholderia cenocepacia PC184] Length = 656 Score = 545 bits (1404), Expect = e-153, Method: Compositional matrix adjust. Identities = 289/625 (46%), Positives = 388/625 (62%), Gaps = 15/625 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D +GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 67 GGAMAAATDESGIQFRILNSSKGPAVRATRAQADRILYKAAIRHRLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IH+G GR GD + SL + Sbjct: 127 DLMVEGDRVVGAVTQIGIRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSSR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQIECGIT 243 + GRLKTGTP R+DG+TI + K ++Q D IP FSF+ + +Q+ C +T Sbjct: 187 LKELKLPQGRLKTGTPPRIDGRTIDFSKLDEQPGDLDPIPVFSFLGRADQHPQQLPCWVT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPEGL T Sbjct: 247 HTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPEGLTTH 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP ++Q + + ++ GLE +I+RPGYAIEYDY +P+ L +LETK I+GL Sbjct: 307 EFYPNGISTSLPFDVQLELVHSMRGLENAHILRPGYAIEYDYFDPRALKASLETKAINGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+ R + D C R +Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGLNAGRYVQEKDAWCPRRDQAYLGVLVDDLVTRGVAEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F++ + LKS + Sbjct: 427 YRMFTSRAEYRLSLREDNADMRLTEIGRELGLVDDARWDAFSRKRDAVSRETERLKSTWV 486 Query: 484 TSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----CPDARKFSS------ 530 T K L +T++ K + E L P S + + C A + Sbjct: 487 TPKTLPAEEATALLGKAIDHEYSLAELLRRPGVSYDGVCGLKGGECGPAEPLADDPVLLE 546 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 + E+++I Y Y RQ E + E +P DY + LS E+ +KL+ +P Sbjct: 547 QIKEQVEIGIKYQGYIERQASEIERNDANENTRLPDGIDYREVRGLSFEVSQKLNEFRPE 606 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 + QAS+I G+TPAA++LL++++K+ Sbjct: 607 TIGQASRISGVTPAAISLLMVHLKR 631 >gi|186477785|ref|YP_001859255.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia phymatum STM815] gi|238691317|sp|B2JJL1|MNMG_BURP8 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|184194244|gb|ACC72209.1| glucose inhibited division protein A [Burkholderia phymatum STM815] Length = 652 Score = 545 bits (1404), Expect = e-153, Method: Compositional matrix adjust. Identities = 291/625 (46%), Positives = 390/625 (62%), Gaps = 15/625 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++G T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALASARMGNKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 67 GGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRILYKAAIRHRLENQPNLWLFQQSVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 127 DLMVEGDRVVGAVTQVGVRFRSRAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTD-KITNRQIECGIT 243 + GRLKTGTP R+DG+TI + K E+Q D IP FSF+ + RQ+ C +T Sbjct: 187 LKELKLPQGRLKTGTPPRIDGRTIDFSKLEEQPGDLDPIPVFSFLGRVEQHPRQVPCWVT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPEGL T+ Sbjct: 247 HTNAQTHDIIRSGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPEGLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP ++Q + +R++ GLE +I+RPGYAIEYDY +P+ L +LETK ISGL Sbjct: 307 EFYPNGISTSLPFDVQLELVRSMVGLEHAHILRPGYAIEYDYFDPRGLKASLETKAISGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ C R +Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGINAGLYVQSKGPWCPRRDQAYLGVLVDDLVTRGVSEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F++ + L++ + Sbjct: 427 YRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDDVRWDAFSRKRDAVSRETERLRTTWV 486 Query: 484 TSKNLSS---TSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----C-PDARKFSSLVI-- 533 K LSS T++ K + + L P S + + C PD V+ Sbjct: 487 NPKTLSSEEATALLGKPIDHEYSLADLLRRPGVSYDGICGLREGTCGPDEALAHDDVLLA 546 Query: 534 ---ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 E+++I Y Y RQ E + + E +P++ DY+ + LS E ++KL+ +P Sbjct: 547 QIKEQIEIGVKYQGYIERQAGEIERNEAHENTRLPENLDYTEVRGLSFEARQKLTQFRPE 606 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 + QAS+I G+TPAA++LL++++K+ Sbjct: 607 TIGQASRISGITPAAISLLMVHLKR 631 >gi|110807565|ref|YP_691085.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella flexneri 5 str. 8401] gi|110617113|gb|ABF05780.1| glucose-inhibited division [Shigella flexneri 5 str. 8401] Length = 602 Score = 545 bits (1404), Expect = e-153, Method: Compositional matrix adjust. Identities = 277/595 (46%), Positives = 379/595 (63%), Gaps = 5/595 (0%) Query: 27 LGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVK 86 +G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL GLM + D AGIQFR+LN Sbjct: 1 MGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRILNAS 60 Query: 87 KGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIR 146 KGPAVR R QADR YR A++ + +Q NL + Q V E + + V Q R Sbjct: 61 KGPAVRATRAQADRVRYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGLKFR 120 Query: 147 CSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDG 206 VVLT GTFL G IHIG GR GD PS L + GRLKTGTP R+D Sbjct: 121 AKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRRLRELPLRVGRLKTGTPPRIDA 180 Query: 207 KTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGITRTNLETHRIIMENIKHSAIYSG 265 +TI + +Q D + FSFM + + +Q+ C IT TN +TH +I N+ S +Y+G Sbjct: 181 RTIDFSVLAQQHGDNPMPVFSFMGNASLHPQQVPCYITHTNEKTHDVIRSNLDRSPMYAG 240 Query: 266 DIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRT 325 I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ +YPNGIST+LP ++Q Q +R+ Sbjct: 241 VIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNEIYPNGISTSLPFDVQMQIVRS 300 Query: 326 IPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVA 385 + G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF AGQINGTTGYEEAAAQGL+A Sbjct: 301 MQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLFFAGQINGTTGYEEAAAQGLLA 360 Query: 386 GINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNR 445 G+N+AR S + +R+ +Y+GV++DDL + G EPYRMFTSRAEYR+ LR DNAD R Sbjct: 361 GLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPYRMFTSRAEYRLMLREDNADLR 420 Query: 446 LTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDG---KTR 502 LT IG +LG + + R RF + ++ R LKS +T ++ ++ + Sbjct: 421 LTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVTPSAEAAAEVNAHLTAPLSREA 480 Query: 503 TAYEFLSYPDFSIQNLFSICPDARKFS-SLVIERLQIESSYAAYTGRQMIEAKEIKFEEK 561 + + L P+ + + L ++ P A + E+++I+ Y Y RQ E ++ E Sbjct: 481 SGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQVKYEGYIARQQDEIEKQLRNEN 540 Query: 562 RLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKN 616 L+P DY + LSNE+ KL+ KP ++ QAS+I G+TPAA+++LL+++KK Sbjct: 541 TLLPATLDYRQISGLSNEVIAKLNDHKPASIGQASRISGVTPAAISILLVWLKKQ 595 >gi|170731465|ref|YP_001763412.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia cenocepacia MC0-3] gi|205831493|sp|B1K1K2|MNMG_BURCC RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|169814707|gb|ACA89290.1| glucose inhibited division protein A [Burkholderia cenocepacia MC0-3] Length = 656 Score = 545 bits (1404), Expect = e-153, Method: Compositional matrix adjust. Identities = 289/625 (46%), Positives = 388/625 (62%), Gaps = 15/625 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D +GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 67 GGAMAAATDESGIQFRILNSSKGPAVRATRAQADRILYKAAIRHRLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IH+G GR GD + SL + Sbjct: 127 DLMVEGDRVVGAVTQIGIRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSSR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQIECGIT 243 + GRLKTGTP R+DG+TI + K ++Q D IP FSF+ + +Q+ C +T Sbjct: 187 LKELKLPQGRLKTGTPPRIDGRTIDFSKLDEQPGDLDPIPVFSFLGRAEQHPQQLPCWVT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPEGL T Sbjct: 247 HTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPEGLTTH 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP ++Q + + ++ GLE +I+RPGYAIEYDY +P+ L +LETK I+GL Sbjct: 307 EFYPNGISTSLPFDVQLELVHSMRGLENAHILRPGYAIEYDYFDPRALKASLETKAINGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+ R + D C R +Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGLNAGRYVQEKDAWCPRRDQAYLGVLVDDLVTRGVAEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F++ + LKS + Sbjct: 427 YRMFTSRAEYRLSLREDNADMRLTEIGRELGLVDDARWDAFSRKRDAVSRETERLKSTWV 486 Query: 484 TSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----CPDARKFSS------ 530 T K L +T++ K + E L P S + + C A + Sbjct: 487 TPKTLPAEEATALLGKAIEHEYSLAELLRRPGVSYDGVCGLKGGECGPAEPLADDPVLLE 546 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 + E+++I Y Y RQ E + E +P DY + LS E+ +KL+ +P Sbjct: 547 QIKEQVEIGIKYQGYIERQASEIERNDANENTRLPDGIDYREVRGLSFEVSQKLNEFRPE 606 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 + QAS+I G+TPAA++LL++++K+ Sbjct: 607 TIGQASRISGVTPAAISLLMVHLKR 631 >gi|33594724|ref|NP_882367.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bordetella parapertussis 12822] gi|81170528|sp|Q7W2I1|MNMG_BORPA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|33564800|emb|CAE39742.1| glucose inhibited division protein A [Bordetella parapertussis] Length = 639 Score = 545 bits (1404), Expect = e-153, Method: Compositional matrix adjust. Identities = 298/627 (47%), Positives = 405/627 (64%), Gaps = 17/627 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R +DVIV+GGGHAG EAA AA+ GA T L+TH T+G MSCNP+IGG+GKGHLV+E+D Sbjct: 5 REFDVIVVGGGHAGTEAALAAARAGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D AGIQFR+LN KGPAVR R QADR LYR AM+ + +Q NL + Q Sbjct: 65 ALGGAMAIATDEAGIQFRILNSSKGPAVRATRVQADRVLYRNAMRARLENQPNLWLFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + + + V Q R TVVLT GTFL G+IH+G GR GD P+NSL Sbjct: 125 VDDLMVQGDQVVGAVTQIGLRFRARTVVLTAGTFLNGLIHVGLQNYSGGRAGDPPANSLG 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTD-KITNRQIECG 241 + GRLKTGTP R+DG++I + E+Q D +P FSF+ + RQ+ C Sbjct: 185 QRLKELQLPQGRLKTGTPPRIDGRSINYSVLEEQPGDLDPVPVFSFLGKASMHPRQLPCW 244 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT TN TH II + S +YSG I+ GPRYCPSIEDKI RF ++ HQ+FLEPEGLN Sbjct: 245 ITHTNARTHEIIRGGLDRSPMYSGVIEGVGPRYCPSIEDKIHRFADKASHQVFLEPEGLN 304 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T +YPNG+ST+LP ++Q++ I ++PGLE +I+RPGYAIEYDY +P+ L TLETK IS Sbjct: 305 THEIYPNGVSTSLPFDVQYELIHSLPGLENAHILRPGYAIEYDYFDPRALKSTLETKAIS 364 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQINGTTGYEEAAAQGL+AG N+A ++ + R ++Y+GV++DDL ++GV Sbjct: 365 GLFFAGQINGTTGYEEAAAQGLLAGANAALQAQGKEPWVPRRDEAYLGVLVDDLVTRGVT 424 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAK----YIQEYNFLRS- 476 EPYRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F++ QE L+S Sbjct: 425 EPYRMFTSRAEYRLSLREDNADLRLTEIGRRLGLVDDVRWDAFSRKRDAVAQEVERLKST 484 Query: 477 LLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-------- 528 + VL + ++ ++ K + + + L P+ S + L D + Sbjct: 485 WVNPRVLPAH--AAEALLGKAIEREYSLSDLLKRPNVSYEALMQARTDEGELLAGPGVLE 542 Query: 529 SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 ++ E+++ + YA Y RQ E ++ E++ IP D DY ++ +LS E+++KL + Sbjct: 543 DDVLAEQVETQVKYAGYIARQQDEVQKHLSHEQQPIPADIDYDAVTSLSFEVRQKLKTHR 602 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIKK 615 P + QA+++ G+TPAA++LLLI++K+ Sbjct: 603 PETIGQAARVSGVTPAAISLLLIHLKR 629 >gi|167838437|ref|ZP_02465296.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia thailandensis MSMB43] Length = 657 Score = 545 bits (1404), Expect = e-153, Method: Compositional matrix adjust. Identities = 290/625 (46%), Positives = 389/625 (62%), Gaps = 15/625 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 67 GGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRVLYKQAIRHRLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IH+G GR GD + SL + Sbjct: 127 DLMVEGDRVVGAVTQVGVRFRARAVVLTAGTFLDGKIHVGLNHYTGGRAGDPAAVSLSSR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQIECGIT 243 + GRLKTGTP R+DG+TI + K E+Q D IP FSF+ + +Q+ C +T Sbjct: 187 LKELKLPQGRLKTGTPPRIDGRTIDFSKLEEQPGDLDPIPVFSFLGRAEQHPQQLPCWVT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T+ Sbjct: 247 HTNERTHDIIRSGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP ++Q + ++ GLE+ +I+RPGYAIEYDY +P+ L +LETK I GL Sbjct: 307 EFYPNGISTSLPFDVQLALVHSMRGLEQAHILRPGYAIEYDYFDPRALKSSLETKAIHGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ R + + + C R +Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGINAGRYAQEKEAWCPRRDQAYLGVLVDDLVTRGVSEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F + + L++ + Sbjct: 427 YRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDDVRWDAFNRKRDAVSRETERLRTTWV 486 Query: 484 TSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSIC--------PDARK--FSS 530 T K L +T++ K + E L P S + + P A + Sbjct: 487 TPKTLPADEATALLGKPIDHEYSLAELLRRPGVSYDGVCGLRGGEYGPSEPLAEDGLLLA 546 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 + E+++I Y Y RQ E + E +P DY+ + LS E+ +KL+ +P Sbjct: 547 QIKEQIEIGIKYQGYIERQAGEIERNGANENTRLPDGIDYTEVRGLSFEVSQKLNQFRPE 606 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 + QAS+I GMTPAA++LL++++KK Sbjct: 607 TIGQASRISGMTPAAISLLMVHLKK 631 >gi|188989799|ref|YP_001901809.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Xanthomonas campestris pv. campestris str. B100] gi|205831571|sp|B0RMP9|MNMG_XANCB RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|167731559|emb|CAP49734.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Xanthomonas campestris pv. campestris] Length = 634 Score = 545 bits (1404), Expect = e-153, Method: Compositional matrix adjust. Identities = 290/630 (46%), Positives = 394/630 (62%), Gaps = 30/630 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAG EAA AA+ GA T L+TH T+G+MSCNPAIGG+GKGHLV+EIDAL Sbjct: 8 YDVIVIGGGHAGTEAALAAARAGARTLLLTHNIETVGAMSCNPAIGGIGKGHLVKEIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + AD AGIQ+R LN KGPAVR R QADR LYR A++R + +Q NL V Q V Sbjct: 68 GGAMAKAADLAGIQWRTLNASKGPAVRATRCQADRNLYRSAIRRIVEAQPNLTVFQAAVD 127 Query: 126 GF-----NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 E + + ++ Q + VVLT GTFL G IH+G+ + AGRMGD P+ Sbjct: 128 DLIIHNGAAEGDSVRGVITQTGLRFEATAVVLTAGTFLAGKIHVGETQYAAGRMGDPPAT 187 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM---TDKITNRQ 237 +L + F RLKTGTP R+DG+T+ + ++Q D+ L SFM +D T Q Sbjct: 188 TLAARLRERPFAIDRLKTGTPPRIDGRTLDYTMMDEQPGDDPLPVMSFMGQVSDHPT--Q 245 Query: 238 IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 + C IT T +TH II + S +YSG I+ GPRYCPSIEDK+VRF ++ HQIF+EP Sbjct: 246 VSCWITHTTEQTHDIIRGALHRSPLYSGQIEGIGPRYCPSIEDKVVRFADKTSHQIFVEP 305 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EGL+ +YPNGIST+LP ++Q +R+I G + +I RPGYAIEYD+ +P+ L +LET Sbjct: 306 EGLDVTEIYPNGISTSLPFDVQLALVRSIRGFAQAHITRPGYAIEYDFFDPRGLKASLET 365 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 K + GLF AGQINGTTGYEEAAAQGL+AG+N+AR L R ++Y+GV++DDL + Sbjct: 366 KAVGGLFFAGQINGTTGYEEAAAQGLLAGLNAARHVQALPAWSPRRDEAYLGVLVDDLIT 425 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL 477 G EPYRMFTSRAEYR+ LR DNAD RLT +G +G + + R RF+ + + Sbjct: 426 HGTTEPYRMFTSRAEYRLQLREDNADLRLTGVGRAMGLVDDARWARFSSKQEAVQRETAR 485 Query: 478 LKSLVLTSKN------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI------CPDA 525 L +L T N + + + ++ + + P+ S L + DA Sbjct: 486 LSALWATPGNALGREVVDTLGVPMSRETNV---LDLIKRPELSYAALMRVPTLGPGVDDA 542 Query: 526 RKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 + V E+++I YA Y RQ E + E IP+ FDY+ + LS E+++KL Sbjct: 543 Q-----VAEQVEIGVKYAGYLDRQRDEIARQQRHETTPIPEGFDYAGVRGLSMEVQQKLE 597 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 ++P ++ QA +I GMTPAA++LLL+++++ Sbjct: 598 RVRPQSIGQAQRIPGMTPAAISLLLVHLER 627 >gi|323697939|ref|ZP_08109851.1| glucose inhibited division protein A [Desulfovibrio sp. ND132] gi|323457871|gb|EGB13736.1| glucose inhibited division protein A [Desulfovibrio desulfuricans ND132] Length = 627 Score = 545 bits (1404), Expect = e-153, Method: Compositional matrix adjust. Identities = 283/619 (45%), Positives = 379/619 (61%), Gaps = 7/619 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 I +D+IV+G GHAGCEAA +A+LG T L+T IG +SCNPAIGGL KGH+V+E Sbjct: 7 IPAEFDLIVVGAGHAGCEAAMASARLGLKTLLLTINVDRIGHLSCNPAIGGLAKGHMVKE 66 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G+MG ADAAGIQFR+LN +KGPAVR R Q DR Y +QR + SQENL V Q Sbjct: 67 IDALGGMMGLWADAAGIQFRILNTRKGPAVRSSRAQIDRAEYMRVVQRSVFSQENLWVFQ 126 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 A TE +S + + + V+LTTGTFLRG++HIG GRMGD +NS Sbjct: 127 DMGAAVLTENGAVSGLRTELGEVFPARAVLLTTGTFLRGLMHIGLEHFSGGRMGDPAANS 186 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L S + FD GRLKTGT RL +I + ++Q D+ PFSF + Q+ C Sbjct: 187 LSASLRELGFDLGRLKTGTTPRLLRDSIDFSAMQEQPGDDPPTPFSFRNRTVPLPQVSCW 246 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN H I S +++G I+ G RYCPSIEDK+ RF E++ HQIF+EPEGL+ Sbjct: 247 LTYTNERAHEAIRSGFDRSPMFTGIIEGTGARYCPSIEDKVARFPEKDRHQIFVEPEGLH 306 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 + +YP+GI T+LP ++Q + IR I GLE I+RPGYAIEYD++ P +L PTLETK + Sbjct: 307 SPEMYPSGIPTSLPFDVQKKMIRAIRGLENAQIVRPGYAIEYDFVPPTQLRPTLETKAVP 366 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GL+ AGQINGT+GYEEAAAQGL A +N+A K + SR +Y+ V++DDL +KG Sbjct: 367 GLYCAGQINGTSGYEEAAAQGLWAALNAACKLLGREPFLLSRDQAYMAVLVDDLVTKGTE 426 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAE+R+ LR NAD RLTP+G LG + + + + F ++ + + S+ Sbjct: 427 EPYRMFTSRAEHRLLLREGNADERLTPVGRDLGLVDDDQWRLFTAKQEKLQAVLEAMHSI 486 Query: 482 VL-----TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 + T + L S S GK L P I L CP+ V+ Sbjct: 487 RIRPDAATRETLESIGASVP--GKAVELASLLRQPQMDIDRLAVFCPELAGLDREVLCEA 544 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +++ Y Y +Q + K E +++P+D DY S+ L+ E+ EKLS ++P L QA Sbjct: 545 EVQVRYEGYLVKQEELVAKFKSLEDKVLPEDLDYGSVSGLTREVVEKLSRIQPRTLGQAG 604 Query: 597 KIEGMTPAALNLLLIYIKK 615 +I G+TPAAL L I++KK Sbjct: 605 RISGVTPAALACLEIHLKK 623 >gi|302340303|ref|YP_003805509.1| glucose inhibited division protein A [Spirochaeta smaragdinae DSM 11293] gi|301637488|gb|ADK82915.1| glucose inhibited division protein A [Spirochaeta smaragdinae DSM 11293] Length = 619 Score = 545 bits (1404), Expect = e-152, Method: Compositional matrix adjust. Identities = 275/618 (44%), Positives = 391/618 (63%), Gaps = 9/618 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R YD +VIGGGHAG EAA A+L T LIT IG +SCNPA+GGL KG++VRE+D Sbjct: 3 RDYDAVVIGGGHAGIEAALALARLSHRTLLITQSLDAIGRLSCNPAVGGLSKGNIVREVD 62 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G MG + DA IQFR+LN ++GPAV+ PR QAD+ Y L + + Q LD+ Q Sbjct: 63 ALGGEMGHLIDATMIQFRILNQRRGPAVQAPRAQADKFAYNLLAKETLEKQPGLDLYQDT 122 Query: 124 VAGFNTEKNI------ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 V E +I I + I +VVLTTGTF+ G + IG + +GR+G+ Sbjct: 123 VTDLVIEGDIALGGARIVGVRTDRGQEISTRSVVLTTGTFMEGKVFIGSWEASSGRLGEP 182 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ 237 + L ++ F GR+KTGTPAR+ ++ +DK E+Q DE ++PFSF D I + Sbjct: 183 AAIGLGSALRAKGFHLGRMKTGTPARVAASSLDYDKMEEQKGDELMLPFSFSHDTIDRPE 242 Query: 238 IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 C IT TN +TH +I EN+ S +Y G I GPRYCPSIEDK+VRF +R HQIF+EP Sbjct: 243 RSCWITYTNEKTHSLISENLGTSPLYGGKIVGKGPRYCPSIEDKVVRFPDRQRHQIFVEP 302 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EGL+T+ +Y NGIS++LPE +Q QFI ++PGLE+ I+RPGYA+EYDYI+P++LFP+L+T Sbjct: 303 EGLHTEEMYLNGISSSLPEWVQEQFIHSVPGLERAVIMRPGYAVEYDYIDPRQLFPSLQT 362 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 K ++GLF+AGQ NGT+GYEEAA QGL+AGIN++ D + SR ++Y GV+IDDL + Sbjct: 363 KAVAGLFIAGQTNGTSGYEEAACQGLLAGINASLLMRGEDLLVLSRAEAYAGVLIDDLVT 422 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL 477 G EPYRMFTSRAEYR++LR D AD RL P+G ++G + + K ++ ++ L Sbjct: 423 LGTEEPYRMFTSRAEYRLNLRHDTADRRLLPLGHRIGLQNDDAMEALNKRLEGEAAIKEL 482 Query: 478 LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 L S L S + +S Q+GK + L P+ SI L + P+ F + R Sbjct: 483 LASRRLRSSEAAGLDLS-GQEGK--KFLDLLKVPEVSIDMLVPLQPELEAFPDKWLRRAA 539 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 ++ Y Y RQ + + E IP DF+++++ +SNE +EKL ++P ++ QAS+ Sbjct: 540 LDIRYEGYIRRQDEQVDRFQRMEGLKIPADFNWNTIEGISNESREKLKQIRPLSVGQASR 599 Query: 598 IEGMTPAALNLLLIYIKK 615 I G+ + + +L++ +++ Sbjct: 600 ISGVRSSDIAVLMVMLRR 617 >gi|229065142|ref|ZP_04200435.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus AH603] gi|228716171|gb|EEL67890.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus AH603] Length = 629 Score = 545 bits (1404), Expect = e-152, Method: Compositional matrix adjust. Identities = 287/618 (46%), Positives = 393/618 (63%), Gaps = 7/618 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDAL Sbjct: 8 YDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 68 GGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLFQGLVE 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + ++ Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 128 RLIIEDGVCKGVITQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSEH 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T T Sbjct: 188 LEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTYT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 + ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT V Sbjct: 248 STETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQEV 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 308 YVQGLSTSLPEDVQRAMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLYT 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPYR Sbjct: 368 AGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVILGRADAYIGVLIDDLVTKGTNEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFA----KYIQEYNFLRSL-LKS 480 + TSRAEYR+ LR DNAD RLT +G ++G I E R +RF + QE L S+ +K Sbjct: 428 LLTSRAEYRLLLRHDNADLRLTEVGREIGLIKEDRYERFTNKKLQIEQEKERLESIFIKP 487 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + + S S +DG A + L P+ + +++ + P S + E+++I++ Sbjct: 488 RPEVQELIRSIGGSELKDGI--RASDLLRRPEVTYEHIHLLVPSEVALSDEITEQVEIQT 545 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS+I G Sbjct: 546 KYEGYIEKSLQQVERMKKMENKKIPVDIDYDAISSLASEARQKLKDVRPLSMGQASRISG 605 Query: 601 MTPAALNLLLIYIKKNTV 618 + PA +++LLIYI++ + Sbjct: 606 VNPADVSILLIYIEQGKI 623 >gi|160895496|ref|YP_001561078.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Delftia acidovorans SPH-1] gi|238687175|sp|A9BQJ1|MNMG_DELAS RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|160361080|gb|ABX32693.1| glucose inhibited division protein A [Delftia acidovorans SPH-1] Length = 659 Score = 545 bits (1404), Expect = e-152, Method: Compositional matrix adjust. Identities = 289/639 (45%), Positives = 398/639 (62%), Gaps = 23/639 (3%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DVIV+GGGHAG EAA AA++G T L++H T+G MSCNP+IGG+GKGHLV+E+D Sbjct: 5 QEFDVIVVGGGHAGTEAALAAARMGCRTLLLSHNIETLGQMSCNPSIGGIGKGHLVKEVD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 65 ALGGAMALATDIGGIQFRILNSSKGPAVRATRAQADRILYKAAIRDMLENQPNLWLFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + + V Q R TVVLT GTFL G IH+G AGR GD P+ SL Sbjct: 125 VDDLMVEGDRVVGAVTQVGVRFRSRTVVLTAGTFLDGKIHVGLNNYAAGRAGDPPAVSLS 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFAD-------ERLIP-FSFMTDKITN 235 + + GRLKTGTP RLDG++I + + E+Q D E ++P FSF+ + + Sbjct: 185 SRLKELQLPQGRLKTGTPPRLDGRSIDFSQCEEQPGDGMPGGVNEGVLPVFSFIGNAAMH 244 Query: 236 -RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 RQ+ C IT TN TH II S +++G I+ GPRYCPS+EDKI RF ++ HQIF Sbjct: 245 PRQMPCWITHTNERTHDIIRSGFDRSPMFTGKIEGVGPRYCPSVEDKINRFADKESHQIF 304 Query: 295 LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT 354 LEPEGL T+ YPNGIST+LP +IQ++ +R++ GLE +I+RPGYAIEYDY +P+ L + Sbjct: 305 LEPEGLTTNEFYPNGISTSLPFDIQYELVRSMKGLENAHILRPGYAIEYDYFDPRSLKSS 364 Query: 355 LETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDD 414 ET++I GLF AGQINGTTGYEEAAAQGL AG+N+A + + R ++Y+GV++DD Sbjct: 365 FETRQIQGLFFAGQINGTTGYEEAAAQGLFAGLNAALQCRGQEAWLPRRDEAYLGVLVDD 424 Query: 415 LTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFL 474 L +KGV EPYRMFTSRAE+R+ LR DNAD RLT G +G + + R F++ + Sbjct: 425 LITKGVTEPYRMFTSRAEFRLQLREDNADMRLTEAGRAMGLVDDARWDAFSRKRDAVSRE 484 Query: 475 RSLLKSLVLTSKNLS---STSISFKQDGKTRTAYEFLSYPDFSIQNLFS----------I 521 LKS + + ++ S + K + ++ L PD L S + Sbjct: 485 TERLKSTWVNPRIVTPEESERVLGKSIEREYNLFDLLRRPDVGYGKLMSLNEGRYASADV 544 Query: 522 CPDA-RKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNEL 580 PD S+ V+E+++I + YA Y RQ E + E +P + DY +PALS E+ Sbjct: 545 QPDVLGDLSASVVEQVEIAAKYAGYIDRQKDEVQRAAHFENLRLPAELDYMQVPALSFEV 604 Query: 581 KEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 ++ L +P L QAS++ G+TPAA++LL++++KK + Sbjct: 605 RQSLQKHRPETLGQASRMSGVTPAAISLLMVHLKKGGFR 643 >gi|70727674|ref|YP_254590.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus haemolyticus JCSC1435] gi|81170579|sp|Q4L2Z3|MNMG_STAHJ RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|68448400|dbj|BAE05984.1| glucose inhibited division protein A [Staphylococcus haemolyticus JCSC1435] Length = 625 Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust. Identities = 281/621 (45%), Positives = 396/621 (63%), Gaps = 7/621 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VREID Sbjct: 3 QEYDVIVIGAGHAGIEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVREID 62 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R I ++NLD++QG Sbjct: 63 ALGGQMAKAIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEDNLDIMQGM 122 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E N + + + R VV+TTGTFLRG I +G +K +G PS +L Sbjct: 123 VDELIIEDNEVKGVRTNIGTEYRAQAVVITTGTFLRGEIILGNMKYSSGPNHQLPSITLA 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 ++ + F+ R KTGTP R++ KTI + KTE Q D+ FSF T + Q+ C +T Sbjct: 183 DNLRELGFEVVRFKTGTPPRVNAKTIDYSKTEIQPGDDVGRAFSFETTEYILDQLPCWLT 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG NT+ Sbjct: 243 YTNDRTHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRNTN 302 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETK I L Sbjct: 303 EVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKMIKNL 362 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGT+GYEEAA QG++AGIN+A K SR+D+YIGV+IDDL +KG EP Sbjct: 363 YTAGQINGTSGYEEAAGQGIMAGINAAGKVLGTGEKILSRSDAYIGVLIDDLVTKGTNEP 422 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G +LG I E R RF + Q+ L + + Sbjct: 423 YRLLTSRAEYRLLLRHDNADLRLTDVGYELGMISEERYARFNEKRQQIQDEIQRLTDIRI 482 Query: 484 TSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 + + I + +G +R A + L P+ + + I ++ + V E+++I Sbjct: 483 KPNEHTQSVI--EANGGSRLKDGILAIDLLRRPEMTYNTILEILEESHQLPEAVEEQVEI 540 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 ++ Y Y + + + +++K E++ IP+D DYS + +L+ E +EKL+ +KP N+ QAS+I Sbjct: 541 QTKYEGYINKSLQQVEKVKRMEEKKIPEDLDYSKVDSLATEAREKLAEVKPLNIAQASRI 600 Query: 599 EGMTPAALNLLLIYIKKNTVK 619 G+ PA +++LL+Y+++ ++ Sbjct: 601 SGVNPADISILLVYLEQGKLQ 621 >gi|83719253|ref|YP_443812.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Burkholderia thailandensis E264] gi|167620986|ref|ZP_02389617.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia thailandensis Bt4] gi|123536041|sp|Q2STD7|MNMG_BURTA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|83653078|gb|ABC37141.1| glucose-inhibited division protein A [Burkholderia thailandensis E264] Length = 657 Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust. Identities = 288/625 (46%), Positives = 390/625 (62%), Gaps = 15/625 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q V Sbjct: 67 GGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRVLYKQAIRRYLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IH+G GR GD + SL + Sbjct: 127 DLMVEGDRVVGAVTQVGVRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSSR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQIECGIT 243 + GRLKTGTP R+DG+TI + K E+Q D +P FSF+ + Q+ C +T Sbjct: 187 LKELKLPQGRLKTGTPPRIDGRTIDFSKLEEQPGDLDPVPVFSFLGRPEQHPEQLPCWVT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T+ Sbjct: 247 HTNERTHDIIRSGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP ++Q + ++ GLE+ +I+RPGYAIEYDY +P+ L +LETK I+GL Sbjct: 307 EFYPNGISTSLPFDVQLALVHSMRGLEQAHILRPGYAIEYDYFDPRALKSSLETKAINGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ R + + + C R +Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGINAGRHALEKEAWCPRRDQAYLGVLVDDLVTRGVSEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F + + L++ + Sbjct: 427 YRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDDVRWDAFNRKRDAVSRETERLRTTWV 486 Query: 484 TSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----CPDARKFS------S 530 T K L +T + K + E L P S + + C + + + Sbjct: 487 TPKTLPADEATELLGKPIDHEYSLAELLRRPGISYDGVCGLRGGECGPSEPLAEDALLLA 546 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 + E+++I Y Y RQ E + E +P DY+ + LS E+ +KL+ +P Sbjct: 547 QIKEQIEIGIKYQGYIERQAGEIERNGANENTRLPDGIDYTEVRGLSFEVSQKLNQFRPE 606 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 + QAS+I G+TPAA++LL++++KK Sbjct: 607 TIGQASRISGVTPAAISLLMVHLKK 631 >gi|239828706|ref|YP_002951330.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Geobacillus sp. WCH70] gi|239808999|gb|ACS26064.1| glucose inhibited division protein A [Geobacillus sp. WCH70] Length = 629 Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust. Identities = 285/619 (46%), Positives = 394/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+G GHAGCEAA AA++GA T +IT I M CNP+IGG KG +VREIDA Sbjct: 7 SYDVIVVGAGHAGCEAALAAARIGAKTLVITLNLDMIAFMPCNPSIGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M + D IQ R+LN KGPAVR R QAD+ LY+ M++ + +QENL ++QG+V Sbjct: 67 LGGEMAKNIDKTYIQMRMLNTGKGPAVRALRAQADKVLYQREMKKTLENQENLTLLQGKV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + +V Q + TVV+TTGTFLRG I IG +K +G PS L Sbjct: 127 ERLIVEDGVCKGVVTQTGAHYYAKTVVITTGTFLRGEIIIGDIKYSSGPNNQQPSIKLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F+ R KTGTP R++ +TI + KTE Q D+ FS+ T + Q+ C +T Sbjct: 187 HLEELGFELVRFKTGTPPRVNSRTIDYSKTEIQPGDDVPRAFSYETTEYITDQLPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETHRII EN+ S +YSG IK GPRYCPSIEDKIVRF ++ HQIFLEPEG T+ Sbjct: 247 TTPETHRIIDENLHLSPMYSGMIKGTGPRYCPSIEDKIVRFHDKPRHQIFLEPEGRETEE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE IQ Q + TIPGLEK ++R GYAIEYD I P +L+PTLETK + L+ Sbjct: 307 VYVQGLSTSLPEHIQRQLLTTIPGLEKAQLMRAGYAIEYDAIVPTQLWPTLETKLVKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QG++AGIN+A ++ + I SR+D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGIIAGINAAHRAFGKEEIILSRSDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G K+G I E R ++F + + LKS ++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTELGYKIGLISEERYQKFLAKKEAIEREKKRLKSYII- 485 Query: 485 SKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 K +Q G + A + L P+ + +++ + P + S V E+++I+ Sbjct: 486 -KPTKEVQDVIRQAGGSELKDGIRAADLLRRPEMTYEHIKQLAPAEEEISPEVAEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + + +K E + IP+D DY ++ L+ E ++KL ++P ++ QAS+I Sbjct: 545 IKYEGYIQKSLQQVERLKKMENKKIPEDIDYDAIHGLATEARQKLKQVRPLSIAQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+Y+++ + Sbjct: 605 GVNPADISILLVYLEQGRI 623 >gi|326386156|ref|ZP_08207780.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Novosphingobium nitrogenifigens DSM 19370] gi|326209381|gb|EGD60174.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Novosphingobium nitrogenifigens DSM 19370] Length = 614 Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust. Identities = 279/615 (45%), Positives = 397/615 (64%), Gaps = 2/615 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DVIV+GGGHAG EAAAVAA++GA AL++ + IG+MSCNPAIGGLGKGHLVRE+D Sbjct: 2 QQFDVIVVGGGHAGVEAAAVAARMGARIALVSFDPAMIGAMSCNPAIGGLGKGHLVREVD 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 A DG+M R ADA I +R+LN KG AV+GPR QADR +R A+Q I +Q+ L VI GE Sbjct: 62 AFDGIMARAADAGAIHYRMLNRSKGSAVQGPRIQADRRRFRAAVQAAIAAQDGLTVIGGE 121 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + + + + + + S VVL TGTFL G ++ G+ ++ GR+G++ ++ L Sbjct: 122 VVALQMEGGRAAGVELANGTCLGASAVVLCTGTFLGGRLYRGEERMEGGRIGEAAAHRLA 181 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 RLKTGTP RLDG+TI W + +Q +D S + Q+ CGI Sbjct: 182 QQLRDAALPMARLKTGTPPRLDGRTIDWGRLPEQPSDPEPWTMSPLGKGRVLPQVFCGIA 241 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 RTN TH II + S +++G I++ GPRYCPSIEDKI RFG+R+GHQIFLEPEGL+ Sbjct: 242 RTNQRTHEIIRGGLDRSPLFTGAIEAQGPRYCPSIEDKIHRFGDRDGHQIFLEPEGLDDH 301 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNG+ST+LP ++Q +R++ GLE+V + PGYA+EYD+I+P+ L +LE K I GL Sbjct: 302 TVYPNGVSTSLPTDVQIAMMRSVEGLEQVEVTVPGYAVEYDHIDPRALRSSLEVKAIPGL 361 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ+NGTTGYEEAAAQGLVAG+++A + + R +SY+ VMIDDLT GV EP Sbjct: 362 FFAGQLNGTTGYEEAAAQGLVAGLHAAGQVLGREIPLLDRANSYMAVMIDDLTLHGVSEP 421 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRM T+RAEYR+ LR +NA +RLTP+ + GC+G R++ FA+ E + L Sbjct: 422 YRMLTARAEYRLRLRANNAGSRLTPLALAAGCVGPERREWFARREAERARIDEALTQTA- 480 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 T L+ ++ + DG R+ E+L +P+ ++ L + L+ E ++ +++YA Sbjct: 481 TPNELTQAGMAVRADGARRSLGEWLRFPEVTLAGLSPWLGEG-AIDPLLAEEMEEDAAYA 539 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y RQ E ++++ E + DF ++ +P LS E+ E+L+ +P L A ++ G+TP Sbjct: 540 PYLARQEAELRDLRASELVALGDDFPFADVPGLSREMVERLAQARPETLAAAGRVPGITP 599 Query: 604 AALNLLLIYIKKNTV 618 AAL LL++ ++ Sbjct: 600 AALASLLVHARRRAA 614 >gi|73663752|ref|YP_302533.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|123641434|sp|Q49UI5|MNMG_STAS1 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|72496267|dbj|BAE19588.1| glucose inhibited division protein A [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 625 Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust. Identities = 283/626 (45%), Positives = 397/626 (63%), Gaps = 17/626 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VREID Sbjct: 3 QEYDVIVIGAGHAGIEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVREID 62 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M + D IQ R+LN KGPAVR R QAD+ LY+ M++ I + NLD++QG Sbjct: 63 ALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKKVIEDEANLDIMQGM 122 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E ++I + + V++TTGTFLRG I +G +K +G PS SL Sbjct: 123 VDDLIIEDDVIKGVRTNIGTEYWSEAVIITTGTFLRGEIILGNMKYSSGPNHQLPSISLA 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 ++ F+ R KTGTP R++ KTI + KTE Q D+ FSF T + Q+ C +T Sbjct: 183 DNLRGLGFEVVRFKTGTPPRVNAKTIDYSKTEIQPGDDVGRAFSFETTEYILDQLPCWLT 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG NT+ Sbjct: 243 YTNGDTHQVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRNTN 302 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD + P +L+PTLETKKI L Sbjct: 303 EVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDALVPTQLWPTLETKKIKNL 362 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGT+GYEEAA QG++AGIN+A + D + SR+D+YIGV+IDDL +KG EP Sbjct: 363 YTAGQINGTSGYEEAAGQGIMAGINAAARVQGKDEVILSRSDAYIGVLIDDLITKGTNEP 422 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL-- 481 YR+ TSRAEYR+ LR DNAD RLT +G +LG I E R RF N R+++K+ Sbjct: 423 YRLLTSRAEYRLLLRHDNADLRLTDLGYELGMISEERYARF-------NEKRAMIKAEQE 475 Query: 482 ----VLTSKNLSSTSISFKQDGKTRT----AYEFLSYPDFSIQNLFSICPDARKFSSLVI 533 + N I Q G A E L P+ + + I ++ + S V Sbjct: 476 RLNGIRVKPNDRVQEIIEAQGGSRLKDGILALELLRRPEMTYDLILEILDESHQLPSDVE 535 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I++ Y Y + + + +++K E++ IP+D DYS + +L+ E +EKL+ +KP N+ Sbjct: 536 EQVEIQTKYEGYINKSLQQVEKVKRMEEKKIPEDLDYSKVDSLATEAREKLAEVKPLNIA 595 Query: 594 QASKIEGMTPAALNLLLIYIKKNTVK 619 QAS+I G+ PA +++LL+Y+++ ++ Sbjct: 596 QASRISGVNPADISILLVYLEQGKIQ 621 >gi|42784679|ref|NP_981926.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus ATCC 10987] gi|206975823|ref|ZP_03236734.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus H3081.97] gi|217962975|ref|YP_002341553.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus AH187] gi|222098960|ref|YP_002533018.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gida [Bacillus cereus Q1] gi|229142232|ref|ZP_04270756.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus BDRD-ST26] gi|229199693|ref|ZP_04326336.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus m1293] gi|81170515|sp|Q72WU4|MNMG_BACC1 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|42740611|gb|AAS44534.1| glucose-inhibited division protein A [Bacillus cereus ATCC 10987] gi|206745917|gb|EDZ57313.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus H3081.97] gi|217067770|gb|ACJ82020.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus AH187] gi|221243019|gb|ACM15729.1| glucose-inhibited division protein A [Bacillus cereus Q1] gi|228583788|gb|EEK41963.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus m1293] gi|228641250|gb|EEK97557.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus BDRD-ST26] Length = 629 Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust. Identities = 285/622 (45%), Positives = 393/622 (63%), Gaps = 13/622 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEDGECKGVITQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVILGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT IG ++G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEIGHEIGLIKEERYERFTNKKLQIEQEKERLSSIIIK 486 Query: 485 S--------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 +N+ + + +DG A + L P+ + +++ + P + S V E++ Sbjct: 487 PRPEVQELIRNIGGSEL---KDGI--RASDLLRRPEMTYEHIHLLVPSEVELSDEVTEQV 541 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS Sbjct: 542 EIQIKYEGYIEKSLQQVERMKKMESKKIPVDIDYDAISSLASEARQKLKDVRPLSVGQAS 601 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+ PA +++LL+YI++ + Sbjct: 602 RISGVNPADISILLVYIEQGKI 623 >gi|51244704|ref|YP_064588.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Desulfotalea psychrophila LSv54] gi|81170536|sp|Q6APZ2|MNMG_DESPS RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|50875741|emb|CAG35581.1| probable glucose inhibited division protein A [Desulfotalea psychrophila LSv54] Length = 647 Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust. Identities = 303/642 (47%), Positives = 399/642 (62%), Gaps = 37/642 (5%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D++VIG GHAGCEAA AA+LG T L TIG+MSCNPAIGGL KGHLVREIDAL Sbjct: 16 FDIVVIGAGHAGCEAALAAARLGHKTLLAVMNVDTIGAMSCNPAIGGLAKGHLVREIDAL 75 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M RV DA IQFR LN KGPAV+ R QADR LYRL M+ I QENL V Q EV Sbjct: 76 GGEMARVIDATSIQFRRLNTSKGPAVQSSRAQADRLLYRLQMKSVIEHQENLTVSQTEVN 135 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 GF E I+ + + I ++ TGTFL G++HIG PAGR+GD PS L + Sbjct: 136 GFIVEDGKITGVTTTIDEKISVKAAIVATGTFLNGLVHIGLKNFPAGRLGDGPSTGLADW 195 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK--ITNRQIECGIT 243 F F GR+KTGT R+D TI + + E Q +D FSF + T Q+ C IT Sbjct: 196 FYDNGFAVGRMKTGTVPRIDSLTIDYSELEAQESDMPPAHFSFDSQGKGYTLPQLPCYIT 255 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH II + I S +Y+G I+ G RYCPSIEDKI+RF E++ HQ+FLEPEGL+T Sbjct: 256 YTNEKTHEIIRKGIDQSPLYAGIIQGIGARYCPSIEDKIMRFPEKDRHQVFLEPEGLDTV 315 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNG+ T+LP E+Q + +++I GLE IIRPGYAIEYDYI+P L P+L TKKI L Sbjct: 316 EVYPNGLPTSLPLEVQIEMLQSIKGLENARIIRPGYAIEYDYIDPLGLRPSLATKKIENL 375 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 +LAGQINGT+GYEEAAAQGL+AGIN+ R + + + R+ +YIGV+IDDL + G EP Sbjct: 376 YLAGQINGTSGYEEAAAQGLMAGINATRYLEEREPLILDRSQAYIGVLIDDLVTCGTKEP 435 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+FTSRAEYR+ LR DNAD+RL IG +G + E + +R+ L+K + Sbjct: 436 YRLFTSRAEYRLLLREDNADSRLCQIGKDIGLLDEDKHQRY------------LIKQAAI 483 Query: 484 TSKNLSSTSISFK--------------QDGKTRTAY-EFLSYPDFSI---QNLFSICPDA 525 + + +IS K D K ++A L P+ +I Q L D Sbjct: 484 DAGCATLDAISIKPTAEVNRILNDAASADLKQKSALSSLLRRPEINITFLQKLPLTAGDK 543 Query: 526 RKF----SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELK 581 +S V + +Q+ + Y RQ + + K E +P+D +Y+ L LSNE+ Sbjct: 544 EAVIALANSAVCQEVQVRIKFKGYLQRQEEQVQRFKRMETLKLPEDLNYAQLSGLSNEVV 603 Query: 582 EKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK-NTVKLNE 622 EKLS ++P +L QAS+I G+TPAA+++L ++++K N +K N+ Sbjct: 604 EKLSTIRPISLGQASRISGITPAAVSVLQVHLRKLNYLKSND 645 >gi|293367585|ref|ZP_06614238.1| glucose inhibited division protein A [Staphylococcus epidermidis M23864:W2(grey)] gi|291318298|gb|EFE58691.1| glucose inhibited division protein A [Staphylococcus epidermidis M23864:W2(grey)] gi|329736135|gb|EGG72408.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus epidermidis VCU045] Length = 625 Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust. Identities = 278/619 (44%), Positives = 395/619 (63%), Gaps = 3/619 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDV+VIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VREID Sbjct: 3 QEYDVVVIGAGHAGIEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVREID 62 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R + +++NLD++QG Sbjct: 63 ALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVLENEDNLDIMQGM 122 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E N + + + R V++TTGTFLRG I +G LK +G PS +L Sbjct: 123 VDELIIEDNEVKGVRTNIGTEYRSKAVIITTGTFLRGEIILGNLKYSSGPNHQLPSVTLA 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 ++ K FD R KTGTP R++ +TI + KTE Q D+ FSF T + Q+ C +T Sbjct: 183 DNLRKLGFDIVRFKTGTPPRVNARTIDYSKTEIQPGDDIGRAFSFETTEFILNQLPCWLT 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG NT+ Sbjct: 243 YTNGDTHQVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRNTN 302 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETK I L Sbjct: 303 EVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKAIKNL 362 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGT+GYEEAA QG++AGIN+A SR+D+YIGV+IDDL +KG EP Sbjct: 363 YTAGQINGTSGYEEAAGQGIMAGINAAGNVLGTGEKILSRSDAYIGVLIDDLVTKGTNEP 422 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G +LG I E R RF + Q+ L + + Sbjct: 423 YRLLTSRAEYRLLLRHDNADLRLTDMGYELGLISEERYARFNEKRQQIKDEIQRLTDVRI 482 Query: 484 TSKNLSSTSISFKQDGKTRT---AYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + I K + + A + L P+ + + + I ++ + V E+++I++ Sbjct: 483 KPNEHTQAIIEAKGGSRLKDGILAIDLLRRPEMNYETILEILEESHQLPEAVEEQVEIQT 542 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y + + + +++K E + IP+D DYS + +L++E +EKL+ +KP N+ QAS+I G Sbjct: 543 KYEGYINKSLQQVEKVKRMEAKKIPEDLDYSKVDSLASEAREKLAEVKPLNIAQASRISG 602 Query: 601 MTPAALNLLLIYIKKNTVK 619 + PA +++LL+Y+++ ++ Sbjct: 603 VNPADISILLVYLEQGKLQ 621 >gi|115350140|ref|YP_771979.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia ambifaria AMMD] gi|122324420|sp|Q0BJM8|MNMG_BURCM RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|115280128|gb|ABI85645.1| glucose inhibited division protein A [Burkholderia ambifaria AMMD] Length = 656 Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust. Identities = 288/625 (46%), Positives = 388/625 (62%), Gaps = 15/625 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D +GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 67 GGAMAAATDESGIQFRILNSSKGPAVRATRAQADRILYKAAIRHRLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 127 DLMVEGDRVVGAVTQIGIRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQIECGIT 243 + GRLKTGTP R+DG++I + K ++Q D IP FSF+ + +Q+ C +T Sbjct: 187 LKELKLPQGRLKTGTPPRIDGRSIDFSKLDEQPGDLDPIPVFSFLGRAEQHPQQLPCWVT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPEGL T+ Sbjct: 247 HTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPEGLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP ++Q + + ++ GLE +I+RPGYAIEYDY +P+ L +LETK I+GL Sbjct: 307 EFYPNGISTSLPFDVQLELVHSMRGLENAHILRPGYAIEYDYFDPRALKASLETKAINGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+ R + D C R +Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGLNAGRYVQEKDAWCPRRDQAYLGVLVDDLVTRGVAEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F++ + LKS + Sbjct: 427 YRMFTSRAEYRLSLREDNADMRLTEIGRELGLVDDARWDAFSRKRDAVSRETERLKSTWV 486 Query: 484 TSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----CPDARKFSS------ 530 T K L +T++ K + E L P S + S+ C + Sbjct: 487 TPKTLPPEEATALLGKAIDHEYSLAELLRRPGISYDGVCSLKGGECAPTEPLADDPVLLE 546 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 + E+++I Y Y RQ E + E +P DY + LS E+ +KL+ +P Sbjct: 547 QIKEQVEIGIKYQGYIERQASEIERNDANENTRLPDGIDYREVRGLSFEVSQKLNEFRPE 606 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 + QAS+I G+TPAA++LL++++K+ Sbjct: 607 TIGQASRISGVTPAAISLLMVHLKR 631 >gi|206558428|ref|YP_002229188.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia cenocepacia J2315] gi|238693058|sp|B4E581|MNMG_BURCJ RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|198034465|emb|CAR50330.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia cenocepacia J2315] Length = 656 Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust. Identities = 288/625 (46%), Positives = 389/625 (62%), Gaps = 15/625 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D +GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 67 GGAMAAATDESGIQFRILNSSKGPAVRATRAQADRILYKAAIRHRLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IH+G GR GD + SL + Sbjct: 127 DLMVEGDRVVGAVTQIGIRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSSR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQIECGIT 243 + GRLKTGTP R+DG+TI + K ++Q D IP FSF+ + +Q+ C +T Sbjct: 187 LKELKLPQGRLKTGTPPRIDGRTIDFSKLDEQPGDLDPIPVFSFLGRAEQHPQQLPCWVT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPEGL T+ Sbjct: 247 HTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPEGLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP ++Q + + ++ GLE +I+RPGYAIEYDY +P+ L +LETK I+GL Sbjct: 307 EFYPNGISTSLPFDVQLELVHSMRGLENAHILRPGYAIEYDYFDPRALKASLETKAINGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+ R + + C R +Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGLNAGRYVQEKEAWCPRRDQAYLGVLVDDLVTRGVAEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F++ + LKS + Sbjct: 427 YRMFTSRAEYRLSLREDNADMRLTEIGRELGLVDDARWDAFSRKRDAVSRETERLKSTWV 486 Query: 484 TSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----CPDARKFSS------ 530 T K L +T++ K + E L P S + + C A + Sbjct: 487 TPKTLPAEEATALLGKAIDHEYSLAELLRRPGVSYDGVCGLKGGECGPAEPLTDDPVLLE 546 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 + E+++I Y Y RQ E + E +P DY + LS E+ +KL+ +P Sbjct: 547 QIKEQVEIGIKYQGYIERQASEIERNDANENTRLPDGIDYREVRGLSFEVSQKLNEFRPE 606 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 + QAS+I G+TPAA++LL++++K+ Sbjct: 607 TIGQASRISGVTPAAISLLMVHLKR 631 >gi|196036098|ref|ZP_03103498.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus W] gi|218906675|ref|YP_002454509.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus AH820] gi|195991265|gb|EDX55233.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus W] gi|218539382|gb|ACK91780.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus AH820] Length = 629 Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust. Identities = 284/622 (45%), Positives = 394/622 (63%), Gaps = 13/622 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEDGECKGVITQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVILGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G ++G I E R +RF + ++ L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEVGHEIGLITEERYERFTNKKLQIEQEKARLSSIIIK 486 Query: 485 S--------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 +N+ + + +DG A + L P+ + +++ + P + S V E++ Sbjct: 487 PRPEVQELIRNIGGSEL---KDGI--RASDLLRRPEMTYEHIHLLVPSEVELSDEVKEQV 541 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS Sbjct: 542 EIQIKYEGYIEKSLQQVERMKKMENKKIPVDIDYDAISSLASEARQKLKDVRPLSMGQAS 601 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+ PA +++LL+YI++ + Sbjct: 602 RISGVNPADISILLVYIEQGKI 623 >gi|329735765|gb|EGG72046.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus epidermidis VCU028] Length = 625 Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust. Identities = 278/619 (44%), Positives = 395/619 (63%), Gaps = 3/619 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDV+VIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VREID Sbjct: 3 QEYDVVVIGAGHAGIEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVREID 62 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R + +++NLD++QG Sbjct: 63 ALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVLENEDNLDIMQGM 122 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E N + + + R V++TTGTFLRG I +G LK +G PS +L Sbjct: 123 VDELIIEDNEVKGVRTNIGTEYRSKAVIITTGTFLRGEIILGNLKYSSGPNHQLPSVTLA 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 ++ K FD R KTGTP R++ +TI + KTE Q D+ FSF T + Q+ C +T Sbjct: 183 DNLRKLGFDIVRFKTGTPPRVNARTIDYSKTEIQPGDDIDRAFSFETTEFILNQLPCWLT 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG NT+ Sbjct: 243 YTNGDTHQVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRNTN 302 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETK I L Sbjct: 303 EVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKAIKNL 362 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGT+GYEEAA QG++AGIN+A SR+D+YIGV+IDDL +KG EP Sbjct: 363 YTAGQINGTSGYEEAAGQGIMAGINAAGNVLGTGEKILSRSDAYIGVLIDDLVTKGTNEP 422 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G +LG I E R RF + Q+ L + + Sbjct: 423 YRLLTSRAEYRLLLRHDNADLRLTDMGYELGLISEERYARFNEKRQQIKDEIQRLTDVRI 482 Query: 484 TSKNLSSTSISFKQDGKTRT---AYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + I K + + A + L P+ + + + I ++ + V E+++I++ Sbjct: 483 KPNEHTQAIIEAKGGSRLKDGILAIDLLRRPEMNYETILEILEESHQLPEAVEEQVEIQT 542 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y + + + +++K E + IP+D DYS + +L++E +EKL+ +KP N+ QAS+I G Sbjct: 543 KYEGYINKSLQQVEKVKRMEAKKIPEDLDYSKVDSLASEAREKLAEVKPLNIAQASRISG 602 Query: 601 MTPAALNLLLIYIKKNTVK 619 + PA +++LL+Y+++ ++ Sbjct: 603 VNPADISILLVYLEQGKLQ 621 >gi|150019906|ref|YP_001312160.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium beijerinckii NCIMB 8052] gi|205831523|sp|A6M3M4|MNMG_CLOB8 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|149906371|gb|ABR37204.1| glucose inhibited division protein A [Clostridium beijerinckii NCIMB 8052] Length = 626 Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust. Identities = 280/612 (45%), Positives = 398/612 (65%), Gaps = 3/612 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D++V+G GHAGCEAA +A+LG +T + T +I M CNP IGG KGHLVREIDAL Sbjct: 10 FDIVVVGAGHAGCEAALASARLGLNTLVCTINLDSIALMPCNPNIGGTAKGHLVREIDAL 69 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG D IQ R+LN KGPAV R QAD++ Y+ M+R + QENL + Q EV Sbjct: 70 GGEMGINIDNTFIQSRMLNTSKGPAVHSLRAQADKKSYQFRMKRILEEQENLKIRQIEVT 129 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 N E ++ +V ++ ++ +C V+L TGT+L+G I IG++ G G P+N L S Sbjct: 130 ELNVENGKVTGVVTKNGAIFKCKAVILATGTYLKGKIIIGEVSYSGGPNGLFPANDLSQS 189 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + R KTGTPAR++ +++ + K +Q D+ +IPFSFM++ I Q+ C +T T Sbjct: 190 LLDLGVSLRRFKTGTPARINRRSVDFSKMIEQNGDDNIIPFSFMSENIEREQVSCYLTYT 249 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N ET +II +NI S IY+G IK GPRYCPSIEDKI+RF ++ HQIF+EPEGL+T + Sbjct: 250 NDETRKIIRDNIGRSPIYNGSIKGVGPRYCPSIEDKIMRFPDKPQHQIFIEPEGLDTLEM 309 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G S++LPEE+Q + ++T+PGLE V ++R YAIEYD I+P +L PTLE K I GL+ Sbjct: 310 YVGGFSSSLPEEVQIKMLKTLPGLENVEMMRTAYAIEYDSIDPTQLKPTLEFKDIEGLYG 369 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ+NG++GYEEA AQGL+AGIN+A K + + + +R+D+YIGV+IDDL +KG EPYR Sbjct: 370 AGQLNGSSGYEEAGAQGLIAGINAALKIKEKEPLILTRSDAYIGVLIDDLVTKGTNEPYR 429 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 M TSRAEYR+ LR DNAD RLT +G ++G + E R +F K Q LK+L +T+ Sbjct: 430 MMTSRAEYRLLLRQDNADFRLTNLGYRVGLVTEERYDKFIKRKQNIENELERLKNLKVTN 489 Query: 486 K---NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSY 542 K N S++ + K T YE L P+ +L I + + V E++ I + Y Sbjct: 490 KKEINEFLISLNSAELRKPITFYELLQRPELDYFDLKQIDSERPELPHDVGEQINILTKY 549 Query: 543 AAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMT 602 Y Q+ + + K EK+L+PKD +YS + L E +KLS ++P ++ QA++I G++ Sbjct: 550 EGYIQSQLEQVAQFKKFEKKLLPKDINYSDIKGLRTEAIQKLSDIRPISIGQATRISGVS 609 Query: 603 PAALNLLLIYIK 614 PA +++LLIY++ Sbjct: 610 PADISVLLIYLE 621 >gi|196041933|ref|ZP_03109220.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus NVH0597-99] gi|196027188|gb|EDX65808.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus NVH0597-99] Length = 629 Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust. Identities = 284/622 (45%), Positives = 393/622 (63%), Gaps = 13/622 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEDGECKGVITQSGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVILGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G ++G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEVGHEIGLITEERYERFTNKKLQIEQEKERLSSIIIK 486 Query: 485 S--------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 +N+ + + +DG A + L P+ + +++ + P + S V E++ Sbjct: 487 PRPEVQELIRNIGGSEL---KDGI--RASDLLRRPEMTYEHIHLLVPSEVELSDEVKEQV 541 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS Sbjct: 542 EIQIKYEGYIEKSLQQVERMKKMENKKIPVDIDYDAISSLASEARQKLKDVRPLSMGQAS 601 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+ PA +++LL+YI++ + Sbjct: 602 RISGVNPADISILLVYIEQGKI 623 >gi|153002872|ref|YP_001368553.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shewanella baltica OS185] gi|166200612|sp|A6WUK1|MNMG_SHEB8 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|151367490|gb|ABS10490.1| glucose inhibited division protein A [Shewanella baltica OS185] Length = 629 Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust. Identities = 293/615 (47%), Positives = 383/615 (62%), Gaps = 5/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA++G+ T L+TH T+G MSCNPAIGG+GKGHLV+EIDAL Sbjct: 7 FDVIVVGGGHAGTEAALAAARMGSKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D AGIQFR LN KGPAVR R QADR LYR +Q + +Q NL + Q V Sbjct: 67 GGAMAIATDYAGIQFRTLNSSKGPAVRATRAQADRALYRQKIQNILQNQPNLRIFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + +V Q VVLTTGTFL G IHIG GR GD P+ +L N Sbjct: 127 DLIVENHQVVGVVTQMGLAFESPAVVLTTGTFLSGKIHIGLENYSGGRAGDPPAIALANR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D TI + + +Q D L SFM D + +QI C IT Sbjct: 187 LRELPIRVGRLKTGTPPRIDANTIDFSQMTEQKGDSPLPVMSFMGDVSHHPKQISCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH II + S +YSG I+ GPRYCPSIEDKI RF +++ HQIF+EPEGLNT+ Sbjct: 247 TNEKTHEIIRGGLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKSSHQIFIEPEGLNTNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q +R+I G+E I+RPGYAIEYDY +P++L +LETK I+GLF Sbjct: 307 IYPNGISTSLPFDVQLNLVRSIKGMENAEIMRPGYAIEYDYFDPRDLKNSLETKAINGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG+N++ + + C R ++Y+GV++DDL++ G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGMNASLQVQGKEAWCPRRDEAYLGVLVDDLSTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNF-LRSLLKSLVL 483 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F++ ++ L+ L V Sbjct: 427 RMFTSRAEYRLLLREDNADIRLTAKGRELGLVDDARWAEFSEKLESIELELQRLRGQWVH 486 Query: 484 TSKNLSSTSISFKQDGKTRTAY--EFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 + L +R A E L P+ L I E++QI+ Sbjct: 487 PNSPLIHALNPHLNTPISREASFEELLRRPEMDYSKLMQIEGFGPGLEDPQAAEQVQIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y+ Y RQ E + E +P DY +P LSNE+ KL+ KP + QAS+I G Sbjct: 547 KYSGYIQRQQEEINKAVRNENTGLPLTLDYKEVPGLSNEVIAKLNNHKPETIGQASRISG 606 Query: 601 MTPAALNLLLIYIKK 615 +TPAA+++LL+++KK Sbjct: 607 ITPAAISILLVHLKK 621 >gi|311032249|ref|ZP_07710339.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus sp. m3-13] Length = 629 Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust. Identities = 276/618 (44%), Positives = 397/618 (64%), Gaps = 5/618 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAG EA AA+ GA T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGVEAGLAAARQGAKTLMVTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ LY+ M++ I ++EN+ ++QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFLYQHEMKKTIENEENITLLQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ Q ++ TVV+TTGTFLRG I +G+L+ +G PS +L Sbjct: 127 EKLIVEDGVCKGVITQTGAIYESKTVVITTGTFLRGKIILGELQYLSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ +I + KTE Q D+ FS+ T + Q+ C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSASIDYSKTEIQPGDDVPRAFSYETTEYITDQLPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETH++I +N+ S +YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSAETHQLIDDNLHRSPMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q + + TIPGLE V ++R GYAIEYD I P +L+PTLETK+I L+ Sbjct: 307 VYVQGLSTSLPEDVQRKILSTIPGLENVRMMRAGYAIEYDAIVPTQLWPTLETKRIQNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QG++AGIN+ R++ + + SR+D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGIMAGINAGRRALGEEDLILSRSDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT IG K+G I R +F + QE + L+S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEIGHKIGLISPERFAKFEEKKQEIEAEKERLQSIII- 485 Query: 485 SKNLSSTSISFKQDGKTRT----AYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 N+ +I + G A + L P+ + ++ + P ++ S V E+++I+ Sbjct: 486 KPNVQVQTIIREAGGSELKDGIRAADLLKRPEMTYNHIHQMVPADKEISPDVAEQVEIQV 545 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y + + + +K E + IP++ DY + L+NE ++KL ++P ++ QAS+I G Sbjct: 546 KYEGYIQKSLQQVDRLKKMENKKIPENIDYDDIHGLANEARQKLKEVRPLSVAQASRISG 605 Query: 601 MTPAALNLLLIYIKKNTV 618 + PA +++LL+Y+++ + Sbjct: 606 VNPADVSILLVYLEQGRI 623 >gi|27469334|ref|NP_765971.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus epidermidis ATCC 12228] gi|57865943|ref|YP_187604.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus epidermidis RP62A] gi|282874717|ref|ZP_06283596.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus epidermidis SK135] gi|38257565|sp|Q8CMN6|MNMG_STAES RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|71152074|sp|Q5HS35|MNMG_STAEQ RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|27316884|gb|AAO06059.1|AE016752_92 glucose inhibited division protein A [Staphylococcus epidermidis ATCC 12228] gi|57636601|gb|AAW53389.1| glucose inhibited division protein A [Staphylococcus epidermidis RP62A] gi|281296433|gb|EFA88948.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus epidermidis SK135] gi|319399918|gb|EFV88164.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus epidermidis FRI909] gi|329724153|gb|EGG60671.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus epidermidis VCU144] Length = 625 Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust. Identities = 278/619 (44%), Positives = 395/619 (63%), Gaps = 3/619 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDV+VIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VREID Sbjct: 3 QEYDVVVIGAGHAGIEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVREID 62 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R + +++NLD++QG Sbjct: 63 ALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVLENEDNLDIMQGM 122 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E N + + + R V++TTGTFLRG I +G LK +G PS +L Sbjct: 123 VDELIIEDNEVKGVRTNIGTEYRSKAVIITTGTFLRGEIILGNLKYSSGPNHQLPSVTLA 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 ++ K FD R KTGTP R++ +TI + KTE Q D+ FSF T + Q+ C +T Sbjct: 183 DNLRKLGFDIVRFKTGTPPRVNARTIDYSKTEIQPGDDIGRAFSFETTEFILDQLPCWLT 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG NT+ Sbjct: 243 YTNGDTHQVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRNTN 302 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETK I L Sbjct: 303 EVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKAIKNL 362 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGT+GYEEAA QG++AGIN+A SR+D+YIGV+IDDL +KG EP Sbjct: 363 YTAGQINGTSGYEEAAGQGIMAGINAAGNVLGTGEKILSRSDAYIGVLIDDLVTKGTNEP 422 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G +LG I E R RF + Q+ L + + Sbjct: 423 YRLLTSRAEYRLLLRHDNADLRLTDMGYELGLISEERYARFNEKRQQIKDEIQRLTDVRI 482 Query: 484 TSKNLSSTSISFKQDGKTRT---AYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + I K + + A + L P+ + + + I ++ + V E+++I++ Sbjct: 483 KPNEHTQAIIEAKGGSRLKDGILAIDLLRRPEMNYETILEILEESHQLPEAVEEQVEIQT 542 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y + + + +++K E + IP+D DYS + +L++E +EKL+ +KP N+ QAS+I G Sbjct: 543 KYEGYINKSLQQVEKVKRMEAKKIPEDLDYSKVDSLASEAREKLAEVKPLNIAQASRISG 602 Query: 601 MTPAALNLLLIYIKKNTVK 619 + PA +++LL+Y+++ ++ Sbjct: 603 VNPADISILLVYLEQGKLQ 621 >gi|304412698|ref|ZP_07394301.1| glucose inhibited division protein A [Shewanella baltica OS183] gi|307305837|ref|ZP_07585583.1| glucose inhibited division protein A [Shewanella baltica BA175] gi|304348908|gb|EFM13323.1| glucose inhibited division protein A [Shewanella baltica OS183] gi|306911330|gb|EFN41756.1| glucose inhibited division protein A [Shewanella baltica BA175] Length = 629 Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust. Identities = 293/615 (47%), Positives = 383/615 (62%), Gaps = 5/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA++G+ T L+TH T+G MSCNPAIGG+GKGHLV+EIDAL Sbjct: 7 FDVIVVGGGHAGTEAALAAARMGSKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D AGIQFR LN KGPAVR R QADR LYR +Q + +Q NL + Q V Sbjct: 67 GGAMAIATDYAGIQFRTLNSSKGPAVRATRAQADRALYRQKIQNILQNQPNLRIFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + +V Q VVLTTGTFL G IHIG GR GD P+ +L N Sbjct: 127 DLIVENHQVVGVVTQMGLAFESPAVVLTTGTFLSGKIHIGLENYSGGRAGDPPAIALANR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D TI + + +Q D L SFM D + +QI C IT Sbjct: 187 LRELPIRVGRLKTGTPPRIDANTIDFSQMTEQKGDSPLPVMSFMGDVSHHPKQISCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH II + S +YSG I+ GPRYCPSIEDKI RF +++ HQIF+EPEGLNT+ Sbjct: 247 TNEKTHEIIRGGLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKSSHQIFIEPEGLNTNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q +R+I G+E I+RPGYAIEYDY +P++L +LETK I+GLF Sbjct: 307 IYPNGISTSLPFDVQLNLVRSIKGMENAEIMRPGYAIEYDYFDPRDLKNSLETKAINGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG+N++ + + C R ++Y+GV++DDL++ G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGMNASLQVQGKEAWCPRRDEAYLGVLVDDLSTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNF-LRSLLKSLVL 483 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F++ ++ L+ L V Sbjct: 427 RMFTSRAEYRLLLREDNADIRLTAKGRELGLVDDTRWAAFSEKLESIELELQRLRGQWVH 486 Query: 484 TSKNLSSTSISFKQDGKTRTAY--EFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 + L +R A E L P+ L I E++QI+ Sbjct: 487 PNSPLIHALNPHLNTPISREASFEELLRRPEMDYSKLMQIEGFGPGLEDPQAAEQVQIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y+ Y RQ E + E +P DY +P LSNE+ KL+ KP + QAS+I G Sbjct: 547 KYSGYIQRQQEEINKAVRNENTGLPLTLDYKEVPGLSNEVIAKLNNHKPETIGQASRISG 606 Query: 601 MTPAALNLLLIYIKK 615 +TPAA+++LL+++KK Sbjct: 607 ITPAAISILLVHLKK 621 >gi|253987528|ref|YP_003038884.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253778978|emb|CAQ82138.1| trna uridine 5-carboxymethylaminomethyl modification enzyme gid (glucose-inhibited division protein a) [Photorhabdus asymbiotica] Length = 629 Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust. Identities = 288/618 (46%), Positives = 395/618 (63%), Gaps = 9/618 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA Sbjct: 6 QFDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLM + D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 66 LGGLMAKATDQAGIQFRTLNASKGPAVRATRAQADRVLYRQAIRTALENQPNLMIFQQPV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E +++ V + R VVLT GTFL G IHIG GR GD P+ SL Sbjct: 126 EDLIVENDMVIGAVTRMGLKFRAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPAISLSQ 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 + RLKTGTP R+D +TI + + +Q D FSF+ + + +Q+ C IT Sbjct: 186 RLRELPLRVNRLKTGTPPRIDARTIDFSQLTQQLGDTPTPVFSFLGNAGQHPQQMPCYIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 246 HTNEKTHDVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q Q + ++ G+E I+RPGYAIEYD+ +P++L TLE+K I GL Sbjct: 306 EIYPNGISTSLPFDVQMQIVHSMKGMENARIVRPGYAIEYDFFDPRDLKQTLESKFIHGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+AR + + + R +YIGV++DDL + G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGLNAARYATEEEGWFPRRDQAYIGVLVDDLCTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT G KLG + + R + + + ++ R L+++ + Sbjct: 426 YRMFTSRAEYRLMLREDNADLRLTEKGRKLGLVDDSRWEHYCRKVEMIEQERQRLRNIWI 485 Query: 484 --TSKNLSSTSISFKQD-GKTRTAYEFLSYPDFSIQNLFSI---CPDARKFSSLVIERLQ 537 S NL + K K + L P+ + + L S+ P ++ + ++++ Sbjct: 486 HPHSNNLIDINDILKTPLSKEANGEDLLRRPEMNYELLTSLPLFSPGLKEPQT--ADQVE 543 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ Y Y RQ E ++ E +P D DY + LSNE+ KL+ KP ++ QAS+ Sbjct: 544 IQVKYEGYIARQQEEIEKQLRNENTSLPIDLDYCQISGLSNEVVAKLNDHKPSSIGQASR 603 Query: 598 IEGMTPAALNLLLIYIKK 615 I G+TPAA+++LL+++KK Sbjct: 604 ISGITPAAISILLVWLKK 621 >gi|167626210|ref|YP_001676504.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shewanella halifaxensis HAW-EB4] gi|189039357|sp|B0TQG5|MNMG_SHEHH RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|167356232|gb|ABZ78845.1| glucose inhibited division protein A [Shewanella halifaxensis HAW-EB4] Length = 629 Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust. Identities = 294/620 (47%), Positives = 380/620 (61%), Gaps = 15/620 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++G+ T L+TH T+G MSCNPAIGG+GKGHLV+EIDAL Sbjct: 7 FDVIVVGGGHAGTEAALASARMGSKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D AGIQFR LN KGPAVR R QADR LYR +Q + Q NL + Q V Sbjct: 67 GGAMAVATDFAGIQFRTLNSSKGPAVRATRAQADRALYRHKIQEILQHQTNLRIFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E N + +V Q VVLT GTFL G IHIG GR GD PS +L + Sbjct: 127 DLVVENNKVIGVVTQMGLAFEAPAVVLTAGTFLGGKIHIGLENYSGGRAGDPPSIALAHR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D TI + +Q D L SF+ D + Q+ C IT Sbjct: 187 LRELPIRVGRLKTGTPPRIDANTIDFSLMTEQKGDNPLPVMSFIGDVNDHPEQVSCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II + S +YSG I+ GPRYCPSIEDKI RF ++ HQIF+EPEGLNT Sbjct: 247 TNERTHDIIRGGLDRSPMYSGIIEGIGPRYCPSIEDKINRFADKTSHQIFIEPEGLNTTE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q +R+I G+E I+RPGYAIEYDY +P++L +LETK ISGLF Sbjct: 307 IYPNGISTSLPFDVQLNLVRSIKGMENAEIMRPGYAIEYDYFDPRDLKNSLETKAISGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG+N++ + + R +Y+GV++DDL++ G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGMNASLQVQGKEAWAPRRDQAYLGVLVDDLSTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNF-LRSLLKSLVL 483 RMFTSRAEYR+ LR DNAD RLT G +LG + ++R F++ ++ L+ L + Sbjct: 427 RMFTSRAEYRLLLREDNADLRLTEKGRELGLVDDKRWALFSEKMESIETELQRLRGQWIH 486 Query: 484 TSKNLSSTSISFKQDGKTRTAY--EFLSYPDFSIQNLFSI------CPDARKFSSLVIER 535 + L TR A + L P+ L SI D R E+ Sbjct: 487 PNSPLVEALNPNLNTPITREATFEDLLRRPEMDYPKLMSIDGFGPGLEDQR-----AAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 +QI+ Y+ Y RQ E + E L+P D DY +P LSNE+ K++ KP + QA Sbjct: 542 VQIQVKYSGYIQRQQGEIDKAIRHETTLLPLDLDYQEVPGLSNEVIAKMNEHKPETIGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I GMTPAA+++LL+++KK Sbjct: 602 SRISGMTPAAISILLVHLKK 621 >gi|163859298|ref|YP_001633596.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bordetella petrii DSM 12804] gi|205831490|sp|A9IJ48|MNMG_BORPD RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|163263026|emb|CAP45329.1| glucose-inhibited division protein A [Bordetella petrii] Length = 639 Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust. Identities = 296/625 (47%), Positives = 396/625 (63%), Gaps = 13/625 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R +DVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLV+E+D Sbjct: 5 REFDVIVVGGGHAGTEAALAAARIGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q L + Q Sbjct: 65 ALGGAMALATDEAGIQFRILNGSKGPAVRATRAQADRVLYRKAIRSRLENQPGLWIFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + + V Q R TVVLT GTFL G+IH+G GR GD P+ SL Sbjct: 125 VDDLMVEGDRVVGAVTQIGLKFRGRTVVLTAGTFLNGLIHVGLQNYSGGRAGDPPATSLG 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQIECG 241 + GRLKTGTP R+DG+TI + E+Q D +P FSF+ + + RQ+ C Sbjct: 185 QRLKELQLPQGRLKTGTPPRIDGRTIDYSVLEEQPGDLDPVPVFSFLGNAAMHPRQLPCW 244 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT TN TH II + S +YSG I+ GPRYCPSIEDKI RF ++ HQ+FLEPEGL+ Sbjct: 245 ITHTNARTHDIIRGGLDRSPMYSGVIEGVGPRYCPSIEDKIHRFADKASHQVFLEPEGLD 304 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T VYPNG+ST+LP ++Q I ++PGLE +I+RPGYAIEYDY +P+ L TLETK I Sbjct: 305 THEVYPNGVSTSLPFDVQWDLIHSLPGLENAHILRPGYAIEYDYFDPRALKSTLETKAIG 364 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GL+ AGQINGTTGYEEAAAQGL+AG N+A ++ D R ++Y+GV++DDL ++GV Sbjct: 365 GLYFAGQINGTTGYEEAAAQGLLAGANAALQALDRDTWTPRRDEAYLGVLVDDLVTRGVT 424 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+SLR DNAD RLT IG KLG + + R F++ LKS Sbjct: 425 EPYRMFTSRAEYRLSLREDNADLRLTEIGRKLGLVDDARWDAFSRKRDAVAAEVERLKST 484 Query: 482 VLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS--------ICPDARKFSS 530 + +N ++ + K + + + L P S L + Sbjct: 485 WVNPRNFPAETAEPLLGKAIEREYSLSDLLKRPAVSYAALMRARNADGSLLAGPGVTDDD 544 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 ++ E+++I+ YA Y RQ E ++ E++ IP D DY ++ +LS E+++KL +P Sbjct: 545 ILAEQVEIQVKYAGYIARQQDEVQKHLAHEQQRIPADIDYDAVSSLSFEVRQKLKTHRPE 604 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 + QA++I G+TPAA++LLLI++K+ Sbjct: 605 TIGQAARISGVTPAAISLLLIHLKR 629 >gi|52145291|ref|YP_086748.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus E33L] gi|196045512|ref|ZP_03112743.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus 03BB108] gi|229094594|ref|ZP_04225661.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus Rock3-42] gi|81824093|sp|Q630B9|MNMG_BACCZ RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|51978760|gb|AAU20310.1| glucose-inhibited division protein A [Bacillus cereus E33L] gi|196023719|gb|EDX62395.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus 03BB108] gi|228688841|gb|EEL42672.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus Rock3-42] Length = 629 Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust. Identities = 285/622 (45%), Positives = 393/622 (63%), Gaps = 13/622 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEDGECKGVITQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVILGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT IG ++G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEIGREIGLITEERYERFTNKKLQIEQEKERLSSIIIK 486 Query: 485 S--------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 +N+ + + +DG A + L P+ + +++ + P + S V E++ Sbjct: 487 PRPEVQELIRNIGGSEL---KDGI--RASDLLRRPEMTYEHIHLLVPSEVELSDEVKEQV 541 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS Sbjct: 542 EIQIKYEGYIEKSLQQVERMKKMENKKIPVDIDYDAISSLASEARQKLKDVRPLSMGQAS 601 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+ PA +++LL+YI++ + Sbjct: 602 RISGVNPADISILLVYIEQGKI 623 >gi|330812746|ref|YP_004357208.1| glucose inhibited division protein A [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380854|gb|AEA72204.1| putative glucose inhibited division protein A [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 632 Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust. Identities = 291/616 (47%), Positives = 388/616 (62%), Gaps = 7/616 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++GA T L+TH T+G+MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIVIGGGHAGTEAALASARMGAKTLLLTHNVETLGAMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAVREILENQPNLWIFQQAAD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q +VVLTTGTFL G+IHIG GR GD PS +L + Sbjct: 127 DLIVEQDQVRGVVTQMGLRFFADSVVLTTGTFLGGLIHIGLQNFSGGRAGDPPSIALAHR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+DGK++ + +Q D + SFM +K + RQ+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGKSVDFSVMTEQPGDTPIPVMSFMGNKEQHPRQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYS--GDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 TN TH II N+ S +YS G+I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 247 TNARTHEIIAANLDRSPMYSAAGEIEGVGPRYCPSIEDKIHRFADKESHQVFIEPEGLTT 306 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNGIST+LP ++Q Q +++I G+E +I+RPGYAIEYDY +P++L +LETK I G Sbjct: 307 HELYPNGISTSLPFDVQLQIVQSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKAIGG 366 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEA AQGL+AG N+A + + C R ++YIGV++DDL + G E Sbjct: 367 LFFAGQINGTTGYEEAGAQGLLAGANAALLAKGKEAWCPRRDEAYIGVLVDDLITLGTQE 426 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT G +LG + + R F K + LKS Sbjct: 427 PYRMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCKKRESIELEEQRLKSTW 486 Query: 483 LTSKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + +I+ K Y LS P+ L + + V E+++I+ Sbjct: 487 VRPGTEQGDAIAAKFGTPLTHEYNLLNLLSRPEIDYAGLVEVTGQGAE-DPQVAEQVEIK 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + YA Y RQ E ++ E +P D DY+ + LS E++ KL +P L QAS+I Sbjct: 546 TKYAGYIDRQQDEIARLRASEDTKLPVDIDYTGISGLSKEIQSKLGATRPETLGQASRIP 605 Query: 600 GMTPAALNLLLIYIKK 615 G+TPAA++LL+I++KK Sbjct: 606 GVTPAAISLLMIHLKK 621 >gi|237823657|pdb|2ZXH|A Chain A, Structure Of Aquifex Aeolicus Gida In The Form I Crystal gi|237823658|pdb|2ZXH|B Chain B, Structure Of Aquifex Aeolicus Gida In The Form I Crystal gi|237823659|pdb|2ZXI|A Chain A, Structure Of Aquifex Aeolicus Gida In The Form Ii Crystal gi|237823660|pdb|2ZXI|B Chain B, Structure Of Aquifex Aeolicus Gida In The Form Ii Crystal gi|237823661|pdb|2ZXI|C Chain C, Structure Of Aquifex Aeolicus Gida In The Form Ii Crystal gi|237823662|pdb|2ZXI|D Chain D, Structure Of Aquifex Aeolicus Gida In The Form Ii Crystal Length = 637 Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust. Identities = 295/625 (47%), Positives = 392/625 (62%), Gaps = 30/625 (4%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DV+VIGGGHAG EAA AA++GA TA+ TIG MSCNPAIGG+ KG +VREIDA Sbjct: 27 EFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDA 86 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D GIQF++LN +KG AV+ PR QAD++ YR M++ +QENL + Q EV Sbjct: 87 LGGEMGKAIDQTGIQFKMLNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIKQEEV 146 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + N + + + VV+TTGTFL GVI+IG IP GR+G+ S L + Sbjct: 147 VDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTFLNGVIYIGDKMIPGGRLGEPRSEGLSD 206 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-------RQ 237 + +FDF R KTGTPARLD +TI + E D+ FSF T+ + + Q Sbjct: 207 FYRRFDFPLIRFKTGTPARLDKRTIDFSALEVAPGDDPPPKFSFWTEPVGSYWFPKGKEQ 266 Query: 238 IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 + C IT T +TH II +N+ +A+Y G IK GPRYCPSIEDKIV+F ++ HQIFLEP Sbjct: 267 VNCWITYTTPKTHEIIRKNLHRTALYGGLIKGIGPRYCPSIEDKIVKFPDKERHQIFLEP 326 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EGL+T +YPNG+ST+LPEE+Q + R+IPGLE V +IRP YAIEYD + P EL+PTLET Sbjct: 327 EGLDTIEIYPNGLSTSLPEEVQWEMYRSIPGLENVVLIRPAYAIEYDVVPPTELYPTLET 386 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 KKI GLF AG NGTTGYEEAA QG+VAGIN+A ++ + I R +SYIGVMIDDLT+ Sbjct: 387 KKIRGLFHAGNFNGTTGYEEAAGQGIVAGINAALRAFGKEPIYLRRDESYIGVMIDDLTT 446 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL 477 KGV EPYR+FTSR+EYR+ +R DNA RL +G +LG + E ++Y ++ L Sbjct: 447 KGVTEPYRLFTSRSEYRLYIRQDNAILRLAKLGRELGLLSE----------EQYKLVKEL 496 Query: 478 LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDAR-KFS------S 530 + + + S +S G TR SY ++ + D + KF Sbjct: 497 EREIEKWKEFYKSERVSVAVGGDTR------SYSVATLMTMNYTLDDVKEKFGYEVPQHP 550 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 V E ++I+ Y Y R+ +++K E IP D DY +P L+ E +EKL KP Sbjct: 551 YVKEEVEIQLKYEPYIERERKLNEKLKKLEDTKIPPDIDYDKIPGLTKEAREKLKKFKPI 610 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 + QAS+I+G+TPAA+ LL+Y+ K Sbjct: 611 TVGQASRIDGITPAAITALLVYLGK 635 >gi|170699462|ref|ZP_02890505.1| glucose inhibited division protein A [Burkholderia ambifaria IOP40-10] gi|170135611|gb|EDT03896.1| glucose inhibited division protein A [Burkholderia ambifaria IOP40-10] Length = 656 Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust. Identities = 288/625 (46%), Positives = 388/625 (62%), Gaps = 15/625 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D +GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 67 GGAMAAATDESGIQFRILNSSKGPAVRATRAQADRILYKAAIRHRLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 127 DLMVEGDRVVGAVTQIGIRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQIECGIT 243 + GRLKTGTP R+DG++I + K ++Q D IP FSF+ + +Q+ C +T Sbjct: 187 LKELKLPQGRLKTGTPPRIDGRSIDFSKLDEQPGDLDPIPVFSFLGRAEQHPQQLPCWVT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPEGL T+ Sbjct: 247 HTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPEGLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP ++Q + + ++ GLE +I+RPGYAIEYDY +P+ L +LETK I+GL Sbjct: 307 EFYPNGISTSLPFDVQLELVHSMRGLENAHILRPGYAIEYDYFDPRALKASLETKAINGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+ R + D C R +Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGLNAGRYVQEKDAWCPRRDQAYLGVLVDDLVTRGVAEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F++ + LKS + Sbjct: 427 YRMFTSRAEYRLSLREDNADMRLTEIGRELGLVDDARWDAFSRKRDAVSRETERLKSTWV 486 Query: 484 TSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----CPDARKFSS------ 530 T K L +T++ K + E L P S + + C A + Sbjct: 487 TPKTLPPEEATALLGKAIDHEYSLAELLRRPGISYDGVCGLKGGECGPAEPLADDPVLLE 546 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 + E+++I Y Y RQ E + E +P DY + LS E+ +KL+ +P Sbjct: 547 QIKEQVEIGIKYQGYIERQASEIERNDANENTRLPDGIDYREVRGLSFEVSQKLNEFRPE 606 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 + QAS+I G+TPAA++LL++++K+ Sbjct: 607 TIGQASRISGVTPAAISLLMVHLKR 631 >gi|300314067|ref|YP_003778159.1| glucose inhibited division GidA protein [Herbaspirillum seropedicae SmR1] gi|300076852|gb|ADJ66251.1| glucose inhibited division GidA protein [Herbaspirillum seropedicae SmR1] Length = 642 Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust. Identities = 289/626 (46%), Positives = 394/626 (62%), Gaps = 12/626 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNP+IGG+GKGHLV+E+DA+ Sbjct: 7 FDVIVVGGGHAGTEAALAAARMGQKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAM 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D AGIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 67 GGAMAIATDEAGIQFRILNSSKGPAVRATRAQADRILYKAAIRSRLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q VVLT GTFL G IH+G GR GD P+ SL Sbjct: 127 DLMLEGDRVVGAVTQAGIRFAGRAVVLTAGTFLDGKIHVGLNNYSGGRAGDPPAVSLSAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQIECGIT 243 + GRLKTGTP R+DG++I E+Q D +P FS M + + RQ+ C IT Sbjct: 187 LKELKLPQGRLKTGTPPRIDGRSINLAILEEQPGDLDPVPVFSVMGNAAMHPRQMPCWIT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQI+LEPEGL T Sbjct: 247 HTNSRTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIYLEPEGLTTH 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP ++Q + +R++ G+E +I+RPGYAIEYDY +P+ L +LET+++ GL Sbjct: 307 EFYPNGISTSLPFDVQLELVRSMKGMENAHILRPGYAIEYDYYDPRGLKSSLETRQVQGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQG++AGIN+A ++ + R ++Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGMLAGINAALQTQGREAWTPRRDEAYLGVLVDDLVTQGVQEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLT IG +LGC+G+ + + F + + + LKS + Sbjct: 427 YRMFTSRAEYRLSLREDNADLRLTEIGRELGCVGDAQWEAFDRKREAVSREMERLKSTWV 486 Query: 484 TSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-------SSLVI 533 + L++ + K + + L P+ S +L + + V Sbjct: 487 NPRILAAAEAERVLGKAIEREYNLLDLLRRPNVSYDSLMGLTGTEGQALAGPGIEDGPVR 546 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I+ YA Y RQ E E +P D DY + ALS E+++KL+ +P L Sbjct: 547 EQVEIQVKYAGYIARQADEISRQDHNENLKLPADLDYMDVKALSIEVRQKLNKHRPETLG 606 Query: 594 QASKIEGMTPAALNLLLIYIKKNTVK 619 QAS+I G+TPAAL+LLL+++KK +K Sbjct: 607 QASRISGVTPAALSLLLVHLKKGGLK 632 >gi|262392793|ref|YP_003284647.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio sp. Ex25] gi|262336387|gb|ACY50182.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio sp. Ex25] Length = 631 Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust. Identities = 285/625 (45%), Positives = 388/625 (62%), Gaps = 13/625 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA +A+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHENFDVIVVGGGHAGTEAALASARTGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAEAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRNALENAPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E++ +V Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQSVDDLIVEQDRAVGVVTQMGLRFHAKAVVLTVGTFLGGKIHIGMESSSGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D +T+ + E Q D FSFM + + RQI Sbjct: 182 ALADRLRELPFRVDRLKTGTPPRIDARTVDFSVLEAQHGDNPTPVFSFMGKREQHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CFITHTNEQTHDVIRSNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTHELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 IHGLFFAGQINGTTGYEEAAAQGLMAGLNASLYSQDKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG I R RF + + R LK Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLIDNVRWARFNEKLNNMETERQRLK 481 Query: 480 SLVLTSKN--------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL 531 S + K+ L T ++ + G+ ++Y + F+ + ++ + Sbjct: 482 STWMNPKSEGVDELNKLLKTPMAREASGEDLLRRPEITYSQLTQLEAFAPALEDQQAA-- 539 Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 E+++I+ Y Y RQ E ++ E +P D DY + LSNE+ KLS KP + Sbjct: 540 --EQVEIQVKYDGYIKRQQEEIEKSLRHENTKLPADLDYRDVKGLSNEVVAKLSEAKPES 597 Query: 592 LLQASKIEGMTPAALNLLLIYIKKN 616 + AS+I G+TPAA+++LL+++KK+ Sbjct: 598 IGIASRISGITPAAISILLVHLKKH 622 >gi|119503566|ref|ZP_01625649.1| glucose-inhibited division protein A [marine gamma proteobacterium HTCC2080] gi|119460628|gb|EAW41720.1| glucose-inhibited division protein A [marine gamma proteobacterium HTCC2080] Length = 631 Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust. Identities = 282/618 (45%), Positives = 397/618 (64%), Gaps = 8/618 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDV+V+GGGHAG EAA AA+ GA T L+TH T+G MSCNPAIGG+GK HLVRE+D Sbjct: 6 QHYDVLVVGGGHAGTEAALAAARTGAKTLLLTHAIDTLGQMSCNPAIGGIGKSHLVREVD 65 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G+M R AD AGIQFRVLN +KGPAVR R Q+DR LYR ++ +L+Q NLD+ Q Sbjct: 66 ALGGVMARAADHAGIQFRVLNRRKGPAVRATRAQSDRVLYRNFIRTTLLNQPNLDIFQDS 125 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + + +S V ++ + TVVLT GTFLRG +H G + GR GD+ S SL Sbjct: 126 VEDLTLDGHRVSGAVTRNGLKFKGHTVVLTAGTFLRGRLHTGMSQHEGGRAGDAASISLA 185 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGI 242 + + GRLKTGTP R+D +T+ + ++Q+ DE S D+ + +Q+ C + Sbjct: 186 DRLRELCPRVGRLKTGTPPRVDARTVDFSALQEQWGDEPRPVMSLYGDRSDHPQQMCCWV 245 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II + + S ++ G I+ GPRYCPSIEDKI RF +++ HQIFLEPEGL T Sbjct: 246 TETNTQTHDIIRQGLDRSPLFGGVIEGNGPRYCPSIEDKIHRFADKDSHQIFLEPEGLTT 305 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNGIST+LP ++Q +R+I G++ +I RPGYAIEYDY +P++L +LET++I G Sbjct: 306 TELYPNGISTSLPFDVQLNLVRSIAGMQSAHITRPGYAIEYDYFDPRDLKHSLETREIEG 365 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AG+N+A+K+ R ++YIGV++DDL + G E Sbjct: 366 LFFAGQINGTTGYEEAAAQGLLAGVNAAQKAADRPAWEPGRDEAYIGVLVDDLVTLGTQE 425 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFA--KYIQEYNFLRSLLKS 480 PYRMFTSRAEYR+ LR DNAD RLT G LG + + + F K E R L++ Sbjct: 426 PYRMFTSRAEYRLLLREDNADLRLTEHGRNLGLVTDEQWDTFTTRKATIEEELHR--LET 483 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 + + + ++ K Y + L P+ ++ + A + +++ Sbjct: 484 TYIQPGSTQAEQLTPKIKKPLVREYSLADLLRRPELEYHDVAGLSGTACVTTEHAADQVA 543 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 + YA Y RQ + ++ +E +IP D D++++ LSNE+++KL+ +P + +A + Sbjct: 544 TQIKYAGYIERQAEDIAKLHRQESAVIPDDIDFANVRGLSNEIQQKLTAARPSTIARAGR 603 Query: 598 IEGMTPAALNLLLIYIKK 615 I G+TPAAL+LLL+YIK+ Sbjct: 604 ISGVTPAALSLLLVYIKR 621 >gi|125808684|ref|XP_001360830.1| GA18299 [Drosophila pseudoobscura pseudoobscura] gi|54636002|gb|EAL25405.1| GA18299 [Drosophila pseudoobscura pseudoobscura] Length = 659 Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust. Identities = 284/633 (44%), Positives = 415/633 (65%), Gaps = 26/633 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+VIGGGHAG EA+A AA++GA T L+THK TIG MSCNP+ GG+GKGHL+RE+DAL Sbjct: 30 YDVVVIGGGHAGTEASAAAARMGARTLLLTHKLETIGEMSCNPSFGGIGKGHLMREVDAL 89 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DG+ GR D +G+ ++VLN ++GPAV GPR Q DR+LY+ A+Q+E+ S +NL++ V Sbjct: 90 DGVCGRCCDVSGVHYKVLNKRRGPAVWGPRAQIDRQLYKKAVQKELHSTQNLEIRAAAVD 149 Query: 126 GF-----NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 + + +++ + ++R +VVLTTGTFLR I+IG PAGRMGD+P+ Sbjct: 150 NILIEDEQHQHRRCTGVLLANGEVVRSRSVVLTTGTFLRAHINIGLEVRPAGRMGDAPAK 209 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI---TNRQ 237 +L + + F GRLKTGTP R+ ++ + + E+ D+ PFSF+ + Q Sbjct: 210 ALGEAIDRLGFRMGRLKTGTPPRIAKSSVDFSQLERHEGDDPPTPFSFLNSHVWLPAKEQ 269 Query: 238 IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 + C +T T + I+ N+ + + +I GPRYCPSIE KI+RFG R HQ++LEP Sbjct: 270 LPCHLTYTTPLVNDIVRNNLHVNRHVTEEIT--GPRYCPSIESKILRFGARV-HQVWLEP 326 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EGL++ +VYP GIS LP E Q + + I GLE +++PGY +EYD+I+P+ELFPTLET Sbjct: 327 EGLDSPLVYPQGISCTLPHEQQVELVHAIKGLEHAEVVQPGYGVEYDFIDPRELFPTLET 386 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDC--ICFSRTDSYIGVMIDDL 415 K++ GLF AGQINGTTGYEEAAAQG+VAG N+A K+ D + SRT+ YIGV++DDL Sbjct: 387 KRVPGLFFAGQINGTTGYEEAAAQGIVAGANAAGKTRHADGRQLTISRTEGYIGVLVDDL 446 Query: 416 TSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLR 475 TS G EPYRMFTSRAE+R+SLRPDNAD RLT G + G + E RF + Q L+ Sbjct: 447 TSLGTNEPYRMFTSRAEFRLSLRPDNADMRLTNKGYEYGLVSE---NRFRHFKQAEERLQ 503 Query: 476 SLLKSLVLTSKNLS----STSISFKQDGKTRTAYEFLSYP--DFSIQNLFSICPDARKF- 528 S +++L K+ + S + + +TA++ L+ P + ++ L ++ P + Sbjct: 504 SGMEALRGLRKHSNYWRQSLDLPTSKASVEKTAFDMLAIPADNITVDKLINLFPTELSWL 563 Query: 529 --SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDY-SSLPALSNELKEKLS 585 + + ERL+IE+ Y+ + Q + ++++ EE+ IP D DY S + +LSNE ++KLS Sbjct: 564 RDDNNLAERLKIEALYSFFVEEQQRDVEDVRREERLAIPADIDYFSKVLSLSNEERQKLS 623 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYIKKNTV 618 +++P + AS+I+G+TP+ + ++ Y+KK V Sbjct: 624 LIQPQTIAAASRIQGVTPSTIVRIMKYVKKADV 656 >gi|251811360|ref|ZP_04825833.1| glucose inhibited division protein A [Staphylococcus epidermidis BCM-HMP0060] gi|251805109|gb|EES57766.1| glucose inhibited division protein A [Staphylococcus epidermidis BCM-HMP0060] Length = 630 Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust. Identities = 278/619 (44%), Positives = 395/619 (63%), Gaps = 3/619 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDV+VIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VREID Sbjct: 8 QEYDVVVIGAGHAGIEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVREID 67 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R + +++NLD++QG Sbjct: 68 ALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVLENEDNLDIMQGM 127 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E N + + + R V++TTGTFLRG I +G LK +G PS +L Sbjct: 128 VDELIIEDNEVKGVRTNIGTEYRSKAVIITTGTFLRGEIILGNLKYSSGPNHQLPSVTLA 187 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 ++ K FD R KTGTP R++ +TI + KTE Q D+ FSF T + Q+ C +T Sbjct: 188 DNLRKLGFDIVRFKTGTPPRVNARTIDYSKTEIQPGDDIGRAFSFETTEFILDQLPCWLT 247 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG NT+ Sbjct: 248 YTNGDTHQVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRNTN 307 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETK I L Sbjct: 308 EVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKAIKNL 367 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGT+GYEEAA QG++AGIN+A SR+D+YIGV+IDDL +KG EP Sbjct: 368 YTAGQINGTSGYEEAAGQGIMAGINAAGNVLGTGEKILSRSDAYIGVLIDDLVTKGTNEP 427 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G +LG I E R RF + Q+ L + + Sbjct: 428 YRLLTSRAEYRLLLRHDNADLRLTDMGYELGLISEERYARFNEKRQQIKDEIQRLTDVRI 487 Query: 484 TSKNLSSTSISFKQDGKTRT---AYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + I K + + A + L P+ + + + I ++ + V E+++I++ Sbjct: 488 KPNEHTQAIIEAKGGSRLKDGILAIDLLRRPEMNYETILEILEESHQLPEAVEEQVEIQT 547 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y + + + +++K E + IP+D DYS + +L++E +EKL+ +KP N+ QAS+I G Sbjct: 548 KYEGYINKSLQQVEKVKRMEAKKIPEDLDYSKVESLASEAREKLAEVKPLNIAQASRISG 607 Query: 601 MTPAALNLLLIYIKKNTVK 619 + PA +++LL+Y+++ ++ Sbjct: 608 VNPADISILLVYLEQGKLQ 626 >gi|33591276|ref|NP_878920.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bordetella pertussis Tohama I] gi|81170529|sp|Q7W0T0|MNMG_BORPE RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|33570918|emb|CAE40381.1| glucose inhibited division protein A [Bordetella pertussis Tohama I] gi|332380678|gb|AEE65525.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bordetella pertussis CS] Length = 639 Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust. Identities = 297/627 (47%), Positives = 406/627 (64%), Gaps = 17/627 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R +DVIV+GGGHAG EAA AA+ GA T L+TH T+G MSCNP+IGG+GKGHLV+E+D Sbjct: 5 REFDVIVVGGGHAGTEAALAAARAGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D AGIQFR+LN KGPAVR R QADR LYR A++ ++ +Q NL + Q Sbjct: 65 ALGGAMAIATDEAGIQFRILNSSKGPAVRATRAQADRVLYRNAIRAQLENQPNLWLFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + + + V Q R TVVLT GTFL G+IH+G GR GD P+NSL Sbjct: 125 VDDLMVQGDQVVGAVTQIGLRFRARTVVLTAGTFLNGLIHVGLQNYSGGRAGDPPANSLG 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTD-KITNRQIECG 241 + GRLKTGTP R+DG++I + E+Q D +P FSF+ + RQ+ C Sbjct: 185 QRLKELQLPQGRLKTGTPPRIDGRSINYSVLEEQPGDLDPVPVFSFLGKASMHPRQLPCW 244 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT TN TH II + S +YSG I+ GPRYCPSIEDKI RF ++ HQ+FLEPEGLN Sbjct: 245 ITHTNARTHEIIRGGLDRSPMYSGVIEGVGPRYCPSIEDKIHRFADKASHQVFLEPEGLN 304 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T +YPNG+ST+LP ++Q++ I ++PGLE +I+RPGYAIEYDY +P+ L TLETK IS Sbjct: 305 THEIYPNGVSTSLPFDVQYELIHSLPGLENAHILRPGYAIEYDYFDPRALKSTLETKAIS 364 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQINGTTGYEEAAAQGL+AG N+A ++ + R ++Y+GV++DDL ++GV Sbjct: 365 GLFFAGQINGTTGYEEAAAQGLLAGANAALQAQGKEPWVPRRDEAYLGVLVDDLVTRGVT 424 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAK----YIQEYNFLRS- 476 EPYRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F++ QE L+S Sbjct: 425 EPYRMFTSRAEYRLSLREDNADLRLTEIGRRLGLVDDVRWDAFSRKRDAVAQEVERLKST 484 Query: 477 LLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-------- 528 + VL + ++ ++ K + + + L P+ S + L D + Sbjct: 485 WVNPRVLPAH--AAEALLGKAIEREYSLSDLLKRPNVSYEALMQARTDEGELLAGPGVLE 542 Query: 529 SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 ++ E+++ + YA Y RQ E ++ E++ IP D DY ++ +LS E+++KL + Sbjct: 543 DQVLAEQVETQVKYAGYIARQQDEVQKHLSHEQQPIPADIDYDAVTSLSFEVRQKLKTHR 602 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIKK 615 P + QA+++ G+TPAA++LLLI++K+ Sbjct: 603 PETIGQAARVSGVTPAAISLLLIHLKR 629 >gi|157377627|ref|YP_001476227.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shewanella sediminis HAW-EB3] gi|189039359|sp|A8G1X6|MNMG_SHESH RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|157320001|gb|ABV39099.1| glucose inhibited division protein A [Shewanella sediminis HAW-EB3] Length = 632 Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust. Identities = 298/620 (48%), Positives = 387/620 (62%), Gaps = 15/620 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G+ T L+TH T+G MSCNPAIGG+GKGHLV+EIDAL Sbjct: 7 FDVIVIGGGHAGTEAALAAARMGSKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D AGIQFR LN KGPAVR R QADR LYR +Q + +Q NL + Q V Sbjct: 67 GGAMAIATDYAGIQFRTLNSSKGPAVRATRAQADRALYRAKIQEILQNQPNLRLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E ++ +V Q VVLT GTFL G IHIG GR GD PS +L + Sbjct: 127 DLIVENGKVTGVVTQMGLAFEAPAVVLTAGTFLSGKIHIGMQNYSGGRAGDPPSIALADR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D TI +D +Q D L SF+ D + RQ+ C +T Sbjct: 187 LRELPIRIGRLKTGTPPRIDANTINFDLMTEQKGDTPLPVMSFIGDVSHHPRQVSCFVTH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II + S +YSG I+ GPRYCPSIEDKI RF +++ HQIF+EPEGLNT+ Sbjct: 247 TNERTHDIIRGGLDRSPMYSGIIEGVGPRYCPSIEDKINRFADKSSHQIFIEPEGLNTNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q +R+I G+E IIRPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 IYPNGISTSLPFDVQLNLVRSIKGMENAEIIRPGYAIEYDYFDPRDLKNSLETKSIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG+N++ + + C R ++Y+GV++DDL++ G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGMNASLQVQGKESWCPRRDEAYLGVLVDDLSTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQ----EYNFLRSLL-- 478 RMFTSRAEYR+ LR DNAD RLT G ++G + E R +F K + E LRS Sbjct: 427 RMFTSRAEYRLLLREDNADLRLTEKGHQIGLVDEDRWAKFNKKRESIELELQRLRSQWVH 486 Query: 479 -KSLVLTSKNLS-STSISFKQDGKTRTAYEFLSYPDF-SIQNLFSICPDARKFSSLVIER 535 S +L N +T IS + + + YP S++ D R E+ Sbjct: 487 PNSPLLEVLNPELNTPISREASFEDLLRRPEMDYPKLMSLEGFGPALEDQR-----AAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 +QI+ Y+ Y RQ E + E +P + DY +P LSNE+ KL+ KP + QA Sbjct: 542 VQIQVKYSGYIQRQQDEIDKAIKHETTGLPLELDYQEVPGLSNEVIAKLNDHKPETIGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I GMTPAA+++LL+++K+ Sbjct: 602 SRISGMTPAAISILLVHLKR 621 >gi|217975459|ref|YP_002360210.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shewanella baltica OS223] gi|254811519|sp|B8EDW1|MNMG_SHEB2 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|217500594|gb|ACK48787.1| glucose inhibited division protein A [Shewanella baltica OS223] Length = 629 Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust. Identities = 293/615 (47%), Positives = 383/615 (62%), Gaps = 5/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA++G+ T L+TH T+G MSCNPAIGG+GKGHLV+EIDAL Sbjct: 7 FDVIVVGGGHAGTEAALAAARMGSKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D AGIQFR LN KGPAVR R QADR LYR +Q + +Q NL + Q V Sbjct: 67 GGAMAIATDYAGIQFRTLNSSKGPAVRATRAQADRALYRQKIQNILQNQPNLRIFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + +V Q VVLTTGTFL G IHIG GR GD P+ +L N Sbjct: 127 DLIVENHQVVGVVTQMGLAFESPAVVLTTGTFLSGKIHIGLENYSGGRAGDPPAIALANR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D TI + + +Q D L SFM D + +QI C IT Sbjct: 187 LRELPIRVGRLKTGTPPRIDANTIDFSQMAEQKGDSPLPVMSFMGDVSHHPKQISCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH II + S +YSG I+ GPRYCPSIEDKI RF +++ HQIF+EPEGLNT+ Sbjct: 247 TNEKTHEIIRGGLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKSSHQIFIEPEGLNTNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q +R+I G+E I+RPGYAIEYDY +P++L +LETK I+GLF Sbjct: 307 IYPNGISTSLPFDVQLNLVRSIKGMENAEIMRPGYAIEYDYFDPRDLKNSLETKAINGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG+N++ + + C R ++Y+GV++DDL++ G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGMNASLQVQGKEAWCPRRDEAYLGVLVDDLSTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNF-LRSLLKSLVL 483 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F++ ++ L+ L V Sbjct: 427 RMFTSRAEYRLLLREDNADIRLTAKGRELGLVDDARWAAFSEKLESIELELQRLRGQWVH 486 Query: 484 TSKNLSSTSISFKQDGKTRTAY--EFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 + L +R A E L P+ L I E++QI+ Sbjct: 487 PNSPLIHALNPHLNTPISREASFEELLRRPEMDYSKLMQIEGFGPGLEDPQAAEQVQIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y+ Y RQ E + E +P DY +P LSNE+ KL+ KP + QAS+I G Sbjct: 547 KYSGYIQRQQEEINKAVRNENTGLPLTLDYKEVPGLSNEVIAKLNNHKPETIGQASRISG 606 Query: 601 MTPAALNLLLIYIKK 615 +TPAA+++LL+++KK Sbjct: 607 ITPAAISILLVHLKK 621 >gi|254000527|ref|YP_003052590.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Methylovorus sp. SIP3-4] gi|253987206|gb|ACT52063.1| glucose inhibited division protein A [Methylovorus sp. SIP3-4] Length = 631 Score = 543 bits (1400), Expect = e-152, Method: Compositional matrix adjust. Identities = 285/615 (46%), Positives = 395/615 (64%), Gaps = 6/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++G T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALASARMGQKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q V Sbjct: 67 GGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRVLYKAAIRRRLENQANLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + + +V Q VVLT GTFL G++H+G AGR GD P+ SL Sbjct: 127 DIILDGTRAAGVVTQLGLRFESKAVVLTAGTFLAGLVHVGLANYQAGRAGDPPAVSLAAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+DG+TI + +Q D+ + FSF+ + + Q+ C IT Sbjct: 187 LREIGLPAGRLKTGTPPRIDGRTIDYSVMLEQPGDDPVPVFSFLGNASQHPAQLPCWITS 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II + S +Y+G I+ GPRYCPS+EDKI RF ++ HQIFLEPEGL T+ Sbjct: 247 TNERTHDIIRSGLDRSPMYTGVIEGVGPRYCPSVEDKIHRFADKESHQIFLEPEGLTTNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP +IQ+Q +R+I GLE +I+RPGYAIEYDY +P+ L +LETK + GLF Sbjct: 307 IYPNGISTSLPFDIQYQLVRSIKGLENAHILRPGYAIEYDYYDPRGLKNSLETKAVQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG N+A + + D C +R +Y+GV++DDL ++GV EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGANAALYAQEKDSWCPARDQAYLGVLVDDLITRGVSEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAK----YIQEYNFLRSLLKS 480 RMFTSRAEYR+ LR DNAD RLT G ++G + + R + F++ ++E LR Sbjct: 427 RMFTSRAEYRLMLREDNADMRLTEAGRRIGLVDDARWEAFSRKQEAILREQERLRKTYVH 486 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 S ++ + KQ + + +E L P+ S + L ++ + V ++++I + Sbjct: 487 PGQVSADVMEKVLG-KQIDREYSMFELLRRPEVSYEALLTLAEGDGEQDEQVRQQIEIAA 545 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E + + +E +P D DY + LS E ++KL+ KP + QAS+I G Sbjct: 546 KYQGYIDRQADEIERQRGQEDTRLPADMDYREVHGLSIEAQQKLNAQKPETVGQASRISG 605 Query: 601 MTPAALNLLLIYIKK 615 +TPAA++LLL+++K+ Sbjct: 606 ITPAAISLLLVHLKR 620 >gi|324329434|gb|ADY24694.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus thuringiensis serovar finitimus YBT-020] Length = 629 Score = 543 bits (1400), Expect = e-152, Method: Compositional matrix adjust. Identities = 285/622 (45%), Positives = 393/622 (63%), Gaps = 13/622 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEDGECKGVITQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVILGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT IG ++G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEIGHEIGLIKEERYERFTNKKLQIEQEKERLSSIIIK 486 Query: 485 S--------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 +N+ + + +DG A + L P+ + +++ + P + S V E++ Sbjct: 487 PRPEVQELIRNIGGSEL---KDGI--RASDLLRRPEMTYEHIRLLVPSEVELSDEVTEQV 541 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS Sbjct: 542 EIQIKYEGYIEKSLQQVERMKKMESKKIPVDIDYDAISSLASEARQKLKDVRPLSVGQAS 601 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+ PA +++LL+YI++ + Sbjct: 602 RISGVNPADISILLVYIEQGKI 623 >gi|126176558|ref|YP_001052707.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shewanella baltica OS155] gi|166200611|sp|A3DAS5|MNMG_SHEB5 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|125999763|gb|ABN63838.1| glucose inhibited division protein A [Shewanella baltica OS155] Length = 629 Score = 543 bits (1400), Expect = e-152, Method: Compositional matrix adjust. Identities = 293/615 (47%), Positives = 383/615 (62%), Gaps = 5/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA++G+ T L+TH T+G MSCNPAIGG+GKGHLV+EIDAL Sbjct: 7 FDVIVVGGGHAGTEAALAAARMGSKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D AGIQFR LN KGPAVR R QADR LYR +Q + +Q NL + Q V Sbjct: 67 GGAMAIATDYAGIQFRTLNSSKGPAVRATRAQADRALYRQKIQNILQNQPNLRIFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + +V Q VVLTTGTFL G IHIG GR GD P+ +L N Sbjct: 127 DLIVENHQVVGVVTQMGLAFESPAVVLTTGTFLSGKIHIGLENYSGGRAGDPPAIALANR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D TI + + +Q D L SFM D + +QI C IT Sbjct: 187 LRELPIRVGRLKTGTPPRIDANTIDFSQMTEQKGDSPLPVMSFMGDVSHHPKQISCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH II + S +YSG I+ GPRYCPSIEDKI RF +++ HQIF+EPEGLNT+ Sbjct: 247 TNEKTHEIIRGGLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKSSHQIFIEPEGLNTNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q +R+I G+E I+RPGYAIEYDY +P++L +LETK I+GLF Sbjct: 307 IYPNGISTSLPFDVQLNLVRSIKGMENAEIMRPGYAIEYDYFDPRDLKNSLETKAINGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG+N++ + + C R ++Y+GV++DDL++ G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGMNASLQVQGKEAWCPRRDEAYLGVLVDDLSTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNF-LRSLLKSLVL 483 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F++ ++ L+ L V Sbjct: 427 RMFTSRAEYRLLLREDNADIRLTAKGRELGLVDDARWAAFSEKLESIELELQRLRGQWVH 486 Query: 484 TSKNLSSTSISFKQDGKTRTAY--EFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 + L +R A E L P+ L I E++QI+ Sbjct: 487 PNSPLIHALNPHLNTPISREASFEELLRRPEMDYSKLMQIEGFGPGLEDPQAAEQVQIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y+ Y RQ E + E +P DY +P LSNE+ KL+ KP + QAS+I G Sbjct: 547 KYSGYIQRQQEEINKAVRNENTGLPLTLDYKEVPGLSNEVIAKLNNHKPETIGQASRISG 606 Query: 601 MTPAALNLLLIYIKK 615 +TPAA+++LL+++KK Sbjct: 607 ITPAAISILLVHLKK 621 >gi|15606146|ref|NP_213523.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Aquifex aeolicus VF5] gi|3913739|sp|O66962|MNMG_AQUAE RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|2983328|gb|AAC06917.1| glucose inhibited division protein A [Aquifex aeolicus VF5] Length = 617 Score = 543 bits (1400), Expect = e-152, Method: Compositional matrix adjust. Identities = 295/625 (47%), Positives = 392/625 (62%), Gaps = 30/625 (4%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DV+VIGGGHAG EAA AA++GA TA+ TIG MSCNPAIGG+ KG +VREIDA Sbjct: 7 EFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D GIQF++LN +KG AV+ PR QAD++ YR M++ +QENL + Q EV Sbjct: 67 LGGEMGKAIDQTGIQFKMLNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIKQEEV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + N + + + VV+TTGTFL GVI+IG IP GR+G+ S L + Sbjct: 127 VDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTFLNGVIYIGDKMIPGGRLGEPRSEGLSD 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-------RQ 237 + +FDF R KTGTPARLD +TI + E D+ FSF T+ + + Q Sbjct: 187 FYRRFDFPLIRFKTGTPARLDKRTIDFSALEVAPGDDPPPKFSFWTEPVGSYWFPKGKEQ 246 Query: 238 IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 + C IT T +TH II +N+ +A+Y G IK GPRYCPSIEDKIV+F ++ HQIFLEP Sbjct: 247 VNCWITYTTPKTHEIIRKNLHRTALYGGLIKGIGPRYCPSIEDKIVKFPDKERHQIFLEP 306 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EGL+T +YPNG+ST+LPEE+Q + R+IPGLE V +IRP YAIEYD + P EL+PTLET Sbjct: 307 EGLDTIEIYPNGLSTSLPEEVQWEMYRSIPGLENVVLIRPAYAIEYDVVPPTELYPTLET 366 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 KKI GLF AG NGTTGYEEAA QG+VAGIN+A ++ + I R +SYIGVMIDDLT+ Sbjct: 367 KKIRGLFHAGNFNGTTGYEEAAGQGIVAGINAALRAFGKEPIYLRRDESYIGVMIDDLTT 426 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL 477 KGV EPYR+FTSR+EYR+ +R DNA RL +G +LG + E ++Y ++ L Sbjct: 427 KGVTEPYRLFTSRSEYRLYIRQDNAILRLAKLGRELGLLSE----------EQYKLVKEL 476 Query: 478 LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDAR-KFS------S 530 + + + S +S G TR SY ++ + D + KF Sbjct: 477 EREIEKWKEFYKSERVSVAVGGDTR------SYSVATLMTMNYTLDDVKEKFGYEVPQHP 530 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 V E ++I+ Y Y R+ +++K E IP D DY +P L+ E +EKL KP Sbjct: 531 YVKEEVEIQLKYEPYIERERKLNEKLKKLEDTKIPPDIDYDKIPGLTKEAREKLKKFKPI 590 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 + QAS+I+G+TPAA+ LL+Y+ K Sbjct: 591 TVGQASRIDGITPAAITALLVYLGK 615 >gi|300118815|ref|ZP_07056535.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus SJ1] gi|298723783|gb|EFI64505.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus SJ1] Length = 629 Score = 543 bits (1400), Expect = e-152, Method: Compositional matrix adjust. Identities = 285/622 (45%), Positives = 393/622 (63%), Gaps = 13/622 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEDGECKGVITQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVILGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT IG ++G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEIGHEIGLITEDRYERFTNKKLQIEQEKERLSSIIIK 486 Query: 485 S--------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 +N+ + + +DG A + L P+ + +++ + P + S V E++ Sbjct: 487 PRPEVQELIRNIGGSEL---KDGI--RASDLLRRPEMTYEHIHLLVPSEVELSDEVKEQV 541 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS Sbjct: 542 EIQIKYEGYIEKSLQQVERMKKMENKKIPVDIDYDAISSLASEARQKLKDVRPLSMGQAS 601 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+ PA +++LL+YI++ + Sbjct: 602 RISGVNPADISILLVYIEQGKI 623 >gi|289547841|ref|YP_003472829.1| glucose inhibited division protein A [Thermocrinis albus DSM 14484] gi|289181458|gb|ADC88702.1| glucose inhibited division protein A [Thermocrinis albus DSM 14484] Length = 614 Score = 543 bits (1400), Expect = e-152, Method: Compositional matrix adjust. Identities = 294/631 (46%), Positives = 391/631 (61%), Gaps = 35/631 (5%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M+ +DV+VIGGGHAG EAA +A++GA TA+ TIG MSCNPAIGG+ KG +VR Sbjct: 1 MLVDEFDVVVIGGGHAGIEAALASARMGAKTAMFVLNADTIGQMSCNPAIGGVAKGIVVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G MG+ D GIQF++LN +KG AV PR QAD++ YR M+R QENL + Sbjct: 61 EIDALGGEMGKAIDTTGIQFKMLNTRKGKAVWSPRAQADKKRYREYMKRVCEQQENLYIK 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q EV E + + ++ + + VV+TTGTFL GVI+IG PAGR + S Sbjct: 121 QDEVVDIVVENDRVVAVRTRLGLEYKTKAVVVTTGTFLNGVIYIGDKTFPAGRAWEPSSK 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN----- 235 L + + F R KTGTPARLDG+TI + E D+ FSF T+ + + Sbjct: 181 DLSQFYKRHGFPLLRFKTGTPARLDGRTIDYSVLEPAPGDDPPPKFSFWTEPMGSYWFPP 240 Query: 236 --RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQI 293 Q+ C IT T +TH II +N+ +A+Y G IK GPRYCPSIEDK+V+F +++ HQ+ Sbjct: 241 GKEQVLCWITYTTPKTHEIIRKNLHRTALYGGLIKGIGPRYCPSIEDKVVKFADKDRHQV 300 Query: 294 FLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFP 353 FLEPEGL+T VYPNG+ST+LPEE+Q + R+IPGLEKV +IRP YAIEYD + P EL+P Sbjct: 301 FLEPEGLDTIEVYPNGLSTSLPEEVQWELYRSIPGLEKVELIRPAYAIEYDVVPPTELYP 360 Query: 354 TLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMID 413 TLETKKI GLF AG NGTTGYEEAA QG++AGIN+A ++ + I R +SYIG+M+D Sbjct: 361 TLETKKIRGLFHAGNFNGTTGYEEAAGQGILAGINAALRAMGKEPIYLRRDESYIGIMVD 420 Query: 414 DLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGE---RRQKRFAKYIQE 470 DLT+KGV EPYR+FTSR+EYR+ LR DNA RL IG LG + E R K + IQ Sbjct: 421 DLTTKGVTEPYRLFTSRSEYRLYLRQDNAILRLAHIGRNLGLLSEDQYRMVKELKEEIQR 480 Query: 471 Y-NFLRSLLKSLVLTSKNLSST-----SISFKQDGKTRTAYEFLSYPDFSIQNLFSICPD 524 + F +S + + S T + + + TR +E S+P Sbjct: 481 WIEFYKSARVVVAVGSDTRPYTPSQLLTSQYTLEDLTRWGFEIPSHP------------- 527 Query: 525 ARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKL 584 V E ++IE Y Y R+ +++K E +IP+D DY +P L+ E +EKL Sbjct: 528 ------YVREEVEIELKYEPYIEREKKLNEKLKKLEDTVIPEDIDYDKVPGLTTEAREKL 581 Query: 585 SILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 +P + QAS+I+G+TPAA+ LL Y+ K Sbjct: 582 KKFRPITVGQASRIDGITPAAITALLAYLGK 612 >gi|30265501|ref|NP_847878.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. Ames] gi|47531069|ref|YP_022418.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. 'Ames Ancestor'] gi|49188320|ref|YP_031573.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. Sterne] gi|49481136|ref|YP_039473.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus thuringiensis serovar konkukian str. 97-27] gi|65317464|ref|ZP_00390423.1| COG0445: NAD/FAD-utilizing enzyme apparently involved in cell division [Bacillus anthracis str. A2012] gi|118480510|ref|YP_897661.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus thuringiensis str. Al Hakam] gi|165873038|ref|ZP_02217659.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. A0488] gi|167635097|ref|ZP_02393414.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. A0442] gi|167641741|ref|ZP_02399984.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. A0193] gi|170689473|ref|ZP_02880663.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. A0465] gi|170707574|ref|ZP_02898027.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. A0389] gi|177655265|ref|ZP_02936819.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. A0174] gi|227818252|ref|YP_002818261.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. CDC 684] gi|228918095|ref|ZP_04081623.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228930489|ref|ZP_04093489.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228936763|ref|ZP_04099554.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229124986|ref|ZP_04254160.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus 95/8201] gi|229187712|ref|ZP_04314848.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus BGSC 6E1] gi|229600914|ref|YP_002869692.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. A0248] gi|254687076|ref|ZP_05150934.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. CNEVA-9066] gi|254724141|ref|ZP_05185926.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. A1055] gi|254735158|ref|ZP_05192868.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. Western North America USA6153] gi|254742133|ref|ZP_05199820.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. Kruger B] gi|254755957|ref|ZP_05207989.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. Vollum] gi|254761363|ref|ZP_05213385.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. Australia 94] gi|301056957|ref|YP_003795168.1| glucose-inhibited division protein A [Bacillus anthracis CI] gi|38372308|sp|Q81JH3|MNMG_BACAN RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|81170518|sp|Q6HAF3|MNMG_BACHK RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|166222907|sp|A0RLR1|MNMG_BACAH RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|30260179|gb|AAP29364.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. Ames] gi|47506217|gb|AAT34893.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. 'Ames Ancestor'] gi|49182247|gb|AAT57623.1| glucose-inhibited division protein A [Bacillus anthracis str. Sterne] gi|49332692|gb|AAT63338.1| glucose-inhibited division protein A [Bacillus thuringiensis serovar konkukian str. 97-27] gi|118419735|gb|ABK88154.1| glucose-inhibited division protein A [Bacillus thuringiensis str. Al Hakam] gi|164711250|gb|EDR16806.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. A0488] gi|167510295|gb|EDR85698.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. A0193] gi|167529571|gb|EDR92321.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. A0442] gi|170127570|gb|EDS96444.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. A0389] gi|170666575|gb|EDT17348.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. A0465] gi|172080192|gb|EDT65284.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. A0174] gi|227002905|gb|ACP12648.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. CDC 684] gi|228595780|gb|EEK53464.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus BGSC 6E1] gi|228658487|gb|EEL14153.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus 95/8201] gi|228822972|gb|EEM68813.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228829208|gb|EEM74845.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228841575|gb|EEM86691.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229265322|gb|ACQ46959.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. A0248] gi|300379126|gb|ADK08030.1| glucose-inhibited division protein A [Bacillus cereus biovar anthracis str. CI] Length = 629 Score = 543 bits (1400), Expect = e-152, Method: Compositional matrix adjust. Identities = 284/622 (45%), Positives = 393/622 (63%), Gaps = 13/622 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEDGECKGVITQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVILGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G ++G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEVGHEIGLITEERYERFTNKKLQIEQEKERLSSIIIK 486 Query: 485 S--------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 +N+ + + +DG A + L P+ + +++ + P + S V E++ Sbjct: 487 PRPEVQELIRNIGGSEL---KDGI--RASDLLRRPEMTYEHIHLLVPSEVELSDEVKEQV 541 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS Sbjct: 542 EIQIKYEGYIEKSLQQVERMKKMENKKIPVDIDYDAISSLASEARQKLKDVRPLSMGQAS 601 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+ PA +++LL+YI++ + Sbjct: 602 RISGVNPADISILLVYIEQGKI 623 >gi|295698336|ref|YP_003602991.1| glucose-inhibited division protein A [Candidatus Riesia pediculicola USDA] gi|291157273|gb|ADD79718.1| glucose-inhibited division protein A [Candidatus Riesia pediculicola USDA] Length = 622 Score = 543 bits (1400), Expect = e-152, Method: Compositional matrix adjust. Identities = 292/630 (46%), Positives = 398/630 (63%), Gaps = 22/630 (3%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + ++DVIV+GGGHAG E A ++K+G T LITH IG +SCNP+IGG+GKGHLV+E Sbjct: 1 MKNNFDVIVVGGGHAGSEGAFASSKIGCKTLLITHNMRKIGELSCNPSIGGIGKGHLVKE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDA+DG+M AD +GI F+ LN KKG AV+ R Q DR+ Y+ ++ ++ Q+N+ +IQ Sbjct: 61 IDAMDGIMAVAADESGIHFKKLNSKKGSAVQSTRVQVDRKKYKSSVINQMKKQKNIFIIQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V N + + +++ +VVL+ GTFL G IHIG GR+ D S + Sbjct: 121 QSVKKLILRNNRVIGVTTEEDIQFFSKSVVLSAGTFLNGRIHIGSKIFSGGRIRDVSSIT 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIE 239 L F F RLKTGTP R+D KTI + EKQ D + FSF+ DK +QI Sbjct: 181 LIKQLRCFPFKIKRLKTGTPPRIDTKTIDFSCLEKQLGDYPISHFSFLKKIDKY-RKQIT 239 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH II+EN+ S IYSG I+ GPRYCPSIEDKIV+F ++ H IFLEPEG Sbjct: 240 CYITHTNDKTHEIILENLHKSPIYSGKIQGIGPRYCPSIEDKIVKFQNQSSHHIFLEPEG 299 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 + + VYPNGIST+LP +IQ +F+R+I GLEK II PGYA+EYD+ +P++L TLE+K Sbjct: 300 IRSRKVYPNGISTSLPVDIQEKFVRSIRGLEKAKIIDPGYAVEYDFFDPRDLKQTLESKI 359 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLFLAGQINGTTGYEEAA+QGL+AG+N+A S K D R +YIGV+IDDL + G Sbjct: 360 IDGLFLAGQINGTTGYEEAASQGLIAGLNAALYSLKEDQWYPKRDQAYIGVLIDDLCTVG 419 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR-----------QKRFAKYI 468 EPYRMFT+R+EYR+SLR DNAD RLT +G LG + + R +K F K+ Sbjct: 420 TEEPYRMFTARSEYRLSLREDNADLRLTKLGYSLGVVRKERLSILKKKIKLIEKEFIKF- 478 Query: 469 QEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF 528 + +L+ K + ++NL S+ KT E L P+ + + LF + K Sbjct: 479 -RHTWLKKGSKKFEIMNENLRSSC------NKTINIEELLKRPEVTCEKLFQFGILSEKD 531 Query: 529 SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 + + + L+ + Y Y +Q +E ++ F E IPKD Y + LS E+ KL K Sbjct: 532 NMEIYKILESQIKYRGYIKKQELEIQKKNFYENIKIPKDIKYQKICGLSKEVLSKLDYHK 591 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIKKNTV 618 P ++ QAS+I G+TP+A+++LLI++KK V Sbjct: 592 PNSIGQASRISGVTPSAISILLIWMKKRKV 621 >gi|47568682|ref|ZP_00239379.1| glucose inhibited division protein A [Bacillus cereus G9241] gi|228988712|ref|ZP_04148797.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|47554670|gb|EAL13024.1| glucose inhibited division protein A [Bacillus cereus G9241] gi|228771024|gb|EEM19505.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 629 Score = 543 bits (1400), Expect = e-152, Method: Compositional matrix adjust. Identities = 284/622 (45%), Positives = 393/622 (63%), Gaps = 13/622 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEDGECKGVITQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVILGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G ++G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEVGREIGLITEERYERFTNKKLQIEQEKERLSSIIIK 486 Query: 485 S--------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 +N+ + + +DG A + L P+ + +++ + P + S V E++ Sbjct: 487 PRPEVQELIRNIGGSEL---KDGI--RASDLLRRPEMTYEHIHLLVPSEVELSDEVTEQV 541 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS Sbjct: 542 EIQIKYEGYIEKSLQQVERMKKMENKKIPVDIDYDAISSLASEARQKLKDVRPLSVGQAS 601 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+ PA +++LL+YI++ + Sbjct: 602 RISGVNPADISILLVYIEQGKI 623 >gi|220930843|ref|YP_002507752.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium cellulolyticum H10] gi|220001171|gb|ACL77772.1| glucose inhibited division protein A [Clostridium cellulolyticum H10] Length = 627 Score = 543 bits (1399), Expect = e-152, Method: Compositional matrix adjust. Identities = 285/622 (45%), Positives = 401/622 (64%), Gaps = 18/622 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YD++V+GGGHAGCEAA AA+LG ST + + +I +M CNP+IGG KGHLVREIDA Sbjct: 7 NYDIVVVGGGHAGCEAALAAARLGCSTIIFSINLDSIANMPCNPSIGGTAKGHLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ ++LN KGPAV R Q DR Y++ M+ + QENLD+ Q EV Sbjct: 67 LGGQMGKATDKTFIQSKILNSSKGPAVYSLRAQVDRRQYQMEMKNILEKQENLDIRQSEV 126 Query: 125 AGFNTEKNI--ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 T++N ++ + ++ C VVLTTGT+L+G I IG + G G P+N L Sbjct: 127 VEILTDENKTKVTGVKTHTGAIFHCKAVVLTTGTYLKGRIFIGDVNYSGGPDGLFPANKL 186 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGI 242 S + R KTGTPARL+ +++ + K +Q D+ ++PFSF T+KI Q+ C + Sbjct: 187 SESLQNLGLNLIRFKTGTPARLNRQSLNFSKMSEQPGDDVIVPFSFETEKIDKEQVSCWL 246 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN ETH +I NI S +YSG+I GPRYCPSIEDK+VRF ++ HQ+F+EP GL T Sbjct: 247 TYTNQETHEVIKRNIHKSPLYSGNITGVGPRYCPSIEDKVVRFSDKEHHQVFVEPMGLET 306 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + +Y G+S++LPE++Q +F+RTIPGLE V ++R YAIEYD I+ +L +LE K ++G Sbjct: 307 EEMYLQGMSSSLPEDVQIEFMRTIPGLENVKVMRSAYAIEYDGIDATQLKLSLEYKDVAG 366 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQING++GYEEAAAQG+VAGIN+ K + + F R+ +YIGV+IDDL +KG E Sbjct: 367 LFSAGQINGSSGYEEAAAQGIVAGINAVMKIKNREPLVFDRSQAYIGVLIDDLVTKGTKE 426 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRM TSRAEYR+ LR DNAD RLTPIG ++G I E R KRF +++ + ++ L Sbjct: 427 PYRMMTSRAEYRLLLRQDNADLRLTPIGREIGLISEERYKRF---LEKKEMIEKEIERLK 483 Query: 483 LTSKNLSSTSISFKQDGKTRTAY-------EFLSYPDFSIQNLFSIC--PDARKFSSLVI 533 T S S+ ++ + TA E L P+ S ++L IC PD V Sbjct: 484 KTYLPPSEKVQSYLEN-RNSTAIKSGIQVTELLRRPEISYESLSEICELPD---LPRAVR 539 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E++++ Y Y RQM + ++ K E R +P D DY+ + L E ++KLS +KP ++ Sbjct: 540 EQVEVAVKYEGYIKRQMQQVEQYKKLEGRKLPHDIDYNEIQGLRLEARQKLSQIKPDSIG 599 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I G++PA +++LLIY+++ Sbjct: 600 QASRITGVSPADISVLLIYLEQ 621 >gi|228949205|ref|ZP_04111473.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228810488|gb|EEM56841.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 629 Score = 543 bits (1399), Expect = e-152, Method: Compositional matrix adjust. Identities = 284/622 (45%), Positives = 393/622 (63%), Gaps = 13/622 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEDGECKGVITQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVILGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G ++G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEVGHEIGLITEERYERFTNKKLQIEKEKERLSSIIIK 486 Query: 485 S--------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 +N+ + + +DG A + L P+ + +++ + P + S V E++ Sbjct: 487 PRPEVQELIRNIGGSEL---KDGI--RASDLLRRPEMTYEHIHLLVPSEVELSDEVKEQV 541 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS Sbjct: 542 EIQIKYEGYIEKSLQQVERMKKMENKKIPVDIDYDAISSLASEARQKLKDVRPLSMGQAS 601 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+ PA +++LL+YI++ + Sbjct: 602 RISGVNPADISILLVYIEQGKI 623 >gi|167582846|ref|ZP_02375720.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia thailandensis TXDOH] Length = 657 Score = 543 bits (1399), Expect = e-152, Method: Compositional matrix adjust. Identities = 288/625 (46%), Positives = 389/625 (62%), Gaps = 15/625 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN KGPAV R QADR LY+ A++R + +Q NL + Q V Sbjct: 67 GGAMAAATDEGGIQFRILNSSKGPAVHATRAQADRVLYKQAIRRYLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IH+G GR GD + SL + Sbjct: 127 DLMVEGDRVVGAVTQVGVRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSSR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQIECGIT 243 + GRLKTGTP R+DG+TI + K E+Q D IP FSF+ + Q+ C +T Sbjct: 187 LKELKLPQGRLKTGTPPRIDGRTIDFSKLEEQPGDLDPIPVFSFLGRPEQHPEQLPCWVT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T+ Sbjct: 247 HTNERTHDIIRSGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP ++Q + ++ GLE+ +I+RPGYAIEYDY +P+ L +LETK I+GL Sbjct: 307 EFYPNGISTSLPFDVQLALVHSMRGLEQAHILRPGYAIEYDYFDPRALKSSLETKAINGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ R + + + C R +Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGINAGRHALEKEAWCPRRDQAYLGVLVDDLVTRGVSEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F + + L++ + Sbjct: 427 YRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDDVRWDAFNRKRDAVSRETERLRTTWV 486 Query: 484 TSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----CPDARKFS------S 530 T K L +T + K + E L P S + + C + + + Sbjct: 487 TPKTLPADEATELLGKPIDHEYSLAELLRRPGISYDGVCGLRGGECGPSEPLAEDALLLA 546 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 + E+++I Y Y RQ E + E +P DY+ + LS E+ +KL+ +P Sbjct: 547 QIKEQIEIGIKYQGYIERQAGEIERNGANENTRLPDGIDYTEVRGLSFEVSQKLNQFRPE 606 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 + QAS+I G+TPAA++LL++++KK Sbjct: 607 TIGQASRISGVTPAAISLLMVHLKK 631 >gi|218711034|ref|YP_002418655.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio splendidus LGP32] gi|254811523|sp|B7VN07|MNMG_VIBSL RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|218324053|emb|CAV20415.1| gid A : glucose inhibited division protein A [Vibrio splendidus LGP32] Length = 631 Score = 543 bits (1399), Expect = e-152, Method: Compositional matrix adjust. Identities = 283/625 (45%), Positives = 392/625 (62%), Gaps = 13/625 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + +DVIV+GGGHAG EAA +A+ G ST L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHEKFDVIVVGGGHAGTEAALASARTGQSTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAFVRNVLENTPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E++ + +V Q R + VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQSVDDLIVEQDQVVGVVTQMGLKFRANAVVLTVGTFLGGKIHIGMESSSGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + F RLKTGTP R+D +++ + + E Q D FSFM ++ RQI Sbjct: 182 ALADRLRDLPFRVDRLKTGTPPRIDARSVDFSELEVQHGDNPTPVFSFMGNRAQQPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CYITHTNENTHDVIRANLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q + + ++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTHELYPNGISTSLPFDVQVKIVHSMKGFENAHIVRPGYAIEYDFFDPRDLKLTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG+N++ + + R +Y+GV+IDDL++ G Sbjct: 362 IKGLFFAGQINGTTGYEEAAAQGLMAGLNASLFTQGKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG + + R RF + ++ R LK Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADIRLTEKSRELGLVDDARWTRFNEKMENMEKERQRLK 481 Query: 480 SLVLTSKN--------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL 531 + K+ + T +S + G+ ++Y + + F + ++ S Sbjct: 482 ETWINPKSEDIDQLNQILKTPMSREASGEDLLRRPEMTYSQLTSLDRFGPALEDQQAS-- 539 Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 E+++I+ Y Y RQ E ++ E +P D DYS + LSNE+ KL+ KP + Sbjct: 540 --EQVEIQVKYDGYIQRQQDEIEKSLRHENTKLPADIDYSKVKGLSNEVVLKLTTAKPDS 597 Query: 592 LLQASKIEGMTPAALNLLLIYIKKN 616 + AS+I G+TPAA+++LL+Y+KK+ Sbjct: 598 IGIASRISGITPAAISILLVYLKKH 622 >gi|160877619|ref|YP_001556935.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shewanella baltica OS195] gi|189039356|sp|A9KX17|MNMG_SHEB9 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|160863141|gb|ABX51675.1| glucose inhibited division protein A [Shewanella baltica OS195] gi|315269817|gb|ADT96670.1| glucose inhibited division protein A [Shewanella baltica OS678] Length = 629 Score = 543 bits (1399), Expect = e-152, Method: Compositional matrix adjust. Identities = 293/615 (47%), Positives = 382/615 (62%), Gaps = 5/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA++G+ T L+TH T+G MSCNPAIGG+GKGHLV+EIDAL Sbjct: 7 FDVIVVGGGHAGTEAALAAARMGSKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D AGIQFR LN KGPAVR R QADR LYR +Q + +Q NL + Q V Sbjct: 67 GGAMAIATDYAGIQFRTLNSSKGPAVRATRAQADRALYRQKIQNILQNQPNLRIFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + +V Q VVLTTGTFL G IHIG GR GD P+ +L N Sbjct: 127 DLIVENHQVVGVVTQMGLAFESPAVVLTTGTFLSGKIHIGLENYSGGRAGDPPAIALANR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D TI + + +Q D L SFM D + +QI C IT Sbjct: 187 LRELPIRVGRLKTGTPPRIDANTIDFSQMAEQKGDSPLPVMSFMGDVSHHPKQISCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH II + S +YSG I+ GPRYCPSIEDKI RF +++ HQIF+EPEGLNT Sbjct: 247 TNEKTHEIIRGGLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKSSHQIFIEPEGLNTSE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q +R+I G+E I+RPGYAIEYDY +P++L +LETK I+GLF Sbjct: 307 IYPNGISTSLPFDVQLNLVRSIKGMENAEIMRPGYAIEYDYFDPRDLKNSLETKAINGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG+N++ + + C R ++Y+GV++DDL++ G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGMNASLQVQGKEAWCPRRDEAYLGVLVDDLSTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNF-LRSLLKSLVL 483 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F++ ++ L+ L V Sbjct: 427 RMFTSRAEYRLLLREDNADIRLTAKGRELGLVDDARWAAFSEKLESIELELQRLRGQWVH 486 Query: 484 TSKNLSSTSISFKQDGKTRTAY--EFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 + L +R A E L P+ L I E++QI+ Sbjct: 487 PNSPLIHALNPHLNTPISREASFEELLRRPEMDYSKLMQIEGFGPGLEDPQAAEQVQIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y+ Y RQ E + E +P DY +P LSNE+ KL+ KP + QAS+I G Sbjct: 547 KYSGYIQRQQEEINKAVRNENTGLPLTLDYKEVPGLSNEVIAKLNNHKPETIGQASRISG 606 Query: 601 MTPAALNLLLIYIKK 615 +TPAA+++LL+++KK Sbjct: 607 ITPAAISILLVHLKK 621 >gi|268680449|ref|YP_003304880.1| glucose inhibited division protein A [Sulfurospirillum deleyianum DSM 6946] gi|268618480|gb|ACZ12845.1| glucose inhibited division protein A [Sulfurospirillum deleyianum DSM 6946] Length = 624 Score = 543 bits (1399), Expect = e-152, Method: Compositional matrix adjust. Identities = 293/614 (47%), Positives = 388/614 (63%), Gaps = 5/614 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAG EA+ AA+LG T LI+ IG+ SCNPAIGGL KGHLV+EIDAL Sbjct: 3 YDVIVIGGGHAGIEASLAAARLGNKTLLISILAEQIGAASCNPAIGGLAKGHLVKEIDAL 62 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D AGIQFR LN+ KGPAVRG R Q D + YR+ M+ IL+ ENL V Q Sbjct: 63 GGQMALATDNAGIQFRTLNLSKGPAVRGSRAQIDMDRYRIYMRTIILNTENLYVAQEMAE 122 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 ++ ++ ++ Q + V+LTTGTFL G+IHIG+ + AGR+G+ PS +L S Sbjct: 123 TLVAQEGKVTGVITQFGNHYHAPKVILTTGTFLNGLIHIGEFQQEAGRVGEFPSRTLSES 182 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR--QIECGIT 243 GRLKTGT AR+D K+I + K E Q DE +PFSF T + T + Q+ C IT Sbjct: 183 IKSLGITMGRLKTGTCARIDAKSIDFSKMELQPGDENPLPFSFRTTRETFKPFQLPCYIT 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N + +++G I GPRYCPSIEDKI RF ++ H +F+EP+ Sbjct: 243 YTNEDTHTLIESNFHRAPLFTGQISGIGPRYCPSIEDKINRFRDKERHHLFIEPQTREAT 302 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 Y NG +T+LP + Q I ++ G+E I+R GYAIEYDY++P EL +LETKKI GL Sbjct: 303 EYYINGFATSLPTDTQLNMIHSVEGMENARIVRYGYAIEYDYVDPTELKHSLETKKIEGL 362 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGTTGYEEAAAQGL+AGIN++ + + F R ++YIGV+IDDL +KG EP Sbjct: 363 YCAGQINGTTGYEEAAAQGLMAGINASLALRDEEPLIFRRDEAYIGVLIDDLVTKGTKEP 422 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RL P G KLG I E+ ++ K +E N + L++ L Sbjct: 423 YRMFTSRAEYRLLLREDNADLRLMPYGYKLGLIDEQTHQKMVKKRKELNEGVAYLEATTL 482 Query: 484 TSKNLSSTSI-SFKQDGKTR--TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 T N ++ + S +D T T + ++ +FSI+ L I P + F+ E++ IE+ Sbjct: 483 TPSNENNAFLASIGEDKITDKVTLQKIVARSEFSIEKLEKIAPCVQNFTEEAKEQILIEA 542 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y +Q + +K IP D+SS+ LSNE+ EKL P L AS+I G Sbjct: 543 KYKNYIEKQKEQIDIMKEMMDVKIPPMMDFSSISGLSNEVVEKLQRFNPPTLFAASEISG 602 Query: 601 MTPAALNLLLIYIK 614 +TPAAL++L +YIK Sbjct: 603 ITPAALDILHVYIK 616 >gi|313202486|ref|YP_004041144.1| glucose inhibited division protein a [Methylovorus sp. MP688] gi|312441802|gb|ADQ85908.1| glucose inhibited division protein A [Methylovorus sp. MP688] Length = 631 Score = 543 bits (1399), Expect = e-152, Method: Compositional matrix adjust. Identities = 285/615 (46%), Positives = 395/615 (64%), Gaps = 6/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++G T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALASARMGQKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q V Sbjct: 67 GGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRVLYKAAIRRRLENQANLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + + +V Q VVLT GTFL G++H+G AGR GD P+ SL Sbjct: 127 DIILDGTRAAGVVTQLGLRFESKAVVLTAGTFLAGLVHVGLANYQAGRAGDPPAVSLAAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+DG+TI + +Q D+ + FSF+ + + Q+ C IT Sbjct: 187 LREIGLPAGRLKTGTPPRIDGRTIDYSVMLEQPGDDPVPVFSFLGNASQHPAQLPCWITS 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II + S +Y+G I+ GPRYCPS+EDKI RF ++ HQIFLEPEGL T+ Sbjct: 247 TNERTHDIIRSGLDRSPMYTGVIEGVGPRYCPSVEDKIHRFADKESHQIFLEPEGLTTNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP +IQ+Q +R+I GLE +I+RPGYAIEYDY +P+ L +LETK + GLF Sbjct: 307 IYPNGISTSLPFDIQYQLVRSIKGLENAHILRPGYAIEYDYYDPRGLKNSLETKAVQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG N+A + + D C +R +Y+GV++DDL ++GV EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGANAALYAQEKDSWCPARDQAYLGVLVDDLITRGVSEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAK----YIQEYNFLRSLLKS 480 RMFTSRAEYR+ LR DNAD RLT G ++G + + R + F++ ++E LR Sbjct: 427 RMFTSRAEYRLMLREDNADMRLTEAGRRIGLVDDARWEAFSRKQEAILREQERLRKTYVH 486 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 S ++ + KQ + + +E L P+ S + L ++ + V ++++I + Sbjct: 487 PGQVSADVMEKVLG-KQIDREYSMFELLRRPEVSYEALLTLAEGDGEQDEQVRQQIEIAA 545 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E + + +E +P D DY + LS E ++KL+ KP + QAS+I G Sbjct: 546 KYQGYIDRQADEIERQRGQEDTPLPADMDYREVHGLSIEAQQKLNAQKPETVGQASRISG 605 Query: 601 MTPAALNLLLIYIKK 615 +TPAA++LLL+++K+ Sbjct: 606 ITPAAISLLLVHLKR 620 >gi|91229124|ref|ZP_01262897.1| glucose-inhibited division protein A [Vibrio alginolyticus 12G01] gi|269965286|ref|ZP_06179407.1| glucose-inhibited division protein A [Vibrio alginolyticus 40B] gi|91187436|gb|EAS73779.1| glucose-inhibited division protein A [Vibrio alginolyticus 12G01] gi|269830087|gb|EEZ84315.1| glucose-inhibited division protein A [Vibrio alginolyticus 40B] Length = 631 Score = 543 bits (1399), Expect = e-152, Method: Compositional matrix adjust. Identities = 287/626 (45%), Positives = 387/626 (61%), Gaps = 15/626 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA +A+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHENFDVIVVGGGHAGTEAALASARTGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAEAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRNALENAPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E++ +V Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQSVDDLIVEQDRAVGVVTQMGLRFHAKAVVLTVGTFLGGKIHIGMESSSGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D +T+ + E Q D FSFM + + RQI Sbjct: 182 ALADRLRELPFRVDRLKTGTPPRIDARTVDFSVLEAQHGDNPTPVFSFMGKREQHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CFITHTNEQTHDVIRSNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTHELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 IHGLFFAGQINGTTGYEEAAAQGLMAGLNASLFSQDKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG I + R RF + I R LK Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLIDDVRWARFNEKINNMETERQRLK 481 Query: 480 SLVLTSKN--------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SS 530 + + K+ L T ++ + G+ + L P+ + L + A Sbjct: 482 ATWMNPKSEGVDELNKLLKTPMAREASGE-----DLLRRPEITYSQLTQLEAFAPALEDQ 536 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 E+++I+ Y Y RQ E ++ E +P D DY + LSNE+ KLS KP Sbjct: 537 QAAEQVEIQVKYDGYIKRQQEEIEKSLRHENTKLPADLDYRDVKGLSNEVVAKLSEAKPE 596 Query: 591 NLLQASKIEGMTPAALNLLLIYIKKN 616 ++ AS+I G+TPAA+++LL+++KK+ Sbjct: 597 SIGIASRISGITPAAISILLVHLKKH 622 >gi|171315838|ref|ZP_02905069.1| glucose inhibited division protein A [Burkholderia ambifaria MEX-5] gi|171099027|gb|EDT43812.1| glucose inhibited division protein A [Burkholderia ambifaria MEX-5] Length = 656 Score = 543 bits (1399), Expect = e-152, Method: Compositional matrix adjust. Identities = 287/625 (45%), Positives = 387/625 (61%), Gaps = 15/625 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D +GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 67 GGAMAAATDESGIQFRILNSSKGPAVRATRAQADRILYKAAIRHRLENQSNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 127 DLMVEGDRVVGAVTQIGIRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQIECGIT 243 + GRLKTGTP R+DG++I + K ++Q D IP FSF+ + +Q+ C +T Sbjct: 187 LKELKLPQGRLKTGTPPRIDGRSIDFSKLDEQPGDLDPIPVFSFLGRAEQHPQQLPCWVT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPEGL T+ Sbjct: 247 HTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPEGLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP ++Q + + ++ GLE +I+RPGYAIEYDY +P+ L +LETK I+GL Sbjct: 307 EFYPNGISTSLPFDVQLELVHSMRGLENAHILRPGYAIEYDYFDPRALKASLETKAINGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+ R + D C R +Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGLNAGRYVQEKDAWCPRRDQAYLGVLVDDLVTRGVAEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F++ + LKS + Sbjct: 427 YRMFTSRAEYRLSLREDNADMRLTEIGRELGLVDDARWDAFSRKRDAVSRETERLKSTWV 486 Query: 484 TSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----CPDARKFSS------ 530 T K L +T++ K + E L P + + C A + Sbjct: 487 TPKTLPPEEATALLGKAIDHEYSLAELLRRPGIGYDGVCGLKGGECAPAEPLADDPVLLE 546 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 + E+++I Y Y RQ E + E +P DY + LS E+ +KL+ +P Sbjct: 547 QIKEQVEIGIKYQGYIERQASEIERNDANENTRLPDGIDYREVRGLSFEVSQKLNEFRPE 606 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 + QAS+I G+TPAA++LL++++K+ Sbjct: 607 TIGQASRISGVTPAAISLLMVHLKR 631 >gi|33598994|ref|NP_886554.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bordetella bronchiseptica RB50] gi|81170526|sp|Q7WRF1|MNMG_BORBR RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|33575040|emb|CAE30503.1| glucose inhibited division protein A [Bordetella bronchiseptica RB50] Length = 639 Score = 543 bits (1399), Expect = e-152, Method: Compositional matrix adjust. Identities = 297/627 (47%), Positives = 405/627 (64%), Gaps = 17/627 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R +DVIV+GGGHAG EAA AA+ GA T L+TH T+G MSCNP+IGG+GKGHLV+E+D Sbjct: 5 REFDVIVVGGGHAGTEAALAAARAGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q Sbjct: 65 ALGGAMAIATDEAGIQFRILNSSKGPAVRATRAQADRVLYRNAIRARLENQPNLWLFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + + + V Q R TVVLT GTFL G+IH+G GR GD P+NSL Sbjct: 125 VDDLMVQGDQVVGAVTQIGLRFRARTVVLTAGTFLNGLIHVGLQNYSGGRAGDPPANSLG 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTD-KITNRQIECG 241 + GRLKTGTP R+DG++I + E+Q D +P FSF+ + RQ+ C Sbjct: 185 QRLKELQLPQGRLKTGTPPRIDGRSINYSVLEEQPGDLDPVPVFSFLGKASMHPRQLPCW 244 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT TN TH II + S +YSG I+ GPRYCPSIEDKI RF ++ HQ+FLEPEGLN Sbjct: 245 ITHTNARTHEIIRGGLDRSPMYSGVIEGVGPRYCPSIEDKIHRFADKASHQVFLEPEGLN 304 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T +YPNG+ST+LP ++Q++ I ++PGLE +I+RPGYAIEYDY +P+ L TLETK IS Sbjct: 305 THEIYPNGVSTSLPFDVQYELIHSLPGLENAHILRPGYAIEYDYFDPRALKSTLETKAIS 364 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQINGTTGYEEAAAQGL+AG N+A ++ + R ++Y+GV++DDL ++GV Sbjct: 365 GLFFAGQINGTTGYEEAAAQGLLAGANAALQAQGKEPWVPRRDEAYLGVLVDDLVTRGVT 424 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAK----YIQEYNFLRS- 476 EPYRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F++ QE L+S Sbjct: 425 EPYRMFTSRAEYRLSLREDNADLRLTEIGRRLGLVDDVRWDAFSRKRDAVAQEVERLKST 484 Query: 477 LLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-------- 528 + VL + ++ ++ K + + + L P+ S + L D + Sbjct: 485 WVNPRVLPAH--AAEALLGKAIEREYSLSDLLKRPNVSYEALMQARTDEGELLAGPGVLE 542 Query: 529 SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 ++ E+++ + YA Y RQ E ++ E++ IP D DY ++ +LS E+++KL + Sbjct: 543 DDVLAEQVETQVKYAGYIARQQDEVQKHLSHEQQPIPADIDYDAVTSLSFEVRQKLKTHR 602 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIKK 615 P + QA+++ G+TPAA++LLLI++K+ Sbjct: 603 PETIGQAARVSGVTPAAISLLLIHLKR 629 >gi|84394517|ref|ZP_00993227.1| glucose inhibited division protein A [Vibrio splendidus 12B01] gi|84374870|gb|EAP91807.1| glucose inhibited division protein A [Vibrio splendidus 12B01] Length = 631 Score = 543 bits (1398), Expect = e-152, Method: Compositional matrix adjust. Identities = 283/625 (45%), Positives = 391/625 (62%), Gaps = 13/625 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + +DVIV+GGGHAG EAA +A+ G ST L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHEKFDVIVVGGGHAGTEAALASARTGQSTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAFVRNVLENTPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E++ + +V Q R + VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQSVDDLIVEQDQVVGVVTQMGLKFRANAVVLTVGTFLGGKIHIGMESSSGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + F RLKTGTP R+D +++ + + E Q D FSFM + RQI Sbjct: 182 ALADRLRDLPFRVDRLKTGTPPRIDARSVDFSELEVQHGDNPTPVFSFMGSRAQQPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CYITHTNENTHDVIRANLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q + + ++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTHELYPNGISTSLPFDVQVKIVHSMKGFENAHIVRPGYAIEYDFFDPRDLKLTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG+N++ + + R +Y+GV+IDDL++ G Sbjct: 362 IKGLFFAGQINGTTGYEEAAAQGLMAGLNASLFTQGKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG + + R RF + ++ R LK Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADIRLTEKSRELGLVDDARWVRFNEKVENMEKERQRLK 481 Query: 480 SLVLTSKN--------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL 531 + K+ + T +S + G+ ++Y + + F + ++ S Sbjct: 482 ETWINPKSEDVDQLNQILKTPMSREASGEDLLRRPEMTYSQLTALDRFGPALEDQQAS-- 539 Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 E+++I+ Y Y RQ E ++ E +P D DYS + LSNE+ KL+ KP + Sbjct: 540 --EQVEIQVKYDGYIQRQQDEIEKSLRHENTKLPADIDYSKVKGLSNEVVLKLTTAKPDS 597 Query: 592 LLQASKIEGMTPAALNLLLIYIKKN 616 + AS+I G+TPAA+++LL+Y+KK+ Sbjct: 598 IGIASRISGITPAAISILLVYLKKH 622 >gi|295402128|ref|ZP_06812087.1| glucose inhibited division protein A [Geobacillus thermoglucosidasius C56-YS93] gi|312112751|ref|YP_003991067.1| glucose inhibited division protein A [Geobacillus sp. Y4.1MC1] gi|294975811|gb|EFG51430.1| glucose inhibited division protein A [Geobacillus thermoglucosidasius C56-YS93] gi|311217852|gb|ADP76456.1| glucose inhibited division protein A [Geobacillus sp. Y4.1MC1] Length = 629 Score = 543 bits (1398), Expect = e-152, Method: Compositional matrix adjust. Identities = 285/619 (46%), Positives = 396/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+G GHAGCEAA AA++GA T +IT I M CNP+IGG KG +VREIDA Sbjct: 7 SYDVIVVGAGHAGCEAALAAARIGAKTLVITLNLDMIAFMPCNPSIGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M R D IQ R+LN KGPAVR R QAD+ LY+ M++ + +QENL ++QG+V Sbjct: 67 LGGEMARNIDKTYIQMRMLNTGKGPAVRALRAQADKVLYQREMKKTLENQENLTLLQGKV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ + TVV+TTGTFLRG I IG +K +G PS L Sbjct: 127 ERLIVEDGVCKGVITHTGAHYYAKTVVITTGTFLRGEIIIGDIKYSSGPNNQQPSIKLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F+ R KTGTP R++ +TI + KTE Q D+ FS+ T + Q+ C +T Sbjct: 187 HLEELGFELVRFKTGTPPRVNSRTIDYSKTEIQPGDDVPRAFSYETTEYITDQLPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETHRII EN+ S +YSG IK GPRYCPSIEDKIVRF ++ HQIFLEPEG T+ Sbjct: 247 TTPETHRIIDENLHLSPMYSGMIKGTGPRYCPSIEDKIVRFHDKPRHQIFLEPEGRETEE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE IQ Q + TIPGLEK ++R GYAIEYD I P +L+PTLETK + L+ Sbjct: 307 VYVQGLSTSLPEHIQRQLLATIPGLEKAQLMRAGYAIEYDAIVPTQLWPTLETKLVKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QG++AGIN+AR++ + I SR+D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGIMAGINAARRALGKEEIILSRSDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL- 483 R+ TSRAEYR+ LR DNAD RLT +G K+G I E R ++F + + L++ ++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTELGYKIGLISEERYQKFLAKKEAIEREKKRLQTFIIK 486 Query: 484 ----TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 K + S +DG R A + L P+ + +++ + P + S V E+++I+ Sbjct: 487 PTPEVQKVIREAGGSELKDG-IRAA-DLLRRPEMTYEHIKQLAPAEEEISPEVAEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + + +K E + IP+D DY ++ L+ E ++KL ++P ++ QAS+I Sbjct: 545 IKYEGYIQKSLQQVERLKKMENKKIPEDIDYDAIHGLATEARQKLKQVRPLSIAQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+Y+++ + Sbjct: 605 GVNPADISILLVYLEQGRI 623 >gi|229159043|ref|ZP_04287099.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus ATCC 4342] gi|228624462|gb|EEK81233.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus ATCC 4342] Length = 629 Score = 543 bits (1398), Expect = e-152, Method: Compositional matrix adjust. Identities = 284/622 (45%), Positives = 393/622 (63%), Gaps = 13/622 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEDGECKGVITQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVILGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G ++G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEVGREIGLITEERYERFTNKKLQIEQEKERLSSIIIK 486 Query: 485 S--------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 +N+ + + +DG A + L P+ + +++ + P + S V E++ Sbjct: 487 PRPEVQELIRNIGGSEL---KDGI--RASDLLRRPEMTYEHIHLLVPSEVELSDEVKEQV 541 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS Sbjct: 542 EIQIKYEGYIEKSLQQVERMKKMENKKIPVDIDYDAISSLASEARQKLKDVRPLSVGQAS 601 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+ PA +++LL+YI++ + Sbjct: 602 RISGVNPADISILLVYIEQGKI 623 >gi|282891142|ref|ZP_06299646.1| hypothetical protein pah_c047o041 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498959|gb|EFB41274.1| hypothetical protein pah_c047o041 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 612 Score = 543 bits (1398), Expect = e-152, Method: Compositional matrix adjust. Identities = 285/615 (46%), Positives = 396/615 (64%), Gaps = 17/615 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIV+GGGHAGCEAA A+ +GA T L+T TIG MSCNPAIGG+ KGH+VREID Sbjct: 6 KKYDVIVMGGGHAGCEAAFAASGMGAQTLLLTMNLDTIGKMSCNPAIGGIAKGHIVREID 65 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G+MG+V D GIQ+R+LN +GP+V PR QAD+ Y++ ++ + Q NL++ QG Sbjct: 66 ALGGIMGKVTDVTGIQYRMLNSTRGPSVWAPRAQADKNAYQMEVKYRLEKQPNLEIKQGT 125 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 + E + I ++ ++ + ST+++++GTFLRG++HIG+ GR GD PS L Sbjct: 126 IEDLIVENDRIQGVITKEGIIYYTSTLIISSGTFLRGLLHIGETNYSGGRAGDQPSVGLS 185 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSF-MTDKITNRQIECGI 242 S KF F GRLKTGTP R++ ++I + TE+Q D + FSF ++ Q+ C I Sbjct: 186 ASLEKFGFKLGRLKTGTPPRVNRRSIDFSLTEEQPGDPN-VKFSFDEVERPRLPQVSCHI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T T ET +II+ NI S +YSG IK G RYCPSIEDK+VRF ++ HQIFLEPEGL T Sbjct: 245 TYTTEETKQIILANIHRSPMYSGQIKGIGTRYCPSIEDKVVRFSDKERHQIFLEPEGLQT 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + +Y NG+S++LP ++Q FI++IP L I+RP YAIEYDY+ ++ +LET + G Sbjct: 305 EEIYVNGVSSSLPFDVQLAFIQSIPALRNAEIMRPAYAIEYDYVTSGQMTASLETTHLEG 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LFLAGQINGT+GYEEAA QGL+AGIN+A K+ + SR+++YIGVMIDDL +K + E Sbjct: 365 LFLAGQINGTSGYEEAAGQGLIAGINAASKALSQPPLILSRSEAYIGVMIDDLITKKLDE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAE+R+ LR DNAD RL G + G I ++Y L+ K + Sbjct: 425 PYRMFTSRAEHRLLLRQDNADLRLRHYGYEKGIIN----------TEQYARLQHKKKMMQ 474 Query: 483 LTSKNLSSTSISFKQ-DGKTRTAYEFLSYPDFSIQNLFSICP-DARKFSSLVIERLQIES 540 + L FKQ +GK + + L P+ + Q+L + P D + +++++ Sbjct: 475 EETARLGKV---FKQLNGKGYSLAQLLCRPEITYQSLLNDYPDDVIDHGEDINMQIELDL 531 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 SYA Y RQ E + + E IP+ FD+SS+ L NE KEKL PF L QAS+I G Sbjct: 532 SYAGYIERQKGEVAKFEHLENIRIPEKFDFSSVSGLRNEAKEKLKKHFPFTLGQASRISG 591 Query: 601 MTPAALNLLLIYIKK 615 ++PA +++L+I + K Sbjct: 592 VSPADISILMIALAK 606 >gi|170694309|ref|ZP_02885463.1| glucose inhibited division protein A [Burkholderia graminis C4D1M] gi|170140732|gb|EDT08906.1| glucose inhibited division protein A [Burkholderia graminis C4D1M] Length = 652 Score = 543 bits (1398), Expect = e-152, Method: Compositional matrix adjust. Identities = 287/626 (45%), Positives = 389/626 (62%), Gaps = 15/626 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++G T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALASARMGNKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 67 GGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRLLYKQAIRHRLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 127 DLMVEGDRVVGAVTQVGIRFRSRAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQIECGIT 243 + GRLKTGTP R+DG+TI + + E+Q D +P FSF+ + RQ+ C +T Sbjct: 187 LKELKLPQGRLKTGTPPRIDGRTIDFSQLEEQPGDLDPVPVFSFLGRAEQHPRQVPCWVT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPEGL T+ Sbjct: 247 HTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPEGLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP ++Q + +R++ GLE +I+RPGYAIEYDY +P+ L +LETK ISGL Sbjct: 307 EFYPNGISTSLPFDVQLELVRSMRGLEHAHILRPGYAIEYDYFDPRGLKASLETKVISGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ D C R +Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGINAGLFVQGKDAWCPRRDQAYLGVLVDDLVTRGVSEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLT IG +LG + E R F++ + L++ + Sbjct: 427 YRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDEVRWDAFSRKRDAVSRETERLRTTWV 486 Query: 484 TSKNLS---STSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----CPDARKFS------S 530 K LS +T++ K + + L P S + ++ C + + Sbjct: 487 NPKTLSADEATALLGKPIDHEYSLADLLRRPGVSYDGVCALRAGACAAPGTLAEDEVLLA 546 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 + E+++I Y Y RQ E + + E +P+ DY+ + LS E ++KL+ +P Sbjct: 547 QIKEQIEIGIKYQGYIDRQADEIERNEAHESTRLPEGLDYAEVRGLSFEARQKLTQFRPE 606 Query: 591 NLLQASKIEGMTPAALNLLLIYIKKN 616 + QAS+I G+TPAA++LL++++K+ Sbjct: 607 TIGQASRISGITPAAISLLMVHLKRG 632 >gi|86147165|ref|ZP_01065481.1| glucose-inhibited division protein A [Vibrio sp. MED222] gi|85835049|gb|EAQ53191.1| glucose-inhibited division protein A [Vibrio sp. MED222] Length = 631 Score = 543 bits (1398), Expect = e-152, Method: Compositional matrix adjust. Identities = 283/625 (45%), Positives = 391/625 (62%), Gaps = 13/625 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + +DVIV+GGGHAG EAA +A+ G ST L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHEKFDVIVVGGGHAGTEAALASARTGQSTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAFVRNVLENTPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E++ + +V Q R + VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQSVDDLIVEQDQVVGVVTQMGLKFRANAVVLTVGTFLGGKIHIGMESSSGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + F RLKTGTP R+D +++ + E Q D FSFM ++ RQI Sbjct: 182 ALADRLRDLPFRVDRLKTGTPPRIDARSVDFSDLEVQHGDNPTPVFSFMGNRAQQPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CYITHTNENTHDVIRANLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q + + ++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTHELYPNGISTSLPFDVQVKIVHSMKGFENAHIVRPGYAIEYDFFDPRDLKLTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG+N++ + + R +Y+GV+IDDL++ G Sbjct: 362 IKGLFFAGQINGTTGYEEAAAQGLMAGLNASLFTQGKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG + + R RF + ++ R LK Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADIRLTEKSRELGLVDDARWTRFNEKMENMEKERQRLK 481 Query: 480 SLVLTSKN--------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL 531 + K+ + T +S + G+ ++Y + + F + ++ S Sbjct: 482 ETWINPKSEDIDQLNQILKTPMSREASGEDLLRRPEMTYSQLTSLDRFGPALEDQQAS-- 539 Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 E+++I+ Y Y RQ E ++ E +P D DYS + LSNE+ KL+ KP + Sbjct: 540 --EQVEIQVKYDGYIQRQQDEIEKSLRHENTKLPADIDYSKVKGLSNEVVLKLTTAKPDS 597 Query: 592 LLQASKIEGMTPAALNLLLIYIKKN 616 + AS+I G+TPAA+++LL+Y+KK+ Sbjct: 598 IGIASRISGITPAAISILLVYLKKH 622 >gi|242243259|ref|ZP_04797704.1| glucose inhibited division protein A [Staphylococcus epidermidis W23144] gi|242233208|gb|EES35520.1| glucose inhibited division protein A [Staphylococcus epidermidis W23144] Length = 630 Score = 543 bits (1398), Expect = e-152, Method: Compositional matrix adjust. Identities = 277/622 (44%), Positives = 397/622 (63%), Gaps = 3/622 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 ++ + YDV+VIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VR Sbjct: 5 IVVQEYDVVVIGAGHAGIEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVR 64 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R + +++NLD++ Sbjct: 65 EIDALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVLENEDNLDIM 124 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 QG V E N + + + R V++TTGTFLRG I +G LK +G PS Sbjct: 125 QGMVDELIIEDNEVKGVRTNIGTEYRSKAVIITTGTFLRGEIILGNLKYSSGPNHQLPSV 184 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 +L ++ K FD R KTGTP R++ +TI + KTE Q D+ FSF T + Q+ C Sbjct: 185 TLADNLRKLGFDIVRFKTGTPPRVNARTIDYSKTEIQPGDDIGRAFSFETTEFILDQLPC 244 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +T TN +TH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG Sbjct: 245 WLTYTNGDTHQVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGR 304 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 NT+ VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETK I Sbjct: 305 NTNEVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKAI 364 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 L+ AGQINGT+GYEEAA QG++AGIN+A SR+D+YIGV+IDDL +KG Sbjct: 365 KNLYTAGQINGTSGYEEAAGQGIMAGINAAGNVLGTGEKILSRSDAYIGVLIDDLVTKGT 424 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYR+ TSRAEYR+ LR DNAD RLT +G +LG I E R +F + Q+ L Sbjct: 425 NEPYRLLTSRAEYRLLLRHDNADLRLTDMGYELGLISEERYAKFNEKRQQIKDEIQRLTD 484 Query: 481 LVLTSKNLSSTSISFKQDGKTRT---AYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 + + + I K + + A + L P+ + + + I ++ + V E+++ Sbjct: 485 VRIKPNEHTQAIIEAKGGSRLKDGILAIDLLRRPEMNYETILEILEESHQLPEAVEEQVE 544 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I++ Y Y + + + +++K E + IP+D DYS + +L++E +EKL+ +KP N+ QAS+ Sbjct: 545 IQTKYEGYINKSLQQVEKVKRMEAKKIPEDLDYSKVDSLASEAREKLAEVKPLNIAQASR 604 Query: 598 IEGMTPAALNLLLIYIKKNTVK 619 I G+ PA +++LL+Y+++ ++ Sbjct: 605 ISGVNPADISILLVYLEQGKLQ 626 >gi|94263267|ref|ZP_01287083.1| Glucose-inhibited division protein A subfamily [delta proteobacterium MLMS-1] gi|93456350|gb|EAT06474.1| Glucose-inhibited division protein A subfamily [delta proteobacterium MLMS-1] Length = 629 Score = 542 bits (1397), Expect = e-152, Method: Compositional matrix adjust. Identities = 292/631 (46%), Positives = 396/631 (62%), Gaps = 17/631 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 MIN+ YD+IVIG GHAGCEAA AA+LG TA++ TIG++SCNPA+GGL KGHLV+ Sbjct: 1 MINQRYDIIVIGAGHAGCEAALAAARLGCDTAVLVMNADTIGALSCNPAVGGLAKGHLVK 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G M R DA GIQFR LN KGPAVR R QADR+ Y +++ + Q+NL + Sbjct: 61 EIDALGGEMARNIDATGIQFRRLNTSKGPAVRSSRAQADRQRYPARLKQVLEQQKNLTIR 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + ++ +R V++TTGTFL G+IHIG PAGRMGD PS Sbjct: 121 QSTVDRLLVEDKRVVGVLTSLGEELRAGAVIITTGTFLNGLIHIGLKTFPAGRMGDMPSL 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQI 238 +L + F GR+KTGT RL G +I + E QF D+ FSF + T Q+ Sbjct: 181 ALPTHLKELGFAMGRMKTGTTPRLAGNSIDYSGLEVQFGDDPPPLFSFANAGGRPTLPQL 240 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C IT T TH II S + SG I+ G RYCPSIEDK+ RF +++ HQIFLEPE Sbjct: 241 PCHITYTGAATHEIIRAGCDRSPLLSGVIEGIGARYCPSIEDKVSRFADKDRHQIFLEPE 300 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL+T VYPNGIST+LP ++Q +RTIPGLE+ ++RPGYAIEYDY++P EL P+LE+K Sbjct: 301 GLDTTEVYPNGISTSLPMDVQLAMLRTIPGLEQARLVRPGYAIEYDYVDPLELQPSLESK 360 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 +++ LFLAGQINGT+GYEEAAAQGL+AGIN+AR+ + R+ +YIGV+IDDL +K Sbjct: 361 RLANLFLAGQINGTSGYEEAAAQGLLAGINAARQLGGQPPLVLDRSQAYIGVLIDDLVTK 420 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYR+FTSRAEYR+ LR DNAD RL PIG ++G + E+R + F Q L L Sbjct: 421 GTKEPYRLFTSRAEYRLLLREDNADARLCPIGWQIGLLDEQRYRAFEHKQQTMAELHQRL 480 Query: 479 KSLVL-----TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVI 533 + + T++ L+ + S + ++ + E L P+ + + ++ A + ++ Sbjct: 481 RQTTIRPGPATNRRLAELASSPLR--QSCSLAELLKRPELDLAAVLALAQAAAEPATPAP 538 Query: 534 --------ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 +Q+E Y Y RQ + + + E +P D Y LP LS+E+ EKL Sbjct: 539 EAALPELGHEVQLEIKYEGYITRQREQVERFRKLESIRLPTDLVYRGLPGLSSEVVEKLE 598 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYIKKN 616 ++P L QA++I G+TPAAL +L +++K+ Sbjct: 599 KVRPRTLGQAARISGITPAALGVLQVHLKRE 629 >gi|163781998|ref|ZP_02176997.1| glucose-inhibited division protein A [Hydrogenivirga sp. 128-5-R1-1] gi|159882530|gb|EDP76035.1| glucose-inhibited division protein A [Hydrogenivirga sp. 128-5-R1-1] Length = 616 Score = 542 bits (1397), Expect = e-152, Method: Compositional matrix adjust. Identities = 293/634 (46%), Positives = 396/634 (62%), Gaps = 39/634 (6%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M+ ++V VIG GHAG EAA +A++GA T L T +IG MSCNPAIGG+ KG +VR Sbjct: 1 MLVEEFEVAVIGAGHAGIEAALASARMGAKTLLFTLNADSIGQMSCNPAIGGIAKGIVVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G MGR D GIQF++LN +KG AV+ PR QAD++ YR M++ QENL + Sbjct: 61 EIDALGGEMGRAIDNTGIQFKMLNTRKGKAVQSPRAQADKKRYREYMKKVCEDQENLHIK 120 Query: 121 QGEVAG-FNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 Q EV +N + ++ + R VV+TTGTFL G+I+IG PAGR + S Sbjct: 121 QDEVVDILLNARNEVVAVKTKLGIEYRVKAVVVTTGTFLNGLIYIGDKTFPAGRAWEPRS 180 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN---- 235 SL + + DF R KTGTPARLDG+TI + E+ D+ FSF T+ + + Sbjct: 181 ESLAEFYKRHDFPLLRFKTGTPARLDGRTIDYSALERAPGDDPPPKFSFWTEPVGSYWFE 240 Query: 236 ---RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQ 292 +Q++C +T T +TH II +N+ +A+Y G IK GPRYCPSIEDK+V+F ++ H Sbjct: 241 AGKKQVDCWMTYTTEKTHEIIRKNLDKTALYGGLIKGVGPRYCPSIEDKVVKFPDKPRHT 300 Query: 293 IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF 352 +FLEPEGL+T VYPNG+ST+LPEE+Q + R+IPGLEKV ++RP YAIEYD + P ELF Sbjct: 301 VFLEPEGLDTIEVYPNGLSTSLPEEVQWELYRSIPGLEKVELVRPAYAIEYDVVPPTELF 360 Query: 353 PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMI 412 PTLETKKI GLF AG NGTTGYEEAA QG+VAGIN+A ++ + I R +SYIGVMI Sbjct: 361 PTLETKKIRGLFHAGNFNGTTGYEEAAGQGIVAGINAALRALGREPIYLRRDESYIGVMI 420 Query: 413 DDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQE-- 470 DDLT+KGVLEPYR+FTSR+E+R+ LR DNA RL IG +LG + + Q + + +QE Sbjct: 421 DDLTTKGVLEPYRLFTSRSEFRLYLRQDNAILRLAEIGHRLGLLND-EQFKLVRELQEEI 479 Query: 471 ---YNFLRSLLKSLVLTSKNLSSTSISF------KQDGKTRTAYEFLSYPDFSIQNLFSI 521 F R S+ + S T + +D + + YE +P Sbjct: 480 ERWKEFYRRERVSVAVGEDTRSYTVATLFTANHTVEDVREKLGYEIPEHP---------- 529 Query: 522 CPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELK 581 V E ++IE Y Y R+ +++K E IP+D DY S+ L+NE + Sbjct: 530 ---------YVREEVEIELKYEPYIERERKLNEKLKRLEDIRIPEDIDYDSVHGLTNEAR 580 Query: 582 EKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 EKL +KP + QA++I+G+TPA++ LLI++ K Sbjct: 581 EKLKKMKPLTVGQAARIDGITPASITALLIHLGK 614 >gi|253730396|ref|ZP_04864561.1| glucose inhibited division protein A [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253725876|gb|EES94605.1| glucose inhibited division protein A [Staphylococcus aureus subsp. aureus USA300_TCH959] Length = 625 Score = 542 bits (1397), Expect = e-152, Method: Compositional matrix adjust. Identities = 285/621 (45%), Positives = 396/621 (63%), Gaps = 7/621 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VREID Sbjct: 3 QEYDVIVIGAGHAGVEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVREID 62 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R I +ENL ++QG Sbjct: 63 ALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEENLHIMQGM 122 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E N + + + V++TTGTFLRG I +G +K +G PS +L Sbjct: 123 VDELIIEDNEVKGVRTNIGTEYLSKAVIITTGTFLRGEIILGNMKYSSGPNHQLPSITLS 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 ++ + FD R KTGTP R++ KTI + KTE Q D+ FSF T + Q+ C +T Sbjct: 183 DNLRELGFDIVRFKTGTPPRVNSKTIDYSKTEIQPGDDVGRAFSFETTEYILDQLPCWLT 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN ETH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG NT+ Sbjct: 243 YTNAETHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRNTN 302 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETK I L Sbjct: 303 EVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKMIKNL 362 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGT+GYEEAA QGL+AGIN+A K SR+D+YIGV+IDDL +KG EP Sbjct: 363 YTAGQINGTSGYEEAAGQGLMAGINAAGKVLNTGEKILSRSDAYIGVLIDDLVTKGTNEP 422 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G +LG I E R RF + Q+ + L + + Sbjct: 423 YRLLTSRAEYRLLLRHDNADLRLTDMGHELGMISEERYARFNEKRQQIDAEIKRLSDIRI 482 Query: 484 TSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 K T +Q G +R A + L P+ + + + + + ++ V E+++I Sbjct: 483 --KPNEHTQAIIEQHGGSRLKDGILAIDLLRRPEMTYDIILELLEEEHQLNADVEEQVEI 540 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 ++ Y Y + + + +++K E++ IP+D DYS + +L+ E +EKLS +KP N+ QAS+I Sbjct: 541 QTKYEGYINKSLQQVEKVKRMEEKKIPEDLDYSKIDSLATEAREKLSEVKPLNIAQASRI 600 Query: 599 EGMTPAALNLLLIYIKKNTVK 619 G+ PA +++LLIY+++ ++ Sbjct: 601 SGVNPADISILLIYLEQGKLQ 621 >gi|293602669|ref|ZP_06685110.1| glucose-inhibited division protein A [Achromobacter piechaudii ATCC 43553] gi|292818860|gb|EFF77900.1| glucose-inhibited division protein A [Achromobacter piechaudii ATCC 43553] Length = 639 Score = 542 bits (1397), Expect = e-152, Method: Compositional matrix adjust. Identities = 297/623 (47%), Positives = 394/623 (63%), Gaps = 13/623 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA+ GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALAAARAGARTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGAMALATDEAGIQFRILNGSKGPAVRATRAQADRVLYRQAIRGRLENQPNLWLFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R TVVLT GTFL G+IH+G GR GD P+ SL Sbjct: 127 DLMVEGDRVVGAVTQVGLKFRAKTVVLTAGTFLNGLIHVGLQNYSGGRAGDPPAISLGQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTD-KITNRQIECGIT 243 + GRLKTGTP R+DG++I E+Q D IP FS+M + + RQ+ C IT Sbjct: 187 LKELKLPQGRLKTGTPPRIDGRSINTSILEEQPGDLDPIPVFSYMGNVSMHPRQLPCWIT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +YSG I+ GPRYCPSIEDKI RF ++ HQ+FLEPEGL+T Sbjct: 247 HTNSRTHDIIRGGLDRSPMYSGVIEGVGPRYCPSIEDKIHRFADKESHQVFLEPEGLDTH 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNG+ST+LP ++Q + I ++ GLE +I+RPGYAIEYDY +P+ L TLETK I GL Sbjct: 307 EVYPNGVSTSLPFDVQLELIHSLRGLENAHIMRPGYAIEYDYFDPRGLKSTLETKAIGGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+A S D R ++Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGINAALLSLGRDQWTPRRDEAYLGVLVDDLVTRGVTEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F + LKS + Sbjct: 427 YRMFTSRAEYRLSLREDNADLRLTEIGRQLGIVDDARWDAFNRKRDAVAAEVERLKSSWV 486 Query: 484 TSKNLS---STSISFKQDGKTRTAYEFLSYPDFSIQNLFS--------ICPDARKFSSLV 532 + L + + K + + + L P+ S + L + + ++ Sbjct: 487 NPRILPLEVAEPLLGKAIEREYSLADLLKRPNVSYEALMAARNADGSLLAGPGVVGDDVL 546 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 E+++I+ YA Y RQ E ++ E + IP D DY ++ +LS E+++KL +P + Sbjct: 547 AEQVEIQVKYAGYIARQQDEVQKQISHELQPIPADVDYDAVTSLSFEVRQKLKTHRPETV 606 Query: 593 LQASKIEGMTPAALNLLLIYIKK 615 QA++I G+TPAA++LLLI++K+ Sbjct: 607 GQAARISGVTPAAISLLLIHLKR 629 >gi|170729227|ref|YP_001763253.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shewanella woodyi ATCC 51908] gi|205831557|sp|B1KQ45|MNMG_SHEWM RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|169814574|gb|ACA89158.1| glucose inhibited division protein A [Shewanella woodyi ATCC 51908] Length = 630 Score = 542 bits (1397), Expect = e-152, Method: Compositional matrix adjust. Identities = 294/620 (47%), Positives = 387/620 (62%), Gaps = 15/620 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G+ T L+TH T+G MSCNPAIGG+GKGHLV+EIDAL Sbjct: 7 FDVIVIGGGHAGTEAALAAARMGSKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D AGIQFR LN KGPAVR R QADR LYR +Q + +Q NL + Q V Sbjct: 67 GGAMAIATDYAGIQFRTLNSSKGPAVRATRAQADRALYRAKIQEILQNQPNLRLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E ++ +V Q VVLT GTFL G IHIG GR GD PS +L + Sbjct: 127 DLIVENGRVTGVVTQMGLAFEAPAVVLTAGTFLSGKIHIGMQNYSGGRAGDPPSIALADR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D TI +D +Q D L SF+ D + +QI C +T Sbjct: 187 LRELPIRIGRLKTGTPPRIDANTINFDLMTEQKGDTPLPVMSFIGDVSQHPKQISCFVTH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH II + S +YSG I+ GPRYCPSIEDKI RF +++ HQIF+EPEGLNT+ Sbjct: 247 TNEKTHDIIRGGLDRSPMYSGVIEGVGPRYCPSIEDKIHRFADKSSHQIFIEPEGLNTNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q +R+I G+E IIRPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 IYPNGISTSLPFDVQLNLVRSIKGMENAEIIRPGYAIEYDYFDPRDLKNSLETKSIDGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG+N++ + + C R ++Y+GV++DDL++ G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGMNASLQVQGKEIWCPRRDEAYLGVLVDDLSTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNF-LRSLLKSLVL 483 RMFTSRAEYR+ LR DNAD RLT G ++G + + R +F++ + L+ L V Sbjct: 427 RMFTSRAEYRLLLREDNADLRLTEKGREIGLVDDERWAKFSEKRESIELELQRLRSQWVH 486 Query: 484 TSKNL-------SSTSISFKQDGKTRTAYEFLSYPDF-SIQNLFSICPDARKFSSLVIER 535 + L +T IS + + + YP S++ D R E+ Sbjct: 487 PNSPLIDVLNPELNTPISREASFEDLLRRPEMDYPKLMSLEGFGPGLDDPR-----AAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 +QI+ Y+ Y RQ E + E +P D DY +P LSNE+ KL+ KP + QA Sbjct: 542 VQIQVKYSGYIQRQQDEIDKAIRHETTGLPLDLDYQEVPGLSNEVIAKLNDHKPETIGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I GMTPAA+++LL+++K+ Sbjct: 602 SRISGMTPAAISILLVHLKR 621 >gi|229000272|ref|ZP_04159841.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus mycoides Rock3-17] gi|228759604|gb|EEM08581.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus mycoides Rock3-17] Length = 629 Score = 542 bits (1397), Expect = e-152, Method: Compositional matrix adjust. Identities = 281/619 (45%), Positives = 394/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLRQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ ++ Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEDDVCKGVITQSGAEYTAETVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q DE+ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDEKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I N+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSEETHRLIDRNLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q + ++TIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQREMLKTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QG++AGIN+A +S + R+D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGIMAGINAACRSLGKKEVILGRSDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT IG ++G I E R RF ++ + L+S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEIGQEIGLIPEERYGRFTVKKEQIEQEKLRLESIIIK 486 Query: 485 SKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + S S +DG A + L P+ + +++ + P + + E+++I+ Sbjct: 487 PRPEVQELIRSVGGSELKDGI--RASDLLRRPEMTYEHIRILAPSEVEIHDEIAEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + + +K E + IP D DY ++ +++E ++KL ++P ++ QAS+I Sbjct: 545 IKYEGYIEKSLQQVERMKKMESKKIPVDIDYDAISGIASEARQKLKDVRPLSMGQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 605 GVNPADISILLVYIEQGKI 623 >gi|114565206|ref|YP_752720.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shewanella frigidimarina NCIMB 400] gi|122298231|sp|Q07VT3|MNMG_SHEFN RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|114336499|gb|ABI73881.1| glucose inhibited division protein A [Shewanella frigidimarina NCIMB 400] Length = 629 Score = 542 bits (1397), Expect = e-152, Method: Compositional matrix adjust. Identities = 289/615 (46%), Positives = 384/615 (62%), Gaps = 5/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA++G+ T L+TH T+G MSCNPAIGG+GKGHLV+EIDAL Sbjct: 7 FDVIVVGGGHAGTEAALAAARMGSKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D AGIQFR LN KGPAVR R QADR LYR +Q + +Q NL + Q V Sbjct: 67 GGAMATATDFAGIQFRTLNSSKGPAVRATRAQADRALYRQKIQHILQNQPNLRIFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + +V Q +VLTTGTFL G IHIG GR GD P+ +L N Sbjct: 127 DLVVENDKVIGVVTQMGLAFEAPAIVLTTGTFLSGKIHIGMQNYSGGRAGDPPAIALANR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + + GRLKTGTP R+D TI + + +Q D L SF+ D + RQ+ C IT Sbjct: 187 LRELNIRVGRLKTGTPPRIDANTIDFTQMTEQKGDTPLPVMSFIGDVSQHPRQVSCFITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH II + S +YSG I+ GPRYCPSIEDKI RF +++ HQIF+EPEGL+T+ Sbjct: 247 TNEKTHDIIRGGLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKSSHQIFIEPEGLSTNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q +R+I G+E I+RPGYAIEYDY +P++L +LETK I GL+ Sbjct: 307 IYPNGISTSLPFDVQLNLVRSIKGMENAEIMRPGYAIEYDYFDPRDLKNSLETKAIEGLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG+N++ + C R ++Y+GV++DDL++ G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGMNASLQVQGKTAWCPRRDEAYLGVLVDDLSTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL- 483 RMFTSRAEYR+ LR DNAD RLT G +LG + ++R + F + L+S + Sbjct: 427 RMFTSRAEYRLLLREDNADLRLTEKGRELGLVDDKRWESFIAKRESIELELQRLRSQWVH 486 Query: 484 -TSKNLSSTSISFKQDGKTRTAYE-FLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 S L + ++E L P+ L S+ E++QI+ Sbjct: 487 PNSALLGVLNPELNTPISREASFEDLLRRPEMDYAKLMSLEGFGPGLDDQQAAEQVQIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y+ Y RQ E + E L+P D DY +P LSNE+ KL+ KP + QAS+I G Sbjct: 547 KYSGYIQRQQDEIDKAIRHENSLLPLDLDYQEVPGLSNEVIAKLNNHKPDTVGQASRISG 606 Query: 601 MTPAALNLLLIYIKK 615 +TPAA+++LL+++KK Sbjct: 607 ITPAAISILLVHLKK 621 >gi|85375438|ref|YP_459500.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Erythrobacter litoralis HTCC2594] gi|122543371|sp|Q2N6I8|MNMG_ERYLH RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|84788521|gb|ABC64703.1| glucose inhibited division protein A [Erythrobacter litoralis HTCC2594] Length = 621 Score = 542 bits (1396), Expect = e-152, Method: Compositional matrix adjust. Identities = 280/610 (45%), Positives = 393/610 (64%), Gaps = 2/610 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D++V+GGGHAG EAA AA++G TAL++ + IG+MSCNPAIGGLGKGHLVRE+DA Sbjct: 8 FDILVVGGGHAGVEAACAAARMGVRTALVSFDPARIGAMSCNPAIGGLGKGHLVREVDAF 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DG++ R ADAA I +R+LN KG AV GPR QADR+L+ A+Q + +QENL V+ GEVA Sbjct: 68 DGVIARAADAAAIHYRMLNRSKGSAVWGPRVQADRKLFHAAVQAIVATQENLTVVPGEVA 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E ++ I + D + + V+L TGTFL G ++ G+ + GR+G+ ++ L Sbjct: 128 ALRFEGARVTGIELADGTALSGQAVILCTGTFLGGKLYRGEEIMVGGRIGEDSASRLAEQ 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + RLKTGTP RLDG+TI W E+Q +D S +T +N +I CGITRT Sbjct: 188 MYGLELPMARLKTGTPPRLDGRTIDWAALEEQPSDGEDWTLSALTPARSNPEIFCGITRT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N H II N+ S ++SG I + GPRYCPSIEDKI RFG+R+GHQ+FLEPEGL+T +V Sbjct: 248 NARAHDIIRANLNRSPLFSGAIDAQGPRYCPSIEDKIHRFGDRDGHQVFLEPEGLDTHLV 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YPNGIST+LP ++Q +R + GL V ++ PGYA+EYD+I P+ L L K + GL+ Sbjct: 308 YPNGISTSLPVDVQLGMLRAMDGLFHVELVEPGYAVEYDHIEPRALTSGLRLKDVEGLYC 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAAAQGL+AG+N+A + R SY+ VM+DDLT GV EPYR Sbjct: 368 AGQINGTTGYEEAAAQGLIAGLNAACVVLDREAPALDRATSYMAVMVDDLTLHGVSEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 M T+RAEYR+ LR +NA RLTP+ ++LGC+G R + FA+ ++ L + L S ++ Sbjct: 428 MLTARAEYRLRLRANNATARLTPLAIELGCVGGERAEWFARREEKRARLDAALDSQA-SA 486 Query: 486 KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAY 545 K + + K D E+L +P +L + P+ + + L +++YA Y Sbjct: 487 KQMQDLGLPVKSDSGKMALREWLRFPTIDFPDLAPLVPEV-DTGTELAAELAEDAAYAPY 545 Query: 546 TGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAA 605 RQ E +E+K E + DF ++ +P LS+E+ E+L+ +P L A ++ G+TPAA Sbjct: 546 LARQDAELRELKANEAITLAADFPFAEVPGLSSEMVERLTAARPETLAAAGRVPGVTPAA 605 Query: 606 LNLLLIYIKK 615 L +L++ +K Sbjct: 606 LAAVLVHTRK 615 >gi|45659306|ref|YP_003392.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|59797795|sp|Q72LR0|MNMG_LEPIC RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|45602552|gb|AAS72029.1| glucose inhibited division protein A [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 635 Score = 542 bits (1396), Expect = e-152, Method: Compositional matrix adjust. Identities = 280/622 (45%), Positives = 388/622 (62%), Gaps = 23/622 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D +V+G GHAG EAA +++K GA T LIT TIG MSCNPAIGG+ KGH+VRE+DAL Sbjct: 14 FDCVVVGAGHAGSEAAYISSKGGARTLLITMNLDTIGQMSCNPAIGGIAKGHMVREVDAL 73 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+MG++ D GIQF++LN KGP+V PR QA+++ Y+L ++ + +++NL + Q V Sbjct: 74 GGIMGKMIDNTGIQFKMLNTSKGPSVWAPRAQAEKKEYQLKVKHTLEAEKNLSIRQDTVE 133 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + I + V+LTTGTFL ++HIG + GRM + L S Sbjct: 134 ELIIENDQVIGVRTGRGFEIFTNHVILTTGTFLSSLVHIGTYQNENGRMCEPTVKGLSKS 193 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 K++ GRLKTGTP R+ ++ Q D PFSF TDKIT +QI C IT T Sbjct: 194 LAKYNLKLGRLKTGTPPRIHKNSVDLSVLTIQEGDSNPSPFSFSTDKITRKQIPCFITYT 253 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N ETH++I EN+ S +YSG I+S GPRYCPSIEDK+VRF +R HQ+FLEPEG T + Sbjct: 254 NAETHKLIHENLNLSPMYSGQIQSTGPRYCPSIEDKVVRFADRERHQVFLEPEGYETSEI 313 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG+ST+LPEE+Q + +R++ GLE I+RPGYAIEYDY++P EL PTLETKKI GL+ Sbjct: 314 YLNGVSTSLPEEVQWKLVRSLKGLENAEIVRPGYAIEYDYVDPTELKPTLETKKIKGLYH 373 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAAAQGLVA + L + F R++SYIGV+IDDL KGV +PYR Sbjct: 374 AGQINGTTGYEEAAAQGLVAAYSVLHSLRNLTPLLFKRSESYIGVLIDDLVHKGVEDPYR 433 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL---- 481 MFTSRAE+R+ LR DNAD RL G LG + ++ + + N +R + + Sbjct: 434 MFTSRAEHRLLLRQDNADQRLMKYGYDLGLVDQKSYDCMKEKYERVNSVREKIYQIPLKP 493 Query: 482 ------VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIER 535 +L K +++ K D FL P+ I+++ + P+ +S L Sbjct: 494 SDKFQNLLDQKGITNYKFGMKLDS-------FLKRPEIKIKDIEFMIPEVSSWSDLEKSI 546 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRL---IPKDFDYSSLPALSNELKEKLSILKPFNL 592 L++E Y Y R++ + I+++ K L IP+D +Y + L E +KL KP L Sbjct: 547 LEMEIKYEGYIKREL---ETIQWKNKYLDLAIPEDINYEMIAGLKKEAIQKLKSHKPMTL 603 Query: 593 LQASKIEGMTPAALNLLLIYIK 614 +AS+I G+ P+ ++L+L +IK Sbjct: 604 EKASQISGVDPSDVDLILYHIK 625 >gi|255319490|ref|ZP_05360704.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Acinetobacter radioresistens SK82] gi|262378486|ref|ZP_06071643.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Acinetobacter radioresistens SH164] gi|255303430|gb|EET82633.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Acinetobacter radioresistens SK82] gi|262299771|gb|EEY87683.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Acinetobacter radioresistens SH164] Length = 626 Score = 542 bits (1396), Expect = e-152, Method: Compositional matrix adjust. Identities = 289/617 (46%), Positives = 392/617 (63%), Gaps = 6/617 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GK HLVREID Sbjct: 5 KVYDVIVIGGGHAGTEAALAAARMGRQTLLLTHNIETLGQMSCNPAIGGIGKSHLVREID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M AD GIQFR+LN +KG AVR R QADR LY+ A++ + +Q NLD+ Q Sbjct: 65 ALGGAMALAADKGGIQFRILNSRKGAAVRATRAQADRILYKAAIRNVLENQTNLDIFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 E + + +V Q TVVLTTGTFL GVIH+G K GR GD PS SL Sbjct: 125 ADDLIVEGDTVKGVVTQMGIRFDTKTVVLTTGTFLGGVIHVGLEKSSGGRAGDPPSISLA 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + + GRLKTGTP R+D +++ + Q D SFM D + Q+ C I Sbjct: 185 HRLRELKLPVGRLKTGTPPRIDARSVDFSVMTPQPGDFPSPTMSFMGDASMHPEQVNCYI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II + S +Y+G I+ GPRYCPSIEDKI RF +++ HQ+FLEPEGL+T Sbjct: 245 THTNEKTHEIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFADKDSHQVFLEPEGLDT 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNGIST+LP ++Q + +R+I G+E +I+RPGYAIEYDY NP+ L TLETK I+ Sbjct: 305 HELYPNGISTSLPFDVQFELVRSIRGMENAHILRPGYAIEYDYFNPQALKFTLETKAINN 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQINGTTGYEEA AQGL+AG+N+AR++ + + R +YIGV++DDL + G E Sbjct: 365 LYFAGQINGTTGYEEAGAQGLLAGLNAARRAWEQEEWTPKRDQAYIGVLVDDLITLGTKE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLTP+G ++G + + R + + ++ S L+ L Sbjct: 425 PYRMFTSRAEYRLMLREDNADQRLTPVGREMGLVDDVRWAAYCEKMEAVERETSRLQHLW 484 Query: 483 LTSKNLSS---TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 N ++ + K +A + L P+ + + + + + + V ++++I Sbjct: 485 AAPNNPMGKKFVEMTGQDLSKESSAIDLLKRPNVTFEQIAELTDS--EVTQQVGDQIEIA 542 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 YA Y RQ + ++K E+ IP DF+Y + LS E+ +KL + P L QAS+I Sbjct: 543 VKYAGYINRQHEDVAQMKRLEETRIPADFNYDVVSGLSREITQKLKTVLPETLAQASRIP 602 Query: 600 GMTPAALNLLLIYIKKN 616 G+TPAA+ L++I I+KN Sbjct: 603 GVTPAAVQLIMITIRKN 619 >gi|167587941|ref|ZP_02380329.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia ubonensis Bu] Length = 656 Score = 542 bits (1396), Expect = e-152, Method: Compositional matrix adjust. Identities = 287/625 (45%), Positives = 388/625 (62%), Gaps = 15/625 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++G T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALASARMGVKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D +GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 67 GGAMAAATDESGIQFRILNSSKGPAVRATRAQADRILYKAAIRHRLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IH+G GR GD + +L + Sbjct: 127 DLMVEGDRVVGAVTQIGIRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVTLSSR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQIECGIT 243 + GRLKTGTP R+DG+TI + K E+Q D IP FSF+ + +Q+ C +T Sbjct: 187 LKELKLPQGRLKTGTPPRIDGRTIDFSKLEEQPGDLDPIPVFSFLGRAEQHPQQLPCWVT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPEGL T+ Sbjct: 247 HTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPEGLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP ++Q + + ++ GLE+ +I+RPGYAIEYDY +P+ L +LETK I+GL Sbjct: 307 EFYPNGISTSLPFDVQLELVHSMRGLEQAHILRPGYAIEYDYFDPRALKASLETKAINGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+ + D C R +Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGVNAGLYVQEKDAWCPRRDQAYLGVLVDDLVTRGVAEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F + + LKS + Sbjct: 427 YRMFTSRAEYRLSLREDNADMRLTEIGRELGLVDDVRWDAFCRKRDAVSRETERLKSTWV 486 Query: 484 TSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----CPDARKFSS------ 530 T K L +T++ K + E L P S + + C A + Sbjct: 487 TPKTLPADEATALLGKAIDHEYSLAELLRRPGVSYDGVCGLKGGECGPAEPLADDPVLLE 546 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 + E+++I Y Y RQ E + E +P+ DY + LS E+ +KL+ +P Sbjct: 547 QIKEQVEIGIKYQGYIERQANEIERNDANENTRLPEGIDYREVRGLSFEVSQKLNQFRPE 606 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 + QAS+I G+TPAA++LL++++K+ Sbjct: 607 TIGQASRISGVTPAAISLLMVHLKR 631 >gi|152977682|ref|YP_001377199.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|189039328|sp|A7GVP6|MNMG_BACCN RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|152026434|gb|ABS24204.1| glucose inhibited division protein A [Bacillus cytotoxicus NVH 391-98] Length = 629 Score = 542 bits (1396), Expect = e-152, Method: Compositional matrix adjust. Identities = 279/619 (45%), Positives = 399/619 (64%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ LY+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFLYQHELKKTIEETPNLTLRQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEDGVCKGVITQSGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F+ R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFELVRFKTGTPPRVNSNTIDYSKTEIQPGDDQPRAFSFETTKFILDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I +N+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSEETHRLIDKNLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q + ++TIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQREMLKTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QG++AGIN+A +S + R+D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGIMAGINAACRSLGKKEVILGRSDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT IG ++G I E R +R+++ ++ ++ L+ +++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEIGHEIGLIPEERYERYSQKKEQIEQEKARLEGIIIK 486 Query: 485 SKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + S S +DG A + L P+ + +++ + P + + V E+++I+ Sbjct: 487 PRPEVQELIRSVGGSELKDGI--RASDLLRRPEMTYEHIRLLAPSELEINDEVAEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + + +K E + IP D DY ++ +++E ++KL ++P ++ QAS+I Sbjct: 545 IKYEGYIEKSLQQVERMKKMESKKIPVDIDYDAISGIASEARQKLKEVRPLSVGQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 605 GVNPADISILLVYIEQGKI 623 >gi|78064752|ref|YP_367521.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia sp. 383] gi|123569642|sp|Q39KY9|MNMG_BURS3 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|77965497|gb|ABB06877.1| Glucose-inhibited division protein A subfamily [Burkholderia sp. 383] Length = 656 Score = 542 bits (1396), Expect = e-152, Method: Compositional matrix adjust. Identities = 286/625 (45%), Positives = 388/625 (62%), Gaps = 15/625 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D +GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 67 GGAMAAATDESGIQFRILNSSKGPAVRATRAQADRILYKAAIRHRLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IH+G GR GD + SL + Sbjct: 127 DLMVEGDRVVGAVTQIGIRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSSR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQIECGIT 243 + GRLKTGTP R+DG++I + + +Q D +P FSF+ + +Q+ C +T Sbjct: 187 LKELKLPQGRLKTGTPPRIDGRSIDFSQLTEQPGDLDPVPVFSFLGRAEQHPQQLPCWVT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPEGL T+ Sbjct: 247 HTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPEGLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP ++Q + + ++ GLE +I+RPGYAIEYDY +P+ L +LETK I+GL Sbjct: 307 EFYPNGISTSLPFDVQLELVHSMRGLENAHILRPGYAIEYDYFDPRALKASLETKAINGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+ R + D C R +Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGLNAGRYVQEKDAWCPRRDQAYLGVLVDDLVTRGVAEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F++ + LKS + Sbjct: 427 YRMFTSRAEYRLSLREDNADMRLTEIGRELGLVDDTRWDAFSRKRDAVSRETERLKSTWV 486 Query: 484 TSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----CPDARKFSS------ 530 T K L +T++ K + E L P S + + C A + Sbjct: 487 TPKTLPPEEATALLGKAIDHEYSLAELLRRPGISYDGVCGLKGGECGPAEPLADDPVLLE 546 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 + E+++I Y Y RQ E + E +P DY + LS E+ +KL+ +P Sbjct: 547 QIKEQVEIGIKYQGYIERQASEIERNDANENTRLPDGIDYREVRGLSFEVSQKLNEFRPE 606 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 + QAS+I G+TPAA++LL++++K+ Sbjct: 607 TIGQASRISGVTPAAISLLMVHLKR 631 >gi|91785986|ref|YP_546938.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Polaromonas sp. JS666] gi|123165597|sp|Q12HF2|MNMG_POLSJ RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|91695211|gb|ABE42040.1| glucose inhibited division protein A [Polaromonas sp. JS666] Length = 673 Score = 542 bits (1396), Expect = e-152, Method: Compositional matrix adjust. Identities = 291/648 (44%), Positives = 391/648 (60%), Gaps = 32/648 (4%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DVIV+GGGHAG EAA +A++G T L++H T+G MSCNP+IGG+GKGHLV+E+D Sbjct: 9 QEFDVIVVGGGHAGTEAALASARMGCKTLLLSHNIETLGQMSCNPSIGGIGKGHLVKEVD 68 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 A+ G M D GIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q Sbjct: 69 AMGGAMALATDEGGIQFRILNSSKGPAVRATRAQADRILYKAAIRRRLENQPNLWLFQQA 128 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + + V Q R TVVLT GTFL G IH+G AGR GD P+ SL Sbjct: 129 VDDLMVEGDRVVGAVTQVGIRFRSRTVVLTAGTFLDGKIHVGLNNYAAGRAGDPPAVSLS 188 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFAD------ERLIP-FSFMTDKITN- 235 + + GRLKTGTP R+DG+TI + K +Q D +P FSFM I + Sbjct: 189 SRLKELKLPQGRLKTGTPPRIDGRTIDFSKCIEQPGDGMPGGTAGPVPVFSFMGGAIPHP 248 Query: 236 RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFL 295 +Q+ C IT TN TH II S +++G I GPRYCPS+EDKI RF ++ HQIFL Sbjct: 249 QQMPCWITHTNERTHEIIRSGFDRSPMFTGKIDGVGPRYCPSVEDKINRFADKESHQIFL 308 Query: 296 EPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTL 355 EPEGL T +YPNGIST+LP +IQ++ +R++ G+E +I+RPGYAIEYDY +P+ L T Sbjct: 309 EPEGLTTHEIYPNGISTSLPFDIQYELVRSMAGMENAHILRPGYAIEYDYFDPRALKTTF 368 Query: 356 ETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCI--------CFSRTDSY 407 ET+ I GLF AGQINGTTGYEEAAAQG+ AGIN+A + L + R ++Y Sbjct: 369 ETRAIGGLFFAGQINGTTGYEEAAAQGMFAGINAALQCRALGGLPNDHGGAWLPRRDEAY 428 Query: 408 IGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKY 467 +GV++DDL +KGV EPYRMFTSRAEYR+ LR DNAD RLT G +LG + + R F++ Sbjct: 429 LGVLVDDLITKGVTEPYRMFTSRAEYRLMLREDNADMRLTEKGRELGLVDDARWDAFSRK 488 Query: 468 IQEYNFLRSLLKSLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI--- 521 + L+SL + NL + + K + + L PD + L S+ Sbjct: 489 RDAVSRETERLRSLWVNPHNLPLAEAERVLGKSIEREYNLLDLLRRPDVNYAGLMSLEEG 548 Query: 522 ----------CPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYS 571 + + VIE+++I + YA Y Q E + E +P D DY Sbjct: 549 KYANPELAAEAAASDDLAKSVIEQIEITAKYAGYIDLQKTEVERAAHYENLKLPTDLDYL 608 Query: 572 SLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 + ALS E ++ L+ +P L AS+I G+TPA ++LLL+++KKN K Sbjct: 609 QVSALSFEARQTLARHRPETLGMASRISGITPATVSLLLVHLKKNLWK 656 >gi|57651105|ref|YP_187523.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus COL] gi|151222823|ref|YP_001333645.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus str. Newman] gi|161353516|ref|YP_501497.2| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus NCTC 8325] gi|161510920|ref|YP_001576579.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|162138569|ref|YP_495279.2| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|258451370|ref|ZP_05699401.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Staphylococcus aureus A5948] gi|262049466|ref|ZP_06022338.1| glucose-inhibited division protein A [Staphylococcus aureus D30] gi|262051897|ref|ZP_06024112.1| glucose-inhibited division protein A [Staphylococcus aureus 930918-3] gi|282920716|ref|ZP_06328435.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus A9765] gi|284023034|ref|ZP_06377432.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus 132] gi|294849825|ref|ZP_06790565.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus A9754] gi|71152073|sp|Q5HCI4|MNMG_STAAC RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|172049080|sp|A6QKK1|MNMG_STAAE RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|189039363|sp|A8YYS0|MNMG_STAAT RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|205831559|sp|Q2FDE9|MNMG_STAA3 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|205831560|sp|Q2FUQ3|MNMG_STAA8 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|57285291|gb|AAW37385.1| glucose inhibited division protein A [Staphylococcus aureus subsp. aureus COL] gi|150375623|dbj|BAF68883.1| glucose-inhibited division protein A [Staphylococcus aureus subsp. aureus str. Newman] gi|160369729|gb|ABX30700.1| glucose inhibited division protein A [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|257860900|gb|EEV83717.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Staphylococcus aureus A5948] gi|259160224|gb|EEW45253.1| glucose-inhibited division protein A [Staphylococcus aureus 930918-3] gi|259162463|gb|EEW47033.1| glucose-inhibited division protein A [Staphylococcus aureus D30] gi|282594124|gb|EFB99112.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus A9765] gi|294823373|gb|EFG39802.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus A9754] gi|315197915|gb|EFU28248.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus CGS01] gi|320141414|gb|EFW33257.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus MRSA131] gi|320144397|gb|EFW36162.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus MRSA177] gi|329731594|gb|EGG67954.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus 21189] Length = 625 Score = 542 bits (1396), Expect = e-152, Method: Compositional matrix adjust. Identities = 285/621 (45%), Positives = 396/621 (63%), Gaps = 7/621 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VREID Sbjct: 3 QEYDVIVIGAGHAGVEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVREID 62 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R I +ENL ++QG Sbjct: 63 ALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEENLHIMQGM 122 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E N + + + V++TTGTFLRG I +G +K +G PS +L Sbjct: 123 VDELIIEDNEVKGVRTNIGTEYLSKAVIITTGTFLRGEIILGNMKYSSGPNHQLPSITLS 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 ++ + FD R KTGTP R++ KTI + KTE Q D+ FSF T + Q+ C +T Sbjct: 183 DNLRELGFDIVRFKTGTPPRVNSKTIDYSKTEIQPGDDVGRAFSFETTEYILDQLPCWLT 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN ETH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG NT+ Sbjct: 243 YTNAETHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRNTN 302 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETK I L Sbjct: 303 EVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKMIKNL 362 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGT+GYEEAA QGL+AGIN+A K SR+D+YIGV+IDDL +KG EP Sbjct: 363 YTAGQINGTSGYEEAAGQGLMAGINAAGKVLNTGEKILSRSDAYIGVLIDDLVTKGTNEP 422 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G +LG I E R RF + Q+ + L + + Sbjct: 423 YRLLTSRAEYRLLLRHDNADLRLTDMGYELGMISEERYARFNEKRQQIDAEIKRLSDIRI 482 Query: 484 TSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 K T +Q G +R A + L P+ + + + + + ++ V E+++I Sbjct: 483 --KPNEHTQAIIEQHGGSRLKDGILAIDLLRRPEMTYDIILELLEEEHQLNADVEEQVEI 540 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 ++ Y Y + + + +++K E++ IP+D DYS + +L+ E +EKLS +KP N+ QAS+I Sbjct: 541 QTKYEGYINKSLQQVEKVKRMEEKKIPEDLDYSKIDSLATEAREKLSEVKPLNIAQASRI 600 Query: 599 EGMTPAALNLLLIYIKKNTVK 619 G+ PA +++LLIY+++ ++ Sbjct: 601 SGVNPADISILLIYLEQGKLQ 621 >gi|24217058|ref|NP_714539.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Leptospira interrogans serovar Lai str. 56601] gi|59797872|sp|Q8EY59|MNMG_LEPIN RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|24198471|gb|AAN51557.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Leptospira interrogans serovar Lai str. 56601] Length = 635 Score = 542 bits (1396), Expect = e-152, Method: Compositional matrix adjust. Identities = 280/622 (45%), Positives = 387/622 (62%), Gaps = 23/622 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D +V+G GHAG EAA +++K GA T LIT TIG MSCNPAIGG+ KGH+VRE+DAL Sbjct: 14 FDCVVVGAGHAGSEAAYISSKGGARTLLITMNLDTIGQMSCNPAIGGIAKGHMVREVDAL 73 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+MG++ D GIQF++LN KGP+V PR QA+++ Y+L ++ + +++NL + Q V Sbjct: 74 GGIMGKMIDNTGIQFKMLNTSKGPSVWAPRAQAEKKEYQLKVKHTLEAEKNLSIRQDTVE 133 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + I V+LTTGTFL ++HIG + GRM + L S Sbjct: 134 ELIIENDQVIGVRTGRGFEIFTDHVILTTGTFLSSLVHIGTYQNENGRMCEPTVKGLSKS 193 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 K++ GRLKTGTP R+ ++ Q D PFSF TDKIT +QI C IT T Sbjct: 194 LAKYNLKLGRLKTGTPPRIHKNSVDLSVLTIQEGDSNPSPFSFSTDKITRKQIPCFITYT 253 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N ETH++I EN+ S +YSG I+S GPRYCPSIEDK+VRF +R HQ+FLEPEG T + Sbjct: 254 NAETHKLIHENLNLSPMYSGQIQSTGPRYCPSIEDKVVRFADRERHQVFLEPEGYETSEI 313 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG+ST+LPEE+Q + +R++ GLE I+RPGYAIEYDY++P EL PTLETKKI GL+ Sbjct: 314 YLNGVSTSLPEEVQWKLVRSLKGLENAEIVRPGYAIEYDYVDPTELKPTLETKKIKGLYH 373 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAAAQGLVA + L + F R++SYIGV+IDDL KGV +PYR Sbjct: 374 AGQINGTTGYEEAAAQGLVAAYSVLHSLRNLTPLLFKRSESYIGVLIDDLVHKGVEDPYR 433 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL---- 481 MFTSRAE+R+ LR DNAD RL G LG + ++ + + N +R + + Sbjct: 434 MFTSRAEHRLLLRQDNADQRLMKYGYDLGLVDQKSYDCMKEKYERVNSVREKIYQIPLKP 493 Query: 482 ------VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIER 535 +L K +++ K D FL P+ I+++ + P+ +S L Sbjct: 494 SDKFQNLLDQKGITNYKFGMKLDS-------FLKRPEIKIKDIEFMIPEVSSWSDLEKSI 546 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRL---IPKDFDYSSLPALSNELKEKLSILKPFNL 592 L++E Y Y R++ + I+++ K L IP+D +Y + L E +KL KP L Sbjct: 547 LEMEIKYEGYIKREL---ETIQWKNKYLDLAIPEDINYEMIAGLKKEAIQKLKSHKPMTL 603 Query: 593 LQASKIEGMTPAALNLLLIYIK 614 +AS+I G+ P+ ++L+L +IK Sbjct: 604 EKASQISGVDPSDVDLILYHIK 625 >gi|228994202|ref|ZP_04154102.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus pseudomycoides DSM 12442] gi|228765654|gb|EEM14308.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus pseudomycoides DSM 12442] Length = 629 Score = 542 bits (1396), Expect = e-152, Method: Compositional matrix adjust. Identities = 281/619 (45%), Positives = 394/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLRQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ ++ Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEDDVCKGVITQSGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q DE+ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDEKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I N+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSEETHRLIDRNLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q + ++TIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQREMLKTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QG++AGIN+A +S + R+D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGIMAGINAACRSLGKKEVILGRSDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT IG ++G I E R RF ++ + L+S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEIGQEIGLIPEERYGRFTVKKEQIEQEKLRLESIIIK 486 Query: 485 SKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + S S +DG A + L P+ + +++ + P + + E+++I+ Sbjct: 487 PRPEVQELIRSVGGSELKDGI--RASDLLRRPEMTYEHIRILAPSEVEIHDEIAEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + + +K E + IP D DY ++ +++E ++KL ++P ++ QAS+I Sbjct: 545 IKYEGYIEKSLQQVERMKKMESKKIPVDIDYDAISGIASEARQKLKDVRPLSMGQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 605 GVNPADISILLVYIEQGKI 623 >gi|190569302|ref|ZP_03022196.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis Tsiankovskii-I] gi|190559609|gb|EDV13600.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis Tsiankovskii-I] Length = 629 Score = 542 bits (1396), Expect = e-152, Method: Compositional matrix adjust. Identities = 283/622 (45%), Positives = 392/622 (63%), Gaps = 13/622 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGP VR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPTVRALRAQADKFSYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEDGECKGVITQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVILGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G ++G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEVGHEIGLITEERYERFTNKKLQIEQEKERLSSIIIK 486 Query: 485 S--------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 +N+ + + +DG A + L P+ + +++ + P + S V E++ Sbjct: 487 PRPEVQELIRNIGGSEL---KDGI--RASDLLRRPEMTYEHIHLLVPSEVELSDEVKEQV 541 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS Sbjct: 542 EIQIKYEGYIEKSLQQVERMKKMENKKIPVDIDYDAISSLASEARQKLKDVRPLSMGQAS 601 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+ PA +++LL+YI++ + Sbjct: 602 RISGVNPADISILLVYIEQGKI 623 >gi|237756701|ref|ZP_04585204.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Sulfurihydrogenibium yellowstonense SS-5] gi|237691140|gb|EEP60245.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Sulfurihydrogenibium yellowstonense SS-5] Length = 620 Score = 541 bits (1395), Expect = e-152, Method: Compositional matrix adjust. Identities = 294/624 (47%), Positives = 389/624 (62%), Gaps = 30/624 (4%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDV+VIGGGHAG E A +AKLGA TALIT IG M CNP+IGG+ KG +VRE+DA Sbjct: 6 EYDVVVIGGGHAGIETALASAKLGAKTALITIDKEKIGLMPCNPSIGGIAKGIVVREVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M + D GIQF+VLN +KGPAVR PR QAD+E YR M + + ENL VI+ EV Sbjct: 66 LGGEMAKAIDQTGIQFKVLNTRKGPAVRSPRAQADKEEYRRYMVNKTNNTENLTVIEDEV 125 Query: 125 AG--FNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 KN + ++ I+ VV+TTGTFL G+IHIG + PAGRM + PS L Sbjct: 126 IDIVLKENKNEVDGVITDKGLKIKTKAVVVTTGTFLNGLIHIGDKRFPAGRMEEKPSTKL 185 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI------TNR 236 + + F+ R KTGTPARLD TI + E+ D FSF T+ Sbjct: 186 PEFYKRAGFELFRFKTGTPARLDKNTINFSILEEAPGDNPPPKFSFWTEPKGSYWFKEKD 245 Query: 237 QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLE 296 QI C IT T ETHRII EN+ +A+Y G I GPRYCPSIEDKIV+F ++ H ++LE Sbjct: 246 QIPCYITYTTPETHRIIKENLHRTALYGGAITGIGPRYCPSIEDKIVKFEGKDRHTVWLE 305 Query: 297 PEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLE 356 PE + +YPNG+ST+LPEEIQ Q R+IPGLE V +++P YAIEYD + P EL+PTLE Sbjct: 306 PETRDGISIYPNGLSTSLPEEIQWQMYRSIPGLENVVLLKPAYAIEYDIVMPTELYPTLE 365 Query: 357 TKKISGLFLAGQINGTTGYEEAAAQGLVAGINSA-RKSNKLDCICFSRTDSYIGVMIDDL 415 TK+I GL+ AG NGTTGYEEAA QG+VAGIN+A R K + R ++YIGVMIDDL Sbjct: 366 TKRIRGLYHAGNFNGTTGYEEAAGQGIVAGINAALRALGKNEPFIIKRDEAYIGVMIDDL 425 Query: 416 TSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLR 475 T+KGV+EPYR+FTSR+EYR+ LR DNA RL +G + E +EY F++ Sbjct: 426 TTKGVIEPYRLFTSRSEYRLHLRQDNAILRLYQKAYNIGMLNE----------EEYKFVK 475 Query: 476 SLLKSLVLTSKNLSSTSISFKQDGKTRTA-YEFLSYPDFSIQNLFSI---CPDARKFSSL 531 + + +++ +F +DG + + + +L P+ IQ L I P+ S Sbjct: 476 ETEEEI---RNWINTYKETFIKDGDKKVSIFTYLQKPEVDIQKLKEIGIAVPE----SDY 528 Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 + E ++I Y Y R+ +++K+ E IP+D DYS + L E+ +KL+ KP Sbjct: 529 IQEEIEINVKYDGYLEREEKLNEKMKYLEGIKIPEDIDYSQVAGLRKEIVQKLTKFKPMT 588 Query: 592 LLQASKIEGMTPAALNLLLIYIKK 615 L QAS++EG+TPAA+ LL++I+K Sbjct: 589 LGQASRLEGITPAAITALLVHIEK 612 >gi|268529770|ref|XP_002630011.1| Hypothetical protein CBG13376 [Caenorhabditis briggsae] gi|187028709|emb|CAP32236.1| hypothetical protein CBG_13376 [Caenorhabditis briggsae AF16] Length = 636 Score = 541 bits (1395), Expect = e-152, Method: Compositional matrix adjust. Identities = 283/620 (45%), Positives = 397/620 (64%), Gaps = 25/620 (4%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALD 66 DVIVIGGGHAGCE+AA +A+ G+ T L+T TIG MSCNP+ GG+GKGHL+RE+DALD Sbjct: 18 DVIVIGGGHAGCESAAASARCGSRTILVTQNKKTIGEMSCNPSFGGIGKGHLIREVDALD 77 Query: 67 GLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAG 126 GL GR+ D + I ++ LN +GPAV G R Q DR+LY+ MQ EI S E L+V++GEVA Sbjct: 78 GLCGRICDKSAITYQALNRAQGPAVLGLRAQIDRKLYKKHMQNEIFSTEKLEVLEGEVAE 137 Query: 127 FNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSF 186 + + + + M + ++I VV+TTGTFLR I+ G PAGR+G+ S+ L SF Sbjct: 138 LLVKNDRVVGVKMANETVISTKCVVITTGTFLRAQIYQGMSVWPAGRIGEKSSDKLSESF 197 Query: 187 MKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT---NRQIECGIT 243 +K F+ GRL+TGTP RL +I + K EK D++ IPFSF+TD I Q+ + Sbjct: 198 LKLGFELGRLRTGTPPRLMKDSIDFSKFEKVEPDKKPIPFSFLTDDIWIKYQDQLPTYLG 257 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN ET RI EN+ + + + S PRYCPS E K++RF H++FLE EGL++ Sbjct: 258 HTNEETCRIGQENMHENWQVASETTS--PRYCPSFESKLLRFPNLK-HRLFLEHEGLDSP 314 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YP G+S E+Q Q R IPGLE V I +PGY ++YD++NPK+L +LET+++ G+ Sbjct: 315 HIYPQGMSMTFKPEVQLQIFRAIPGLENVEIFQPGYGVQYDFVNPKQLKKSLETQRVEGM 374 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 FLAGQINGTTGYEEAAAQG++AGIN++ ++ K + SRT++YIGV+IDDLTS G EP Sbjct: 375 FLAGQINGTTGYEEAAAQGVIAGINASARARKEPAMEISRTEAYIGVLIDDLTSLGTNEP 434 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRM TSRAE+R+ LRPDNAD RLT IG + G IG+ R +F++ R L L Sbjct: 435 YRMLTSRAEFRLHLRPDNADIRLTEIGRRHGAIGDTRWNKFSR-------TRKSLDDLTQ 487 Query: 484 TSKNLSSTSISFKQ---------DGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIE 534 +++L + + +K+ DGK +A+E + D ++L + D ++E Sbjct: 488 KTEDLKMSMVKWKRKIPKLTARNDGKVLSAFELVHRYDLGKEDLEMLFEDV---DEEILE 544 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 RL+IE Y R + +EI E +IP + D+S++ +S E EKL +P NL Sbjct: 545 RLKIEGRYRMEHERMKAKKQEIDRESATVIPDNIDFSTMRGMSLECIEKLERARPRNLAA 604 Query: 595 ASKIEGMTPAALNLLLIYIK 614 A++I G+TP A+ +L+ Y+K Sbjct: 605 ATRISGITPEAIVVLMRYLK 624 >gi|302690612|ref|XP_003034985.1| hypothetical protein SCHCODRAFT_65522 [Schizophyllum commune H4-8] gi|300108681|gb|EFJ00083.1| hypothetical protein SCHCODRAFT_65522 [Schizophyllum commune H4-8] Length = 666 Score = 541 bits (1395), Expect = e-152, Method: Compositional matrix adjust. Identities = 292/621 (47%), Positives = 404/621 (65%), Gaps = 12/621 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDV VIGGGHAGCEAAA AA+ GA T L+T +TIG MSCNP+IGG+GKG LVRE+DA Sbjct: 24 TYDVCVIGGGHAGCEAAAGAARTGARTILLTQNPATIGEMSCNPSIGGVGKGTLVREVDA 83 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLMGRVAD AGIQFR+LN KG A+ PR Q DR LYR MQ + + NLDV G V Sbjct: 84 LGGLMGRVADKAGIQFRILNRSKGMALWSPRAQMDRVLYRTNMQGTLNNYPNLDVRAGSV 143 Query: 125 --------AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGD 176 N + I + + +I CS VV+ TGTFL G IHIG + PAGRMG+ Sbjct: 144 FDLVFDVPPSLNGSPSKIVGVKLDSGDIIPCSQVVICTGTFLGGEIHIGLKRFPAGRMGE 203 Query: 177 SPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN- 235 +PS L S F GRL+TGTPARL +I + + +Q D+ PFSF+ + N Sbjct: 204 APSIGLSASLAAAGFKLGRLQTGTPARLAKDSIDFSQMPEQLGDDPPSPFSFLHKAVDNA 263 Query: 236 -RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 +I C +TRT ETH+II +N+ H +++ + + GPRYCPS+E KI+RF + H ++ Sbjct: 264 DNRISCFMTRTTSETHQIIRDNL-HRSVHIQETRK-GPRYCPSLEAKILRFASKTSHNVW 321 Query: 295 LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT 354 LEPEG ++D++YPNGIS ++PE++Q F+RTIPGLE I+RP Y +EYD+I+P+EL + Sbjct: 322 LEPEGYDSDLIYPNGISNSMPEDVQEAFVRTIPGLENAKIVRPAYGVEYDFIDPRELGAS 381 Query: 355 LETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDD 414 LETK+I GLFLAGQINGTTGYEEAAAQG+VAGIN+ + + SR D +IGVMIDD Sbjct: 382 LETKRIGGLFLAGQINGTTGYEEAAAQGIVAGINAGLAALGKPPMIISRADGFIGVMIDD 441 Query: 415 LTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFL 474 L KG EPYRMFTSR+EYR+++R DNAD RLTP+G K+G + + R + + + + Sbjct: 442 LIVKGAEEPYRMFTSRSEYRMTIRSDNADMRLTPLGRKVGVVDDARWAAYERACGDVEEV 501 Query: 475 RSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIE 534 +LK L+ + S +S ++DG R+ ++ L YP+ S +L P + + Sbjct: 502 TRVLKETRLSPQAWVSHGMSVQRDGVYRSGWDLLGYPNVSTADLVGAIPQLANYDPQTLA 561 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 R+ I+ Y+ Y RQ + K+ +E + DY ++ LS+E+KEKL+ ++P + Sbjct: 562 RVDIDGRYSHYISRQEEDLKDFLQDESFTLDPQMDYDAVDGLSSEVKEKLAKVRPATIGA 621 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 A ++EG+TP ++ LL+ + ++ Sbjct: 622 ARRMEGITPISIVLLMRHARQ 642 >gi|261856911|ref|YP_003264194.1| glucose inhibited division protein A [Halothiobacillus neapolitanus c2] gi|261837380|gb|ACX97147.1| glucose inhibited division protein A [Halothiobacillus neapolitanus c2] Length = 626 Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust. Identities = 292/617 (47%), Positives = 392/617 (63%), Gaps = 6/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA++GA T LI+H T+G MSCNPAIGG+GKGHLVREIDAL Sbjct: 7 FDVIVVGGGHAGTEAALAAARMGAKTLLISHNIETLGQMSCNPAIGGIGKGHLVREIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M AD GIQFR LN +KGPAVR R QADR LY+ A+++ + +Q NL + Q V Sbjct: 67 GGAMALAADRGGIQFRTLNARKGPAVRATRAQADRILYKAAIRQMLENQPNLMLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + ++ I Q TVVLT GTFL G IHIG GR GD P+ L + Sbjct: 127 DLLLDGERVTGIRTQAGIEFTGKTVVLTAGTFLAGQIHIGMNNYQGGRAGDPPAQRLADR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGITR 244 + GRLKTGTP R+D ++I + Q D FSFM K +Q+ C IT Sbjct: 187 LRELSLGVGRLKTGTPPRIDIRSIDLSVMQVQPGDTPEPVFSFMGSVKDHPQQVNCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II + S +++G I+ GPRYCPSIEDKI RF +++ HQ+F+EPEGL T+ Sbjct: 247 TNERTHEIIRGGLDRSPMFTGVIEGVGPRYCPSIEDKIHRFADKDSHQVFVEPEGLTTNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP +IQ ++R+I G E+ I RPGYAIEYD+ +P+ L PTLET+ I GLF Sbjct: 307 IYPNGISTSLPFDIQLDYVRSIRGFERAVITRPGYAIEYDFFDPRGLKPTLETRAIEGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A + + + R ++Y GVMIDDL ++G LEPY Sbjct: 367 FAGQINGTTGYEEAGAQGLMAGANAAARVLGREPLTLRRDEAYAGVMIDDLITQGTLEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLTPIG LG + E R + F + ++ ++ L +L + Sbjct: 427 RMFTSRAEYRLMLREDNADQRLTPIGHALGLVDEARWRAFNEKMEAIAREQARLGALWVH 486 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLF---SICPDARKFSSLVIERLQIESS 541 + + + + A + L P+ Q L S+ P++ + V E+++IE+ Sbjct: 487 PDHPDVSRLP-GVISRGVNALDLLRRPEMDYQQLAQVPSLAPES-PLPAAVTEQIEIEAK 544 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E +E +++P D DYS + LSNE++ KL +P L QA +I G+ Sbjct: 545 YAGYVDRQKDEVSRSVKQETQVLPDDLDYSQIYGLSNEVRSKLETHRPSTLGQAGRIPGV 604 Query: 602 TPAALNLLLIYIKKNTV 618 TPAA++LL +++K+ ++ Sbjct: 605 TPAAISLLQVHLKRRSL 621 >gi|56422028|ref|YP_149346.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Geobacillus kaustophilus HTA426] gi|297531686|ref|YP_003672961.1| glucose inhibited division protein A [Geobacillus sp. C56-T3] gi|81170543|sp|Q5KU58|MNMG_GEOKA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|56381870|dbj|BAD77778.1| glucose-inhibited division protein [Geobacillus kaustophilus HTA426] gi|297254938|gb|ADI28384.1| glucose inhibited division protein A [Geobacillus sp. C56-T3] Length = 629 Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust. Identities = 277/619 (44%), Positives = 395/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAGCEAA +A++GA T +IT I M CNP+IGG KG +VREIDA Sbjct: 7 TYDVIVVGAGHAGCEAALASARIGAKTLVITLNLDMIAFMPCNPSIGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M + D IQ R+LN KGPAVR R QAD+ LY+ M++ + +QENL ++QG+V Sbjct: 67 LGGEMAKNIDKTYIQMRMLNTGKGPAVRALRAQADKVLYQREMKKTLENQENLTLLQGKV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ + VV+TTGTFLRG I IG +K +G PS L Sbjct: 127 ERLIVEDGVCKGVITHTGAHYYAKAVVITTGTFLRGEIIIGDIKYSSGPNNQQPSIKLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F+ R KTGTP R++ +TI + KTE Q D+ FS+ T K Q+ C +T Sbjct: 187 HLEELGFELVRFKTGTPPRVNSRTIDYSKTEIQPGDKEPRAFSYETTKYITDQLPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETHRII EN+ S +YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG T+ Sbjct: 247 TTEETHRIIDENLHLSPMYSGMIKGTGPRYCPSIEDKVVRFHDKPRHQIFLEPEGRETEE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE IQ + + TIPGLEK ++R GYAIEYD I P +L+PTLETK + L+ Sbjct: 307 VYVQGLSTSLPEHIQRKLLETIPGLEKAQLMRAGYAIEYDAIVPTQLWPTLETKLVKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QG++AGIN+A ++ + I SR+D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGIMAGINAAHRALGREEIILSRSDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL- 483 R+ TSRAEYR+ LR DNAD RLT +G ++G I E R ++F + + L+++++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTELGYRIGLISEERYQKFLAKKEAIEREKKRLQTVIIK 486 Query: 484 ----TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + S +DG R A + L P+ + +++ + P + + V E+++I+ Sbjct: 487 PTPKVQEVIREAGGSELKDG-IRAA-DLLRRPEMTYEHIRKLAPADEEIAPEVAEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + E + +K E + IP+D DY ++ L+ E ++KL ++P ++ QAS+I Sbjct: 545 IKYEGYIQKSLQEVERLKKMENKKIPEDIDYDAIQGLATEARQKLKQVRPLSIAQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+Y+++ + Sbjct: 605 GVNPADISILLVYLEQGRI 623 >gi|134294225|ref|YP_001117960.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia vietnamiensis G4] gi|166222919|sp|A4JA22|MNMG_BURVG RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|134137382|gb|ABO53125.1| glucose inhibited division protein A [Burkholderia vietnamiensis G4] Length = 656 Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust. Identities = 288/625 (46%), Positives = 387/625 (61%), Gaps = 15/625 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D +GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 67 GGAMAAATDESGIQFRILNSSKGPAVRATRAQADRILYKAAIRHRLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 127 DLMVEGDRVVGAVTQIGIRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQIECGIT 243 + GRLKTGTP R+DG++I + K ++Q D IP FSF+ + +Q+ C +T Sbjct: 187 LKELKLPQGRLKTGTPPRIDGRSIDFSKLDEQPGDLDPIPVFSFLGRAEQHPQQLPCWVT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPEGL T+ Sbjct: 247 HTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPEGLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP ++Q + + ++ GLE +I+RPGYAIEYDY +P+ L +LETK I+GL Sbjct: 307 EFYPNGISTSLPFDVQLELVHSMRGLENAHILRPGYAIEYDYFDPRALKASLETKAINGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+ R + D C R +Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGLNAGRYVQEKDAWCPRRDQAYLGVLVDDLVTRGVAEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F++ + LKS + Sbjct: 427 YRMFTSRAEYRLSLREDNADMRLTEIGRELGLVDDVRWDAFSRKRDAVSRETERLKSTWV 486 Query: 484 TSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----C------PDARKFSS 530 T K L +T++ K + E L P S + + C D Sbjct: 487 TPKTLPPEEATALLGKPIDHEYSLAELLRRPGISYDGVCGLKGGECGPVEPLADEPVLLG 546 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 + E+++I Y Y RQ E + E +P DY + LS E+ +KL+ +P Sbjct: 547 QIKEQVEIGIKYQGYIERQANEIERNDANENTRLPDGIDYREVRGLSFEVSQKLNEFRPE 606 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 + QAS+I G+TPAA++LL++++K+ Sbjct: 607 TIGQASRISGVTPAAISLLMVHLKR 631 >gi|289664376|ref|ZP_06485957.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 634 Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust. Identities = 286/625 (45%), Positives = 388/625 (62%), Gaps = 20/625 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAG EAA +A+ GA T L+TH ++G+MSCNPAIGG+GKGHLV+EIDAL Sbjct: 8 YDVIVIGGGHAGTEAALASARAGARTLLLTHNIESVGAMSCNPAIGGIGKGHLVKEIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M R AD AGIQ+R LN KGPAVR R QADR LYR A++ + +Q NL V Q V Sbjct: 68 GGAMARAADLAGIQWRTLNASKGPAVRATRCQADRNLYRNAIRCIVEAQPNLTVFQAAVD 127 Query: 126 GF-----NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 +E + + ++ Q +VVLT GTFL G IH+G+ + AGRMGD P+ Sbjct: 128 DLIIRNGTSEADSVRGVITQTGLRFEAPSVVLTAGTFLAGKIHVGETQYAAGRMGDPPAT 187 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + F RLKTGTP R+DG+T+ + +Q D+ L SFM + RQ+ Sbjct: 188 TLAARLRERPFAIDRLKTGTPPRIDGRTLDYSVMVEQPGDDPLPVMSFMGQVSDHPRQVS 247 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT+T +TH II + S +YSG I+ GPRYCPSIEDK+VRF E+ HQIF+EPEG Sbjct: 248 CWITQTTEQTHEIIRNALHRSPLYSGQIEGIGPRYCPSIEDKVVRFAEKTSHQIFVEPEG 307 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L +YPNGIST+LP ++Q +R+I G +I RPGYAIEYD+ +P+ L +LETK Sbjct: 308 LEVAEIYPNGISTSLPFDVQLALVRSIHGFANAHITRPGYAIEYDFFDPRGLKASLETKA 367 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 + GLF AGQINGTTGYEEAAAQGL+AG+N+AR L R ++Y+GV++DDL + G Sbjct: 368 VGGLFFAGQINGTTGYEEAAAQGLLAGLNAARHVQGLPAWSPRRDEAYLGVLVDDLITHG 427 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +G ++G + R RF+ + + L Sbjct: 428 TTEPYRMFTSRAEYRLQLREDNADARLTGVGHEMGLVDNARWARFSAKQEAVQRETARLS 487 Query: 480 SLVLTSKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLFSI------CPDARKFSS 530 +L T N ++ + + + P+ + L + DA+ Sbjct: 488 ALWATPGNALGREVADALGVTVSRETNVLDLIKRPELNYATLMRVPTLGPGVDDAQ---- 543 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 V E+++I YA Y RQ + + E IP FDY+ + LS E+++KL ++P Sbjct: 544 -VAEQVEISVKYAGYLDRQRDDIARQQRHETTPIPDGFDYAVVRGLSIEVRQKLERVRPQ 602 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 ++ QA +I GMTPAA++LLL+++++ Sbjct: 603 HIGQAQRIPGMTPAAISLLLVHLER 627 >gi|251778676|ref|ZP_04821596.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082991|gb|EES48881.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 626 Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust. Identities = 278/611 (45%), Positives = 394/611 (64%), Gaps = 3/611 (0%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALD 66 DVIV+G GHAGCEAA +A++G +T + T +I M CNP IGG KGHLVREIDAL Sbjct: 11 DVIVVGAGHAGCEAALASARMGLNTLICTINLDSIAMMPCNPNIGGTAKGHLVREIDALG 70 Query: 67 GLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAG 126 G MG D IQ R+LN KGPAV R QAD++ Y+ M+R + QENL + Q EV Sbjct: 71 GEMGVNIDHTFIQSRMLNTSKGPAVHSLRAQADKKDYQFRMKRVLEEQENLQIRQIEVTE 130 Query: 127 FNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSF 186 E N + I+ ++ ++ R V+L TGT+L+G I IG++ G G P+N L S Sbjct: 131 LLVEGNKVIGIITRNGAIFRSKAVILATGTYLKGKIIIGEVSYSGGPNGLFPANDLSQSL 190 Query: 187 MKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTN 246 + R KTGTPAR++ +++ + K +Q D++++PFSFM+ I QI C +T TN Sbjct: 191 LDLGISLRRFKTGTPARINRRSVDFSKMIEQPGDDKIVPFSFMSGNIDKEQISCYLTYTN 250 Query: 247 LETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVY 306 +TH +I ENI S IY+G IK GPRYCPSIEDK++RF ++ HQIF+EPEGL+T +Y Sbjct: 251 EQTHNVIKENIGRSPIYNGSIKGVGPRYCPSIEDKVMRFPDKLQHQIFVEPEGLDTLEMY 310 Query: 307 PNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLA 366 G+S++LPEE+Q + +RT+PGLE V I+R YAIEYD ++P EL PTLE K + GL+ A Sbjct: 311 VGGMSSSLPEEVQLKMMRTLPGLENVEIMRTAYAIEYDSVDPTELEPTLEFKNVEGLYGA 370 Query: 367 GQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRM 426 GQ NG++GYEEA AQGLVAGIN+A K D + +R+D+YIGV+IDDL +KG EPYRM Sbjct: 371 GQFNGSSGYEEAGAQGLVAGINAALKIKGEDPMILTRSDAYIGVLIDDLVTKGTNEPYRM 430 Query: 427 FTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSK 486 TSRAEYR+ LR DNAD RLT IG K+G + E R + F LK L +T+K Sbjct: 431 MTSRAEYRLILRQDNADFRLTEIGKKVGLVTEERYETFLNRKNTIENELERLKKLQITNK 490 Query: 487 NLSST---SISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 ++ ++ + K + YE + P+ +L + + + S + E++ I + Y Sbjct: 491 RETNEFLLAVGSAELKKPISFYELIKRPEVDYFSLKDLDMEREELSEDIGEQINIIAKYE 550 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y Q+ + + + EK+L+PKD DYS++ L E ++KL+ ++P ++ QAS+I G++P Sbjct: 551 GYISNQLEQVAQFRKFEKKLLPKDIDYSNVKGLRTEAEQKLNSIRPISIGQASRISGVSP 610 Query: 604 AALNLLLIYIK 614 A +++LLIY++ Sbjct: 611 ADISVLLIYLE 621 >gi|330837281|ref|YP_004411922.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Spirochaeta coccoides DSM 17374] gi|329749184|gb|AEC02540.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Spirochaeta coccoides DSM 17374] Length = 630 Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust. Identities = 286/622 (45%), Positives = 395/622 (63%), Gaps = 36/622 (5%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 Y+ IV+GGGHAG EA+ A++G T L+T TIG MSCNPAIGGL KG+LVRE+DAL Sbjct: 3 YEAIVVGGGHAGIEASLALARMGHRTLLVTQSLDTIGRMSCNPAIGGLAKGNLVREVDAL 62 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG + DA IQFR+LN ++GPAV+ PR QAD+ Y L++E L+V +G Sbjct: 63 GGQMGLLIDATTIQFRILNRRRGPAVQAPRAQADKFSYSR------LAKETLEVQKGLSL 116 Query: 126 GFNTEKNIISS--------IVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 +T ++I S +V + I TVV+TTGTF+ G I IG +GR+G+ Sbjct: 117 FMDTVTDLIVSEDGRRVEGVVTERGHRIGARTVVVTTGTFMDGRIFIGDYDASSGRLGEP 176 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ 237 + L +S + FD GRLKTGTPAR+ ++ + + E Q D + PFSFMT KI Q Sbjct: 177 AAMGLGSSLRRLGFDVGRLKTGTPARVRRSSLDFSRLEVQPGDGAMQPFSFMTGKIHRPQ 236 Query: 238 IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 ++C IT T TH+II +NI S +Y G I GPRYCPSIEDK+VRF ER HQIF+EP Sbjct: 237 MDCYITWTTDVTHQIIRDNIGRSPLYGGKISGKGPRYCPSIEDKVVRFPERERHQIFVEP 296 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EG T+ +Y NG+S++LPE++Q FI T+PGLE+ ++RPGYA+EYDY+NP +L P+LET Sbjct: 297 EGEGTEEMYLNGLSSSLPEDVQTAFIHTLPGLERAEVMRPGYAVEYDYLNPIQLLPSLET 356 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 KK+ GLFLAGQ NGT+GYEEAAAQGL+AGIN+A + + SR+D+YIGV+IDDL + Sbjct: 357 KKLEGLFLAGQTNGTSGYEEAAAQGLMAGINAALVLSGEKPLILSRSDAYIGVLIDDLVT 416 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLG-CIGER--RQKRFAKYIQEYNFL 474 KG EPYRMFTSRAEYR++LR D+AD RLTP+ G GER R K A+ I E Sbjct: 417 KGTQEPYRMFTSRAEYRLNLRHDDADQRLTPLSHAHGLATGERMERLKEKARAIAE---- 472 Query: 475 RSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIE 534 +K+++ S+ S ++A E L P+ SI ++ + P + V++ Sbjct: 473 ---VKAILTASRKGS------------QSATEILKRPEVSIADILADVPSLSTYDEAVLQ 517 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++++ Y Y RQ E + E LIP F+Y + +SNE +EK + P +L Q Sbjct: 518 QVELDVKYEGYILRQEREVERFARLENILIPDGFNYDKVDGISNESREKFKQILPRSLGQ 577 Query: 595 ASKIEGMTPAALNLLLIYIKKN 616 A +I G+ + + +L+++I + Sbjct: 578 AGRISGVRSSDIAILMVHISQE 599 >gi|330815034|ref|YP_004358739.1| Glucose inhibited division protein A [Burkholderia gladioli BSR3] gi|327367427|gb|AEA58783.1| Glucose inhibited division protein A [Burkholderia gladioli BSR3] Length = 656 Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust. Identities = 290/626 (46%), Positives = 392/626 (62%), Gaps = 15/626 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALAAARMGVKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D AGIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 67 GGAMAIATDEAGIQFRILNSSKGPAVRATRAQADRLLYKQAIRSRLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + V Q R VVLT GTFL G IH+G GR GD + SL + Sbjct: 127 DLIVEGERVVGAVTQIGIRFRARAVVLTAGTFLDGKIHVGLNNHTGGRAGDPAAVSLSSR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTD-KITNRQIECGIT 243 + GRLKTGTP R+DG++I + K E+Q D +P FSF+ ++ RQ+ C +T Sbjct: 187 LKELKLPQGRLKTGTPPRIDGRSIDFSKLEEQPGDLDPVPVFSFLGRVEMHPRQMPCWVT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T+ Sbjct: 247 HTNERTHDIIRSGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP ++Q + ++ GLE +I+RPGYAIEYDY +P+ L +LETK I GL Sbjct: 307 EFYPNGISTSLPFDVQLDLVHSMRGLEHAHILRPGYAIEYDYFDPRGLKASLETKAIEGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ R + + D C R ++Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGINAGRYAQEKDAWCPRRDEAYLGVLVDDLVTRGVSEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F++ + L+S + Sbjct: 427 YRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDDARWDAFSRKRDAVSRETERLRSTWV 486 Query: 484 TSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----CPDARKFS------S 530 T K L +T++ K + E L P S + + C A + + Sbjct: 487 TPKTLPAEEATALLGKAIDHEYSLAELLRRPGVSYAGVCGLRGGECGPAEPLAEDPVLLA 546 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 + E+++I Y Y RQ E + E +P+ DY+ + LS E ++KL+ +P Sbjct: 547 QIEEQIEIGIKYQGYIERQAGEIERNGAHENTRLPEGIDYAEVRGLSFEARQKLNQHRPE 606 Query: 591 NLLQASKIEGMTPAALNLLLIYIKKN 616 + QAS+I G+TPAA++LL++++K+ Sbjct: 607 TIGQASRISGITPAAISLLMVHLKRG 632 >gi|124268971|ref|YP_001022975.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Methylibium petroleiphilum PM1] gi|205831533|sp|A2SMF1|MNMG_METPP RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|124261746|gb|ABM96740.1| putative glucose inhibited division protein A [Methylibium petroleiphilum PM1] Length = 667 Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust. Identities = 291/646 (45%), Positives = 391/646 (60%), Gaps = 33/646 (5%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DVIV+GGGHAG EAA AA++G +T L+TH T+G MSCNP+IGG+GKGHLV+EID Sbjct: 5 QEFDVIVVGGGHAGTEAALAAARMGCATLLLTHNIETLGQMSCNPSIGGIGKGHLVKEID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D AGIQFR+LN KGPAVR R QADR LY+ A++R + +Q L + Q Sbjct: 65 ALGGAMALATDEAGIQFRILNGSKGPAVRATRAQADRVLYKAAIRRRLENQPRLWLFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + + V Q R VVLT GTFL G IH+G AGR GD P+ SL Sbjct: 125 VDDLIVEGDRVIGAVTQVGVRFRSKAVVLTAGTFLDGRIHVGLQNYAAGRAGDPPAQSLS 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQIECG 241 + GRLKTGTP R+DG+TI +++ +Q D +P FS+M D + RQ+ C Sbjct: 185 ARLKELQLPQGRLKTGTPPRIDGRTIDFERLLEQPGDADPVPVFSYMGDAAMHPRQLPCW 244 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT T+ TH II S +++G I+ GPRYCPSIEDK+ RF ++ HQIFLEPEGL+ Sbjct: 245 ITHTSERTHEIIRSGFDRSPMFTGVIEGVGPRYCPSIEDKVNRFADKTSHQIFLEPEGLS 304 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T YPNGIST+LP +IQ +R++ GLE+ +I+RPGYAIEYDY +P+ L + ETK I Sbjct: 305 THEFYPNGISTSLPFDIQLAALRSMSGLEQAHILRPGYAIEYDYFDPRGLKSSFETKAIG 364 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQINGTTGYEEAAAQGL AG+N+AR+ +LD R +Y+GV++DDL +KGV Sbjct: 365 GLFFAGQINGTTGYEEAAAQGLFAGVNAARQVQELDAWLPRRDQAYLGVLVDDLITKGVT 424 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAE+R+ LR DNAD RLT G ++G + + R F + + LKS Sbjct: 425 EPYRMFTSRAEFRLQLREDNADLRLTDAGREMGLVDDERWAAFNRKRDAVSRETERLKST 484 Query: 482 VLTSKNLSSTSISFKQDGKTRTAY---EFLSYP--DFSIQNLFSICPDARK--------- 527 + + L + Y + L P DF + AR+ Sbjct: 485 WVNAALLPAADAERLVGKALEHEYALVDLLRRPGVDFDAVAEVAQIAHARRSEGRQADDP 544 Query: 528 -----------------FSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDY 570 + VI++L+ + YA Y +Q + + E +P+ DY Sbjct: 545 AAAAWSRAALRNEWGPALADAVIQQLETATKYAGYIDKQNEQVERAAQYEDLKLPESLDY 604 Query: 571 SSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKN 616 + ALS+E+++KL L+P L QA+++ G+TPAA++LLLI++KK Sbjct: 605 RQVAALSHEVRQKLQALRPETLGQAARVSGVTPAAISLLLIHLKKG 650 >gi|307731470|ref|YP_003908694.1| glucose inhibited division protein A [Burkholderia sp. CCGE1003] gi|307586005|gb|ADN59403.1| glucose inhibited division protein A [Burkholderia sp. CCGE1003] Length = 652 Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust. Identities = 286/626 (45%), Positives = 388/626 (61%), Gaps = 15/626 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++G T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALASARMGNKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 67 GGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRLLYKQAIRHRLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 127 DLMVEGDRVVGAVTQVGIRFRSRAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQIECGIT 243 + GRLKTGTP R+DG+TI + + E+Q D +P FSF+ + RQ+ C +T Sbjct: 187 LKELKLPQGRLKTGTPPRIDGRTIDFSQLEEQPGDLDPVPVFSFLGRAEQHPRQVPCWVT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPEGL T+ Sbjct: 247 HTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFATKESHQIFLEPEGLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP ++Q + +R++ GLE +I+RPGYAIEYDY +P+ L +LETK I+GL Sbjct: 307 EFYPNGISTSLPFDVQLELVRSMRGLEHAHILRPGYAIEYDYFDPRGLKASLETKVINGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ D C R +Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGINAGLFVQGRDAWCPRRDQAYLGVLVDDLVTRGVSEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F++ + L++ + Sbjct: 427 YRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDDARWDAFSRKRDAVSRETERLRTTWV 486 Query: 484 TSKNLS---STSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----CPDARKFS------S 530 K LS +T++ K + E L P S + ++ C + + Sbjct: 487 NPKTLSADEATALLGKPIDHEYSLAELLRRPGVSYDGVCALREGTCAAPGPLAEDEVLLA 546 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 + E+++I Y Y RQ E + + E +P DY+ + LS E ++KL+ +P Sbjct: 547 QIKEQIEIGIKYQGYIDRQAGEIERNEAHESTRLPDGLDYAEVRGLSFEARQKLTQFRPE 606 Query: 591 NLLQASKIEGMTPAALNLLLIYIKKN 616 + QAS+I G+TPAA++LL++++K+ Sbjct: 607 TIGQASRISGITPAAISLLMVHLKRG 632 >gi|260549419|ref|ZP_05823638.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Acinetobacter sp. RUH2624] gi|260407528|gb|EEX01002.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Acinetobacter sp. RUH2624] Length = 626 Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust. Identities = 291/619 (47%), Positives = 389/619 (62%), Gaps = 6/619 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GK HLVREID Sbjct: 5 KVYDVIVIGGGHAGTEAALAAARMGRQTLLLTHNIETLGQMSCNPAIGGIGKSHLVREID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M AD GIQFR+LN +KG AVR R QADR Y+ A++ + +Q NLD+ Q Sbjct: 65 ALGGAMALAADKGGIQFRILNSRKGAAVRATRAQADRVRYKAAIRETLENQANLDIFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 E + + +V Q TVVLTTGTFL GVIH+G K GR GD PS +L Sbjct: 125 ADDLIVEGDTVKGVVTQMGIRFDAKTVVLTTGTFLGGVIHVGLEKSSGGRAGDPPSIALA 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + GRLKTGTP R+D +++ + Q D SFM D + Q+ C I Sbjct: 185 QRLRELKLPVGRLKTGTPPRIDARSVDFSVMTPQPGDFPSPVMSFMGDASMHPEQVNCYI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II + S +Y+G I+ GPRYCPSIEDKI RF +++ HQ+FLEPEGL+T Sbjct: 245 THTNEKTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFSDKDSHQVFLEPEGLDT 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNGIST+LP ++Q + +R+I G+E +I+RPGYAIEYDY NP+ L TLETK I+G Sbjct: 305 HELYPNGISTSLPFDVQFELVRSIRGMENAHILRPGYAIEYDYFNPQALKFTLETKAING 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQINGTTGYEEA AQGL+AG+N+AR++ + + R +Y+GV++DDL + G E Sbjct: 365 LYFAGQINGTTGYEEAGAQGLLAGLNAARRAWEQEEWTPKRDQAYMGVLVDDLITLGTKE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT IG +LG + + R + + ++ S L+ L Sbjct: 425 PYRMFTSRAEYRLMLREDNADQRLTTIGRELGLVDDVRWAAYCEKMEAVERETSRLQHLW 484 Query: 483 LTSKNLSS---TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 N ++ K +A + L P+ S + + + S V E+++I Sbjct: 485 AAPNNPMGKKFVEMTGADLSKECSAIDLLKRPNISFAQIAELT--GSEVSEQVGEQIEIA 542 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ + ++K E+ IP DFDY + LS E+ +KL ++P L QAS+I Sbjct: 543 VKYEGYINRQHEDVAQLKRLEETKIPADFDYDVVSGLSREITQKLKTVRPETLAQASRIP 602 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+TPAA+ L++I I+KN + Sbjct: 603 GVTPAAVQLVMITIRKNNM 621 >gi|189220413|ref|YP_001941053.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Methylacidiphilum infernorum V4] gi|189187271|gb|ACD84456.1| Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Methylacidiphilum infernorum V4] Length = 623 Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust. Identities = 300/632 (47%), Positives = 393/632 (62%), Gaps = 40/632 (6%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIV+GGGHAG EAA A++G T L+T TIG MSCNP+IGG+GKGHLVREID Sbjct: 9 KKYDVIVVGGGHAGVEAALACARMGCQTLLLTMNLDTIGQMSCNPSIGGIGKGHLVREID 68 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G MG D GIQFR+LN+KKG +V+ PR Q D++ Y+ ++ NLD+ Q Sbjct: 69 ALGGEMGINTDLTGIQFRMLNLKKGYSVQAPRAQCDKKAYQFRLKAVCERTSNLDLFQAS 128 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V+ +++ I I+ + +I S V++TTGTFLRG++H+G+ K GRMG+S S+SL Sbjct: 129 VSDLIVKEDKIKGIITELGIVIHASAVIVTTGTFLRGLLHVGRNKKTGGRMGES-SSSLS 187 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-----TDK----IT 234 + K+ F+ GRLKTGTP R++GKTI + K Q D FSF TDK Sbjct: 188 DVLRKYGFEVGRLKTGTPPRVNGKTIDFSKCMMQPGDTPPPHFSFALSDLDTDKEGMYTL 247 Query: 235 NR---------QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRF 285 NR Q+ C IT TN +TH II EN+ S +Y G+I+ GPRYCPSIEDKIVRF Sbjct: 248 NRWKEGMFHVEQLACAITYTNAKTHAIIRENLHTSPLYCGEIQGVGPRYCPSIEDKIVRF 307 Query: 286 GERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDY 345 ++ HQIFLEPEG +T+ Y NG ST+LP E+Q QFI +I GLE IIRPGYA+EYDY Sbjct: 308 ADKERHQIFLEPEGRHTEEYYVNGCSTSLPFEVQDQFIHSIEGLEHCQIIRPGYAVEYDY 367 Query: 346 INPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTD 405 +++PT+ETK I GLF AGQINGTTGYEEAA+QGL+AGIN+ARK + R Sbjct: 368 CPATQIYPTMETKTIEGLFFAGQINGTTGYEEAASQGLIAGINAARKIQNNPPLILGRDQ 427 Query: 406 SYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFA 465 +YIGV+IDDLT+K + EPYR+FTSRAE+R+ LR DNAD RLT IG LG + R R Sbjct: 428 AYIGVLIDDLTTKPIREPYRIFTSRAEHRLVLRQDNADLRLTEIGYSLGLASKARLMR-- 485 Query: 466 KYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA 525 +QE + L++ + +S + E L P++S +L Sbjct: 486 --VQEK---KRLIEETFQKIRQYRLNGLSLE---------EMLKRPEYSWSHLPLEFQGV 531 Query: 526 RKFSSLVIERLQIESSYAAYTGRQM-IEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKL 584 K +L IE E YA Y R+ + K K EE +IP + DY +P L E +EKL Sbjct: 532 PKDVALHIE---CEIKYAGYIARERELILKRQKLEES-IIPANIDYEKIPGLKQEAREKL 587 Query: 585 SILKPFNLLQASKIEGMTPAALNLLLIYIKKN 616 S +KP QAS+I G+ P + +++I+ KKN Sbjct: 588 SRMKPLTFGQASRIPGVNPTDVAIIMIWAKKN 619 >gi|91785745|ref|YP_560951.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia xenovorans LB400] gi|123358350|sp|Q13SP0|MNMG_BURXL RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|91689699|gb|ABE32899.1| Glucose-inhibited division protein A subfamily [Burkholderia xenovorans LB400] Length = 652 Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust. Identities = 285/626 (45%), Positives = 391/626 (62%), Gaps = 15/626 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++G +T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALASARMGNTTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 67 GGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRLLYKQAIRHRLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 127 DLMVEGDRVVGAVTQVGIRFRGRAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTD-KITNRQIECGIT 243 + GRLKTGTP R+DG+TI + + E+Q D +P FSF+ + RQ+ C +T Sbjct: 187 LKELKLPQGRLKTGTPPRIDGRTIDFSQLEEQPGDLDPVPVFSFLGRVEQHPRQVPCWVT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPEGL T+ Sbjct: 247 HTNARTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPEGLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP ++Q + +R++ GLE +I+RPGYAIEYDY +P+ L +LETK ISGL Sbjct: 307 EFYPNGISTSLPFDVQLELVRSMRGLEHAHILRPGYAIEYDYFDPRGLKASLETKVISGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ + C R +Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGINAGLYVQGKEAWCPRRDQAYLGVLVDDLVTRGVSEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F++ + L++ + Sbjct: 427 YRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDDVRWDAFSRKRDAVSRETERLRTTWV 486 Query: 484 TSKNLS---STSISFKQDGKTRTAYEFLSYPDFSIQNLFSI------CPDARKFSSLVI- 533 K LS +T++ K + + L P S + ++ P+ +++ Sbjct: 487 NPKTLSADEATALLGKPIDHEYSLADLLRRPGVSYDGVCALRAGACAAPETLAEDDVLLA 546 Query: 534 ---ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 E+++I Y Y RQ E + + E +P+ DY+ + LS E ++KL+ +P Sbjct: 547 QIKEQIEIGIKYQGYIDRQAGEIERNEAHESTRLPEGLDYAEVRGLSFEARQKLTQFRPE 606 Query: 591 NLLQASKIEGMTPAALNLLLIYIKKN 616 + QAS+I G+TPAA++LL++++K+ Sbjct: 607 TIGQASRISGITPAAISLLMVHLKRG 632 >gi|154298844|ref|XP_001549843.1| hypothetical protein BC1G_11669 [Botryotinia fuckeliana B05.10] gi|150857574|gb|EDN32766.1| hypothetical protein BC1G_11669 [Botryotinia fuckeliana B05.10] Length = 659 Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust. Identities = 277/618 (44%), Positives = 384/618 (62%), Gaps = 10/618 (1%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 R YDV+VIGGGHAG EA A +A+ GA TALIT K IG SCNP+ GG+GKG ++RE+ Sbjct: 35 TRPYDVVVIGGGHAGAEACAGSARSGARTALITPKLENIGVCSCNPSFGGIGKGTMLREV 94 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DALDG+ GR+ D AG+QF+VLN KKGPAV GPR Q DR+LY+ M+ E+ + NL ++ G Sbjct: 95 DALDGVAGRIIDKAGVQFKVLNRKKGPAVWGPRAQIDRDLYKKHMREELEAYPNLSIVTG 154 Query: 123 EVAGF-------NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMG 175 VA + I+ + ++ +I VV+TTGTFL G IHIG PAGRMG Sbjct: 155 SVADIIVSKEEGEAQSGKITGVRLESGEIIPTKQVVITTGTFLGGEIHIGLECYPAGRMG 214 Query: 176 DSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT- 234 ++ + L S F GRLKTGTP RL +I + Q D+ PFS++ + ++ Sbjct: 215 EAATFGLSKSLKDAGFTLGRLKTGTPPRLAKGSIDFKNLTVQPGDQPPTPFSYLNETVSV 274 Query: 235 NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 Q+ C T TN +H ++ N+ S +K GPRYCPS+E K++RF +++ H ++ Sbjct: 275 QDQLLCHATYTNEASHAVVRANLDKSIHIRETVK--GPRYCPSLESKVIRFSDKDRHIVW 332 Query: 295 LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT 354 LEPEG ++DV+YPNGIS +P E Q Q ++TIPGLE V + PGY +EYDY++P+ L T Sbjct: 333 LEPEGFDSDVIYPNGISMTIPAEAQEQLLKTIPGLENVTMTAPGYGVEYDYVDPRSLKAT 392 Query: 355 LETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDD 414 LETK I GL+LAGQINGTTGYEEAAAQG++AGIN+ S L + SR+D YIG+MIDD Sbjct: 393 LETKAIQGLYLAGQINGTTGYEEAAAQGIIAGINAGLASQSLPQLTLSRSDGYIGIMIDD 452 Query: 415 LTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFL 474 L +KGV EPYRMFTSR+EYR+S R DNAD RLT G G +GE+R F + + L Sbjct: 453 LITKGVSEPYRMFTSRSEYRMSARADNADLRLTEKGRVAGVVGEKRWSVFNDEVAQMGGL 512 Query: 475 RSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIE 534 + L++ ++ + D R A + L D ++ +L + P+ ++ + + Sbjct: 513 KLALENSKFSAPVWINDGFKVSNDSTMRNALDILRIRDVTMNDLSTRVPEILTYTQRIRD 572 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 R+ IE+ YA Y +Q + + +E +P D DY S+ +S K L I +P ++ Q Sbjct: 573 RVGIEAVYAPYVIQQKAAQRVFQKDEMLKLPVDLDYDSIHGISMHEKSVLKITRPESVGQ 632 Query: 595 ASKIEGMTPAALNLLLIY 612 A +IEGMTP+ LL + Sbjct: 633 ARRIEGMTPSGCLRLLAF 650 >gi|226941925|ref|YP_002796999.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Laribacter hongkongensis HLHK9] gi|254811513|sp|C1D5H3|MNMG_LARHH RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|226716852|gb|ACO75990.1| GidA [Laribacter hongkongensis HLHK9] Length = 628 Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust. Identities = 284/622 (45%), Positives = 387/622 (62%), Gaps = 5/622 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA++G ST L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALAAARMGRSTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR LN KGPAVR R QADR Y+ A++ + +Q NL + Q V Sbjct: 67 GGAMALATDMGGIQFRTLNASKGPAVRATRAQADRVRYKAAIRHMLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + + ++ + Q TVVLT GTFL G IHIG GR GD +++L Sbjct: 127 DLVMQGDRVAGAITQAGITFMSRTVVLTAGTFLSGKIHIGLENYTGGRAGDPAASTLGAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK-ITNRQIECGITR 244 + GRLKTGTP R+DG++I + E Q D+ FSF + + +Q+ C +T Sbjct: 187 LRDYALPVGRLKTGTPPRIDGRSIDFSVLEMQPGDDPAPVFSFRGSRDMHPQQLPCWVTH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TNL TH II S +++G I+ GPRYCPSIEDKI RF +R+ HQIFLEPEGL+T Sbjct: 247 TNLRTHEIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADRDSHQIFLEPEGLDTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNG+ST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L TLE+++++GLF Sbjct: 307 IYPNGVSTSLPFDIQLAALRSMKGLENAHILRPGYAIEYDYFDPRALRHTLESRRVAGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR + + R ++Y+GV++DDLT+ GV EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARAARDEEGWYPGREEAYLGVLVDDLTTLGVNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAE+R+ LR DNAD RLT G +LG +G+ + F + R LKS + Sbjct: 427 RMFTSRAEFRLQLREDNADLRLTETGRRLGLVGDAQWDIFCRKRDAVAAERERLKSTWVN 486 Query: 485 SKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSICP-DARKFSSLVIERLQIES 540 + +S Y E L P L ++ S V E+++I+ Sbjct: 487 PRLVSEEDARRVLGQPVEREYSLEELLRRPGVDYATLATLPAFGGEALSGAVAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E + E IP FD+S++ LS E+++KL++ +P L QAS+I G Sbjct: 547 KYQGYIDRQHEEVARREATEHVRIPAAFDFSAVSGLSKEVQQKLALHRPETLGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTVKLNE 622 +TPAA++LL +Y+K+ +E Sbjct: 607 VTPAAISLLHVYLKRAGAPKSE 628 >gi|261420901|ref|YP_003254583.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Geobacillus sp. Y412MC61] gi|319768572|ref|YP_004134073.1| glucose inhibited division protein A [Geobacillus sp. Y412MC52] gi|261377358|gb|ACX80101.1| glucose inhibited division protein A [Geobacillus sp. Y412MC61] gi|317113438|gb|ADU95930.1| glucose inhibited division protein A [Geobacillus sp. Y412MC52] Length = 629 Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust. Identities = 277/619 (44%), Positives = 394/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAGCEAA +A++GA T +IT I M CNP+IGG KG +VREIDA Sbjct: 7 TYDVIVVGAGHAGCEAALASARIGAKTLVITLNLDMIAFMPCNPSIGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M + D IQ R+LN KGPAVR R QAD+ LY+ M++ + +QENL ++QG+V Sbjct: 67 LGGEMAKNIDKTYIQMRMLNTGKGPAVRALRAQADKVLYQREMKKTLENQENLTLLQGKV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ + VV+TTGTFLRG I IG +K +G PS L Sbjct: 127 ERLIVEDGVCKGVITHTGAHYYAKAVVITTGTFLRGEIIIGDIKYSSGPNNQQPSIKLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F+ R KTGTP R++ +TI + KTE Q D+ FS+ T K Q+ C +T Sbjct: 187 HLEELGFELVRFKTGTPPRVNSRTIDYSKTEIQPGDKEPRAFSYETTKYITDQLPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETHRII EN+ S +YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG T+ Sbjct: 247 TTEETHRIIDENLHLSPMYSGMIKGTGPRYCPSIEDKVVRFHDKPRHQIFLEPEGRETEE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE IQ + + TIPGLEK ++R GYAIEYD I P +L+PTLETK + L+ Sbjct: 307 VYVQGLSTSLPEHIQRKLLETIPGLEKAQLMRAGYAIEYDAIVPTQLWPTLETKLVKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QG++AGIN+A ++ + I SR+D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGIMAGINAAHRALGREEIILSRSDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL- 483 R+ TSRAEYR+ LR DNAD RLT +G ++G I E R ++F + + L+++++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTELGYRIGLISEERYQKFLAKKEAIEREKKRLQTVIIK 486 Query: 484 ----TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + S +DG R A + L P+ + +++ + P + + V E+++I+ Sbjct: 487 PTPKVQEVIREAGGSELKDG-IRAA-DLLRRPEMTYEHIRKLAPADEEIAPEVAEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + E + +K E + IP+D DY + L+ E ++KL ++P ++ QAS+I Sbjct: 545 IKYEGYIQKSLQEVERLKKMENKKIPEDIDYDGIQGLATEARQKLKQVRPLSIAQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+Y+++ + Sbjct: 605 GVNPADISILLVYLEQGRI 623 >gi|149911787|ref|ZP_01900391.1| glucose-inhibited division protein A [Moritella sp. PE36] gi|149805133|gb|EDM65155.1| glucose-inhibited division protein A [Moritella sp. PE36] Length = 627 Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust. Identities = 297/621 (47%), Positives = 398/621 (64%), Gaps = 5/621 (0%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 + ++VIV+GGGHAG EAAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EI Sbjct: 4 HEQFEVIVVGGGHAGTEAAAAAARMGRKTLLLTHNIDTLGHMSCNPAIGGIGKGHLVKEI 63 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G+MG+ D GIQFR LN KGPAVR R QADR LY+ A+++++ +Q+NL + Q Sbjct: 64 DALGGIMGQATDLGGIQFRTLNSSKGPAVRATRAQADRLLYKSAVRQKLENQQNLTIFQQ 123 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 V E + + ++ Q R +VVLT GTFL G+IHIG P GR GD S SL Sbjct: 124 SVDDLIIENDRVVGVMTQAGLSFRAKSVVLTVGTFLDGLIHIGLQNYPGGRAGDPASVSL 183 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQIECG 241 + TGRLKTGTP R+DG+TI + E+Q D+ FSF+ + K +QI C Sbjct: 184 AARLRELPIRTGRLKTGTPPRIDGRTIDFSVMEEQHGDKPTPVFSFIGSRKDHPQQIPCY 243 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT TN +TH +I + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIF+EPEGL Sbjct: 244 ITHTNNKTHDVIRSGMDRSPMYTGVIEGIGPRYCPSIEDKITRFADKESHQIFIEPEGLT 303 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T VYPNGIST+LP ++Q +R+I GLE +I RPGYAIEYDY +P++L TLE+K I Sbjct: 304 THEVYPNGISTSLPYDVQVDLVRSIRGLENAHITRPGYAIEYDYFDPRDLKLTLESKFIE 363 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLFLAGQINGTTGYEEAAAQGL+AG+N+AR + + D R +Y+GV++DDL + G Sbjct: 364 GLFLAGQINGTTGYEEAAAQGLLAGLNAARTAREEDTWHPRRDQAYLGVLVDDLATLGTK 423 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+ LR DNAD RLT G +LG + + R + F + ++ + L+S Sbjct: 424 EPYRMFTSRAEYRLILREDNADARLTEQGRELGLVDDHRWQVFNEKMEAIELEQQRLRST 483 Query: 482 VLTSKNLSSTSIS---FKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFS-SLVIERLQ 537 + + I+ K + T + L P+ + L +I K E+++ Sbjct: 484 WINPNKAFADKINAILAKPLSREHTLEDLLRRPEVTYNALMTIEELGPKLEHESAAEQVE 543 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I Y Y RQ E ++ E L+P D DY+ + LSNE+ KL +KP + AS+ Sbjct: 544 ITIKYEGYINRQKAEIEKQLRHENTLLPTDLDYAKIKGLSNEVIAKLVDVKPQTIGMASR 603 Query: 598 IEGMTPAALNLLLIYIKKNTV 618 I G+TPAA+++LLIY+KK + Sbjct: 604 ISGITPAAISILLIYLKKQNL 624 >gi|255003397|ref|ZP_05278361.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Anaplasma marginale str. Puerto Rico] Length = 630 Score = 540 bits (1391), Expect = e-151, Method: Compositional matrix adjust. Identities = 276/590 (46%), Positives = 372/590 (63%), Gaps = 7/590 (1%) Query: 31 TALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPA 90 T LITHK +IG MSCNPAIGG+ KG +VRE+DALDGLMG+ D A I +LN KGPA Sbjct: 32 TLLITHKIGSIGEMSCNPAIGGVAKGVVVREVDALDGLMGQAIDKASIHSTILNQSKGPA 91 Query: 91 VRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKN----IISSIVMQDNSMIR 146 V GPR QADR+ YR AMQ +L +NL+V++ V F+T+ ++S+ + ++ Sbjct: 92 VWGPRAQADRDAYRTAMQDIVLGYKNLEVLEASVIDFSTDNEAGSPCVASVTLSCGKVLH 151 Query: 147 CSTVVLTTGTFLRGVIHIGKLK-IPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLD 205 +VL TGTFL G+IH+G+ K IPAGRMGD PS L + F GRLKTGTP R+D Sbjct: 152 TRRLVLATGTFLGGMIHVGRDKGIPAGRMGDKPSTRLAKALCAHGFMLGRLKTGTPPRID 211 Query: 206 GKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSG 265 +I W T +Q D PFSF++D I Q+ C IT TN +TH I+ N+ +A + Sbjct: 212 RSSIDWSATAEQKGDPVPTPFSFLSDAIVLPQVSCYITHTNTKTHEIVRNNLHLAASCAS 271 Query: 266 DIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRT 325 + PRYCPSIE+K+ RF E HQ+FLEPEGL+++ VYPNG +T+ P ++Q + +R+ Sbjct: 272 LVDVAAPRYCPSIEEKVRRFPEHKSHQVFLEPEGLDSNSVYPNG-ATSCPIDVQLEMLRS 330 Query: 326 IPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVA 385 I GLE V ++R GY +EY++++P+EL TLETKKI GL+ AGQINGTTGYEEAA QG+VA Sbjct: 331 IRGLENVRMLRHGYTVEYNFVDPRELHHTLETKKIKGLYFAGQINGTTGYEEAAGQGIVA 390 Query: 386 GINSARK-SNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADN 444 G N+A S R+++YIGVMIDDL + G EPYR+FTSRAEYR+ LR DNAD Sbjct: 391 GANAALSLSQNHAPFVLKRSEAYIGVMIDDLVTLGTSEPYRLFTSRAEYRLRLRSDNADM 450 Query: 445 RLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTA 504 RLT +G G + ERR QE + L L +T LS I Q+G+ +TA Sbjct: 451 RLTEMGYNAGLVSERRFGVLYNKKQEMDRLVEELHRTSITPHTLSKCGIFISQNGEKKTA 510 Query: 505 YEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLI 564 +E L +P ++ L + P FS + + IE YA Y RQ + + EE I Sbjct: 511 FELLGHPSITMDILIQLWPSLNSFSRAALAAVGIEGKYAPYLQRQAADIQSFLEEENASI 570 Query: 565 PKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIK 614 P D YS + LS E +EKL +PF++ A +I G+TPAA+ ++I+++ Sbjct: 571 PADIRYSEVHGLSKEAQEKLQRAQPFSIGAARRIPGITPAAIANIIIHLR 620 >gi|255004518|ref|ZP_05279319.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Anaplasma marginale str. Virginia] Length = 627 Score = 540 bits (1391), Expect = e-151, Method: Compositional matrix adjust. Identities = 276/590 (46%), Positives = 372/590 (63%), Gaps = 7/590 (1%) Query: 31 TALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPA 90 T LITHK +IG MSCNPAIGG+ KG +VRE+DALDGLMG+ D A I +LN KGPA Sbjct: 29 TLLITHKIGSIGEMSCNPAIGGVAKGVVVREVDALDGLMGQAIDKASIHSTILNQSKGPA 88 Query: 91 VRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKN----IISSIVMQDNSMIR 146 V GPR QADR+ YR AMQ +L +NL+V++ V F+T+ ++S+ + ++ Sbjct: 89 VWGPRAQADRDAYRTAMQDIVLGYKNLEVLEASVIDFSTDNEAGSPCVASVTLSCGKVLH 148 Query: 147 CSTVVLTTGTFLRGVIHIGKLK-IPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLD 205 +VL TGTFL G+IH+G+ K IPAGRMGD PS L + F GRLKTGTP R+D Sbjct: 149 TRRLVLATGTFLGGMIHVGRDKGIPAGRMGDKPSTRLAKALCAHGFMLGRLKTGTPPRID 208 Query: 206 GKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSG 265 +I W T +Q D PFSF++D I Q+ C IT TN +TH I+ N+ +A + Sbjct: 209 RSSIDWSATAEQKGDPVPTPFSFLSDAIVLPQVSCYITHTNTKTHEIVRNNLHLAASCAS 268 Query: 266 DIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRT 325 + PRYCPSIE+K+ RF E HQ+FLEPEGL+++ VYPNG +T+ P ++Q + +R+ Sbjct: 269 LVDVAAPRYCPSIEEKVRRFPEHKSHQVFLEPEGLDSNSVYPNG-ATSCPIDVQLEMLRS 327 Query: 326 IPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVA 385 I GLE V ++R GY +EY++++P+EL TLETKKI GL+ AGQINGTTGYEEAA QG+VA Sbjct: 328 IRGLENVRMLRHGYTVEYNFVDPRELHHTLETKKIKGLYFAGQINGTTGYEEAAGQGIVA 387 Query: 386 GINSARK-SNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADN 444 G N+A S R+++YIGVMIDDL + G EPYR+FTSRAEYR+ LR DNAD Sbjct: 388 GANAALSLSQNHAPFVLKRSEAYIGVMIDDLVTLGTSEPYRLFTSRAEYRLRLRSDNADM 447 Query: 445 RLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTA 504 RLT +G G + ERR QE + L L +T LS I Q+G+ +TA Sbjct: 448 RLTEMGYNAGLVSERRFGVLYNKKQEMDRLVEELHRTSITPHTLSKCGIFISQNGEKKTA 507 Query: 505 YEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLI 564 +E L +P ++ L + P FS + + IE YA Y RQ + + EE I Sbjct: 508 FELLGHPSITMDILIQLWPSLNSFSRAALAAVGIEGKYAPYLQRQAADIQSFLEEENASI 567 Query: 565 PKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIK 614 P D YS + LS E +EKL +PF++ A +I G+TPAA+ ++I+++ Sbjct: 568 PADIRYSEVHGLSKEAQEKLQRAQPFSIGAARRIPGITPAAIANIIIHLR 617 >gi|294501986|ref|YP_003565686.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus megaterium QM B1551] gi|295707337|ref|YP_003600412.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus megaterium DSM 319] gi|294351923|gb|ADE72252.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus megaterium QM B1551] gi|294804996|gb|ADF42062.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus megaterium DSM 319] Length = 629 Score = 540 bits (1390), Expect = e-151, Method: Compositional matrix adjust. Identities = 276/619 (44%), Positives = 390/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDVIVIG GHAGCEAA +A++GA T +T + M CNP++GG KG +VREIDA Sbjct: 7 QYDVIVIGAGHAGCEAALASARMGAKTLTLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ M++ + ++ENL ++QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFAYQHEMKKTLENEENLTLMQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + +V Q ++ + TVV+TTGTFLRG I +G+LK +G P+ L Sbjct: 127 EQLIVEDGVCTGVVTQTGAVYKAKTVVITTGTFLRGEIILGELKYSSGPNNQQPAIKLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + D R KTGTP R++ TI + KTE Q D+ FS+ T + Q+ C +T Sbjct: 187 HLEELGLDMVRFKTGTPPRVNSSTIDYSKTEIQPGDDVPRAFSYETTQYITDQLPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ +TH+II +N+ S +YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSEQTHQIIDDNLHLSPMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE +Q Q + TIPGLEKV ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEHVQRQMLATIPGLEKVQMMRAGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+ R++ + + + R+D+YIGV++DDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLLAGINAGRRALEQEEVILGRSDAYIGVLVDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT IG +LG I + R +F + E + L S ++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEIGRELGLISDERYAKFEQKKAEIEQEKKRLFSFIIK 486 Query: 485 SKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 I K+ G + A + L P+ + ++ + P V E+++I+ Sbjct: 487 PNEAVQQLI--KEAGGSELKDGIRATDLLRRPEMTYTHIHQLAPADETVDPEVAEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + + +K E + IP DY ++ L+ E ++KL+ ++P + QAS+I Sbjct: 545 VKYEGYIQKSLQQVERLKKLENKKIPDYIDYDAINGLATEARQKLNQVRPLTVAQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 605 GVNPADISILLVYIEQGRI 623 >gi|238899345|ref|YP_002925028.1| glucose-inhibited cell-division protein [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259495847|sp|C4K911|MNMG_HAMD5 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|229467106|gb|ACQ68880.1| glucose-inhibited cell-division protein [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 627 Score = 540 bits (1390), Expect = e-151, Method: Compositional matrix adjust. Identities = 289/614 (47%), Positives = 394/614 (64%), Gaps = 5/614 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGH+G EAA +A++G T L+TH T+G +SCNPAIGG+GKG LV+EIDAL Sbjct: 7 FDVIVIGGGHSGTEAAMASARMGCKTLLLTHNIDTLGQLSCNPAIGGIGKGQLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLMG AD A IQ R+LN KGPAV+ R Q DR +YR ++ + +Q NL + Q V Sbjct: 67 GGLMGMAADKASIQSRILNASKGPAVKSTRVQLDRTVYRKVIRSALENQTNLSIFQQPVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + +++ V + ++VLT GTFL G IH+G AGR GD+ S SL + Sbjct: 127 DLILKNDLVVGAVTKMGLKFHAKSIVLTVGTFLDGKIHLGLENYSAGRAGDTASISLASQ 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 K GRLKTGTP R+D ++I + + Q D L FSF+ + Q C IT Sbjct: 187 LRKLPLRIGRLKTGTPPRIDARSINFKNLKIQLGDTPLPLFSFLGRQHPPLTQKPCHITY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH II +N++ S +Y G I GPRYCPSIEDKI+RF +R+ HQIFLEPEGL ++ Sbjct: 247 TNEKTHEIIQKNLERSPMYRGIIDGIGPRYCPSIEDKIIRFSDRSAHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q + +R+I G++ I+RPGYAIEYDY +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQLKIVRSIQGMKNAFIVRPGYAIEYDYFDPRDLKPTLESKHIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+ R + + R +YIGV++DDLT+ G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAGRLARGEEGWFPLRNQAYIGVLVDDLTTLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + E R RF + ++ + L+S+ + Sbjct: 427 RMFTSRAEYRLLLREDNADLRLTEIGYQLGLVDENRWCRFNQKVELIEQEKQRLRSIWIK 486 Query: 485 SKNLSSTSISFKQDGKTRTAYE-FLSYPDFSIQNLFSICPDARKF-SSLVIERLQIESSY 542 + + K T E L P+ + L S+ P ++ +++I+ Y Sbjct: 487 PNSDNQIDQIIKSPLSRETNGEDLLRRPEVNYSLLTSLKPFLPSLENNEAGMQVEIQIKY 546 Query: 543 AAYTGRQMIE-AKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y RQ E AK+++ E L+P FDYS + LSNE+ KL+ KP +L QAS+I G+ Sbjct: 547 EGYIVRQKEEIAKQLR-NENTLLPLSFDYSLISGLSNEVVSKLNDHKPISLGQASRISGI 605 Query: 602 TPAALNLLLIYIKK 615 TPAA+++LL+++KK Sbjct: 606 TPAAISILLVWLKK 619 >gi|239501427|ref|ZP_04660737.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Acinetobacter baumannii AB900] Length = 626 Score = 540 bits (1390), Expect = e-151, Method: Compositional matrix adjust. Identities = 290/619 (46%), Positives = 389/619 (62%), Gaps = 6/619 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GK HLVREID Sbjct: 5 KVYDVIVIGGGHAGTEAALAAARMGRQTLLLTHNIETLGQMSCNPAIGGIGKSHLVREID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M AD GIQFR+LN +KG AVR R QADR Y+ A++ + +Q NLD+ Q Sbjct: 65 ALGGAMALAADKGGIQFRILNSRKGAAVRATRAQADRVRYKAAIRETLENQANLDIFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 E + + +V Q TVVLTTGTFL GVIH+G K GR GD PS +L Sbjct: 125 ADDLIVEGDTVKGVVTQMGIRFDAKTVVLTTGTFLGGVIHVGLEKSSGGRAGDPPSIALA 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + GRLKTGTP R+D +++ + Q D SFM D + Q+ C I Sbjct: 185 QRLRELKLPVGRLKTGTPPRIDARSVDFSVMTPQPGDFPSPVMSFMGDVSMHPEQVNCYI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II + S +Y+G I+ GPRYCPSIEDKI RF +++ HQ+FLEPEGL+T Sbjct: 245 THTNEKTHEIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFSDKDSHQVFLEPEGLDT 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNGIST+LP ++Q + +R+I G+E +I+RPGYAIEYDY NP+ L TLETK I+G Sbjct: 305 HELYPNGISTSLPFDVQFELVRSIRGMENAHILRPGYAIEYDYFNPQALKFTLETKAING 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQINGTTGYEEA AQGL+AG+N+AR++ + + R +Y+GV++DDL + G E Sbjct: 365 LYFAGQINGTTGYEEAGAQGLLAGLNAARRAWEQEEWTPKRDQAYMGVLVDDLITLGTKE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT IG +LG + + R + + ++ S L+ L Sbjct: 425 PYRMFTSRAEYRLMLREDNADQRLTTIGRELGLVDDVRWAAYCEKMEAVERETSRLQHLW 484 Query: 483 LTSKNLSS---TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 N ++ K +A + L P+ + + + + S V E+++I Sbjct: 485 AAPNNPMGKKFVEMTGADLSKECSAIDLLKRPNINFGQIAELT--GSEVSQQVGEQIEIA 542 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ + ++K E+ IP DFDY + LS E+ +KL ++P L QAS+I Sbjct: 543 VKYEGYINRQHEDVAQLKRLEETKIPADFDYDVVSGLSREITQKLKTVRPETLAQASRIP 602 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+TPAA+ L++I I+KN + Sbjct: 603 GVTPAAVQLVMITIRKNNM 621 >gi|212640676|ref|YP_002317196.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Anoxybacillus flavithermus WK1] gi|259495844|sp|B7GMV9|MNMG_ANOFW RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|212562156|gb|ACJ35211.1| Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme, GidA [Anoxybacillus flavithermus WK1] Length = 638 Score = 540 bits (1390), Expect = e-151, Method: Compositional matrix adjust. Identities = 285/619 (46%), Positives = 395/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+G GHAGCEAA AA++GAST +IT I M CNP+IGG KG +VREIDA Sbjct: 16 SYDVIVVGAGHAGCEAALAAARMGASTLVITLNLDMIAFMPCNPSIGGPAKGIVVREIDA 75 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ R+LN KGPAVR R QAD+ LY+ M++ + +QENL ++QG+V Sbjct: 76 LGGEMGKNIDKTHIQMRMLNTGKGPAVRALRAQADKFLYQQEMKKTLENQENLTLLQGKV 135 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ + VV+TTGTFLRG I IG +K +G PS L Sbjct: 136 EKLIVEDGVCKGVITHTGARYYAKAVVITTGTFLRGEIIIGDIKYSSGPNNQQPSIKLSE 195 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F+ R KTGTP R++ TI + KTE Q D+ FS+ T + Q+ C +T Sbjct: 196 HLEELGFELVRFKTGTPPRVNSHTIDYSKTEIQPGDDVPRAFSYETKQYITDQLPCWLTY 255 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETHRII EN+ S +YSG IK GPRYCPSIEDKIVRF ++ HQIFLEPEG +T Sbjct: 256 TTEETHRIIDENLHLSPMYSGMIKGTGPRYCPSIEDKIVRFHDKPRHQIFLEPEGRHTQE 315 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE IQ Q + TIPGLEK ++R GYAIEYD I P +L+PTLETK + L+ Sbjct: 316 VYVQGLSTSLPEHIQRQMLATIPGLEKAQLMRAGYAIEYDAIVPTQLWPTLETKVVQRLY 375 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A K+ + + SR+++YIGV+IDDL +KG EPY Sbjct: 376 TAGQINGTSGYEEAAGQGLIAGINAACKALGKEELILSRSEAYIGVLIDDLVTKGTNEPY 435 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL- 483 R+ TSRAEYR+ LR DNAD RLT IG K+G I + R ++F + + LKS ++ Sbjct: 436 RLLTSRAEYRLLLRHDNADLRLTEIGYKIGLISQERYEKFVAKKEAIEAEKKRLKSYIIK 495 Query: 484 ----TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + S +DG R A + L P+ + +++ I P + V E+++I+ Sbjct: 496 PTPQVQQLIRDVGGSELKDG-IRAA-DLLKRPEMTYEHIQMIAPAEQPIDPEVAEQVEIQ 553 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + +++K E + IP+D DY ++ L+ E ++KL ++P ++ QAS+I Sbjct: 554 IKYEGYIEKSLQQVEKLKKMENKKIPEDIDYDAITGLATEARQKLKQVRPLSIAQASRIS 613 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+Y+++ + Sbjct: 614 GVNPADISILLVYLEQGKI 632 >gi|322437302|ref|YP_004219514.1| glucose inhibited division protein A [Acidobacterium sp. MP5ACTX9] gi|321165029|gb|ADW70734.1| glucose inhibited division protein A [Acidobacterium sp. MP5ACTX9] Length = 672 Score = 540 bits (1390), Expect = e-151, Method: Compositional matrix adjust. Identities = 287/669 (42%), Positives = 395/669 (59%), Gaps = 49/669 (7%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + YDV+V+G GHAGCEAA +A++G TAL T + MSCNPA+GG+ KGHLVRE Sbjct: 3 VTEQYDVVVVGAGHAGCEAAVASARMGLRTALFTLNLDLVAQMSCNPAVGGIAKGHLVRE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 ID+L G+MG +AD+AGIQFR+LN +GPAV PR Q D+ LYR+ M+ + +Q NL + Q Sbjct: 63 IDSLGGIMGLIADSAGIQFRLLNTSRGPAVWSPRAQCDKALYRVRMKELLENQPNLHLKQ 122 Query: 122 GEVAGFNTEKN---------------------IISSIVMQDNSMIRCSTVVLTTGTFLRG 160 EV E I + ++D I + ++TTGTFL G Sbjct: 123 AEVVDVLIEGPGRREQGSAAAYPDPCSLIPVPCIRGLKLRDGREIHAAATIITTGTFLNG 182 Query: 161 VIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFAD 220 +IH G+ + AGR G+ S L S + RLKTGTP RLDG+TI W + +Q D Sbjct: 183 LIHCGEQQYSAGRSGEPASVLLGESLKRLGLRETRLKTGTPPRLDGRTIDWSQFPEQPGD 242 Query: 221 ERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIED 280 PFS T ++ RQI C I T+ ET +I EN S +Y+G I++ GPRYCPSIED Sbjct: 243 PEPTPFSLRTRELPLRQISCHIAHTSPETMWLIRENAHRSPMYTGQIEAIGPRYCPSIED 302 Query: 281 KIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYA 340 KIVRF ++ HQ FLEPEGL T VY NG+ST+LP+EIQ Q + +IPGLE ++RPGYA Sbjct: 303 KIVRFPDKPRHQFFLEPEGLTTHEVYINGMSTSLPQEIQLQMVHSIPGLENTVMLRPGYA 362 Query: 341 IEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINS------ARKSN 394 IEYD I+P EL +L K GL+LAGQINGT+GYEEAAAQGL+AGIN+ AR Sbjct: 363 IEYDAIDPTELDRSLRVKSYEGLYLAGQINGTSGYEEAAAQGLMAGINAALSVKRARGDA 422 Query: 395 KLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLG 454 + RT++YIG++IDDL SKG EPYRMFTSRAE+R+ LR DNAD RLTP G +LG Sbjct: 423 SAEPFHLDRTEAYIGILIDDLISKGTDEPYRMFTSRAEFRLHLRIDNADRRLTPHGHRLG 482 Query: 455 CIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEF------- 507 IG+ + ++LL++ L ++ + + + G + F Sbjct: 483 LIGDENWADYEARQHRAAAFKTLLETTRLNAREIPADLYAKLLAGSAQGVDSFAGVLLSD 542 Query: 508 -LSYPDFSIQN------------LFSICPDARKFSSLVIERLQIESS--YAAYTGRQMIE 552 L PD I++ +F+ D + ER +E+ YA Y +Q+ Sbjct: 543 LLKRPDLVIEDFVPLLTEALAAPIFTAWQDETFPARTRNERRAVETEIKYAGYLSQQLRS 602 Query: 553 AKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIY 612 ++K E IP FDY+++ LS E+++ ++P L QAS++ G+TPAA++L+ +Y Sbjct: 603 IGKMKQAESTRIPPTFDYTTISGLSREMQQTFQRVRPLTLGQASRLPGVTPAAVSLVHVY 662 Query: 613 IKKNTVKLN 621 ++ + +L Sbjct: 663 LEIQSRRLT 671 >gi|205831496|sp|A3M6R5|MNMG_ACIBT RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|193077747|gb|ABO12609.2| glucose-inhibited division protein A [Acinetobacter baumannii ATCC 17978] Length = 626 Score = 539 bits (1389), Expect = e-151, Method: Compositional matrix adjust. Identities = 290/619 (46%), Positives = 389/619 (62%), Gaps = 6/619 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GK HLVREID Sbjct: 5 KVYDVIVIGGGHAGTEAALAAARMGRQTLLLTHNIETLGQMSCNPAIGGIGKSHLVREID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M AD GIQFR+LN +KG AVR R QADR Y+ A++ + +Q NLD+ Q Sbjct: 65 ALGGAMALAADKGGIQFRILNSRKGAAVRATRAQADRVRYKAAIRETLENQANLDIFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 E + + +V Q TVVLTTGTFL GVIH+G K GR GD PS +L Sbjct: 125 ADDLIVEGDTVKGVVTQMGIRFDAKTVVLTTGTFLGGVIHVGLEKSSGGRAGDPPSIALA 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + GRLKTGTP R+D +++ + Q D SFM D + Q+ C I Sbjct: 185 QRLRELKLPVGRLKTGTPPRIDARSVDFSVMTPQPGDFPSPVMSFMGDVSMHPEQVNCYI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II + S +Y+G I+ GPRYCPSIEDKI RF +++ HQ+FLEPEGL+T Sbjct: 245 THTNEKTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFSDKDSHQVFLEPEGLDT 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNGIST+LP ++Q + +R+I G+E +I+RPGYAIEYDY NP+ L TLETK I+G Sbjct: 305 HELYPNGISTSLPFDVQFELVRSIRGMENAHILRPGYAIEYDYFNPQALKFTLETKAING 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQINGTTGYEEA AQGL+AG+N+AR++ + + R +Y+GV++DDL + G E Sbjct: 365 LYFAGQINGTTGYEEAGAQGLLAGLNAARRAWEQEEWTPKRDQAYMGVLVDDLITLGTKE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT IG +LG + + R + + ++ S L+ L Sbjct: 425 PYRMFTSRAEYRLMLREDNADQRLTTIGRELGLVDDVRWAAYCEKMEAVERETSRLQHLW 484 Query: 483 LTSKNLSS---TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 N ++ K +A + L P+ + + + + S V E+++I Sbjct: 485 AAPNNPMGKKFVEMTGADLSKECSAIDLLKRPNINFSQIAELT--GSEVSQQVGEQIEIA 542 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ + ++K E+ IP DFDY + LS E+ +KL ++P L QAS+I Sbjct: 543 VKYEGYINRQHEDVAQLKRLEETKIPADFDYDVVSGLSREITQKLKTVRPETLAQASRIP 602 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+TPAA+ L++I I+KN + Sbjct: 603 GVTPAAVQLVMITIRKNNM 621 >gi|166714098|ref|ZP_02245305.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Xanthomonas oryzae pv. oryzicola BLS256] Length = 634 Score = 539 bits (1389), Expect = e-151, Method: Compositional matrix adjust. Identities = 283/620 (45%), Positives = 385/620 (62%), Gaps = 10/620 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAG EAA +A+ GA T L+TH T+G+MSCNPAIGG+GKGHLV+EIDAL Sbjct: 8 YDVIVIGGGHAGTEAALASARAGARTLLLTHTIETVGAMSCNPAIGGIGKGHLVKEIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M AD AGIQ+R LN KGPAVR R QADR LYR A++ + +Q L V Q V Sbjct: 68 GGAMAHAADLAGIQWRTLNASKGPAVRATRCQADRNLYRTAIRCIVQAQPKLTVFQAAVD 127 Query: 126 GF-----NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 E + + ++ Q +VVLT GTFL G IH+G + AGRMGD P+ Sbjct: 128 DLIIHNGTCEADSVRGVITQTGLRFEAPSVVLTAGTFLAGKIHVGDTQYAAGRMGDPPAT 187 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + F RLKTGTP R+DG+T+ + +Q D+ L SFM + RQ+ Sbjct: 188 TLAARLRERPFAIDRLKTGTPPRIDGRTLDYGVMGEQPGDDPLPVMSFMGQVSDHPRQVS 247 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT+T +TH II + S +YSG I+ GPRYCPSIEDK+VRF E+ HQIF+EPEG Sbjct: 248 CWITQTTAQTHDIIRNALHRSPLYSGQIEGIGPRYCPSIEDKVVRFAEKTSHQIFVEPEG 307 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L+ +YPNGIST+LP ++Q +R+I G + +I RPGYAIEYD+ +P+ L +LETK Sbjct: 308 LDVAEIYPNGISTSLPFDVQLALVRSIHGFAQAHITRPGYAIEYDFFDPRGLKASLETKA 367 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 + GLF AGQINGTTGYEEAAAQGL+AG+N+AR L R ++Y+GV++DDL + G Sbjct: 368 VGGLFFAGQINGTTGYEEAAAQGLLAGLNAARHVQGLPAWSPRRDEAYLGVLVDDLITHG 427 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT G ++G + + R RF+ + + L Sbjct: 428 TTEPYRMFTSRAEYRLQLREDNADARLTGAGREMGLVDDARWARFSAKQEAVQRETARLS 487 Query: 480 SLVLTSKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIER 535 +L T N ++ + + + P+ + L + + V E+ Sbjct: 488 ALWATPGNALGREVADALGVTVSRETNVLDLIKRPELNYATLMRVPTLGSGVDDAQVAEQ 547 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I YA Y RQ + + E IP+ FDY+ + LS E+++KL ++P ++ QA Sbjct: 548 VEISVKYAGYLDRQRDDIARQQRHETTPIPEGFDYAGVRGLSIEVQQKLERVRPQHIGQA 607 Query: 596 SKIEGMTPAALNLLLIYIKK 615 +I GMTPAA++LLL+++++ Sbjct: 608 QRIPGMTPAAISLLLVHLER 627 >gi|167038668|ref|YP_001666246.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167041018|ref|YP_001664003.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Thermoanaerobacter sp. X514] gi|256751461|ref|ZP_05492339.1| glucose inhibited division protein A [Thermoanaerobacter ethanolicus CCSD1] gi|300913771|ref|ZP_07131088.1| glucose inhibited division protein A [Thermoanaerobacter sp. X561] gi|307725543|ref|YP_003905294.1| glucose inhibited division protein A [Thermoanaerobacter sp. X513] gi|320117060|ref|YP_004187219.1| glucose inhibited division protein A [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|205831567|sp|B0K8H8|MNMG_THEP3 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|205831568|sp|B0K5N3|MNMG_THEPX RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|166855258|gb|ABY93667.1| glucose inhibited division protein A [Thermoanaerobacter sp. X514] gi|166857502|gb|ABY95910.1| glucose inhibited division protein A [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256749680|gb|EEU62706.1| glucose inhibited division protein A [Thermoanaerobacter ethanolicus CCSD1] gi|300890456|gb|EFK85601.1| glucose inhibited division protein A [Thermoanaerobacter sp. X561] gi|307582604|gb|ADN56003.1| glucose inhibited division protein A [Thermoanaerobacter sp. X513] gi|319930151|gb|ADV80836.1| glucose inhibited division protein A [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 633 Score = 539 bits (1389), Expect = e-151, Method: Compositional matrix adjust. Identities = 284/619 (45%), Positives = 392/619 (63%), Gaps = 14/619 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV V+G GHAG EAA A+LG T +I M+CNP+IGG K LVREIDAL Sbjct: 8 YDVAVVGLGHAGSEAALACARLGLKTVGFAVNLDSIALMACNPSIGGPAKAQLVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D + +Q R LN KGPAVR R Q D++LY++ M+ + QENLD+ Q E+ Sbjct: 68 GGEMAINTDKSLLQIRTLNTSKGPAVRSLRAQVDKKLYQMNMKYTLERQENLDIKQAEIV 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E N ++ +V + ++ +C ++TTGTFL+G + IG + +G G P+N L + Sbjct: 128 DILVEDNKVTGVVTKLGAIYKCKACIITTGTFLKGRVIIGDVSFDSGPSGLFPANQLSET 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + F R KTGTPAR+D ++I + K E Q DE + PFS+M DKI Q+ C +T T Sbjct: 188 LKRLGFKLMRFKTGTPARVDKRSIDFSKMEIQPGDEVITPFSYMHDKIEIEQLPCWLTYT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N TH IIM NI S ++SG+I G RYCPSIEDK+V+F + HQIF+EPEGLNT + Sbjct: 248 NKRTHEIIMANIHRSPLFSGEITGVGVRYCPSIEDKVVKFPHKERHQIFIEPEGLNTYEM 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+S++LPE++Q +F+RT+PGLE V ++RP YAIEYD I+P +L TLE+KKI GL+ Sbjct: 308 YVQGMSSSLPEDVQLEFLRTVPGLENVRVMRPAYAIEYDCIDPTQLKATLESKKIEGLYF 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ+NGT+GYEEAAAQGL+AGIN+A K + R+ +YIGV+IDDL +KG EPYR Sbjct: 368 AGQVNGTSGYEEAAAQGLMAGINAAMKLLNKPSVILDRSQAYIGVLIDDLVTKGTNEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF-AKYIQEYNFLRSLLKSLVLT 484 M TSRAEYR+ LR DNAD RLT +G K+G + E R ++F K IQ +R LL ++ Sbjct: 428 MLTSRAEYRLLLRQDNADFRLTELGYKIGLVTEERYQKFLKKKIQLEKEMRRLLGVMIKP 487 Query: 485 SKNLSSTSISFKQDGKTRTA-----YEFLSYPDF---SIQNLFSICPDARKFSSLVIERL 536 S+ +++ IS G T Y L P+ S + L PD V E++ Sbjct: 488 SEEVNNFLIS---KGSTPLVTGVDLYTLLKRPEIDYKSTKFLDKNRPD--DILDSVAEQI 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 I Y Y +Q+ + + K E + IP+D DY + LSNE KEKL+ ++P ++ QAS Sbjct: 543 DINIKYEGYIMKQLRQVEHFKALENKKIPEDIDYYQIHGLSNEAKEKLTKIRPTSIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKK 615 +I G++PA +++LLIY+++ Sbjct: 603 RISGVSPADISVLLIYMQQ 621 >gi|172059048|ref|YP_001815508.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Exiguobacterium sibiricum 255-15] gi|205831509|sp|B1YGA7|MNMG_EXIS2 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|171991569|gb|ACB62491.1| glucose inhibited division protein A [Exiguobacterium sibiricum 255-15] Length = 628 Score = 539 bits (1389), Expect = e-151, Method: Compositional matrix adjust. Identities = 277/619 (44%), Positives = 388/619 (62%), Gaps = 3/619 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIG GHAG EA+ AA++G+ T ++T +G M CNP+IGG KG +VREIDAL Sbjct: 8 FDVIVIGAGHAGIEASLAAARMGSKTVMLTMNPDMVGFMYCNPSIGGPAKGIVVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M R DA IQ ++LN KGPAVR R QAD+ Y+ M++ + + NL + Q V Sbjct: 68 GGEMARAIDATYIQMKMLNTSKGPAVRALRAQADKFEYQNRMKKALEDEPNLLLRQALVE 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + +V + R V++TTGTF+RG I IG+L +G PS +L Sbjct: 128 RLIIEDDTCVGVVTNTGAEYRAKAVIITTGTFMRGKIIIGELSYESGPNNQMPSVNLSKH 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + F+ R KTGTP R+DGKTI + KTE Q D +PFS T ++ QI C +T T Sbjct: 188 LEELGFELARFKTGTPPRIDGKTIDYSKTEIQPGDAVALPFSHETTQMITEQIPCWLTYT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 TH++I N+ S ++SG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG +T+ V Sbjct: 248 TEYTHQLIDANLHRSPMFSGMIKGTGPRYCPSIEDKVVRFSDKPRHQIFLEPEGRDTEEV 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+ST+LPE++QH +R+IPGLEK ++RPGYAIEYD + P +L+PTLETK+I+GLF Sbjct: 308 YVQGLSTSLPEDVQHDILRSIPGLEKSEMMRPGYAIEYDAVVPTQLWPTLETKRIAGLFT 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGT+GYEEAA QG++AGIN+A K + D + SR+ YIGVMIDDL +KG EPYR Sbjct: 368 AGQINGTSGYEEAAGQGIMAGINAALKVQERDPLILSRSQGYIGVMIDDLVTKGTNEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 + TSRAEYR+ LR DNAD RL+ IG LG I E R + A+ ++ L+ +V+ + Sbjct: 428 LLTSRAEYRLLLRHDNADLRLSDIGYDLGLINETRHAKLAEKKEDIQREMKRLEKVVIKA 487 Query: 486 K---NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSY 542 N T I + A L P+ + + + P S E+++I+ Y Sbjct: 488 TSEVNERLTEIGVSPLKEALHAITLLKRPEITYAMIADMTPPPVALSEEAAEQVEIQVKY 547 Query: 543 AAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMT 602 A Y +Q+ + + + EK+ IP+ DY + L+ E K+KL+ ++P ++ QAS+I G+ Sbjct: 548 AGYIDKQLDQVERMMRMEKKRIPERLDYDVISGLAIEAKQKLNQVRPLSIGQASRISGVN 607 Query: 603 PAALNLLLIYIKKNTVKLN 621 P+ +++LL+YI++ L Sbjct: 608 PSDISILLVYIEQGQYALT 626 >gi|149247916|ref|XP_001528345.1| hypothetical protein LELG_00865 [Lodderomyces elongisporus NRRL YB-4239] gi|146448299|gb|EDK42687.1| hypothetical protein LELG_00865 [Lodderomyces elongisporus NRRL YB-4239] Length = 691 Score = 539 bits (1389), Expect = e-151, Method: Compositional matrix adjust. Identities = 276/640 (43%), Positives = 398/640 (62%), Gaps = 35/640 (5%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++ VIVIGGGHAGCEAA +A+ GA T LIT S IG+ SCNP++GG+GKG L+RE+DA Sbjct: 42 NHPVIVIGGGHAGCEAATGSARSGAKTTLITPDISKIGTASCNPSMGGVGKGTLLREVDA 101 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDG+ R+ D AGI FR+LN +G AV GPR Q DR++Y MQ+EIL+ +NL +++ +V Sbjct: 102 LDGVSARITDKAGIHFRILNASRGAAVHGPRAQIDRKIYLTEMQKEILNYQNLSIVESQV 161 Query: 125 AGFNTEKN-----------IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGR 173 E + + +++ + +++C +V+TTGTFL G IHIG PAGR Sbjct: 162 KDIIIEPDSTKDQSGRDLGTVRGVILDNGQILKCDKIVVTTGTFLGGEIHIGLTAFPAGR 221 Query: 174 MGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI 233 MG+ + L ++F F GRLKTGTP RL KTI + +Q +D P SFM D + Sbjct: 222 MGEKATFGLSDTFRGAGFKLGRLKTGTPPRLSSKTIDYTNLLEQPSDVPPQPMSFMNDNV 281 Query: 234 T--NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGH 291 N+ ++C T+T E H ++ N+ S +K GPRYCPSIE K+++F ++ H Sbjct: 282 ALENQLVKCHQTQTTPEFHSLVANNLDKSIHIRETVK--GPRYCPSIESKVIKFPQKQSH 339 Query: 292 QIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKEL 351 ++LEPEG +TD+VYPNGIS +PEEIQ Q ++ +PG E V +++PGY +EYDYI+P+EL Sbjct: 340 IVWLEPEGFDTDLVYPNGISCTMPEEIQEQLVKMMPGCENVKMVQPGYGVEYDYIDPREL 399 Query: 352 FPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 TLETK + GL+LAGQINGTTGYEEAAAQG +AGIN+ S K+ + R+D Y+GV+ Sbjct: 400 TNTLETKLVKGLYLAGQINGTTGYEEAAAQGCIAGINAGLSSQKMKEMRLQRSDGYVGVL 459 Query: 412 IDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEY 471 IDDL +KG+ EPYRMFTSR+E+R+SLR DNAD RLT +G KLG +GE R + FA ++ Sbjct: 460 IDDLITKGIEEPYRMFTSRSEFRVSLRADNADKRLTELGYKLGVVGETRYRHFANEMEIM 519 Query: 472 NFLRSLLKSLVLTSKNLSSTSISFKQDGKTRT---AYEFLSYPDFSIQNLFSICPDARKF 528 ++ L+ L LT + D + + ++ LSY SI +L P KF Sbjct: 520 QNIKDHLQGLRLTGATWLPALNGHRTDVRPESRVDGWKLLSYSGVSILDLL---PHMSKF 576 Query: 529 ------------SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPAL 576 S+ ++ R+ +ES Y + ++ K +E L+P +F+Y++ L Sbjct: 577 TGGEVPSYYKNLSNRLVTRIDVESDYEPFISKEQTHLNAYKADENLLLPTNFNYTNTGNL 636 Query: 577 --SNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIK 614 S+E L+ ++P + QA +I+G+ P + LL ++ Sbjct: 637 KISHEACTILNTIQPRTIGQARRIQGINPTTIFELLKLVR 676 >gi|91203577|emb|CAJ71230.1| similar to putative glucose inhibited division protein A [Candidatus Kuenenia stuttgartiensis] Length = 604 Score = 539 bits (1389), Expect = e-151, Method: Compositional matrix adjust. Identities = 279/616 (45%), Positives = 394/616 (63%), Gaps = 18/616 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 ++ +DVIV+G GHAGCEAA +A++G +TAL++ T+ MSCNPAIGG+ KG LVRE Sbjct: 1 MHTEFDVIVVGAGHAGCEAALASARMGLNTALLSINLDTVAQMSCNPAIGGIAKGQLVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M +V DA GIQFR+LN KKGPAV PR QAD++ Y++ M++ + Q+NL + Q Sbjct: 61 IDALGGEMAQVIDATGIQFRMLNTKKGPAVHSPRAQADKKAYQITMKKRLEHQDNLFMKQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G N + +V Q + V+LTTGTFL+GVIHIG GR+G+ S Sbjct: 121 EIADGLIVVDNKAAGVVGQSGLQYKSKAVILTTGTFLKGVIHIGNYITSGGRIGELSSER 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L S + RLKTGT RL+ +TI + + Q DE PFSF T ++ Q+ C Sbjct: 181 LSGSLRDLGLEVQRLKTGTSPRLNSRTINYKNLKPQHGDENPRPFSFSTKTLSGAQVPCY 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT TN TH I+M N+ + +Y+G I + GPRYCPS+EDKIVRF ++ HQIFLEPEGL+ Sbjct: 241 ITYTNQTTHEIVMSNLNRAPLYTGQISTTGPRYCPSLEDKIVRFPDKLQHQIFLEPEGLD 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T +Y NGIST++P ++Q + + +I GLE I+R GYAIEYD++ P +L +LETK + Sbjct: 301 TLEIYCNGISTSMPHDVQERIVHSIEGLEAAEIVRYGYAIEYDFVPPTQLKLSLETKAVE 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 L+LAGQINGT+GYEEAAAQG++AGIN+A K ++ + R+++YIGV+IDDL +KG Sbjct: 361 NLYLAGQINGTSGYEEAAAQGIMAGINAALKIHEKEPFILDRSEAYIGVLIDDLVTKGTE 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+FTSRAEYR+ LR DNAD RL G K G I + Q+++ L+ + Sbjct: 421 EPYRLFTSRAEYRLLLRQDNADRRLMKYGHKYGLISD----------QQWSTLQEKER-- 468 Query: 482 VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPD--ARKFSSLVIERLQIE 539 L ++ L+ +++K G+ A + LS P+ + L I + + V E+++IE Sbjct: 469 -LIAETLA--YLNYKTAGQDALA-KILSRPEQTFDQLLGIDSELAEKNVPGDVQEQVEIE 524 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ + ++ K E IP DYS + L E ++KLS ++P +L QAS+I Sbjct: 525 IKYKGYIERQYSQIEKFKKMENHKIPDWLDYSHITELRREARQKLSQIRPLSLGQASRIS 584 Query: 600 GMTPAALNLLLIYIKK 615 G++PA +++L+IY+ K Sbjct: 585 GVSPADISILMIYLAK 600 >gi|27904514|ref|NP_777640.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|29611719|sp|P59485|MNMG_BUCBP RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|27903911|gb|AAO26745.1| glucose inhibited division protein [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 626 Score = 539 bits (1389), Expect = e-151, Method: Compositional matrix adjust. Identities = 298/624 (47%), Positives = 401/624 (64%), Gaps = 19/624 (3%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 +++DVI++GGGHAG EAA +++ T L+T +TIG++SCNPAIGG+GK HLV+E+D Sbjct: 5 QNFDVIIVGGGHAGTEAALACSRMKKKTLLLTQNINTIGALSCNPAIGGIGKSHLVKEVD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G+M + D +GIQFR+LN KKG AVR R QADR+LY +++ +L QENL V+Q E Sbjct: 65 ALGGIMAKAIDKSGIQFRILNSKKGFAVRSTRAQADRKLYSQTIKKTLLFQENLLVLQAE 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V I ++ Q VVLTTGTFL G I+IG GR+ D S +L Sbjct: 125 VDDVIVSNYKIMGVITQTKIKFFSKAVVLTTGTFLGGKIYIGSKCFLGGRINDYSSINLA 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGI 242 GRLKTGTP R++ TI + K + Q++D L FSFM ++ + RQI C I Sbjct: 185 QRLKDLPIKIGRLKTGTPPRINKHTINFSKLDVQYSDNPLPIFSFMGNQKEHPRQIPCYI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH I+ +N+K S IYSG I GPRYCPSIEDKIVRF +RN HQIFLEPEGL+ Sbjct: 245 TATNEKTHEIVRKNLKKSPIYSGLITGIGPRYCPSIEDKIVRFSDRNAHQIFLEPEGLHD 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNGIST+LPE++Q + I +I GLE+ I RPGYA+EYDY +P+ L TLE+K I G Sbjct: 305 IEIYPNGISTSLPEDVQVEMIHSIKGLERAQITRPGYAVEYDYCDPRTLKLTLESKFIEG 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGIN-SARKSNKLDCICF-SRTDSYIGVMIDDLTSKGV 420 FLAGQINGTTGYEEAAAQGL+AG+N S SNK C F +R +Y+GV+IDDL +KG Sbjct: 365 FFLAGQINGTTGYEEAAAQGLLAGLNASLYASNK--CGWFPNRGQAYLGVLIDDLCTKGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFT+RAE+R+ LR DNAD RLT I + I R R+ + + + L++ Sbjct: 423 KEPYRMFTARAEHRLILREDNADLRLTNIAKSMNLIDNSRWTRYVEKLSNIKNETTRLEN 482 Query: 481 LVLTSKNLSSTSI----SFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV---- 532 L + SK S T + S K + ++ TA + L P+ + L +KFS + Sbjct: 483 LKIRSKLYSITELNNFFSIKINTES-TAKDLLKRPEINYSTLMLF----KKFSPGIKDKE 537 Query: 533 -IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 E+++I+ Y Y RQ+ K + ++ K +Y + LSNE+ KL+ KP++ Sbjct: 538 AYEQIEIQEKYCGYIKRQIKAIKNQLNNDYIVLSKIKNYKVVKGLSNEVVSKLNFYKPYS 597 Query: 592 LLQASKIEGMTPAALNLLLIYIKK 615 L QAS+I G+TPAA+++LLIY+KK Sbjct: 598 LGQASRISGITPAAISILLIYLKK 621 >gi|228474143|ref|ZP_04058880.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus hominis SK119] gi|314935197|ref|ZP_07842550.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus hominis subsp. hominis C80] gi|228271838|gb|EEK13175.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus hominis SK119] gi|313656532|gb|EFS20271.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus hominis subsp. hominis C80] Length = 625 Score = 539 bits (1389), Expect = e-151, Method: Compositional matrix adjust. Identities = 279/619 (45%), Positives = 389/619 (62%), Gaps = 3/619 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VREID Sbjct: 3 QEYDVIVIGAGHAGIEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVREID 62 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R I ++NLD++QG Sbjct: 63 ALGGQMAKAIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEDNLDIMQGM 122 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + + + + VV+TTGTFLRG I +G +K +G PS SL Sbjct: 123 VDELLIENDEVKGVRTNIGTEYHAKAVVITTGTFLRGEIILGNMKYSSGPNHQLPSISLA 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 ++ + F+ R KTGTP R++ KTI + KTE Q D+ FSF T + Q+ C +T Sbjct: 183 DNLRELGFEVVRFKTGTPPRVNSKTIDYSKTEIQPGDDVGRAFSFETTEYILDQLPCWLT 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG NT+ Sbjct: 243 YTNDRTHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRNTN 302 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETK I L Sbjct: 303 EVYVQGLSTSLPEHVQRQMLATIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKMIKNL 362 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGT+GYEEAA QG++AGIN+A SR+D+YIGV+IDDL +KG EP Sbjct: 363 YTAGQINGTSGYEEAAGQGIMAGINAAGNVLGTGEKILSRSDAYIGVLIDDLVTKGTNEP 422 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT IG LG I E R RF Q+ L ++ + Sbjct: 423 YRLLTSRAEYRLLLRHDNADLRLTDIGYDLGMISEERYARFNDKRQQIQDEIDRLSNIRI 482 Query: 484 TSKNLSSTSISFKQDGKTRT---AYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + + I + + A + L P+ + + I + + V E+++I++ Sbjct: 483 KPNEHTQSVIEAHGGSRLKDGILAIDLLRRPEMTYNTILEILEETHQLPEAVEEQVEIQT 542 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y + + + +++K E++ IP+D DYS + +L+ E +EKLS +KP N+ QAS+I G Sbjct: 543 KYEGYINKSLQQVEKVKRMEEKKIPEDLDYSKVDSLATEAREKLSEVKPLNIAQASRISG 602 Query: 601 MTPAALNLLLIYIKKNTVK 619 + PA +++LL+Y+++ ++ Sbjct: 603 VNPADISILLVYLEQGKLQ 621 >gi|196234360|ref|ZP_03133188.1| glucose inhibited division protein A [Chthoniobacter flavus Ellin428] gi|196221552|gb|EDY16094.1| glucose inhibited division protein A [Chthoniobacter flavus Ellin428] Length = 617 Score = 539 bits (1389), Expect = e-151, Method: Compositional matrix adjust. Identities = 283/632 (44%), Positives = 390/632 (61%), Gaps = 41/632 (6%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIG GHAG EAA AA+LG T ++T ++G MSCNPAIGG KG +VREID Sbjct: 6 KKYDVIVIGAGHAGIEAAMAAARLGCETLMLTQNLDSVGQMSCNPAIGGQAKGQMVREID 65 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G+MG DA IQFR+LN KGP+VR PR Q D++ Y+ + + Q +LD+ QG Sbjct: 66 ALGGVMGLNTDATSIQFRMLNSGKGPSVRSPRAQCDKKAYQFRAKAVLERQPHLDLKQGN 125 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V TE + + +VV+TTGTF+RG++H+G GRMGDS S +L Sbjct: 126 VTRILTEGGHACGVETNLGLRVLGRSVVVTTGTFMRGLLHVGLQNQSGGRMGDSFS-TLS 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR------- 236 +S + F+ GR KTGTP RL+G+TI + + E+Q DE +PFS++ +K+ R Sbjct: 185 DSLRELGFEVGRFKTGTPCRLNGRTIDFSQCERQGGDEPPLPFSYIPEKLNERLHDIFTL 244 Query: 237 -----------QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRF 285 Q+ C IT TN TH +I N+ S +Y+G I+ GPRYCPSIEDK+VRF Sbjct: 245 NHWRDGKFHVEQLPCWITNTNPRTHELIRSNLDKSPLYAGRIEGVGPRYCPSIEDKVVRF 304 Query: 286 GERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDY 345 E+N HQ+FLEPEG +T+ Y NG+ST+LP E+Q+ FIR+IPGLE I+RPGYA+EYDY Sbjct: 305 SEKNSHQLFLEPEGRHTEEYYVNGVSTSLPMEVQYAFIRSIPGLENAEIMRPGYAVEYDY 364 Query: 346 INPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTD 405 P +L PTLETK++ L+ AGQINGT+GYEEA AQGL+AG N+A K + SR D Sbjct: 365 CPPTQLHPTLETKQVPHLYFAGQINGTSGYEEAGAQGLMAGANAALKLLDRPPLILSRAD 424 Query: 406 SYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFA 465 +YIGV+IDDL +KG LEPYRMFTSRAE+R+ LR DNAD RLTPI + G I R ++ Sbjct: 425 AYIGVLIDDLVTKGTLEPYRMFTSRAEHRLHLRQDNADLRLTPIAHRCGLISGYRWEKLQ 484 Query: 466 KYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPD- 524 I + LR + ++ ++L P+ L P+ Sbjct: 485 AKIASLSQLREYANTTHFGGGKIA----------------QWLRRPESDHTQL----PEG 524 Query: 525 -ARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEK 583 + F++ + + +QIE YA Y RQ ++++ E++ +P DY ++ L E ++K Sbjct: 525 LSAPFAAELWDSIQIELKYAGYITRQEAAIEKLRRNEEKTLPAQLDYEAISGLRAETRQK 584 Query: 584 LSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 L+ ++P QA++I G+TPA L LL +Y++K Sbjct: 585 LASIRPATFGQAARISGVTPADLALLSVYLEK 616 >gi|257095887|ref|YP_003169528.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257048411|gb|ACV37599.1| glucose inhibited division protein A [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 638 Score = 539 bits (1389), Expect = e-151, Method: Compositional matrix adjust. Identities = 294/620 (47%), Positives = 402/620 (64%), Gaps = 9/620 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA++G T L+TH T+G+MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALAAARMGMKTLLLTHNLETLGAMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D AGIQFR+LN KGPAVR R QADR LYR A++ + NL + Sbjct: 67 GGAMAEATDEAGIQFRILNSSKGPAVRATRAQADRVLYRQAIRSRLEKLPNLTIFAQACD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + + ++ +V Q VVLTTGTFL G+IH+G GRMGD P+ SL Sbjct: 127 DLILDGDRVAGVVSQLGVRFAARAVVLTTGTFLNGLIHVGLTNYTGGRMGDPPAVSLAAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP RLDG+TI + +Q +D+ L FSF+ D + +Q+ C IT Sbjct: 187 LRELQLPVGRLKTGTPPRLDGRTIDFSVMVEQHSDDPLPVFSFLGDAARHPQQLPCWITS 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH II N+ S +Y+G I+ GPRYCPSIEDKI RF ++ H IFLEPEGL T Sbjct: 247 TNPQTHAIIRANLDRSPMYTGVIEGVGPRYCPSIEDKIHRFAAKDSHNIFLEPEGLATHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q +R+I GLE +I+RPGYAIEYDY +P+ L +LET+ I GLF Sbjct: 307 IYPNGISTSLPFDVQLAIVRSIRGLENCHILRPGYAIEYDYFDPRGLKASLETRAIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG N+A + + R ++Y+GV++DDL ++GV EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGANAALLVQEREAWTPRRDEAYLGVLVDDLITRGVSEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+SLR DNAD RLT G +LG + +RR + F++ + LKS ++ Sbjct: 427 RMFTSRAEYRLSLREDNADMRLTEEGRRLGLVDDRRWQAFSEKRAAIGREQERLKSTWVS 486 Query: 485 SKNLS---STSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----CPDARKF-SSLVIERL 536 + ++ +T + K + ++ L PD S L ++ P A + VIE+L Sbjct: 487 PRLVADDEATRVLGKPLEHEYSLHDLLRRPDVSYAALMTLRAGEVPVAAGLGDAQVIEQL 546 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I++ Y Y RQ E E+ P+ FD+SS+ LS E+++KL++ +P L QAS Sbjct: 547 EIQARYQGYIERQQDEVARSLANEQTRFPEGFDFSSVGGLSKEVQQKLAVQRPQTLGQAS 606 Query: 597 KIEGMTPAALNLLLIYIKKN 616 +I+GMTPAA+++LL+++K+ Sbjct: 607 RIQGMTPAAISILLVHLKRG 626 >gi|319651094|ref|ZP_08005228.1| glucose-inhibited division protein A [Bacillus sp. 2_A_57_CT2] gi|317397264|gb|EFV77968.1| glucose-inhibited division protein A [Bacillus sp. 2_A_57_CT2] Length = 629 Score = 539 bits (1388), Expect = e-151, Method: Compositional matrix adjust. Identities = 277/619 (44%), Positives = 389/619 (62%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+G GHAG EA +A+LGA T +IT + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVVGAGHAGVEAGLASARLGAKTLMITINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ R+LN KGPAVR R QAD+ Y+ M++ + ++ NL +IQG V Sbjct: 67 LGGEMGKNIDKTHIQMRMLNTGKGPAVRALRAQADKFTYQHEMKKTLENEPNLTLIQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E +V Q ++ VV+TTGTFLRG I +G+LK +G PS L Sbjct: 127 ERLIVEDGECRGVVTQTGAVYHSKAVVITTGTFLRGEIILGELKYSSGPNNQQPSIKLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ +I + KTE Q D+ FS+ T K Q+ C +T Sbjct: 187 HLQELGFDLVRFKTGTPPRVNSHSIDYSKTEIQPGDDVPRAFSYETTKYITDQLPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN ETH +I N+ S +YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TNEETHTLIDNNLHRSPMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q + +RTIPGLE V ++R GYAIEYD I P +L+PTLETKK+ L+ Sbjct: 307 VYVQGLSTSLPEDVQQKILRTIPGLENVQMMRAGYAIEYDSIVPTQLWPTLETKKVKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AG+N+ KS + + SR+D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGMNAGLKSLDKEEVILSRSDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G K+G I E R ++F Q ++ L+ +++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTELGRKVGLISEERYEKFLMKKQAIEEEKARLQGIII- 485 Query: 485 SKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 K S K G + A + L P+ + +++ + P V E+++I+ Sbjct: 486 -KPTSDVQELIKSQGGSELKDGIRASDLLKRPEMTYEHIQQVVPAESTLDPDVTEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + + +K E + IP++ DY + L++E ++KL ++P +L QAS+I Sbjct: 545 IKYEGYIEKSLQQVERLKKMENKKIPENIDYDDINGLASEARQKLKEVRPLSLAQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+Y+++ + Sbjct: 605 GVNPADISILLVYLEQGRI 623 >gi|297539954|ref|YP_003675723.1| glucose inhibited division protein A [Methylotenera sp. 301] gi|297259301|gb|ADI31146.1| glucose inhibited division protein A [Methylotenera sp. 301] Length = 633 Score = 539 bits (1388), Expect = e-151, Method: Compositional matrix adjust. Identities = 289/618 (46%), Positives = 394/618 (63%), Gaps = 7/618 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++G T L+TH T+G MSCNP+IGG+GKGHLV+EIDAL Sbjct: 7 FDVIVVGGGHAGTEAALASARMGQKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 67 GGAMAAATDEGGIQFRVLNSSKGPAVRATRAQADRVLYKAAIRHRLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + +V Q +VVLT GTFL G++H+G AGR GD P+ SL Sbjct: 127 DIILEGDRAAGVVTQIGLRFTSKSVVLTAGTFLGGLVHVGLQNYSAGRAGDPPAISLAAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+DG+TI + Q D+ + FSFM + + Q+ C IT Sbjct: 187 LREIGLPAGRLKTGTPPRIDGRTIDYSVMTIQPGDDPVPVFSFMGNVAHHPAQLPCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II + S +Y+G I+ GPRYCPS+EDKI RF +++ HQIFLEPEGL T+ Sbjct: 247 TNERTHDIIRSGLDRSPMYTGVIEGVGPRYCPSVEDKIHRFADKDSHQIFLEPEGLTTNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK + GLF Sbjct: 307 VYPNGISTSLPFDIQLALVRSVRGLENAHILRPGYAIEYDYYDPRGLKSSLETKMVQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG N+A S + C +R ++Y+GVM+DDL ++GV EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGANAALYSQGKESWCPARDEAYLGVMVDDLITRGVTEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG KLG + + R + F++ + + LK + Sbjct: 427 RMFTSRAEYRLQLREDNADMRLTEIGRKLGLVDDARWEAFSRKKEAVEREQDRLKKTFVQ 486 Query: 485 SKNLSSTSISFKQDGKT----RTAYEFLSYPDFSIQNLFSICP-DARKFSSLVIERLQIE 539 N+ + + + GK + +E L P+ S + + ++ + V E+++I Sbjct: 487 PANVPTEKM-VEMFGKPLEHEYSLFELLRRPEVSYEAVLTLGEIGLGEVEPSVREQVEIA 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + Y Y RQ E + +E +P + DY + L E ++KL+ KP + QAS+I Sbjct: 546 AKYQGYIDRQTDEVARSRGQENTRLPDNLDYREIHGLPIEAQQKLNAQKPETIGQASRIS 605 Query: 600 GMTPAALNLLLIYIKKNT 617 G+TPAA++LLL+Y+K+ + Sbjct: 606 GITPAAISLLLVYLKRQS 623 >gi|295678144|ref|YP_003606668.1| glucose inhibited division protein A [Burkholderia sp. CCGE1002] gi|295437987|gb|ADG17157.1| glucose inhibited division protein A [Burkholderia sp. CCGE1002] Length = 652 Score = 539 bits (1388), Expect = e-151, Method: Compositional matrix adjust. Identities = 284/626 (45%), Positives = 391/626 (62%), Gaps = 15/626 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++G T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALASARMGNKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D +GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 67 GGAMAAATDESGIQFRILNSSKGPAVRATRAQADRVLYKAAIRHRLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 127 DLIVEGDRVVGAVTQVGIRFRSRAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTD-KITNRQIECGIT 243 + GRLKTGTP R+DG+TI + + E+Q D +P FSF+ + RQ+ C +T Sbjct: 187 LKELKLPQGRLKTGTPPRIDGRTIDYSQLEEQPGDLDPVPVFSFLGRVEQHPRQVPCWVT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQI+LEPEGL T+ Sbjct: 247 HTNQRTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIYLEPEGLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP ++Q + +R++ GLE +I+RPGYAIEYDY +P+ L +LETK I+GL Sbjct: 307 EFYPNGISTSLPFDVQLELVRSMQGLEHAHILRPGYAIEYDYFDPRGLKASLETKVINGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQG++AGIN+ + C R +Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGVLAGINAGLFVQGKEAWCPRRDQAYLGVLVDDLVTRGVSEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F++ + L+S + Sbjct: 427 YRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDDARWDAFSRKRDAVSRETQRLRSTWV 486 Query: 484 TSKNLS---STSISFKQDGKTRTAYEFLSYPDFSIQNLFSI------CPDARKFSSLVI- 533 K LS +T + K + + L P S + ++ P+A +++ Sbjct: 487 NPKTLSAEQATELLGKPIDHEYSLADLLRRPGVSYDGVCALRDGTCGAPEALAEDPVLLG 546 Query: 534 ---ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 E+++I Y Y RQ E + + +E +P+ DY+ + LS E ++KL +P Sbjct: 547 QIKEQIEIGVKYQGYIDRQAGEIERNEAQENTRLPEGLDYTEVRGLSFEARQKLMQFRPE 606 Query: 591 NLLQASKIEGMTPAALNLLLIYIKKN 616 + QAS+I G+TPAA++LL++++K+ Sbjct: 607 TIGQASRISGITPAAISLLMVHLKRG 632 >gi|37524081|ref|NP_927425.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Photorhabdus luminescens subsp. laumondii TTO1] gi|81170566|sp|Q7NA86|MNMG_PHOLL RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|36783504|emb|CAE12344.1| Glucose inhibited division protein A [Photorhabdus luminescens subsp. laumondii TTO1] Length = 629 Score = 539 bits (1388), Expect = e-151, Method: Compositional matrix adjust. Identities = 285/619 (46%), Positives = 393/619 (63%), Gaps = 9/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA Sbjct: 6 QFDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLM + D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 66 LGGLMAKATDQAGIQFRTLNASKGPAVRATRAQADRVLYRQAVRMALENQPNLMIFQQPV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ V + R VVLT GTFL G IHIG GR G P+ SL Sbjct: 126 EDLIVENDTVTGAVTRMGLKFRAKAVVLTVGTFLDGKIHIGLENYSGGRAGGPPAISLAQ 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGIT 243 + RLKTGTP R+D +TI + + +Q D FSF+ + K +QI C IT Sbjct: 186 RLRELPLRVNRLKTGTPPRIDARTIDFSQLTQQLGDNPTPVFSFLGNVKQHPQQIPCYIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +R+ HQIFLEPEGL ++ Sbjct: 246 HTNEKTHDVIRNNLDRSPMYTGIIEGIGPRYCPSIEDKVMRFADRDAHQIFLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q Q + ++ G+E IIRPGYAIEYD+ +P++L TLE+K I GL Sbjct: 306 EIYPNGISTSLPFDVQMQIVHSMKGMENARIIRPGYAIEYDFFDPRDLKQTLESKFIHGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+AR +++ + R +YIGV++DDL + G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGLNAARYASEEESWFPRRDQAYIGVLVDDLCTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT G +LG + + R + + + ++ R L+++ + Sbjct: 426 YRMFTSRAEYRLMLREDNADLRLTEKGRELGLVDDSRWEHYCRKLEMVEQERQRLRNIWI 485 Query: 484 TSKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLFSI---CPDARKFSSLVIERLQ 537 + + I+ K + L P+ + + L S+ P + + ++++ Sbjct: 486 HPNSNNLNDINNILKMPLSKEANGEDLLRRPEMNYKLLTSLPLFSPSLEEPQA--ADQVE 543 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ Y Y RQ E ++ E +P D DY + LSNE+ KL+ KP ++ QAS+ Sbjct: 544 IQVKYEGYIARQQEEIEKQLRNENTSLPVDLDYRQISGLSNEVVAKLNDHKPSSIGQASR 603 Query: 598 IEGMTPAALNLLLIYIKKN 616 I G+TPAA+++LL+++KK Sbjct: 604 ISGVTPAAISILLVWLKKQ 622 >gi|184158704|ref|YP_001847043.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Acinetobacter baumannii ACICU] gi|260554556|ref|ZP_05826777.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Acinetobacter baumannii ATCC 19606] gi|332873697|ref|ZP_08441640.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Acinetobacter baumannii 6014059] gi|238690971|sp|B2HUB2|MNMG_ACIBC RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|183210298|gb|ACC57696.1| putative NAD/FAD-utilizing enzyme [Acinetobacter baumannii ACICU] gi|260411098|gb|EEX04395.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Acinetobacter baumannii ATCC 19606] gi|322507485|gb|ADX02939.1| gidA [Acinetobacter baumannii 1656-2] gi|323518618|gb|ADX92999.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Acinetobacter baumannii TCDC-AB0715] gi|332738085|gb|EGJ68969.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Acinetobacter baumannii 6014059] Length = 626 Score = 539 bits (1388), Expect = e-151, Method: Compositional matrix adjust. Identities = 290/619 (46%), Positives = 389/619 (62%), Gaps = 6/619 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GK HLVREID Sbjct: 5 KVYDVIVIGGGHAGTEAALAAARMGRQTLLLTHNIETLGQMSCNPAIGGIGKSHLVREID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M AD GIQFR+LN +KG AVR R QADR Y+ A++ + +Q NLD+ Q Sbjct: 65 ALGGAMALAADKGGIQFRILNSRKGAAVRATRAQADRVRYKAAIRETLENQANLDIFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 E + + +V Q TVVLTTGTFL GVIH+G K GR GD PS +L Sbjct: 125 ADDLIVEGDTVKGVVTQMGIRFDAKTVVLTTGTFLGGVIHVGLEKSSGGRAGDPPSIALA 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + GRLKTGTP R+D +++ + Q D SFM D + Q+ C I Sbjct: 185 QRLRELKLPVGRLKTGTPPRIDARSVDFSVMTPQPGDFPSPVMSFMGDVSMHPEQVNCYI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II + S +Y+G I+ GPRYCPSIEDKI RF +++ HQ+FLEPEGL+T Sbjct: 245 THTNEKTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFSDKDSHQVFLEPEGLDT 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNGIST+LP ++Q + +R+I G+E +I+RPGYAIEYDY NP+ L TLETK I+G Sbjct: 305 HELYPNGISTSLPFDVQFELVRSIRGMENAHILRPGYAIEYDYFNPQALKFTLETKAING 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQINGTTGYEEA AQGL+AG+N+AR++ + + R +Y+GV++DDL + G E Sbjct: 365 LYFAGQINGTTGYEEAGAQGLLAGLNAARRAWEQEEWTPKRDQAYMGVLVDDLITLGTKE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT IG +LG + + R + + ++ S L+ L Sbjct: 425 PYRMFTSRAEYRLMLREDNADQRLTTIGRELGLVDDVRWAAYCEKMEAVERETSRLQHLW 484 Query: 483 LTSKNLSS---TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 N ++ K +A + L P+ + + + + S V E+++I Sbjct: 485 AAPNNPMGKKFVEMTGADLSKECSAIDLLKRPNINFGQIAELT--GSEVSQQVGEQIEIA 542 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ + ++K E+ IP DFDY + LS E+ +KL ++P L QAS+I Sbjct: 543 VKYEGYINRQHEDVAQLKRLEETKIPADFDYDVVSGLSREITQKLKTVRPETLAQASRIP 602 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+TPAA+ L++I I+KN + Sbjct: 603 GVTPAAVQLVMITIRKNNM 621 >gi|91777103|ref|YP_546859.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Methylobacillus flagellatus KT] gi|123380252|sp|Q1GXL9|MNMG_METFK RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|91711090|gb|ABE51018.1| glucose inhibited division protein A [Methylobacillus flagellatus KT] Length = 634 Score = 539 bits (1388), Expect = e-151, Method: Compositional matrix adjust. Identities = 287/620 (46%), Positives = 399/620 (64%), Gaps = 7/620 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI++GGGHAG EAA +A++G T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIIVGGGHAGTEAALASARMGQKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q V Sbjct: 67 GGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRVLYKAAIRRRLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E ++ +V Q VVLT GTFL G++H+G AGR GD P+ SL Sbjct: 127 DIILEGERVAGVVTQLGLRFESKAVVLTAGTFLAGLVHVGLANYQAGRAGDPPAVSLAAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+DG+TI + +Q D + FSF+ + Q+ C IT Sbjct: 187 LREIGLPAGRLKTGTPPRIDGRTIDYSVMAEQPGDSPVPVFSFLGSAEQHPAQLPCWITF 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH II + S +Y+G I+ GPRYCPS+EDKI RF +++ HQ+FLEPEGL T+ Sbjct: 247 TNEKTHDIIRSGLDRSPMYTGVIEGVGPRYCPSVEDKIHRFADKDSHQVFLEPEGLTTNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP +IQ+Q +R+I GLE +I+RPGYAIEYDY +P+ L +LETK I GLF Sbjct: 307 IYPNGISTSLPFDIQYQLVRSIKGLENAHILRPGYAIEYDYYDPRGLKSSLETKAIRGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG N+A + + D +R +Y+GV++DDL ++GV EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGANAALYAQEKDAWWPTRDQAYLGVLVDDLITRGVSEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G KLG + + R + F + + + L+ + Sbjct: 427 RMFTSRAEYRLMLREDNADMRLTEAGRKLGLVDDVRWEAFQRKQEAIEREQQRLRRTFIH 486 Query: 485 SKNLSSTSIS---FKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS--LVIERLQIE 539 +++ + K + + +E L P+ S + L S+ P A + + V ++L+I Sbjct: 487 PQHVPQEQLQQVFGKVLEREYSMFELLRRPEVSYEALLSL-PQAGEGEADPQVRQQLEIV 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + Y Y RQ E + +K E +P + DYS + LS E+++KL+ KP + QA +I Sbjct: 546 AKYQGYIDRQAEEIERLKESEHYRLPLNMDYSEVHGLSIEVQQKLNKQKPETIGQAGRIS 605 Query: 600 GMTPAALNLLLIYIKKNTVK 619 G+TPAA++LLL+++K+ + K Sbjct: 606 GVTPAAVSLLLVHLKRKSRK 625 >gi|312882250|ref|ZP_07741996.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio caribbenthicus ATCC BAA-2122] gi|309370094|gb|EFP97600.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio caribbenthicus ATCC BAA-2122] Length = 632 Score = 539 bits (1388), Expect = e-151, Method: Compositional matrix adjust. Identities = 278/621 (44%), Positives = 391/621 (62%), Gaps = 5/621 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + +DVIV+GGGHAG EAA +A+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHEKFDVIVVGGGHAGTEAALASARTGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ G+M + D +GIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGIMAKAIDHSGIQFRTLNASKGPAVRATRAQADRALYKAYIRHALENAANLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E++ + ++ Q +VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQSVDDLIVEQDRVIGVITQMGLKFFAQSVVLTVGTFLGGKIHIGMESSSGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D +++ + E Q D+ FSF+ + + RQI Sbjct: 182 ALADRLRELPFRVDRLKTGTPPRIDARSVDFSGLEVQHGDDPAPVFSFLGHRAQHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +++ HQIF+EPEG Sbjct: 242 CFITHTNEATHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKSSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L+T +YPNGIST+LP ++Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LDTHELYPNGISTSLPFDVQVDIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 IQGLFFAGQINGTTGYEEAAAQGLMAGLNASLYSQGKEGWNPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG + + R +RF + I+ R LK Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADIRLTEQARELGLVDDERWQRFNQKIENIELERQRLK 481 Query: 480 SLVLTSKNLSSTSIS-FKQDGKTRTAY--EFLSYPDFSIQNLFSICPDARKF-SSLVIER 535 ++ + K+ ++ + + R A + L P+ + L + + E+ Sbjct: 482 NIWMNPKSEGIADLNQYLKSPMVREASGEDLLRRPELNYLQLTKLAAFSPALEDQQAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y RQ E ++ E +P DFDY + LSNE+ KL+ KP +L A Sbjct: 542 VEIQVKYEGYIKRQQDEIEKSLRHEHTKLPLDFDYQLVKGLSNEVVSKLNESKPESLGIA 601 Query: 596 SKIEGMTPAALNLLLIYIKKN 616 S+I G+TPAA+++LL+++KK Sbjct: 602 SRISGVTPAAISILLVHLKKQ 622 >gi|163803608|ref|ZP_02197474.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio sp. AND4] gi|159172602|gb|EDP57460.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio sp. AND4] Length = 631 Score = 539 bits (1388), Expect = e-151, Method: Compositional matrix adjust. Identities = 281/625 (44%), Positives = 388/625 (62%), Gaps = 13/625 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA +A+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHENFDVIVVGGGHAGTEAALASARTGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAEAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRNALENTPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V ++ + +V Q + VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQSVDDLIVNQDRVVGVVTQMGLKFHANAVVLTVGTFLGGKIHIGMESSSGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D +++ + E Q D FSFM + RQI Sbjct: 182 ALADRLRELPFRVDRLKTGTPPRIDARSVDFSVLEAQHGDNPTPVFSFMGKREHQPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CFITHTNEQTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTHELYPNGISTSLPFDVQVQIVRSMKGFGNAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I+GLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 INGLFFAGQINGTTGYEEAAAQGLMAGLNASLHSQGKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG + + R RF + I R LK Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLVDDARWARFNQKIDNMETERQRLK 481 Query: 480 SLVLTSKN--------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL 531 S + + L T ++ + G+ + Y + + F+ + ++ S Sbjct: 482 STWMNPNSAGIDELNKLLKTPMAREASGEDLLRRPEIVYSTLTQLDAFAPALEDQQAS-- 539 Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 E+++I+ Y Y RQ E ++ E +P D DY + LSNE+ KL+ KP + Sbjct: 540 --EQVEIQVKYDGYIKRQQDEIEKSLRHEHTKLPTDLDYQDVKGLSNEVVAKLTEAKPES 597 Query: 592 LLQASKIEGMTPAALNLLLIYIKKN 616 + AS+I G+TPAA+++LL+++KK+ Sbjct: 598 IGIASRISGITPAAISILLVHLKKH 622 >gi|254515876|ref|ZP_05127936.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [gamma proteobacterium NOR5-3] gi|219675598|gb|EED31964.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [gamma proteobacterium NOR5-3] Length = 643 Score = 538 bits (1387), Expect = e-151, Method: Compositional matrix adjust. Identities = 292/622 (46%), Positives = 392/622 (63%), Gaps = 13/622 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G +T L+TH T+G MSCNPAIGG+GK HLVREIDAL Sbjct: 7 FDVIVIGGGHAGTEAALAAARMGCATLLLTHSVDTLGQMSCNPAIGGIGKSHLVREIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + D AGIQFRVLN +KGPAVR R QADR LYR A++ I +Q L V Q V Sbjct: 67 GGAMAKATDQAGIQFRVLNSRKGPAVRATRAQADRVLYRNAIRSIIEAQSGLQVFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + +V Q R V+LTTGTFL G +HIG K GR GD PSN+L Sbjct: 127 DLIIENGAVQGVVTQTGLRFRAPRVILTTGTFLGGQMHIGLTKSAGGRAGDPPSNTLAAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP RLD ++I E Q+ DE SF+ D + Q C + Sbjct: 187 LRELPLRVERLKTGTPPRLDARSIDLASLETQWGDEPRPVMSFLGDPDQHPDQRCCWVAY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II E + S +Y+G I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T+ Sbjct: 247 TNQHTHDIIREGLDRSPLYTGVIEGEGPRYCPSIEDKIQRFADKTSHQVFVEPEGLTTNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q +R+I G E +I RPGYAIEYD+ +P++L +LET+ I GL+ Sbjct: 307 LYPNGISTSLPFDVQMALVRSIQGFENAHITRPGYAIEYDFFDPRDLRSSLETRAIGGLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AGIN+A + C R ++Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGINAALAIREEAPWCPRRDEAYLGVLVDDLITLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFA---KYIQEYNFLRSLLKSL 481 RMFTSRAE+R+ LR DNAD RLT G KLG + + R +F+ + I++ + LL+S Sbjct: 427 RMFTSRAEHRLLLREDNADLRLTEQGRKLGLVDDERWAQFSEKRELIEQEQ--KRLLRSF 484 Query: 482 VLTSKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSICPDARKFSS-LVIERLQ 537 V + ++ S++ K Y E L P+ ++ ++ D+ S+ ++ Sbjct: 485 V-HPGSPAANSLNAKLSKPLSREYSYAELLKRPELEYADISAL--DSLGISNPQAALQVS 541 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I++ YA Y RQ E ++ E +P D DY + LSNE+++KL +P L +AS+ Sbjct: 542 IQAKYAGYIDRQQDEIDRVRRYEGLTLPSDMDYLQVSGLSNEVRDKLIAQQPETLGRASR 601 Query: 598 IEGMTPAALNLLLIYIKKNTVK 619 I G+TPAA++LLL+++K+ K Sbjct: 602 IPGVTPAAISLLLVHMKRRQGK 623 >gi|117927029|ref|YP_867646.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Magnetococcus sp. MC-1] gi|205831531|sp|A0LE47|MNMG_MAGSM RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|117610785|gb|ABK46240.1| glucose inhibited division protein A [Magnetococcus sp. MC-1] Length = 599 Score = 538 bits (1387), Expect = e-151, Method: Compositional matrix adjust. Identities = 282/616 (45%), Positives = 394/616 (63%), Gaps = 23/616 (3%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M N+ +DV+V+G GHAGCEAA AA LG T L T +IG MSCNPAIGG+GKGHLV+ Sbjct: 1 MFNQHFDVVVVGAGHAGCEAAHAAATLGCRTLLSTQVIDSIGQMSCNPAIGGIGKGHLVK 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DAL G+MG VAD +GIQF+ LN +KGPAV G R Q D+ YR M++ + + NL++ Sbjct: 61 ELDALGGVMGIVADQSGIQFKKLNQRKGPAVHGSRAQIDKMAYRKNMKKILDACANLEIK 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q EV + + + + N + C +V+ TGTFL G+IHIG+ K P+GR+GD S+ Sbjct: 121 QAEVVELIIKNSCVVGVKTDWNEVYSCGAIVIATGTFLDGLIHIGERKFPSGRLGDKESH 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 L + R KTGTP RLDG+T+ +K +Q D PFSFM DKI ++ C Sbjct: 181 PLAVNIKSLGLKISRFKTGTPPRLDGRTVNIEKLNRQDGDAIPSPFSFMHDKIERPEMPC 240 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 I +T+ ET +II +NI SA+YSG I+ GPRYCPSIEDKI +F ER HQ+FLEPEG Sbjct: 241 WIAQTSKETKQIIEKNIHRSAMYSGQIEGVGPRYCPSIEDKIKKFKEREVHQVFLEPEGE 300 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 NT+ +Y NG+ST++P ++Q Q IR+I GLE I++PGYAIEYD + P EL TL+TKK Sbjct: 301 NTNEMYVNGVSTSMPIDVQWQMIRSIVGLENAQIVKPGYAIEYDMVMPTELDHTLKTKKY 360 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GL+LAGQINGTTGYEEAAAQG++AG+N+AR + K F R D Y GVM+DDL ++GV Sbjct: 361 DGLYLAGQINGTTGYEEAAAQGMIAGLNAARFAKKESSYRFERYDGYFGVMVDDLVTRGV 420 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSR+E RI R DNAD RLTP+G +LG +G +R +++ ++Y+ L L Sbjct: 421 DEPYRMFTSRSELRIVHREDNADMRLTPLGHELGLVGHKRWEKYLSKKKQYDLLEDL--- 477 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL---VIERLQ 537 S FK +G+ + E L D ++ +C +A + +L V+E + Sbjct: 478 -----------SQKFKINGQPVS--EILKRTDCDLEK---VC-EAMQLDALSKNVLEIYK 520 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 + Y+ Y + + E ++ ++PK+ D+S + +LS+E++ +L + Sbjct: 521 NDLIYSGYEKKIIAENSRVEKYRSHVLPKEIDWSKVASLSSEVRLRLEKSDCRTVADVIA 580 Query: 598 IEGMTPAALNLLLIYI 613 +G+TPA++ +LIY+ Sbjct: 581 TKGVTPASVVNILIYL 596 >gi|188588132|ref|YP_001922716.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium botulinum E3 str. Alaska E43] gi|188498413|gb|ACD51549.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium botulinum E3 str. Alaska E43] Length = 626 Score = 538 bits (1387), Expect = e-151, Method: Compositional matrix adjust. Identities = 275/611 (45%), Positives = 395/611 (64%), Gaps = 3/611 (0%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALD 66 DV+V+G GHAGCEAA +A++G +T + T +I M CNP IGG KGHLVREIDAL Sbjct: 11 DVVVVGAGHAGCEAALASARMGLNTLICTINLDSIAMMPCNPNIGGTAKGHLVREIDALG 70 Query: 67 GLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAG 126 G MG D IQ R+LN KGPAV R QAD++ Y+ M+R + QENL + Q EV Sbjct: 71 GEMGVNIDHTFIQSRMLNTSKGPAVHSLRAQADKKDYQFRMKRVLEEQENLQIRQIEVTE 130 Query: 127 FNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSF 186 E N ++ I+ ++ ++ R V+L TGT+L+G I IG++ G G P+N L S Sbjct: 131 LLVEGNKVTGIITRNGAIFRAKAVILATGTYLKGKIIIGEVSYSGGPNGLFPANDLSQSL 190 Query: 187 MKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTN 246 + R KTGTPAR++ +++ + K +Q D++++PFSFM+ I QI C +T TN Sbjct: 191 LDLGISLRRFKTGTPARINRRSVDFSKMIEQPGDDKIVPFSFMSKNIDKEQISCYLTYTN 250 Query: 247 LETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVY 306 +TH +I +NI S IY+G IK GPRYCPSIEDK++RF ++ HQIF+EPEGL+T +Y Sbjct: 251 EQTHNVIKDNIGRSPIYNGSIKGVGPRYCPSIEDKVMRFPDKLQHQIFVEPEGLDTLEMY 310 Query: 307 PNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLA 366 G+S++LPEE+Q + +RT+PGLE V I+R YAIEYD ++P EL PTLE K + GL+ A Sbjct: 311 VGGMSSSLPEEVQLKMMRTLPGLENVEIMRTAYAIEYDSVDPTELEPTLEFKNVEGLYGA 370 Query: 367 GQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRM 426 GQ NG++GYEEA AQGLVAGIN+A K + + +R+D+YIGV+IDDL +KG EPYRM Sbjct: 371 GQFNGSSGYEEAGAQGLVAGINAALKIKGEEPMILTRSDAYIGVLIDDLVTKGTNEPYRM 430 Query: 427 FTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSK 486 TSRAEYR+ LR DNAD RLT IG K+G + R + F LK L +T+K Sbjct: 431 MTSRAEYRLILRQDNADFRLTEIGKKVGLVTAERYETFLNRKNTIENELERLKKLQITNK 490 Query: 487 NLSST---SISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 ++ ++ + K + YE + P+ +L ++ + + S + E++ I + Y Sbjct: 491 RETNEFLLAVGSAELKKPISFYELIKRPEVDYFSLKNLDTEREELSEDIGEQINIIAKYE 550 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y Q+ + + + EK+L+PKD DYS++ L E ++KL+ +KP ++ QAS+I G++P Sbjct: 551 GYISNQLEQVAQFRKFEKKLLPKDIDYSNVKGLRTEAEQKLNSIKPISIGQASRISGVSP 610 Query: 604 AALNLLLIYIK 614 A +++LLIY++ Sbjct: 611 ADISVLLIYLE 621 >gi|297570271|ref|YP_003691615.1| glucose inhibited division protein A [Desulfurivibrio alkaliphilus AHT2] gi|296926186|gb|ADH86996.1| glucose inhibited division protein A [Desulfurivibrio alkaliphilus AHT2] Length = 662 Score = 538 bits (1387), Expect = e-151, Method: Compositional matrix adjust. Identities = 287/662 (43%), Positives = 394/662 (59%), Gaps = 45/662 (6%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + YD+IV+G GHAGCEAA AA+LG TAL+ TI ++SCNPA+GGL KGHLVRE Sbjct: 1 MKEHYDIIVVGAGHAGCEAALAAARLGCRTALLVMNADTIAALSCNPAVGGLAKGHLVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M R DA GIQFR LN +GPAVR R QADR LY M++ I +Q NL++ Q Sbjct: 61 IDALGGEMARNIDATGIQFRQLNTSRGPAVRSSRAQADRRLYPQRMKKVIEAQPNLELRQ 120 Query: 122 GEVAGF----NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 + ++ + + + V++TTGTFL G+IHIG PAGR+GD Sbjct: 121 ATADQLLIDTSHGRSRVCGVETSLGERLLAGAVIITTGTFLNGLIHIGLKHFPAGRLGDP 180 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADE--RLIPFSFMTDKITN 235 PS SL F GR+KTGTP RL+G +I + + E Q D+ +L F+ + K Sbjct: 181 PSLSLPGHLKALGFAMGRMKTGTPPRLNGGSIDYRQLESQPGDDPPQLFSFANVGQKPPL 240 Query: 236 RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFL 295 Q+ C IT T TH II S +++G I+ G RYCPS+EDKI+RF E+ HQIFL Sbjct: 241 PQVPCHITYTTAATHEIIRAGCGQSPLFTGVIQGVGARYCPSVEDKIIRFPEKERHQIFL 300 Query: 296 EPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTL 355 EPEGL+T VYPNG+ST+LP E+QH IR++PGLE+ +IRPGYAIEYDY++P EL P L Sbjct: 301 EPEGLDTLEVYPNGLSTSLPLEVQHAMIRSVPGLERARMIRPGYAIEYDYVDPLELHPWL 360 Query: 356 ETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDL 415 E K++ LFLAGQINGT+GYEEAAAQGL+AGIN+ R+ L+ + R+ +YIGV+IDDL Sbjct: 361 ECKRLEHLFLAGQINGTSGYEEAAAQGLMAGINAVRQLGGLEPVVLDRSQAYIGVLIDDL 420 Query: 416 TSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLR 475 +KG EPYR+FTSRAEYR+ LR DNAD RL IG ++G + E R + F + + L+ Sbjct: 421 VTKGTKEPYRLFTSRAEYRLLLREDNADFRLCEIGHQIGLLDEPRYRFFRRKRENMALLK 480 Query: 476 SLLKSLVLTSKNLSSTSISFKQDGKTR---TAYEFLSYPDFSIQNLFSICPDARK----- 527 L+ L + ++ R + E L P+ +I + ++ ++ Sbjct: 481 QQLEQTRLHPTPEVNRQLAELPSSPLRQPISLAELLRRPELNIDTVLALAGESGALPAAQ 540 Query: 528 -------------------------------FSSLVIERLQIESSYAAYTGRQMIEAKEI 556 FS + + +++E YA Y RQ + + Sbjct: 541 PLAAGTLAAPAPAIDPAIAPAGHGEAQQPTYFSRHIRQEVELELKYAGYIARQQEQVQRF 600 Query: 557 KFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKN 616 + E + +P D Y+ +P LS E+ EKL ++P L QA++I G+TPAA+++L + +KK Sbjct: 601 RKLESQRLPDDLQYAGMPGLSLEVAEKLERVRPRTLGQAARISGITPAAISILQVQLKKR 660 Query: 617 TV 618 T Sbjct: 661 TA 662 >gi|296157546|ref|ZP_06840381.1| glucose inhibited division protein A [Burkholderia sp. Ch1-1] gi|295892318|gb|EFG72101.1| glucose inhibited division protein A [Burkholderia sp. Ch1-1] Length = 652 Score = 538 bits (1387), Expect = e-151, Method: Compositional matrix adjust. Identities = 284/626 (45%), Positives = 391/626 (62%), Gaps = 15/626 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++G +T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALASARMGNTTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 67 GGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRLLYKQAIRHRLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 127 DLMVEGDRVVGAVTQVGIRFRGRAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTD-KITNRQIECGIT 243 + GRLKTGTP R+DG+TI + + E+Q D +P FSF+ + RQ+ C +T Sbjct: 187 LKELKLPQGRLKTGTPPRIDGRTIDFSQLEEQPGDLDPVPVFSFLGRVEQHPRQVPCWVT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPEGL T+ Sbjct: 247 HTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPEGLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP ++Q + +R++ GLE +I+RPGYAIEYDY +P+ L +LETK I+GL Sbjct: 307 EFYPNGISTSLPFDVQLELVRSMRGLEHAHILRPGYAIEYDYFDPRGLKASLETKVINGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ + C R +Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGINAGLYVQGKEAWCPRRDQAYLGVLVDDLVTRGVSEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F++ + L++ + Sbjct: 427 YRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDDVRWDAFSRKRDAVSRETERLRTTWV 486 Query: 484 TSKNLSS---TSISFKQDGKTRTAYEFLSYPDFSIQNLFSI------CPDARKFSSLVI- 533 K LS+ T++ K + + L P S + ++ P+ +++ Sbjct: 487 NPKTLSTDEATALLGKPIDHEYSLADLLRRPGVSYDGVCALRAGACAAPETLAEDDVLLG 546 Query: 534 ---ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 E+++I Y Y RQ E + + E +P+ DY+ + LS E ++KL+ +P Sbjct: 547 QIKEQIEIGIKYQGYIDRQAGEIERNEAHESTRLPEGLDYAEVRGLSFEARQKLTQFRPE 606 Query: 591 NLLQASKIEGMTPAALNLLLIYIKKN 616 + QAS+I G+TPAA++LL++++K+ Sbjct: 607 TIGQASRISGITPAAISLLMVHLKRG 632 >gi|241664777|ref|YP_002983137.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ralstonia pickettii 12D] gi|240866804|gb|ACS64465.1| glucose inhibited division protein A [Ralstonia pickettii 12D] Length = 649 Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust. Identities = 288/629 (45%), Positives = 387/629 (61%), Gaps = 15/629 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALAAARMGCQTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 67 GGAMAIATDEGGIQFRILNSSKGPAVRATRAQADRVLYKAAIRHRLENQPNLMLFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 127 DLLVEGDRVVGAVTQVGVQFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFM-TDKITNRQIECGIT 243 + GRLKTGTP R+DG++I + E+Q D +P FSFM ++ RQ+ C +T Sbjct: 187 LKELKLPQGRLKTGTPPRIDGRSINFSVLEEQPGDLDPVPVFSFMGRAEMHPRQVPCWVT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T+ Sbjct: 247 HTNERTHDIIRAGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNG+ST+LP ++Q I ++ GLE I+RPGYAIEYDY +P+ L +LE+K ISGL Sbjct: 307 EFYPNGVSTSLPFDVQLDLIHSMRGLENAYILRPGYAIEYDYFDPRALKASLESKAISGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ ++ D R +Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGINAGQQVQGKDAWTPRRDQAYLGVLVDDLITRGVTEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R+SLR DNAD RLT +G LG + + R F + + LKS + Sbjct: 427 YRMFTSRAEFRLSLREDNADMRLTEVGRALGVVDDARWDAFNRKRDAVSRETERLKSTWV 486 Query: 484 TSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI--------CPDARK--FSS 530 L + + K + + L P+ + + L + P A + Sbjct: 487 NPATLPLEDAEPVLGKGIEREYALADLLRRPNVTYETLMGMQGGKYALEAPLAEDPLLAE 546 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 + E+++I Y Y RQ E + + E +P DFDYS + LS E+++KL+ KP Sbjct: 547 QIREQVEIGIKYHGYIARQADEVERLGANENTRLPADFDYSQVRGLSIEVQQKLAKHKPE 606 Query: 591 NLLQASKIEGMTPAALNLLLIYIKKNTVK 619 + QAS+I G+TPAA++LLL+++KK ++ Sbjct: 607 TIGQASRISGITPAAVSLLLVHLKKGVLR 635 >gi|163751411|ref|ZP_02158636.1| glucose-inhibited division protein A [Shewanella benthica KT99] gi|161328714|gb|EDP99862.1| glucose-inhibited division protein A [Shewanella benthica KT99] Length = 630 Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust. Identities = 293/620 (47%), Positives = 384/620 (61%), Gaps = 15/620 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA++G++T L+TH T+G MSCNPAIGG+GKGHLV+EIDAL Sbjct: 7 FDVIVVGGGHAGTEAALAAARMGSNTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D AGIQFR LN KGPAVR R QADR LYR +Q+ + +Q NL + Q V Sbjct: 67 GGAMAIATDFAGIQFRTLNSSKGPAVRATRAQADRALYRAKIQQILQNQPNLRLFQQGVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + +V Q TVVLT GTFL G IHIG GR GD PS +L + Sbjct: 127 DLIVENGRVIGVVTQMGLAFEAPTVVLTAGTFLSGKIHIGLQNYSGGRAGDPPSIALADR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGITR 244 + GRLKTGTP R+D +I +D +Q D L SF+ D K RQ+ C +T Sbjct: 187 LRELPLRIGRLKTGTPPRIDANSINFDLMTEQKGDTPLPVMSFVGDVKDHPRQVSCYVTH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II + S +YSG I+ GPRYCPSIEDKI RF ++ HQIF+EPEGLNT+ Sbjct: 247 TNERTHEIIRGGLDRSPMYSGVIEGIGPRYCPSIEDKINRFADKTSHQIFIEPEGLNTNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q +R+I G+E IIRPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 IYPNGISTSLPFDVQLDLVRSIKGMENAQIIRPGYAIEYDYFDPRDLKKSLETKAIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N++ + + R +Y+GV++DDL++ G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGMNASLQVQGKESWAPRRDQAYLGVLVDDLSTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNF-LRSLLKSLVL 483 RMFTSRAEYR+ LR DNAD RLT G + G + + R +F+K + L+ L V Sbjct: 427 RMFTSRAEYRLLLREDNADLRLTEKGREFGLVDDNRWSQFSKKRESIELELQRLRGQWVH 486 Query: 484 TSKNL-------SSTSISFKQDGKTRTAYEFLSYPDF-SIQNLFSICPDARKFSSLVIER 535 + L +T IS + + + YP ++ D R E+ Sbjct: 487 PNSPLLDVLNPQLNTPISREASFEDLLRRPEMDYPKLMKLEGFGPGLEDQR-----AAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 +QI+ Y+ Y RQ E + E +P D DY +P LSNE+ K++ KP + QA Sbjct: 542 VQIQIKYSGYIQRQQDEIDKALKHETTGLPLDLDYQEVPGLSNEVIAKMNEYKPETIGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I GMTPAA+++LL+++K+ Sbjct: 602 SRISGMTPAAISILLVHLKR 621 >gi|187251664|ref|YP_001876146.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Elusimicrobium minutum Pei191] gi|186971824|gb|ACC98809.1| Glucose-inhibited division protein [Elusimicrobium minutum Pei191] Length = 587 Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust. Identities = 276/617 (44%), Positives = 381/617 (61%), Gaps = 37/617 (5%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAGCEAA +A+LGA T LIT TI MSCNP+IGG+ KG +VREIDAL Sbjct: 8 YDVIVVGGGHAGCEAALASARLGAKTLLITQNLDTIAQMSCNPSIGGVAKGQIVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG++ DAAG+ + +LN KGPAV PR Q D+++Y+ + + Q NL++IQ EV Sbjct: 68 GGAMGKITDAAGLHYHMLNTGKGPAVHSPRVQCDKKIYQAEYKHTLEKQPNLELIQDEVK 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E +++ +V + V+LTTGTFL GVIHIG + P GR GD+PSN L S Sbjct: 128 ELYFEGSVLKGVVTLRGTKYLSKVVILTTGTFLGGVIHIGGVSFPGGRYGDTPSNFLTES 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 K D + R KTGTP R++ K + + +Q +D P S T + C ITRT Sbjct: 188 LKKTDLNVLRFKTGTPMRINAKDVDFSVFREQPSDNPFEPMSIFTAPFERNFLSCYITRT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 +TH I+ N+K SA+YSG I + GPRYCPS+EDKIV+F + H IFLEPEG NT Sbjct: 248 TEKTHEILKRNMKRSALYSGQITALGPRYCPSVEDKIVKFDQAPSHPIFLEPEGFNTQEY 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G ST++PE++Q + + ++PGLEK + R GYAIEYD+++P EL+ TLE KKI GL+ Sbjct: 308 YIQGFSTSMPEDVQRELLISVPGLEKAKLTRAGYAIEYDFVDPMELYATLEVKKIPGLYH 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEA AQGL+AG+N+ K N + + R +Y GVMIDDL +KGV EPYR Sbjct: 368 AGQINGTTGYEEAGAQGLIAGLNAVLKINGKEPVILGRDTAYTGVMIDDLVNKGVNEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAEYRI LR DNAD RLT IG K G + + ++ F +Y + +S Sbjct: 428 MFTSRAEYRIMLRSDNADLRLTDIGFKTGLVAKEYKQSFEEYKKAVEVFKS--------- 478 Query: 486 KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAY 545 + +E ++ P + +++ ARK + I++ Y+ Y Sbjct: 479 --------------NPKAEFEAVNMPAWRVES-------ARKTAV-------IDAMYSGY 510 Query: 546 TGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAA 605 R +A+++ +K +IP+ FD S++ + E +KL ++P L QAS+I G+TPA Sbjct: 511 YDRFKKDAEKLAQADKIIIPEGFDPSAVKGILIESSQKLKKVRPQTLGQASRIPGVTPAD 570 Query: 606 LNLLLIYIKKNTVKLNE 622 + LL ++I++ + N+ Sbjct: 571 IQLLAVHIERYRLSKNK 587 >gi|322513172|ref|ZP_08066303.1| glucose inhibited division protein A [Actinobacillus ureae ATCC 25976] gi|322121068|gb|EFX92892.1| glucose inhibited division protein A [Actinobacillus ureae ATCC 25976] Length = 630 Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust. Identities = 300/623 (48%), Positives = 393/623 (63%), Gaps = 8/623 (1%) Query: 1 MINRS-YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLV 59 MI R YDVIV+GGGH G EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV Sbjct: 1 MIYREIYDVIVVGGGHGGTEAALAPARMGLKTLLLTHNLDTLGQMSCNPAIGGIGKGHLV 60 Query: 60 REIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDV 119 +EIDA+ GLM D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Sbjct: 61 KEIDAMGGLMAIATDQAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDI 120 Query: 120 IQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 Q EV E N V + + +VVLT GTFL G IHIG GR GD + Sbjct: 121 FQQEVVDILVENNRAVGAVTKMGLTFKARSVVLTAGTFLAGKIHIGLDNYAGGRAGDPAA 180 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQI 238 L + + RLKTGTP RLD +TI +D KQ D L SFM + + RQI Sbjct: 181 TMLADRLRDLNLRVDRLKTGTPPRLDARTINFDVLAKQHGDAELPVMSFMGSVDLHPRQI 240 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C IT TN +TH +I ++ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPE Sbjct: 241 PCYITHTNEQTHDLIRNSLDRSPMYTGIIEGIGPRYCPSIEDKVMRFSDRNSHQIYLEPE 300 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL+T VYPNGIST+LP ++Q + ++ GLE II+PGYAIEYDY +P++L PTLETK Sbjct: 301 GLSTIEVYPNGISTSLPFDVQMGIVNSMKGLENTRIIKPGYAIEYDYFDPRDLKPTLETK 360 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I GLF AGQINGTTGYEEAAAQGL+AGIN+A + + +R +Y GV++DDL + Sbjct: 361 AIEGLFFAGQINGTTGYEEAAAQGLLAGINAALQVQGKEAWFPTRDLAYTGVLVDDLCTL 420 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYR+FTSRAEYR+ LR DNAD RLTPI +LG I + R RF + ++ R L Sbjct: 421 GTKEPYRVFTSRAEYRLLLREDNADIRLTPIAHQLGLIDDARWARFNQKMENIERERERL 480 Query: 479 KSLVL--TSKNLSSTSISFKQDGKTRTAY--EFLSYPDFSIQNLFSICPDARKFSS-LVI 533 K + + S++L++ + TR A + L P+ + + L + A Sbjct: 481 KQIWIHPQSEHLAAVN-ELVSSPLTREASGEDLLRRPEVTYEKLVQVAAFAPALDDKQAA 539 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I Y Y Q E + K E LIP +F+Y + +LSNE++ KL +P ++ Sbjct: 540 EQVEISIKYQGYIEHQQNEIERHKRHENTLIPAEFNYDKVESLSNEVRAKLMQHRPVSIG 599 Query: 594 QASKIEGMTPAALNLLLIYIKKN 616 QAS+I G+TPAA+++LL+ +KK Sbjct: 600 QASRISGITPAAISILLVNLKKQ 622 >gi|309780414|ref|ZP_07675164.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ralstonia sp. 5_7_47FAA] gi|308920807|gb|EFP66454.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ralstonia sp. 5_7_47FAA] Length = 649 Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust. Identities = 288/629 (45%), Positives = 386/629 (61%), Gaps = 15/629 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALAAARMGCQTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 67 GGAMAIATDEGGIQFRILNSSKGPAVRATRAQADRVLYKAAIRHRLENQPNLMLFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 127 DLLVEGDRVVGAVTQVGVQFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFM-TDKITNRQIECGIT 243 + GRLKTGTP R+DG++I + E+Q D +P FSFM + RQ+ C +T Sbjct: 187 LKELKLPQGRLKTGTPPRIDGRSINFSVLEEQPGDLDPVPVFSFMGRADMHPRQVPCWVT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T+ Sbjct: 247 HTNERTHDIIRAGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNG+ST+LP ++Q I ++ GLE +I+RPGYAIEYDY +P+ L +LE+K ISGL Sbjct: 307 EFYPNGVSTSLPFDVQLDLIHSMRGLENAHILRPGYAIEYDYFDPRALKASLESKAISGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ + D R +Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGINAGLQVQGKDAWTPRRDQAYLGVLVDDLITRGVTEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R+SLR DNAD RLT +G LG + + R F + + LKS + Sbjct: 427 YRMFTSRAEFRLSLREDNADMRLTEVGRALGVVDDARWDAFNRKRDAVSRETERLKSTWV 486 Query: 484 TSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI--------CPDARK--FSS 530 L + + K + + L P+ + + L + P A + Sbjct: 487 NPATLPLEDAEPVLGKGIEREYALADLLRRPNVTYETLMGMQGGKYALESPLAEDPLLAE 546 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 + E+++I Y Y RQ E + + E +P DFDYS + LS E+++KL+ KP Sbjct: 547 QIREQVEIGIKYHGYIARQADEVERLGANENTRLPADFDYSQVRGLSIEVQQKLAKHKPE 606 Query: 591 NLLQASKIEGMTPAALNLLLIYIKKNTVK 619 + QAS+I G+TPAA++LLL+++KK ++ Sbjct: 607 TIGQASRISGITPAAVSLLLVHLKKGVLR 635 >gi|224475498|ref|YP_002633104.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus carnosus subsp. carnosus TM300] gi|222420105|emb|CAL26919.1| glucose inhibited division protein A [Staphylococcus carnosus subsp. carnosus TM300] Length = 624 Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust. Identities = 284/620 (45%), Positives = 400/620 (64%), Gaps = 7/620 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDVIVIG GHAG EA +A+ GA T ++T +G M CNP++GG KG +VREIDA Sbjct: 4 DYDVIVIGAGHAGIEAGLASARRGAKTLMLTINLDNVGFMPCNPSVGGPAKGIVVREIDA 63 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R + +ENL ++QG V Sbjct: 64 LGGQMAKTIDRTHIQMRMLNTGKGPAVRALRAQADKVLYQKEMKRVLEDEENLHIMQGMV 123 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + I + + R VV+TTGTFLRG I +G LK +G PS +L + Sbjct: 124 DELIIEDDEIKGVRTNIGTEYRSKAVVITTGTFLRGEIILGNLKYSSGPNHQLPSVTLAD 183 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + + FD R KTGTP R++ KTI + KTE Q D+ FSF T + Q+ C +T Sbjct: 184 NLRELGFDIVRFKTGTPPRVNAKTIDYSKTEIQPGDDVGRAFSFETTEFILDQLPCWLTY 243 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG +T+ Sbjct: 244 TNDKTHQVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKYVRFNDKPRHQLFLEPEGRDTNE 303 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE +Q + ++TI GLEK +++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 304 VYVQGLSTSLPEHVQREMLQTIEGLEKADMMRAGYAIEYDAIVPTQLWPTLETKKIKNLY 363 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QG++AGIN+A + SR+D+YIGV+IDDL +KG EPY Sbjct: 364 TAGQINGTSGYEEAAGQGIMAGINAAGRVLGTGEKVLSRSDAYIGVLIDDLVTKGTNEPY 423 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF----AKYIQEYNFLRSL-LK 479 R+ TSRAEYR+ LR DNAD RLT +G +LG I + R RF + E N L ++ +K Sbjct: 424 RLLTSRAEYRLLLRHDNADLRLTDLGHELGMISDERYARFNEKRDQIEAEINRLTNIRIK 483 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 T + + S + S +DG A E L P+ Q + I + + + V E+++I+ Sbjct: 484 PNEHTQEVIKSRNGSPLKDGI--LAIELLRRPEMDYQAILDILEEDHQIPADVEEQVEIQ 541 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + Y Y + + + +++K E++ IP D DYS + +L++E +EKL+ +KP N+ QAS+I Sbjct: 542 TKYEGYINKSLQQVEKVKRMEQKKIPHDLDYSKIDSLASEAREKLAEVKPLNIAQASRIS 601 Query: 600 GMTPAALNLLLIYIKKNTVK 619 G+ PA +++LL+Y+++ ++ Sbjct: 602 GVNPADISILLVYLEQGKLE 621 >gi|213158566|ref|YP_002319864.1| glucose inhibited division protein A [Acinetobacter baumannii AB0057] gi|215482980|ref|YP_002325185.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Acinetobacter baumannii AB307-0294] gi|301347678|ref|ZP_07228419.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Acinetobacter baumannii AB056] gi|301511675|ref|ZP_07236912.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Acinetobacter baumannii AB058] gi|301597343|ref|ZP_07242351.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Acinetobacter baumannii AB059] gi|226704789|sp|B7H0I9|MNMG_ACIB3 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|226704790|sp|B7IC15|MNMG_ACIB5 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|213057726|gb|ACJ42628.1| glucose inhibited division protein A [Acinetobacter baumannii AB0057] gi|213987529|gb|ACJ57828.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Acinetobacter baumannii AB307-0294] Length = 626 Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust. Identities = 289/619 (46%), Positives = 389/619 (62%), Gaps = 6/619 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GK HLVREID Sbjct: 5 KVYDVIVIGGGHAGTEAALAAARMGRQTLLLTHNIETLGQMSCNPAIGGIGKSHLVREID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M AD GIQFR+LN +KG AVR R QADR Y+ A++ + +Q NLD+ Q Sbjct: 65 ALGGAMALAADKGGIQFRILNSRKGAAVRATRAQADRVRYKAAIRETLENQANLDIFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 E + + +V Q TVVLTTGTFL GVIH+G K GR GD PS +L Sbjct: 125 ADDLIVEGDTVKGVVTQMGIRFDAKTVVLTTGTFLGGVIHVGLEKSSGGRAGDPPSIALA 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + GRLKTGTP R+D +++ + Q D SFM D + Q+ C I Sbjct: 185 QRLRELKLPVGRLKTGTPPRIDARSVDFSVMTPQPGDFPSPVMSFMGDVSMHPEQVNCYI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II + S +Y+G I+ GPRYCPSIEDKI RF +++ HQ+FLEPEGL+T Sbjct: 245 THTNEKTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFSDKDSHQVFLEPEGLDT 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNGIST+LP ++Q + +R+I G+E +I+RPGYAIEYDY NP+ L TLETK I+G Sbjct: 305 HELYPNGISTSLPFDVQFELVRSIRGMENAHILRPGYAIEYDYFNPQALKFTLETKAING 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQINGTTGYEEA AQGL+AG+N+AR++ + + R +Y+GV++DDL + G E Sbjct: 365 LYFAGQINGTTGYEEAGAQGLLAGLNAARRAWEQEEWTPKRDQAYMGVLVDDLITLGTKE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT IG +LG + + R + + ++ S L+ + Sbjct: 425 PYRMFTSRAEYRLMLREDNADQRLTTIGRELGLVDDVRWAAYCEKMEAVERETSRLQHVW 484 Query: 483 LTSKNLSS---TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 N ++ K +A + L P+ + + + + S V E+++I Sbjct: 485 AAPNNPMGKKFVEMTGADLSKECSAIDLLKRPNINFGQIAELT--GSEVSQQVGEQIEIA 542 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ + ++K E+ IP DFDY + LS E+ +KL ++P L QAS+I Sbjct: 543 VKYEGYINRQHEDVAQLKRLEETKIPADFDYDVVSGLSREITQKLKTVRPETLAQASRIP 602 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+TPAA+ L++I I+KN + Sbjct: 603 GVTPAAVQLVMITIRKNNM 621 >gi|330794085|ref|XP_003285111.1| hypothetical protein DICPUDRAFT_5571 [Dictyostelium purpureum] gi|325084937|gb|EGC38354.1| hypothetical protein DICPUDRAFT_5571 [Dictyostelium purpureum] Length = 608 Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust. Identities = 292/620 (47%), Positives = 400/620 (64%), Gaps = 34/620 (5%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDG 67 V+VIGGGHAG EA A+++GA T LIT +TIG MSCNP+IGG+GKG+LV EIDAL G Sbjct: 1 VVVIGGGHAGTEACTAASRVGADTLLITQTINTIGVMSCNPSIGGVGKGNLVTEIDALGG 60 Query: 68 LMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGF 127 +MG+ AD +G FR+LN KG AV GPR Q DRELY+ ++ + + E L + +G V Sbjct: 61 IMGKAADESGCLFRILNSSKGSAVHGPRAQIDRELYQESIHNILSTYEKLSIREGMVEDL 120 Query: 128 -------NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 N K I + +QD ++++ VV+TTGTFL GVIH+G +IPAGR+GD + Sbjct: 121 LLDESDPNNRKVI--GVSLQDGTIVKTKKVVITTGTFLGGVIHLGNKRIPAGRIGDQAAT 178 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI--TNRQI 238 +L + + F+ GRLKTGTP RLDG TI ++ E Q DE PFSF K+ Q+ Sbjct: 179 ALSVTLERIGFELGRLKTGTPPRLDGSTINYEGLEIQNGDEIPTPFSFSNRKVKYNQSQL 238 Query: 239 ECGITRTNLETHRIIMENIKHSAIY-SGDI-KSYGPRYCPSIEDKIVRFGERNGHQIFLE 296 C +TRTN E+H+II+EN+ + SG+ K GPRYCPSIE K+ RF E HQI+LE Sbjct: 239 ACHMTRTNEESHKIILENLDSRPVLDSGENGKGLGPRYCPSIETKLERF-EGKFHQIWLE 297 Query: 297 PEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLE 356 PEG NTDVVYPNGIS +LPE++Q +F+R+I GLE V ++RPGYAIEYDYI+P+EL TLE Sbjct: 298 PEGFNTDVVYPNGISMSLPEDVQLKFLRSIQGLENVRMLRPGYAIEYDYIDPRELKHTLE 357 Query: 357 TKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARK-SNKLDCICFSRTDSYIGVMIDDL 415 TKKI+GL+LAGQINGTTGYEEA AQG++AGIN+ + + SR++ Y+GV++DDL Sbjct: 358 TKKINGLYLAGQINGTTGYEEAGAQGILAGINAGLSIDEEKQQMVISRSEGYLGVLVDDL 417 Query: 416 TSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGER------RQKRFAKYIQ 469 + GV EPYRMFTSR+E+RISLR NAD RLT K G + ++K+ + Sbjct: 418 VTVGVDEPYRMFTSRSEFRISLRAHNADMRLTEKAYKFGSASKEQYENLLKKKKIISDVL 477 Query: 470 EY---NFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDAR 526 E+ + S LK+L + K+ S + + + R F + ++L P+ Sbjct: 478 EFLSVEYKPSELKTLGINVKDKMSLADTIAK----RKEVNFEHFRHLIPKDLMDNLPEE- 532 Query: 527 KFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSI 586 I ++ E Y Y+ + +E ++++ E LIP+ FD++ + LS ELK+KLS Sbjct: 533 -----YIPLIESECRYMEYSSKHTVEMEKLRNREDSLIPESFDFNEIGQLSTELKQKLSK 587 Query: 587 LKPFNLLQASKIEGMTPAAL 606 ++P ++ AS+I GMTP AL Sbjct: 588 IRPTSIAAASRISGMTPTAL 607 >gi|169795494|ref|YP_001713287.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Acinetobacter baumannii AYE] gi|205831482|sp|B0V7I0|MNMG_ACIBY RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|169148421|emb|CAM86287.1| glucose-inhibited division protein A [Acinetobacter baumannii AYE] Length = 626 Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust. Identities = 289/619 (46%), Positives = 389/619 (62%), Gaps = 6/619 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GK HLVREID Sbjct: 5 KVYDVIVIGGGHAGTEAALAAARMGRQTLLLTHNIETLGQMSCNPAIGGIGKSHLVREID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M AD GIQFR+LN +KG AVR R QADR Y+ A++ + +Q NLD+ Q Sbjct: 65 ALGGAMALAADKGGIQFRILNSRKGAAVRATRAQADRVRYKAAIRETLENQANLDIFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 E + + +V Q TVVLTTGTFL GVIH+G K GR GD PS +L Sbjct: 125 ADDLIVEGDTVKGVVTQMGIRFDAKTVVLTTGTFLGGVIHVGLEKSSGGRAGDPPSIALA 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + GRLKTGTP R+D +++ + Q D SFM D + Q+ C I Sbjct: 185 QRLRELKLPVGRLKTGTPPRIDARSVDFSVMTTQPGDFPSPVMSFMGDVSMHPEQVNCYI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II + S +Y+G I+ GPRYCPSIEDKI RF +++ HQ+FLEPEGL+T Sbjct: 245 THTNEKTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFSDKDSHQVFLEPEGLDT 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNGIST+LP ++Q + +R+I G+E +I+RPGYAIEYDY NP+ L TLETK I+G Sbjct: 305 HELYPNGISTSLPFDVQFELVRSIRGMENAHILRPGYAIEYDYFNPQALKFTLETKAING 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQINGTTGYEEA AQGL+AG+N+AR++ + + R +Y+GV++DDL + G E Sbjct: 365 LYFAGQINGTTGYEEAGAQGLLAGLNAARRAWEQEEWTPKRDQAYMGVLVDDLITLGTKE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT IG +LG + + R + + ++ S L+ + Sbjct: 425 PYRMFTSRAEYRLMLREDNADQRLTTIGRELGLVDDVRWAAYCEKMEAVERETSRLQHVW 484 Query: 483 LTSKNLSS---TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 N ++ K +A + L P+ + + + + S V E+++I Sbjct: 485 AAPNNPMGKKFVEMTGADLSKECSAIDLLKRPNINFGQIAELT--GSEVSQQVGEQIEIA 542 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ + ++K E+ IP DFDY + LS E+ +KL ++P L QAS+I Sbjct: 543 VKYEGYINRQHEDVAQLKRLEETKIPADFDYDVVSGLSREITQKLKTVRPETLAQASRIP 602 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+TPAA+ L++I I+KN + Sbjct: 603 GVTPAAVQLVMITIRKNNM 621 >gi|189499008|ref|YP_001958478.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Chlorobium phaeobacteroides BS1] gi|189494449|gb|ACE02997.1| glucose inhibited division protein A [Chlorobium phaeobacteroides BS1] Length = 623 Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust. Identities = 286/625 (45%), Positives = 392/625 (62%), Gaps = 20/625 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IV G GHAGCEAA A++G LIT S I MSCNPAIGG+ KG + REIDAL Sbjct: 4 YDLIVAGAGHAGCEAALAGARMGLKCLLITSDFSAIARMSCNPAIGGVAKGQITREIDAL 63 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ DA GIQFR+LN KGPA+ PR QADR Y M++ I + N+D++Q V Sbjct: 64 GGEMGKAIDATGIQFRMLNRSKGPAMHSPRAQADRTNYSAYMRKIIEQETNIDLLQDSVI 123 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGR-MGDSPSNSLFN 184 T + + ++ I V+L+ GTFL G+IHIG P GR + + P L Sbjct: 124 RIATNQGTCNGAIVSSGRTIEAKAVILSCGTFLNGLIHIGMNHYPGGRTIAEPPVQGLTE 183 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGIT 243 S F+ GRLKTGTP R+D +++ + + Q D PFSF T+ + R Q+EC +T Sbjct: 184 SLASLGFEHGRLKTGTPPRIDQRSVDYARVSVQPGDRDPSPFSFSTESLAGRKQVECFLT 243 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 T THRI+ E + S ++SG ++ GPRYCPSIEDKI RF E+N H IFLEPEG T+ Sbjct: 244 ATTENTHRILQEGFERSPLFSGKVQGVGPRYCPSIEDKIHRFREKNSHHIFLEPEGFETN 303 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y NG ST+LPE+IQ + +R+IPGLE V ++RPGYAIEYDY P +L PTLETK+I L Sbjct: 304 EMYVNGFSTSLPEDIQLKGLRSIPGLENVIMMRPGYAIEYDYFYPFQLHPTLETKRIKNL 363 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGT+GYEEAAAQG++AGIN+A + + + R+++YIGV+IDDL +K EP Sbjct: 364 YFAGQINGTSGYEEAAAQGIMAGINAALNIRQKEPLILKRSEAYIGVLIDDLITKETNEP 423 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTS AE+RI LR DNAD RL P G G + E + + ++ L+ S+ + Sbjct: 424 YRMFTSSAEHRIILRQDNADLRLMPFGYACGLLSENTYRNLEIKRRNIASVKELISSIRV 483 Query: 484 TSKNLS-------STSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPD-ARKFSSL---- 531 S +++ S SIS G TR A L P ++ +L + P+ A + S + Sbjct: 484 ASDSINALLAEQGSPSIS----GSTRIA-TILKRPKITLSSLVNAFPEVADQISEVTQDN 538 Query: 532 -VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 V+E+++I+ Y Y R+ + A++I + IP F+YS+L LSNE KEKLS +KP Sbjct: 539 TVLEQVEIDCKYEGYIQRERLMAEKIARLDSHRIPASFNYSALKGLSNEGKEKLSKVKPS 598 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 + QAS+I G+TPA +++L++ I + Sbjct: 599 TVGQASRILGVTPADISVLMVKIGR 623 >gi|169633204|ref|YP_001706940.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Acinetobacter baumannii SDF] gi|238688129|sp|B0VLL2|MNMG_ACIBS RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|169151996|emb|CAP00861.1| glucose-inhibited division protein A [Acinetobacter baumannii] Length = 626 Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust. Identities = 290/619 (46%), Positives = 389/619 (62%), Gaps = 6/619 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GK HLVREID Sbjct: 5 KVYDVIVIGGGHAGTEAALAAARMGRQTLLLTHNIETLGQMSCNPAIGGIGKSHLVREID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M AD GIQFR+LN +KG AVR R QADR Y+ A++ + +Q NLD+ Q Sbjct: 65 ALGGAMALAADKGGIQFRILNSRKGAAVRATRAQADRVRYKAAIREILENQANLDIFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 E + + +V Q TVVLTTGTFL GVIH+G K GR GD PS +L Sbjct: 125 ADDLIVEGDTVKGVVTQMGIRFDAKTVVLTTGTFLGGVIHVGLEKSSGGRAGDPPSIALA 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + GRLKTGTP R+D +++ + Q D SFM D + Q+ C I Sbjct: 185 QRLRELKLPVGRLKTGTPPRIDARSVDFSVMTPQPGDFPSPVMSFMGDVSMHPEQVNCYI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II + S +Y+G I+ GPRYCPSIEDKI RF +++ HQ+FLEPEGL+T Sbjct: 245 THTNEKTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFSDKDSHQVFLEPEGLDT 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNGIST+LP ++Q + +R+I G+E +I+RPGYAIEYDY NP+ L TLETK I+G Sbjct: 305 HELYPNGISTSLPFDVQFELVRSIRGMENAHILRPGYAIEYDYFNPQALKFTLETKAING 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQINGTTGYEEA AQGL+AG+N+AR++ + + R +Y+GV++DDL + G E Sbjct: 365 LYFAGQINGTTGYEEAGAQGLLAGLNAARRAWEQEEWTPKRDQAYMGVLVDDLITLGTKE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT IG +LG + + R + + ++ S L+ L Sbjct: 425 PYRMFTSRAEYRLMLREDNADQRLTTIGRELGLVDDVRWAAYCEKMEAVERETSRLQHLW 484 Query: 483 LTSKNLSS---TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 N ++ K +A + L P+ + + + + S V E+++I Sbjct: 485 AAPNNPMGKKFVEMTGADLSKECSAIDLLKRPNINFGQIAELT--GSEVSQQVGEQIEIA 542 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ + ++K E+ IP DFDY + LS E+ +KL ++P L QAS+I Sbjct: 543 VKYEGYINRQHEDVAQLKRLEETKIPADFDYDVVSGLSREITQKLKTVRPETLAQASRIP 602 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+TPAA+ L++I I+KN + Sbjct: 603 GVTPAAVQLVMITIRKNNM 621 >gi|171462843|ref|YP_001796956.1| glucose inhibited division protein A [Polynucleobacter necessarius subsp. necessarius STIR1] gi|238692827|sp|B1XSC4|MNMG_POLNS RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|171192381|gb|ACB43342.1| glucose inhibited division protein A [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 640 Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust. Identities = 286/628 (45%), Positives = 399/628 (63%), Gaps = 14/628 (2%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 ++++DVIV+GGGHAG EAA +A++G T LITH +G+MSCNP+IGG+GKGHLV+EI Sbjct: 4 SKNFDVIVVGGGHAGTEAALASARMGCDTLLITHSIENLGAMSCNPSIGGIGKGHLVKEI 63 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DA+ G M D AGIQFR+LN KGPAVR R Q DR LY+ A++R + +Q NL + Q Sbjct: 64 DAMGGAMAAATDEAGIQFRILNSSKGPAVRATRAQGDRVLYKAAIRRRLENQPNLSLFQA 123 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 V + + + +V Q VVLT GTFL G IH+G GR GD + SL Sbjct: 124 AVDDLPVKGDEVQGVVTQMGLEFMAKKVVLTAGTFLDGKIHVGLNNYAGGRAGDPAAVSL 183 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQIEC 240 + GRLKTGTP R+DG TI + +Q D +P FS++ + +Q+ C Sbjct: 184 SARLKELKLPQGRLKTGTPPRIDGLTIDFSVMLEQPGDLDPVPVFSYLGRPEQHPKQVPC 243 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 I+ TN +TH II + S +Y+G IK GPRYCPSIEDKI RF RN HQIFLEPEGL Sbjct: 244 WISHTNEKTHDIIRGGLDRSPMYTGVIKGVGPRYCPSIEDKIHRFASRNSHQIFLEPEGL 303 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T+ YPNGIST+LP ++Q +R+I G+E I+RPGYAIEYD+ +P++L +LETK I Sbjct: 304 TTNEFYPNGISTSLPFDVQWDLVRSIRGMESAVIVRPGYAIEYDFFDPRQLRHSLETKVI 363 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GL+ AGQINGTTGYEEAAAQG++AGIN+ + + R++SYIGV++DDL ++GV Sbjct: 364 GGLYFAGQINGTTGYEEAAAQGMLAGINAGLAAKGKEPWLPKRSESYIGVLVDDLIARGV 423 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+SLR DNAD RLT IG LG + + R F + + + S L++ Sbjct: 424 QEPYRMFTSRAEYRLSLREDNADMRLTAIGRDLGLVDDYRWGVFCRKQEAVSRETSRLQN 483 Query: 481 LVLTSKNLSSTSIS--FKQDGKTRTAY-EFLSYPDFSIQNLFSI-----CPDARK----F 528 + + K+ ++ +S QD ++ E L P + +++ ++ P+ Sbjct: 484 IWVGPKSEAAPFVSQLLDQDLSHESSLAELLRRPGVTYESIIALGDGMWAPETLDEDLGL 543 Query: 529 SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 ++ + ++++I Y Y RQ E + E L+P+ DYS + LS E+++KL++ K Sbjct: 544 AAQISDQVEISVKYQGYIERQATEIARQEHNETLLLPESLDYSQVIGLSKEVQQKLNLHK 603 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIKKN 616 P L QA +I G+TPAAL+LLL+++KK+ Sbjct: 604 PETLGQAGRISGVTPAALSLLLVHLKKD 631 >gi|15896964|ref|NP_350313.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium acetobutylicum ATCC 824] gi|21263674|sp|Q97CW3|MNMG_CLOAB RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|15026840|gb|AAK81653.1|AE007868_9 Glucose-inhibited division protein, GIDA (NAD/FAD-utilizing enzyme) [Clostridium acetobutylicum ATCC 824] gi|325511141|gb|ADZ22777.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium acetobutylicum EA 2018] Length = 626 Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust. Identities = 278/614 (45%), Positives = 392/614 (63%), Gaps = 9/614 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAGCEAA A+++G T + T +I M CNP IGG KGHLV+EIDAL Sbjct: 9 YDVIVIGGGHAGCEAALAASRMGCRTLMCTMNLDSIAMMPCNPNIGGTAKGHLVKEIDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG D IQ R+LN+ KGPAV R QAD+ Y M+ + +QE+L + Q EV Sbjct: 69 GGEMGVNIDKTFIQSRMLNISKGPAVHSLRAQADKVRYSEVMRNVLENQEDLYLRQIEVI 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + E + IV ++ + +T+VL TGT+LR I IG++ G G P+N L S Sbjct: 129 SLDIEDGKVKGIVTKNGACFTANTIVLATGTYLRSRIIIGEVNYSGGPSGLFPANELSQS 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + R KTGTPAR++ +++ + K +Q DER+IPFSF+ DK+ QI C +T T Sbjct: 189 LIDVGIKLRRFKTGTPARINKRSVDFSKMVEQPGDERIIPFSFLNDKLEKEQISCYLTYT 248 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N +TH +I ENI S +Y+G IKS GPRYCPSIEDK++RF ++ HQIF+EPEG NT+ + Sbjct: 249 NEKTHEVIKENIDRSPLYNGTIKSVGPRYCPSIEDKVMRFPDKQQHQIFIEPEGENTNDL 308 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+S++LPEE+Q + ++T+PGLE V I++ YAIEYD I+P +L +LE K + GLF Sbjct: 309 YVGGMSSSLPEEVQIKMLKTVPGLEDVEILKTAYAIEYDCIDPTQLKLSLEFKDVKGLFG 368 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ NG++GYEEAA+QG++AGIN+A + + R+D YIGV+IDDL +KG EPYR Sbjct: 369 AGQFNGSSGYEEAASQGIIAGINAALMVKNKEPLILGRSDGYIGVLIDDLVTKGTNEPYR 428 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 M TSRAEYR+ LR DNAD RLT +G K+G + E R ++F + LK + +T+ Sbjct: 429 MMTSRAEYRLLLRQDNADLRLTELGHKIGLVDENRYEKFIGRKNAIEEELNRLKKVQITN 488 Query: 486 KNLSST------SISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 K + S+S K K + YE + P+ L ++ D + + +I+ + I Sbjct: 489 KKEVNDFLEGLGSVSLK---KPISLYELIRRPELDYDKLQTLDIDRKDLAQDIIDEVNIM 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y +Q+ + + K EKR+IP+D DY+S+ L E +KLS L+P NL QAS+I Sbjct: 546 IKYEGYIEKQLEQVDQFKKFEKRVIPEDIDYNSIKNLRTEAIQKLSKLRPVNLGQASRIS 605 Query: 600 GMTPAALNLLLIYI 613 G++P+ +++L+IY+ Sbjct: 606 GVSPSDISVLMIYL 619 >gi|24753758|gb|AAN64006.1|AF434658_3 glucose inhibited division protein A [Leptospira interrogans] Length = 635 Score = 537 bits (1383), Expect = e-150, Method: Compositional matrix adjust. Identities = 278/622 (44%), Positives = 386/622 (62%), Gaps = 23/622 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D +V+G GHAG EAA +++K GA T LIT TIG MSCNPAIGG+ KGH+VRE+DAL Sbjct: 14 FDCVVVGAGHAGSEAAYISSKGGARTLLITMNLDTIGQMSCNPAIGGIAKGHMVREVDAL 73 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+MG++ D GIQF++LN KGP+V PR QA+++ Y+L ++ + +++NL + Q V Sbjct: 74 GGIMGKMIDNTGIQFKMLNTSKGPSVWAPRAQAEKKEYQLKVKHTLEAEKNLSIRQDTVE 133 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + I + V+LTTGTFL ++HIG + GRM + L S Sbjct: 134 ELIIENDQVIGVRTGRGFEIFTNHVILTTGTFLSSLVHIGTYQNENGRMCEPTVKGLSKS 193 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 K++ GRLKTGTP R+ ++ Q D PFSF TDKIT +QI C IT T Sbjct: 194 LAKYNLKLGRLKTGTPPRIHKNSVDLSVLTIQEGDSNPSPFSFSTDKITRKQIPCFITYT 253 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N ETH++I EN+ S +YSG I+S GPRYCPSIEDK+VRF +R HQ+FLEPEG T + Sbjct: 254 NAETHKLIHENLNLSPMYSGQIQSTGPRYCPSIEDKVVRFADRERHQVFLEPEGYETSEI 313 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG+ST+LPEE+Q + +R++ GLE I+RPGYAIEYDY++P EL PTLETKKI GL+ Sbjct: 314 YLNGVSTSLPEEVQWKLVRSLKGLENAEIVRPGYAIEYDYVDPTELKPTLETKKIKGLYH 373 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAAAQGLVA + L + F R++SYIGV+IDDL KGV +PYR Sbjct: 374 AGQINGTTGYEEAAAQGLVAAYSVLHSLRNLTPLLFKRSESYIGVLIDDLVHKGVEDPYR 433 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL---- 481 M TSRAE+R+ LR DNAD RL G LG + ++ + + N +R + + Sbjct: 434 MLTSRAEHRLLLRQDNADQRLMKYGYDLGLVDQKSYDCMKEKYERVNSVREKIYQIPLKP 493 Query: 482 ------VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIER 535 +L K +++ K D FL P+ I+++ + + +S L Sbjct: 494 SDEFQNLLDQKGITNYKFGMKLDS-------FLKRPEIKIKDIEFMISEVSSWSDLEKSV 546 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRL---IPKDFDYSSLPALSNELKEKLSILKPFNL 592 L++E Y Y R++ + I+++ K L IP+D +Y + L E +KL KP L Sbjct: 547 LEMEIKYEGYIKREL---ETIQWKNKYLDLAIPEDINYEMIAGLKKEAIQKLKSHKPMTL 603 Query: 593 LQASKIEGMTPAALNLLLIYIK 614 +AS+I G+ P+ ++L+L +IK Sbjct: 604 EKASQISGVDPSDVDLILYHIK 625 >gi|288554600|ref|YP_003426535.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus pseudofirmus OF4] gi|288545760|gb|ADC49643.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus pseudofirmus OF4] Length = 628 Score = 536 bits (1382), Expect = e-150, Method: Compositional matrix adjust. Identities = 280/617 (45%), Positives = 396/617 (64%), Gaps = 10/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+G GHAG EA +A++GA+T ++T + M CNP++GG KG +VREIDAL Sbjct: 8 FDVIVVGAGHAGVEAGLASARMGANTLMLTLNLDAVAFMPCNPSVGGPAKGIVVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MGR D IQ R+LN KGPAVR R QAD+ LY+ M++ I QENL + QG V Sbjct: 68 GGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFLYQHEMKKTIEEQENLLLRQGMVE 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E ++ + R ++VV+TTGT+LRG I +G+L +G PS L Sbjct: 128 RLIIEDGECRGVITNTGAEYRSTSVVITTGTYLRGKIILGELAYESGPNNMQPSVQLSYH 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + FD R KTGTP R++G TI +DKTE Q D+ FS+ T K Q+ C +T T Sbjct: 188 LQELGFDMVRFKTGTPPRVNGNTIDYDKTEIQPGDDTPRAFSYETTKYITDQLPCWLTYT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 ETH+II N+ S +YSG I+ GPRYCPSIEDKIVRF ++ HQIFLEPEG NT V Sbjct: 248 GEETHQIINNNLSRSPMYSGMIEGTGPRYCPSIEDKIVRFNDKPRHQIFLEPEGRNTTEV 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+ST+LPE++Q + +++IPGLE+V ++RPGYAIEYD I P +L+PTLETKK+ GLF Sbjct: 308 YVQGLSTSLPEDVQLKILKSIPGLEQVRMMRPGYAIEYDSIVPTQLWPTLETKKVPGLFT 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGT+GYEEAA QG++AGIN+ARK+ +C+ R+++YIGV+IDDL +KG EPYR Sbjct: 368 AGQINGTSGYEEAAGQGIMAGINAARKAKGEECLILDRSEAYIGVLIDDLVTKGTNEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 + TSRAEYR+ LR DNAD RLT G ++G I E R RF E + L+ +++ Sbjct: 428 LLTSRAEYRLLLRHDNADLRLTEKGYEMGLISEDRFNRFELKKAEIAAEKKRLEKIII-- 485 Query: 486 KNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSI--CPDARKFSSLVIERLQI 538 K + ++ G T +A L P+ + ++ + P++ + S V E+++I Sbjct: 486 KPSDEVAAVLQEAGATPLKEAVSAAMLLKRPELTYAHVSKLIEAPES-EISDDVGEQVEI 544 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + Y Y +Q+ + K E + IP+D DY ++ L+ E K+KLS ++P ++ QAS++ Sbjct: 545 QVKYEGYIEKQLQQVDRSKKMESKKIPEDLDYHAINGLATEAKQKLSEVRPLSVGQASRV 604 Query: 599 EGMTPAALNLLLIYIKK 615 G+ PA +++LL+Y+++ Sbjct: 605 SGVNPADISILLVYLEQ 621 >gi|217968661|ref|YP_002353895.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Thauera sp. MZ1T] gi|217505988|gb|ACK52999.1| glucose inhibited division protein A [Thauera sp. MZ1T] Length = 652 Score = 536 bits (1382), Expect = e-150, Method: Compositional matrix adjust. Identities = 294/617 (47%), Positives = 402/617 (65%), Gaps = 8/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA++GA+T L+TH T+G+MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALAAARMGAATLLLTHNIETLGAMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q V Sbjct: 67 GGAMAAATDEGGIQFRILNASKGPAVRATRAQADRVLYKAAIRRRLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + ++ +V Q TVVLT GTFL G++H+G AGR GD P+ SL Sbjct: 127 DLTVVGDRVTGVVTQIGLCFEAPTVVLTAGTFLNGLVHVGMQNYSAGRAGDPPAISLGAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP RLD +TI + Q D+ + FSF+ + RQ+ C +T+ Sbjct: 187 LKELALPQGRLKTGTPPRLDARTIDFSVMTVQPGDDPVPVFSFLGHASQHPRQLPCWMTQ 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH +I N+ S +YSG I+ GPRYCPSIEDKI RF +++ H IFLEPEGL T Sbjct: 247 TNERTHDVIRANLDRSPMYSGVIEGVGPRYCPSIEDKIHRFADKDSHNIFLEPEGLETHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R+I GLE +I+RPGYAIEYDY +P+ L +LETK I GLF Sbjct: 307 IYPNGISTSLPFDVQLQIVRSIRGLENAHILRPGYAIEYDYFDPRNLKSSLETKSIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG N+A + + C R ++Y+GV++DDL ++GV EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGANAALQVQGREPWCPRRDEAYLGVLVDDLITRGVSEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+SLR DNAD RLT G +LG + + R F + + LK+ Sbjct: 427 RMFTSRAEYRLSLREDNADLRLTGKGRELGLVDDVRWAAFCAKREAIERGTAQLKAAWAR 486 Query: 485 SKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI--CPDARKFSSLVIERLQIE 539 + + + + K + + +E L P+ S +L S+ PD R+ + VIE+++I Sbjct: 487 PEAIPAEDQQRVLGKALEREQRYFELLRRPETSYASLMSLPGAPDERETDAQVIEQIEIA 546 Query: 540 SSYAAYTGRQMIE-AKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + Y Y RQ E K+++ E RL P DY+ + LS E+++KL+ KP + QA +I Sbjct: 547 AKYQGYIDRQQDEVTKQMQAEATRL-PVGLDYAQVRGLSKEVQQKLNQHKPETIGQAGRI 605 Query: 599 EGMTPAALNLLLIYIKK 615 +G+TPAA++LLL+++K+ Sbjct: 606 QGVTPAAISLLLVWLKR 622 >gi|119896433|ref|YP_931646.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Azoarcus sp. BH72] gi|166222905|sp|A1K1Q4|MNMG_AZOSB RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|119668846|emb|CAL92759.1| glucose inhibited division protein A [Azoarcus sp. BH72] Length = 634 Score = 536 bits (1382), Expect = e-150, Method: Compositional matrix adjust. Identities = 292/618 (47%), Positives = 399/618 (64%), Gaps = 10/618 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA++G T L++H T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALAAARMGCRTLLLSHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN KGPAVR R QADR LY+ A+++ + +Q NL + Q V Sbjct: 67 GGAMAAATDEGGIQFRILNASKGPAVRATRAQADRVLYKAAIRKRLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + ++ +V Q VVLT GTFL G+IH+G AGR GD P+ SL Sbjct: 127 DLTVAGDRVTGVVTQIGLRFEAPAVVLTAGTFLNGLIHVGLEHYSAGRAGDPPAISLGQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP RLD ++I + Q D+ + FSF+ + Q+ C +T Sbjct: 187 LKELALPQGRLKTGTPPRLDARSIDFSVMTVQPGDDPVPVFSFLGSAAQHPAQLPCWMTH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH +I N+ S +YSG I+ GPRYCPSIEDKI RF +++ H IFLEPEGL T Sbjct: 247 TNTRTHDVIRANLDRSPMYSGVIEGVGPRYCPSIEDKIHRFADKDSHNIFLEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q + +R+I GLE +I+RPGYAIEYDY +P+ L +LETK I GLF Sbjct: 307 IYPNGISTSLPFDVQLEIVRSIRGLENAHILRPGYAIEYDYFDPRNLKSSLETKSIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG N+A + + C R ++Y+GV++DDL ++GV EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGANAALQVQGREAWCPRRDEAYLGVLVDDLITRGVSEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + + LK+ L Sbjct: 427 RMFTSRAEYRLQLREDNADLRLTEKGRELGLVDDVRWAAFCAKREAIERETARLKT-SLA 485 Query: 485 SKNLSSTSISFKQDGKT--RTA--YEFLSYPDFSIQNLFSI--CPDARKFSSLVIERLQI 538 +L + + GKT R A +E L P+ + +L S+ P+ + V+E+L+I Sbjct: 486 RPDLIPVADQERVLGKTLEREARYFELLRRPETTYASLMSLPGAPEQPETDPQVVEQLEI 545 Query: 539 ESSYAAYTGRQMIE-AKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 + Y Y RQ E AK+++ E RL P D DY+ + LS E+++KL++ KP + QA + Sbjct: 546 AAKYQGYIDRQQDEVAKQLQAESTRL-PADLDYAEVRGLSKEVQQKLNLHKPETIGQAGR 604 Query: 598 IEGMTPAALNLLLIYIKK 615 I+G+TPAA++LLL+++K+ Sbjct: 605 IQGITPAAISLLLVWLKR 622 >gi|303240050|ref|ZP_07326571.1| glucose inhibited division protein A [Acetivibrio cellulolyticus CD2] gi|302592319|gb|EFL62046.1| glucose inhibited division protein A [Acetivibrio cellulolyticus CD2] Length = 629 Score = 536 bits (1382), Expect = e-150, Method: Compositional matrix adjust. Identities = 278/621 (44%), Positives = 392/621 (63%), Gaps = 7/621 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+V+G GHAGCEAA +A+LG TA+ +IG+M CNP IGG KGHLVREIDAL Sbjct: 8 YDVVVVGAGHAGCEAALASARLGVKTAVFAINLDSIGNMPCNPNIGGTAKGHLVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ D IQ ++LN KGPAV R Q DR Y++ M+ + QENLDV Q E+ Sbjct: 68 GGEMGKNTDKTFIQSKILNSAKGPAVYSLRAQVDRRSYQIEMKHTLEKQENLDVKQAEII 127 Query: 126 GFNTE----KNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 E K I+ + S+ C ++LTTGT+L+G I IG + G G P+N Sbjct: 128 EILREEKDGKFKITGVKTHTGSIYNCKAIILTTGTYLKGKIIIGDVSYSGGPDGLFPANK 187 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L +S + + RLKTGTPARL+ ++I + K E+Q D+ ++PFSF ++I Q+ C Sbjct: 188 LSDSLKEMGIELLRLKTGTPARLNRRSIDFSKMEEQPGDDTIVPFSFENEEIKKEQVSCY 247 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN ETH II EN+ S +Y G I+ GPRYCPSIEDK+VRF E+ HQ+F+EP GLN Sbjct: 248 LTYTNSETHSIIRENLHRSPLYGGMIEGIGPRYCPSIEDKVVRFAEKESHQVFVEPMGLN 307 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T +Y G+ST+LPE++Q + ++T+PGLE V+++R YAIEYD IN +L +LE K I Sbjct: 308 TQEMYLQGMSTSLPEDVQIKMMKTLPGLENVSVMRNAYAIEYDGINSTQLNLSLEFKHID 367 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQING++GYEEA +QG++AGIN+ARK + + R+++YIGV+IDDL +KG Sbjct: 368 GLFSAGQINGSSGYEEAGSQGIMAGINAARKVKGEEPVILDRSEAYIGVLIDDLVTKGTK 427 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRM TSR+EYR+ LR DNAD RLTPIG + G I E R ++F E L+ Sbjct: 428 EPYRMMTSRSEYRLLLRQDNADIRLTPIGYRAGLISEERYRKFEIKKMEIEEEIKRLERT 487 Query: 482 VLTSKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 + + + K ++ + L P+ +L +I + + S V E++ I Sbjct: 488 HVPPSEKVNAFLESKNSTPIKSGMKLSDLLKRPELDYDSLGAIDENRPELSFQVREQVSI 547 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 Y Y RQM++ ++ K E R + KD DY ++ L E ++KL+ +KP ++ QAS+I Sbjct: 548 TIKYEGYIKRQMLQVEQFKKLENRKLSKDLDYIAIQGLRLEARQKLNQVKPESVGQASRI 607 Query: 599 EGMTPAALNLLLIYIKKNTVK 619 G++PA +++LLIY+++N K Sbjct: 608 SGVSPADISVLLIYLEQNRRK 628 >gi|294668652|ref|ZP_06733748.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291309414|gb|EFE50657.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 631 Score = 536 bits (1382), Expect = e-150, Method: Compositional matrix adjust. Identities = 292/619 (47%), Positives = 397/619 (64%), Gaps = 8/619 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 8 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 67 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY+ A++ + +QENLD+ Q Sbjct: 68 ALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKAAIREMLENQENLDLFQQS 127 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + N IS ++ + VVLT GTFL G IHIG GR GD + SL Sbjct: 128 VDDVTLDGNRISGVITAMGVEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 187 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + + GRLKTGTP R+DG+TI + + +Q D + FS + ++ RQ+ C I Sbjct: 188 GRLRELNLPQGRLKTGTPPRIDGRTIDFSRLTEQPGDTPVPVFSVRGNAEMHPRQVSCWI 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TNL TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEGL T Sbjct: 248 THTNLHTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEGLTT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK I G Sbjct: 308 HEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKTIQG 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AG N+ + + D + R +Y+GV++DDL +KGV E Sbjct: 368 LFFAGQINGTTGYEEAAAQGLLAGANAVQYIREQDPLLLRREQAYLGVLVDDLITKGVNE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + + LK+ Sbjct: 428 PYRMFTSRAEYRLQLREDNADMRLTEDGYKIGLVGEAQWRMFNEKREAIEREIQRLKTTW 487 Query: 483 LTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL---VIERL 536 T + L+ + ++ + ++ L P+ L ++ PDA+ ++L V+E++ Sbjct: 488 YTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTL-PDAQPETALADSVVEQV 546 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y Y RQ E + E +P+D DYS + LS E+++KL+ KP + QAS Sbjct: 547 EIQVKYQGYIDRQNEEIDSRRDIETLKLPEDIDYSKVKGLSAEVQQKLNQHKPETVGQAS 606 Query: 597 KIEGMTPAALNLLLIYIKK 615 +I G+TPAA+ LL++++K+ Sbjct: 607 RISGVTPAAVTLLMVHLKR 625 >gi|187930588|ref|YP_001901075.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ralstonia pickettii 12J] gi|238691852|sp|B2UGW0|MNMG_RALPJ RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|187727478|gb|ACD28643.1| glucose inhibited division protein A [Ralstonia pickettii 12J] Length = 649 Score = 536 bits (1382), Expect = e-150, Method: Compositional matrix adjust. Identities = 288/629 (45%), Positives = 386/629 (61%), Gaps = 15/629 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALAAARMGCQTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 67 GGAMAIATDEGGIQFRILNSSKGPAVRATRAQADRVLYKAAIRHRLENQPNLMLFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 127 DLVVEGDRVIGAVTQVGVQFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFM-TDKITNRQIECGIT 243 + GRLKTGTP R+DG++I + E+Q D +P FSFM + RQ+ C +T Sbjct: 187 LKELKLPQGRLKTGTPPRIDGRSIDFSVLEEQPGDLDPVPVFSFMGRADMHPRQVPCWVT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T+ Sbjct: 247 HTNERTHDIIRAGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLATN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNG+ST+LP ++Q I ++ GLE +I+RPGYAIEYDY +P+ L +LE+K ISGL Sbjct: 307 EFYPNGVSTSLPFDVQLDLIHSMRGLENAHILRPGYAIEYDYFDPRGLKASLESKAISGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ + D R +Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGINAGLQVQGKDAWTPRRDQAYLGVLVDDLITRGVTEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R+SLR DNAD RLT +G LG + + R F + + LKS + Sbjct: 427 YRMFTSRAEFRLSLREDNADMRLTEVGRTLGVVDDARWDAFNRKRDAVSRETERLKSTWV 486 Query: 484 TSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI--------CPDARK--FSS 530 L + + K + + L P+ + + L + P A + Sbjct: 487 NPATLPLEDAEPVLGKGIEREYALADLLRRPNVTYETLVGMQGGKYALESPLAEDPLLAE 546 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 + E+++I Y Y RQ E + + E +P DFDYS + LS E+++KL+ KP Sbjct: 547 QIREQVEIGIKYHGYIARQADEVERLGANENTRLPADFDYSQVRGLSIEVQQKLAKHKPE 606 Query: 591 NLLQASKIEGMTPAALNLLLIYIKKNTVK 619 + QAS+I G+TPAA++LLL+++KK ++ Sbjct: 607 TIGQASRISGITPAAVSLLLVHLKKGVLR 635 >gi|209515787|ref|ZP_03264650.1| glucose inhibited division protein A [Burkholderia sp. H160] gi|209503814|gb|EEA03807.1| glucose inhibited division protein A [Burkholderia sp. H160] Length = 652 Score = 536 bits (1382), Expect = e-150, Method: Compositional matrix adjust. Identities = 284/626 (45%), Positives = 388/626 (61%), Gaps = 15/626 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++G T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALASARMGNKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D +GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 67 GGAMAAATDESGIQFRILNSSKGPAVRATRAQADRVLYKAAIRHRLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 127 DLMVEGDRVVGAVTQVGIRFRSRAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTD-KITNRQIECGIT 243 + GRLKTGTP R+DG+TI + + E+Q D +P FSF+ + RQ+ C +T Sbjct: 187 LKELKLPQGRLKTGTPPRIDGRTIDYSQLEEQPGDLDPVPVFSFLGRVEQHPRQVPCWVT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQI+LEPEGL T+ Sbjct: 247 HTNQRTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIYLEPEGLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP ++Q + +R++ GLE +I+RPGYAIEYDY +P+ L +LETK I GL Sbjct: 307 EFYPNGISTSLPFDVQLELVRSMRGLEHAHILRPGYAIEYDYFDPRGLKASLETKVIGGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQG +AGIN+ + C R +Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGALAGINAGLFVQGKEAWCPRRDQAYLGVLVDDLVTRGVSEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F + + L+S + Sbjct: 427 YRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDDVRWDAFNRKRDAVSRETQRLRSTWV 486 Query: 484 TSKNLS---STSISFKQDGKTRTAYEFLSYPDFSIQNLFSI------CPDARKFSSLVI- 533 K LS +T++ K + + L P S + + P+A +++ Sbjct: 487 NPKTLSADEATALLGKPIDHEYSLADLLRRPGVSYDGVCGLRNGACGAPEALAEDPVLLA 546 Query: 534 ---ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 E+++I Y Y RQ E + + +E +P+ DY+ + LS E ++KL +P Sbjct: 547 QIKEQIEIGVKYQGYIDRQADEIERNEAQENTRLPEGLDYTEVRGLSFEARQKLMQFRPE 606 Query: 591 NLLQASKIEGMTPAALNLLLIYIKKN 616 + QAS+I G+TPAA++LL++++K+ Sbjct: 607 TIGQASRISGITPAAISLLMVHLKRG 632 >gi|145588204|ref|YP_001154801.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|189039349|sp|A4SUS3|MNMG_POLSQ RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|145046610|gb|ABP33237.1| glucose inhibited division protein A [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 639 Score = 536 bits (1382), Expect = e-150, Method: Compositional matrix adjust. Identities = 285/636 (44%), Positives = 397/636 (62%), Gaps = 14/636 (2%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 ++++DVIV+GGGHAG EAA +A++G T LITH +G+MSCNP+IGG+GKGHLV+EI Sbjct: 4 SKNFDVIVVGGGHAGTEAALASARMGCDTLLITHSIENLGAMSCNPSIGGIGKGHLVKEI 63 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DA+ G M D AGIQFR+LN KGPAVR R Q DR LY+ A++R + +Q NL + Q Sbjct: 64 DAMGGAMAAATDEAGIQFRILNSSKGPAVRATRAQGDRVLYKAAIRRRLENQPNLSLFQA 123 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 V + + + +V Q VVLT GTFL G IH+G GR GD + SL Sbjct: 124 AVDDLLVKGDEVQGVVTQMGLEFMAKKVVLTAGTFLDGKIHVGLNNYAGGRAGDPAAVSL 183 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQIEC 240 + GRLKTGTP R+DG+TI + +Q D +P FS++ + +Q+ C Sbjct: 184 SARLKELKLPQGRLKTGTPPRIDGRTIDFSVMLEQPGDLDPVPVFSYLGRPEQHPKQVPC 243 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 I+ TN +TH II + S +Y+G I+ GPRYCPSIEDKI RF RN HQIFLEPEGL Sbjct: 244 WISHTNEQTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASRNSHQIFLEPEGL 303 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T+ YPNGIST+LP ++Q + +R+I GLE I+RPGYAIEYD+ +P+ L +LETK I Sbjct: 304 TTNEFYPNGISTSLPFDVQWELVRSIRGLESAVIVRPGYAIEYDFFDPRHLRHSLETKAI 363 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GL+ AGQINGTTGYEEAAAQG++AGIN+ + + R++SYIGV++DDL ++GV Sbjct: 364 GGLYFAGQINGTTGYEEAAAQGMLAGINAGLAAQGKEAWLPKRSESYIGVLVDDLITRGV 423 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+SLR DNAD RLT IG LG + + R + F + + + S LK Sbjct: 424 QEPYRMFTSRAEYRLSLREDNADMRLTAIGRDLGLVDDYRWEVFCRKQEAVSRETSRLKD 483 Query: 481 LVLTSKNLSS---TSISFKQDGKTRTAYEFLSYPDFSIQNLFSI---------CPDARKF 528 + + K+ + T + ++ E L P + + + ++ D Sbjct: 484 IWVGPKHEIAPLVTQLLGQELSHECNLTELLRRPGITYEAITALGNRIWAPESLDDDLGL 543 Query: 529 SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 ++ + ++++I Y Y RQ +E + E +P+ DYS + LS E+++KL++ K Sbjct: 544 AAQISDQVEISVKYQGYIERQAVEIARQEHNETFPLPEGLDYSQVLGLSKEVQQKLNLHK 603 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIKKNTVKLNEIV 624 P L QA +I G+TPAAL+LLL+++KK + E + Sbjct: 604 PETLGQAGRISGVTPAALSLLLVHLKKGLGRTQETI 639 >gi|187925874|ref|YP_001897516.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia phytofirmans PsJN] gi|238691589|sp|B2T7L1|MNMG_BURPP RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|187717068|gb|ACD18292.1| glucose inhibited division protein A [Burkholderia phytofirmans PsJN] Length = 652 Score = 536 bits (1382), Expect = e-150, Method: Compositional matrix adjust. Identities = 284/626 (45%), Positives = 389/626 (62%), Gaps = 15/626 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++G +T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALASARMGNTTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 67 GGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRLLYKQAIRHRLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 127 DLMVEGDRVVGAVTQVGIRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTD-KITNRQIECGIT 243 + GRLKTGTP R+DG+TI + + E+Q D +P FSF+ + RQ+ C +T Sbjct: 187 LKELKLPQGRLKTGTPPRIDGRTIDFSQLEEQPGDLDPVPVFSFLGRVEQHPRQVPCWVT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPEGL T+ Sbjct: 247 HTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPEGLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP ++Q + +R++ GLE +I+RPGYAIEYDY +P+ L +LETK I+GL Sbjct: 307 EFYPNGISTSLPFDVQLELVRSMRGLEHAHILRPGYAIEYDYFDPRGLKASLETKVINGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ + C R +Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGINAGLFVQGKEAWCPRRDQAYLGVLVDDLVTRGVSEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F++ + L++ + Sbjct: 427 YRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDDIRWDAFSRKRDAVSRETERLRTTWV 486 Query: 484 TSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI------CPDARKFSSLVI- 533 K L +T + K + + L P S + + P+A +++ Sbjct: 487 NPKTLPADEATPLLGKPIDHEYSLADLLRRPGVSYDGVCGLRAGACAAPEALAEDDVLLA 546 Query: 534 ---ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 E+++I Y Y RQ E + + E +P+ DY+ + LS E ++KL+ +P Sbjct: 547 QIKEQIEIGIKYQGYIDRQAGEIERNEAHESTRLPEGVDYAEVRGLSFEARQKLTQFRPE 606 Query: 591 NLLQASKIEGMTPAALNLLLIYIKKN 616 + QAS+I G+TPAA++LL++++K+ Sbjct: 607 TIGQASRISGITPAAISLLMVHLKRG 632 >gi|260771038|ref|ZP_05879966.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio furnissii CIP 102972] gi|260613927|gb|EEX39118.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio furnissii CIP 102972] gi|315178650|gb|ADT85564.1| glucose inhibited division protein A [Vibrio furnissii NCTC 11218] Length = 631 Score = 536 bits (1381), Expect = e-150, Method: Compositional matrix adjust. Identities = 287/626 (45%), Positives = 386/626 (61%), Gaps = 15/626 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA AA+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHETFDVIVVGGGHAGTEAALAAARTGQRTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAEAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRHTLENTPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q E + + +V Q R VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQAADDLIVENDQVRGVVTQMGLKFRAKAVVLTVGTFLGGKIHIGLENFSGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + F RLKTGTP R+D ++ + E Q D FSFM + + RQI Sbjct: 182 ALAQRLRELPFRVDRLKTGTPPRIDANSVDFSILEAQHGDNPTPVFSFMGKREHHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CFITHTNEKTHDVIRANLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTTELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTFETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 IQGLFFAGQINGTTGYEEAAAQGLMAGLNASLFSQDKEGWSPRRDQAYVGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG I + R RF + I+ R LK Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLINDARWARFNQKIEHMETERQRLK 481 Query: 480 SLVLTSKN--------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL 531 + + L T +S + G+ + L P+ + L S+ A Sbjct: 482 ETWMNPNSDGVDALNALLKTPMSREASGE-----DLLRRPEMTYDLLTSLSAFAPALEDR 536 Query: 532 -VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 E+++I+ Y Y RQ E ++ E +P D DY ++ LSNE+ KL+ KP Sbjct: 537 EAAEQVEIQVKYDGYIQRQQDEIEKSLRHEHTKLPIDLDYKAVKGLSNEVVMKLNNAKPE 596 Query: 591 NLLQASKIEGMTPAALNLLLIYIKKN 616 ++ AS+I G+TPAA+++LL+++KK+ Sbjct: 597 SIGIASRISGITPAAISILLVHLKKH 622 >gi|299769491|ref|YP_003731517.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Acinetobacter sp. DR1] gi|298699579|gb|ADI90144.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Acinetobacter sp. DR1] Length = 626 Score = 536 bits (1381), Expect = e-150, Method: Compositional matrix adjust. Identities = 290/619 (46%), Positives = 388/619 (62%), Gaps = 6/619 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GK HLVREID Sbjct: 5 KVYDVIVIGGGHAGTEAALAAARMGRQTLLLTHNIETLGQMSCNPAIGGIGKSHLVREID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M AD GIQFR+LN +KG AVR R QADR Y+ A++ + +Q NLD+ Q Sbjct: 65 ALGGAMALAADKGGIQFRILNSRKGAAVRATRAQADRVRYKAAIRDTLENQANLDIFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 E + + +V Q TVVLTTGTFL GVIH+G K GR GD PS +L Sbjct: 125 ADDLIVEGDTVKGVVTQMGIRFDAKTVVLTTGTFLGGVIHVGLEKSSGGRAGDPPSIALA 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + GRLKTGTP R+D +++ + Q D SFM D + Q+ C I Sbjct: 185 QRLRELKLPVGRLKTGTPPRIDARSVDFSVMIPQPGDFPSPVMSFMGDASMHPEQVNCYI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II + S +Y+G I+ GPRYCPSIEDKI RF +++ HQ+FLEPEGL+T Sbjct: 245 THTNEKTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFADKDSHQVFLEPEGLDT 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNGIST+LP ++Q + +R+I G+E +I+RPGYAIEYDY NP+ L TLETK I+G Sbjct: 305 HELYPNGISTSLPFDVQFELVRSIRGMENAHILRPGYAIEYDYFNPQALKFTLETKAING 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQINGTTGYEEA AQGL+AG+N+AR++ + + R +Y+GV++DDL + G E Sbjct: 365 LYFAGQINGTTGYEEAGAQGLLAGLNAARRAWEQEEWTPKRDQAYMGVLVDDLITLGTKE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT +G +LG + + R + + ++ S L+ L Sbjct: 425 PYRMFTSRAEYRLMLREDNADQRLTTVGRELGLVDDVRWAAYCEKMEAVERETSRLQHLW 484 Query: 483 LTSKNLSS---TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 N ++ K +A + L P+ S + + + S V E+++I Sbjct: 485 AAPNNPMGKKFVEMTGADLSKECSAIDLLKRPNISFGQIAELT--GSEVSEQVGEQIEIA 542 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ + ++K E+ IP DFDY + LS E+ +KL + P L QAS+I Sbjct: 543 VKYEGYINRQHEDVAQLKRLEETKIPTDFDYDVVSGLSREITQKLKTVLPETLAQASRIP 602 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+TPAA+ L++I I+KN + Sbjct: 603 GVTPAAVQLVMITIRKNNM 621 >gi|50085525|ref|YP_047035.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Acinetobacter sp. ADP1] gi|81170512|sp|Q6F9Q1|MNMG_ACIAD RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|49531501|emb|CAG69213.1| glucose-inhibited division protein A [Acinetobacter sp. ADP1] Length = 626 Score = 536 bits (1381), Expect = e-150, Method: Compositional matrix adjust. Identities = 286/617 (46%), Positives = 388/617 (62%), Gaps = 6/617 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GK HLVREID Sbjct: 5 KVYDVIVIGGGHAGTEAALAAARMGRQTLLLTHNIETLGQMSCNPAIGGIGKSHLVREID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M AD GIQFR+LN +KG AVR R QADR Y+ A++ + +Q NLD+ Q Sbjct: 65 ALGGAMALAADKGGIQFRILNSRKGAAVRATRAQADRVRYKAAIRHTLENQANLDIFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 E + + +V Q TVVLTTGTFL GVIHIG K GR GD PS +L Sbjct: 125 ADDLIVEGDTVKGVVTQMGIRFDTKTVVLTTGTFLGGVIHIGLEKSSGGRAGDPPSIALS 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + + + GRLKTGTP R+D +++ + Q D SFM D + Q+ C I Sbjct: 185 HRLRELNLPVGRLKTGTPPRIDARSVDFSVMTPQPGDFPSPVMSFMGDVSMHPEQVSCYI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II + S +Y+G I+ GPRYCPSIEDKI RF +++ HQ+FLEPEGL+T Sbjct: 245 THTNEKTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFADKDSHQVFLEPEGLDT 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNGIST+LP ++Q + +R+I G+E +I+RPGYAIEYDY NP+ L TLETK I+ Sbjct: 305 HELYPNGISTSLPFDVQFELVRSIRGMENAHILRPGYAIEYDYFNPQALKFTLETKAINN 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQINGTTGYEEA AQGL+AG+N+AR++ + R +Y+GV++DDL + G E Sbjct: 365 LYFAGQINGTTGYEEAGAQGLLAGLNAARRAWDQEQWTPKRDQAYMGVLVDDLITLGTKE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLTP+G ++G + + R + + ++ + L L Sbjct: 425 PYRMFTSRAEYRLMLREDNADQRLTPVGREMGLVDDVRWAAYCEKMEAVETETARLAHLW 484 Query: 483 LTSKNLSS---TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 N ++ K +A + L P+ + + + + S+ V ++++I Sbjct: 485 AAPNNPMGKQFVEMTGADLSKECSAIDLLKRPNINFTQIAELT--GSQVSTQVGDQIEIA 542 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ + ++K E+ IP DFDY + LS E+ +KL ++P L QA +I Sbjct: 543 VKYEGYINRQHEDVAQLKRLEETKIPADFDYDIVSGLSREITQKLKTVRPETLAQAHRIP 602 Query: 600 GMTPAALNLLLIYIKKN 616 G+TPAA+ L++I I+KN Sbjct: 603 GVTPAAVQLVMITIRKN 619 >gi|256829824|ref|YP_003158552.1| glucose inhibited division protein A [Desulfomicrobium baculatum DSM 4028] gi|256579000|gb|ACU90136.1| glucose inhibited division protein A [Desulfomicrobium baculatum DSM 4028] Length = 626 Score = 536 bits (1381), Expect = e-150, Method: Compositional matrix adjust. Identities = 282/618 (45%), Positives = 384/618 (62%), Gaps = 5/618 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + ++D+IV+G GHAGCEAA AA +G T L+T IG +SCNPAIGGL KGH+V+E Sbjct: 6 VPETFDIIVVGAGHAGCEAAMAAAHMGMQTLLLTINADRIGHLSCNPAIGGLAKGHMVKE 65 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G+MG+ AD AGIQFR+LN +KGPAVR R Q DR Y +Q++I + NL V Q Sbjct: 66 IDALGGMMGKWADQAGIQFRILNTRKGPAVRSSRAQIDRAEYVKVVQQDIFTCPNLFVRQ 125 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 A E ++ +V I C +LTTGTFL+G+IH+G GR GD S+ Sbjct: 126 ETAASLTVEDGRVTGVVTTLGETIPCRAALLTTGTFLQGLIHVGLNNFSGGRYGDPASSG 185 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L + F+ GRLKTGT RL ++ + E+Q D PFSF + I +Q+ C Sbjct: 186 LSPRLRELGFELGRLKTGTVPRLLKSSVDYSVMEEQAGDNPPRPFSFDSPGIRLQQLPCF 245 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T T TH II S +++G IK G RYCPSIEDKI RF E++ HQIF+EPEGL Sbjct: 246 VTYTTERTHEIIRTGFDRSPMFTGVIKGTGARYCPSIEDKIARFPEKDRHQIFVEPEGLT 305 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 + VYPNGI T+LP +IQ + +IPGLEK IIRPGYAIEYDY+ P +L PTLE+K + Sbjct: 306 SHEVYPNGIPTSLPLDIQKALVASIPGLEKAQIIRPGYAIEYDYVPPTQLRPTLESKLVR 365 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GL++AGQINGT+GYEEAA QGL A IN+ + +R+ +YI V++DDL +KG L Sbjct: 366 GLYMAGQINGTSGYEEAAGQGLWAAINAVLALRGEPELILTRSQAYIAVLVDDLVTKGTL 425 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAE+R+ LR DNAD RLT IG LG + + R +RF + N + + +++L Sbjct: 426 EPYRMFTSRAEHRLLLREDNADERLTAIGRDLGLVDDSRWQRFTRKQTAVNEIMAGMEAL 485 Query: 482 VL----TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 + ++NL ++ K + E L P+ +I L + P+ F +E + Sbjct: 486 RVRPDAATRNLVE-AMGGTIPQKAVSLKELLRQPELTIDMLTPLWPELENFDGEALEEAE 544 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I++ Y Y RQ + E+ +P+D +Y+ +P LS E+ EKL+ ++P L QA + Sbjct: 545 IKTKYEGYLRRQQELVDRFEKMEQTTLPEDMNYTGIPGLSREVVEKLTRVQPRTLGQAGR 604 Query: 598 IEGMTPAALNLLLIYIKK 615 I G+TPAAL+ L I +KK Sbjct: 605 ISGITPAALSCLEIQLKK 622 >gi|239637282|ref|ZP_04678269.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus warneri L37603] gi|239597119|gb|EEQ79629.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus warneri L37603] Length = 625 Score = 536 bits (1380), Expect = e-150, Method: Compositional matrix adjust. Identities = 276/619 (44%), Positives = 393/619 (63%), Gaps = 3/619 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VREID Sbjct: 3 QEYDVIVIGAGHAGIEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVREID 62 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+ I ++NLD++QG Sbjct: 63 ALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKNVIEDEDNLDIMQGM 122 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + + + + R VV+TTGTFLRG I +G +K +G PS +L Sbjct: 123 VDELIIEDDEVKGVRTNIGTEYRSKAVVITTGTFLRGEIILGNMKYSSGPNHQLPSVTLA 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 ++ F+ R KTGTP R++ KTI + KTE Q D+ FS+ T + Q+ C +T Sbjct: 183 DNLRGLGFEVVRFKTGTPPRVNSKTIDYSKTEIQPGDDVGRAFSYETTEYILEQLPCWLT 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG NT+ Sbjct: 243 YTNDKTHQVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRNTN 302 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETK I L Sbjct: 303 EVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKMIKNL 362 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGT+GYEEAA QG++AGIN+A K + SR+D+YIGV+IDDL +KG EP Sbjct: 363 YTAGQINGTSGYEEAAGQGIMAGINAAGKVLGKEEKILSRSDAYIGVLIDDLVTKGTNEP 422 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G +LG I R +F Q+ L + + Sbjct: 423 YRLLTSRAEYRLLLRHDNADLRLTDLGHELGLISNERYAQFNHKRQQIKDEIQRLTDIRI 482 Query: 484 TSKNLSSTSISFKQDGKTRT---AYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + + + I K + A + L P+ + + I + + S V E+++I++ Sbjct: 483 KPNDHTQSVIEANGGSKLKDGILAIDLLRRPEMTYDTILEILEEDHQLPSEVEEQVEIQT 542 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y + + + +++K E++ IP+D DYS + +L++E +EKL+ +KP N+ QAS+I G Sbjct: 543 KYEGYINKSLQQVEKVKRMEQKKIPEDLDYSKVDSLASEAREKLAEVKPLNIAQASRISG 602 Query: 601 MTPAALNLLLIYIKKNTVK 619 + PA +++LL+Y+++ ++ Sbjct: 603 VNPADISILLVYLEQGKLQ 621 >gi|330685268|gb|EGG96929.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus epidermidis VCU121] Length = 625 Score = 536 bits (1380), Expect = e-150, Method: Compositional matrix adjust. Identities = 276/619 (44%), Positives = 394/619 (63%), Gaps = 3/619 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VREID Sbjct: 3 QEYDVIVIGAGHAGIEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVREID 62 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+ I ++NLD++QG Sbjct: 63 ALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKNVIEDEDNLDIMQGM 122 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + + + + R VV+TTGTFLRG I +G +K +G PS +L Sbjct: 123 VDELIIEDDEVKGVRTNIGTEYRSKAVVITTGTFLRGEIILGNMKYSSGPNHQLPSVTLA 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 ++ F+ R KTGTP R++ KTI + KTE Q D+ FS+ T + Q+ C +T Sbjct: 183 DNLRGLGFEVVRFKTGTPPRVNSKTIDYSKTEIQPGDDVGRAFSYETTEYILDQLPCWLT 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG NT+ Sbjct: 243 YTNDKTHQVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRNTN 302 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETK I L Sbjct: 303 EVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKMIKNL 362 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGT+GYEEAA QG++AGIN+A K + SR+D+YIGV+IDDL +KG EP Sbjct: 363 YTAGQINGTSGYEEAAGQGIMAGINAAGKVLGKEEKILSRSDAYIGVLIDDLVTKGTNEP 422 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G +LG I + R +F Q+ L + + Sbjct: 423 YRLLTSRAEYRLLLRHDNADLRLTDLGHELGLISDERYAQFNHKRQQIKDEIQRLTDIRI 482 Query: 484 TSKNLSSTSISFKQDGKTRT---AYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + + + I K + A + L P+ + + I + + S V E+++I++ Sbjct: 483 KPNDHTQSVIEANGGSKLKDGILAIDLLRRPEMTYDTILEILEEDHQLPSEVEEQVEIQT 542 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y + + + +++K E++ IP+D DYS + +L++E +EKL+ +KP N+ QAS+I G Sbjct: 543 KYEGYINKSLQKVEKVKRMEQKKIPEDLDYSKVDSLASEAREKLAEVKPLNIAQASRISG 602 Query: 601 MTPAALNLLLIYIKKNTVK 619 + PA +++LL+Y+++ ++ Sbjct: 603 VNPADISILLVYLEQGKLQ 621 >gi|94676767|ref|YP_588617.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|166222910|sp|Q1LTU7|MNMG_BAUCH RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|94219917|gb|ABF14076.1| glucose inhibited division protein A [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 631 Score = 536 bits (1380), Expect = e-150, Method: Compositional matrix adjust. Identities = 291/617 (47%), Positives = 394/617 (63%), Gaps = 21/617 (3%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 N +DVI+IGGGHAG EAA +AK+G +T L+TH TIG MSCNPAIGG+GKGHL +E+ Sbjct: 4 NYFFDVIIIGGGHAGTEAAVASAKIGCNTLLLTHNIKTIGEMSCNPAIGGIGKGHLAKEV 63 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DA+ G+M + DAAGIQFR+LN KGPAVR R QADR LYR A+ + + NL V+Q Sbjct: 64 DAMGGIMAKAIDAAGIQFRILNASKGPAVRATRAQADRYLYRKAVYNMLKNTNNLLVLQQ 123 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 V + N + ++ + ++V+LT GTFL G IHIG P GR GD S SL Sbjct: 124 FVENLIIKNNNVIGVISKAKDKFYANSVILTVGTFLDGKIHIGLNSYPGGRTGDLSSISL 183 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN--RQIEC 240 ++ K F RLKTGTP R+ T+ ++ KQ +D L FSF T ++ RQI C Sbjct: 184 SSNLRKLPFRVKRLKTGTPPRIHASTVNFNILTKQESDNPLPVFSF-TGSVSEHPRQIPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN TH II N+ +S IY+ +I+ GPRYCPSIEDKI+ F R+ HQIFLEPEGL Sbjct: 243 YITYTNKNTHDIIYNNLHYSPIYTKNIEGIGPRYCPSIEDKIIHFAHRDSHQIFLEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 ++++YPNGIST+LP +IQ + +++I GLEK +II+PGYAIEYD+ +P++L TLE+K I Sbjct: 303 MSNIIYPNGISTSLPVDIQLKIVQSIEGLEKASIIQPGYAIEYDFFDPRDLKNTLESKII 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 +GLF AGQINGTTGYEEAAAQGL+AGIN+A+K + D +R+ +YIGV+IDDL +G+ Sbjct: 363 NGLFFAGQINGTTGYEEAAAQGLIAGINAAKKVLEQDSWYPNRSQAYIGVLIDDLCLQGI 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+SLR DNAD RLT I KLG + E +F + R L++ Sbjct: 423 EEPYRMFTSRAEYRLSLREDNADLRLTEIARKLGLVNENHWHKFCIKLDYIERERQRLRN 482 Query: 481 LVLTS--------KNLSSTSISFKQDGKTRTAYEFLSYPDF---SIQNLFSICPDARKFS 529 L + L I K +G+ E L P+ ++ NL P + Sbjct: 483 LWVQPNTIGIQDLNQLLKKPIMCKINGE-----ELLRRPEINYKTLTNLSFFQPTLKNIQ 537 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 + E+++I+ Y Y +Q + E+ L+PK+ D+S + LSNE +L+ +P Sbjct: 538 AA--EQIEIQIKYEGYIAQQQEQILRQLNYEQTLLPKNMDFSLVTGLSNEAISQLNNHQP 595 Query: 590 FNLLQASKIEGMTPAAL 606 +++ QA +I G+TP A+ Sbjct: 596 YSIGQALRISGITPIAI 612 >gi|194016647|ref|ZP_03055261.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus pumilus ATCC 7061] gi|194012120|gb|EDW21688.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus pumilus ATCC 7061] Length = 628 Score = 536 bits (1380), Expect = e-150, Method: Compositional matrix adjust. Identities = 276/619 (44%), Positives = 396/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAG EAA +A+ GA T ++T + M CNP++GG KG +VREIDA Sbjct: 7 NYDVIVVGAGHAGVEAALASARQGAKTLVLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M R D IQ R+LN KGPAVR R QAD+ Y+ M++ + ++ NL ++QG V Sbjct: 67 LGGEMARNIDKTHIQMRMLNTGKGPAVRALRAQADKFQYQHEMKKTMENEPNLTMLQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + +V Q + R +VVLTTGTFL+G I +G L +G PS L + Sbjct: 127 DHLIVEDDECKGVVTQTGANYRAKSVVLTTGTFLKGRIILGDLSYSSGPNNQQPSIKLSD 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ +I + KTE Q D+ FS+ T + Q+ C +T Sbjct: 187 HLAELGFDLVRFKTGTPPRVNSHSIDYSKTEIQPGDDVPRAFSYETVEYITDQLPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+LETH+II EN+ S +YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSLETHQIIDENLHRSPMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q + + TIPGLE V ++R GYAIEYD I P +L+PTLETKKISGL+ Sbjct: 307 VYVQGLSTSLPEDVQQRMLSTIPGLENVQMMRAGYAIEYDAIVPTQLWPTLETKKISGLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QG++AGIN+ RK+ + + SR+D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGIMAGINAGRKALGKEEVILSRSDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR-----QKRFAKYIQEYNFLRSLLK 479 R+ TSRAEYR+ LR DNAD RLT +G +G I + R QK+ A ++ ++K Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTELGYHIGLISQERFQAYQQKKEAIEAEKKRLYSVIIK 486 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 T + + S S +DG A + + P+ + +++ ++ P + S V E+++I+ Sbjct: 487 PTAETQEFIRSLGGSELKDGI--RASDLMKRPEMNYESVVTLAPAETQLPSDVCEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + +++K E + IP DY ++ ++ E K+KL ++P ++ QAS+I Sbjct: 545 IKYEGYIEKSLQQVEKLKKMENKKIPDRIDYDAIKGIATEAKQKLKEVRPLSVAQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+Y+++ + Sbjct: 605 GVNPADISILLVYLEQGRI 623 >gi|149194011|ref|ZP_01871109.1| Glucose-inhibited division protein A subfamily [Caminibacter mediatlanticus TB-2] gi|149135964|gb|EDM24442.1| Glucose-inhibited division protein A subfamily [Caminibacter mediatlanticus TB-2] Length = 623 Score = 536 bits (1380), Expect = e-150, Method: Compositional matrix adjust. Identities = 287/615 (46%), Positives = 383/615 (62%), Gaps = 5/615 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DVIV+GGGHAG EAA AA++G +T L+T IG+ SCNPAIGGL KGHLV+EID Sbjct: 2 KEFDVIVVGGGHAGIEAANAAARMGKNTLLLTMLVEQIGAASCNPAIGGLAKGHLVKEID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL GLMG D AGIQFRVLN +GPAVRG R Q D + YR+ M+ IL+ NL V Q Sbjct: 62 ALGGLMGLATDNAGIQFRVLNENRGPAVRGSRAQIDMDRYRIWMRNAILNTPNLTVAQEI 121 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + + + + RC ++LTTGTF+RG++H G +KI GR + P+ + Sbjct: 122 VDEILVKNGKVYGVKTNLLNEYRCKALILTTGTFMRGLMHFGPVKIEGGRFHELPAKKIS 181 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--NRQIECG 241 S F RLKTGT AR+D +TI + K E Q DE PFSF TDK T +Q+ C Sbjct: 182 KSLENLGFKLERLKTGTTARIDARTIDFSKMEIQPGDENPKPFSFRTDKKTFNPKQLPCF 241 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT TN TH II N + +++G I+ GPRYCPSIEDK+ +F ++ H +F+EP+ L Sbjct: 242 ITYTNETTHDIIKGNFHRAPLFTGQIEGIGPRYCPSIEDKLNKFPDKERHHVFVEPQTLE 301 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 Y NG+ST+LP ++Q FI TIPGLE I+R GYAIEYD+I P L +LET+ I Sbjct: 302 ATEYYLNGLSTSLPMDVQEDFIHTIPGLENAKIVRFGYAIEYDFIQPTNLKHSLETRAIE 361 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQINGTTGYEEAAAQG++AGIN+A K ++ + + R ++YIGV+IDDL +KG Sbjct: 362 GLFFAGQINGTTGYEEAAAQGIMAGINAALKIDEKEPLILRRDEAYIGVLIDDLVTKGTN 421 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSR+EYR+ LR DNA RL G KLG + E KR K +E N ++ Sbjct: 422 EPYRMFTSRSEYRLLLREDNAILRLGDYGYKLGLLDEETYKRIEKLKEEINRGMKIVNET 481 Query: 482 VLTSKNLSSTSISFKQDGKTRTAYE---FLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 +T + + + K + E + F+ LF + P+ + FS IE++ I Sbjct: 482 FVTPNKEINVLLESLGEEKIQNKMEIRKIIGRHTFNKDKLFKLLPELKSFSDEAIEQILI 541 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 ES Y Y +Q ++K IP+DF+Y +P LS E+ EKL +P L QAS+I Sbjct: 542 ESRYHHYIEKQKQHIDKMKEMLSVKIPEDFEYKGIPGLSREIVEKLEKYRPATLFQASEI 601 Query: 599 EGMTPAALNLLLIYI 613 G+TPAA++++ +YI Sbjct: 602 SGVTPAAIDIIHMYI 616 >gi|87311176|ref|ZP_01093299.1| glucose inhibited division protein A (GIDA) [Blastopirellula marina DSM 3645] gi|87286084|gb|EAQ77995.1| glucose inhibited division protein A (GIDA) [Blastopirellula marina DSM 3645] Length = 610 Score = 536 bits (1380), Expect = e-150, Method: Compositional matrix adjust. Identities = 286/614 (46%), Positives = 388/614 (63%), Gaps = 22/614 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV++IG GHAG EAA AA+LGA TAL+T T+ MSCNPAIGG+ KG +VRE+DAL Sbjct: 8 YDVLIIGAGHAGTEAALAAARLGAKTALLTTNLDTVAQMSCNPAIGGVAKGQIVREVDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+MGR D GIQFR+LN +KGPA+ GPR QAD++ Y+ ++ + Q NL + Q VA Sbjct: 68 GGVMGRAIDETGIQFRLLNRRKGPAMHGPRAQADKKAYQNLVKLMVEDQPNLSLRQEIVA 127 Query: 126 GFNTEK----NIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 TEK ++ +++ + R VVLTTGTFL ++H G+ K P GR G+ S+ Sbjct: 128 DLLTEKVDGRQQVTGVLVHGGVIYRAPRVVLTTGTFLSAIMHTGEAKTPGGRGGEGTSSG 187 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 + + + F R KTGTPARL+ TI + E+Q D++ PFS++TD +T Q+ C Sbjct: 188 ISQALKRLQFRVERFKTGTPARLNANTIDYAAVEEQPGDDQPQPFSYLTDGLTLEQVPCH 247 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT TN H +I N+ + +YSG I+ GPRYCPSIEDK+VRF ++ HQ+FLEPEG Sbjct: 248 ITHTNEAVHELIRANLHRAPMYSGQIQGSGPRYCPSIEDKVVRFSDKTQHQLFLEPEGRR 307 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T VY NGIST+LP ++Q ++ IPGLEK I+R GYA+EYDY +P +L PTLETK + Sbjct: 308 TREVYVNGISTSLPRDVQDGMLKLIPGLEKAEIMRYGYAVEYDYCSPDQLRPTLETKDVD 367 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GL+ AGQINGTTGYEEAAAQGL+AG N+A + + SR +YIGV+IDDL + GV Sbjct: 368 GLYFAGQINGTTGYEEAAAQGLIAGANAALAAANKPPLILSRDQAYIGVLIDDLVTCGVD 427 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAE+R+ LR DNAD RLTPI G I R R + R L Sbjct: 428 EPYRMFTSRAEFRLMLRQDNADRRLTPIAHACGMIDSDRWNRLEQKETAITAARKL---- 483 Query: 482 VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 LT+ + S+ ++L P+ + + + + P +FS+ V E++ + Sbjct: 484 -LTTGRIEGASLE-----------KYLKRPEATWEMMVAADPQLAQFSAAVAEQVTYDIK 531 Query: 542 YAAYTGRQMIE-AKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 YA Y RQ E A++ + +KR IP FDY+ L + E +EKL+ +P L QA +I G Sbjct: 532 YAGYVVRQQTEVARQKRLADKR-IPDSFDYTGLSQMRAEAREKLAKHRPGTLAQAERISG 590 Query: 601 MTPAALNLLLIYIK 614 +TPA + LLL+Y++ Sbjct: 591 ITPADIALLLVYLE 604 >gi|161594059|ref|NP_900331.2| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Chromobacterium violaceum ATCC 12472] gi|205831545|sp|Q7P0A6|MNMG_CHRVO RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A Length = 632 Score = 536 bits (1380), Expect = e-150, Method: Compositional matrix adjust. Identities = 282/620 (45%), Positives = 392/620 (63%), Gaps = 10/620 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 S+DVIV+GGGHAG EAA AA++G +T L+TH T+G MSCNP+IGG+GKGHLV+E+DA Sbjct: 6 SFDVIVVGGGHAGTEAALAAARMGCATLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D GIQFR LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 66 LGGAMALATDIGGIQFRTLNASKGPAVRATRAQADRILYKAAIREMLENQPNLTLFQQPV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + + R TVVLT GTFL G IH+G GR GD +++L Sbjct: 126 DDLLIEGDRVVGAITAIGITFRAKTVVLTAGTFLSGKIHVGLENYTGGRAGDQAASTLGE 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 + + GRLKTGTP R+DG+++ + E+Q D FS+ + + +Q+ C IT Sbjct: 186 RLRELNLPVGRLKTGTPPRIDGRSVDFSVMEEQPGDTPEPVFSYRGKRAMHPKQLPCWIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II S +++G I+ GPRYCPSIEDKI RF +++ HQ+FLEPEGL T Sbjct: 246 HTNERTHDIIRSGFDRSPMFTGVIEGVGPRYCPSIEDKINRFADKDSHQVFLEPEGLTTH 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP +IQ +R+I G+E +I+RPGYAIEYDY +P+ L +LETK I GL Sbjct: 306 EFYPNGISTSLPFDIQLAAVRSIRGMENAHILRPGYAIEYDYFDPRGLKASLETKAIQGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+ + + + C R ++Y+GV++DDL +KGV EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGLNAGLFAREQEAWCPRRDEAYLGVLVDDLITKGVSEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R+ LR DNAD RLT +G KLG +G+ + F + ++ L++ L Sbjct: 426 YRMFTSRAEFRLQLREDNADLRLTEMGRKLGVVGDEQWDAFCRKRDAVEAEKARLQATWL 485 Query: 484 TSKNLSSTSISFKQDGKT----RTAYEFLSYPDFSIQNLFSI---CPDARKFSSLVIERL 536 L+ + + GK T + L P+ + L ++ A + + V E++ Sbjct: 486 HPSKLADPAALARVLGKPIEREYTLQDLLKRPNVPYRELMTVPEAADGAPELADEVAEQV 545 Query: 537 QIESSYAAYTGRQMIE-AKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 +I+ Y Y RQ E A+ E+ RL P D DY + LS E+++KL+ +P L QA Sbjct: 546 EIQVKYQGYINRQNEELARRDNLEDIRL-PGDIDYGLVKGLSKEVQQKLNQQRPETLGQA 604 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I+G+TPAA+ LL++++++ Sbjct: 605 SRIQGITPAAVALLMVHLRR 624 >gi|327438168|dbj|BAK14533.1| NAD/FAD-utilizing enzyme apparently [Solibacillus silvestris StLB046] Length = 631 Score = 536 bits (1380), Expect = e-150, Method: Compositional matrix adjust. Identities = 283/619 (45%), Positives = 395/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+G GHAG E+A AAK+GA T ++T I M CNP++GG KG +VREIDA Sbjct: 9 NFDVIVVGAGHAGVESAYAAAKMGAKTLMLTINLDMIAFMPCNPSVGGPAKGIVVREIDA 68 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLMGR+ D IQ R+LN KGPAVR R QAD+ Y+ M+R + +ENL + Q V Sbjct: 69 LGGLMGRIIDKTHIQMRMLNTGKGPAVRALRAQADKFQYQHEMKRVLEEEENLQIHQAMV 128 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ Q ++ R V++TTGTFLRG I +G LK +G PS L + Sbjct: 129 DELIVEDGEVKGVITQVGAIYRAPAVIITTGTFLRGEIILGNLKYSSGPNNQQPSIKLAD 188 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + + FD R KTGTP R++ +TI + KTE Q D+ FSF T + Q+ C +T Sbjct: 189 NLKELGFDLIRFKTGTPPRVNNRTIDYSKTEIQPGDDVPRAFSFETTEYIMDQLPCWLTY 248 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETHR I EN+ S ++SG IK GPRYCPSIEDK+ RF ++ HQIFLEPEG NT Sbjct: 249 TTEETHRTIEENLHLSPMFSGMIKGTGPRYCPSIEDKVTRFNDKPRHQIFLEPEGRNTRE 308 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE +Q + I +IPGLE ++R GYAIEYD + P +L+PTLETKKI GL+ Sbjct: 309 VYVQGLSTSLPEHVQKKLIASIPGLENAEMMRAGYAIEYDSVIPTQLWPTLETKKIQGLY 368 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AG+N+A K + I R+D+YIGV+IDDL +KG EPY Sbjct: 369 TAGQINGTSGYEEAAGQGLMAGMNAAAKVLGREEIILDRSDAYIGVLIDDLVTKGTNEPY 428 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF----AKYIQEYNFLRS-LLK 479 R+ TSRAEYR+ LR DNAD RLT IG K G I E R +F A+ QE LR ++K Sbjct: 429 RLLTSRAEYRLLLRHDNADLRLTEIGYKAGMITEERYVKFQHKKAQIEQEIARLREIIIK 488 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 T + + + + +DG R A + L + + + S+ P + S V E+++I+ Sbjct: 489 PNATTQEVIRNAGGAELKDG-IRGA-DLLKRTEMTYDLVASLTPSEIELSDDVKEQIEIQ 546 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + +++K E + IP++ DY ++P+L+ E + KL ++P ++ QAS+I Sbjct: 547 LKYEGYIQKALQQVEKMKKLEDKKIPENIDYDAIPSLATEARMKLKSVQPLSIAQASRIS 606 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 607 GVNPADVSILLVYIEQGKI 625 >gi|262376199|ref|ZP_06069429.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Acinetobacter lwoffii SH145] gi|262308800|gb|EEY89933.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Acinetobacter lwoffii SH145] Length = 626 Score = 536 bits (1380), Expect = e-150, Method: Compositional matrix adjust. Identities = 289/617 (46%), Positives = 386/617 (62%), Gaps = 6/617 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GK HLVREID Sbjct: 5 KVYDVIVIGGGHAGTEAALAAARMGRQTLLLTHNIETLGQMSCNPAIGGIGKSHLVREID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M AD GIQFR+LN +KG AVR R QADR Y+ A++ + +Q NLD+ Q Sbjct: 65 ALGGAMALAADKGGIQFRILNSRKGAAVRATRAQADRVRYKAAIRETLENQANLDIFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 E + + +V Q TVVLT GTFL GVIH+G K GR GD PS SL Sbjct: 125 ADDLIVEGDTVKGVVTQMGIRFDAKTVVLTAGTFLGGVIHVGLEKSSGGRAGDPPSISLA 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + + + GRLKTGTP R+D +++ + Q D SFM D + Q+ C I Sbjct: 185 HRLRELNLPVGRLKTGTPPRIDARSVDFSVMTPQPGDFPSPTMSFMGDVSMHPEQVNCYI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF +++ HQ+FLEPEGL+T Sbjct: 245 THTNERTHEIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFADKDSHQVFLEPEGLDT 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNGIST+LP ++Q + +R+I G+E +I+RPGYAIEYDY NP+ L TLETK I+ Sbjct: 305 HELYPNGISTSLPFDVQFELVRSIRGMENAHILRPGYAIEYDYFNPQALKFTLETKAINN 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQINGTTGYEEA AQGL+AG+N+AR++ + R ++Y+GV++DDL + G E Sbjct: 365 LYFAGQINGTTGYEEAGAQGLLAGLNAARRAWDQEQWTPKRDEAYMGVLVDDLITLGTKE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT IG ++G + + R + + ++ L+ L Sbjct: 425 PYRMFTSRAEYRLMLREDNADQRLTAIGREMGLVDDARWAVYCEKMEAVEKETGRLQHLW 484 Query: 483 LTSKNLSS---TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 N ++ K +A + L P+ S + + + S V E+++I Sbjct: 485 AAPNNPMGKKFVEMTGADLSKECSAIDLLKRPNISFAQIAELT--NSEVSPFVGEQIEIA 542 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 YA Y RQ + ++K E+ IP DFDY + LS E+ KL ++P L QAS+I Sbjct: 543 VKYAGYINRQHEDVAQMKRLEETRIPADFDYDIVSGLSREITLKLKDVRPETLAQASRIP 602 Query: 600 GMTPAALNLLLIYIKKN 616 G+TPAA+ L++I I+KN Sbjct: 603 GVTPAAVQLVMITIRKN 619 >gi|319790632|ref|YP_004152265.1| glucose inhibited division protein A [Thermovibrio ammonificans HB-1] gi|317115134|gb|ADU97624.1| glucose inhibited division protein A [Thermovibrio ammonificans HB-1] Length = 635 Score = 535 bits (1379), Expect = e-150, Method: Compositional matrix adjust. Identities = 300/629 (47%), Positives = 391/629 (62%), Gaps = 19/629 (3%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M + +DVIV+G GHAGCEAA AA++G TAL T I MSCNPAIGG+ KG +VR Sbjct: 1 MWDEVFDVIVVGAGHAGCEAALAAARMGCKTALFTINVDRIAEMSCNPAIGGVAKGTVVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G M + D GIQFR+LN KKGPAVR PR QAD+E YR M+R I + L VI Sbjct: 61 EIDALGGEMAKNIDETGIQFRILNKKKGPAVRAPRAQADKEAYRNRMRRVIENTPGLQVI 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + +V + VV+T GTFLRG I IG + GRM + P+N Sbjct: 121 QQTVDDIVVENGTVKGVVTHIGARYGAKAVVVTAGTFLRGKIFIGFNEFEGGRMWEPPAN 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 L + K F RLKTGTP R+DG+TI + K E+Q DE FS+ T+ QI C Sbjct: 181 KLSLFYEKHGFRVARLKTGTPTRIDGRTIDFSKMERQDGDEPPPFFSYWTEPREAEQIPC 240 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIK---SYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 +T T ETHRII EN+ S +Y G+ K G RYCPSIEDKIV+F ++ H +F+EP Sbjct: 241 WLTYTTPETHRIIRENLHRSPMY-GECKLISGVGVRYCPSIEDKIVKFPDKERHHVFVEP 299 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EG NT YPNG ST+LP ++Q IR+IPGLE IIRP YAIEYD+I+P+ L+PTLET Sbjct: 300 EGRNTVEFYPNGTSTSLPYDVQVAIIRSIPGLENAEIIRPAYAIEYDFIDPRHLYPTLET 359 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKS-NKLDCICFSRTDSYIGVMIDDLT 416 K I GLF AGQINGTTGYEEAA QG+VAGIN+A + K + R ++YIGVMIDDL Sbjct: 360 KLIKGLFNAGQINGTTGYEEAAGQGIVAGINAALYALGKEERFILGRDEAYIGVMIDDLV 419 Query: 417 SKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRS 476 +KGV EPYR+FTSRAEYR+ LR DNAD RL G K G + + +R + + Sbjct: 420 NKGVREPYRLFTSRAEYRLLLRYDNADYRLAKYGYKFGLLTREQYERVKRKYETVKVFIE 479 Query: 477 LLKSLVLTSKNL-----SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICP-----DAR 526 LK + L + + S S K+ +++AYE L P+ ++ + + P + Sbjct: 480 KLKEVKLRPEQVNPILESEGSTPIKE---SKSAYELLKRPEVKLEEILKLIPFELNVEDE 536 Query: 527 KFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSI 586 K ++E ++IE Y Y RQ+ E K+ + E IP+DFDY +P +S E ++KL Sbjct: 537 KLLREILEEVEIEVKYEGYIKRQLEEIKKFRKLENIKIPEDFDYDIVP-ISVEERQKLKE 595 Query: 587 LKPFNLLQASKIEGMTPAALNLLLIYIKK 615 +KP L QA+++EG+ PA++ +L IYI+K Sbjct: 596 MKPVTLGQAARLEGIRPASIPVLAIYIQK 624 >gi|326390369|ref|ZP_08211928.1| glucose inhibited division protein A [Thermoanaerobacter ethanolicus JW 200] gi|325993646|gb|EGD52079.1| glucose inhibited division protein A [Thermoanaerobacter ethanolicus JW 200] Length = 633 Score = 535 bits (1379), Expect = e-150, Method: Compositional matrix adjust. Identities = 280/617 (45%), Positives = 391/617 (63%), Gaps = 10/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+V+G GHAG EAA A+LG T +I M+CNP+IGG K LVREIDAL Sbjct: 8 YDVVVVGLGHAGSEAALACARLGLKTVGFAVNLDSIALMACNPSIGGPAKAQLVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D + +Q R LN KGPAVR R Q D++LY++ M+ + QENLD+ Q E+ Sbjct: 68 GGEMAINTDKSLLQIRTLNTSKGPAVRSLRAQVDKKLYQMNMKYTLERQENLDIKQAEIV 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E N ++ +V + ++ +C ++TTGTFL+G + IG + +G G P+N L + Sbjct: 128 DILVEDNKVTGVVTKLGAIYKCKACIITTGTFLKGRVIIGDVSFNSGPSGLFPANELSET 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + F R KTGTPAR+D ++I + K E Q DE + PFS+M DKI Q+ C +T T Sbjct: 188 LKRLGFKLMRFKTGTPARVDKRSIDFSKMEIQPGDEVITPFSYMHDKIEIEQLPCWLTYT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N TH IIM NI S ++SG+I G RYCPSIEDK+V+F + HQIF+EPEGLNT + Sbjct: 248 NKRTHEIIMANIDRSPLFSGEITGVGVRYCPSIEDKVVKFPHKERHQIFIEPEGLNTYEM 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+S++LPE++Q +F+RT+PGLE V ++RP YAIEYD I+P +L TLE+KKI GL+ Sbjct: 308 YVQGMSSSLPEDVQLEFLRTVPGLENVRVMRPAYAIEYDCIDPTQLKATLESKKIEGLYF 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ+NGT+GYEEAAAQGL+AGIN+A K + R+ +YIGV+IDDL +KG EPYR Sbjct: 368 AGQVNGTSGYEEAAAQGLMAGINAAMKLLNEPPVILDRSQAYIGVLIDDLVTKGTNEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF-AKYIQEYNFLRSLLKSLVLT 484 M TSRAEYR+ LR DNAD RLT +G K+G + E R ++F K IQ ++ L +V Sbjct: 428 MLTSRAEYRLLLRQDNADFRLTELGYKIGLVTEERYQKFLKKKIQLEKEMQRLPGVMVRP 487 Query: 485 SKNLSSTSISFKQDGKTRTA-----YEFLSYPDFSIQNLFSICPD-ARKFSSLVIERLQI 538 S+ +++ IS G T Y L P+ ++ + D V E++ I Sbjct: 488 SEEVNNFLIS---KGSTPLVTGIDLYTLLKRPEIDYKSTKFLDKDRPHDILDSVAEQIDI 544 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 Y Y +Q+ + + K E + IP+D DY + LSNE KEKL+ ++P ++ QAS+I Sbjct: 545 NIKYEGYIIKQLRQVEHFKALENKKIPEDIDYYQIHGLSNEAKEKLTKIRPTSIGQASRI 604 Query: 599 EGMTPAALNLLLIYIKK 615 G++PA +++LLIY+++ Sbjct: 605 SGVSPADISVLLIYMQQ 621 >gi|58579850|ref|YP_198866.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Xanthomonas oryzae pv. oryzae KACC10331] gi|84621864|ref|YP_449236.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|75437186|sp|Q5H6D9|MNMG_XANOR RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|123523557|sp|Q2P915|MNMG_XANOM RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|58424444|gb|AAW73481.1| glucose inhibited division protein A [Xanthomonas oryzae pv. oryzae KACC10331] gi|84365804|dbj|BAE66962.1| glucose inhibited division protein A [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 634 Score = 535 bits (1379), Expect = e-150, Method: Compositional matrix adjust. Identities = 283/625 (45%), Positives = 387/625 (61%), Gaps = 20/625 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAG EAA +A+ GA T L+TH T+G+MSCNPAIGG+GKGHLV+EIDAL Sbjct: 8 YDVIVIGGGHAGTEAALASARAGAHTLLLTHTIETVGAMSCNPAIGGIGKGHLVKEIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M AD AGIQ+R LN KGPAVR R QADR LYR A++ + +Q L V Q V Sbjct: 68 GGAMAHAADLAGIQWRTLNASKGPAVRATRCQADRNLYRTAIRCIVQAQPKLTVFQAAVD 127 Query: 126 GF-----NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 E + + ++ Q +VVLT GTFL G IH+G + AGR+GD P+ Sbjct: 128 DLIIHNGTCEADSVRGVITQTGLRFEAPSVVLTAGTFLAGKIHVGDTQYAAGRLGDPPAT 187 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + F RLKTGTP R+DG+T+ + +Q D+ L SFM + RQ+ Sbjct: 188 TLAARLRERPFAIDRLKTGTPPRIDGRTLDYGVMGEQPGDDPLPVMSFMGQVSDHPRQVS 247 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT+T +TH II + S +YSG I+ GPRYCPSIEDK+VRF E+ HQIF+EPEG Sbjct: 248 CWITQTTEQTHDIIRNALHRSPLYSGQIEGIGPRYCPSIEDKVVRFAEKTSHQIFVEPEG 307 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L+ +YPNGIST+LP ++Q +R+I G + +I RPGYAIEYD+ +P+ L +LETK Sbjct: 308 LDVAEIYPNGISTSLPFDVQLALVRSIHGFAQAHITRPGYAIEYDFFDPRGLKASLETKA 367 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 + GLF AGQINGTTGYEEAAAQGL+AG+N+AR + L R ++Y+GV++DDL + G Sbjct: 368 VGGLFFAGQINGTTGYEEAAAQGLLAGLNAARHVHGLPAWSPRRDEAYLGVLVDDLITHG 427 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT G ++G + + R RF+ + + L Sbjct: 428 TTEPYRMFTSRAEYRLQLREDNADARLTGAGREMGLVDDARWARFSAKQEAVQRETARLS 487 Query: 480 SLVLTSKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLFSI------CPDARKFSS 530 +L T N ++ + + + P+ + L + DA+ Sbjct: 488 ALWATPGNALGREVADALGVTVSRETNVLDLIKRPELNYATLMRVPTLGPGVDDAQ---- 543 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 V E+++I Y Y RQ + + E IP+ FDY+ + LS E+++KL ++P Sbjct: 544 -VAEQVEISVKYTGYLDRQRDDIARQQRHETTPIPEGFDYAGVRGLSIEVQQKLEHVRPQ 602 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 ++ QA +I GMTPAA++LLL+++++ Sbjct: 603 HIGQAQRIPGMTPAAISLLLVHLER 627 >gi|302342875|ref|YP_003807404.1| glucose inhibited division protein A [Desulfarculus baarsii DSM 2075] gi|301639488|gb|ADK84810.1| glucose inhibited division protein A [Desulfarculus baarsii DSM 2075] Length = 630 Score = 535 bits (1379), Expect = e-150, Method: Compositional matrix adjust. Identities = 276/616 (44%), Positives = 381/616 (61%), Gaps = 6/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIV+GGGHAGCEAA AA++G T LIT + ++SCNPA+GGL KGHLVREIDAL Sbjct: 9 FEVIVVGGGHAGCEAALAAARMGRQTLLITINLEHLAALSCNPAVGGLAKGHLVREIDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + DA GIQFR+LN KGPAV R Q D + Y M++ IL+Q L V+ + Sbjct: 69 GGEMAKNTDATGIQFRLLNQGKGPAVWSSRAQVDMDRYPRRMRKVILNQPRLWVLDAKAR 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 G + + ++ + VVLTTGTFLRG+IH+G PAGRMGD +N+L + Sbjct: 129 GLIVQSGRVGGVITDRGQSVSARAVVLTTGTFLRGLIHVGLKNWPAGRMGDPAANALSDQ 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + GRLKTGT RLD +++ Q DE FSF++ T Q C IT T Sbjct: 189 LRALGLNLGRLKTGTCPRLDARSVDLASLPAQPGDETPRMFSFLSQGPTLEQRPCWITHT 248 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 THRII + S +Y+G I G RYCPSIEDK+VRF +R HQIFLEP+GL++ ++ Sbjct: 249 TERTHRIIRGGLHESPMYAGVITGVGARYCPSIEDKVVRFPQRESHQIFLEPQGLDSGLI 308 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YPNGI T+LP +Q + ++PG E I+RPGYAIEYDY +P++L PTLE+K GL+L Sbjct: 309 YPNGIPTSLPLAVQEAMVHSLPGCENAFIVRPGYAIEYDYADPQDLKPTLESKIAPGLYL 368 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGT+GYEEAAAQGL AGIN+A R+ +Y+ V++DDL +KG EPYR Sbjct: 369 AGQINGTSGYEEAAAQGLWAGINAALAVRGEGAFAPDRSQAYMAVLVDDLITKGTREPYR 428 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAEYR+SLR DNAD RLT +G +G + + R F+ R LL ++ + Sbjct: 429 MFTSRAEYRLSLREDNADLRLTELGRAVGLVDDERWAAFSAKQAALGQARQLLDAVRVNP 488 Query: 486 KNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSSL---VIERLQIE 539 ++S G + +A + L P + L + P ++L V E+L+IE Sbjct: 489 SRQVLEALSELDTGALSRPLSAAQVLRRPGMDLAMLARLDPALEPLTTLPPEVAEQLRIE 548 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 +SYA Y ++ + + + E ++IP + DY+ +P LS E+ EKL+ ++P N+ QA +I Sbjct: 549 ASYAGYVEQERQQVELFRAREAQVIPPELDYAQIPGLSREVVEKLARVRPANIGQAGRIS 608 Query: 600 GMTPAALNLLLIYIKK 615 G+TPAAL ++ ++ + Sbjct: 609 GVTPAALAIVSLHATR 624 >gi|330831716|ref|YP_004394668.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Aeromonas veronii B565] gi|328806852|gb|AEB52051.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Aeromonas veronii B565] Length = 636 Score = 535 bits (1379), Expect = e-150, Method: Compositional matrix adjust. Identities = 280/619 (45%), Positives = 394/619 (63%), Gaps = 5/619 (0%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 + +DVIV+GGGHAG EAA AA++G +T L+TH T+G MSCNPAIGG+GKGHLVRE+ Sbjct: 11 HEQFDVIVVGGGHAGTEAATAAARMGMNTLLLTHNIDTLGHMSCNPAIGGIGKGHLVREV 70 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G+M R D GIQFR LN KGPAVR R QADR LY+ +++ + + NL + Q Sbjct: 71 DALGGIMARAIDLGGIQFRTLNSSKGPAVRATRAQADRLLYKAVVRQMLENYPNLKIFQQ 130 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 + + ++ +V Q I TVVLT GTFL G+IHIG GR GD PS +L Sbjct: 131 ACDDLIMDGDRVAGVVTQSGIRISGKTVVLTVGTFLNGLIHIGMENYKGGRAGDPPSIAL 190 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECG 241 + RLKTGTP R+D +++ + ++Q D+ FSF+ + + RQ+ C Sbjct: 191 AQRLRELPLRIDRLKTGTPPRIDARSVDFSVMQEQHGDDPRPVFSFIGNASQHPRQVPCY 250 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN TH +I N+ S +Y+G I+ GPRYCPSIEDKI RF ++ HQIF+EPEGL Sbjct: 251 VTHTNERTHEVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKITRFADKTAHQIFVEPEGLT 310 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T +YPNGIST+LP ++Q Q +R++ G E +I RPGYAIEYD+ +P++L +E+K I Sbjct: 311 THELYPNGISTSLPFDVQVQIVRSVRGFENAHITRPGYAIEYDFFDPRDLKANMESKCIP 370 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 LF AGQINGTTGYEEAAAQGL+AG+N+A ++ D R +Y+GVM+DDL++ G Sbjct: 371 NLFFAGQINGTTGYEEAAAQGLMAGLNAALRAQDKDPWNPRRDQAYMGVMMDDLSTLGTR 430 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+ LR DNAD RLT IG +LG + + R +F +++ R ++S Sbjct: 431 EPYRMFTSRAEYRLLLREDNADIRLTAIGRELGLVDDERWSKFNAKMEQVELERQRMRST 490 Query: 482 VLTSKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQ 537 + ++ S +++ + + ++ E L P+ + L I + E+++ Sbjct: 491 WIHPQHPSLEAVNALVNTPLTREQSLEELLRRPEVTYDALMDIEGVGPSVTDPAAAEQVE 550 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ YA Y RQ E ++ E L+P D DY + LSNE+K KL+ KP + QAS+ Sbjct: 551 IQIKYAGYIERQHDEVEKQLRNENTLLPLDLDYREVNGLSNEVKAKLNDAKPQTIGQASR 610 Query: 598 IEGMTPAALNLLLIYIKKN 616 I G+TPAA+++LL+++KK+ Sbjct: 611 ISGITPAAISILLVHLKKH 629 >gi|325122733|gb|ADY82256.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Acinetobacter calcoaceticus PHEA-2] Length = 626 Score = 535 bits (1379), Expect = e-150, Method: Compositional matrix adjust. Identities = 290/619 (46%), Positives = 388/619 (62%), Gaps = 6/619 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GK HLVREID Sbjct: 5 KVYDVIVIGGGHAGTEAALAAARMGRQTLLLTHNIETLGQMSCNPAIGGIGKSHLVREID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M AD GIQFR+LN +KG AVR R QADR Y+ A++ + +Q NLD+ Q Sbjct: 65 ALGGAMALAADKGGIQFRILNSRKGAAVRATRAQADRVRYKAAIRDTLENQVNLDIFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 E + + +V Q TVVLTTGTFL GVIH+G K GR GD PS +L Sbjct: 125 ADDLIVEGDTVKGVVTQMGIRFDAKTVVLTTGTFLGGVIHVGLEKSSGGRAGDPPSIALA 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + GRLKTGTP R+D +++ + Q D SFM D + Q+ C I Sbjct: 185 QRLRELKLPVGRLKTGTPPRIDARSVDFSVMIPQPGDFPSPVMSFMGDASMHPEQVNCYI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II + S +Y+G I+ GPRYCPSIEDKI RF +++ HQ+FLEPEGL+T Sbjct: 245 THTNEKTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFADKDSHQVFLEPEGLDT 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNGIST+LP ++Q + +R+I G+E +I+RPGYAIEYDY NP+ L TLETK I+G Sbjct: 305 HELYPNGISTSLPFDVQFELVRSIRGMENAHILRPGYAIEYDYFNPQALKFTLETKAING 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQINGTTGYEEA AQGL+AG+N+AR++ + + R +Y+GV++DDL + G E Sbjct: 365 LYFAGQINGTTGYEEAGAQGLLAGLNAARRAWEQEEWTPKRDQAYMGVLVDDLITLGTKE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT IG +LG + + R + + ++ S L+ L Sbjct: 425 PYRMFTSRAEYRLMLREDNADQRLTSIGRELGLVDDVRWAAYCEKMEAVERETSRLQHLW 484 Query: 483 LTSKNLSS---TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 N ++ K +A + L P+ + + + + S V E+++I Sbjct: 485 AAPNNPMGKKFVEMTGADLSKECSAIDLLKRPNITFGQIAELT--GSEVSEQVGEQIEIA 542 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ + ++K E+ IP DFDY + LS E+ +KL + P L QAS+I Sbjct: 543 VKYEGYINRQHEDVAQLKRLEETKIPTDFDYDVVSGLSREITQKLKTVLPETLAQASRIP 602 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+TPAA+ L++I I+KN + Sbjct: 603 GVTPAAVQLVMITIRKNNM 621 >gi|115629241|ref|XP_783517.2| PREDICTED: similar to MGC139179 protein [Strongylocentrotus purpuratus] gi|115945892|ref|XP_001186832.1| PREDICTED: similar to MGC139179 protein [Strongylocentrotus purpuratus] Length = 1272 Score = 535 bits (1378), Expect = e-150, Method: Compositional matrix adjust. Identities = 291/637 (45%), Positives = 402/637 (63%), Gaps = 31/637 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAGCEAA V+A++GA T L+THK TIG MSCNP+ GG+GKGHL+REIDAL Sbjct: 73 YDVIVVGGGHAGCEAAGVSARMGAQTLLLTHKIETIGVMSCNPSFGGIGKGHLMREIDAL 132 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDV------ 119 DG+ R+ D AGIQ++VLN +KGPAV G R Q DR+ Y+ MQ EIL+ NL V Sbjct: 133 DGISARLCDKAGIQYKVLNRRKGPAVWGLRAQIDRDQYQSYMQDEILNTPNLTVRAAPVE 192 Query: 120 ---IQGEVA----GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAG 172 IQGE A G + +K + S +V+++ IR S VV+TTGTFLRG IH+G + PAG Sbjct: 193 DLIIQGEDAAEMDGCHGDKPVCSGVVLENGETIRSSAVVITTGTFLRGEIHLGVERRPAG 252 Query: 173 RMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK 232 R+GD PS L F GRLKTGTP RLDG+TI + + D IPFSFMTD+ Sbjct: 253 RIGDEPSVGLAKRIEDAGFTLGRLKTGTPPRLDGRTIDYSELTPNHGDMPPIPFSFMTDR 312 Query: 233 IT---NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERN 289 + Q+ C +T +N E HRI ++N +H ++ + ++ GPRY I I+ R Sbjct: 313 VAIQPEDQVICHLTHSNHEVHRICIDN-QHLNVHVQE-EANGPRYETFILKAILVLPNRL 370 Query: 290 GHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPK 349 H I P+GLNTD+VY G S LP ++Q + + +I GLE + +PGY +EYDY++P+ Sbjct: 371 -HGIPDRPKGLNTDIVYMQGFSVTLPPDLQEKCVNSIKGLENATMTKPGYGVEYDYVDPR 429 Query: 350 ELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIG 409 E+ P+LET KI LF AGQINGTTGYEEAAAQG++AGIN+ K+ + SRT+ YIG Sbjct: 430 EIKPSLETLKIPRLFFAGQINGTTGYEEAAAQGIIAGINAVLKARRRPPFTISRTEGYIG 489 Query: 410 VMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQ 469 V+IDDLT++G EPYRMFTSR E+R++LRPDNAD RLT G GC+ + R + + + Sbjct: 490 VLIDDLTTRGTSEPYRMFTSRTEFRMTLRPDNADLRLTHRGFAAGCVSQERFEHTMETRK 549 Query: 470 EYNFLRSLLKSLVLTSKNLS--------STSISFKQDGKTRTAYEFLSYPDFSIQNLFSI 521 +SLL+S+ L + ++ + + +A + L +P ++ +L + Sbjct: 550 ALEESKSLLRSVKLHRQEWRRHLENHGVQSAFGNSKSPEKMSAMDILQFPGLTVHHLAAA 609 Query: 522 CPD---ARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSN 578 P AR + ERL+IE YA +Q E++ +E+ +P+D DY+SL LS Sbjct: 610 LPSESLARLEDHRLAERLKIEGIYAPLIPQQEAAIAEVQADEELELPEDLDYTSL-KLST 668 Query: 579 ELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 E KL+ +P + AS++EG+TPAA+ LL ++K+ Sbjct: 669 EAIYKLTQARPTTIGAASRLEGVTPAAVLRLLYHVKR 705 >gi|323527852|ref|YP_004230005.1| glucose inhibited division protein A [Burkholderia sp. CCGE1001] gi|323384854|gb|ADX56945.1| glucose inhibited division protein A [Burkholderia sp. CCGE1001] Length = 652 Score = 535 bits (1378), Expect = e-150, Method: Compositional matrix adjust. Identities = 287/626 (45%), Positives = 389/626 (62%), Gaps = 15/626 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALAAARMGNKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 67 GGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRLLYKQAIRHRLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 127 DLMVEGDRVVGAVTQVGIRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQIECGIT 243 + GRLKTGTP R+DG+TI + + E+Q D +P FSF+ + RQ+ C +T Sbjct: 187 LKELKLPQGRLKTGTPPRIDGRTIDFSQLEEQPGDLDPVPVFSFLGRAEQHPRQMPCWVT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPEGL T+ Sbjct: 247 HTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPEGLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP ++Q + +R++ GLE +I+RPGYAIEYDY +P+ L +LETK ISGL Sbjct: 307 EFYPNGISTSLPFDVQLELVRSMRGLEHAHILRPGYAIEYDYFDPRGLKASLETKVISGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ + + C R +Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGINAGLFVQEKEAWCPRRDQAYLGVLVDDLVTRGVSEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLT IG +LG +G+ R F++ + L++ + Sbjct: 427 YRMFTSRAEYRLSLREDNADMRLTEIGRELGVVGDVRWDAFSRKRDAVSRETERLRTTWV 486 Query: 484 TSKNLS---STSISFKQDGKTRTAYEFLSYPDFSIQNLFS----------ICPDARKFSS 530 K LS +T++ K + + L P S + + I + + Sbjct: 487 NPKTLSAEEATALLGKPIDHEYSLADLLRRPGVSYDGVCALRGGACGAPEILAEDEVLLA 546 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 + E+++I Y Y RQ E + + E +P DY+ + LS E ++KL+ +P Sbjct: 547 QIKEQIEIGIKYQGYIDRQAGEIERNEAHESTRLPDGLDYAEVRGLSFEARQKLTQYRPE 606 Query: 591 NLLQASKIEGMTPAALNLLLIYIKKN 616 + QAS+I G+TPAA++LL++++K+ Sbjct: 607 TIGQASRISGITPAAISLLMVHLKRG 632 >gi|188574491|ref|YP_001911420.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Xanthomonas oryzae pv. oryzae PXO99A] gi|188518943|gb|ACD56888.1| glucose-inhibited division protein A [Xanthomonas oryzae pv. oryzae PXO99A] Length = 634 Score = 535 bits (1378), Expect = e-150, Method: Compositional matrix adjust. Identities = 283/625 (45%), Positives = 387/625 (61%), Gaps = 20/625 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAG EAA +A+ GA T L+TH T+G+MSCNPAIGG+GKGHLV+EIDAL Sbjct: 8 YDVIVIGGGHAGTEAALASARAGARTLLLTHTIETVGAMSCNPAIGGIGKGHLVKEIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M AD AGIQ+R LN KGPAVR R QADR LYR A++ + +Q L V Q V Sbjct: 68 GGAMAHAADLAGIQWRTLNASKGPAVRATRCQADRNLYRTAIRCIVQAQPKLTVFQAAVD 127 Query: 126 GF-----NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 E + + ++ Q +VVLT GTFL G IH+G + AGR+GD P+ Sbjct: 128 DLIIHNGTCEADSVRGVITQTGLRFEAPSVVLTAGTFLAGKIHVGDTQYAAGRLGDPPAT 187 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + F RLKTGTP R+DG+T+ + +Q D+ L SFM + RQ+ Sbjct: 188 TLAARLRERPFAIDRLKTGTPPRIDGRTLDYGVMGEQPGDDPLPVMSFMGQVSDHPRQVS 247 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT+T +TH II + S +YSG I+ GPRYCPSIEDK+VRF E+ HQIF+EPEG Sbjct: 248 CWITQTTEQTHDIIRNALHRSPLYSGQIEGIGPRYCPSIEDKVVRFAEKTSHQIFVEPEG 307 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L+ +YPNGIST+LP ++Q +R+I G + +I RPGYAIEYD+ +P+ L +LETK Sbjct: 308 LDVAEIYPNGISTSLPFDVQLALVRSIHGFAQAHITRPGYAIEYDFFDPRGLKASLETKA 367 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 + GLF AGQINGTTGYEEAAAQGL+AG+N+AR + L R ++Y+GV++DDL + G Sbjct: 368 VGGLFFAGQINGTTGYEEAAAQGLLAGLNAARHVHGLPAWSPRRDEAYLGVLVDDLITHG 427 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT G ++G + + R RF+ + + L Sbjct: 428 TTEPYRMFTSRAEYRLQLREDNADARLTGAGREMGLVDDARWARFSAKQEAVQRETARLS 487 Query: 480 SLVLTSKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLFSI------CPDARKFSS 530 +L T N ++ + + + P+ + L + DA+ Sbjct: 488 ALWATPGNALGREVADALGVTVSRETNVLDLIKRPELNYATLMRVPTLGPGVDDAQ---- 543 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 V E+++I Y Y RQ + + E IP+ FDY+ + LS E+++KL ++P Sbjct: 544 -VAEQVEISVKYTGYLDRQRDDIARQQRHETTPIPEGFDYAGVRGLSIEVQQKLEHVRPQ 602 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 ++ QA +I GMTPAA++LLL+++++ Sbjct: 603 HIGQAQRIPGMTPAAISLLLVHLER 627 >gi|293609470|ref|ZP_06691772.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292827922|gb|EFF86285.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 626 Score = 535 bits (1378), Expect = e-150, Method: Compositional matrix adjust. Identities = 290/619 (46%), Positives = 388/619 (62%), Gaps = 6/619 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GK HLVREID Sbjct: 5 KVYDVIVIGGGHAGTEAALAAARMGRQTLLLTHNIETLGQMSCNPAIGGIGKSHLVREID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M AD GIQFR+LN +KG AVR R QADR Y+ A++ + +Q NLD+ Q Sbjct: 65 ALGGAMALAADKGGIQFRILNSRKGAAVRATRAQADRVRYKAAIRDTLENQVNLDIFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 E + + +V Q TVVLTTGTFL GVIH+G K GR GD PS +L Sbjct: 125 ADDLIVEGDTVKGVVTQMGIRFDSKTVVLTTGTFLGGVIHVGLEKSSGGRAGDPPSIALA 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + GRLKTGTP R+D +++ + Q D SFM D + Q+ C I Sbjct: 185 QRLRELKLPVGRLKTGTPPRIDARSVDFSVMIPQPGDFPSPVMSFMGDASMHPEQVNCYI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II + S +Y+G I+ GPRYCPSIEDKI RF +++ HQ+FLEPEGL+T Sbjct: 245 THTNEKTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFADKDSHQVFLEPEGLDT 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNGIST+LP ++Q + +R+I G+E +I+RPGYAIEYDY NP+ L TLETK I+G Sbjct: 305 HELYPNGISTSLPFDVQFELVRSIRGMENAHILRPGYAIEYDYFNPQALKFTLETKAING 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQINGTTGYEEA AQGL+AG+N+AR++ + + R +Y+GV++DDL + G E Sbjct: 365 LYFAGQINGTTGYEEAGAQGLLAGLNAARRAWEQEEWTPKRDQAYMGVLVDDLITLGTKE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT IG +LG + + R + + ++ S L+ L Sbjct: 425 PYRMFTSRAEYRLMLREDNADQRLTSIGRELGLVDDVRWAAYCEKMEAVERETSRLQHLW 484 Query: 483 LTSKNLSS---TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 N ++ K +A + L P+ + + + + S V E+++I Sbjct: 485 AAPNNPMGKKFVEMTGADLSKECSAIDLLKRPNITFGQIAELT--GSEVSEQVGEQIEIA 542 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ + ++K E+ IP DFDY + LS E+ +KL + P L QAS+I Sbjct: 543 VKYEGYINRQHEDVAQLKRLEETKIPADFDYDVVSGLSREITQKLKTVLPETLAQASRIP 602 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+TPAA+ L++I I+KN + Sbjct: 603 GVTPAAVQLVMITIRKNNM 621 >gi|94496562|ref|ZP_01303138.1| glucose inhibited division protein A [Sphingomonas sp. SKA58] gi|94423922|gb|EAT08947.1| glucose inhibited division protein A [Sphingomonas sp. SKA58] Length = 616 Score = 535 bits (1378), Expect = e-150, Method: Compositional matrix adjust. Identities = 293/617 (47%), Positives = 401/617 (64%), Gaps = 7/617 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +++ YDVIV+GGGHAGCEAAA AA+ GA+ AL+T ST+G+MSCNPAIGGLGKGHLVRE Sbjct: 1 MHKPYDVIVVGGGHAGCEAAAAAARKGAAVALLTFDRSTVGAMSCNPAIGGLGKGHLVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DALDGLM R ADA+ I +R+LN KG AV+GPR QADR YR A+ R I + L +I+ Sbjct: 61 VDALDGLMARAADASAIHYRMLNSSKGAAVQGPRVQADRVRYRAAIHRLIDDLDGLTIIE 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 GE + ++ + + D M+ S +VL TGTFL G + G + GR+G+ + S Sbjct: 121 GEAQELLLDAGQVTGVRLADGRMLNSSAIVLATGTFLGGKLFCGDTQDVGGRVGERAATS 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L D RLKTGTP R+DG+TI W + E Q +D+ S +T Q+ C Sbjct: 181 LGTQLRLLDLPIARLKTGTPPRIDGRTIDWARLETQPSDDDGWTMSPVTPNRILPQLACA 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 ITRTN THRII E + S ++SG I+ GPRYCPSIEDK++RFG+R+GHQIFLEPEGL+ Sbjct: 241 ITRTNDRTHRIIREGLGRSPLFSGAIEGRGPRYCPSIEDKVLRFGDRDGHQIFLEPEGLD 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 + +VYPNGIST+LP +IQ IR++ GLE I+ GYA+EYD+++P+ L LE + +S Sbjct: 301 SPLVYPNGISTSLPADIQRDMIRSMVGLECAEIVVAGYAVEYDHVDPRALTSALELRAVS 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQINGTTGYEEAAAQGLVAG N+A + + R SYIGVMIDDL +GV Sbjct: 361 GLFCAGQINGTTGYEEAAAQGLVAGANAAAHALGQSPMILDRASSYIGVMIDDLVLQGVT 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRM T+RAEYR+ LR DNA+ RL +G+ G IG R +R +Q + RS +++ Sbjct: 421 EPYRMLTARAEYRLRLRADNAETRLGSLGLAHGLIGPDRARR----LQLRSDWRSRVETA 476 Query: 482 V---LTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 + +T+ ++ +QDG RT E+ +P+ + L ++ P + V L Sbjct: 477 LARSMTASEMAKAGAVVRQDGARRTLAEWARFPEVPRRLLMTLAPSLQDAPDDVRNELLE 536 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 ++ YA Y RQ E ++ +E+ +I DFD+ S+ LS+E+ E+L +P L A +I Sbjct: 537 DAHYAPYLLRQEAEVAALRRDERVIIAADFDFRSVGGLSSEMIERLEAARPDTLAAAGRI 596 Query: 599 EGMTPAALNLLLIYIKK 615 G+TPAAL +L++ ++ Sbjct: 597 RGITPAALAAILVHARR 613 >gi|319957596|ref|YP_004168859.1| glucose inhibited division protein a [Nitratifractor salsuginis DSM 16511] gi|319420000|gb|ADV47110.1| glucose inhibited division protein A [Nitratifractor salsuginis DSM 16511] Length = 624 Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust. Identities = 290/618 (46%), Positives = 389/618 (62%), Gaps = 10/618 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIVIGGGHAG EA+ AA++GA T +IT IG+ SCNPAIGGL KGHLV+EIDA Sbjct: 2 NHDVIVIGGGHAGIEASLAAARMGAKTLMITILAEQIGASSCNPAIGGLAKGHLVKEIDA 61 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG DA G+QFR+LN KGPAVRG R Q D + YR+ M+ L+ NL+V Q V Sbjct: 62 LGGEMGLCTDATGLQFRLLNSSKGPAVRGSRAQIDMDRYRIYMRDVCLNTPNLEVKQEIV 121 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + Q + V++ +GTFL G+IHIG+ AGR G+ S SL Sbjct: 122 ERLIVEDGEVKGVETQLGNRYLAPKVIIASGTFLNGLIHIGQRTQQAGRQGEFASVSLAE 181 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK--ITNRQIECGI 242 + + F+ GRLKTGT AR+ G +I + E+Q DER IPFSF TD+ Q+ C + Sbjct: 182 NLREMGFEIGRLKTGTCARIAGDSIDFSVMEEQPGDERPIPFSFRTDRENFNPEQMPCWV 241 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T T ETHRII N + ++SG I+ GPRYCPSIEDKI RF +R HQ+F+EP+ Sbjct: 242 TYTTEETHRIIESNFHRAPLFSGQIEGVGPRYCPSIEDKIDRFRDRPRHQVFVEPQTREA 301 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 D Y NG+ST+LP ++Q IR+I GLEK I+R GYAIEYD+I P EL+ TLE+KKI G Sbjct: 302 DEFYLNGLSTSLPTDVQEAMIRSISGLEKAKIVRWGYAIEYDFIQPTELYHTLESKKIRG 361 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQ+NGTTGYEEAAAQGL+AGIN+ + + R ++YIGV+IDDL +KG E Sbjct: 362 LYWAGQVNGTTGYEEAAAQGLMAGINAVLALRGEEPLILGRDEAYIGVLIDDLVTKGTNE 421 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF----AKYIQEYNFLRSLL 478 PYRMFTSRAEYR+ LR DNA RL G+KLG + E+ K+ A+ + +LRS Sbjct: 422 PYRMFTSRAEYRLLLREDNAHLRLAHYGVKLGLLPEKFGKKVAGTKAQIAEALEWLRSHY 481 Query: 479 KSLVLTSKNLSSTSISFKQDGKTRTAY-EFLS-YPDFSIQNLFSICPDARKFSSLVIERL 536 + T + ++ +Q +TA+ + L+ + S + L + P+ K+ VIE++ Sbjct: 482 AT--PTKEFIAQLEAMGEQRINDKTAWIDLLARIAEPSREKLLELLPEFAKYPDEVIEQI 539 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +E+ Y Y +Q + + IP+DFDY + LSNE+ EKL P L +AS Sbjct: 540 LVEAKYYRYIEKQQQQIDRMHEMHTVRIPEDFDYRKVQGLSNEIVEKLEKATPPTLFEAS 599 Query: 597 KIEGMTPAALNLLLIYIK 614 +I G+TPAA+ +L +YIK Sbjct: 600 RISGITPAAIEILHVYIK 617 >gi|188997499|ref|YP_001931750.1| glucose inhibited division protein A [Sulfurihydrogenibium sp. YO3AOP1] gi|259495853|sp|B2V6C3|MNMG_SULSY RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|188932566|gb|ACD67196.1| glucose inhibited division protein A [Sulfurihydrogenibium sp. YO3AOP1] Length = 620 Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust. Identities = 293/625 (46%), Positives = 389/625 (62%), Gaps = 32/625 (5%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDV+VIGGGHAG EAA +AKLG TALIT IG M CNP+IGG+ KG +VRE+DA Sbjct: 6 EYDVVVIGGGHAGIEAALASAKLGTKTALITIDKEKIGLMPCNPSIGGIAKGIVVREVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M + D GIQF+VLN +KGPAVR PR QAD+E YR M + + ENL VI+ EV Sbjct: 66 LGGEMAKAIDQTGIQFKVLNTRKGPAVRSPRAQADKEEYRKYMVNKTNNTENLTVIEDEV 125 Query: 125 AG--FNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 KN + ++ I+ VV+TTGTFL G+IHIG + PAGRM + PS L Sbjct: 126 IDIVLKENKNEVDGVITDKGLKIKTKAVVVTTGTFLNGLIHIGDKRFPAGRMEEKPSTKL 185 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI------TNR 236 + + F+ R KTGTPARLD TI + E+ D FSF T+ Sbjct: 186 PEFYKRAGFELFRFKTGTPARLDKNTINFSILEEAPGDNPPPKFSFWTEPKGSYWFKEKD 245 Query: 237 QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLE 296 QI C IT T ETHRII EN+ +A+Y G I GPRYCPS+EDKIV+F ++ H ++LE Sbjct: 246 QIPCYITYTTPETHRIIKENLHRTALYGGAITGIGPRYCPSVEDKIVKFEGKDRHTVWLE 305 Query: 297 PEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLE 356 PE + +YPNG+ST+L EEIQ Q R+IPGLE V +++P YAIEYD + P EL+PTLE Sbjct: 306 PETRDGISIYPNGLSTSLSEEIQWQMYRSIPGLENVVLLKPAYAIEYDIVMPTELYPTLE 365 Query: 357 TKKISGLFLAGQINGTTGYEEAAAQGLVAGINSA-RKSNKLDCICFSRTDSYIGVMIDDL 415 TK+I GL+ AG NGTTGYEEAA QG+VAGIN+A R K + R ++YIGVMIDDL Sbjct: 366 TKRIRGLYHAGNFNGTTGYEEAAGQGIVAGINAALRALGKDEPFIIRRDEAYIGVMIDDL 425 Query: 416 TSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLR 475 T+KGV+EPYR+FTSR+EYR+ LR DNA RL +G + E +EY F++ Sbjct: 426 TTKGVIEPYRLFTSRSEYRLHLRQDNAILRLYQKAYNIGMLNE----------EEYKFVK 475 Query: 476 SLLKSLVLTSKN-LSSTSISFKQDGKTRTA-YEFLSYPDFSIQNLFSI---CPDARKFSS 530 + + KN ++ +F +DG + + + +L P+ IQ L + P+ S Sbjct: 476 ETEEEI----KNWINIYKETFIKDGDKKVSIFTYLQKPEVDIQKLKEMGIAVPE----SD 527 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 + E ++I Y Y R+ +++K+ E IP+D DYS + L E+ +KL+ KP Sbjct: 528 YIQEEIEINVKYDGYLEREEKLNEKMKYLEGIKIPEDIDYSQVAGLRKEIVQKLTKFKPM 587 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 L QAS++EG+TPAA+ LL++I+K Sbjct: 588 TLGQASRLEGITPAAITALLVHIEK 612 >gi|46447473|ref|YP_008838.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Candidatus Protochlamydia amoebophila UWE25] gi|81170564|sp|Q6MA36|MNMG_PARUW RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|46401114|emb|CAF24563.1| putative glucose-inhibited division protein [Candidatus Protochlamydia amoebophila UWE25] Length = 625 Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust. Identities = 283/613 (46%), Positives = 390/613 (63%), Gaps = 17/613 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAGCEAA +A++G T L+T TI MSCNPA+GG+ KGH+VREIDAL Sbjct: 10 YDVIVIGGGHAGCEAALASARMGLRTLLLTMNLDTIAKMSCNPAVGGIAKGHIVREIDAL 69 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+V D GIQ+R+LN KGPAV PR QAD+ Y+ M+ + NLD+ QG + Sbjct: 70 GGEMGKVIDVTGIQYRMLNATKGPAVWAPRAQADKLAYQSEMKHRMERVSNLDIKQGTIE 129 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + I ++ ++ C +VL++GTFLRG++HIG+ GR GD PS + S Sbjct: 130 DLLIENDHICGVITKEGISYDCQAIVLSSGTFLRGLLHIGETNYSGGRAGDQPSVGMSAS 189 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 K+ GRLKTGTP R++ ++I + TE+Q D + FS+ + I Q+ C IT Sbjct: 190 LEKYGLKLGRLKTGTPPRINKRSIDFSCTEEQPGDPG-VKFSYDNEGIPRLPQVSCYITY 248 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ET +II+ NI S +YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEGL T Sbjct: 249 TTEETKQIILSNIHRSPMYSGKIKGVGPRYCPSIEDKVVRFSDKERHQIFLEPEGLQTQE 308 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY NG+S++LP ++Q FI++IP L I+RP YAIEYDY+ ++ +LE KKI GLF Sbjct: 309 VYVNGVSSSLPFDVQLAFIKSIPALRHAEIMRPAYAIEYDYVISGQIDFSLECKKIGGLF 368 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGT+GYEEAA QGL+AGIN+A K + R+++YIGVMIDDL +KG+ EPY Sbjct: 369 LAGQINGTSGYEEAAGQGLMAGINAANKVMGKAPLILKRSEAYIGVMIDDLVTKGLDEPY 428 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAE+R+ LR DNAD RL G ++G + + R Y+ ++ + + Sbjct: 429 RMFTSRAEHRLLLRQDNADLRLRRYGYEVGLVDQTR----------YDRVKEKQRIMEEE 478 Query: 485 SKNLSSTSISFKQ-DGKTRTAYEFLSYPDFSIQNLFSICPDA-RKFSSLVIERLQIESSY 542 S+ L+ T FKQ K T + L P+ + +L PD + F + ++++ Y Sbjct: 479 SERLAKT---FKQVSNKGYTLTQLLCRPENTYASLLKEYPDVMQNFGEEINFQIELNLKY 535 Query: 543 AAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMT 602 A Y RQ E ++ EK IP FD+S++ L NE K+KL+ + P +L QA +I G++ Sbjct: 536 AGYIDRQTSEVAKLAHVEKIQIPIGFDFSTVNGLRNEAKQKLNQIAPRHLGQALRISGVS 595 Query: 603 PAALNLLLIYIKK 615 PA +++L+I + + Sbjct: 596 PADISILMIALTR 608 >gi|121602981|ref|YP_980310.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Polaromonas naphthalenivorans CJ2] gi|205375705|sp|A1VIB1|MNMG_POLNA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|120591950|gb|ABM35389.1| glucose inhibited division protein A [Polaromonas naphthalenivorans CJ2] Length = 667 Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust. Identities = 291/653 (44%), Positives = 393/653 (60%), Gaps = 39/653 (5%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNP+IGG+GKGHLV+E+D Sbjct: 5 QEFDVIVVGGGHAGTEAALAAARMGCKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 A+ G M D GIQFR+LN KGPAVR R QADR LY+ A++R I +Q NL + Q Sbjct: 65 AMGGAMALATDEGGIQFRILNGSKGPAVRATRAQADRILYKAAIRRMIENQPNLWLFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + + V Q R TVVLT GTFL G IH+G PAGR GD P+ SL Sbjct: 125 VDDLMVEGDRVVGAVTQVGIKFRARTVVLTAGTFLDGKIHVGLNNYPAGRAGDPPAVSLS 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFAD------ERLIP-FSFMTDKITN- 235 + GRLKTGTP R+DG++I + K Q D +P FSFM + + Sbjct: 185 ARLKELKLPQGRLKTGTPPRIDGRSIDFSKCGVQPGDGMPGGTPGPVPVFSFMGGNVPHP 244 Query: 236 RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFL 295 +Q+ C IT TN TH II S +++G I GPRYCPS+EDKI RF ++ HQIFL Sbjct: 245 KQVPCWITHTNERTHDIIRSGFDRSPMFTGKIDGVGPRYCPSVEDKINRFAGKDSHQIFL 304 Query: 296 EPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTL 355 EPEGL T +YPNGIST+LP +IQ+ +R++ G+E +I+RPGYAIEYDY +P+ L Sbjct: 305 EPEGLTTHEIYPNGISTSLPFDIQYALVRSMAGMENAHILRPGYAIEYDYFDPRALKTNF 364 Query: 356 ETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDL 415 ET+ I GLF AGQINGTTGYEEAAAQG+ AGIN+A + + + R ++Y+GV++DDL Sbjct: 365 ETRAIGGLFFAGQINGTTGYEEAAAQGMFAGINAALQCQEKEAWLPKRDEAYLGVLVDDL 424 Query: 416 TSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLR 475 +KGV EPYRMFTSRAE+R+ LR DNAD RLT G +LG + + R F + + Sbjct: 425 ITKGVTEPYRMFTSRAEFRLMLREDNADMRLTEKGRELGLVDDARWDAFNRKRDIVSRET 484 Query: 476 SLLKSLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL- 531 L++L + NL ++ + K + + L PD + L S+ D ++++ Sbjct: 485 QRLRALWINPNNLPASEAERVLGKAIEREYNLADLLRRPDVNYAGLMSL--DGGRYANPE 542 Query: 532 -------------------------VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPK 566 VIE+++I + YA Y Q +E + E +P Sbjct: 543 IPTGNEDVSRETSTDSALPADLVKSVIEQIEITAKYAGYIDLQKVEVERASHYENLKLPA 602 Query: 567 DFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 D DY + ALS E ++ LS +P L AS+I+G+TPA ++LLL+++KKN K Sbjct: 603 DLDYLQVSALSFEARQMLSKHRPETLGLASRIQGITPATISLLLVHLKKNLWK 655 >gi|149182298|ref|ZP_01860777.1| glucose-inhibited division protein A [Bacillus sp. SG-1] gi|148849990|gb|EDL64161.1| glucose-inhibited division protein A [Bacillus sp. SG-1] Length = 629 Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust. Identities = 281/619 (45%), Positives = 393/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVIVIG GHAG EA AA++GA T ++T + M CNP++GG KG +VREIDA Sbjct: 7 QFDVIVIGAGHAGVEAGLAAARMGAKTLMVTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ M++ I + N+ ++QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFAYQHEMKKTIEDEPNMTLLQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + +V Q + R TVV+TTGTFLRG I +G L+ +G PS L Sbjct: 127 ESLIIEDDECKGVVTQTGAEYRAKTVVITTGTFLRGEIILGDLRYSSGPNNQQPSIKLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ KTI + KTE Q D+ FS+ T K Q+ C +T Sbjct: 187 HLQELGFDMVRFKTGTPPRVNSKTIDYSKTEIQPGDDVPRAFSYETTKYITDQLPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN ETH++I +N+ S +YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TNAETHQLIDDNLGRSPMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGKNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q + + TIPGLEK ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQMKILATIPGLEKAQLMRAGYAIEYDSIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A ++ + + +R+D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRALDKEEVILNRSDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF----AKYIQEYNFLRSL-LK 479 R+ TSRAEYR+ LR DNAD RLT IG K+G I + R +RF A +E L+++ LK Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTDIGHKIGLISDERYERFLTKKALVEEEKARLQTIRLK 486 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 T + S +DG A + L P+ + ++ ++ P + + E+++I+ Sbjct: 487 PNEETQNVIKEAGGSELKDGI--LASDILRRPEMNYSHIKALIPREEPLTEDIEEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + ++K E + IP DY ++ L++E ++KL ++P +L QAS+I Sbjct: 545 IKYEGYIEKSLQQVDKMKKMENKKIPDFIDYDAINGLASEARQKLKEVRPLSLAQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 605 GVNPADVSILLVYIEQGKI 623 >gi|119776787|ref|YP_929527.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shewanella amazonensis SB2B] gi|166200610|sp|A1SBV1|MNMG_SHEAM RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|119769287|gb|ABM01858.1| glucose-inhibited division protein A [Shewanella amazonensis SB2B] Length = 629 Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust. Identities = 288/615 (46%), Positives = 379/615 (61%), Gaps = 5/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDAL Sbjct: 7 FDVIVVGGGHAGTEAALAAARMGCKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D +GIQFR LN KGPAVR R QADR LY+ + + Q NL + Q V Sbjct: 67 GGAMAIATDFSGIQFRTLNSSKGPAVRATRAQADRALYKAKILNILQHQPNLRIFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + V Q VVLT GTFL G IHIG GR GD P+ +L + Sbjct: 127 DLVVENGRVIGAVTQMGLAFEAPAVVLTAGTFLGGKIHIGLENYSGGRAGDQPAIALAHR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 GRLKTGTP R+D +TI + +Q D L SF+ D + QI C IT Sbjct: 187 LRDLPLRVGRLKTGTPPRIDARTIDFSVMTEQKGDTPLPVMSFIGDLSQHPEQISCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH II + S +YSG I+ GPRYCPSIEDKI RF ++N HQIF+EPEGL T Sbjct: 247 TNEQTHDIIRGGLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKNSHQIFIEPEGLTTTE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R+I G+E+ I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 IYPNGISTSLPFDVQIQLVRSIRGMEQAEIVRPGYAIEYDYFDPRDLKNSLETKVIDGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG+N+A + + R +Y+GV++DDL++ G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGLNAALQVQGKEAWAPRRDQAYLGVLVDDLSTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R ++F++ + + L+ + Sbjct: 427 RMFTSRAEYRLLLREDNADLRLTEKGRELGLVDDFRWQKFSEKRESIELEQQRLRGQWVH 486 Query: 485 SKNLSSTSISFKQDGK-TRTAY--EFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 + ++ TR A + L P+ L + + L E++QI+ Sbjct: 487 VNSPQVAELNEVLSAPLTREASLEDLLRRPEIEYDTLMKVDGFGPGLADPLAAEQVQIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 YA Y RQ E + + E +P D DYS +P LSNE+ KL+ KP + QAS+I G Sbjct: 547 KYAGYIQRQQDEIAKAERNENTRLPLDLDYSEVPGLSNEVTAKLNAHKPETIGQASRISG 606 Query: 601 MTPAALNLLLIYIKK 615 +TPAA+++LL+++KK Sbjct: 607 VTPAAVSILLVHLKK 621 >gi|262372168|ref|ZP_06065447.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Acinetobacter junii SH205] gi|262312193|gb|EEY93278.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Acinetobacter junii SH205] Length = 626 Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust. Identities = 288/619 (46%), Positives = 387/619 (62%), Gaps = 6/619 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GK HLVREID Sbjct: 5 KVYDVIVIGGGHAGTEAALAAARMGRQTLLLTHNIETLGQMSCNPAIGGIGKSHLVREID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M AD GIQFR+LN +KG AVR R QADR Y+ A++ + +Q NL + Q Sbjct: 65 ALGGAMALAADKGGIQFRILNSRKGAAVRATRAQADRVRYKAAIRHTLENQANLVIFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 E + + +V Q TVVLTTGTFL GVIHIG GR GD PS +L Sbjct: 125 ADDLIVEGDTVKGVVTQMGIRFDTKTVVLTTGTFLGGVIHIGLQNSSGGRAGDPPSIALA 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + + GRLKTGTP R+D +T+ + Q D SFM D + Q+ C I Sbjct: 185 HRLRELKLPVGRLKTGTPPRIDARTVDFSVMTPQPGDFPSPVMSFMGDVSMHPEQVNCYI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T T+ +TH II + S +Y+G I+ GPRYCPSIEDKI RF +++ HQ+FLEPEGL+T Sbjct: 245 THTSEKTHEIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFADKDSHQVFLEPEGLDT 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNGIST+LP ++Q +R+I G+E +I+RPGYAIEYDY NP+ L TLETK I Sbjct: 305 HELYPNGISTSLPFDVQFNLVRSIRGMENAHILRPGYAIEYDYFNPQALKFTLETKAIQN 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQINGTTGYEEA AQGL+AG+N+AR++ + + R +Y+GV++DDL + G E Sbjct: 365 LYFAGQINGTTGYEEAGAQGLLAGLNAARRAWEQEEWTPKRDQAYMGVLVDDLITLGTKE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLTPIG +LG + + R +++ ++ S L+ L Sbjct: 425 PYRMFTSRAEYRLMLREDNADQRLTPIGRELGLVDDERWAAYSEKMEAVERETSRLQHLW 484 Query: 483 LTSKNLSS---TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 N ++ K +A + L P+ + + + + S V E+++I Sbjct: 485 AAPNNPMGKKFVEMTGADLSKECSAIDLLKRPNINFGQIAELT--GSEVSEQVGEQIEIA 542 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ + ++K E+ IP DF+Y + LS E+ +KL ++P L QAS+I Sbjct: 543 VKYEGYINRQHDDVAQMKRLEETKIPADFEYDGVSGLSREITQKLKTVRPETLAQASRIP 602 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+TPAA+ L++I I+KN + Sbjct: 603 GVTPAAVQLVMITIRKNNM 621 >gi|319891294|ref|YP_004148169.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus pseudintermedius HKU10-03] gi|317160990|gb|ADV04533.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus pseudintermedius HKU10-03] Length = 624 Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust. Identities = 277/619 (44%), Positives = 396/619 (63%), Gaps = 3/619 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 +S+DVIV+G GH+G EA +A+ GA T ++T I M CNP++GG KG +VREID Sbjct: 3 KSFDVIVVGAGHSGIEAGLASARRGAHTLMLTINLDNIAFMPCNPSVGGPAKGIVVREID 62 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R + ++NL+V+QG Sbjct: 63 ALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRILEDEDNLEVMQGM 122 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + + + R V+LTTGTFLRG I +G LK +G PS +L Sbjct: 123 VDELIIEDGEVKGVRTNIGTEYRAKAVILTTGTFLRGEIILGNLKYSSGPNHQLPSITLA 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + + F+ R KTGTP R++ KTI + KTE Q D+ FS+ T + Q+ C +T Sbjct: 183 DHLRELGFEVVRFKTGTPPRVNAKTIDYSKTEIQPGDDVGRAFSYDTTEYILDQLPCWLT 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN ETH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG NT+ Sbjct: 243 YTNGETHQVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRNTN 302 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPEE+Q Q + TIPGLEK +++R GYAIEYD + P +L+PTLETK I L Sbjct: 303 EVYVQGLSTSLPEEVQRQMLATIPGLEKADMMRAGYAIEYDALVPTQLWPTLETKMIKNL 362 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGT+GYEEAA QGL+AGIN+A + + R+D+YIGV+IDDL +KG EP Sbjct: 363 YTAGQINGTSGYEEAAGQGLMAGINAAARVLGKEETILRRSDAYIGVLIDDLVTKGTNEP 422 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G +LG I + R +RF Q+ + L+ + + Sbjct: 423 YRLLTSRAEYRLLLRHDNADLRLTDLGHELGLISDERYERFNTKRQQITDEMARLEQIRV 482 Query: 484 TSKNLSSTSISFKQDGKTRT---AYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 I K + + A E L P+ + + + I + R+ + V E+++I++ Sbjct: 483 KPSERVQQIIEEKGGSRLKDGILAKELLRRPEMTYETIIEILEEERQLPADVEEQVEIQT 542 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y + + + ++K E++ IP+D DYS + +L+ E +EKL+ +KP N+ QAS+I G Sbjct: 543 KYEGYITKSLQQVDKVKRMEQKKIPEDLDYSQIDSLATEAREKLAEVKPLNIAQASRISG 602 Query: 601 MTPAALNLLLIYIKKNTVK 619 + PA +++LL+Y+++ ++ Sbjct: 603 VNPADISILLVYLEQGKIQ 621 >gi|323465553|gb|ADX77706.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus pseudintermedius ED99] Length = 624 Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust. Identities = 277/619 (44%), Positives = 396/619 (63%), Gaps = 3/619 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 +S+DVIV+G GH+G EA +A+ GA T ++T I M CNP++GG KG +VREID Sbjct: 3 KSFDVIVVGAGHSGIEAGLASARRGAHTLMLTINLDNIAFMPCNPSVGGPAKGIVVREID 62 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R + ++NL+V+QG Sbjct: 63 ALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRILEGEDNLEVMQGM 122 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + + + R V+LTTGTFLRG I +G LK +G PS +L Sbjct: 123 VDELIIEDGEVKGVRTNIGTEYRAKAVILTTGTFLRGEIILGNLKYSSGPNHQLPSITLA 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + + F+ R KTGTP R++ KTI + KTE Q D+ FS+ T + Q+ C +T Sbjct: 183 DHLRELGFEVVRFKTGTPPRVNAKTIDYSKTEIQPGDDVGRAFSYDTTEYILDQLPCWLT 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN ETH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG NT+ Sbjct: 243 YTNGETHQVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRNTN 302 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPEE+Q Q + TIPGLEK +++R GYAIEYD + P +L+PTLETK I L Sbjct: 303 EVYVQGLSTSLPEEVQRQMLATIPGLEKADMMRAGYAIEYDALVPTQLWPTLETKMIKNL 362 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGT+GYEEAA QGL+AGIN+A + + R+D+YIGV+IDDL +KG EP Sbjct: 363 YTAGQINGTSGYEEAAGQGLMAGINAAARVLGKEETILRRSDAYIGVLIDDLVTKGTNEP 422 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G +LG I + R +RF Q+ + L+ + + Sbjct: 423 YRLLTSRAEYRLLLRHDNADLRLTDLGHELGLISDERYERFNTKRQQITDEMARLEQIRV 482 Query: 484 TSKNLSSTSISFKQDGKTRT---AYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 I K + + A E L P+ + + + I + R+ + V E+++I++ Sbjct: 483 KPSERVQQIIEEKGGSRLKDGILAKELLRRPEMTYETIIEILEEERQLPADVEEQVEIQT 542 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y + + + ++K E++ IP+D DYS + +L+ E +EKL+ +KP N+ QAS+I G Sbjct: 543 KYEGYITKSLQQVDKVKRMEQKKIPEDLDYSQIDSLATEAREKLAEVKPLNIAQASRISG 602 Query: 601 MTPAALNLLLIYIKKNTVK 619 + PA +++LL+Y+++ ++ Sbjct: 603 VNPADISILLVYLEQGKIQ 621 >gi|327295821|ref|XP_003232605.1| mitochondrial translation optimization protein [Trichophyton rubrum CBS 118892] gi|326464916|gb|EGD90369.1| mitochondrial translation optimization protein [Trichophyton rubrum CBS 118892] Length = 693 Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust. Identities = 286/634 (45%), Positives = 393/634 (61%), Gaps = 23/634 (3%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 R YDVIV+GGGHAG EA A AA+ GA TAL+T S IG SCNP+ GG+GKG ++REI Sbjct: 34 TRPYDVIVVGGGHAGSEACAAAARSGARTALVTPSRSDIGVCSCNPSFGGIGKGTMIREI 93 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DALDG+ GR D AGIQFR+LN KGPAV GPR Q DR LY+ M E+ + L +++G Sbjct: 94 DALDGVAGRTVDKAGIQFRILNRSKGPAVWGPRAQIDRALYKKYMLEELTNTPGLSIVEG 153 Query: 123 EVA----------GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAG 172 +VA N + I + ++ +I V++TTGTFL G IHIG P+G Sbjct: 154 KVADIVISKENMTSLNGSQGEIIGVRLESGEVIPTGKVIITTGTFLGGEIHIGLDVFPSG 213 Query: 173 RMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK 232 RMG++ + L S + F GRLKTGTP RLD KTI + E Q D PFS++ D Sbjct: 214 RMGEAATFGLSKSLREAGFQLGRLKTGTPPRLDRKTIDFSTLEVQPGDSPPSPFSYLNDS 273 Query: 233 IT---NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERN 289 + Q+ C TN +H ++ EN+ S + GPRYCPS+E KI+RF ++ Sbjct: 274 VQIGDKGQLSCWAAHTNEASHAVVRENLNKSIHIRETVN--GPRYCPSLESKIIRFKDKP 331 Query: 290 GHQIFLEPEGLN-TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINP 348 H I+LEPEGL DV+YPNGIS +P + Q + +RT+ GLE V +++PGY +EYDY++P Sbjct: 332 RHMIWLEPEGLAPNDVIYPNGISMTIPADAQEKMLRTVRGLENVTMLQPGYGVEYDYVDP 391 Query: 349 KELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYI 408 + L PTLETK ISGL+LAGQINGTTGYEEAAAQG++AGIN+ S + SR D +I Sbjct: 392 RSLRPTLETKLISGLYLAGQINGTTGYEEAAAQGIIAGINAGLASQSKPPMTLSRADGFI 451 Query: 409 GVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYI 468 G+MIDDL +KGV EPYRMFT+R+EYRIS R DNAD RLT G G + +R ++F + Sbjct: 452 GIMIDDLITKGVSEPYRMFTTRSEYRISTRSDNADLRLTARGRAAGVVSAKRWRQFNQTK 511 Query: 469 QEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA--- 525 ++ ++L++LL++ S + + D R+A+E LS+ S+ ++ A Sbjct: 512 EQMSYLQALLENTKHPSTLWARKGFPVRTDSSVRSAFELLSHNGVSLDDVIPHIESAPGT 571 Query: 526 ----RKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELK 581 FSS + R+ IE YA YT RQ A + +E L+P D DYS++ LS E + Sbjct: 572 IHSLSSFSSEIKSRMAIEGRYAPYTKRQEATALLFERDEGMLLPPDIDYSTMLGLSTEER 631 Query: 582 EKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 + L ++P ++ A ++EG+TP LL++++K Sbjct: 632 QVLEKVRPVSIGMARRVEGVTPVGALKLLMHVRK 665 >gi|258517428|ref|YP_003193650.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Desulfotomaculum acetoxidans DSM 771] gi|257781133|gb|ACV65027.1| glucose inhibited division protein A [Desulfotomaculum acetoxidans DSM 771] Length = 634 Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust. Identities = 277/618 (44%), Positives = 389/618 (62%), Gaps = 12/618 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+V+G GHAGCEAA +A++G T ++T +G M CNPA+GG K LVREIDAL Sbjct: 8 YDVVVVGAGHAGCEAALASARMGCKTLVVTVNLDNVGLMPCNPAVGGPAKSQLVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G +G D IQ R+LN KGPAV R QAD+ LY + M+R + +Q NL + Q + Sbjct: 68 GGEIGNNTDQVAIQMRMLNTAKGPAVHALRAQADKNLYHVNMKRVLENQPNLFLKQLTIE 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + ++ + C V+LTTGT+L+G I IG L G G+ PS L +S Sbjct: 128 KILVENDKVVGVIAAAGARFACKAVILTTGTYLKGRIIIGDLAYSGGPQGNFPSIGLSDS 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + + GR KTGTP R+D ++ + K Q D+RL+ FSF + +Q+ C +T T Sbjct: 188 LKEIGLELGRFKTGTPPRIDRNSVDFSKMSIQPGDDRLLNFSFESKVEDRKQVPCWLTYT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N TH+II +N+ S +++G IK GPRYCPSIEDK+VRF E+ HQ+F+EPEGL T + Sbjct: 248 NENTHKIIRDNLHRSPLFAGVIKGTGPRYCPSIEDKVVRFSEKPKHQVFIEPEGLTTTEM 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G++T+LPE++Q +RTIPGLEKV I+R GYAIEYDY+ P +L +LE+KKISGLF Sbjct: 308 YVQGMNTSLPEDVQLAMLRTIPGLEKVEIMRTGYAIEYDYLPPSQLKLSLESKKISGLFS 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGT+GYEEAAAQG++AGINS + + SR D+YIGV+IDDL +KG+ EPYR Sbjct: 368 AGQINGTSGYEEAAAQGIMAGINSVLYIKEKEPFILSRADAYIGVLIDDLVTKGITEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 + TSRAEYR+ LR DNAD RL+ +G LG I + R RF ++ F L SL +T Sbjct: 428 LLTSRAEYRLLLRQDNADLRLSDMGYNLGLIQQDRYDRFCNKREKIKFEIERLSSLSVTV 487 Query: 486 --------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 KN+ ++ I Q G + L P+ S ++L I + + S +IE ++ Sbjct: 488 NENVKQILKNIGTSEIP--QQGIKMAS--LLRRPEVSYKDLIKINKEKVELSDDIIEEVE 543 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ Y Y +Q + ++ K E RL+P DYS + L+ E KL+ +KP ++ QAS+ Sbjct: 544 IQIKYEGYIKKQTAQIEKFKKIEGRLLPAALDYSKVRGLAAEAALKLNQIKPLSIGQASR 603 Query: 598 IEGMTPAALNLLLIYIKK 615 I G+ PA +++L+IY+++ Sbjct: 604 IGGVNPADISVLMIYLEQ 621 >gi|238025741|ref|YP_002909972.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Burkholderia glumae BGR1] gi|237874935|gb|ACR27268.1| Glucose inhibited division protein A [Burkholderia glumae BGR1] Length = 656 Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust. Identities = 287/626 (45%), Positives = 388/626 (61%), Gaps = 15/626 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALAAARMGVKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D AGIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 67 GGAMAIATDEAGIQFRILNSSKGPAVRATRAQADRLLYKQAIRSRLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + V Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 127 DLIVEGERVVGAVTQIGIRFRARAVVLTAGTFLDGKIHVGLNNHTGGRAGDPAAVSLSAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQIECGIT 243 + GRLKTGTP R+DG++I + K E+Q D +P FSF+ + RQ+ C +T Sbjct: 187 LKELKLPQGRLKTGTPPRIDGRSIDFSKLEEQPGDLDPVPVFSFLGRAEQHPRQLPCWVT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T+ Sbjct: 247 HTNERTHDIIRSGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP ++Q + ++ GLE +I+RPGYAIEYDY +P+ L +LETK I GL Sbjct: 307 EFYPNGISTSLPFDVQLDLVHSMRGLEHAHILRPGYAIEYDYFDPRGLKASLETKVIEGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ R + + C R +Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGINAGRYAQDKEAWCPRRDQAYLGVLVDDLVTRGVSEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLT +G +LG + + R F++ + L++ + Sbjct: 427 YRMFTSRAEYRLSLREDNADMRLTEMGRELGVVDDVRWDAFSRKRDAVSRETERLRATWV 486 Query: 484 TSKNLS---STSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----CPDARKFS------S 530 T K L+ +T++ K + E L P S + + C A + + Sbjct: 487 TPKTLAVEEATALLGKAIDHEYSLAELLRRPGVSYAGVCGLRGGECAPAEPLADDPVLLA 546 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 + E+++I Y Y RQ E + E +P DY+ + LS E ++KL+ +P Sbjct: 547 QIEEQIEIGIKYQGYIERQAGEIERNGAHENTRLPDGIDYAEVRGLSFEARQKLNQHRPE 606 Query: 591 NLLQASKIEGMTPAALNLLLIYIKKN 616 + QAS+I G+TPAA++LL++++K+ Sbjct: 607 TIGQASRISGITPAAISLLMVHLKRG 632 >gi|195027347|ref|XP_001986544.1| GH20470 [Drosophila grimshawi] gi|193902544|gb|EDW01411.1| GH20470 [Drosophila grimshawi] Length = 658 Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust. Identities = 288/636 (45%), Positives = 417/636 (65%), Gaps = 36/636 (5%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAG EA A AA++GA T L+THK TIG MSCNP+ GG+GKGHL+RE+DAL Sbjct: 27 YDVIVIGGGHAGTEACAAAARMGARTLLLTHKLDTIGEMSCNPSFGGIGKGHLMREVDAL 86 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDV------ 119 DG+ R D +G+ ++VLN ++GPAV GPR Q DR+LY+ A+QRE+ + NL++ Sbjct: 87 DGVCARCCDVSGVHYKVLNKRRGPAVWGPRAQIDRQLYKRAVQRELFNTANLEIRAAGVD 146 Query: 120 -IQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSP 178 +Q +V ++ S +++++ ++R VVLTTGTFLR I+IG AGRMGD P Sbjct: 147 NLQIDVDESSSSNTRCSGVLLENGELVRSRAVVLTTGTFLRAHINIGLEVREAGRMGDKP 206 Query: 179 SNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI---TN 235 + +L + + +F GRLKTGTP R+ +I + + EK AD+ +PFSF+ D++ + Sbjct: 207 AKALGEALNRLNFRMGRLKTGTPPRIARSSIDFTQLEKHAADDPPVPFSFLNDEVWLPAS 266 Query: 236 RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFL 295 Q+ C +T T I+ EN+ + + ++ GPRYCPSIE K++RFG R HQ++L Sbjct: 267 EQMPCYLTYTTPRVDEIVRENMHQNRHVTEEVT--GPRYCPSIESKVLRFGARV-HQVWL 323 Query: 296 EPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTL 355 EPEG ++ + YP GIS LP Q + +R I GLE +++PGY +EYD+I+P+EL+PTL Sbjct: 324 EPEGFDSPLCYPQGISCTLPHAQQVELVRAIKGLESAEVVQPGYGVEYDFIDPRELYPTL 383 Query: 356 ETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARK--SNKLDCICFSRTDSYIGVMID 413 ETK++SGLF AGQINGTTGYEEAAAQG++AG N+A K S + SRT+ YIGV+ID Sbjct: 384 ETKRVSGLFFAGQINGTTGYEEAAAQGIIAGANAAGKTLSQNGQQLSISRTEGYIGVLID 443 Query: 414 DLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNF 473 DLTS G EPYRMFTSRAE+R+SLRPDNAD RLT G K G + E+R + F + Q+ Sbjct: 444 DLTSLGTNEPYRMFTSRAEFRLSLRPDNADMRLTEKGYKFGLVSEKRYQHFQQTEQK--- 500 Query: 474 LRSLLKSLVLTSKNLSSTSISFKQ--------DGKTRTAYEFLSYP--DFSIQNLFSICP 523 L++ +KSL K L S F+Q ++A++ L+ P + ++ L +CP Sbjct: 501 LKAGIKSL----KGLQKHSNFFRQALGLPQTKASIQKSAFDMLAVPADNITVDQLIDLCP 556 Query: 524 DARKF---SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDY-SSLPALSNE 579 + + RL+IE+ Y+ + Q + ++++ EE+ IP D DY S +LSNE Sbjct: 557 GELSWLRTDGDISARLKIEALYSFFVDEQQRDVEDVRREERLCIPTDIDYFSKSLSLSNE 616 Query: 580 LKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 ++K+++++P + AS+I+G+TP+ + +L Y+KK Sbjct: 617 ERQKVTLIQPQTIAAASRIQGVTPSTILRILKYVKK 652 >gi|262369744|ref|ZP_06063072.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Acinetobacter johnsonii SH046] gi|262315812|gb|EEY96851.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Acinetobacter johnsonii SH046] Length = 626 Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust. Identities = 286/617 (46%), Positives = 389/617 (63%), Gaps = 6/617 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GK HLVREID Sbjct: 5 KVYDVIVIGGGHAGTEAALAAARMGRQTLLLTHNIETLGQMSCNPAIGGIGKSHLVREID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M AD GIQFR+LN +KG AVR R QADR Y+ A++ + +Q NLD+ Q Sbjct: 65 ALGGAMALAADKGGIQFRILNSRKGAAVRATRAQADRIRYKAAIRDTLENQANLDIFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 E + + +V Q TVVLT GTFL GVIH+G K GR GD PS SL Sbjct: 125 ADDLIVEGDTVKGVVTQTGIRFDAKTVVLTAGTFLGGVIHVGLEKSSGGRAGDPPSISLA 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + + + GRLKTGTP R+D +++ + Q D SFM D + Q+ C I Sbjct: 185 HRLRELNLPVGRLKTGTPPRIDARSVDFSVMIPQPGDFPSPTMSFMGDASMHPEQVNCYI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II + S +Y+G I+ GPRYCPSIEDKI RF +++ HQ+FLEPEGL+T Sbjct: 245 THTNEKTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFADKDSHQVFLEPEGLDT 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNGIST+LP ++Q + +R+I G+E +I+RPGYAIEYDY NP+ L TLETK I+ Sbjct: 305 HELYPNGISTSLPFDVQFELVRSIRGMENAHILRPGYAIEYDYFNPQALKFTLETKAINN 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQINGTTGYEEA AQGL+AG+N+AR++ + R ++Y+GV++DDL + G E Sbjct: 365 LYFAGQINGTTGYEEAGAQGLLAGLNAARRAWDQEQWTPKRDEAYMGVLVDDLITLGTKE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLTP+G ++G + + R + + ++ L+ L Sbjct: 425 PYRMFTSRAEYRLMLREDNADQRLTPVGREMGLVDDVRWAAYCEKMEAVEQETGRLQHLW 484 Query: 483 LTSKNLSS---TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 N ++ K +A + L P+ S + + + S+ V ++++I Sbjct: 485 AAPNNPMGKKFVEMTGADLSKECSAIDLLKRPNISFAQIAELT--RSEVSAQVGDQIEIA 542 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 YA Y RQ + ++K E+ IP DF+Y + LS E+ KL ++P L QA++I Sbjct: 543 VKYAGYINRQHEDVAQMKRLEETKIPADFNYDVVSGLSREITLKLKDVRPETLAQANRIP 602 Query: 600 GMTPAALNLLLIYIKKN 616 G+TPAA+ L++I I+KN Sbjct: 603 GVTPAAVQLIMITIRKN 619 >gi|205831579|sp|A1WGT2|MNMG_VEREI RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A Length = 658 Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust. Identities = 288/645 (44%), Positives = 391/645 (60%), Gaps = 31/645 (4%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DVIV+G GHAG EAA AA+LG T L+T T+G MSCNP+IGG+GKGHLV+E+D Sbjct: 5 QEFDVIVVGAGHAGTEAALAAARLGQRTLLLTQSLETLGQMSCNPSIGGIGKGHLVKEVD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR+LN KGPAVR R QADR LY+ A++R + +Q L + Q Sbjct: 65 ALGGAMALATDESGIQFRILNRSKGPAVRATRAQADRLLYKAAIRRRLENQPGLWLFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + + V Q + VVLT GTFL G IH+G AGR G+ + L Sbjct: 125 VDDLMLEGDRVVGAVTQVGVVFCARAVVLTAGTFLDGKIHVGLSHYAAGRAGEPSAIGLS 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFAD-------ERLIP-FSFMTD---- 231 + GRLKTGTP R+DG++I W + E+Q D +P FSFM Sbjct: 185 ARLKELKLPQGRLKTGTPPRIDGRSIDWSQCEEQPGDGMPGGVNAGQVPVFSFMAHAYGG 244 Query: 232 -KITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNG 290 ++ +Q+ C IT TN TH II S +++G I+ GPRYCPS+EDKI RF +++ Sbjct: 245 ARMHPQQLPCWITHTNQRTHAIIRSGFDRSPMFTGSIEGVGPRYCPSVEDKINRFADKDS 304 Query: 291 HQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKE 350 HQ+FLEPEGL T VYPNGIST+LP +IQ+Q +R++ GLE +I+RPGYAIEYDY +P+ Sbjct: 305 HQVFLEPEGLGTHEVYPNGISTSLPFDIQYQLVRSMAGLENAHILRPGYAIEYDYFDPRA 364 Query: 351 LFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGV 410 L ET++I GLF AGQINGTTGYEEAAAQGL AG+N+A + R +Y+GV Sbjct: 365 LKSNFETRQIRGLFFAGQINGTTGYEEAAAQGLFAGVNAALQCRGDAPWLPGRDQAYLGV 424 Query: 411 MIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQE 470 ++DDL +KGV EPYRMFTSRAE+R+ LR DNAD RLT +G ++G + + R + F++ Sbjct: 425 LVDDLITKGVTEPYRMFTSRAEFRLQLREDNADMRLTEVGRRMGLVDDARWEVFSRKRDA 484 Query: 471 YNFLRSLLKSLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARK 527 LK+ + +NL S + K + +E L PD L S+ D K Sbjct: 485 VLRETERLKATWVNPRNLPDIESGRVLGKPMAHEYSLFELLRRPDVDYAGLMSL--DGGK 542 Query: 528 FSSL-------------VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLP 574 +++ V+E+++I + YA Y RQ E + E +P DY+ + Sbjct: 543 YAAADVSRETLGMLSESVVEQVEIAAKYAGYIERQKGEVERAAHFETLRLPAGLDYAQVT 602 Query: 575 ALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 ALS E ++ LS +P L QAS+I G+TPAA++LLL+++KK K Sbjct: 603 ALSIEARQVLSRHRPETLGQASRITGITPAAISLLLVHLKKGGFK 647 >gi|170109500|ref|XP_001885957.1| predicted protein [Laccaria bicolor S238N-H82] gi|164639228|gb|EDR03501.1| predicted protein [Laccaria bicolor S238N-H82] Length = 651 Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust. Identities = 294/622 (47%), Positives = 401/622 (64%), Gaps = 12/622 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDV VIGGGHAGCEAAA AA+ G T L+T K TIG +SCNP+IGG+GKG LVRE+DA Sbjct: 23 SYDVCVIGGGHAGCEAAAGAARTGTRTVLLTQKLETIGELSCNPSIGGVGKGTLVREVDA 82 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G+MG V D AGIQF++LN KG AV GPR Q DR+LY+ +Q + + NLD+ G V Sbjct: 83 LGGIMGGVVDKAGIQFQILNRTKGAAVWGPRAQIDRKLYKKNIQNVLHNYPNLDIRAGSV 142 Query: 125 AGFNTEKN--------IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGD 176 +++ IS + ++ +I CS VV+ TGTFL G IHIG + PAGR+G+ Sbjct: 143 FDIVIDQSDNTLGRWGKISGVKLETGEIIPCSQVVICTGTFLSGEIHIGLNRFPAGRLGE 202 Query: 177 SPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN- 235 +PS L S F GRL+TGTPARLD TI + E+Q D PFSFM + N Sbjct: 203 APSIGLSASLNAAGFKLGRLQTGTPARLDISTIDFGGLERQDGDVVPSPFSFMNRTVANA 262 Query: 236 -RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 Q+ C T T ETH+II +NI H +++ + + GPRYCPS+E K++RFG ++ H ++ Sbjct: 263 DNQVYCYKTATTPETHQIIKDNI-HLSVHIQETRK-GPRYCPSLEAKVLRFGHKDHHTVW 320 Query: 295 LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT 354 LEPEG ++D++YPNGIS ++PEE+Q IRTIPGLE +++P Y +EYDYI+P+EL PT Sbjct: 321 LEPEGYDSDLIYPNGISCSIPEELQETMIRTIPGLENAKMVKPAYGVEYDYIDPRELGPT 380 Query: 355 LETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDD 414 LET +I GLFLAGQINGTTGYEEAAAQG+VAGIN+ K + +R D + GVMIDD Sbjct: 381 LETNRIKGLFLAGQINGTTGYEEAAAQGIVAGINAGLAVLKRPPLVLTRADGFTGVMIDD 440 Query: 415 LTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFL 474 L KG EPYRMFTSR+EYR+++R DNAD RLT G + G I + R F + Sbjct: 441 LIVKGAEEPYRMFTSRSEYRMTIRSDNADMRLTEKGREAGVISDERWSAFNETRTTMADA 500 Query: 475 RSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIE 534 LKSLV + + ++ + ++DG R+A++ L YP + + L P+ R ++ Sbjct: 501 TKRLKSLVFSPQGWAAHGVRVQRDGILRSAFQMLRYPGVTTEFLKGAVPELRDIHPSILS 560 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 R+ +E Y A+ RQ + K +E L+ +YS++P LS+E+ E+L +KP + Sbjct: 561 RIDVEGQYDAHLTRQEADLKTFMEDESLLLDPRMEYSTVPGLSSEVVERLYRVKPTTIGA 620 Query: 595 ASKIEGMTPAALNLLLIYIKKN 616 A ++EGMTP ++ LL + K+ Sbjct: 621 AKRMEGMTPTSVVYLLKHAKRT 642 >gi|91090344|ref|XP_967278.1| PREDICTED: similar to glucose inhibited division protein a [Tribolium castaneum] Length = 659 Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust. Identities = 296/634 (46%), Positives = 416/634 (65%), Gaps = 27/634 (4%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 +++YDVIV+GGGHAG EA+A AA++GA T L+THK T+G MSCNP+ GG+GKGHL+REI Sbjct: 27 DKNYDVIVVGGGHAGSEASAAAARMGAQTLLVTHKKETVGEMSCNPSFGGIGKGHLMREI 86 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREIL-SQENLDVIQ 121 DALDG+ GR+ D +GIQ++VLN +KGPAV G R Q DR+LY+ +Q E+ + NLD++ Sbjct: 87 DALDGICGRMCDLSGIQYKVLNKRKGPAVWGYRAQIDRDLYKKHIQTELFENTPNLDILV 146 Query: 122 GEVAGFNTEKNIISS----------IVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPA 171 V E +S I++ D + I +V++TTGTFL G I+IG PA Sbjct: 147 ASVEDLIVENPTTNSNKQTVIDCHGIILSDGTKIHAKSVIITTGTFLNGQINIGTKIYPA 206 Query: 172 GRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD 231 GR+GD PS L + GRLKTGTP RL+ TI + + Q D +PFSFM D Sbjct: 207 GRIGDQPSIGLAKTLAALSLKMGRLKTGTPPRLNSNTINYKVCDIQKGDNPPLPFSFMND 266 Query: 232 KITNR---QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGER 288 K+ + Q+ C +T+T+L+ II N+ + + ++ GPRYCPSIE K++RFG R Sbjct: 267 KVWIKPEDQLVCYLTKTSLDIEPIIRNNLHVNRHVTEEVT--GPRYCPSIESKVLRFGGR 324 Query: 289 NGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINP 348 HQ++LEPEGL +D+VYPNG+S LPEE+Q + I +IPGLEK I RPGY +EYD+++P Sbjct: 325 Q-HQVWLEPEGLTSDIVYPNGLSCTLPEELQFELIHSIPGLEKAEITRPGYGVEYDFVDP 383 Query: 349 KELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYI 408 +EL TLE K+I LFLAGQINGTTGYEEAAAQG++AGIN+ KS I SRT+ YI Sbjct: 384 RELQTTLELKRIHNLFLAGQINGTTGYEEAAAQGIIAGINALGKSP----ITVSRTEGYI 439 Query: 409 GVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYI 468 GV+IDDLT+ G EPYRMFTSRAE+R++LRPDNAD RLT G ++GC+ + R + Sbjct: 440 GVLIDDLTTLGTNEPYRMFTSRAEFRLTLRPDNADQRLTAKGYQVGCVNKARYDKMVAMQ 499 Query: 469 QEYNFLRSLLKSLVLTSKNLSS-TSISFKQDGKTRTAYEFLSYPD--FSIQNLFSICPDA 525 ++ N SLLKS+ ++ ++ ++ ++A+ L + +I L ++ P+ Sbjct: 500 KKLNDGISLLKSITKPARTWRKLLKMAPSRNMMQKSAFNMLDCYNEGITISMLATVAPEL 559 Query: 526 RKFSS--LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFD-YSSLPALSNELKE 582 + L+ RL IE++Y A Q +E +E++ EE LIPKD D YS L++E +E Sbjct: 560 LPLTHDPLLENRLHIEATYEAAASEQAVEVEEVRKEEALLIPKDLDYYSDTLNLNSEERE 619 Query: 583 KLSILKPFNLLQASKIEGMTPAALNLLLIYIKKN 616 KL ++P + AS+I G++P+++ LL ++KKN Sbjct: 620 KLCSIQPQTIAAASRIPGISPSSVFRLLRFVKKN 653 >gi|326472355|gb|EGD96364.1| mitochondrial translation optimization protein [Trichophyton tonsurans CBS 112818] Length = 693 Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust. Identities = 285/633 (45%), Positives = 392/633 (61%), Gaps = 23/633 (3%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R YDVIV+GGGHAG EA A AA+ GA TAL+T S IG SCNP+ GG+GKG ++REID Sbjct: 35 RPYDVIVVGGGHAGSEACAAAARSGARTALVTPSRSDIGVCSCNPSFGGIGKGTMIREID 94 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDG+ GR D AGIQFR+LN KGPAV GPR Q DR LY+ M E+ + L +++G+ Sbjct: 95 ALDGVAGRTVDKAGIQFRILNRSKGPAVWGPRAQIDRALYKKYMLEELTNTPGLSIVEGK 154 Query: 124 VA----------GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGR 173 VA N + I + ++ +I V++TTGTFL G IHIG P+GR Sbjct: 155 VADIVISKENKTSLNGSQGEIVGVRLESGEVIPTGKVIITTGTFLGGEIHIGLDVFPSGR 214 Query: 174 MGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI 233 MG++ + L S + F GRLKTGTP RLD KTI + E Q D PFS++ D + Sbjct: 215 MGEAATFGLSKSLREAGFQLGRLKTGTPPRLDRKTIDFSTLEVQPGDSPPSPFSYLNDSV 274 Query: 234 T---NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNG 290 Q+ C TN +H ++ EN+ S + GPRYCPS+E KI+RF ++ Sbjct: 275 QIGDKGQLNCWAAHTNEASHAVVRENLNKSIHIRETVN--GPRYCPSLESKIIRFKDKPR 332 Query: 291 HQIFLEPEGLN-TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPK 349 H I+LEPEGL DV+YPNGIS +P + Q + +RT+ GLE V +++PGY +EYDY++P+ Sbjct: 333 HMIWLEPEGLAPNDVIYPNGISMTIPADAQEKMLRTVRGLENVTMLQPGYGVEYDYVDPR 392 Query: 350 ELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIG 409 L PTLETK ISGL+LAGQINGTTGYEEAAAQG++AGIN+ S + SR D +IG Sbjct: 393 SLRPTLETKLISGLYLAGQINGTTGYEEAAAQGIIAGINAGLASQSKPPMTLSRADGFIG 452 Query: 410 VMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQ 469 +MIDDL +KGV EPYRMFT+R+EYRIS R DNAD RLT G G + + R ++F + + Sbjct: 453 IMIDDLITKGVSEPYRMFTTRSEYRISTRSDNADLRLTAKGRAAGVVSDERWRQFNETKE 512 Query: 470 EYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA---- 525 + ++L++LL++ S + + D R+A+E LS+ S+ ++ A Sbjct: 513 QMSYLQALLENTKHPSTVWARKGFPVRTDSSVRSAFELLSHNGVSLDDVIPHIESAPGTI 572 Query: 526 ---RKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKE 582 FS + R+ IE YA YT RQ A + +E L+P D DYS++ LS E ++ Sbjct: 573 HSLSSFSPEIKSRMAIEGRYAPYTKRQEATALLFERDEGMLLPPDIDYSTMLGLSTEERQ 632 Query: 583 KLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 L ++P ++ A ++EG+TP LL++++K Sbjct: 633 VLEKVRPVSIGMARRVEGVTPVGALKLLMHVRK 665 >gi|152991802|ref|YP_001357523.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Sulfurovum sp. NBC37-1] gi|205831575|sp|A6Q6Q7|MNMG_SULNB RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|151423663|dbj|BAF71166.1| glucose inhibited division protein A [Sulfurovum sp. NBC37-1] Length = 623 Score = 533 bits (1373), Expect = e-149, Method: Compositional matrix adjust. Identities = 290/623 (46%), Positives = 390/623 (62%), Gaps = 21/623 (3%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIGGGHAG EA+ +A++G T LIT IG+ SCNPAIGGL KGHLVRE+DA Sbjct: 2 NYDVIVIGGGHAGIEASLASARMGVKTLLITILAEQIGASSCNPAIGGLAKGHLVREVDA 61 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG DA GIQFR LN KGPAVRG R Q D + YR+ M+ +L+ ENLDV Q Sbjct: 62 LGGEMGLCTDATGIQFRTLNASKGPAVRGSRAQIDMDEYRIYMRNVVLNTENLDVKQEIA 121 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 G E+ + + Q + S V++T GTFL G+IHIG K AGR G+ S L Sbjct: 122 DGLIVEEGEVKGVTTQLGNRYTASKVIITAGTFLNGLIHIGDKKQTAGRQGEFASVELAE 181 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--NRQIECGI 242 + GRLKTGT AR+D K++ E Q D PFSF TDK T +Q+ C + Sbjct: 182 YLKGLGLNIGRLKTGTCARIDAKSVDTSVMEVQPGDTPPPPFSFRTDKSTFNPKQLPCYV 241 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 TN TH II N + ++SG I+ GPRYCPSIEDKI RF +R HQIF+EP+ ++ Sbjct: 242 AYTNERTHEIIESNFYRAPMFSGQIEGVGPRYCPSIEDKINRFRDRPRHQIFVEPQTIDE 301 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 Y NG+ST+LP ++Q + +R++ G++ I+R GYAIEYDY++P EL TLETKKI G Sbjct: 302 TEYYINGMSTSLPIDVQLEMVRSVEGMKNAKIVRYGYAIEYDYVDPTELKHTLETKKIKG 361 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQINGTTGYEEAAAQGL+AGIN+A + + R ++YIGV+IDDL +KG E Sbjct: 362 LYTAGQINGTTGYEEAAAQGLMAGINAALSIQGKEALILRRDEAYIGVLIDDLVTKGTKE 421 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIG-------ERRQKRFAK---YIQEYN 472 PYRMFTSRAEYR+ LR DNAD RL+ G +LG + E +QK + Y+QE N Sbjct: 422 PYRMFTSRAEYRLLLREDNADMRLSKYGKELGLLDDAYIAKFEEKQKNIEEALNYLQE-N 480 Query: 473 FLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAY-EFLSYPDFSIQNLFSICPDARKFSSL 531 ++ + K + + + + I+ RT + + + DF+ L S+ P+ K+ Sbjct: 481 YV-TPTKEFLAKLEAIGAVKIN------DRTCWIDVIGRGDFNRDKLVSLLPEFDKYDDE 533 Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 V+ ++ +E+ Y+ Y +Q ++ ++K K IP+DF Y ++ LSNE+ EKL P Sbjct: 534 VMGQILVEAKYSRYIEKQQMQIDQMKDMLKIKIPEDFTYKNVSGLSNEIVEKLEKANPTT 593 Query: 592 LLQASKIEGMTPAALNLLLIYIK 614 L AS+I G+TPAAL ++ +YIK Sbjct: 594 LFAASEISGVTPAALEIIHVYIK 616 >gi|300689821|ref|YP_003750816.1| glucose-inhibited division protein A, tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Ralstonia solanacearum PSI07] gi|299076881|emb|CBJ49494.1| Glucose-inhibited division protein A, tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Ralstonia solanacearum PSI07] Length = 647 Score = 533 bits (1373), Expect = e-149, Method: Compositional matrix adjust. Identities = 286/629 (45%), Positives = 386/629 (61%), Gaps = 15/629 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALAAARMGCQTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q V Sbjct: 67 GGAMALATDEGGIQFRILNSSKGPAVRATRAQADRVLYKAAIRRRLENQPNLMLFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + V Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 127 DLLVEGDRAVGAVTQVGVRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFM-TDKITNRQIECGIT 243 + GRLKTGTP R+DG+TI + E+Q D +P FSF+ + RQ+ C +T Sbjct: 187 LKELKLPQGRLKTGTPPRIDGRTIDFSVLEEQPGDLDPVPVFSFLGRADMHPRQVPCWVT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T+ Sbjct: 247 HTNQHTHDIIRAGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNG+ST+LP ++Q I ++ GLE +I+RPGYAIEYDY +P+ L +LE+K I GL Sbjct: 307 EFYPNGVSTSLPFDVQLDLIHSMRGLENAHILRPGYAIEYDYFDPRGLKASLESKAIGGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ + + R +Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGINAGLQVQGKEAWTPRRDQAYLGVLVDDLITRGVTEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R+SLR DNAD RLT G LG + + R F + + LKS + Sbjct: 427 YRMFTSRAEFRLSLREDNADMRLTEAGRGLGVVDDVRWDAFNRKRDAVSRETERLKSTWV 486 Query: 484 TSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----------CPDARKFSS 530 + L + + K + + + L P+ + ++L + D + Sbjct: 487 SPAILPVADAEPVLGKGIEREYSLADLLRRPNVTYESLMGMQGAKYAPEAPLADEPLLAE 546 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 V E+++I Y Y RQ E + + E +P DFDY+ + LS E+++KL+ KP Sbjct: 547 QVREQIEIGIKYHGYIARQADEVERLGANESTRLPADFDYTQVRGLSIEVQQKLAQHKPE 606 Query: 591 NLLQASKIEGMTPAALNLLLIYIKKNTVK 619 + QAS+I G+TPAA++LLL+++KK ++ Sbjct: 607 TIGQASRISGITPAAVSLLLVHLKKGVLR 635 >gi|59713182|ref|YP_205958.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio fischeri ES114] gi|197333896|ref|YP_002157362.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio fischeri MJ11] gi|75353166|sp|Q5E1M6|MNMG_VIBF1 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|238690284|sp|B5FDA8|MNMG_VIBFM RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|59481283|gb|AAW87070.1| glucose-inhibited cell-division protein [Vibrio fischeri ES114] gi|197315386|gb|ACH64833.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio fischeri MJ11] Length = 629 Score = 533 bits (1373), Expect = e-149, Method: Compositional matrix adjust. Identities = 287/622 (46%), Positives = 393/622 (63%), Gaps = 15/622 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIVIGGGHAG EAA AA+ G +T L+TH T+G MSCNPAIGG+GKGHLV+E+DA Sbjct: 6 NFDVIVIGGGHAGTEAALAAARTGQNTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLM + D +GIQFR LN KGPAVR R QADR LY+ ++ + +Q NL + Q V Sbjct: 66 LGGLMAQAIDHSGIQFRTLNASKGPAVRATRAQADRALYKAYVRSVLENQPNLTLFQQAV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + V Q R +VVLT GTFL G IHIG GR GD S +L Sbjct: 126 DDLIIENDKVMGAVTQMGLKFRAKSVVLTAGTFLGGQIHIGMENFSGGRAGDPSSITLAQ 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 + F RLKTGTP R+D +++ + E Q D FSF+ + + +Q+ C IT Sbjct: 186 RLRERPFRIDRLKTGTPPRIDARSVDFSGLEAQPGDNPTPVFSFLGKREHHPQQVNCFIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +++ HQIF+EPEGL+T Sbjct: 246 HTNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKDSHQIFIEPEGLSTH 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK I GL Sbjct: 306 ELYPNGISTSLPFDVQLQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKSTYETKFIEGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N++ + + R ++Y+GV+IDDL++ G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLMAGLNASLFAQGKEGWSPRRDEAYMGVLIDDLSTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT G LG + + R RF + ++ R LK + + Sbjct: 426 YRMFTSRAEYRLLLREDNADLRLTEQGRTLGLVDDVRWARFNEKVENMEQERQRLKDIWI 485 Query: 484 TSKN--------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIE 534 K+ + T I+ + G+ + L P+ + Q+L SI S E Sbjct: 486 NPKSEQVDQVNAILKTPIAREASGE-----DLLRRPEVNYQSLVSIDGFGPALEDSQASE 540 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ YA Y RQ E ++ E +P D DY + LSNE+ KLS KP + Sbjct: 541 QVEIQVKYAGYIQRQRDEIEKSLRHENTKLPFDLDYKEVKGLSNEVVAKLSDAKPETIGI 600 Query: 595 ASKIEGMTPAALNLLLIYIKKN 616 AS+I G+TPAA+++LL+++KK+ Sbjct: 601 ASRISGITPAAISILLVHLKKH 622 >gi|262279572|ref|ZP_06057357.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Acinetobacter calcoaceticus RUH2202] gi|262259923|gb|EEY78656.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Acinetobacter calcoaceticus RUH2202] Length = 626 Score = 533 bits (1373), Expect = e-149, Method: Compositional matrix adjust. Identities = 288/619 (46%), Positives = 388/619 (62%), Gaps = 6/619 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GK HLVREID Sbjct: 5 KVYDVIVIGGGHAGTEAALAAARMGRQTLLLTHNIETLGQMSCNPAIGGIGKSHLVREID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M AD GIQFR+LN +KG AVR R QADR Y+ A++ + +Q NLD+ Q Sbjct: 65 ALGGAMALAADKGGIQFRILNSRKGAAVRATRAQADRVRYKAAIRDTLENQANLDIFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 E + + +V Q TVVLTTGTFL GVIH+G K GR GD PS +L Sbjct: 125 ADDLIVEGDTVKGVVTQMGIRFDAKTVVLTTGTFLGGVIHVGLQKSSGGRAGDPPSIALA 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + GRLKTGTP R+D +++ + Q D SFM D + Q+ C I Sbjct: 185 QRLRELKLPVGRLKTGTPPRIDARSVDFSVMIPQPGDFPSPVMSFMGDASMHPEQVNCYI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II + S +Y+G I+ GPRYCPSIEDKI RF +++ HQ+FLEPEGL+T Sbjct: 245 THTNEKTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFADKDSHQVFLEPEGLDT 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNGIST+LP ++Q + +R+I G+E +I+RPGYAIEYDY NP+ L TLETK I+G Sbjct: 305 HELYPNGISTSLPFDVQFELVRSIRGMENAHILRPGYAIEYDYFNPQALKFTLETKAING 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQINGTTGYEEA AQGL+AG+N+AR++ + + R +Y+GV++DDL + G E Sbjct: 365 LYFAGQINGTTGYEEAGAQGLLAGLNAARRAWEQEEWTPKRDQAYMGVLVDDLITLGTKE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT +G +LG + + R + + ++ S L+ L Sbjct: 425 PYRMFTSRAEYRLMLREDNADQRLTTVGRELGLVDDVRWAAYCEKMEAVERETSRLQHLW 484 Query: 483 LTSKNLSS---TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 N ++ K +A + L P+ + + + + S V E+++I Sbjct: 485 AAPNNPMGKKFVEMTGADLSKECSAIDLLKRPNINFGQIAELT--GSEVSEQVGEQIEIA 542 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ + ++K E+ IP DF+Y + LS E+ +KL + P L QAS+I Sbjct: 543 VKYEGYINRQHEDVAQLKRLEETKIPTDFNYDIVSGLSREITQKLKTVLPETLAQASRIP 602 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+TPAA+ L++I I+KN + Sbjct: 603 GVTPAAVQLVMITIRKNNM 621 >gi|307188483|gb|EFN73226.1| Protein MTO1-like protein, mitochondrial [Camponotus floridanus] Length = 663 Score = 533 bits (1372), Expect = e-149, Method: Compositional matrix adjust. Identities = 286/625 (45%), Positives = 405/625 (64%), Gaps = 19/625 (3%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DVIV+GGGHAG EA+A A ++GA T L+T K +TIG MSCNP+ GG+GKGHL+RE+D Sbjct: 33 KKFDVIVVGGGHAGTEASAAAVRMGAKTLLVTQKKNTIGEMSCNPSFGGIGKGHLMREVD 92 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDG+ R+ D +GI ++VLN KGPAV G R Q DR LY+ +Q E+ + L + + Sbjct: 93 ALDGVCCRICDISGIHYKVLNKCKGPAVWGLRAQIDRTLYKKHLQAELFNMHGLHIYESS 152 Query: 124 VAGFNTEKNIISS--IVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V N +S ++++D + I VV+TTGTFL+G I+IG K PAGR+ D PS Sbjct: 153 VEDLILANNPLSCCGVILRDGTKIFGDAVVITTGTFLKGQINIGLEKRPAGRLNDEPSIG 212 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI---TNRQI 238 L N+ + F GRLKTGTP RL+ +I + K K D+ +PFSFM+D + +QI Sbjct: 213 LANTLDRLGFQIGRLKTGTPPRLEKDSIDFTKCIKYLPDDSSMPFSFMSDNVWLPPEKQI 272 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 +T TN +II +N+ + + +I GPRYCPSIE KI+RF + HQI+LEPE Sbjct: 273 PTYLTYTNEGVAKIIKDNMHCNLHVTEEIT--GPRYCPSIESKILRF-QTPRHQIWLEPE 329 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL++ ++YP+G+S LPEE Q + + IPGLE + +PGY +EYDY++P+EL LET+ Sbjct: 330 GLDSPLIYPSGLSCTLPEEKQVELVNCIPGLENARLAKPGYGVEYDYVDPRELTSQLETR 389 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 KISGLF AGQINGTTGYEEAAAQG+VAG+N+A K K + SRT+ YIGV+IDDLT++ Sbjct: 390 KISGLFFAGQINGTTGYEEAAAQGIVAGVNAAAKVFKKSPLLISRTEGYIGVLIDDLTTE 449 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYRMFTSR+E+R+SLRPDNAD RLT G +GC+ +R + + + + +L Sbjct: 450 GTTEPYRMFTSRSEFRLSLRPDNADQRLTEKGYAVGCVSRKRLDKTIETLSKIQEAIEIL 509 Query: 479 KSLV-LTSKNLSSTSISFKQDGKTRTAYEFLSYPD--FSIQNLFSICPD-----ARKFSS 530 K+ + L+ K + + K+++A+E LS + + + L + P+ AR Sbjct: 510 KNEIRLSFKWRELLKLKSAKTNKSKSAFEMLSITEKKITFEQLANCLPNLLGHLAR--DP 567 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDY-SSLPALSNELKEKLSILKP 589 + ER++IE+ YA Q + ++I+ E+ +IP D +Y SS LS E +EKL+ P Sbjct: 568 TLAERIEIEAKYAHVVADQQDQVEDIRRNEQLIIPDDINYNSSELNLSIEDREKLTKNLP 627 Query: 590 FNLLQASKIEGMTPAALNLLLIYIK 614 + A+KI G+TP+A+ LL YIK Sbjct: 628 STIAAANKISGVTPSAILRLLYYIK 652 >gi|27262248|gb|AAN87405.1| glucose-inhibited division protein A [Heliobacillus mobilis] Length = 643 Score = 533 bits (1372), Expect = e-149, Method: Compositional matrix adjust. Identities = 278/624 (44%), Positives = 390/624 (62%), Gaps = 7/624 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDVIVIG GHAGCEAA AA++G T ++T + M CNPAIGG KGHLVREIDA Sbjct: 15 QYDVIVIGAGHAGCEAALAAARMGCKTLILTISWDNVALMPCNPAIGGPAKGHLVREIDA 74 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG DA IQ R+LN KGPAV R QAD++ Y+ M + + QENLDV Q V Sbjct: 75 LGGQMGVTIDATAIQIRMLNTGKGPAVHALRAQADKKKYQQYMIQVLEHQENLDVRQAMV 134 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ Q + VV+T+GT+L+G I IG L P G G PS L Sbjct: 135 ETIRVEDGQVQGVLTQTGAFFAAPNVVITSGTYLKGRIIIGDLHYPGGPNGYFPSTELAA 194 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S + GR KTGTPAR+DG+T+ + K +Q D + FSF++ + +QI C +T Sbjct: 195 SLREVGVQLGRFKTGTPARVDGRTVDFTKMVEQPGDSDPLNFSFISSRFERKQISCWLTY 254 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETH+II +N+ S +Y+G I+ GPRYCPSIEDK+VRF ++ HQ+F+EPEG +T Sbjct: 255 TTEETHQIIRDNLHRSPLYAGVIEGTGPRYCPSIEDKVVRFADKKSHQVFVEPEGADTHE 314 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+ST+LPE+IQ +R+I G+E V IIRPGYAIEYDY+ P +L +LE + I GLF Sbjct: 315 MYVQGMSTSLPEDIQLAMLRSIIGMENVKIIRPGYAIEYDYVVPTQLKLSLEHQTIQGLF 374 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ+NGT+GYEEAAAQG++AGIN+A ++ + + R+D+YIGV+IDDL +KG EPY Sbjct: 375 TAGQVNGTSGYEEAAAQGIIAGINAACRAQGKEPLILKRSDAYIGVLIDDLVTKGTNEPY 434 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSRAEYR+ LR DNAD RLT IG +G + + R +RF + ++ + L +T Sbjct: 435 RMLTSRAEYRLLLRQDNADQRLTEIGCSIGLVDDVRYERFQRKMERVEQEKELWSKTFVT 494 Query: 485 SKNLSSTSISFKQDG----KTRTAYEFLSYPDFSIQNLFSICP--DARK-FSSLVIERLQ 537 N+ I ++ K + ++ L P+ S +L S+ +AR+ V E+++ Sbjct: 495 PGNIRLQEILEQKRSAPLTKGLSLFDLLRRPELSFDDLHSLLEYDEARETVDPEVAEQVE 554 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I + + Y +Q + + E R +P D DY+ + LS E ++KL +P +L QAS+ Sbjct: 555 ISAKFEGYLVKQQAQVERFNKLESRRVPPDLDYALIGGLSTEARQKLIARRPESLGQASR 614 Query: 598 IEGMTPAALNLLLIYIKKNTVKLN 621 I G+ PA ++LLL+Y+++ + N Sbjct: 615 ISGVNPADISLLLVYLEQRRRRDN 638 >gi|169830196|ref|YP_001700354.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Lysinibacillus sphaericus C3-41] gi|205831530|sp|B1HPM2|MNMG_LYSSC RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|168994684|gb|ACA42224.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA (Glucose-inhibited division protein A) [Lysinibacillus sphaericus C3-41] Length = 630 Score = 533 bits (1372), Expect = e-149, Method: Compositional matrix adjust. Identities = 286/619 (46%), Positives = 398/619 (64%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIVIG GHAG EAA AAK+GA T ++T I M CNP+IGG KG +VREIDA Sbjct: 9 TFDVIVIGAGHAGSEAAHAAAKMGAKTLMLTINLDMIAFMPCNPSIGGPAKGIVVREIDA 68 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G+MG+V D IQ R+LN KGPAVR R QAD+ LY+ M+R + ENL + QG V Sbjct: 69 LGGVMGKVIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRILEETENLTIHQGMV 128 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ ++ Q ++ R TVV+TTGTFLRG I IG +K +G PS L + Sbjct: 129 EELIIEDGEVTGVITQIGAIYRAKTVVVTTGTFLRGEIIIGDIKYSSGPNNQQPSIRLAD 188 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + + FD R KTGTP R++ +TI +DKTE Q DE FSF T + Q+ C +T Sbjct: 189 NLKELGFDLVRFKTGTPPRVNNRTIDYDKTEIQPGDEVPRAFSFETTEFIMDQLPCWLTY 248 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETH II N+ S +YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 249 TSPETHEIIEANLHLSPMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTRE 308 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE +Q + +++IPGLE ++R GYAIEYD I P +L+PTLETK+I GL+ Sbjct: 309 VYVQGLSTSLPEHVQTRLLKSIPGLENAEMMRAGYAIEYDSIVPTQLWPTLETKRIKGLY 368 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAAAQGL+AG+N+A + + SR+D+YIGV+IDDL +KG EPY Sbjct: 369 TAGQINGTSGYEEAAAQGLMAGMNAAANVLGKEELILSRSDAYIGVLIDDLVTKGTNEPY 428 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF----AKYIQEYNFLRS-LLK 479 R+ TSRAEYR+ LR DNAD RL + K+G + + R +F A E LR ++K Sbjct: 429 RLLTSRAEYRLLLRHDNADLRLLELAYKIGMVPQERYDKFNAKKALIENEIARLREIIIK 488 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 T + S S +DG R A + L P+ + + S+ P +F+ V E+++I+ Sbjct: 489 PNEATQAVIRSAGGSELKDG-IRGA-DLLKRPEMHYEMISSLIPADIEFTEEVKEQIEIQ 546 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + +++ +++ E + IP++ DY ++ L+ E ++KL + P ++ QAS+I Sbjct: 547 LKYEGYIEKALLQVEKLHKMENKKIPENIDYDAISGLATEARQKLKQVTPLSIAQASRIS 606 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 607 GVNPADISILLVYIEQGKI 625 >gi|126651989|ref|ZP_01724181.1| glucose-inhibited division protein A [Bacillus sp. B14905] gi|126591258|gb|EAZ85367.1| glucose-inhibited division protein A [Bacillus sp. B14905] Length = 630 Score = 533 bits (1372), Expect = e-149, Method: Compositional matrix adjust. Identities = 278/621 (44%), Positives = 401/621 (64%), Gaps = 11/621 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIVIG GHAG EAA AAK+GA+T ++T I M CNP+IGG KG +VREIDA Sbjct: 9 TFDVIVIGAGHAGSEAAHAAAKMGANTLMLTINLDMIAFMPCNPSIGGPAKGIVVREIDA 68 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G+MG+V D IQ R+LN KGPAVR R QAD+ LY+ M+R + ENL + QG V Sbjct: 69 LGGVMGKVIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRILEETENLTIHQGMV 128 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ ++ Q ++ R TVV+TTGTFLRG I IG +K +G PS L + Sbjct: 129 EELIIEDGEVTGVITQIGAIYRAKTVVVTTGTFLRGEIIIGDIKYSSGPNNQQPSIRLAD 188 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + + FD R KTGTP R++ +TI +DKTE Q DE FSF T + Q+ C +T Sbjct: 189 NLKELGFDLVRFKTGTPPRVNNRTIDYDKTEIQPGDEVPRAFSFETTEFIMDQLPCWLTY 248 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETH II N+ S +YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 249 TSPETHEIIEANLHLSPMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTRE 308 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE +Q + +++IPGLE ++R GYAIEYD I P +L+PTLETK+I GL+ Sbjct: 309 VYVQGLSTSLPEHVQTRLLKSIPGLENAEMMRAGYAIEYDSIVPTQLWPTLETKRIKGLY 368 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAAAQGL+AG+N+A + + SR+D+YIGV+IDDL +KG EPY Sbjct: 369 TAGQINGTSGYEEAAAQGLMAGMNAAANVLGKEELILSRSDAYIGVLIDDLVTKGTNEPY 428 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL--V 482 R+ TSRAEYR+ LR DNAD RL + K+G + Q+R+ K++++ + + + L + Sbjct: 429 RLLTSRAEYRLLLRHDNADLRLLELAYKIGMV---PQERYEKFVEKKALIDNEIARLREI 485 Query: 483 LTSKNLSSTSISFKQDGKTRT-----AYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 + N +T + + G + + L P+ + + S+ P +F+ + E+++ Sbjct: 486 IIKPN-EATQVVIRSAGGSELKDGIRGADLLKRPEMHYEMISSLIPADIEFTEEIKEQIE 544 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ Y Y + +++ +++ E + IP++ DY ++ L+ E ++KL + P ++ QAS+ Sbjct: 545 IQLKYEGYIEKALLQVEKLHKMENKKIPENIDYDAISGLATEARQKLKQVTPLSIAQASR 604 Query: 598 IEGMTPAALNLLLIYIKKNTV 618 I G+ PA +++LL+YI++ + Sbjct: 605 ISGVNPADISILLVYIEQGKI 625 >gi|121996812|ref|YP_001001599.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Halorhodospira halophila SL1] gi|189039344|sp|A1WSY5|MNMG_HALHL RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|121588217|gb|ABM60797.1| glucose inhibited division protein A [Halorhodospira halophila SL1] Length = 633 Score = 533 bits (1372), Expect = e-149, Method: Compositional matrix adjust. Identities = 289/622 (46%), Positives = 403/622 (64%), Gaps = 10/622 (1%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M +DVIVIGGGHAG EAAA AA+LG ST LITH TIG++SCNPAIGG+GKGHLVR Sbjct: 1 MNTNRFDVIVIGGGHAGTEAAAAAARLGRSTLLITHNLETIGALSCNPAIGGIGKGHLVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G+MGR+ADA+ I RVLN +KGPAVR R QADR Y A +R + + L ++ Sbjct: 61 EIDALGGVMGRLADASAIHARVLNQRKGPAVRATRIQADRPTYARAARRALDALPGLALL 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q + + + + VV+T GTFL G IHIG ++ AGR GD ++ Sbjct: 121 QDAAEELLVADQRCYGVRTESGATLHADAVVVTAGTFLAGQIHIGHVQHSAGRAGDPAAD 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFS-FMTDKITNRQIE 239 L S RLKTGTP R+D +T+ ++ + Q D FS F + + Sbjct: 181 RLSASLRDLGLAVHRLKTGTPPRIDRRTVAVEQLDAQHGDTPRPLFSPFRPPEAPLPEAA 240 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C I+ T ETHRII + + HS +YSG I+S GPRYCPSIEDK+VRF +R+ HQ+FLEPEG Sbjct: 241 CLISWTTPETHRIIRDALDHSPMYSGAIQSSGPRYCPSIEDKVVRFADRDHHQVFLEPEG 300 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L+ +YPNG+ST LP +Q IR++PGLE I RPGYAIEYDY++P+ L P LE+ Sbjct: 301 LDATELYPNGVSTGLPFTVQEALIRSMPGLEAARITRPGYAIEYDYLDPRGLTPWLESAT 360 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I+GL+LAGQINGTTGYEEAAAQGL+AG+N+AR S D +R ++YIGV+IDDL + G Sbjct: 361 IAGLYLAGQINGTTGYEEAAAQGLIAGLNAARVSAGEDPWFPTREEAYIGVLIDDLVTTG 420 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 V EPYRMFTSRAE+R+ LR DNA++RLT +G +LG +G+ + RFA+Y N R+ L Sbjct: 421 VTEPYRMFTSRAEHRLRLRDDNAEDRLTEVGRRLGSVGDDQWTRFARYRDALNAERARLN 480 Query: 480 SL-----VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNL-FSICPDARKFSSLVI 533 LT+ + + ++D +T ++ L P+ S ++ F + + Sbjct: 481 GTRVHPGRLTASQQARLGGALRRD---QTLFDLLRRPELSYDDVRFIGGLEEADLPVRAV 537 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 ++L+IE+ Y Y RQ +E + + + +P+ DY+++ LS E++E+L+ ++P + Sbjct: 538 QQLEIEARYDGYVERQELENQRHQRYAQVRLPEALDYAAIDGLSTEVRERLTRMRPATVG 597 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QA+++ G+TPAA++LLLI++++ Sbjct: 598 QAARLPGVTPAAISLLLIHLRR 619 >gi|261378094|ref|ZP_05982667.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria cinerea ATCC 14685] gi|269145545|gb|EEZ71963.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria cinerea ATCC 14685] Length = 631 Score = 533 bits (1372), Expect = e-149, Method: Compositional matrix adjust. Identities = 291/621 (46%), Positives = 392/621 (63%), Gaps = 12/621 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 8 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 67 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY+ A++ + +QENLD+ Q Sbjct: 68 ALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKAAIREMLENQENLDLFQQA 127 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + + IS +V + VVLT GTFL G IHIG GR GD + SL Sbjct: 128 VEDVTLDGDRISGVVTAMGVEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 187 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT----DKITNRQIE 239 + + GRLKTGTP R+DG+TI + + KQ D P M+ ++ RQ+ Sbjct: 188 GRLRELNLPQGRLKTGTPPRIDGRTIDFSQLTKQPGD---TPVPVMSVRGNAEMHPRQVS 244 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TNL+TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEG Sbjct: 245 CWITHTNLQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEG 304 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 305 LTTHEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKT 364 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG N+ + D + R +Y+GV++DDL +KG Sbjct: 365 IQGLFFAGQINGTTGYEEAAAQGLLAGANAVQYVRGQDPLLLRREQAYLGVLVDDLITKG 424 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 V EPYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + + LK Sbjct: 425 VNEPYRMFTSRAEYRLQLREDNADMRLTEDGYKIGLVGEEQWRMFNEKREAIEREIQRLK 484 Query: 480 SLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI--CPDARKFSSLVIE 534 + T + L+ + ++ + ++ L P+ L ++ + S+ VIE Sbjct: 485 TTWYTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGARSSENLSAEVIE 544 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E + E +P+D DYS + LS E+++KL+ KP + Q Sbjct: 545 QVEIQVKYQGYIDRQNEEIDSRRDIETLKLPEDIDYSKVKGLSAEVQQKLNQHKPETVGQ 604 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G+TPAA+ LL++++K+ Sbjct: 605 ASRISGVTPAAVALLMVHLKR 625 >gi|71898003|ref|ZP_00680208.1| Glucose-inhibited division protein A subfamily [Xylella fastidiosa Ann-1] gi|71732247|gb|EAO34302.1| Glucose-inhibited division protein A subfamily [Xylella fastidiosa Ann-1] Length = 629 Score = 533 bits (1372), Expect = e-149, Method: Compositional matrix adjust. Identities = 291/617 (47%), Positives = 382/617 (61%), Gaps = 9/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAG EAA AA+ GA T L+TH TIG+MSCNPAIGG+GKGHLV+EIDAL Sbjct: 8 YDVIVIGAGHAGSEAALAAARTGAHTLLLTHNIETIGAMSCNPAIGGIGKGHLVKEIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M ADAAGIQ+R LN KGPAVR R QADR LYR A+++ I Q L++ Q EV Sbjct: 68 GGAMAHAADAAGIQWRTLNASKGPAVRATRCQADRSLYRAAIRQMIEGQARLNIFQAEVD 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + + VVLT GTFL G IHIG + AGRMGD P+ L Sbjct: 128 DLLFEGDTVCGAITHTGLHFKAPAVVLTAGTFLAGKIHIGPTQYAAGRMGDPPATMLAAR 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + F RLKTGTP R+DG+T+ + ++Q D SF+ + ++ Q+ C IT+ Sbjct: 188 LRERLFTVARLKTGTPPRIDGRTLNYTAMQEQPGDAPRPTMSFIGNSASHPPQVSCWITQ 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T TH II + S +YSG I+ GPRYCPSIEDK+VRF E+N HQIF+EPEGLN Sbjct: 248 TTERTHEIIRAALHRSPLYSGQIEGTGPRYCPSIEDKVVRFAEKNSHQIFVEPEGLNVID 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q + +R+I G E+ +I RPGYAIEYD+ +P+ L +LETK I+GLF Sbjct: 308 IYPNGISTSLPFDVQLELVRSIRGFEQAHITRPGYAIEYDFFDPRGLKASLETKAITGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR L R +Y+GV++DDL + G EPY Sbjct: 368 FAGQINGTTGYEEAAAQGLLAGLNAARHVRGLSSWTPRRDQAYLGVLVDDLITHGTNEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG LG + + R F + L +L T Sbjct: 428 RMFTSRAEYRLQLREDNADARLTAIGRDLGLVDDARWAHFNAKQEAVARECGRLSALWAT 487 Query: 485 SKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLF---SICPDARKFSSLVIERLQI 538 N + + + + P+ L S+ P + V E+++I Sbjct: 488 PGNALGREVKETLGVTLSRETNIIDLMKRPELDYAALMRVPSLGPGVD--DAQVAEQVEI 545 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 YA Y RQ E + E IP +FDY+++ LS E+ +KL ++P + QA +I Sbjct: 546 SVKYAGYLNRQSEEITRQQRHEATAIPLEFDYAAVRGLSTEVLQKLQHIQPQTVGQAQRI 605 Query: 599 EGMTPAALNLLLIYIKK 615 GMTPAA++LLL+++++ Sbjct: 606 PGMTPAAISLLLVHLER 622 >gi|229917462|ref|YP_002886108.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Exiguobacterium sp. AT1b] gi|229468891|gb|ACQ70663.1| glucose inhibited division protein A [Exiguobacterium sp. AT1b] Length = 628 Score = 533 bits (1372), Expect = e-149, Method: Compositional matrix adjust. Identities = 279/614 (45%), Positives = 386/614 (62%), Gaps = 4/614 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIG GHAG EAA +A++GA TA++T +G M CNP+IGG KG +VREIDAL Sbjct: 8 FDVIVIGAGHAGIEAALASARMGAKTAMLTMNPDMVGFMYCNPSIGGPAKGIVVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MGR DA IQ ++LN KGPAVR R QAD+ Y+ M++ + + NL + Q V Sbjct: 68 GGEMGRAIDATYIQMKMLNTSKGPAVRALRAQADKFQYQNHMKKVLEDEPNLLLRQALVE 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + +V S R V++TTGTF+RG I IG+L +G PS L Sbjct: 128 RLLIEDGEVRGVVTNTGSEYRAKAVIVTTGTFMRGQIIIGELAYESGPNNQMPSVELSKH 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQIECGITR 244 + D R KTGTP R+DGKTI + KTE Q DE FS+ TD QI C +T Sbjct: 188 LEELGLDLVRFKTGTPPRIDGKTIDYSKTEIQPGDENPSFFSYTSTDLNPIEQIPCWLTY 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ TH++I EN+ S +YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG +T+ Sbjct: 248 TSERTHQLIDENLHRSPMYSGAIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRDTEE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G ST++PE++QHQ +RTIPGLE ++RPGYAIEYD + P +L+PTLETK + GLF Sbjct: 308 IYVQGFSTSMPEDVQHQMLRTIPGLENSEMMRPGYAIEYDAVVPTQLWPTLETKAVPGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QG++AGIN+A K D + R+ +YIGV+IDDL +KG EPY Sbjct: 368 TAGQINGTSGYEEAAGQGIMAGINAACKVLGKDPVILDRSQAYIGVLIDDLVTKGTNEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RL+ IG ++G + E R + L SLV+ Sbjct: 428 RLLTSRAEYRLLLRHDNADLRLSDIGYEIGLLSEDRHTHLNEKRVAIEKEVKRLASLVVK 487 Query: 485 SK---NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 N S+ + A L P+ S + L ++ P + S V E+++I+ Sbjct: 488 PTPEVNAMLESVGAHPLKEATHANILLKRPEVSYEALMTVVPSTEELSYEVKEQVEIQVK 547 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y +Q+ + ++++ E++ IP++ DY ++ L+ E K+KL ++P ++ QAS+I G+ Sbjct: 548 YEGYISKQLEQVEKMRRMEEKRIPENLDYDAIGGLATEAKQKLKQVRPLSIGQASRISGV 607 Query: 602 TPAALNLLLIYIKK 615 PA +++LL+YI++ Sbjct: 608 NPADVSILLVYIEQ 621 >gi|254483151|ref|ZP_05096384.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [marine gamma proteobacterium HTCC2148] gi|214036522|gb|EEB77196.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [marine gamma proteobacterium HTCC2148] Length = 643 Score = 532 bits (1371), Expect = e-149, Method: Compositional matrix adjust. Identities = 284/619 (45%), Positives = 387/619 (62%), Gaps = 9/619 (1%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 + +DVIVIGGGHAG EA +A++G T L+TH T+G MSCNPAIGG+GK HLV+E+ Sbjct: 12 KQQFDVIVIGGGHAGTEACLASARMGCRTLLLTHSVDTLGQMSCNPAIGGIGKSHLVKEV 71 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G MGR D AGIQFRVLN +KGPAVR R QADR LYR A+++ + QENL + Q Sbjct: 72 DALGGAMGRATDLAGIQFRVLNSRKGPAVRATRAQADRVLYRNAIRQMLEGQENLSIFQQ 131 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 V E ++ + Q + R VVLTTGTFL G +HIG GR GD PS +L Sbjct: 132 PVDDLLIESGVVVGAITQMGVVFRAPRVVLTTGTFLGGKLHIGMENSAGGRAGDPPSIAL 191 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM--TDKITNRQIEC 240 + F RLKTGTP R+D +++ + + ++Q+ DE L SFM D+ ++ C Sbjct: 192 AQRLRELPFRVERLKTGTPPRIDARSVDFSELDEQWGDEPLPVMSFMGSVDEHPEQRC-C 250 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN TH II + S ++SG I+ GPRYCPS+EDKI RF ++N HQ+F+EPEGL Sbjct: 251 WITHTNERTHDIIRAGLDRSPMFSGVIEGTGPRYCPSVEDKIHRFADKNSHQVFIEPEGL 310 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + +YPNGIST+LP ++Q + +I G E +I RPGYAIEYD+ +P++L +LETK + Sbjct: 311 TSPELYPNGISTSLPFDVQIDLVHSIKGFENAHITRPGYAIEYDFFDPRDLQSSLETKAL 370 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GL+ AGQINGTTGYEEAAAQGL+AG+N+A C R ++YIGV++DDL + G Sbjct: 371 PGLYFAGQINGTTGYEEAAAQGLLAGLNAALAVKGEQAWCPRRDEAYIGVLVDDLITMGT 430 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 +EPYRMFTSRAE+R+ LR DNAD RLT G +LG +G+ R +RF + L S Sbjct: 431 MEPYRMFTSRAEHRLLLREDNADLRLTGKGRELGLVGDARWQRFEQKSDAIVSEAERLGS 490 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSICPDARKFSSL-VIERL 536 L + + ++ K Y + L P+ ++ + + L E++ Sbjct: 491 TWLQPGSAEAEKLADKLTSPLAREYSLADLLKRPELDYADIAGL--KGEPTTDLQAAEQV 548 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 I++ YA Y RQ + ++ E +P D DY + LSNE+K+KL +P L +A Sbjct: 549 AIQAKYAGYIDRQQGDIDRLRRYENAALPADLDYEQVDGLSNEVKQKLGEGRPDTLARAG 608 Query: 597 KIEGMTPAALNLLLIYIKK 615 +I G+TPAA++LLLIY+KK Sbjct: 609 RIPGVTPAAVSLLLIYLKK 627 >gi|298370285|ref|ZP_06981601.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria sp. oral taxon 014 str. F0314] gi|298281745|gb|EFI23234.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria sp. oral taxon 014 str. F0314] Length = 634 Score = 532 bits (1371), Expect = e-149, Method: Compositional matrix adjust. Identities = 288/618 (46%), Positives = 393/618 (63%), Gaps = 6/618 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 11 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 70 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY+ A++ + +QENLD+ Q Sbjct: 71 ALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKAAIREMLENQENLDLFQQS 130 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + + IS ++ + VVLT GTFL G IHIG GR GD + SL Sbjct: 131 VDDVTLDGDRISGVITAMGVEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 190 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + + GRLKTGTP R+DG+TI + + +Q D + FS + ++ RQ+ C I Sbjct: 191 GRLRELNLPQGRLKTGTPPRIDGRTIDFSQLTEQPGDTPVPVFSVRGNAEMHPRQVSCWI 250 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TNL+TH II S +++G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T Sbjct: 251 THTNLKTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFAAKDSHQIFLEPEGLTT 310 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK + G Sbjct: 311 NEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKTVQG 370 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AG N+ + + D + R +Y+GV++DDL +KGV E Sbjct: 371 LFFAGQINGTTGYEEAAAQGLLAGANAVQYVREQDPLLLRREQAYLGVLVDDLITKGVNE 430 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + + LK+ Sbjct: 431 PYRMFTSRAEYRLQLREDNADMRLTEDGHKIGLVGEEQWRMFNEKREAIEREIQRLKTTW 490 Query: 483 LTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI--CPDARKFSSLVIERLQ 537 T + L+ + ++ + ++ L P+ L ++ + S+ VIE+++ Sbjct: 491 YTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGARSSENLSAEVIEQVE 550 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ Y Y RQ E + E +P D DYS + LS E+++KL+ KP + QAS+ Sbjct: 551 IQVKYQGYIDRQNEEIDSRRDIETLKLPDDIDYSKVKGLSAEVQQKLNQHKPETVGQASR 610 Query: 598 IEGMTPAALNLLLIYIKK 615 I G+TPAA+ LL++++K+ Sbjct: 611 ISGVTPAAVALLMVHLKR 628 >gi|83746959|ref|ZP_00944005.1| Putative tRNA (5-carboxymethylaminomethyl-2-thiouridylate) synthase subunit GidA [Ralstonia solanacearum UW551] gi|207744823|ref|YP_002261215.1| trna uridine 5-carboxymethylaminomethyl modification enzyme gida(glucose-inhibited division protein a) [Ralstonia solanacearum IPO1609] gi|83726379|gb|EAP73511.1| Putative tRNA (5-carboxymethylaminomethyl-2-thiouridylate) synthase subunit GidA [Ralstonia solanacearum UW551] gi|206596233|emb|CAQ63160.1| trna uridine 5-carboxymethylaminomethyl modification enzyme gida(glucose-inhibited division protein a) [Ralstonia solanacearum IPO1609] Length = 647 Score = 532 bits (1371), Expect = e-149, Method: Compositional matrix adjust. Identities = 285/629 (45%), Positives = 387/629 (61%), Gaps = 15/629 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALAAARMGCQTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 67 GGAMALATDEGGIQFRILNSSKGPAVRATRAQADRVLYKAAIRHRLENQPNLMLFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 127 DLLVEGDRVVGAVTQVGVRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFM-TDKITNRQIECGIT 243 + GRLKTGTP R+DG+TI + E+Q D +P FSF+ + RQ+ C +T Sbjct: 187 LKELKLPQGRLKTGTPPRIDGRTIDFSVLEEQPGDLDPVPVFSFLGRADMHPRQVPCWVT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T+ Sbjct: 247 HTNEHTHDIIRAGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNG+ST+LP ++Q I ++ GLE +I+RPGYAIEYDY +P+ L +LE+K I+GL Sbjct: 307 EFYPNGVSTSLPFDVQLDLIHSMRGLENAHILRPGYAIEYDYFDPRGLKASLESKAIAGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ + + R +Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGINAGLQVQGKEAWTPRRDQAYLGVLVDDLVTRGVTEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R+SLR DNAD RLT G LG + + R F + + LKS + Sbjct: 427 YRMFTSRAEFRLSLREDNADMRLTEAGRSLGVVDDARWDAFNRKRDAVSRETERLKSTWV 486 Query: 484 TSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI-----CPDA-----RKFSS 530 L + + K + + + L P+ + ++L + P+A + Sbjct: 487 NPAILPAADAEPVLGKGIEREYSLADLLRRPNVTYESLMGMQGGKYAPEAPLDDEPLLAE 546 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 + E+++I Y Y RQ E + + E +P DFDY + LS E+++KL+ KP Sbjct: 547 QIREQIEIGIKYHGYIARQADEVERLGASENTRLPADFDYKQVRGLSIEVQQKLAQHKPE 606 Query: 591 NLLQASKIEGMTPAALNLLLIYIKKNTVK 619 + QAS+I G+TPAA++LLL+++KK ++ Sbjct: 607 TIGQASRISGITPAAVSLLLVHLKKGVLR 635 >gi|326484523|gb|EGE08533.1| mitochondrial translation optimization protein [Trichophyton equinum CBS 127.97] Length = 693 Score = 532 bits (1371), Expect = e-149, Method: Compositional matrix adjust. Identities = 288/633 (45%), Positives = 392/633 (61%), Gaps = 23/633 (3%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R YDVIV+GGGHAG EA A AA+ GA TAL+T S IG SCNP+ GG+GKG ++REID Sbjct: 35 RPYDVIVVGGGHAGSEACAAAARSGARTALVTPSRSDIGVCSCNPSFGGIGKGTMIREID 94 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDG+ GR D AGIQFR+LN KGPAV GPR Q DR LY+ M E+ + L +++G+ Sbjct: 95 ALDGVAGRTVDKAGIQFRILNRSKGPAVWGPRAQIDRALYKKYMLEELTNTPGLSIVEGK 154 Query: 124 VA----------GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGR 173 VA N + I + ++ +I V++TTGTFL G IHIG P+GR Sbjct: 155 VADIVISKENKTSLNGSQGEIVGVRLESGEVIPTGKVIITTGTFLGGEIHIGLDVFPSGR 214 Query: 174 MGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI 233 MG++ + L S + F GRLKTGTP RLD KTI + E Q D PFS++ D + Sbjct: 215 MGEAATFGLSKSLREAGFQLGRLKTGTPPRLDRKTIDFSTLEVQPGDSPPSPFSYLNDSV 274 Query: 234 T---NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNG 290 Q+ C TN +H ++ EN+ S + GPRYCPS+E KI+RF + Sbjct: 275 QIGDKGQLNCWAAHTNEASHAVVRENLNKSIHIRETVN--GPRYCPSLESKIIRFKNKPR 332 Query: 291 HQIFLEPEGLN-TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPK 349 H I+LEPEGL DV+YPNGIS +P + Q + +RT+ GLE V +++PGY +EYDY++P+ Sbjct: 333 HMIWLEPEGLAPNDVIYPNGISMTIPADAQEKMLRTVRGLENVTMLQPGYGVEYDYVDPR 392 Query: 350 ELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIG 409 L PTLETK ISGL+LAGQINGTTGYEEAAAQG++AGIN+ S + SR D +IG Sbjct: 393 SLRPTLETKLISGLYLAGQINGTTGYEEAAAQGIIAGINAGLASQSKPPMTLSRADGFIG 452 Query: 410 VMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQ 469 +MIDDL +KGV EPYRMFT+R+EYRIS R DNAD RLT G G + + R ++F + + Sbjct: 453 IMIDDLITKGVSEPYRMFTTRSEYRISTRSDNADLRLTAKGRAAGVVSDERWRQFNETKE 512 Query: 470 EYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSY----PDFSIQNLFSICPDA 525 + ++L++LL++ S + + D R+A+E LS+ PD I ++ S Sbjct: 513 QMSYLQALLENTKHPSTVWARKGFPVRTDSSVRSAFELLSHNGVSPDDVIPHIESAPGTI 572 Query: 526 RKFSSLVIE---RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKE 582 SS E R+ IE YA YT RQ A + +E L+P D DYS++ LS E ++ Sbjct: 573 HSLSSFSPEIKSRMAIEGRYAPYTKRQEATALLFERDEGMLLPPDIDYSTMLGLSTEERQ 632 Query: 583 KLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 L ++P ++ A ++EG+TP LL++++K Sbjct: 633 VLEKVRPVSIGMARRVEGVTPVGALKLLMHVRK 665 >gi|261380643|ref|ZP_05985216.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria subflava NJ9703] gi|284796623|gb|EFC51970.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria subflava NJ9703] Length = 631 Score = 532 bits (1371), Expect = e-149, Method: Compositional matrix adjust. Identities = 291/622 (46%), Positives = 395/622 (63%), Gaps = 14/622 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L++H T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 8 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLSHNIETLGQMSCNPSIGGIGKGHLVRELD 67 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY+ A++ + +QENLD+ Q Sbjct: 68 ALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKAAIREMLENQENLDLFQQA 127 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + IS +V + VVLT GTFL G IHIG GR GD + SL Sbjct: 128 VEDVTLDGERISGVVTAMGVEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 187 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK----ITNRQIE 239 + + GRLKTGTP R+DG+TI + + +Q D P M+ + + RQ+ Sbjct: 188 GRLRELNLPQGRLKTGTPPRIDGRTIDFSQLTEQPGD---TPVPVMSVRGSADMHPRQVS 244 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TNL+TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEG Sbjct: 245 CWITHTNLKTHEIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEG 304 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 305 LTTHEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKT 364 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG N+ + + D + R +Y+GV++DDL +KG Sbjct: 365 IQGLFFAGQINGTTGYEEAAAQGLLAGANAVQYVREQDPLLLRREQAYLGVLVDDLITKG 424 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 V EPYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + + LK Sbjct: 425 VNEPYRMFTSRAEYRLQLREDNADMRLTEDGYKIGLVGEEQWRMFNEKREAIEREIQRLK 484 Query: 480 SLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL---VI 533 + T + L+ + ++ + ++ L P+ L ++ PDA+ ++L V+ Sbjct: 485 TTWYTPQKLAEEEQLRVFGQKLSREANLHDLLRRPNLDYATLMTL-PDAQPETALADSVV 543 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I+ Y Y RQ E + E +P D DYS + LS E+++KL+ KP + Sbjct: 544 EQVEIQVKYQGYIDRQNEEIDSRRDIETLKLPDDIDYSKVKGLSAEVQQKLNQHKPETVG 603 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I G+TPAA+ LL++++K+ Sbjct: 604 QASRISGVTPAAVALLMVHLKR 625 >gi|145301183|ref|YP_001144024.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Aeromonas salmonicida subsp. salmonicida A449] gi|166222904|sp|A4STQ4|MNMG_AERS4 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|142853955|gb|ABO92276.1| glucose inhibited division protein A [Aeromonas salmonicida subsp. salmonicida A449] Length = 629 Score = 532 bits (1371), Expect = e-149, Method: Compositional matrix adjust. Identities = 280/619 (45%), Positives = 392/619 (63%), Gaps = 5/619 (0%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 + +DVIV+GGGHAG EAA AA++G +T L+TH T+G MSCNPAIGG+GKGHLV+E+ Sbjct: 4 HEQFDVIVVGGGHAGTEAATAAARMGLNTLLLTHNIDTLGHMSCNPAIGGIGKGHLVKEV 63 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G+M R D AGIQFR LN KGPAVR R QADR LY+ +++ + + NL + Q Sbjct: 64 DALGGIMARATDLAGIQFRTLNSSKGPAVRATRAQADRLLYKAVVRQMLENYPNLKIFQQ 123 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 + + ++ +V Q I TVVLT GTFL G+IHIG GR GD PS +L Sbjct: 124 ACDDLIMDGDRVAGVVTQSGIRISGKTVVLTVGTFLNGLIHIGMENYKGGRAGDPPSIAL 183 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECG 241 + RLKTGTP R+D +++ + Q+ D+ FSF+ D + RQ+ C Sbjct: 184 AQRLREMPLRIDRLKTGTPPRIDARSVDLSVMQAQYGDDPRPVFSFIGDASQHPRQVPCY 243 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN TH +I N+ S +Y+G I+ GPRYCPSIEDKI RF ++ HQIF+EPEGL Sbjct: 244 VTHTNERTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKITRFADKTAHQIFVEPEGLT 303 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T +YPNGIST+LP ++Q Q +R+I G E +I RPGYAIEYD+ +P++L +E+K I Sbjct: 304 THELYPNGISTSLPFDVQVQIVRSIRGFENAHITRPGYAIEYDFFDPRDLKANMESKYIG 363 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 LF AGQINGTTGYEEAAAQGL+AG+N+ ++ D R +Y+GVMIDDL++ G Sbjct: 364 NLFFAGQINGTTGYEEAAAQGLMAGLNAGLRAQDKDPWHPRRDQAYMGVMIDDLSTLGTR 423 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+ LR DNAD RLT IG +LG + + R +F +++ R ++S Sbjct: 424 EPYRMFTSRAEYRLLLREDNADLRLTAIGRELGLVDDERWGKFNIKMEQVELERQRMRST 483 Query: 482 VLTSKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQ 537 + ++ S +++ + + + E L P+ + L +I S ++++ Sbjct: 484 WIHPQHPSLEAVNALVNTPLTREQNLEELLRRPEVTYDALMAIEGVGPALSDHAAADQVE 543 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ YA Y RQ E ++ E L+P D +Y + LSNE+ KL+ KP + QAS+ Sbjct: 544 IQIKYAGYIERQYDEVEKQLRNENTLLPLDMNYRDVNGLSNEVIAKLNDAKPETIGQASR 603 Query: 598 IEGMTPAALNLLLIYIKKN 616 I G+TPAA+++LL+++KK+ Sbjct: 604 ISGITPAAISILLVHLKKH 622 >gi|17548045|ref|NP_521447.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ralstonia solanacearum GMI1000] gi|21263662|sp|Q8XU65|MNMG_RALSO RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|17430351|emb|CAD17116.1| probable trna uridine 5-carboxymethylaminomethyl modification enzyme gida(glucose-inhibited division protein a) [Ralstonia solanacearum GMI1000] Length = 647 Score = 532 bits (1371), Expect = e-149, Method: Compositional matrix adjust. Identities = 288/630 (45%), Positives = 386/630 (61%), Gaps = 17/630 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALAAARMGCQTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 67 GGAMALATDEGGIQFRILNSSKGPAVRATRAQADRVLYKAAIRHRLENQPNLMLFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 127 DLLVEGDRVVGAVTQVGVRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFM--TDKITNRQIECGI 242 + GRLKTGTP R+DG+TI + E Q D +P FSF+ TD + RQ+ C + Sbjct: 187 LKELKLPQGRLKTGTPPRIDGRTIDFSVLEAQPGDLDPVPVFSFLGRTD-MHPRQVPCWV 245 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T Sbjct: 246 THTNERTHDIIRAGLNRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLTT 305 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + YPNG+ST+LP ++Q I ++ GLE +I+RPGYAIEYDY +P+ L +LE+K I G Sbjct: 306 NEFYPNGVSTSLPFDVQLDLIHSMRGLEHAHILRPGYAIEYDYFDPRGLKASLESKAIGG 365 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AGIN+ + R +Y+GV++DDL ++GV E Sbjct: 366 LFFAGQINGTTGYEEAAAQGLLAGINAGLQVQGKAAWTPRRDQAYLGVLVDDLITRGVTE 425 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAE+R+SLR DNAD RLT G LG + + R F + + LKS Sbjct: 426 PYRMFTSRAEFRLSLREDNADMRLTEAGRDLGVVDDARWDAFNRKRDAVSRETERLKSTW 485 Query: 483 LTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI-----CPDA-----RKFS 529 + L + + K + + + L P+ + ++L + PDA + Sbjct: 486 VNPAILPAADAEPVLGKGIEREYSLADLLRRPNVTYESLMGMQGGKYAPDAPLADEPLLA 545 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 + E+++I Y Y RQ E + + E +P DFDY + LS E+++KL+ KP Sbjct: 546 EQIREQIEIGIKYHGYIARQADEVERLGANENTRLPADFDYKQVRGLSIEVQQKLAQHKP 605 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 + QAS+I G+TPAA++LLL+++KK ++ Sbjct: 606 ETIGQASRISGITPAAVSLLLVHLKKGVLR 635 >gi|328699223|ref|XP_001949953.2| PREDICTED: protein MTO1 homolog, mitochondrial-like isoform 1 [Acyrthosiphon pisum] Length = 657 Score = 532 bits (1370), Expect = e-149, Method: Compositional matrix adjust. Identities = 279/634 (44%), Positives = 416/634 (65%), Gaps = 21/634 (3%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 ++ YDVIV+GGGHAG EA + AA++GAST L+THK S++G MSCNP+ GG+GKGHL+REI Sbjct: 28 SKQYDVIVVGGGHAGTEACSAAARMGASTLLVTHKKSSVGEMSCNPSFGGIGKGHLMREI 87 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQE-NLDVIQ 121 DALDGL ++ D +GI +++LN +KGPAV G R Q DR+LY++ MQ E+ NL++I+ Sbjct: 88 DALDGLCAKICDLSGIHYKILNRRKGPAVWGLRAQVDRKLYKMYMQAELFENTPNLNIIE 147 Query: 122 GEVAGFNTEKN-IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 G V + N + +++++ ++IR V+LTTGTFL G ++ G P GR+ PS Sbjct: 148 GSVDNILLDNNNQCTGVLLENGTLIRTKCVILTTGTFLNGEMYSGMTVKPGGRINSKPSI 207 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR---Q 237 L N+ + F+TGR+KTGTP R++ ++I + Q D+ PFSFM + + + Q Sbjct: 208 GLANTLKRLGFNTGRMKTGTPPRIEKQSINFTNLNYQSGDDLPTPFSFMNNSVWLKPEDQ 267 Query: 238 IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 I+ +T TN + H+I+++N+ + ++K GPRYCPS+E K ++F +R+ HQI+LE Sbjct: 268 IKSYLTYTNSKVHQIVIDNLSVNRHIKEEVK--GPRYCPSLESKSLKFRDRH-HQIWLEI 324 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EG +++VVYPNG+S LPE++Q + IR+I GLE GY +EYDY++P+EL+PTLET Sbjct: 325 EGFDSNVVYPNGLSCTLPEDLQVKMIRSINGLENAQHYISGYGVEYDYVDPRELYPTLET 384 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 KKI LF AGQINGTTGYEEAAAQG++AGIN+ S + + SRT++YIGV++DDLT+ Sbjct: 385 KKIGHLFFAGQINGTTGYEEAAAQGILAGINAGASSLNRNSLTLSRTEAYIGVLVDDLTT 444 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL 477 +G EPYRMFT RAE+R+ LRPDNAD RLT G +GC+ + R+ + + + L Sbjct: 445 QGTDEPYRMFTGRAEFRLHLRPDNADIRLTQKGYDIGCVS---KTRYDQTLSIRSSLEEG 501 Query: 478 LKSLVLTSKNL----SSTSISFKQDGKTRTAYEF--LSYPDFSIQNLFSICPD--ARKFS 529 +K L S+ + S + ++ +T+TA+E LS +++ L I PD +F Sbjct: 502 IKLLTSVSQTMYKWKKSLGLKTSRNPETKTAFEILGLSNEGITLRQLEMILPDNFGGQFE 561 Query: 530 SLVI-ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLP-ALSNELKEKLSIL 587 I ERL+IE+ Y A T Q + + ++ ++ L+PKD DY+ ++S E EKLS + Sbjct: 562 DNRIRERLKIEALYQASTYDQQEDIERVEVDQSLLLPKDIDYTHTSLSISKEEIEKLSYI 621 Query: 588 KPFNLLQASKIEGMTPAALNLLLIYIKKNTVKLN 621 +P + A +I G+ P+ + LL YIK + ++ Sbjct: 622 QPQTIGAAGRIPGIKPSTVLRLLYYIKNQKINIS 655 >gi|71276642|ref|ZP_00652914.1| Glucose-inhibited division protein A subfamily [Xylella fastidiosa Dixon] gi|71900051|ref|ZP_00682195.1| Glucose-inhibited division protein A subfamily [Xylella fastidiosa Ann-1] gi|170730097|ref|YP_001775530.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Xylella fastidiosa M12] gi|71162569|gb|EAO12299.1| Glucose-inhibited division protein A subfamily [Xylella fastidiosa Dixon] gi|71730194|gb|EAO32281.1| Glucose-inhibited division protein A subfamily [Xylella fastidiosa Ann-1] gi|167964890|gb|ACA11900.1| glucose inhibited division protein A [Xylella fastidiosa M12] Length = 629 Score = 532 bits (1370), Expect = e-149, Method: Compositional matrix adjust. Identities = 291/617 (47%), Positives = 381/617 (61%), Gaps = 9/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAG EAA AA+ GA T L+TH TIG+MSCNPAIGG+GKGHLV+EIDAL Sbjct: 8 YDVIVIGAGHAGSEAALAAARTGAHTLLLTHNIETIGAMSCNPAIGGIGKGHLVKEIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M ADAAGIQ+R LN KGPAVR R QADR LYR A+++ I Q L++ Q EV Sbjct: 68 GGAMAHAADAAGIQWRTLNASKGPAVRATRCQADRSLYRAAIRQMIEGQARLNIFQAEVD 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + + VVLT GTFL G IHIG + AGRMGD P+ L Sbjct: 128 DLLFEGDTVCGAITHTGLHFKAPAVVLTAGTFLAGKIHIGPTQYAAGRMGDPPATMLAAR 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + F RLKTGTP R+DG+T+ + ++Q D SF+ + ++ Q+ C IT+ Sbjct: 188 LRERLFTVARLKTGTPPRIDGRTLNYTAMQEQPGDAPRPTMSFIRNSASHPSQVSCWITQ 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T TH II + S +YSG I+ GPRYCPSIEDK+VRF E+N HQIF+EPEGLN Sbjct: 248 TTERTHEIIRAALHRSPLYSGQIEGTGPRYCPSIEDKVVRFAEKNSHQIFVEPEGLNVID 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q +R+I G E+ +I RPGYAIEYD+ +P+ L +LETK I+GLF Sbjct: 308 IYPNGISTSLPFDVQLDLVRSIRGFEQAHITRPGYAIEYDFFDPRGLKASLETKAIAGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR L R +Y+GV++DDL + G EPY Sbjct: 368 FAGQINGTTGYEEAAAQGLLAGLNAARHVRGLSSWTPRRDQAYLGVLVDDLITHGTNEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG LG + + R F + L +L T Sbjct: 428 RMFTSRAEYRLQLREDNADARLTAIGRDLGLVDDARWAHFNAKQEAVARECRRLSALWAT 487 Query: 485 SKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLF---SICPDARKFSSLVIERLQI 538 N + + + + P+ L S+ P + V E+++I Sbjct: 488 PGNALGREVKETLGVTLSRETNIIDLMKRPELDYAALMRIPSLGPGVD--DAQVAEQVEI 545 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 YA Y RQ E + E IP +FDY+++ LS E+ +KL ++P + QA +I Sbjct: 546 SVKYAGYLNRQSEEITRQQRHEATAIPLEFDYAAVRGLSTEVLQKLQHIQPQTVGQAQRI 605 Query: 599 EGMTPAALNLLLIYIKK 615 GMTPAA++LLL+++++ Sbjct: 606 PGMTPAAISLLLVHLER 622 >gi|258622945|ref|ZP_05717960.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Vibrio mimicus VM573] gi|258584728|gb|EEW09462.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Vibrio mimicus VM573] Length = 631 Score = 532 bits (1370), Expect = e-149, Method: Compositional matrix adjust. Identities = 286/626 (45%), Positives = 385/626 (61%), Gaps = 15/626 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA AA+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHETFDVIVVGGGHAGTEAALAAARTGQRTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRSVLENTPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + I +V Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQAVDDVIVENDHIRGVVTQMGLKFHAKAVVLTVGTFLGGKIHIGLENFAGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D ++ + E Q D FSFM + + RQI Sbjct: 182 ALAHRLRELPFRVDRLKTGTPPRIDANSVDFSVLEAQHGDNPTPVFSFMGKREHHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CYITHTNERTHDVIRANLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTTELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 IHGLFFAGQINGTTGYEEAAAQGLMAGLNASLYSQDKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG + + R RF + I R L+ Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLVDDERWARFNQKIDNMAKERQRLQ 481 Query: 480 SLVLTSKN--------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SS 530 + + L T +S + G+ + L P+ + + L ++ S Sbjct: 482 ETWMNPNSVGVEQLNALLKTPMSREASGE-----DLLRRPEMTYELLTTLPAFTPALEDS 536 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 E+++I+ Y Y RQ E ++ E +P D DY + LSNE+ KLS KP Sbjct: 537 EAAEQVEIQVKYDGYIQRQQDEIEKSLRHEHTKLPIDLDYKQVKGLSNEVVLKLSTTKPE 596 Query: 591 NLLQASKIEGMTPAALNLLLIYIKKN 616 + AS+I G+TPAA+++LL+++KK+ Sbjct: 597 TIGIASRISGITPAAISILLVHLKKH 622 >gi|146297755|ref|YP_001181526.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Caldicellulosiruptor saccharolyticus DSM 8903] gi|166222920|sp|A4XN50|MNMG_CALS8 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|145411331|gb|ABP68335.1| glucose inhibited division protein A [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 626 Score = 532 bits (1370), Expect = e-149, Method: Compositional matrix adjust. Identities = 275/613 (44%), Positives = 388/613 (63%), Gaps = 3/613 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD++V+G GHAGCEAA A+LG T + +IG+M CNP+IGG GKGHLVREIDAL Sbjct: 8 YDIVVVGAGHAGCEAALACARLGLKTIVFAINLDSIGNMPCNPSIGGTGKGHLVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ ADA IQ R+LN KGPAV R Q DR Y+L M+R + SQ NLD+ QGEV Sbjct: 68 GGEMGKAADATAIQVRILNRAKGPAVYSLRAQCDRARYKLYMKRVLESQPNLDIRQGEVC 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E ++ + + ++ R VVL TGTFL G I IG+ G G P+ L S Sbjct: 128 DILVEDGKVTGVKLTTGAIFRAKAVVLATGTFLGGRIIIGETVYDGGPDGMHPAKYLTES 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 K + R KTGTPAR+ +++ + K + Q DE + PFSF + + Q+ C +T T Sbjct: 188 LKKLGIEMMRFKTGTPARVHRRSLDFSKMQIQLGDEVITPFSFEHETLEIEQVPCYLTYT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 ETHRII EN+ + +++G I+ GPRYCPSIEDK+VRF ++ HQ+F+EP G +T+ + Sbjct: 248 TEETHRIIRENLHRAPLFTGLIQGVGPRYCPSIEDKVVRFADKPRHQVFIEPMGRDTEEM 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+S++LPE++Q + R++ GLE V I+RP YAIEYD INP +L TL+ KKI GLF Sbjct: 308 YVQGMSSSLPEDVQIKMYRSVIGLENVQIMRPAYAIEYDCINPLQLEATLQFKKIKGLFS 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGT+GYEEAAAQG++AGIN+A + + R+ +YIGV+IDDL +KG EPYR Sbjct: 368 AGQINGTSGYEEAAAQGIIAGINAAMYVKGKEMLVLDRSQAYIGVLIDDLVTKGTNEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEY-NFLRSLLKSLVLT 484 + TSRAEYR+ LR DNAD RLT IG ++G I + R ++F K + + + L K+++ Sbjct: 428 IMTSRAEYRLILRQDNADLRLTEIGYRIGLISQERYEKFLKKKKMIEDEIERLKKTVIAP 487 Query: 485 SKNLSSTSISFKQDGKTRTA--YEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSY 542 S ++ I + E L P+ S + L I P V E ++IE Y Sbjct: 488 SDKVNKFLIEHGSSPISTGVKLSELLKRPELSYEALREIDPQRPDLPRSVKEEVEIEIKY 547 Query: 543 AAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMT 602 Y +Q+ + ++ K E + IP+ DY+ + LS E K+KLS ++P ++ QAS+I G++ Sbjct: 548 EGYIKKQLQQIEQFKKLENKKIPEWVDYNQISGLSTEAKQKLSQIRPASIGQASRISGVS 607 Query: 603 PAALNLLLIYIKK 615 PA +++LLI++++ Sbjct: 608 PADISVLLIWLEQ 620 >gi|89100946|ref|ZP_01173793.1| glucose-inhibited division protein A [Bacillus sp. NRRL B-14911] gi|89084355|gb|EAR63509.1| glucose-inhibited division protein A [Bacillus sp. NRRL B-14911] Length = 629 Score = 532 bits (1370), Expect = e-149, Method: Compositional matrix adjust. Identities = 274/619 (44%), Positives = 386/619 (62%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIG GHAG EA A +LGA T ++T + M CNP++GG KG +VREIDA Sbjct: 7 NYDVIVIGAGHAGVEAGLAAGRLGAKTLMVTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ R+LN KGPAVR R QAD+ Y+ M++ I ++ N+ ++QG V Sbjct: 67 LGGEMGKNIDKTHIQMRMLNTGKGPAVRALRAQADKFTYQHEMKKTIENEPNITLLQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + +V + TVV+TTGTFLRG I +G+LK +G PS L Sbjct: 127 EKLIVEDGVCKGVVTMTGAAYSAKTVVITTGTFLRGEIILGELKYSSGPNNQQPSIKLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D+ FS+ T K Q+ C +T Sbjct: 187 HLQELGFDMVRFKTGTPPRVNSHTIDYSKTEIQPGDDVPRAFSYETTKYITDQLPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH +I +N+ S +YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TNETTHSLIDDNLHRSPMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q + +RTIPGLE V ++R GYAIEYD I P +L+PTLETKK+ L+ Sbjct: 307 VYVQGLSTSLPEDVQQKILRTIPGLENVQMMRAGYAIEYDSIVPTQLWPTLETKKVKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+ + + + SR+D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAGLNALGKEELILSRSDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT G K+G I + R RF + Q + L+S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTDAGHKIGLISDERYGRFTEKKQAIEAEKERLRSIII- 485 Query: 485 SKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 K + K G + A + L P+ S +++ P V E+++I+ Sbjct: 486 -KPSAEVQEMIKNQGGSELKDGIRASDLLKRPEMSYEHIKLAAPADADLDFDVTEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + + +K E + +P++ DY ++ L++E ++KL ++P ++ QAS+I Sbjct: 545 LKYEGYIEKSLQQVERLKKMENKKVPENIDYDAINGLASEARQKLKEVRPLSIAQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+Y+++ V Sbjct: 605 GVNPADISILLVYLEQGRV 623 >gi|300702502|ref|YP_003744102.1| glucose-inhibited division protein a, tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Ralstonia solanacearum CFBP2957] gi|299070163|emb|CBJ41454.1| Glucose-inhibited division protein A, tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Ralstonia solanacearum CFBP2957] Length = 647 Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust. Identities = 285/629 (45%), Positives = 387/629 (61%), Gaps = 15/629 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALAAARMGCQTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 67 GGAMALATDEGGIQFRILNSSKGPAVRATRAQADRVLYKAAIRHRLENQPNLMLFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 127 DLLVESDRVVGAVTQVGVRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFM-TDKITNRQIECGIT 243 + GRLKTGTP R+DG+TI + E+Q D +P FSF+ + RQ+ C +T Sbjct: 187 LKELKLPQGRLKTGTPPRIDGRTIDFSVLEEQPGDLDPVPVFSFLGRADMHPRQVPCWVT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T+ Sbjct: 247 HTNERTHDIIRAGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNG+ST+LP ++Q I ++ GLE +I+RPGYAIEYDY +P+ L +LE+K I+GL Sbjct: 307 EFYPNGVSTSLPFDVQLDLIHSMRGLENAHILRPGYAIEYDYFDPRGLKASLESKAITGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ + + R +Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGINAGLQVQGKEAWTPRRDQAYLGVLVDDLITRGVTEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R+SLR DNAD RLT G LG + + R F + + LKS + Sbjct: 427 YRMFTSRAEFRLSLREDNADMRLTEAGRGLGVVDDTRWDAFNRKRDAVSRETERLKSTWV 486 Query: 484 TSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI-----CPDA-----RKFSS 530 L + + K + + + L P+ + ++L + P+A + Sbjct: 487 NPAILPAADAEPVLGKGIEREYSLADLLRRPNVTYESLMGMQGGKYAPEAPLDDEPLLAE 546 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 + E+++I Y Y RQ E + + E +P DFDY + LS E+++KL+ KP Sbjct: 547 QIREQIEIGIKYHGYIARQADEVERLGASENTRLPADFDYKQVRGLSIEVQQKLAQHKPE 606 Query: 591 NLLQASKIEGMTPAALNLLLIYIKKNTVK 619 + QAS+I G+TPAA++LLL+++KK ++ Sbjct: 607 TIGQASRISGITPAAVSLLLVHLKKGVLR 635 >gi|229530212|ref|ZP_04419601.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae 12129(1)] gi|229332345|gb|EEN97832.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae 12129(1)] Length = 631 Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust. Identities = 284/626 (45%), Positives = 385/626 (61%), Gaps = 15/626 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA AA+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHETFDVIVVGGGHAGTEAALAAARTGQRTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D AGIQFR LN KGPAVR R QADR LY+ M+ + + NL + Sbjct: 62 EVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYMRNVLENTPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + I +V Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQAVDDVIVEHDHIRGVVTQMGLKFHAKAVVLTVGTFLGGKIHIGLENYAGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D ++ + E Q D FSFM + + RQI Sbjct: 182 ALAHRLRELPFRVDRLKTGTPPRIDANSVDFSVLEAQHGDNPTPVFSFMGKREHHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +++ HQIF+EPEG Sbjct: 242 CYITHTNERTHDVIRANLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADKDSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTTELYPNGISTSLPFDVQMQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKY 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 IHGLFFAGQINGTTGYEEAAAQGLMAGLNASLYSQDKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG + + R RF + I R L+ Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLVDDARWARFNQKIDNMAKERQRLQ 481 Query: 480 SLVLTSKN--------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL 531 + + L T +S + G+ + L P+ + + L ++ A Sbjct: 482 ETWMNPNSVGVEQLNTLLKTPMSREASGE-----DLLRRPEMTYELLTTLPAFAPALEDA 536 Query: 532 -VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 E+++I+ Y Y RQ E ++ E +P + DY + LSNE+ KL+ KP Sbjct: 537 EAAEQVEIQVKYDGYIQRQQDEIEKSLRHEHTKLPAELDYKQVKGLSNEVVLKLNAAKPE 596 Query: 591 NLLQASKIEGMTPAALNLLLIYIKKN 616 + AS+I G+TPAA+++LL+++KK+ Sbjct: 597 TIGIASRISGITPAAISILLVHLKKH 622 >gi|262172752|ref|ZP_06040430.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio mimicus MB-451] gi|261893828|gb|EEY39814.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio mimicus MB-451] Length = 631 Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust. Identities = 286/626 (45%), Positives = 385/626 (61%), Gaps = 15/626 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA AA+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHETFDVIVVGGGHAGTEAALAAARTGQRTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRSVLENTPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + I +V Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQAVDDVIVENDHIRGVVTQMGLKFHAKAVVLTVGTFLGGKIHIGLENFAGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D ++ + E Q D FSFM + + RQI Sbjct: 182 ALAHRLRELPFRVDRLKTGTPPRIDANSVDFSVLEAQHGDNPTPVFSFMGKREHHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CYITHTNERTHDVIRANLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTTELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 IHGLFFAGQINGTTGYEEAAAQGLMAGLNASLYSQDKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG + + R RF + I R L+ Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLVDDERWARFNQKIDNMAKERLRLQ 481 Query: 480 SLVLTSKN--------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SS 530 + + L T +S + G+ + L P+ + + L ++ S Sbjct: 482 ETWMNPNSVGVEQLNALLKTPMSREASGE-----DLLRRPEMTYELLTTLPAFTPALEDS 536 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 E+++I+ Y Y RQ E ++ E +P D DY + LSNE+ KLS KP Sbjct: 537 EAAEQVEIQVKYDGYIQRQQDEIEKSLRHEHTKLPVDLDYKQVKGLSNEVVLKLSTTKPE 596 Query: 591 NLLQASKIEGMTPAALNLLLIYIKKN 616 + AS+I G+TPAA+++LL+++KK+ Sbjct: 597 TIGIASRISGITPAAISILLVHLKKH 622 >gi|241759087|ref|ZP_04757198.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria flavescens SK114] gi|241320689|gb|EER56942.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria flavescens SK114] Length = 631 Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust. Identities = 290/619 (46%), Positives = 395/619 (63%), Gaps = 8/619 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 8 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 67 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY+ A++ + +QENLD+ Q Sbjct: 68 ALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKAAIREMLENQENLDLFQQA 127 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + + IS ++ + VVLT GTFL G IHIG GR GD + SL Sbjct: 128 VEDITLDGDRISGVMTAMGVEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 187 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + + GRLKTGTP R+DG+TI + + +Q D + FS + ++ RQ+ C I Sbjct: 188 GRLRELNLPQGRLKTGTPPRIDGRTIDFSQLTEQPGDTPVPVFSVRGNAEMHPRQVSCWI 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TNL+TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEGL T Sbjct: 248 THTNLQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEGLTT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK I G Sbjct: 308 NEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKTIQG 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AG N+ + + D + R +Y+GV++DDL +KGV E Sbjct: 368 LFFAGQINGTTGYEEAAAQGLLAGANAVQYVREQDPLLLRREQAYLGVLVDDLITKGVNE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + + LK+ Sbjct: 428 PYRMFTSRAEYRLQLREDNADMRLTEDGHKIGLVGEEQWRMFNEKREAIEREIQRLKTTW 487 Query: 483 LTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI---CPDARKFSSLVIERL 536 T + L+ + ++ + ++ L P+ L ++ P+ R VIE++ Sbjct: 488 YTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGAEPECR-LPENVIEQV 546 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y Y RQ E + E +P+D DYS + LS E+++KL+ KP + QAS Sbjct: 547 EIQVKYQGYIDRQNEEIDSRRDIETLKLPEDIDYSKVKGLSAEVQQKLNQHKPETVGQAS 606 Query: 597 KIEGMTPAALNLLLIYIKK 615 +I G+TPAA+ LL++++K+ Sbjct: 607 RISGITPAAVALLMVHLKR 625 >gi|325295306|ref|YP_004281820.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065754|gb|ADY73761.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Desulfurobacterium thermolithotrophum DSM 11699] Length = 634 Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust. Identities = 295/629 (46%), Positives = 394/629 (62%), Gaps = 19/629 (3%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M + YDVIV+G GHAGCEAA AA++G TAL T I MSCNPAIGG+ KG +VR Sbjct: 1 MWDGIYDVIVVGAGHAGCEAALAAARMGCKTALFTVNVDKIAEMSCNPAIGGVAKGTVVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G M + D GIQFR+LN +KGPAVR PR QAD+ YR M++ I + NL+++ Sbjct: 61 EIDALGGEMAKNIDETGIQFRILNRRKGPAVRAPRAQADKYAYRDRMRKIIENTPNLEIV 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + +V N+ VV+T GTFL+G I IG + GRM + +N Sbjct: 121 QQIVDDIIVEDGKVKGVVTHINARYGAKAVVVTAGTFLKGKIFIGFKEFEGGRMWEPAAN 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 L N +++ F RLKTGTP RLDG TI + K E+Q DE FS+ T+ QI C Sbjct: 181 KLSNFYIRHGFKVARLKTGTPVRLDGTTIDFSKMERQDGDEPPPFFSYWTEPKEIEQIPC 240 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIK---SYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 +T T ETHRII EN+ S +Y G+ K G RYCPSIEDKIV+F ++ H +F+EP Sbjct: 241 WLTYTTPETHRIIKENLHRSPMY-GECKLISGVGVRYCPSIEDKIVKFPDKERHHVFVEP 299 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EG NT YPNG ST+LP ++Q + IR+IPGLE IIRP YAIEYD+++P L+PTLET Sbjct: 300 EGRNTVEFYPNGTSTSLPFDVQEKIIRSIPGLENAKIIRPAYAIEYDFVDPTHLYPTLET 359 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKS-NKLDCICFSRTDSYIGVMIDDLT 416 K I GLF AGQINGTTGYEEAA QG+VAGIN+A + NK + R ++YIGVMIDDL Sbjct: 360 KIIKGLFNAGQINGTTGYEEAAGQGIVAGINAALYALNKDERFILGRDEAYIGVMIDDLV 419 Query: 417 SKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRS 476 +KGV EPYR+FTSRAEYR+ +R DNAD RL G + G + + +R + +Y ++ Sbjct: 420 NKGVREPYRLFTSRAEYRLLIRYDNADYRLAKYGYRFGLLTREQYERVKR---KYETIKV 476 Query: 477 LLKSLVLTSKNLSSTSISFKQDGKT-----RTAYEFLSYPDFSIQNL-----FSICPDAR 526 ++ L + ++ G T +T YE L P+ + + F + + R Sbjct: 477 FIEKLKEVKVKPEVINPVLEKAGSTPLKESKTVYEVLKRPEVKLYEILKVISFKLDIEDR 536 Query: 527 KFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSI 586 K ++E ++IE Y Y RQ+ + K+ + E IP+DFDYS +P +S E K+KL Sbjct: 537 KLLEEILEEVEIEVKYEGYIKRQLEDVKKFRKLENVKIPQDFDYSIVP-ISTEEKQKLKE 595 Query: 587 LKPFNLLQASKIEGMTPAALNLLLIYIKK 615 +KP L QA+++EG+ PA++ +L IYI+K Sbjct: 596 MKPLTLGQAARLEGIRPASIPILAIYIEK 624 >gi|56477079|ref|YP_158668.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Aromatoleum aromaticum EbN1] gi|81170514|sp|Q5P4J6|MNMG_AZOSE RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|56313122|emb|CAI07767.1| glucose inhibited division protein A [Aromatoleum aromaticum EbN1] Length = 652 Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust. Identities = 288/616 (46%), Positives = 388/616 (62%), Gaps = 6/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALAAARIGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 67 GGAMAAATDEGGIQFRILNASKGPAVRATRAQADRVLYKAAIRHRLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + ++ +V Q VVLT GTFL G+IH+G AGR GD P+ SL Sbjct: 127 DLTVSGDRVTGVVTQIGLAFEAPAVVLTAGTFLNGLIHVGLDNYSAGRAGDPPAISLGAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP RLD +TI + ++Q D+ + FSF+ + +Q+ C IT Sbjct: 187 LKELALPQGRLKTGTPPRLDARTIDFSVMQEQPGDDPVPVFSFLGRASQHPQQLPCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ H IFLEPEGL T+ Sbjct: 247 TNERTHDIIRANLDRSPMYSGVIEGVGPRYCPSIEDKIHRFADKTSHNIFLEPEGLTTNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q +R+I GLE I+RPGYAIEYDY +P+ L +LETK GLF Sbjct: 307 IYPNGISTSLPFDVQLAVVRSIRGLENAFILRPGYAIEYDYFDPRNLKSSLETKSFHGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG N+A + + C R ++Y+GV++DDL ++GV EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGANAALQVAGREAWCPRRDEAYLGVLVDDLITRGVSEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+SLR DNAD RLT G +LG + + R F + + L++ Sbjct: 427 RMFTSRAEYRLSLREDNADLRLTEKGRELGLVDDVRWAAFCEKRDAIERETARLRAAWAH 486 Query: 485 SKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI--CPDARKFSSLVIERLQIE 539 + + + K + +E L P+ L S+ P+ VIE+++I Sbjct: 487 PARVPAVDAERVVGKALEREYRFFELLRRPNTRYAELMSLPGAPENPATDPQVIEQIEIA 546 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + Y Y RQ E + E L+P D DYS + LS E+++KL++ KP L QA +I+ Sbjct: 547 AKYQGYIDRQQGEVAKQLQAESTLLPADLDYSRVRGLSKEVQQKLNLHKPGTLGQAGRIQ 606 Query: 600 GMTPAALNLLLIYIKK 615 G+TPAA++LL++++K+ Sbjct: 607 GVTPAAISLLMVWLKR 622 >gi|207722121|ref|YP_002252559.1| trna uridine 5-carboxymethylaminomethyl modification enzyme [Ralstonia solanacearum MolK2] gi|206587295|emb|CAQ17879.1| trna uridine 5-carboxymethylaminomethyl modification enzyme gida(glucose-inhibited division protein a) [Ralstonia solanacearum MolK2] Length = 647 Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust. Identities = 285/629 (45%), Positives = 386/629 (61%), Gaps = 15/629 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALAAARMGCQTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 67 GGAMALATDEGGIQFRILNSSKGPAVRATRAQADRVLYKAAIRHRLENQPNLMLFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 127 DLLVEGDRVVGAVTQVGVRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFM-TDKITNRQIECGIT 243 + GRLKTGTP R+DG+TI + E+Q D +P FSF+ + RQ+ C +T Sbjct: 187 LKELKLPQGRLKTGTPPRIDGRTIDFSVLEEQPGDLDPVPVFSFLGRADMHPRQVPCWVT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T+ Sbjct: 247 HTNEHTHDIIRAGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNG+ST+LP ++Q I ++ GLE +I+RPGYAIEYDY +P+ L +LE+K I+GL Sbjct: 307 EFYPNGVSTSLPFDVQLDLIHSMRGLENAHILRPGYAIEYDYFDPRGLKASLESKAIAGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ + R +Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGINAGLHVQGKEAWTPRRDQAYLGVLVDDLITRGVTEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R+SLR DNAD RLT G LG + + R F + + LKS + Sbjct: 427 YRMFTSRAEFRLSLREDNADMRLTEAGRSLGVVDDTRWDAFNRKRDAVSRETERLKSTWV 486 Query: 484 TSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI-----CPDA-----RKFSS 530 L + + K + + + L P+ + ++L + P+A + Sbjct: 487 NPAILPTADAEPVLGKGIEREYSLADLLRRPNVTYESLMGMQGGKYAPEAPLDDEPLLAE 546 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 + E+++I Y Y RQ E + + E +P DFDY + LS E+++KL+ KP Sbjct: 547 QIREQIEIGIKYHGYIARQADEVERLGASENTRLPADFDYKQVRGLSIEVQQKLAQHKPE 606 Query: 591 NLLQASKIEGMTPAALNLLLIYIKKNTVK 619 + QAS+I G+TPAA++LLL+++KK ++ Sbjct: 607 TIGQASRISGITPAAVSLLLVHLKKGVLR 635 >gi|15838697|ref|NP_299385.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Xylella fastidiosa 9a5c] gi|21263697|sp|Q9PBN4|MNMG_XYLFA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|9107234|gb|AAF84905.1|AE004026_6 glucose inhibited division protein A [Xylella fastidiosa 9a5c] Length = 629 Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust. Identities = 291/617 (47%), Positives = 381/617 (61%), Gaps = 9/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAG EAA AA+ GA T L+TH TIG+MSCNPAIGG+GKGHLV+EIDAL Sbjct: 8 YDVIVIGAGHAGSEAALAAARTGAHTLLLTHNIETIGAMSCNPAIGGIGKGHLVKEIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M ADAAGIQ+R LN KGPAVR R QADR LYR A+++ I Q L++ Q EV Sbjct: 68 GGAMAHAADAAGIQWRTLNASKGPAVRATRCQADRALYRAAIRQMIEGQARLNIFQAEVD 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + + VVLT GTFL G IHIG + AGRMGD P+ L Sbjct: 128 DLLFEGDTVCGAITHTGLHFKAPAVVLTAGTFLAGKIHIGPTQYAAGRMGDPPATMLAAR 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + F RLKTGTP R+DG+T+ + ++Q D SF+ + ++ Q+ C IT+ Sbjct: 188 LRERLFTVARLKTGTPPRIDGRTLNYTAMQEQPGDAPRPTMSFIGNSASHPPQVSCWITQ 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T TH II + S +YSG I+ GPRYCPSIEDK+VRF E+N HQIF+EPEGLN Sbjct: 248 TTERTHEIIRAALHRSPLYSGQIEGAGPRYCPSIEDKVVRFAEKNSHQIFVEPEGLNVID 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q + +R+I G E+ +I RPGYAIEYD+ +P+ L +LETK I+GLF Sbjct: 308 IYPNGISTSLPFDVQLELVRSIRGFEQAHITRPGYAIEYDFFDPRGLKASLETKAIAGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR L R +Y+GV++DDL + G EPY Sbjct: 368 FAGQINGTTGYEEAAAQGLLAGLNAARHVRGLSSWTPRRDQAYLGVLVDDLITHGTNEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG LG I + R F + L + T Sbjct: 428 RMFTSRAEYRLQLREDNADARLTAIGRDLGLIDDARWAHFNAKQEAVARECERLSAFWAT 487 Query: 485 SKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLF---SICPDARKFSSLVIERLQI 538 N + + + + P+ L S+ P + V E+++I Sbjct: 488 PGNALGREVKETLGVTLSRETNIIDLMKRPELDYAALMRVPSLGPGVD--DAQVAEQVEI 545 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 YA Y RQ E + E IP +FDY+++ LS E+ +KL ++P + QA +I Sbjct: 546 SVKYAGYLNRQSEEITRQQRHEATAIPLEFDYAAVRGLSTEVLQKLQHIQPQTVGQAQRI 605 Query: 599 EGMTPAALNLLLIYIKK 615 GMTPAA++LLL+++++ Sbjct: 606 PGMTPAAISLLLVHLER 622 >gi|296126685|ref|YP_003633937.1| glucose inhibited division protein A [Brachyspira murdochii DSM 12563] gi|296018501|gb|ADG71738.1| glucose inhibited division protein A [Brachyspira murdochii DSM 12563] Length = 616 Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust. Identities = 277/613 (45%), Positives = 385/613 (62%), Gaps = 7/613 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +N YDVIV+G GHAG EAA +A+LG +T +I+ TIG MSCNP+IGG+ KG +V+E Sbjct: 1 MNNKYDVIVVGAGHAGIEAALSSARLGMNTLIISINLDTIGQMSCNPSIGGVAKGTIVKE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G MG + D +QFR+LN KG AV PR QAD+ Y+ + + +Q NL + Q Sbjct: 61 IDALGGEMGLLIDKTMMQFRMLNRSKGKAVWAPRAQADKYAYKEEAAKTLYAQNNLTLHQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E N++ + + C V+LTTGTFL G+IHIG + AGR+G+ P+ Sbjct: 121 DIVTEIVVENNVLKGLKTERGREYECDAVILTTGTFLNGLIHIGPYQKQAGRIGELPAIG 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L ++ + GRLKTGTPAR+D +I +D E Q DE ++PFSF+ +KI Q C Sbjct: 181 LSDNLRALGLEVGRLKTGTPARVDYNSINFDILEMQKGDEEIVPFSFLDEKIDIVQEPCY 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT T+ H++I +NI S +YSG I GPRYCPSIEDK+VRF ++ HQ+ LE E Sbjct: 241 ITYTDTNIHKLIQDNIHLSPMYSGAITGIGPRYCPSIEDKVVRFADKPRHQLHLERESYR 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ VY NG S++LPEE+Q + IR++ GLE+V I++P YA+EYDY+NP EL PTLETKKI Sbjct: 301 TNEVYINGFSSSLPEEVQIKMIRSLKGLEEVKILKPAYAVEYDYVNPIELKPTLETKKIE 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLFLAGQINGT+GYEEAA QGL+AGIN+A K K R+D YIGV+IDDLT+KG Sbjct: 361 GLFLAGQINGTSGYEEAACQGLMAGINAALKIKKEAPFILKRSDGYIGVLIDDLTAKGTK 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EP+RMFTS+AE+R+ LR DNAD RLT + +G + R + ++ L L Sbjct: 421 EPHRMFTSQAEHRMLLRQDNADERLTELSYNIGLASKERLDKVRDKKRKTQILVEYLNKR 480 Query: 482 VLTSKNLSSTSISFKQDGK---TRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 LT K + + F ++ K + T + P+ I L S+ D ++ V+ +I Sbjct: 481 TLTQK--EAEDLGFTKEAKEYRSMTLSSIIKRPECGIDMLVSLIDD--NYNKDVLNNAEI 536 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 Y Y R + E ++I+ E LIP+DFDYS+L ++ + KL KP+N+ QA +I Sbjct: 537 AIKYEGYIARYLNEIRDIEKYENMLIPEDFDYSTLKSVKIDAINKLKQYKPYNISQALRI 596 Query: 599 EGMTPAALNLLLI 611 + + +++L++ Sbjct: 597 PEVDKSVVHILIL 609 >gi|37785809|gb|AAR02616.1| GidA [Aeromonas hydrophila] Length = 629 Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust. Identities = 279/619 (45%), Positives = 394/619 (63%), Gaps = 5/619 (0%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 + +DVIV+GGGHAG EAA AA++G +T L+TH T+G MSCNPAIGG+GKGHLV+E+ Sbjct: 4 HEQFDVIVVGGGHAGTEAATAAARMGLNTLLLTHNIDTLGHMSCNPAIGGIGKGHLVKEV 63 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G+M R D GIQFR LN KGPAVR R QADR LY+ +++ + + NL + Q Sbjct: 64 DALGGIMARAIDLGGIQFRTLNSSKGPAVRATRAQADRLLYKAVVRQMLENYPNLKIFQQ 123 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 + + ++ +V Q I TVVLT GTFL G+IHIG GR GD PS +L Sbjct: 124 ACDDLIMDGDRVAGVVTQSGIRISGKTVVLTVGTFLNGLIHIGMENYKGGRAGDPPSIAL 183 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECG 241 + RLKTGTP R+D +++ + + Q D+ FSF+ + + RQ+ C Sbjct: 184 AQRLRELPLRIDRLKTGTPPRIDARSVDFSVMQAQHGDDPRPVFSFIGNASQHPRQVPCY 243 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN TH +I N+ S +Y+G I+ GPRYCPSIEDKI RF ++ HQIF+EPEGL Sbjct: 244 VTHTNERTHEVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKITRFADKTAHQIFVEPEGLT 303 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T +YPNGIST+LP ++Q Q +R++ G E +I RPGYAIEYD+ +P++L +E+K I Sbjct: 304 THELYPNGISTSLPFDVQVQIVRSVRGFENAHITRPGYAIEYDFFDPRDLKANMESKCIG 363 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 LF AGQINGTTGYEEAAAQGL+AG+N+A ++ D R +YIGVM+DDL++ G Sbjct: 364 NLFFAGQINGTTGYEEAAAQGLLAGLNAALRAQGKDPWHPRRDQAYIGVMMDDLSTLGTR 423 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+ LR DNAD RLT IG +LG + + R +F +++ R ++S Sbjct: 424 EPYRMFTSRAEYRLLLREDNADLRLTAIGRELGLVDDERWSKFNAKMEQVEQERQRMRST 483 Query: 482 VLTSKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLFSICPDARKFS-SLVIERLQ 537 + ++ S +++ + + ++ E L P+ + L +I S S ++++ Sbjct: 484 WIHPQHPSLEAVNALVNTPLTREQSLEELLRRPEVTYDALMAIEGVGPALSDSAAADQVE 543 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ YA Y RQ E ++ E L+P D +Y + LSNE+ KL+ KP + QAS+ Sbjct: 544 IQIKYAGYIERQHDEVEKQLRNENTLLPLDMNYRDVNGLSNEVIAKLNDAKPQTIGQASR 603 Query: 598 IEGMTPAALNLLLIYIKKN 616 I G+TPAA+++LL+++KK+ Sbjct: 604 ISGITPAAISILLVHLKKH 622 >gi|298528148|ref|ZP_07015552.1| glucose inhibited division protein A [Desulfonatronospira thiodismutans ASO3-1] gi|298511800|gb|EFI35702.1| glucose inhibited division protein A [Desulfonatronospira thiodismutans ASO3-1] Length = 631 Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust. Identities = 279/614 (45%), Positives = 379/614 (61%), Gaps = 8/614 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D+I++G GHAGCEAA A+KLG +T ++T+ IG +SCNPAIGGL KGH+V+EIDAL Sbjct: 9 FDLIIVGAGHAGCEAAHAASKLGLATLVLTNNIDRIGHLSCNPAIGGLAKGHMVKEIDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+MG AD +GIQFR LN +KGPAV+ R Q DR Y + Q + S ++L +++ Sbjct: 69 GGIMGLWADESGIQFRRLNTRKGPAVQATRAQMDRSRYLFSAQSTLFSLDHLYIMEAFAE 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 I + V+LTTGTFL+G IH+G GR+GD S L +S Sbjct: 129 DLLVTSGRIRGVRTAFGEDFYAPAVLLTTGTFLQGQIHVGLRSSSGGRLGDPASAGLSHS 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 K D GRLKTGT RL ++I + ++Q D+ FSF T RQI C IT T Sbjct: 189 LRKLGLDLGRLKTGTVPRLLKESIDFSVMQEQHGDDPPPRFSFRGAPRTLRQIPCHITYT 248 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 + TH I + S +Y G I G RYCPSIEDK+ RF E+ HQIF+EPEGL++ V Sbjct: 249 SSSTHECINAGLDRSPMYQGLIHGTGARYCPSIEDKVARFPEKERHQIFVEPEGLDSHEV 308 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YPNGIST+LP ++Q + ++TIPGLEK I+RPGYAIEYDYI+P +L P LET+ + GL+ Sbjct: 309 YPNGISTSLPLDVQKKMLQTIPGLEKAIIVRPGYAIEYDYIHPTQLTPHLETRAVQGLYS 368 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGT+GYEEAAAQGL A +N +S+ D I R +Y+ V++DDL ++G EPYR Sbjct: 369 AGQINGTSGYEEAAAQGLWAALNIYARSHGTDFI-LKRDQAYMAVLVDDLITRGTSEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAEYR+ LR DNAD RLTP+G +LG + + K F Q+ L+ L+S+V+ Sbjct: 428 MFTSRAEYRLLLREDNADERLTPLGRELGLVDDAYWKIFTARQQQMQSLKEALRSMVIRP 487 Query: 486 KNLSSTSISFKQDG-----KTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 ST +Q G ++ + + L P SI+ L + + ++ER+Q + Sbjct: 488 DQ--STVKILEQIGAHPPKRSASLADILKQPSISIRELKPLWSGLDDYEDAILERVQTDI 545 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 + Y RQ A+ I+ E +P+D DY+ + LS E EKLS ++P L QA +I G Sbjct: 546 KFEGYISRQREMAERIRHLEDTGLPRDLDYTRVSGLSREAVEKLSAIRPETLGQAGRISG 605 Query: 601 MTPAALNLLLIYIK 614 +TPA L+ L IY+K Sbjct: 606 ITPATLSALQIYLK 619 >gi|170050885|ref|XP_001861513.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Culex quinquefasciatus] gi|167872390|gb|EDS35773.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Culex quinquefasciatus] Length = 658 Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust. Identities = 287/628 (45%), Positives = 411/628 (65%), Gaps = 27/628 (4%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDV+V+GGGHAG EA A AA++GA T L+T K +TIG MSCNP+ GG+GKGHL+REIDA Sbjct: 32 SYDVVVVGGGHAGTEACAAAARMGARTLLVTQKRATIGEMSCNPSFGGIGKGHLIREIDA 91 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDG+ GR D +G+Q++VLN ++GPAV GPR Q DR LYR +QRE+ E LD+++ V Sbjct: 92 LDGVCGRACDRSGVQYKVLNKRRGPAVWGPRAQIDRGLYRAVIQRELGETEGLDIVEASV 151 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E I I +++ +IR ++V+TTGTFLRG I+IG PAGR+GD P+ L Sbjct: 152 EDIVLEGGRIEGISLKNGDVIRTKSLVITTGTFLRGQINIGLETRPAGRIGDEPAIGLAT 211 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI---TNRQIECG 241 S + F RLKTGTP R+ +I + E+ D +PFSFM D++ Q++C Sbjct: 212 SLEQLGFKLARLKTGTPPRIKASSIDFSTLERHPGDNPPVPFSFMNDRVWLHAEDQLDCF 271 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T T+ E + I+ N+ + + ++ GPRYCPSIE K++RFG + HQI+LEPEG + Sbjct: 272 LTHTSPEVNEIVKRNLHCNRHVTEELT--GPRYCPSIESKVLRFGGKT-HQIWLEPEGFD 328 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 ++++YPNG+S LPEE Q + +R + GLEK + RPGY +EYD+++P+EL PTLETK++ Sbjct: 329 SELIYPNGLSCTLPEEEQVKLVRCLRGLEKAEVARPGYGVEYDFVDPRELLPTLETKRVR 388 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GL AGQINGTTGYEEAAAQG++AG N+A K + D + SRT+ Y+GV++DDLT+ G Sbjct: 389 GLLFAGQINGTTGYEEAAAQGVLAGANAAAKVLERDQLLISRTEGYLGVLVDDLTTLGTN 448 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAE+R+SLRPDNAD RLT G +LG + E R Q+ +RS ++ Sbjct: 449 EPYRMFTSRAEFRLSLRPDNADLRLTEKGYQLGLVSEER-------YQQMVTIRSKIRRA 501 Query: 482 VLTSKNLSSTSISFKQ-----DGKT---RTAYEFL--SYPDFSIQNLFSICPDARKFSS- 530 V ++ S ++K+ GK+ ++A+E L S D + L + P + S Sbjct: 502 VELLSDIKKGSNTWKEQLRLAQGKSSVYKSAFEMLAISVDDVKTEQLCELEPTVLGWISE 561 Query: 531 --LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPA-LSNELKEKLSIL 587 ++ ERL+IE+ Y+ Q+ E +E++ E+ IPK DY S LS E +EKL + Sbjct: 562 DRVLCERLKIEALYSLSIQDQIKEVEEVQKHEQLHIPKSIDYLSKSLNLSFEEQEKLVHI 621 Query: 588 KPFNLLQASKIEGMTPAALNLLLIYIKK 615 +P + AS+I+G+TP+ + L+ ++K+ Sbjct: 622 QPQTIAAASRIQGITPSTIVRLVRFVKQ 649 >gi|261410104|ref|YP_003246345.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Paenibacillus sp. Y412MC10] gi|261286567|gb|ACX68538.1| glucose inhibited division protein A [Paenibacillus sp. Y412MC10] Length = 628 Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust. Identities = 276/617 (44%), Positives = 390/617 (63%), Gaps = 12/617 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAGCEAA +A++GA T ++T + M CNP+IGG KGH+VREIDA Sbjct: 7 TYDVIVVGAGHAGCEAALASARMGAETLMVTINLDMVAFMPCNPSIGGPAKGHVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAV R QAD+ Y+ M+ + +E L + QG V Sbjct: 67 LGGEMGRNIDKTFIQMRMLNTGKGPAVHALRAQADKFSYQHTMKETMEKEEKLTLRQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + IV Q + R VVLTTGT+LRG + +G+L +G PS L + Sbjct: 127 DQLIVEDGVCVGIVTQTGTEYRAKAVVLTTGTYLRGKVIMGELMYESGPNNQQPSVKLAH 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + + FD R KTGTP R+ TI + KTE Q DE+ FS+ T N Q+ C +T Sbjct: 187 NLRELGFDLVRFKTGTPPRVHKDTIDFSKTEIQPGDEKPKFFSYETKSSDNEQLPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+++TH+II +N+ + ++SG I+ GPRYCPSIEDKIVRF ++ HQIFLEPEG NT Sbjct: 247 TSVDTHKIINDNLHRAPMFSGVIEGTGPRYCPSIEDKIVRFADKPKHQIFLEPEGKNTKE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 Y G+ST++PE++Q +R+IPG+EKV ++R GYAIEYD + P +L+P+LETKK+ GLF Sbjct: 307 YYVQGLSTSMPEDVQLAVLRSIPGMEKVEMMRNGYAIEYDAMVPTQLWPSLETKKLPGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QG++AGIN+ARK + + R+ YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGIMAGINAARKVQGKEPVILDRSQGYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYI-------QEYNFLRSL 477 R+ TSRAEYR+ LR DNAD RLT IG +G I E +R+AK++ QE LR Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEIGHDIGLISE---ERYAKFVLKKQLVEQEIERLRQT 483 Query: 478 LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 V + L + + DG L P+ + + S+ P + + E+++ Sbjct: 484 KVKPVEVNAMLEAAGSAPIVDGSNMLT--ILRRPEITFAMVESLSPSPYELDEEMKEQVE 541 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ YA Y +Q+ ++++ EK+ IP+D Y + L+ E ++KL+ ++P ++ QAS+ Sbjct: 542 IQIKYAGYIEKQLGHVEKLQKMEKKRIPEDIVYDEINGLAMEARQKLNKIRPISIGQASR 601 Query: 598 IEGMTPAALNLLLIYIK 614 I G+TPA +++LL+Y++ Sbjct: 602 IAGVTPADISILLVYLE 618 >gi|78043339|ref|YP_358879.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Carboxydothermus hydrogenoformans Z-2901] gi|123577254|sp|Q3AG55|MNMG_CARHZ RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|77995454|gb|ABB14353.1| glucose inhibited division protein A [Carboxydothermus hydrogenoformans Z-2901] Length = 631 Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust. Identities = 280/614 (45%), Positives = 393/614 (64%), Gaps = 7/614 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAG EAA +A++G T L+T + M CNPA+GG KG +VRE+DAL Sbjct: 8 YDVIVVGAGHAGVEAALASARMGLKTLLLTLSLDNVALMPCNPAVGGPAKGVVVREVDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG D IQ R+LN KGPAVR R QAD+ Y+ M++ I QENL + Q E Sbjct: 68 GGEMGINTDKTYIQIRMLNTGKGPAVRTLRAQADKRRYQEEMKKTIERQENLYLKQAETI 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + ++ + ++ VV+T+GT+L I IG + P+G G ++ L S Sbjct: 128 KILVEGEKVRGVLTRTGAVFTSRAVVVTSGTYLNSRIIIGDVHYPSGPAGFPYASLLSKS 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 F GR KTGTPAR+D +T+ + K +Q D+R + FS+M++ I + C +T T Sbjct: 188 LADLGFKLGRFKTGTPARVDKRTVDFSKMIEQPGDDRPLYFSYMSEGIKRPNVSCWLTYT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 NLETH II+EN+ S +YSG+IK GPRYCPSIEDK+VRF ++ HQ+FLEPEGL+T + Sbjct: 248 NLETHTIILENLHRSPLYSGEIKGVGPRYCPSIEDKVVRFSDKPRHQVFLEPEGLDTYEM 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+ST+LPE++Q + +RT+PGLE+V I+RP YAIEYDYI+P +L TLE K I GLF Sbjct: 308 YVQGMSTSLPEDLQIKMLRTLPGLERVEIMRPAYAIEYDYIDPTQLKLTLEAKHIQGLFF 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGT+GYEEAA QG+VAGIN+A + + R+++YIGVMIDDL +KGV +PYR Sbjct: 368 AGQINGTSGYEEAAGQGIVAGINAALYVKEKEPFILKRSEAYIGVMIDDLVTKGVTDPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK--SLVL 483 + TSRAEYR+ LR DNAD RLT G K+G + E R ++F + +++ N L L+ + Sbjct: 428 LLTSRAEYRLLLRHDNADLRLTEKGYKIGLVTEERWRKFNERVEKINKLMEFLEENQVTP 487 Query: 484 TSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 T +NL S + G + EFL P+ +++ + I +F V E+++I Sbjct: 488 TKRNLEIMEEYGTSPPKHGI--SGKEFLRRPEINMEAIEKIFAIDGQFPDDVKEQVEILV 545 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y +Q+ E + E + +P DFDYS + LS E +KL+ +KP N+ QAS++ G Sbjct: 546 KYEGYIEKQLKEIERFNKYEGKKLPPDFDYSKVKGLSAEAVQKLNAIKPENIGQASRVSG 605 Query: 601 MTPAALNLLLIYIK 614 +TPA +++LLIY++ Sbjct: 606 VTPADISVLLIYLE 619 >gi|157694474|ref|YP_001488936.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus pumilus SAFR-032] gi|166989734|sp|A8FJF9|MNMG_BACP2 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|157683232|gb|ABV64376.1| glucose-inhibited division protein A [Bacillus pumilus SAFR-032] Length = 628 Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust. Identities = 275/619 (44%), Positives = 393/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAG EAA +A+ GA T ++T + M CNP++GG KG +VREIDA Sbjct: 7 NYDVIVVGAGHAGVEAALASARQGAKTLVLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M R D IQ R+LN KGPAVR R QAD+ Y+ M++ + ++ NL ++QG V Sbjct: 67 LGGEMARNIDKTHIQMRMLNTGKGPAVRALRAQADKFQYQHEMKKTMENEPNLTMLQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + + +V Q + R +VVLTTGTFL+G I +G L +G PS L + Sbjct: 127 DHLIVKDDECKGVVTQTGANYRAKSVVLTTGTFLKGRIILGDLSYSSGPNNQQPSIKLSD 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 FD R KTGTP R++ +I + KTE Q D+ FS+ T + Q+ C +T Sbjct: 187 HLADLGFDLVRFKTGTPPRVNSHSIDYSKTEIQPGDDVPRAFSYETVEYITDQLPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+LETH+II EN+ S +YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSLETHQIIDENLHRSPMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q + + TIPGLE V ++R GYAIEYD I P +L+PTLETKKISGL+ Sbjct: 307 VYVQGLSTSLPEDVQQRMLSTIPGLENVQMMRAGYAIEYDAIVPTQLWPTLETKKISGLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QG++AGIN+ RK+ + + SR+D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGIMAGINAGRKALGKEEVILSRSDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR-----QKRFAKYIQEYNFLRSLLK 479 R+ TSRAEYR+ LR DNAD RLT +G +G I + R QK+ A ++ ++K Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTELGYHIGLISQERFQAFQQKKEAIEAEKKRLYSVIIK 486 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 T + + S S +DG A + + P+ + +++ + P S V E+++I+ Sbjct: 487 PTAETQEFIRSLGGSELKDGI--RASDLMKRPEMNYESVVRLAPAETPLPSDVCEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + +++K E + IP DY ++ ++ E K+KL ++P ++ QAS+I Sbjct: 545 IKYEGYIEKSLQQVEKLKKMENKKIPDRIDYDAIKGIATEAKQKLKEVRPLSVAQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+Y+++ + Sbjct: 605 GVNPADISILLVYLEQGRI 623 >gi|198426865|ref|XP_002123127.1| PREDICTED: similar to mitochondrial translation optimization 1 homolog isoform b (predicted) [Ciona intestinalis] Length = 652 Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust. Identities = 287/637 (45%), Positives = 403/637 (63%), Gaps = 39/637 (6%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVI++GGGHAGCEAA+ +A++GA T L+THK STIG MSCNP+ GG+GKGHL+REIDA Sbjct: 16 SYDVIIVGGGHAGCEAASASARVGARTLLLTHKLSTIGEMSCNPSFGGIGKGHLIREIDA 75 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDG+ GR+ D +GIQ+R+LN KKGPAV GPR Q DR LYR MQ EI + NLDV++G V Sbjct: 76 LDGICGRICDISGIQYRMLNRKKGPAVWGPRAQIDRNLYRENMQTEIHNTINLDVMEGSV 135 Query: 125 AGFNTEKNI---------ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMG 175 T + + +++ D +M+ VVLT GTFLRG I+IG + AGR+G Sbjct: 136 EDLVTTDVVEATPETKCRCNGVILSDGTMLHAKGVVLTAGTFLRGQINIGMIVKGAGRIG 195 Query: 176 DSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT- 234 D+P+ L + F+ GRLKTGTP R+ ++ + D PFSF +K+ Sbjct: 196 DAPAVGLARTIENLGFEMGRLKTGTPPRIAKDSVNFSGMVAYGGDMPPHPFSFENEKVWI 255 Query: 235 --NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQ 292 ++Q+ C T T E + I++ + + ++ GPRYCPSIE K+++F E++ H Sbjct: 256 DPDQQLTCYTTHTKPELEKCILDTLHMNKHVIEEVN--GPRYCPSIESKVLKFKEKS-HM 312 Query: 293 IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF 352 +LEPEGL ++V+Y G S +PEE Q + +R I GLE I RPGY +EYDY++P+++ Sbjct: 313 CWLEPEGLTSNVIYLQGFSCTMPEENQTEAVRMIQGLENAEITRPGYGVEYDYMDPRQVS 372 Query: 353 PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMI 412 TLET K+ GL+ AGQINGTTGYEEAAAQGL+AG+N+ARK+ KL +R++ YIGV++ Sbjct: 373 TTLETYKVKGLYFAGQINGTTGYEEAAAQGLIAGVNAARKAKKLSPFIVTRSEGYIGVLL 432 Query: 413 DDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIG-MKLGCIGERR----QKRFAKY 467 DDLT+ G EPYRMFTSR E+R++LRPD AD RLT G ++ GC+ E+R +KR Sbjct: 433 DDLTTMGTNEPYRMFTSRTEFRMTLRPDTADERLTEKGFIEGGCVSEKRMNNTKKRVNLL 492 Query: 468 IQEYNFLRSLLKS----LVLTSK---NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS 520 + + L+S+ K L LT NLS ++ +F R E + + S Sbjct: 493 TEAVDVLKSVKKPKNKWLELTGGKPVNLSHSTNAFHFLADVRGPRE--------VDVVLS 544 Query: 521 ICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEI---KFEEKRLIPKDFDYSSLPALS 577 + P+ R R ++ SS A Y+ +E K I K EE+ +IP DY ++P L Sbjct: 545 MFPETRAIMENTWLRNRLLSS-AVYSALLPVEQKNIEMVKREERLIIPDHIDYVNMPGLK 603 Query: 578 NELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIK 614 E++EKL+ +P N+ AS+I+G+TPA+L LL ++K Sbjct: 604 LEIREKLAKARPGNIAAASRIQGVTPASLVQLLKHVK 640 >gi|28198678|ref|NP_778992.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Xylella fastidiosa Temecula1] gi|182681369|ref|YP_001829529.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Xylella fastidiosa M23] gi|32129540|sp|Q87DB3|MNMG_XYLFT RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|28056769|gb|AAO28641.1| glucose inhibited division protein A [Xylella fastidiosa Temecula1] gi|182631479|gb|ACB92255.1| glucose inhibited division protein A [Xylella fastidiosa M23] gi|307579816|gb|ADN63785.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Xylella fastidiosa subsp. fastidiosa GB514] Length = 629 Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust. Identities = 290/617 (47%), Positives = 381/617 (61%), Gaps = 9/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAG EAA AA+ GA T L+TH TIG+MSCNPAIGG+GKGHLV+EIDAL Sbjct: 8 YDVIVIGAGHAGSEAALAAARTGAHTLLLTHNIETIGAMSCNPAIGGIGKGHLVKEIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M ADAAGIQ+R LN KGPAVR R QADR LYR A+++ I Q L++ Q EV Sbjct: 68 GGAMAHAADAAGIQWRTLNASKGPAVRATRCQADRSLYRAAIRQMIEGQARLNIFQAEVD 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + + VVLT GTFL G IHIG + AGRMGD P+ L Sbjct: 128 DLLFEGDTVCGAITHTGLHFKAPAVVLTAGTFLAGKIHIGPTQYAAGRMGDPPATMLAAR 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + RLKTGTP R+DG+T+ + ++Q D SF+ + ++ Q+ C IT+ Sbjct: 188 LRERLLTVARLKTGTPPRIDGRTLNYTAMQEQPGDAPRPTMSFIGNSASHPPQVSCWITQ 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T TH II + S +YSG I+ GPRYCPSIEDK+VRF E+N HQIF+EPEGLN Sbjct: 248 TTERTHEIIRAALHRSPLYSGQIEGTGPRYCPSIEDKVVRFAEKNSHQIFVEPEGLNVID 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q + +R+I G E+ +I RPGYAIEYD+ +P+ L +LETK I+GLF Sbjct: 308 IYPNGISTSLPFDVQLELVRSIRGFEQAHITRPGYAIEYDFFDPRGLKASLETKAIAGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR L R +Y+GV++DDL + G EPY Sbjct: 368 FAGQINGTTGYEEAAAQGLLAGLNAARHVRGLSSWTPRRDQAYLGVLVDDLITHGTNEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG LG + + R F + L +L T Sbjct: 428 RMFTSRAEYRLQLREDNADARLTAIGRDLGLVDDARWAHFNAKQEAVARECGRLSALWAT 487 Query: 485 SKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLF---SICPDARKFSSLVIERLQI 538 N + + + + P+ L S+ P + V E+++I Sbjct: 488 PGNALGREVKETLGVTLSRETNIIDLMKRPELDYAALMRVPSLGPGVD--DAQVAEQVEI 545 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 YA Y RQ E + E IP +FDY+++ LS E+ +KL ++P + QA +I Sbjct: 546 SVKYAGYLNRQSEEITRQQRHEATAIPLEFDYAAVRGLSTEVLQKLQHIQPQTVGQAQRI 605 Query: 599 EGMTPAALNLLLIYIKK 615 GMTPAA++LLL+++++ Sbjct: 606 PGMTPAAISLLLVHLER 622 >gi|289579529|ref|YP_003478156.1| glucose inhibited division protein A [Thermoanaerobacter italicus Ab9] gi|289529242|gb|ADD03594.1| glucose inhibited division protein A [Thermoanaerobacter italicus Ab9] Length = 633 Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust. Identities = 280/619 (45%), Positives = 391/619 (63%), Gaps = 14/619 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV V+G GHAG EAA A+LG T +I M+CNP+IGG K LVREIDAL Sbjct: 8 YDVAVVGLGHAGSEAALACARLGLKTVGFAVNLDSIALMACNPSIGGPAKSQLVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D + +Q R LN KGPAVR R Q D++LY+ M+ + Q+NLD+ Q E+ Sbjct: 68 GGEMAINTDKSLLQIRTLNTSKGPAVRSLRAQVDKKLYQANMKYTLERQQNLDIKQAEIV 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E N ++ +V + ++ +C ++TTGTFL+G + IG + +G G P+N L + Sbjct: 128 DILVEDNKVTGVVTKLGAIYKCKACIITTGTFLKGRVIIGDVSFESGPSGLFPANELSET 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + F R KTGTPAR+D ++I + K E Q DE + PFS+M DKI Q+ C +T T Sbjct: 188 LKRLGFKLMRFKTGTPARVDKRSIDFSKMEMQPGDEVITPFSYMHDKIEIEQLPCWLTYT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N TH IIM NI S ++SG+I G RYCPSIEDK+V+F + HQIF+EPEGLNT + Sbjct: 248 NKRTHEIIMANIDRSPLFSGEITGVGVRYCPSIEDKVVKFPHKERHQIFIEPEGLNTYEM 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+S++LPE++Q +F+RT+PGLE V ++RP YAIEYD I+P +L TLE+KKI GL+ Sbjct: 308 YVQGMSSSLPEDVQLEFLRTVPGLENVKVMRPAYAIEYDCIDPTQLKATLESKKIEGLYF 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ+NGT+GYEEAAAQGL+AGIN+A K + R+ +YIGV+IDDL +KG EPYR Sbjct: 368 AGQVNGTSGYEEAAAQGLMAGINAAMKLLNKPPVILDRSQAYIGVLIDDLVTKGTNEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF-AKYIQEYNFLRSLLKSLVLT 484 M TSRAEYR+ LR DNAD RLT +G ++G + E R ++F K IQ ++ L ++ Sbjct: 428 MLTSRAEYRLLLRQDNADLRLTELGYEIGLVTEERYEKFLKKKIQLEKEMKRLAGVVIKP 487 Query: 485 SKNLSSTSISFKQDGKTRTA-----YEFLSYPDF---SIQNLFSICPDARKFSSLVIERL 536 S+ +++ IS G T Y L P+ S + L PD V E++ Sbjct: 488 SEEVNNFLIS---RGSTPLVTGVDLYTLLKRPEIDYKSTKFLDKQRPD--DILESVAEQI 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 I Y Y +Q+ + + K E + IP++ DY +P LSNE KEKL+ ++P ++ QAS Sbjct: 543 DINIKYEGYILKQLRQIEHFKALENKKIPENIDYYQIPGLSNEAKEKLTKIRPTSIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKK 615 +I G++PA +++LLIY+++ Sbjct: 603 RISGVSPADISVLLIYMEQ 621 >gi|297545651|ref|YP_003677953.1| glucose inhibited division protein A [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296843426|gb|ADH61942.1| glucose inhibited division protein A [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 633 Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust. Identities = 280/619 (45%), Positives = 391/619 (63%), Gaps = 14/619 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV V+G GHAG EAA A+LG T +I M+CNP+IGG K LVREIDAL Sbjct: 8 YDVAVVGLGHAGSEAALACARLGLKTVGFAVNLDSIALMACNPSIGGPAKSQLVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D + +Q R LN KGPAVR R Q D++LY+ M+ + Q+NLD+ Q E+ Sbjct: 68 GGEMAINTDKSLLQIRTLNTSKGPAVRSLRAQVDKKLYQANMKYTLERQQNLDIKQAEIV 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E N ++ +V + ++ +C ++TTGTFL+G + IG + +G G P+N L + Sbjct: 128 DILVEDNKVTGVVTKLGAIYKCKACIITTGTFLKGRVIIGDVSFESGPSGLFPANELSET 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + F R KTGTPAR+D ++I + K E Q DE + PFS+M DKI Q+ C +T T Sbjct: 188 LKRLGFKLMRFKTGTPARVDKRSIDFSKMEMQPGDEVITPFSYMHDKIEIEQLPCWLTYT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N TH IIM NI S ++SG+I G RYCPSIEDK+V+F + HQIF+EPEGLNT + Sbjct: 248 NKRTHEIIMANIDRSPLFSGEITGVGVRYCPSIEDKVVKFPHKERHQIFIEPEGLNTYEM 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+S++LPE++Q +F+RT+PGLE V ++RP YAIEYD I+P +L TLE+KKI GL+ Sbjct: 308 YVQGMSSSLPEDVQLEFLRTVPGLENVRVMRPAYAIEYDCIDPTQLKATLESKKIEGLYF 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ+NGT+GYEEAAAQGL+AGIN+A K + R+ +YIGV+IDDL +KG EPYR Sbjct: 368 AGQVNGTSGYEEAAAQGLMAGINAAMKLLNKPPVILDRSQAYIGVLIDDLVTKGTNEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF-AKYIQEYNFLRSLLKSLVLT 484 M TSRAEYR+ LR DNAD RLT +G ++G + E R ++F K IQ ++ L ++ Sbjct: 428 MLTSRAEYRLLLRQDNADLRLTELGYEIGLVTEERYEKFLKKKIQLEKEMKRLAGVVIKP 487 Query: 485 SKNLSSTSISFKQDGKTRTA-----YEFLSYPDF---SIQNLFSICPDARKFSSLVIERL 536 S+ +++ IS G T Y L P+ S + L PD V E++ Sbjct: 488 SEEVNNFLIS---RGSTPLVTGVDLYTLLKRPEIDYKSTKFLDKQRPD--DILESVAEQI 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 I Y Y +Q+ + + K E + IP++ DY +P LSNE KEKL+ ++P ++ QAS Sbjct: 543 DINIKYEGYILKQLRQIEHFKALENKKIPENIDYYQIPGLSNEAKEKLTKIRPTSIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKK 615 +I G++PA +++LLIY+++ Sbjct: 603 RISGVSPADISVLLIYMEQ 621 >gi|209696454|ref|YP_002264385.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Aliivibrio salmonicida LFI1238] gi|238058373|sp|B6EHU8|MNMG_ALISL RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|208010408|emb|CAQ80754.1| glucose inhibited division protein [Aliivibrio salmonicida LFI1238] Length = 629 Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust. Identities = 285/616 (46%), Positives = 393/616 (63%), Gaps = 13/616 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIVIGGGHAG EAA AA+ G T L+TH T+G MSCNPAIGG+GKGHLV+E+DA Sbjct: 6 NFDVIVIGGGHAGTEAALAAARTGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLM D +GIQFR LN KGPAVR R QADR LY+ ++ + +Q NL + Q V Sbjct: 66 LGGLMAEAIDHSGIQFRTLNASKGPAVRATRAQADRALYKTYVRSVLENQPNLTLFQQAV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + V Q R +VVLT GTFL G IHIG GR GD S +L Sbjct: 126 DDLIIENDKVIGAVTQMGLKFRAKSVVLTAGTFLGGQIHIGMENFSGGRAGDPSSITLAQ 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 F RLKTGTP R+D +++ + E Q D FSF+ ++ + +Q+ C IT Sbjct: 186 RLRDRPFRIDRLKTGTPPRIDARSVDFSNLEAQPGDNPTPVFSFLGNRQQHPQQVNCFIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I +N+ S +Y+G I+ GPRYCPSIEDK++RF +++ HQIF+EPEGL T Sbjct: 246 HTNEKTHDVIRKNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKDSHQIFIEPEGLTTH 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK I GL Sbjct: 306 ELYPNGISTSLPFDVQLQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKATYETKFIEGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N++ S + R ++Y+GV+IDDL++ G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLMAGLNASLFSQGKEGWSPRRDEAYMGVLIDDLSTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLT G +LG + + R RF + ++ R LK + + Sbjct: 426 YRMFTSRAEYRLSLREDNADLRLTEQGRELGLVDDIRWSRFNEKVENIEKERQRLKDIWI 485 Query: 484 --TSKNLSSTSISFKQD-GKTRTAYEFLSYPDFSIQNLFSI-----CPDARKFSSLVIER 535 TS+N+ + K + + + L P+ + +L +I D ++ S E+ Sbjct: 486 NPTSENIDQVNSILKTPIVREASGEDLLRRPEVTYSSLMTIEKFGPASDDQQAS----EQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I++ YA Y RQ E ++ E +P D +Y+ + LSNE+ KLS KP ++ A Sbjct: 542 VEIQTKYAGYIQRQRDEIEKSLRHENTKLPFDLEYNKVKGLSNEVVAKLSDAKPESIGIA 601 Query: 596 SKIEGMTPAALNLLLI 611 S+I G+TPAA+++LL+ Sbjct: 602 SRISGITPAAISILLV 617 >gi|52082647|ref|YP_081438.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus licheniformis ATCC 14580] gi|52788046|ref|YP_093875.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus licheniformis ATCC 14580] gi|319648513|ref|ZP_08002729.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus sp. BT1B_CT2] gi|81170519|sp|Q65CN2|MNMG_BACLD RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|52005858|gb|AAU25800.1| glucose-inhibited division protein [Bacillus licheniformis ATCC 14580] gi|52350548|gb|AAU43182.1| GidA [Bacillus licheniformis ATCC 14580] gi|317389592|gb|EFV70403.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus sp. BT1B_CT2] Length = 628 Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust. Identities = 275/618 (44%), Positives = 392/618 (63%), Gaps = 7/618 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+V+G GHAG EAA +A+ GA T ++T + M CNP++GG KG +VREIDAL Sbjct: 8 YDVVVVGAGHAGVEAALASARQGAKTLVLTINLDMVAFMPCNPSVGGPAKGIVVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + D IQ R+LN KGPAVR R QAD+ Y+ M++ + ++ NL ++QG V Sbjct: 68 GGEMAKNIDKTHIQMRLLNTGKGPAVRALRAQADKFQYQHEMKKTLENEPNLTMLQGMVE 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E ++ Q + R TVVLTTGTFLRG I +G L +G PS L Sbjct: 128 RLLIEDGECRGVITQTGAEYRSKTVVLTTGTFLRGKIILGDLSYSSGPNNQQPSIKLSEH 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + FD R KTGTP R++ +I + KTE Q DE FS+ T + Q+ C +T T Sbjct: 188 LEELGFDLVRFKTGTPPRVNSHSIDYSKTEIQPGDEVPRAFSYETVEYITDQLPCWLTYT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 + ETH II N+ S +YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT V Sbjct: 248 SPETHEIIDNNLHRSPMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQEV 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+ST+LPE++Q + + TIPGLE V ++R GYAIEYD I P +L+PTLETKKI GLF Sbjct: 308 YVQGLSTSLPEDVQRKMLSTIPGLENVQMMRAGYAIEYDAIVPTQLWPTLETKKIPGLFT 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGT+GYEEAA QG++AGIN+ RK+ + + SR+D+YIGV+IDDL +KG EPYR Sbjct: 368 AGQINGTSGYEEAAGQGIMAGINAGRKALGKEEVILSRSDAYIGVLIDDLVTKGTNEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL-- 483 + TSRAEYR+ LR DNAD RLT IG ++G I E R ++F + + L S+++ Sbjct: 428 LLTSRAEYRLLLRHDNADLRLTEIGYQIGLISEERYQKFQEKKAAIEAEKKRLHSVIIKP 487 Query: 484 TSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 T +N + S S +DG T + + P+ + + + ++ P +K + V E+++I+ Sbjct: 488 TKENQEYIRSLGGSELKDGIRAT--DLMKRPEMNYETVTALAPPEQKVAGDVAEQVEIQI 545 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y + + + +++K E + IP DY ++ ++ E ++KL ++P ++ QAS+I G Sbjct: 546 KYEGYIEKSLQQVEKLKKMENKKIPDRIDYDAIKGIATEARQKLKEVRPLSVAQASRISG 605 Query: 601 MTPAALNLLLIYIKKNTV 618 + PA +++LL+Y+++ + Sbjct: 606 VNPADISILLVYLEQGRI 623 >gi|20807573|ref|NP_622744.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Thermoanaerobacter tengcongensis MB4] gi|22095718|sp|Q8RAT8|MNMG1_THETN RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG 1; AltName: Full=Glucose-inhibited division protein A 1 gi|20516110|gb|AAM24348.1| NAD/FAD-utilizing enzyme apparently involved in cell division [Thermoanaerobacter tengcongensis MB4] Length = 633 Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust. Identities = 276/617 (44%), Positives = 392/617 (63%), Gaps = 10/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV V+G GHAG EAA +A+LG ST I M+CNP+IGG K LVREIDAL Sbjct: 8 YDVCVVGLGHAGSEAALASARLGLSTVGFATNLDAIALMACNPSIGGPAKAQLVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D + +Q R LN KGPAVR R Q D++LY++ M+ + QENLD+ Q E+ Sbjct: 68 GGQMAINTDKSLLQMRTLNTSKGPAVRSLRAQVDKKLYQMNMKHTLERQENLDIKQAEIV 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E N ++ +V + ++ +C ++TTGTFL+G + IG++ +G G P++ L + Sbjct: 128 DILVEDNKVTGVVTKLGAIYKCKACIITTGTFLKGRVIIGEVDFESGPSGLFPASELSEA 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + F R KTGTP R+D ++I + K E Q DE + PFSFM DKI Q+ C +T T Sbjct: 188 LKRLGFKLMRFKTGTPPRVDKRSIDFSKMEIQPGDEVITPFSFMHDKIEIEQMPCWLTYT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N +TH+II +NI + +++G I G RYCPSIEDK+V+F R HQIF+EPEG +T + Sbjct: 248 NEKTHKIIRDNIHRAPLFTGAITGVGVRYCPSIEDKVVKFPHRERHQIFIEPEGRDTYEM 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+S++LPE++Q +F+RT+PGLE V ++RP YAIEYD I+P +L TLE+K I GL+ Sbjct: 308 YVQGMSSSLPEDVQLEFLRTVPGLENVRVMRPAYAIEYDCIDPTQLKATLESKWIEGLYF 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ+NGT+GYEEAAAQGL+AGIN+A K + R+ +YIG++IDDL +KG EPYR Sbjct: 368 AGQVNGTSGYEEAAAQGLMAGINAAMKILNKPPVVLDRSQAYIGILIDDLVTKGTNEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFA-KYIQEYNFLRSLLKSLVLT 484 M TSRAEYR+ LR DNAD RLT IG ++G + E R ++F K IQ +R L +V Sbjct: 428 MLTSRAEYRLLLRQDNADFRLTEIGKEIGLVTEERYEKFLRKKIQLEKEMRRLSTVMVRP 487 Query: 485 SKNLSSTSISFKQDGKTRTA-----YEFLSYPDFSIQNLFSICPD-ARKFSSLVIERLQI 538 ++ +++ IS G T Y L P+ ++ + PD V E++ I Sbjct: 488 TEEVNNFLIS---RGSTPLVSGVDLYTLLKRPEVDYKSTKFLDPDRPDDILDSVAEQIDI 544 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 Y Y +Q+ + ++ K E + IP+D DY + LSNE KEKLS ++P ++ QAS+I Sbjct: 545 NIKYEGYILKQLRQVEQFKAMENKKIPEDIDYYQISGLSNEAKEKLSKIRPTSVGQASRI 604 Query: 599 EGMTPAALNLLLIYIKK 615 G++PA +++LLIY+++ Sbjct: 605 SGVSPADISVLLIYLQQ 621 >gi|117619063|ref|YP_858690.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|166222903|sp|A0KQY9|MNMG_AERHH RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|117560470|gb|ABK37418.1| glucose-inhibited division protein A [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 629 Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust. Identities = 279/624 (44%), Positives = 395/624 (63%), Gaps = 15/624 (2%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 + +DVIV+GGGHAG EAA AA++G +T L+TH T+G MSCNPAIGG+GKGHLV+E+ Sbjct: 4 HEQFDVIVVGGGHAGTEAATAAARMGLNTLLLTHNIDTLGHMSCNPAIGGIGKGHLVKEV 63 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G+M R D GIQFR LN KGPAVR R QADR LY+ +++ + + NL + Q Sbjct: 64 DALGGIMARAIDLGGIQFRTLNSSKGPAVRATRAQADRLLYKAVVRQMLENYPNLKIFQQ 123 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 + + ++ +V Q I TVVLT GTFL G+IHIG GR GD PS +L Sbjct: 124 ACDDLIMDGDRVAGVVTQSGIRISGKTVVLTVGTFLNGLIHIGMENYKGGRAGDPPSIAL 183 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECG 241 + RLKTGTP R+D +++ + Q+ D+ FSF+ D + RQ+ C Sbjct: 184 AQRLRELPLRIDRLKTGTPPRIDARSVDLSVMQAQYGDDPRPVFSFIGDASQHPRQVPCY 243 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN TH +I N+ S +Y+G I+ GPRYCPSIEDKI RF ++ HQIF+EPEGL Sbjct: 244 VTHTNERTHEVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKITRFADKTAHQIFVEPEGLT 303 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T +YPNGIST+LP ++Q Q +R++ G E +I RPGYAIEYD+ +P++L +E+K I Sbjct: 304 THELYPNGISTSLPFDVQVQIVRSVRGFENAHITRPGYAIEYDFFDPRDLKANMESKCIP 363 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 LF AGQINGTTGYEEAAAQGL+AG+N+ ++ + D R +YIGVM+DDL++ G Sbjct: 364 NLFFAGQINGTTGYEEAAAQGLLAGLNAGLRAQEKDAWHPRRDQAYIGVMMDDLSTLGTR 423 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+ LR DNAD RLT IG +LG + + R +F +++ R ++S Sbjct: 424 EPYRMFTSRAEYRLLLREDNADLRLTGIGRELGLVDDERWGKFNAKMEQVEQERQRMRST 483 Query: 482 VLTSKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLFSI------CPDARKFSSLV 532 + ++ S +++ + + ++ E L P+ + L +I PD + Sbjct: 484 WIHPQHPSLEAVNALVNTPLTREQSLEELLRRPEVTYDALMAIEGVGPALPD-----TAA 538 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 ++++I+ YA Y RQ E ++ E L+P D +Y + LSNE+ KL+ KP + Sbjct: 539 ADQVEIQIKYAGYIERQHDEVEKQLRNENTLLPLDMNYRDVNGLSNEVIAKLNDAKPQTI 598 Query: 593 LQASKIEGMTPAALNLLLIYIKKN 616 QAS+I G+TPAA+++LL+++KK+ Sbjct: 599 GQASRISGITPAAISILLVHLKKH 622 >gi|261213272|ref|ZP_05927554.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio sp. RC341] gi|260837546|gb|EEX64249.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio sp. RC341] Length = 631 Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust. Identities = 285/626 (45%), Positives = 385/626 (61%), Gaps = 15/626 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA AA+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHETFDVIVVGGGHAGTEAALAAARTGQRTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRNVLENTPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V + + I +V Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQAVDDVIVDNDHIRGVVTQMGLKFHAKAVVLTVGTFLGGKIHIGLENFSGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D ++ + E Q D FSFM + + RQI Sbjct: 182 ALAHRLRELPFRVDRLKTGTPPRIDANSVDFSVLEAQHGDNPTPVFSFMGKREHHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CYITHTNDRTHDVIRANLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTTELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 IHGLFFAGQINGTTGYEEAAAQGLMAGLNASLYSQDKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG + + R RF + I R L+ Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLVDDARWARFNQKIDNMAKERQRLQ 481 Query: 480 SLVLTSKN--------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SS 530 + + L T +S + G+ + L P+ + + L ++ S Sbjct: 482 ETWMNPNSVGVEQLNALLKTPMSREASGE-----DLLRRPEMTYELLTTLPAYTPALEDS 536 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 E+++I+ Y Y RQ E ++ E +P D DY + LSNE+ KLS KP Sbjct: 537 EAAEQVEIQVKYDGYIQRQQDEIEKSLRHEHTKLPIDLDYKQVKGLSNEVVLKLSTAKPE 596 Query: 591 NLLQASKIEGMTPAALNLLLIYIKKN 616 + AS+I G+TPAA+++LL+++KK+ Sbjct: 597 TIGIASRISGITPAAISILLVHLKKH 622 >gi|288575406|ref|ZP_05976919.2| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria mucosa ATCC 25996] gi|288568066|gb|EFC89626.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria mucosa ATCC 25996] Length = 631 Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust. Identities = 288/618 (46%), Positives = 392/618 (63%), Gaps = 6/618 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 8 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 67 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY+ A++ + +QENLD+ Q Sbjct: 68 ALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKAAIREMLENQENLDLFQQS 127 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + + IS ++ + VVLT GTFL G IHIG GR GD + SL Sbjct: 128 VDDVTLDGDRISGVITAMGVEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 187 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + + GRLKTGTP R+DG+TI + + +Q D + FS + + RQ+ C I Sbjct: 188 GRLRELNLPQGRLKTGTPPRIDGRTIDFSQLTEQPGDTPVPVFSVRGNADMHPRQVSCWI 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TNL+TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEGL T Sbjct: 248 THTNLKTHEIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEGLTT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK I G Sbjct: 308 NEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKTIQG 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AG N+ + + D + R +Y+GV++DDL +KGV E Sbjct: 368 LFFAGQINGTTGYEEAAAQGLLAGANAVQYVREQDPLLLRREQAYLGVLVDDLITKGVNE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT G K+G + E + + F + + LK+ Sbjct: 428 PYRMFTSRAEYRLQLREDNADMRLTEDGHKIGLVSEAQWRMFNEKREAIEREIQRLKTTW 487 Query: 483 LTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI--CPDARKFSSLVIERLQ 537 T + L+ + ++ + ++ L P+ L ++ + S+ VIE+++ Sbjct: 488 YTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGARSSENLSAEVIEQVE 547 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ Y Y RQ E + E +P D DYS + LS E+++KL+ KP + QAS+ Sbjct: 548 IQVKYQGYIDRQNEEIDSRRDIETLKLPDDIDYSKVKGLSAEVQQKLNQHKPETVGQASR 607 Query: 598 IEGMTPAALNLLLIYIKK 615 I G+TPAA+ LL++++K+ Sbjct: 608 ISGVTPAAVALLMVHLKR 625 >gi|262273123|ref|ZP_06050940.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Grimontia hollisae CIP 101886] gi|262222879|gb|EEY74187.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Grimontia hollisae CIP 101886] Length = 629 Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust. Identities = 294/623 (47%), Positives = 400/623 (64%), Gaps = 17/623 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DA Sbjct: 6 NFDVIVVGGGHAGTEAALAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLM R D GIQFR LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 66 LGGLMARAIDKGGIQFRTLNASKGPAVRATRAQADRALYKAAVREALENQPNLMLFQQAV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E++ ++ +V + R VVLT GTFL G IHIG GR GD PS +L + Sbjct: 126 NDLIVEQDQVTGVVTEMGLKFRARAVVLTVGTFLGGKIHIGLENYAGGRAGDPPSIALAD 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN--RQIECGI 242 + F RLKTGTP R+D +T+ + + Q D+ FSFM K+++ RQ+ C I Sbjct: 186 RLRELPFRVDRLKTGTPPRIDARTVDFSVMQTQHGDDPCPVFSFMG-KVSDHPRQVPCYI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH +I +N+ S +Y+G I+ GPRYCPSIEDK++RF +++ HQIF+EPEGL T Sbjct: 245 TYTNEQTHDVIRKNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKDKHQIFVEPEGLTT 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + +YPNGIST+LP ++Q IR+I G E +IRPGYAIEYD+ +P++L T ETK I G Sbjct: 305 NELYPNGISTSLPFDVQMGIIRSIKGFENARVIRPGYAIEYDFFDPRDLKQTFETKFIKG 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AG N+A + + C R +Y+GV+IDDL++ G E Sbjct: 365 LFFAGQINGTTGYEEAAAQGLLAGANAALFAQDKEGWCPRRDQAYMGVLIDDLSTMGTKE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYI----QEYNFLRSLL 478 PYRMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + + QE LRS Sbjct: 425 PYRMFTSRAEYRLLLREDNADLRLTEMGRELGLVDDERWARFNQKLENMEQETQRLRSTW 484 Query: 479 KSLVLTSKN----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIE 534 + + T +S + +G+ ++Y D +F+ + + S E Sbjct: 485 IHPASEHADALNAILKTPLSREANGEDLLRRPEVTYNDLVANPVFAPAHEDLQAS----E 540 Query: 535 RLQIESSYAAYTGRQMIE-AKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 +++I+ YA Y RQ E K I+ E RL P D DY+ + LSNE+ KL +P + Sbjct: 541 QVEIQIKYAGYINRQKEEIEKYIRHENTRL-PIDLDYTQIKGLSNEVVAKLRDARPETIG 599 Query: 594 QASKIEGMTPAALNLLLIYIKKN 616 +AS+I G+TPAA+++LL+++KK Sbjct: 600 KASRISGITPAAISILLVHLKKQ 622 >gi|270013418|gb|EFA09866.1| hypothetical protein TcasGA2_TC012014 [Tribolium castaneum] Length = 664 Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust. Identities = 297/639 (46%), Positives = 417/639 (65%), Gaps = 32/639 (5%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 +++YDVIV+GGGHAG EA+A AA++GA T L+THK T+G MSCNP+ GG+GKGHL+REI Sbjct: 27 DKNYDVIVVGGGHAGSEASAAAARMGAQTLLVTHKKETVGEMSCNPSFGGIGKGHLMREI 86 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREIL-SQENLDVIQ 121 DALDG+ GR+ D +GIQ++VLN +KGPAV G R Q DR+LY+ +Q E+ + NLD++ Sbjct: 87 DALDGICGRMCDLSGIQYKVLNKRKGPAVWGYRAQIDRDLYKKHIQTELFENTPNLDILV 146 Query: 122 GEVAGFNTEKNIISS----------IVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPA 171 V E +S I++ D + I +V++TTGTFL G I+IG PA Sbjct: 147 ASVEDLIVENPTTNSNKQTVIDCHGIILSDGTKIHAKSVIITTGTFLNGQINIGTKIYPA 206 Query: 172 GRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD 231 GR+GD PS L + GRLKTGTP RL+ TI + + Q D +PFSFM D Sbjct: 207 GRIGDQPSIGLAKTLAALSLKMGRLKTGTPPRLNSNTINYKVCDIQKGDNPPLPFSFMND 266 Query: 232 KITNR---QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGER 288 K+ + Q+ C +T+T+L+ II N+ + + ++ GPRYCPSIE K++RFG R Sbjct: 267 KVWIKPEDQLVCYLTKTSLDIEPIIRNNLHVNRHVTEEVT--GPRYCPSIESKVLRFGGR 324 Query: 289 NGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINP 348 HQ++LEPEGL +D+VYPNG+S LPEE+Q + I +IPGLEK I RPGY +EYD+++P Sbjct: 325 Q-HQVWLEPEGLTSDIVYPNGLSCTLPEELQFELIHSIPGLEKAEITRPGYGVEYDFVDP 383 Query: 349 KELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSAR-----KSNKLDCICFSR 403 +EL TLE K+I LFLAGQINGTTGYEEAAAQG++AGIN+A KS I SR Sbjct: 384 RELQTTLELKRIHNLFLAGQINGTTGYEEAAAQGIIAGINAAALVALGKSP----ITVSR 439 Query: 404 TDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKR 463 T+ YIGV+IDDLT+ G EPYRMFTSRAE+R++LRPDNAD RLT G ++GC+ + R + Sbjct: 440 TEGYIGVLIDDLTTLGTNEPYRMFTSRAEFRLTLRPDNADQRLTAKGYQVGCVNKARYDK 499 Query: 464 FAKYIQEYNFLRSLLKSLVLTSKNLSS-TSISFKQDGKTRTAYEFLSYPD--FSIQNLFS 520 ++ N SLLKS+ ++ ++ ++ ++A+ L + +I L + Sbjct: 500 MVAMQKKLNDGISLLKSITKPARTWRKLLKMAPSRNMMQKSAFNMLDCYNEGITISMLAT 559 Query: 521 ICPDARKFSS--LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFD-YSSLPALS 577 + P+ + L+ RL IE++Y A Q +E +E++ EE LIPKD D YS L+ Sbjct: 560 VAPELLPLTHDPLLENRLHIEATYEAAASEQAVEVEEVRKEEALLIPKDLDYYSDTLNLN 619 Query: 578 NELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKN 616 +E +EKL ++P + AS+I G++P+++ LL ++KKN Sbjct: 620 SEEREKLCSIQPQTIAAASRIPGISPSSVFRLLRFVKKN 658 >gi|262402091|ref|ZP_06078655.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio sp. RC586] gi|262351737|gb|EEZ00869.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio sp. RC586] Length = 631 Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust. Identities = 285/622 (45%), Positives = 385/622 (61%), Gaps = 7/622 (1%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA AA+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHETFDVIVVGGGHAGTEAALAAARTGQRTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRNVLENTPNLALF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + I +V Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQAVDDVIVENDHIRGVVTQMGLKFHAKAVVLTVGTFLGGKIHIGLENFAGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D ++ + E Q D FSFM + + RQI Sbjct: 182 ALAHRLRELPFRVDRLKTGTPPRIDANSVDFSVLEAQHGDNPTPVFSFMGKREYHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CYITHTNERTHDVIRANLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTTELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 IHGLFFAGQINGTTGYEEAAAQGLMAGLNASLYSQDKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG + + R RF + I R L+ Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLVDDARWARFNQKIDNMAKERQRLQ 481 Query: 480 SLVLTSKNLSSTSI-SFKQDGKTRTA--YEFLSYPDFSIQNLFSICPDARKF--SSLVIE 534 + ++ + + + +R A + L P+ + + L + P S E Sbjct: 482 DTWMNPNSVGVEQLNALLKTPMSREACGEDLLRRPEMTYE-LLTTLPAFVPVLEDSEAAE 540 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E ++ E +P D DY + LSNE+ KLS KP + Sbjct: 541 QVEIQVKYDGYIQRQQDEIEKSLRHEHTKLPVDLDYKQVKGLSNEVVLKLSTTKPETIGI 600 Query: 595 ASKIEGMTPAALNLLLIYIKKN 616 AS+I G+TPAA+++LL+++KK+ Sbjct: 601 ASRISGITPAAISILLVHLKKH 622 >gi|299065186|emb|CBJ36352.1| Glucose-inhibited division protein A, tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Ralstonia solanacearum CMR15] Length = 647 Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust. Identities = 284/629 (45%), Positives = 384/629 (61%), Gaps = 15/629 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALAAARMGCQTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 67 GGAMALATDEGGIQFRILNSSKGPAVRATRAQADRVLYKAAIRHRLENQPNLMLFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 127 DLLVEGDRVVGAVTQVGVRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTD-KITNRQIECGIT 243 + GRLKTGTP R+DG+TI + E Q D +P FSF+ + RQ+ C +T Sbjct: 187 LKELKLPQGRLKTGTPPRIDGRTIDFSVLEAQPGDLDPVPVFSFLGHADMHPRQVPCWVT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T+ Sbjct: 247 HTNERTHDIIRAGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLTTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNG+ST+LP ++Q I ++ GLE+ +I+RPGYAIEYDY +P+ L +LE+K I+GL Sbjct: 307 EFYPNGVSTSLPFDVQLDLIHSMRGLEQAHILRPGYAIEYDYFDPRGLKASLESKAIAGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ + R +Y+GV++DDL ++GV EP Sbjct: 367 FFAGQINGTTGYEEAAAQGLLAGINAGLQVQGRAAWTPRRDQAYLGVLVDDLITRGVTEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R+SLR DNAD RLT G LG + + R F + + LKS + Sbjct: 427 YRMFTSRAEFRLSLREDNADMRLTEAGRDLGVVDDARWDAFNRKRDAVSRETERLKSTWV 486 Query: 484 TSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLF----------SICPDARKFSS 530 L + + K + + + L P+ + + L ++ D + Sbjct: 487 NPAILPAADAEPVLGKGIEREYSLADLLRRPNVTYELLMGMQDGKYAPEALLADEPLLAE 546 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 + E+++I Y Y RQ E + + E +P DFDY + LS E+++KL+ KP Sbjct: 547 QIREQIEIGIKYHGYIARQADEVERLGANENTRLPADFDYKQVRGLSIEVQQKLAQHKPE 606 Query: 591 NLLQASKIEGMTPAALNLLLIYIKKNTVK 619 + QAS+I G+TPAA++LLL+++KK ++ Sbjct: 607 TIGQASRISGITPAAVSLLLVHLKKGVLR 635 >gi|168207743|ref|ZP_02633748.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium perfringens E str. JGS1987] gi|170660925|gb|EDT13608.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium perfringens E str. JGS1987] Length = 630 Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust. Identities = 270/615 (43%), Positives = 390/615 (63%), Gaps = 7/615 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYD++VIG GHAGCEA AA++G T + T ++ M CNP IGG KGHLVREIDA Sbjct: 7 SYDIVVIGAGHAGCEAGLAAARMGCKTLVCTLTLDSVAMMPCNPNIGGTAKGHLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG D IQ ++LN KGPAV R QAD++ Y+ M++ + +QENL + Q EV Sbjct: 67 LGGEMGVNIDHTFIQSKMLNTSKGPAVHSLRAQADKKKYQERMKKVLETQENLHLRQLEV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ ++ + C V++T+GT+L+ I IG + G G S +N L Sbjct: 127 VSVEVEDGKVKGVLTKNGAFFECKAVIMTSGTYLQSRIIIGDVSYSQGPNGLSNANELSK 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S + D R KTGTPAR++ +++ + K +Q DE +IPFSF++ I Q+ C +T Sbjct: 187 SLIDLGIDLRRFKTGTPARINKRSVDFSKMIEQPGDEEIIPFSFISGNIDRDQVSCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN ETH++I ENI S +Y+G IK GPRYCPSIEDK++RF +++ HQIF+EPEG +T+ Sbjct: 247 TNEETHKVIQENIHRSPMYNGSIKGVGPRYCPSIEDKVMRFQDKDRHQIFIEPEGDDTEE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+S++LPE++Q Q I+T+PGLE I+R YAIEYD I+P +L +LE K I G F Sbjct: 307 MYVGGMSSSLPEDVQVQMIKTVPGLENAEIMRTAYAIEYDCIDPTQLKASLEFKNIDGFF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQING++GYEEA AQG+VAGIN+A K D + +R+D Y+GV+IDDL +KG EPY Sbjct: 367 SAGQINGSSGYEEAGAQGIVAGINAALKVQGKDPMILTRSDGYVGVLIDDLITKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL--LKSLV 482 RM TSRAEYR+ LR DNAD RLT IG +G + E R +F + Q N R L LK L Sbjct: 427 RMMTSRAEYRLLLRQDNADFRLTEIGHNVGLVTEERWNKFQERKQ--NLERELERLKELQ 484 Query: 483 LTSK---NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 +T+K N + + K YE + P+ +L + P+ + +++ I Sbjct: 485 ITNKTENNEKIVELGSTELKKPIRMYELIKRPELDYFSLACLDPERPDLPKDIGDQINII 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + Y Y Q+ + + K EK+++P+D DY+ + +L E +KL+ ++P N+ QAS+I Sbjct: 545 ARYEGYIQTQLEQVAQFKKFEKKVLPEDLDYNDVNSLRIEAIQKLNKIRPLNIGQASRIS 604 Query: 600 GMTPAALNLLLIYIK 614 G++PA +++LLI+++ Sbjct: 605 GVSPADISVLLIFLE 619 >gi|171060863|ref|YP_001793212.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Leptothrix cholodnii SP-6] gi|205831529|sp|B1XYL1|MNMG_LEPCP RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|170778308|gb|ACB36447.1| glucose inhibited division protein A [Leptothrix cholodnii SP-6] Length = 685 Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust. Identities = 293/648 (45%), Positives = 390/648 (60%), Gaps = 33/648 (5%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNP+IGG+GKGHLV+E+D Sbjct: 5 QEFDVIVVGGGHAGTEAALAAARMGCDTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR+LN KGPAVR R QADR LY+ A+++ + +Q +L + Q Sbjct: 65 ALGGAMAAATDESGIQFRILNSSKGPAVRATRAQADRILYKAAIRQRLENQPHLWLFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + + V Q R TVVLT GTFL G IH+G PAGR GD P+ SL Sbjct: 125 VDDLMVEGDRVVGAVTQVGIRFRARTVVLTAGTFLDGKIHVGLNNYPAGRAGDPPAVSLS 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFAD-----------ERLIPFSFMTDK 232 + GRLKTGTP R+DG++I + K +Q D + FSF+ Sbjct: 185 ARLKELKLPQGRLKTGTPPRIDGRSIDFSKLIEQPGDGVAAADGTPASSPMPVFSFLGSA 244 Query: 233 ITN-RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGH 291 + RQ+ C IT TN TH I+ S +++G I+ GPRYCPSIEDKI RF ++N H Sbjct: 245 AQHPRQMPCWITNTNQRTHDILRTGFDRSPMFTGVIEGVGPRYCPSIEDKINRFADKNSH 304 Query: 292 QIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKEL 351 QIFLEPEGL T+ YPNGIST+LP +IQ +RT+ G+E I+RPGYAIEYDY +P+EL Sbjct: 305 QIFLEPEGLTTNEYYPNGISTSLPFDIQLAAVRTMLGMENAYILRPGYAIEYDYFDPREL 364 Query: 352 FPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 + E+K I GLF AGQINGTTGYEEAAAQGL AG N+A ++ + F R +Y+GV+ Sbjct: 365 KTSFESKAIGGLFFAGQINGTTGYEEAAAQGLYAGANAALQAQGNPPLSFGRDQAYLGVL 424 Query: 412 IDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEY 471 +DDL +KGV EPYRMFTSRAE+R+ LR DNAD RLT IG +G + + R F + Sbjct: 425 VDDLITKGVTEPYRMFTSRAEFRLQLREDNADMRLTEIGRSVGLVDDVRWDAFNRKRDAV 484 Query: 472 NFLRSLLKSLVLTSKNLSSTSISFKQDGKT----RTAYEFLSYPDFSIQNLFSICPDAR- 526 + LKS + L + S + GK + + P S + AR Sbjct: 485 SRETERLKSTWVHPAILPAAD-SERLFGKALEHEYNLADLMRRPGISYDTVAEALTIARP 543 Query: 527 ---------------KFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYS 571 ++ VIE+L+I YA Y +Q + + E +P + DY+ Sbjct: 544 GNYVSRETLNSQLGADLAAAVIEQLEIAIKYAGYIDKQNEDVQRAAHYEHLRLPDELDYA 603 Query: 572 SLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 + ALS E+++KL+ +P L QAS+I G+TPAAL+LLLI++K+ K Sbjct: 604 QVTALSFEVRQKLTKHRPETLGQASRISGVTPAALSLLLIHLKRGRFK 651 >gi|328780265|ref|XP_394417.4| PREDICTED: protein MTO1 homolog, mitochondrial-like isoform 1 [Apis mellifera] Length = 659 Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust. Identities = 286/631 (45%), Positives = 405/631 (64%), Gaps = 21/631 (3%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 +DVI+IGGGHAG EA A AA++GA T L+THK STIG MSCNP+ GG+GKG+L+REID Sbjct: 35 HKFDVIIIGGGHAGTEACAAAARMGAKTLLVTHKKSTIGEMSCNPSFGGIGKGNLMREID 94 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDG+ R+ D +GI + +LN KGPAV G R Q DR+LY+ +Q E+ + L + + Sbjct: 95 ALDGVCCRICDLSGINYTILNRSKGPAVWGYRAQIDRKLYKKHLQEELFNTPGLQICESS 154 Query: 124 VAGF--NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V + + I++++ + I VV+TTGTFL+G I+IG K PAGR+GD PS Sbjct: 155 VEDLIIHGDSPKCCGIILKNGTKIYSDAVVITTGTFLKGQINIGLEKRPAGRLGDEPSIG 214 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI---TNRQI 238 L N+ F GRLKTGTP R++ T+ + K + +F D+ PFSFM + + +Q+ Sbjct: 215 LANTLENIGFRMGRLKTGTPPRIEKSTVDFSKCDIRFPDKVSTPFSFMNETVWLPVEKQL 274 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C +T T + +II +N+ + + +I GPRYCPSIE KI++F + + H I+LEPE Sbjct: 275 NCYLTYTTEKVEKIIKDNMHCNLHITEEI--CGPRYCPSIESKILKF-KGHKHPIWLEPE 331 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL++ ++YP G+S LP E Q + I+ IP LE +++PGY +EYDYI+P+EL TLETK Sbjct: 332 GLDSPLIYPAGLSCTLPAEKQEELIKCIPALENAKMVKPGYGVEYDYIDPRELNVTLETK 391 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 K+ GLFLAGQINGTTGYEEAAAQG+VAG+N+A K + + SRT+ YIGV+IDDL ++ Sbjct: 392 KVPGLFLAGQINGTTGYEEAAAQGIVAGVNAAAKVLNKNLLIISRTEGYIGVLIDDLITQ 451 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYRMFTSRAEYR+ LRPDNAD RLT G ++GC+ E R K+ + + L Sbjct: 452 GTNEPYRMFTSRAEYRLVLRPDNADQRLTKKGYEIGCVSEERMKKTETILSKLEESIQLF 511 Query: 479 KSLVLTSKNLSSTSISFKQDGKT--RTAYEFLSYPDFSIQNLFSICPDARKF-----SSL 531 K+ V + + FK T ++A++ L SI + + PD +F S+ Sbjct: 512 KNEVHSDSKWKNL-FGFKHTKNTNVQSAFDLLRNNMISIDMIIKVLPD--RFGHLAQDSI 568 Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPA--LSNELKEKLSILKP 589 ++ER++IE+ YA E EI+ E+ +IP DY ++P LS E KEK S +KP Sbjct: 569 ILERIKIEAIYAPSIKGLQEEIDEIRKNEQMIIPSSIDY-NMPQLNLSIEEKEKFSEIKP 627 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKKNTVKL 620 + + A++I G+TP A+ L+ YI+KN + + Sbjct: 628 YTIAAATRISGITPCAILRLIHYIRKNELNI 658 >gi|168214842|ref|ZP_02640467.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium perfringens CPE str. F4969] gi|182626428|ref|ZP_02954181.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium perfringens D str. JGS1721] gi|170713742|gb|EDT25924.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium perfringens CPE str. F4969] gi|177908302|gb|EDT70855.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium perfringens D str. JGS1721] Length = 630 Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust. Identities = 270/615 (43%), Positives = 390/615 (63%), Gaps = 7/615 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYD++VIG GHAGCEA AA++G T + T ++ M CNP IGG KGHLVREIDA Sbjct: 7 SYDIVVIGAGHAGCEAGLAAARMGCKTLVCTLTLDSVAMMPCNPNIGGTAKGHLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG D IQ ++LN KGPAV R QAD++ Y+ M++ + +QENL + Q EV Sbjct: 67 LGGEMGVNIDHTFIQSKMLNTSKGPAVHSLRAQADKKKYQERMKKVLETQENLHLRQLEV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ ++ + C V++T+GT+L+ I IG + G G S +N L Sbjct: 127 VSVEVEDGKVKGVLTKNGAFFECKAVIMTSGTYLQSRIIIGDVSYSQGPNGLSNANELSK 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S + D R KTGTPAR++ +++ + K +Q DE +IPFSF++ I Q+ C +T Sbjct: 187 SLIDLGIDLRRFKTGTPARINKRSVDFSKMIEQPGDEEIIPFSFISGNIDRDQVSCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN ETH++I ENI S +Y+G IK GPRYCPSIEDK++RF +++ HQIF+EPEG +T+ Sbjct: 247 TNEETHKVIQENIHRSPMYNGSIKGVGPRYCPSIEDKVMRFQDKDRHQIFIEPEGDDTEE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+S++LPE++Q Q I+T+PGLE I+R YAIEYD I+P +L +LE K I G F Sbjct: 307 MYVGGMSSSLPEDVQVQMIKTVPGLENAEIMRTAYAIEYDCIDPTQLKASLEFKNIDGFF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQING++GYEEA AQG+VAGIN+A K D + +R+D Y+GV+IDDL +KG EPY Sbjct: 367 SAGQINGSSGYEEAGAQGIVAGINAALKVQGKDPMILTRSDGYVGVLIDDLITKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL--LKSLV 482 RM TSRAEYR+ LR DNAD RLT IG +G + E R +F + Q N R L LK L Sbjct: 427 RMMTSRAEYRLLLRQDNADFRLTEIGHNVGLVTEERWNKFQERKQ--NLERELERLKELQ 484 Query: 483 LTSK---NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 +T+K N + + K YE + P+ +L + P+ + +++ I Sbjct: 485 ITNKTENNEKIVELGSTELKKPIRMYELIKRPELDYFSLACLDPERPDLPKDIGDQINII 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + Y Y Q+ + + K EK+++P+D DY+ + +L E +KL+ ++P N+ QAS+I Sbjct: 545 ARYEGYIQTQLEQVAQFKKFEKKVLPEDLDYNDVNSLRIEAIQKLNKIRPLNIGQASRIS 604 Query: 600 GMTPAALNLLLIYIK 614 G++PA +++LLI+++ Sbjct: 605 GVSPADISVLLIFLE 619 >gi|18311636|ref|NP_563570.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium perfringens str. 13] gi|21263661|sp|Q8XH31|MNMG_CLOPE RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|18146320|dbj|BAB82360.1| glucose-inhibited division protein [Clostridium perfringens str. 13] Length = 630 Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust. Identities = 270/615 (43%), Positives = 390/615 (63%), Gaps = 7/615 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYD++VIG GHAGCEA AA++G T + T ++ M CNP IGG KGHLVREIDA Sbjct: 7 SYDIVVIGAGHAGCEAGLAAARMGCKTLVCTLTLDSVAMMPCNPNIGGTAKGHLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG D IQ ++LN KGPAV R QAD++ Y+ M++ + +QENL + Q EV Sbjct: 67 LGGEMGVNIDHTFIQSKMLNTSKGPAVHSLRAQADKKKYQERMKKVLETQENLHLRQLEV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ ++ + C V++T+GT+L+ I IG + G G S +N L Sbjct: 127 VSVEVEDGKVKGVLTKNGAFFECKAVIMTSGTYLQSRIIIGDVSYSQGPNGLSNANELSK 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S + D R KTGTPAR++ +++ + K +Q DE +IPFSF++ I Q+ C +T Sbjct: 187 SLIDLGIDLRRFKTGTPARINKRSVDFSKMIEQPGDEEIIPFSFISGNIDRDQVSCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN ETH++I ENI S +Y+G IK GPRYCPSIEDK++RF +++ HQIF+EPEG +T+ Sbjct: 247 TNEETHKVIQENIHRSPMYNGSIKGVGPRYCPSIEDKVMRFQDKDRHQIFIEPEGDDTEE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+S++LPE++Q Q I+T+PGLE I+R YAIEYD I+P +L +LE K I G F Sbjct: 307 MYVGGMSSSLPEDVQVQMIKTVPGLENAEIMRTAYAIEYDCIDPTQLKASLEFKNIDGFF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQING++GYEEA AQG+VAGIN+A K D + +R+D Y+GV+IDDL +KG EPY Sbjct: 367 SAGQINGSSGYEEAGAQGIVAGINAALKVQGKDPMILTRSDGYVGVLIDDLITKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL--LKSLV 482 RM TSRAEYR+ LR DNAD RLT IG +G + E R +F + Q N R L LK L Sbjct: 427 RMMTSRAEYRLLLRQDNADFRLTEIGHNVGLVTEERWNKFKERKQ--NLERELERLKELQ 484 Query: 483 LTSK---NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 +T+K N + + K YE + P+ +L + P+ + +++ I Sbjct: 485 ITNKTENNEKIVELGSTELKKPIRMYELIKRPELDYFSLACLDPERPDLPKDIGDQINII 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + Y Y Q+ + + K EK+++P+D DY+ + +L E +KL+ ++P N+ QAS+I Sbjct: 545 ARYEGYIQTQLEQVAQFKKFEKKVLPEDLDYNDVNSLRIEAIQKLNKIRPLNIGQASRIS 604 Query: 600 GMTPAALNLLLIYIK 614 G++PA +++LLI+++ Sbjct: 605 GVSPADISVLLIFLE 619 >gi|225620554|ref|YP_002721811.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Brachyspira hyodysenteriae WA1] gi|225215373|gb|ACN84107.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Brachyspira hyodysenteriae WA1] Length = 617 Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust. Identities = 280/614 (45%), Positives = 384/614 (62%), Gaps = 7/614 (1%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M N YDVIV+G GHAG EAA +A+LG T +I+ TIG MSCNP+IGG+ KG +V+ Sbjct: 1 MNNNKYDVIVVGAGHAGIEAALSSARLGMKTLIISINLDTIGQMSCNPSIGGVAKGTIVK 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G MG + D +QFR+LN KG AV PR QAD+ Y+ + + +Q NL + Sbjct: 61 EIDALGGEMGILIDKTMMQFRMLNRSKGKAVWAPRAQADKYAYKEEAAKTLYAQNNLTLH 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E N++ I + C V+LTTGTFL G+IHIGK + AGR+G+ P+ Sbjct: 121 QDIVTEIIVENNVLKGIKTERGREYECQAVILTTGTFLNGLIHIGKYQKQAGRIGELPAI 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 L +S + GRLKTGTPAR+D +I +D E Q D+ + PFSF+ +KI Q C Sbjct: 181 GLSDSLRSLGLEVGRLKTGTPARVDYYSINFDILEMQKGDDEITPFSFLDEKIDIVQEPC 240 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT T+ H+II +NI S +YSG I GPRYCPSIEDK+VRF ++ HQ+ LE E Sbjct: 241 YITYTDANIHKIIQDNIHLSPMYSGVITGIGPRYCPSIEDKVVRFADKPRHQLHLERESY 300 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T+ VY NG S++LPEE+Q + IR++ GLE+V I++P YA+EYDY+NP EL PTLETKKI Sbjct: 301 RTNEVYINGFSSSLPEEVQIKMIRSLKGLEEVRILKPAYAVEYDYVNPIELKPTLETKKI 360 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLFLAGQINGT+GYEEAA QGL+AGIN++ K K R+D YIGV+IDDLT+KG Sbjct: 361 EGLFLAGQINGTSGYEEAACQGLMAGINASLKIKKEAPFILKRSDGYIGVLIDDLTTKGT 420 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EP+RMFTS+AE+R+ LR DNAD RLT + +G + R ++ Q+ L L Sbjct: 421 KEPHRMFTSQAEHRMLLRQDNADERLTELSYNIGLASKERLEKVRDKKQKTQILVEYLNK 480 Query: 481 LVLTSKNLSSTSISFKQDGK---TRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 LT K + + F ++ K T + + P+ I L + ++ V+E + Sbjct: 481 RTLTQK--ETEDLGFTKEAKEYRTMSLASIIKRPECGIDMLKHLIDG--DYNKNVLENAE 536 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I Y Y R + E ++I+ E LIP+DFDYS+L ++ + KL KP+N+ QA + Sbjct: 537 IAIKYEGYIARYLNEIRDIEKYENMLIPEDFDYSTLKSVKIDAINKLKQYKPYNISQALR 596 Query: 598 IEGMTPAALNLLLI 611 I + + +++L++ Sbjct: 597 IPEVDKSVVHILIL 610 >gi|312876170|ref|ZP_07736157.1| glucose inhibited division protein A [Caldicellulosiruptor lactoaceticus 6A] gi|311796985|gb|EFR13327.1| glucose inhibited division protein A [Caldicellulosiruptor lactoaceticus 6A] Length = 632 Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust. Identities = 279/616 (45%), Positives = 389/616 (63%), Gaps = 10/616 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV V+G GHAG EAA +A+LG T + +IG+M CNP+IGG GKGHLVREIDAL Sbjct: 12 YDVAVVGAGHAGIEAALASARLGLKTIIFAINLDSIGNMPCNPSIGGTGKGHLVREIDAL 71 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ ADA IQ R+LN KGPAV R Q DR YRL M+R + +QENLD+ QGEV Sbjct: 72 GGEMGKAADATAIQVRILNRAKGPAVYSLRAQCDRSRYRLYMKRVLENQENLDIRQGEVC 131 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + ++ VVL TGTFL G + IG+ +G G P+ L + Sbjct: 132 EIIVEDGRVKGVKITTGAIFLAKAVVLATGTFLGGRVIIGETVYDSGPDGMHPARYLTEN 191 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNRQIECGITR 244 K + R KTGTPAR+ +++ + K + Q DE+ +PFSF D Q+ C +T Sbjct: 192 LKKLGIEMMRFKTGTPARVHRRSLDFSKMQIQPGDEKPLPFSFENEDNFNIDQVPCYLTY 251 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETHRII EN+ + +++G I GPRYCPSIEDK+VRF ++ HQ+F+EP GL+TD Sbjct: 252 TTEETHRIIRENLHRAPLFTGLISGIGPRYCPSIEDKVVRFADKPRHQVFIEPTGLDTDE 311 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+ST+LPE++Q + R++ GLE V I+RP YAIEYD INP +L PTL+ KKI GLF Sbjct: 312 MYVQGMSTSLPEDVQVKMYRSVIGLENVKIMRPAYAIEYDCINPLQLEPTLQFKKIKGLF 371 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAAAQG++AGIN+A + + R+ +YIGV+IDDL +KG EPY Sbjct: 372 SAGQINGTSGYEEAAAQGIIAGINAAMYVKGKEMLILDRSQAYIGVLIDDLVTKGTNEPY 431 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLR---SLLKSL 481 R+ TSRAEYR+ LR DNAD RLT IG K+G I Q+R+ K++Q+ + + +K+ Sbjct: 432 RIMTSRAEYRLILRQDNADLRLTEIGYKIGLIS---QQRYEKFLQKKKMIEDEINRVKNT 488 Query: 482 VLTSKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 V+ + + K T + L P+ S ++L I P V + ++I Sbjct: 489 VIAPSEKVNKFLQEKGSSPITTGVKLSDLLKRPELSYEDLKEIDPARPDLPWYVQDEVEI 548 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E Y Y +Q+ + ++ K E + IP+ DYS + LS E K+KLS ++P ++ QAS+I Sbjct: 549 EIKYEGYIKKQLAQIEQFKKLENKKIPEWVDYSQILGLSTEAKQKLSQIRPASIGQASRI 608 Query: 599 EGMTPAALNLLLIYIK 614 G++PA +++LLI+++ Sbjct: 609 SGVSPADISVLLIWLE 624 >gi|237809878|ref|YP_002894318.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Tolumonas auensis DSM 9187] gi|259495855|sp|C4LDX1|MNMG_TOLAT RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|237502139|gb|ACQ94732.1| glucose inhibited division protein A [Tolumonas auensis DSM 9187] Length = 629 Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust. Identities = 280/623 (44%), Positives = 396/623 (63%), Gaps = 19/623 (3%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DA Sbjct: 6 QFDVIVVGGGHAGTEAATAAARMGMKTLLLTHNIETLGHMSCNPAIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 + G+M + D AGIQFR+LN KGPAVR R QADR LY+ ++ + + NL + Q Sbjct: 66 MGGIMAQAIDHAGIQFRILNSSKGPAVRATRAQADRLLYKQTIRHTLENYPNLQLFQQAC 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + +V Q I TVVLT GTFL G+IHIG GR GD S +L Sbjct: 126 DDLILEGDRVCGVVTQAGIRILSKTVVLTAGTFLNGLIHIGMEHYRGGRSGDPASVTLAE 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 + GRLKTGTP R+D +++ + + + Q D+ + FS++ + RQ+ C IT Sbjct: 186 RMREMPLRVGRLKTGTPPRIDARSVDFSQLQMQLGDDPVPVFSYLGKPEQHPRQVPCFIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN++TH +I N+ S +Y+G I+ GPRYCPSIEDKI+RF +++ HQIF+EPEGL T Sbjct: 246 HTNVQTHDVIRANLDRSPMYAGVIEGIGPRYCPSIEDKIMRFADKDAHQIFIEPEGLTTH 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q Q +R++ G +I RPGYAIEYD+ +P++L P +E K + L Sbjct: 306 ELYPNGISTSLPFDVQVQIVRSMKGFANAHIARPGYAIEYDFFDPRDLKPNMENKCLQNL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQG++AGIN+A ++ D R +YIGV++DDL++ G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGMLAGINAALRAQDKDPWAPRRDQAYIGVLMDDLSTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLTP+G +LG + + R F ++ + L+ + Sbjct: 426 YRMFTSRAEYRLLLREDNADLRLTPVGRELGLVNDERWAFFNHKLEMMAQEQQRLQDTWI 485 Query: 484 TSKNLSSTSIS-FKQDGKTRTAY--EFLSYPDFSIQNLFSI--------CPDARKFSSLV 532 ++ ++ ++ + +R A + L P+ + Q+L +I P A Sbjct: 486 QPQHPATEGLNKILKTPLSRPASLEDLLRRPEVNYQDLMAIEGVGPGIEHPQAS------ 539 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 E+++I+ YA Y RQ E + E+ L+P D DYS +P LS E+ KL+ KP + Sbjct: 540 -EQIEIQVKYAGYIDRQQDEIDKQLRHEETLLPLDLDYSEVPGLSKEVCIKLNDTKPQTI 598 Query: 593 LQASKIEGMTPAALNLLLIYIKK 615 QAS+I G+TPAA+++LL+++KK Sbjct: 599 GQASRISGVTPAAISILLVHLKK 621 >gi|110802913|ref|YP_699903.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium perfringens SM101] gi|123145822|sp|Q0SPQ4|MNMG_CLOPS RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|110683414|gb|ABG86784.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium perfringens SM101] Length = 630 Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust. Identities = 270/615 (43%), Positives = 390/615 (63%), Gaps = 7/615 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYD++VIG GHAGCEA AA++G T + T ++ M CNP IGG KGHLVREIDA Sbjct: 7 SYDIVVIGAGHAGCEAGLAAARMGCKTLVCTLTLDSVAMMPCNPNIGGTAKGHLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG D IQ ++LN KGPAV R QAD++ Y+ M++ + +QENL + Q EV Sbjct: 67 LGGEMGVNIDHTFIQSKMLNTSKGPAVHSLRAQADKKKYQERMKKVLETQENLHLRQLEV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ ++ + C V++T+GT+L+ I IG + G G S +N L Sbjct: 127 VSVEVEDGKVKGVLTKNGAFFECKAVIMTSGTYLQSRIIIGDVSYSQGPNGLSNANELSK 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S + D R KTGTPAR++ +++ + K +Q DE +IPFSF++ I Q+ C +T Sbjct: 187 SLIDLGIDLRRFKTGTPARVNKRSVDFSKMIEQPGDEEIIPFSFISGNIDRDQVSCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN ETH++I ENI S +Y+G IK GPRYCPSIEDK++RF +++ HQIF+EPEG +T+ Sbjct: 247 TNEETHKVIQENIHRSPMYNGSIKGVGPRYCPSIEDKVMRFQDKDRHQIFIEPEGDDTEE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+S++LPE++Q Q I+T+PGLE I+R YAIEYD I+P +L +LE K I G F Sbjct: 307 MYVGGMSSSLPEDVQVQMIKTVPGLENAEIMRTAYAIEYDCIDPTQLKASLEFKNIDGFF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQING++GYEEA AQG+VAGIN+A K D + +R+D Y+GV+IDDL +KG EPY Sbjct: 367 SAGQINGSSGYEEAGAQGIVAGINAALKVQGKDPMILTRSDGYVGVLIDDLITKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL--LKSLV 482 RM TSRAEYR+ LR DNAD RLT IG +G + E R +F + Q N R L LK L Sbjct: 427 RMMTSRAEYRLLLRQDNADFRLTEIGHNVGLVTEERWNKFQERKQ--NLERELERLKELQ 484 Query: 483 LTSK---NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 +T+K N + + K YE + P+ +L + P+ + +++ I Sbjct: 485 ITNKTENNEKIVELGSTELKKPIRMYELIKRPELDYFSLACLDPERPDLPKDIGDQINII 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + Y Y Q+ + + K EK+++P+D DY+ + +L E +KL+ ++P N+ QAS+I Sbjct: 545 ARYEGYIQTQLEQVAQFKKFEKKVLPEDLDYNDVNSLRIEAIQKLNKIRPLNIGQASRIS 604 Query: 600 GMTPAALNLLLIYIK 614 G++PA +++LLI+++ Sbjct: 605 GVSPADISVLLIFLE 619 >gi|218962059|ref|YP_001741834.1| glucose-inhibited division protein A [Candidatus Cloacamonas acidaminovorans] gi|167730716|emb|CAO81628.1| glucose-inhibited division protein A [Candidatus Cloacamonas acidaminovorans] Length = 615 Score = 530 bits (1364), Expect = e-148, Method: Compositional matrix adjust. Identities = 284/625 (45%), Positives = 385/625 (61%), Gaps = 24/625 (3%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 + +D+IV+G GH+G EA+ AAK G AL T K IG MSCNP+IGG KGHL REI Sbjct: 4 DNKFDLIVVGAGHSGIEASLAAAKRGLKVALFTIKIEAIGRMSCNPSIGGPAKGHLAREI 63 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G + + AD +GI FR+LN KGPAV PR+Q DR+ Y L M+ + QEN+ +I+ Sbjct: 64 DALGGELAKSADLSGIHFRMLNRSKGPAVWAPRSQNDRQKYHLLMREAVEKQENIHLIEA 123 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 + E + ++ Q ++L TGTFL+G IHIGK+ GR G+ L Sbjct: 124 TIEEIIVENGCVKGVISQIGHCYYAPKIILATGTFLQGKIHIGKISYAGGRSGEPSVEYL 183 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGI 242 S + R KTGTP R+D +++ ++K E+Q DE FSF D + C I Sbjct: 184 SRSLSAWGLKVRRFKTGTPPRVDLRSVNYNKLEEQKGDENPQGFSFYRDIEIKNLVSCYI 243 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T T ETH+II N+ SA+YSG IK GPRYCPSIEDKIV+F +R H IF+EPEGLNT Sbjct: 244 THTTEETHQIIRANLTESALYSGIIKGIGPRYCPSIEDKIVKFPQRESHHIFIEPEGLNT 303 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 Y NGIST+LP EIQ + + +IPGLE+ I+R YAIEYD+I+P+E+ +L+ KKI G Sbjct: 304 FEGYVNGISTSLPAEIQEKIVHSIPGLEEARILRYAYAIEYDFIDPEEIDSSLQCKKIKG 363 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+LAGQINGT+GYEEAAAQGL+AGIN++ + + R+++YIGV+IDDL ++G E Sbjct: 364 LYLAGQINGTSGYEEAAAQGLLAGINASLALENKEPLILKRSEAYIGVLIDDLVTRGTNE 423 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL- 481 PYRMFTSRAEYR+ LR DNAD RL P+G KLG + E R +RF +Q LR LK L Sbjct: 424 PYRMFTSRAEYRLLLRQDNADERLMPVGYKLGLVEESRWQRF---LQMQEILRRELKYLK 480 Query: 482 ---VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNL----FSICPDARKFSSLVIE 534 L + + I F Q L P+ S +L + I D +S + Sbjct: 481 QHNCLPNGEIKEP-IRFAQ---------LLKRPEISFNDLQNYGYKIPADV---NSDIQN 527 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 RL++E Y+ Y R E ++ + E IP++ DY S+P+L+ E +EKLS ++P N+ Q Sbjct: 528 RLELEIKYSGYLNRMEEEIQKFQNAETIAIPEEMDYFSIPSLAYEAREKLSKIRPKNIGQ 587 Query: 595 ASKIEGMTPAALNLLLIYIKKNTVK 619 A +I G+ + L+I+++KN K Sbjct: 588 AMRIPGINYSDSVALMIWLRKNAKK 612 >gi|326202765|ref|ZP_08192632.1| glucose inhibited division protein A [Clostridium papyrosolvens DSM 2782] gi|325986842|gb|EGD47671.1| glucose inhibited division protein A [Clostridium papyrosolvens DSM 2782] Length = 627 Score = 530 bits (1364), Expect = e-148, Method: Compositional matrix adjust. Identities = 279/618 (45%), Positives = 398/618 (64%), Gaps = 10/618 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYD+ VIG GHAGCEAA AA+LG ST + + +I +M CNP+IGG KGHLVREIDA Sbjct: 7 SYDIAVIGAGHAGCEAALAAARLGCSTIVFSINLDSIANMPCNPSIGGTAKGHLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ ++LN KGPAV R Q DR Y++ M+ + +QENLD+ Q EV Sbjct: 67 LGGQMGKTTDKTFIQSKILNSSKGPAVYSLRAQVDRRQYQMEMKHILETQENLDIRQAEV 126 Query: 125 AGFNTEKN--IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 T++ ++ + ++ +C +VLTTGT+L+G I IG + G G P+N L Sbjct: 127 IEVLTDETGTSVTGVKTHTGAIFQCKAIVLTTGTYLQGKIFIGDVNYSGGPDGLFPANRL 186 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGI 242 S + R KTGTPARL+ +++ + K +Q D+ ++PFSF T+KI Q+ C + Sbjct: 187 SESLQNIGIELLRFKTGTPARLNKRSLDFSKMSEQPGDDVIVPFSFETEKIEKDQVPCWL 246 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH +I +NI S +YSG+I GPRYCPSIEDK+VRF ++ HQ+F+EP G+ T Sbjct: 247 TYTNADTHEVIKKNIHRSPLYSGNITGIGPRYCPSIEDKVVRFSDKEHHQVFVEPMGIGT 306 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + +Y G+S++LPE++Q +F+RTIPGLE V ++R YAIEYD I+ +L +LE KKI G Sbjct: 307 EEMYLQGMSSSLPEDVQVEFMRTIPGLENVKVMRSAYAIEYDGIDATQLKLSLEYKKIEG 366 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQING++GYEEAAAQG+VAGIN+A K + + R+ +YIGV+IDDL +KG E Sbjct: 367 LFSAGQINGSSGYEEAAAQGIVAGINAAMKIQNREPLILDRSQAYIGVLIDDLVTKGTKE 426 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRM TSRAEYR+ LR DNAD RLT +G ++G I E R ++F K + LK+ Sbjct: 427 PYRMMTSRAEYRLLLRQDNADLRLTSLGREIGLISEERYEKFLKKKELIEKEIERLKNTY 486 Query: 483 LTS-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 L K L S + + + G T E L P+ S ++L +C + + V E+++ Sbjct: 487 LPPSEAVLKYLESRNSTAIKSGIQVT--ELLRRPEISYESLSQVC-ELPELPRAVREQVE 543 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 + Y Y RQM + ++ K E R IP+ DY+ + L E ++KLS ++P ++ QAS+ Sbjct: 544 VAVKYEGYIKRQMQQVEQYKKLEGRKIPQPIDYNEIQGLRLEARQKLSQIRPDSIGQASR 603 Query: 598 IEGMTPAALNLLLIYIKK 615 I G++PA +++LLIY+++ Sbjct: 604 ITGVSPADISVLLIYLEQ 621 >gi|303256377|ref|ZP_07342391.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderiales bacterium 1_1_47] gi|302859868|gb|EFL82945.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderiales bacterium 1_1_47] Length = 649 Score = 530 bits (1364), Expect = e-148, Method: Compositional matrix adjust. Identities = 290/623 (46%), Positives = 385/623 (61%), Gaps = 14/623 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 Y+VIV+GGG+AG EAAA A++ A T L+TH +G SCNP+IGG+GK HLV+E+DAL Sbjct: 22 YEVIVVGGGNAGIEAAAACARMKAKTLLVTHNLDNLGQQSCNPSIGGIGKSHLVKEVDAL 81 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGL+ + D +GIQFRVLN KG AVR R Q DR LY+ M+ I + ENL +I+ V Sbjct: 82 DGLIAKATDFSGIQFRVLNASKGAAVRATRAQIDRRLYKYQMRTRIEAIENLSLIEEAVD 141 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E ++ + ++ I+ VVL GTFL G + IG+ AGR GD S +L + Sbjct: 142 ALLLENGKVAGVYLRSGISIKAKAVVLCAGTFLNGKVFIGQTSYLAGRSGDPSSVNLGIN 201 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFM-TDKITNRQIECGIT 243 + RLKTGTPARLDG+TI + K E+Q D +P FS+M + + +Q+ C IT Sbjct: 202 LAELGLPKARLKTGTPARLDGRTIDFSKCERQLGDSEPVPVFSYMGSPEDHPQQVPCWIT 261 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH I + + S +++G I+ GPRYCPSIEDKI +F +N H +FLEPEGLNT Sbjct: 262 DTNQTTHDFIRKGLDRSPLFTGVIEGIGPRYCPSIEDKIHKFASKNSHHVFLEPEGLNTY 321 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP ++Q FI +I GLE V+IIRPGYAIEYDY +P L LE+K+ L Sbjct: 322 EYYPNGISTSLPYDVQVNFIHSIKGLENVHIIRPGYAIEYDYYDPTHLKDNLESKEFDNL 381 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 FLAGQ+NGTTGYEEAAAQGL+AGIN+ K + R +Y+GVM++DL +KGV EP Sbjct: 382 FLAGQVNGTTGYEEAAAQGLMAGINAVLKIRDEEPFLLRRDQAYLGVMVNDLITKGVNEP 441 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLT IG KLG + E R K F + + LKS+ + Sbjct: 442 YRMFTSRAEYRLSLREDNADERLTEIGYKLGVVSEERWKFFQEKRERLARETERLKSIWV 501 Query: 484 TSKNLSSTSIS---FKQDGKTRTAYEFLSYPDFSIQNL--------FSICPDARKFSSLV 532 L S+ + K Y L P+ Q L S+ P S Sbjct: 502 NPGVLDKFSLEEVVGAELSKESQLYVMLKRPEVDYQKLKLLKTKDGESLLPPPY-LSDED 560 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 E L + Y+ Y +Q E ++ + + +IP+DFDY S LS E+ +KL +KP L Sbjct: 561 AETLTTKVKYSGYEDKQKAEVQKNLEKIETVIPEDFDYDSAKGLSFEITQKLKKIKPRTL 620 Query: 593 LQASKIEGMTPAALNLLLIYIKK 615 +A I G+TPAA+++LL+Y+K+ Sbjct: 621 GEALNISGVTPAAISILLVYLKR 643 >gi|168218050|ref|ZP_02643675.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium perfringens NCTC 8239] gi|182379932|gb|EDT77411.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium perfringens NCTC 8239] Length = 630 Score = 530 bits (1364), Expect = e-148, Method: Compositional matrix adjust. Identities = 270/615 (43%), Positives = 390/615 (63%), Gaps = 7/615 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYD++VIG GHAGCEA AA++G T + T ++ M CNP IGG KGHLVREIDA Sbjct: 7 SYDIVVIGAGHAGCEAGLAAARMGCKTLVCTLTLDSVAMMPCNPNIGGTAKGHLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG D IQ ++LN KGPAV R QAD++ Y+ M++ + +QENL + Q EV Sbjct: 67 LGGEMGVNIDHTFIQSKMLNTSKGPAVHSLRAQADKKKYQERMKKVLETQENLHLRQLEV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ ++ + C V++T+GT+L+ I IG + G G S +N L Sbjct: 127 VSVEVEDGKVKGVLTKNGAFFECKAVIMTSGTYLQSRIIIGDVSYSQGPNGLSNANELSK 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S + D R KTGTPAR++ +++ + K +Q DE +IPFSF++ I Q+ C +T Sbjct: 187 SLIDLGIDLRRFKTGTPARINKRSVDFSKMIEQPGDEEIIPFSFISGNIDRDQVSCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN ETH++I ENI S +Y+G IK GPRYCPSIEDK++RF +++ HQIF+EPEG +T+ Sbjct: 247 TNEETHKVIQENIHRSPMYNGSIKGVGPRYCPSIEDKVMRFQDKDRHQIFIEPEGDDTEE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+S++LPE++Q Q I+T+PGLE I+R YAIEYD I+P +L +LE K I G F Sbjct: 307 MYVGGMSSSLPEDVQVQMIKTVPGLENAEIMRTAYAIEYDCIDPTQLKASLEFKNIDGFF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQING++GYEEA AQG+VAGIN+A K D + +R+D Y+GV+IDDL +KG EPY Sbjct: 367 SAGQINGSSGYEEAGAQGIVAGINAALKVQGKDPMILTRSDGYVGVLIDDLITKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL--LKSLV 482 RM TSRAEYR+ LR DNAD RLT IG +G + E R +F + Q N R L LK L Sbjct: 427 RMMTSRAEYRLLLRQDNADFRLTEIGYNVGLVTEERWNKFQERKQ--NLERELERLKELQ 484 Query: 483 LTSK---NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 +T+K N + + K YE + P+ +L + P+ + +++ I Sbjct: 485 ITNKTENNEKIVELGSTELKKPIRMYELIKRPELDYFSLACLDPERPDLPKDIGDQINII 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + Y Y Q+ + + K EK+++P+D DY+ + +L E +KL+ ++P N+ QAS+I Sbjct: 545 ARYEGYIQTQLEQVAQFKKFEKKVLPEDLDYNDVNSLRIEAIQKLNKIRPLNIGQASRIS 604 Query: 600 GMTPAALNLLLIYIK 614 G++PA +++LLI+++ Sbjct: 605 GVSPADISVLLIFLE 619 >gi|110801428|ref|YP_697345.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium perfringens ATCC 13124] gi|168211558|ref|ZP_02637183.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium perfringens B str. ATCC 3626] gi|169343452|ref|ZP_02864452.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium perfringens C str. JGS1495] gi|123148451|sp|Q0TLZ5|MNMG_CLOP1 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|110676075|gb|ABG85062.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium perfringens ATCC 13124] gi|169298404|gb|EDS80493.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium perfringens C str. JGS1495] gi|170710449|gb|EDT22631.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium perfringens B str. ATCC 3626] Length = 630 Score = 530 bits (1364), Expect = e-148, Method: Compositional matrix adjust. Identities = 270/615 (43%), Positives = 390/615 (63%), Gaps = 7/615 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYD++VIG GHAGCEA AA++G T + T ++ M CNP IGG KGHLVREIDA Sbjct: 7 SYDIVVIGAGHAGCEAGLAAARMGCKTLVCTLTLDSVAMMPCNPNIGGTAKGHLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG D IQ ++LN KGPAV R QAD++ Y+ M++ + +QENL + Q EV Sbjct: 67 LGGEMGVNIDHTFIQSKMLNTSKGPAVHSLRAQADKKKYQERMKKVLETQENLHLRQLEV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ ++ + C V++T+GT+L+ I IG + G G S +N L Sbjct: 127 VSVEVEDGKVKGVLTKNGAFFECKAVIMTSGTYLQSRIIIGDVSYSQGPNGLSNANELSK 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S + D R KTGTPAR++ +++ + K +Q DE +IPFSF++ I Q+ C +T Sbjct: 187 SLIDLGIDLRRFKTGTPARINKRSVDFSKMIEQPGDEEIIPFSFISGNIDRDQVSCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN ETH++I ENI S +Y+G IK GPRYCPSIEDK++RF +++ HQIF+EPEG +T+ Sbjct: 247 TNEETHKVIQENIHRSPMYNGSIKGVGPRYCPSIEDKVMRFQDKDRHQIFIEPEGDDTEE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+S++LPE++Q Q I+T+PGLE I+R YAIEYD I+P +L +LE K I G F Sbjct: 307 MYVGGMSSSLPEDVQVQMIKTVPGLENAEIMRTAYAIEYDCIDPTQLKASLEFKNIDGFF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQING++GYEEA AQG+VAGIN+A K D + +R+D Y+GV+IDDL +KG EPY Sbjct: 367 SAGQINGSSGYEEAGAQGIVAGINAALKVQGKDPMILTRSDGYVGVLIDDLITKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL--LKSLV 482 RM TSRAEYR+ LR DNAD RLT IG +G + E R +F + Q N R L LK L Sbjct: 427 RMMTSRAEYRLLLRQDNADFRLTEIGHNVGLVTEERWSKFQERKQ--NLERELERLKELQ 484 Query: 483 LTSK---NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 +T+K N + + K YE + P+ +L + P+ + +++ I Sbjct: 485 ITNKTENNEKIVELGSTELKKPIRMYELIKRPELDYFSLACLDPERPDLPKDIGDQINII 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + Y Y Q+ + + K EK+++P+D DY+ + +L E +KL+ ++P N+ QAS+I Sbjct: 545 ARYEGYIQTQLEQVAQFKKFEKKVLPEDLDYNDVNSLRIEAIQKLNKIRPLNIGQASRIS 604 Query: 600 GMTPAALNLLLIYIK 614 G++PA +++LLI+++ Sbjct: 605 GVSPADISVLLIFLE 619 >gi|288817518|ref|YP_003431865.1| glucose inhibited division protein A [Hydrogenobacter thermophilus TK-6] gi|288786917|dbj|BAI68664.1| glucose inhibited division protein A [Hydrogenobacter thermophilus TK-6] gi|308751121|gb|ADO44604.1| glucose inhibited division protein A [Hydrogenobacter thermophilus TK-6] Length = 614 Score = 529 bits (1363), Expect = e-148, Method: Compositional matrix adjust. Identities = 293/622 (47%), Positives = 394/622 (63%), Gaps = 17/622 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M+ +DV+VIGGGHAG EAA +A++GA T + TIG MSCNPAIGG+ KG +VR Sbjct: 1 MLVDEFDVVVIGGGHAGIEAALASARMGAKTVMFVLNADTIGQMSCNPAIGGIAKGIVVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G MG+ D+ GIQF++LN +KG AV PR QAD++LYR M++ QENL + Sbjct: 61 EIDALGGEMGKAIDSTGIQFKMLNTRKGKAVWSPRAQADKKLYREYMKKVCERQENLYIK 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q EV + N + ++ + + TVV+TTGTFL G I+IG PAGR + S Sbjct: 121 QDEVVDIIVKDNRVVAVKTKLGLEYKTKTVVVTTGTFLNGTIYIGDKTFPAGRAWEPRSE 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN----- 235 L + + F R KTGTPARLDG+TI + E D+ FSF T+ + Sbjct: 181 GLAEFYKRHGFPLMRFKTGTPARLDGRTIDYSGLEIAPGDDPPPKFSFWTEPVGTYWFPK 240 Query: 236 --RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQI 293 QI C IT T +TH II +N+ +A+Y G IK GPRYCPSIEDK+V+F +++ HQ+ Sbjct: 241 GKEQINCYITYTTPKTHEIIRKNLHRTALYGGLIKGIGPRYCPSIEDKVVKFPDKDRHQV 300 Query: 294 FLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFP 353 FLEPEGL+T VYPNG+ST+LPEEIQ + R+IPGLE V +IRP YAIEYD + P EL+P Sbjct: 301 FLEPEGLDTIEVYPNGLSTSLPEEIQWELYRSIPGLENVELIRPAYAIEYDVVPPTELYP 360 Query: 354 TLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMID 413 TLETKKI GLF AG NGTTGYEEAA QG+VAGIN+A ++ + I R +SYIG+MID Sbjct: 361 TLETKKIRGLFHAGNFNGTTGYEEAAGQGIVAGINAALRAFGKEPIYLRRDESYIGIMID 420 Query: 414 DLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNF 473 DLT+KGVLEPYR+FTSR+EYR+ LR DNA RL+ +G +LG + + + K + ++ Sbjct: 421 DLTTKGVLEPYRLFTSRSEYRLHLRQDNAILRLSKLGYELGLLTQDQYKIIKELQRQIEE 480 Query: 474 LRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVI 533 S KS T+++ + K+ T + L+ DF++ +L + D V Sbjct: 481 WMSFYKS--------QRTALAIGSEVKSYTPSQLLT-SDFTLDDLKTFGFDVPT-HPFVK 530 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E ++IE Y Y R++ + +K E IP+D DY + +S E KEKL +P + Sbjct: 531 EVVEIELKYEPYMERELKINERLKKLEDVKIPEDLDYDKIQGISKEAKEKLKRFRPITVG 590 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I+G+TPA + LL Y+ K Sbjct: 591 QASRIDGITPATITSLLAYLGK 612 >gi|315644289|ref|ZP_07897459.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Paenibacillus vortex V453] gi|315280664|gb|EFU43953.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Paenibacillus vortex V453] Length = 628 Score = 529 bits (1363), Expect = e-148, Method: Compositional matrix adjust. Identities = 274/617 (44%), Positives = 391/617 (63%), Gaps = 12/617 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAGCEAA +A++GA T ++T + M CNP+IGG KGH+VREIDA Sbjct: 7 TYDVIVVGAGHAGCEAALASARMGAETLMVTINLDMVAFMPCNPSIGGPAKGHVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAV R QAD+ Y+ M+ + +E L + QG V Sbjct: 67 LGGEMGRNIDKTFIQMRMLNTGKGPAVHALRAQADKFSYQHTMKETMEKEEKLTLRQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + I+ Q + R VVLTTGT+LRG + +G+L +G PS L + Sbjct: 127 DQLIVEDGVCVGILTQTGTEYRAKAVVLTTGTYLRGKVIMGELMYESGPNNQQPSVKLAH 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + + FD R KTGTP R+ TI + KTE Q D++ FS+ T N Q+ C +T Sbjct: 187 NLRELGFDLVRFKTGTPPRVHKDTIDFSKTEIQPGDDKPKFFSYETKSSDNEQLPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+++TH+II +N+ + ++SG I+ GPRYCPSIEDKIVRF ++ HQIFLEPEG NT Sbjct: 247 TSVDTHQIINDNLHRAPMFSGIIEGTGPRYCPSIEDKIVRFADKPKHQIFLEPEGKNTKE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 Y G+ST+LPE++Q +R+IPG+EKV ++R GYAIEYD + P +L+P+LETKK+ GLF Sbjct: 307 YYVQGLSTSLPEDVQLAVLRSIPGMEKVEMMRNGYAIEYDAMVPTQLWPSLETKKLPGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QG++AGIN+ARK + + R+ YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGIMAGINAARKVQDKEPVVLDRSQGYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL--- 481 R+ TSRAEYR+ LR DNAD RLT IG +G I E +R+AK++Q+ + ++ L Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEIGHDIGLISE---ERYAKFLQKKQLVEQEIERLRQA 483 Query: 482 ----VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 V + L + + DG L P+ S + S+ P + E+++ Sbjct: 484 KVKPVEVNATLEAAGSAPIVDGSNLLT--ILRRPEVSFAMIESLSPSPYDLDEDMKEQVE 541 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ YA Y +Q+ ++++ EK+ IP+D Y + L+ E ++KL+ ++P ++ QAS+ Sbjct: 542 IQIKYAGYIEKQLGHVEKLQKMEKKRIPEDIVYDDINGLAMEARQKLNKIRPISIGQASR 601 Query: 598 IEGMTPAALNLLLIYIK 614 I G+TPA +++LL+Y++ Sbjct: 602 IAGVTPADISILLVYLE 618 >gi|222152197|ref|YP_002561357.1| glucose-inhibited division protein A [Macrococcus caseolyticus JCSC5402] gi|259495848|sp|B9E8Z3|MNMG_MACCJ RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|222121326|dbj|BAH18661.1| glucose-inhibited division protein A [Macrococcus caseolyticus JCSC5402] Length = 624 Score = 529 bits (1363), Expect = e-148, Method: Compositional matrix adjust. Identities = 282/623 (45%), Positives = 391/623 (62%), Gaps = 7/623 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + + YDVIV+G GHAG EA +A+ GA T ++T ++ M CNP++GG KG +VRE Sbjct: 1 MEQKYDVIVVGAGHAGVEAGLASARKGAKTLMLTINLDSVAFMPCNPSVGGPAKGIVVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+ I +Q+NLD++Q Sbjct: 61 IDALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKSVIEAQDNLDIMQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G V E + + + VVLTTGTFLRG I +G +K +G PS Sbjct: 121 GMVERLIIEDGKVLGVETVIGTTYLADAVVLTTGTFLRGEIILGNIKYSSGPNHQMPSIK 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L + + FD R KTGTP R++ +I + KTE Q D+ FS+ T + Q+ C Sbjct: 181 LADHLREIGFDIVRFKTGTPPRVNSDSIDYSKTEIQPGDDLPRAFSYETTEFIMDQLPCW 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN ETH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQIFLEPEG N Sbjct: 241 LTYTNGETHQVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQIFLEPEGRN 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T VY G+ST+LPE +Q Q ++TIPGLEK +++R GYAIEYD I P +L+PTLETKKI Sbjct: 301 TKEVYVQGLSTSLPEHVQLQMLKTIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKKIQ 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GL+ AGQINGT+GYEEAA QGL+AGIN+A K D + R ++YIGV+IDDL +KG Sbjct: 361 GLYTAGQINGTSGYEEAAGQGLMAGINAAAKVLGHDELILGRHEAYIGVLIDDLVTKGTN 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF----AKYIQEYNFLRSL 477 EPYR+ TSRAE+R+ LR DNAD RLT IG G I E R RF A +E N L + Sbjct: 421 EPYRLLTSRAEHRLLLRHDNADLRLTEIGYNAGLIDEFRYSRFNNKKAAISEEINRLSQI 480 Query: 478 -LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 +K T + S + +DG A + L P+ ++ ++ + V E++ Sbjct: 481 RIKPNEKTQSMIESRGGTPLKDGI--LAIDLLRRPEMDYASVVALIEEQGMIDESVQEQV 538 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I++ Y Y + + + +++K E + IP++ DY + +L+ E +EKL +KP ++ QAS Sbjct: 539 EIQTKYEGYIQKSLQQVEKVKRMENKKIPENIDYDDIHSLATEAREKLKEVKPLSIAQAS 598 Query: 597 KIEGMTPAALNLLLIYIKKNTVK 619 +I G+ PA +++LLIYI++ +K Sbjct: 599 RISGVNPADISILLIYIEQGKIK 621 >gi|56965873|ref|YP_177607.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus clausii KSM-K16] gi|81170520|sp|Q5WAG4|MNMG_BACSK RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|56912119|dbj|BAD66647.1| glucose inhibited division protein A [Bacillus clausii KSM-K16] Length = 629 Score = 529 bits (1363), Expect = e-148, Method: Compositional matrix adjust. Identities = 277/620 (44%), Positives = 390/620 (62%), Gaps = 14/620 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIVIG GHAG EA AA++GA+T ++T + M CNP++GG KG +VREIDA Sbjct: 7 TFDVIVIGAGHAGVEAGLAAARMGANTLMLTLNLDAVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ M+R I QENL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFRYQQEMKRTIEEQENLLLRQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ + R VV+TTGT+LRG I +G+L +G PS L + Sbjct: 127 DRLIIEDGECRGVITNTGAQYRAKAVVVTTGTYLRGKIILGELSYESGPNNMQPSIKLSD 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R+ G TI + KTE Q D++ FS+ T K Q+ C +T Sbjct: 187 HLKELGFDLVRFKTGTPPRVHGNTIDYKKTEIQPGDDKPRAFSYETTKFITDQLPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ TH+II N+ S +YSG I+ GPRYCPSIEDKIVRF ++ HQIFLEPEG +T Sbjct: 247 TSENTHQIISANLGRSPMYSGMIEGTGPRYCPSIEDKIVRFSDKPRHQIFLEPEGRDTSE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q ++TIPGLE+V ++RPGYAIEYD I P +L+PTLETKKISGLF Sbjct: 307 VYVQGLSTSLPEDVQLSMLKTIPGLEEVRMMRPGYAIEYDAIVPTQLWPTLETKKISGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QG++AGIN+A+K+ + + R+++YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGIMAGINAAQKAFGKEGVILDRSEAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAE+R+ LR DNAD RLT G +LG I E R RF + + + +LV+ Sbjct: 427 RLLTSRAEFRLILRHDNADLRLTEKGYELGLISEERYSRFKAKQEAIEQEKQRISALVVK 486 Query: 485 SKN--------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDAR-KFSSLVIER 535 + L S S++ + A L P+ + + I P + V E+ Sbjct: 487 PSDEVNQLLERLGSRSMT-----EALKATAVLKRPEMTYDHFLKIIPRPDVELDDEVYEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y +Q + + +K E++ IP+D DY ++ ++ E ++KL ++P ++ QA Sbjct: 542 VEIQVKYEGYIEKQWQQIERLKKMEQKRIPEDLDYDAIQGIATEARQKLKQVRPLSVGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S++ G+ PA +++LL+Y+++ Sbjct: 602 SRVSGVNPADISILLVYLEQ 621 >gi|313111484|ref|ZP_07797285.1| glucose-inhibited division protein A [Pseudomonas aeruginosa 39016] gi|310883787|gb|EFQ42381.1| glucose-inhibited division protein A [Pseudomonas aeruginosa 39016] Length = 603 Score = 529 bits (1363), Expect = e-148, Method: Compositional matrix adjust. Identities = 278/593 (46%), Positives = 365/593 (61%), Gaps = 5/593 (0%) Query: 27 LGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVK 86 +G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL G M D GIQFR+LN + Sbjct: 1 MGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDALGGAMAEATDKGGIQFRILNSR 60 Query: 87 KGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIR 146 KGPAVR R QADR LY+ A++ + +Q NL + Q E++ + +V Q Sbjct: 61 KGPAVRATRAQADRVLYKAAIRHTLENQPNLWIFQQACDDLIVEQDQVRGVVTQMGLRFH 120 Query: 147 CSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDG 206 VVLTTGTFL G+IHIG GR GD PS +L + GRLKTGTP R+DG Sbjct: 121 ADNVVLTTGTFLGGLIHIGLENYSGGRAGDPPSIALARRLRELPLRVGRLKTGTPPRIDG 180 Query: 207 KTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITRTNLETHRIIMENIKHSAIYSG 265 +++ + +Q D + SF+ K + Q+ C IT TN TH II N+ S +YSG Sbjct: 181 RSVDFSVMTEQPGDTPIPVMSFLGSKEQHPEQVSCWITHTNARTHEIIAANLDRSPMYSG 240 Query: 266 DIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRT 325 I+ GPRYCPSIEDKI RF ++ HQ+FLEPEGL T +YPNGIST+LP ++Q Q +R+ Sbjct: 241 VIEGIGPRYCPSIEDKIHRFADKESHQVFLEPEGLTTHELYPNGISTSLPFDVQLQIVRS 300 Query: 326 IPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVA 385 I G+E +I+RPGYAIEYD+ +P++L +LETK I GLF AGQINGTTGYEEA AQGL+A Sbjct: 301 IRGMENAHIVRPGYAIEYDFFDPRDLRYSLETKVIGGLFFAGQINGTTGYEEAGAQGLLA 360 Query: 386 GINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNR 445 G N+A +S D C R ++YIGV++DDL + G EPYRMFTSRAEYR+ LR DNAD R Sbjct: 361 GANAALRSQGKDSWCPRRDEAYIGVLVDDLITLGTQEPYRMFTSRAEYRLILREDNADLR 420 Query: 446 LTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAY 505 LT G +LG + +RR F + LKS + +I+ + Y Sbjct: 421 LTEKGRELGLVDDRRWAAFEAKREGIEREEQRLKSTWVRPNTPQGDAIAERFGTPLTHEY 480 Query: 506 ---EFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKR 562 LS P+ L I DA + V E+++I + YA Y RQ E ++ E Sbjct: 481 NLLNLLSRPEIDYAGLVEITGDAVD-NPQVAEQVEIRTKYAGYIDRQQEEIARLRASEDT 539 Query: 563 LIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 +P D DY + LS E++ KL+ +P L QAS+I G+TPAA++LLLI++KK Sbjct: 540 RLPVDIDYLGISGLSKEIQNKLNQARPETLGQASRIPGVTPAAISLLLIHLKK 592 >gi|253573864|ref|ZP_04851206.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Paenibacillus sp. oral taxon 786 str. D14] gi|251846341|gb|EES74347.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Paenibacillus sp. oral taxon 786 str. D14] Length = 628 Score = 529 bits (1363), Expect = e-148, Method: Compositional matrix adjust. Identities = 276/614 (44%), Positives = 390/614 (63%), Gaps = 6/614 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +Y+VIV+G GHAGCEAA AA++G T ++T + M CNP+IGG KGH+VREIDA Sbjct: 7 NYEVIVVGAGHAGCEAALAAARMGCRTLMVTINLDMVAFMPCNPSIGGPAKGHVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAV R QAD+ LY+ AM+ + + NL ++QG V Sbjct: 67 LGGEMGRNIDKTFIQMRMLNTGKGPAVHALRAQADKFLYQHAMKETLEKEPNLTMLQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ + + R VVLTTGT+LRG I +G+L +G PS L Sbjct: 127 EELIVEDGQCVGVITKTGAEYRAKAVVLTTGTYLRGKIIMGELMYESGPNNQQPSVRLAQ 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + + F+ R KTGTP R+ +I + +TE Q DE+ FS+ T N Q+ C +T Sbjct: 187 NLKELGFELVRFKTGTPPRVHKDSIDFSQTEIQPGDEKPKFFSYETKSSDNEQLPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETH+II +N+ + ++SG I+ GPRYCPSIEDKIVRF ++ HQIFLEPEG NT Sbjct: 247 TSEETHKIITDNLHRAPMFSGVIEGTGPRYCPSIEDKIVRFSDKPKHQIFLEPEGKNTSE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 Y G ST++PEE+Q Q +R++PGL+ V ++R GYAIEYD + P +L+P+LETK++ GLF Sbjct: 307 YYVQGFSTSMPEEVQLQMLRSVPGLQNVQMMRTGYAIEYDAVVPTQLWPSLETKRLPGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QG++AGIN+ARK + I R+ YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGIMAGINAARKVQGKEPIVLDRSQGYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF----AKYIQEYNFLRSLLKS 480 R+ TSRAEYR+ LR DNAD RLTP+G ++G I E R RF K QE L++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTPLGYEIGLISEERYARFLDKKQKVEQEIERLKTTKIR 486 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + L S + QDG L P+ + ++ SI P + + E+++I+ Sbjct: 487 PTEINPLLESIGSAPIQDGSNLLT--ILRRPEVTYAHIASISPSEVELDEEMQEQVEIQI 544 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 YA Y +Q+I + ++ EK+ IP++ +Y + L+ E ++KLS ++P ++ QAS+I G Sbjct: 545 KYAGYIEKQLIHVERLQKMEKKKIPENINYDDIQGLAIEARQKLSKIRPISIGQASRISG 604 Query: 601 MTPAALNLLLIYIK 614 +TPA +++LL+Y++ Sbjct: 605 VTPADISILLVYLE 618 >gi|308388412|gb|ADO30732.1| glucose inhibited division protein A [Neisseria meningitidis alpha710] Length = 642 Score = 529 bits (1363), Expect = e-148, Method: Compositional matrix adjust. Identities = 287/621 (46%), Positives = 394/621 (63%), Gaps = 12/621 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 19 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 78 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY+ A++ + +QENLD+ Q Sbjct: 79 ALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKAAIREMLENQENLDLFQQA 138 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + + IS ++ + VVLT GTFL G IHIG GR GD + SL Sbjct: 139 VEDVTLDGDRISGVITAMGVEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 198 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT----DKITNRQIE 239 + + GRLKTGTP R+DG+TI + + +Q D P M+ ++ RQ+ Sbjct: 199 GRLRELNLPQGRLKTGTPPRIDGRTIDFSQLTEQPGD---TPVPVMSVRGNAEMHPRQVS 255 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEG Sbjct: 256 CWITHTNTQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEG 315 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 316 LTTHEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKT 375 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I+GLF AGQINGTTGYEEAAAQGL+AG N+ + + D + R +Y+GV++DDL +KG Sbjct: 376 IAGLFFAGQINGTTGYEEAAAQGLLAGANAVQYVREQDPLLLRREQAYLGVLVDDLITKG 435 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 V EPYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + + LK Sbjct: 436 VNEPYRMFTSRAEYRLQLREDNADMRLTEDGYKIGLVGEAQWRMFNEKREAIEREIQRLK 495 Query: 480 SLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI--CPDARKFSSLVIE 534 + T + L+ + ++ + ++ L P+ L ++ + + S+ V+E Sbjct: 496 TTWYTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGAMPSERLSAEVVE 555 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E + E +P+D DYS + LS E+++KL+ KP + Q Sbjct: 556 QVEIQVKYQGYIDRQNEEIDSRRDIETLKLPEDIDYSKVKGLSAEVQQKLNQHKPETVGQ 615 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G+TPAA+ LL++++K+ Sbjct: 616 ASRISGVTPAAVALLMVHLKR 636 >gi|254478035|ref|ZP_05091419.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Carboxydibrachium pacificum DSM 12653] gi|214036039|gb|EEB76729.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Carboxydibrachium pacificum DSM 12653] Length = 633 Score = 529 bits (1363), Expect = e-148, Method: Compositional matrix adjust. Identities = 278/625 (44%), Positives = 396/625 (63%), Gaps = 11/625 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV V+G GHAG EAA +A+LG ST I M+CNP+IGG K LVREIDAL Sbjct: 8 YDVCVVGLGHAGSEAALASARLGLSTVGFATNLDAIALMACNPSIGGPAKAQLVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D + +Q R LN KGPAVR R Q D++LY++ M+ + QENLD+ Q E+ Sbjct: 68 GGQMAINTDKSLLQMRTLNTSKGPAVRSLRAQVDKKLYQMNMKHTLERQENLDIKQAEIV 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + N ++ +V + ++ +C ++TTGTFL+G + IG++ +G G P++ L + Sbjct: 128 DILVKDNKVTGVVTKLGAIYKCKACIITTGTFLKGRVIIGEVDFESGPSGLFPASELSEA 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + F R KTGTP R+D ++I + K E Q DE + PFSFM DKI Q+ C +T T Sbjct: 188 LKRLGFKLMRFKTGTPPRVDKRSIDFSKMEIQPGDEVITPFSFMHDKIEIEQMPCWLTYT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N +TH+II +NI + +++G I G RYCPSIEDK+V+F R HQIF+EPEG +T + Sbjct: 248 NEKTHKIIRDNIHRAPLFTGAITGVGVRYCPSIEDKVVKFPHRERHQIFIEPEGRDTYEM 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+S++LPE++Q +F+RT+PGLE V ++RP YAIEYD I+P +L TLE+K I GL+ Sbjct: 308 YVQGMSSSLPEDVQLEFLRTVPGLENVRVMRPAYAIEYDCIDPTQLKATLESKWIEGLYF 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ+NGT+GYEEAAAQGL+AGIN+A K + R+ +YIG++IDDL +KG EPYR Sbjct: 368 AGQVNGTSGYEEAAAQGLMAGINAAMKILNKPPVVLDRSQAYIGILIDDLVTKGTNEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFA-KYIQEYNFLRSLLKSLVLT 484 M TSRAEYR+ LR DNAD RLT IG ++G + E R ++F K IQ +R L +V Sbjct: 428 MLTSRAEYRLLLRQDNADFRLTEIGKEIGLVTEERYEKFLRKKIQLEKEMRRLSTVMVRP 487 Query: 485 SKNLSSTSISFKQDGKTRTA-----YEFLSYPDFSIQNLFSICPD-ARKFSSLVIERLQI 538 ++ +++ IS G T Y L P+ ++ + PD V E++ I Sbjct: 488 TEEVNNFLIS---RGSTPLVSGVDLYTLLKRPEVDYKSTKFLDPDRPDDILDSVAEQIDI 544 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 Y Y +Q+ + ++ K E + IP+D DY + LSNE KEKLS ++P ++ QAS+I Sbjct: 545 NIKYEGYILKQLRQVEQFKAMENKKIPEDIDYYQISGLSNEAKEKLSKIRPTSVGQASRI 604 Query: 599 EGMTPAALNLLLIYIKK-NTVKLNE 622 G++PA +++LLIY+++ +K NE Sbjct: 605 SGVSPADISVLLIYLQQMKKMKSNE 629 >gi|15616631|ref|NP_239843.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|11132238|sp|P57117|MNMG_BUCAI RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|25300002|pir||A84930 glucose inhibited division protein A [imported] - Buchnera sp. (strain APS) gi|10038694|dbj|BAB12729.1| glucose inhibited division protein A [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] Length = 628 Score = 529 bits (1363), Expect = e-148, Method: Compositional matrix adjust. Identities = 288/622 (46%), Positives = 395/622 (63%), Gaps = 7/622 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R++DVIV+G GHAG EAA ++++G T L+T K S +G++SCNPAIGG+GK HLV+EID Sbjct: 5 RNFDVIVVGAGHAGTEAAMASSRMGCKTLLLTQKISDLGALSCNPAIGGIGKSHLVKEID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G+M + D +GIQFR+LN KGPAVR R QAD+ LY +++ + Q NL +++ E Sbjct: 65 ALGGMMAKAIDYSGIQFRILNSSKGPAVRSTRAQADKILYHETVKKILKKQNNLLILEAE 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + + ++ Q+ +VVL GTFL G IHIG AGR+GD + L Sbjct: 125 VKDLIFKNYSVVGVLTQNEINFYSRSVVLAAGTFLGGKIHIGLKSYSAGRIGDKSAIDLS 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGI 242 + RLKTGTP R+D T+ ++ Q +D + FSFM + + +QI C + Sbjct: 185 VRLRELSLRVNRLKTGTPPRIDINTVNFNNLLIQNSDTPVPVFSFMGNVSHHPKQIPCYL 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II +N+ S IY+G +K GPRYCPSIEDKIVRF +R HQ+FLEPEGL++ Sbjct: 245 THTNEKTHEIIRKNLDKSPIYTGFLKGLGPRYCPSIEDKIVRFPDRKSHQVFLEPEGLSS 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 VYPNGIST+LP E+Q Q + +I GLEK IIRPGYAIEYD+ +PK+L TLE+K I G Sbjct: 305 IKVYPNGISTSLPIEVQEQIVASIKGLEKSKIIRPGYAIEYDFFDPKDLNLTLESKLIKG 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAA+QGL+AG+N+A S + R +Y+GV+IDDLT++G E Sbjct: 365 LFFAGQINGTTGYEEAASQGLLAGLNAALSSKNTEGWFPRRDQAYLGVLIDDLTTQGTEE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYI----QEYNFLRSLL 478 PYRMFTSRAEYR+SLR DNAD RLT IG KLG + + R R+ + + E N L+ Sbjct: 425 PYRMFTSRAEYRLSLREDNADLRLTEIGRKLGLVNDSRWIRYNQKVLNIQTEMNRLKKNK 484 Query: 479 KSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VIERLQ 537 S + ++ + K + E L P Q+L S+ L I +++ Sbjct: 485 ISPISPDADILKKLYNINLI-KEISMSELLKRPQIRYQDLQSLESFRTGIVDLEAIGQIE 543 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 E YA Y RQ E + E + +DY+ + LS+E+ +KL+ KP ++ QAS+ Sbjct: 544 NEIKYAGYIKRQSEEIERHLKNENTFLSSIYDYNKIRGLSSEVVKKLNDYKPISIGQASR 603 Query: 598 IEGMTPAALNLLLIYIKKNTVK 619 I G+TPAA+++LLI++KK + K Sbjct: 604 ISGITPAAISILLIHLKKESYK 625 >gi|254520703|ref|ZP_05132759.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium sp. 7_2_43FAA] gi|226914452|gb|EEH99653.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium sp. 7_2_43FAA] Length = 632 Score = 529 bits (1363), Expect = e-148, Method: Compositional matrix adjust. Identities = 272/612 (44%), Positives = 393/612 (64%), Gaps = 3/612 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+V+G GHAGCEAA AA++G T + T ++ M CNP IGG KGHLVREIDAL Sbjct: 16 YDVVVVGAGHAGCEAALAAARMGLKTLICTTNLDSVAMMPCNPNIGGTAKGHLVREIDAL 75 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG D IQ R+LN KGPAV R QAD++ Y+ M+ + +QENL + Q EV Sbjct: 76 GGEMGVNIDNTFIQSRMLNTSKGPAVHSLRAQADKKKYQNRMKNVLENQENLSLRQLEVI 135 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + E + ++ ++ C ++LTTGT+LR I IG + +G G + +N L S Sbjct: 136 EVDVEDGKVKGVLTKNGGYFSCKAIILTTGTYLRARIIIGDVTYNSGPNGLAAANELSQS 195 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + R KTGTPAR++ +++ + K +Q DE+++PFSFM+D I+ Q+ C +T T Sbjct: 196 LIDLGISLRRFKTGTPARINKRSVDFSKMVEQPGDEKIVPFSFMSDDISREQVSCWLTYT 255 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 + ETH+II ENI+ S +Y+G I+ GPRYCPSIEDK++RF +R HQ+F+EPEG +T + Sbjct: 256 SGETHKIIQENIERSPMYNGLIEGVGPRYCPSIEDKVMRFPDRERHQLFIEPEGEDTQEM 315 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+S++LPE++Q Q +RT+PGLE V I+R YAIEYD I+P +L PTLE K GL+ Sbjct: 316 YIGGMSSSLPEDVQLQMLRTVPGLENVEIMRTAYAIEYDSIDPTQLKPTLEFKNFDGLYG 375 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ+NG++GYEEAAAQG+VAGIN++ K + + +R+D Y+GV+IDDL +KG EPYR Sbjct: 376 AGQLNGSSGYEEAAAQGIVAGINASLKIKDKEPMILTRSDGYMGVLIDDLVTKGTNEPYR 435 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 M TSRAEYR+ LR DNAD RLT IG K+G E R +RF LK L +T+ Sbjct: 436 MMTSRAEYRLLLRQDNADFRLTEIGYKVGLATEERYQRFLTRKNNIENEAKRLKELQITN 495 Query: 486 KNLSS---TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSY 542 K ++ S+ + K + YE + P+ +L S+ D + + E++ + Y Sbjct: 496 KKETNEFLVSMGSTELKKPISFYELIKRPELDYFSLESLDIDRPDYEDDIGEQINTIAKY 555 Query: 543 AAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMT 602 Y Q+ + ++ K EK+LIP+D +Y+ + L E +KLS ++P ++ QAS+I G++ Sbjct: 556 EGYIDSQLDQVRQFKKFEKKLIPEDLEYADVKGLRTEAIQKLSNIRPVSIGQASRISGVS 615 Query: 603 PAALNLLLIYIK 614 PA +++LLIY++ Sbjct: 616 PADISVLLIYLE 627 >gi|83815019|ref|YP_444213.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salinibacter ruber DSM 13855] gi|123529872|sp|Q2S6G8|MNMG_SALRD RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|83756413|gb|ABC44526.1| glucose-inhibited division protein A [Salinibacter ruber DSM 13855] Length = 664 Score = 529 bits (1363), Expect = e-148, Method: Compositional matrix adjust. Identities = 279/629 (44%), Positives = 395/629 (62%), Gaps = 18/629 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGH+G EAAA AA +GA T LIT K + IG MSCNPAIGG+GKGH+ REIDAL Sbjct: 8 HDVIVVGGGHSGSEAAAAAANMGADTLLITMKLADIGQMSCNPAIGGIGKGHIAREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+MG+ D AGIQFR+LN KGPAV GPR Q R Y A+++E+ + +NL + V Sbjct: 68 GGIMGKATDRAGIQFRMLNKSKGPAVWGPRAQCGRRAYARAIRQELEAIDNLKMRSDMVK 127 Query: 126 GFNTEK--NIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 T+ ++ + R VVLTTGTF GVIH+G+ GR+G+S S+ + Sbjct: 128 EILTDDAGETVTGVRTNLGKEFRAPCVVLTTGTFSNGVIHVGEQNFGGGRIGESASHGIT 187 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI--TNRQIECG 241 F++GRLKTGTP R+DG++I + EKQ D FSF+TD + Q+ C Sbjct: 188 GCLHDLGFESGRLKTGTPPRVDGRSIDYSVMEKQPGDPDATAFSFLTDDLPSVEAQLSCW 247 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T T ETH ++ S +++G + + GPRYCPSIEDKI RF E++ HQ+F+EPEG + Sbjct: 248 LTDTTPETHEVLRTGFDRSPMFTGALDADGPRYCPSIEDKIDRFSEKDHHQLFIEPEGRD 307 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T VY NG S++LPEE+Q + +RT+PG+E+ ++ RPGYAIEYD+ P ++ +LETK + Sbjct: 308 THEVYVNGFSSSLPEEVQFEALRTVPGMEEAHMHRPGYAIEYDFFPPYQIEYSLETKYVD 367 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQINGTTGYEEAAAQG++AGIN+ +K + D I R+++YIGV+IDDL +KG Sbjct: 368 GLFFAGQINGTTGYEEAAAQGIMAGINAVQKLRQADPIVLKRSEAYIGVLIDDLVAKGTD 427 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAE+RI LR DNAD RLT +G KLG + R R + + + R L Sbjct: 428 EPYRMFTSRAEHRILLRQDNADQRLTELGHKLGLASKERLDRTREKERAIDVTRETLSDT 487 Query: 482 VLTSKNLSS--TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIER---- 535 ++ + + S+ + R E P+ ++L A + +V E Sbjct: 488 TVSPQQVDDYLQSVGTSTLNQPRPVIELCKRPEVDSEDLLR---HAGLYDEVVTEAPGML 544 Query: 536 -----LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 ++I+ Y Y RQ +E++ +E+ IP DFDY +L +S E ++KLS ++P Sbjct: 545 SAPRLIEIDLKYEGYIDRQKDMVEEMEEKERWPIPDDFDYHALDNISIEARQKLSKVEPD 604 Query: 591 NLLQASKIEGMTPAALNLLLIYIKKNTVK 619 NL QAS++ G+ + +++L++ +K V+ Sbjct: 605 NLGQASRVPGVRASDISVLMVLLKNEGVE 633 >gi|312794738|ref|YP_004027661.1| glucose inhibited division protein a [Caldicellulosiruptor kristjanssonii 177R1B] gi|312181878|gb|ADQ42048.1| glucose inhibited division protein A [Caldicellulosiruptor kristjanssonii 177R1B] Length = 639 Score = 529 bits (1363), Expect = e-148, Method: Compositional matrix adjust. Identities = 279/616 (45%), Positives = 389/616 (63%), Gaps = 10/616 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV VIG GHAG EAA +A+LG T + +IG+M CNP+IGG GKGHLVREIDAL Sbjct: 19 YDVAVIGAGHAGIEAALASARLGLKTIIFAINLDSIGNMPCNPSIGGTGKGHLVREIDAL 78 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ ADA IQ R+LN KGPAV R Q DR YRL M+R + +QENLD+ QGEV Sbjct: 79 GGEMGKAADATAIQVRILNRAKGPAVYSLRAQCDRSRYRLYMKRVLENQENLDIRQGEVC 138 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + ++ VVL TGTFL G + IG+ +G G P+ L + Sbjct: 139 EIIVEDGRVKGVKITTGAIFLAKAVVLATGTFLGGKVIIGETVYDSGPDGMHPARYLTEN 198 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNRQIECGITR 244 K + R KTGTPAR+ +++ + K + Q DE+ +PFSF D Q+ C +T Sbjct: 199 LKKLGIEMMRFKTGTPARVHRRSLDFSKMQIQPGDEKPLPFSFENEDNFNIVQVPCYLTY 258 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETHRII EN+ + +++G I GPRYCPSIEDK+VRF ++ HQ+F+EP GL+TD Sbjct: 259 TTEETHRIIRENLHRAPLFTGLISGIGPRYCPSIEDKVVRFADKPRHQVFIEPTGLDTDE 318 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+ST+LPE++Q + R++ GLE V I+RP YAIEYD INP +L PTL+ KKI GLF Sbjct: 319 MYVQGMSTSLPEDVQVKMYRSVIGLENVKIMRPAYAIEYDCINPLQLEPTLQFKKIKGLF 378 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAAAQG++AGIN+A + + R+ +YIGV+IDDL +KG EPY Sbjct: 379 SAGQINGTSGYEEAAAQGIIAGINAAMYVKGKEMLILDRSQAYIGVLIDDLVTKGTNEPY 438 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLR---SLLKSL 481 R+ TSRAEYR+ LR DNAD RLT IG K+G I Q+R+ K++Q+ + + +K+ Sbjct: 439 RIMTSRAEYRLILRQDNADLRLTEIGYKIGLIS---QQRYEKFLQKKKMIEDEINRVKNT 495 Query: 482 VLTSKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 V+ + + K T + L P+ S ++L I P V + ++I Sbjct: 496 VIAPSEKVNKFLQEKGSSPISTGVKLSDLLKRPELSYEDLKEIDPARPDLPWYVQDEVEI 555 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E Y Y +Q+ + ++ K E + IP+ DYS + LS E ++KLS ++P ++ QAS+I Sbjct: 556 EIKYEGYIKKQLAQIEQFKKLENKKIPEWVDYSQILGLSTEARQKLSQIRPASIGQASRI 615 Query: 599 EGMTPAALNLLLIYIK 614 G++PA +++LLI+++ Sbjct: 616 SGVSPADISVLLIWLE 631 >gi|260940192|ref|XP_002614396.1| hypothetical protein CLUG_05882 [Clavispora lusitaniae ATCC 42720] gi|238852290|gb|EEQ41754.1| hypothetical protein CLUG_05882 [Clavispora lusitaniae ATCC 42720] Length = 677 Score = 529 bits (1362), Expect = e-148, Method: Compositional matrix adjust. Identities = 273/635 (42%), Positives = 405/635 (63%), Gaps = 20/635 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 + VIV+GGGHAGCEAA +A+ GA+T L+T + IG+ SCNP++GG+GKG L+RE+DAL Sbjct: 29 HGVIVVGGGHAGCEAATASARAGAATTLVTPHVNKIGTASCNPSMGGVGKGTLLREVDAL 88 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DG+ RV D AGI F+ LN KG AV+GPR Q DR++Y MQR I+S NL V++ V Sbjct: 89 DGVAPRVTDKAGIHFKTLNASKGAAVQGPRAQIDRDIYLREMQRTIMSYPNLQVLEASVE 148 Query: 126 GF---NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 K + +V+ D S++RC+ VVLTTGTFL G IHIG P+GR+G++ + L Sbjct: 149 DVVIAEGPKPEVRGVVLGDGSVLRCNQVVLTTGTFLGGEIHIGMTAYPSGRIGEAATTGL 208 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--NRQIEC 240 + + F GRLKTGTP RL KTI + Q +D P S++ +++ +R +EC Sbjct: 209 SRTLKQAGFRLGRLKTGTPPRLSSKTIDYRGLAPQPSDMPPQPMSYLNERVELEDRLVEC 268 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 T T + H+++ +N+ S +K GPRYCPSIE K++RF +++ H ++LEPEGL Sbjct: 269 HQTATTPQFHQLVRDNLHQSIHIRETVK--GPRYCPSIESKVIRFPQKDMHVVWLEPEGL 326 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + D+VYPNGIS +PE IQ Q +R +PG E V +++PGY +EYDY++P+EL TLETK++ Sbjct: 327 DCDIVYPNGISCTMPENIQEQLVRMMPGCENVVMLQPGYGVEYDYVDPRELHRTLETKRV 386 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 +GLFLAGQINGTTGYEEAAAQG +AGIN+ + + R+D+YIGV++DDL +KGV Sbjct: 387 AGLFLAGQINGTTGYEEAAAQGCLAGINAGLANVGRSPLVLRRSDAYIGVLVDDLITKGV 446 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSR+E+R S+R DNAD RLT +G + G + E+R + FAK ++ ++S LKS Sbjct: 447 EEPYRMFTSRSEFRFSIRADNADKRLTEMGYRAGVVSEQRYRHFAKQHDQFQAVKSHLKS 506 Query: 481 LVLTSKNLSSTSISFKQDGKTRT--AYEFLSYPDFSIQNLF--------SICPDA-RKFS 529 + ++ + + ++ LSY D + +L + PD ++ S Sbjct: 507 ISMSGARWAPALRGTHRVNNISVVDGWKLLSYKDMHLADLVPHLEKLTGAPLPDCYQEMS 566 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLP--ALSNELKEKLSIL 587 + +R+ +E++Y + ++ K + +E L+P D+ Y++ LS+E+ L+ + Sbjct: 567 RWLTQRIDVEATYEPWLKKEEAHLKAFEADENLLLPMDYTYTNTGNVKLSHEVCHLLNTI 626 Query: 588 KPFNLLQASKIEGMTPAALNLLLIYIKKNTVKLNE 622 +P + QA +I+G+TPAAL L ++ N + E Sbjct: 627 QPRTIGQARRIQGVTPAALFELFKLVRNNQAEYQE 661 >gi|294659139|ref|XP_461483.2| DEHA2F26290p [Debaryomyces hansenii CBS767] gi|202953649|emb|CAG89905.2| DEHA2F26290p [Debaryomyces hansenii] Length = 690 Score = 529 bits (1362), Expect = e-148, Method: Compositional matrix adjust. Identities = 278/648 (42%), Positives = 397/648 (61%), Gaps = 38/648 (5%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 + VIVIGGGHAGCEAA +A+ G T L+T IG+ SCNP++GG+GKG L+REIDAL Sbjct: 41 HPVIVIGGGHAGCEAATGSARSGTFTTLVTPSIDKIGTASCNPSMGGVGKGTLLREIDAL 100 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DG+ R+ D AGI F++LN KG AV GPR Q DR++Y MQ+EIL+ ENL VI+ +V Sbjct: 101 DGVSARITDKAGIHFKILNASKGAAVHGPRAQIDRKIYLTEMQKEILNYENLKVIEAQVE 160 Query: 126 GFNTEK-------------NIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAG 172 E I+ +V+ D +++CS VV+TTGTFL G IHIG PAG Sbjct: 161 DIIIEPPRDQIIDTSGRNFGIVRGVVLSDGRILKCSKVVVTTGTFLGGEIHIGLSCHPAG 220 Query: 173 RMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK 232 RMG+ ++ L +F F GRLKTGTP RL KTI + Q +D P S++ D+ Sbjct: 221 RMGEEATSGLSKTFRDASFRLGRLKTGTPPRLSSKTIDYTNLAPQLSDYPPQPMSYLNDE 280 Query: 233 ITNRQ--IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNG 290 + ++ ++C +T T E H++I +N+ S +K GPRYCPSIE KI++F +++ Sbjct: 281 VDLQEQLMKCHMTSTTPELHKLIADNLDKSIHIRETVK--GPRYCPSIESKIIKFPQKST 338 Query: 291 HQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKE 350 H ++LEPEGL+TD+VYPNGIS +P EIQ +R +PG E V +++PGY +EYDY++P+E Sbjct: 339 HLVWLEPEGLDTDLVYPNGISCTMPAEIQETMVRMMPGCENVTMLQPGYGVEYDYVDPRE 398 Query: 351 LFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGV 410 L TLETK + GL+LAGQINGTTGYEEAAAQG +AGIN+ K + R+D Y+GV Sbjct: 399 LKMTLETKLVDGLYLAGQINGTTGYEEAAAQGCLAGINAGLAYAKKPSLDIHRSDGYLGV 458 Query: 411 MIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQE 470 ++DDL +KGV EPYRMFTSR+E+RIS+R DNAD RL G G + E R F ++ Sbjct: 459 LVDDLITKGVEEPYRMFTSRSEFRISIRSDNADKRLLQKGYDAGVVSESRYDHFKNEMKH 518 Query: 471 YNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRT---AYEFLSYPDFSIQNLFSICPDARK 527 ++ ++ LKSL + + D T ++ LSY D S+ + I P K Sbjct: 519 FDSIKEHLKSLSFSGAKWAPVLKGCNSDMNKTTVVDGWKLLSYKDVSLSD---IIPHLHK 575 Query: 528 FSS-------------LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLP 574 FS ++ R+ +ES+Y + ++ + + +E L+P +++Y++ Sbjct: 576 FSPNGELPELYSHVNRRLMGRINVESTYEPWMKKEEAHLRAYQADETLLLPLNYNYTNEG 635 Query: 575 AL--SNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVKL 620 L S E+ L+ ++P + QA +I+G+TPAA+ L +K N +L Sbjct: 636 NLKISYEVCHLLNTIQPTTIGQARRIQGVTPAAIFELFKLVKGNQAEL 683 >gi|283778885|ref|YP_003369640.1| glucose inhibited division protein A [Pirellula staleyi DSM 6068] gi|283437338|gb|ADB15780.1| glucose inhibited division protein A [Pirellula staleyi DSM 6068] Length = 613 Score = 529 bits (1362), Expect = e-148, Method: Compositional matrix adjust. Identities = 279/618 (45%), Positives = 383/618 (61%), Gaps = 25/618 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+VIGGGHAG EAA AA++GA L+T T+G MSCNPAIGG+ KG +VREIDAL Sbjct: 8 YDVLVIGGGHAGVEAAMAAARIGARVGLLTTNCDTVGQMSCNPAIGGVAKGQIVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLMG V DA GIQFR+LN +KGPA+ PR QAD++ Y+ ++R I ++ N+ + Q V Sbjct: 68 GGLMGEVIDATGIQFRLLNRRKGPAMHSPRAQADKKAYQFEVKRRIEAEPNIALRQETVE 127 Query: 126 GFNTEKNI----ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 TE I + ++ + + R +VVLTTGTFL ++H G++K P GR G+ ++ Sbjct: 128 DLLTETTADGERIVGVRVRGDVVYRAKSVVLTTGTFLSAIMHTGEVKTPGGRAGEGTTSG 187 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK-----ITNR 236 + + + F R KTGTP RL+G+TI + KTE Q D+ PFSF+T + I Sbjct: 188 ISGALARLGFRVSRFKTGTPCRLNGRTIDYSKTEIQPGDDDPQPFSFLTPRSFRSTIVAA 247 Query: 237 QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLE 296 Q+ C IT TN H +I EN+ + +YSG I S GPRYCPSIEDKIVRF ++ HQ+FLE Sbjct: 248 QMPCWITHTNAAVHDLIRENLHRAPMYSGQIHSRGPRYCPSIEDKIVRFADKESHQLFLE 307 Query: 297 PEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLE 356 PEG +T VY NGIST+LP ++Q +R I GLE I+R GYA+EYDY P +L+P LE Sbjct: 308 PEGRHTTEVYVNGISTSLPRDVQDGMLRLIAGLENAQIMRYGYAVEYDYCPPDQLWPWLE 367 Query: 357 TKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 TK + GLF AGQINGTTGYEEAAAQGLVAG ++A K + SR ++YIGV++DDL Sbjct: 368 TKSVPGLFFAGQINGTTGYEEAAAQGLVAGASAALKVAGKAPLTISRDEAYIGVLVDDLV 427 Query: 417 SKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRS 476 + GV EPYRMFTSRAE+R+ LR DNAD RLT +G + G + R + +E R+ Sbjct: 428 TCGVDEPYRMFTSRAEFRLLLRQDNADRRLTALGAEAGLVSAERLALL--HQKEAEIARA 485 Query: 477 LLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 + +L + S+ ++L P+ L ++ + + E++ Sbjct: 486 M---AILRRGRMGEISLE-----------KWLRRPEVDWPQLVAVEGELAEIGPDAAEQV 531 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 + Y Y RQ + + + + IP+ DY S+ L E KEKLS ++P L QAS Sbjct: 532 MFDVKYEGYLTRQEQQVERQRRLSDKTIPERLDYQSIRHLRTEAKEKLSKIRPVTLAQAS 591 Query: 597 KIEGMTPAALNLLLIYIK 614 +I G+TPA + L++ Y++ Sbjct: 592 RISGITPADVALVMAYLE 609 >gi|94987388|ref|YP_595321.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lawsonia intracellularis PHE/MN1-00] gi|205831526|sp|Q1MPS7|MNMG_LAWIP RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|94731637|emb|CAJ55000.1| NAD/FAD-utilizing enzyme apparently involved in cell division [Lawsonia intracellularis PHE/MN1-00] Length = 622 Score = 529 bits (1362), Expect = e-148, Method: Compositional matrix adjust. Identities = 278/614 (45%), Positives = 371/614 (60%), Gaps = 3/614 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++D IV+GGGHAGCEA+ A+LG LIT IG +SCNPA+GG+ KGH+VREIDA Sbjct: 4 TFDCIVVGGGHAGCEASMALARLGQKVLLITGNVDRIGHLSCNPAVGGIAKGHIVREIDA 63 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G+MG AD AGIQFR LN KGPAVR R Q DR+LY A++++I SQ NL V Q V Sbjct: 64 LGGMMGLWADKAGIQFRTLNRSKGPAVRATRAQVDRDLYMQAVKQDIFSQPNLSVWQDTV 123 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + + + V+LTTGTFL G++HIG+ GR+GD ++ L + Sbjct: 124 EAIIVKDGHTGGVKTALGQLFNSQYVILTTGTFLSGLMHIGQKNFSGGRLGDVGTSKLSS 183 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S GRLKTGT RL +I + E Q D + FSF K + Q+ C IT Sbjct: 184 SLHSIGLHLGRLKTGTTPRLLKTSIDFTSMEMQLGDTPIPSFSFHGPKPSQPQVPCYITW 243 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH +I + S +++G I G RYCPSIEDK+ RF +R+ HQIF+EPEGL + Sbjct: 244 TNEYTHDVIRSGMDRSPMFTGVITGTGARYCPSIEDKVARFADRDRHQIFVEPEGLTSQE 303 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 Y NGIST+LP +IQ I TIPGLE +++RPGYAIEYDY++P +L PTLETK + GL+ Sbjct: 304 CYINGISTSLPLDIQLALIATIPGLENAHMVRPGYAIEYDYVDPMQLHPTLETKVLPGLW 363 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGT+GYEEAA QGL A +N K + + R ++Y+ V++DDL ++G EPY Sbjct: 364 LAGQINGTSGYEEAAGQGLWAALNVFCKITRQEPFILGRDNAYLAVLVDDLVTQGTKEPY 423 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR NAD RLTP+G K+G +G+ + F K I + + L + L+++ + Sbjct: 424 RMFTSRAEYRLLLREANADIRLTPLGRKIGLVGDYQWNLFQKKISDIDTLVNRLQNIRIK 483 Query: 485 SKNLSST---SISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 L + + + T E L P + Q L I D S V + Sbjct: 484 PDTLDPSIFLELGESIPNRAYTLEELLKRPSITFQTLRKIYSDLPITSEDVYLETETIIK 543 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ + E +PK+ DY+ + LS+E+ EKL I++P L QA +I G+ Sbjct: 544 YAGYLDRQEELVQRSAKLEHSYLPKEIDYTKVAGLSSEVIEKLQIVRPQTLGQAGRISGV 603 Query: 602 TPAALNLLLIYIKK 615 TPAA+ L IY+KK Sbjct: 604 TPAAITCLEIYLKK 617 >gi|325137026|gb|EGC59622.1| glucose-inhibited division protein A [Neisseria meningitidis M0579] gi|325202972|gb|ADY98426.1| glucose-inhibited division protein A [Neisseria meningitidis M01-240149] gi|325203314|gb|ADY98767.1| glucose-inhibited division protein A [Neisseria meningitidis M01-240355] gi|325205285|gb|ADZ00738.1| glucose-inhibited division protein A [Neisseria meningitidis M04-240196] gi|325207230|gb|ADZ02682.1| glucose-inhibited division protein A [Neisseria meningitidis NZ-05/33] Length = 628 Score = 529 bits (1362), Expect = e-148, Method: Compositional matrix adjust. Identities = 287/621 (46%), Positives = 394/621 (63%), Gaps = 12/621 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 5 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY+ A++ + +QENLD+ Q Sbjct: 65 ALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKAAIREMLENQENLDLFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + + IS ++ + VVLT GTFL G IHIG GR GD + SL Sbjct: 125 VEDVTLDGDRISGVITAMGVEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT----DKITNRQIE 239 + + GRLKTGTP R+DG+TI + + +Q D P M+ ++ RQ+ Sbjct: 185 GRLRELNLPQGRLKTGTPPRIDGRTIDFSQLTEQPGD---TPVPVMSVRGNAEMHPRQVS 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEG Sbjct: 242 CWITHTNTQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 302 LTTHEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKT 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I+GLF AGQINGTTGYEEAAAQGL+AG N+ + + D + R +Y+GV++DDL +KG Sbjct: 362 IAGLFFAGQINGTTGYEEAAAQGLLAGANAVQYVREQDPLLLRREQAYLGVLVDDLITKG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 V EPYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + + LK Sbjct: 422 VNEPYRMFTSRAEYRLQLREDNADMRLTEDGYKIGLVGEAQWRMFNEKREAIEREIQRLK 481 Query: 480 SLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI--CPDARKFSSLVIE 534 + T + L+ + ++ + ++ L P+ L ++ + + S+ V+E Sbjct: 482 TTWYTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGAMPSERLSAEVVE 541 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E + E +P+D DYS + LS E+++KL+ KP + Q Sbjct: 542 QVEIQVKYQGYIDRQNEEIDSRRDIETLKLPEDIDYSKVKGLSAEVQQKLNQHKPETVGQ 601 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G+TPAA+ LL++++K+ Sbjct: 602 ASRISGVTPAAVALLMVHLKR 622 >gi|311085751|gb|ADP65833.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] Length = 628 Score = 529 bits (1362), Expect = e-148, Method: Compositional matrix adjust. Identities = 287/621 (46%), Positives = 395/621 (63%), Gaps = 5/621 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R++DVIV+G GHAG EAA ++++G T L+T K S +G++SCNPAIGG+GK HLV+EID Sbjct: 5 RNFDVIVVGAGHAGTEAAMASSRMGCKTLLLTQKISDLGALSCNPAIGGIGKSHLVKEID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G+M + D +GIQFR+LN KGPAVR R QAD+ LY +++ + Q NL +++ E Sbjct: 65 ALGGMMAKAIDYSGIQFRILNSSKGPAVRSTRAQADKILYHETVKKILKKQNNLLILEAE 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + + ++ Q+ +VVL GTFL G IHIG AGR+GD + L Sbjct: 125 VKDLIFKNYSVVGVLTQNEINFYSRSVVLAAGTFLGGKIHIGLKSYSAGRIGDKSAIDLS 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGI 242 + RLKTGTP R+D T+ ++ Q +D + FSFM + + +QI C + Sbjct: 185 VRLRELSLRVNRLKTGTPPRIDINTVNFNNLLIQNSDTPVPVFSFMGNVSHHPKQIPCYL 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II +N+ S IY+G +K GPRYCPSIEDKIVRF +R HQ+FLEPEGL++ Sbjct: 245 THTNEKTHEIIRKNLDKSPIYTGFLKGLGPRYCPSIEDKIVRFPDRKSHQVFLEPEGLSS 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 VYPNGIST+LP E+Q Q + +I GLEK IIRPGYAIEYD+ +PK+L TLE+K I G Sbjct: 305 IKVYPNGISTSLPIEVQEQIVASIKGLEKSKIIRPGYAIEYDFFDPKDLNLTLESKLIKG 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAA+QGL+AG+N+A S + R +Y+GV+IDDLT++G E Sbjct: 365 LFFAGQINGTTGYEEAASQGLLAGLNAALSSKNTEGWFPRRDQAYLGVLIDDLTTQGTEE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+SLR DNAD RLT IG KLG + + R R+ + + + LK Sbjct: 425 PYRMFTSRAEYRLSLREDNADLRLTEIGRKLGLVNDSRWIRYNQKVLNIQTEMNRLKKNK 484 Query: 483 LTSKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VIERLQI 538 ++ +L + + + K + E L P Q+L S+ L I +++ Sbjct: 485 ISPISLDADILKKLYNINLIKEISMSELLKRPQIRYQDLQSLESFRTGIVDLEAIGQIEN 544 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E YA Y RQ E + E + DY+ + LS+E+ +KL+ KP ++ QAS+I Sbjct: 545 EIKYAGYIKRQSEEIERHLKNENTFLSSICDYNKIRGLSSEVVKKLNDYKPISIGQASRI 604 Query: 599 EGMTPAALNLLLIYIKKNTVK 619 G+TPAA+++LLI++KK + K Sbjct: 605 SGITPAAISILLIHLKKESYK 625 >gi|225025383|ref|ZP_03714575.1| hypothetical protein EIKCOROL_02281 [Eikenella corrodens ATCC 23834] gi|224941827|gb|EEG23036.1| hypothetical protein EIKCOROL_02281 [Eikenella corrodens ATCC 23834] Length = 631 Score = 529 bits (1362), Expect = e-148, Method: Compositional matrix adjust. Identities = 289/619 (46%), Positives = 395/619 (63%), Gaps = 8/619 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 8 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 67 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY+ A++ + +QENLD+ Q Sbjct: 68 ALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKAAIREMLENQENLDLFQQS 127 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + + IS ++ + VVLT GTFL G IHIG GR GD + SL Sbjct: 128 VDDVTLDGDRISGVITAMGVEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 187 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + + GRLKTGTP R+DG+TI + + +Q D + FS + + RQ+ C I Sbjct: 188 GRLRELNLPQGRLKTGTPPRIDGRTIDFSQLTEQPGDTPVPVFSVRGNADMHPRQVSCWI 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TNL+TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEGL T Sbjct: 248 THTNLKTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEGLTT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK I G Sbjct: 308 NEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKTIQG 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AG N+ + + D + R +Y+GV++DDL +KGV E Sbjct: 368 LFFAGQINGTTGYEEAAAQGLLAGANAVQYIREQDPLLLRREQAYLGVLVDDLITKGVNE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + + LK++ Sbjct: 428 PYRMFTSRAEYRLQLREDNADMRLTEDGHKIGLVGEAQWRMFNEKREAIEREIQRLKTMW 487 Query: 483 LTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI---CPDARKFSSLVIERL 536 T + L+ + ++ + ++ L P+ L ++ P+ R VIE++ Sbjct: 488 YTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGAEPECR-LPENVIEQV 546 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y Y RQ E + E +P++ DYS + LS E+++KL+ KP + QAS Sbjct: 547 EIQVKYQGYIDRQNEEIDSRRDLETLRLPENIDYSKVKGLSAEVQQKLNQHKPETVGQAS 606 Query: 597 KIEGMTPAALNLLLIYIKK 615 +I G+TPAA+ LL++++K+ Sbjct: 607 RISGVTPAAVALLMVHLKR 625 >gi|78189959|ref|YP_380297.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Chlorobium chlorochromatii CaD3] gi|123579142|sp|Q3AP21|MNMG_CHLCH RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|78172158|gb|ABB29254.1| Glucose-inhibited division protein A subfamily [Chlorobium chlorochromatii CaD3] Length = 621 Score = 529 bits (1362), Expect = e-148, Method: Compositional matrix adjust. Identities = 270/620 (43%), Positives = 392/620 (63%), Gaps = 10/620 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEA AA++GA+ LIT + I MSCNPAIGG+ KG + REIDAL Sbjct: 2 YDVIVVGAGHAGCEAILAAARMGATCLLITSDLTAIARMSCNPAIGGMAKGQITREIDAL 61 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + DA GIQFR+LN KGPA+ PR QADR LY L M+ I + N+D++Q V Sbjct: 62 GGEMAKAIDATGIQFRLLNRSKGPAMHSPRAQADRTLYSLYMRTIIEREPNIDLLQDTVI 121 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGR-MGDSPSNSLFN 184 T+ + + + + +I + +LT GTFL G+IH+G GR + + P L Sbjct: 122 AIETKGECFAGVRITSSRVIEGKSAILTCGTFLNGLIHVGMNHFAGGRTIAEPPVVGLTE 181 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGIT 243 + F GRLKTGTP R+D ++I + K ++Q D I FSF + + ++Q+ C IT Sbjct: 182 NLCAHGFQAGRLKTGTPPRIDSRSIDYRKVDEQPGDIEPILFSFESKGALQSKQVSCFIT 241 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 +T ETH I+ + + S +++G ++ GPRYCPS+EDKI RF ++N H IFLEPEG++T+ Sbjct: 242 KTTEETHAILRKGFERSPLFTGKVQGIGPRYCPSVEDKIFRFPDKNSHHIFLEPEGIDTN 301 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y NG ST+LPE+IQ + + +IPGLE+V +IRPGYAIEYDY P ++ TLET+ I L Sbjct: 302 EMYVNGFSTSLPEDIQLEGLHSIPGLEQVKMIRPGYAIEYDYFYPHQIQATLETRLIENL 361 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGT+GYEEAAAQGL+AGIN+ K K + + +R+D+YIGV+IDDL +K EP Sbjct: 362 YFAGQINGTSGYEEAAAQGLMAGINAVLKMRKHEPLILTRSDAYIGVLIDDLITKETNEP 421 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTS AE+R+ LR DNAD RL G ++G + E R + + I++ N +++LL + L Sbjct: 422 YRMFTSSAEHRLLLRHDNADIRLHEFGYRVGLLPEHRYQATRQKIEQINAVKTLLSQIRL 481 Query: 484 TS--KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS------LVIER 535 S N + + + + L P ++ L + P+ S LV E+ Sbjct: 482 ESGLANKLLQELEYGEVTGAQQVTTLLKRPRVTLAKLLATSPELHSQLSNISNNPLVYEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y R + A++I+ E IP DY ++ LSNE +EKL +P N+ QA Sbjct: 542 VEIDCKYEGYLKRDALVAEKIQRLEAHHIPALLDYHAIAGLSNEGREKLKKHRPENIGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G++P+ +++L++++ + Sbjct: 602 SRILGVSPSDISILMVHLGR 621 >gi|226952640|ref|ZP_03823104.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Acinetobacter sp. ATCC 27244] gi|226836629|gb|EEH69012.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Acinetobacter sp. ATCC 27244] Length = 644 Score = 528 bits (1361), Expect = e-148, Method: Compositional matrix adjust. Identities = 286/617 (46%), Positives = 385/617 (62%), Gaps = 6/617 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GK HLVREID Sbjct: 23 KVYDVIVIGGGHAGTEAALAAARMGRQTLLLTHNIETLGQMSCNPAIGGIGKSHLVREID 82 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M AD GIQFR+LN +KG AVR R QADR ++ A++ + +Q NLD+ Q Sbjct: 83 ALGGAMALAADKGGIQFRILNSRKGAAVRATRAQADRVRFKAAIRHTLENQANLDIFQQA 142 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 E + + +V Q TVVLTTGTFL GVIHIG GR GD PS +L Sbjct: 143 ADDLIVEGDTVKGVVTQMGIRFDTKTVVLTTGTFLGGVIHIGLQNSSGGRAGDPPSIALA 202 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + + GRLKTGTP R+D +T+ + Q D SFM D + Q+ C I Sbjct: 203 HRLRELKLPVGRLKTGTPPRIDARTVDFSVMTPQPGDFPSPVMSFMGDASMHPEQVNCYI 262 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T T+ +TH II + S +Y+G I+ GPRYCPSIEDKI RF +++ HQ+FLEPEGL+T Sbjct: 263 THTSEKTHEIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFADKDSHQVFLEPEGLDT 322 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNGIST+LP ++Q +R+I G+E +I+RPGYAIEYDY NP+ L TLETK I Sbjct: 323 HELYPNGISTSLPFDVQFNLVRSIRGMENAHILRPGYAIEYDYFNPQALKFTLETKAIQN 382 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQINGTTGYEEA AQGL+AG+N+AR++ + + R +Y+GV++DDL + G E Sbjct: 383 LYFAGQINGTTGYEEAGAQGLLAGLNAARRAWEQEEWTPKRDQAYMGVLVDDLITLGTKE 442 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT IG +LG + + R +++ ++ S L+ L Sbjct: 443 PYRMFTSRAEYRLMLREDNADQRLTEIGRELGLVDDERWAAYSEKMEAVERETSRLQHLW 502 Query: 483 LTSKNLSS---TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 N ++ K +A + L P+ + + + + S V E+++I Sbjct: 503 AAPNNPMGKKFVEMTGADLSKECSAIDLLKRPNINFAQIAELT--GSEVSQQVGEQIEIA 560 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ + ++K E+ IP DF++ + LS E+ KL ++P L QAS+I Sbjct: 561 VKYEGYINRQHEDVAQLKRLEETKIPADFEFDGISGLSREITLKLKTVRPETLAQASRIP 620 Query: 600 GMTPAALNLLLIYIKKN 616 G+TPAA+ LL+I I+K+ Sbjct: 621 GVTPAAVQLLMITIRKS 637 >gi|291278440|ref|YP_003495275.1| glucose inhibited division protein A [Deferribacter desulfuricans SSM1] gi|290753142|dbj|BAI79519.1| glucose inhibited division protein A [Deferribacter desulfuricans SSM1] Length = 623 Score = 528 bits (1361), Expect = e-148, Method: Compositional matrix adjust. Identities = 293/630 (46%), Positives = 386/630 (61%), Gaps = 24/630 (3%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 +++YDVIV+G GHAGCEAA AA++GA T LIT TI MSCNPAIGGL KG++V+++ Sbjct: 6 DKTYDVIVVGAGHAGCEAALAAARMGAKTLLITIYVETIAQMSCNPAIGGLAKGNIVKDL 65 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G M + D GIQF+VLN KKGPAVR R QAD++LYR M ++ QENLDV QG Sbjct: 66 DALGGEMAKNIDETGIQFKVLNKKKGPAVRSSRAQADKKLYRERMISVLMDQENLDVKQG 125 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 V E +I+ +V+ + V+LTTGTFL G+IHIG + PAGR + S L Sbjct: 126 VVTDIVVENDIVKGVVVDYGLYFKSDKVILTTGTFLNGLIHIGDKRYPAGRANEFASVDL 185 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGI 242 + ++ F RLKTGTPARLD TI + E+Q D FSF + Q+ C I Sbjct: 186 AEALKRY-FPLERLKTGTPARLDADTINFSVLEEQPGDNEPKMFSFESKGPKLPQVSCYI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II EN+ S +Y+G IK GPRYCPSIEDK+ +F +++ HQIFLEPEGL++ Sbjct: 245 TYTNEKTHSIINENMHRSPLYAGVIKGIGPRYCPSIEDKVKKFPDKSRHQIFLEPEGLDS 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +Y NG S++LP ++Q R++ GLE V +RP YAIEYD++ P L+PTLETKKI G Sbjct: 305 REIYANGFSSSLPIDVQIAMYRSVKGLENVEFVRPAYAIEYDFVQPTNLYPTLETKKIKG 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQINGTTGYEEAA QG VA +N+ + + I R +SYIGVMIDDL +KGV E Sbjct: 365 LYFAGQINGTTGYEEAAGQGFVAAVNAVLSYDNKEFI-LGRDESYIGVMIDDLVTKGVDE 423 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYR+F SR+EYR+ LR DNA+ RL G LG I R+ R+ ++++E +K L Sbjct: 424 PYRVFHSRSEYRLLLREDNAEFRLISKGYDLGLI---RKSRYERFLREKEMFEKEMKRLD 480 Query: 483 LTSKN--------LSSTSISFKQDGKTRTAYEFLSYPDFS---IQNLFSICPDARKFSSL 531 N LS +I + E L P+ S I+ + + R Sbjct: 481 EIKVNPDKHNQDKLSKYNIKINNPVSLK---ELLRRPEVSYEIIKEFWGGVENER----- 532 Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 V E+++I Y Y +QM E + + E IP D+S + L E EK +KP Sbjct: 533 VAEQIEISVKYEGYIAKQMQEVERFRKIENVRIPDTLDFSKIKGLRREFIEKFERIKPKT 592 Query: 592 LLQASKIEGMTPAALNLLLIYIKKNTVKLN 621 L QAS+I G+TPAA++LL IYI+ K N Sbjct: 593 LGQASRIPGVTPAAISLLHIYIEDEKRKRN 622 >gi|169777055|ref|XP_001822993.1| translation optimization protein 1 [Aspergillus oryzae RIB40] gi|83771730|dbj|BAE61860.1| unnamed protein product [Aspergillus oryzae] Length = 688 Score = 528 bits (1361), Expect = e-148, Method: Compositional matrix adjust. Identities = 284/635 (44%), Positives = 390/635 (61%), Gaps = 23/635 (3%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 +R YDV+VIGGGHAG EA A AA+ GA TALIT S IG SCNP+ GG+GKG ++RE+ Sbjct: 35 SRPYDVVVIGGGHAGSEACAAAARSGARTALITPSLSNIGVCSCNPSFGGIGKGTMIREV 94 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DA+DG+ GR+ D AGI FR+LN KGPAV GPR Q DR+LY+ MQ E+L+ E L V++G Sbjct: 95 DAMDGVAGRIIDKAGIMFRILNRSKGPAVWGPRAQIDRDLYKKYMQEELLATEGLSVLEG 154 Query: 123 EVAGFNTEK----------NIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAG 172 +VA K I + ++ +I S VV+TTGTFL G IHIG P+G Sbjct: 155 KVADIVVSKEGVEDVPGAQGKIVGVRLESGEVIPTSRVVITTGTFLGGEIHIGMTVYPSG 214 Query: 173 RMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK 232 RMG++ + L S + F GRLKTGTP RLD KTI + E Q D PFS++ + Sbjct: 215 RMGEAATFGLSKSLREAGFQLGRLKTGTPPRLDAKTIDFKSLEVQKGDSPPQPFSYLNNT 274 Query: 233 IT---NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERN 289 + Q+ C +T TN +H II N+ S ++ GPRYCPS+E KI+RF ++ Sbjct: 275 VQVGDEGQLNCWMTHTNEASHDIIRANLDKSIHIRETVR--GPRYCPSLESKIIRFQDKQ 332 Query: 290 GHQIFLEPEGLN-TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINP 348 H I+LEPEG DV+YPNGIS +PE+ Q +RT+ GLE V +++PGY +EYDYI+P Sbjct: 333 RHLIWLEPEGFAPNDVIYPNGISMTVPEDAQFAMLRTVRGLENVRMLQPGYGVEYDYIDP 392 Query: 349 KELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYI 408 + L+PTLETK ISGL+LAGQINGTTGYEEA QG++AG N+ + + +R+D +I Sbjct: 393 RNLWPTLETKLISGLYLAGQINGTTGYEEATGQGIIAGTNAGLSAQGRSPLTLTRSDGFI 452 Query: 409 GVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYI 468 G+MIDDL +KGV EPYRMFT+R+EYRIS R DNAD RLT + G + ++R + F Sbjct: 453 GIMIDDLITKGVSEPYRMFTTRSEYRISTRSDNADLRLTRMARNAGVVSDKRWRHFTDTE 512 Query: 469 QEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI--CPDAR 526 + N L++LL + ++S S + D R+A + L + I L P + Sbjct: 513 AQINELQTLLANTRMSSNAWSRRGFKARVDTSIRSALDLLCLDEVEIDALIPHIESPSGK 572 Query: 527 -----KFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELK 581 F+ + R+ IE YA Y RQ ++ +E L+P D DYS + +S E K Sbjct: 573 VYTPSSFAPEIRSRVAIERRYAPYVARQETAVRKFLQDESLLLPPDLDYSKVKGISTEEK 632 Query: 582 EKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKN 616 + L ++P ++ A +IEG+TPA LL ++++ Sbjct: 633 QALERVRPVSVGMARRIEGVTPAGAIRLLAHVRRT 667 >gi|147679251|ref|YP_001213466.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pelotomaculum thermopropionicum SI] gi|205375704|sp|A5CY45|MNMG_PELTS RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|146275348|dbj|BAF61097.1| NAD/FAD-utilizing enzyme apparently [Pelotomaculum thermopropionicum SI] Length = 631 Score = 528 bits (1361), Expect = e-148, Method: Compositional matrix adjust. Identities = 272/620 (43%), Positives = 388/620 (62%), Gaps = 14/620 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDV+V+G GHAGCEA AA++G T ++T + M CNPA+GG KGHLVRE+DA Sbjct: 8 TYDVVVVGAGHAGCEAGLAAARMGCRTLVLTLNMDNVALMPCNPAVGGPAKGHLVREVDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G +G D A IQ R+LN KGPAV R QAD+ Y+L M++ + Q LD+ Q V Sbjct: 68 LGGEIGLNTDRASIQMRLLNTGKGPAVHALRAQADKRYYQLCMKKVLECQPGLDLKQALV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 EK + ++ + VVLTTGT+L+G I IG L P G G PS +L + Sbjct: 128 EKIMVEKGKVRGVLTSTGARFEAGAVVLTTGTYLKGRIIIGDLSFPGGPNGQFPSVTLSD 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 GR KTGTPAR+D +I + K Q D++ FSF+++ Q+ C +T Sbjct: 188 CLADLGIKLGRFKTGTPARVDRNSIDFSKMSIQPGDKKTHNFSFISEIKEREQLPCWLTY 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETHRII EN+ + +Y+G IKS GPRYCPSIE K+VRF ++ HQ+F+EPEG NT Sbjct: 248 TTEETHRIIRENLHRAPLYTGVIKSQGPRYCPSIETKVVRFSDKPAHQVFIEPEGRNTTE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+ST+LPE++Q +RT+PGLE+V ++RPGYAIEYDY+ +L P+LETK I GLF Sbjct: 308 MYVQGMSTSLPEDVQLAMLRTLPGLERVEMMRPGYAIEYDYVVATQLKPSLETKAIPGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAAAQG++AGIN+A + +R+++YIGV+IDDL +K + EPY Sbjct: 368 TAGQINGTSGYEEAAAQGIMAGINAALYVKNREPFILNRSEAYIGVLIDDLVTKEIDEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFL----RSLLKS 480 RM TSRAEYR+ LR DNAD RLT G K+G + +R+AKY ++ + + L K+ Sbjct: 428 RMLTSRAEYRLLLRQDNADLRLTEKGYKIGLVSP---ERYAKYERKKKLVEEERQRLEKT 484 Query: 481 LVLTSKNL-----SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIER 535 +V + ++ S Q G + L P+ ++L I + V E+ Sbjct: 485 MVAVGDEVKRVLEAANSPGLPQQGISLAG--LLRRPEIGYEHLLQIPGNHPDLPDEVREQ 542 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y +Q + ++ + E++ IP+D DY + LS E +EKL +++P ++ QA Sbjct: 543 VEIQIKYEGYIKKQQAQVEKFRRLEEKKIPQDIDYGRVRGLSVEAREKLEMIRPASIGQA 602 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G+TPA +++LLIY+++ Sbjct: 603 SRIAGVTPADVSVLLIYLER 622 >gi|238494138|ref|XP_002378305.1| mitochondrial translation optimization protein (Mto1), putative [Aspergillus flavus NRRL3357] gi|220694955|gb|EED51298.1| mitochondrial translation optimization protein (Mto1), putative [Aspergillus flavus NRRL3357] Length = 688 Score = 528 bits (1361), Expect = e-148, Method: Compositional matrix adjust. Identities = 284/635 (44%), Positives = 390/635 (61%), Gaps = 23/635 (3%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 +R YDV+VIGGGHAG EA A AA+ GA TALIT S IG SCNP+ GG+GKG ++RE+ Sbjct: 35 SRPYDVVVIGGGHAGSEACAAAARSGARTALITPSLSNIGVCSCNPSFGGIGKGTMIREV 94 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DA+DG+ GR+ D AGI FR+LN KGPAV GPR Q DR+LY+ MQ E+L+ E L V++G Sbjct: 95 DAMDGVAGRIIDKAGIMFRILNRSKGPAVWGPRAQIDRDLYKKYMQEELLATEGLSVLEG 154 Query: 123 EVAGFNTEK----------NIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAG 172 +VA K I + ++ +I S VV+TTGTFL G IHIG P+G Sbjct: 155 KVADIVVSKEGVEDVPGAQGKIVGVRLESGEVIPTSRVVITTGTFLGGEIHIGMTVYPSG 214 Query: 173 RMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK 232 RMG++ + L S + F GRLKTGTP RLD KTI + E Q D PFS++ + Sbjct: 215 RMGEAATFGLSKSLREAGFQLGRLKTGTPPRLDAKTIDFKSLEVQKGDSPPQPFSYLNNT 274 Query: 233 IT---NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERN 289 + Q+ C +T TN +H II N+ S ++ GPRYCPS+E KI+RF ++ Sbjct: 275 VQVGDEGQLNCWMTHTNEASHDIIRANLDKSIHIRETVR--GPRYCPSLESKIIRFQDKQ 332 Query: 290 GHQIFLEPEGLN-TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINP 348 H I+LEPEG DV+YPNGIS +PE+ Q +RT+ GLE V +++PGY +EYDYI+P Sbjct: 333 RHLIWLEPEGFAPNDVIYPNGISMTVPEDAQFAMLRTVRGLENVRMLQPGYGVEYDYIDP 392 Query: 349 KELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYI 408 + L+PTLETK ISGL+LAGQINGTTGYEEA QG++AG N+ + + +R+D +I Sbjct: 393 RNLWPTLETKLISGLYLAGQINGTTGYEEATGQGIIAGTNAGLSAQGRSPLTLTRSDGFI 452 Query: 409 GVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYI 468 G+MIDDL +KGV EPYRMFT+R+EYRIS R DNAD RLT + G + ++R + F Sbjct: 453 GIMIDDLITKGVSEPYRMFTTRSEYRISTRSDNADLRLTRMARNAGVVSDKRWRHFTDTE 512 Query: 469 QEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI--CPDAR 526 + N L++LL + ++S S + D R+A + L + I L P + Sbjct: 513 AQINELQTLLANTRMSSNAWSRRGFKARVDTSIRSALDLLCLDEVEIDALIPHIESPSGK 572 Query: 527 -----KFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELK 581 F+ + R+ IE YA Y RQ ++ +E L+P D DYS + +S E K Sbjct: 573 VYTPSSFAPEIRSRVAIERRYAPYVARQETAVRKFLQDESLLLPPDLDYSKVKGISTEEK 632 Query: 582 EKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKN 616 + L ++P ++ A +IEG+TPA LL ++++ Sbjct: 633 QALERVRPVSVGMARRIEGVTPAGAIRLLAHVRRT 667 >gi|331001497|ref|ZP_08325115.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Parasutterella excrementihominis YIT 11859] gi|329568226|gb|EGG50043.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Parasutterella excrementihominis YIT 11859] Length = 636 Score = 528 bits (1361), Expect = e-148, Method: Compositional matrix adjust. Identities = 291/623 (46%), Positives = 386/623 (61%), Gaps = 14/623 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 Y+VIV+GGG+AG EAAA A++ A T L+TH +G SCNP+IGG+GK HLV+E+DAL Sbjct: 9 YEVIVVGGGNAGIEAAAACARMKAKTLLVTHNLDNLGQQSCNPSIGGIGKSHLVKEVDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGL+ + D +GIQFRVLN KG AVR R Q DR LY+ M+ I + ENL +I+ V Sbjct: 69 DGLIAKATDFSGIQFRVLNASKGAAVRATRAQIDRRLYKYQMRTRIEAIENLSLIEEAVD 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E ++ + ++ I+ VVL GTFL G + IG+ AGR GD S +L + Sbjct: 129 ALLLENGKVAGVYLRSGISIKAKAVVLCAGTFLNGKVFIGQTSYLAGRSGDPSSVNLGIN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFM-TDKITNRQIECGIT 243 + RLKTGTPARLDG+TI + K E+Q D +P FS+M + + +Q+ C IT Sbjct: 189 LAELGLPKARLKTGTPARLDGRTIDFSKCERQLGDSEPVPVFSYMGSPEDHPQQVPCWIT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH I + + S +++G I+ GPRYCPSIEDKI +F +N H +FLEPEGLNT Sbjct: 249 DTNQTTHDFIRKGLDRSPLFTGVIEGIGPRYCPSIEDKIHKFASKNSHHVFLEPEGLNTY 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP ++Q FI +I GLE V+IIRPGYAIEYDY +P L LE+K+ L Sbjct: 309 EYYPNGISTSLPYDVQVNFIHSIKGLENVHIIRPGYAIEYDYYDPTHLKDNLESKEFDNL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 FLAGQ+NGTTGYEEAAAQGL+AGIN+ K + R +Y+GVM++DL +KGV EP Sbjct: 369 FLAGQVNGTTGYEEAAAQGLMAGINAVLKIRDEEPFLLRRDQAYLGVMVNDLITKGVNEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLT IG KLG + E R K F + + R LKS+ + Sbjct: 429 YRMFTSRAEYRLSLREDNADERLTEIGYKLGVVSEERWKFFQEKRERLARERERLKSIWV 488 Query: 484 TSKNLSSTSIS---FKQDGKTRTAYEFLSYPDFSIQNL--------FSICPDARKFSSLV 532 L S+ + K Y L P+ Q L S+ P S Sbjct: 489 NPGVLDKFSLEEVVGAELSKESQLYVMLKRPEVDYQKLKLLKTKDGESLLPPPY-LSDED 547 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 E L + Y+ Y +Q E ++ + + +IP+DFDY S LS E+ +KL +KP L Sbjct: 548 AETLTTKVKYSGYEDKQKAEVQKNLEKIETVIPEDFDYDSAKGLSFEITQKLKKIKPRTL 607 Query: 593 LQASKIEGMTPAALNLLLIYIKK 615 +A I G+TPAA+++LL+Y+K+ Sbjct: 608 GEALNISGVTPAAISILLVYLKR 630 >gi|15642768|ref|NP_232401.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae O1 biovar El Tor str. N16961] gi|147674621|ref|YP_001218410.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae O395] gi|153820114|ref|ZP_01972781.1| glucose inhibited division protein A [Vibrio cholerae NCTC 8457] gi|153821973|ref|ZP_01974640.1| glucose inhibited division protein A [Vibrio cholerae B33] gi|227082887|ref|YP_002811438.1| glucose inhibited division protein A [Vibrio cholerae M66-2] gi|229508288|ref|ZP_04397792.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae BX 330286] gi|229508640|ref|ZP_04398135.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae B33] gi|229517144|ref|ZP_04406590.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae RC9] gi|229520164|ref|ZP_04409591.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae TM 11079-80] gi|229606562|ref|YP_002877210.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae MJ-1236] gi|254291137|ref|ZP_04961934.1| glucose inhibited division protein A [Vibrio cholerae AM-19226] gi|254851566|ref|ZP_05240916.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae MO10] gi|255746815|ref|ZP_05420761.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholera CIRS 101] gi|262155895|ref|ZP_06029017.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae INDRE 91/1] gi|262167091|ref|ZP_06034806.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae RC27] gi|298501187|ref|ZP_07010986.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae MAK 757] gi|11386838|sp|Q9KNG4|MNMG_VIBCH RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|172047493|sp|A5F468|MNMG_VIBC3 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|254811522|sp|C3LSK0|MNMG_VIBCM RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|9657377|gb|AAF95914.1| glucose inhibited division protein A [Vibrio cholerae O1 biovar El Tor str. N16961] gi|126509345|gb|EAZ71939.1| glucose inhibited division protein A [Vibrio cholerae NCTC 8457] gi|126520512|gb|EAZ77735.1| glucose inhibited division protein A [Vibrio cholerae B33] gi|146316504|gb|ABQ21043.1| glucose inhibited division protein A [Vibrio cholerae O395] gi|150422982|gb|EDN14932.1| glucose inhibited division protein A [Vibrio cholerae AM-19226] gi|227010775|gb|ACP06987.1| glucose inhibited division protein A [Vibrio cholerae M66-2] gi|227011997|gb|ACP08207.1| glucose inhibited division protein A [Vibrio cholerae O395] gi|229342758|gb|EEO07749.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae TM 11079-80] gi|229346207|gb|EEO11179.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae RC9] gi|229354354|gb|EEO19282.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae B33] gi|229354561|gb|EEO19483.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae BX 330286] gi|229369217|gb|ACQ59640.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae MJ-1236] gi|254847271|gb|EET25685.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae MO10] gi|255735572|gb|EET90971.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholera CIRS 101] gi|262024477|gb|EEY43163.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae RC27] gi|262030347|gb|EEY48989.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae INDRE 91/1] gi|297540059|gb|EFH76121.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae MAK 757] Length = 631 Score = 528 bits (1361), Expect = e-148, Method: Compositional matrix adjust. Identities = 283/626 (45%), Positives = 385/626 (61%), Gaps = 15/626 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA AA+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHETFDVIVVGGGHAGTEAALAAARTGQRTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRNVLENTPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + I +V Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQAVDDVIVEHDHIRGVVTQMGLKFHAKAVVLTVGTFLGGKIHIGLENYAGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D ++ + E Q D FSFM + + RQI Sbjct: 182 ALAHRLRELPFRVDRLKTGTPPRIDANSVDFSVLEAQHGDNPTPVFSFMGKREHHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +++ HQIF+EPEG Sbjct: 242 CYITHTNERTHDVIRANLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADKDSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTTELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKY 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 IHGLFFAGQINGTTGYEEAAAQGLMAGLNASLYSQDKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG + + R RF + I R L+ Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLVDDARWARFNQKIDNMAKERQRLQ 481 Query: 480 SLVLTSKN--------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL 531 + + L T +S + G+ + L P+ + + L ++ A Sbjct: 482 ETWMNPNSVGVEQLNTLLKTPMSREASGE-----DLLRRPEMTYELLTTLPAFAPALEDA 536 Query: 532 -VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 E+++I+ Y Y RQ E ++ E +P + DY + LSNE+ KL+ KP Sbjct: 537 EAAEQVEIQVKYDGYIQRQQDEIEKSLRHEHTKLPAELDYKQVKGLSNEVVLKLNAAKPE 596 Query: 591 NLLQASKIEGMTPAALNLLLIYIKKN 616 + AS+I G+TPAA+++LL+++KK+ Sbjct: 597 TIGIASRISGITPAAISILLVHLKKH 622 >gi|329925075|ref|ZP_08280019.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Paenibacillus sp. HGF5] gi|328940194|gb|EGG36526.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Paenibacillus sp. HGF5] Length = 628 Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust. Identities = 276/617 (44%), Positives = 389/617 (63%), Gaps = 12/617 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAGCEAA +A++GA T ++T + M CNP+IGG KGH+VREIDA Sbjct: 7 TYDVIVVGAGHAGCEAALASARMGAETLMVTINLDMVAFMPCNPSIGGPAKGHVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAV R QAD+ Y+ M+ + +E L + QG V Sbjct: 67 LGGEMGRNIDKTFIQMRMLNTGKGPAVYALRAQADKFSYQHTMKETMEKEEKLTLRQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + IV Q + R VVLTTGT+LRG + +G+L +G PS L + Sbjct: 127 DQLIVEDGVCVGIVTQTGTEYRAKAVVLTTGTYLRGKVIMGELMYESGPNNQQPSVKLAH 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + + FD R KTGTP R+ TI + KTE Q DE FS+ T N Q+ C +T Sbjct: 187 NLRELGFDLVRFKTGTPPRVHKDTIDFSKTEIQPGDENPKFFSYETKSSDNEQLPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+++TH+II +N+ + ++SG I+ GPRYCPSIEDKIVRF ++ HQIFLEPEG NT Sbjct: 247 TSVDTHKIINDNLHRAPMFSGVIEGTGPRYCPSIEDKIVRFADKPKHQIFLEPEGKNTKE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 Y G+ST++PE++Q +R+IPG+EKV ++R GYAIEYD + P +L+P+LETKK+ GLF Sbjct: 307 YYVQGLSTSMPEDVQLAVLRSIPGMEKVEMMRNGYAIEYDAMVPTQLWPSLETKKLPGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QG++AGIN+ARK + + R+ YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGIMAGINAARKVQGKEPVILDRSQGYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYI-------QEYNFLRSL 477 R+ TSRAEYR+ LR DNAD RLT IG +G I E +R+AK++ QE LR Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEIGHDIGLISE---ERYAKFLLKKQLVEQEIERLRQT 483 Query: 478 LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 V + L + + DG L P+ + + S+ P + + E+++ Sbjct: 484 KVKPVEVNAMLEAAGSAPIVDGSNMLT--ILRRPEITFAMVESLSPSPYELDEEMKEQVE 541 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ YA Y +Q+ ++++ EK+ IP+D Y + L+ E ++KL+ ++P ++ QAS+ Sbjct: 542 IQIKYAGYIEKQLGHVEKLQKMEKKRIPEDIVYDEINGLAMEARQKLNKIRPISIGQASR 601 Query: 598 IEGMTPAALNLLLIYIK 614 I G+TPA +++LL+Y++ Sbjct: 602 IAGVTPADISILLVYLE 618 >gi|294649953|ref|ZP_06727345.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Acinetobacter haemolyticus ATCC 19194] gi|292824182|gb|EFF82993.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Acinetobacter haemolyticus ATCC 19194] Length = 661 Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust. Identities = 286/617 (46%), Positives = 385/617 (62%), Gaps = 6/617 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GK HLVREID Sbjct: 40 KVYDVIVIGGGHAGTEAALAAARMGRQTLLLTHNIETLGQMSCNPAIGGIGKSHLVREID 99 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M AD GIQFR+LN +KG AVR R QADR ++ A++ + +Q NLD+ Q Sbjct: 100 ALGGAMALAADKGGIQFRILNSRKGAAVRATRAQADRVRFKAAIRHTLENQANLDIFQQA 159 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 E + + +V Q TVVLTTGTFL GVIHIG GR GD PS +L Sbjct: 160 ADDLIVEGDTVKGVVTQMGIRFDTKTVVLTTGTFLGGVIHIGLQNSSGGRAGDPPSIALA 219 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + + GRLKTGTP R+D +T+ + Q D SFM D + Q+ C I Sbjct: 220 HRLRELKLPVGRLKTGTPPRIDARTVDFSVMTPQPGDFPSPVMSFMGDASMHPEQVNCYI 279 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T T+ +TH II + S +Y+G I+ GPRYCPSIEDKI RF +++ HQ+FLEPEGL+T Sbjct: 280 THTSEKTHEIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFADKDSHQVFLEPEGLDT 339 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNGIST+LP ++Q +R+I G+E +I+RPGYAIEYDY NP+ L TLETK I Sbjct: 340 HELYPNGISTSLPFDVQFNLVRSIRGMENAHILRPGYAIEYDYFNPQALKFTLETKAIQN 399 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQINGTTGYEEA AQGL+AG+N+AR++ + + R +Y+GV++DDL + G E Sbjct: 400 LYFAGQINGTTGYEEAGAQGLLAGLNAARRAWEQEEWTPKRDQAYMGVLVDDLITLGTKE 459 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT IG +LG + + R +++ ++ S L+ L Sbjct: 460 PYRMFTSRAEYRLMLREDNADQRLTEIGRELGLVDDERWAAYSEKMEAVERETSRLQHLW 519 Query: 483 LTSKNLSS---TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 N ++ K +A + L P+ + + + + S V E+++I Sbjct: 520 AAPNNPMGKKFVEMTGADLSKECSAIDLLKRPNINFAQIAELT--GSEVSQQVGEQIEIA 577 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ + ++K E+ IP DF++ + LS E+ KL ++P L QAS+I Sbjct: 578 VKYEGYINRQHEDVAQLKRLEETKIPADFEFDGISGLSREITLKLKTVRPETLAQASRIP 637 Query: 600 GMTPAALNLLLIYIKKN 616 G+TPAA+ LL+I I+K+ Sbjct: 638 GVTPAAVQLLMITIRKS 654 >gi|325129111|gb|EGC51960.1| glucose-inhibited division protein A [Neisseria meningitidis N1568] Length = 628 Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust. Identities = 287/621 (46%), Positives = 392/621 (63%), Gaps = 12/621 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 5 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY+ A++ + +QENLD+ Q Sbjct: 65 ALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKAAIREMLENQENLDLFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + + IS ++ + VVLT GTFL G IHIG GR GD + SL Sbjct: 125 VEDVTLDGDRISGVITAMGVEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT----DKITNRQIE 239 + + GRLKTGTP R+DG+TI + + +Q D P M+ ++ RQ+ Sbjct: 185 GRLRELNLPQGRLKTGTPPRIDGRTIDFSQLTEQPGD---TPVPVMSVRGNAEMHPRQVS 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEG Sbjct: 242 CWITHTNTQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 302 LTTHEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKT 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG N+ + + D + R +Y+GV++DDL +KG Sbjct: 362 IEGLFFAGQINGTTGYEEAAAQGLLAGANAVQYVREQDPLLLRREQAYLGVLVDDLITKG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 V EPYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + + LK Sbjct: 422 VNEPYRMFTSRAEYRLQLREDNADMRLTEDGYKIGLVGEEQWRMFNEKREAVEREIQRLK 481 Query: 480 SLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI--CPDARKFSSLVIE 534 + T + L+ + ++ + ++ L P+ L ++ + + S+ V+E Sbjct: 482 TTWYTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYGALMTLEGAMPSERLSAEVVE 541 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E + E +P D DYS + LS E+++KL+ KP + Q Sbjct: 542 QVEIQVKYQGYIDRQNEEIDSRRDIETLKLPDDIDYSKVKGLSAEVQQKLNQHKPETVGQ 601 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G+TPAA+ LL++++K+ Sbjct: 602 ASRISGVTPAAVALLMVHLKR 622 >gi|319940689|ref|ZP_08015031.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Sutterella wadsworthensis 3_1_45B] gi|319805840|gb|EFW02607.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Sutterella wadsworthensis 3_1_45B] Length = 647 Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust. Identities = 290/626 (46%), Positives = 397/626 (63%), Gaps = 18/626 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIVIG GHAG EAA +A++G ST L+TH T+G +SCNP+IGG+GKGHLV+E+DA Sbjct: 6 NFDVIVIGCGHAGAEAALASARMGCSTLLVTHNLDTVGQLSCNPSIGGIGKGHLVKELDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+V D +GIQFR+LN KG AV R Q DR+LYR AM++ I SQENL V Q V Sbjct: 66 LGGTMGQVTDESGIQFRILNRSKGAAVHASRAQIDRQLYRRAMRKRIESQENLKVFQMAV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E +V VVL+ GTFL G++HIG AGRMGD S L Sbjct: 126 DDLLVENGCARGVVTNTGIRFHSKAVVLSAGTFLNGLVHIGLEHFTAGRMGDPASVRLGE 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQIECGI 242 + GRLKTGTP R+D +TI + + E Q+ D P FS M T+ Q+ C I Sbjct: 186 RLKELGLPQGRLKTGTPCRIDARTIDFSRCEIQWGDLNPTPSFSLMQPTATHPEQMPCWI 245 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T T E H +I+ N+ S +Y+G I+ GPRYCPSIEDK+ RF E++ HQ+FLEPEG++ Sbjct: 246 THTTREMHELILANLDRSPMYAGVIQGIGPRYCPSIEDKVKRFAEKDSHQVFLEPEGIHV 305 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 YPNGIST+LP ++Q + + +PGLEK ++ RPGYAIEYDY +P+EL + E+K + G Sbjct: 306 REYYPNGISTSLPFDVQLKMVHMMPGLEKAHLTRPGYAIEYDYYDPRELKRSFESKVMEG 365 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AG N+A + D R ++Y+GVM DDLT+KGV E Sbjct: 366 LFCAGQINGTTGYEEAAAQGLLAGANAALYARGDDAWTPRRDEAYLGVMADDLTTKGVTE 425 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR++LR DNAD RLTPIG KLG + + R + F + + L+ Sbjct: 426 PYRMFTSRAEYRLNLREDNADTRLTPIGRKLGLVDDARWEFFCRKTERIERAMEALRETW 485 Query: 483 LTSKNLSSTS------ISFKQDGKTRTAYEFLSYPDFSIQNLFSICPD----ARKFSSLV 532 + K + ++ +++ R+ L+ P+ ++++L ++ A FS L Sbjct: 486 VNPKLIERAEAERVLGVAIEREYSLRS---LLARPNVTMESLMTLKRTDGSLAHDFSELN 542 Query: 533 IE---RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 E R+++E YA Y RQ E ++ E +IP++ DY + LS E+++KL +P Sbjct: 543 KEEQSRVEVEVKYAGYIDRQKDEIQKTLANETLVIPREMDYDQVMGLSFEVRQKLKAAQP 602 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKK 615 + QAS+I G+TPAA+ LLL+++K+ Sbjct: 603 ETVGQASRISGVTPAAVALLLVHLKR 628 >gi|169409548|gb|ACA57894.1| mitochondrial translation optimization 1 homolog isoform b (predicted) [Callicebus moloch] Length = 690 Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust. Identities = 292/630 (46%), Positives = 411/630 (65%), Gaps = 25/630 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA+ G+ T L+TH+ TIG MSCNP+ GG+GKGHL+RE+DAL Sbjct: 37 FDVIVIGGGHAGTEAATAAARCGSRTLLLTHRVDTIGQMSCNPSFGGIGKGHLMREVDAL 96 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGL R+ D +G+ ++VLN KGPAV G R Q DR+LY+ MQ+EILS L V +G V Sbjct: 97 DGLCSRICDQSGVHYKVLNRCKGPAVWGLRAQIDRKLYKQNMQKEILSTPLLTVQEGAVE 156 Query: 126 GF--------NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 +T K +S +V+ D S + +V+LTTGTFLRG+I IG PAGR+GD Sbjct: 157 DLILTEPEPEHTGKCRVSGVVLVDGSTVYSESVILTTGTFLRGMIVIGLEMHPAGRLGDQ 216 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR- 236 PS L + K F GRLKTGTP R+ ++I + KQ D +PFSFM + + + Sbjct: 217 PSIGLAQTLEKLGFVLGRLKTGTPPRIAKESINFSILNKQTPDNPSLPFSFMNETVWIKP 276 Query: 237 --QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 Q+ C +T TN I+++N+ ++ I+ GPRYCPSIE K++RF R HQ++ Sbjct: 277 EDQLPCYLTHTNSRVDEIVLKNLHLNSHVKETIR--GPRYCPSIESKVLRFPNRQ-HQVW 333 Query: 295 LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT 354 LEPEG+++D++YP G+S LP E+Q + I I GLEK +I+PGY ++YDY++P+++ P+ Sbjct: 334 LEPEGMDSDLIYPQGLSVTLPAELQEKIITCIRGLEKAKVIQPGYGVQYDYLDPRQITPS 393 Query: 355 LETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDD 414 LET + LF AGQINGTTGYEEAAAQG++AGIN++ + N+ SRT+ YIGV+IDD Sbjct: 394 LETHLVQRLFFAGQINGTTGYEEAAAQGVIAGINASLRINQKPPFVVSRTEGYIGVLIDD 453 Query: 415 LTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMK-LGCIGERRQKRFAKYIQEYNF 473 LT+ G EPYRMFTSR E+R+SLRPDNAD+RLT G K GC+ ++R +R Sbjct: 454 LTTLGTSEPYRMFTSRVEFRLSLRPDNADSRLTLRGYKEAGCVSQQRYERACWMKSSLEE 513 Query: 474 LRSLLKSLVLTS---KNL-SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA-RKF 528 S+LKS+ +S KNL SIS + R A + L Y + + +L P+ +K+ Sbjct: 514 GISVLKSIEFSSSKWKNLIPQASISTSRSLPVR-ALDVLKYEEVDMDSLAKAVPEPLKKY 572 Query: 529 SSL--VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLP--ALSNELKEKL 584 + + ERL+IE++Y + Q+ E KE++ +E +PKD DY ++ +LS+E++EKL Sbjct: 573 TKCRELAERLKIEATYESVLFHQLQEIKEVQRDEALQLPKDLDYLTVRDVSLSDEVREKL 632 Query: 585 SILKPFNLLQASKIEGMTPAALNLLLIYIK 614 +P + AS+I G+TPAA+ LL ++K Sbjct: 633 HFSRPQTIGAASRIPGVTPAAIINLLRFVK 662 >gi|153212965|ref|ZP_01948559.1| glucose inhibited division protein A [Vibrio cholerae 1587] gi|153829679|ref|ZP_01982346.1| glucose inhibited division protein A [Vibrio cholerae 623-39] gi|124116191|gb|EAY35011.1| glucose inhibited division protein A [Vibrio cholerae 1587] gi|148874855|gb|EDL72990.1| glucose inhibited division protein A [Vibrio cholerae 623-39] Length = 631 Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust. Identities = 283/626 (45%), Positives = 385/626 (61%), Gaps = 15/626 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA AA+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHETFDVIVVGGGHAGTEAALAAARTGQRTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRNVLENTPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + I +V Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQAVDDVIVEHDHIRGVVTQMGLKFHAKAVVLTVGTFLGGKIHIGLENYAGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D ++ + E Q D FSFM + + RQI Sbjct: 182 ALAHRLRELPFRVDRLKTGTPPRIDANSVDFSVLEAQHGDNPTPVFSFMGKREHHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +++ HQIF+EPEG Sbjct: 242 CYITHTNERTHDVIRANLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADKDSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTTELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 IHGLFFAGQINGTTGYEEAAAQGLMAGLNASLYSQDKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG + + R RF + I R L+ Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLVDDARWARFNQKIDNMAKERQRLQ 481 Query: 480 SLVLTSKN--------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL 531 + + L T +S + G+ + L P+ + + L ++ A Sbjct: 482 ETWMNPNSVGVEQLNTLLKTPMSREASGE-----DLLRRPEMTYELLTTLPAFAPALEDA 536 Query: 532 -VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 E+++I+ Y Y RQ E ++ E +P + DY + LSNE+ KL+ KP Sbjct: 537 EAAEQVEIQVKYDGYIQRQQDEIEKSLRHEHTKLPAELDYKQVKGLSNEVVLKLNAAKPE 596 Query: 591 NLLQASKIEGMTPAALNLLLIYIKKN 616 + AS+I G+TPAA+++LL+++KK+ Sbjct: 597 TIGIASRISGITPAAISILLVHLKKH 622 >gi|219681390|ref|YP_002467775.1| glucose-inhibited division protein A [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|257471063|ref|ZP_05635062.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|254811506|sp|B8D8G6|MNMG_BUCA5 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|219624233|gb|ACL30388.1| glucose-inhibited division protein A [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] Length = 628 Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust. Identities = 291/626 (46%), Positives = 396/626 (63%), Gaps = 15/626 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R++DVIV+G GHAG EAA ++++G T L+T K S +G++SCNPAIGG+GK HLV+EID Sbjct: 5 RNFDVIVVGAGHAGTEAAMASSRMGCKTLLLTQKISDLGALSCNPAIGGIGKSHLVKEID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G+M + D +GIQFR+LN KGPAVR R QAD+ LY +++ + Q NL +++ E Sbjct: 65 ALGGMMAKAIDYSGIQFRILNSSKGPAVRSTRAQADKILYHETVKKILKKQNNLLILEAE 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + + ++ Q+ +VVL GTFL G IHIG AGR+GD + L Sbjct: 125 VKDLIFKNYSVVGVLTQNEINFYSRSVVLAAGTFLGGKIHIGLKSYSAGRIGDKSAIDLS 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGI 242 + RLKTGTP R+D T+ ++ Q +D + FSFM + + +QI C + Sbjct: 185 VRLRELSLRVNRLKTGTPPRIDINTVNFNNLLIQNSDTPVPVFSFMGNVSHHPKQIPCYL 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II +N+ S IY+G +K GPRYCPSIEDKIVRF +R HQ+FLEPEGL++ Sbjct: 245 THTNEKTHEIIRKNLDKSPIYTGFLKGLGPRYCPSIEDKIVRFPDRKSHQVFLEPEGLSS 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 VYPNGIST+LP E+Q Q + +I GLEK IIRPGYAIEYD+ +PK+L TLE+K I G Sbjct: 305 IKVYPNGISTSLPIEVQEQIVASIKGLEKSKIIRPGYAIEYDFFDPKDLNLTLESKLIKG 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAA+QGL+AG+N+A S + R +Y+GV+IDDLT++G E Sbjct: 365 LFFAGQINGTTGYEEAASQGLLAGLNAALSSKNTEGWFPRRDQAYLGVLIDDLTTQGTEE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYI----QEYNFLR--- 475 PYRMFTSRAEYR+SLR DNAD RLT IG KLG + + R R+ + + E N L+ Sbjct: 425 PYRMFTSRAEYRLSLREDNADLRLTEIGRKLGLVNDSRWIRYNQKVLNIQTEMNRLKKNK 484 Query: 476 -SLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VI 533 S + K L + S+ K + E L P Q+L S+ L I Sbjct: 485 ISPISPDADILKKLYNISLI-----KEISMSELLKRPQIRYQDLQSLESFRTGIVDLEAI 539 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 +++ E YA Y RQ E + E + DY+ + LS+E+ +KL+ KP ++ Sbjct: 540 GQIENEIKYAGYIKRQSEEIERHLKNENTFLSSICDYNKIRGLSSEVVKKLNDYKPISIG 599 Query: 594 QASKIEGMTPAALNLLLIYIKKNTVK 619 QAS+I G+TPAA+++LLI++KK + K Sbjct: 600 QASRISGITPAAISILLIHLKKESYK 625 >gi|325145389|gb|EGC67666.1| glucose-inhibited division protein A [Neisseria meningitidis M01-240013] Length = 628 Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust. Identities = 286/621 (46%), Positives = 394/621 (63%), Gaps = 12/621 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L++H T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 5 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLSHNIETLGQMSCNPSIGGIGKGHLVRELD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY+ A++ + +QENLD+ Q Sbjct: 65 ALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKAAIREMLENQENLDLFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + + IS ++ + VVLT GTFL G IHIG GR GD + SL Sbjct: 125 VEDVTLDGDRISGVITAMGVEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT----DKITNRQIE 239 + + GRLKTGTP R+DG+TI + + +Q D P M+ ++ RQ+ Sbjct: 185 GRLRELNLPQGRLKTGTPPRIDGRTIDFSQLTEQPGD---TPVPVMSVRGNAEMHPRQVS 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEG Sbjct: 242 CWITHTNTQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 302 LTTHEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKT 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I+GLF AGQINGTTGYEEAAAQGL+AG N+ + + D + R +Y+GV++DDL +KG Sbjct: 362 IAGLFFAGQINGTTGYEEAAAQGLLAGANAVQYVREQDPLLLRREQAYLGVLVDDLITKG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 V EPYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + + LK Sbjct: 422 VNEPYRMFTSRAEYRLQLREDNADMRLTEDGYKIGLVGEAQWRMFNEKREAIEREIQRLK 481 Query: 480 SLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI--CPDARKFSSLVIE 534 + T + L+ + ++ + ++ L P+ L ++ + + S+ V+E Sbjct: 482 TTWYTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGAMPSERLSAEVVE 541 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E + E +P+D DYS + LS E+++KL+ KP + Q Sbjct: 542 QVEIQVKYQGYIDRQNEEIDSRRDIETLKLPEDIDYSKVKGLSAEVQQKLNQHKPETVGQ 601 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G+TPAA+ LL++++K+ Sbjct: 602 ASRISGVTPAAVALLMVHLKR 622 >gi|319639636|ref|ZP_07994383.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Neisseria mucosa C102] gi|317399207|gb|EFV79881.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Neisseria mucosa C102] Length = 631 Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust. Identities = 289/622 (46%), Positives = 394/622 (63%), Gaps = 14/622 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L++H T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 8 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLSHNIETLGQMSCNPSIGGIGKGHLVRELD 67 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D + IQFR LN KG AVR R QADR LY+ A++ + +QENL++ Q Sbjct: 68 ALGGAMALATDKSSIQFRRLNASKGAAVRATRAQADRILYKAAIREMLENQENLELFQQA 127 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + IS +V + S VVLT GTFL G IHIG GR GD + SL Sbjct: 128 VEDVTLDGERISGVVTAMGVEFKASAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 187 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK----ITNRQIE 239 + + GRLKTGTP R+DG+TI + + +Q D P M+ + + RQ+ Sbjct: 188 GRLRELNLPQGRLKTGTPPRIDGRTIDFSQLTEQPGD---TPVPVMSVRGSADMHPRQVS 244 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEG Sbjct: 245 CWITHTNTQTHEIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEG 304 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 305 LTTHEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKT 364 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG N+ + + D + R +Y+GV++DDL +KG Sbjct: 365 IQGLFFAGQINGTTGYEEAAAQGLLAGANAVQYVREQDPLLLRREQAYLGVLVDDLITKG 424 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 V EPYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + + LK Sbjct: 425 VNEPYRMFTSRAEYRLQLREDNADMRLTEDGYKIGLVGEEQWRMFNEKREAIEREIQRLK 484 Query: 480 SLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL---VI 533 + T + L+ + ++ + ++ L P+ L ++ PDA+ ++L V+ Sbjct: 485 TTWYTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTL-PDAQPETALADSVV 543 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I+ Y Y RQ E + E +P D DYS + LS E+++KL+ KP + Sbjct: 544 EQVEIQVKYQGYIDRQNEEIDSRRDIETLKLPDDIDYSKVKGLSAEVQQKLNQHKPETVG 603 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I G+TPAA+ LL++++K+ Sbjct: 604 QASRISGVTPAAVALLMVHLKR 625 >gi|166092135|gb|ABY82114.1| mitochondrial translation optimization 1 homolog isoform b (predicted) [Callithrix jacchus] Length = 703 Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust. Identities = 291/630 (46%), Positives = 410/630 (65%), Gaps = 25/630 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA+ G+ T L+TH+ TIG MSCNP+ GG+GKGHL+RE+DAL Sbjct: 37 FDVIVIGGGHAGTEAATAAARCGSRTLLLTHRVDTIGQMSCNPSFGGIGKGHLMREVDAL 96 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGL R+ D +G+ ++VLN KGPAV G R Q DR+LY+ MQ+EILS L V +G V Sbjct: 97 DGLCSRICDQSGVHYKVLNRCKGPAVWGLRAQIDRKLYKQNMQKEILSTPLLTVQEGAVE 156 Query: 126 GF--------NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 +T K +S +++ D S + +V+LTTGTFLRG+I IG PAGR+GD Sbjct: 157 DLILTEPEPEHTGKCRVSGVILVDGSTVYSESVILTTGTFLRGMIVIGLEMHPAGRLGDQ 216 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR- 236 PS L + K F GRLKTGTP R+ +I + KQ D +PFSFM + + + Sbjct: 217 PSIGLAQTLEKLGFVVGRLKTGTPPRIAKDSINFSILNKQTPDNPSLPFSFMNETVWIKP 276 Query: 237 --QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 Q+ C +T TN I+++N+ ++ I+ GPRYCPSIE K++RF R HQ++ Sbjct: 277 EDQLPCYLTHTNPRVDEIVLKNLHLNSHVKETIR--GPRYCPSIESKVLRFPNRQ-HQVW 333 Query: 295 LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT 354 LEPEG+++D++YP G+S LP E+Q + I I GLEK +I+PGY ++YDY++P+++ P+ Sbjct: 334 LEPEGMDSDLIYPQGLSMTLPAELQEKMITCIRGLEKAKVIQPGYGVQYDYLDPRQITPS 393 Query: 355 LETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDD 414 LET + LF AGQINGTTGYEEAAAQG++AGIN++ + N+ SRT+ YIGV+IDD Sbjct: 394 LETHLVQRLFFAGQINGTTGYEEAAAQGVIAGINASLRVNRKPPFVVSRTEGYIGVLIDD 453 Query: 415 LTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMK-LGCIGERRQKRFAKYIQEYNF 473 LT+ G EPYRMFTSR E+R+SLRPDNAD+RLT G K GC+ ++R +R Sbjct: 454 LTTLGTSEPYRMFTSRVEFRLSLRPDNADSRLTLRGYKEAGCVSQQRYERACWMKSSLEE 513 Query: 474 LRSLLKSLVLTS---KNL-SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA-RKF 528 S+LKS+ +S KNL SIS + R A + L Y + + +L P+ +K+ Sbjct: 514 GISVLKSIEFSSSKWKNLIPEASISTSRSLPVR-ALDVLKYEEVDVDSLAKAVPEPLKKY 572 Query: 529 SSL--VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLP--ALSNELKEKL 584 + + ERL+IE++Y + Q+ E KE++ +E +PKD DY ++ +LS+E++EKL Sbjct: 573 TKCRELAERLKIEATYESVLFHQLQEIKEVQRDEALQLPKDLDYLTVRDVSLSHEVREKL 632 Query: 585 SILKPFNLLQASKIEGMTPAALNLLLIYIK 614 +P + AS+I G+TPAA+ LL ++K Sbjct: 633 HFSRPQTIGAASRIPGVTPAAIINLLRFVK 662 >gi|299541771|ref|ZP_07052094.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lysinibacillus fusiformis ZC1] gi|298725509|gb|EFI66150.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lysinibacillus fusiformis ZC1] Length = 630 Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust. Identities = 283/622 (45%), Positives = 399/622 (64%), Gaps = 13/622 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIVIG GHAG EAA AAK+GAST ++T I M CNP+IGG KG +VREIDA Sbjct: 9 TFDVIVIGAGHAGSEAAHAAAKMGASTLMLTINLDMIAFMPCNPSIGGPAKGIVVREIDA 68 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G+MG+V D IQ R+LN KGPAVR R QAD+ LY+ M+R + NL + QG V Sbjct: 69 LGGVMGKVIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVLEETPNLTIHQGMV 128 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ Q ++ R TVV+TTGTFLRG I IG +K +G PS L + Sbjct: 129 EELIIEDGEVKGVITQIGAVYRAKTVVVTTGTFLRGEIIIGDIKYSSGPNNQQPSIRLAD 188 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + + FD R KTGTP R++ +TI +DKTE Q D+ FSF T + Q+ C +T Sbjct: 189 NLKELGFDLVRFKTGTPPRVNNRTINYDKTEIQPGDDVPRAFSFETTEFIMDQLPCWLTY 248 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETH II N+ S +YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 249 TSPETHEIIEANLHLSPMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTRE 308 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE +Q + +++IPGLE ++R GYAIEYD I P +L+PTLETK+I GL+ Sbjct: 309 VYVQGLSTSLPEHVQTRLLKSIPGLENAEMMRAGYAIEYDSIVPTQLWPTLETKRIKGLY 368 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAAAQGL+AG+N+A D + SR+D+YIGV+IDDL +KG EPY Sbjct: 369 TAGQINGTSGYEEAAAQGLMAGMNAAANVLGKDELILSRSDAYIGVLIDDLVTKGTNEPY 428 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL--V 482 R+ TSRAEYR+ LR DNAD RL + +G I Q+R+A + ++ + + + L V Sbjct: 429 RLLTSRAEYRLLLRHDNADLRLVELAYNMGMI---PQERYASFNEKKELIENEIARLREV 485 Query: 483 LTSKNLSSTSI------SFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 + N ++ S+ S +DG R A + L P+ + + S+ P + + V E++ Sbjct: 486 IIKPNEATQSVIRSVGGSELKDG-IRGA-DLLKRPEMHYELISSLIPAEIELADEVKEQI 543 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y Y + + + +++ E + IP++ DY ++ L+ E ++KL + P ++ QAS Sbjct: 544 EIQLKYEGYIEKALQQVEKLHKMENKKIPENIDYDAISGLATEARQKLKQVTPLSIAQAS 603 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+ PA +++LL+YI++ + Sbjct: 604 RISGVNPADISILLVYIEQGKI 625 >gi|325131023|gb|EGC53749.1| glucose-inhibited division protein A [Neisseria meningitidis OX99.30304] Length = 628 Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust. Identities = 287/621 (46%), Positives = 392/621 (63%), Gaps = 12/621 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 5 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY+ A++ + +QENLD+ Q Sbjct: 65 ALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKAAIREMLENQENLDLFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + IS ++ + VVLT GTFL G IHIG GR GD + SL Sbjct: 125 VEDVTLDGERISGVITAMGVEFKARAVVLTAGTFLSGKIHIGLEHYEGGRAGDPAAKSLG 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT----DKITNRQIE 239 + GRLKTGTP R+DG+TI + + +Q D P M+ ++ RQ+ Sbjct: 185 GRLRELKLPQGRLKTGTPPRIDGRTIDFSQLTEQPGD---TPVPVMSVRGNAEMHPRQVS 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEG Sbjct: 242 CWITHTNTQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 302 LTTHEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKT 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I+GLF AGQINGTTGYEEAAAQGL+AG N+ + + D + R +Y+GV++DDL +KG Sbjct: 362 IAGLFFAGQINGTTGYEEAAAQGLLAGANAVQYVREQDPLLLRREQAYLGVLVDDLITKG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 V EPYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + + LK Sbjct: 422 VNEPYRMFTSRAEYRLQLREDNADMRLTEDGYKIGLVGEAQWRMFNEKREAIEREIQRLK 481 Query: 480 SLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI--CPDARKFSSLVIE 534 + T + L+ + ++ + ++ L P+ L ++ + + S+ V+E Sbjct: 482 TTWYTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGAMPSERLSAEVVE 541 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E + E +P+D DYS + LS E+++KL+ KP + Q Sbjct: 542 QVEIQVKYQGYIDRQNEEIDSRRDIETLKLPEDIDYSKVKGLSAEVQQKLNQHKPETVGQ 601 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G+TPAA+ LL++++K+ Sbjct: 602 ASRISGVTPAAVALLMVHLKR 622 >gi|212702493|ref|ZP_03310621.1| hypothetical protein DESPIG_00510 [Desulfovibrio piger ATCC 29098] gi|212674154|gb|EEB34637.1| hypothetical protein DESPIG_00510 [Desulfovibrio piger ATCC 29098] Length = 643 Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust. Identities = 284/624 (45%), Positives = 376/624 (60%), Gaps = 15/624 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D IV GGGHAG EAA A+LG S LI+ +G +SCNPAIGGL KGH+VREIDAL Sbjct: 10 FDCIVTGGGHAGSEAAVALARLGLSVLLISGNVDRLGYLSCNPAIGGLAKGHMVREIDAL 69 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+MG ADA GIQFR LN+ KGPAVR R Q DRE Y+ +++ + S L + Q V Sbjct: 70 GGMMGLWADAGGIQFRTLNMSKGPAVRATRAQIDREAYQKVLKKTLFSTPGLRIWQDSVT 129 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E S + V+LTTGTFL G+IHIG +P GR+GD+P+ L +S Sbjct: 130 EVLEENGHASGVRTAQGLTFHARHVLLTTGTFLAGLIHIGLTHLPGGRLGDAPATGLSDS 189 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + GRLKTGT RL +I + K E+Q D FSF Q+ C IT T Sbjct: 190 LRRLGLTLGRLKTGTTPRLLRASIDFSKLEEQPGDTPPPRFSFRGPGPVLPQVPCHITWT 249 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N H I S +++G I+ G RYCPSIEDK+ RF ER HQIFLEPEGL++ V Sbjct: 250 NEAAHAAIRSGFDRSPLFTGVIQGTGARYCPSIEDKVARFPERERHQIFLEPEGLDSPEV 309 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NGIST+LP ++Q I IPGLE ++RPGYAIEYDY NP +L TLETK + GL+L Sbjct: 310 YANGISTSLPLDVQQAMIHAIPGLEHAVMVRPGYAIEYDYANPVQLHGTLETKALPGLWL 369 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGT+GYEEAAAQGL A +N A + +LD R SY+ V++DDL + G EPYR Sbjct: 370 AGQINGTSGYEEAAAQGLWAALNIACREKELDPFVPGRDSSYMAVLVDDLVTSGTEEPYR 429 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL---V 482 MFTSRAE+R+ LR DNAD RLTP+G ++G +GE + + F ++ + +R LL+ + + Sbjct: 430 MFTSRAEHRLLLREDNADVRLTPLGRRIGLVGEEQWRLFNDKMEHGHAVRRLLQQVRVQL 489 Query: 483 LTSKNLSSTSISFKQDGKTRTAY------EFLSYPDFSIQNLFSI-CPDARKFSS---LV 532 + + T+ + ++ + R A E L PD ++ L I P A + Sbjct: 490 TDGDDATQTAPATPEETELRAALRGRTLEEALRRPDMDLERLARISAPLAEALADRDLRD 549 Query: 533 IERLQIESSYAAYTGRQM-IEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 +E +Q++ YA Y RQ + A+ + E L P D DY + LS E++EKL ++P N Sbjct: 550 LETVQVDVKYAGYLERQRELIARAARLESVEL-PADLDYRQVAGLSREVEEKLDRVRPRN 608 Query: 592 LLQASKIEGMTPAALNLLLIYIKK 615 L QA +I G+TPAA+ L I++ K Sbjct: 609 LGQAGRISGVTPAAVGCLEIHLHK 632 >gi|255068632|ref|ZP_05320487.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria sicca ATCC 29256] gi|255047130|gb|EET42594.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria sicca ATCC 29256] Length = 636 Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust. Identities = 287/618 (46%), Positives = 392/618 (63%), Gaps = 6/618 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 8 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 67 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY+ A++ + +QENL++ Q Sbjct: 68 ALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKAAIREMLENQENLELFQQS 127 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + + IS ++ + VVLT GTFL G IHIG GR GD + SL Sbjct: 128 VDDVTLDGDRISGVITAMGVEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 187 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + + GRLKTGTP R+DG+TI + + +Q D + FS + + RQ+ C I Sbjct: 188 GRLRELNLPQGRLKTGTPPRIDGRTIDFSRLTEQPGDTPVPVFSVRGNADMHPRQVSCWI 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TNL+TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEGL T Sbjct: 248 THTNLKTHEIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEGLTT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + YPNGIST+LP +IQ Q +R++ GLE +I+RPGYAIEYDY +P+ L +LETK I G Sbjct: 308 NEYYPNGISTSLPFDIQIQLVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKTIQG 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AG N+ + D + R +Y+GV++DDL +KGV E Sbjct: 368 LFFAGQINGTTGYEEAAAQGLLAGANALQYIRGQDPLLLRREQAYLGVLVDDLITKGVNE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT G K+G + E + + F + + LK+ Sbjct: 428 PYRMFTSRAEYRLQLREDNADMRLTEDGHKIGLVSEEQWRMFNEKREAIEREIQRLKTTW 487 Query: 483 LTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI--CPDARKFSSLVIERLQ 537 T + L+ + ++ + ++ L P+ L ++ + S+ VIE+++ Sbjct: 488 YTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGARSSENLSAEVIEQVE 547 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ Y Y RQ E + E +P D DY+ + LS E+++KL+ KP + QAS+ Sbjct: 548 IQVKYQGYIDRQNEEIDSRRDIETLKLPDDIDYAKVKGLSAEVQQKLNQHKPETVGQASR 607 Query: 598 IEGMTPAALNLLLIYIKK 615 I G+TPAA+ LL++++K+ Sbjct: 608 ISGVTPAAVALLMVHLKR 625 >gi|255945871|ref|XP_002563703.1| Pc20g12180 [Penicillium chrysogenum Wisconsin 54-1255] gi|211588438|emb|CAP86547.1| Pc20g12180 [Penicillium chrysogenum Wisconsin 54-1255] Length = 688 Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust. Identities = 283/635 (44%), Positives = 389/635 (61%), Gaps = 23/635 (3%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R YDV+VIGGGHAG EA A AA+ GA TAL+T IG SCNP+ GG+GKG ++RE+D Sbjct: 35 RPYDVVVIGGGHAGSEACAAAARSGARTALVTPSLENIGVCSCNPSFGGIGKGTMIREVD 94 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 A+DG+ GR+ D AG+ FRVLN KGPAV GPR Q DR+LY+ M E+ ENL++++G+ Sbjct: 95 AMDGVAGRIIDKAGVMFRVLNRSKGPAVWGPRAQIDRDLYKRYMSEELAGTENLNIVEGK 154 Query: 124 VAG--FNTE--------KNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGR 173 VA +TE + I + ++ +I VV+TTGTFL G IHIG P+GR Sbjct: 155 VADIVLSTEGIENTPGAQGKIVGVRLESGEVISTGRVVITTGTFLGGEIHIGMDVFPSGR 214 Query: 174 MGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI 233 MG++P+ L S + F GRLKTGTP RLD KTI + E Q D PFS++ + Sbjct: 215 MGEAPTYGLSKSLREAGFQLGRLKTGTPPRLDKKTIDFSALEVQKGDSPPHPFSYLNKTV 274 Query: 234 T---NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNG 290 Q+ C +T TN H II N+ S ++ GPRYCPS+E KI+RF ++ Sbjct: 275 DVGDEGQLTCWMTHTNEAAHEIIRANLDKSIHIRETVR--GPRYCPSLESKIIRFKDKTQ 332 Query: 291 HQIFLEPEGLN-TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPK 349 HQI+LEPEG DV+YPNGIS +P + Q+ +R + GLE V +++PGY +EYDYI+P+ Sbjct: 333 HQIWLEPEGFAPNDVIYPNGISMTVPADAQYAMLRVVRGLENVTMLQPGYGVEYDYIDPR 392 Query: 350 ELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIG 409 L PTLETK ISGL+LAGQINGTTGYEEAA QG+VAG N+ +S + +R+D +IG Sbjct: 393 NLRPTLETKLISGLYLAGQINGTTGYEEAAGQGIVAGTNAGLESQNRSPLTLTRSDGFIG 452 Query: 410 VMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQ 469 +MIDDL +KGV EPYRMFT+R+EYRIS R DNAD RLT + G + ++R F+ Sbjct: 453 IMIDDLITKGVSEPYRMFTTRSEYRISTRSDNADLRLTRMARDAGVVSDKRWSHFSDTEA 512 Query: 470 EYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDAR--- 526 + L++LL + L+S S + D R+A + L I L Sbjct: 513 QIQELQTLLGNTKLSSSAWSRKGFKVRSDTSIRSALDILCLDGTDINTLIPTIESPTGTA 572 Query: 527 ----KFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKE 582 F+ ++ R+ IE YA Y RQ A+ + +E L+P D DYS + +SNE ++ Sbjct: 573 YTPASFAPEILTRVAIEGRYAPYLKRQEKMAERFQQDENLLLPADLDYSMVHGISNEERQ 632 Query: 583 KLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNT 617 L ++P ++ A +IEG+TP LL++++K + Sbjct: 633 VLQRVRPVSVGMAKRIEGVTPVGALRLLMHVRKGS 667 >gi|332800541|ref|YP_004462040.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Tepidanaerobacter sp. Re1] gi|332698276|gb|AEE92733.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Tepidanaerobacter sp. Re1] Length = 628 Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust. Identities = 273/612 (44%), Positives = 378/612 (61%), Gaps = 3/612 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV V+G GHAGCEAA A++G T +I M+CNP+IGG GKG++VREIDAL Sbjct: 8 YDVAVVGIGHAGCEAALATARMGLKTVAFAINLDSIALMACNPSIGGPGKGNMVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D IQ R+LN KKGPAVR R Q D+ Y AM+ + SQENLD++Q EV Sbjct: 68 GGQMAINVDKTFIQVRMLNTKKGPAVRALRAQLDKRAYCAAMKYTVESQENLDIVQEEVV 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + +V + + V+LTTG +LRG I IG L +G G P+N L S Sbjct: 128 KILVEGEKVKGVVTKTGGVYEARAVILTTGVYLRGRIVIGDLSYSSGPSGLFPANELSKS 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + GR KTGTP R+ ++ + K Q D+ + PFS+ ++KI Q+ C +T T Sbjct: 188 LESLGLELGRFKTGTPPRIHKDSVDFSKMIIQPGDDVITPFSYTSEKIQREQVPCWLTYT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N TH+II EN+ + +Y+G+IK GPRYCPS+E KIV F ++ HQIF+EPEG T + Sbjct: 248 NETTHKIIAENLHRAPLYTGEIKGVGPRYCPSVEMKIVNFKDKKSHQIFIEPEGNGTREM 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+ST+LP ++Q ++ GLE I+R GYAIEYD++ P +L PTLETK + GL++ Sbjct: 308 YVQGLSTSLPADVQIAMTHSVKGLENAKIMRFGYAIEYDFVVPTQLKPTLETKAVQGLYM 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGT+GYEEAAAQGL+AGIN+A K + + + SR+D+YIGV+IDDL +KGV EPYR Sbjct: 368 AGQINGTSGYEEAAAQGLIAGINAALKIKEKEPLVLSRSDAYIGVLIDDLVTKGVTEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 + TSRAEYR+ LR DNAD RL IG +G I + R ++F K + + LKS+ +T Sbjct: 428 ILTSRAEYRLLLRQDNADLRLMDIGHSIGLISDDRYEKFLKKKRLIDDEIKRLKSIKITP 487 Query: 486 K---NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSY 542 N T ++ + T E L P+ + L + D + VIE+++I ++Y Sbjct: 488 TAKVNEVLTGLNTAKLNSPSTLAELLKRPELDYEKLKVLDEDREQLPDDVIEQVEIATAY 547 Query: 543 AAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMT 602 Y RQM + + K E + IP D DY + L E +EKL +KP ++ QAS+I G+ Sbjct: 548 EGYIERQMSQVAQFKKMENKKIPDDIDYDEIYGLGFEAREKLKEVKPISIGQASRISGVN 607 Query: 603 PAALNLLLIYIK 614 P+ + +LLIY++ Sbjct: 608 PSDVTVLLIYLE 619 >gi|161870869|ref|YP_001600043.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria meningitidis 053442] gi|161596422|gb|ABX74082.1| glucose inhibited division protein A [Neisseria meningitidis 053442] Length = 642 Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust. Identities = 288/621 (46%), Positives = 390/621 (62%), Gaps = 12/621 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 19 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 78 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY+ A++ + +QENLD+ Q Sbjct: 79 ALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKAAIREMLENQENLDLFQQA 138 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + + IS ++ + VVLT GTFL G IHIG GR GD + SL Sbjct: 139 VEDVTLDGDRISGVITAMGVEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 198 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT----DKITNRQIE 239 + GRLKTGTP R+DG+TI + + +Q D P M+ ++ RQ+ Sbjct: 199 GRLRELKLPQGRLKTGTPPRIDGRTIDFSQLTEQPGD---TPVPVMSVRGNAEMHPRQVS 255 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEG Sbjct: 256 CWITHTNTQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEG 315 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 316 LTTHEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKT 375 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG N+ + + D + R +Y+GV++DDL +KG Sbjct: 376 IQGLFFAGQINGTTGYEEAAAQGLLAGANAVQYVREQDPLLLRREQAYLGVLVDDLITKG 435 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 V EPYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + + LK Sbjct: 436 VNEPYRMFTSRAEYRLQLREDNADMRLTEDGYKIGLVGEEQWRMFNEKREAIEREIQRLK 495 Query: 480 SLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI--CPDARKFSSLVIE 534 + T + L+ + ++ + ++ L P+ L ++ + S+ VIE Sbjct: 496 TTWYTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGAMPSENLSAEVIE 555 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E + E +P D DYS + LS E+++KL+ KP + Q Sbjct: 556 QVEIQVKYQGYIDRQNEEIDSRRDIETLKLPDDIDYSKVKGLSAEVQQKLNQHKPETVGQ 615 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G+TPAA+ LL++++K+ Sbjct: 616 ASRISGVTPAAVALLMVHLKR 636 >gi|332531223|ref|ZP_08407136.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Hylemonella gracilis ATCC 19624] gi|332039330|gb|EGI75743.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Hylemonella gracilis ATCC 19624] Length = 679 Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust. Identities = 301/666 (45%), Positives = 393/666 (59%), Gaps = 54/666 (8%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIV+GGGHAG EAA AA++G T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FEVIVVGGGHAGTEAALAAARMGCKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D AGIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q V Sbjct: 67 GGAMAIATDEAGIQFRILNASKGPAVRATRAQADRILYKAAIRRRLENQPNLMLFQQAVD 126 Query: 126 GFNTEKN----IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 E + + V Q R TVVLT GTFL G IHIG AGR GD P+ S Sbjct: 127 DLLVEGDGDGARVVGAVTQAGIAFRGRTVVLTAGTFLDGKIHIGLDNYAAGRAGDPPAVS 186 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDK-TEK----------QFADERLIP-FSFM 229 L + GRLKTGTP RLDG+TI + + TE+ Q A+E IP FSFM Sbjct: 187 LSARLKELQLPQGRLKTGTPPRLDGRTIDFSQCTEQPGDGMPGAASQGANEGEIPVFSFM 246 Query: 230 T-DKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGER 288 ++ RQ+ C IT TN TH II S +++G I+ GPRYCPS+EDKI RF + Sbjct: 247 GLREMHPRQMPCWITHTNERTHEIIRSGFDRSPMFTGKIEGVGPRYCPSVEDKINRFAGK 306 Query: 289 NGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINP 348 + HQIFLEPEGL T+ YPNGIST+LP +IQ +R++ GLE I+RPGYAIEYDY +P Sbjct: 307 DSHQIFLEPEGLTTNEYYPNGISTSLPFDIQLALVRSMRGLENAQILRPGYAIEYDYFDP 366 Query: 349 KELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYI 408 + L + ET++I GLF AGQINGTTGYEEAAAQGL AGIN+A + R +Y+ Sbjct: 367 RSLKSSFETRQIQGLFFAGQINGTTGYEEAAAQGLFAGINAALQCRGEAAWLPGRDQAYL 426 Query: 409 GVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYI 468 GV++DDL +KGV EPYRMFTSRAE+R+ LR DNAD RLT IG +LG + + R + F + Sbjct: 427 GVLVDDLITKGVTEPYRMFTSRAEFRLQLREDNADMRLTEIGRRLGLVDDARWEAFNRKR 486 Query: 469 QEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSICPDA 525 + LKS + + L + Y + L P L S+ D Sbjct: 487 DAVSRETERLKSTWVNPRILPAAEAERVLGVGIEHEYHLFDLLRRPGVKYAELMSM--DG 544 Query: 526 RKFSS--------------------------------LVIERLQIESSYAAYTGRQMIEA 553 K++S V+++++I + YA Y RQ E Sbjct: 545 GKYASPASAARNELPVAGAAAVTLTGVSRETLGDLYEPVVDQIEIAAKYAGYIDRQRDEV 604 Query: 554 KEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYI 613 + E+ +P D DY S+ ALS E ++KL +P L QAS+I G+TPA ++LLLI++ Sbjct: 605 ERAAHYEQLQLPADLDYMSVSALSIEARQKLQKHRPETLGQASRISGITPATISLLLIHL 664 Query: 614 KKNTVK 619 +K+ K Sbjct: 665 RKSGFK 670 >gi|297519012|ref|ZP_06937398.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli OP50] Length = 583 Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust. Identities = 269/576 (46%), Positives = 368/576 (63%), Gaps = 5/576 (0%) Query: 46 CNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRL 105 CNPAIGG+GKGHLV+E+DAL GLM + D AGIQFR+LN KGPAVR R QADR LYR Sbjct: 1 CNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQ 60 Query: 106 AMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIG 165 A++ + +Q NL + Q V E + + V Q R VVLT GTFL G IHIG Sbjct: 61 AVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIG 120 Query: 166 KLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP 225 GR GD PS L + GRLKTGTP R+D +TI + +Q D + Sbjct: 121 LDNYSGGRAGDPPSIPLSRRLRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPV 180 Query: 226 FSFMTDKITN-RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVR 284 FSFM + + +Q+ C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++R Sbjct: 181 FSFMGNASQHPQQVPCYITHTNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMR 240 Query: 285 FGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYD 344 F +RN HQIFLEPEGL ++ +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD Sbjct: 241 FADRNQHQIFLEPEGLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYD 300 Query: 345 YINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 + +P++L PTLE+K I GLF AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ Sbjct: 301 FFDPRDLKPTLESKFIQGLFFAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARS 360 Query: 405 DSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF 464 +Y+GV++DDL + G EPYRMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF Sbjct: 361 QAYLGVLVDDLCTLGTKEPYRMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARF 420 Query: 465 AKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSI 521 + ++ R LKS +T ++ ++ + + + L P+ + + L ++ Sbjct: 421 NEKLENIERERQRLKSTWVTPSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTL 480 Query: 522 CPDARKFSS-LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNEL 580 P A + E+++I+ Y Y RQ E ++ E L+P DY + LSNE+ Sbjct: 481 TPFAPALTDEQAAEQVEIQVKYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEV 540 Query: 581 KEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKN 616 KL+ KP ++ QAS+I G+TPAA+++LL+++KK Sbjct: 541 IAKLNDHKPASIGQASRISGVTPAAISILLVWLKKQ 576 >gi|312128798|ref|YP_003993672.1| glucose inhibited division protein a [Caldicellulosiruptor hydrothermalis 108] gi|311778817|gb|ADQ08303.1| glucose inhibited division protein A [Caldicellulosiruptor hydrothermalis 108] Length = 628 Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust. Identities = 278/616 (45%), Positives = 387/616 (62%), Gaps = 10/616 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV V+G GHAG EAA +A+LG T + +IG+M CNP+IGG GKGHLVREIDAL Sbjct: 8 YDVAVVGAGHAGIEAALASARLGLKTIIFAINLDSIGNMPCNPSIGGTGKGHLVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ ADA IQ R+LN KGPAV R Q DR YRL M++ + SQENLD+ Q EV Sbjct: 68 GGEMGKAADATAIQVRILNRAKGPAVYSLRAQCDRSRYRLYMKKVLESQENLDIRQAEVC 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + ++ VVL TGTFL G + IG+ +G G P+ L + Sbjct: 128 EVLVEDGRVKGVKITTGAIFLAKAVVLATGTFLGGKVIIGETVFDSGPDGMHPARYLTEN 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNRQIECGITR 244 K + R KTGTPAR+ +++ + K + Q DE+ +PFSF D Q+ C +T Sbjct: 188 LKKLGIEMMRFKTGTPARVHRRSLDFSKMQIQPGDEKPLPFSFENEDNFNIEQVPCYLTY 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETHRII EN+ + +++G I GPRYCPSIEDK+VRF ++ HQ+F+EP GL+TD Sbjct: 248 TTEETHRIIRENLHRAPLFTGLISGVGPRYCPSIEDKVVRFADKPRHQVFIEPTGLDTDE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+ST+LPE++Q + R++ GLE V I+RP YAIEYD INP +L PTL+ KKI GLF Sbjct: 308 MYVQGMSTSLPEDVQVKMYRSVIGLENVKIMRPAYAIEYDCINPLQLEPTLQFKKIKGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAAAQG++AGIN+A + + R+ +YIGV+IDDL +KG EPY Sbjct: 368 SAGQINGTSGYEEAAAQGIIAGINAAMYVKGKEMLILDRSQAYIGVLIDDLVTKGTNEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLR---SLLKSL 481 R+ TSRAEYR+ LR DNAD RLT IG K+G I Q+R+ K++Q+ + + +K+ Sbjct: 428 RIMTSRAEYRLILRQDNADLRLTEIGYKIGLIS---QQRYEKFLQKKKMIEDEINRVKNT 484 Query: 482 VLTSKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 V+ + + K T + L P+ S ++L I P V + ++I Sbjct: 485 VIAPSEKVNKLLQEKGSSPISTGVKLSDLLKRPELSYEDLKEIDPARPDLPWYVQDEVEI 544 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E Y Y +Q+ ++ K E + IP+ DYS + LS E K+KLS ++P ++ QAS+I Sbjct: 545 EIKYEGYIKKQLERIEQFKKLENKKIPEWVDYSKIIGLSTEAKQKLSQIRPASIGQASRI 604 Query: 599 EGMTPAALNLLLIYIK 614 G++PA +++LLI+++ Sbjct: 605 SGVSPADISVLLIWLE 620 >gi|41058562|gb|AAR99263.1| glucose-inhibited division protein A [Candidatus Blochmannia ocreatus] Length = 624 Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust. Identities = 286/614 (46%), Positives = 389/614 (63%), Gaps = 9/614 (1%) Query: 11 IGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMG 70 IGGGHAG EAA +A++ +T LITH +G MSCNPAIGG+GKGHLV+EIDA+ G+M Sbjct: 1 IGGGHAGTEAALASARMKCNTLLITHNIDMLGQMSCNPAIGGIGKGHLVKEIDAMGGVMA 60 Query: 71 RVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTE 130 D +GIQFR+LN KG AVR R QAD+ LYR ++ + QE L +IQG V Sbjct: 61 YAIDRSGIQFRILNNTKGAAVRATRAQADKILYRQIIRNILEYQEFLHIIQGSVEDLIIV 120 Query: 131 KN-IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMK- 188 N II + + +VVLTTGTFL G IHIG GR GD+ S++L + +K Sbjct: 121 DNKIIGVVAPRIGVKFYARSVVLTTGTFLNGKIHIGMKSFSGGRSGDTESSTLLSDRLKN 180 Query: 189 FDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITRTNL 247 F GRLKTGT R+ + I +D Q++D+ + FSF+ + + Q+ C IT TN Sbjct: 181 LSFRIGRLKTGTSPRIHSRNINFDILNIQYSDDPVPVFSFIGSETQHPAQVPCYITHTNH 240 Query: 248 ETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYP 307 ETH I+ N+ S IY+G ++ PRYCPSIEDKI+RF +RN HQ+FLEPEGL+T VY Sbjct: 241 ETHEIVKSNLHQSPIYTGLVQGKSPRYCPSIEDKIIRFSDRNSHQVFLEPEGLSTPEVYL 300 Query: 308 NGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAG 367 NGIST+LP ++Q + I++I GLE NI RPGYAIEYD+ +P++L TLE+K I GLF +G Sbjct: 301 NGISTSLPFDVQKKIIKSIKGLENANITRPGYAIEYDFFDPRDLKLTLESKLIVGLFFSG 360 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 QINGTTGYEEAAAQGL+AGIN+AR + + R +Y+GV++DDL + G EPYRMF Sbjct: 361 QINGTTGYEEAAAQGLLAGINAARFAKNKEGWYPRRDQAYLGVLVDDLCTHGTEEPYRMF 420 Query: 428 TSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKN 487 T+RAEYR+SLR DNAD RLT I LG I + K+F + R L+ + + + Sbjct: 421 TARAEYRLSLREDNADLRLTEIARNLGLINDIWWKKFCMKKESIEKERQRLRGIYIFPCS 480 Query: 488 LSSTSI-SFKQDGKTR--TAYEFLSYPDFS---IQNLFSICPDARKFSSLVIERLQIESS 541 T + +F + TR E L P+ + L + P V+E+++I+ Sbjct: 481 PEITKLNNFLKSPLTREINGEELLRRPEIDYIKLSRLNTFFPSILTIDKKVLEQIEIQIK 540 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y RQ E + F E L+P D D++S+ LS E+ EKL+ +P+++ QAS+I G+ Sbjct: 541 YEGYIHRQTEEIAKHIFNESVLLPADIDFNSIFGLSKEVVEKLNNCRPYSVGQASRISGV 600 Query: 602 TPAALNLLLIYIKK 615 TPAA++ LL+++KK Sbjct: 601 TPAAISNLLVWLKK 614 >gi|195123765|ref|XP_002006373.1| GI21007 [Drosophila mojavensis] gi|193911441|gb|EDW10308.1| GI21007 [Drosophila mojavensis] Length = 663 Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust. Identities = 284/633 (44%), Positives = 417/633 (65%), Gaps = 28/633 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+VIGGGHAG EA A AA++GA T L+THK TIG MSCNP+ GG+GKGHL+REIDAL Sbjct: 27 YDVVVIGGGHAGTEACAAAARMGARTLLLTHKLDTIGEMSCNPSFGGIGKGHLMREIDAL 86 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DG+ R D +G+ ++VLN ++GPAV GPR Q DR+LY+ A+Q+E+ S NL + V Sbjct: 87 DGVCARCCDRSGVHYKVLNKRRGPAVWGPRAQIDRQLYKRAVQQELFSMPNLQIRAASVD 146 Query: 126 GFNTEKNIISS-------IVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSP 178 + + +S +++++ ++R +VVLTTGTFLR I+IG PAGR+GD P Sbjct: 147 NLQIDADESTSNGTRCNGVLLENGELVRSHSVVLTTGTFLRAHINIGLEVRPAGRIGDQP 206 Query: 179 SNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI---TN 235 + +L + + F GRLKTGTP R+ ++ + + E+ AD+ +PFSFM + Sbjct: 207 AKALGEALNRLGFRMGRLKTGTPPRIAKSSVDFSQLERHEADDPPMPFSFMNRDVWLPAK 266 Query: 236 RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFL 295 Q+ C +T T + I+ +N+ + + +I GPRYCPSIE K++RFG R HQ++L Sbjct: 267 EQMHCYLTYTTPRVNEIVRDNLHVNRHVTEEIT--GPRYCPSIESKVLRFGARV-HQVWL 323 Query: 296 EPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTL 355 EPEG ++ ++YP GIS LP Q + +R I GLEK +++PGY +EYD+I+P+EL+PTL Sbjct: 324 EPEGFDSPLIYPQGISCTLPHPQQIELVRAIKGLEKAEVVQPGYGVEYDFIDPRELYPTL 383 Query: 356 ETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDC--ICFSRTDSYIGVMID 413 ETK+++GLF AGQ+NGTTGYEEAAAQG++AG N+A ++ D + SRT+ YIGV+ID Sbjct: 384 ETKRVTGLFFAGQLNGTTGYEEAAAQGIIAGANAAGRTVHQDGRQLNISRTEGYIGVLID 443 Query: 414 DLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNF 473 DLTS G EPYRMFTSRAE+R+SLRPDNAD RLT G + G + E+R + F + E+ Sbjct: 444 DLTSLGTNEPYRMFTSRAEFRLSLRPDNADMRLTRKGHEFGLVSEQRYEHFQQ--TEHRL 501 Query: 474 LRSL--LKSLVLTSKNLSSTSISFKQDGKT--RTAYEFLSYP--DFSIQNLFSICPDARK 527 R + L+SL S N ++ Q + ++A++ LS P + S++ L +CP Sbjct: 502 KRGIEALRSLQKHS-NYWRQALGLPQSKASIQKSAFDMLSVPAENISVKQLIELCPTELG 560 Query: 528 F---SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDY-SSLPALSNELKEK 583 + + RL+IE+ Y+ + Q + ++++ EE+ IP D DY S +LSNE ++K Sbjct: 561 WLRADDELATRLKIEALYSFFVDEQQRDVEDVRREERLCIPSDIDYFSKSLSLSNEERQK 620 Query: 584 LSILKPFNLLQASKIEGMTPAALNLLLIYIKKN 616 L++++P + AS+I+G+TP+ + LL Y+KK+ Sbjct: 621 LTLIQPQTIAAASRIQGVTPSTILRLLKYVKKS 653 >gi|153803600|ref|ZP_01958186.1| glucose inhibited division protein A [Vibrio cholerae MZO-3] gi|124120865|gb|EAY39608.1| glucose inhibited division protein A [Vibrio cholerae MZO-3] Length = 631 Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust. Identities = 283/626 (45%), Positives = 384/626 (61%), Gaps = 15/626 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA AA+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHETFDVIVVGGGHAGTEAALAAARTGQRTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRNVLENTPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + I +V Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQAVDDVIVEHDHIRGVVTQMGLKFHAKAVVLTVGTFLGGKIHIGLENYAGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D ++ + E Q D FSFM + + RQI Sbjct: 182 ALAHRLRELPFRVDRLKTGTPPRIDANSVDFSVLEAQHGDNPTPVFSFMGKREHHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +++ HQIF+EPEG Sbjct: 242 CYITHTNERTHDVIRANLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADKDSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTTELYPNGISTSLPFDVQMQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKY 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 IHGLFFAGQINGTTGYEEAAAQGLMAGLNASLYSQDKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG + + R RF + I R L+ Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLVDDARWVRFNQKIDNMAKERQRLQ 481 Query: 480 SLVLTSKN--------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL 531 + + L T +S + G+ + L P+ + L ++ A Sbjct: 482 ETWMNPNSVGVEQLNTLLKTPMSREASGE-----DLLRRPEMTYDLLTTLPAFAPALEDA 536 Query: 532 -VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 E+++I+ Y Y RQ E ++ E +P + DY + LSNE+ KL+ KP Sbjct: 537 EAAEQVEIQVKYDGYIQRQQDEIEKSLRHEHTKLPAELDYKQVKGLSNEVVLKLNAAKPE 596 Query: 591 NLLQASKIEGMTPAALNLLLIYIKKN 616 + AS+I G+TPAA+++LL+++KK+ Sbjct: 597 TIGIASRISGITPAAISILLVHLKKH 622 >gi|218885655|ref|YP_002434976.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756609|gb|ACL07508.1| glucose inhibited division protein A [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 633 Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust. Identities = 274/613 (44%), Positives = 371/613 (60%), Gaps = 3/613 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D IV+G GHAGCEAA +A+LG T L+T IG +SCNPAIGGL KGH+V+EIDAL Sbjct: 11 FDCIVVGAGHAGCEAAMASARLGHPTLLLTSNADRIGHLSCNPAIGGLAKGHMVKEIDAL 70 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+MG AD AGIQFR LNV KGPAVR R Q DR+ Y A++R++ +Q+NL V Q Sbjct: 71 GGMMGLWADEAGIQFRTLNVSKGPAVRATRAQIDRDAYLHAVRRDVFAQDNLWVWQDTAE 130 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E+ + + R TV+LTTGTFL G+IH+G P GR+GD+P+ L S Sbjct: 131 AILAEQGRAAGVRTGLGQEFRARTVLLTTGTFLCGLIHVGLTNFPGGRLGDAPAVGLSAS 190 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + GRLKTGT RL +I + E+Q DE PFSF + Q+ C +T T Sbjct: 191 LRTHGLELGRLKTGTTPRLLRASIDFSVMEEQPGDEPPRPFSFRGPGVRLPQVPCYMTWT 250 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N TH I S +++G I G RYCPSIEDK+ RF +R HQIF+EPEGL + Sbjct: 251 NERTHAAIRAGFDRSPMFTGVITGTGARYCPSIEDKVARFPDRERHQIFVEPEGLTSPEC 310 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YPNGI T+LP ++Q I TIPGLE I+RPGYAIEYDY +P +L PTLETK + GL+L Sbjct: 311 YPNGIPTSLPLDVQKAMIATIPGLENAQIVRPGYAIEYDYADPIQLHPTLETKTLPGLYL 370 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGT+GYEEAAAQGL A +N++ L R +Y+ V++DDL +KG EPYR Sbjct: 371 AGQINGTSGYEEAAAQGLWAALNASCALRGLPPFLPGRDAAYMAVLVDDLVTKGTREPYR 430 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF-AKYIQEYNFLRSLLKSLVLT 484 MFTSRAE+R+ LR +NAD RLTP+G LG + + F A++ + + L + V Sbjct: 431 MFTSRAEHRLLLRENNADARLTPLGRDLGLVDDGHWAVFRARHDALADLMTELEQRRVTP 490 Query: 485 SKNLSSTSISFKQDGKTRTA--YEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSY 542 + + TR E L P S++ L + P+A + V E + Y Sbjct: 491 DAATRAVFADLGEAVPTRAVSLAELLRRPTMSLERLRAFWPEATDHAPEVREEAETIIRY 550 Query: 543 AAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMT 602 + Y RQ + +E + +P+ DY+++ L+ E+ EKL+ ++P + QA++I G+T Sbjct: 551 SGYLARQEELVERAARQESQPLPEGLDYTAVAGLTREIVEKLTRVQPRTMGQAARISGVT 610 Query: 603 PAALNLLLIYIKK 615 PAAL + I+++K Sbjct: 611 PAALTCIEIHLRK 623 >gi|327485243|gb|AEA79650.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae LMA3894-4] Length = 631 Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust. Identities = 283/626 (45%), Positives = 385/626 (61%), Gaps = 15/626 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA AA+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHETFDVIVVGGGHAGTEAALAAARTGQRTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRNVLENTPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + I +V Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQAVDDVIVEHDHIRGVVTQMGLKFHAKAVVLTVGTFLGGKIHIGLENYAGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D ++ + E Q D FSFM + + RQI Sbjct: 182 ALAHRLRELPFRVDRLKTGTPPRIDANSVDFSVLEAQHGDNPTPVFSFMGKREHHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +++ HQIF+EPEG Sbjct: 242 CYITHTNERTHDVIRANLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADKDSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTTELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 IHGLFFAGQINGTTGYEEAAAQGLMAGLNASLYSQDKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG + + R RF + I R L+ Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLVDDARWVRFNQKIDNMAKERQRLQ 481 Query: 480 SLVLTSKN--------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL 531 + + L T +S + G+ + L P+ + + L ++ A Sbjct: 482 ETWMNPNSVGVEQLNTLLKTPMSREASGE-----DLLRRPEMTYELLTTLPAFAPALEDA 536 Query: 532 -VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 E+++I+ Y Y RQ E ++ E +P + DY + LSNE+ KL+ KP Sbjct: 537 EAAEQVEIQVKYDGYIQRQQDEIEKSLRHEHTKLPAELDYKQVKGLSNEVVLKLNAAKPE 596 Query: 591 NLLQASKIEGMTPAALNLLLIYIKKN 616 + AS+I G+TPAA+++LL+++KK+ Sbjct: 597 TIGIASRISGITPAAISILLVHLKKH 622 >gi|205831541|sp|A9M3R4|MNMG_NEIM0 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A Length = 628 Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust. Identities = 288/621 (46%), Positives = 390/621 (62%), Gaps = 12/621 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 5 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY+ A++ + +QENLD+ Q Sbjct: 65 ALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKAAIREMLENQENLDLFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + + IS ++ + VVLT GTFL G IHIG GR GD + SL Sbjct: 125 VEDVTLDGDRISGVITAMGVEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT----DKITNRQIE 239 + GRLKTGTP R+DG+TI + + +Q D P M+ ++ RQ+ Sbjct: 185 GRLRELKLPQGRLKTGTPPRIDGRTIDFSQLTEQPGD---TPVPVMSVRGNAEMHPRQVS 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEG Sbjct: 242 CWITHTNTQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 302 LTTHEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKT 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG N+ + + D + R +Y+GV++DDL +KG Sbjct: 362 IQGLFFAGQINGTTGYEEAAAQGLLAGANAVQYVREQDPLLLRREQAYLGVLVDDLITKG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 V EPYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + + LK Sbjct: 422 VNEPYRMFTSRAEYRLQLREDNADMRLTEDGYKIGLVGEEQWRMFNEKREAIEREIQRLK 481 Query: 480 SLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI--CPDARKFSSLVIE 534 + T + L+ + ++ + ++ L P+ L ++ + S+ VIE Sbjct: 482 TTWYTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGAMPSENLSAEVIE 541 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E + E +P D DYS + LS E+++KL+ KP + Q Sbjct: 542 QVEIQVKYQGYIDRQNEEIDSRRDIETLKLPDDIDYSKVKGLSAEVQQKLNQHKPETVGQ 601 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G+TPAA+ LL++++K+ Sbjct: 602 ASRISGVTPAAVALLMVHLKR 622 >gi|320103472|ref|YP_004179063.1| glucose inhibited division protein A [Isosphaera pallida ATCC 43644] gi|319750754|gb|ADV62514.1| glucose inhibited division protein A [Isosphaera pallida ATCC 43644] Length = 619 Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust. Identities = 276/613 (45%), Positives = 377/613 (61%), Gaps = 18/613 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DV+VIGGGHAG EAA AA++G TAL+T +G MSCNPAIGG+GKG + REIDAL Sbjct: 6 FDVVVIGGGHAGIEAALAAARMGCRTALLTLNVDAVGQMSCNPAIGGVGKGQIAREIDAL 65 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG + DA+ IQ+R+LN KGPA+ GPR Q D++LY++ + + QE L + Q + Sbjct: 66 GGAMGLITDASAIQYRLLNRGKGPAMHGPRAQCDKKLYQITAKETVERQERLTLRQESIE 125 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E+ + ++ + + VVLTTGTFL+ ++H G+LK GR GD + L +S Sbjct: 126 AVRVEQGKVVGVLCRGGVVYEARAVVLTTGTFLQALMHTGELKTAGGRAGDPAAQGLSSS 185 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + R KTGTP RL+G+TI + + E+Q D+ FS +T + Q+ C +T T Sbjct: 186 LRALGIELRRFKTGTPPRLNGRTINFRRLEEQPGDDDPTFFSSLTTALNGPQMVCHLTAT 245 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N + H +I N+ + +Y G I S GPRYCPSIEDK+VRFG+R+ HQIFLEPEG T Sbjct: 246 NEQVHDLIRANLHRAPMYCGQIDSRGPRYCPSIEDKVVRFGDRSSHQIFLEPEGRRTLEY 305 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NGIST+LP ++Q I IPGLE I+R GYA+EYDY P +L +LE K+ GLFL Sbjct: 306 YCNGISTSLPRDVQEAIIPLIPGLEHAEIMRFGYAVEYDYAPPTQLRASLEVKEWPGLFL 365 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAAAQGLVAGIN+A + R+ +YIGV+IDDL +KGV EPYR Sbjct: 366 AGQINGTTGYEEAAAQGLVAGINAALSVQNREPFILDRSQAYIGVLIDDLVTKGVDEPYR 425 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAE+R++LR DNAD RLT +G +LG + E R + F + ++ L L+ Sbjct: 426 MFTSRAEFRLALRYDNADLRLTELGRRLGLVDELRWRTFQERVERMERLGERLR------ 479 Query: 486 KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPD--ARKFSSLVIERLQIESSYA 543 +FK DG+ T L P + + L ++ P+ A + E Y Sbjct: 480 --------TFKVDGE--TLERRLRRPTTTWEELRALDPELPAEASDPSSVRHWLAELKYD 529 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y RQ + ++ + E + IP+D DY +L L +E +EK + +P QA +I G+ P Sbjct: 530 GYLVRQRDQVEKFRRWEDKPIPEDLDYDALTQLRHEAREKFAATRPVTFGQAGRISGVAP 589 Query: 604 AALNLLLIYIKKN 616 A L +LL+Y+KK Sbjct: 590 ADLAVLLVYLKKG 602 >gi|197245367|ref|NP_001127786.1| mitochondrial translation optimization 1 homolog [Nasonia vitripennis] Length = 662 Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust. Identities = 277/623 (44%), Positives = 399/623 (64%), Gaps = 14/623 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EA A AA++GA T L+THK STIG MSCNP+ GG+GKG+L+RE+DAL Sbjct: 38 FDVIVIGGGHAGTEACAAAARMGAKTLLVTHKKSTIGEMSCNPSFGGIGKGNLMREVDAL 97 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DG+ R+ D +G+ +++LN +KGPAV G R Q DR LY+ +Q E+ + L +I+ V Sbjct: 98 DGICCRICDISGVHYKILNKRKGPAVWGLRAQIDRTLYKKNLQAELFNYPCLQIIESSVE 157 Query: 126 GF--NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 + + ++++D + + +VV+TTGTFL+G IHIG PAGR+ D PS +L Sbjct: 158 DLLLHGDSPKCCGVILKDGTKVLSDSVVITTGTFLKGEIHIGLETRPAGRLNDEPSIALA 217 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI---TNRQIEC 240 ++ + F GRLKTGTP RL+ TI + K +Q DE PFSFM+D + +Q+ C Sbjct: 218 DTLDRLGFRIGRLKTGTPPRLEKSTIDFSKCIRQEPDEIPEPFSFMSDSVWLPPEKQLCC 277 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +T T +I+ +N+ + + D+K GPRYCPSIE K++RF + + HQ++LEPEGL Sbjct: 278 FLTHTGQGVLKIVKDNLHCNIHVTQDVK--GPRYCPSIESKVLRFPQLS-HQVWLEPEGL 334 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 ++ ++YP G+S LP + Q + I+ IPGLE +++PGY + YDY++P+EL LETKKI Sbjct: 335 DSSLIYPAGLSCTLPADQQEELIKHIPGLENAKMVKPGYGVAYDYVDPRELTSALETKKI 394 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLFLAGQINGTTGYEEAAAQG+VAG+N+A K + SRT+ YIGV+IDDLT+ G Sbjct: 395 PGLFLAGQINGTTGYEEAAAQGIVAGVNAAAKVFNKPPLIISRTEGYIGVLIDDLTTGGT 454 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAE+R+SLRPDNAD RLT G +GC+ E R ++ +Q + L + Sbjct: 455 TEPYRMFTSRAEFRVSLRPDNADERLTQKGYTVGCVSEERWRKTESLLQNVHECLEALNN 514 Query: 481 LVLTSKNLSSTSISFKQDGKT--RTAYEFLSYPDFSIQNLFSICPDARKF--SSLVIERL 536 T KN I + + + +TA+ L D ++ +L P+ + + +R+ Sbjct: 515 TSKTHKNWQK-CIRLRDNKQNLPKTAFALLQNEDVTLDDLAPHVPELLYLEKNPKLSQRV 573 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPA-LSNELKEKLSILKPFNLLQA 595 +IE++Y Q E +EI+ E IP + D++S +S E +EKL+ +P + A Sbjct: 574 KIEATYTHAVEEQKREVEEIRKNESMAIPSNIDWNSQSLNISVEDREKLADAQPQTIAAA 633 Query: 596 SKIEGMTPAALNLLLIYIKKNTV 618 I G+TPAA+ L ++K N + Sbjct: 634 YNIAGVTPAAVVKLYYHVKHNKI 656 >gi|219681946|ref|YP_002468330.1| glucose-inhibited division protein A [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|254811507|sp|B8D6S0|MNMG_BUCAT RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|219621679|gb|ACL29835.1| glucose-inhibited division protein A [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|311086329|gb|ADP66410.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311086903|gb|ADP66983.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] Length = 628 Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust. Identities = 288/622 (46%), Positives = 394/622 (63%), Gaps = 7/622 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R++DVIV+G GHAG EAA ++++G T L+T K S +G++SCNPAIGG+GK HLV+EID Sbjct: 5 RNFDVIVVGAGHAGTEAAMASSRMGCKTLLLTQKISDLGALSCNPAIGGIGKSHLVKEID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G+M + D +GIQFR+LN KGPAVR R QAD+ LY +++ + Q NL +++ E Sbjct: 65 ALGGMMAKAIDYSGIQFRILNSSKGPAVRSTRAQADKILYHETVKKILKKQNNLLILEAE 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + + ++ Q+ +VVL GTFL G IHIG AGR+GD + L Sbjct: 125 VKDLIFKNYSVVGVLTQNEINFYSRSVVLAAGTFLGGKIHIGLKSYSAGRIGDKSAIDLS 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGI 242 + RLKTGTP R+D T+ ++ Q +D + FSFM + + +QI C + Sbjct: 185 VRLRELSLRVNRLKTGTPPRIDINTVNFNNLLIQNSDTPVPVFSFMGNVSHHPKQIPCYL 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II +N+ S IY+G +K GPRYCPSIEDKIVRF +R HQ+FLEPEGL++ Sbjct: 245 THTNEKTHEIIRKNLDKSPIYTGFLKGLGPRYCPSIEDKIVRFPDRKSHQVFLEPEGLSS 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 VYPNGIST+LP E+Q Q + +I GLEK IIRPGYAIEYD+ +PK+L TLE+K I G Sbjct: 305 IKVYPNGISTSLPIEVQEQIVASIKGLEKSKIIRPGYAIEYDFFDPKDLNLTLESKLIKG 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAA+QGL+AG+N+A S + R +Y+GV+IDDLT++G E Sbjct: 365 LFFAGQINGTTGYEEAASQGLLAGLNAALSSKNTEGWFPRRDQAYLGVLIDDLTTQGTEE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYI----QEYNFLRSLL 478 PYRMFTSRAEYR+SLR DNAD RLT IG KLG + + R R+ + + E N L+ Sbjct: 425 PYRMFTSRAEYRLSLREDNADLRLTEIGRKLGLVNDSRWIRYNQKVLNIQTEMNRLKKNK 484 Query: 479 KSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VIERLQ 537 S + ++ + K + E L P Q+L S+ L I +++ Sbjct: 485 ISPISPDADILKKLYNINLI-KEISMSELLKRPQIRYQDLQSLESFRTGIVDLEAIGQIE 543 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 E YA Y RQ E + E + DY+ + LS+E+ +KL+ KP ++ QAS+ Sbjct: 544 NEIKYAGYIKRQSEEIERHLKNENTFLSSICDYNKIRGLSSEVVKKLNDYKPISIGQASR 603 Query: 598 IEGMTPAALNLLLIYIKKNTVK 619 I G+TPAA+++LLI++KK + K Sbjct: 604 ISGITPAAISILLIHLKKESYK 625 >gi|311087494|gb|ADP67573.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 628 Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust. Identities = 288/622 (46%), Positives = 394/622 (63%), Gaps = 7/622 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R++DVIV+G GHAG EAA ++++G T L+T K S +G++SCNPAIGG+GK HLV+EID Sbjct: 5 RNFDVIVVGAGHAGTEAAMASSRMGCKTLLLTQKISDLGALSCNPAIGGIGKSHLVKEID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G+M + D +GIQFR+LN KGPAVR R QAD+ LY +++ + Q NL +++ E Sbjct: 65 ALGGMMAKAIDYSGIQFRILNSSKGPAVRSTRAQADKILYHETVKKILKKQNNLLILEAE 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + + ++ Q+ +VVL GTFL G IHIG AGR+GD + L Sbjct: 125 VKDLIFKNYSVVGVLTQNEINFYSRSVVLAAGTFLGGKIHIGLKSYSAGRIGDKSAIDLS 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGI 242 + RLKTGTP R+D T+ ++ Q +D + FSFM + + +QI C + Sbjct: 185 VRLRELSLRVNRLKTGTPPRIDINTVNFNNLLIQNSDTPVPVFSFMGNVSHHPKQIPCYL 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II +N+ S IY+G +K GPRYCPSIEDKIVRF +R HQ+FLEPEGL++ Sbjct: 245 THTNEKTHEIIRKNLDKSPIYTGFLKGLGPRYCPSIEDKIVRFPDRKSHQVFLEPEGLSS 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 VYPNGIST+LP E+Q Q + +I GLEK IIRPGYAIEYD+ +PK+L TLE+K I G Sbjct: 305 IKVYPNGISTSLPIEVQEQIVASIKGLEKSKIIRPGYAIEYDFFDPKDLNLTLESKLIKG 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAA+QGL+AG+N+A S + R +Y+GV+IDDLT++G E Sbjct: 365 LFFAGQINGTTGYEEAASQGLLAGLNAALSSKNTEGWFPRRDQAYLGVLIDDLTTQGTEE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYI----QEYNFLRSLL 478 PYRMFTSRAEYR+SLR DNAD RLT IG KLG + + R R+ + + E N L+ Sbjct: 425 PYRMFTSRAEYRLSLREDNADLRLTEIGRKLGLVNDSRWIRYNQKVLNIQTEMNRLKKNK 484 Query: 479 KSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VIERLQ 537 S + ++ + K + E L P Q+L S+ L I +++ Sbjct: 485 ISPISPDADILKKLYNINLI-KEISMSELLKRPQIRYQDLQSLESFRTGIVDLEAIGQIE 543 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 E YA Y RQ E + E + DY+ + LS+E+ +KL+ KP ++ QAS+ Sbjct: 544 NEIKYAGYIKRQSEEIERHLKNENTFLSSICDYNKIRGLSSEVVKKLNNYKPISIGQASR 603 Query: 598 IEGMTPAALNLLLIYIKKNTVK 619 I G+TPAA+++LLI++KK + K Sbjct: 604 ISGVTPAAISILLIHLKKESYK 625 >gi|71891794|ref|YP_277523.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|123641256|sp|Q494F8|MNMG_BLOPB RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|71795900|gb|AAZ40651.1| glucose-inhibited division protein A [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 632 Score = 526 bits (1356), Expect = e-147, Method: Compositional matrix adjust. Identities = 298/621 (47%), Positives = 391/621 (62%), Gaps = 15/621 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++ +T LITH T+G MSCNPA+GG+GKGHLV+EIDA+ Sbjct: 7 FDVIVVGGGHAGTEAALASARMQCNTLLITHNIDTLGQMSCNPAVGGIGKGHLVKEIDAM 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D +GIQFRVLN KG AVR R QAD+ LYR A++ + Q+ L VIQ V Sbjct: 67 GGSMAYAIDQSGIQFRVLNSSKGAAVRATRAQADKILYRQAIRSILEYQKFLLVIQASVE 126 Query: 126 GFNTEKNIISSIVMQDNSM-IRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 N I ++ M ++VVLTTGTFL G IHIG GR GDS S+SL + Sbjct: 127 DLIVSGNKIVGVITPKLGMKFSGTSVVLTTGTFLNGKIHIGMNNFRGGRSGDSESSSLLS 186 Query: 185 SFMK-FDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQIECGI 242 +K F RLKTGT R+ K I + Q++D+ + FSF+ + K+ Q+ C I Sbjct: 187 ERLKELSFQISRLKTGTSPRVHTKGINFGSLRAQYSDDPIPVFSFIGSTKLHPTQVPCYI 246 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH I+ N+ S +Y+G IK PRYCPSIEDKI RF +RN HQIFLEPEGL T Sbjct: 247 THTNNKTHEIVRSNLYQSPMYTGLIKGIAPRYCPSIEDKITRFSDRNAHQIFLEPEGLTT 306 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 VY NGIST+LP +Q Q I++I GLE IIRPGYAIEYD+ +P++L TLE+K ISG Sbjct: 307 PEVYLNGISTSLPFCVQMQMIKSIQGLENACIIRPGYAIEYDFFDPRDLKLTLESKIISG 366 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF +GQINGTTGYEEAAAQGL+AGIN+AR S + R +Y+GV++DDL + G E Sbjct: 367 LFFSGQINGTTGYEEAAAQGLLAGINAARFSKNKEGWYPRRDQAYLGVLVDDLCTHGTEE 426 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK--- 479 PYRMFTSRAEYR+SLR DNAD RLT I +LG I E R K F + R L+ Sbjct: 427 PYRMFTSRAEYRLSLREDNADLRLTEIARQLGLIDESRWKAFCCKKENIEKERQRLRNTY 486 Query: 480 -----SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIE 534 S V N T ++ + +G+ ++Y S + FS R+ V E Sbjct: 487 IFPYSSDVAQLNNFLKTPLTHETNGEDLLRRPEINYKKLSQLSTFSPSILDRQ----VFE 542 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y Q E K + E L+P D D++ + LS E+ +KL+ KP+++ Q Sbjct: 543 QIEIQIKYEGYIRHQQEEIKRHIYNENTLLPTDIDFNIVSGLSQEVIDKLNNYKPYSIGQ 602 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G+TPAA++ LL+++KK Sbjct: 603 ASRISGITPAAISNLLVWLKK 623 >gi|302872909|ref|YP_003841545.1| glucose inhibited division protein A [Caldicellulosiruptor obsidiansis OB47] gi|302575768|gb|ADL43559.1| glucose inhibited division protein A [Caldicellulosiruptor obsidiansis OB47] Length = 627 Score = 526 bits (1356), Expect = e-147, Method: Compositional matrix adjust. Identities = 281/616 (45%), Positives = 384/616 (62%), Gaps = 10/616 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV V+G GHAG EAA +A+LG T + +IG+M CNP+IGG GKGHLVREIDAL Sbjct: 8 YDVAVVGAGHAGIEAALASARLGLKTIIFAINLDSIGNMPCNPSIGGTGKGHLVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ ADA IQ R+LN KGPAV R Q DR YRL M+R + SQENLDV QGEV Sbjct: 68 GGEMGKAADATAIQVRILNRAKGPAVYSLRAQCDRSRYRLYMKRVLESQENLDVRQGEVC 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + + + ++ VVL TGTFL G I IG+ G G P+ L + Sbjct: 128 EVLVRDGRVKGVKITTGAIFLAKAVVLATGTFLGGRIIIGETVYDGGPDGMHPARYLTEN 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNRQIECGITR 244 K + R KTGTPAR+ K++ + K + Q D R +PFSF D Q+ C +T Sbjct: 188 LKKLGIEMMRFKTGTPARVHRKSLDFSKMQIQPGDLRPLPFSFENEDSFNIEQVPCYLTY 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETHRII EN+ + +++G I GPRYCPSIEDKIVRF ++ HQ+F+EP GL+TD Sbjct: 248 TTEETHRIIRENLHRAPLFTGLISGVGPRYCPSIEDKIVRFADKPRHQVFIEPTGLDTDE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+ST+LPE++Q + R++ GLE V I+RP YAIEYD INP +L PTL+ KKI GLF Sbjct: 308 MYVQGMSTSLPEDVQIKMYRSVIGLENVKIMRPAYAIEYDCINPLQLEPTLQFKKIKGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAAAQG++AGIN+A + + R+ +YIGV+IDDL +KG EPY Sbjct: 368 SAGQINGTSGYEEAAAQGIIAGINAAMYVKGKEMLVLDRSQAYIGVLIDDLVTKGTNEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLR---SLLKSL 481 R+ TSRAEYR+ LR DNAD RLT IG K+G + +R+ K++Q+ + + +K+ Sbjct: 428 RIMTSRAEYRLILRQDNADLRLTEIGYKIGLVS---SQRYEKFLQKKKMIEDEINRVKNT 484 Query: 482 VLTSKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 V+ + + K T + L P+ S ++L I P V + ++I Sbjct: 485 VIAPSEKVNKLLLGKGSSPITTGVKLSDLLKRPELSYEDLKDIDPARPDLPWYVKDEVEI 544 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E Y Y +Q+ + ++ K E + IP DYS + LS E K+KLS ++P ++ QAS+I Sbjct: 545 EIKYEGYIKKQLAQVEQFKKLENKKIPDWVDYSQILGLSTEAKQKLSQIRPASIGQASRI 604 Query: 599 EGMTPAALNLLLIYIK 614 G++PA +++LLI+++ Sbjct: 605 SGVSPADISVLLIWLE 620 >gi|325267703|ref|ZP_08134354.1| glucose inhibited division protein A [Kingella denitrificans ATCC 33394] gi|324980827|gb|EGC16488.1| glucose inhibited division protein A [Kingella denitrificans ATCC 33394] Length = 650 Score = 526 bits (1356), Expect = e-147, Method: Compositional matrix adjust. Identities = 288/619 (46%), Positives = 394/619 (63%), Gaps = 8/619 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 27 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 86 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY+ A++ + +QENL++ Q Sbjct: 87 ALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKAAIREMLENQENLELFQQS 146 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + + IS ++ + VVLT GTFL G IHIG GR GD + SL Sbjct: 147 VDDVTLDGDRISGVITAMGVEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 206 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + + GRLKTGTP R+DG+TI + + +Q D + FS + ++ RQ+ C I Sbjct: 207 GCLRELNLPQGRLKTGTPPRIDGRTIDFSQLTEQPGDTPVPVFSVRGNAEMHPRQVSCWI 266 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TNL+TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEGL T Sbjct: 267 THTNLKTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEGLTT 326 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK I G Sbjct: 327 NEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKTIQG 386 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AG N+ + D + R +Y+GV++DDL +KGV E Sbjct: 387 LFFAGQINGTTGYEEAAAQGLLAGANAVQYVRGQDPLLLRREQAYLGVLVDDLITKGVNE 446 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + + LK+ Sbjct: 447 PYRMFTSRAEYRLQLREDNADMRLTEDGHKIGLVGEAQWRMFNEKREAIEREIQRLKTTW 506 Query: 483 LTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI---CPDARKFSSLVIERL 536 T + L+ + ++ + ++ L P+ L ++ P+ R VIE++ Sbjct: 507 YTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYTALMTLEGAQPECR-LPENVIEQV 565 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y Y RQ E + E +P++ DYS + LS E+++KL+ KP + QAS Sbjct: 566 EIQVKYQGYIDRQNEEIDSRRDLETLRLPENIDYSKVKGLSAEVQQKLNQHKPETVGQAS 625 Query: 597 KIEGMTPAALNLLLIYIKK 615 +I G+TPAA+ LL++++K+ Sbjct: 626 RISGVTPAAVALLMVHLKR 644 >gi|188587518|ref|YP_001919063.1| glucose inhibited division protein A [Natranaerobius thermophilus JW/NM-WN-LF] gi|205831540|sp|B2A469|MNMG_NATTJ RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|179352205|gb|ACB86475.1| glucose inhibited division protein A [Natranaerobius thermophilus JW/NM-WN-LF] Length = 644 Score = 526 bits (1356), Expect = e-147, Method: Compositional matrix adjust. Identities = 275/614 (44%), Positives = 390/614 (63%), Gaps = 3/614 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YD+IV+G GHAGCEAA A++GA T L+T I M CNPAIGG K H+VRE+DA Sbjct: 7 NYDLIVVGAGHAGCEAALAGARIGAKTLLLTLNLDQIALMPCNPAIGGPAKSHIVREVDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQFR+LN +KGPAV+ R QAD+ Y+ M+ + ++ENL + Q V Sbjct: 67 LGGEMGKNIDDTAIQFRMLNTRKGPAVQALRAQADKIKYQERMKYILENEENLLLKQETV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E N I +V +D + C +V+T+GT+L+G I +G + G G + L Sbjct: 127 NQLMIEDNQIKGVVTKDGTYYYCEQLVITSGTYLKGRIIVGDVDYSGGPNGQQAAYGLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 F + R KTGTPAR+ K++ +D+ E Q D+ FSF +Q+ C +T Sbjct: 187 DFKQHGISLMRFKTGTPARVYRKSLNFDEMEIQHGDDYPWRFSFYHSSERLKQLPCYLTF 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN ETH+II +++ S +YSG I+ GPRYCPSIEDKIVRF +++ HQ+FLEPEGLNT Sbjct: 247 TNYETHKIINDSLSRSPLYSGRIEGTGPRYCPSIEDKIVRFPDKSRHQLFLEPEGLNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 Y G+ST+LP ++Q + +RTIPGLE+V I+RPGYAIEYD I+P +L TLE K+ISGLF Sbjct: 307 YYVQGMSTSLPLDVQERMLRTIPGLEEVEIMRPGYAIEYDCIDPTQLELTLEHKQISGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QG++AGIN+A+K + + R+ YIGV+IDDL +KG EPY Sbjct: 367 FAGQINGTSGYEEAAGQGILAGINAAQKIQGKEPVIIKRSQGYIGVLIDDLVTKGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSRAEYR+ LR DNAD RLT +G ++G I E ++F + +++ + LKS+ LT Sbjct: 427 RMLTSRAEYRLILRQDNADLRLTELGYQVGLIKEGNYQKFKEKLEKIESEKERLKSIKLT 486 Query: 485 -SKNLSSTSISFKQDG--KTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +KN+ + G K T + L P+ S + L V E+++I+ Sbjct: 487 PNKNVQNFMEEHNTSGLKKPTTLFHILKRPEISYEALEYFDETRPDLPLEVTEQIEIQIK 546 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y +Q+ + + + E RLIP D DYS + LS E +EKL +P ++ QA++I G+ Sbjct: 547 YEGYIDKQVEQVQRFEKLEARLIPDDIDYSQISGLSIEAREKLQTYRPRSVGQANRISGI 606 Query: 602 TPAALNLLLIYIKK 615 P+ +++L++Y+++ Sbjct: 607 DPSDISVLMVYLEQ 620 >gi|294505874|ref|YP_003569932.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Salinibacter ruber M8] gi|294342202|emb|CBH22980.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Salinibacter ruber M8] Length = 664 Score = 526 bits (1356), Expect = e-147, Method: Compositional matrix adjust. Identities = 278/629 (44%), Positives = 394/629 (62%), Gaps = 18/629 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGH+G EAAA AA +GA T LIT K + IG MSCNPAIGG+GKGH+ REIDAL Sbjct: 8 HDVIVVGGGHSGSEAAAAAANMGADTLLITMKLADIGQMSCNPAIGGIGKGHIAREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+MGR D AGIQFR+LN KGPAV GPR Q R Y A+++E+ + +NL + V Sbjct: 68 GGIMGRATDRAGIQFRMLNKSKGPAVWGPRAQCGRRAYARAIRQELEAIDNLKMRSDMVK 127 Query: 126 GFNTEK--NIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 T+ ++ + V+LTTGTF GVIH+G+ GR+G+S S+ + Sbjct: 128 EILTDDAGETVTGVRTNLGKEFCAPCVILTTGTFSNGVIHVGEQNFGGGRIGESASHGIT 187 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI--TNRQIECG 241 F++GRLKTGTP R+DG++I + EKQ D FSF+TD + Q+ C Sbjct: 188 GCLHDLGFESGRLKTGTPPRVDGRSIDYSVMEKQPGDPDATAFSFLTDDLPSVEAQLSCW 247 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T T ETH ++ S +++G + + GPRYCPSIEDKI RF E++ HQ+F+EPEG + Sbjct: 248 LTDTTPETHEVLRTGFDRSPMFTGALDADGPRYCPSIEDKIDRFSEKDHHQLFIEPEGRD 307 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T VY NG S++LPEE+Q + +RT+PG+E+ ++ RPGYAIEYD+ P ++ +LETK + Sbjct: 308 THEVYVNGFSSSLPEEVQFEALRTVPGMEEAHMHRPGYAIEYDFFPPYQIEYSLETKYVD 367 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQINGTTGYEEAAAQG++AGIN+ +K + D I R+++YIGV+IDDL +KG Sbjct: 368 GLFFAGQINGTTGYEEAAAQGIMAGINAVQKLRQADPIVLKRSEAYIGVLIDDLVAKGTD 427 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAE+RI LR DNAD RLT +G KLG + R R + + + R L Sbjct: 428 EPYRMFTSRAEHRILLRQDNADQRLTELGHKLGLASKERLDRTREKERAIDVTRETLSDT 487 Query: 482 VLTSKNLSS--TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIER---- 535 ++ + + S+ + R E P+ ++L A + +V E Sbjct: 488 TVSPQQVDDYLQSVGTSTLNQPRPVIELCKRPEVDSEDLLR---HAGIYDEVVTEAPGML 544 Query: 536 -----LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 ++I+ Y Y RQ +E++ +E+ IP DFDY +L +S E ++KLS ++P Sbjct: 545 SAPRLIEIDLKYEGYIDRQKDMVEEMEEKERWPIPDDFDYHALDNISIEARQKLSKVEPD 604 Query: 591 NLLQASKIEGMTPAALNLLLIYIKKNTVK 619 NL QAS++ G+ + +++L++ +K V+ Sbjct: 605 NLGQASRVPGVRASDISVLMVLLKNEGVE 633 >gi|125974849|ref|YP_001038759.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium thermocellum ATCC 27405] gi|256003894|ref|ZP_05428881.1| glucose inhibited division protein A [Clostridium thermocellum DSM 2360] gi|281418696|ref|ZP_06249715.1| glucose inhibited division protein A [Clostridium thermocellum JW20] gi|166222929|sp|A3DHY7|MNMG_CLOTH RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|125715074|gb|ABN53566.1| glucose inhibited division protein A [Clostridium thermocellum ATCC 27405] gi|255992232|gb|EEU02327.1| glucose inhibited division protein A [Clostridium thermocellum DSM 2360] gi|281407780|gb|EFB38039.1| glucose inhibited division protein A [Clostridium thermocellum JW20] gi|316941971|gb|ADU76005.1| glucose inhibited division protein A [Clostridium thermocellum DSM 1313] Length = 630 Score = 526 bits (1356), Expect = e-147, Method: Compositional matrix adjust. Identities = 280/622 (45%), Positives = 391/622 (62%), Gaps = 17/622 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV V+G GHAGCEAA AA+LG T + +I +M CNP IGG KGHLVREIDAL Sbjct: 8 YDVAVVGAGHAGCEAALAAARLGVKTVVFAINLDSIANMPCNPNIGGTAKGHLVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ AD IQ ++LN KGPAV R Q DR Y++ M+ + QENLDV Q E+ Sbjct: 68 GGEMGKNADKTFIQSKILNSAKGPAVYSLRAQVDRRSYQIEMKNTLEKQENLDVKQAEIV 127 Query: 126 GFNTE----KNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 + K + + ++ + V+L TGT+L+G I IG + G G P+N Sbjct: 128 EILYDEVEGKKTVRGVKTHTGAIYKSKVVILATGTYLKGKIIIGDVSYSGGPDGLFPANK 187 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L +S + + R KTGTPAR++ ++I + K E+Q DER++PFSF ++I Q+ C Sbjct: 188 LSDSLREMGIELMRFKTGTPARVNRRSIDFSKMEEQPGDERIVPFSFENEEIKKEQVSCY 247 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN ETHRII EN+ S ++ G I+ GPRYCPSIEDK+VRF ++ HQ+F+EP GLN Sbjct: 248 LTYTNSETHRIIRENLHRSGLFGGLIEGIGPRYCPSIEDKVVRFSDKESHQVFVEPMGLN 307 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T +Y G+ST+LPE++Q + +RTIPGLE V+I+R YAIEYD INP +L +LE + + Sbjct: 308 TQEMYLQGMSTSLPEDVQIEMLRTIPGLENVSIMRNAYAIEYDCINPTQLKLSLELRDVE 367 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQINGT+GYEEAAAQG++AGIN+ARK L+ + R+ +YIGV+IDD+ +KG Sbjct: 368 GLFTAGQINGTSGYEEAAAQGIIAGINAARKIKGLEPLILDRSQAYIGVLIDDIVTKGTN 427 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF--AKYIQEYNFLRSLLK 479 EPYRM TSRAEYR+ LR DNAD RLTPIG ++G I E R ++F + + E R Sbjct: 428 EPYRMMTSRAEYRLLLRQDNADLRLTPIGYEVGLISEERYRKFEEKRRLIEQEIERVKKT 487 Query: 480 SLVLTS------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVI 533 ++ T K +ST I + A + L P+ L I + S V Sbjct: 488 NIAPTEKVNEFLKKHNSTPIK----SGVKLA-DLLRRPELDYDTLAEIDENRPDLSFAVR 542 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E++ I Y Y RQM + ++ K E+R + KD +Y + L E ++KL+ +KP ++ Sbjct: 543 EQVSISIKYEGYIKRQMQQVEQFKKLEERKLDKDINYDEIKGLRLEARQKLNKIKPESVG 602 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I G++PA +++LL+Y+++ Sbjct: 603 QASRISGVSPADISVLLVYLEQ 624 >gi|320354723|ref|YP_004196062.1| glucose inhibited division protein A [Desulfobulbus propionicus DSM 2032] gi|320123225|gb|ADW18771.1| glucose inhibited division protein A [Desulfobulbus propionicus DSM 2032] Length = 627 Score = 526 bits (1355), Expect = e-147, Method: Compositional matrix adjust. Identities = 288/630 (45%), Positives = 384/630 (60%), Gaps = 30/630 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D+ VIG GHAGCEAA AA++G ST + TIG+MSCNPAIGGL KGHLV+EIDAL Sbjct: 4 FDIAVIGAGHAGCEAALAAARMGCSTLVCVINADTIGAMSCNPAIGGLAKGHLVKEIDAL 63 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + DA GIQFR LN KGPAVR R QADR LYRL M+ + +Q NL + Q V Sbjct: 64 GGEMAKNIDATGIQFRRLNTSKGPAVRSSRAQADRLLYRLRMKHILENQPNLAIRQAVVD 123 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + +R +V+ TGTFL G+IH+G PAGRMGD+PS L Sbjct: 124 EILIENGRVVGLRTSLDECVRVRAIVVATGTFLNGLIHVGLKNFPAGRMGDAPSTKLAQW 183 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 F F GR+KTGT RLDG +I + + Q++DE+ FSF + Q C IT Sbjct: 184 FASTGFTVGRMKTGTVPRLDGNSIDYSQLVAQYSDEQPALFSFSSHGAPPLVQRPCYITY 243 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II ++I S +Y+G I+ G RYCPSIEDK++RF E+ HQIFLEPEGL T Sbjct: 244 TNERTHDIIRQSIHQSPMYAGIIEGVGARYCPSIEDKVMRFPEKVRHQIFLEPEGLETIE 303 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGI T+LP Q + + +I GLE IIRPGYAIEYDY++P+EL P+LETKKI GLF Sbjct: 304 VYPNGIPTSLPLATQIEMVHSIQGLEHARIIRPGYAIEYDYVDPRELKPSLETKKIVGLF 363 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGT+GYEEAA QGL+A INS + + + R+ +Y+GV+IDDL + G EPY Sbjct: 364 LAGQINGTSGYEEAAGQGLMAAINSVQYVRGEEPVILDRSQAYLGVLIDDLVTLGTKEPY 423 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL--- 481 R+FTSRAEYR+ LR DNAD RL PIG ++G + E + +++ + ++ +L L Sbjct: 424 RLFTSRAEYRLLLREDNADMRLRPIGHRIGLVDE---PTWHEFVHKKEYISRVLHYLHET 480 Query: 482 ----------VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSIC------PDA 525 L + N + S + T E L P+ + L + P Sbjct: 481 RIKPVPGINAFLAAHNAPALS-------QAMTLAELLRRPEIRLHMLAQMSRAVDSLPPF 533 Query: 526 RKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 + + + ++++ Y Y RQ + K E +P Y LP LSNE+ EKL+ Sbjct: 534 PEEALAFHDEIELQIKYEGYIKRQEEQISRFKKLESIELPPGLVYKGLPGLSNEVVEKLT 593 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 ++P +L QAS+I G+TPAAL++L +++K+ Sbjct: 594 RVQPRSLGQASRISGVTPAALSVLQVHLKR 623 >gi|268318296|ref|YP_003292015.1| glucose inhibited division protein A [Rhodothermus marinus DSM 4252] gi|262335830|gb|ACY49627.1| glucose inhibited division protein A [Rhodothermus marinus DSM 4252] Length = 644 Score = 526 bits (1355), Expect = e-147, Method: Compositional matrix adjust. Identities = 294/629 (46%), Positives = 397/629 (63%), Gaps = 24/629 (3%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 + YDVIV+GGGHAG EAAA AA++GA T LIT TIG MSCNPAIGG+GKGHLVREI Sbjct: 17 DERYDVIVVGGGHAGAEAAAAAARMGARTLLITMSLETIGRMSCNPAIGGIGKGHLVREI 76 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G+MGR+AD GIQFR+LN KGPAV GPR Q DR+ Y A++ E+ S NL + Sbjct: 77 DALGGIMGRMADQTGIQFRMLNRSKGPAVWGPRAQCDRKRYAEAVRHELESIPNLWMRAD 136 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 V E + + Q V+LT GTFL GVIH+G+ ++ GRMG+ + L Sbjct: 137 TVTEVLVEDRRVKGVRTQLGKTFYAPCVILTNGTFLNGVIHVGERQLGGGRMGERAATGL 196 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGI 242 + F++GRLKTGTP R+DG+TI + + ++Q D +PFS+MTD++ +RQ+ C + Sbjct: 197 TACLERLGFESGRLKTGTPPRIDGRTIDYSRLQEQPGDSEPLPFSYMTDRLPDRQLSCWL 256 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T T E H I+ S +++G IK GPRYCPSIEDKI RF ER+ H IFLEPEG +T Sbjct: 257 TYTTPEVHAILRTGFDRSPMFTGRIKGRGPRYCPSIEDKIERFAERDRHPIFLEPEGWDT 316 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 VY NG ST+LPEE+Q +R IPGLE+V+++RPGYAIEYDY P ++ +LETK + G Sbjct: 317 YEVYVNGFSTSLPEEVQVAALRKIPGLERVHVLRPGYAIEYDYFPPYQIRYSLETKYVEG 376 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AGIN+ +K + + R+++YIGV+IDDL +KG E Sbjct: 377 LFFAGQINGTTGYEEAAAQGLMAGINAVQKLRGAEPVVLRRSEAYIGVLIDDLVAKGTDE 436 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAE+RI LR DNAD RLT +G +LG R +R K + R L+ Sbjct: 437 PYRMFTSRAEHRILLRQDNADLRLTELGYRLGLATRERYERMLKKKEAIARTRRALEETT 496 Query: 483 LTSKNLS------STSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----------CPDAR 526 + + ++ TS + + R A P ++++L P Sbjct: 497 VRPEQVNGYLERVGTSPIDRPERLVRLALR----PQVNLRDLLEATGLREQVVVPAPGME 552 Query: 527 KFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSI 586 LV +IE Y Y R+ ++++ E IP DFDY ++ +S E +EKLS Sbjct: 553 PVEMLV----EIELKYEGYMDRERELVEKMRELEDWRIPPDFDYEAVETISKEAREKLSK 608 Query: 587 LKPFNLLQASKIEGMTPAALNLLLIYIKK 615 ++P NL QAS+I G+ PA +++L++ +++ Sbjct: 609 IRPENLGQASRISGVRPADISVLMVLLRR 637 >gi|332703832|ref|ZP_08423920.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Desulfovibrio africanus str. Walvis Bay] gi|332553981|gb|EGJ51025.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Desulfovibrio africanus str. Walvis Bay] Length = 630 Score = 526 bits (1355), Expect = e-147, Method: Compositional matrix adjust. Identities = 270/614 (43%), Positives = 380/614 (61%), Gaps = 5/614 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 + +IV+G GHAGCEAA +A+LG T L+T IG +SCNPAIGGL KGH+V+EIDAL Sbjct: 14 FALIVVGAGHAGCEAAMASARLGLPTLLLTINVDRIGHLSCNPAIGGLAKGHIVKEIDAL 73 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG AD AGIQFR+LN +KGPAVR R Q DR Y +QR++ +Q+NL ++Q Sbjct: 74 GGRMGLWADQAGIQFRILNTRKGPAVRATRAQIDRREYMRVVQRDLFAQDNLWILQDMAE 133 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + + + V+LTTGTFL+G+IH+G + GRMGD S L + Sbjct: 134 AVLVKNGRAAGVATSLGQRFASHAVLLTTGTFLQGLIHVGLMNYSGGRMGDPASVGLSKN 193 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + GRLKTGT RL +I + E Q D +PFSF + + Q++C IT T Sbjct: 194 LADLGLELGRLKTGTTPRLLKGSIDFSGLEPQPGDNPPLPFSFHSPGVVLPQVDCHITYT 253 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N TH I E + S +++G IK G RYCPSIEDK+ RF ++ HQ+F+EPEGL++ V Sbjct: 254 NERTHAAIREGFERSPMFTGIIKGTGARYCPSIEDKVARFPDKERHQVFIEPEGLDSPEV 313 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YP+GI T+LP +IQ + I +IPGLE+ I+RPGYAIEYD++ P +L PTLETK + GL+L Sbjct: 314 YPSGIPTSLPLDIQKRMIASIPGLEQAQIVRPGYAIEYDFVPPMQLQPTLETKVLPGLYL 373 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGT+GYEEAA QGL A +N+ + R +Y+ VM+DDL +KG EPYR Sbjct: 374 AGQINGTSGYEEAAGQGLWAALNACCALRGQEPFLPGRDQAYLAVMVDDLVTKGTNEPYR 433 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL-- 483 MFTSRAE+R+ LR NAD RLT G +LG + + + F+ + + L +L+S ++ Sbjct: 434 MFTSRAEHRLLLREGNADARLTQAGRELGLVDDAQWATFSAKQTDISELMLILESYIIRP 493 Query: 484 --TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 ++++ +T ++ GK L P+ +I+ L CP+ K++ V+ + Sbjct: 494 DAATRDILAT-MAATAPGKAVPLTAILRQPEVAIEALAPFCPELPKYAEGVLREAETRIK 552 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y RQ + +E+ +P D +Y+++P LS E EKLS ++P L QAS+I G+ Sbjct: 553 YEGYLKRQEELVLRSRRQEETALPYDTEYAAIPGLSREAVEKLSRVRPLTLGQASRISGI 612 Query: 602 TPAALNLLLIYIKK 615 TPAA++ L I++KK Sbjct: 613 TPAAISCLEIHLKK 626 >gi|308509486|ref|XP_003116926.1| hypothetical protein CRE_02046 [Caenorhabditis remanei] gi|308241840|gb|EFO85792.1| hypothetical protein CRE_02046 [Caenorhabditis remanei] Length = 637 Score = 526 bits (1355), Expect = e-147, Method: Compositional matrix adjust. Identities = 279/619 (45%), Positives = 392/619 (63%), Gaps = 11/619 (1%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALD 66 DVIVIGGGHAGCE+AA +A+ G+ T L+T +TIG MSCNP+ GG+GKGHL+RE+DALD Sbjct: 18 DVIVIGGGHAGCESAAASARCGSKTILVTQNKNTIGEMSCNPSFGGIGKGHLIREVDALD 77 Query: 67 GLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAG 126 GL R+ D + I ++ LN +GPAV G R Q DR+LY+ MQ EI S E L+V++GEVA Sbjct: 78 GLCARICDKSAITYQALNRAQGPAVLGLRAQIDRKLYKKHMQNEINSTERLEVVEGEVAE 137 Query: 127 FNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSF 186 + + + M ++++I VV+TTGTFLR I+ G PAGR+G+ S+ L SF Sbjct: 138 LLVKNKKVVGVKMANDTIISTKCVVITTGTFLRAQIYQGMKVWPAGRIGEKSSDILSESF 197 Query: 187 MKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR---QIECGIT 243 ++ F+ GRL+TGTP RL +I + K E D++ IPFSF+T+ I + Q+ + Sbjct: 198 LQHGFELGRLRTGTPPRLMKDSIDFSKFEMVKPDQKPIPFSFLTENIWIKYEDQLPTYLG 257 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN ET RI EN+ + Y ++ PRYCPS E K++RF + H++FLE EGL++ Sbjct: 258 HTNEETCRIGQENMHEN--YQVASETTSPRYCPSFESKVLRFPKLQ-HRLFLEHEGLDSP 314 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YP G+S E+Q + R IPGLE V I +PGY ++YD++NPK+L TLET+K+ G+ Sbjct: 315 HIYPQGMSMTFKPEVQKEIFRAIPGLENVEIFQPGYGVQYDFVNPKQLKKTLETQKVEGM 374 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 FLAGQINGTTGYEEAAAQG+VAGIN++ ++ + SRT++YIGV+IDDLTS G EP Sbjct: 375 FLAGQINGTTGYEEAAAQGVVAGINASARAQNEPAMEVSRTEAYIGVLIDDLTSLGTNEP 434 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFL----RSLLK 479 YRM TSRAE+R+ LRPDNAD RLT +G + I + R F+K N L + Sbjct: 435 YRMLTSRAEFRLHLRPDNADIRLTELGRRHNAISDERWSTFSKTRDALNDLTEKTEQMKM 494 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 S+V + + S + + +GK +A+E + D ++L D K ++ERL+IE Sbjct: 495 SVVKWKRVIPKLSATTRNEGKVLSAFELVHRYDLGKEDLEMGLQDV-KVDEKILERLKIE 553 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y R + +EI E IP + D+S + +S E EKL +P NL A++I Sbjct: 554 GRYRMEHERMKAKKQEIDRESATEIPDNIDFSKMRGMSLECIEKLERARPRNLAAATRIS 613 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+TP A+ +L+ Y+K V Sbjct: 614 GITPEAIVVLMRYLKSPAV 632 >gi|304313412|ref|YP_003813010.1| Glucose-inhibited division protein A [gamma proteobacterium HdN1] gi|301799145|emb|CBL47388.1| Glucose-inhibited division protein A [gamma proteobacterium HdN1] Length = 627 Score = 526 bits (1354), Expect = e-147, Method: Compositional matrix adjust. Identities = 290/620 (46%), Positives = 394/620 (63%), Gaps = 5/620 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIGGGHAG EAA AA++G T L++H T+G MSCNPAIGG+GK HLV+EID Sbjct: 5 KHYDVIVIGGGHAGTEAALAAARMGCQTLLLSHNIETLGQMSCNPAIGGIGKSHLVKEID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G+M R AD AGIQFRVLN +KGPAVR R QADR LY+ A+++ + +Q+NLD+ Q Sbjct: 65 ALGGVMARAADRAGIQFRVLNSRKGPAVRATRAQADRILYKAAIRQTLENQDNLDIFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 + + +V R TVVLT GTFL G IHIG GR GD PS +L Sbjct: 125 ADDLIVVGDQVQGVVTHSGIRFRSHTVVLTVGTFLGGKIHIGLESHAGGRAGDPPSIALA 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGI 242 + + RLKTGTP R+D +++ + ++Q D SFM + + +QI C I Sbjct: 185 HRLRELPLRVDRLKTGTPPRIDARSVDFSVMQEQPGDTPTPVMSFMGNLSDHPKQISCYI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++N HQ+FLEPEGL T Sbjct: 245 THTNESTHEIIRSGLNRSPMYTGVIEGIGPRYCPSIEDKIHRFADKNQHQVFLEPEGLTT 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNGIST+LP +IQ + + +I GLE +I+RPGYAIEYDY +P++L P+L TK + G Sbjct: 305 HELYPNGISTSLPFDIQLKLVHSIRGLEHAHILRPGYAIEYDYFDPRDLHPSLATKTLGG 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQINGTTGYEEAAAQGL+AG N+A R +Y+GV++DDL + G E Sbjct: 365 LYFAGQINGTTGYEEAAAQGLLAGANAALSVQGKAPWTPHRDQAYLGVLVDDLITMGTRE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT G +LG + + R F K + L+ + Sbjct: 425 PYRMFTSRAEYRLILREDNADLRLTEKGRELGLVDDTRWSAFCKKREAIARETERLRCIR 484 Query: 483 LTSKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 ++ ++L + I+ + + Y E L P+ +L ++ DA + V E+++I Sbjct: 485 ISPESLIAERINQHTEHAIQREYSLLELLKRPELGYADLGNLTGDAVE-DPAVAEQVEIN 543 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + Y Y RQ E ++ E+ +P+ FD++ + LSNE +KL +KP + QAS+I Sbjct: 544 AKYEGYILRQKEEISRLRASEETRLPEGFDFTKVKGLSNEATQKLVAVKPATIGQASRIP 603 Query: 600 GMTPAALNLLLIYIKKNTVK 619 G+TPAA++LLLI++KK+ K Sbjct: 604 GITPAAISLLLIHLKKSDSK 623 >gi|121730055|ref|ZP_01682464.1| glucose inhibited division protein A [Vibrio cholerae V52] gi|121628204|gb|EAX60727.1| glucose inhibited division protein A [Vibrio cholerae V52] Length = 631 Score = 526 bits (1354), Expect = e-147, Method: Compositional matrix adjust. Identities = 283/626 (45%), Positives = 384/626 (61%), Gaps = 15/626 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA AA+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHETFDVIVVGGGHAGTEAALAAARTGQRTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D AGIQFR LN KGPAVR R QADR LY+ + + + NL + Sbjct: 62 EVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVCNVLENTPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + I +V Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQAVDDVIVEHDHIRGVVTQMGLKFHAKAVVLTVGTFLGGKIHIGLENYAGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D ++ + E Q D FSFM + + RQI Sbjct: 182 ALAHRLRELPFRVDRLKTGTPPRIDANSVDFSVLEAQHGDNPTPVFSFMGKREHHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +++ HQIF+EPEG Sbjct: 242 CYITHTNERTHDVIRANLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADKDSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTTELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 IHGLFFAGQINGTTGYEEAAAQGLMAGLNASLYSQDKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG + + R RF + I R L+ Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLVDDARWARFNQKIDNMAKERQRLQ 481 Query: 480 SLVLTSKN--------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL 531 + + L T +S + G+ + L P+ + + L ++ A Sbjct: 482 ETWMNPNSVGVEQLNTLLKTPMSREASGE-----DLLRRPEMTYELLTTLPAFAPALEDA 536 Query: 532 -VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 E+++I+ Y Y RQ E ++ E +P + DY + LSNE+ KL+ KP Sbjct: 537 EAAEQVEIQVKYDGYIQRQQDEIEKSLRHEHTKLPAELDYKQVKGLSNEVVLKLNAAKPE 596 Query: 591 NLLQASKIEGMTPAALNLLLIYIKKN 616 + AS+I G+TPAA+++LL+++KK+ Sbjct: 597 TIGIASRISGITPAAISILLVHLKKH 622 >gi|328699225|ref|XP_003240872.1| PREDICTED: protein MTO1 homolog, mitochondrial-like isoform 2 [Acyrthosiphon pisum] Length = 659 Score = 526 bits (1354), Expect = e-147, Method: Compositional matrix adjust. Identities = 278/636 (43%), Positives = 417/636 (65%), Gaps = 23/636 (3%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 ++ YDVIV+GGGHAG EA + AA++GAST L+THK S++G MSCNP+ GG+GKGHL+REI Sbjct: 28 SKQYDVIVVGGGHAGTEACSAAARMGASTLLVTHKKSSVGEMSCNPSFGGIGKGHLMREI 87 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQE-NLDVIQ 121 DALDGL ++ D +GI +++LN +KGPAV G R Q DR+LY++ MQ E+ NL++I+ Sbjct: 88 DALDGLCAKICDLSGIHYKILNRRKGPAVWGLRAQVDRKLYKMYMQAELFENTPNLNIIE 147 Query: 122 GEVAGFNTE-KNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 G V + N + +++++ ++IR V+LTTGTFL G ++ G P GR+ PS Sbjct: 148 GSVDNILLDNNNQCTGVLLENGTLIRTKCVILTTGTFLNGEMYSGMTVKPGGRINSKPSI 207 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR---Q 237 L N+ + F+TGR+KTGTP R++ ++I + Q D+ PFSFM + + + Q Sbjct: 208 GLANTLKRLGFNTGRMKTGTPPRIEKQSINFTNLNYQSGDDLPTPFSFMNNSVWLKPEDQ 267 Query: 238 IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 I+ +T TN + H+I+++N+ + ++K GPRYCPS+E K ++F +R+ HQI+LE Sbjct: 268 IKSYLTYTNSKVHQIVIDNLSVNRHIKEEVK--GPRYCPSLESKSLKFRDRH-HQIWLEI 324 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EG +++VVYPNG+S LPE++Q + IR+I GLE GY +EYDY++P+EL+PTLET Sbjct: 325 EGFDSNVVYPNGLSCTLPEDLQVKMIRSINGLENAQHYISGYGVEYDYVDPRELYPTLET 384 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSN--KLDCICFSRTDSYIGVMIDDL 415 KKI LF AGQINGTTGYEEAAAQG++AGIN+ + ++ + SRT++YIGV++DDL Sbjct: 385 KKIGHLFFAGQINGTTGYEEAAAQGILAGINAGASVSVKQIFFLTLSRTEAYIGVLVDDL 444 Query: 416 TSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLR 475 T++G EPYRMFT RAE+R+ LRPDNAD RLT G +GC+ + R+ + + + L Sbjct: 445 TTQGTDEPYRMFTGRAEFRLHLRPDNADIRLTQKGYDIGCVS---KTRYDQTLSIRSSLE 501 Query: 476 SLLKSLVLTSKNL----SSTSISFKQDGKTRTAYEF--LSYPDFSIQNLFSICPD--ARK 527 +K L S+ + S + ++ +T+TA+E LS +++ L I PD + Sbjct: 502 EGIKLLTSVSQTMYKWKKSLGLKTSRNPETKTAFEILGLSNEGITLRQLEMILPDNFGGQ 561 Query: 528 FSSLVI-ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLP-ALSNELKEKLS 585 F I ERL+IE+ Y A T Q + + ++ ++ L+PKD DY+ ++S E EKLS Sbjct: 562 FEDNRIRERLKIEALYQASTYDQQEDIERVEVDQSLLLPKDIDYTHTSLSISKEEIEKLS 621 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVKLN 621 ++P + A +I G+ P+ + LL YIK + ++ Sbjct: 622 YIQPQTIGAAGRIPGIKPSTVLRLLYYIKNQKINIS 657 >gi|332969561|gb|EGK08579.1| glucose inhibited division protein A [Kingella kingae ATCC 23330] Length = 640 Score = 525 bits (1353), Expect = e-147, Method: Compositional matrix adjust. Identities = 286/619 (46%), Positives = 397/619 (64%), Gaps = 8/619 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 17 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 76 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY+ A++ + +Q NL++ Q Sbjct: 77 ALGGAMALATDMSGIQFRHLNASKGAAVRATRAQADRILYKAAIRHMLENQPNLELFQQA 136 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + + IS ++ + VVLT GTFL G IHIG GR GD + SL Sbjct: 137 VDDVTLDGDRISGVITAMGVEFKARAVVLTAGTFLSGKIHIGLNNYAGGRAGDPAAQSLG 196 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGI 242 + + GRLKTGTP R+DG+TI + K +Q D + FS + + +QI C I Sbjct: 197 GRLRELNLPQGRLKTGTPPRIDGRTIDFSKLTEQAGDTPVPVFSVRGNAAMHPQQISCWI 256 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEGL T Sbjct: 257 THTNEQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEGLTT 316 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + YPNGIST+LP +IQ +R++ GLE +I+R GYAIEYDY +P+ L +LETK I+G Sbjct: 317 NEYYPNGISTSLPFDIQIGLVRSMKGLENAHILRAGYAIEYDYFDPRNLKASLETKTIAG 376 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AG N+ + + D + R +Y+GV++DDL +KGV E Sbjct: 377 LFFAGQINGTTGYEEAAAQGLLAGANAVQFIREQDPLLLRREQAYLGVLVDDLITKGVNE 436 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT +G ++G + E + + F ++ L+ Sbjct: 437 PYRMFTSRAEYRLQLREDNADMRLTELGYQIGLVSEEQWRAFDTKREQIEQEIQRLRGTW 496 Query: 483 LTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL---VIERL 536 T + LS + + ++ + ++ L P+ + NL ++ P+A + L V+E++ Sbjct: 497 YTPQKLSESEQMRVFGQKLSREANLHDLLRRPNLNYANLMTL-PNALPENPLPNNVVEQV 555 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y Y RQ E E K E +P D DY+ + LS E+++KL+ KP L QAS Sbjct: 556 EIQVKYQGYIDRQNDEIAERKDIETMKLPADIDYAKVKGLSAEVQQKLNAHKPETLGQAS 615 Query: 597 KIEGMTPAALNLLLIYIKK 615 +I+G+TPA++ LL++++++ Sbjct: 616 RIQGITPASVALLMVHLRR 634 >gi|294789396|ref|ZP_06754633.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Simonsiella muelleri ATCC 29453] gi|294482609|gb|EFG30299.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Simonsiella muelleri ATCC 29453] Length = 628 Score = 525 bits (1353), Expect = e-147, Method: Compositional matrix adjust. Identities = 289/621 (46%), Positives = 398/621 (64%), Gaps = 12/621 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L++H T+G MSCNPAIGG+GKGHLVRE+D Sbjct: 5 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLSHNIETLGQMSCNPAIGGIGKGHLVREVD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY++A++ + +QENL++ Q Sbjct: 65 ALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKVAIREMLENQENLELFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + + +S + + +VVLT GTFL G IHIG GR GD + +L Sbjct: 125 VTDITLDGDRVSGVNTAMGLEFKARSVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKTLG 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGI 242 + + GRLKTGTP R+DG+TI + + +Q D FS ++ + RQI C I Sbjct: 185 TRLREMNLPQGRLKTGTPPRIDGRTIDFSQLTEQAGDTPTPIFSVRGNQAMHPRQISCWI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TNL+TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEGL T Sbjct: 245 THTNLKTHEIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEGLTT 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L ++ETK I+G Sbjct: 305 HEYYPNGISTSLPFDIQLALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASMETKTIAG 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AG N+ + + D + R +Y+GV++DDL +KGV E Sbjct: 365 LFFAGQINGTTGYEEAAAQGLLAGANAVQFVREQDPLLLRREQAYLGVLVDDLITKGVNE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL--LKS 480 PYRMFTSRAEYR+ LR DNAD RLT +G ++G + E++ + F + N R + LKS Sbjct: 425 PYRMFTSRAEYRLQLREDNADMRLTELGYRIGLVSEQQWRDFG--TKRENIEREIQRLKS 482 Query: 481 LVLTSKNL--SSTSISFKQD-GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL---VIE 534 T L + F Q + ++ L P+ L ++ P+A S L V+E Sbjct: 483 TWYTPLKLDVAEQERVFGQKLAREANLHDLLRRPNLDYTKLMTL-PNALPESPLADDVVE 541 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E + E +P++ DY+ + LS E+++KL+ KP + Q Sbjct: 542 QVEIQVKYQGYIDRQNDEIDSRRDIETLRLPENIDYAKVKGLSAEVQQKLNKYKPETVGQ 601 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G+TPAA+ LL++++K+ Sbjct: 602 ASRISGVTPAAVALLMVHLKR 622 >gi|23100945|ref|NP_694412.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Oceanobacillus iheyensis HTE831] gi|38372364|sp|Q8EKU3|MNMG_OCEIH RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|22779180|dbj|BAC15446.1| glucose-inhibited division protein A [Oceanobacillus iheyensis HTE831] Length = 629 Score = 525 bits (1353), Expect = e-147, Method: Compositional matrix adjust. Identities = 277/624 (44%), Positives = 395/624 (63%), Gaps = 17/624 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAG E+A AA++GA T ++T I M CNP+IGG KG +VREIDA Sbjct: 7 NYDVIVVGAGHAGVESAYAAARMGAKTLMLTLNLDMIAFMPCNPSIGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G+MG+V D + IQ R+LN KGPAV+ R QAD+ +Y M+ + ++ENL + QG V Sbjct: 67 LGGIMGKVIDKSYIQMRMLNTGKGPAVQALRAQADKPIYMKEMKHLMENEENLTIRQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E I ++ + ++ +V++TTGTF+RG + +G L+ +G S L Sbjct: 127 NELIVEDGICKGVITETHAAYYADSVIVTTGTFMRGKVLMGDLEYESGPNNQRVSIKLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 K F+ R KTGTP R++ TI + KTE Q D+ FS+ T + QI C +T Sbjct: 187 DLEKHGFEITRFKTGTPPRVNSHTIDYSKTEIQPGDDNPKSFSYETTEQITDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH++I +N++ S++YSG + GPRYCPSIEDKIVRF ++ HQIFLEPEG +T+ Sbjct: 247 TNEFTHQVINDNLELSSMYSGMKRGTGPRYCPSIEDKIVRFNDKPRHQIFLEPEGRDTEE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE IQH+ I+++PGLEK I+R GYAIEYD + P +L+PTLETK++ GLF Sbjct: 307 VYVQGLSTSLPESIQHEMIKSVPGLEKAEIMRAGYAIEYDAVVPTQLWPTLETKRLPGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AG+N+A KS + I R+ +YIGVMIDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGMNAAAKSLNKEPIILDRSQAYIGVMIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT IG G I E R +RF + Q+ + L +++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTDIGYDYGLITEERYQRFTEKKQQIEQEKKRLSKIII- 485 Query: 485 SKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 K ++ G +R AY+ + P+ S + + + S V E++ I+ Sbjct: 486 -KPTEDIQDIMEKAGASRLKEAIKAYDLMKRPELSYDIVDQMIESNLELSEEVKEQVAIQ 544 Query: 540 SSYAAYTGRQMIEAKE-----IKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 Y Y + AKE +K E+K+ IP+D DY ++ ++ E EKL ++P ++ Q Sbjct: 545 IKYEGYIKK----AKEQVDRMLKMEDKK-IPEDIDYDAINGIATEAVEKLKKVRPLSVGQ 599 Query: 595 ASKIEGMTPAALNLLLIYIKKNTV 618 AS+I G+ PA +++LL+YI++ ++ Sbjct: 600 ASRISGVNPADVSILLVYIEQGSI 623 >gi|190346857|gb|EDK39035.2| hypothetical protein PGUG_03133 [Meyerozyma guilliermondii ATCC 6260] Length = 703 Score = 525 bits (1353), Expect = e-147, Method: Compositional matrix adjust. Identities = 275/646 (42%), Positives = 403/646 (62%), Gaps = 32/646 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 + V+VIGGGHAGCEAA +A+ G T LIT S IG+ SCNP++GG+GKG L+RE+DAL Sbjct: 55 HPVVVIGGGHAGCEAATGSARSGTPTTLITPDISKIGTASCNPSMGGVGKGTLLREVDAL 114 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DG+ ++ D AGI F++LN KG AV GPR Q DR +Y MQ+ IL+ NL V++ EV Sbjct: 115 DGVASKITDKAGIHFKILNASKGAAVHGPRAQIDRSIYLKEMQKTILNYPNLTVLEAEVK 174 Query: 126 GF---NTEKNI----------ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAG 172 + E N I +V+ D+ ++ CS VV+TTGTFL IHIG PAG Sbjct: 175 DIIIEDVETNSSDFTGRKYGSIVGVVLGDSRVLSCSKVVVTTGTFLSAEIHIGLESFPAG 234 Query: 173 RMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK 232 RMG++ + L +F + F GRLKTGTP RL +TI ++ +Q +D P S+M+ K Sbjct: 235 RMGENATFGLSKTFKEAGFRLGRLKTGTPPRLSSRTIRYEGLSEQKSDYPPAPMSYMSSK 294 Query: 233 I--TNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNG 290 + ++ + C IT T E H++I +N+ S +K GPRYCPSIE KI++F ++ Sbjct: 295 VDLQDQLVSCHITFTTAEMHKLIADNLDKSIHIKETVK--GPRYCPSIESKIIKFPQKTS 352 Query: 291 HQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKE 350 H ++LEPEGL+TD+VYPNGIS +P E+Q + ++ +PG E V +++PGY +EYD+++P+E Sbjct: 353 HMVWLEPEGLDTDLVYPNGISCTMPHELQEKLVKLMPGCEDVKMVQPGYGVEYDFVDPRE 412 Query: 351 LFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGV 410 L TLETK + GL+LAGQINGTTGYEEAAAQG +AGIN+ + R+D Y+GV Sbjct: 413 LRQTLETKLVDGLYLAGQINGTTGYEEAAAQGCLAGINAGLSLAGKPPLIVQRSDGYLGV 472 Query: 411 MIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQE 470 ++DDL +KGV EPYRMFTSR+E+RIS+R DNAD RLT G G + E R K + + Sbjct: 473 LVDDLITKGVEEPYRMFTSRSEFRISIRSDNADKRLTEKGYLAGVVSEERYKHYKNEMNN 532 Query: 471 YNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTA----YEFLSYPDFSIQNLFSICPD-- 524 ++ ++S L+S+ L+ + ++ + RTA ++ LSY D ++ L P Sbjct: 533 FDAIKSFLQSVSLSGARWAP-ALKGTESDVNRTAVVDGWKLLSYRDVDLELLMKSLPQIV 591 Query: 525 ---ARKFSSL---VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPAL-- 576 F S+ ++ R+ +ES+Y + ++ + K +E L+PK+F Y++ L Sbjct: 592 GDLPPVFDSINPRLLNRIDVESTYEPWMKKEEAHLRAYKADENLLLPKNFVYNNEGNLKI 651 Query: 577 SNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVKLNE 622 S E+ L+ ++P + QA +I+G+TPAA+ L +K N +L + Sbjct: 652 SYEVCHLLNTIQPKTIGQARRIQGVTPAAIFELFKLVKGNQSQLAQ 697 >gi|193734233|gb|ACF19885.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Kingella kingae] Length = 628 Score = 525 bits (1352), Expect = e-147, Method: Compositional matrix adjust. Identities = 286/619 (46%), Positives = 397/619 (64%), Gaps = 8/619 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 5 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY+ A++ + +Q NL++ Q Sbjct: 65 ALGGAMALATDMSGIQFRHLNASKGAAVRATRAQADRILYKAAIRHMLENQPNLELFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + + IS ++ + VVLT GTFL G IHIG GR GD + SL Sbjct: 125 VDDVTLDGDRISGVITAMGVEFKARAVVLTAGTFLSGKIHIGLNNYAGGRAGDPAAQSLG 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGI 242 + + GRLKTGTP R+DG+TI + K +Q D + FS + + +QI C I Sbjct: 185 GRLRELNLPQGRLKTGTPPRIDGRTIDFSKLTEQAGDTPVPVFSVRGNAAMHPQQISCWI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEGL T Sbjct: 245 THTNEQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEGLTT 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + YPNGIST+LP +IQ +R++ GLE +I+R GYAIEYDY +P+ L +LETK I+G Sbjct: 305 NEYYPNGISTSLPFDIQIGLVRSMKGLENAHILRAGYAIEYDYFDPRNLKASLETKTIAG 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AG N+ + + D + R +Y+GV++DDL +KGV E Sbjct: 365 LFFAGQINGTTGYEEAAAQGLLAGANAVQFIREQDPLLLRREQAYLGVLVDDLITKGVNE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT +G ++G + E + + F ++ L+ Sbjct: 425 PYRMFTSRAEYRLQLREDNADMRLTELGYQIGLVSEEQWRAFDTKREQIEQEIQRLRGTW 484 Query: 483 LTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL---VIERL 536 T + LS + + ++ + ++ L P+ + NL ++ P+A + L V+E++ Sbjct: 485 YTPQKLSESEQMRVFGQKLSREANLHDLLRRPNLNYANLMTL-PNALPENPLPNNVVEQV 543 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y Y RQ E E K E +P D DY+ + LS E+++KL+ KP L QAS Sbjct: 544 EIQVKYQGYIDRQNDEIAERKDIETMKLPADIDYAKVKGLSAEVQQKLNAHKPETLGQAS 603 Query: 597 KIEGMTPAALNLLLIYIKK 615 +I+G+TPA++ LL++++++ Sbjct: 604 RIQGITPASVALLMVHLRR 622 >gi|225848083|ref|YP_002728246.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Sulfurihydrogenibium azorense Az-Fu1] gi|225643777|gb|ACN98827.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Sulfurihydrogenibium azorense Az-Fu1] Length = 620 Score = 525 bits (1352), Expect = e-147, Method: Compositional matrix adjust. Identities = 291/625 (46%), Positives = 390/625 (62%), Gaps = 28/625 (4%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 + +DV+V+GGGHAG EAA ++AKLGA TALIT + IG M CNP+IGG+ KG +VRE+ Sbjct: 4 DTEFDVVVVGGGHAGIEAAIISAKLGAKTALITLDENKIGLMPCNPSIGGIAKGIVVREV 63 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G M + D GIQF+VLN +KGPAVR PR QAD+E YR M + + ENL VI+ Sbjct: 64 DALGGEMAKAIDQTGIQFKVLNTRKGPAVRSPRAQADKEEYRKYMVEKTHNTENLTVIED 123 Query: 123 EVAG--FNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 EV +N + ++ I+ +VV+TTGTFL G+IHIG + PAGRM + PS+ Sbjct: 124 EVVDIVLKPHQNEVEGVITDKGLKIKTKSVVITTGTFLNGLIHIGDKRFPAGRMEEKPSS 183 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI------T 234 L + + F+ R KTGTPARLD TI + E+ D FSF T+ Sbjct: 184 KLPEFYKRHGFELARFKTGTPARLDKNTINFSILEEAPGDNPPPKFSFWTEPKGSYWFKE 243 Query: 235 NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 QI C IT T ETHRII EN+ +A+Y G I GPRYCPSIEDKIV+F ++ H ++ Sbjct: 244 KDQIPCYITYTTPETHRIIRENLHRTALYGGAITGVGPRYCPSIEDKIVKFEGKDRHTVW 303 Query: 295 LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT 354 LEPE + +YPNG+ST+LPEEIQ Q R+IPGLE V +++P YAIEYD + P EL+PT Sbjct: 304 LEPETRDGISIYPNGLSTSLPEEIQWQMYRSIPGLENVVLLKPAYAIEYDIVMPTELYPT 363 Query: 355 LETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSA-RKSNKLDCICFSRTDSYIGVMID 413 LETKKI GL+ AG NGTTGYEEAA QG+VAGIN+A R K + R + YIGVMID Sbjct: 364 LETKKIKGLYHAGNFNGTTGYEEAAGQGIVAGINAALRALGKDEPFIIGRDEGYIGVMID 423 Query: 414 DLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNF 473 DLT+KGV+EPYR+FTSR+EYR+ LR DNA RL +G + E +EY F Sbjct: 424 DLTTKGVIEPYRLFTSRSEYRLHLRQDNAILRLYQKAYNIGALTE----------EEYRF 473 Query: 474 LRSL---LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS 530 ++ +K+ + T KN K + K + + FL P+ SI NL + S Sbjct: 474 VKQHEDEIKNWIETYKN-----TYIKDNDKKISVFTFLQKPEISIDNLKDYGIETPS-SD 527 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 + E ++I Y Y R+ +++K+ + IP+D DYS + L+ E KL+ KP Sbjct: 528 YIKEEVEINVKYDGYFERERKLNEKMKYLDSIKIPQDIDYSKVAGLTKEAVMKLTKAKPM 587 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 L A+++EG+TPAA+ ++++I+K Sbjct: 588 TLGHAARLEGITPAAITAIMVHIEK 612 >gi|219871649|ref|YP_002476024.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Haemophilus parasuis SH0165] gi|219691853|gb|ACL33076.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Haemophilus parasuis SH0165] Length = 603 Score = 525 bits (1352), Expect = e-147, Method: Compositional matrix adjust. Identities = 279/595 (46%), Positives = 367/595 (61%), Gaps = 5/595 (0%) Query: 27 LGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVK 86 +G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA+ GLM D AGIQFR LN Sbjct: 1 MGLKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKEIDAMGGLMATATDKAGIQFRTLNSS 60 Query: 87 KGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIR 146 KGPAVR R QADR LYR A++ + +Q NLD+ Q EV E N V + + Sbjct: 61 KGPAVRATRAQADRVLYRQAVRTALENQPNLDIFQQEVVDILVENNRAVGAVTKMGLTFK 120 Query: 147 CSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDG 206 +V+LT GTFL G IHIG GR GD + L + + RLKTGTP RLD Sbjct: 121 AKSVILTAGTFLAGKIHIGLDNYAGGRAGDPAATMLADRLRDLNLRVDRLKTGTPPRLDA 180 Query: 207 KTIIWDKTEKQFADERLIPFSFM-TDKITNRQIECGITRTNLETHRIIMENIKHSAIYSG 265 +TI +D KQ D+ L SFM + + RQI C IT TN +TH +I ++ S +Y+G Sbjct: 181 RTINFDVLAKQHGDDVLPVMSFMGSVEQHPRQIPCYITHTNEQTHDLIRNSLDRSPMYTG 240 Query: 266 DIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRT 325 I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL T VYPNGIST+LP ++Q + + Sbjct: 241 IIEGIGPRYCPSIEDKVMRFSDRNSHQIYLEPEGLTTIEVYPNGISTSLPFDVQIGIVNS 300 Query: 326 IPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVA 385 + GLE II+PGYAIEYDY +P++L PTLETK I GLF AGQINGTTGYEEAAAQGL+A Sbjct: 301 MKGLENTRIIKPGYAIEYDYFDPRDLKPTLETKAIDGLFFAGQINGTTGYEEAAAQGLLA 360 Query: 386 GINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNR 445 GIN+ + + +R +Y GV++DDL + G EPYR+FTSRAEYR+ LR DNAD R Sbjct: 361 GINAGLQVQGKEAWFPTRDLAYTGVLVDDLCTLGTKEPYRVFTSRAEYRLLLREDNADAR 420 Query: 446 LTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV--LTSKNLSSTSISFKQD-GKTR 502 LTPI + G I E R RF + ++ ++ LK L NL + + Sbjct: 421 LTPIAHQFGLIDEARWMRFNEKMENIEKEKARLKQTWAHLQMANLVEVNALLNSPLAREA 480 Query: 503 TAYEFLSYPDFSIQNLFSICPDARKFSSL-VIERLQIESSYAAYTGRQMIEAKEIKFEEK 561 + + + P+ + + L I P A E+++I Y Y Q E + K E Sbjct: 481 SGEDLIRRPEVTYEALTQIAPFAPAIEDKEAAEQVEISIKYQGYIEHQQQEIERHKRHEN 540 Query: 562 RLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKN 616 IP +FDY + +LSNE++ KL +P ++ QAS+I G+TPAA+++LL+ +KK Sbjct: 541 TQIPAEFDYDKVESLSNEVRAKLIQHRPVSIGQASRISGITPAAISILLVNLKKQ 595 >gi|153956502|ref|YP_001397267.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium kluyveri DSM 555] gi|219856805|ref|YP_002473927.1| hypothetical protein CKR_3462 [Clostridium kluyveri NBRC 12016] gi|189039335|sp|A5N450|MNMG_CLOK5 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|146349360|gb|EDK35896.1| GidA [Clostridium kluyveri DSM 555] gi|219570529|dbj|BAH08513.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 628 Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust. Identities = 273/621 (43%), Positives = 393/621 (63%), Gaps = 18/621 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAGCEA AA++G T + T +IG M CNP IGG KGHLVREIDAL Sbjct: 8 YDVIVIGAGHAGCEAGLAAARMGCRTLMCTMNLDSIGFMPCNPNIGGTAKGHLVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG DA IQ R+LN KGPAV R QAD+ Y M+ + Q NLD+ Q EV Sbjct: 68 GGEMGVNIDATFIQSRMLNTSKGPAVHSLRAQADKRNYSGRMKSVLERQHNLDLKQLEVV 127 Query: 126 GFNTE-KNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 G + + + ++ ++ + T+VL+TGT+L+G + IG + +G G P+N L Sbjct: 128 GIRIDNEGKVCGVITKNGAYFETKTIVLSTGTYLKGKVIIGDVSYSSGPNGFMPANDLSQ 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S + + R KTGTPAR++ +++ + K +Q D+R++PFSFM++ + +Q+ C +T Sbjct: 188 SLLDLGIEIRRFKTGTPARVNRRSVDFSKMIEQPGDKRIVPFSFMSENLDRKQVSCYLTY 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T T ++I ENI S +++G IKS GPRYCPSIEDKIVRF + HQIF+EPEG +T+ Sbjct: 248 TTENTTKVIRENINRSPLFNGSIKSVGPRYCPSIEDKIVRFPNKENHQIFIEPEGEDTNE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y +G ST++PE++Q RTI GLE V +R GYAIEYD INP +L PTLE KK+ GLF Sbjct: 308 LYVDGASTSMPEDVQIAMYRTIIGLENVEFLRTGYAIEYDCINPLQLRPTLEFKKVEGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ+NG++GYEEAA+QG++AGIN+A K + R+D+YIGV+IDDL +KG EPY Sbjct: 368 GAGQLNGSSGYEEAASQGIIAGINAALKVKGKEPFILKRSDAYIGVLIDDLVTKGTEEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSR+EYR+ LR DNAD RLT +G K+G + ++R+ KY++ N + + +K + Sbjct: 428 RMMTSRSEYRLILRQDNADLRLTEMGYKIGLV---TKERYDKYLERKNSIETEIKRI--- 481 Query: 485 SKNLSST----------SISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIE 534 KNL T S+ + K+ + YE + P+ L + D + + V E Sbjct: 482 -KNLYITPKKEVIEFLNSLGSSELKKSISLYELIKRPELDYFKLQLLDMDRPELNEDVQE 540 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 + I S Y Y +Q+ + ++ K E + IP++ DY + L E +KL ++P ++ Q Sbjct: 541 EVNIISKYEGYIKKQLEQVQQFKKFENKFIPENIDYDEIKGLRIEANQKLKKIRPISIGQ 600 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G++PA +++LL+Y++K Sbjct: 601 ASRISGVSPADISVLLVYLEK 621 >gi|220933187|ref|YP_002510095.1| glucose inhibited division protein A [Halothermothrix orenii H 168] gi|219994497|gb|ACL71100.1| glucose inhibited division protein A [Halothermothrix orenii H 168] Length = 628 Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust. Identities = 275/620 (44%), Positives = 383/620 (61%), Gaps = 14/620 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIG GHAG EA+ A++G +T + M CNP++GG GK H+VREID Sbjct: 6 KEYDVIVIGAGHAGSEASLAPARMGFKVLTMTVDLDHVAFMPCNPSLGGPGKSHIVREID 65 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M R D IQ R+LN KGPAVRG R QAD++ Y L M+R + + N+D+ Q Sbjct: 66 ALGGEMARNMDETMIQIRMLNTSKGPAVRGLRGQADKKQYHLRMKRVLEREPNVDLKQEI 125 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 E I ++ + + R V++TTGTFL+G I IG+ AG P+N L Sbjct: 126 AEKLVIEDGEIKGVITKTGILYRAKKVIVTTGTFLKGKIIIGEATFNAGPNQQYPANKLS 185 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 S K F R KTGTP R++ ++ + K ++Q D+ L FSF++ T Q+ C +T Sbjct: 186 ESLKKAGFKLRRFKTGTPPRVNKNSLDFSKMKEQTGDKGLT-FSFVSPPFTREQVSCWLT 244 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 T ETHRII EN + ++SGDI+ GPRYCPSIEDK+VRF ++ HQIFLEPEG TD Sbjct: 245 YTTDETHRIIQENKHRTPLFSGDIEGVGPRYCPSIEDKVVRFPHKDRHQIFLEPEGEFTD 304 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 Y G+S++LPE++Q +R+IPG+EK I+RP YAIEYD I+P +L TLE K I GL Sbjct: 305 EYYVAGLSSSLPEDVQIDLVRSIPGMEKAEIMRPAYAIEYDCIDPTQLKLTLEAKHIKGL 364 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 ++AGQINGT+GYEEAA QGL+AGIN++ D + R+++YIGV+ID+L +KG EP Sbjct: 365 YMAGQINGTSGYEEAAGQGLIAGINASLSLQGKDPLILKRSEAYIGVLIDELVTKGTNEP 424 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLTP G ++G I E R K+F K + + L+S + Sbjct: 425 YRIMTSRAEYRLILRQDNADQRLTPKGYEIGLISEERYKKFRKKVDKIEEALEFLRSNQI 484 Query: 484 TS--------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIER 535 + K L+S +S K T + L P ++L D ++ +IE+ Sbjct: 485 SPTPEVRERLKELNSGDLS-----KPVTLEQLLRRPQLEYRDLKYFVDDLPEYPDDIIEQ 539 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 + I+ Y Y RQM + ++ K E +LIP D DY L L E +EKL +KP +L QA Sbjct: 540 VSIQVKYKGYIDRQMSQIEQFKKMEDKLIPDDIDYQELENLRLEAREKLDKIKPRSLGQA 599 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G++PA +++L++Y+++ Sbjct: 600 SRISGVSPADISVLMVYLEQ 619 >gi|116514951|ref|YP_802580.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Buchnera aphidicola str. Cc (Cinara cedri)] gi|122285653|sp|Q058G2|MNMG_BUCCC RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|116256805|gb|ABJ90487.1| glucose inhibited division protein A [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 634 Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust. Identities = 293/613 (47%), Positives = 397/613 (64%), Gaps = 12/613 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D+IVIG GHAG EAA+ ++++G T LIT K STIG++SCNPAIGGLGK LV+EIDAL Sbjct: 7 FDIIVIGAGHAGTEAASASSRMGQKTLLITQKRSTIGTLSCNPAIGGLGKSQLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM +V D +GIQFR+LN KKG AVR R QADR LY+ M + +Q+NL + + EV+ Sbjct: 67 GGLMAKVIDYSGIQFRILNSKKGYAVRSTRAQADRFLYQKNMNYFLNNQKNLTIFEQEVS 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + + I+ D + + S V+LT GTFL G ++IG GR D ++ L N+ Sbjct: 127 DIIIKNYQVQGIITSDGKIFKSSIVILTAGTFLNGKMYIGSDVFDGGRRNDVSASILANN 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN--RQIECGIT 243 K+ GRLKTGTP RL K+I +D +KQ+ D FSF+ KI +Q+ C IT Sbjct: 187 LKKYFSKIGRLKTGTPPRLKKKSINFDILKKQYGDYPTPVFSFL-GKIEQHPKQVPCYIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II +N+ S +YSG I GPRYCPSIEDKI++F ++ HQIFLEPEG+N++ Sbjct: 246 YTNDHTHSIIKKNLHLSPLYSGSITGIGPRYCPSIEDKIIKFPDKISHQIFLEPEGINSE 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 ++YPNGIST+LP++IQ I++I GLE +I+ GYA+EYDY +P++L TLE+KKI L Sbjct: 306 IIYPNGISTSLPKDIQVDLIQSISGLENAHIVHSGYAVEYDYFDPRDLKMTLESKKIKNL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F+AGQINGTTGYEEAAAQGL+AG+N+A K D R ++YIGV+IDDL SKG EP Sbjct: 366 FMAGQINGTTGYEEAAAQGLIAGLNAALKIQCKDTWYPKRNEAYIGVLIDDLCSKGTSEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR +NAD RLT IG KLG I + R K F+K + R+ LK+++L Sbjct: 426 YRMFTSRAEYRLLLRENNADERLTTIGYKLGLIDDFRWKIFSKKQDSISRERNRLKNIIL 485 Query: 484 TSKNLSSTSISFKQD--GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVI------ER 535 K + +S + K K TA++ L P+ S +L K +VI E Sbjct: 486 QPKTVFFSSNNKKTIYLKKKCTAFDLLRRPEISYNDLILFLNSFLK-KKIVIKNKEITEE 544 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++ +S Y Y RQ E K+ K+ E + + DY + LSNE KL+ +P ++ QA Sbjct: 545 IETQSKYFGYIQRQEKEIKKYKYYENKKLYCIKDYREILGLSNEAIIKLNKYRPSSIGQA 604 Query: 596 SKIEGMTPAALNL 608 +I G+TP +++ Sbjct: 605 LRISGITPVTISI 617 >gi|78778117|ref|YP_394432.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Sulfurimonas denitrificans DSM 1251] gi|123549636|sp|Q30P84|MNMG_SULDN RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|78498657|gb|ABB45197.1| Glucose-inhibited division protein A subfamily [Sulfurimonas denitrificans DSM 1251] Length = 626 Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust. Identities = 277/617 (44%), Positives = 386/617 (62%), Gaps = 7/617 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVI+IGGGHAG EA+ +A++G T LI+ +G+ SCNPAIGGL KGHLVREIDA Sbjct: 2 NYDVIIIGGGHAGVEASLASARMGNKTLLISMLAENVGATSCNPAIGGLAKGHLVREIDA 61 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M + D AGIQFR+LN KGPAVRG R Q D + YR+ + +IL+ NL+++Q Sbjct: 62 LGGEMALITDEAGIQFRILNQTKGPAVRGSRAQIDMDRYRVIARNKILNTPNLELVQEMA 121 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + + V++T+GTFLRGVIH+G++K GR G+ S++L Sbjct: 122 ESLIIEDGEVKGVKTNLLNEYSAKRVIVTSGTFLRGVIHVGEIKQIGGRYGEQSSDALSA 181 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK----ITNRQIEC 240 S + GRLKTGT AR+D TI + E+Q DE PFSF T++ T +QI C Sbjct: 182 SLKSCGLEMGRLKTGTCARVDASTIDFSVMEEQGGDELPNPFSFRTNREEFRKTKKQIPC 241 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN TH II N + +++G I+ GPRYCPSIEDKI RF ++ H +F+EP+ L Sbjct: 242 YITYTNQNTHDIIESNFYRAPMFTGQIEGRGPRYCPSIEDKINRFRDKERHHLFIEPQTL 301 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 Y NG+ST+LP ++Q I ++ G+E I+R GYAIEYD+++P+EL TLETKKI Sbjct: 302 ENTECYINGMSTSLPPDVQQLMINSVKGMENAKIVRYGYAIEYDFVDPRELKHTLETKKI 361 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GL+LAGQINGTTGYEEAAAQGL+AGIN++ + R ++YIGV+IDDL +KG Sbjct: 362 KGLYLAGQINGTTGYEEAAAQGLMAGINASLSLQGKEPFILRRDEAYIGVLIDDLVTKGT 421 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF-AKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR ++AD RL+ G G I + +R AK Q R L + Sbjct: 422 KEPYRMFTSRAEYRLLLREESADTRLSHYGHTFGLIDDENYERVKAKEAQIQEGARILRE 481 Query: 480 SLVLTSKNLSSTSISFKQDG--KTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 ++ +K + S ++G T +A + ++ F + + + P+ + S +++ + Sbjct: 482 TIFTPNKEFIAFLNSIGEEGVRDTISAEQIVARKSFDVSKMLKLIPEFEMYESYILDEIL 541 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 +E YA Y +Q E +++K K IP++F + S+ LS E+ EKL P L AS+ Sbjct: 542 VEGKYARYVQKQSEEIQKMKKYLKVEIPQNFAFRSISGLSKEIVEKLESFNPPTLQAASQ 601 Query: 598 IEGMTPAALNLLLIYIK 614 I G+TPAA+ +L IYIK Sbjct: 602 ISGITPAAIEILHIYIK 618 >gi|225554736|gb|EEH03031.1| mitochondrial translation optimization protein [Ajellomyces capsulatus G186AR] Length = 699 Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust. Identities = 287/638 (44%), Positives = 394/638 (61%), Gaps = 25/638 (3%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDV+VIGGGHAG EA A AA+LGA TAL+T S IG SCNP+IGG+GKG ++REID Sbjct: 36 QAYDVVVIGGGHAGSEACAAAARLGARTALVTPSRSNIGVCSCNPSIGGIGKGTMIREID 95 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDG+ G+VAD AGIQFR+LN KG AV GPR Q DR LYR M E+ + L +++G+ Sbjct: 96 ALDGVAGKVADKAGIQFRILNRSKGEAVWGPRAQIDRVLYRQNMLDELSNTPGLSIVEGK 155 Query: 124 VAGFNTEKN--------IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMG 175 V K+ I + ++ +I V++TTGTFL G IHIG P+GR+G Sbjct: 156 VGDIIVSKDNLPAGSQGKIVGVRLESGEVIPTGRVIITTGTFLGGEIHIGLDVFPSGRLG 215 Query: 176 DSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT- 234 ++ + L S + F GRLKTGTP RLD KTI + E Q D IPFS++ +++ Sbjct: 216 EAATFGLSRSLREAGFQLGRLKTGTPPRLDKKTIDFSNLEVQPGDSPPIPFSYLNNRVDV 275 Query: 235 --NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQ 292 Q+ C T TN H+I+ +N+ S +K GPRYCPS+E KI+RF ++ H Sbjct: 276 DDEDQLPCWSTYTNEAAHQIVRDNLDKSIHIRETVK--GPRYCPSLESKIIRFKDKQRHM 333 Query: 293 IFLEPEGLNTD-VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKEL 351 I+LEPEG D V+YPNGIS +P + Q +RT+ GLE V +++ GY +EYDY++P+ L Sbjct: 334 IWLEPEGFEPDEVIYPNGISMTIPADAQLAMLRTVAGLENVRMLQAGYGVEYDYVDPRSL 393 Query: 352 FPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 PTLETK ISGL+LAGQINGTTGYEEAA QG++AGIN+ S SR+D +IG+M Sbjct: 394 RPTLETKLISGLYLAGQINGTTGYEEAAGQGILAGINAGLASKSKPPFTLSRSDGFIGIM 453 Query: 412 IDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEY 471 +DDL +KGV EPYRMFTSR+EYRIS R DNAD RLT G ++G +G++R + F++ + Sbjct: 454 VDDLITKGVSEPYRMFTSRSEYRISTRSDNADLRLTARGREVGVVGDKRWEHFSQVQAQI 513 Query: 472 NFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLF-SICP------- 523 L++LL++ S S D R+A++ L D SI ++ I P Sbjct: 514 TELQTLLENTKFPSALWSRKGFGVHYDNNVRSAFDLLRLRDISIDDIIPHIEPPSSSRSG 573 Query: 524 ---DARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNEL 580 A F+S + R+ +E YA Y + + +E L+P D DYS + LS E Sbjct: 574 KAYTASSFASEIKHRVAVEGRYAPYVKMHADRTRNFEKDEALLLPPDIDYSLITGLSAEE 633 Query: 581 KEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTV 618 + L ++P ++ A +IEGMTP A LL+Y+++ T Sbjct: 634 RAALEKVRPESIGMARRIEGMTPVAALKLLVYVRRTTA 671 >gi|193214573|ref|YP_001995772.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Chloroherpeton thalassium ATCC 35110] gi|193088050|gb|ACF13325.1| glucose inhibited division protein A [Chloroherpeton thalassium ATCC 35110] Length = 622 Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust. Identities = 275/620 (44%), Positives = 383/620 (61%), Gaps = 10/620 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAG EAA A++G LITH + + MSCNPAIGG+ KG + REIDAL Sbjct: 3 YDVIVVGAGHAGTEAAFAPARMGLKVLLITHDLTAMARMSCNPAIGGVAKGQITREIDAL 62 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M +V DA GIQFR+LN KG A+ PR QADR LY L M+R I ++ N+D+ + +V Sbjct: 63 GGEMAKVIDATGIQFRMLNRSKGAAMHSPRAQADRTLYSLDMRRRIEAESNIDLREDDVT 122 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGR-MGDSPSNSLFN 184 G TE ++V++ I + +LT GTFL G+IHIG AGR + + S L Sbjct: 123 GIRTENGAFKAVVLRSGLEIEGKSAILTNGTFLNGLIHIGLKHYDAGRTLAEPASRGLTE 182 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGIT 243 + F GRLKTGTP R+D +++ + K E Q DE PFSF T+ + R Q+ C IT Sbjct: 183 CLVNLGFSAGRLKTGTPPRIDARSVDYSKVETQTPDENPEPFSFETETLKGRPQVSCYIT 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 T+LETH+++ S +++G ++ GPRYCPSIEDK+ RF +++ HQIFLEPEG T+ Sbjct: 243 YTSLETHKVLETGFDESPMFTGRVQGIGPRYCPSIEDKVNRFRDKDRHQIFLEPEGFYTN 302 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y NG ST+LPE +Q + ++TI GLE V +IRPGYAIEYD+ +P +L TLETK + L Sbjct: 303 EMYVNGFSTSLPESVQLRGLKTISGLENVKMIRPGYAIEYDFFHPHQLKSTLETKLVEHL 362 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQIN T+GYEEAAAQGL+AGIN+A K + +R+++YIGV+IDDL +K + EP Sbjct: 363 YFAGQINATSGYEEAAAQGLMAGINAALKIQAKEPFILNRSEAYIGVLIDDLITKSIDEP 422 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+RI LR DNAD RL G +G +GE + F K E L + L Sbjct: 423 YRMFTSRAEHRIILRQDNADRRLREKGYAVGLVGEEVYQAFLKKKSEIERLHKFFEEKNL 482 Query: 484 TSKNLSS--TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDAR------KFSSLVIER 535 + +LS + + +T +++ P+ L C R + V E+ Sbjct: 483 SPDDLSGYYDTTGLEPVLRTLKLKDWIRRPNQDFHRLLEQCETLRGEVEQISQNPKVYEQ 542 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 + I+ Y Y R+M A+++ E IP+ F+Y + LS E +EKL P +L QA Sbjct: 543 VIIDIKYEGYIRREMQLAEKMMRLENVEIPQKFNYDLIKGLSTEGREKLKKFSPISLGQA 602 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G++PA +++LL+ + + Sbjct: 603 SRISGVSPADVSILLVRLGR 622 >gi|229524904|ref|ZP_04414309.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae bv. albensis VL426] gi|229338485|gb|EEO03502.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae bv. albensis VL426] Length = 631 Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust. Identities = 281/626 (44%), Positives = 384/626 (61%), Gaps = 15/626 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA AA+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHETFDVIVVGGGHAGTEAALAAARTGQRTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRNVLENTPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V + + I +V Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQAVDDVIVDNDHIRGVVTQMGLKFHAKAVVLTVGTFLGGKIHIGLENYAGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D ++ + E Q D FSFM + + RQI Sbjct: 182 ALAHRLRELPFRVDRLKTGTPPRIDANSVDFSVLEAQHGDNPTPVFSFMGKREHHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +++ HQIF+EPEG Sbjct: 242 CYITHTNERTHDVIRANLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADKDSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTTELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 IHGLFFAGQINGTTGYEEAAAQGLMAGLNASLYSQDKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG + + R RF + I R L+ Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLVDDARWARFNQKIDNMAKERQRLQ 481 Query: 480 SLVLTSKN--------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL 531 + + L T +S + G+ + L P+ + + L ++ Sbjct: 482 ETWMNPNSVGVEQLNTLLKTPMSREASGE-----DLLRRPEMTYELLTTLPAFTPALEDA 536 Query: 532 -VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 E+++I+ Y Y RQ E ++ E +P + DY + LSNE+ KL+ KP Sbjct: 537 EAAEQVEIQVKYDGYIQRQQDEIEKSLRHEHTKLPAELDYKQVKGLSNEVVLKLNAAKPE 596 Query: 591 NLLQASKIEGMTPAALNLLLIYIKKN 616 + AS+I G+TPAA+++LL+++KK+ Sbjct: 597 TIGIASRISGITPAAISILLVHLKKH 622 >gi|229515958|ref|ZP_04405415.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae TMA 21] gi|229347058|gb|EEO12020.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae TMA 21] Length = 631 Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust. Identities = 282/626 (45%), Positives = 383/626 (61%), Gaps = 15/626 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA AA+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHETFDVIVVGGGHAGTEAALAAARTGQRTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D GIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAQAIDHTGIQFRTLNASKGPAVRATRAQADRALYKAYVRNVLENTPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + I +V Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQAVDDVIVEHDHIRGVVTQMGLKFHAKAVVLTVGTFLGGKIHIGLENYAGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D ++ + E Q D FSFM + + RQI Sbjct: 182 ALAHRLRELPFRVDRLKTGTPPRIDANSVDFSVLEAQHGDNPTPVFSFMGKREHHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +++ HQIF+EPEG Sbjct: 242 CYITHTNERTHDVIRANLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADKDSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTTELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 IHGLFFAGQINGTTGYEEAAAQGLMAGLNASLYSQDKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG + + R RF + I R L+ Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLVDDARWVRFNQKIDNMAKERQRLQ 481 Query: 480 SLVLTSKN--------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL 531 + + L T +S + G+ + L P+ + L ++ A Sbjct: 482 ETWMNPNSVGVEQLNTLLKTPMSREASGE-----DLLRRPEMTYDLLTTLPAFAPALEDA 536 Query: 532 -VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 E+++I+ Y Y RQ E ++ E +P + DY + LSNE+ KL+ KP Sbjct: 537 EAAEQVEIQVKYDGYIQRQQDEIEKSLRHEHTKLPAELDYKQVKGLSNEVVLKLNAAKPE 596 Query: 591 NLLQASKIEGMTPAALNLLLIYIKKN 616 + AS+I G+TPAA+++LL+++KK+ Sbjct: 597 TIGIASRISGITPAAISILLVHLKKH 622 >gi|258405986|ref|YP_003198728.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Desulfohalobium retbaense DSM 5692] gi|257798213|gb|ACV69150.1| glucose inhibited division protein A [Desulfohalobium retbaense DSM 5692] Length = 626 Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust. Identities = 278/615 (45%), Positives = 378/615 (61%), Gaps = 3/615 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+GGGHAGCEAA AA++G ST L+T +G +SCNPAIGGL KGH+V+EIDA Sbjct: 9 TFDVIVVGGGHAGCEAAMAAARMGLSTLLLTINIDRLGHLSCNPAIGGLAKGHMVKEIDA 68 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG AD AGIQFR+LN +KGPAVR R Q DR Y +QR++ +Q+NL + + Sbjct: 69 LGGRMGLWADQAGIQFRILNTRKGPAVRATRAQMDRATYMRVVQRDLFAQDNLWIKEATA 128 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E I + + R + V+LTTGTFL G IHIG GR+GD +N+L Sbjct: 129 QEILAENGSIKGVRTHLEEIHRSANVILTTGTFLTGRIHIGLNNFAGGRLGDPAANALSE 188 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S D RLKTGT RL ++ + + Q D+ PFSF + + Q+ C IT Sbjct: 189 SMRGLGLDLARLKTGTVPRLLRDSVDFAQMTPQPGDDPPPPFSFHSPGVQLPQLPCHITY 248 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH I E S ++ G I G RYCPSIEDK+ RF +++ HQ+F+EPEGL+ Sbjct: 249 TNAATHDSIREGFDRSPMFQGVITGTGARYCPSIEDKVARFPDKDRHQLFVEPEGLDNPE 308 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGI T+LP +IQ + + TIPGLE+ I+RPGYAIEYD++ P +L P+LETK ++GLF Sbjct: 309 VYPNGIPTSLPLDIQKKLLATIPGLEQAQIVRPGYAIEYDFVPPTQLKPSLETKAVAGLF 368 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAAAQGL A IN R+ + R +Y+GV++DDL +KG EPY Sbjct: 369 CAGQINGTSGYEEAAAQGLWAAINVLRRHQERAPWILGRDQAYMGVLVDDLVTKGTQEPY 428 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAE+R+ LR DNAD RLTP+G +LG + + + + +Q + L S L+ ++ Sbjct: 429 RMFTSRAEHRLLLREDNADQRLTPLGRELGLVDDSHWEIYQSKMQALDSLLSRLEETIIK 488 Query: 485 SKNLSST---SISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 SI GK + L P I++L + P R V+++ +++S Sbjct: 489 PDATVREKLHSIGAAVPGKPASLGTLLRQPQLHIRDLEVVAPGLRDLPGHVLDQAEVQSK 548 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y RQ + + +E +P+D Y ++P LS E+ EKL ++P L QA +I G+ Sbjct: 549 YQGYLARQQEMVQRSQRQENIALPEDMAYETIPGLSREVVEKLQTIRPRTLGQAGRISGI 608 Query: 602 TPAALNLLLIYIKKN 616 TPAAL+ L I +KK Sbjct: 609 TPAALSCLEIALKKQ 623 >gi|309379098|emb|CBX22229.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 631 Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust. Identities = 286/621 (46%), Positives = 389/621 (62%), Gaps = 12/621 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 8 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 67 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY+ A++ + +QENLD+ Q Sbjct: 68 ALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKAAIREMLENQENLDLFQQA 127 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + IS ++ + VVLT GTFL G IHIG GR GD + SL Sbjct: 128 VEDVTLDGERISGVITAMGVEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 187 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT----DKITNRQIE 239 + GRLKTGTP R+DG+TI + + +Q D P M+ ++ RQ+ Sbjct: 188 GRLRELKLPQGRLKTGTPPRIDGRTIDFSQLTEQPGD---TPVPIMSVRGSAEMHPRQVS 244 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEG Sbjct: 245 CWITHTNTQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEG 304 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 305 LTTHEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKT 364 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG N+ + + D + R +Y+GV++DDL +KG Sbjct: 365 IEGLFFAGQINGTTGYEEAAAQGLLAGANAVQYVREQDPLLLRREQAYLGVLVDDLITKG 424 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 V EPYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + + LK Sbjct: 425 VNEPYRMFTSRAEYRLQLREDNADMRLTEDGCKIGLVGEAQWRMFNEKREAVEREIQRLK 484 Query: 480 SLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI--CPDARKFSSLVIE 534 + T + L+ + ++ + ++ L P+ L ++ + + ++ VIE Sbjct: 485 TTWYTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGAMPSERLAAEVIE 544 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E + E +P D DY + LS E+++KL+ KP + Q Sbjct: 545 QVEIQVKYQGYIDRQNEEIDSRRDIETLKLPDDIDYGKVKGLSAEVQQKLNQHKPETVGQ 604 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G+TPAA+ LL++++K+ Sbjct: 605 ASRISGVTPAAVALLMVHLKR 625 >gi|322711940|gb|EFZ03513.1| vacuolar protein sorting-associated protein 45 [Metarhizium anisopliae ARSEF 23] Length = 1151 Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust. Identities = 284/630 (45%), Positives = 396/630 (62%), Gaps = 19/630 (3%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R +DVIVIGGGHAG EA A AA+ GA TAL+T K IG+ SCNP+ GG+GKG ++REID Sbjct: 519 RPFDVIVIGGGHAGAEACAAAARTGAKTALVTPKIDNIGTCSCNPSFGGIGKGTIIREID 578 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDGL G++ D AG+QF +LN KGPA GPR Q DR+LY+ M+ E+ S NL ++ Sbjct: 579 ALDGLAGKIIDKAGVQFHMLNRSKGPA--GPRAQIDRKLYKQYMREELESYPNLSIVLAS 636 Query: 124 VAGFNTEK----------NIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGR 173 V+ K I+ + + ++ + V++TTGTFL G IHIG PAGR Sbjct: 637 VSDIILSKLDPPQALGASKSIAGVRLDSGQVLPSNKVIITTGTFLGGEIHIGLQSYPAGR 696 Query: 174 MGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI 233 +G++ + L S F GRLKTGTP RLD KTI + + E Q+ D PFSF+ + + Sbjct: 697 LGEAATFGLSKSLRTAGFQLGRLKTGTPPRLDQKTIDFKELEVQYGDTPPTPFSFLNNAV 756 Query: 234 T-NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQ 292 + Q+ C IT T THRI+ EN++++ IK GPRYCPS+E K++RF ++ H Sbjct: 757 SVADQLTCSITHTTDATHRIVRENLQNTVHIRETIK--GPRYCPSLESKVLRFPDKERHI 814 Query: 293 IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF 352 ++LEPEG + +VYPNG+S +P E Q Q +RTI GLE+V +++PGY +EYDYI+P+ L Sbjct: 815 VWLEPEGFESQIVYPNGLSMTIPPEAQKQALRTIKGLERVEMLQPGYGVEYDYIDPRGLK 874 Query: 353 PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMI 412 TLET+ I GL+LAGQINGTTGYEEAA QG++AGIN+ R + L + SR+D YIG+MI Sbjct: 875 STLETRAIHGLYLAGQINGTTGYEEAAGQGVMAGINAGRVAQGLSEVSISRSDGYIGIMI 934 Query: 413 DDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYN 472 DDL +KGV EPYRMFTSR+E+R++ R DNAD RLT G G + + R K F+ Q+ + Sbjct: 935 DDLITKGVTEPYRMFTSRSEFRMAARADNADLRLTEKGRDWGVVSDSRWKAFSDERQQID 994 Query: 473 FLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPD----FSIQNLFSICPDARKF 528 L +L S+ LTS S K++ RT + L + +Q L + P+ + + Sbjct: 995 DLTKILNSVSLTSTQWSEQGWHLKKNSPRRTGIDILRLSNTGTRVDLQQLSTSIPEIKSY 1054 Query: 529 SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 S+ V +R+ IE+ YA Y Q E ++E +P D +Y ++P L+ KE L Sbjct: 1055 STRVRDRVAIEAVYAPYVRMQAAERGRFAYDESVRLPLDINYDAIPGLALSEKELLKAAC 1114 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIKKNTV 618 P L QA ++EG+TPA LL +I++ ++ Sbjct: 1115 PETLAQARRVEGVTPAGTVRLLAHIRQRSL 1144 >gi|225076367|ref|ZP_03719566.1| hypothetical protein NEIFLAOT_01411 [Neisseria flavescens NRL30031/H210] gi|224952310|gb|EEG33519.1| hypothetical protein NEIFLAOT_01411 [Neisseria flavescens NRL30031/H210] Length = 631 Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust. Identities = 286/621 (46%), Positives = 390/621 (62%), Gaps = 12/621 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L++H T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 8 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLSHNIETLGQMSCNPSIGGIGKGHLVRELD 67 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY+ A++ + +QENLD+ Q Sbjct: 68 ALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKAAIREMLENQENLDLFQQA 127 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + IS +V + VVLT GTFL G IHIG GR GD + SL Sbjct: 128 VEDVTLDGERISGVVTAMGVEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 187 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT----DKITNRQIE 239 + + GRLKTGTP R+DG+TI + + +Q D P M+ ++ RQ+ Sbjct: 188 GRLRELNLPQGRLKTGTPPRIDGRTIDFSQLTEQPGD---TPVPVMSVRGSAEMHPRQVS 244 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TNL+TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEG Sbjct: 245 CWITHTNLKTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEG 304 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T+ YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 305 LTTNEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKT 364 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG N+ + D + R +Y+GV++DDL +KG Sbjct: 365 IQGLFFAGQINGTTGYEEAAAQGLLAGANAVQYVRGQDPLLLRREQAYLGVLVDDLITKG 424 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 V EPYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + + LK Sbjct: 425 VNEPYRMFTSRAEYRLQLREDNADMRLTEDGYKIGLVGEEQWRMFNEKREAVEREIQRLK 484 Query: 480 SLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI--CPDARKFSSLVIE 534 + T + L+ + ++ + ++ L P+ L ++ + + S+ V+E Sbjct: 485 TTWYTPQKLAEEEQLRVFGQKLSREANLHDLLRRPNLDYAALMTLEGAMPSERLSAEVVE 544 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E + E +P DY + LS E+++KL+ KP + Q Sbjct: 545 QVEIQVKYQGYIDRQNEEIDSRRDIETLKLPDGIDYGKVKGLSAEVQQKLNQHKPETVGQ 604 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G+TPAA+ LL++++K+ Sbjct: 605 ASRISGVTPAAVALLMVHLKR 625 >gi|242279069|ref|YP_002991198.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Desulfovibrio salexigens DSM 2638] gi|242121963|gb|ACS79659.1| glucose inhibited division protein A [Desulfovibrio salexigens DSM 2638] Length = 627 Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust. Identities = 278/613 (45%), Positives = 376/613 (61%), Gaps = 3/613 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D+IV G GHAGCEAA AA LG T L+T IG +SCNPAIGGL KGH+V+EIDAL Sbjct: 11 FDLIVAGAGHAGCEAAMAAANLGLKTLLLTINVDRIGHLSCNPAIGGLAKGHMVKEIDAL 70 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG +D AGIQFR+LN +KGPAVR R Q DR Y +Q++I SQ+NL V Q Sbjct: 71 GGCMGIWSDKAGIQFRILNTRKGPAVRASRAQMDRNEYMRVVQKDIFSQDNLWVRQAMAE 130 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + +V Q +V+LTTGTFL+G++HIG GRMGD S + S Sbjct: 131 SLIVEDGKAAGVVTQIGEKFHARSVMLTTGTFLQGLMHIGLENFSGGRMGDPASVGMSKS 190 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 GRLKTGT RL +I +DK E+Q D+ PFSF T +I+ Q+ C IT T Sbjct: 191 LKDAGLTLGRLKTGTTPRLLKDSIDYDKLEEQRGDDPPQPFSFRTKEISLPQVSCHITYT 250 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N + H I + S +++G IK G RYCPSIEDK+ RF E++ HQIFLEPEG ++ V Sbjct: 251 NEKAHEAIRSGFERSPMFTGVIKGTGARYCPSIEDKVARFPEKDRHQIFLEPEGYDSPEV 310 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YP+GI T+LP ++Q + I +I GLE+ I+RPGYAIEYD++ P +L PTLETK + GL+L Sbjct: 311 YPSGIPTSLPLDVQKRMIHSIEGLEQAQIVRPGYAIEYDFVPPTQLLPTLETKVLPGLYL 370 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGT+GYEEAAAQGL A N+ K D SR +YI V++DDL +KG LEPYR Sbjct: 371 AGQINGTSGYEEAAAQGLWAACNAFCKLTGRDPFLLSRDQAYIAVLVDDLVTKGTLEPYR 430 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAEYR+ LR NAD RLT IG +LG + + ++ + + + +++ S + Sbjct: 431 MFTSRAEYRLLLREGNADLRLTEIGRELGLVKDDHWALYSAKKKGLDEVLAMMNSTQIKP 490 Query: 486 KNLSS---TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSY 542 + T I K+ L P+ SI ++ P+ ++ +I + + Y Sbjct: 491 DQPTREIITKIGGTVPNKSVPLAAVLRQPELSITDMIHFKPEIENYADDIIAEAETQIKY 550 Query: 543 AAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMT 602 Y RQ + + E +P+D DYS++ L+ E EKL+ ++P L QAS+I G+T Sbjct: 551 EGYLVRQQELVDKFRKMESVSLPEDIDYSAVAGLTREAVEKLTEVRPLTLGQASRISGIT 610 Query: 603 PAALNLLLIYIKK 615 PAA++ + I++KK Sbjct: 611 PAAVSSIEIHLKK 623 >gi|15605227|ref|NP_220013.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Chlamydia trachomatis D/UW-3/CX] gi|237802927|ref|YP_002888121.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Chlamydia trachomatis B/Jali20/OT] gi|237804849|ref|YP_002889003.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Chlamydia trachomatis B/TZ1A828/OT] gi|288561914|sp|P0CD73|MNMG_CHLTR RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|3328935|gb|AAC68099.1| FAD-dependent oxidoreductase [Chlamydia trachomatis D/UW-3/CX] gi|231273149|emb|CAX10062.1| tRNA uridine 5-carboxymethylase [Chlamydia trachomatis B/TZ1A828/OT] gi|231274161|emb|CAX10955.1| tRNA uridine 5-carboxymethylase [Chlamydia trachomatis B/Jali20/OT] gi|296436959|gb|ADH19129.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Chlamydia trachomatis G/11222] Length = 610 Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust. Identities = 278/615 (45%), Positives = 379/615 (61%), Gaps = 18/615 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAGCEAA AAK+GAS L+T TI +SCNPA+GG+GKGH+VREIDAL Sbjct: 8 YDVIVIGAGHAGCEAAYCAAKMGASVLLLTSNLDTIAKLSCNPAVGGIGKGHIVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+M + D +GIQFR+LN KGPAVR PR Q D++LY + M+R + L ++QG Sbjct: 68 GGIMAEITDLSGIQFRILNQTKGPAVRAPRAQVDKQLYHIHMKRLLEQVPGLHIMQGTAE 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + + ++ TVVL++GTF+RG+IHIG GR+GD+ S L Sbjct: 128 ALLDNGEKVLGVSTKEGWAYLGKTVVLSSGTFMRGLIHIGTQNFSGGRLGDAASLGLSED 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI--TNRQIECGIT 243 + F GRLKTGTPARL +I + E+Q D + F + T Q+ C IT Sbjct: 188 LKRLGFPLGRLKTGTPARLLASSIDFSVMEEQPGDHN-VCFVHRNEMFVPTLPQVSCHIT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 T +T +I +N+ SA+Y G I+ GPRYCPSIEDKIV+F +++ H IF+EPEGLNT Sbjct: 247 HTTDQTKDLITKNLHRSALYGGRIEGVGPRYCPSIEDKIVKFADKDRHHIFIEPEGLNTQ 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY NG+ST++P ++Q+ IR++ GLE I RP YAIEYDY++ +FP+LE+K I GL Sbjct: 307 EVYVNGLSTSMPFDVQYDIIRSVSGLENAIITRPAYAIEYDYVHGNVIFPSLESKLIEGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 FL GQINGTTGYEEAAAQGL+AG+N+ K + SR +SYIGVM+DDLT++ + EP Sbjct: 367 FLCGQINGTTGYEEAAAQGLIAGVNAVNKVLRHPPFVPSRQESYIGVMLDDLTTQVLDEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R+ LR DNA RL+ G LG + R F + K+ + Sbjct: 427 YRMFTSRAEHRLLLRQDNAGMRLSHYGHSLGLLSSERYAMFQEQ-----------KACIE 475 Query: 484 TSKNLSSTSISFKQDGKTRTAY-EFLSYPDFSIQNLFSICP-DARKFSSLVIERLQIESS 541 K S +F++ G T + L P+ S Q L + P D R +V L++E Sbjct: 476 QEKE--RLSKTFRKYGDTVVPLTKVLCRPEVSYQQLLTEFPADVRDLGPVVGASLEMEIK 533 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y+ Y RQ + ++ E IP+D DY S+ ALS E +EKLS P + A++I G+ Sbjct: 534 YSGYISRQQTLIRSMERSENISIPEDIDYHSISALSLEAREKLSKFTPRTIGSAARISGI 593 Query: 602 TPAALNLLLIYIKKN 616 + A + +L++ +KK+ Sbjct: 594 SVADIQVLMVSLKKD 608 >gi|322700186|gb|EFY91942.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Metarhizium acridum CQMa 102] Length = 689 Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust. Identities = 282/627 (44%), Positives = 390/627 (62%), Gaps = 17/627 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R +DVIVIGGGHAG EA A AA+ GA TAL+T K G+ SCNP+ GG+GKG ++REID Sbjct: 55 RPFDVIVIGGGHAGAEACAAAARTGAKTALVTPKIDNFGTCSCNPSFGGIGKGTIIREID 114 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDGL GR+ D AG+QF +LN KGPAV GPR Q DR+LY+ M+ E+ S NL ++ Sbjct: 115 ALDGLAGRIIDKAGVQFHMLNRSKGPAVWGPRAQIDRKLYKQYMREELQSYPNLSIVLAS 174 Query: 124 VAGFNTEK----------NIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGR 173 V+ K ++ + + ++ S V++TTGTFL G IHIG PAGR Sbjct: 175 VSDIILSKLDPPQAEAASKCVAGVRLDSGQVLPSSKVIITTGTFLGGEIHIGLQSYPAGR 234 Query: 174 MGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI 233 +G++ + L S F GRLKTGTP RLD KTI + E Q+ D PFSF+ + + Sbjct: 235 LGEAATFGLSKSLRTAGFQLGRLKTGTPPRLDQKTIDFKGLEVQYGDAPPTPFSFLNNAV 294 Query: 234 T-NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQ 292 + Q+ C IT T THRI+ EN++++ IK GPRYCPS+E K++RF ++ H Sbjct: 295 SVADQLTCSITHTTDATHRIVRENLQNTVHIRETIK--GPRYCPSLESKVLRFPDKERHI 352 Query: 293 IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF 352 ++LEPEG + +VYPNG+S +P E Q Q +RTI GLE+V +++PGY +EYDYI+P+ L Sbjct: 353 VWLEPEGFESQIVYPNGLSMTIPPEAQKQALRTIKGLERVEMLQPGYGVEYDYIDPRGLK 412 Query: 353 PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMI 412 TLET+ + GL+LAGQINGTTGYEEAA QG++AGIN+ R + L + SR+D YIG+MI Sbjct: 413 STLETRALHGLYLAGQINGTTGYEEAAGQGVIAGINAGRVAQGLSEVSISRSDGYIGIMI 472 Query: 413 DDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYN 472 DDL +KGV EPYRMFTSR+E+R++ R DNAD RLT G G + + R + F+ Q+ + Sbjct: 473 DDLITKGVTEPYRMFTSRSEFRMAARADNADLRLTEKGRDWGVVSDSRWRAFSDERQQID 532 Query: 473 FLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPD----FSIQNLFSICPDARKF 528 L +L S+ LTS S K++ RT + L + +Q L + P+ + Sbjct: 533 DLTKILNSVSLTSTQWSEQGFHLKKNSSRRTGIDILRLSNTGNKIDLQQLSTSIPEIESY 592 Query: 529 SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 + V +R+ IE+ YA Y Q E ++E +P D +Y +P L+ KE L Sbjct: 593 PTRVRDRVAIEAVYAPYIRMQAAERGRFAYDESVRLPLDINYDVIPGLALSEKEVLKAAC 652 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIKK 615 P L QA ++EG+TPA LL +I++ Sbjct: 653 PETLAQARRVEGVTPAGTVRLLAHIRQ 679 >gi|311070642|ref|YP_003975565.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus atrophaeus 1942] gi|310871159|gb|ADP34634.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus atrophaeus 1942] Length = 628 Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust. Identities = 275/618 (44%), Positives = 383/618 (61%), Gaps = 7/618 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAG EAA +A+ GA T ++T + M CNP++GG KG +VREIDAL Sbjct: 8 YDVIVIGAGHAGVEAALASARQGAKTLVLTINLDMVAFMPCNPSVGGPAKGIVVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M R D IQ R+LN KGPAVR R QAD+ Y+ M+ + + NL ++QG Sbjct: 68 GGEMARNIDKTHIQMRMLNTGKGPAVRALRAQADKFQYQHEMKNTLEKEPNLTLLQGIAE 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E +V Q + R VVLTTGT+LRG I +G L +G PS L Sbjct: 128 RLIIEDGECRGVVTQTGAHYRSKAVVLTTGTYLRGRIILGDLSYSSGPNNQQPSIKLSEH 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + FD R KTGTP R+ G +I + KTE Q DE FS+ T + Q+ C +T T Sbjct: 188 LEELGFDLVRFKTGTPPRVKGDSIDYSKTEIQPGDEVPRAFSYETVEYITDQLPCWLTYT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 + ETH II N+ S +YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT V Sbjct: 248 SPETHEIIDNNLHRSPMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQEV 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+ST+LPE++Q + + TIPGLEKV ++R GYAIEYD I P +L+PTLETKKIS LF Sbjct: 308 YVQGLSTSLPEDVQQRMLSTIPGLEKVQMMRAGYAIEYDAIVPTQLWPTLETKKISNLFT 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGT+GYEEAA QG++AGIN+ RK+ + + SR+D+YIGV+IDDL +KG EPYR Sbjct: 368 AGQINGTSGYEEAAGQGIMAGINAGRKALDREEVILSRSDAYIGVLIDDLVTKGTNEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL-- 483 + TSRAEYR+ LR DNAD RLT IG ++G I + R + F + L S+++ Sbjct: 428 LLTSRAEYRLLLRHDNADLRLTEIGHRIGLISDERFQSFQTKKAAIEAEKKRLYSVIIKP 487 Query: 484 ---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 K + S S +DG T + + P+ + +++ + P + V E+++I+ Sbjct: 488 SEENQKYIRSLGGSELKDGVRGT--DLMKRPEMNYESVTKLAPAETPVAPEVAEQVEIQV 545 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y + + + +++K E + IP DY ++ ++ E ++KL ++P ++ QAS+I G Sbjct: 546 KYEGYIEKSLQQVEKLKKMENKKIPDRIDYDAIKGIATEARQKLKEVRPLSVAQASRISG 605 Query: 601 MTPAALNLLLIYIKKNTV 618 + PA +++LL+Y+++ + Sbjct: 606 VNPADISILLVYLEQGRI 623 >gi|255311316|ref|ZP_05353886.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Chlamydia trachomatis 6276] gi|255317617|ref|ZP_05358863.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Chlamydia trachomatis 6276s] gi|296436031|gb|ADH18205.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Chlamydia trachomatis G/9768] gi|296437892|gb|ADH20053.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Chlamydia trachomatis G/11074] gi|297140392|gb|ADH97150.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Chlamydia trachomatis G/9301] Length = 610 Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust. Identities = 278/615 (45%), Positives = 379/615 (61%), Gaps = 18/615 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAGCEAA AAK+GAS L+T TI +SCNPA+GG+GKGH+VREIDAL Sbjct: 8 YDVIVIGAGHAGCEAAYCAAKMGASVLLLTSNLDTIAKLSCNPAVGGIGKGHIVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+M + D +GIQFR+LN KGPAVR PR Q D++LY + M+R + L ++QG Sbjct: 68 GGIMAEITDLSGIQFRILNQTKGPAVRAPRAQVDKQLYHIHMKRLLEQVPGLHIMQGTAE 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + + ++ TVVL++GTF+RG+IHIG GR+GD+ S L Sbjct: 128 ALLDNGEKVLGVSTKEGWAYLGKTVVLSSGTFMRGLIHIGTQNFSGGRLGDAASLGLSED 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI--TNRQIECGIT 243 + F GRLKTGTPARL +I + E+Q D + F + T Q+ C IT Sbjct: 188 LKRLGFPLGRLKTGTPARLLASSIDFSVMEEQPGDHN-VCFVHRNEMFVPTLPQVSCHIT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 T +T +I +N+ SA+Y G I+ GPRYCPSIEDKIV+F +++ H IF+EPEGLNT Sbjct: 247 HTTDQTKDLITKNLHRSALYGGRIEGVGPRYCPSIEDKIVKFADKDRHHIFVEPEGLNTQ 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY NG+ST++P ++Q+ IR++ GLE I RP YAIEYDY++ +FP+LE+K I GL Sbjct: 307 EVYVNGLSTSMPFDVQYDIIRSVSGLENAIITRPAYAIEYDYVHGNVIFPSLESKLIEGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 FL GQINGTTGYEEAAAQGL+AG+N+ K + SR +SYIGVM+DDLT++ + EP Sbjct: 367 FLCGQINGTTGYEEAAAQGLIAGVNAVNKVLRHPPFVPSRQESYIGVMLDDLTTQVLDEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R+ LR DNA RL+ G LG + R F + K+ + Sbjct: 427 YRMFTSRAEHRLLLRQDNAGMRLSHYGHSLGLLSSERYAMFQEQ-----------KACIE 475 Query: 484 TSKNLSSTSISFKQDGKTRTAY-EFLSYPDFSIQNLFSICP-DARKFSSLVIERLQIESS 541 K S +F++ G T + L P+ S Q L + P D R +V L++E Sbjct: 476 QEKE--RLSKTFRKYGDTVVPLTKVLCRPEVSYQQLLTEFPADVRDLGPVVGASLEMEIK 533 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y+ Y RQ + ++ E IP+D DY S+ ALS E +EKLS P + A++I G+ Sbjct: 534 YSGYISRQQTLIRSMERSENISIPEDIDYHSISALSLEAREKLSKFTPRTIGSAARISGI 593 Query: 602 TPAALNLLLIYIKKN 616 + A + +L++ +KK+ Sbjct: 594 SVADIQVLMVSLKKD 608 >gi|157136155|ref|XP_001663678.1| glucose inhibited division protein a [Aedes aegypti] gi|108870028|gb|EAT34253.1| glucose inhibited division protein a [Aedes aegypti] Length = 644 Score = 523 bits (1348), Expect = e-146, Method: Compositional matrix adjust. Identities = 278/634 (43%), Positives = 410/634 (64%), Gaps = 33/634 (5%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+V+GGGHAG EA + AA++GA T LITHK STIG MSCNP+ GG+GKGHL+RE+DAL Sbjct: 15 YDVVVVGGGHAGTEACSAAARMGARTLLITHKRSTIGEMSCNPSFGGIGKGHLMREVDAL 74 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DG+ R D +G+Q++VLN ++GPAV GPR Q DR+LY+ +Q+E+ NL++++ V Sbjct: 75 DGVCARSCDNSGVQYKVLNKRRGPAVWGPRAQIDRKLYKAEVQKELSETANLEIVEASVE 134 Query: 126 GFNTEK------NIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 E+ N I I +++ ++ ++V+TTGTFLRG I+IG +PAGR+GD P+ Sbjct: 135 DIILEREEGQSLNRIKGISLKNGDVVWTKSLVITTGTFLRGQINIGLKTMPAGRIGDEPA 194 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI---TNR 236 L S F RLKTGTP R+ +I +D E+ D +PFSFM D++ Sbjct: 195 IGLAKSLEDLGFRMSRLKTGTPPRIKASSINFDILERHPGDNPPVPFSFMNDRVWLNNED 254 Query: 237 QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLE 296 Q++C +T T+ + + I+ N+ + + ++ GPRYCPSIE K++RFG + HQI+LE Sbjct: 255 QLDCFLTHTSADVNDIVKRNLHCNRHVTEELT--GPRYCPSIESKVLRFGGKT-HQIWLE 311 Query: 297 PEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLE 356 PEG +++++YPNG+S LPEE Q + +R + GLE+ + RPGY +EYD+++P+EL+ TLE Sbjct: 312 PEGFDSELIYPNGLSCTLPEEEQIKLVRCLRGLEEAELARPGYGVEYDFVDPRELYQTLE 371 Query: 357 TKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 TK+ GLF AGQINGTTGYEEA AQG++AG N+A K+ K + SRT+ Y+GV++DDLT Sbjct: 372 TKRADGLFFAGQINGTTGYEEAGAQGILAGANAAAKTLKRKPLTISRTEGYLGVLVDDLT 431 Query: 417 SKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRS 476 + G EPYRMFTSRAE+R+SLRPDNAD RLT G ++G + E R +R +R Sbjct: 432 TLGTNEPYRMFTSRAEFRLSLRPDNADLRLTEKGYQIGLVSEERYQRMVS-------IRE 484 Query: 477 LLKSLVLTSKNLSSTSISFKQD-----GKT---RTAYEFL--SYPDFSIQNLFSICPDAR 526 LK + ++ S ++K+ GK ++A+E L + D ++L + P+ Sbjct: 485 KLKMGIELLSDIKKGSNTWKEQLGLPLGKASIHKSAFEMLAITVEDIKTEDLCDLAPEVL 544 Query: 527 ---KFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPA-LSNELKE 582 K ++ ERL+IE+ Y+ Q E +E++ E+ IP+ DY S LS E +E Sbjct: 545 GWIKDDRVLCERLKIEALYSLSIQEQAKEVEEVQRHEQLRIPRSIDYLSRSLNLSYEEQE 604 Query: 583 KLSILKPFNLLQASKIEGMTPAALNLLLIYIKKN 616 KL ++P + AS+I+G+TP+ + L+ Y+K+ Sbjct: 605 KLVNIQPQTIAAASRIQGITPSTIVRLVRYVKQQ 638 >gi|166154713|ref|YP_001654831.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Chlamydia trachomatis 434/Bu] gi|166155588|ref|YP_001653843.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301335987|ref|ZP_07224231.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Chlamydia trachomatis L2tet1] gi|205831521|sp|B0B872|MNMG_CHLT2 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|205831522|sp|B0BCD7|MNMG_CHLTB RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|165930701|emb|CAP04198.1| tRNA uridine 5-carboxymethylase [Chlamydia trachomatis 434/Bu] gi|165931576|emb|CAP07152.1| tRNA uridine 5-carboxymethylase [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 610 Score = 523 bits (1348), Expect = e-146, Method: Compositional matrix adjust. Identities = 275/614 (44%), Positives = 379/614 (61%), Gaps = 16/614 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAGCEAA AAK+GAS L+T TI +SCNPA+GG+GKGH+VREIDAL Sbjct: 8 YDVIVIGAGHAGCEAAYCAAKMGASVLLLTSNLDTIAKLSCNPAVGGIGKGHIVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+M + D +GIQFR+LN KGPAVR PR Q D++LY + M+R + L ++QG Sbjct: 68 GGIMAEITDLSGIQFRILNQTKGPAVRAPRAQVDKQLYHIHMKRLLEQVPGLHIMQGTAE 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + + ++ TVVL++GTF+RG+IHIG GR+GD+ S L Sbjct: 128 ALLDNGEKVLGVSTKEGWAYLGKTVVLSSGTFMRGLIHIGTQNFSGGRLGDAASLGLSED 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI--TNRQIECGIT 243 + F GRLKTGTPARL +I + E+Q D + F + T Q+ C IT Sbjct: 188 LKRLGFPLGRLKTGTPARLLASSIDFSVMEEQPGDHN-VCFVHRNEMFVPTLPQVSCHIT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 T +T +I +N+ SA+Y G I+ GPRYCPSIEDKIV+F +++ H IF+EPEGLNT Sbjct: 247 HTTDQTKDLITKNLHRSALYGGRIEGVGPRYCPSIEDKIVKFADKDRHHIFIEPEGLNTQ 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY NG+ST++P ++Q+ IR++ GLE I RP YAIEYDY++ +FP+LE+K I GL Sbjct: 307 EVYVNGLSTSMPFDVQYDIIRSVSGLENAIITRPAYAIEYDYVHGNVIFPSLESKLIEGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 FL GQINGTTGYEEAAAQGL+AG+N+ K + SR +SYIGVM+DDLT++ + EP Sbjct: 367 FLCGQINGTTGYEEAAAQGLIAGVNAVNKVLRRPPFVPSRQESYIGVMLDDLTTQVLDEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R+ LR DNA RL+ G LG + +R+A + ++ + + L Sbjct: 427 YRMFTSRAEHRLLLRQDNAGMRLSHYGHSLGLLS---SERYAMFQEQKACIEQEKERLSK 483 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICP-DARKFSSLVIERLQIESSY 542 T + T + + L P+ S Q L + P D R +V L++E Y Sbjct: 484 TFRKYGDTVVPLTR---------VLCRPEVSYQQLLTEFPADVRDLGPIVGASLEMEIKY 534 Query: 543 AAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMT 602 + Y RQ + ++ E IP+D DY S+ ALS E +EKLS P + A++I G++ Sbjct: 535 SGYISRQQTLIRSMERSENISIPEDIDYHSISALSLEAREKLSKFTPRTIGSAARISGIS 594 Query: 603 PAALNLLLIYIKKN 616 A + +L++ +KK+ Sbjct: 595 VADIQVLMVSLKKD 608 >gi|297748628|gb|ADI51174.1| Glucose inhibited division protein A [Chlamydia trachomatis D-EC] gi|297749508|gb|ADI52186.1| Glucose inhibited division protein A [Chlamydia trachomatis D-LC] Length = 613 Score = 523 bits (1348), Expect = e-146, Method: Compositional matrix adjust. Identities = 278/615 (45%), Positives = 379/615 (61%), Gaps = 18/615 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAGCEAA AAK+GAS L+T TI +SCNPA+GG+GKGH+VREIDAL Sbjct: 11 YDVIVIGAGHAGCEAAYCAAKMGASVLLLTSNLDTIAKLSCNPAVGGIGKGHIVREIDAL 70 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+M + D +GIQFR+LN KGPAVR PR Q D++LY + M+R + L ++QG Sbjct: 71 GGIMAEITDLSGIQFRILNQTKGPAVRAPRAQVDKQLYHIHMKRLLEQVPGLHIMQGTAE 130 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + + ++ TVVL++GTF+RG+IHIG GR+GD+ S L Sbjct: 131 ALLDNGEKVLGVSTKEGWAYLGKTVVLSSGTFMRGLIHIGTQNFSGGRLGDAASLGLSED 190 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI--TNRQIECGIT 243 + F GRLKTGTPARL +I + E+Q D + F + T Q+ C IT Sbjct: 191 LKRLGFPLGRLKTGTPARLLASSIDFSVMEEQPGDHN-VCFVHRNEMFVPTLPQVSCHIT 249 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 T +T +I +N+ SA+Y G I+ GPRYCPSIEDKIV+F +++ H IF+EPEGLNT Sbjct: 250 HTTDQTKDLITKNLHRSALYGGRIEGVGPRYCPSIEDKIVKFADKDRHHIFIEPEGLNTQ 309 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY NG+ST++P ++Q+ IR++ GLE I RP YAIEYDY++ +FP+LE+K I GL Sbjct: 310 EVYVNGLSTSMPFDVQYDIIRSVSGLENAIITRPAYAIEYDYVHGNVIFPSLESKLIEGL 369 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 FL GQINGTTGYEEAAAQGL+AG+N+ K + SR +SYIGVM+DDLT++ + EP Sbjct: 370 FLCGQINGTTGYEEAAAQGLIAGVNAVNKVLRHPPFVPSRQESYIGVMLDDLTTQVLDEP 429 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R+ LR DNA RL+ G LG + R F + K+ + Sbjct: 430 YRMFTSRAEHRLLLRQDNAGMRLSHYGHSLGLLSSERYAMFQEQ-----------KACIE 478 Query: 484 TSKNLSSTSISFKQDGKTRTAY-EFLSYPDFSIQNLFSICP-DARKFSSLVIERLQIESS 541 K S +F++ G T + L P+ S Q L + P D R +V L++E Sbjct: 479 QEKE--RLSKTFRKYGDTVVPLTKVLCRPEVSYQQLLTEFPADVRDLGPVVGASLEMEIK 536 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y+ Y RQ + ++ E IP+D DY S+ ALS E +EKLS P + A++I G+ Sbjct: 537 YSGYISRQQTLIRSMERSENISIPEDIDYHSISALSLEAREKLSKFTPRTIGSAARISGI 596 Query: 602 TPAALNLLLIYIKKN 616 + A + +L++ +KK+ Sbjct: 597 SVADIQVLMVSLKKD 611 >gi|76789235|ref|YP_328321.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Chlamydia trachomatis A/HAR-13] gi|123606821|sp|Q3KLJ9|MNMG_CHLTA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|76167765|gb|AAX50773.1| GidA [Chlamydia trachomatis A/HAR-13] Length = 610 Score = 523 bits (1348), Expect = e-146, Method: Compositional matrix adjust. Identities = 277/615 (45%), Positives = 379/615 (61%), Gaps = 18/615 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAGCEAA AAK+GAS L+T T+ +SCNPA+GG+GKGH+VREIDAL Sbjct: 8 YDVIVIGAGHAGCEAAYCAAKMGASVLLLTSNLDTVAKLSCNPAVGGIGKGHIVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+M + D +GIQFR+LN KGPAVR PR Q D++LY + M+R + L ++QG Sbjct: 68 GGIMAEITDLSGIQFRILNQTKGPAVRAPRAQVDKQLYHIHMKRLLEQVPGLHIMQGTAE 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + + ++ TVVL++GTF+RG+IHIG GR+GD+ S L Sbjct: 128 ALLDNGEKVLGVSTKEGWAYLGKTVVLSSGTFMRGLIHIGTQNFSGGRLGDAASLGLSED 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI--TNRQIECGIT 243 + F GRLKTGTPARL +I + E+Q D + F + T Q+ C IT Sbjct: 188 LKRLGFPLGRLKTGTPARLLASSIDFSVMEEQPGDHN-VCFVHRNEMFVPTLPQVSCHIT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 T +T +I +N+ SA+Y G I+ GPRYCPSIEDKIV+F +++ H IF+EPEGLNT Sbjct: 247 HTTDQTKDLITKNLHRSALYGGRIEGVGPRYCPSIEDKIVKFADKDRHHIFIEPEGLNTQ 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY NG+ST++P ++Q+ IR++ GLE I RP YAIEYDY++ +FP+LE+K I GL Sbjct: 307 EVYVNGLSTSMPFDVQYDIIRSVSGLENAIITRPAYAIEYDYVHGNVIFPSLESKLIEGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 FL GQINGTTGYEEAAAQGL+AG+N+ K + SR +SYIGVM+DDLT++ + EP Sbjct: 367 FLCGQINGTTGYEEAAAQGLIAGVNAVNKVLRHPPFVPSRQESYIGVMLDDLTTQVLDEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R+ LR DNA RL+ G LG + R F + K+ + Sbjct: 427 YRMFTSRAEHRLLLRQDNAGMRLSHYGHSLGLLSSERYAMFQEQ-----------KACIE 475 Query: 484 TSKNLSSTSISFKQDGKTRTAY-EFLSYPDFSIQNLFSICP-DARKFSSLVIERLQIESS 541 K S +F++ G T + L P+ S Q L + P D R +V L++E Sbjct: 476 QEKE--RLSKTFRKYGDTVVPLTKVLCRPEVSYQQLLTEFPADVRDLGPVVGASLEMEIK 533 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y+ Y RQ + ++ E IP+D DY S+ ALS E +EKLS P + A++I G+ Sbjct: 534 YSGYISRQQTLIRSMERSENISIPEDIDYHSISALSLEAREKLSKFTPRTIGSAARISGI 593 Query: 602 TPAALNLLLIYIKKN 616 + A + +L++ +KK+ Sbjct: 594 SVADIQVLMVSLKKD 608 >gi|194332860|ref|YP_002014720.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prosthecochloris aestuarii DSM 271] gi|194310678|gb|ACF45073.1| glucose inhibited division protein A [Prosthecochloris aestuarii DSM 271] Length = 620 Score = 523 bits (1348), Expect = e-146, Method: Compositional matrix adjust. Identities = 276/620 (44%), Positives = 375/620 (60%), Gaps = 11/620 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IV G GHAGCEA A++G LIT + I MSCNPAIGG+ KG + REIDAL Sbjct: 2 YDIIVAGAGHAGCEAVLAGARMGHKCLLITSDLTAIARMSCNPAIGGVAKGQITREIDAL 61 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + D+ GIQFR+LN KGPA+ PR QADR Y M+R I + N+D++Q V Sbjct: 62 GGEMAKAIDSTGIQFRMLNRSKGPAMHSPRAQADRNEYTQYMRRVIEREPNIDLLQDTVI 121 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGR-MGDSPSNSLFN 184 + ++ +I C +++L GTFL G+IHIG P GR + + P L Sbjct: 122 DIRADNGTCRGAIISTGRIIECRSLILACGTFLNGLIHIGMSHYPGGRTLAEPPVEKLTE 181 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F GRLKTGTPAR+D +++ + K +Q D + FSF T Q+ C +T Sbjct: 182 NLASLGFKQGRLKTGTPARIDKRSVDYTKVSEQPGDTEPVHFSFTTAPARKEQLSCHLTA 241 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETH+I+ S ++SG ++ GPRYCPSIEDKI RF ER H IFLEPEG +T+ Sbjct: 242 TTEETHKILETGFDRSPLFSGKVQGVGPRYCPSIEDKIFRFKERKSHHIFLEPEGFDTNE 301 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y NG ST+LPE+IQ + +R+IPGLE+V IIRPGYAIEYDY P +L PT+ETK I L+ Sbjct: 302 MYVNGFSTSLPEDIQIKAMRSIPGLEQVKIIRPGYAIEYDYFYPWQLHPTMETKVIENLY 361 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAAAQGL+AGIN+A K + + R+++YIGV+IDDL +K EPY Sbjct: 362 FAGQINGTSGYEEAAAQGLMAGINAALKIDGKTPLTLKRSEAYIGVLIDDLITKETNEPY 421 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTS AE+RI LR DNAD RLT G G +R + + ++ LL+ +T Sbjct: 422 RMFTSAAEHRIILRQDNADRRLTSYGHACGLQTSETMERLRQKEAAIHAIQELLREFRIT 481 Query: 485 S---KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNL------FSICPDARKFSSLVIER 535 K LS + S D R L P S+Q++ F +A V E+ Sbjct: 482 PDILKKLSKQNTSALPDESIR-CINLLKRPHVSLQSIKDASSEFQERLNAISADQDVHEQ 540 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y R+ + A++I E +IP+ FDY + LS+E +EKL +P + QA Sbjct: 541 IEIDIKYEGYIKREQLIAEKILRLEDNIIPRSFDYMKIKGLSSEGREKLIRHQPSTIGQA 600 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G+TPA +++L++ I + Sbjct: 601 SRILGVTPADISVLMVKIGR 620 >gi|313667505|ref|YP_004047789.1| glucose inhibited division protein A [Neisseria lactamica ST-640] gi|313004967|emb|CBN86395.1| glucose inhibited division protein A [Neisseria lactamica 020-06] Length = 655 Score = 523 bits (1348), Expect = e-146, Method: Compositional matrix adjust. Identities = 286/621 (46%), Positives = 389/621 (62%), Gaps = 12/621 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 32 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 91 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY+ A++ + +QENLD+ Q Sbjct: 92 ALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKAAIREMLENQENLDLFQQA 151 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + IS ++ + VVLT GTFL G IHIG GR GD + SL Sbjct: 152 VEDVTLDGERISGVITAMGVEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 211 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT----DKITNRQIE 239 + GRLKTGTP R+DG+TI + + +Q D P M+ ++ RQ+ Sbjct: 212 GRLRELKLPQGRLKTGTPPRIDGRTIDFSQLTEQPGD---TPVPIMSVRGSAEMHPRQVS 268 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEG Sbjct: 269 CWITHTNTQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEG 328 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 329 LTTHEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKT 388 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG N+ + + D + R +Y+GV++DDL +KG Sbjct: 389 IEGLFFAGQINGTTGYEEAAAQGLLAGANAVQYVREQDPLLLRREQAYLGVLVDDLITKG 448 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 V EPYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + + LK Sbjct: 449 VNEPYRMFTSRAEYRLQLREDNADMRLTEDGCKIGLVGEAQWRMFNEKREAVEREIQRLK 508 Query: 480 SLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI--CPDARKFSSLVIE 534 + T + L+ + ++ + ++ L P+ L ++ + + ++ VIE Sbjct: 509 TTWYTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGAMPSERLAAEVIE 568 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E + E +P D DY + LS E+++KL+ KP + Q Sbjct: 569 QVEIQVKYQGYIDRQNEEIDSRRDIETLKLPDDIDYGKVKGLSAEVQQKLNQHKPETVGQ 628 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G+TPAA+ LL++++K+ Sbjct: 629 ASRISGVTPAAVALLMVHLKR 649 >gi|304318132|ref|YP_003853277.1| glucose inhibited division protein A [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302779634|gb|ADL70193.1| glucose inhibited division protein A [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 623 Score = 523 bits (1348), Expect = e-146, Method: Compositional matrix adjust. Identities = 273/614 (44%), Positives = 381/614 (62%), Gaps = 4/614 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDV VIG GHAGCEAA A+LG T +I M CNPAIGG K +LVREIDA Sbjct: 7 SYDVAVIGLGHAGCEAALATARLGLKTVAFAINLDSIALMPCNPAIGGPAKTNLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D IQ R LN KGPAVR R Q+D++ Y+ M+ + QENLD+ Q EV Sbjct: 67 LGGQMAINTDETLIQERTLNTSKGPAVRALRAQSDKKRYQFNMKYTLEKQENLDIKQAEV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + S++ ++ + C + ++TTGT+LRG I IG + G G P+N L Sbjct: 127 VDIEVENGEVKSVITKNGARYLCKSCIVTTGTYLRGRIIIGDVSYSGGPNGLFPANELSK 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + + R KTGTPAR+D K+I +D E Q DE++ PFS++ D+I QI C +T Sbjct: 187 CLERLNIKLMRFKTGTPARVDKKSINFDAMEIQPGDEKIKPFSYLHDEINVEQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH +IM NI S +YSG+IK GPRYCPSIEDK+V+F ++ HQ+F+EPEG NT+ Sbjct: 247 TNSRTHEVIMRNIGRSPLYSGEIKGVGPRYCPSIEDKVVKFPDKPRHQLFIEPEGRNTNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+S+++PE++Q +F+RTI GLE V ++RPGYAIEYD I+P +L +LE K ISGLF Sbjct: 307 MYVQGMSSSMPEDVQIEFLRTIKGLENVKVMRPGYAIEYDCIDPTQLKQSLELKTISGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ+NGT+GYEEAAAQGL+AGIN+A K + R+++YIGV+IDDL +KG EPY Sbjct: 367 FAGQVNGTSGYEEAAAQGLMAGINAAMKLLNREPFILDRSEAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSRAEYR+ LR DNAD RLT G ++G + + R +RF K +Y LK+ ++ Sbjct: 427 RMLTSRAEYRLILRQDNADFRLTEKGRQIGLVDDERYERFLKKKIQYEKEMERLKTAMIV 486 Query: 485 SKNLSSTSISFKQDGKTRTA---YEFLSYPDFSIQNLFSICPD-ARKFSSLVIERLQIES 540 + + + K T Y+ L P+ + I D V E++ I Sbjct: 487 PSDFVNEYLKSKGSSPIVTGITMYDLLKRPEIDYISSKVIDKDRPEDIRDDVAEQIDINI 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y +Q+ + ++ K E + IP +Y + +S E ++KL + P ++ QAS+I G Sbjct: 547 KYEGYIKKQLEQVEKFKALENKKIPSWINYDDIKGISIEARQKLKSIMPTSVGQASRISG 606 Query: 601 MTPAALNLLLIYIK 614 ++PA ++++LIY++ Sbjct: 607 VSPADISVILIYMQ 620 >gi|329118274|ref|ZP_08246984.1| glucose inhibited division protein A [Neisseria bacilliformis ATCC BAA-1200] gi|327465695|gb|EGF11970.1| glucose inhibited division protein A [Neisseria bacilliformis ATCC BAA-1200] Length = 631 Score = 523 bits (1347), Expect = e-146, Method: Compositional matrix adjust. Identities = 285/618 (46%), Positives = 392/618 (63%), Gaps = 8/618 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YD+I++GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+DA Sbjct: 9 TYDIIIVGGGHAGTEAALAAARMGADTLLLTHNIETLGQMSCNPSIGGIGKGHLVREVDA 68 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D +GIQFR LN KG AVR R QADR LY+ A++ + +Q NLD+ Q V Sbjct: 69 LGGAMALATDLSGIQFRRLNASKGAAVRATRAQADRILYKAAIREMLENQPNLDLFQQAV 128 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + +S + N + + VVLT GTFL G IHIG GR GD + SL Sbjct: 129 DDILLDGERVSGVKTAMNVVFKARAVVLTAGTFLAGKIHIGLENYSGGRAGDPAAQSLSG 188 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 + + GRLKTGTP R+DG+TI + E+Q D + S + + RQ+ C IT Sbjct: 189 CLKELNLPQGRLKTGTPPRIDGRTIDFSVLEEQPGDTPIPVMSVRGNAAMHPRQVSCWIT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEGL T+ Sbjct: 249 HTNTQTHDIIRTGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEGLTTN 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK I+GL Sbjct: 309 ECYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKTINGL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG N+ + + + R +Y+GV++DDL +KGV EP Sbjct: 369 FFAGQINGTTGYEEAAAQGLLAGANAVQYVRNQEPLILRREQAYLGVLVDDLITKGVNEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT G K+G IG+ + + F + + LK+ Sbjct: 429 YRMFTSRAEYRLQLREDNADMRLTEDGRKIGLIGDAQWRAFNEKREAVEREIHRLKTTWY 488 Query: 484 TSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL---VIERLQ 537 T + LS + + ++ + ++ L P+ L ++ PDA ++L V E+++ Sbjct: 489 TPQKLSESEQMRVFGQKLSREANLHDLLRRPNLDYAALMTL-PDAAPLATLPENVAEQVE 547 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ Y Y RQ E + E +P + DY+ + LS E+++KL+ KP + QAS+ Sbjct: 548 IQVKYQGYIDRQQEEINSRRDIETLRLPAEIDYAKVKGLSAEVQQKLNAHKPETVGQASR 607 Query: 598 IEGMTPAALNLLLIYIKK 615 I G+TPAA+ LL++++K+ Sbjct: 608 ISGVTPAAVALLMVHLKR 625 >gi|255348875|ref|ZP_05380882.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Chlamydia trachomatis 70] gi|255503415|ref|ZP_05381805.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Chlamydia trachomatis 70s] gi|255507093|ref|ZP_05382732.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Chlamydia trachomatis D(s)2923] gi|289525543|emb|CBJ15021.1| tRNA uridine 5-carboxymethylase [Chlamydia trachomatis Sweden2] gi|296435103|gb|ADH17281.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Chlamydia trachomatis E/150] gi|296438823|gb|ADH20976.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Chlamydia trachomatis E/11023] Length = 610 Score = 523 bits (1347), Expect = e-146, Method: Compositional matrix adjust. Identities = 279/616 (45%), Positives = 379/616 (61%), Gaps = 18/616 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAGCEAA AAK+GAS L+T TI +SCNPA+GG+GKGH+VREIDAL Sbjct: 8 YDVIVIGAGHAGCEAAYCAAKMGASVLLLTSNLDTIAKLSCNPAVGGIGKGHIVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+M + D +GIQFR+LN KGPAVR PR Q D++LY + M+R + L ++QG Sbjct: 68 GGIMAEITDLSGIQFRILNQIKGPAVRAPRAQVDKQLYHIHMKRLLEQVPGLHIMQGTAE 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + + ++ TVVL++GTF+RG+IHIG GR+GD+ S L Sbjct: 128 ALLDNGEKVLGVSTKEGWAYLGKTVVLSSGTFMRGLIHIGTQNFSGGRLGDAASLGLSED 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI--TNRQIECGIT 243 + F GRLKTGTPARL +I + E+Q D + F + T QI C IT Sbjct: 188 LKRLGFPLGRLKTGTPARLLASSIDFSVMEEQPGDHN-VCFVHRNEMFVPTLPQISCHIT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 T +T +I +N+ SA+Y G I+ GPRYCPSIEDKIV+F +++ H IF+EPEGLNT Sbjct: 247 HTTDQTKDLITKNLHRSALYGGRIEGVGPRYCPSIEDKIVKFADKDRHHIFIEPEGLNTQ 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY NG+ST++P ++Q+ IR++ GLE I RP YAIEYDY++ +FP+LE+K I GL Sbjct: 307 EVYVNGLSTSMPFDVQYDIIRSVSGLENAIITRPAYAIEYDYVHGNVIFPSLESKLIEGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 FL GQINGTTGYEEAAAQGL+AG+N+ K + SR +SYIGVM+DDLT++ + EP Sbjct: 367 FLCGQINGTTGYEEAAAQGLIAGVNAVNKVLRRPPFVPSRQESYIGVMLDDLTTQVLDEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R+ LR DNA RL+ G LG + R F + K+ + Sbjct: 427 YRMFTSRAEHRLLLRQDNAGMRLSHYGHSLGLLSSERYAMFQEQ-----------KACIE 475 Query: 484 TSKNLSSTSISFKQDGKTRTAY-EFLSYPDFSIQNLFSICP-DARKFSSLVIERLQIESS 541 K S +F++ G T + L P+ S Q L + P D R +V L++E Sbjct: 476 QEKE--RLSKTFRKYGDTVVPLTKVLCRPEVSYQQLLTEFPADVRDLGPIVGASLEMEIK 533 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y+ Y RQ + ++ E IP+D DY S+ ALS E +EKLS P + A++I G+ Sbjct: 534 YSGYISRQQTLIRSMERSENISIPEDIDYHSISALSLEAREKLSKFTPRTIGSAARISGI 593 Query: 602 TPAALNLLLIYIKKNT 617 + A + +L++ +KK+ Sbjct: 594 SVADIQVLMVSLKKDA 609 >gi|94265686|ref|ZP_01289425.1| Glucose-inhibited division protein A subfamily [delta proteobacterium MLMS-1] gi|93453772|gb|EAT04144.1| Glucose-inhibited division protein A subfamily [delta proteobacterium MLMS-1] Length = 627 Score = 523 bits (1347), Expect = e-146, Method: Compositional matrix adjust. Identities = 285/620 (45%), Positives = 382/620 (61%), Gaps = 25/620 (4%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 MIN+ YD+IVIG GHAGCEAA AA+LG TA++ TIG++SCNPA+GGL KGHLV+ Sbjct: 1 MINQRYDIIVIGAGHAGCEAALAAARLGCDTAVLVMNADTIGALSCNPAVGGLAKGHLVK 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G M R DA GIQFR LN KGPAVR R QADR+ Y +++ + Q+NL + Sbjct: 61 EIDALGGEMARNIDATGIQFRRLNTSKGPAVRSSRAQADRQRYPARLKQVLEQQKNLTIR 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + ++ +R V++TTGTFL G+IHIG PAGRMGD PS Sbjct: 121 QSTVDRLLVEDKRVVGVLTSLGEELRAGAVIITTGTFLNGLIHIGLKTFPAGRMGDMPSL 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQI 238 +L + F GR+KTGT RL G +I + E QF D+ FSF + T Q+ Sbjct: 181 ALPTHLKELGFAMGRMKTGTTPRLAGNSIDYSGLEVQFGDDPPPLFSFANAGGRPTLPQL 240 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C IT T TH II S + SG I+ G RYCPSIEDK+ RF +++ HQIFLEPE Sbjct: 241 PCHITYTGAATHEIIRAGCDRSPLLSGVIEGIGARYCPSIEDKVARFADKDRHQIFLEPE 300 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL+T VYPNGIST+LP ++Q +RTIPGLE+ ++RPGYAIEYDY++P EL P+LE+K Sbjct: 301 GLDTTEVYPNGISTSLPMDVQLAMLRTIPGLEQARLVRPGYAIEYDYVDPLELQPSLESK 360 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 +++ LFLAGQINGT+GYEEAAAQGL+AGIN+AR+ + R+ +YIGV+IDDL +K Sbjct: 361 RLANLFLAGQINGTSGYEEAAAQGLLAGINAARQLGGQPPLVLDRSQAYIGVLIDDLVTK 420 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYR+FTSRAEYR+ LR DNAD RL PIG ++G + E+R + F + Q L L Sbjct: 421 GTKEPYRLFTSRAEYRLLLREDNADARLCPIGWQIGLLDEQRYRAFERKQQTMAELHQRL 480 Query: 479 KSLVL-----TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSIC------PDARK 527 + + T++ L+ + S + ++ + E L P+ + + ++ P A Sbjct: 481 RQTTIRPGPATNRRLAELASSPLR--QSCSLAELLKRPELDLAAVLALAQAATDEPAAAG 538 Query: 528 FSSLVIE----------RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALS 577 +E +Q+E Y Y RQ + + + E +P D Y LP LS Sbjct: 539 TEPADLELPVTLPELGHEVQLEIKYEGYITRQREQVERFRKLESIRLPTDLVYRGLPGLS 598 Query: 578 NELKEKLSILKPFNLLQASK 597 +E+ EKL ++P L QA++ Sbjct: 599 SEVVEKLEKVRPRTLGQAAR 618 >gi|15616623|ref|NP_244929.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus halodurans C-125] gi|12643249|sp|Q9RCA8|MNMG_BACHD RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|10176686|dbj|BAB07780.1| glucose-inhibited division protein [Bacillus halodurans C-125] Length = 632 Score = 523 bits (1347), Expect = e-146, Method: Compositional matrix adjust. Identities = 270/614 (43%), Positives = 389/614 (63%), Gaps = 4/614 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+G GHAG EA AA++GA+T ++T + M CNP++GG KG +VREIDAL Sbjct: 8 FDVIVVGAGHAGVEAGLAAARMGANTLMLTLNLDAVAFMPCNPSVGGPAKGIVVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M R D IQ R+LN KGPAVR R QAD+ LY+ M++ I +ENL + QG V Sbjct: 68 GGEMARNIDKTHIQMRMLNTGKGPAVRALRAQADKFLYQHEMKKTIEEEENLLLRQGMVE 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E ++ + R VV+TTGT+LRG I IG L +G PS +L Sbjct: 128 RLIIEDGECRGVITNTGAEYRAKAVVVTTGTYLRGKIIIGDLAYESGPNNMQPSINLSYH 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + F+ R KTGTP R++G+TI +DKTE Q DE FS+ T K Q+ C +T T Sbjct: 188 LQELGFEMVRFKTGTPPRVNGETIDYDKTEIQPGDEVPRAFSYETTKYITDQLPCWLTYT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 +TH+II +N+ S +YSG I+ GPRYCPSIEDKIVRF ++ HQIFLEPEG +T V Sbjct: 248 GDKTHQIINDNLGRSPMYSGMIEGTGPRYCPSIEDKIVRFNDKPRHQIFLEPEGRHTSEV 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+ST+LPE++Q +++IPGLEK ++RPGYAIEYD I P +L+PTLETKK+ GLF Sbjct: 308 YVQGLSTSLPEDVQLDVLKSIPGLEKARMMRPGYAIEYDAIVPTQLWPTLETKKVPGLFT 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGT+GYEEAA QG++AGIN+A + D + R+++YIGV+IDDL +KG EPYR Sbjct: 368 AGQINGTSGYEEAAGQGIMAGINAALRVQGKDGLILDRSEAYIGVLIDDLVTKGTNEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 + TSRAEYR+ LR DNAD RLT G ++G I R +RF + + + L+S+ + Sbjct: 428 LLTSRAEYRLLLRHDNADLRLTEKGYEIGLIARERYERFCEKKAQIAAEKKRLESITVKP 487 Query: 486 KNLSSTSISFKQDGKTRTAYE---FLSYPDFSIQNLFSICP-DARKFSSLVIERLQIESS 541 + + + A + FL P+ + +++ + P ++ S+ V E+++I+ Sbjct: 488 SKEVNALLEEVGSAPLKEAVQANVFLKRPEVTYEHVAKVIPAPEQELSADVAEQVEIQIK 547 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y + + + + K + IP+D DY ++ L+ E K+KLS ++P ++ QAS++ G+ Sbjct: 548 YEGYISKMLQQVERAKKMNDKKIPEDLDYDAINGLATEAKQKLSEVRPLSVGQASRVSGV 607 Query: 602 TPAALNLLLIYIKK 615 P+ +++LL+Y+++ Sbjct: 608 NPSDISILLVYLEQ 621 >gi|325095068|gb|EGC48378.1| mitochondrial translation optimization protein [Ajellomyces capsulatus H88] Length = 673 Score = 523 bits (1346), Expect = e-146, Method: Compositional matrix adjust. Identities = 286/636 (44%), Positives = 393/636 (61%), Gaps = 25/636 (3%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDV+VIGGGHAG EA A AA+LGA TAL+T S IG SCNP+IGG+GKG ++REIDA Sbjct: 11 AYDVVVIGGGHAGSEACAAAARLGARTALVTPSRSNIGVCSCNPSIGGIGKGTMIREIDA 70 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDG+ G+VAD AGIQFR+LN KG AV GPR Q DR LYR M E+ + L +++G+V Sbjct: 71 LDGVAGKVADKAGIQFRILNRSKGEAVWGPRAQIDRVLYRQNMLDELSNTPGLSIVEGKV 130 Query: 125 AGFNTEKN--------IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGD 176 K+ I + ++ +I V++TTGTFL G IHIG P+GR+G+ Sbjct: 131 GDIIVSKDNLPAGSQGKIVGVRLESGEVIPTGRVIITTGTFLGGEIHIGLDVFPSGRLGE 190 Query: 177 SPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT-- 234 + + L S + F GRLKTGTP RLD KTI + E Q D IPFS++ +++ Sbjct: 191 AATFGLSRSLREAGFQLGRLKTGTPPRLDKKTIDFSNLEVQPGDSPPIPFSYLNNRVDVD 250 Query: 235 -NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQI 293 Q+ C T TN H+I+ +N+ S +K GPRYCPS+E KI+RF ++ H I Sbjct: 251 DEDQLPCWSTYTNEAAHQIVRDNLDKSIHIRETVK--GPRYCPSLESKIIRFKDKQRHMI 308 Query: 294 FLEPEGLNTD-VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF 352 +LEPEG D V+YPNGIS +P + Q +RT+ GLE V +++ GY +EYDY++P+ L Sbjct: 309 WLEPEGFKPDEVIYPNGISMTIPADAQLAVLRTVAGLENVRMLQAGYGVEYDYVDPRSLR 368 Query: 353 PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMI 412 PTLETK ISGL+LAGQINGTTGYEEAA QG++AGIN+ S SR+D +IG+M+ Sbjct: 369 PTLETKLISGLYLAGQINGTTGYEEAAGQGILAGINAGLASKSKPPFTLSRSDGFIGIMV 428 Query: 413 DDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYN 472 DDL +KGV EPYRMFTSR+EYRI+ R DNAD RLT G ++G +G++R + F++ + Sbjct: 429 DDLITKGVSEPYRMFTSRSEYRIATRSDNADLRLTARGREVGVVGDKRWEHFSQVQAQIT 488 Query: 473 FLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLF-SICP-------- 523 L++LL++ S S D R+A++ L D SI ++ I P Sbjct: 489 ELQTLLENTKFPSALWSRKGFGVHYDNNVRSAFDLLRLRDISIDDIIPHIEPPSSSRSGK 548 Query: 524 --DARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELK 581 A F+S + R+ +E YA Y + + +E L+P D DYS + LS E + Sbjct: 549 AYTASSFASEIKHRVAVEGRYAPYVKMHADRTRNFEKDEALLLPPDIDYSLITGLSAEER 608 Query: 582 EKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNT 617 L ++P ++ A +IEGMTP A LL+Y+++ T Sbjct: 609 AALEKVRPESIGMARRIEGMTPVAALKLLVYVRRTT 644 >gi|325291446|ref|YP_004267627.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Syntrophobotulus glycolicus DSM 8271] gi|324966847|gb|ADY57626.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Syntrophobotulus glycolicus DSM 8271] Length = 639 Score = 523 bits (1346), Expect = e-146, Method: Compositional matrix adjust. Identities = 268/621 (43%), Positives = 379/621 (61%), Gaps = 12/621 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAGCE A +A++G T L+T IG+M CNP++GG KGHLVREIDAL Sbjct: 12 YDVIVIGAGHAGCEGALASARMGCQTLLVTLNLDKIGNMPCNPSVGGPAKGHLVREIDAL 71 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M AD +Q R+LN KGPAV R Q+D+ Y L + + +L Q+NL ++Q V Sbjct: 72 GGQMALTADDTSLQARMLNTGKGPAVHALRVQSDKRAYHLHLLKTVLQQDNLTLVQALVQ 131 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + + IV + +V+LT GT+LR I IG+ G GD S++L Sbjct: 132 KLLIADHQVCGIVTNTGARFLAESVILTGGTYLRSRIIIGEAIYDGGPTGDLTSSALSLQ 191 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKI-----TNRQIE 239 D GR KTGTP R+ ++ + K Q DE FSFM T+ + +Q+ Sbjct: 192 LQDMDVQLGRFKTGTPPRIHKNSVDYSKFALQCGDEVQRRFSFMPTESLFWGSDPEKQLP 251 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C + T E H+II EN+ + +Y+G ++ GPRYCPSIEDK+VRF ER HQ+FLEPEG Sbjct: 252 CWLGYTTEEGHQIIRENLDRAPLYTGVVEGIGPRYCPSIEDKVVRFAERKAHQLFLEPEG 311 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 +++ +Y G+ST+LPEEIQ +F +IPGLEK I+RPGYAIEYDY+ P +L TLE K Sbjct: 312 FDSEELYVAGMSTSLPEEIQQRFFHSIPGLEKAKILRPGYAIEYDYVKPFQLSLTLELKD 371 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 GLF AGQINGT+GYEEAAAQGL+AGIN+A K + R+D Y+GV+IDDL +K Sbjct: 372 WPGLFTAGQINGTSGYEEAAAQGLLAGINAALKVRNKEAFILRRSDGYLGVLIDDLVNKE 431 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 + EPYR+ TSRAEYR+ LR DNAD RLTP G ++G + + R F K E + + Sbjct: 432 IKEPYRLLTSRAEYRLLLRQDNADLRLTPKGREIGLVSDERWNYFQKKKMELETITEMSH 491 Query: 480 SLVLTSKNLSSTSISFKQD-----GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIE 534 + ++ ++ I K G R A + P+ + Q++ + P +++ S +E Sbjct: 492 NTFFSNMDIKVGEILAKAGSTSLRGSIR-AEDLFKRPEINFQSVLELMPQLKEYQSDTVE 550 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 I+ Y Y +Q+ E + E+RL+P+D D++ + LSNE +++L ++P NL Q Sbjct: 551 EAVIQLKYEGYISKQLEEVERFNRLEERLLPQDLDFNEVRGLSNEARQRLFEVRPLNLGQ 610 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G+ PA +++LLI++++ Sbjct: 611 ASRISGVNPADISVLLIFLEQ 631 >gi|320109234|ref|YP_004184824.1| glucose inhibited division protein A [Terriglobus saanensis SP1PR4] gi|319927755|gb|ADV84830.1| glucose inhibited division protein A [Terriglobus saanensis SP1PR4] Length = 629 Score = 523 bits (1346), Expect = e-146, Method: Compositional matrix adjust. Identities = 294/641 (45%), Positives = 388/641 (60%), Gaps = 46/641 (7%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV V+G GHAGCEAA AA++G TA+ T I MSCNPAIGG+ KGHLVRE+DA+ Sbjct: 7 YDVAVVGAGHAGCEAAVAAARMGLRTAIFTLNLDLIAQMSCNPAIGGIAKGHLVREVDAM 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQE-NLDVIQGEV 124 G+MG VADA GIQFR+LN +GPAV PR Q D+ LYR+ M RE+L +E NL + Q EV Sbjct: 67 GGVMGEVADACGIQFRLLNTSRGPAVWSPRAQCDKALYRVKM-REVLEREKNLFIKQAEV 125 Query: 125 -----------AG--FNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPA 171 AG +T + I+ + ++D +I VV+TTGTFL G+IH G+ + A Sbjct: 126 IDVVLEPVSGSAGQRVSTGQRRITGLRLRDGRVIEAKAVVITTGTFLNGLIHCGEQQYTA 185 Query: 172 GRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD 231 GR G+ S L S K RLKTGTP RLDG+TI W + E+Q DE PFSF T Sbjct: 186 GRSGEPASVLLGESLKKLGLRECRLKTGTPPRLDGRTIDWARFEEQPGDEEPTPFSFRTS 245 Query: 232 K---ITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGER 288 + +QI C I T ET ++I +N+ S +Y+G I+ GPRYCPSIEDKIVRF ++ Sbjct: 246 EEQFPALKQISCYIAVTTPETLQLIRDNVHRSPMYTGQIEGIGPRYCPSIEDKIVRFPDK 305 Query: 289 NGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINP 348 HQ FLEPEGLNT VY NG+ST+LP E+Q +R+IPGL ++RPGYAIEYD I+ Sbjct: 306 TQHQFFLEPEGLNTHEVYINGMSTSLPMEVQSAMVRSIPGLGNAEMLRPGYAIEYDAIDA 365 Query: 349 KELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYI 408 EL +L+ K I GL+LAGQINGT+GYEEAA QGL+AGIN++ R++ Y Sbjct: 366 TELDRSLKVKSIDGLYLAGQINGTSGYEEAACQGLMAGINASLSVKGEPMFTLDRSEGYT 425 Query: 409 GVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYI 468 G++IDDL SKG EPYRMFTSRAE+R+ LR DNAD RLTP LG I + F Sbjct: 426 GILIDDLISKGTNEPYRMFTSRAEFRLHLRIDNADVRLTPKARALGLITDEAWAEFEARQ 485 Query: 469 QEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPD--AR 526 L+ L++ + + L+ L P+ ++ F + P A Sbjct: 486 MRMARLKVALETTRVDGELLAKR----------------LKRPEVTV---FDLIPSLTAS 526 Query: 527 KFSSLVIERLQIES-------SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNE 579 +FS + RL+ E+ YA Y +Q +++K E R+IP F Y + LS E Sbjct: 527 EFSGPLGWRLKSEAKAVETQIKYAGYLAQQDRSVEKLKASEARVIPTSFSYKGISGLSRE 586 Query: 580 LKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVKL 620 ++EKL ++P + QA I G+TPAA+ L+ I I+ +T +L Sbjct: 587 MQEKLERVRPMTVGQAGGIPGVTPAAMTLINILIEVHTREL 627 >gi|329768828|ref|ZP_08260257.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Gemella sanguinis M325] gi|328838221|gb|EGF87834.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Gemella sanguinis M325] Length = 627 Score = 523 bits (1346), Expect = e-146, Method: Compositional matrix adjust. Identities = 275/615 (44%), Positives = 379/615 (61%), Gaps = 3/615 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIGGGHAG EAA +++ G ST +IT TIG M CNP++GG KG +VRE+D Sbjct: 6 KEYDVIVIGGGHAGIEAAYASSRKGVSTLMITINLDTIGFMPCNPSVGGPAKGIVVREVD 65 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL GLMGRVAD IQ ++LN KGPAVR R Q+D+ Y+L M+R + NLD+ Q Sbjct: 66 ALGGLMGRVADKTNIQSKMLNTAKGPAVRALRMQSDKVEYQLEMKRILEDTPNLDIEQAM 125 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E N + + + + TV++TTGT+LRG I IG +K +G PS L Sbjct: 126 VKELIIENNKVVGLKTMLGTAYKAKTVIITTGTYLRGEIVIGDIKYSSGPNHQMPSIDLP 185 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + FD R KTGTP R++ ++ + KT Q D FS+ T + Q+ C +T Sbjct: 186 KQLEELGFDLVRFKTGTPPRVNADSVDFSKTAIQPGDNEKHAFSYETTEYVEDQVPCWLT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II +N+ SA+YSG I+ GPRYCPSIEDK VRF ++ HQ+FLEPEG NT Sbjct: 246 YTNNSTHEIIDKNLGRSAMYSGVIQGTGPRYCPSIEDKYVRFNDKERHQLFLEPEGRNTK 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G+ST+LP+++Q + +I GLE I+R GYAIEYD INP L+PTLETK I GL Sbjct: 306 EIYVQGLSTSLPDDVQRDMVHSIAGLENAVIMRNGYAIEYDAINPTTLWPTLETKLIDGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGT+GYEEAA QG++AGIN+A K + + R ++YIGV+IDDL +KG EP Sbjct: 366 FTAGQINGTSGYEEAAGQGIMAGINAACKVLGEEPMILGRDEAYIGVLIDDLVTKGTNEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAE+R+ LR DNAD RLT K G I E R K+F LK+ + Sbjct: 426 YRLLTSRAEHRLLLRHDNADMRLTEKAYKYGLITEERYKKFCDKRNSVQNEIERLKTFRI 485 Query: 484 TSKNLSSTSISFKQDGKTRT---AYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 T + + + R A + L P+ S +N+ + D K + VIE+++IE Sbjct: 486 TPTQKTLEKLQELNSAEIRDGILAIDMLRRPELSYENIMYLAEDDTKLARDVIEQVEIEV 545 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y + + + +++K + IPKD DY +P+L+ E +EKL + P + QAS+I G Sbjct: 546 KYEGYIKKSLQQVEKLKKMNEMKIPKDLDYDDVPSLAIEAREKLKKVLPLTIGQASRISG 605 Query: 601 MTPAALNLLLIYIKK 615 + PA +++LL+++++ Sbjct: 606 VNPADISILLVFLEQ 620 >gi|331246515|ref|XP_003335890.1| hypothetical protein PGTG_17721 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309314880|gb|EFP91471.1| hypothetical protein PGTG_17721 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 692 Score = 523 bits (1346), Expect = e-146, Method: Compositional matrix adjust. Identities = 278/627 (44%), Positives = 392/627 (62%), Gaps = 14/627 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 I+ ++DV+V+GGGHAG EAA+ AA+ + T L+T ST+G MSCNP+ GG+GKG L+RE Sbjct: 67 ISNNWDVVVLGGGHAGVEAASAAARTNSRTLLVTSNWSTVGEMSCNPSFGGIGKGTLIRE 126 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G+ + D AGI F++LN KGPAV GPR Q DR LY+ A+QR+I SQ NL+V + Sbjct: 127 IDALGGVCAQACDEAGIVFQMLNRSKGPAVYGPRAQMDRGLYKEAIQRQIKSQLNLEVKE 186 Query: 122 GEVAGF-----NTEKNIISS-----IVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPA 171 G V T+ I SS + ++ + C +V+ TGTFL G IHIG+ Sbjct: 187 GTVTDLLLEDDPTQPGITSSRRVAGLKLESGETLNCKALVIATGTFLGGEIHIGRKTSAF 246 Query: 172 GRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-- 229 GR+G+ S SL NS F R+KTGTP R+ +I +D Q D PFSF Sbjct: 247 GRIGERSSTSLSNSLKNSGFKLARMKTGTPPRISKSSIHFDNLMVQQGDVPPKPFSFTNR 306 Query: 230 TDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERN 289 T K N+Q+ C T T TH I+ EN+ S+ ++ +GPRYCPS+E K+ RF R+ Sbjct: 307 TVKHANQQLCCWKTHTTKATHEIVQENLHLSSYVREEV--HGPRYCPSLEAKVTRFSHRD 364 Query: 290 GHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPK 349 H I+LEPEG ++D++YPNGIST +PE+ Q + +RTIPGLEKV +++PGY +EYD+I+P+ Sbjct: 365 SHMIWLEPEGFHSDLIYPNGISTTMPEDAQLKMMRTIPGLEKVEMVQPGYGVEYDHIDPR 424 Query: 350 ELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIG 409 EL TLETK I GLFLAGQINGTTGYEEAAAQG++AGIN+ KS + +R DS+IG Sbjct: 425 ELKNTLETKAIQGLFLAGQINGTTGYEEAAAQGVLAGINAGLKSRNALPLILTRADSFIG 484 Query: 410 VMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQ 469 V++DDLTSKGV EPYRMFTSR+E+R++LR DNAD RLT + G I +RR Sbjct: 485 VLVDDLTSKGVQEPYRMFTSRSEFRVALRVDNADLRLTEKARRCGVIDDRRWNILQDTES 544 Query: 470 EYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFS 529 + + L L+S+ L + + I ++D +TA++ L ++ L I P+ Sbjct: 545 KIDRLILALQSISLPQQTWARHGIKVREDAVQKTAFDVLRVQGVKMELLKPIIPEIDAIE 604 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 + R+++E+ Y R K + +E ++P +YS L LS+E ++KL+ +P Sbjct: 605 EEIWRRVEVEALYRPIIKRYEQNVKYLIEDENMILPSSINYSELEYLSSEARQKLTESRP 664 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKKN 616 L A +++G+ P L LL +++ + Sbjct: 665 LTLGVAQRLQGIDPGELILLRKHLRNS 691 >gi|156064023|ref|XP_001597933.1| hypothetical protein SS1G_00019 [Sclerotinia sclerotiorum 1980] gi|154690881|gb|EDN90619.1| hypothetical protein SS1G_00019 [Sclerotinia sclerotiorum 1980 UF-70] Length = 685 Score = 523 bits (1346), Expect = e-146, Method: Compositional matrix adjust. Identities = 278/622 (44%), Positives = 388/622 (62%), Gaps = 10/622 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R YDV+VIGGGHAG EA A AA+ GA TALIT K IG SCNP+ GG+GKG ++RE+D Sbjct: 36 RPYDVVVIGGGHAGAEACAGAARSGARTALITPKLENIGVCSCNPSFGGIGKGTMLREVD 95 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDG+ GR+ D AG+QF+VLN KKGPAV GPR + DR+LY+ M+ E+ + NL ++ G Sbjct: 96 ALDGVAGRIIDKAGVQFKVLNRKKGPAVWGPRARVDRDLYKKHMREELEAYPNLSIVTGS 155 Query: 124 VAGF-------NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGD 176 VA T+ I+ + ++ +I VV+TTGTFL G IHIG PAGRMG+ Sbjct: 156 VADIIVSKEEGETQNGKITGVRLESGEIIPTKQVVITTGTFLGGEIHIGLECYPAGRMGE 215 Query: 177 SPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT-N 235 + + L S F GRLKTGTP RL +I + Q D+ PFS++ ++ Sbjct: 216 AATFGLSKSLKDAGFTLGRLKTGTPPRLAKGSIDFKNLAVQPGDQPPTPFSYLNKTVSVQ 275 Query: 236 RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFL 295 Q+ C T TN +H ++ N+ S +K GPRYCPS+E K++RF +++ H ++L Sbjct: 276 EQLLCHATYTNEASHAVVRANLDKSIHIRETVK--GPRYCPSLESKVIRFSDKDRHIVWL 333 Query: 296 EPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTL 355 EPEG N+D++YPNGIS +P E Q Q ++TIPGLE V + PGY +EYDY++P+ L TL Sbjct: 334 EPEGFNSDIIYPNGISMTIPAEAQEQLLKTIPGLENVTMTAPGYGVEYDYVDPRSLKATL 393 Query: 356 ETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDL 415 ETK I GL+LAGQINGTTGYEEAAAQG++AGIN+ S L + SR+D YIG+MIDDL Sbjct: 394 ETKAIQGLYLAGQINGTTGYEEAAAQGIIAGINAGLASQSLPQLVLSRSDGYIGIMIDDL 453 Query: 416 TSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLR 475 +KGV EPYRMFTSR+EYR+S R DNAD RLT G G +GE+R F + + L+ Sbjct: 454 ITKGVSEPYRMFTSRSEYRMSARADNADLRLTEKGRSAGVVGEKRWSAFNDEVAQMEGLK 513 Query: 476 SLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIER 535 L ++ + D R+A++ L D +I +L + P+ ++ + +R Sbjct: 514 LALGKSTFSAPVWINDGFKVSNDSTMRSAFDVLRIRDVTINDLSTRIPEILTYTQRIRDR 573 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 + IE+ YA Y +Q + + +E +P D DY S+ +S K L + +P ++ QA Sbjct: 574 VGIEAVYAPYVAQQKAAQRVFQKDEMLKLPVDLDYDSIYGISMHEKSVLKMTRPESVGQA 633 Query: 596 SKIEGMTPAALNLLLIYIKKNT 617 +IEGMTP+ LL ++++ + Sbjct: 634 RRIEGMTPSGCLRLLAFVRERS 655 >gi|238020151|ref|ZP_04600577.1| hypothetical protein GCWU000324_00022 [Kingella oralis ATCC 51147] gi|237868545|gb|EEP69549.1| hypothetical protein GCWU000324_00022 [Kingella oralis ATCC 51147] Length = 631 Score = 523 bits (1346), Expect = e-146, Method: Compositional matrix adjust. Identities = 288/622 (46%), Positives = 391/622 (62%), Gaps = 14/622 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVI++GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 8 KTYDVIIVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 67 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY+ A++ + +Q NLD+ Q Sbjct: 68 ALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKAAIREMLENQPNLDLFQQA 127 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + +S + N + + VVLT GTFL G IHIG GR GD + SL Sbjct: 128 VDDILLDGERVSGVKTAMNVVFKARAVVLTAGTFLAGKIHIGLENYSGGRAGDPAAQSLS 187 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK----ITNRQIE 239 GRLKTGTP R+DG+TI + E+Q D P M+ + + RQ+ Sbjct: 188 GCLKGLQLPQGRLKTGTPPRIDGRTIDFSVLEEQPGD---TPIPVMSVRGNAAMHPRQVS 244 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TNL+TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEG Sbjct: 245 CWITHTNLKTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEG 304 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 305 LTTHEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKT 364 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I+GLF AGQINGTTGYEEAAAQGL+AG N+ + + + R +Y+GV++DDL +KG Sbjct: 365 INGLFFAGQINGTTGYEEAAAQGLLAGANAVQYVRGQEPLILRREQAYLGVLVDDLITKG 424 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 V EPYRMFTSRAEYR+ LR DNAD RLT G K+G IG+ + + F + + LK Sbjct: 425 VNEPYRMFTSRAEYRLQLREDNADMRLTEDGRKIGLIGDAQWRAFNEKREAVEREIQRLK 484 Query: 480 SLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL---VI 533 + T + L + + ++ + ++ L P+ L ++ PDAR +L V Sbjct: 485 TTWYTPQKLPESEQMRVFGQKLSREANLHDLLRRPNLDYAALMTL-PDARPSETLPENVA 543 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I+ Y Y RQ E + E +P + DY+ + LS E+++KL+ KP + Sbjct: 544 EQVEIQVKYQGYIDRQQEEINSRRDIETLRLPAEIDYAKVKGLSAEVQQKLNAHKPETVG 603 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I G+TPAA+ LL++++K+ Sbjct: 604 QASRISGVTPAAVALLMVHLKR 625 >gi|310644870|ref|YP_003949629.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmg [Paenibacillus polymyxa SC2] gi|309249821|gb|ADO59388.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Paenibacillus polymyxa SC2] Length = 629 Score = 522 bits (1345), Expect = e-146, Method: Compositional matrix adjust. Identities = 278/613 (45%), Positives = 383/613 (62%), Gaps = 6/613 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVI++G GHAG E+A AA++G T +IT + M CNP+IGG KGH+VREIDAL Sbjct: 8 YDVIIVGAGHAGVESALAAARMGCRTLMITINLDMVAFMPCNPSIGGPAKGHVVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MGR D IQ R+LN KGPAV R QAD+ Y+ AM+ + + NL + QG V Sbjct: 68 GGEMGRNIDKTFIQMRMLNTGKGPAVHALRAQADKFSYQHAMKETMEKEPNLTLRQGMVE 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E ++ + + R VVLTTGT+LRG I +G+L +G PS L Sbjct: 128 ELIIEDGKCVGVITKTGTEYRSKAVVLTTGTYLRGKIIMGELMYESGPNNQQPSLRLSEH 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + FD R KTGTP R+ TI + KTE Q D++ FS+ T N Q+ C +T T Sbjct: 188 LRELGFDLVRFKTGTPPRVHKDTIDFSKTEIQPGDDQPKFFSYETKSSDNEQLPCWLTYT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 ++ETH+II +N+ + ++SG I+ GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 248 SVETHQIINDNLHRAPMFSGLIEGTGPRYCPSIEDKVVRFSDKPKHQIFLEPEGKNTSEY 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+ST+LPE++Q +RTIPG+EKV ++R GYAIEYD + P +L+PTLETKK+ GLF Sbjct: 308 YVQGLSTSLPEDVQLAVLRTIPGMEKVEMMRNGYAIEYDAMVPTQLWPTLETKKVPGLFT 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGT+GYEEAA QG++AGIN+ARK + + R+ YIGV+IDDL +KG EPYR Sbjct: 368 AGQINGTSGYEEAAGQGIMAGINAARKVQGKEPVVLDRSQGYIGVLIDDLVTKGTNEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF----AKYIQEYNFLRSLLKSL 481 + TSRAEYR+ LR DNAD RLTPIG +G I + R +RF K QE LR Sbjct: 428 LLTSRAEYRLLLRHDNADLRLTPIGHDIGLITDERYERFLDKKQKVEQEIERLRLAKVRP 487 Query: 482 VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 V ++ L + QDG L P+ S + I P + E+++I+ Sbjct: 488 VDVNEMLEQGGSAPIQDGSNLLT--VLRRPEISYAQVAQISPSPVALTEEEQEQVEIQIK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y +Q++ + ++ EK+ +P+D Y+ + L+ E K+KL ++P ++ QAS+I G+ Sbjct: 546 YAGYIEKQLMHVERLQKMEKKKLPEDIAYNEVQGLAIEAKQKLEKIRPMSIGQASRISGV 605 Query: 602 TPAALNLLLIYIK 614 TPA +++LL+Y++ Sbjct: 606 TPADISILLVYLE 618 >gi|296134493|ref|YP_003641740.1| glucose inhibited division protein A [Thermincola sp. JR] gi|296033071|gb|ADG83839.1| glucose inhibited division protein A [Thermincola potens JR] Length = 634 Score = 522 bits (1345), Expect = e-146, Method: Compositional matrix adjust. Identities = 277/623 (44%), Positives = 391/623 (62%), Gaps = 13/623 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIG GHAGCEAA AA+LG T +T + M CNPA+GG KGHLVREIDA Sbjct: 7 TYDVIVIGTGHAGCEAALAAARLGCKTLAVTLNMDNVAFMPCNPAVGGPAKGHLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG D IQ R+LN KGPAV R QAD++LY+L M++ + + NLDV Q V Sbjct: 67 LGGQMGINTDKTHIQMRMLNTGKGPAVHALRAQADKKLYQLEMKKTLELEPNLDVKQALV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + N ++ +V ++ + V++T+GTFLR I IG + G G P+ L Sbjct: 127 EKIILQGNRVTGVVTNTGAIFQARAVIITSGTFLRARIIIGDVNYSGGPSGQFPAQKLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S + + GR KTGTPAR+ K++ + K Q D+ FSF+ K+ QI C +T Sbjct: 187 SLKELGLELGRFKTGTPARVHRKSVDFSKMIIQPGDDYPHTFSFIMPKMKREQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T +TH+II+ N+ S +Y+G I+ GPRYCPSIEDK+VRF ++ HQIFLEPEG +T+ Sbjct: 247 TTEDTHKIILANLHRSPLYTGKIEGTGPRYCPSIEDKVVRFADKPCHQIFLEPEGKDTEE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G ST+LPE+IQ Q +RTI GLEKV ++RPGYAIEYDY+ P +L TLETK I GL+ Sbjct: 307 MYVQGFSTSLPEDIQIQMLRTIIGLEKVEMMRPGYAIEYDYVVPTQLKLTLETKNIEGLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAAAQGLVAGIN+A K +++ R+++YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAAQGLVAGINAALKIKEMEPFILKRSEAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT G K+G + E R + F +Q+ + + + L Sbjct: 427 RIMTSRAEYRLLLRHDNADLRLTEKGYKIGLVDENRYRIF---VQKRDAIEKEISR--LA 481 Query: 485 SKNLSST--------SISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 ++N+S + S+ + + +A+E L P+ + L + V E++ Sbjct: 482 NENISPSEETQRVINSVGSTELKQKISAFELLKRPEITYSVLEQLGAGIADLDEEVKEQV 541 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y Y +QM + + E + IP+ +Y + LS E K+KLS ++P ++ QA Sbjct: 542 EIQVKYEGYIKKQMAQVERFVKMEAKTIPEWVEYEKIQGLSTEAKQKLSSIRPASIGQAG 601 Query: 597 KIEGMTPAALNLLLIYIKKNTVK 619 +I G++PA +++L++YI++ K Sbjct: 602 RISGVSPADISVLMVYIEQQRRK 624 >gi|67540814|ref|XP_664181.1| hypothetical protein AN6577.2 [Aspergillus nidulans FGSC A4] gi|40738916|gb|EAA58106.1| hypothetical protein AN6577.2 [Aspergillus nidulans FGSC A4] gi|259480152|tpe|CBF71023.1| TPA: mitochondrial translation optimization protein (Mto1), putative (AFU_orthologue; AFUA_6G04440) [Aspergillus nidulans FGSC A4] Length = 700 Score = 522 bits (1345), Expect = e-146, Method: Compositional matrix adjust. Identities = 276/624 (44%), Positives = 395/624 (63%), Gaps = 24/624 (3%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R YDV+VIGGGHAG EA A AA+ GA TALIT S IG SCNP+ GG+GKG ++REID Sbjct: 36 RPYDVVVIGGGHAGSEACAAAARSGARTALITPSLSNIGVCSCNPSFGGIGKGTMIREID 95 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 A+DG+ GR+ D AG+ F VLN KGPAV GPR Q DRELY++ M+ E+L+ ENL +++G+ Sbjct: 96 AMDGVAGRIVDKAGLMFMVLNRSKGPAVWGPRAQIDRELYKIYMREELLATENLSIVEGK 155 Query: 124 VAGFNTEKNIISS-----------IVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAG 172 VA K + + + ++ +I S VV+TTGTFL G IHIG P+G Sbjct: 156 VADIVISKEDVGTGPAAPAGKIVGVRLETGEVIPTSRVVITTGTFLGGEIHIGLKAYPSG 215 Query: 173 RMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK 232 R+G++ + L S + F GRLKTGTP RLD KTI + + Q D +PFS++ ++ Sbjct: 216 RIGEAATFGLSKSLREAGFQLGRLKTGTPPRLDKKTIDFSALQVQKGDMPPMPFSYLNER 275 Query: 233 IT---NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERN 289 + + Q+ +T TN +H I+ N+ S +K GPRYCPS+E K++RF ++ Sbjct: 276 VQVDEDAQLNSFLTYTNNASHDIVRANLDKSVHIRETVK--GPRYCPSLESKVIRFKDKT 333 Query: 290 GHQIFLEPEGLN-TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINP 348 H I+LEPEG +V+YPNGIS +PE+ Q + ++TI GLE V +++PGY +EYDYI+P Sbjct: 334 QHLIWLEPEGFAPNEVIYPNGISMTIPEDAQFELLKTIRGLENVRMLQPGYGVEYDYIDP 393 Query: 349 KELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYI 408 + L+PTLETK ISGL+LAGQINGTTGYEEAA QG++AG N+ + + + +R+D YI Sbjct: 394 RNLWPTLETKLISGLYLAGQINGTTGYEEAAGQGIIAGANAGLSAQGREPLTLTRSDGYI 453 Query: 409 GVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYI 468 G+MIDDL +KGV EPYRMFT+R+E+R+S R DNAD RLT + K G +G++R F+ Sbjct: 454 GIMIDDLITKGVSEPYRMFTARSEFRLSARSDNADLRLTRLAHKAGIVGKKRWSHFSDTE 513 Query: 469 QEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLF-------SI 521 + L+SLL + L + ++ + DG R+A+E L++ + +L Sbjct: 514 AQIKELQSLLSNTKLPLAAWARKGLTVRNDGTVRSAHELLAHRAVGLDDLIPHIESPSGT 573 Query: 522 CPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELK 581 A F+ + R+ +E+ YA Y +Q A ++ E IP D DY+++ +S E + Sbjct: 574 AYTASSFAPEIRNRVIVEARYAPYVLKQDKAAARVRRYEDFPIPLDLDYNAIHGISTEER 633 Query: 582 EKLSILKPFNLLQASKIEGMTPAA 605 + L ++P N+ A +IEG+TPA Sbjct: 634 QALERVRPANIGMARRIEGVTPAG 657 >gi|116747555|ref|YP_844242.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Syntrophobacter fumaroxidans MPOB] gi|205831562|sp|A0LEF5|MNMG_SYNFM RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|116696619|gb|ABK15807.1| glucose inhibited division protein A [Syntrophobacter fumaroxidans MPOB] Length = 642 Score = 522 bits (1345), Expect = e-146, Method: Compositional matrix adjust. Identities = 269/617 (43%), Positives = 384/617 (62%), Gaps = 11/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 Y+VIV+G GHAGCEAA AA++G T +++ T+ M C+P++GG+GKGHLVREIDAL Sbjct: 4 YEVIVVGAGHAGCEAALAAARMGCRTLVLSICLDTVAHMPCSPSVGGVGKGHLVREIDAL 63 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + D IQFR+LN KKGPAV G RTQ D+ YR++M+ + S+ NLD+ Q V Sbjct: 64 GGRMALITDRTAIQFRLLNTKKGPAVWGTRTQNDKARYRISMKHCLESEPNLDLKQAHVE 123 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E N I ++ Q VVL TGTFLRG++HIG + AGR G+ S L N Sbjct: 124 SLAVEGNRIVGVIDQLGVFFGADAVVLATGTFLRGLVHIGTTSVEAGRAGELASYPLANQ 183 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + F GR+KTGTPARL ++I + + +Q DE PFS TD I Q+ C I +T Sbjct: 184 LQRLGFTLGRMKTGTPARLGRRSIDFSRFREQHGDEAPKPFSLFTDSIALPQVSCFIGKT 243 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 + TH ++ +I S +Y+G I+ RYCPS+EDK++RF +++ HQI LEPEGL+T+ V Sbjct: 244 HQRTHELVRRHIHLSPLYNGTIRGVSARYCPSLEDKVMRFPDKDFHQIILEPEGLDTEEV 303 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y +G +LP +IQ + I ++PGLE+ ++RP YAIEYD++ P +L TL +K + GL++ Sbjct: 304 YASGTGNSLPYDIQLRLIHSVPGLEEAEVMRPAYAIEYDFVQPTQLKATLGSKLVEGLYM 363 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGT+GYEEAA QGL AGIN+A K+ R+++Y+ VM+DDL ++G EPYR Sbjct: 364 AGQINGTSGYEEAAGQGLWAGINAALKAQGRPPFILDRSEAYLAVMVDDLVTRGTNEPYR 423 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLG-----CIGERRQKRFAKYIQEYNFLRSLLKS 480 +FTSRAEYR+ LR DNAD RL G +LG E R++R A N L L + Sbjct: 424 IFTSRAEYRLLLREDNADLRLLEKGCELGLHSADAAKELRERRGAI----RNELERLRLT 479 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAY--EFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 V S ++ T A + L P+ + + + P SS V E++++ Sbjct: 480 HVRPSAQVNQTLAENHSPPLDAPAPLDKLLKRPELNYSTVAILSPPPEPLSSKVTEQVEV 539 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E Y Y RQ E + + E+ IP+D Y +P LSNEL++KL ++P +L QA++I Sbjct: 540 ECKYEGYLKRQEAEVAKFRQLEQAAIPEDLMYDDIPGLSNELRQKLGAVRPLSLGQATRI 599 Query: 599 EGMTPAALNLLLIYIKK 615 GMTPAA+++L++++++ Sbjct: 600 PGMTPAAVSVLMVHLRR 616 >gi|304389000|ref|ZP_07371047.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria meningitidis ATCC 13091] gi|304337134|gb|EFM03321.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria meningitidis ATCC 13091] Length = 631 Score = 522 bits (1345), Expect = e-146, Method: Compositional matrix adjust. Identities = 285/621 (45%), Positives = 388/621 (62%), Gaps = 12/621 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 8 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 67 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY+ A++ + +QENLD+ Q Sbjct: 68 ALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKAAIREMLENQENLDLFQQA 127 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + IS ++ + VVLT GTFL G IHIG GR GD + SL Sbjct: 128 VEDVTLDGERISGVITAMGVEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 187 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT----DKITNRQIE 239 + GRLKTGTP R+DG+TI + + +Q D P M+ ++ RQ+ Sbjct: 188 GRLRELKLPQGRLKTGTPPRIDGRTIDFSQLTEQPGD---TPVPVMSVRGSTEMHPRQVS 244 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEG Sbjct: 245 CWITHTNTQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEG 304 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 305 LTTHEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKT 364 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG N+ + + D + R +Y+GV++DDL +KG Sbjct: 365 IEGLFFAGQINGTTGYEEAAAQGLLAGANAVQYVREQDPLLLRREQAYLGVLVDDLITKG 424 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 V EPYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + + LK Sbjct: 425 VNEPYRMFTSRAEYRLQLREDNADMRLTEDGYKIGLVGEAQWRMFNEKREAIEREIQRLK 484 Query: 480 SLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI--CPDARKFSSLVIE 534 + T + L+ + ++ + ++ L P+ L ++ + + S+ V+E Sbjct: 485 TTWYTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGAMPSERLSAEVVE 544 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E + E +P DY + LS E+++KL+ KP + Q Sbjct: 545 QVEIQVKYQGYIDRQNEEIDSRRDIETLKLPDGIDYGKVKGLSAEVQQKLNQHKPETVGQ 604 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G+TPAA+ LL++++K+ Sbjct: 605 ASRISGVTPAAVALLMVHLKR 625 >gi|194754892|ref|XP_001959726.1| GF11898 [Drosophila ananassae] gi|190621024|gb|EDV36548.1| GF11898 [Drosophila ananassae] Length = 663 Score = 522 bits (1345), Expect = e-146, Method: Compositional matrix adjust. Identities = 285/634 (44%), Positives = 416/634 (65%), Gaps = 32/634 (5%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+VIGGGHAG EA+A AA++G+ T L+THK TIG MSCNP+ GG+GKGHL+RE+DAL Sbjct: 32 YDVVVIGGGHAGTEASAAAARMGSRTLLLTHKLETIGEMSCNPSFGGIGKGHLMREVDAL 91 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DG+ R D +G+ ++VLN ++GPAV GPR Q DR+LY+ A+QRE+ S NL++ V Sbjct: 92 DGVCARCCDVSGVHYKVLNRRRGPAVWGPRAQIDRQLYKKAVQRELHSTPNLEIRAAAVD 151 Query: 126 GFNTEKNIISS-------IVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSP 178 E + S +++ + ++R +VVLTTGTFLR I+IG PAGR+GD+P Sbjct: 152 NILIEDDTPDSQNRRCGGVLLANGEVVRSRSVVLTTGTFLRAHINIGLEVRPAGRIGDAP 211 Query: 179 SNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI---TN 235 + +L + + F GRLKTGTP R+ +I + + E+ D+ +PFSF+ + T Sbjct: 212 AKALGEAIDRLGFRMGRLKTGTPPRIAKSSIDFSQLERHEGDDPPMPFSFLNKNVWIPTK 271 Query: 236 RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFL 295 Q+ C +T T + I+ +N+ + + +I GPRYCPSIE KI+RFG + HQ++L Sbjct: 272 EQLPCYLTYTTPKVSDIVRDNLHVNRHVTEEIT--GPRYCPSIESKILRFGAKV-HQVWL 328 Query: 296 EPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTL 355 EPEGL++ +VYP GIS LP E Q + + I GLEK +++PGY +EYD+I+P+EL+PTL Sbjct: 329 EPEGLDSPLVYPQGISCTLPHEQQIELVHAIQGLEKAEVVQPGYGVEYDFIDPRELYPTL 388 Query: 356 ETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDC--ICFSRTDSYIGVMID 413 ETK++ GLF AGQINGTTGYEEAAAQG++AG N+A K+ D + SRT+ YIGV+ID Sbjct: 389 ETKRVQGLFFAGQINGTTGYEEAAAQGIIAGANAAGKTLHKDGKQLTISRTEGYIGVLID 448 Query: 414 DLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNF 473 DLTS G EPYRMFTSRAE+R+SLRPDNAD RLT G G + + R + F K + Sbjct: 449 DLTSLGTNEPYRMFTSRAEFRLSLRPDNADMRLTQKGYDFGLVSKHRYEHFRKTEER--- 505 Query: 474 LRSLLKSLVLTSKNL----SSTSISFKQDGKTRTAYEFLSYP--DFSIQNLFSICPDARK 527 L+S + SL K+ + + + +TA+E LS P + +++ L + P ++ Sbjct: 506 LQSAIDSLRKLRKHTHYWRQALDLPIAKASVEKTAFEMLSIPADNITVEQLIQLHP--KE 563 Query: 528 FSSL-----VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDY-SSLPALSNELK 581 S L + ER++IE+ Y+ + Q + ++++ EE+ IP D DY S +LSNE + Sbjct: 564 LSWLADDRNLAERIKIEALYSFFVEEQQRDVEDVRREERLTIPADIDYFSKTLSLSNEER 623 Query: 582 EKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 +KL++++P + AS+I+G+TP+ + ++ Y+KK Sbjct: 624 QKLTLIQPQTIAAASRIQGVTPSTIVRIMKYVKK 657 >gi|317153203|ref|YP_004121251.1| glucose inhibited division protein A [Desulfovibrio aespoeensis Aspo-2] gi|316943454|gb|ADU62505.1| glucose inhibited division protein A [Desulfovibrio aespoeensis Aspo-2] Length = 627 Score = 522 bits (1344), Expect = e-146, Method: Compositional matrix adjust. Identities = 273/614 (44%), Positives = 365/614 (59%), Gaps = 3/614 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 S+D+IV+G GHAGCEAA A++LG +T L+T IG +SCNPAIGGL KGH+VREIDA Sbjct: 10 SFDLIVVGAGHAGCEAAMAASRLGLATLLLTISIDRIGHLSCNPAIGGLAKGHMVREIDA 69 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G+MG ADAAGIQFR LN +KGPAVR R Q DR Y +QR + Q+NL V Q Sbjct: 70 LGGMMGLWADAAGIQFRTLNTRKGPAVRSSRAQIDRAEYMRVVQRSVFGQDNLWVFQDTA 129 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + Q IR V+LTTGTFL+G+IH+G GRMGD S L Sbjct: 130 DSVLVEGGQACGVRTQLGETIRSRAVLLTTGTFLKGLIHVGLDNFSGGRMGDPASGPLSG 189 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + GRLKTGT RL ++ +D+ E Q D+ PFSF + Q+ C +T Sbjct: 190 NLRALGLTLGRLKTGTTPRLLKSSVDFDRMEAQPGDDPPKPFSFRNTTVPLPQVPCHLTY 249 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN E H I S +++G I+ G RYCPSIEDK+ RF E++ HQIF+EPEGL+ Sbjct: 250 TNPEAHEAIRSGFDRSPMFTGVIEGTGARYCPSIEDKVARFPEKDRHQIFIEPEGLDNPE 309 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYP+GI T+LP +IQ + + I GLE I+RPGYAIEYDY P +L PTLETK + GL+ Sbjct: 310 VYPSGIPTSLPLDIQKRMVAAIVGLENAQIVRPGYAIEYDYAPPTQLRPTLETKVLPGLY 369 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGT+GYEEAAAQGL A +N ++ + +R +Y+ V++DDL +KG LEPY Sbjct: 370 LAGQINGTSGYEEAAAQGLWAALNVVCRATGREPFLPTRDQAYMAVLVDDLVTKGTLEPY 429 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAE+R+ LR NAD R+TP+G LG + + + F + + L+++ + Sbjct: 430 RMFTSRAEHRLLLREGNADERMTPLGRDLGLVDDEHWRLFTTKRERLQSVIEALQTIRVR 489 Query: 485 SKNLSS---TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 ++ I GK L P SIQ+L + P V+ + Sbjct: 490 PDAVNRGIMERIGAAVPGKAVELAALLRQPQVSIQSLAAFHPALADMDEEVLTEAETRIR 549 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y +Q + E +P D DY+++ L+ E+ EKL+ ++P L QAS+I G+ Sbjct: 550 YEGYLRKQEELVVRSRLLEDVSLPLDTDYATVSGLTREVVEKLTAIQPLTLGQASRISGV 609 Query: 602 TPAALNLLLIYIKK 615 TPAA++ L I +KK Sbjct: 610 TPAAISCLEIDLKK 623 >gi|308071638|ref|YP_003873243.1| glucose inhibited division protein A [Paenibacillus polymyxa E681] gi|305860917|gb|ADM72705.1| Glucose inhibited division protein A [Paenibacillus polymyxa E681] Length = 629 Score = 522 bits (1344), Expect = e-146, Method: Compositional matrix adjust. Identities = 279/613 (45%), Positives = 383/613 (62%), Gaps = 6/613 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAG E+A AA++G T +IT + M CNP+IGG KGH+VREIDAL Sbjct: 8 YDVIVVGAGHAGVESALAAARMGCRTLMITINLDMVAFMPCNPSIGGPAKGHVVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MGR D IQ R+LN KGPAV R QAD+ Y+ AM+ + + NL + QG V Sbjct: 68 GGEMGRNIDKTFIQMRMLNTGKGPAVHALRAQADKFSYQHAMKETMEKEPNLTLRQGMVE 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E ++ + + R VVLTTGT+LRG I +G+L +G PS L Sbjct: 128 ELIMEDGHCVGVITKTGTEYRSKAVVLTTGTYLRGKIIMGELMYESGPNNQQPSLRLSEH 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + FD R KTGTP R+ TI + KTE Q D++ FS+ T N Q+ C +T T Sbjct: 188 LRELGFDLVRFKTGTPPRVHKDTIDFSKTEIQPGDDQPKFFSYETKSSDNEQLPCWLTYT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 ++ETH+II +N+ + ++SG I+ GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 248 SVETHQIINDNLHRAPMFSGLIEGTGPRYCPSIEDKVVRFSDKPKHQIFLEPEGKNTSEY 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+ST+LPE++Q +R+IPG+EKV ++R GYAIEYD + P +L+PTLETKK+ GLF Sbjct: 308 YVQGLSTSLPEDVQLAVLRSIPGMEKVEMMRNGYAIEYDAMVPTQLWPTLETKKVPGLFT 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGT+GYEEAA QG++AGIN+ARK + + R+ YIGV+IDDL +KG EPYR Sbjct: 368 AGQINGTSGYEEAAGQGIMAGINAARKVQGKEPVVLDRSQGYIGVLIDDLVTKGTNEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF----AKYIQEYNFLRSLLKSL 481 + TSRAEYR+ LR DNAD RLTPIG +G I + R +RF K QE LR Sbjct: 428 LLTSRAEYRLLLRHDNADLRLTPIGHDIGLITDERYERFLDKKQKVEQEIERLRLAKVRP 487 Query: 482 VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 V ++ L + QDG L P+ S + I P + E+++I+ Sbjct: 488 VDINEMLQQGGSAPIQDGSNLLT--VLRRPEISYAQVAQISPSPIALTEEEQEQVEIQIK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y +Q++ + ++ EK+ +P+D YS + L+ E K+KL ++P ++ QAS+I G+ Sbjct: 546 YAGYIEKQLMHVERLQKMEKKKLPEDIVYSEVQGLAIEAKQKLEKIRPMSIGQASRISGV 605 Query: 602 TPAALNLLLIYIK 614 TPA +++LL+Y++ Sbjct: 606 TPADISILLVYLE 618 >gi|296274537|ref|YP_003657168.1| glucose inhibited division protein A [Arcobacter nitrofigilis DSM 7299] gi|296098711|gb|ADG94661.1| glucose inhibited division protein A [Arcobacter nitrofigilis DSM 7299] Length = 630 Score = 522 bits (1344), Expect = e-146, Method: Compositional matrix adjust. Identities = 279/619 (45%), Positives = 385/619 (62%), Gaps = 14/619 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAG EA+ +A++G T L+T IG+ SCNPAIGGL KGHLVRE+DAL Sbjct: 3 YDVIVVGGGHAGIEASLASARMGKKTLLVTMLVEQIGAASCNPAIGGLAKGHLVRELDAL 62 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG D+AGIQFR+LN KG AV+G R Q D + YR M++ + ENL++ Q EV+ Sbjct: 63 GGEMGLCTDSAGIQFRILNASKGAAVQGSRAQIDMDRYRTYMRKVCHNTENLEIYQDEVS 122 Query: 126 GFNTEKN---IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 T+ + + + V+LTTGTF++G+IHIG AGR + PS++L Sbjct: 123 SLLTKDENGLEVCGVKTKLGEEFESKKVILTTGTFMKGLIHIGTSTYDAGRAWELPSSTL 182 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--NRQIEC 240 +F + GRLKTGTPAR+D K+I + K E+ DE+ PFSF TDK T +Q C Sbjct: 183 STQLKEFGLNVGRLKTGTPARIDAKSINFSKMEEHGGDEKPTPFSFRTDKSTFNPKQHPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TNL TH I N + +++G IK GPRYCPSIEDK+ RF ER+ HQ+FLEP+ Sbjct: 243 YITYTNLGTHGKISSNFHRAPLFTGQIKGSGPRYCPSIEDKVNRFSERDRHQLFLEPQTA 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 Y NG+ST++P ++Q + I +I GLE I+R GYAIEYDY++P EL TLETKK+ Sbjct: 303 MATEYYINGLSTSMPIDVQKEMIHSIAGLENAKIVRYGYAIEYDYVDPTELKHTLETKKV 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 L+ AGQIN TTGYEEAA+QGL+AGIN++ + + + R ++YIGV+IDDL +KG Sbjct: 363 KNLYHAGQINATTGYEEAASQGLMAGINASLAIDNKEPLILRRDEAYIGVLIDDLVTKGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFA---KYIQEYNFLRSL 477 EPYRMFTSRAEYR+ LR + AD RL+ G K+G I + ++ K I+E Sbjct: 423 AEPYRMFTSRAEYRLLLREEGADIRLSEYGHKIGLINDETIQKVQYKEKCIKE---AIDF 479 Query: 478 LKSLVLTSK--NLSSTSISFKQDGKTRT-AYEFLSYPDFSIQNLFSICPDARKFSSLVIE 534 +K TSK NL + K R + + + +N +CP ++ + + E Sbjct: 480 MKEEWFTSKKENLELLEKLGQDKIKDRVLLLDIVGRNGVTTENFDELCPQFKELDNYIKE 539 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 ++ IE+ Y Y +Q + +++K + IP+ FDY +P LSNE EKL +P L Sbjct: 540 QIIIEAKYYRYVEKQQKQIEKMKKMIQLKIPESFDYKEIPGLSNEAIEKLEKFRPPTLFN 599 Query: 595 ASKIEGMTPAALNLLLIYI 613 A +I G+TPAA++++ +YI Sbjct: 600 AGEISGITPAAVDVIHLYI 618 >gi|145614278|ref|XP_364007.2| hypothetical protein MGG_08852 [Magnaporthe oryzae 70-15] gi|145021212|gb|EDK05341.1| hypothetical protein MGG_08852 [Magnaporthe oryzae 70-15] Length = 1186 Score = 522 bits (1344), Expect = e-146, Method: Compositional matrix adjust. Identities = 287/638 (44%), Positives = 402/638 (63%), Gaps = 32/638 (5%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + RS+DV+VIGGGHAG EA AA+ GA TAL+T K +G+ SCNP+IGG+GKG ++R Sbjct: 531 LATRSFDVVVIGGGHAGAEACVAAARAGARTALVTPKMDNLGTCSCNPSIGGIGKGTMIR 590 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDALDGL GRV D AG+QF+VLN KKGPAV GPR Q DRELY+ M+ E+LS NLDV+ Sbjct: 591 EIDALDGLAGRVVDKAGVQFKVLNRKKGPAVWGPRAQIDRELYKKHMREELLSYPNLDVV 650 Query: 121 QGEV----AGFNTE-----KNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPA 171 V G N + K I + + IR + VV+TTGTFL G IHIG P+ Sbjct: 651 LDSVDDIIVGENPDPSTGAKGKIQGVRLASGEEIRTNQVVITTGTFLGGEIHIGLEAFPS 710 Query: 172 GRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD 231 GRMG++ + L S F GRLKTGTP RLD K+I + ++ DE +PFSFM D Sbjct: 711 GRMGEAATFGLSKSLRDAGFQLGRLKTGTPPRLDKKSIDFGILQEHGGDEPPMPFSFMND 770 Query: 232 KITNR-QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNG 290 + + Q+ C +T TN +H ++ N+ + +K GPRYCPS+E K++RF +R+ Sbjct: 771 SVAVKDQLLCHMTYTNQASHDVVRANLDKTIHIRETVK--GPRYCPSLEAKVIRFPQRDS 828 Query: 291 HQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKE 350 H ++LEPEG +TDV+YPNG+S +P Q + +RTI GLE V +++PGY +EYDY++P+ Sbjct: 829 HVVWLEPEGFDTDVIYPNGLSMTIPAAAQEELLRTIVGLENVKMLQPGYGVEYDYVDPRS 888 Query: 351 LFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGV 410 L +LETK ISGLFLAGQINGTTGYEEAA QG+VAGIN+ R + L +R D YIG+ Sbjct: 889 LKLSLETKAISGLFLAGQINGTTGYEEAAGQGIVAGINAGRAAMGLPAATLTRADGYIGI 948 Query: 411 MIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQE 470 MIDDL +KGV EPYRMFTSR+E+R+S R DNAD+RLT G G + + R F ++ Sbjct: 949 MIDDLVTKGVSEPYRMFTSRSEFRMSTRADNADSRLTARGRAWGVVSDSRWASFESEREQ 1008 Query: 471 YNFLRSLLKSLVLTSKNLSSTSISFKQDG--KTRTAYEFLSYPDFSIQNLFSICPD---- 524 L +L S+ ++ S+++DG R++ ++ D ++ I D Sbjct: 1009 IAELTEVLASVAQGAE-------SWQRDGFQSVRSSSSPINGLDI-VRRGVDIASDNGVL 1060 Query: 525 ARKFSSL------VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSN 578 A+KF +L + ER+ +E++YA Y + + +E ++P D DY ++ +S Sbjct: 1061 AKKFPNLHKYPRRIRERVAVEAAYAPYVEKDVRIRDRALRDEGLILPPDIDYDTVSGISI 1120 Query: 579 ELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKN 616 ++ L ++P + Q ++EGMTPA LL+Y+++N Sbjct: 1121 AERQALMAIRPETMGQVKRLEGMTPAGAFNLLLYLRRN 1158 >gi|332187044|ref|ZP_08388785.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Sphingomonas sp. S17] gi|332013054|gb|EGI55118.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Sphingomonas sp. S17] Length = 572 Score = 522 bits (1344), Expect = e-146, Method: Compositional matrix adjust. Identities = 257/574 (44%), Positives = 365/574 (63%), Gaps = 7/574 (1%) Query: 44 MSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELY 103 MSCNPAIGGLGKGH+VRE+DA DGL+GR AD I +R+LN KG AV+GPR QADR Y Sbjct: 1 MSCNPAIGGLGKGHIVREVDAFDGLIGRAADEGAIHYRMLNRSKGTAVQGPRVQADRRRY 60 Query: 104 RLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIH 163 A+Q + +Q L +++GE + + ++ + + D + + VVL TGTFL G + Sbjct: 61 AGAIQAILAAQPKLTIVEGEAEALVLDGDRVAGVQLADGTTLAARAVVLATGTFLGGRLF 120 Query: 164 IGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERL 223 G+ + GR+G+ + + R+KTGTP RLDG+TI W K ++Q +D Sbjct: 121 RGEERHLGGRIGERAATRMAEQLRALGLPMARMKTGTPPRLDGRTIDWAKLDEQPSDSDP 180 Query: 224 IPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIV 283 S MT QI C ITRT ETH II S +++G I++ GPRYCPSIEDKI Sbjct: 181 WTMSPMTAARPLPQIACAITRTTEETHAIIAAAFHRSPLFTGAIEANGPRYCPSIEDKIK 240 Query: 284 RFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEY 343 RF +R+ HQIFLEPEGL+ +VYPNG+ST+LP ++Q I ++PGLE+ I PGYA+EY Sbjct: 241 RFADRDSHQIFLEPEGLDDPLVYPNGLSTSLPTDVQEAMIASMPGLERAVITLPGYAVEY 300 Query: 344 DYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSR 403 D+I+P+ L L ++G+F AGQINGTTGYEEAA QGL+AG+N+A + + R Sbjct: 301 DHIDPRALDARLALGALAGVFCAGQINGTTGYEEAAGQGLIAGLNAAAHACDWAPVILDR 360 Query: 404 TDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKR 463 SY+GVMIDDL +GV EPYRM T+RAEYR+SLR DNA++RL I GC+ R Sbjct: 361 ASSYLGVMIDDLVLQGVTEPYRMLTARAEYRLSLRADNAESRLGGIAEAAGCLSPERLAH 420 Query: 464 FAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICP 523 + +++ LR L + V T+ +L+ + + QDG RTAYE+L + ++ + + P Sbjct: 421 RQRRLEQRTVLRDRLAT-VRTASDLARSGAAIAQDGARRTAYEWLRFDGVTLAH---VVP 476 Query: 524 DARKF--SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELK 581 DA ++V E L+ ++ YA Y RQ E ++ +E+ L+P DY+++P LS E+ Sbjct: 477 DAADGLDPAVVAETLE-DARYAPYVERQAEEVARLRADEQILLPISLDYAAIPGLSQEMI 535 Query: 582 EKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 ++LS+ +P L AS+I G+TPAAL+ +L++ +K Sbjct: 536 DRLSLARPATLAAASRIRGITPAALSAVLLHARK 569 >gi|261190947|ref|XP_002621882.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ajellomyces dermatitidis SLH14081] gi|239590926|gb|EEQ73507.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ajellomyces dermatitidis SLH14081] Length = 698 Score = 522 bits (1344), Expect = e-146, Method: Compositional matrix adjust. Identities = 285/636 (44%), Positives = 396/636 (62%), Gaps = 24/636 (3%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDV+VIGGGHAG EA A AA+LGA TAL+T S IG SCNP+IGG+GKG ++REID Sbjct: 36 QPYDVVVIGGGHAGSEACAAAARLGARTALVTPSRSNIGVCSCNPSIGGIGKGTMIREID 95 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDG+ G+V D AGIQFR+LN KG AV GPR Q DR LY+ M E+ + L +++G+ Sbjct: 96 ALDGVAGKVTDKAGIQFRILNRSKGEAVWGPRAQIDRVLYQKNMLEELSNTPGLSIVEGK 155 Query: 124 VAGFNTEKNI--------ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMG 175 V K+ I + ++ +I V++TTGTFL G IHIG P+GRMG Sbjct: 156 VGDIVVSKDHSPEGSQGKIVGVRLESGEVIPTGRVIITTGTFLGGEIHIGLESFPSGRMG 215 Query: 176 DSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT- 234 ++ + L S + F GRLKTGTP RLD KTI + + Q D +PFS++ ++ Sbjct: 216 EAATFGLSKSLREAGFKLGRLKTGTPPRLDKKTIDFSNLQVQPGDSPPVPFSYLNKRVDV 275 Query: 235 --NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQ 292 Q+ C T TN H+I+ +N+ S +K GPRYCPS+E KI+RF ++ H Sbjct: 276 NDEDQLPCWSTYTNEAAHQIVRDNLDKSIHIRETVK--GPRYCPSLESKIIRFKDKQRHM 333 Query: 293 IFLEPEGLN-TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKEL 351 I+LEPEG +V+YPNGIS +P + Q +RT+ GLE V++++ GY +EYDY++P+ L Sbjct: 334 IWLEPEGFEPNEVIYPNGISMTIPADAQLAMLRTVAGLENVHMLQAGYGVEYDYVDPRSL 393 Query: 352 FPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 PTLETK ISGL+LAGQ+NGTTGYEEAA QG++AGIN+ S SR+DS+IG+M Sbjct: 394 RPTLETKLISGLYLAGQVNGTTGYEEAAGQGVLAGINAGLASKGKPPFTLSRSDSFIGIM 453 Query: 412 IDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEY 471 IDDL +KGV EPYRMFTSR+EYRIS R DNAD RLT G ++G +G++R + F++ ++ Sbjct: 454 IDDLITKGVSEPYRMFTSRSEYRISTRSDNADLRLTARGREVGVVGDKRWEHFSQVQEQV 513 Query: 472 NFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLF-SICPDARK--- 527 L++LL++ S + + D R+A++ L D SI ++ I P + K Sbjct: 514 TELQTLLENTKFPSTLWARKGFAVHCDHNPRSAFDLLRLRDVSIDDIIPHIEPPSSKGGK 573 Query: 528 ------FSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELK 581 F + R+ IE YA Y A+ + +E L+P D +YS + LS E + Sbjct: 574 AYTTSSFPPEIKYRVSIEGRYAPYVTMHEARARSFEKDEALLLPPDMNYSLITGLSTEER 633 Query: 582 EKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNT 617 L ++P ++ A +IEGMTP A LL+Y++KNT Sbjct: 634 AALERVRPESIGMARRIEGMTPVAALKLLVYVRKNT 669 >gi|324507225|gb|ADY43066.1| Unknown [Ascaris suum] Length = 658 Score = 522 bits (1344), Expect = e-146, Method: Compositional matrix adjust. Identities = 282/626 (45%), Positives = 391/626 (62%), Gaps = 18/626 (2%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALD 66 DVIV+GGGHAGCEAA AA+ G ST L+TH+ TIG MSCNP+ GG+GKGHL+RE+DA+D Sbjct: 21 DVIVVGGGHAGCEAATAAARTGVSTVLLTHRQDTIGEMSCNPSFGGIGKGHLIREVDAMD 80 Query: 67 GLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQE-NLDVIQGEVA 125 G+ GR+ D I ++ LNV +GPAV G R Q DR LY+ M++EI+ NL VI+G V Sbjct: 81 GVCGRICDQTAITYQALNVGQGPAVLGLRAQIDRSLYKRHMRKEIVENTPNLRVIEGAVE 140 Query: 126 GFNTEKN-----IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 E+ ++ + ++D M+ +VV+TTGTFL G I G K PAGR+G+ S Sbjct: 141 DLAIERAEDGSLCVAGVRLEDGRMLLSKSVVITTGTFLGGQIFRGMKKYPAGRIGEKSST 200 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT---NRQ 237 L + + F GRL+TGTP RL +TI ++K D + IPFSF+TD++ + Q Sbjct: 201 GLSKTLNELGFKLGRLRTGTPPRLLKRTIDFNKFTTMLPDRKPIPFSFLTDRVWLDPSEQ 260 Query: 238 IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 + ++ TN +++ +N ++ + + GPRYCPS+E KI++F + H+IFLE Sbjct: 261 LPTYLSYTNDRVAQLVHDNFHNNEYIRSE--ANGPRYCPSLEAKILKFANMH-HRIFLEH 317 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EGL ++++YP G+S E+Q Q +R IPGLE V I GY +EYD++NP++L P+LET Sbjct: 318 EGLESELIYPQGMSMTFQPEVQLQIMRAIPGLENVEITEAGYGVEYDFVNPQQLHPSLET 377 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 K + L AGQINGTTGYEEAAAQG+VAGIN++ S +C+ RT+ YIGV+IDDLTS Sbjct: 378 KVVKRLLFAGQINGTTGYEEAAAQGVVAGINASALSRGKECLLIDRTEGYIGVLIDDLTS 437 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL 477 G EPYRMFTSRAE+R+ LRPDNAD RLT + G + E R RF ++++ +L Sbjct: 438 LGTSEPYRMFTSRAEFRLHLRPDNADMRLTEKAYRAGAVSEHRYARFCTMRRKFDDAVAL 497 Query: 478 LKSLVLTSKNLSSTSISF---KQDGKTRTAYEFLSYPDFSIQNLFSICPDA-RKF--SSL 531 LKS+ + + F K GK AYE L D S++ L + P+ KF Sbjct: 498 LKSIEMPISRWIQSLPRFTTKKGGGKVLNAYEMLHRFDISMEQLATAFPNELNKFVGDEQ 557 Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 + R++ E YA R +E++ E LIP++ DYS++ LS E KEK +P N Sbjct: 558 LESRIKNEGIYAQQHERLTARMEEVRRECATLIPENTDYSTMDGLSFECKEKFETWRPQN 617 Query: 592 LLQASKIEGMTPAALNLLLIYIKKNT 617 L AS+I G+TP AL +LL Y+K T Sbjct: 618 LAAASRIPGITPEALCILLRYLKTPT 643 >gi|329942441|ref|ZP_08291251.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Chlamydophila psittaci Cal10] gi|332287082|ref|YP_004421983.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Chlamydophila psittaci 6BC] gi|313847678|emb|CBY16666.1| putative division protein a [Chlamydophila psittaci RD1] gi|325506475|gb|ADZ18113.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Chlamydophila psittaci 6BC] gi|328815351|gb|EGF85339.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Chlamydophila psittaci Cal10] gi|328914316|gb|AEB55149.1| glucose-inhibited division protein A [Chlamydophila psittaci 6BC] Length = 611 Score = 521 bits (1343), Expect = e-146, Method: Compositional matrix adjust. Identities = 281/619 (45%), Positives = 384/619 (62%), Gaps = 22/619 (3%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAGCEAA +AK+GAS +++ TI +SCNPA+GG+GKGH+VREIDA Sbjct: 7 NYDVIVVGAGHAGCEAAFCSAKMGASVLILSSNLDTIAKLSCNPAVGGIGKGHIVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G+M V D +GIQFR+LN KGPAVR PR Q D+++Y + M+R + S L ++QG V Sbjct: 67 LGGIMAEVTDQSGIQFRILNQTKGPAVRAPRAQVDKQMYHIHMKRLLESCPGLHIMQGTV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 +N+I + ++ TV+L++GTF+RG+IHIG L P GR+GD + L Sbjct: 127 ESLLDNENVIQGVTTKEGIAYLGKTVILSSGTFMRGLIHIGDLNFPGGRLGDPAATGLSL 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR--QIECGI 242 + + F RLKTGTP RL +I + TE+Q D + F ++ Q+ C I Sbjct: 187 ALKERGFPISRLKTGTPPRLLASSIDFSVTEEQPGDPG-VGFVHRSEPFVPPLPQVSCYI 245 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T T +T II NI SA+Y G I+ GPRYCPSIEDKIV+F ++ H IF+EPEG++T Sbjct: 246 THTTEKTKEIIAANIHRSALYGGRIEGIGPRYCPSIEDKIVKFADKERHHIFIEPEGIHT 305 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 VY NG+ST++P ++Q+ IR++ GLE I RP YAIEYDY++ ++PTLE+K I G Sbjct: 306 QEVYVNGLSTSMPFDVQYDMIRSVRGLENAIITRPAYAIEYDYVHGNVIYPTLESKLIEG 365 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LFL GQINGTTGYEEAAAQGL+AGIN+ K K SR +SYIGVM+DDLT++ + E Sbjct: 366 LFLCGQINGTTGYEEAAAQGLIAGINAVNKVLKKPAFVPSRQESYIGVMLDDLTTQILDE 425 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF--AKYIQEYNFLRSLLKS 480 PYRMFT RAE+R+ LR DNA RL+ G LG + + R + F K I E LR Sbjct: 426 PYRMFTGRAEHRLLLRQDNACLRLSHYGHDLGLLSKERYEIFEHQKQIIEEEKLR----- 480 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAY-EFLSYPDFSIQNLFSICP-DARKFSSLVIERLQI 538 LS T FK+ G + + + L P+ S L P D R + S + L++ Sbjct: 481 -------LSKT---FKKYGNSVVSLAKALCRPEVSYDALKEAFPEDVRDYGSTLNASLEM 530 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E YA Y RQ + E +IP+D DY S+ +LS E +EKL+ P + AS+I Sbjct: 531 EIKYAGYIDRQKALIHSLSKSENMIIPEDIDYQSISSLSLEAREKLAKFTPRTIGSASRI 590 Query: 599 EGMTPAALNLLLIYIKKNT 617 G+ A + +L++ +KK+ Sbjct: 591 SGIACADIQVLMVAVKKHA 609 >gi|239613167|gb|EEQ90154.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ajellomyces dermatitidis ER-3] Length = 698 Score = 521 bits (1343), Expect = e-146, Method: Compositional matrix adjust. Identities = 285/636 (44%), Positives = 396/636 (62%), Gaps = 24/636 (3%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDV+VIGGGHAG EA A AA+LGA TAL+T S IG SCNP+IGG+GKG ++REID Sbjct: 36 QPYDVVVIGGGHAGSEACAAAARLGARTALVTPSRSNIGVCSCNPSIGGIGKGTMIREID 95 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDG+ G+V D AGIQFR+LN KG AV GPR Q DR LY+ M E+ + L +++G+ Sbjct: 96 ALDGVAGKVTDKAGIQFRILNRSKGEAVWGPRAQIDRVLYQKNMLEELSNTPGLSIVEGK 155 Query: 124 VAGFNTEKNI--------ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMG 175 V K+ I + ++ +I V++TTGTFL G IHIG P+GRMG Sbjct: 156 VGDIIVSKDHSPEGSQGKIVGVRLESGEVIPTGRVIITTGTFLGGEIHIGLESFPSGRMG 215 Query: 176 DSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT- 234 ++ + L S + F GRLKTGTP RLD KTI + + Q D +PFS++ ++ Sbjct: 216 EAATFGLSKSLREAGFKLGRLKTGTPPRLDKKTIDFSNLQVQPGDSPPVPFSYLNKRVDV 275 Query: 235 --NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQ 292 Q+ C T TN H+I+ +N+ S +K GPRYCPS+E KI+RF ++ H Sbjct: 276 NDEDQLPCWSTYTNEAAHQIVRDNLDKSIHIRETVK--GPRYCPSLESKIIRFKDKQRHM 333 Query: 293 IFLEPEGLN-TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKEL 351 I+LEPEG +V+YPNGIS +P + Q +RT+ GLE V++++ GY +EYDY++P+ L Sbjct: 334 IWLEPEGFEPNEVIYPNGISMTIPADAQLAMLRTVAGLENVHMLQAGYGVEYDYVDPRSL 393 Query: 352 FPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 PTLETK ISGL+LAGQ+NGTTGYEEAA QG++AGIN+ S SR+DS+IG+M Sbjct: 394 RPTLETKLISGLYLAGQVNGTTGYEEAAGQGVLAGINAGLASKGKPPFTLSRSDSFIGIM 453 Query: 412 IDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEY 471 IDDL +KGV EPYRMFTSR+EYRIS R DNAD RLT G ++G +G++R + F++ ++ Sbjct: 454 IDDLITKGVSEPYRMFTSRSEYRISTRSDNADLRLTARGREVGAVGDKRWEHFSQVQEQV 513 Query: 472 NFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLF-SICPDARK--- 527 L++LL++ S + + D R+A++ L D SI ++ I P + K Sbjct: 514 TELQTLLENTKFPSTLWARKGFAVHCDHNPRSAFDLLRLRDVSIDDIIPHIEPPSSKGGK 573 Query: 528 ------FSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELK 581 F + R+ IE YA Y A+ + +E L+P D +YS + LS E + Sbjct: 574 AYTTSSFPPEIKYRVSIEGRYAPYVTMHEARARSFEKDEALLLPPDMNYSLITGLSTEER 633 Query: 582 EKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNT 617 L ++P ++ A +IEGMTP A LL+Y++KNT Sbjct: 634 AALERVRPESIGMARRIEGMTPVAALKLLVYVRKNT 669 >gi|327354760|gb|EGE83617.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ajellomyces dermatitidis ATCC 18188] Length = 698 Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust. Identities = 285/636 (44%), Positives = 396/636 (62%), Gaps = 24/636 (3%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDV+VIGGGHAG EA A AA+LGA TAL+T S IG SCNP+IGG+GKG ++REID Sbjct: 36 QPYDVVVIGGGHAGSEACAAAARLGARTALVTPSRSNIGVCSCNPSIGGIGKGTMIREID 95 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDG+ G+V D AGIQFR+LN KG AV GPR Q DR LY+ M E+ + L +++G+ Sbjct: 96 ALDGVAGKVTDKAGIQFRILNRSKGEAVWGPRAQIDRVLYQKNMLEELSNTPGLSIVEGK 155 Query: 124 VAGFNTEKNI--------ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMG 175 V K+ I + ++ +I V++TTGTFL G IHIG P+GRMG Sbjct: 156 VGDIIVSKDHSPEGSQGKIVGVRLESGEVIPTGRVIITTGTFLGGEIHIGLESFPSGRMG 215 Query: 176 DSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT- 234 ++ + L S + F GRLKTGTP RLD KTI + + Q D +PFS++ ++ Sbjct: 216 EAATFGLSKSLREAGFKLGRLKTGTPPRLDKKTIDFSNLQVQPGDSPPVPFSYLNKRVDV 275 Query: 235 --NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQ 292 Q+ C T TN H+I+ +N+ S +K GPRYCPS+E KI+RF ++ H Sbjct: 276 NDEDQLPCWSTYTNEAAHQIVRDNLDKSIHIRETVK--GPRYCPSLESKIIRFKDKQRHM 333 Query: 293 IFLEPEGLN-TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKEL 351 I+LEPEG +V+YPNGIS +P + Q +RT+ GLE V++++ GY +EYDY++P+ L Sbjct: 334 IWLEPEGFEPNEVIYPNGISMTIPADAQLAMLRTVAGLENVHMLQAGYGVEYDYVDPRSL 393 Query: 352 FPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 PTLETK ISGL+LAGQ+NGTTGYEEAA QG++AGIN+ S SR+DS+IG+M Sbjct: 394 RPTLETKLISGLYLAGQVNGTTGYEEAAGQGVLAGINAGLASKGKPPFTLSRSDSFIGIM 453 Query: 412 IDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEY 471 IDDL +KGV EPYRMFTSR+EYRIS R DNAD RLT G ++G +G++R + F++ ++ Sbjct: 454 IDDLITKGVSEPYRMFTSRSEYRISTRSDNADLRLTARGREVGVVGDKRWEHFSQVQEQV 513 Query: 472 NFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARK--- 527 L++LL++ S + + D R+A++ L D SI ++ I P + K Sbjct: 514 TELQTLLENTKFPSTLWARKGFAVHCDHSPRSAFDLLRLRDVSIDDIIPHIEPPSSKGGK 573 Query: 528 ------FSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELK 581 F + R+ IE YA Y A+ + +E L+P D +YS + LS E + Sbjct: 574 AYTTSSFPPEIKYRVSIEGRYAPYVTMHEARARSFEKDEALLLPPDMNYSLITGLSTEER 633 Query: 582 EKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNT 617 L ++P ++ A +IEGMTP A LL+Y++KNT Sbjct: 634 AALERVRPESIGMARRIEGMTPVAALKLLVYVRKNT 669 >gi|240124404|ref|ZP_04737360.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria gonorrhoeae PID332] Length = 642 Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust. Identities = 286/622 (45%), Positives = 389/622 (62%), Gaps = 14/622 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 19 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 78 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R+QADR LY+ +++ + +QENLD+ Q Sbjct: 79 ALGGAMALATDKSGIQFRRLNASKGAAVRATRSQADRILYKASIREMLENQENLDLFQQA 138 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E IS ++ + + VVLT GTFL G IHIG GR GD + SL Sbjct: 139 VEDVTLEGERISGVITAMGAEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 198 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT----DKITNRQIE 239 + GRLKTGTP R+DG+TI + + +Q D P M+ ++ RQ+ Sbjct: 199 GRLRELKLPQGRLKTGTPPRIDGRTIDFSQLTEQPGD---TPVPVMSVRGNAEMHPRQVS 255 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEG Sbjct: 256 CWITHTNTQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEG 315 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 316 LTTHEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKT 375 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG N+ + D + R +Y+GV++DDL +KG Sbjct: 376 IEGLFFAGQINGTTGYEEAAAQGLLAGANAVQYVRGQDPLLLRREQAYLGVLVDDLITKG 435 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 + EPYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + + LK Sbjct: 436 LNEPYRMFTSRAEYRLQLREDNADMRLTEDGYKIGLVGEAQWRMFNEKREAVEREIQRLK 495 Query: 480 SLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI---CPDARKFSSLVI 533 + T + L+ + ++ + ++ L P+ L ++ P R S+ V+ Sbjct: 496 TTWYTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGAIPSER-LSAEVV 554 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I+ Y Y RQ E + E +P DY + LS E+++KL+ KP + Sbjct: 555 EQVEIQVKYQGYIDRQNEEIDSRRDIETLKLPDGIDYGRVKGLSAEVQQKLNQHKPETVG 614 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I G+TPAA+ LL++++K+ Sbjct: 615 QASRISGVTPAAVALLMVHLKR 636 >gi|121634068|ref|YP_974313.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria meningitidis FAM18] gi|120865774|emb|CAM09503.1| glucose inhibited division protein A [Neisseria meningitidis FAM18] Length = 631 Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust. Identities = 285/621 (45%), Positives = 388/621 (62%), Gaps = 12/621 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 8 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 67 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY+ ++ + +QENLD+ Q Sbjct: 68 ALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKATIREMLENQENLDLFQQA 127 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + IS +V + VVLT GTFL G IHIG GR GD + SL Sbjct: 128 VEDVTLDGERISGVVTAMGVEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 187 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK----ITNRQIE 239 + + GRLKTGTP R+DG+TI + + +Q D P M+ + + RQ+ Sbjct: 188 GRLRELNLPQGRLKTGTPPRIDGRTIDFSQLTEQPGD---TPVPVMSVRGSADMHPRQVS 244 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEG Sbjct: 245 CWITHTNTQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEG 304 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 305 LTTHEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKT 364 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG N+ + + D + R +Y+GV++DDL +KG Sbjct: 365 IQGLFFAGQINGTTGYEEAAAQGLLAGANAVQYVREQDPLLLRREQAYLGVLVDDLITKG 424 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 V EPYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + + LK Sbjct: 425 VNEPYRMFTSRAEYRLQLREDNADMRLTEDGYKIGLVGEAQWRMFNEKREAIEREIQRLK 484 Query: 480 SLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI--CPDARKFSSLVIE 534 + T + L+ + ++ + ++ L P+ L ++ + + S+ V+E Sbjct: 485 TTWYTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGAMPSERLSAEVVE 544 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E + E +P DY + LS E+++KL+ KP + Q Sbjct: 545 QVEIQVKYQGYIDRQNEEIDSRRDIETLKLPDGIDYGKVKGLSAEVQQKLNQHKPETVGQ 604 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G+TPAA+ LL++++K+ Sbjct: 605 ASRISGVTPAAVALLMVHLKR 625 >gi|115386316|ref|XP_001209699.1| mitochondrial translation optimization protein [Aspergillus terreus NIH2624] gi|114190697|gb|EAU32397.1| mitochondrial translation optimization protein [Aspergillus terreus NIH2624] Length = 685 Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust. Identities = 280/635 (44%), Positives = 387/635 (60%), Gaps = 23/635 (3%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 +R YDV+VIGGGHAG EA A AA+ GA TALIT S IG SCNP+ GG+GKG ++RE+ Sbjct: 35 SRPYDVVVIGGGHAGSEACAAAARSGARTALITPSLSNIGVCSCNPSFGGIGKGTMIREV 94 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DA+DG+ GR+ D AGI FR+LN KGPAV GPR Q DR+LY+ MQ E+ E L +++G Sbjct: 95 DAMDGVAGRIIDKAGIMFRILNRSKGPAVWGPRAQIDRDLYKKYMQEELTGTEGLSIVEG 154 Query: 123 EVAGFNTEKNIISSIV----------MQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAG 172 +VA K I I ++ +I VV+TTGTFL G IHIG P+G Sbjct: 155 KVADIVVSKEGIEDIPGAQGKIVGVRLESGEIIPTGRVVITTGTFLGGEIHIGLKVFPSG 214 Query: 173 RMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK 232 RMG++ + L S + F GRLKTGTP RLD KTI + E Q D PFS++ + Sbjct: 215 RMGEAATFGLSKSLREAGFQLGRLKTGTPPRLDKKTINFAALEVQRGDSPPQPFSYLNNT 274 Query: 233 IT---NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERN 289 + Q+ C +T TN H II N+ S ++ GPRYCPS+E KI+RF +++ Sbjct: 275 VQVGDEGQLTCWMTHTNEAAHDIIRANLDKSVHIRETVR--GPRYCPSLESKIIRFKDKH 332 Query: 290 GHQIFLEPEGLN-TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINP 348 H I+LEPEG DV+YPNGIS +PE+ Q +RT+ GLE V +++PGY +EYDYI+P Sbjct: 333 RHLIWLEPEGFAPNDVIYPNGISMTVPEDAQFAMLRTVRGLENVRMLQPGYGVEYDYIDP 392 Query: 349 KELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYI 408 + L+P+LETK ISGL+LAGQINGTTGYEEAA QG++AG N+ + + +R+D +I Sbjct: 393 RNLWPSLETKLISGLYLAGQINGTTGYEEAAGQGIIAGTNAGLSAQGRPPLTLTRSDGFI 452 Query: 409 GVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYI 468 G+MIDDL +KGV EPYRMFT+R+EYRIS R DNAD RLT + K G + ++R F Sbjct: 453 GIMIDDLITKGVSEPYRMFTTRSEYRISTRSDNADLRLTRMARKAGIVSDKRWHHFTDTE 512 Query: 469 QEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLF-------SI 521 + L++LL + ++S S + D R+A + L + + L + Sbjct: 513 AQIQELQTLLANTRMSSSAWSRRGFKARTDTSIRSALDLLCLDEVDVDALIPHIESPSGV 572 Query: 522 CPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELK 581 F+ + R+ IE YA Y RQ A++ +E L+P DYS + +S E + Sbjct: 573 AYTPASFAPEIRTRVAIERRYAPYIARQETAARKFLQDENLLLPAGLDYSKVQGISTEER 632 Query: 582 EKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKN 616 + L ++P ++ A +IEG+TPA LL +++K+ Sbjct: 633 QALERVRPLSVGMARRIEGVTPAGALRLLAHVRKH 667 >gi|269302401|gb|ACZ32501.1| glucose-inhibited division protein A [Chlamydophila pneumoniae LPCoLN] Length = 611 Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust. Identities = 281/621 (45%), Positives = 380/621 (61%), Gaps = 26/621 (4%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAGCEAA +AK+GAS ++T TI +SCNPA+GG+GKGH+VREIDA Sbjct: 7 AYDVIVVGAGHAGCEAAYCSAKMGASVLMLTSNLDTIAKLSCNPAVGGIGKGHIVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G+M V D +GIQFR+LN KGPAVR PR Q D++LY + M+R + + L ++Q V Sbjct: 67 LGGIMAEVTDQSGIQFRILNQTKGPAVRAPRAQVDKQLYHIHMKRLLENTPGLHIMQATV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 ++ +IS + ++ M TVVL++GTF+RG+IHIG GR+GD S L Sbjct: 127 ESLLDKEGVISGVTTKEGWMFSGKTVVLSSGTFMRGLIHIGDRNFSGGRLGDPSSQGLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFAD------ERLIPFSFMTDKITNRQI 238 K F RLKTGTP RL +I + E+Q D R PF + Q+ Sbjct: 187 DLKKRGFPISRLKTGTPPRLLASSINFSCMEEQPGDLGVGFVHRTEPF-----QPPLPQL 241 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C IT T +T II N+ SA+Y G I+ GPRYCPSIEDKIV+F ++ H +FLEPE Sbjct: 242 SCFITHTTEKTKEIISANLHRSALYGGCIEGVGPRYCPSIEDKIVKFSDKERHHVFLEPE 301 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL+T +Y NG+ST++P ++Q+ IR++ GLE I RP YAIEYDYI+ + PTLE+K Sbjct: 302 GLHTQEIYANGLSTSMPFDVQYDMIRSVLGLENAIITRPAYAIEYDYIHGNVIHPTLESK 361 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I GLFL GQINGTTGYEEAAAQGL+AGIN+ K SR +SYIGVM+DDLT++ Sbjct: 362 LIEGLFLCGQINGTTGYEEAAAQGLIAGINAVNKVFNKPPFIPSRQESYIGVMLDDLTTQ 421 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 + EPYRMFT RAE+R+ LR DNA RL+ G +LG + E R + K Q Sbjct: 422 ILDEPYRMFTGRAEHRLLLRQDNACARLSHYGYELGLLSEERYELVKKQNQ--------- 472 Query: 479 KSLVLTSKNLSSTSISFKQDGKTRTAY-EFLSYPDFSIQNLFSICP-DARKFSSLVIERL 536 L + +F+Q G++ + + LS P+ S L P D R +++ L Sbjct: 473 ----LLEEEKVRLQKTFRQYGQSVVSLAKALSRPEVSYDMLREAFPNDIRDLGTVLNASL 528 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 ++E Y+ Y RQ I + ++ E LIP+D DY + ALS E +EKL+ P L AS Sbjct: 529 EMEIKYSGYIDRQKILIQSLEKAESLLIPEDLDYKQITALSLEAQEKLAKFTPRTLGSAS 588 Query: 597 KIEGMTPAALNLLLIYIKKNT 617 +I G+ A + +L+I +KK+ Sbjct: 589 RISGIASADIQVLMIALKKHA 609 >gi|205375718|sp|A1KRM5|MNMG_NEIMF RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A Length = 628 Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust. Identities = 285/621 (45%), Positives = 388/621 (62%), Gaps = 12/621 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 5 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY+ ++ + +QENLD+ Q Sbjct: 65 ALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKATIREMLENQENLDLFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + IS +V + VVLT GTFL G IHIG GR GD + SL Sbjct: 125 VEDVTLDGERISGVVTAMGVEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK----ITNRQIE 239 + + GRLKTGTP R+DG+TI + + +Q D P M+ + + RQ+ Sbjct: 185 GRLRELNLPQGRLKTGTPPRIDGRTIDFSQLTEQPGD---TPVPVMSVRGSADMHPRQVS 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEG Sbjct: 242 CWITHTNTQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 302 LTTHEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKT 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG N+ + + D + R +Y+GV++DDL +KG Sbjct: 362 IQGLFFAGQINGTTGYEEAAAQGLLAGANAVQYVREQDPLLLRREQAYLGVLVDDLITKG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 V EPYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + + LK Sbjct: 422 VNEPYRMFTSRAEYRLQLREDNADMRLTEDGYKIGLVGEAQWRMFNEKREAIEREIQRLK 481 Query: 480 SLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI--CPDARKFSSLVIE 534 + T + L+ + ++ + ++ L P+ L ++ + + S+ V+E Sbjct: 482 TTWYTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGAMPSERLSAEVVE 541 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E + E +P DY + LS E+++KL+ KP + Q Sbjct: 542 QVEIQVKYQGYIDRQNEEIDSRRDIETLKLPDGIDYGKVKGLSAEVQQKLNQHKPETVGQ 601 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G+TPAA+ LL++++K+ Sbjct: 602 ASRISGVTPAAVALLMVHLKR 622 >gi|222530700|ref|YP_002574582.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Caldicellulosiruptor bescii DSM 6725] gi|222457547|gb|ACM61809.1| glucose inhibited division protein A [Caldicellulosiruptor bescii DSM 6725] Length = 628 Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust. Identities = 274/616 (44%), Positives = 387/616 (62%), Gaps = 10/616 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV V+G GHAG EAA +A+LG T + ++G+M CNP+IGG GKGHLVREIDAL Sbjct: 8 YDVAVVGAGHAGIEAALASARLGLKTIIFAINLDSVGNMPCNPSIGGTGKGHLVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ ADA IQ R+LN KGPAV R Q DR YRL M+R + +QENLD+ Q EV Sbjct: 68 GGEMGKAADATAIQVRILNRAKGPAVYSLRAQCDRSRYRLYMKRVLENQENLDIRQAEVC 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + ++ VVL TGTFL G + +G+ +G G P+ L + Sbjct: 128 EVLVEDGRVKGVKITTGAVFLAKAVVLATGTFLGGRVIVGETVFDSGPDGMHPARYLTEN 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNRQIECGITR 244 K + R KTGTPAR+ +++ + K + Q DE+ +PFSF D Q+ C +T Sbjct: 188 LKKLGIEMMRFKTGTPARVHRRSLDFSKMQIQPGDEKPLPFSFENEDNFNIEQVPCYLTY 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETHRII EN+ + +++G I GPRYCPSIEDKIVRF ++ HQ+F+EP G++TD Sbjct: 248 TTEETHRIIRENLHRAPLFTGLISGVGPRYCPSIEDKIVRFADKPRHQVFIEPTGIDTDE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+ST+LPE++Q + R++ GLE V I+RP YAIEYD INP +L PTL+ KKI GLF Sbjct: 308 MYVQGMSTSLPEDVQVKMYRSVIGLENVKIMRPAYAIEYDCINPLQLEPTLQFKKIKGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAAAQG++AGIN+A + + R+ +YIGV+IDDL +KG EPY Sbjct: 368 SAGQINGTSGYEEAAAQGIIAGINAAMYVKGKEMLILDRSQAYIGVLIDDLVTKGTNEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLR---SLLKSL 481 R+ TSRAEYR+ LR DNAD RLT IG K+G I Q+R+ K++Q+ + + +K+ Sbjct: 428 RIMTSRAEYRLILRQDNADLRLTEIGYKIGLIS---QQRYEKFLQKKKMIEDEINRVKNT 484 Query: 482 VLTSKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 ++ + + K T + L P+ S ++L I + V + ++I Sbjct: 485 IIAPSEKVNKLLLQKGSSPISTGVRLSDLLKRPELSYEDLKEIDINRPDLPWYVQDEVEI 544 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E Y Y +Q+ ++ K E + IP+ DY+ + LS E K+KLS +KP ++ QAS+I Sbjct: 545 EIKYEGYIKKQLERIEQFKKLENKKIPEWVDYNKIAGLSTEAKQKLSQIKPASIGQASRI 604 Query: 599 EGMTPAALNLLLIYIK 614 G++PA +++LLI+++ Sbjct: 605 SGVSPADISVLLIWLE 620 >gi|62184767|ref|YP_219552.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Chlamydophila abortus S26/3] gi|81170534|sp|Q5L6Z0|MNMG_CHLAB RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|62147834|emb|CAH63580.1| putative division protein a [Chlamydophila abortus S26/3] Length = 611 Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust. Identities = 281/619 (45%), Positives = 384/619 (62%), Gaps = 22/619 (3%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAGCEAA +AK+GAS +++ TI +SCNPA+GG+GKGH+VREIDA Sbjct: 7 NYDVIVVGAGHAGCEAAFCSAKMGASVLILSSNLDTIAKLSCNPAVGGIGKGHIVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G+M V D +GIQFR+LN KGPAVR PR Q D+++Y + M+R + S L ++QG V Sbjct: 67 LGGIMAEVTDQSGIQFRILNQTKGPAVRAPRAQVDKQMYHIHMKRLLESSPGLHIMQGTV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 +N+I + ++ TV+L++GTF+RG+IHIG L P GR+GD + L Sbjct: 127 ESLLDNENVIQGVTTKEGITYLGKTVILSSGTFMRGLIHIGDLNFPGGRLGDPAATGLSL 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR--QIECGI 242 + + F RLKTGTP RL +I + TE+Q D + F ++ Q+ C I Sbjct: 187 ALKERGFPISRLKTGTPPRLLASSIDFSVTEEQPGDPG-VGFVHRSEPFVPPLPQVSCYI 245 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T T +T II NI SA+Y G I+ GPRYCPSIEDKIV+F ++ H IF+EPEG++T Sbjct: 246 THTTEKTKDIIAANIHRSALYGGRIEGIGPRYCPSIEDKIVKFADKERHHIFIEPEGIHT 305 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 VY NG+ST++P ++Q+ IR++ GLE I RP YAIEYDY++ ++PTLE+K I G Sbjct: 306 QEVYVNGLSTSMPFDVQYDMIRSVLGLENAIITRPAYAIEYDYVHGNVIYPTLESKLIEG 365 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LFL GQINGTTGYEEAAAQGL+AGIN+ K K SR +SYIGVM+DDLT++ + E Sbjct: 366 LFLCGQINGTTGYEEAAAQGLIAGINAVNKVLKKPAFIPSRQESYIGVMLDDLTTQILDE 425 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF--AKYIQEYNFLRSLLKS 480 PYRMFT RAE+R+ LR DNA RL+ G LG + + R + F K I E LR Sbjct: 426 PYRMFTGRAEHRLLLRQDNACLRLSHYGRDLGLLSKERYEIFENQKQIIEEEKLR----- 480 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAY-EFLSYPDFSIQNLFSICP-DARKFSSLVIERLQI 538 LS T FK+ G + + + L P+ S L P D R + S + L++ Sbjct: 481 -------LSKT---FKKYGNSVVSLAKALCRPEVSYDTLREAFPEDIRDYGSTLNASLEM 530 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E YA Y RQ + E +IP+D DY S+ +LS E +EKL+ P + AS+I Sbjct: 531 EIKYAGYIDRQKALIHSLSKSENMVIPEDIDYQSISSLSLEAREKLAKFTPRTIGSASRI 590 Query: 599 EGMTPAALNLLLIYIKKNT 617 G+ A + +L++ +KK+ Sbjct: 591 SGIACADIQVLMVAVKKHA 609 >gi|268683031|ref|ZP_06149893.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Neisseria gonorrhoeae PID332] gi|268623315|gb|EEZ55715.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Neisseria gonorrhoeae PID332] Length = 631 Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust. Identities = 286/622 (45%), Positives = 389/622 (62%), Gaps = 14/622 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 8 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 67 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R+QADR LY+ +++ + +QENLD+ Q Sbjct: 68 ALGGAMALATDKSGIQFRRLNASKGAAVRATRSQADRILYKASIREMLENQENLDLFQQA 127 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E IS ++ + + VVLT GTFL G IHIG GR GD + SL Sbjct: 128 VEDVTLEGERISGVITAMGAEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 187 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT----DKITNRQIE 239 + GRLKTGTP R+DG+TI + + +Q D P M+ ++ RQ+ Sbjct: 188 GRLRELKLPQGRLKTGTPPRIDGRTIDFSQLTEQPGD---TPVPVMSVRGNAEMHPRQVS 244 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEG Sbjct: 245 CWITHTNTQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEG 304 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 305 LTTHEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKT 364 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG N+ + D + R +Y+GV++DDL +KG Sbjct: 365 IEGLFFAGQINGTTGYEEAAAQGLLAGANAVQYVRGQDPLLLRREQAYLGVLVDDLITKG 424 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 + EPYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + + LK Sbjct: 425 LNEPYRMFTSRAEYRLQLREDNADMRLTEDGYKIGLVGEAQWRMFNEKREAVEREIQRLK 484 Query: 480 SLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI---CPDARKFSSLVI 533 + T + L+ + ++ + ++ L P+ L ++ P R S+ V+ Sbjct: 485 TTWYTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGAIPSER-LSAEVV 543 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I+ Y Y RQ E + E +P DY + LS E+++KL+ KP + Sbjct: 544 EQVEIQVKYQGYIDRQNEEIDSRRDIETLKLPDGIDYGRVKGLSAEVQQKLNQHKPETVG 603 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I G+TPAA+ LL++++K+ Sbjct: 604 QASRISGVTPAAVALLMVHLKR 625 >gi|312136219|ref|YP_004003557.1| glucose inhibited division protein a [Caldicellulosiruptor owensensis OL] gi|311776270|gb|ADQ05757.1| glucose inhibited division protein A [Caldicellulosiruptor owensensis OL] Length = 628 Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust. Identities = 274/616 (44%), Positives = 386/616 (62%), Gaps = 10/616 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV V+G GHAG EAA +A+LG T + +IG+M CNP+IGG GKGHLVREIDAL Sbjct: 8 YDVAVVGAGHAGIEAALASARLGLKTIIFAINLDSIGNMPCNPSIGGTGKGHLVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ ADA IQ R+LN KGPAV R Q DR YRL M+R + +QENLD+ Q EV Sbjct: 68 GGEMGKAADATAIQVRILNRAKGPAVYSLRAQCDRYRYRLYMKRVLENQENLDIRQAEVC 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + ++ VVL TGTFL G + IG+ +G G P+ L + Sbjct: 128 DVLVEDGRVKGVKITTGAIFLAKAVVLATGTFLGGKVIIGQTIFDSGPDGMHPARYLTEN 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNRQIECGITR 244 K + R KTGTPAR+ +++ + + + Q D + +PFSF D Q+ C +T Sbjct: 188 LKKLGIEMMRFKTGTPARVHRRSLDFSQMQIQPGDLKPLPFSFENEDNFNIEQVPCYLTY 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETH+II EN+ + +++G I GPRYCPSIEDKIVRF ++ HQ+F+EP GL+TD Sbjct: 248 TTEETHKIIRENLHRAPLFTGIISGVGPRYCPSIEDKIVRFADKPRHQVFIEPTGLDTDE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+ST+LPE++Q + R++ GLE V I+RP YAIEYD INP +L PTL+ KKI GLF Sbjct: 308 MYVQGMSTSLPEDVQIKMYRSVIGLENVKIMRPAYAIEYDCINPIQLEPTLQFKKIKGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAAAQG++AGIN+A + + R+ +YIGV+IDDL +KG EPY Sbjct: 368 SAGQINGTSGYEEAAAQGIIAGINAAMYVKGKEMLVLDRSQAYIGVLIDDLVTKGTNEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLR---SLLKSL 481 R+ TSRAEYR+ LR DNAD RLT IG K+G + +R+ K++Q+ + + +K+ Sbjct: 428 RIMTSRAEYRLILRQDNADLRLTEIGYKIGLVS---SQRYEKFLQKKKMIEDEINRVKNT 484 Query: 482 VLTSKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 V+ + + K T + L P+ S ++L I PD V + ++I Sbjct: 485 VIAPSEKVNKFLQEKGSSPISTGVKLSDLLKRPELSYEDLKEIDPDRPDLPWYVQDEVEI 544 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E Y Y +Q+ + ++ K E + IP DY+ + LS E K+KLS ++P ++ QAS+I Sbjct: 545 EIKYEGYIKKQLAQIEQFKKLENKKIPDWVDYNQILGLSTEAKQKLSQIRPASIGQASRI 604 Query: 599 EGMTPAALNLLLIYIK 614 G++PA +++LLI+++ Sbjct: 605 SGVSPADISVLLIWLE 620 >gi|268604574|ref|ZP_06138741.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Neisseria gonorrhoeae PID1] gi|268588705|gb|EEZ53381.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Neisseria gonorrhoeae PID1] Length = 631 Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust. Identities = 285/621 (45%), Positives = 388/621 (62%), Gaps = 12/621 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 8 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 67 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R+QADR LY+ +++ + +QENLD+ Q Sbjct: 68 ALGGAMALATDKSGIQFRRLNASKGAAVRATRSQADRILYKASIREMLENQENLDLFQQA 127 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E IS ++ + + VVLT GTFL G IHIG GR GD + SL Sbjct: 128 VEDVTLEGERISGVITAMGAEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 187 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT----DKITNRQIE 239 + GRLKTGTP R+DG+TI + + +Q D P M+ ++ RQ+ Sbjct: 188 GRLRELKLPQGRLKTGTPPRIDGRTIDFSQLTEQPGD---TPVPVMSVRGNAEMHPRQVS 244 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEG Sbjct: 245 CWITHTNTQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEG 304 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 305 LTTHEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKT 364 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG N+ + D + R +Y+GV++DDL +KG Sbjct: 365 IEGLFFAGQINGTTGYEEAAAQGLLAGANAVQYVRGQDPLLLRREQAYLGVLVDDLITKG 424 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 + EPYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + + LK Sbjct: 425 LNEPYRMFTSRAEYRLQLREDNADMRLTEDGYKIGLVGEAQWRMFNEKREAVEREIQRLK 484 Query: 480 SLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI--CPDARKFSSLVIE 534 + T + L+ + ++ + ++ L P+ L ++ + S+ VIE Sbjct: 485 TTWYTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGAMPSENLSAEVIE 544 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E + E +P DY + LS E+++KL+ KP + Q Sbjct: 545 QVEIQVKYQGYIDRQNEEIDSRRDIETLKLPDGIDYGRVKGLSAEVQQKLNQHKPETVGQ 604 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G+TPAA+ LL++++K+ Sbjct: 605 ASRISGVTPAAVALLMVHLKR 625 >gi|224372353|ref|YP_002606725.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Nautilia profundicola AmH] gi|223588715|gb|ACM92451.1| glucose-inhibited division protein A [Nautilia profundicola AmH] Length = 623 Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust. Identities = 275/615 (44%), Positives = 377/615 (61%), Gaps = 5/615 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DVIV+GGGHAG EAA A++G L+T IG+ SCNPAIGGL KGHLV+EID Sbjct: 2 KEFDVIVVGGGHAGIEAALAPARMGKKVLLLTMLVEQIGAASCNPAIGGLAKGHLVKEID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D AGIQFRVLN +GPAVRG R Q D + YR+ M+ L+ NL V Q Sbjct: 62 ALGGEMALATDHAGIQFRVLNENRGPAVRGSRAQIDMDRYRIYMRTVCLNTPNLTVAQEI 121 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + + + + + ++LTTGTF+RG++H G +K+ GR + P+ + Sbjct: 122 VDEILVKNGKVVGVKTNLLNEYKTKALILTTGTFMRGIMHFGPVKLEGGRFHELPAKKIS 181 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--NRQIECG 241 S F RLKTGT AR+D +TI + K E Q DE PFSF TDK T Q+ C Sbjct: 182 KSLEDLGFKLERLKTGTTARIDARTIDFSKMEIQPGDENPKPFSFRTDKKTFNPTQLPCY 241 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT TN TH II N + +++G I+ GPRYCPSIEDK+ +F ++ H +F+EP+ L Sbjct: 242 ITYTNENTHDIIKSNFHRAPLFTGQIEGVGPRYCPSIEDKLNKFPDKERHHVFVEPQTLE 301 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 Y NG+ST+LP ++Q FI +IPGLE I+R GYAIEYD+I P L +LETK+I Sbjct: 302 ATEYYLNGLSTSLPMDVQEDFIHSIPGLENAKIVRFGYAIEYDFIQPTNLKHSLETKEIE 361 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQINGTTGYEEAAAQG++AGIN+A K + + I F R ++YIGV+IDDL +KG Sbjct: 362 GLFFAGQINGTTGYEEAAAQGIMAGINAALKIDGKEPIIFRRDEAYIGVLIDDLVTKGTN 421 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSR+EYR+ LR DNA RL G +LG + ++ +R K +E N +L Sbjct: 422 EPYRMFTSRSEYRLLLREDNAILRLADYGYELGILDDKTYERVQKLREEINRGMKILNET 481 Query: 482 VLTSKNLSSTSISFKQDGKTRTAYEFLSYP---DFSIQNLFSICPDARKFSSLVIERLQI 538 +T + + + K ++ E F+ + L + P+ + FS +E++ I Sbjct: 482 FVTPNKQINAMLEEMGEEKIQSKMEIRKIAGRHTFNREKLLKLAPEFKDFSEDALEQILI 541 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 ++ Y Y RQ + ++K IP+DF+Y +P LS E+ EKL +P L AS+I Sbjct: 542 DARYHHYIERQKAQIDKMKEMLSVKIPEDFEYKGIPGLSREIVEKLEKFRPPTLFAASEI 601 Query: 599 EGMTPAALNLLLIYI 613 G+TPAA++++ +YI Sbjct: 602 SGVTPAAIDIIHMYI 616 >gi|146418878|ref|XP_001485404.1| hypothetical protein PGUG_03133 [Meyerozyma guilliermondii ATCC 6260] Length = 703 Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust. Identities = 276/646 (42%), Positives = 402/646 (62%), Gaps = 32/646 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 + V+VIGGGHAGCEAA +A+ G T LIT S IG+ SCNP++GG+GKG L+RE+DAL Sbjct: 55 HPVVVIGGGHAGCEAATGSARSGTPTTLITPDISKIGTASCNPSMGGVGKGTLLREVDAL 114 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DG+ ++ D AGI F++LN KG AV GPR Q DR +Y MQ+ IL+ NL V++ EV Sbjct: 115 DGVALKITDKAGIHFKILNASKGAAVHGPRAQIDRSIYLKEMQKTILNYPNLTVLEAEVK 174 Query: 126 GF---NTEKNI----------ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAG 172 + E N I +V+ D+ ++ CS VV+TTGTFL IHIG PAG Sbjct: 175 DIIIEDVETNSSDFTGRKYGSIVGVVLGDSRVLSCSKVVVTTGTFLSAEIHIGLESFPAG 234 Query: 173 RMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK 232 RMG++ + L +F + F GRLKTGTP RL +TI ++ +Q +D P S+M+ K Sbjct: 235 RMGENATFGLSKTFKEAGFRLGRLKTGTPPRLSSRTIRYEGLSEQKSDYPPAPMSYMSLK 294 Query: 233 I--TNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNG 290 + ++ + C IT T E H++I +N+ S +K GPRYCPSIE KI++F ++ Sbjct: 295 VDLQDQLVSCHITFTTAEMHKLIADNLDKSIHIKETVK--GPRYCPSIESKIIKFPQKTS 352 Query: 291 HQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKE 350 H ++LEPEGL+TD+VYPNGIS +P E+Q + ++ +PG E V +++PGY +EYD+++P+E Sbjct: 353 HMVWLEPEGLDTDLVYPNGISCTMPHELQEKLVKLMPGCEDVKMVQPGYGVEYDFVDPRE 412 Query: 351 LFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGV 410 L TLETK + GL+LAGQINGTTGYEEAAAQG +AGIN+ + R+D Y+GV Sbjct: 413 LRQTLETKLVDGLYLAGQINGTTGYEEAAAQGCLAGINAGLSLAGKPPLIVQRSDGYLGV 472 Query: 411 MIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQE 470 ++DDL +KGV EPYRMFTSR+E+RIS+R DNAD RLT G G + E R K + + Sbjct: 473 LVDDLITKGVEEPYRMFTSRSEFRISIRSDNADKRLTEKGYLAGVVSEERYKHYKNEMNN 532 Query: 471 YNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTA----YEFLSYPDFSIQNLFSICPD-- 524 ++ ++S L+S+ L+ + + D RTA ++ LSY D ++ L P Sbjct: 533 FDAIKSFLQSVSLSGARWAPALKGTELD-VNRTAVVDGWKLLSYRDVDLELLMKSLPQIV 591 Query: 525 ---ARKFSSL---VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPAL-- 576 F S+ ++ R+ +ES+Y + ++ + K +E L+PK+F Y++ L Sbjct: 592 GDLPPVFDSINPRLLNRIDVESTYEPWMKKEEAHLRAYKADENLLLPKNFVYNNEGNLKI 651 Query: 577 SNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVKLNE 622 S E+ L+ ++P + QA +I+G+TPAA+ L +K N +L + Sbjct: 652 SYEVCHLLNTIQPKTIGQARRIQGVTPAAIFELFKLVKGNQSQLAQ 697 >gi|240017490|ref|ZP_04724030.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria gonorrhoeae FA6140] gi|240118867|ref|ZP_04732929.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria gonorrhoeae PID1] gi|260439595|ref|ZP_05793411.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria gonorrhoeae DGI2] Length = 642 Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust. Identities = 284/618 (45%), Positives = 388/618 (62%), Gaps = 6/618 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 19 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 78 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R+QADR LY+ +++ + +QENLD+ Q Sbjct: 79 ALGGAMALATDKSGIQFRRLNASKGAAVRATRSQADRILYKASIREMLENQENLDLFQQA 138 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E IS ++ + + VVLT GTFL G IHIG GR GD + SL Sbjct: 139 VEDVTLEGERISGVITAMGAEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 198 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + GRLKTGTP R+DG+TI + + +Q D + S + ++ RQ+ C I Sbjct: 199 GRLRELKLPQGRLKTGTPPRIDGRTIDFSQLTEQPGDTPVPVMSVRGNAEMHPRQVSCWI 258 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEGL T Sbjct: 259 THTNTQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEGLTT 318 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK I G Sbjct: 319 HEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKTIEG 378 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AG N+ + D + R +Y+GV++DDL +KG+ E Sbjct: 379 LFFAGQINGTTGYEEAAAQGLLAGANAVQYVRGQDPLLLRREQAYLGVLVDDLITKGLNE 438 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + + LK+ Sbjct: 439 PYRMFTSRAEYRLQLREDNADMRLTEDGYKIGLVGEAQWRMFNEKREAVEREIQRLKTTW 498 Query: 483 LTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI--CPDARKFSSLVIERLQ 537 T + L+ + ++ + ++ L P+ L ++ + S+ VIE+++ Sbjct: 499 YTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGAMPSENLSAEVIEQVE 558 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ Y Y RQ E + E +P DY + LS E+++KL+ KP + QAS+ Sbjct: 559 IQVKYQGYIDRQNEEIDSRRDIETLKLPDGIDYGRVKGLSAEVQQKLNQHKPETVGQASR 618 Query: 598 IEGMTPAALNLLLIYIKK 615 I G+TPAA+ LL++++K+ Sbjct: 619 ISGVTPAAVALLMVHLKR 636 >gi|312623583|ref|YP_004025196.1| glucose inhibited division protein a [Caldicellulosiruptor kronotskyensis 2002] gi|312204050|gb|ADQ47377.1| glucose inhibited division protein A [Caldicellulosiruptor kronotskyensis 2002] Length = 628 Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust. Identities = 275/616 (44%), Positives = 387/616 (62%), Gaps = 10/616 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV V+G GHAG EAA +A+LG T + ++G+M CNP+IGG GKGHLVREIDAL Sbjct: 8 YDVAVVGAGHAGIEAALASARLGLKTIIFAINLDSVGNMPCNPSIGGTGKGHLVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ ADA IQ R+LN KGPAV R Q DR YRL M+R + +QENLDV Q EV Sbjct: 68 GGEMGKAADATAIQVRILNRAKGPAVYSLRAQCDRSRYRLYMKRVLENQENLDVRQAEVC 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + ++ VVL TGTFL G + IG+ +G G P+ L + Sbjct: 128 EVLVEDGRVKGVKITTGAVFLAKAVVLATGTFLGGRVIIGETVFDSGPDGMHPARYLTEN 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNRQIECGITR 244 K + R KTGTPAR+ +++ + K + Q DE+ +PFSF D Q+ C +T Sbjct: 188 LKKLGIEMMRFKTGTPARVHRRSLDFSKMQIQPGDEKPLPFSFENEDNFIIEQVPCYLTY 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETHRII EN+ + +++G I GPRYCPSIEDKIVRF ++ HQ+F+EP G++TD Sbjct: 248 TTEETHRIIRENLHRAPLFTGLISGVGPRYCPSIEDKIVRFADKPRHQVFIEPTGIDTDE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+ST+LPE++Q + R++ GLE V I+RP YAIEYD INP +L PTL+ KKI GLF Sbjct: 308 MYVQGMSTSLPEDVQVKMYRSVIGLENVKIMRPAYAIEYDCINPLQLEPTLQFKKIKGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAAAQG++AGIN+A + + R+ +YIGV+IDDL +KG EPY Sbjct: 368 SAGQINGTSGYEEAAAQGIIAGINAAMYVKGKEMLILDRSQAYIGVLIDDLVTKGTNEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLR---SLLKSL 481 R+ TSRAEYR+ LR DNAD RLT IG K+G I Q+R+ K++Q+ + + +K+ Sbjct: 428 RIMTSRAEYRLILRQDNADLRLTEIGYKIGLIS---QQRYEKFLQKKKMIEDEINRVKNT 484 Query: 482 VLTSKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 ++ + + K T + L P+ S ++L I + V + ++I Sbjct: 485 IIAPSEKVNKLLLQKGSSPISTGVRLSDLLKRPELSYEDLKEIDINRPDLPWYVQDEVEI 544 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E Y Y +Q+ ++ K E + IP+ DY+ + LS E K+KLS ++P ++ QAS+I Sbjct: 545 EIKYEGYIKKQLERIEQFKKLENKKIPEWVDYNKIAGLSTEAKQKLSQIRPASIGQASRI 604 Query: 599 EGMTPAALNLLLIYIK 614 G++PA +++LLI+++ Sbjct: 605 SGVSPADISVLLIWLE 620 >gi|302892829|ref|XP_003045296.1| hypothetical protein NECHADRAFT_100996 [Nectria haematococca mpVI 77-13-4] gi|256726221|gb|EEU39583.1| hypothetical protein NECHADRAFT_100996 [Nectria haematococca mpVI 77-13-4] Length = 1205 Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust. Identities = 281/627 (44%), Positives = 398/627 (63%), Gaps = 15/627 (2%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 +R +DV+VIGGGHAG EA A AA+ GA TALIT K +G+ SCNP+ GG+GKG ++REI Sbjct: 571 HRPFDVVVIGGGHAGAEACAAAARAGARTALITPKVDNLGTCSCNPSFGGIGKGTIIREI 630 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DALDGL GR+ D AG+QF VLN +KG AV GPR Q DR+LY+ M+ E+ S NL ++ Sbjct: 631 DALDGLAGRIIDKAGVQFHVLNRRKGAAVWGPRAQIDRDLYKKYMREELSSYPNLSIVLD 690 Query: 123 EVAGF--------NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRM 174 V+ + + I+ + ++ ++ S V++TTGTFL G IHIG PAGR+ Sbjct: 691 SVSDIVLSDQEPVDGASSRIAGVRLESGQVLPTSKVIITTGTFLGGEIHIGLECYPAGRI 750 Query: 175 GDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT 234 G++ + L S F GRLKTGTP R+ +I +D EKQ+ D+ PFS++ D + Sbjct: 751 GEAATFGLSKSLRDAGFQLGRLKTGTPPRIARDSIKFDILEKQYGDDPPSPFSYLNDTVA 810 Query: 235 -NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQI 293 Q+ CG+T TN +TH+I+ +N++ + IK GPRYCPS+E K++RF +++ H + Sbjct: 811 VEEQLTCGVTYTNEKTHQIVRDNLEKTIHIRETIK--GPRYCPSLESKVIRFADKDRHIV 868 Query: 294 FLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFP 353 +LEPEG ++ +VYPNG+S +P E Q Q +RTIPGLE +++PGY +EYDYI+P+ L Sbjct: 869 WLEPEGFDSPIVYPNGLSMTIPAEAQEQALRTIPGLEDSKMLQPGYGVEYDYIDPRGLRS 928 Query: 354 TLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMID 413 TLETK ISGL+LAGQINGTTGYEEAA QG++AGIN+ R + L + SR D YIG+M+D Sbjct: 929 TLETKAISGLYLAGQINGTTGYEEAAGQGVLAGINAGRAAKGLPGVSLSRGDGYIGIMVD 988 Query: 414 DLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNF 473 DL +KGV EPYRMFTSR+E+R++ R DNAD RLT G + G I ++R ++ Q+ + Sbjct: 989 DLITKGVTEPYRMFTSRSEFRMAARADNADFRLTSKGHEWGVISDKRWSVYSDERQQMDD 1048 Query: 474 LRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFL----SYPDFSIQNLFSICPDARKFS 529 L L+S+ L+ K++ R + L S ++ L S+ PD +S Sbjct: 1049 LTKALRSVSLSPAQWIEKGFHLKRNTARRDGLDMLRLSSSNTRIELEQLVSVVPDIMNYS 1108 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 V R+ IE+ YA Y Q E + +E+ IP DY +P L+ KE L + +P Sbjct: 1109 PRVRSRVAIEAFYAPYIKMQEAERSQFTNDERVRIPTSLDYDEIPGLAISEKEALKVARP 1168 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKKN 616 L QA ++EG+TP+ LL Y+++N Sbjct: 1169 ETLAQARRVEGVTPSGSLRLLAYVRRN 1195 >gi|254805763|ref|YP_003083984.1| glucose inhibited division protein A [Neisseria meningitidis alpha14] gi|254669305|emb|CBA08296.1| glucose inhibited division protein A [Neisseria meningitidis alpha14] Length = 642 Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust. Identities = 286/621 (46%), Positives = 386/621 (62%), Gaps = 12/621 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 19 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 78 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY+ A++ + +QENLD+ Q Sbjct: 79 ALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKAAIREMLENQENLDLFQQA 138 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + IS ++ + VVLT GTFL G IHIG GR GD + SL Sbjct: 139 VEDVTLDGERISGVITAMGVEFKARAVVLTAGTFLSGKIHIGLEHYEGGRAGDPAAKSLG 198 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT----DKITNRQIE 239 + GRLKTGTP R+DG+TI + + +Q D P M+ ++ RQ+ Sbjct: 199 GRLRELKLPQGRLKTGTPPRIDGRTIDFSQLTEQPGD---TPVPVMSVRGNAEMHPRQVS 255 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEG Sbjct: 256 CWITHTNTQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEG 315 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 316 LTTHEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKT 375 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG N+ + D + R +Y+GV++DDL +KG Sbjct: 376 IEGLFFAGQINGTTGYEEAAAQGLLAGANAVQYVRGQDPLLLRREQAYLGVLVDDLITKG 435 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 V EPYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + + LK Sbjct: 436 VNEPYRMFTSRAEYRLQLREDNADMRLTEDGYKIGLVGEAQWRMFNEKREAVEREIQRLK 495 Query: 480 SLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI--CPDARKFSSLVIE 534 + T + L+ + ++ + ++ L P+ L ++ + S+ VIE Sbjct: 496 TTWYTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGAMPSENLSAEVIE 555 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E + E +P DY + LS E+++KL+ KP + Q Sbjct: 556 QVEIQVKYQGYIDRQNEEIDSRRDIETLKLPDGIDYGKVKGLSAEVQQKLNQHKPETVGQ 615 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G+TPAA+ LL++++K+ Sbjct: 616 ASRISGVTPAAVALLMVHLKR 636 >gi|239907242|ref|YP_002953983.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Desulfovibrio magneticus RS-1] gi|239797108|dbj|BAH76097.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Desulfovibrio magneticus RS-1] Length = 623 Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust. Identities = 280/618 (45%), Positives = 373/618 (60%), Gaps = 3/618 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M + ++D+IVIG GHAGCEAA AA+LG T L+T IG +SCNPAIGGL KGH+VR Sbjct: 1 MTSMTFDIIVIGAGHAGCEAAMAAARLGHKTLLLTQNVDRIGHLSCNPAIGGLAKGHMVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G+MG ADAAGIQFR LN KGPAVR R Q DR+ Y ++R++ +QENL V Sbjct: 61 EIDALGGMMGLWADAAGIQFRTLNTSKGPAVRATRAQIDRDEYMRVVKRDVFAQENLTVR 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q E +S + + + V++TTGTFL G+IHIG ++ GR+GD PS+ Sbjct: 121 QDSAEDILAEAGRVSGLRVASGEIFATRAVIVTTGTFLGGLIHIGLTQLRGGRLGDPPSD 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 L S + GRLKTGT RL K+I + T Q D FSF Q+ C Sbjct: 181 GLPASLRRHGLIFGRLKTGTTPRLLAKSIDFSVTVPQPGDTPPPGFSFHGPGPVLPQVPC 240 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +T TN TH I + S +++G I+ G RYCPS+EDK+ RF ER+ H +FLEPEGL Sbjct: 241 YLTHTNARTHEAIRAGFERSPLFTGVIQGTGARYCPSVEDKVARFPERDRHHVFLEPEGL 300 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + +YPNGIST+LP E Q I TIPGLE I+RPGYAIEYDY +P +L PTLETK + Sbjct: 301 ESPEIYPNGISTSLPIETQKAMIATIPGLENAVIVRPGYAIEYDYADPVQLSPTLETKAL 360 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GL+LAGQINGT+GYEEAAAQGL A +N+ + R +Y+ V++DDL +KG Sbjct: 361 PGLYLAGQINGTSGYEEAAAQGLWASLNACLALSGRPPFLLRRDQAYMAVLVDDLVTKGT 420 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF-AKYIQEYNFLRSLLK 479 EPYRMFTSRAE+R+ LR NAD RLT +G ++G +GE + R+ AK L L + Sbjct: 421 SEPYRMFTSRAEHRLLLREGNADARLTALGREIGLVGEAQWARYQAKEASIAQALAGLAE 480 Query: 480 SLVLTS--KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 V + + ++ K ++ E L P ++ +LF P+ + + + Sbjct: 481 RRVRPGDCDDAAWEALGGKPAERSLRLDELLRRPAVTLPDLFRFWPELAELPAEAAVEAE 540 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 Y Y RQ A E +P+D DY+++ LS E+ EKL + P +L QAS+ Sbjct: 541 TRVKYDGYLKRQEELAGRAGRHEGVELPQDLDYAAVAGLSREVVEKLIRVAPRSLGQASR 600 Query: 598 IEGMTPAALNLLLIYIKK 615 I G+TPAA++ L I++KK Sbjct: 601 ISGVTPAAVSCLEIHLKK 618 >gi|194099972|ref|YP_002003111.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria gonorrhoeae NCCP11945] gi|193935262|gb|ACF31086.1| glucose-inhibited division protein A [Neisseria gonorrhoeae NCCP11945] Length = 655 Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust. Identities = 285/619 (46%), Positives = 389/619 (62%), Gaps = 8/619 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 32 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 91 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R+QADR LY+ +++ + +QENLD+ Q Sbjct: 92 ALGGAMALATDKSGIQFRRLNASKGAAVRATRSQADRILYKASIREMLENQENLDLFQQA 151 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E IS ++ + + VVLT GTFL G IHIG GR GD + SL Sbjct: 152 VEDVTLEGERISGVITAMGAEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 211 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + GRLKTGTP R+DG+TI + + +Q D + S + ++ RQ+ C I Sbjct: 212 GRLRELKLPQGRLKTGTPPRIDGRTIDFSQLTEQPGDTPVPVMSVRGNAEMHPRQVSCWI 271 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEGL T Sbjct: 272 THTNTQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEGLTT 331 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK I G Sbjct: 332 HEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKTIEG 391 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AG N+ + D + R +Y+GV++DDL +KG+ E Sbjct: 392 LFFAGQINGTTGYEEAAAQGLLAGANAVQYVRGQDPLLLRREQAYLGVLVDDLITKGLNE 451 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + + LK+ Sbjct: 452 PYRMFTSRAEYRLQLREDNADMRLTEDGYKIGLVGEAQWRMFNEKREAVEREIQRLKTTW 511 Query: 483 LTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI---CPDARKFSSLVIERL 536 T + L+ + ++ + ++ L P+ L ++ P R S+ V+E++ Sbjct: 512 YTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGAIPSER-LSAEVVEQV 570 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y Y RQ E + E +P DY + LS E+++KL+ KP + QAS Sbjct: 571 EIQVKYQGYIDRQNEEIDSRRDIETLKLPDGIDYGRVKGLSAEVQQKLNQHKPETVGQAS 630 Query: 597 KIEGMTPAALNLLLIYIKK 615 +I G+TPAA+ LL++++K+ Sbjct: 631 RISGVTPAAVALLMVHLKR 649 >gi|103488331|ref|YP_617892.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Sphingopyxis alaskensis RB2256] gi|122984730|sp|Q1GP63|MNMG_SPHAL RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|98978408|gb|ABF54559.1| glucose inhibited division protein A [Sphingopyxis alaskensis RB2256] Length = 619 Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust. Identities = 284/615 (46%), Positives = 401/615 (65%), Gaps = 2/615 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+GGGHAG EAAA AA+LGA AL++ + IG+MSCNPAIGGLGKGHL+RE+DA Sbjct: 6 TFDVIVVGGGHAGTEAAAAAARLGARVALVSFDPTLIGTMSCNPAIGGLGKGHLMREVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDG M R ADAA I +R+LN KG AV+GPR QADR+LYR A+Q + ++E + V+ GE Sbjct: 66 LDGWMARAADAAAIHYRMLNASKGAAVQGPRIQADRKLYRAAIQTLLAAEEGITVVAGEA 125 Query: 125 AGFN-TEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 A + I+ + + D + + VVL TGTFL G + G+ ++ GR+G++ S+ L Sbjct: 126 AALRLSNGGRIAGLDLADGTALTARAVVLATGTFLGGRLFRGEERMEGGRIGEAGSHRLA 185 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 RLKTGTP RLDG+TI W + ++Q +D S + T QI C IT Sbjct: 186 GQLRAAHLPMARLKTGTPPRLDGRTIDWARLQEQPSDGGRWTCSTWNNARTVPQIFCAIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 RTN E+HRII EN+ S +++G I + GPRYCPSIEDKI RF +R+GHQ+FLEPEGL+T Sbjct: 246 RTNAESHRIIAENLHRSPLFTGAIGAAGPRYCPSIEDKIHRFADRDGHQVFLEPEGLDTH 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +VYPNGIST+LP ++Q +RTI GLE V ++ PGYA+EYD+I+P+ L TL+ + + G+ Sbjct: 306 LVYPNGISTSLPADVQLAMLRTIEGLEAVEMVVPGYAVEYDHIDPRALDRTLQVRAMPGV 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGTTGYEEAAAQGLVAG N+A + + R++SYIGVM+DDL +GV EP Sbjct: 366 WCAGQINGTTGYEEAAAQGLVAGANAALAVQGREPLILDRSESYIGVMVDDLVLQGVTEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRM T+RAEYR+ LR DNA RLTP G+ LG + FA+ + E +LL++ V Sbjct: 426 YRMLTARAEYRLRLRADNAATRLTPKGIALGLVRPATAALFARRMAERARAGALLEAPVA 485 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 T+ + + + DG R + L +P +++ L + P+ ++ + ++ YA Sbjct: 486 TA-DYGAIGLPLPGDGIARRRIDLLRFPGATVERLTILVPEIESIDRAILSEVVEDAHYA 544 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y R E + + E L+ DY+++ LS E+ E+LS +P L QA++I+G+TP Sbjct: 545 PYIARHEAELRALAANEAILLDPALDYAAIGGLSREMVERLSKARPETLGQAARIDGVTP 604 Query: 604 AALNLLLIYIKKNTV 618 AAL ++++ ++ Sbjct: 605 AALTAIMVHSRRRAA 619 >gi|85860875|ref|YP_463077.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Syntrophus aciditrophicus SB] gi|85723966|gb|ABC78909.1| putative tRNA (5-carboxymethylaminomethyl-2-thiouridylate) synthase subunit [Syntrophus aciditrophicus SB] Length = 661 Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust. Identities = 276/626 (44%), Positives = 379/626 (60%), Gaps = 16/626 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R +DVIV+G GHAGCEAA A+++G T L +I MSCNPAIGGL KG LV+EID Sbjct: 24 RQFDVIVVGAGHAGCEAALAASRMGCETLLFNINLDSIALMSCNPAIGGLAKGQLVKEID 83 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G MGR+AD + FR+LN KGPAV+ R Q D++LYRLAM+ + Q L + Q Sbjct: 84 ALGGEMGRMADKTAVHFRILNASKGPAVQSSRVQCDKQLYRLAMKSVVERQPKLHLFQSL 143 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + I+ + Q VV+TTGTFL G++H+G PAGR G+ S SL Sbjct: 144 VDCLLVKDGQITGVADQTGVCFGAKAVVITTGTFLNGLVHVGTSHYPAGRAGEIASISLA 203 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 N K F+ GR+KTGTP RL TI + + E+Q +D PFS T+++ ++ Sbjct: 204 NCLRKMGFEMGRMKTGTPPRLKASTIDFSRLERQDSDPAFEPFSLSTERLGKERLPSYFG 263 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 T ETHR+I +NI+ S +YSG IK RYCPS+EDK++RF ++ H + LE EGL T+ Sbjct: 264 YTTSETHRLIRDNIRFSPLYSGVIKGVSARYCPSLEDKVMRFADKGRHPVVLEFEGLETE 323 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ +LP ++Q Q + ++PGLE I+R YAIEYD++ P +L TLETK++ GL Sbjct: 324 EVYAKGLGNSLPLDLQEQIVHSVPGLENSEILRSAYAIEYDFVQPTQLNHTLETKRVRGL 383 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 +LAGQINGT+GYEEAAAQG+ AGIN+A R+++Y+GV+IDDL ++GV EP Sbjct: 384 YLAGQINGTSGYEEAAAQGMWAGINAALAVQGRPPFVLDRSEAYMGVLIDDLVTQGVDEP 443 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL-- 481 YRMFTSRAEYR+ LR DNA RLTP G LG I + ++ ++ I+ L S Sbjct: 444 YRMFTSRAEYRLILREDNAALRLTPRGFDLGLIPQDLHEQISERIRRIEEGMKCLSSFKI 503 Query: 482 ----VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNL--FSICPDARK-----FSS 530 + SK S + K T ++ L D S ++L F PD + + Sbjct: 504 YPGTAVNSKLEEHGSPAIK---NPVTLFQLLKRTDLSWEDLSMFQDLPDFPEDVPDGYDR 560 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 ++ ++++IE+ Y Y RQ +K E R IP DYS++P LSNEL+ KL+ ++P Sbjct: 561 MIRKQIEIEAKYEGYIQRQREAVVRMKALESRRIPPGMDYSAIPGLSNELRMKLARVEPE 620 Query: 591 NLLQASKIEGMTPAALNLLLIYIKKN 616 + QA +I GMT AAL ++I IKK Sbjct: 621 TIGQARRITGMTQAALAAVMIMIKKK 646 >gi|325141207|gb|EGC63707.1| glucose-inhibited division protein A [Neisseria meningitidis CU385] Length = 628 Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust. Identities = 286/621 (46%), Positives = 386/621 (62%), Gaps = 12/621 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L++H T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 5 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLSHNIETLGQMSCNPSIGGIGKGHLVRELD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY+ A++ + +QENLD+ Q Sbjct: 65 ALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKAAIREMLENQENLDLFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E IS ++ + VVLT GTFL G IHIG GR GD + SL Sbjct: 125 VEDVTLEGERISGVITAMGVEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK----ITNRQIE 239 + GRLKTGTP R+DG+TI + + +Q D P M+ + + RQ+ Sbjct: 185 GRLRELKLPQGRLKTGTPPRIDGRTIDFSQLTEQPGD---TPVPVMSVRGNADMHPRQVS 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEG Sbjct: 242 CWITHTNTQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 302 LTTHEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKT 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG N+ + D + R +Y+GV++DDL +KG Sbjct: 362 IEGLFFAGQINGTTGYEEAAAQGLLAGANAVQYVRGQDPLLLRREQAYLGVLVDDLITKG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 V EPYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + + LK Sbjct: 422 VNEPYRMFTSRAEYRLQLREDNADMRLTEDGYKIGLVGEAQWRMFNEKREAVEREIQRLK 481 Query: 480 SLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI--CPDARKFSSLVIE 534 + T + L+ + ++ + ++ L P+ L ++ + S+ VIE Sbjct: 482 TTWYTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGAMPSENLSAEVIE 541 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E + E +P DY + LS E+++KL+ KP + Q Sbjct: 542 QVEIQVKYQGYIDRQNEEIDSRRDIETLKLPDGIDYGKVKGLSAEVQQKLNQHKPETVGQ 601 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G+TPAA+ LL++++K+ Sbjct: 602 ASRISGVTPAAVALLMVHLKR 622 >gi|261400118|ref|ZP_05986243.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria lactamica ATCC 23970] gi|269210351|gb|EEZ76806.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria lactamica ATCC 23970] Length = 631 Score = 520 bits (1339), Expect = e-145, Method: Compositional matrix adjust. Identities = 284/621 (45%), Positives = 388/621 (62%), Gaps = 12/621 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L++H T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 8 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLSHNIETLGQMSCNPSIGGIGKGHLVRELD 67 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY+ A++ + +QENLD+ Q Sbjct: 68 ALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKAAIREMLENQENLDLFQQA 127 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + IS ++ + VVLT GTFL G IHIG GR GD + SL Sbjct: 128 VEDVTLDGERISGVITAMGVEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 187 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT----DKITNRQIE 239 + GRLKTGTP R+DG+TI + + +Q D P M+ ++ RQ+ Sbjct: 188 GRLRELKLPQGRLKTGTPPRIDGRTIDFSQLTEQPGD---TPVPIMSVRGSAEMHPRQVS 244 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEG Sbjct: 245 CWITHTNTQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEG 304 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 305 LTTHEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKT 364 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG N+ + + D + R +Y+GV++DDL +KG Sbjct: 365 IEGLFFAGQINGTTGYEEAAAQGLLAGANAVQYVREQDPLLLRREQAYLGVLVDDLITKG 424 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 V EPYRMFTSRAEYR+ LR DNAD RLT G K+G + E + + F + + LK Sbjct: 425 VNEPYRMFTSRAEYRLQLREDNADMRLTEDGRKIGLVSEAQWRMFNEKREAVEREIQRLK 484 Query: 480 SLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI--CPDARKFSSLVIE 534 + T + L+ + ++ + ++ L P+ L ++ + + ++ VIE Sbjct: 485 TTWYTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGAMPSERLAAEVIE 544 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E + E +P D DY + LS E+++KL+ KP + Q Sbjct: 545 QVEIQVKYQGYIDRQNEEIDSRRDIETLKLPDDIDYGKVKGLSAEVQQKLNQHKPETVGQ 604 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G+TPAA+ LL++++K+ Sbjct: 605 ASRISGVTPAAVALLMVHLKR 625 >gi|225016767|ref|ZP_03705959.1| hypothetical protein CLOSTMETH_00679 [Clostridium methylpentosum DSM 5476] gi|224950435|gb|EEG31644.1| hypothetical protein CLOSTMETH_00679 [Clostridium methylpentosum DSM 5476] Length = 628 Score = 520 bits (1339), Expect = e-145, Method: Compositional matrix adjust. Identities = 274/622 (44%), Positives = 389/622 (62%), Gaps = 18/622 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAG EAA +A+LG TAL T I +M CNP+IGG KGHLVREIDA Sbjct: 7 AYDVIVVGAGHAGVEAALASARLGMRTALFTISLDQISNMPCNPSIGGTAKGHLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ ADA +Q R+LN KGPAV R QADR Y M++ + +Q+NLD+ QGEV Sbjct: 67 LGGEMGKAADATFLQSRMLNRGKGPAVHSLRVQADRMKYHALMKQTVEAQDNLDLRQGEV 126 Query: 125 AGFN-TEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 E N ++S+V + ++ V+L GT+L G IH+G+ G G + +L Sbjct: 127 VDVRLDENNNVTSVVTKLGAVFEAKAVILACGTYLNGTIHVGEASYTGGPDGALAATTLT 186 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + K R KTGTPAR+ ++I + E+Q D+ ++PFSF T Q++C I Sbjct: 187 YNLEKLGVKLRRFKTGTPARVHRRSIDFSVLEEQCGDDPIVPFSFETTGKLENQVKCYIA 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN ETHR+I EN+ S +Y+G I+ GPRYCPSIEDK+VRF ++ HQ+F+EP GL+TD Sbjct: 247 YTNEETHRVIRENLHRSPLYAGRIEGVGPRYCPSIEDKVVRFPDKLRHQLFVEPMGLDTD 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G+S++LPE++Q QF+RTI GLE+V I+R YAIEYD +P +L PTLE +I GL Sbjct: 307 EIYLQGMSSSLPEDVQIQFLRTIRGLERVEIMRTAYAIEYDCCDPLQLLPTLELIQIGGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQ NGT+GYEEAAAQGL+AGIN+A K + R SYIG +IDDL +KG +P Sbjct: 367 YGAGQFNGTSGYEEAAAQGLIAGINAALKIQGKEPFVLDRASSYIGTLIDDLVTKGCSDP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF----------AKYIQEYNF 473 YRM TSR+EYR+ LR DNAD RLTP+G +LG I E+R ++F K I++ N Sbjct: 427 YRMMTSRSEYRLILRQDNADQRLTPLGYQLGLISEQRYQQFLNKLELIQQEKKRIRKANI 486 Query: 474 LRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVI 533 S + L S+ S + K + + P +L + V Sbjct: 487 GPSEQLNEFLVSRGTSPLTTGTK-------LADLIRRPQIRYIDLAPFDGERPPLPFEVA 539 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++IE Y Y RQ+++ +E++ E++ + DY+++ L E +EKL+ +KP ++ Sbjct: 540 EQVEIELKYEGYIKRQLMQVEEMRKLEQKPLSAALDYTTIEGLRLEAQEKLNKVKPLSIG 599 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I G++PA +++LLI++++ Sbjct: 600 QASRISGVSPADVSVLLIWLEQ 621 >gi|205831577|sp|Q2LXU8|MNMG_SYNAS RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A Length = 639 Score = 520 bits (1339), Expect = e-145, Method: Compositional matrix adjust. Identities = 276/626 (44%), Positives = 379/626 (60%), Gaps = 16/626 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R +DVIV+G GHAGCEAA A+++G T L +I MSCNPAIGGL KG LV+EID Sbjct: 2 RQFDVIVVGAGHAGCEAALAASRMGCETLLFNINLDSIALMSCNPAIGGLAKGQLVKEID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G MGR+AD + FR+LN KGPAV+ R Q D++LYRLAM+ + Q L + Q Sbjct: 62 ALGGEMGRMADKTAVHFRILNASKGPAVQSSRVQCDKQLYRLAMKSVVERQPKLHLFQSL 121 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + I+ + Q VV+TTGTFL G++H+G PAGR G+ S SL Sbjct: 122 VDCLLVKDGQITGVADQTGVCFGAKAVVITTGTFLNGLVHVGTSHYPAGRAGEIASISLA 181 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 N K F+ GR+KTGTP RL TI + + E+Q +D PFS T+++ ++ Sbjct: 182 NCLRKMGFEMGRMKTGTPPRLKASTIDFSRLERQDSDPAFEPFSLSTERLGKERLPSYFG 241 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 T ETHR+I +NI+ S +YSG IK RYCPS+EDK++RF ++ H + LE EGL T+ Sbjct: 242 YTTSETHRLIRDNIRFSPLYSGVIKGVSARYCPSLEDKVMRFADKGRHPVVLEFEGLETE 301 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ +LP ++Q Q + ++PGLE I+R YAIEYD++ P +L TLETK++ GL Sbjct: 302 EVYAKGLGNSLPLDLQEQIVHSVPGLENSEILRSAYAIEYDFVQPTQLNHTLETKRVRGL 361 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 +LAGQINGT+GYEEAAAQG+ AGIN+A R+++Y+GV+IDDL ++GV EP Sbjct: 362 YLAGQINGTSGYEEAAAQGMWAGINAALAVQGRPPFVLDRSEAYMGVLIDDLVTQGVDEP 421 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL-- 481 YRMFTSRAEYR+ LR DNA RLTP G LG I + ++ ++ I+ L S Sbjct: 422 YRMFTSRAEYRLILREDNAALRLTPRGFDLGLIPQDLHEQISERIRRIEEGMKCLSSFKI 481 Query: 482 ----VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNL--FSICPDARK-----FSS 530 + SK S + K T ++ L D S ++L F PD + + Sbjct: 482 YPGTAVNSKLEEHGSPAIK---NPVTLFQLLKRTDLSWEDLSMFQDLPDFPEDVPDGYDR 538 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 ++ ++++IE+ Y Y RQ +K E R IP DYS++P LSNEL+ KL+ ++P Sbjct: 539 MIRKQIEIEAKYEGYIQRQREAVVRMKALESRRIPPGMDYSAIPGLSNELRMKLARVEPE 598 Query: 591 NLLQASKIEGMTPAALNLLLIYIKKN 616 + QA +I GMT AAL ++I IKK Sbjct: 599 TIGQARRITGMTQAALAAVMIMIKKK 624 >gi|291042834|ref|ZP_06568575.1| glucose-inhibited division protein A [Neisseria gonorrhoeae DGI2] gi|291013268|gb|EFE05234.1| glucose-inhibited division protein A [Neisseria gonorrhoeae DGI2] Length = 655 Score = 520 bits (1339), Expect = e-145, Method: Compositional matrix adjust. Identities = 284/618 (45%), Positives = 388/618 (62%), Gaps = 6/618 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 32 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 91 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R+QADR LY+ +++ + +QENLD+ Q Sbjct: 92 ALGGAMALATDKSGIQFRRLNASKGAAVRATRSQADRILYKASIREMLENQENLDLFQQA 151 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E IS ++ + + VVLT GTFL G IHIG GR GD + SL Sbjct: 152 VEDVTLEGERISGVITAMGAEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 211 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + GRLKTGTP R+DG+TI + + +Q D + S + ++ RQ+ C I Sbjct: 212 GRLRELKLPQGRLKTGTPPRIDGRTIDFSQLTEQPGDTPVPVMSVRGNAEMHPRQVSCWI 271 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEGL T Sbjct: 272 THTNTQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEGLTT 331 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK I G Sbjct: 332 HEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKTIEG 391 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AG N+ + D + R +Y+GV++DDL +KG+ E Sbjct: 392 LFFAGQINGTTGYEEAAAQGLLAGANAVQYVRGQDPLLLRREQAYLGVLVDDLITKGLNE 451 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + + LK+ Sbjct: 452 PYRMFTSRAEYRLQLREDNADMRLTEDGYKIGLVGEAQWRMFNEKREAVEREIQRLKTTW 511 Query: 483 LTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI--CPDARKFSSLVIERLQ 537 T + L+ + ++ + ++ L P+ L ++ + S+ VIE+++ Sbjct: 512 YTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGAMPSENLSAEVIEQVE 571 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ Y Y RQ E + E +P DY + LS E+++KL+ KP + QAS+ Sbjct: 572 IQVKYQGYIDRQNEEIDSRRDIETLKLPDGIDYGRVKGLSAEVQQKLNQHKPETVGQASR 631 Query: 598 IEGMTPAALNLLLIYIKK 615 I G+TPAA+ LL++++K+ Sbjct: 632 ISGVTPAAVALLMVHLKR 649 >gi|17534255|ref|NP_496169.1| hypothetical protein F52H3.2 [Caenorhabditis elegans] gi|2494737|sp|Q20680|YT32_CAEEL RecName: Full=Uncharacterized protein F52H3.2 gi|3877390|emb|CAA91322.1| C. elegans protein F52H3.2, confirmed by transcript evidence [Caenorhabditis elegans] Length = 638 Score = 520 bits (1339), Expect = e-145, Method: Compositional matrix adjust. Identities = 278/615 (45%), Positives = 391/615 (63%), Gaps = 11/615 (1%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALD 66 DVIVIGGGHAGCE+AA AA+ G++T L+T +TIG MSCNP+ GG+GKGHL+RE+DALD Sbjct: 18 DVIVIGGGHAGCESAAAAARCGSNTVLVTQNKNTIGEMSCNPSFGGIGKGHLIREVDALD 77 Query: 67 GLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAG 126 GL R+ D + I ++ LN +GPAV G R Q DR+LY+ MQ EI S + L++++GEVA Sbjct: 78 GLCARICDKSAITYQALNRAQGPAVLGLRAQIDRKLYKTQMQNEINSTKRLEILEGEVAE 137 Query: 127 FNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSF 186 E I I M + ++IR VV+TTGTFLR I+ G PAGR+G+ S+ L SF Sbjct: 138 LLVENGKIVGIRMMNETVIRTKCVVITTGTFLRAQIYQGMKTWPAGRIGEKSSDRLSESF 197 Query: 187 MKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT---NRQIECGIT 243 +K F+ GRL+TGTP RL +I + K E+ D IPFSF+T + Q+ + Sbjct: 198 LKHGFELGRLRTGTPPRLMKDSINFSKFERVAPDRTPIPFSFLTKNVWISYEDQLPTYLG 257 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN E RI EN+ + Y ++ PRYCPS+E K++RF + + H++FLE EGL++ Sbjct: 258 HTNDEVCRIGNENMHEN--YQVASETTSPRYCPSLESKLLRFPKLH-HRLFLEHEGLDSP 314 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YP G+S E+Q Q +R IPGLE V I +PGY ++YD++NPK+L TLET+K+ G+ Sbjct: 315 HIYPQGMSLTFKPEVQTQLLRAIPGLENVEIFQPGYGVQYDFVNPKQLKRTLETRKVEGM 374 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 FLAGQINGTTGYEEAAAQG+VAGIN++ ++ + SRT+ YIGV+IDDLTS G EP Sbjct: 375 FLAGQINGTTGYEEAAAQGVVAGINASARAQNEPGMEVSRTEGYIGVLIDDLTSLGTNEP 434 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFL----RSLLK 479 YRM TSRAE+R+ LRPDNAD RLT +G + I + R F + E N L + Sbjct: 435 YRMLTSRAEFRLYLRPDNADIRLTELGRRHNAISDNRWAIFTETKGELNNLTQRTEEMKM 494 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 S+V + + + + + DGK +A++ + D +L +C + ++ERL+IE Sbjct: 495 SMVKWKRIIPKLAATSRNDGKVLSAFDLIHRYDLDKSDL-ELCLKDKNIGEDILERLKIE 553 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y R + +EI E IP + D+S++ +S E EKL +P NL A++I Sbjct: 554 GRYQMEHERMKAKKQEIDRESATAIPDNTDFSTMRGMSLECIEKLERARPRNLAAATRIS 613 Query: 600 GMTPAALNLLLIYIK 614 G+TP A+ +L+ ++K Sbjct: 614 GITPEAIVVLMRHLK 628 >gi|332022778|gb|EGI63051.1| Protein MTO1-like protein, mitochondrial [Acromyrmex echinatior] Length = 804 Score = 520 bits (1339), Expect = e-145, Method: Compositional matrix adjust. Identities = 274/595 (46%), Positives = 387/595 (65%), Gaps = 14/595 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M +DVIV+GGGHAG EA+A A ++GA T L+T K STIG MSCNP+ GG+GKGHL+R Sbjct: 205 MNKTKFDVIVVGGGHAGTEASAAAVRMGAKTLLVTQKKSTIGEMSCNPSFGGIGKGHLMR 264 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DALDG+ R+ D +GI +RVLN KGPAV G R Q DR+LY+ +Q E+ + L + Sbjct: 265 EVDALDGVCCRICDISGIYYRVLNKSKGPAVWGLRAQIDRKLYKKHLQAELFNMPRLHIY 324 Query: 121 QGEVAGFNTEKNIISS--IVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSP 178 + V E + +S ++++D + + VV+TTGTFL+G I+IG K PAGR+ D P Sbjct: 325 ESSVENLILENDSLSCQGVILRDGTKMFGDAVVITTGTFLKGQINIGLEKRPAGRLNDEP 384 Query: 179 SNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT---N 235 S L N+ + F GRLKTGTP RL+ ++I + K D+ IPFSFM+D + + Sbjct: 385 SIGLANTLDRLGFRIGRLKTGTPPRLEKESIDFTKCTAYPPDDSPIPFSFMSDNVWLPPD 444 Query: 236 RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFL 295 +QI +T TN + +I+ +N+ + + +I GPRYCPSIE KI+RF HQI+L Sbjct: 445 KQILTHLTYTNEDVAKIVKDNMHCNLHVTEEIT--GPRYCPSIESKILRFKALK-HQIWL 501 Query: 296 EPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTL 355 EPEGL++ ++YP+G+S LPEE Q + ++ IPGLE +++PGY +EYDY++P+EL L Sbjct: 502 EPEGLDSPLIYPSGLSCTLPEEKQVELVKCIPGLENARLVKPGYGVEYDYVDPRELTTQL 561 Query: 356 ETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDL 415 ETKK+ GLFLAGQINGTTGYEEAAAQG++AG+N+A K K + SRT+ YIGV+IDDL Sbjct: 562 ETKKVPGLFLAGQINGTTGYEEAAAQGIIAGVNAAAKVFKKPPLLISRTEGYIGVLIDDL 621 Query: 416 TSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLR 475 T++G EPYRMFTSR+E+R+SLRPDNAD RLT G +GC+ R ++ + ++ + Sbjct: 622 TTEGTTEPYRMFTSRSEFRVSLRPDNADQRLTEKGYAIGCVSRERIEKTREVFRKMQEVV 681 Query: 476 SLLKSLVL-TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQ--NLFSICPDARKF--SS 530 +LKS V TSK + +D ++A++ LS D S+ L P S Sbjct: 682 QILKSDVRSTSKWRQLLKMKISKDTGYKSAFDMLSVTDESVTFAKLAKQLPQLGHLDGDS 741 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPA-LSNELKEKL 584 + R++IE+ Y +Q + +I+ E+ ++P D DY+S LSNE +EKL Sbjct: 742 GLARRIEIETKYVFAVAKQQGQVNDIRRNEQMIVPDDIDYNSPDLNLSNEDREKL 796 >gi|240015042|ref|ZP_04721955.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria gonorrhoeae DGI18] gi|240122110|ref|ZP_04735072.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria gonorrhoeae PID24-1] Length = 642 Score = 520 bits (1339), Expect = e-145, Method: Compositional matrix adjust. Identities = 284/621 (45%), Positives = 387/621 (62%), Gaps = 12/621 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP++GG+GKGHLVRE+D Sbjct: 19 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSVGGIGKGHLVRELD 78 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY+ +++ + +QENLD+ Q Sbjct: 79 ALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKASIREMLENQENLDLFQQA 138 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E IS ++ + + VVLT GTFL G IHIG GR GD + SL Sbjct: 139 VEDVTLEGERISGVITAMGAEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 198 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT----DKITNRQIE 239 + GRLKTGTP R+DG+TI + + +Q D P M+ ++ RQ+ Sbjct: 199 GRLRELKLPQGRLKTGTPPRIDGRTIDFSQLTEQPGD---TPVPVMSVRGNAEMHPRQVS 255 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEG Sbjct: 256 CWITHTNTQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEG 315 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 316 LTTHEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKT 375 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG N+ + D + R +Y+GV++DDL +KG Sbjct: 376 IEGLFFAGQINGTTGYEEAAAQGLLAGANAVQYVRGQDPLLLRREQAYLGVLVDDLITKG 435 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 + EPYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + + LK Sbjct: 436 LNEPYRMFTSRAEYRLQLREDNADMRLTEDGYKIGLVGEAQWRMFNEKREAVEREIQRLK 495 Query: 480 SLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI--CPDARKFSSLVIE 534 + T + L+ + ++ + ++ L P+ L ++ + S+ VIE Sbjct: 496 TTWYTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGAMPSENLSAEVIE 555 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E + E +P DY + LS E+++KL+ KP + Q Sbjct: 556 QVEIQVKYQGYIDRQNEEIDSRRDIETLKLPDGIDYGRVKGLSAEVQQKLNQHKPETVGQ 615 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G+TPAA+ LL++++K+ Sbjct: 616 ASRISGVTPAAVALLMVHLKR 636 >gi|119355878|ref|YP_910522.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Chlorobium phaeobacteroides DSM 266] gi|166222923|sp|A1BCG1|MNMG_CHLPD RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|119353227|gb|ABL64098.1| glucose inhibited division protein A [Chlorobium phaeobacteroides DSM 266] Length = 621 Score = 520 bits (1339), Expect = e-145, Method: Compositional matrix adjust. Identities = 272/620 (43%), Positives = 374/620 (60%), Gaps = 10/620 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IV G GHAGCEA AA+ G S LIT S I MSCNPAIGG+ KG + REIDAL Sbjct: 2 YDIIVAGAGHAGCEAVLAAARTGMSCLLITSDLSAIARMSCNPAIGGVAKGQITREIDAL 61 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + D GIQFR+LN KG A+ PR QADR LY + M++ I Q+N+D++Q V Sbjct: 62 GGEMAKAIDETGIQFRMLNKSKGAAMHSPRAQADRALYSVYMRKIIEEQDNIDLVQDTVT 121 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGR-MGDSPSNSLFN 184 G + E + ++ +I+ +V+L GTFL G+IHIG P GR + + P + L Sbjct: 122 GLDVESGAVRGAILPSGRIIKGKSVILCCGTFLNGLIHIGMNHFPGGRTIAEPPVSGLTE 181 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGIT 243 + F GRLKTGTP R+D +++ + E+Q D PFSF TD + +R Q+ C +T Sbjct: 182 NLQSLGFRAGRLKTGTPPRIDSRSVNYSLVEEQSGDPDPRPFSFHTDSLGHRAQVSCFVT 241 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 +T TH ++ S ++SG ++ GPRYCPS+EDKI RF ++N H IFLEPEG T+ Sbjct: 242 KTKETTHELLRTGFSRSPLFSGKVQGVGPRYCPSVEDKIFRFPDKNSHHIFLEPEGAETN 301 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y NG ST+LPE+IQ +R+IPGLE V +IRPGYAIEYD+ P ++ TLETK I L Sbjct: 302 EMYVNGFSTSLPEDIQLLALRSIPGLEHVKMIRPGYAIEYDFFFPYQIKNTLETKIIENL 361 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGT+GYEEAAAQGL+AGIN++ K R+ +YIGV+IDDL +K ++EP Sbjct: 362 YFAGQINGTSGYEEAAAQGLMAGINASLKIQNRKPFVLDRSQAYIGVLIDDLVTKDIIEP 421 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTS AE+RISLR DNAD RL +G + G + + I LR L ++ L Sbjct: 422 YRMFTSSAEHRISLRHDNADIRLCRMGHEAGTVDFSSFTKTEYKISAIRQLRQLCDTMKL 481 Query: 484 TSKNLSSTSISFKQDGKTR--TAYEFLSYPDFSIQNLFSICPDARK------FSSLVIER 535 + S Q + L P+ +NL + D R V E+ Sbjct: 482 HPDQIISAMAGAAQQPPLQPIAISNLLKRPEIDFENLLVLSEDFRAGVNEITTDPDVFEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 + I+ Y Y R ++ ++I E IP F Y+++ LSNE +EKL++ KP + QA Sbjct: 542 VVIDLKYEGYLKRDLLMTEKIARLESHSIPGSFSYATVSGLSNEGREKLTLHKPETIGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G++P+ +++LLI I + Sbjct: 602 SRIPGVSPSDISVLLIKIGR 621 >gi|15835399|ref|NP_297158.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Chlamydia muridarum Nigg] gi|270285578|ref|ZP_06194972.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Chlamydia muridarum Nigg] gi|270289588|ref|ZP_06195890.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Chlamydia muridarum Weiss] gi|301336974|ref|ZP_07225176.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Chlamydia muridarum MopnTet14] gi|13626938|sp|Q9PJP3|MNMG_CHLMU RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|7190812|gb|AAF39588.1| glucose inhibited division protein A [Chlamydia muridarum Nigg] Length = 610 Score = 520 bits (1339), Expect = e-145, Method: Compositional matrix adjust. Identities = 271/615 (44%), Positives = 380/615 (61%), Gaps = 16/615 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAGCEAA AAK+GAS L+T TI +SCNPA+GG+GKGH+VREIDAL Sbjct: 8 YDVIVIGAGHAGCEAAYCAAKMGASVLLLTSNLDTIAKLSCNPAVGGIGKGHIVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+M V D +GIQFR+LN KGPAVR PR Q D++LY + M++ + L ++QG Sbjct: 68 GGVMAEVTDLSGIQFRILNQTKGPAVRAPRAQVDKQLYHIHMKQLLEQVPGLHIMQGTAE 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + + + ++ TVVL++GTF+RG+IHIG GR+GD+ S L Sbjct: 128 ALLDDGEKVLGVSTKEGWAYSGETVVLSSGTFMRGLIHIGTQNFSGGRLGDAASLGLSKD 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR--QIECGIT 243 + F GRLKTGTPARL +I + E+Q D+ + F + + Q+ C IT Sbjct: 188 LKRLGFPLGRLKTGTPARLLSSSIDFSIMEEQPGDQN-VCFVHREEAFVPKLPQVSCHIT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 T +T +I N+ SA+Y G I+ GPRYCPSIEDKIV+F +++ H IF+EPEGLNT Sbjct: 247 YTTDKTKDLIANNLHRSALYGGRIEGVGPRYCPSIEDKIVKFADKDRHHIFIEPEGLNTR 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY NG+ST++P ++Q++ IR++ GLE I RP YAIEYDYI + P+LE+K + GL Sbjct: 307 EVYVNGLSTSMPFDVQYEIIRSVAGLENAVITRPAYAIEYDYIQGNVILPSLESKILEGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 FL GQINGTTGYEEAAAQGL+AG+N+ K SR +SYIGVM+DDLT++ + EP Sbjct: 367 FLCGQINGTTGYEEAAAQGLIAGVNAVNKVLHRPAFIPSRQESYIGVMLDDLTTQVLDEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R+ LR DNA RL+ G LG + +R+A + ++ N + + L Sbjct: 427 YRMFTSRAEHRLLLRQDNAGMRLSHYGHALGLLS---SERYAMFQKQKNCIEHEKERLAK 483 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICP-DARKFSSLVIERLQIESSY 542 T + + + + L P+ S Q L + P D + + ++ L++E Y Sbjct: 484 TFRKYGDSIVPLTK---------ILCRPEVSYQQLLTEFPEDVKDWGPIIGASLEMEIKY 534 Query: 543 AAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMT 602 + Y RQ + ++ E LIP+ DY S+ ALS E +EKLS P + A++I G++ Sbjct: 535 SGYISRQQTLIRSMEKAENTLIPEGIDYHSISALSLEAREKLSKFTPRTIGSAARISGIS 594 Query: 603 PAALNLLLIYIKKNT 617 A + +L++ +KK+ Sbjct: 595 VADIQVLMVSLKKDA 609 >gi|154272573|ref|XP_001537139.1| hypothetical protein HCAG_08248 [Ajellomyces capsulatus NAm1] gi|150409126|gb|EDN04582.1| hypothetical protein HCAG_08248 [Ajellomyces capsulatus NAm1] Length = 673 Score = 520 bits (1338), Expect = e-145, Method: Compositional matrix adjust. Identities = 283/637 (44%), Positives = 394/637 (61%), Gaps = 25/637 (3%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDV+VIGGGHAG EA A AA+LGA TAL+T S IG SCNP+IGG+GKG ++REIDA Sbjct: 11 AYDVVVIGGGHAGSEACAAAARLGARTALVTPSLSNIGVCSCNPSIGGIGKGTMIREIDA 70 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDG+ G+VAD +GIQFR+LN KG AV GPR Q DR LYR M E+ + L +++G+V Sbjct: 71 LDGVAGKVADKSGIQFRILNRSKGEAVWGPRAQIDRVLYRQNMLDELSNTPGLSIVEGKV 130 Query: 125 AGFNTEKNIISS--------IVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGD 176 K+ + + + ++ +I V++TTGTFL G IHIG P+GR+G+ Sbjct: 131 GDIIVSKDNLPAGSQGKIIGVRLESGEVIPTGRVIITTGTFLGGEIHIGLDVFPSGRLGE 190 Query: 177 SPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT-- 234 + + L S + F GRLKTGTP RLD KTI + + Q D IPFS++ +++ Sbjct: 191 AATFGLSRSLREAGFQLGRLKTGTPPRLDKKTIDFSNLQVQPGDSPPIPFSYLNNRVDVD 250 Query: 235 -NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQI 293 Q+ C T TN H+I+ +N+ S +K GPRYCPS+E KI+RF ++ H I Sbjct: 251 DEDQLPCWSTYTNEAAHQIVRDNLDKSIHIRETVK--GPRYCPSLESKIIRFKDKQRHMI 308 Query: 294 FLEPEGLNTD-VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF 352 +LEPEG D V+YPNGIS +P + Q +RT+ GLE V +++ GY +EYDY++P+ L Sbjct: 309 WLEPEGFEPDEVIYPNGISMTIPADAQLAMLRTVAGLENVRMLQAGYGVEYDYVDPRSLR 368 Query: 353 PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMI 412 PTLETK ISGL+LAGQINGTTGYEEAA QG++AGIN+ S SR+D +IG+M+ Sbjct: 369 PTLETKLISGLYLAGQINGTTGYEEAAGQGILAGINAGLASKSKPPFTLSRSDGFIGIMV 428 Query: 413 DDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYN 472 DDL +KGV EPYRMFTSR+EYRIS R DNAD RLT G ++G +G++R + F++ + Sbjct: 429 DDLITKGVSEPYRMFTSRSEYRISTRSDNADLRLTARGREVGVVGDKRWEHFSQVQAQIT 488 Query: 473 FLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLF-SICP-------- 523 L++LL++ S S D R+A++ L D SI ++ I P Sbjct: 489 ELQTLLENTKFPSALWSRKGFGVHYDNNVRSAFDLLRLRDISIDDIIPHIEPPSSSRSGK 548 Query: 524 --DARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELK 581 A F+S + R+ +E YA Y + + +E L+P D DYS + LS E + Sbjct: 549 AYTASSFASEIKHRVAVEGRYAPYVKMHADRTRNFEKDEALLLPPDIDYSLITGLSTEER 608 Query: 582 EKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTV 618 L ++P ++ A +IEGMTP A LL+++++ T Sbjct: 609 AALEKVRPESIGMARRIEGMTPVAALKLLVHVRRTTA 645 >gi|121703666|ref|XP_001270097.1| mitochondrial translation optimization protein (Mto1), putative [Aspergillus clavatus NRRL 1] gi|119398241|gb|EAW08671.1| mitochondrial translation optimization protein (Mto1), putative [Aspergillus clavatus NRRL 1] Length = 692 Score = 520 bits (1338), Expect = e-145, Method: Compositional matrix adjust. Identities = 284/637 (44%), Positives = 394/637 (61%), Gaps = 27/637 (4%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R+YDV+VIGGGHAG EA+A AA+ GA TAL+T S IG SCNP+ GG+GKG ++REID Sbjct: 36 RAYDVVVIGGGHAGSEASAAAARSGARTALVTPSLSNIGVCSCNPSFGGIGKGTMIREID 95 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 A+DG+ GR+ D AGI FRVLN KGPAV GPR Q DR+LY+ MQ E+++ E L +++G+ Sbjct: 96 AMDGVAGRIIDRAGIMFRVLNRSKGPAVWGPRAQIDRDLYKTYMQEELVATEGLSIVEGK 155 Query: 124 VAGFNTEK----NI------ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGR 173 VA K N+ I + ++ +I VV+TTGTFL G IHIG P+GR Sbjct: 156 VADIVVSKEGVENVPGAQGKIVGVRLESGEVIPTGRVVITTGTFLGGEIHIGLEAYPSGR 215 Query: 174 MGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI 233 MG++ + L S + F GRLKTGTP RLD KTI + E Q D PFS++ + Sbjct: 216 MGEAATFGLSKSLHEAGFQLGRLKTGTPPRLDMKTIDFSSLEVQKGDSPPQPFSYLNSTV 275 Query: 234 T---NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNG 290 Q+ C +T TN +H II N++ S ++ GPRYCPS+E KI+RF ++ Sbjct: 276 EVGDEGQLTCWMTHTNEASHEIIRANLEKSIHIRETVR--GPRYCPSLESKIIRFHDKKQ 333 Query: 291 HQIFLEPEGLN-TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPK 349 HQI+LEPEG +V+YPNGIS +P + Q+ +RT+ GLE V +++PGY +EYDYI+P+ Sbjct: 334 HQIWLEPEGFAPNEVIYPNGISMTVPADAQYAMLRTVRGLENVRMLQPGYGVEYDYIDPR 393 Query: 350 ELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIG 409 L PTLETK ISGL+LAGQINGTTGYEEAA QG++AG N+ + + +R+D +IG Sbjct: 394 NLRPTLETKLISGLYLAGQINGTTGYEEAAGQGIIAGTNAGLSAQGRQPLTLTRSDGFIG 453 Query: 410 VMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQ 469 +MIDDL +KGV EPYRMFT+R+EYRIS R DNAD RLT + G + +R +RF Sbjct: 454 IMIDDLVTKGVSEPYRMFTARSEYRISTRSDNADLRLTRMARNAGIVTNKRWQRFTDTEA 513 Query: 470 EYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLF---------S 520 + L+ LL+ L+S S + D R+A + L I L + Sbjct: 514 QIQELQGLLERTRLSSSVWSRKGFKTRTDSSVRSALDLLCLDAVDIDTLIPHIESPSGTA 573 Query: 521 ICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNEL 580 P + F + R+ IE YA Y RQ A++ +E L+P D DY+ + +S E Sbjct: 574 YTPSS--FDPAIRARVAIEGRYAPYVKRQEAMARKFLQDESLLLPADLDYAEVQGISTEE 631 Query: 581 KEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNT 617 ++ L ++P ++ A +IEG+TPA LL++++++T Sbjct: 632 RQALERVRPVSVGMARRIEGVTPAGALRLLMHVRRST 668 >gi|239997980|ref|ZP_04717904.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria gonorrhoeae 35/02] gi|240124724|ref|ZP_04737610.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria gonorrhoeae SK-92-679] Length = 642 Score = 520 bits (1338), Expect = e-145, Method: Compositional matrix adjust. Identities = 285/622 (45%), Positives = 388/622 (62%), Gaps = 14/622 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 19 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 78 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R+QADR LY+ +++ + +QENLD+ Q Sbjct: 79 ALGGAMALATDKSGIQFRRLNASKGAAVRATRSQADRILYKASIREMLENQENLDLFQQA 138 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E IS ++ + + VVLT GTFL G IHIG GR GD + SL Sbjct: 139 VEDVTLEGERISGVITAMGAEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 198 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT----DKITNRQIE 239 + GRLKTGTP R+DG+TI + + +Q D P M+ ++ RQ+ Sbjct: 199 GRLRELKLPQGRLKTGTPPRIDGRTIDFSQLTEQPGD---TPVPVMSVRGNAEMHPRQVS 255 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEG Sbjct: 256 CWITHTNTQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEG 315 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 316 LTTHEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKT 375 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG N+ + D + R +Y+GV++DDL +KG Sbjct: 376 IEGLFFAGQINGTTGYEEAAAQGLLAGANAVQYVRGQDPLLLRREQAYLGVLVDDLITKG 435 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 + EPYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + + LK Sbjct: 436 LNEPYRMFTSRAEYRLQLREDNADMRLTEDGYKIGLVGEAQWRMFNEKREAVEREIQRLK 495 Query: 480 SLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI---CPDARKFSSLVI 533 + + L+ + ++ + ++ L P+ L ++ P R S+ V+ Sbjct: 496 TTWYAPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGAIPSER-LSAEVV 554 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I+ Y Y RQ E + E +P DY + LS E+++KL+ KP + Sbjct: 555 EQVEIQVKYQGYIDRQNEEIDSRRDIETLKLPDGIDYGRVKGLSAEVQQKLNQHKPETVG 614 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I G+TPAA+ LL++++K+ Sbjct: 615 QASRISGVTPAAVALLMVHLKR 636 >gi|153854262|ref|ZP_01995561.1| hypothetical protein DORLON_01555 [Dorea longicatena DSM 13814] gi|149753037|gb|EDM62968.1| hypothetical protein DORLON_01555 [Dorea longicatena DSM 13814] Length = 636 Score = 520 bits (1338), Expect = e-145, Method: Compositional matrix adjust. Identities = 274/623 (43%), Positives = 389/623 (62%), Gaps = 15/623 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+VIG GHAGCEAA A+LG T + T +I M CNP IGG KGHLVRE+DAL Sbjct: 15 YDVVVIGAGHAGCEAALATARLGFQTLVFTVSVDSIAMMPCNPNIGGSSKGHLVRELDAL 74 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+V D IQ ++LN KGPAV R QAD+ +Y M+R + +QENL++ QGEVA Sbjct: 75 GGEMGKVIDRTFIQSKMLNKSKGPAVHSLRAQADKAVYSRTMRRVLEAQENLEIKQGEVA 134 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E I+ + + C V++ +GT+L+ G + G G +N L + Sbjct: 135 NLLVEDGKITGVQTFSGATYHCKAVIICSGTYLKARCIYGDVSQYTGPNGLQAANHLTDC 194 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 + R KTGTPAR+D KT+ + K E+QF DER++PFSF T D + Q C +T Sbjct: 195 LKELGIKMYRFKTGTPARVDRKTVDFSKMEEQFGDERVVPFSFTTNPDDVQIDQASCWLT 254 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II N+ S +YSG I+ GPRYCPSIEDK+V+F ++ HQ+FLEPEGL TD Sbjct: 255 YTNETTHEIIRANLDRSPLYSGMIEGTGPRYCPSIEDKVVKFADKKRHQVFLEPEGLETD 314 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G+S++LPE++Q+ R++PGLE V I+R YAIEYD I+ ++L P+LE + ISGL Sbjct: 315 EMYIGGMSSSLPEDVQYAMYRSVPGLEHVKIVRNAYAIEYDCIDARQLKPSLEFRNISGL 374 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ NG++GYEEAAAQGL+AGIN+ARK + + R+++YIGV+IDDL +K EP Sbjct: 375 FSAGQFNGSSGYEEAAAQGLIAGINAARKLQGKESLVLDRSEAYIGVLIDDLVTKESHEP 434 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL-- 481 YRM TSRAEYR+ LR DNAD RLT G ++G I Q+R+ + ++ + S ++ L Sbjct: 435 YRMMTSRAEYRLLLRQDNADQRLTEKGYEVGLIS---QERYDRLKEKERLIESEIERLKN 491 Query: 482 --VLTSKNLSSTSISFKQD--GKTRTAYEFLSYPDFSIQNLFSIC---PDARK-FSSLVI 533 V TS+ + S++ + E + P+ S + + +I P+ K ++ VI Sbjct: 492 AYVGTSEKVQELLESYESTPLNSGSSLAELIRRPELSYEAVTAIDVTRPELPKDLAAEVI 551 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E++ I Y Y RQ + ++ K E + IP+D DY ++ +L E +KL +P ++ Sbjct: 552 EQVDISLKYDGYIQRQKRQVEQFKKMENKKIPEDMDYDAVNSLRIEAVQKLKEYRPVSIG 611 Query: 594 QASKIEGMTPAALNLLLIYIKKN 616 QAS+I G++PA +++LL+Y+ N Sbjct: 612 QASRISGVSPADISVLLVYLSGN 634 >gi|150866215|ref|XP_001385733.2| Mitochondrial Translation Optimization [Scheffersomyces stipitis CBS 6054] gi|149387471|gb|ABN67704.2| Mitochondrial Translation Optimization [Scheffersomyces stipitis CBS 6054] Length = 689 Score = 520 bits (1338), Expect = e-145, Method: Compositional matrix adjust. Identities = 272/645 (42%), Positives = 389/645 (60%), Gaps = 32/645 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 + V+VIGGGHAGCEAA +A+ G T LIT IG+ SCNP++GG+GKG L+RE+DAL Sbjct: 38 FPVVVIGGGHAGCEAATGSARSGTPTTLITPNVDKIGTASCNPSMGGVGKGTLLREVDAL 97 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DG+ R+ D AGI F++LN KG AV GPR Q DR++Y MQ+EIL+ NL V++ V Sbjct: 98 DGVAARITDKAGIHFKILNASKGAAVHGPRAQIDRKIYLEEMQKEILNYPNLSVLEASVE 157 Query: 126 GF-------------NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAG 172 E + +V+ D S++ CS VV+TTGTFL G IHIG P+G Sbjct: 158 DIIIEPTRDQSTDAEGREFGSVKGLVLGDGSIVGCSKVVVTTGTFLGGEIHIGLTAYPSG 217 Query: 173 RMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK 232 R+G+ + L +F F GRLKTGTPARL KTI + Q +D P S+M DK Sbjct: 218 RIGEDATFGLSETFRTAGFKLGRLKTGTPARLSSKTIDYSNLNVQPSDYPPQPISYMNDK 277 Query: 233 ITNRQ--IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNG 290 + ++ + C T T E H++I EN+ S +K GPRYCPSIE KI++F ++ Sbjct: 278 VQLQEQLVNCYQTSTTPEFHKLISENLDKSIHIKETVK--GPRYCPSIESKIIKFPQKQS 335 Query: 291 HQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKE 350 H ++LEPEGL+TD+VYPNGIS +P +IQ Q +R +PG V +I+PGY +EYDY++P+E Sbjct: 336 HMVWLEPEGLDTDLVYPNGISCTMPADIQEQLVRMMPGCNNVKMIQPGYGVEYDYVDPRE 395 Query: 351 LFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGV 410 L TLE+K + GL+LAGQINGTTGYEEAA+QG +AGIN+ + + +R D Y+GV Sbjct: 396 LKMTLESKLVDGLYLAGQINGTTGYEEAASQGCLAGINAGLAYKGAEPLELTRADGYLGV 455 Query: 411 MIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQE 470 ++DDL +KG+ EPYRMFTSR+E+RIS+R DNAD RLT G G + E R + K + + Sbjct: 456 LVDDLITKGIEEPYRMFTSRSEFRISIRSDNADRRLTEKGYNAGVVSEERYHHYMKEMVQ 515 Query: 471 YNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRT---AYEFLSYPDFSIQNLFS------- 520 ++ ++ L SL L+ + D T ++ LSY SI +L Sbjct: 516 FHSIKDHLTSLSLSGAIWAPALKGLSSDVNRNTLVDGWKLLSYKGMSIADLLPHMSKFTR 575 Query: 521 ---ICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPAL- 576 + P S+ ++ R+ +ES Y + ++ +E L+P +++Y+ L Sbjct: 576 DGIVPPYYENLSARLMNRIDVESDYTPWMPKEKAHLTAYAADENLLLPVNYNYNYEGKLK 635 Query: 577 -SNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVKL 620 S+E+ L+ ++P + QA +I+G+TPAA+ L +K N +L Sbjct: 636 ISHEVCVLLNTIQPKTIGQARRIQGVTPAAIFELFKLVKGNQAQL 680 >gi|323705842|ref|ZP_08117414.1| glucose inhibited division protein A [Thermoanaerobacterium xylanolyticum LX-11] gi|323534838|gb|EGB24617.1| glucose inhibited division protein A [Thermoanaerobacterium xylanolyticum LX-11] Length = 623 Score = 520 bits (1338), Expect = e-145, Method: Compositional matrix adjust. Identities = 274/618 (44%), Positives = 387/618 (62%), Gaps = 14/618 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV VIG GHAGCEAA A+LG T +I M CNP+IGG K +LVREIDAL Sbjct: 8 YDVAVIGLGHAGCEAALATARLGLKTVAFAINLDSIALMPCNPSIGGPAKTNLVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D IQ R LN KGPAVR R Q+D++ Y+ M+ + QENLD+ Q EV Sbjct: 68 GGQMAINTDLTLIQQRTLNTSKGPAVRALRAQSDKKRYQFNMKYTLEKQENLDIKQAEVV 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + S++ + + C + ++TTGT+LRG I IG + G G P+N L S Sbjct: 128 DIEVEDGQVKSVITKTGARYLCRSCIVTTGTYLRGRIIIGDVSYSGGPNGLFPANELSKS 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 F + + R KTGTPAR+D K+I +D E Q D+++ PFS+M D+I QI C +T T Sbjct: 188 FERLNIRLMRFKTGTPARVDKKSINFDAMEIQPGDDKVTPFSYMHDEINVEQIPCWLTYT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N +TH +IM+NI S +YSG+IK GPRYCPSIEDK+V+F ++ HQ+F+EPEG +T+ + Sbjct: 248 NTKTHEVIMKNIDRSPLYSGEIKGVGPRYCPSIEDKVVKFPDKLRHQLFIEPEGRDTNEM 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+S+++PE++Q +F+RTI GLE V ++RPGYAIEYD I+P +L +LE K ISGLF Sbjct: 308 YVQGMSSSMPEDVQIEFLRTIKGLENVKVMRPGYAIEYDCIDPTQLKQSLELKTISGLFF 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ+NGT+GYEEAAAQGL+AGIN+A K + R+++YIGV+IDDL +KG EPYR Sbjct: 368 AGQVNGTSGYEEAAAQGLMAGINAAMKHYGREPFILDRSEAYIGVLIDDLVTKGTNEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNF-LRSLLKSLVLT 484 M TSRAEYR+ LR DNAD RLT G ++G + + R RF +Y + L ++++ Sbjct: 428 MLTSRAEYRLILRQDNADFRLTEKGRQIGLVDDERYNRFLMKKDQYEKEMERLKNTMIVP 487 Query: 485 SKNLSSTSISFKQDGKT-----RTAYEFLSYPDF---SIQNLFSICPDARKFSSLVIERL 536 S +++ K G + T Y+ L P+ S + + S PD V ++ Sbjct: 488 SHDVNEY---LKSKGSSPIVTGMTMYDLLKRPEIDYVSSKVIDSDRPD--DIRDDVAFQI 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 I Y Y +QM + ++ K E + IP +Y + +S E ++KL + P ++ QAS Sbjct: 543 DINIKYEGYIRKQMEQVEKFKALENKKIPSWINYDDIKGISIEARQKLKSIMPTSVGQAS 602 Query: 597 KIEGMTPAALNLLLIYIK 614 +I G++PA ++++LIY++ Sbjct: 603 RISGVSPADISVILIYLQ 620 >gi|240113912|ref|ZP_04728402.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria gonorrhoeae MS11] Length = 642 Score = 520 bits (1338), Expect = e-145, Method: Compositional matrix adjust. Identities = 286/622 (45%), Positives = 387/622 (62%), Gaps = 14/622 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 19 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 78 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY+ +++ + +QENLD+ Q Sbjct: 79 ALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKASIREMLENQENLDLFQQA 138 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E IS ++ + VVLT GTFL G IHIG GR GD + SL Sbjct: 139 VEDVTLEGERISGVITAMGVEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 198 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT----DKITNRQIE 239 + GRLKTGTP R+DG+TI + + +Q D P M+ ++ RQ+ Sbjct: 199 GRLRELKLPQGRLKTGTPPRIDGRTIDFSQLTEQPGD---TPVPVMSVRGNAEMHPRQVS 255 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEG Sbjct: 256 CWITHTNTQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEG 315 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 316 LTTHEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKT 375 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG N+ + D + R +Y+GV++DDL +KG Sbjct: 376 IEGLFFAGQINGTTGYEEAAAQGLLAGANAVQYVRGQDPLLLRREQAYLGVLVDDLITKG 435 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 + EPYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + + LK Sbjct: 436 LNEPYRMFTSRAEYRLQLREDNADMRLTEDGYKIGLVGEAQWRMFNEKREAVEREIQRLK 495 Query: 480 SLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI---CPDARKFSSLVI 533 + T + L+ + ++ + ++ L P+ L ++ P R S+ V+ Sbjct: 496 TTWYTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGAIPSER-LSAEVV 554 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I+ Y Y RQ E + E +P DY + LS E+++KL+ KP + Sbjct: 555 EQVEIQVKYQGYIDRQNEEIDSRRDIETLKLPDGIDYGRVKGLSAEVQQKLNQHKPETVG 614 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I G+TPAA+ LL++++K+ Sbjct: 615 QASRISGVTPAAVALLMVHLKR 636 >gi|150392472|ref|YP_001322521.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Alkaliphilus metalliredigens QYMF] gi|166989733|sp|A6TXE4|MNMG_ALKMQ RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|149952334|gb|ABR50862.1| glucose inhibited division protein A [Alkaliphilus metalliredigens QYMF] Length = 630 Score = 519 bits (1337), Expect = e-145, Method: Compositional matrix adjust. Identities = 276/626 (44%), Positives = 392/626 (62%), Gaps = 15/626 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+G GHAGCEAA AA++GA T ++T +I M CNP+IGG GKGHLVREIDA Sbjct: 7 TFDVIVVGAGHAGCEAALAAARMGAKTLMLTMTLDSIAMMPCNPSIGGTGKGHLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 + G MG D IQ R+LN KGPAV R QAD+ Y M++ I ++ NL + Q EV Sbjct: 67 IGGEMGINTDKTFIQSRMLNTGKGPAVHSLRAQADKNKYHTEMKKTIENEPNLLLKQAEV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E N + +V + + +V+L TG +LRG I+IG++ +G G PS L Sbjct: 127 VDLIIEDNTVKGVVTRSGASFYSHSVILATGVYLRGKIYIGEVNYESGPNGLFPSMHLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 K + R KTGTPAR+ ++ + K E+ DE ++PFSFM D I +Q+ C +TR Sbjct: 187 KLTKLGCNMRRFKTGTPARIHQDSVDFSKMEEHLGDEEIVPFSFMNDGIEKKQVPCWLTR 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETHR+IMEN+ SA+Y GD++S GPRYCPSIEDK+VRF ++ HQIF+EPEGL+T Sbjct: 247 TTGETHRVIMENLNRSAMYRGDMESVGPRYCPSIEDKVVRFSDKPSHQIFIEPEGLDTKE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+ST+LPEE+Q ++T+ GLE I+RP YAIEYD I+P +L PTLE K I LF Sbjct: 307 MYVQGMSTSLPEEVQDAMLKTVIGLESAVIMRPAYAIEYDCIDPTQLKPTLEVKHIENLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 GQ NGT+GYEEAAAQGL+AGIN+ K+ + R+++YIGV+IDDL +KG EPY Sbjct: 367 SGGQFNGTSGYEEAAAQGLMAGINAVLKTKGEEPFVLDRSEAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF---AKYIQEYNFLRSLLKSL 481 RM TSRAEYR+ LR DNAD RLT K+G + R +R+ +I+E + L K+ Sbjct: 427 RMMTSRAEYRLILRQDNADMRLTEKSYKIGLASKERLERYLLKKSHIEEE--ITRLKKTN 484 Query: 482 VLTSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV---IER 535 V K L S + G + Y+ L P+ + + L I D + +V E+ Sbjct: 485 VSPEKANPILEENKSSLIKAG--MSLYDLLKRPEVTYKVLKKI--DENRNVDIVRDAQEQ 540 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 +I Y Y +Q+ + + K E +++P++ DY + L E ++KLS ++P ++ QA Sbjct: 541 CEIIIKYEGYIEKQLRQIDQFKKLENKILPQEIDYHGIDGLRLEARQKLSDIQPMSVGQA 600 Query: 596 SKIEGMTPAALNLLLIYIKKNTVKLN 621 S+I G++P+ +++L+IY+++ + N Sbjct: 601 SRISGVSPSDISVLMIYLEQRRRQKN 626 >gi|77416429|sp|Q7ULV7|MNMG_RHOBA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A Length = 653 Score = 519 bits (1337), Expect = e-145, Method: Compositional matrix adjust. Identities = 284/623 (45%), Positives = 383/623 (61%), Gaps = 21/623 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+VIG GHAG EAAA AA+LGA TAL+T T+G MSCNPAIGG+ KG +VRE+DAL Sbjct: 12 YDVVVIGAGHAGTEAAAAAARLGAKTALLTTNLDTVGQMSCNPAIGGVAKGQIVREVDAL 71 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLMG DA GIQFR+LN +KGPA+ PR QAD++ Y+ ++ I +Q+NLD+ Q V Sbjct: 72 GGLMGEAIDATGIQFRMLNRRKGPAMHSPRAQADKKAYQNFIKYRIETQDNLDLRQETVE 131 Query: 126 GFNTE----------KNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMG 175 TE + + ++ +++ TV+LTTGTFL+ ++H GK + GR G Sbjct: 132 DLITEPIADGQDRLANQRVIGVRVRGDAVYHAPTVILTTGTFLQAIMHTGKSQSAGGRAG 191 Query: 176 DSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN 235 + + L + F R KTGTP RL+ +TI + E+Q D+ PFS++ D I++ Sbjct: 192 EGTTAGLSGALKGMGFTLDRFKTGTPPRLNARTIDYSGLEEQPGDDDPQPFSYLNDAISS 251 Query: 236 RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFL 295 Q+ C I TN H +I N+ + +YSG I S GPRYCPSIEDK+VRF +++ HQ+FL Sbjct: 252 PQMACHIAHTNERVHDLIRANLDRAPMYSGQIDSRGPRYCPSIEDKVVRFADKSSHQLFL 311 Query: 296 EPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTL 355 EPEG T VY NGIST+LP ++Q R IPGLEK I+R GYA+EYDY P +L+P L Sbjct: 312 EPEGRQTCEVYVNGISTSLPRDVQDAMFRCIPGLEKAAIMRYGYAVEYDYCPPTQLWPHL 371 Query: 356 ETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDL 415 E+K +SGLF AGQINGTTGYEEAA QGL+AG+N+AR + SR D+YIGV++DDL Sbjct: 372 ESKSVSGLFFAGQINGTTGYEEAAGQGLIAGLNAARTAASKTPWVPSRQDAYIGVLVDDL 431 Query: 416 TSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLR 475 + G EPYRMFTSRAEYR+ LR DNAD RLT +LG I R++RF + + E Sbjct: 432 VTSGTDEPYRMFTSRAEYRLLLRQDNADRRLTAQADELGLIDAARRERFHRKLAEIERGT 491 Query: 476 SLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIER 535 LL+ + G T +L P+ + + P+ E+ Sbjct: 492 ELLQQAKFQPET-----------GPTVRGDVYLRRPEVTWNVIAEQVPELAGIGREAAEQ 540 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 I+ YA Y RQ E + ++ IP FDY + L NE KEKL+ ++P NL QA Sbjct: 541 CSIDIKYAGYIDRQQAEVHKQSRHAEKSIPVSFDYDKIGPLRNEAKEKLTKVRPLNLGQA 600 Query: 596 SKIEGMTPAALNLLLIYIKKNTV 618 +I G+TPA L L+L +++ N++ Sbjct: 601 KRISGITPADLALVLAHLENNSL 623 >gi|89898690|ref|YP_515800.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Chlamydophila felis Fe/C-56] gi|123482778|sp|Q252Y3|MNMG_CHLFF RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|89332062|dbj|BAE81655.1| glucose inhibited division protein NAD/FAD-dependent oxidoreductase [Chlamydophila felis Fe/C-56] Length = 611 Score = 519 bits (1337), Expect = e-145, Method: Compositional matrix adjust. Identities = 280/621 (45%), Positives = 385/621 (61%), Gaps = 22/621 (3%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+G GHAGCEAA +AK+GAS ++T TI +SCNPA+GG+GKGH+VREIDA Sbjct: 7 SYDVIVVGAGHAGCEAAFCSAKMGASVLILTSNLDTIAKLSCNPAVGGIGKGHIVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G+M + D +GIQFR+LN KGPAVR PR Q D+++Y + M+R + S L ++QG V Sbjct: 67 LGGIMAEITDRSGIQFRILNQTKGPAVRAPRAQVDKQMYHIHMKRLLESTPGLHIMQGTV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 ++N+I + ++ TV+L++GTF+RG+IHIG GR+GD + L Sbjct: 127 ESLLDKENVIQGVTTKEGIAYLGKTVILSSGTFMRGLIHIGDRSFSGGRLGDPAATGLSA 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR--QIECGI 242 + + F RLKTGTP RL +I + TE+Q D + F + Q+ C I Sbjct: 187 ALKERGFPISRLKTGTPPRLLASSIDFSVTEEQPGDPG-VGFVHRDEPFVPPLPQVSCYI 245 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T T +T II NI+ SA+Y G I+ GPRYCPSIEDKIV+F ++ H IF+EPEG+ T Sbjct: 246 THTTEKTKEIITANIRRSALYGGRIEGIGPRYCPSIEDKIVKFADKERHHIFIEPEGIYT 305 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 VY NG+ST++P ++Q++ IR++ GLE I RP YAIEYDY++ ++PTLE+K I G Sbjct: 306 QEVYVNGLSTSMPFDVQYEMIRSVRGLENAIITRPAYAIEYDYVHGNVIYPTLESKTIEG 365 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LFL GQINGTTGYEEAAAQGL+AGIN+ K + SR +SYIGVM+DDLT++ + E Sbjct: 366 LFLCGQINGTTGYEEAAAQGLIAGINAVNKVLRKPDFIPSRQESYIGVMLDDLTTQVLDE 425 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF--AKYIQEYNFLRSLLKS 480 PYRMFT RAE+R+ LR DNA RL+ G LG + + R + F K I E LR Sbjct: 426 PYRMFTGRAEHRLLLRQDNACLRLSHYGRDLGLLSKERYELFEHQKQIIEEEKLR----- 480 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAY-EFLSYPDFSIQNLFSICP-DARKFSSLVIERLQI 538 LS T FK+ G + + + L P+ S L + P + R F S++ L++ Sbjct: 481 -------LSKT---FKKYGNSVVSLAKALCRPEVSYDTLREVFPEEVRDFGSILNASLEM 530 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E YA Y RQ + E IP+D DY S+ +LS E +EKL+ P + AS+I Sbjct: 531 EIKYAGYIERQKSLIHSLSKSENMTIPEDIDYQSISSLSLEAREKLAKFTPRTIGSASRI 590 Query: 599 EGMTPAALNLLLIYIKKNTVK 619 G+ A + +L++ +KK+ K Sbjct: 591 SGIANADIQVLMVAVKKHAHK 611 >gi|313683438|ref|YP_004061176.1| glucose inhibited division protein a [Sulfuricurvum kujiense DSM 16994] gi|313156298|gb|ADR34976.1| glucose inhibited division protein A [Sulfuricurvum kujiense DSM 16994] Length = 624 Score = 519 bits (1337), Expect = e-145, Method: Compositional matrix adjust. Identities = 274/617 (44%), Positives = 383/617 (62%), Gaps = 7/617 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+GGGHAG EAA +A++G +T LI+ +G+ SCNPA+GGL KGHLVRE+DA Sbjct: 2 TYDVIVVGGGHAGIEAALASARMGQNTLLISILAEQVGATSCNPAVGGLAKGHLVRELDA 61 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG + D AGIQFR+LN+ KGPAVRG R Q D + YR+ + +IL+ N+ +IQ V Sbjct: 62 LGGEMGLLTDEAGIQFRILNITKGPAVRGSRAQIDMDRYRVIARNKILTTPNMSLIQETV 121 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E+ ++ + + R V+LTTGTFL GV+HIG++ AGR G+ P+ L + Sbjct: 122 NALIIEEGVVVGVRTHLLNEYRAKKVILTTGTFLNGVVHIGEITQEAGRFGEFPAKGLTD 181 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI----TNRQIEC 240 S + + GRLKTGT R+D +I + E Q DE PFSF TD+ T +Q+ C Sbjct: 182 SLREAGLNVGRLKTGTCPRVDSSSIDFSVMEIQDGDELPNPFSFRTDRAEFARTKKQLPC 241 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 I TN ETH +I N + +++G I+ GPRYCPSIEDKI RF ++ H +F+EP+ Sbjct: 242 YIAYTNEETHSLIEGNFHRAPLFTGQIEGVGPRYCPSIEDKINRFRDKERHHLFIEPQTA 301 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 Y NG+ST+LP ++Q I ++ G+E I+R GYAIEYDY++P EL TLETKK+ Sbjct: 302 ENTECYINGMSTSLPPDVQRAMIHSVHGMENAKIVRYGYAIEYDYVDPTELKHTLETKKV 361 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 L+ AGQ+NGTTGYEEAAAQG++AGIN+A + + R ++YIGV+IDDL +KG Sbjct: 362 KNLYCAGQLNGTTGYEEAAAQGMMAGINAALSLQGKEPLILRRDEAYIGVLIDDLVTKGT 421 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF-AKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR + AD RL G LG I + + +R K Q L+ L + Sbjct: 422 KEPYRMFTSRAEYRLLLREETADLRLGKYGHALGLIDDAQMERIETKRSQITEGLKLLEE 481 Query: 480 SLVLTSKNLSSTSISFKQDGKTR--TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 ++ +K + S ++ T T + +S F + L + P + + E++ Sbjct: 482 TVYTPNKEFLAFLASIDEEHITDKLTGIQLVSRKSFELDKLVKLIPSFAELDPYIQEQIL 541 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 IE+ YA Y +Q + + + IP+ FD+ S+ LSNE+ +KL P L AS+ Sbjct: 542 IEAKYARYVEKQSDDIERMNKMLHIAIPEGFDFRSVSGLSNEIVDKLYKFNPPTLQAASQ 601 Query: 598 IEGMTPAALNLLLIYIK 614 I G+TPAAL++L IYIK Sbjct: 602 ISGITPAALDILHIYIK 618 >gi|268593830|ref|ZP_06127997.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Neisseria gonorrhoeae 35/02] gi|268683301|ref|ZP_06150163.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Neisseria gonorrhoeae SK-92-679] gi|268547219|gb|EEZ42637.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Neisseria gonorrhoeae 35/02] gi|268623585|gb|EEZ55985.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Neisseria gonorrhoeae SK-92-679] Length = 631 Score = 519 bits (1337), Expect = e-145, Method: Compositional matrix adjust. Identities = 285/622 (45%), Positives = 388/622 (62%), Gaps = 14/622 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 8 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 67 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R+QADR LY+ +++ + +QENLD+ Q Sbjct: 68 ALGGAMALATDKSGIQFRRLNASKGAAVRATRSQADRILYKASIREMLENQENLDLFQQA 127 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E IS ++ + + VVLT GTFL G IHIG GR GD + SL Sbjct: 128 VEDVTLEGERISGVITAMGAEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 187 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT----DKITNRQIE 239 + GRLKTGTP R+DG+TI + + +Q D P M+ ++ RQ+ Sbjct: 188 GRLRELKLPQGRLKTGTPPRIDGRTIDFSQLTEQPGD---TPVPVMSVRGNAEMHPRQVS 244 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEG Sbjct: 245 CWITHTNTQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEG 304 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 305 LTTHEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKT 364 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG N+ + D + R +Y+GV++DDL +KG Sbjct: 365 IEGLFFAGQINGTTGYEEAAAQGLLAGANAVQYVRGQDPLLLRREQAYLGVLVDDLITKG 424 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 + EPYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + + LK Sbjct: 425 LNEPYRMFTSRAEYRLQLREDNADMRLTEDGYKIGLVGEAQWRMFNEKREAVEREIQRLK 484 Query: 480 SLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI---CPDARKFSSLVI 533 + + L+ + ++ + ++ L P+ L ++ P R S+ V+ Sbjct: 485 TTWYAPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGAIPSER-LSAEVV 543 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I+ Y Y RQ E + E +P DY + LS E+++KL+ KP + Sbjct: 544 EQVEIQVKYQGYIDRQNEEIDSRRDIETLKLPDGIDYGRVKGLSAEVQQKLNQHKPETVG 603 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I G+TPAA+ LL++++K+ Sbjct: 604 QASRISGVTPAAVALLMVHLKR 625 >gi|254494666|ref|ZP_05107837.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Neisseria gonorrhoeae 1291] gi|226513706|gb|EEH63051.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Neisseria gonorrhoeae 1291] Length = 631 Score = 519 bits (1337), Expect = e-145, Method: Compositional matrix adjust. Identities = 285/621 (45%), Positives = 386/621 (62%), Gaps = 12/621 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 8 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 67 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY+ +++ + +QENLD+ Q Sbjct: 68 ALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKASIREMLENQENLDLFQQA 127 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E IS ++ + VVLT GTFL G IHIG GR GD + SL Sbjct: 128 VEDVTLEGERISGVITAMGVEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 187 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT----DKITNRQIE 239 + GRLKTGTP R+DG+TI + + +Q D P M+ ++ RQ+ Sbjct: 188 GRLRELKLPQGRLKTGTPPRIDGRTIDFSQLTEQPGD---TPVPVMSVRGNAEMHPRQVS 244 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEG Sbjct: 245 CWITHTNTQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEG 304 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 305 LTTHEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKT 364 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG N+ + D + R +Y+GV++DDL +KG Sbjct: 365 IEGLFFAGQINGTTGYEEAAAQGLLAGANAVQYVRGQDPLLLRREQAYLGVLVDDLITKG 424 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 + EPYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + + LK Sbjct: 425 LNEPYRMFTSRAEYRLQLREDNADMRLTEDGYKIGLVGEAQWRMFNEKREAVEREIQRLK 484 Query: 480 SLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI--CPDARKFSSLVIE 534 + T + L+ + ++ + ++ L P+ L ++ + S+ VIE Sbjct: 485 TTWYTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGAMPSENLSAEVIE 544 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E + E +P DY + LS E+++KL+ KP + Q Sbjct: 545 QVEIQVKYQGYIDRQNEEIDSRRDIETLKLPDGIDYGRVKGLSAEVQQKLNQHKPETVGQ 604 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G+TPAA+ LL++++K+ Sbjct: 605 ASRISGVTPAAVALLMVHLKR 625 >gi|240081631|ref|ZP_04726174.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria gonorrhoeae FA19] gi|268597727|ref|ZP_06131894.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Neisseria gonorrhoeae FA19] gi|268599974|ref|ZP_06134141.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Neisseria gonorrhoeae MS11] gi|268551515|gb|EEZ46534.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Neisseria gonorrhoeae FA19] gi|268584105|gb|EEZ48781.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Neisseria gonorrhoeae MS11] Length = 631 Score = 519 bits (1337), Expect = e-145, Method: Compositional matrix adjust. Identities = 286/622 (45%), Positives = 387/622 (62%), Gaps = 14/622 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 8 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 67 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY+ +++ + +QENLD+ Q Sbjct: 68 ALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKASIREMLENQENLDLFQQA 127 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E IS ++ + VVLT GTFL G IHIG GR GD + SL Sbjct: 128 VEDVTLEGERISGVITAMGVEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 187 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT----DKITNRQIE 239 + GRLKTGTP R+DG+TI + + +Q D P M+ ++ RQ+ Sbjct: 188 GRLRELKLPQGRLKTGTPPRIDGRTIDFSQLTEQPGD---TPVPVMSVRGNAEMHPRQVS 244 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEG Sbjct: 245 CWITHTNTQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEG 304 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 305 LTTHEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKT 364 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG N+ + D + R +Y+GV++DDL +KG Sbjct: 365 IEGLFFAGQINGTTGYEEAAAQGLLAGANAVQYVRGQDPLLLRREQAYLGVLVDDLITKG 424 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 + EPYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + + LK Sbjct: 425 LNEPYRMFTSRAEYRLQLREDNADMRLTEDGYKIGLVGEAQWRMFNEKREAVEREIQRLK 484 Query: 480 SLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI---CPDARKFSSLVI 533 + T + L+ + ++ + ++ L P+ L ++ P R S+ V+ Sbjct: 485 TTWYTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGAIPSER-LSAEVV 543 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I+ Y Y RQ E + E +P DY + LS E+++KL+ KP + Sbjct: 544 EQVEIQVKYQGYIDRQNEEIDSRRDIETLKLPDGIDYGRVKGLSAEVQQKLNQHKPETVG 603 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I G+TPAA+ LL++++K+ Sbjct: 604 QASRISGVTPAAVALLMVHLKR 625 >gi|261391729|emb|CAX49178.1| glucose-inhibited division protein A [Neisseria meningitidis 8013] Length = 628 Score = 519 bits (1337), Expect = e-145, Method: Compositional matrix adjust. Identities = 285/621 (45%), Positives = 387/621 (62%), Gaps = 12/621 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L++H T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 5 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLSHNIETLGQMSCNPSIGGIGKGHLVRELD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY+ A++ + +QENLD+ Q Sbjct: 65 ALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKAAIREMLENQENLDLFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + IS ++ + VVLT GTFL G IHIG GR GD + SL Sbjct: 125 VEDVTLDGERISGVITAMGVEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK----ITNRQIE 239 + + GRLKTGTP R+DG+TI + + +Q D P M+ + + RQ+ Sbjct: 185 GRLHELNLPQGRLKTGTPPRIDGRTIDFSQLTEQPGD---TPVPVMSVRGNADMHPRQVS 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEG Sbjct: 242 CWITHTNTQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 302 LTTHEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKT 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG N+ + D + R +Y+GV++DDL +KG Sbjct: 362 IEGLFFAGQINGTTGYEEAAAQGLLAGANAVQYVRGQDPLLLRREQAYLGVLVDDLITKG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 V EPYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + + LK Sbjct: 422 VNEPYRMFTSRAEYRLQLREDNADMRLTEDGYKIGLVGEAQWRMFNEKREAIEREIQRLK 481 Query: 480 SLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI--CPDARKFSSLVIE 534 + T + L+ + ++ + ++ L P+ L ++ + S+ VIE Sbjct: 482 TTWYTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGAMPSENLSAEVIE 541 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E + E +P DY + LS E+++KL+ KP + Q Sbjct: 542 QVEIQVKYQGYIDRQNEEIDSRRDIETLKLPDGIDYGKVKGLSAEVQQKLNQHKPETVGQ 601 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G+TPAA+ LL++++K+ Sbjct: 602 ASRISGVTPAAVALLMVHLKR 622 >gi|325105730|ref|YP_004275384.1| glucose inhibited division protein A [Pedobacter saltans DSM 12145] gi|324974578|gb|ADY53562.1| glucose inhibited division protein A [Pedobacter saltans DSM 12145] Length = 620 Score = 519 bits (1337), Expect = e-145, Method: Compositional matrix adjust. Identities = 281/630 (44%), Positives = 393/630 (62%), Gaps = 25/630 (3%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M N+ YDVIV+GGGHAGCEAA AA LG+ T LIT TI MSCNPA+GG+ KG ++R Sbjct: 1 MFNK-YDVIVVGGGHAGCEAATAAANLGSKTLLITMNMGTIAQMSCNPAMGGVAKGQILR 59 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADR----ELYRLAMQREILSQEN 116 EIDA+ G G +AD + IQFR+LN KGPA+ PRTQ DR E +RL +++ N Sbjct: 60 EIDAMGGKSGIIADVSTIQFRMLNRSKGPAMWSPRTQNDRMRFAEEWRLTLEQ----TPN 115 Query: 117 LDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGD 176 LD+ Q V + N + + I +VVLT GTFL G+IHIG+ ++ GR G+ Sbjct: 116 LDIWQDMVNRLIIKDNKVCGVQTSLGVKIESESVVLTNGTFLNGIIHIGEKQMGGGRTGE 175 Query: 177 SPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR 236 + + ++ F+ GR+KTGTP R+DG+++ + E+Q+ D FS+ K T + Sbjct: 176 KSATGITEHLVELGFEAGRMKTGTPPRVDGRSLNYSVMEEQWGDTDGGKFSYTDTKTTLQ 235 Query: 237 QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLE 296 Q C IT TN + H + E + S +++G IK GPRYCPSIEDKI RF ER HQIF+E Sbjct: 236 QRCCWITYTNDKVHETLKEGFEKSPMFTGRIKGLGPRYCPSIEDKINRFAERERHQIFVE 295 Query: 297 PEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLE 356 PEG T +Y NG ST+LPE++Q + IR IPG E + RPGYAIEYDY P++L TLE Sbjct: 296 PEGEKTVEIYVNGFSTSLPEDVQFKAIRLIPGFENAKLYRPGYAIEYDYFPPQQLDLTLE 355 Query: 357 TKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 T I LF AGQINGTTGYEEAAAQG VAG+N+ +K N + R++SYIGV+IDDL Sbjct: 356 TLLIKNLFFAGQINGTTGYEEAAAQGFVAGVNAHQKVNDKHELILKRSESYIGVLIDDLV 415 Query: 417 SKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRS 476 +KG EPYRMFTSRAE+R+ LR DNAD RL+PIG LG + E R ++ I N + Sbjct: 416 TKGTEEPYRMFTSRAEHRLLLRQDNADERLSPIGYDLGLVSEERLQKVKDKISNANAIIE 475 Query: 477 LLKSLVLTS-------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNL--FSICPDA-- 525 K + L++ + L++++I+ Y L+ P +++L S D Sbjct: 476 KAKEIKLSTTEANPFLEKLNTSTITHGTK-----LYNLLTRPQIEVKDLRVMSSTFDTYL 530 Query: 526 RKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 +F + IE+ +I+ Y +Y +++ +++K E + I +FDY++L +LS E +EKL Sbjct: 531 TQFDNETIEQAEIKIKYESYFDKELEIVEKMKKMEDKEINPNFDYNTLTSLSKESREKLI 590 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 +KP L QAS+I G+ P+ + +L++++ K Sbjct: 591 KIKPRTLGQASRISGVKPSDITILMVHMSK 620 >gi|319411321|emb|CBY91732.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG Glucose-inhibited division protein A [Neisseria meningitidis WUE 2594] Length = 642 Score = 519 bits (1337), Expect = e-145, Method: Compositional matrix adjust. Identities = 285/618 (46%), Positives = 386/618 (62%), Gaps = 6/618 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 19 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 78 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY+ A++ + +QENLD+ Q Sbjct: 79 ALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKAAIREMLENQENLDLFQQA 138 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + IS ++ + VVLT GTFL G IHIG GR GD + SL Sbjct: 139 VEDVTLDGERISGVITAMGVEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 198 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + GRLKTGTP R+DG+TI + + +Q D + S + ++ RQ+ C I Sbjct: 199 GRLRELKLPQGRLKTGTPPRIDGRTIDFSQLTEQPGDTPVPVMSVRGNAEMHPRQVSCWI 258 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEGL T Sbjct: 259 THTNTQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEGLTT 318 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK I G Sbjct: 319 YEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKTIEG 378 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AG N+ + D + R +Y+GV++DDL +KGV E Sbjct: 379 LFFAGQINGTTGYEEAAAQGLLAGANAVQYVRGQDPLLLRREQAYLGVLVDDLITKGVNE 438 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + + LK+ Sbjct: 439 PYRMFTSRAEYRLQLREDNADMRLTEDGYKIGLVGEAQWRMFNEKREAVEREIQRLKTTW 498 Query: 483 LTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI--CPDARKFSSLVIERLQ 537 T + L+ + ++ + ++ L P+ L ++ + S+ VIE+++ Sbjct: 499 YTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGAMPSENLSAEVIEQVE 558 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ Y Y RQ E + E +P DY + LS E+++KL+ KP + QAS+ Sbjct: 559 IQVKYQGYIDRQNEEIDSRRDIETLKLPDGIDYGKVKGLSAEVQQKLNQHKPETVGQASR 618 Query: 598 IEGMTPAALNLLLIYIKK 615 I G+TPAA+ LL++++K+ Sbjct: 619 ISGVTPAAVALLMVHLKR 636 >gi|169333909|ref|ZP_02861102.1| hypothetical protein ANASTE_00295 [Anaerofustis stercorihominis DSM 17244] gi|169259474|gb|EDS73440.1| hypothetical protein ANASTE_00295 [Anaerofustis stercorihominis DSM 17244] Length = 625 Score = 519 bits (1337), Expect = e-145, Method: Compositional matrix adjust. Identities = 275/616 (44%), Positives = 390/616 (63%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAGCEAA +A+ G+ST L+T + M CNP+IGG GKGHLVREIDAL Sbjct: 8 YDVIVIGAGHAGCEAALASARKGSSTLLLTLNLDALAMMPCNPSIGGTGKGHLVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ D IQ + LN KG AV+ R QAD++ Y+ M+ I + +NLD+ Q E Sbjct: 68 GGEMGKNIDKTFIQTKTLNTAKGVAVQSLRAQADKKKYQEEMKFVIENTDNLDLKQQEAV 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 TE +S ++ +M + +V+ +GT+L+G I IG + G G P+N L +S Sbjct: 128 EILTEDGKVSGVITHTGAMYKTKAIVICSGTYLKGRIIIGDVSYSGGPNGIFPANKLSDS 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK--ITNRQIECGIT 243 K F RLKTGTPAR++ ++I + K E QF D+ + PFSF + + + C + Sbjct: 188 LKKLGFKLLRLKTGTPARVNKRSIDFSKMEIQFGDKEITPFSFENEDKDLEYDEQPCYLA 247 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I +N+ S +YSG+I GPRYCPSIEDKIVRF ++ HQ+F+EPEGLNT+ Sbjct: 248 YTNEKTHEVINDNLHRSPLYSGNITGIGPRYCPSIEDKIVRFADKERHQLFVEPEGLNTN 307 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G+S++LPE++Q +F+RTI GLE V I+R YAIEYD + P ++ +LE+K + GL Sbjct: 308 EMYLQGMSSSLPEDVQVKFLRTIKGLENVEIMRVAYAIEYDAVEPTQIELSLESKIVKGL 367 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGT+GYEEAAAQGL+AGIN+A + + R+ SYIGV+IDD+T+KG EP Sbjct: 368 FTAGQINGTSGYEEAAAQGLIAGINAANYVQNREPLILDRSSSYIGVLIDDITTKGTKEP 427 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSR EYR+ LR DNAD RLTP G + G I + R +R Y + N ++ LK + + Sbjct: 428 YRMFTSRVEYRLLLRQDNADLRLTPYGFEQGLISKERYERLLGYEETVNKEKARLKEIKI 487 Query: 484 T---SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 T N+ SI T T Y+ + P S + + + S V ++++I+ Sbjct: 488 TPSNENNIKLESIGTTPLKNTITVYDLIKRPKISYDDTKIFDENRPELSRRVKQQVEIQI 547 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y +Q + K EK+++P+D +Y+ + L E ++KL ++P NL QAS+I G Sbjct: 548 KYHDYIIKQQASIDKFKSMEKKVLPEDINYNEIKNLRLEARQKLEDIRPKNLGQASRISG 607 Query: 601 MTPAALNLLLIYIKKN 616 ++P+ +N+LLI + KN Sbjct: 608 VSPSDINVLLIELAKN 623 >gi|268602312|ref|ZP_06136479.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Neisseria gonorrhoeae PID18] gi|268586443|gb|EEZ51119.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Neisseria gonorrhoeae PID18] Length = 631 Score = 519 bits (1337), Expect = e-145, Method: Compositional matrix adjust. Identities = 284/621 (45%), Positives = 387/621 (62%), Gaps = 12/621 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 8 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 67 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R+QADR LY+ +++ + +QENLD+ Q Sbjct: 68 ALGGAMALATDKSGIQFRRLNASKGAAVRATRSQADRILYKASIREMLENQENLDLFQQA 127 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E IS ++ + + VVLT GTFL G IHIG GR GD + SL Sbjct: 128 VEDVTLEGERISGVITAMGAEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 187 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT----DKITNRQIE 239 + GRLKTGTP R+DG+TI + + +Q D P M+ ++ Q+ Sbjct: 188 GRLRELKLPQGRLKTGTPPRIDGRTIDFSQLTEQPGD---TPVPVMSVRGNAEMHPHQVS 244 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEG Sbjct: 245 CWITHTNTQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEG 304 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 305 LTTHEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKT 364 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG N+ + D + R +Y+GV++DDL +KG Sbjct: 365 IEGLFFAGQINGTTGYEEAAAQGLLAGANAVQYVRGQDPLLLRREQAYLGVLVDDLITKG 424 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 + EPYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + + LK Sbjct: 425 LNEPYRMFTSRAEYRLQLREDNADMRLTEDGYKIGLVGEAQWRMFNEKREAVEREIQRLK 484 Query: 480 SLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI--CPDARKFSSLVIE 534 + T + L+ + ++ + ++ L P+ L ++ + S+ VIE Sbjct: 485 TTWYTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGAMPSENLSAEVIE 544 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E + E +P DY + LS E+++KL+ KP + Q Sbjct: 545 QVEIQVKYQGYIDRQNEEIDSRRDIETLKLPDGIDYGRVKGLSAEVQQKLNQHKPETVGQ 604 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G+TPAA+ LL++++K+ Sbjct: 605 ASRISGVTPAAVALLMVHLKR 625 >gi|59802107|ref|YP_208819.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria gonorrhoeae FA 1090] gi|81170561|sp|Q5F5Y0|MNMG_NEIG1 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|59719002|gb|AAW90407.1| putative glucose inhibited division protein A [Neisseria gonorrhoeae FA 1090] Length = 628 Score = 519 bits (1337), Expect = e-145, Method: Compositional matrix adjust. Identities = 285/621 (45%), Positives = 386/621 (62%), Gaps = 12/621 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 5 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY+ +++ + +QENLD+ Q Sbjct: 65 ALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKASIREMLENQENLDLFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E IS ++ + VVLT GTFL G IHIG GR GD + SL Sbjct: 125 VEDVTLEGERISGVITAMGVEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT----DKITNRQIE 239 + GRLKTGTP R+DG+TI + + +Q D P M+ ++ RQ+ Sbjct: 185 GRLRELKLPQGRLKTGTPPRIDGRTIDFSQLTEQPGD---TPVPVMSVRGNAEMHPRQVS 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEG Sbjct: 242 CWITHTNTQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 302 LTTHEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKT 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG N+ + D + R +Y+GV++DDL +KG Sbjct: 362 IEGLFFAGQINGTTGYEEAAAQGLLAGANAVQYVRGQDPLLLRREQAYLGVLVDDLITKG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 + EPYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + + LK Sbjct: 422 LNEPYRMFTSRAEYRLQLREDNADMRLTEDGYKIGLVGEAQWRMFNEKREAVEREIQRLK 481 Query: 480 SLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI--CPDARKFSSLVIE 534 + T + L+ + ++ + ++ L P+ L ++ + S+ VIE Sbjct: 482 TTWYTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGAMPSENLSAEVIE 541 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E + E +P DY + LS E+++KL+ KP + Q Sbjct: 542 QVEIQVKYQGYIDRQNEEIDSRRDIETLKLPDGIDYGRVKGLSAEVQQKLNQHKPETVGQ 601 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G+TPAA+ LL++++K+ Sbjct: 602 ASRISGVTPAAVALLMVHLKR 622 >gi|254670417|emb|CBA05990.1| glucose inhibited division protein A [Neisseria meningitidis alpha153] Length = 642 Score = 519 bits (1336), Expect = e-145, Method: Compositional matrix adjust. Identities = 284/621 (45%), Positives = 386/621 (62%), Gaps = 12/621 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 19 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 78 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY+ A++ + +QENLD+ Q Sbjct: 79 ALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKAAIREMLENQENLDLFQQA 138 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E IS ++ + VVLT GTFL G IHIG GR GD + SL Sbjct: 139 VEDVTLEGERISGVITAMGVEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 198 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT----DKITNRQIE 239 + GRLKTGTP R+DG+TI + + +Q D P M+ ++ Q+ Sbjct: 199 GRLRELKLPQGRLKTGTPPRIDGRTIDFSQLTEQPGD---TPVPVMSVRGSAEMHPHQVS 255 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEG Sbjct: 256 CWITHTNTQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEG 315 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 316 LTTHEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKT 375 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG N+ + D + R +Y+GV++DDL +KG Sbjct: 376 IEGLFFAGQINGTTGYEEAAAQGLLAGANAVQYVRGQDPLLLRREQAYLGVLVDDLITKG 435 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 V EPYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + + LK Sbjct: 436 VNEPYRMFTSRAEYRLQLREDNADMRLTEDGYKIGLVGEAQWRMFNEKREAIEREIQRLK 495 Query: 480 SLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI--CPDARKFSSLVIE 534 + T + L+ + ++ + ++ L P+ L ++ + + ++ V+E Sbjct: 496 TTWYTPQKLAEDEQIRVFGQKLNREANLHDLLRRPNLDYAALMTLEGAMPSERLAAEVVE 555 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E + E +P DY + LS E+++KL+ KP + Q Sbjct: 556 QVEIQVKYQGYIDRQNEEIDSRRDIETLKLPDGIDYGKVKGLSAEVQQKLNQHKPETVGQ 615 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G+TPAA+ LL++++K+ Sbjct: 616 ASRISGVTPAAVALLMVHLKR 636 >gi|327540978|gb|EGF27534.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Rhodopirellula baltica WH47] Length = 667 Score = 519 bits (1336), Expect = e-145, Method: Compositional matrix adjust. Identities = 284/623 (45%), Positives = 384/623 (61%), Gaps = 21/623 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+VIG GHAG EAAA AA+LGA TAL+T T+G MSCNPAIGG+ KG +VRE+DAL Sbjct: 26 YDVVVIGAGHAGTEAAAAAARLGAKTALLTTNLDTVGQMSCNPAIGGVAKGQIVREVDAL 85 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLMG DA GIQFR+LN +KGPA+ PR QAD++ Y+ ++ I +Q+NLD+ Q V Sbjct: 86 GGLMGEAIDATGIQFRMLNRRKGPAMHSPRAQADKKAYQNFIKYRIETQDNLDLRQETVE 145 Query: 126 GFNTE----------KNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMG 175 TE + + ++ +++ TV+LTTGTFL+ ++H GK + GR G Sbjct: 146 DLITEPIADGQDRLANQRVIGVRVRGDAVYHAPTVILTTGTFLQAIMHTGKSQSAGGRAG 205 Query: 176 DSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN 235 + + L + + F R KTGTP RL+ +TI + E+Q D+ PFS++ D I++ Sbjct: 206 EGTTAGLSGALKRMGFTLDRFKTGTPPRLNARTIDYSGLEEQPGDDDPQPFSYLNDAISS 265 Query: 236 RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFL 295 Q+ C I TN H +I N+ + +YSG I S GPRYCPSIEDK+VRF +++ HQ+FL Sbjct: 266 PQMACHIAHTNERVHDLIRANLGRAPMYSGQIDSRGPRYCPSIEDKVVRFADKSSHQLFL 325 Query: 296 EPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTL 355 EPEG T VY NGIST+LP ++Q R IPGLEK I+R GYA+EYDY P +L+P L Sbjct: 326 EPEGRQTCEVYVNGISTSLPRDVQDAMFRCIPGLEKAAIMRYGYAVEYDYCPPTQLWPHL 385 Query: 356 ETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDL 415 E+K +SGLF AGQINGTTGYEEAA QGL+AG+N+AR + SR D+YIGV++DDL Sbjct: 386 ESKSVSGLFFAGQINGTTGYEEAAGQGLIAGLNAARTAASKTPWVPSRQDAYIGVLVDDL 445 Query: 416 TSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLR 475 + G EPYRMFTSRAEYR+ LR DNAD RLT +LG I R++RF + + E Sbjct: 446 VTSGTDEPYRMFTSRAEYRLLLRQDNADRRLTAQADELGLIDAARRERFHRKLAEIERGT 505 Query: 476 SLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIER 535 LL+ + G T +L P+ + + P+ E+ Sbjct: 506 ELLQQAKFQPET-----------GPTVRGDVYLRRPEVTWNVIAEQVPELAGIGREAAEQ 554 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 I+ YA Y RQ E + ++ IP FDY + L NE KEKL+ ++P NL QA Sbjct: 555 CSIDIKYAGYIDRQQAEVHKQSRHAEKSIPVSFDYDKIGPLRNEAKEKLTKVRPLNLGQA 614 Query: 596 SKIEGMTPAALNLLLIYIKKNTV 618 +I G+TPA L L+L +++ N++ Sbjct: 615 KRISGITPADLALVLAHLENNSL 637 >gi|218767114|ref|YP_002341626.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria meningitidis Z2491] gi|21263693|sp|Q9JX41|MNMG_NEIMA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|121051122|emb|CAM07393.1| glucose inhibited division protein A homolog [Neisseria meningitidis Z2491] gi|325133107|gb|EGC55779.1| glucose-inhibited division protein A [Neisseria meningitidis M6190] gi|325139085|gb|EGC61631.1| glucose-inhibited division protein A [Neisseria meningitidis ES14902] Length = 628 Score = 519 bits (1336), Expect = e-145, Method: Compositional matrix adjust. Identities = 286/621 (46%), Positives = 386/621 (62%), Gaps = 12/621 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 5 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY+ A++ + +QENLD+ Q Sbjct: 65 ALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKAAIREMLENQENLDLFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + IS ++ + VVLT GTFL G IHIG GR GD + SL Sbjct: 125 VEDVTLDGERISGVITAMGVEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT----DKITNRQIE 239 + GRLKTGTP R+DG+TI + + +Q D P M+ ++ RQ+ Sbjct: 185 GRLRELKLPQGRLKTGTPPRIDGRTIDFSQLTEQPGD---TPVPVMSVRGNAEMHPRQVS 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEG Sbjct: 242 CWITHTNTQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 302 LTTYEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKT 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG N+ + D + R +Y+GV++DDL +KG Sbjct: 362 IEGLFFAGQINGTTGYEEAAAQGLLAGANAVQYVRGQDPLLLRREQAYLGVLVDDLITKG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 V EPYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + + LK Sbjct: 422 VNEPYRMFTSRAEYRLQLREDNADMRLTEDGYKIGLVGEAQWRMFNEKREAVEREIQRLK 481 Query: 480 SLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI--CPDARKFSSLVIE 534 + T + L+ + ++ + ++ L P+ L ++ + S+ VIE Sbjct: 482 TTWYTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGAMPSENLSAEVIE 541 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E + E +P DY + LS E+++KL+ KP + Q Sbjct: 542 QVEIQVKYQGYIDRQNEEIDSRRDIETLKLPDGIDYGKVKGLSAEVQQKLNQHKPETVGQ 601 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G+TPAA+ LL++++K+ Sbjct: 602 ASRISGVTPAAVALLMVHLKR 622 >gi|325135119|gb|EGC57746.1| glucose-inhibited division protein A [Neisseria meningitidis M13399] Length = 628 Score = 519 bits (1336), Expect = e-145, Method: Compositional matrix adjust. Identities = 285/621 (45%), Positives = 387/621 (62%), Gaps = 12/621 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 5 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY+ A++ + +QENLD+ Q Sbjct: 65 ALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKAAIREMLENQENLDLFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + IS ++ + VVLT GTFL G IHIG GR GD + SL Sbjct: 125 VEDVTLDGERISGVITAMGVEFKARAVVLTAGTFLSGKIHIGLEHYEGGRAGDPAAKSLG 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT----DKITNRQIE 239 + GRLKTGTP R+DG+TI + + +Q D P M+ ++ RQ+ Sbjct: 185 GRLRELKLPQGRLKTGTPPRIDGRTIDFSQLTEQPGD---TPVPVMSVRGNAEMHPRQVS 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEG Sbjct: 242 CWITHTNTQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 302 LTTHEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKT 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I+GLF AGQINGTTGYEEAAAQGL+AG N+ + + D + R +Y+GV++DDL +KG Sbjct: 362 IAGLFFAGQINGTTGYEEAAAQGLLAGANAVQYVREQDPLLLRREQAYLGVLVDDLITKG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 V EPYRMFTSRAEYR+ LR DNAD RLT G K+G + E + + F + + LK Sbjct: 422 VNEPYRMFTSRAEYRLQLREDNADMRLTEDGYKIGLVSEAQWRMFNEKREAVEREIQRLK 481 Query: 480 SLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI--CPDARKFSSLVIE 534 + T + L+ + ++ + ++ L P+ L ++ + S+ VIE Sbjct: 482 TTWYTPQKLAEGEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGAMPSENLSAEVIE 541 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E + E +P DY + LS E+++KL+ KP + Q Sbjct: 542 QVEIQVKYQGYIDRQNEEIDSRRDIETLKLPDGIDYGKVKGLSAEVQQKLNQHKPETVGQ 601 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G+TPAA+ LL++++K+ Sbjct: 602 ASRISGVTPAAVALLMVHLKR 622 >gi|240116644|ref|ZP_04730706.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria gonorrhoeae PID18] Length = 642 Score = 519 bits (1336), Expect = e-145, Method: Compositional matrix adjust. Identities = 283/618 (45%), Positives = 387/618 (62%), Gaps = 6/618 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 19 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 78 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R+QADR LY+ +++ + +QENLD+ Q Sbjct: 79 ALGGAMALATDKSGIQFRRLNASKGAAVRATRSQADRILYKASIREMLENQENLDLFQQA 138 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E IS ++ + + VVLT GTFL G IHIG GR GD + SL Sbjct: 139 VEDVTLEGERISGVITAMGAEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 198 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + GRLKTGTP R+DG+TI + + +Q D + S + ++ Q+ C I Sbjct: 199 GRLRELKLPQGRLKTGTPPRIDGRTIDFSQLTEQPGDTPVPVMSVRGNAEMHPHQVSCWI 258 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEGL T Sbjct: 259 THTNTQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEGLTT 318 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK I G Sbjct: 319 HEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKTIEG 378 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AG N+ + D + R +Y+GV++DDL +KG+ E Sbjct: 379 LFFAGQINGTTGYEEAAAQGLLAGANAVQYVRGQDPLLLRREQAYLGVLVDDLITKGLNE 438 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + + LK+ Sbjct: 439 PYRMFTSRAEYRLQLREDNADMRLTEDGYKIGLVGEAQWRMFNEKREAVEREIQRLKTTW 498 Query: 483 LTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI--CPDARKFSSLVIERLQ 537 T + L+ + ++ + ++ L P+ L ++ + S+ VIE+++ Sbjct: 499 YTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGAMPSENLSAEVIEQVE 558 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ Y Y RQ E + E +P DY + LS E+++KL+ KP + QAS+ Sbjct: 559 IQVKYQGYIDRQNEEIDSRRDIETLKLPDGIDYGRVKGLSAEVQQKLNQHKPETVGQASR 618 Query: 598 IEGMTPAALNLLLIYIKK 615 I G+TPAA+ LL++++K+ Sbjct: 619 ISGVTPAAVALLMVHLKR 636 >gi|317165423|gb|ADV08964.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria gonorrhoeae TCDC-NG08107] Length = 655 Score = 518 bits (1335), Expect = e-145, Method: Compositional matrix adjust. Identities = 285/622 (45%), Positives = 388/622 (62%), Gaps = 14/622 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 32 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 91 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R+QADR LY+ +++ + +QENLD+ Q Sbjct: 92 ALGGAMALATDKSGIQFRRLNASKGAAVRATRSQADRILYKASIREMLENQENLDLFQQA 151 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E IS ++ + + VVLT GTFL G IHIG GR GD + SL Sbjct: 152 VEDVTLEGERISGVITAMGAEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 211 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT----DKITNRQIE 239 + GRLKTGTP R+DG+TI + + +Q D P M+ ++ RQ+ Sbjct: 212 GRLRELKLPQGRLKTGTPPRIDGRTIDFSQLTEQPGD---TPVPVMSVRGNAEMHPRQVS 268 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEG Sbjct: 269 CWITHTNTQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEG 328 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 329 LTTHEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKT 388 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG N+ + D + R +Y+GV++DDL +KG Sbjct: 389 IEGLFFAGQINGTTGYEEAAAQGLLAGANAVQYVRGQDPLLLRREQAYLGVLVDDLITKG 448 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 + EPYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + + LK Sbjct: 449 LNEPYRMFTSRAEYRLQLREDNADMRLTEDGYKIGLVGEAQWRMFNEKREAVEREIQRLK 508 Query: 480 SLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI---CPDARKFSSLVI 533 + + L+ + ++ + ++ L P+ L ++ P R S+ V+ Sbjct: 509 TTWYAPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGAIPSER-LSAEVV 567 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I+ Y Y RQ E + E +P DY + LS E+++KL+ KP + Sbjct: 568 EQVEIQVKYQGYIDRQNEEIDSRRDIETLKLPDGIDYGRVKGLSAEVQQKLNQHKPETVG 627 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I G+TPAA+ LL++++K+ Sbjct: 628 QASRISGVTPAAVALLMVHLKR 649 >gi|312897435|ref|ZP_07756859.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Megasphaera micronuciformis F0359] gi|310621496|gb|EFQ05032.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Megasphaera micronuciformis F0359] Length = 639 Score = 518 bits (1335), Expect = e-145, Method: Compositional matrix adjust. Identities = 271/614 (44%), Positives = 384/614 (62%), Gaps = 3/614 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAGCEAA AA++ T LIT I M CNPAIGG GK HLV+EIDA Sbjct: 15 TYDVIVVGAGHAGCEAALAAARMKMHTLLITLNLDNIALMPCNPAIGGPGKSHLVKEIDA 74 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG VAD IQ R+LN KGPAV R Q+D++ Y+ M + ++ NLDV Q V Sbjct: 75 LGGQMGLVADNTAIQMRMLNTGKGPAVYSLRAQSDKKAYQSEMTHILENEANLDVKQLTV 134 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E I+ + + V+L TGT+L+G I IG + +G +G + +L + Sbjct: 135 TDLIVEDKIVKGVYTELGETFLAKAVILATGTYLKGRIIIGTTVLESGPIGQRSAEALSD 194 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S K+ R KTGTPAR+D +T+ D EKQ D FSF+++++ ++ C +T Sbjct: 195 SLKKYGISLMRFKTGTPARIDSRTLRTDSMEKQEGDNEGHAFSFLSERLNRNKVCCWLTY 254 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ + + +G I+ GPRYCPSIE KI+RF ++ HQ+F+EPEGL T+ Sbjct: 255 TNERTHEIIRSNLDRAPMCNGVIEGIGPRYCPSIESKILRFADKKRHQLFVEPEGLKTEE 314 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+ST+LP ++Q++F++TIPGLE V I+RPGYAIEYD ++P +L PTLE KKI GL+ Sbjct: 315 MYVQGMSTSLPMDVQYEFLKTIPGLEDVKIMRPGYAIEYDCLDPLQLLPTLEVKKIRGLY 374 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ NGT+GYEEAAAQGL+AGIN+A K K D +R ++YIGV+IDDL +KG EPY Sbjct: 375 SAGQANGTSGYEEAAAQGLIAGINAALKIQKKDPFVLTRAEAYIGVLIDDLVTKGTNEPY 434 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSR+EYR+ LR DNAD RLT G +LG + + R F K +E + L S+LK L +T Sbjct: 435 RMMTSRSEYRLILRQDNADMRLTEKGRELGLVTDERYAAFCKKKEEVDELLSVLKKLSVT 494 Query: 485 SKNLSSTSISFKQDGKTRT---AYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 ++ + +T + L + + + + + + + V E ++I Sbjct: 495 PTTRTNELLESVGSAPLKTGIKGVDLLRRQEMTYSLMKKLFSELKDYPLDVTEEVEITVK 554 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y RQ + ++ E+RL+P DY ++ +S+E ++KLS ++P +L QAS+I G+ Sbjct: 555 YEGYIERQREQVAKMNKLEQRLLPDSIDYEAIDTISSEGRQKLSDIRPRSLGQASRISGV 614 Query: 602 TPAALNLLLIYIKK 615 +PA + LLIY ++ Sbjct: 615 SPADITALLIYTEQ 628 >gi|16081153|ref|NP_391981.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus subtilis subsp. subtilis str. 168] gi|221312084|ref|ZP_03593931.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus subtilis subsp. subtilis str. 168] gi|221316409|ref|ZP_03598214.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221321322|ref|ZP_03602616.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus subtilis subsp. subtilis str. JH642] gi|221325605|ref|ZP_03606899.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus subtilis subsp. subtilis str. SMY] gi|321313662|ref|YP_004205949.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus subtilis BSn5] gi|121187|sp|P25812|MNMG_BACSU RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|40026|emb|CAA44404.1| unnamed protein product [Bacillus subtilis] gi|467385|dbj|BAA05231.1| unknown [Bacillus subtilis] gi|2636648|emb|CAB16138.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Bacillus subtilis subsp. subtilis str. 168] gi|291486740|dbj|BAI87815.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus subtilis subsp. natto BEST195] gi|320019936|gb|ADV94922.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus subtilis BSn5] Length = 628 Score = 518 bits (1335), Expect = e-145, Method: Compositional matrix adjust. Identities = 271/618 (43%), Positives = 381/618 (61%), Gaps = 7/618 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAG EAA +A+ GA T ++T + M CNP++GG KG +VREIDAL Sbjct: 8 YDVIVIGAGHAGVEAALASARQGAKTLVLTINLDMVAFMPCNPSVGGPAKGIVVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MGR D IQ R+LN KGPAVR R QAD+ Y+ M+ + + NL ++QG V Sbjct: 68 GGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFQYQHEMKNTLEKEPNLTLLQGIVE 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E ++ Q + R VV+TTGT+LRG I +G L +G PS L Sbjct: 128 RLIVEDGECRGVITQTGAHYRAKAVVMTTGTYLRGRIILGDLSYSSGPNNQQPSIKLSEH 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + FD R KTGTP R+ TI + KTE Q D+ FS+ T + Q+ C +T T Sbjct: 188 LEELGFDLVRFKTGTPPRVKSDTIDYSKTEIQPGDDVPRAFSYETVEYITDQLPCWLTYT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 + ETH II N+ S +YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT V Sbjct: 248 SPETHEIIDSNLHRSPMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQEV 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+ST+LPE++Q + + TIPGLE V ++R GYAIEYD I P +L+PTLETKKI+ L+ Sbjct: 308 YVQGLSTSLPEDVQQRMLATIPGLENVQMMRAGYAIEYDAIVPTQLWPTLETKKITNLYT 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGT+GYEEAA QG++AGIN+ RK+ + + SR+D+YIGV+IDDL +KG EPYR Sbjct: 368 AGQINGTSGYEEAAGQGIMAGINAGRKALGKEEVILSRSDAYIGVLIDDLVTKGTNEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL-- 483 + TSRAEYR+ LR DNAD RLT IG ++G I + R F K + L S+++ Sbjct: 428 LLTSRAEYRLLLRHDNADLRLTEIGHRIGLISDERYAAFEKKKAAIEAEKKRLHSVIIKP 487 Query: 484 ---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + + S S +DG T + + P+ + + + + P V E+++I+ Sbjct: 488 SPENQEYIRSLGGSELKDGVRGT--DLMKRPEMNYETVTKLAPPEVPVPQDVAEQVEIQV 545 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y + + + +++K E + IP DY ++ ++ E ++KL ++P ++ QAS+I G Sbjct: 546 KYEGYIEKSLQQVEKLKKMENKKIPDRIDYDAIKGIATEARQKLKNVRPLSVAQASRISG 605 Query: 601 MTPAALNLLLIYIKKNTV 618 + PA +++LL+Y+++ + Sbjct: 606 VNPADISILLVYLEQGRI 623 >gi|15618527|ref|NP_224813.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Chlamydophila pneumoniae CWL029] gi|15836149|ref|NP_300673.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Chlamydophila pneumoniae J138] gi|16752423|ref|NP_444682.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Chlamydophila pneumoniae AR39] gi|33241974|ref|NP_876915.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Chlamydophila pneumoniae TW-183] gi|7674055|sp|Q9Z7T7|MNMG_CHLPN RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|4376914|gb|AAD18756.1| FAD-dependent oxidoreductase [Chlamydophila pneumoniae CWL029] gi|7189065|gb|AAF38013.1| gidA protein [Chlamydophila pneumoniae AR39] gi|8978989|dbj|BAA98824.1| FAD-dependent oxidoreductase [Chlamydophila pneumoniae J138] gi|33236484|gb|AAP98572.1| GidA [Chlamydophila pneumoniae TW-183] Length = 611 Score = 518 bits (1335), Expect = e-145, Method: Compositional matrix adjust. Identities = 280/621 (45%), Positives = 379/621 (61%), Gaps = 26/621 (4%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAGCEAA +AK+G S ++T TI +SCNPA+GG+GKGH+VREIDA Sbjct: 7 AYDVIVVGAGHAGCEAAYCSAKMGVSVLMLTSNLDTIAKLSCNPAVGGIGKGHIVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G+M V D +GIQFR+LN KGPAVR PR Q D++LY + M+R + + L ++Q V Sbjct: 67 LGGIMAEVTDQSGIQFRILNQTKGPAVRAPRAQVDKQLYHIHMKRLLENTPGLHIMQATV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 ++ +IS + ++ M TVVL++GTF+RG+IHIG GR+GD S L Sbjct: 127 ESLLDKEGVISGVTTKEGWMFSGKTVVLSSGTFMRGLIHIGDRNFSGGRLGDPSSQGLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFAD------ERLIPFSFMTDKITNRQI 238 K F RLKTGTP RL +I + E+Q D R PF + Q+ Sbjct: 187 DLKKRGFPISRLKTGTPPRLLASSINFSCMEEQPGDLGVGFVHRTEPF-----QPPLPQL 241 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C IT T +T II N+ SA+Y G I+ GPRYCPSIEDKIV+F ++ H +FLEPE Sbjct: 242 SCFITHTMEKTKAIISANLHRSALYGGCIEGVGPRYCPSIEDKIVKFSDKERHHVFLEPE 301 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL+T +Y NG+ST++P ++Q+ IR++ GLE I RP YAIEYDYI+ + PTLE+K Sbjct: 302 GLHTQEIYANGLSTSMPFDVQYDMIRSVLGLENAIITRPAYAIEYDYIHGNVIHPTLESK 361 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I GLFL GQINGTTGYEEAAAQGL+AGIN+ K SR +SYIGVM+DDLT++ Sbjct: 362 LIEGLFLCGQINGTTGYEEAAAQGLIAGINAVNKVFNRPPFIPSRQESYIGVMLDDLTTQ 421 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 + EPYRMFT RAE+R+ LR DNA RL+ G +LG + E R + K Q Sbjct: 422 ILDEPYRMFTGRAEHRLLLRQDNACARLSHYGYELGLLSEERYELVKKQNQ--------- 472 Query: 479 KSLVLTSKNLSSTSISFKQDGKTRTAY-EFLSYPDFSIQNLFSICP-DARKFSSLVIERL 536 L + +F+Q G++ + + LS P+ S L P D R +++ L Sbjct: 473 ----LLEEEKVRLQKTFRQYGQSVVSLAKALSRPEVSYDMLREAFPNDIRDLGAVLNASL 528 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 ++E Y+ Y RQ I + ++ E LIP+D DY + ALS E +EKL+ P L AS Sbjct: 529 EMEIKYSGYIDRQKILIQSLEKAESLLIPEDLDYKQITALSLEAQEKLAKFTPRTLGSAS 588 Query: 597 KIEGMTPAALNLLLIYIKKNT 617 +I G+ A + +L+I +KK+ Sbjct: 589 RISGIASADIQVLMIALKKHA 609 >gi|32475791|ref|NP_868785.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rhodopirellula baltica SH 1] gi|32446334|emb|CAD76162.1| glucose inhibited division protein A (GIDA) [Rhodopirellula baltica SH 1] Length = 667 Score = 518 bits (1335), Expect = e-145, Method: Compositional matrix adjust. Identities = 284/623 (45%), Positives = 383/623 (61%), Gaps = 21/623 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+VIG GHAG EAAA AA+LGA TAL+T T+G MSCNPAIGG+ KG +VRE+DAL Sbjct: 26 YDVVVIGAGHAGTEAAAAAARLGAKTALLTTNLDTVGQMSCNPAIGGVAKGQIVREVDAL 85 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLMG DA GIQFR+LN +KGPA+ PR QAD++ Y+ ++ I +Q+NLD+ Q V Sbjct: 86 GGLMGEAIDATGIQFRMLNRRKGPAMHSPRAQADKKAYQNFIKYRIETQDNLDLRQETVE 145 Query: 126 GFNTE----------KNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMG 175 TE + + ++ +++ TV+LTTGTFL+ ++H GK + GR G Sbjct: 146 DLITEPIADGQDRLANQRVIGVRVRGDAVYHAPTVILTTGTFLQAIMHTGKSQSAGGRAG 205 Query: 176 DSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN 235 + + L + F R KTGTP RL+ +TI + E+Q D+ PFS++ D I++ Sbjct: 206 EGTTAGLSGALKGMGFTLDRFKTGTPPRLNARTIDYSGLEEQPGDDDPQPFSYLNDAISS 265 Query: 236 RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFL 295 Q+ C I TN H +I N+ + +YSG I S GPRYCPSIEDK+VRF +++ HQ+FL Sbjct: 266 PQMACHIAHTNERVHDLIRANLDRAPMYSGQIDSRGPRYCPSIEDKVVRFADKSSHQLFL 325 Query: 296 EPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTL 355 EPEG T VY NGIST+LP ++Q R IPGLEK I+R GYA+EYDY P +L+P L Sbjct: 326 EPEGRQTCEVYVNGISTSLPRDVQDAMFRCIPGLEKAAIMRYGYAVEYDYCPPTQLWPHL 385 Query: 356 ETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDL 415 E+K +SGLF AGQINGTTGYEEAA QGL+AG+N+AR + SR D+YIGV++DDL Sbjct: 386 ESKSVSGLFFAGQINGTTGYEEAAGQGLIAGLNAARTAASKTPWVPSRQDAYIGVLVDDL 445 Query: 416 TSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLR 475 + G EPYRMFTSRAEYR+ LR DNAD RLT +LG I R++RF + + E Sbjct: 446 VTSGTDEPYRMFTSRAEYRLLLRQDNADRRLTAQADELGLIDAARRERFHRKLAEIERGT 505 Query: 476 SLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIER 535 LL+ + G T +L P+ + + P+ E+ Sbjct: 506 ELLQQAKFQPET-----------GPTVRGDVYLRRPEVTWNVIAEQVPELAGIGREAAEQ 554 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 I+ YA Y RQ E + ++ IP FDY + L NE KEKL+ ++P NL QA Sbjct: 555 CSIDIKYAGYIDRQQAEVHKQSRHAEKSIPVSFDYDKIGPLRNEAKEKLTKVRPLNLGQA 614 Query: 596 SKIEGMTPAALNLLLIYIKKNTV 618 +I G+TPA L L+L +++ N++ Sbjct: 615 KRISGITPADLALVLAHLENNSL 637 >gi|325143206|gb|EGC65546.1| glucose-inhibited division protein A [Neisseria meningitidis 961-5945] gi|325197480|gb|ADY92936.1| glucose-inhibited division protein A [Neisseria meningitidis G2136] Length = 628 Score = 518 bits (1335), Expect = e-145, Method: Compositional matrix adjust. Identities = 284/621 (45%), Positives = 386/621 (62%), Gaps = 12/621 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 5 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY+ ++ + +QENLD+ Q Sbjct: 65 ALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKATIREMLENQENLDLFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + IS +V + VVLT GTFL G IHIG GR GD + SL Sbjct: 125 VEDVTLDGERISGVVTAMGVEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT----DKITNRQIE 239 + + GRLKTGTP R+DG+TI + + +Q D P M+ ++ Q+ Sbjct: 185 GRLRELNLPQGRLKTGTPPRIDGRTIDFSQLTEQPGD---TPVPVMSVRGSAEMHPHQVS 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEG Sbjct: 242 CWITHTNTQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 302 LTTHEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKT 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG N+ + D + R +Y+GV++DDL +KG Sbjct: 362 IEGLFFAGQINGTTGYEEAAAQGLLAGANAVQYVRGQDPLLLRREQAYLGVLVDDLITKG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 V EPYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + + LK Sbjct: 422 VNEPYRMFTSRAEYRLQLREDNADMRLTEDGYKIGLVGEAQWRMFNEKREAIEREIQRLK 481 Query: 480 SLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI--CPDARKFSSLVIE 534 + T + L+ + ++ + ++ L P+ L ++ + + S+ V+E Sbjct: 482 TTWYTPQKLAEDEQIRVFGQKLNREANLHDLLRRPNLDYTALMTLEGAMPSERLSAEVVE 541 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E + E +P DY + LS E+++KL+ KP + Q Sbjct: 542 QVEIQVKYQGYIDRQNEEIDSRRDIETLKLPDGIDYGKVKGLSAEVQQKLNQHKPETVGQ 601 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G+TPAA+ LL++++K+ Sbjct: 602 ASRISGVTPAAVALLMVHLKR 622 >gi|207080326|ref|NP_001128989.1| protein MTO1 homolog, mitochondrial precursor [Pongo abelii] gi|75041983|sp|Q5RB71|MTO1_PONAB RecName: Full=Protein MTO1 homolog, mitochondrial; Flags: Precursor gi|55728493|emb|CAH90989.1| hypothetical protein [Pongo abelii] Length = 692 Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust. Identities = 285/630 (45%), Positives = 407/630 (64%), Gaps = 25/630 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA+ G+ T L+TH+ TIG MSCNP+ GG+GKGHL+RE+DAL Sbjct: 37 FDVIVIGGGHAGTEAATAAARCGSRTLLLTHRVDTIGQMSCNPSFGGIGKGHLMREVDAL 96 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGL R+ D +G+ ++VLN +KGPAV G R Q DR+LY+ MQ+EIL+ L V +G V Sbjct: 97 DGLCSRICDQSGVHYKVLNRRKGPAVWGLRAQIDRKLYKQNMQKEILNTPLLTVQEGAVE 156 Query: 126 GF--------NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 +T K +S +V+ D S + +V+LTTGTFLRG+I IG PAGR+GD Sbjct: 157 DLILTEPEPEHTGKCRVSGVVLVDGSTVYAESVILTTGTFLRGIIVIGLETHPAGRLGDQ 216 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR- 236 PS L + K F GRLKTGTP R+ ++I + K D IPFSF + + + Sbjct: 217 PSIGLAQTLEKLGFVVGRLKTGTPPRIAKESINFSILNKHTPDNPSIPFSFTNETVWIKP 276 Query: 237 --QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 Q+ C +T TN I+++N+ ++ + GPRYCPSIE K++RF R HQ++ Sbjct: 277 EDQLPCYLTHTNPRVDEIVLKNLHLNSHVKETTR--GPRYCPSIESKVLRFPNRL-HQVW 333 Query: 295 LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT 354 LEPEG+++D++YP G+S LP E+Q + I I GLEK +I+PGY ++YDY++P+++ P+ Sbjct: 334 LEPEGMDSDLIYPQGLSMTLPAELQEKMITCIRGLEKAKVIQPGYGVQYDYLDPRQITPS 393 Query: 355 LETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDD 414 LET + LF AGQINGTTGYEEAAAQG++AGIN++ + ++ SRT+ YIGV+IDD Sbjct: 394 LETHLVQRLFFAGQINGTTGYEEAAAQGVIAGINASLRVSRKPPFVVSRTEGYIGVLIDD 453 Query: 415 LTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMK-LGCIGERRQKRFAKYIQEYNF 473 LT+ G EPYRMFTSR E+R+SLRPDNAD+RLT G K GC+ ++R +R Sbjct: 454 LTTLGTSEPYRMFTSRVEFRLSLRPDNADSRLTLRGYKDAGCVSQQRYERACWMKSSLEE 513 Query: 474 LRSLLKSLVLTS----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA-RKF 528 S+LKS+ +S K + SIS + R A + L Y + + +L P+ +K+ Sbjct: 514 GISVLKSIEFSSSKWKKLIPEASISTSRSLPVR-ALDVLKYEEVDMDSLAKAVPEPLKKY 572 Query: 529 SSL--VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLP--ALSNELKEKL 584 + + ERL+IE++Y + Q+ E K ++ +E +PKD DY ++ +LS+E++EKL Sbjct: 573 TKCRELAERLKIEATYESVLFHQLQEIKGVQQDEALQLPKDLDYLTIRDVSLSHEVREKL 632 Query: 585 SILKPFNLLQASKIEGMTPAALNLLLIYIK 614 +P + AS+I G+TPAA+ LL ++K Sbjct: 633 HFSRPQTIGAASRIPGVTPAAIINLLRFVK 662 >gi|241243540|ref|XP_002402151.1| glucose inhibited division protein, putative [Ixodes scapularis] gi|215496274|gb|EEC05914.1| glucose inhibited division protein, putative [Ixodes scapularis] Length = 665 Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust. Identities = 279/633 (44%), Positives = 401/633 (63%), Gaps = 20/633 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGS-MSCNPAIGGLGKGHLVREIDA 64 YDVI++GGGHAG EAA+ +A++G +T L+TH+ TIG MSCNP+ GG+GKGHL+REIDA Sbjct: 39 YDVIIVGGGHAGTEAASASARMGCNTLLLTHRFDTIGEFMSCNPSFGGIGKGHLMREIDA 98 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G+ G++ D +GI +R+LN +KGPAV GPR Q DR LY+ +Q + NL ++ G V Sbjct: 99 LGGVCGKICDLSGISYRILNRRKGPAVWGPRAQIDRTLYKRHIQSYLKDHPNLTILCGSV 158 Query: 125 AGFNTE----KNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 E K I ++D S I +V+LTTGTFLRG I+IG PAGR+GD P+ Sbjct: 159 EDLVLEEGGHKKRCCGIRLEDGSEIYSHSVILTTGTFLRGQINIGLQTYPAGRLGDKPAI 218 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI---TNRQ 237 L + + +F GRLKTGTP RLDG+TI + + Q D+ PFS+ + Q Sbjct: 219 GLAQTLERLEFRLGRLKTGTPPRLDGRTIDYSNLKIQLGDDPPEPFSYSNSSVWIKAEDQ 278 Query: 238 IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 + +T T E ++MEN+ +I G RYCPSIE K++RF R+ HQ++LEP Sbjct: 279 VPMYLTYTTPEVDALVMENLHLDRHVKEEIT--GVRYCPSIESKVLRFKGRS-HQVWLEP 335 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EGL+T VVYPNGIS LP ++Q + +R +PG V++IRPGY +EYD+I+P+++ P+LET Sbjct: 336 EGLDTHVVYPNGISCTLPADVQLKLVRCLPGCRDVDMIRPGYGVEYDFIDPRQVKPSLET 395 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 K++ GLF AGQINGTTGYEEAAAQ + + S+ K + D +R + YIGV++DDLT+ Sbjct: 396 KEVPGLFFAGQINGTTGYEEAAAQ-VSSFCFSSSKVCRKDPFVVTRLEGYIGVLVDDLTT 454 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL 477 +G LEPYRMFTSRAE+R+SLRPDNAD RLT G ++GC+ + + + + + + Sbjct: 455 QGTLEPYRMFTSRAEFRLSLRPDNADLRLTERGREVGCVAAEQSRATCEVRRILDEAQHF 514 Query: 478 LKSLVLTSKNLSS-TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICP---DARKFSSLVI 533 L S V +S S + + + ++A E L PD +I+++ S+ P + + ++ Sbjct: 515 LGSQVQSSHKWSDLMGLPESTNPQCKSALEMLGNPDVTIEHITSLFPTELETVRSRPDLM 574 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPA--LSNELKEKLSILKPFN 591 +RL+IE+ YA +Q E E++ E +P D DY P+ LSNE++ KL KP Sbjct: 575 KRLKIEAMYANLVAQQEKEILELEETEMLQLPCDIDYED-PSLNLSNEIRGKLQAAKPST 633 Query: 592 LLQASKIEGMTPAALNLLLIYIKKNTVKLNEIV 624 + AS+I GMTP A+ L L+ + + KL+ + Sbjct: 634 VGAASRIPGMTPVAI-LRLLRLTRQKQKLSSVA 665 >gi|46111425|ref|XP_382770.1| hypothetical protein FG02594.1 [Gibberella zeae PH-1] Length = 668 Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust. Identities = 279/629 (44%), Positives = 394/629 (62%), Gaps = 15/629 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDV+VIGGGHAG EA A AA+ GA TALIT K +G+ SCNP+ GG+GKG ++REID Sbjct: 32 KPYDVVVIGGGHAGAEACAAAARAGARTALITPKLDNLGTCSCNPSFGGIGKGTIIREID 91 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDGL GR+ D +G+QF +LN +KG AV GPR Q DR+LY+ M+ E+ S NL ++ Sbjct: 92 ALDGLAGRIIDKSGVQFHILNRRKGAAVWGPRAQIDRDLYKKHMKAELTSYPNLSIVLDS 151 Query: 124 VAGF--------NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMG 175 V+ + N IS + ++ ++ + V++TTGTFL G IHIG PAGR+G Sbjct: 152 VSDIVLTPQDPTDGASNRISGVRLESGQILPTNKVIITTGTFLGGEIHIGLDAYPAGRLG 211 Query: 176 DSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT- 234 ++ + L S F GRLKTGTP R+DG +I ++ EKQ+ D+ PFS++ D + Sbjct: 212 EAATFGLSKSLRDAGFQLGRLKTGTPPRIDGASINYEVLEKQYGDDPPSPFSYLNDTVAV 271 Query: 235 NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 Q+ C +T TN TH ++ + + + ++ GPRYCPS+E KI+RF ++ H ++ Sbjct: 272 QEQLTCSVTYTNEMTHDVVRDILDKTIHIRETVR--GPRYCPSLESKIIRFADKTRHIVW 329 Query: 295 LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT 354 LEPEG ++ V+YPNG+S +P E Q Q +RTIPGLE +++PGY +EYDYI+P+ L T Sbjct: 330 LEPEGFDSPVIYPNGLSMTIPAEAQEQVLRTIPGLENSKMLQPGYGVEYDYIDPRGLKST 389 Query: 355 LETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDD 414 LETK ISGL+LAGQINGTTGYEEAA QG++AGIN+ R S L + +R+D YIG+M+DD Sbjct: 390 LETKAISGLYLAGQINGTTGYEEAAGQGVLAGINAGRSSQGLPGVSLTRSDGYIGIMVDD 449 Query: 415 LTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFL 474 L +KGV EPYRMFTSR+E+R++ R DNAD RLTP G + G I ++R + Q+ + L Sbjct: 450 LITKGVTEPYRMFTSRSEFRMAARADNADFRLTPKGHEWGVISDKRWSSYRDERQQMDDL 509 Query: 475 RSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPD----FSIQNLFSICPDARKFSS 530 L+S+ L+ K++ R + L ++ L S+ P +S+ Sbjct: 510 TKSLQSVSLSPNQWIEKGFHLKRNSTRRDGIDMLRLSSTTTRIELEQLASVMPSIMDYSA 569 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 V R+ IE+ YA Y E K +E+ IP D DY +P L+ KE L KP Sbjct: 570 NVRNRVAIEAFYAPYVKIAETERKRFTNDERVRIPIDLDYGEIPGLALSEKEALRAAKPE 629 Query: 591 NLLQASKIEGMTPAALNLLLIYIKKNTVK 619 NL QA ++EG+TP+ LL Y+++ V+ Sbjct: 630 NLAQARRVEGVTPSGSLRLLAYVRRQPVR 658 >gi|72383112|ref|YP_292467.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prochlorococcus marinus str. NATL2A] gi|123620660|sp|Q46IB4|MNMG_PROMT RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|72002962|gb|AAZ58764.1| Glucose-inhibited division protein A subfamily [Prochlorococcus marinus str. NATL2A] Length = 656 Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust. Identities = 281/639 (43%), Positives = 386/639 (60%), Gaps = 24/639 (3%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 N S+DVIV+GGGHAGCEAA +A+LG +TAL T I CNPA+GG K LV E+ Sbjct: 8 NESFDVIVVGGGHAGCEAALTSARLGLNTALFTLNLDRIAWQPCNPAVGGPAKSQLVHEV 67 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G++G++AD +Q RVLN +GPAVR R Q D+ Y M + + + NL + + Sbjct: 68 DALGGIIGKLADLTALQKRVLNASRGPAVRALRAQTDKRSYAHEMLKILQNTPNLKIREA 127 Query: 123 EVAGFNTEK----------------NIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGK 166 V G E I I S+ VVLTTGTFL G I IG Sbjct: 128 MVTGLEVEHYPNQIDQKTPEIQERIGFIKGIKTYFGSVFHAKAVVLTTGTFLGGRIWIGN 187 Query: 167 LKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFAD--ERLI 224 + AGR G+ S L K F T RLKTGTPAR+D +TI D ++Q +D ++ Sbjct: 188 QSMSAGRAGEQASEGLTEELKKLGFTTDRLKTGTPARVDRRTIDLDSLDEQLSDASDKFF 247 Query: 225 PFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVR 284 F ++ K + Q+ C ITRT +TH++I N+ + IY G I S GPRYCPSIEDKIVR Sbjct: 248 SFDPLSWK-SGEQMSCHITRTTKQTHQLIKNNLHLTPIYGGFIDSKGPRYCPSIEDKIVR 306 Query: 285 FGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYD 344 F +++ HQIFLEPEG +T +Y G ST LPE +Q + +RT+PGL+ ++RP YA+EYD Sbjct: 307 FADKDSHQIFLEPEGRDTPEMYVQGFSTGLPENLQLELLRTLPGLQNCVMLRPAYAVEYD 366 Query: 345 YINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 YI +L TLETK+ISGL+ AGQ+NGTTGYEEAAAQGLVAG+N+AR N + I F R Sbjct: 367 YIPATQLEATLETKRISGLYSAGQLNGTTGYEEAAAQGLVAGLNAARLVNNKEGIIFERE 426 Query: 405 DSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF 464 SYIG MIDDL +K + EPYR+ TSR+EYR+ LR DNAD RLTP+G +LG I ERR K F Sbjct: 427 SSYIGTMIDDLVTKDLKEPYRVLTSRSEYRLILRGDNADRRLTPLGYQLGLIDERRWKIF 486 Query: 465 AKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGK----TRTAYEFLSYPDFSIQNLFS 520 Q N + L+ + + S+ I + G + T FL + ++L + Sbjct: 487 NAKQQLINQEKERLEKERIKESDKSAKEI-YSSTGTPIKGSLTLANFLRRTNIHYKDLIT 545 Query: 521 ICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNEL 580 + V E ++I+ Y+ Y RQ + ++K + K+L+PK+ +Y+++ LS E Sbjct: 546 FNLTTQSIPLDVEEGVEIDIKYSGYLERQKAQINQLKQQSKKLLPKNLNYNNIETLSKEA 605 Query: 581 KEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 +EKL+I +P +L A+++ G++ A L LL+++K +K Sbjct: 606 REKLTISQPKSLGHAAQLPGVSKADLTALLVWLKIEKMK 644 >gi|300871371|ref|YP_003786244.1| tRNA-uridine 5-carboxymethylaminomethyl modification protein GidA [Brachyspira pilosicoli 95/1000] gi|300689072|gb|ADK31743.1| tRNA-uridine 5-carboxymethylaminomethyl modification enzyme, GidA [Brachyspira pilosicoli 95/1000] Length = 614 Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust. Identities = 276/617 (44%), Positives = 389/617 (63%), Gaps = 7/617 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +N YDVIV+G GHAG EAA +A+LG T +I+ TIG MSCNP+IGG+ KG +V+E Sbjct: 1 MNNKYDVIVVGAGHAGIEAALSSARLGMKTLIISINLDTIGQMSCNPSIGGVAKGTIVKE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G MG + D +QFR+LN KG AV PR QAD+ Y+ + + +++NL + Q Sbjct: 61 IDALGGEMGILIDKTMMQFRMLNRSKGKAVWAPRAQADKYAYKEEATKTLYAEDNLTLHQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E N++ + + C V+LTTGTFL G+IHIGK + AGR+G+ P+ Sbjct: 121 DIVTEVVVENNVVKGLKTERGIEYECQAVILTTGTFLNGLIHIGKYQKQAGRIGELPAIG 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L ++ K + GRLKTGTPAR+D +I +D E Q D+ + PFSF+ DKI Q C Sbjct: 181 LSDNLRKLGLEVGRLKTGTPARVDYYSINFDILEMQKGDDEITPFSFLDDKIDIVQEPCY 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT T+ H+II +NI S +YSG I GPRYCPSIEDK+VRF ++ HQ+ LE E Sbjct: 241 ITYTDENIHKIIQDNIHLSPMYSGVITGIGPRYCPSIEDKVVRFADKPRHQLHLERESYR 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ VY NG S++LPE++Q + IR++ GLE+V I++P YA+EYDY+NP EL PTLETKKI Sbjct: 301 TNEVYINGFSSSLPEDVQIKMIRSLKGLEEVKILKPAYAVEYDYVNPIELKPTLETKKIE 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLFLAGQINGT+GYEEAA QG++AGIN++ K K + R+D YIGV+IDDLT+KG Sbjct: 361 GLFLAGQINGTSGYEEAACQGIMAGINASLKIKKEEPFILKRSDGYIGVLIDDLTTKGTK 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EP+RMFTS+AE+R+ LR DNAD RLT + +G + R ++ Q+ L L Sbjct: 421 EPHRMFTSQAEHRMLLRQDNADERLTELSYNIGLASKERLEKVRDKKQKTQILVEYLNKR 480 Query: 482 VLTSKNLSSTSISFKQDGK---TRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 LT K + + F ++ K T + + P+ SI + + ++ V+E +I Sbjct: 481 TLTQK--ETEELGFTKEAKEYRTMSLSSIIKRPECSIDMVKHLIDG--DYNKNVLENAEI 536 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 Y Y R + E ++I+ EK IP+DFDYS+L ++ + KL KP+N+ QA ++ Sbjct: 537 AIKYEGYIARYLNEIRDIEKYEKMRIPEDFDYSTLKSVKIDAINKLKQYKPYNIAQALRV 596 Query: 599 EGMTPAALNLLLIYIKK 615 + + + +L++ + K Sbjct: 597 PEIDMSVVQVLILTLTK 613 >gi|284050122|ref|ZP_06380332.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Arthrospira platensis str. Paraca] gi|291570408|dbj|BAI92680.1| glucose inhibited division protein A [Arthrospira platensis NIES-39] Length = 637 Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust. Identities = 275/619 (44%), Positives = 376/619 (60%), Gaps = 15/619 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D+IV+GGGH+GCEAA AA+LG T L+T IG CNPA+G K L E+DAL Sbjct: 13 FDIIVVGGGHSGCEAALAAARLGCRTLLLTLNLDKIGWQPCNPAVGAPAKSQLTHEVDAL 72 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G +G++AD +Q R+LN +GPAV R Q D+ Y M++ + +QENL V +G V Sbjct: 73 GGEIGKMADRTYLQKRLLNNSRGPAVWALRAQTDKREYAAVMRQIVENQENLSVREGMVT 132 Query: 126 ----GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G N E I + C V+LTTGTFL G+I +G +PAGR G+ + Sbjct: 133 DLVLGLNDE---IIGVETYFGVAFACQAVILTTGTFLGGIIWVGNKSMPAGRAGEFAAVG 189 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIEC 240 L ++ + F+TGRLKTGTPAR+D +++ + E Q DER+ FSF R Q+ C Sbjct: 190 LTDTLNRLGFETGRLKTGTPARVDKRSVDYSNLEPQPGDERVRWFSFDPQVWVEREQMNC 249 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +TRT ETHR+I EN+ S +Y G + + GPRYCPSIEDKIVRF ++ HQIF+EPEG Sbjct: 250 YLTRTTAETHRLIRENLHLSPVYGGWVDAKGPRYCPSIEDKIVRFADKESHQIFIEPEGR 309 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + +Y G ST LPE++Q + +R++PGLE ++RP YA+EYDY+ + +PTL TKKI Sbjct: 310 HIPELYIQGFSTGLPEKLQLEMLRSLPGLENCVMLRPAYAVEYDYLPATQCYPTLMTKKI 369 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQINGTTGYEEAAAQG+VAGIN+ + D I F R SYIG +IDDL +K + Sbjct: 370 EGLFCAGQINGTTGYEEAAAQGIVAGINAVKLVRGEDMIVFPREQSYIGTLIDDLCTKDL 429 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRM TSR+EYR+ LR DNAD RLTP+G ++G I +RR + F + ++ N + + Sbjct: 430 REPYRMLTSRSEYRLLLRSDNADRRLTPLGREIGLIDDRRWQLFQQ--KQANIIAEKQRL 487 Query: 481 LVLTSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIER 535 K I+ D + + + E L P F NL + S E Sbjct: 488 DQTRVKERDEIGIAIASDTQQKIKGSISLAELLRRPGFHYGNLEHYNLGNSQLSLEEKEG 547 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 +IE Y+ Y RQ + +I R +P+D DY ++ LS E +EKL+ +KP + QA Sbjct: 548 AEIEIKYSGYMERQQNQIDQISRHANRQLPQDLDYLTIETLSMESREKLNRIKPLTIGQA 607 Query: 596 SKIEGMTPAALNLLLIYIK 614 S+I G+ PA +N LLIY++ Sbjct: 608 SRIGGVNPADINALLIYLE 626 >gi|195346742|ref|XP_002039916.1| GM15919 [Drosophila sechellia] gi|194135265|gb|EDW56781.1| GM15919 [Drosophila sechellia] Length = 661 Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust. Identities = 282/636 (44%), Positives = 415/636 (65%), Gaps = 31/636 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+VIGGGHAG EA+A AA++G+ T L+THK TIG MSCNP+ GG+GKGHL+RE+DAL Sbjct: 31 YDVVVIGGGHAGTEASAAAARMGSRTLLLTHKLETIGEMSCNPSFGGIGKGHLMREVDAL 90 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DG+ R D +G+ ++VLN ++GPAV GPR Q DR+LY+ A+Q+E+ S NL++ V Sbjct: 91 DGVCARCCDVSGVHYKVLNRRRGPAVWGPRAQIDRQLYKKAVQQELHSTPNLEIRAAAVD 150 Query: 126 G------FNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 +T+ S +++ + ++R +VVLTTGTFLR I+IG PAGR+GD+P+ Sbjct: 151 NLLIEDELDTQARRCSGVLLANGEVVRSRSVVLTTGTFLRAHINIGLEVRPAGRIGDAPA 210 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI---TNR 236 +L + + F GRLKTGTP R+ ++ + + ++ D+ +PFSF+ + Sbjct: 211 EALGEAIDRLGFRMGRLKTGTPPRIAKDSVDFSQLQRHDGDDPPMPFSFLNKDVWLPAKD 270 Query: 237 QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLE 296 Q+ C +T T + I+ +N+ + + +I GPRYCPSIE KI+RFG + HQ++LE Sbjct: 271 QLPCYLTYTTPKVSDIVRDNLHVNRHVTEEIT--GPRYCPSIESKILRFGAKV-HQVWLE 327 Query: 297 PEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLE 356 PEGL++++VYP GIS LP + Q + + I GLEK +++PGY +EYD+I+P+EL+PTLE Sbjct: 328 PEGLDSNLVYPQGISCTLPHDQQVELVHAIQGLEKAVVVQPGYGVEYDFIDPRELYPTLE 387 Query: 357 TKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDC--ICFSRTDSYIGVMIDD 414 TK++ GLF AGQINGTTGYEEAAAQG++AG N+A K+ +D + SRT+ YIGV+IDD Sbjct: 388 TKRVPGLFFAGQINGTTGYEEAAAQGIIAGANAAGKTRHIDGRQLTISRTEGYIGVLIDD 447 Query: 415 LTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF----AKYIQE 470 LTS G EPYRMFTSRAE+R+SLRPDNAD RLT G + G + R + F A+ Sbjct: 448 LTSLGTNEPYRMFTSRAEFRLSLRPDNADMRLTQKGYEFGLVSSARYQHFQQTEARLQSA 507 Query: 471 YNFLRSLLKSLVLTSK--NLSSTSISFKQDGKTRTAYEFLSYP--DFSIQNLFSICPDAR 526 + LR L K + NL S + +TA++ L P + +I+ L + P+ Sbjct: 508 IDSLRRLRKHTHYWRQALNLPKAKASVE-----KTAFDMLGIPADNITIEKLIQLHPNEL 562 Query: 527 KF---SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDY-SSLPALSNELKE 582 + + ERL+IE+ Y+ + Q + ++++ EE+ IP D DY S +LSNE ++ Sbjct: 563 SWLKGDRNLAERLKIEALYSFFVDEQQRDVEDVRREERLSIPADIDYFSKSLSLSNEERQ 622 Query: 583 KLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTV 618 KL++++P + AS+I+G+TP+ + +L Y+KK V Sbjct: 623 KLTLIQPQTIAAASRIQGVTPSTIVRILKYVKKAEV 658 >gi|295668953|ref|XP_002795025.1| mitochondrial translation optimization protein [Paracoccidioides brasiliensis Pb01] gi|226285718|gb|EEH41284.1| mitochondrial translation optimization protein [Paracoccidioides brasiliensis Pb01] Length = 695 Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust. Identities = 281/630 (44%), Positives = 388/630 (61%), Gaps = 21/630 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+VIGGGHAG EA A AA+LGA TAL+T S IG SCNP+IGG+GKG ++REIDAL Sbjct: 38 YDVVVIGGGHAGSEACAAAARLGARTALVTPSRSNIGVCSCNPSIGGIGKGTMIREIDAL 97 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGL G VAD AGIQFR+LN KG AV GPR Q DR LYR M ++ + L +++G+V Sbjct: 98 DGLAGDVADKAGIQFRILNRSKGEAVWGPRAQIDRILYRKHMLEKLSTTPGLSIVEGKVG 157 Query: 126 GFNTEKNIISS--------IVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 + +++ + ++ +I VV+TTGTFL G IHIG P+GRMG++ Sbjct: 158 DIILSREDLAAGSQGKIIGVRLESGEVIPTGRVVITTGTFLGGEIHIGLDVFPSGRMGEA 217 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--- 234 + L S + F GRLKTGTP R++ K+I + E D +PFS++ ++ Sbjct: 218 ATFGLSRSLREAGFQLGRLKTGTPPRIEKKSIDFSNLEVHPGDSPPVPFSYLNKRVAVND 277 Query: 235 NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 Q+ C T TN +H+I+ +N+ S +K GPRYCPS+E KI+RF ++ H ++ Sbjct: 278 EDQLPCWSTYTNETSHQIVRDNLDKSVHIRETVK--GPRYCPSLESKIIRFKDKKRHIVW 335 Query: 295 LEPEGLN-TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFP 353 LEPEG +V+YPNGIS +P + Q +RTIPGLE +++ GY +EYDY++P+ L P Sbjct: 336 LEPEGFAPNEVIYPNGISMTIPSDAQLALLRTIPGLENAQMLQAGYGVEYDYVDPRSLRP 395 Query: 354 TLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMID 413 TLETK ISGL+LAGQINGTTGYEEAA QG++AGIN+ S SR+D +IG+M+D Sbjct: 396 TLETKLISGLYLAGQINGTTGYEEAAGQGILAGINAGLASQSKPPFTLSRSDGFIGIMVD 455 Query: 414 DLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNF 473 DL +KGV EPYRMFT+R+EYRIS R DNAD RLT G ++G +G+RR F++ + Sbjct: 456 DLITKGVSEPYRMFTARSEYRISTRSDNADLRLTARGREIGAVGDRRWNHFSQVEAQITE 515 Query: 474 LRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDAR------- 526 LR+LL++ S S D R+A++ L D SI ++ Sbjct: 516 LRTLLENTKFPSTLWSRKGFGVHGDNNLRSAFDLLRLNDISIDDIIPHIESGSGRTYTPL 575 Query: 527 KFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSI 586 F+S + R+ IE YA Y +A+ + +E L+P D DY + LS E + L Sbjct: 576 SFTSEIKHRVAIEGRYAPYIKIHADKARSFEKDEALLLPPDIDYGQVVGLSYEERAALER 635 Query: 587 LKPFNLLQASKIEGMTPAALNLLLIYIKKN 616 ++P N+ A +IEGMTP A LL++++KN Sbjct: 636 VRPENIGMARRIEGMTPVAALRLLVHVRKN 665 >gi|89889742|ref|ZP_01201253.1| glucose-inhibited division protein, GIDA (NAD/FAD-utilizing enzyme) [Flavobacteria bacterium BBFL7] gi|89518015|gb|EAS20671.1| glucose-inhibited division protein, GIDA (NAD/FAD-utilizing enzyme) [Flavobacteria bacterium BBFL7] Length = 623 Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust. Identities = 273/624 (43%), Positives = 391/624 (62%), Gaps = 10/624 (1%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M +R YDVIV+G GHAG EAAAVAA +G+ST L+T TIG MSCNPA+GG+ KG +VR Sbjct: 1 MFDREYDVIVVGAGHAGSEAAAVAANMGSSTLLVTMNLETIGQMSCNPAMGGIAKGQIVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL GL G V+D + IQF++LN KGPA+ PRTQ DR + + ++ + LD Sbjct: 61 EIDALGGLSGIVSDKSAIQFKMLNQSKGPAMWSPRTQNDRMRFSEEWRMQLEAIPLLDFY 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q VAG E + + IR VVLT GTFL G+IHIG + GR G+ S Sbjct: 121 QEMVAGLIIEDEKVVGVRTSLGIEIRSKAVVLTNGTFLNGLIHIGDKQFGGGRAGERAST 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSF--MTDKITNRQI 238 + + F++GR+KTGTP R+DG+++ + K E Q D FS+ +T + N Q Sbjct: 181 GITGQLVDLGFESGRMKTGTPPRVDGRSLDYSKMEPQPGDAVTSKFSYSNLTSSLKN-QR 239 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 +C +T T+ E H ++ E S +++G IKS GPRYCPSIEDKI RF +++ HQ+F+EPE Sbjct: 240 DCHMTYTSPEVHNLLREGFDRSPMFNGRIKSLGPRYCPSIEDKIDRFADKDRHQLFVEPE 299 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 G NT VY NG ST+LPE++Q + +R++ G EKV RPGYAIEYDY P +L TLETK Sbjct: 300 GWNTCEVYVNGFSTSLPEDVQFKALRSVVGFEKVKFFRPGYAIEYDYFPPTQLKHTLETK 359 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I GL+ AGQINGTTGYEEAA+QGL+AGIN+ RK + + R ++YIGV++DDL +K Sbjct: 360 LIDGLYFAGQINGTTGYEEAASQGLMAGINAVRKIREEEPFILKRDEAYIGVLVDDLITK 419 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYRMFTSRAEYR LR DNAD RLTP + LG + + KR + E + L Sbjct: 420 GTEEPYRMFTSRAEYRTLLRQDNADLRLTPRAVDLGIVTDESLKRVERKATESEKMVQFL 479 Query: 479 KSLVLTSKNLSSTSIS--FKQDGKTRTAYEFLSYPDFSIQNLFSICP-----DARKFSSL 531 + K +++ ++ KQ + ++ S P +++++ +I Sbjct: 480 RDTSYDFKEMNNLLVAKGSKQVTQNDKLFKVFSRPQVNLEDIKTISQVKGYLKENDLDDD 539 Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 ++E++++ YA Y ++ A ++ E IP D+D+ S+ +LS E +EKL+ ++P Sbjct: 540 ILEQVEVHVKYAGYIAKEKDNADKLHRLENVKIPSDYDFKSIKSLSYEAREKLTTIQPAT 599 Query: 592 LLQASKIEGMTPAALNLLLIYIKK 615 + QAS+I G++P+ +++LL+++ + Sbjct: 600 VSQASRISGVSPSDISVLLVHMGR 623 >gi|195382695|ref|XP_002050065.1| GJ21932 [Drosophila virilis] gi|194144862|gb|EDW61258.1| GJ21932 [Drosophila virilis] Length = 659 Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust. Identities = 278/635 (43%), Positives = 412/635 (64%), Gaps = 28/635 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+VIGGGHAG EA A AA++GA T L+THK TIG MSCNP+ GG+GKGHL+RE+DAL Sbjct: 27 YDVVVIGGGHAGTEACAAAARMGARTLLLTHKLDTIGEMSCNPSFGGIGKGHLMREVDAL 86 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DG+ R D +G+ ++VLN ++GPAV GPR Q DR+LY+ A+Q+E+ + NL + V Sbjct: 87 DGVCARCCDVSGVHYKVLNKRRGPAVWGPRAQIDRQLYKRAVQQELFNTPNLQIRAAAVD 146 Query: 126 GFNTEKNIISS-------IVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSP 178 + + ++ +++ D ++ TVVLTTGTFLR I+IG AGRMGD P Sbjct: 147 NLQIDADETANGGARCNGVLLSDGELVHSRTVVLTTGTFLRAHINIGLEVKEAGRMGDKP 206 Query: 179 SNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI---TN 235 + +L + + F GRLKTGTP R+ ++ + K EK AD+ PFSF+ ++ + Sbjct: 207 AKALGEALNRLGFRMGRLKTGTPPRIAKNSVDFSKLEKHEADDPPTPFSFLNHEVWLSAS 266 Query: 236 RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFL 295 Q+ C +T T + I+ +N+ + + ++ GPRYCPSIE K++RFG R HQ++L Sbjct: 267 EQLPCYLTYTTPRVNEIVRDNLHVNRHVTEEVT--GPRYCPSIESKVLRFGARV-HQVWL 323 Query: 296 EPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTL 355 EPEG ++ + YP GIS LP Q + + I GLE+ +++PGY +EYD+I+P+EL+PTL Sbjct: 324 EPEGFDSPLCYPQGISCTLPHAQQVELVHAIKGLEQAEVVQPGYGVEYDFIDPRELYPTL 383 Query: 356 ETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDC--ICFSRTDSYIGVMID 413 ETK++SGLF AGQ+NGTTGYEEAAAQG++AG N+A K+ D + SRT+ YIGV+ID Sbjct: 384 ETKRVSGLFFAGQLNGTTGYEEAAAQGIIAGANAAGKTLHQDGRQLHISRTEGYIGVLID 443 Query: 414 DLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNF 473 DLTS G EPYRMFTSRAE+R+SLRPDNAD RLT G + G + E+R + F Q + Sbjct: 444 DLTSLGTNEPYRMFTSRAEFRLSLRPDNADMRLTEKGYQFGLVSEQRYRHFQ---QTEHK 500 Query: 474 LRSLLKSL--VLTSKNLSSTSISFKQDGKT--RTAYEFLSYP--DFSIQNLFSICPDARK 527 L++ +++L + N ++ Q + ++A++ L+ P + S+ L +CP Sbjct: 501 LKTGIEALRGLQKHSNFWRQALGLPQAKVSIQKSAFDMLAVPADNISVNQLIDLCPSELS 560 Query: 528 F---SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDY-SSLPALSNELKEK 583 + + + RL+IE+ Y+ + Q + ++++ EE IP D DY S +LSNE ++K Sbjct: 561 WLRDDNDLATRLKIEALYSFFVDEQQRDVEDVRREESLCIPGDIDYFSKSLSLSNEERQK 620 Query: 584 LSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTV 618 L++++P + AS+I+G+TP+ + +L Y+KK V Sbjct: 621 LTLIQPQTIAAASRIQGVTPSTILRILKYVKKADV 655 >gi|289436061|ref|YP_003465933.1| glucose inhibited division protein A [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289172305|emb|CBH28851.1| glucose inhibited division protein A [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 629 Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust. Identities = 268/619 (43%), Positives = 379/619 (61%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+G GHAG EA + ++GA T ++T + M CNP++GG KG +VREIDA Sbjct: 8 TFDVIVVGAGHAGVEAGLASGRMGAKTLMLTINLDMVAFMPCNPSVGGPAKGVVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ M+ I +EN+ + QG V Sbjct: 68 LGGEMGRNTDKTYIQMRMLNTGKGPAVRALRAQADKWDYQHEMKHTIEKEENITLRQGLV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ ++ TVV+TTGTF RG I +G+L+ +G PS L Sbjct: 128 DRLVIENGVCKGVITNSGAIYYAETVVITTGTFSRGEIIVGELRYSSGPNNQQPSVKLSE 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F+ R KTGTP R+ TI + KTE+Q DE FSF T ++ Q+ C +T Sbjct: 188 HLEELGFELRRFKTGTPPRVKSSTIDYSKTEEQPGDEHARAFSFDTVEMIMDQLPCWLTY 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +++ K G RYCPSIEDKIVRF ++ HQIFLEPEG NT+ Sbjct: 248 TNETTHEIIQANLHRSPMFTATKKGTGARYCPSIEDKIVRFSDKPRHQIFLEPEGRNTEE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPEE+Q + +RTIPGLE V ++R GYAIEYD + P +L+P+LETK + GLF Sbjct: 308 VYVQGLSTSLPEEVQREMLRTIPGLENVEMMRVGYAIEYDAVMPDQLWPSLETKLVEGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+ARK K + + R +YIGV+IDDL +KG EPY Sbjct: 368 TAGQINGTSGYEEAAGQGLMAGINAARKVFKKEPVILGRDQAYIGVLIDDLVTKGTEEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF-----AKYIQEYNFLRSLLK 479 R+ TSRAEYR+ LR DNAD RLT IG ++G I + R +RF A ++ ++ +K Sbjct: 428 RLLTSRAEYRLLLRHDNADLRLTEIGYEIGLISDERYERFLAKQSAIEAEKTRLQKTRIK 487 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 L +DG A + L P+ + + I + V E+++I+ Sbjct: 488 PTAEVQAMLKEIGSGELKDGI--LAADLLRRPEITYNKIAEIVSRETSVTDDVAEQVEIQ 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + ++ +++K E + IP++ DY ++ L+ E EKL ++P ++ QAS+I Sbjct: 546 VKYEGYIEKSKLQVEKMKRMEDKKIPENIDYDAISGLATEALEKLKKIEPLSIAQASRIS 605 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 606 GVNPADISILLVYIEQGKI 624 >gi|330444143|ref|YP_004377129.1| glucose-inhibited division protein A [Chlamydophila pecorum E58] gi|328807253|gb|AEB41426.1| glucose-inhibited division protein A [Chlamydophila pecorum E58] Length = 612 Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust. Identities = 281/618 (45%), Positives = 376/618 (60%), Gaps = 18/618 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAGCEAA AAK+GA ++T TI +SCNPA+GG+GKGH+VREIDA Sbjct: 7 NYDVIVVGAGHAGCEAAYCAAKIGALVLMLTSNLDTIAKLSCNPAVGGIGKGHIVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G+M V D GIQFR+LN KGPAVR PR Q D++LY + M+R + ENL ++QG V Sbjct: 67 LGGIMAEVTDQTGIQFRILNQTKGPAVRAPRAQVDKQLYHIHMKRLLEKTENLHIMQGTV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 +++ IS + ++ TVVL++GTF++G+IHIG+ GR+GD S L + Sbjct: 127 VSLLDKESCISGVTTKEGVTYLGKTVVLSSGTFMQGLIHIGERNFSGGRLGDPASLGLSD 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR--QIECGI 242 S + F GRLKTGTP RL +I + E+Q D + F + QI C I Sbjct: 187 SLRQRGFPLGRLKTGTPPRLLASSIDFSSMEEQPGDPG-VGFVHRNEPFVPPLPQISCYI 245 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T T T +II EN+ SA+Y G I+ GPRYCPSIEDKIV+F ++ H IFLEPEGL T Sbjct: 246 THTTSATKQIIEENLHCSALYGGRIEGVGPRYCPSIEDKIVKFADKERHHIFLEPEGLYT 305 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +Y NG+ST++P +IQ Q I ++ GLE I+RP YAIEYDYI+ + TLE+K I G Sbjct: 306 QEIYANGLSTSMPCDIQRQIIHSVRGLEAAVIMRPAYAIEYDYIHGNVIHATLESKIIEG 365 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LFL GQINGTTGYEEAAAQGL+AGIN+ K SR +SYIGVM+DDLT++ + E Sbjct: 366 LFLCGQINGTTGYEEAAAQGLIAGINAVNKVLNRSPFIPSRQESYIGVMLDDLTTQVLDE 425 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFT RAE+R+ LR DNA RL G LG + + R Y F ++ L Sbjct: 426 PYRMFTGRAEHRLLLRQDNAGTRLAQYGYDLGLLSKER----------YEFFQNQKVRLE 475 Query: 483 LTSKNLSSTSISFKQ-DGKTRTAYEFLSYPDFSIQNLFSICP-DARKFSSLVIERLQIES 540 + L T FK+ + + + L P+ S L I P D + ++ L++E Sbjct: 476 EEKQRLQKT---FKKYENSVVSLAKVLCRPEVSYDALQKIFPEDVQDLGPVLNASLEMEI 532 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 YA Y RQ + E+ IP+D DY ++ LS E KEK + P L AS+I G Sbjct: 533 KYAGYISRQQTLISNLAKSEETAIPEDLDYQAIVGLSLEAKEKFTKFTPRTLGSASRISG 592 Query: 601 MTPAALNLLLIYIKKNTV 618 ++ A + +L+I +KK+ + Sbjct: 593 ISSADIQVLMIALKKHAL 610 >gi|255527593|ref|ZP_05394457.1| glucose inhibited division protein A [Clostridium carboxidivorans P7] gi|296186791|ref|ZP_06855192.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium carboxidivorans P7] gi|255508726|gb|EET85102.1| glucose inhibited division protein A [Clostridium carboxidivorans P7] gi|296048505|gb|EFG87938.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium carboxidivorans P7] Length = 629 Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust. Identities = 268/618 (43%), Positives = 386/618 (62%), Gaps = 13/618 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+VIG GHAGCEA +A++G T + T ++G M CNP +GG KGHLVREIDAL Sbjct: 8 YDVVVIGAGHAGCEAGLASARMGCKTLMCTMNLDSVGFMPCNPNVGGTAKGHLVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG D IQ R+LN KGPAV R QAD++ Y M+ I ++NL + Q EV Sbjct: 68 GGEMGVNIDHTFIQSRMLNTSKGPAVHSLRAQADKKRYSERMKHVIEKEKNLYLRQIEVV 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E N + ++ ++ + + VVLTTGT+LRG I IG++ G G P+N L Sbjct: 128 DIKVENNKVCGVLTKNGAYFKTKAVVLTTGTYLRGKIIIGEVSYSGGPSGLFPANELSQK 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + + R KTGTPAR++ +++ K +Q DE+++PFSFM+D I Q+ C +T T Sbjct: 188 LIDLGIELRRFKTGTPARVNRRSVDLSKMIEQKGDEKIVPFSFMSDNIDRDQVSCYLTYT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 +T ++I +NI S +Y+G IKS GPRYCPSIEDK++RF ++ HQIF+EPEG NT+ + Sbjct: 248 TDDTLKVIRDNIHRSPLYNGTIKSVGPRYCPSIEDKVMRFPDKEKHQIFIEPEGENTEEL 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G S++LPEE+Q +TI GLE V I+R YAIEYD INP++L +LE K I GLF Sbjct: 308 YVGGASSSLPEEVQLAMYKTIEGLENVEILRTAYAIEYDCINPQQLKLSLEFKSIEGLFG 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ+NG++GYEEAAAQG++AGIN++ K + + + R+D+YIGV+IDDL +KG EPYR Sbjct: 368 AGQVNGSSGYEEAAAQGIIAGINASLKIKEKEPLILKRSDAYIGVLIDDLVTKGTEEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 M TSR+EYR+ LR DNAD RLT IG +G + E R +F K + + +K++ + Sbjct: 428 MMTSRSEYRLILRQDNADLRLTEIGHNIGLVNEERYNKFLKRKKTIEEEVARMKNIQVNP 487 Query: 486 K--------NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 K +L+ST + K+ + YE + P+ + + D + + E + Sbjct: 488 KKEVIEFLVSLNSTELK-----KSISLYELIKRPELDYFKVEPLDNDRIELPDDIKEEVN 542 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 S Y Y +Q+ + + K E + IP + DY+ + L E +KLS +KP N+ QAS+ Sbjct: 543 TISKYEGYINKQLEQVVQFKKFENKTIPDNIDYNDINGLRLEAVQKLSKVKPMNIGQASR 602 Query: 598 IEGMTPAALNLLLIYIKK 615 I G++PA +++LLIY+++ Sbjct: 603 ISGVSPADISVLLIYLER 620 >gi|240129081|ref|ZP_04741742.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria gonorrhoeae SK-93-1035] Length = 642 Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust. Identities = 284/622 (45%), Positives = 388/622 (62%), Gaps = 14/622 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 19 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 78 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R+QADR LY+ +++ + +QENLD+ Q Sbjct: 79 ALGGAMALATDKSGIQFRRLNASKGAAVRATRSQADRILYKASIREMLENQENLDLFQQA 138 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E IS ++ + + VVLT GTFL G IHIG GR GD + SL Sbjct: 139 VEDVTLEGERISGVITAMGAEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 198 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT----DKITNRQIE 239 + GRLKTGTP R+DG+TI + + +Q D P M+ ++ RQ+ Sbjct: 199 GRLRELKLPQGRLKTGTPPRIDGRTIDFSQLTEQPGD---TPVPVMSVRGNAEMHPRQVS 255 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEG Sbjct: 256 CWITHTNTQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEG 315 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 316 LTTHEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKT 375 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG N+ + D + R +Y+GV++DDL +KG Sbjct: 376 IEGLFFAGQINGTTGYEEAAAQGLLAGANAVQYVRGQDPLLLRREQAYLGVLVDDLITKG 435 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 + EPYRMFTSRAEYR+ LR DNAD RLT G K+G +G+ + + F + + LK Sbjct: 436 LNEPYRMFTSRAEYRLQLREDNADMRLTEDGYKIGLVGKAQWRMFNEKREAVEREIQRLK 495 Query: 480 SLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI---CPDARKFSSLVI 533 + + L+ + ++ + ++ L P+ L ++ P R S+ V+ Sbjct: 496 TTWYAPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGAIPSER-LSAEVV 554 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I+ Y Y RQ E + E +P DY + LS E+++KL+ KP + Sbjct: 555 EQVEIQVKYQGYIDRQNEEIDSRRDIETLKLPDGIDYGRVKGLSAEVQQKLNQHKPETVG 614 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I G+TPAA+ LL++++K+ Sbjct: 615 QASRISGVTPAAVALLMVHLKR 636 >gi|299136307|ref|ZP_07029491.1| glucose inhibited division protein A [Acidobacterium sp. MP5ACTX8] gi|298602431|gb|EFI58585.1| glucose inhibited division protein A [Acidobacterium sp. MP5ACTX8] Length = 697 Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust. Identities = 296/683 (43%), Positives = 389/683 (56%), Gaps = 76/683 (11%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +DV+++G GHAGCEAA AA++G TAL T I MSCNPAIGG+ KGHLVRE Sbjct: 3 FSEQFDVLIVGAGHAGCEAAVAAARMGLRTALFTLNLDLIAQMSCNPAIGGVAKGHLVRE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DAL G+MG VADA GIQFR+LN +GPAV PR Q D+ LYR+ M+ ++ S NL + Q Sbjct: 63 VDALGGIMGEVADACGIQFRLLNTSRGPAVWSPRAQCDKALYRVKMREKLESIPNLFIKQ 122 Query: 122 GEVAGFNTE-----------------------------------KNIISSIVMQDNSMIR 146 EV E ++ I+ + ++D I Sbjct: 123 AEVIDLVIESESASQQVSEPALKGTGLSPSVQATPVVGALAPEGRHRITGVKLRDGRTIA 182 Query: 147 CSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDG 206 +V++TTGTFL G+IH G+ + AGR G+ S L S K RLKTGTP RLDG Sbjct: 183 ARSVIVTTGTFLNGLIHCGEQQYTAGRSGEPASVLLGESLKKLGLRETRLKTGTPPRLDG 242 Query: 207 KTIIWDKTEKQFADERLIPFSFMTDKITN--------RQIECGITRTNLETHRIIMENIK 258 +TI W K E+Q D PFSF + RQI C I T ET ++I +N+ Sbjct: 243 RTIDWGKFEEQPGDTDPTPFSFRSAPTDGEPTWTPPLRQISCHIATTTPETLQLIRDNVH 302 Query: 259 HSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEI 318 S +++G I+ GPRYCPSIEDKIVRF ++ HQ FLEPEGLNT VY NG+ST+LP E+ Sbjct: 303 RSPMFTGQIEGIGPRYCPSIEDKIVRFPDKTSHQFFLEPEGLNTHEVYINGMSTSLPMEV 362 Query: 319 QHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEA 378 Q + +IPGLE ++RPGYAIEYD I+P EL TL KK GL+LAGQINGT+GYEEA Sbjct: 363 QAAMVHSIPGLENAEMLRPGYAIEYDAIDPTELDRTLRVKKFEGLYLAGQINGTSGYEEA 422 Query: 379 AAQGLVAGINSA-RKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISL 437 A QGL+AGIN+A + RT++Y G++IDDL SKG EPYRMFTSRAE+R+ L Sbjct: 423 ACQGLMAGINAALHAKGTAETFTLDRTEAYTGILIDDLISKGTDEPYRMFTSRAEFRLHL 482 Query: 438 RPDNADNRLTPIGMKLGCIGERRQKRF-AKYIQEYNFLRSLLKSLVLTSKNLSSTSISFK 496 R DNAD RLTP G +LG I + F AK + F R LL++ LT +L + Sbjct: 483 RIDNADVRLTPHGRQLGLIDDTAWDNFEAKQARAAAFTR-LLETTRLTDGDLQALEALSS 541 Query: 497 QDGKTRTAY-------EFLSYPDFSIQNLF--------SICPDARKFSSLVI-------- 533 + Y + L P +I+ L +I A S+L Sbjct: 542 SEPSAAQTYTRGDLFSQLLKRPAITIEQLLPLLVTRMGAISEFAPWLSALTAANYPQTLP 601 Query: 534 -----ERLQIESS--YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSI 586 E +E+ +A Y +Q + ++ +E R IP FDY + LS E+ EKLS Sbjct: 602 AWVRNEMKTVETGIKFAGYLAQQQRSMERLRKDEARAIPDWFDYRACSGLSREMVEKLSR 661 Query: 587 LKPFNLLQASKIEGMTPAALNLL 609 ++P L QAS++ G+TPAA+ L+ Sbjct: 662 VRPSTLGQASRMSGVTPAAVTLI 684 >gi|225678539|gb|EEH16823.1| mitochondrial translation optimization protein [Paracoccidioides brasiliensis Pb03] Length = 695 Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust. Identities = 280/630 (44%), Positives = 390/630 (61%), Gaps = 21/630 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+VIGGGHAG EA A AA+LGA TAL+T S IG SCNP+IGG+GKG ++REIDAL Sbjct: 38 YDVVVIGGGHAGSEACAAAARLGARTALVTPSRSNIGVCSCNPSIGGIGKGTMIREIDAL 97 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGL G VAD AGIQFR+LN KG AV GPR Q DR LYR M ++ + L +++G+V Sbjct: 98 DGLAGDVADKAGIQFRILNRSKGEAVWGPRAQIDRILYRKHMLEKLSTTPGLSIVEGKVG 157 Query: 126 GFNTEKNIISS--------IVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 + +++ + ++ +I VV+TTGTFL G IHIG P+GRMG++ Sbjct: 158 DIILSREDLAAGSQGKIIGVRLESGEVIPTGRVVITTGTFLGGEIHIGLDVFPSGRMGEA 217 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--- 234 + L S + F GRLKTGTP R++ K+I + E D +PFS++ ++ Sbjct: 218 ATFGLSKSLREAGFQLGRLKTGTPPRIEKKSIDFSNLEVHPGDSPPVPFSYLNKRVAVND 277 Query: 235 NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 Q+ C T TN +H+I+ +N+ S +K GPRYCPS+E KI+RF ++ H ++ Sbjct: 278 EDQLPCWSTYTNEASHQIVRDNLDKSVHIRETVK--GPRYCPSLESKIIRFKDKKRHIVW 335 Query: 295 LEPEGLN-TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFP 353 LEPEG +V+YPNGIS +P + Q +RTIPGLE ++++ GY +EYDY++P+ L P Sbjct: 336 LEPEGFAPNEVIYPNGISMTIPSDAQLALLRTIPGLENAHMLQAGYGVEYDYVDPRSLRP 395 Query: 354 TLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMID 413 TLETK ISGL+LAGQINGTTGYEEAA QG++AGIN+ S SR+D +IG+M+D Sbjct: 396 TLETKLISGLYLAGQINGTTGYEEAAGQGILAGINAGLASQSKPPFILSRSDGFIGIMVD 455 Query: 414 DLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNF 473 DL +KGV EPYRMFT+R+EYRIS R DNAD RLT G ++G +G+RR F++ + Sbjct: 456 DLITKGVSEPYRMFTARSEYRISTRSDNADLRLTARGREIGAVGDRRWNHFSQVEAQITE 515 Query: 474 LRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDAR------- 526 LR+LL++ S S D R+A++ L D SI ++ + Sbjct: 516 LRTLLENTKFPSALWSRKGFGVHGDNNLRSAFDLLRLNDTSIDDIIPHIESSSGRTYTPL 575 Query: 527 KFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSI 586 F+S + R+ IE YA Y +A+ + +E L+P D DY + LS E + L Sbjct: 576 SFTSEIKHRVAIEGRYAPYIKIHADKARSFEKDESLLLPPDMDYGQVVGLSYEERAALER 635 Query: 587 LKPFNLLQASKIEGMTPAALNLLLIYIKKN 616 ++P N+ A +IEGMTP A LL+++++N Sbjct: 636 VRPENIGMARRIEGMTPVAALRLLVHVRRN 665 >gi|145631884|ref|ZP_01787641.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Haemophilus influenzae R3021] gi|144982487|gb|EDJ90050.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Haemophilus influenzae R3021] Length = 505 Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust. Identities = 260/484 (53%), Positives = 327/484 (67%), Gaps = 1/484 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIGGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DA Sbjct: 6 TYDVIVIGGGHAGTEAALAPARMGFKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 + GLM AD AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q E Sbjct: 66 MGGLMAHAADKAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIFQQEA 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E++ ++ + + R +VVLT GTFL G IHIG GR GD S +L + Sbjct: 126 TDILIEQDRVTGVSTKMGLTFRAKSVVLTAGTFLAGKIHIGLENYEGGRAGDPASVNLSH 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 RLKTGTP R+D +TI +D KQ DE L FSFM + +QI C IT Sbjct: 186 RLRDLGLRVDRLKTGTPPRIDARTINFDILAKQHGDEVLPVFSFMGSVDDHPQQIPCYIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL ++ Sbjct: 246 HTNEQTHEVIRNNLDRSPMYTGVIEGIGPRYCPSIEDKVMRFSDRNSHQIYLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNGIST+LP ++Q + ++ GLEK II+PGYAIEYDY +P++L PTLETK ISGL Sbjct: 306 EVYPNGISTSLPFDVQMGIVNSMKGLEKARIIKPGYAIEYDYFDPRDLKPTLETKSISGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+ + + R SY GV++DDL + G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGINAGLYVQEKEAWYPRRDQSYTGVLVDDLCTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+FTSRAEYR+ LR DNAD RLTPI +LG I E R RF + ++ R L+S+ L Sbjct: 426 YRVFTSRAEYRLLLREDNADIRLTPIAHELGLIDEARWVRFNQKMENIELERQRLRSIWL 485 Query: 484 TSKN 487 ++ Sbjct: 486 HPRS 489 >gi|119510372|ref|ZP_01629507.1| glucose-inhibited division protein A [Nodularia spumigena CCY9414] gi|119465009|gb|EAW45911.1| glucose-inhibited division protein A [Nodularia spumigena CCY9414] Length = 638 Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust. Identities = 274/618 (44%), Positives = 375/618 (60%), Gaps = 11/618 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+G GH+GCEAA AA+LG T L+T I CNPA+GG K L E+DA Sbjct: 10 AFDVIVVGAGHSGCEAALAAARLGCRTLLLTLNLDKIAWQPCNPAVGGPAKSQLTHEVDA 69 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE- 123 L G +G+VAD +Q R+LN +GPAV R Q+D+ Y M+ + +QENL + + Sbjct: 70 LGGEIGKVADRTYLQKRILNSSRGPAVWALRAQSDKREYAAVMKTIVENQENLSIREAMA 129 Query: 124 ---VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 V G N E + + C V+LTTGTFL G I +G +PAGR G+ + Sbjct: 130 TDLVLGANDE---VIGVETYFGVAFGCKAVILTTGTFLGGKIWVGNKSMPAGRAGEFAAE 186 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIE 239 L + + F+TGRLKTGTPAR+D +++ + K Q DE + FSF D I QI Sbjct: 187 GLTQTLNRLGFETGRLKTGTPARVDKRSVDYSKMTIQPGDEEVRWFSFDPDVWIKKEQIP 246 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C ITRT ETHR+I +N+ S +Y G +++ GPRYCPSIEDKIVRF ++ HQIF+EPEG Sbjct: 247 CYITRTTAETHRLIRDNLHLSPVYGGWVEAKGPRYCPSIEDKIVRFADKQSHQIFIEPEG 306 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 + +Y G ST LPE +Q Q +R++PGLE ++RP YA+EYDY+ + +PTL TKK Sbjct: 307 RDIPELYIQGFSTGLPETLQLQMLRSLPGLENCTMLRPAYAVEYDYLPATQCYPTLMTKK 366 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 ISGLF AGQINGTTGYEEAAAQG+VAGIN+AR + I F R SY+G ++DDL +K Sbjct: 367 ISGLFCAGQINGTTGYEEAAAQGIVAGINAARLVRGEEMIVFPREHSYLGTLVDDLCTKD 426 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 + EPYRM TSR+EYR+ LR DNAD RLTP+G ++G I +RR F + ++ L Sbjct: 427 LREPYRMLTSRSEYRLLLRSDNADQRLTPLGREIGLIDDRRWNLFTDKQTQITTEKARLY 486 Query: 480 SLVLTSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 + + + + S+S + + T E L P F +L S E Sbjct: 487 ATRIKEHDEIGQAIASVSQQTIKGSITLAELLRRPGFHYVDLDSYGLGNPNLKQAEKEGA 546 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y+ Y RQ + ++I + R +P D DY+++ LS E +EKLS +KP L QAS Sbjct: 547 EIDIKYSGYLARQQNQIEQIARQAHRQLPADLDYTTIDTLSKEAREKLSKVKPLTLGQAS 606 Query: 597 KIEGMTPAALNLLLIYIK 614 + G+ PA +N LLIY++ Sbjct: 607 RTGGVNPADINALLIYLE 624 >gi|88705406|ref|ZP_01103117.1| Glucose-inhibited division protein A [Congregibacter litoralis KT71] gi|88700496|gb|EAQ97604.1| Glucose-inhibited division protein A [Congregibacter litoralis KT71] Length = 618 Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust. Identities = 269/596 (45%), Positives = 373/596 (62%), Gaps = 11/596 (1%) Query: 27 LGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVK 86 +G +T L+TH T+G MSCNPAIGG+GK HLVREIDAL G M + D AGIQFRVLN + Sbjct: 1 MGCATLLLTHSVDTLGQMSCNPAIGGIGKSHLVREIDALGGAMAKATDQAGIQFRVLNNR 60 Query: 87 KGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIR 146 KGPAVR R QADR LYR A++ I +Q L V Q V E + + +V Q + Sbjct: 61 KGPAVRATRAQADRVLYRNAIRAIIEAQVGLQVFQQAVDDLIIENDTVQGVVTQTGLRFK 120 Query: 147 CSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDG 206 V+LTTGTFL G +HIG + GR GD PSN+L + F RLKTGTP RLD Sbjct: 121 APRVILTTGTFLGGKMHIGLTRSAGGRAGDPPSNTLAERLRELPFRVERLKTGTPPRLDA 180 Query: 207 KTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITRTNLETHRIIMENIKHSAIYSG 265 ++I D EKQ+ D SF+ D+ + Q C + TN TH II + S +Y+G Sbjct: 181 RSIDLDSLEKQWGDTPRPVMSFLGDRREHPEQRCCWVAYTNERTHEIIRAGLDRSPLYTG 240 Query: 266 DIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRT 325 I+ GPRYCPS+EDK+ RF ++ HQ+F+EPEGL T+ +YPNGIST+L ++Q + +R+ Sbjct: 241 VIEGEGPRYCPSVEDKVQRFADKASHQVFVEPEGLTTNELYPNGISTSLSFDVQMELVRS 300 Query: 326 IPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVA 385 I G E +I RPGYAIEYD+ +P++L +LET+ ++GL+ AGQINGTTGYEEAAAQGL+A Sbjct: 301 IKGFENAHITRPGYAIEYDFFDPRDLLSSLETRSVAGLYFAGQINGTTGYEEAAAQGLLA 360 Query: 386 GINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNR 445 GIN+A + C R ++Y+GV++DDL + G EPYRMFTSRAE+R+ LR DNAD R Sbjct: 361 GINAALAIREEAPWCPRRDEAYLGVLVDDLITMGTKEPYRMFTSRAEHRLLLREDNADLR 420 Query: 446 LTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISF------KQDG 499 LT G KLG + + R ++F++ + + + S + L T ST+ K Sbjct: 421 LTEQGRKLGLVNDERWEQFSR---KRDIIVSEQQRLSRTFVQPGSTAARSLIGKLGKPLS 477 Query: 500 KTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFE 559 + + E L P+ ++ ++ DA ++ + I++ YA Y RQ E ++ Sbjct: 478 REYSYAELLKRPELDYSDIAALDSDAVDHEQAALQ-VSIQAKYAGYIDRQRDEIDRVRRY 536 Query: 560 EKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 E +P D DY + LSNE+++KL KP L +AS+I G+TPAA++LLL+++K+ Sbjct: 537 EGLSLPVDMDYLQVSGLSNEVRDKLIAQKPETLGRASRIPGVTPAAISLLLVHMKR 592 >gi|268687460|ref|ZP_06154322.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Neisseria gonorrhoeae SK-93-1035] gi|268627744|gb|EEZ60144.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Neisseria gonorrhoeae SK-93-1035] Length = 631 Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust. Identities = 284/622 (45%), Positives = 388/622 (62%), Gaps = 14/622 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 8 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 67 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R+QADR LY+ +++ + +QENLD+ Q Sbjct: 68 ALGGAMALATDKSGIQFRRLNASKGAAVRATRSQADRILYKASIREMLENQENLDLFQQA 127 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E IS ++ + + VVLT GTFL G IHIG GR GD + SL Sbjct: 128 VEDVTLEGERISGVITAMGAEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 187 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT----DKITNRQIE 239 + GRLKTGTP R+DG+TI + + +Q D P M+ ++ RQ+ Sbjct: 188 GRLRELKLPQGRLKTGTPPRIDGRTIDFSQLTEQPGD---TPVPVMSVRGNAEMHPRQVS 244 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEG Sbjct: 245 CWITHTNTQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEG 304 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 305 LTTHEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKT 364 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG N+ + D + R +Y+GV++DDL +KG Sbjct: 365 IEGLFFAGQINGTTGYEEAAAQGLLAGANAVQYVRGQDPLLLRREQAYLGVLVDDLITKG 424 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 + EPYRMFTSRAEYR+ LR DNAD RLT G K+G +G+ + + F + + LK Sbjct: 425 LNEPYRMFTSRAEYRLQLREDNADMRLTEDGYKIGLVGKAQWRMFNEKREAVEREIQRLK 484 Query: 480 SLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI---CPDARKFSSLVI 533 + + L+ + ++ + ++ L P+ L ++ P R S+ V+ Sbjct: 485 TTWYAPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGAIPSER-LSAEVV 543 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I+ Y Y RQ E + E +P DY + LS E+++KL+ KP + Sbjct: 544 EQVEIQVKYQGYIDRQNEEIDSRRDIETLKLPDGIDYGRVKGLSAEVQQKLNQHKPETVG 603 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I G+TPAA+ LL++++K+ Sbjct: 604 QASRISGVTPAAVALLMVHLKR 625 >gi|74024895|ref|NP_036255.2| protein MTO1 homolog, mitochondrial isoform a [Homo sapiens] gi|18644895|gb|AAG42814.3| MTO1 protein [Homo sapiens] gi|55961489|emb|CAI14880.1| mitochondrial translation optimization 1 homolog (S. cerevisiae) [Homo sapiens] gi|112180532|gb|AAH11051.2| Mitochondrial translation optimization 1 homolog (S. cerevisiae) [Homo sapiens] gi|119569147|gb|EAW48762.1| mitochondrial translation optimization 1 homolog (S. cerevisiae), isoform CRA_c [Homo sapiens] gi|193786654|dbj|BAG51977.1| unnamed protein product [Homo sapiens] Length = 692 Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust. Identities = 285/630 (45%), Positives = 406/630 (64%), Gaps = 25/630 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA+ G+ T L+TH+ TIG MSCNP+ GG+GKGHL+RE+DAL Sbjct: 37 FDVIVIGGGHAGTEAATAAARCGSRTLLLTHRVDTIGQMSCNPSFGGIGKGHLMREVDAL 96 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGL R+ D +G+ ++VLN +KGPAV G R Q DR+LY+ MQ+EIL+ L V +G V Sbjct: 97 DGLCSRICDQSGVHYKVLNRRKGPAVWGLRAQIDRKLYKQNMQKEILNTPLLTVQEGAVE 156 Query: 126 GF--------NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 +T K +S +V+ D S + +V+LTTGTFLRG+I IG PAGR+GD Sbjct: 157 DLILTEPEPEHTGKCRVSGVVLVDGSTVYAESVILTTGTFLRGMIVIGLETHPAGRLGDQ 216 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR- 236 PS L + K F GRLKTGTP R+ ++I + K D IPFSF + + + Sbjct: 217 PSIGLAQTLEKLGFVVGRLKTGTPPRIAKESINFSILNKHIPDNPSIPFSFTNETVWIKP 276 Query: 237 --QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 Q+ C +T TN I+++N+ ++ + GPRYCPSIE K++RF R HQ++ Sbjct: 277 EDQLPCYLTHTNPRVDEIVLKNLHLNSHVKETTR--GPRYCPSIESKVLRFPNRL-HQVW 333 Query: 295 LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT 354 LEPEG+++D++YP G+S LP E+Q + I I GLEK +I+PGY ++YDY++P+++ P+ Sbjct: 334 LEPEGMDSDLIYPQGLSMTLPAELQEKMITCIRGLEKAKVIQPGYGVQYDYLDPRQITPS 393 Query: 355 LETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDD 414 LET + LF AGQINGTTGYEEAAAQG++AGIN++ + ++ SRT+ YIGV+IDD Sbjct: 394 LETHLVQRLFFAGQINGTTGYEEAAAQGVIAGINASLRVSRKPPFVVSRTEGYIGVLIDD 453 Query: 415 LTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMK-LGCIGERRQKRFAKYIQEYNF 473 LT+ G EPYRMFTSR E+R+SLRPDNAD+RLT G K GC+ ++R +R Sbjct: 454 LTTLGTSEPYRMFTSRVEFRLSLRPDNADSRLTLRGYKDAGCVSQQRYERACWMKSSLEE 513 Query: 474 LRSLLKSLVLTS----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA-RKF 528 S+LKS+ S K + SIS + R A + L Y + + +L P+ +K+ Sbjct: 514 GISVLKSIEFLSSKWKKLIPEASISTSRSLPVR-ALDVLKYEEVDMDSLAKAVPEPLKKY 572 Query: 529 SSL--VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLP--ALSNELKEKL 584 + + ERL+IE++Y + Q+ E K ++ +E +PKD DY ++ +LS+E++EKL Sbjct: 573 TKCRELAERLKIEATYESVLFHQLQEIKGVQQDEALQLPKDLDYLTIRDVSLSHEVREKL 632 Query: 585 SILKPFNLLQASKIEGMTPAALNLLLIYIK 614 +P + AS+I G+TPAA+ LL ++K Sbjct: 633 HFSRPQTIGAASRIPGVTPAAIINLLRFVK 662 >gi|21739274|emb|CAD38685.1| hypothetical protein [Homo sapiens] Length = 681 Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust. Identities = 285/630 (45%), Positives = 406/630 (64%), Gaps = 25/630 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA+ G+ T L+TH+ TIG MSCNP+ GG+GKGHL+RE+DAL Sbjct: 26 FDVIVIGGGHAGTEAATAAARCGSRTLLLTHRVDTIGQMSCNPSFGGIGKGHLMREVDAL 85 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGL R+ D +G+ ++VLN +KGPAV G R Q DR+LY+ MQ+EIL+ L V +G V Sbjct: 86 DGLCSRICDQSGVHYKVLNRRKGPAVWGLRAQIDRKLYKQNMQKEILNTPLLTVQEGAVE 145 Query: 126 GF--------NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 +T K +S +V+ D S + +V+LTTGTFLRG+I IG PAGR+GD Sbjct: 146 DLILTEPEPEHTGKCRVSGVVLVDGSTVYAESVILTTGTFLRGMIVIGLETHPAGRLGDQ 205 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR- 236 PS L + K F GRLKTGTP R+ ++I + K D IPFSF + + + Sbjct: 206 PSIGLAQTLEKLGFVVGRLKTGTPPRIAKESINFSILNKHIPDNPSIPFSFTNETVWIKP 265 Query: 237 --QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 Q+ C +T TN I+++N+ ++ + GPRYCPSIE K++RF R HQ++ Sbjct: 266 EDQLPCYLTHTNPRVDEIVLKNLHLNSHVKETTR--GPRYCPSIESKVLRFPNRL-HQVW 322 Query: 295 LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT 354 LEPEG+++D++YP G+S LP E+Q + I I GLEK +I+PGY ++YDY++P+++ P+ Sbjct: 323 LEPEGMDSDLIYPQGLSMTLPAELQEKMITCIRGLEKAKVIQPGYGVQYDYLDPRQITPS 382 Query: 355 LETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDD 414 LET + LF AGQINGTTGYEEAAAQG++AGIN++ + ++ SRT+ YIGV+IDD Sbjct: 383 LETHLVQRLFFAGQINGTTGYEEAAAQGVIAGINASLRVSRKPPFVVSRTEGYIGVLIDD 442 Query: 415 LTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMK-LGCIGERRQKRFAKYIQEYNF 473 LT+ G EPYRMFTSR E+R+SLRPDNAD+RLT G K GC+ ++R +R Sbjct: 443 LTTLGTSEPYRMFTSRVEFRLSLRPDNADSRLTLRGYKDAGCVSQQRYERACWMKSSLEE 502 Query: 474 LRSLLKSLVLTS----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA-RKF 528 S+LKS+ S K + SIS + R A + L Y + + +L P+ +K+ Sbjct: 503 GISVLKSIEFLSSKWKKLIPEASISTSRSLPVR-ALDVLKYEEVDMDSLAKAVPEPLKKY 561 Query: 529 SSL--VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLP--ALSNELKEKL 584 + + ERL+IE++Y + Q+ E K ++ +E +PKD DY ++ +LS+E++EKL Sbjct: 562 TKCRELAERLKIEATYESVLFHQLQEIKGVQQDEALQLPKDLDYLTIRDVSLSHEVREKL 621 Query: 585 SILKPFNLLQASKIEGMTPAALNLLLIYIK 614 +P + AS+I G+TPAA+ LL ++K Sbjct: 622 HFSRPQTIGAASRIPGVTPAAIINLLRFVK 651 >gi|194291177|ref|YP_002007084.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gida [Cupriavidus taiwanensis LMG 19424] gi|193225012|emb|CAQ71023.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA (Glucose-inhibited division protein A) [Cupriavidus taiwanensis LMG 19424] Length = 652 Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust. Identities = 285/627 (45%), Positives = 386/627 (61%), Gaps = 15/627 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNP+IGG+GKGHLV+E+D Sbjct: 5 KEFDVIVVGGGHAGTEAALAAARMGCQTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 A+ G M D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q Sbjct: 65 AMGGAMAAATDEAGIQFRILNSSKGPAVRATRAQADRVLYRKAIRTRLENQPNLMLFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + + + Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 125 VDDLMVEGDRVVGAMTQVGIAFRARAVVLTAGTFLDGKIHVGLDNYTGGRAGDPAAVSLS 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQIECG 241 GRLKTGTP R+DG+TI + E+Q D +P FSF+ + +Q+ C Sbjct: 185 ARLKDLKLPQGRLKTGTPPRIDGRTIDFSVMEEQPGDLDPVPVFSFLGRPEQHPQQLPCW 244 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPEGL Sbjct: 245 ITHTNSRTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPEGLT 304 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ YPNGIST+LP ++Q + + +I GLE +I+RPGYAIEYDY +P+ L +LE+K I Sbjct: 305 TNEFYPNGISTSLPFDVQLELVHSIRGLENAHILRPGYAIEYDYFDPRGLKASLESKAIR 364 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQINGTTGYEEAAAQGL+AGIN+ + D R +Y+GV++DDL ++GV Sbjct: 365 GLFFAGQINGTTGYEEAAAQGLLAGINAGCYVRERDPWTPRRDQAYLGVLVDDLITRGVT 424 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAE+R+SLR DNAD RLT +G +LG + + R F + + LKS Sbjct: 425 EPYRMFTSRAEFRLSLREDNADMRLTEVGRELGVVDDARWDAFNRKRDAVSRETERLKST 484 Query: 482 VLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI-----CPDA-----RKF 528 + L + + K + + + L P+ S + L ++ P+A Sbjct: 485 WVNPSMLPAEEAVPLLGKPIEREYSLADLLRRPEVSYEALMALQGGRHAPEAPLDAEPML 544 Query: 529 SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 + + E+++I Y Y RQ E +++ E +P+ DY+ + L E+ +KL+ + Sbjct: 545 AEQIREQIEIGIKYHGYIARQAAEVDKLEANESTRLPEGLDYTEVRGLGFEVSQKLNQHR 604 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIKK 615 P L QAS+I G+TPAA++LLL+++KK Sbjct: 605 PETLGQASRISGVTPAAVSLLLVHLKK 631 >gi|301762402|ref|XP_002916620.1| PREDICTED: protein MTO1 homolog, mitochondrial-like [Ailuropoda melanoleuca] Length = 692 Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust. Identities = 296/643 (46%), Positives = 418/643 (65%), Gaps = 28/643 (4%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DV+VIGGGHAG EAAA AA+ G+ T L+TH+ TIG MSCNP+ GG+GKGHL+RE+DA Sbjct: 36 NFDVVVIGGGHAGTEAAAAAARCGSRTLLLTHRVDTIGQMSCNPSFGGIGKGHLMREVDA 95 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGL R+ D +G+ +RVLN +KGPAV G R Q DR+LY+ MQ+EIL+ L V +G V Sbjct: 96 LDGLCSRICDQSGVHYRVLNRRKGPAVWGLRAQIDRKLYKQNMQKEILNTPLLAVQEGAV 155 Query: 125 AGF--------NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGD 176 + K +S +V+ D S + +VVLTTGTFLRGVI IG PAGR+GD Sbjct: 156 EDLILTDPEPEHAGKCRVSGVVLADGSTVHAESVVLTTGTFLRGVIVIGLETHPAGRLGD 215 Query: 177 SPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR 236 PS L + K F GRLKTGTP R+ +++ + KQ D IPFSF+ + + + Sbjct: 216 QPSIGLAQTLEKLGFVVGRLKTGTPPRIAKESVNFSILNKQTPDNPSIPFSFINETVWIK 275 Query: 237 ---QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQI 293 Q+ C +T TN I++EN+ ++ + GPRYCPSIE K++RF R HQ+ Sbjct: 276 PEDQLPCYLTHTNPRVDEIVLENLHLNSHVKETTR--GPRYCPSIESKVLRFPNRL-HQV 332 Query: 294 FLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFP 353 +LEPEG+++D++YP G+S LP E+Q + I I GLEK II+PGY ++YDY++P+++ P Sbjct: 333 WLEPEGMDSDLIYPQGLSVTLPAELQEKMITCIKGLEKAKIIQPGYGVQYDYLDPRQITP 392 Query: 354 TLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMID 413 +LET + LFLAGQINGTTGYEEAAAQG++AGIN++ + + SRT+ YIGV+ID Sbjct: 393 SLETHLVQRLFLAGQINGTTGYEEAAAQGVIAGINASLRVKRKPPFVVSRTEGYIGVLID 452 Query: 414 DLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMK-LGCIGERRQKRFAKYIQEYN 472 DLT+ G EPYRMFTSRAE+R+SLRPDNAD+RLT G K +GC+ +RR +R + Sbjct: 453 DLTTLGTNEPYRMFTSRAEFRLSLRPDNADSRLTFRGYKEVGCVSQRRYERASWMKSSLE 512 Query: 473 FLRSLLKSLVLTS----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA-RK 527 S+LKS+ +S K + + SIS + R A + L Y + ++ L P+ +K Sbjct: 513 EGISVLKSIEFSSSKWKKLIPAASISIGKSLPLR-ALDVLKYEEVDMKLLAKAVPEPLKK 571 Query: 528 FSSL--VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSL--PALSNELKEK 583 + + ERL+IE++Y + Q E KE++ +E +PKD DY +L +LS E++EK Sbjct: 572 YIKCRELAERLKIEATYESVLLHQQQEIKEVQQDEALQLPKDLDYLTLRDVSLSYEVREK 631 Query: 584 LSILKPFNLLQASKIEGMTPAALNLLLIYIK---KNTVKLNEI 623 L +P + AS+I G+TPAA+ LL ++K + + +NE+ Sbjct: 632 LHFSRPETIGAASRIPGVTPAAIINLLRFVKTTQQRQMAMNEL 674 >gi|300857410|ref|YP_003782394.1| glucose inhibited division protein A [Clostridium ljungdahlii DSM 13528] gi|300437525|gb|ADK17292.1| glucose inhibited division protein A [Clostridium ljungdahlii DSM 13528] Length = 628 Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust. Identities = 267/614 (43%), Positives = 383/614 (62%), Gaps = 4/614 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEA AA++G T + T ++G M CNP +GG KGHLVREIDAL Sbjct: 8 YDVIVVGAGHAGCEAGLAAARMGCKTLVCTMNLDSVGFMPCNPNVGGTAKGHLVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG D IQ R+LN KGPAV R QAD++ Y + M+ + Q NL + Q EV Sbjct: 68 GGEMGVNIDHTFIQSRMLNTSKGPAVHSLRAQADKKNYSVRMKEVLEKQNNLSLRQIEVL 127 Query: 126 GFNTE-KNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 T+ K + ++ ++ + TVVL TGT+L+G + IG + +G G P+N L Sbjct: 128 SIRTDDKGKVCGVLTKNGAYFETKTVVLATGTYLKGKVIIGDVSYSSGPNGFMPANDLSQ 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S + + R KTGTPAR++ +++ + K +Q D++++PFSFM+ + QI C +T Sbjct: 188 SLLDLGIELRRFKTGTPARVNKRSVDFSKMIEQPGDKKIVPFSFMSGSLDRSQISCYLTY 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T T ++I +NI S +Y+G IKS GPRYCPSIEDK++RF ++ HQIF+EPEG NTD Sbjct: 248 TTENTLKVIRDNINRSPLYNGSIKSVGPRYCPSIEDKVMRFPDKEKHQIFIEPEGENTDE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y +G ST++PE++Q RTI GLE V +R GYAIEYD INP +L +LE KK+ GLF Sbjct: 308 LYVDGASTSMPEDVQIAMYRTIAGLENVEFLRTGYAIEYDCINPTQLKLSLEFKKVEGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ+NG++GYEEAA+QG++AGIN+A KS + R+D YIGV++DDL +KG EPY Sbjct: 368 GAGQLNGSSGYEEAASQGIIAGINAALKSQGNPPLILKRSDGYIGVLVDDLVTKGTQEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSRAEYR+ LR DNAD RLT +G K+G + E R ++ K + +K + +T Sbjct: 428 RMMTSRAEYRLILRQDNADLRLTELGHKIGLVSEERYGKYLKRKSDIEKEVERIKDIHIT 487 Query: 485 SKNLSS---TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 K SI + KT + YE + P+ + + D + + E + I S Sbjct: 488 PKKEVVDFLNSIGSSELKKTTSLYELIKRPELDYFKVQPLDVDRPELGEDIQEEVNIISK 547 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y +Q+ + + K E ++IP+D +Y + L E +KL ++P ++ QAS+I G+ Sbjct: 548 YEGYIEKQLEQVSQFKKFENKIIPEDINYDKINGLRIEATQKLKKIRPMSVGQASRISGV 607 Query: 602 TPAALNLLLIYIKK 615 +PA +++LLIY++K Sbjct: 608 SPADISVLLIYMEK 621 >gi|257460598|ref|ZP_05625699.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Campylobacter gracilis RM3268] gi|257441929|gb|EEV17071.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Campylobacter gracilis RM3268] Length = 630 Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust. Identities = 283/619 (45%), Positives = 380/619 (61%), Gaps = 9/619 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAG EA+ AAK+GA T LIT IG+ SCNPAIGGL KGHLV+EIDAL Sbjct: 3 YDVIVVGGGHAGIEASLAAAKMGAKTLLITILAEQIGAASCNPAIGGLAKGHLVKEIDAL 62 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG ADA G+QFR+LN KGPAVRG R Q D + YR+ M+ +L+ + LD+ Q E+A Sbjct: 63 GGQMGLAADACGLQFRILNESKGPAVRGSRAQIDMDEYRIYMRNLLLNTQGLDISQ-EIA 121 Query: 126 G--FNTEK---NIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 E+ + + ++ +++T GTFL G+IH+G+ K+ AGR+G+ S Sbjct: 122 SEILTCEQGGEQRVCGVKSHLGNVYETERLIITAGTFLNGLIHVGENKLQAGRVGELASV 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 L S GRLKTGT R+D KTI + E+Q D PFSF + +Q+ C Sbjct: 182 ELAESLRSLGLQMGRLKTGTCPRIDAKTIDFSVLERQDGDADPRPFSFRSKDFAPKQLAC 241 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 I TN TH II EN + +++G I S GPRYCPSIE KI F R+ H +F+EP+ Sbjct: 242 FIAYTNERTHEIIRENFTRAPMFTGQISSTGPRYCPSIETKIYEFPNRDRHHVFVEPQTR 301 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 Y NG+ST+LP ++Q F+RTI G E I+RPGYAIEYD+I+P EL +LETKKI Sbjct: 302 EATEYYVNGLSTSLPYDVQIAFLRTIRGFENAKIVRPGYAIEYDFIDPTELKHSLETKKI 361 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLFLAGQINGTTGYEEAAAQGL+AGIN+ + R ++YIGV+IDDL +KG Sbjct: 362 RGLFLAGQINGTTGYEEAAAQGLMAGINAVLDLRGRQPLILRRDEAYIGVLIDDLVTKGT 421 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNF-LRSLLK 479 EPYRMFTSRAE+R+ LR NA RL+ G ++G + E +R +K+ + + LLK Sbjct: 422 NEPYRMFTSRAEFRLLLREGNAVLRLSEYGREIGLLDEASYERASKFKHDVQSGMEFLLK 481 Query: 480 SLVLTSKNLSS--TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 + + SK S SI + ++ + + S FS L ++ P + FS V++ + Sbjct: 482 TQITPSKQTLSLLQSIGAEPISQSCSLQKIASQSGFSKAGLLALVPHFKGFSDEVLDEIL 541 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 + Y Y Q E + +K IP D+S + LSNE+ +KL+ P L AS+ Sbjct: 542 TQCKYHFYIAMQRAEVERMKGLLDVAIPPQIDFSKIGGLSNEIVQKLNRFAPPTLFAASE 601 Query: 598 IEGMTPAALNLLLIYIKKN 616 I G+TPAA+++L IYIK+N Sbjct: 602 ISGVTPAAIDILHIYIKQN 620 >gi|194880728|ref|XP_001974514.1| GG21052 [Drosophila erecta] gi|190657701|gb|EDV54914.1| GG21052 [Drosophila erecta] Length = 661 Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust. Identities = 281/634 (44%), Positives = 414/634 (65%), Gaps = 27/634 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+VIGGGHAG EA+A AA++G+ T L+THK TIG MSCNP+ GG+GKGHL+RE+DAL Sbjct: 31 YDVVVIGGGHAGTEASAAAARMGSRTLLLTHKLETIGEMSCNPSFGGIGKGHLMREVDAL 90 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DG+ R D +G+ ++VLN ++GPAV GPR Q DR+LY+ A+Q+E+ S NL++ V Sbjct: 91 DGVCARCCDVSGVHYKVLNRRRGPAVWGPRAQIDRQLYKKAVQQELHSTPNLEIRAAAVD 150 Query: 126 GF------NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 +TE + +++ + ++R +VVLTTGTFLR I+IG PAGR+GD+P+ Sbjct: 151 NLLIEDEQDTEARRCTGVLLANGEVVRSRSVVLTTGTFLRAHINIGLEVRPAGRIGDAPA 210 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI---TNR 236 +L + + F GRLKTGTP R+ ++ + + ++ D+ +PFSF+ + Sbjct: 211 KALGEAIDRLGFRMGRLKTGTPPRIAKNSVDYSQLQRHEGDDPPMPFSFLNKDVWLPAKD 270 Query: 237 QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLE 296 Q+ C +T T + I+ +N+ + + +I GPRYCPSIE KI+RFG + HQ++LE Sbjct: 271 QLPCYLTYTTPKVSDIVRDNLHVNRHVTEEIT--GPRYCPSIESKILRFGAKV-HQVWLE 327 Query: 297 PEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLE 356 PEGL++ +VYP GIS LP + Q + + I GLEK +++PGY +EYD+I+P+EL+PTLE Sbjct: 328 PEGLDSPLVYPQGISCTLPHDQQVELVHAIQGLEKAVVVQPGYGVEYDFIDPRELYPTLE 387 Query: 357 TKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDC--ICFSRTDSYIGVMIDD 414 TK++ GLF AGQINGTTGYEEAAAQG++AG N+A K+ D + SRT+ YIGV+IDD Sbjct: 388 TKRVPGLFFAGQINGTTGYEEAAAQGIIAGANAAGKTRHGDGRQLTISRTEGYIGVLIDD 447 Query: 415 LTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFL 474 LTS G EPYRMFTSRAE+R+SLRPDNAD RLT G + G + R + F Q L Sbjct: 448 LTSLGTNEPYRMFTSRAEFRLSLRPDNADMRLTKKGYEFGLVSSDRYQHFQ---QTEERL 504 Query: 475 RSLLKSLVLTSKNL----SSTSISFKQDGKTRTAYEFLSYP--DFSIQNLFSICPDARKF 528 +S ++SL K+ + + + +TA++ L P + +I+ L I P+ + Sbjct: 505 QSAIESLRQLRKHTHFWRQALDLPKAKASVEKTAFDMLGIPADNITIEQLIQIHPNELSW 564 Query: 529 ---SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDY-SSLPALSNELKEKL 584 + ERL+IE+ Y+ + Q + ++++ EE+ IP D DY S +LSNE ++KL Sbjct: 565 LKGERNLAERLKIEALYSFFVDEQQRDVEDVRREERLSIPADIDYFSKSLSLSNEERQKL 624 Query: 585 SILKPFNLLQASKIEGMTPAALNLLLIYIKKNTV 618 ++++P + AS+I+G+TP+ + +L Y+KK V Sbjct: 625 TLIQPQTIAAASRIQGVTPSTIVRILKYVKKAEV 658 >gi|303327868|ref|ZP_07358308.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Desulfovibrio sp. 3_1_syn3] gi|302862229|gb|EFL85163.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Desulfovibrio sp. 3_1_syn3] Length = 646 Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust. Identities = 275/630 (43%), Positives = 375/630 (59%), Gaps = 17/630 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M + +D I+ GGGHAG EAA A+LG S LI+ +G +SCNPAIGGL KGH+VR Sbjct: 1 MPDAGFDCIIAGGGHAGSEAAVALARLGFSVLLISGNLDRLGYLSCNPAIGGLAKGHMVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G+MG ADAAGIQFR LN+ KGPAVR R Q DR+ Y+ +++ + + L + Sbjct: 61 EIDALGGMMGLWADAAGIQFRTLNMSKGPAVRATRAQMDRDAYQRVLKKTLYATPGLRLW 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V T+ ++ + V+LTTGTFL G IHIG +P GR+GD+P+ Sbjct: 121 QDTVTDVVTDAGRVTGVRTAQGLEFTARHVLLTTGTFLDGRIHIGLTNLPGGRLGDAPAL 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 L +S + GRLKTGT RL +I + + E+Q D FSF Q+ C Sbjct: 181 GLSDSLRALGLELGRLKTGTTPRLLRSSIDFSRLEEQRGDTPPPAFSFHGPGPVLPQVSC 240 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT T+ TH II S +++G I+ G RYCPSIEDK+ RF +R HQIFLEPEGL Sbjct: 241 HITWTSGRTHEIIRGGFDRSPLFTGVIQGVGARYCPSIEDKVARFPQRERHQIFLEPEGL 300 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 ++ VY NGIST+LP ++Q +R+IPGLE ++RPGYAIEYDY+NP +L PTLE+K + Sbjct: 301 DSAEVYANGISTSLPLDVQMAMLRSIPGLEGAVMVRPGYAIEYDYVNPVQLRPTLESKNV 360 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GL+LAGQINGT+GYEEAAAQGL A +N R +L R +Y+ V++DDL + G Sbjct: 361 PGLWLAGQINGTSGYEEAAAQGLWAALNIVRAEKELPPFAPGRDAAYMAVLVDDLVTLGT 420 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAE+R+ LR DNAD RLTP+G LG +G+ + F + + L+ L++ Sbjct: 421 QEPYRMFTSRAEHRLLLREDNADARLTPLGRDLGLVGDAHWRAFCEKRENAERLKKHLEN 480 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSIC-----PDARKFSSLVIE- 534 + + + + + G R+ + L PD ++ L ++ P A + L E Sbjct: 481 MRIPADKQDENNDAALPPG--RSLEDVLRRPDMDLERLAAVLAASPGPLAGLGAELAAEL 538 Query: 535 ---------RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 +Q + YA Y RQ E +P D DY+ + LS E++EKLS Sbjct: 539 ERCGRTVYGGVQTDIKYAGYLERQRALIARTARLEATALPSDLDYARVAGLSREVEEKLS 598 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 ++P NL QA +I G+TPAA+ L I++ K Sbjct: 599 RVRPLNLGQAGRISGVTPAAVACLEIHLHK 628 >gi|15676120|ref|NP_273251.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria meningitidis MC58] gi|7225413|gb|AAF40650.1| glucose inhibited division protein A [Neisseria meningitidis MC58] Length = 631 Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust. Identities = 284/621 (45%), Positives = 386/621 (62%), Gaps = 12/621 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L++H T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 8 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLSHNIETLGQMSCNPSIGGIGKGHLVRELD 67 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY+ A++ + +QENLD+ Q Sbjct: 68 ALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKAAIREMLENQENLDLFQQA 127 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + IS ++ + VVLT GTFL G IHIG GR GD + SL Sbjct: 128 VEDVTLDGERISGVITAMGVEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 187 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK----ITNRQIE 239 + GRLKTGTP R+DG+TI + + +Q D P M+ + + RQ+ Sbjct: 188 GRLRELKLPQGRLKTGTPPRIDGRTIDFSQLTEQPGD---TPVPVMSVRGNADMHPRQVS 244 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEG Sbjct: 245 CWITHTNTQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEG 304 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 305 LTTHEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKT 364 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I+GLF AGQINGTTGYEEAAAQGL+AG N+ + D + R +Y+GV++DDL +KG Sbjct: 365 IAGLFFAGQINGTTGYEEAAAQGLLAGANAVQYVRGQDPLLLRREQAYLGVLVDDLITKG 424 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 V EPYRMFTSRAEYR+ LR DNAD RLT G K+G + E + + F + + LK Sbjct: 425 VNEPYRMFTSRAEYRLQLREDNADMRLTEDGYKIGLVSEAQWRMFNEKREAVEREIQRLK 484 Query: 480 SLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI--CPDARKFSSLVIE 534 + T + L+ + ++ + ++ L P+ L ++ + S+ VIE Sbjct: 485 TTWYTPQKLAEGEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGAMPSENLSAEVIE 544 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E + E +P DY + LS E+++KL+ KP + Q Sbjct: 545 QVEIQVKYQGYIDRQNEEIDSRRDIETLKLPDGIDYGKVKGLSAEVQQKLNQHKPETVGQ 604 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G+TPAA+ LL++++K+ Sbjct: 605 ASRISGVTPAAVALLMVHLKR 625 >gi|317968240|ref|ZP_07969630.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Synechococcus sp. CB0205] Length = 640 Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust. Identities = 269/623 (43%), Positives = 383/623 (61%), Gaps = 4/623 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAGCEAA AA+LG STAL + I CNPA+GG K LV E+DAL Sbjct: 12 FDVIVVGGGHAGCEAAITAARLGCSTALFSLNLDRIAWQPCNPAVGGPAKSQLVHEVDAL 71 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G++GR+ADA +Q RVLN +GPAV R Q D+ Y M + + NL + + V Sbjct: 72 GGVIGRLADATALQKRVLNASRGPAVWALRAQTDKRQYSRQMLQLLQHTPNLALREAMVT 131 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 G E I + S V+LT GTFL G I +G + AGR G+ + L + Sbjct: 132 GLVVEDAAIQGVRTYFGSTYSAGAVILTAGTFLGGQIWVGHQSMSAGRAGEQAAEGLTEA 191 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSF-MTDKITNRQIECGITR 244 + F T RLKTGTPAR+D ++I D+ E+Q +D FSF T ++ Q+ C ITR Sbjct: 192 LQELGFQTDRLKTGTPARVDRRSIALDQLEEQPSDAADRFFSFDPTSWVSGEQMSCHITR 251 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T TH++I +N+ + IY G I S GPRYCPSIEDKIVRF ++ HQIFLEPEG +T Sbjct: 252 TTAATHQLIKDNLHLTPIYGGVIDSKGPRYCPSIEDKIVRFAGKDSHQIFLEPEGRDTPE 311 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G ST LPE +Q + +RT+PGLE+ ++RP YA++YDY+ +L P+LETK++ GLF Sbjct: 312 IYVQGFSTGLPERLQLELLRTLPGLEQCVMLRPAYAVDYDYLPATQLKPSLETKRVKGLF 371 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ+NGTTGYEEAAAQGLVAG+N+ R+ + + + F R SYIG MIDDL +K + EPY Sbjct: 372 SAGQLNGTTGYEEAAAQGLVAGLNAVRQLRQQEPVHFPREGSYIGTMIDDLITKDLREPY 431 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSR+EYR+ LR DNAD RLTP+G +LG I +RR + + + + + L+S+ L Sbjct: 432 RVLTSRSEYRLVLRGDNADRRLTPLGRELGLIDDRRWEIYQRKQEAIEAEKQRLESVRLK 491 Query: 485 SKNLSSTSISFKQDGKTR---TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 + + +++ + + T + L P F +L + V E +I+ Sbjct: 492 VSDPVAPAVAEETKAAIKGSITLADLLRRPGFHSGDLVRHGLAEAELPLDVREGAEIDIK 551 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y+ Y RQ + ++K + +R IP+ DY + LS E +EKLS ++P NL QAS+I G+ Sbjct: 552 YSGYLARQQQQIDQLKKQAERRIPEGIDYEQIGTLSREAREKLSAIEPSNLGQASRIPGV 611 Query: 602 TPAALNLLLIYIKKNTVKLNEIV 624 + A + L+++++ ++ + N +V Sbjct: 612 SHADVTALMLWLELDSRRNNTLV 634 >gi|119467688|ref|XP_001257650.1| mitochondrial translation optimization protein (Mto1), putative [Neosartorya fischeri NRRL 181] gi|119405802|gb|EAW15753.1| mitochondrial translation optimization protein (Mto1), putative [Neosartorya fischeri NRRL 181] Length = 692 Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust. Identities = 283/635 (44%), Positives = 391/635 (61%), Gaps = 23/635 (3%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 R+YDV+VIGGGHAG EA+A AA+ GA TAL+T S IG SCNP+ GG+GKG ++REI Sbjct: 35 TRAYDVVVIGGGHAGSEASAAAARSGARTALVTPSLSNIGVCSCNPSFGGIGKGTMIREI 94 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DA+DG+ GR+ D AGI FR+LN KGPAV GPR Q DR+LY+ MQ E+++ E L +++G Sbjct: 95 DAMDGVAGRIIDKAGIMFRILNRSKGPAVWGPRAQIDRDLYKKYMQEELVATEGLSIVEG 154 Query: 123 EVAGFNTEK----NI------ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAG 172 +VA K NI I + ++ +I VV+TTGTFL G IHIG P+G Sbjct: 155 KVADIVVSKEGVENIPGSQGKIVGVRLESGEVIPTGRVVITTGTFLGGEIHIGLEAYPSG 214 Query: 173 RMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK 232 RMG++ + L S + F GRLKTGTP RLD KTI + E Q D PFS++ Sbjct: 215 RMGEAATFGLSKSLREAGFQLGRLKTGTPPRLDLKTIDFPPLEIQRGDSPPQPFSYLNTT 274 Query: 233 IT---NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERN 289 + Q+ C +T TN +H I+ N+ S ++ GPRYCPS+E KI+RF ++ Sbjct: 275 VDVGDEGQLTCWMTHTNEASHEIVRANLDKSIHIRETVR--GPRYCPSLESKIIRFTDKK 332 Query: 290 GHQIFLEPEGLN-TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINP 348 HQI+LEPEG +VVYPNGIS +P + Q+ +RT+ GLE V +++PGY +EYDYI+P Sbjct: 333 QHQIWLEPEGFAPNEVVYPNGISMTIPADAQYALLRTVRGLENVRMLQPGYGVEYDYIDP 392 Query: 349 KELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYI 408 + L PTLETK ISGL+LAGQINGTTGYEEAA QG++AG N+ + +R+D +I Sbjct: 393 RNLRPTLETKLISGLYLAGQINGTTGYEEAAGQGIIAGTNAGLSAQGRQPFTLTRSDGFI 452 Query: 409 GVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYI 468 G+MIDDL +KGV EPYRMFT+R+EYRIS R DNAD RLT + G + +RR + F Sbjct: 453 GIMIDDLITKGVSEPYRMFTARSEYRISTRSDNADLRLTRMARDAGVVSDRRWRYFTDTE 512 Query: 469 QEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLF-------SI 521 + L++LL + L+S S + D R+A + L I L + Sbjct: 513 AQIKELQNLLANTKLSSTVWSRKGFKTRTDSSVRSALDLLCLDGVDIDALIPHIESPSGM 572 Query: 522 CPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELK 581 F S++ R+ IE YA Y RQ A++ +E ++P D DYS + +S E + Sbjct: 573 AYTPSSFDSIIRTRVSIEGRYAPYVKRQEAMARKFLQDESLILPPDLDYSKVQGISTEER 632 Query: 582 EKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKN 616 + L ++P ++ A +IEG+TPA LL+++++ Sbjct: 633 QALERVRPVSVGMARRIEGVTPAGALRLLMHVRRT 667 >gi|29839891|ref|NP_828997.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Chlamydophila caviae GPIC] gi|33301152|sp|Q824M2|MNMG_CHLCV RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|29834238|gb|AAP04875.1| glucose inhibited division protein A [Chlamydophila caviae GPIC] Length = 611 Score = 516 bits (1330), Expect = e-144, Method: Compositional matrix adjust. Identities = 273/617 (44%), Positives = 379/617 (61%), Gaps = 20/617 (3%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAGCEAA +AK+GAS ++T TI +SCNPA+GG+GKGH+VREIDA Sbjct: 7 NYDVIVVGAGHAGCEAAFCSAKMGASVLILTSNLDTIAKLSCNPAVGGIGKGHIVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G+M V D +GIQFR+LN KGPAVR PR Q D+++Y + M+R + S L ++QG V Sbjct: 67 LGGIMAEVTDQSGIQFRILNQTKGPAVRAPRAQVDKQMYHIHMKRLLESTPGLHIMQGTV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 +N+I + ++ TV+L++GTF+RG+IHIG L P GR+GD + L Sbjct: 127 ESLLDNENVIQGVTTKEGITYLGKTVILSSGTFMRGLIHIGDLNFPGGRLGDPAATGLSA 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR--QIECGI 242 + + F RLKTGTP RL +I + E+Q D + F + Q+ C I Sbjct: 187 ALKERGFPISRLKTGTPPRLLASSIDFSVAEEQPGDPG-VGFVHRDEPFVPPLPQVSCYI 245 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T T +T II NI SA+Y G I+ GPRYCPSIEDKIV+F ++ H IF+EPEG+ T Sbjct: 246 THTTQKTKDIIAANISRSALYGGRIEGIGPRYCPSIEDKIVKFADKERHHIFIEPEGIYT 305 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 VY NG+ST++P ++Q+ IR++ GLE I RP YAIEYDY++ ++PTLE+K + G Sbjct: 306 QEVYVNGLSTSMPFDVQYNMIRSVHGLENAIITRPAYAIEYDYVHGNVIYPTLESKIVEG 365 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LFL GQINGTTGYEEAAAQGL+AGIN+ K K SR +SYIGVM+DDLT++ + E Sbjct: 366 LFLCGQINGTTGYEEAAAQGLIAGINAVNKVLKKPAFIPSRQESYIGVMLDDLTTQVLDE 425 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFT RAE+R+ LR DNA RL+ G LG + Q+R+ + + + L Sbjct: 426 PYRMFTGRAEHRLLLRQDNACLRLSHYGRDLGLLS---QERYEIFENQKQIIEDEKARLN 482 Query: 483 LTSKNLSSTSISF-KQDGKTRTAYEFL--SYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 T K ++ +S K + +Y+ L ++PD D R S + L++E Sbjct: 483 KTFKKYGNSVVSLAKALCRPEVSYDILRETFPD-----------DVRDLGSTLNASLEME 531 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 YA Y RQ + E +IP+D DY S+ +LS E +EKL+ P + AS+I Sbjct: 532 IKYAGYIDRQKSLIHSLSKSENMVIPEDIDYQSISSLSLEAREKLAKFTPRTIGSASRIS 591 Query: 600 GMTPAALNLLLIYIKKN 616 G+ A + +L++ +KK+ Sbjct: 592 GIACADIQVLMVAVKKH 608 >gi|21263694|sp|Q9K1G0|MNMG_NEIMB RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|325199405|gb|ADY94860.1| glucose-inhibited division protein A [Neisseria meningitidis H44/76] Length = 628 Score = 516 bits (1330), Expect = e-144, Method: Compositional matrix adjust. Identities = 284/621 (45%), Positives = 386/621 (62%), Gaps = 12/621 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L++H T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 5 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLSHNIETLGQMSCNPSIGGIGKGHLVRELD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY+ A++ + +QENLD+ Q Sbjct: 65 ALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKAAIREMLENQENLDLFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + IS ++ + VVLT GTFL G IHIG GR GD + SL Sbjct: 125 VEDVTLDGERISGVITAMGVEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK----ITNRQIE 239 + GRLKTGTP R+DG+TI + + +Q D P M+ + + RQ+ Sbjct: 185 GRLRELKLPQGRLKTGTPPRIDGRTIDFSQLTEQPGD---TPVPVMSVRGNADMHPRQVS 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEG Sbjct: 242 CWITHTNTQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 302 LTTHEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKT 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I+GLF AGQINGTTGYEEAAAQGL+AG N+ + D + R +Y+GV++DDL +KG Sbjct: 362 IAGLFFAGQINGTTGYEEAAAQGLLAGANAVQYVRGQDPLLLRREQAYLGVLVDDLITKG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 V EPYRMFTSRAEYR+ LR DNAD RLT G K+G + E + + F + + LK Sbjct: 422 VNEPYRMFTSRAEYRLQLREDNADMRLTEDGYKIGLVSEAQWRMFNEKREAVEREIQRLK 481 Query: 480 SLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI--CPDARKFSSLVIE 534 + T + L+ + ++ + ++ L P+ L ++ + S+ VIE Sbjct: 482 TTWYTPQKLAEGEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGAMPSENLSAEVIE 541 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E + E +P DY + LS E+++KL+ KP + Q Sbjct: 542 QVEIQVKYQGYIDRQNEEIDSRRDIETLKLPDGIDYGKVKGLSAEVQQKLNQHKPETVGQ 601 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G+TPAA+ LL++++K+ Sbjct: 602 ASRISGVTPAAVALLMVHLKR 622 >gi|159122420|gb|EDP47541.1| mitochondrial translation optimization protein (Mto1), putative [Aspergillus fumigatus A1163] Length = 693 Score = 516 bits (1330), Expect = e-144, Method: Compositional matrix adjust. Identities = 281/634 (44%), Positives = 390/634 (61%), Gaps = 23/634 (3%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 R+YDV+VIGGGHAG EA+A AA+ GA TAL+T S IG SCNP+ GG+GKG ++REI Sbjct: 35 TRAYDVVVIGGGHAGSEASAAAARSGARTALVTPSLSNIGVCSCNPSFGGIGKGTMIREI 94 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DA+DG+ GR+ D AGI FR+LN KGPAV GPR Q DR+LY+ MQ E+L+ E L +++G Sbjct: 95 DAMDGVAGRIIDKAGIMFRILNRSKGPAVWGPRAQIDRDLYKRYMQEELLATEGLSIVEG 154 Query: 123 EVAGFNTEK----NI------ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAG 172 +VA K NI I + ++ +I VV+TTGTFL G IHIG P+G Sbjct: 155 KVADIVVSKEGVENIPGSQGKIVGVRLESGEVIPTGRVVITTGTFLGGEIHIGLEAYPSG 214 Query: 173 RMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK 232 RMG++ + L S + F GRLKTGTP RLD KTI + E Q D PFS++ Sbjct: 215 RMGEAATFGLSKSLREAGFQLGRLKTGTPPRLDMKTIDFAPLEVQRGDSPPQPFSYLNTT 274 Query: 233 IT---NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERN 289 + Q+ C +T TN +H I+ N+ S ++ GPRYCPS+E KI+RF ++ Sbjct: 275 VDVGDEGQLTCWMTHTNEASHEIVRANLDKSIHIRETVR--GPRYCPSLESKIIRFTDKK 332 Query: 290 GHQIFLEPEGLN-TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINP 348 HQI+LEPEG +V+YPNGIS +P + Q+ +RT+ GLE V +++PGY +EYDYI+P Sbjct: 333 QHQIWLEPEGFAPNEVIYPNGISMTIPADAQYALLRTVRGLENVRMLQPGYGVEYDYIDP 392 Query: 349 KELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYI 408 + L PTLETK ISGL+LAGQINGTTGYEEAA QG++AG N+ + + +R+D +I Sbjct: 393 RNLRPTLETKLISGLYLAGQINGTTGYEEAAGQGIIAGTNAGLSAQGRQPLTLTRSDGFI 452 Query: 409 GVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYI 468 G+MIDDL +KGV EPYRMFT+R+EYRIS R DNAD RLT + G + ++R + F Sbjct: 453 GIMIDDLITKGVSEPYRMFTARSEYRISTRSDNADLRLTRMARDAGVVSDKRWRSFTDTE 512 Query: 469 QEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLF-------SI 521 + L++LL L+S S + D R+A + L I L + Sbjct: 513 AQIKELQNLLAKTKLSSTMWSRKGFKTRTDSSVRSALDLLCLDGVDIDTLIPHIESPSGM 572 Query: 522 CPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELK 581 F ++ R+ IE YA Y RQ A++ +E ++P D DYS + +S E + Sbjct: 573 AYTPSSFDPIIRTRVSIEGRYAPYVKRQEAMARKFLQDESLILPPDLDYSKVQGISTEER 632 Query: 582 EKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 + L ++P ++ A +IEG+TPA LL+++++ Sbjct: 633 QALERVRPVSVGMARRIEGVTPAGALRLLMHVRR 666 >gi|316985720|gb|EFV64666.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria meningitidis H44/76] Length = 648 Score = 516 bits (1330), Expect = e-144, Method: Compositional matrix adjust. Identities = 284/621 (45%), Positives = 386/621 (62%), Gaps = 12/621 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L++H T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 25 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLSHNIETLGQMSCNPSIGGIGKGHLVRELD 84 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY+ A++ + +QENLD+ Q Sbjct: 85 ALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKAAIREMLENQENLDLFQQA 144 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + IS ++ + VVLT GTFL G IHIG GR GD + SL Sbjct: 145 VEDVTLDGERISGVITAMGVEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 204 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK----ITNRQIE 239 + GRLKTGTP R+DG+TI + + +Q D P M+ + + RQ+ Sbjct: 205 GRLRELKLPQGRLKTGTPPRIDGRTIDFSQLTEQPGD---TPVPVMSVRGNADMHPRQVS 261 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEG Sbjct: 262 CWITHTNTQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEG 321 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 322 LTTHEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKT 381 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I+GLF AGQINGTTGYEEAAAQGL+AG N+ + D + R +Y+GV++DDL +KG Sbjct: 382 IAGLFFAGQINGTTGYEEAAAQGLLAGANAVQYVRGQDPLLLRREQAYLGVLVDDLITKG 441 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 V EPYRMFTSRAEYR+ LR DNAD RLT G K+G + E + + F + + LK Sbjct: 442 VNEPYRMFTSRAEYRLQLREDNADMRLTEDGYKIGLVSEAQWRMFNEKREAVEREIQRLK 501 Query: 480 SLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI--CPDARKFSSLVIE 534 + T + L+ + ++ + ++ L P+ L ++ + S+ VIE Sbjct: 502 TTWYTPQKLAEGEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGAMPSENLSAEVIE 561 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E + E +P DY + LS E+++KL+ KP + Q Sbjct: 562 QVEIQVKYQGYIDRQNEEIDSRRDIETLKLPDGIDYGKVKGLSAEVQQKLNQHKPETVGQ 621 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G+TPAA+ LL++++K+ Sbjct: 622 ASRISGVTPAAVALLMVHLKR 642 >gi|237739895|ref|ZP_04570376.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG 2 [Fusobacterium sp. 2_1_31] gi|229423503|gb|EEO38550.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG 2 [Fusobacterium sp. 2_1_31] Length = 633 Score = 516 bits (1330), Expect = e-144, Method: Compositional matrix adjust. Identities = 275/630 (43%), Positives = 382/630 (60%), Gaps = 21/630 (3%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +D+IV+G GHAGCEAA +A++G TA+ T IG MSCNP++GG K HL REID Sbjct: 2 QEFDIIVVGAGHAGCEAALASARMGMKTAVFTISLDNIGVMSCNPSLGGPAKSHLAREID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G MGR D IQ RVLN KKGPAVR R QAD+ Y M++ + +NL VIQG Sbjct: 62 ALGGEMGRNIDKTFIQIRVLNTKKGPAVRSLRAQADKMTYANEMKKTLEHTDNLTVIQGM 121 Query: 124 VAGFNTE----KNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 V+ E K +I I +++ R V+L TGTFLRG+IHIG++ AGRMG+ S Sbjct: 122 VSELVVEEENGKKVIKGIKIREGLEYRAKIVILATGTFLRGLIHIGEVNFSAGRMGELSS 181 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADE-RLIPFSFMT---DKITN 235 L S K GR KTGTPAR+DG+TI + E+Q D+ +++ FS T + ++ Sbjct: 182 EELPLSLEKVGLKLGRFKTGTPARIDGRTIDFSVLEEQPGDKSQVLKFSNRTTDEEALSR 241 Query: 236 RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFL 295 RQI C I TN + H II + S +++G I+ GPRYCPSIEDK+ R+ ++N H +FL Sbjct: 242 RQISCYIAHTNDKVHEIIKNARERSPMFNGKIQGLGPRYCPSIEDKVFRYPDKNQHHLFL 301 Query: 296 EPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTL 355 E EG T+ +Y G+S++LP ++Q + IR + G E ++R YAIEYDY+ P+E+ TL Sbjct: 302 EREGYETNEIYLGGMSSSLPVDVQEEMIRNVKGFENAKVMRYAYAIEYDYVPPEEIKYTL 361 Query: 356 ETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDL 415 E++ + LFLAGQINGT+GYEEA AQGL+AGIN+ RK + I R DSYIG +IDDL Sbjct: 362 ESRTVENLFLAGQINGTSGYEEAGAQGLMAGINAVRKLRNEEAIILDRADSYIGTLIDDL 421 Query: 416 TSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLR 475 SKG EPYRMFT+R+EYR+ LR DNAD RL+ +G +LG I E +R K ++ + Sbjct: 422 VSKGTNEPYRMFTARSEYRLYLREDNADLRLSKLGYELGLIPEEEYQRVEKKRRDVELIT 481 Query: 476 SLLKSLVLTSKNLSSTSISFK------QDGKTRTAYEFLSYPDFSIQNLFSICP-----D 524 +L + NL K +DG T E L P+ + +++ I D Sbjct: 482 EILTKTNVGPSNLRVNETLLKRGENPIKDGS--TLLELLRRPEVTFEDIVYISEEIKGVD 539 Query: 525 ARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKL 584 + + +++I Y Y R + ++ K E + IP D DY +L + E K+KL Sbjct: 540 LKGYDHDTSYQVEITVKYQGYINRALKMIEKHKSMENKKIPADIDYDALKTIPKEAKDKL 599 Query: 585 SILKPFNLLQASKIEGMTPAALNLLLIYIK 614 +KP N+ QAS+I G++PA + +LIY+K Sbjct: 600 KRIKPINIGQASRISGVSPADIQAILIYLK 629 >gi|145218829|ref|YP_001129538.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prosthecochloris vibrioformis DSM 265] gi|189039351|sp|A4SC27|MNMG_PROVI RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|145204993|gb|ABP36036.1| glucose inhibited division protein A [Chlorobium phaeovibrioides DSM 265] Length = 621 Score = 516 bits (1330), Expect = e-144, Method: Compositional matrix adjust. Identities = 274/621 (44%), Positives = 388/621 (62%), Gaps = 12/621 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IV G GHAGCEAA AA+ G+S LI+ + + MSCNPAIGG+ KG + REIDAL Sbjct: 2 YDIIVAGAGHAGCEAALAAARSGSSCLLISSDLTAVARMSCNPAIGGVAKGQITREIDAL 61 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + DA GIQFR+LN+ KGPA+ PR QADR Y M+R + ++ NLD++Q V Sbjct: 62 GGEMAKAIDATGIQFRMLNLSKGPAMHSPRAQADRTAYTEYMKRVLEAETNLDLLQDTVT 121 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGR-MGDSPSNSLFN 184 G + +Q ++R +LT GTFL G+IHIG P GR + + P L Sbjct: 122 GIEVRGGQFFGVELQSGRILRAGAAILTCGTFLNGLIHIGMNHFPGGRTIAEPPVTGLTE 181 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGIT 243 S + F T RLKTGTP R+D ++I + +Q DE PFSF + I + QI C +T Sbjct: 182 SLVAAGFTTARLKTGTPPRVDRRSIDYSIVIEQKGDENPPPFSFSSGSIAGKEQISCFLT 241 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 +T +TH I+ S ++SG ++ GPRYCPSIEDKI RF ER+ H IFLEPEG +T+ Sbjct: 242 KTTHKTHEILRTGFDRSPLFSGKVQGVGPRYCPSIEDKIHRFTERDSHHIFLEPEGFHTN 301 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y NG ST+LPE+IQ +++IPG+E+V +IRPGYAIEYDY +P ++ +LETK + L Sbjct: 302 EMYVNGFSTSLPEDIQIAGLQSIPGMEEVKMIRPGYAIEYDYFHPSQIRRSLETKAVENL 361 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGT+GYEEAAAQGL+AGIN++RK +L I R+D+YIGV+IDDL +K EP Sbjct: 362 YFAGQINGTSGYEEAAAQGLMAGINASRKLKELPPIHLQRSDAYIGVLIDDLVTKETNEP 421 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTS AE+R+ LR DNAD RL G G + + + E + + L+S + Sbjct: 422 YRMFTSSAEHRLILRHDNADLRLRKFGHTAGLVDDDTYRETLSKDDEIVRMTAFLRSKTI 481 Query: 484 TSK---NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPD----ARKFSS--LVIE 534 + NL + G + A L P ++ LF+ PD AR SS LV E Sbjct: 482 PTTALYNLLPAESNRPMTGGQKAA-SALKRPGITLNRLFAALPDFAKEARLISSNPLVHE 540 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I +Y Y R++++ +++ E ++P+ F+Y S+ LS+E +EKL +P L Q Sbjct: 541 QVEINLAYEGYLKRELLQTEKVARLESLILPETFNYHSVTGLSSEGREKLLHFRPETLGQ 600 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G++P+ +++L++ + + Sbjct: 601 ASRIMGVSPSDISVLMVRLGR 621 >gi|297585587|ref|YP_003701367.1| glucose inhibited division protein A [Bacillus selenitireducens MLS10] gi|297144044|gb|ADI00802.1| glucose inhibited division protein A [Bacillus selenitireducens MLS10] Length = 628 Score = 516 bits (1330), Expect = e-144, Method: Compositional matrix adjust. Identities = 264/619 (42%), Positives = 398/619 (64%), Gaps = 7/619 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+G GHAG EA +A++GA+T ++T + M CNP++GG KG +VREIDAL Sbjct: 8 FDVIVVGAGHAGVEAGLASARMGANTLMLTLNLDAVAFMPCNPSVGGPAKGIVVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M R D IQ R+LN KGPAVR R QAD+ +Y+ M++ I +NL + QG V Sbjct: 68 GGEMARNIDKTHIQMRMLNTGKGPAVRALRAQADKFMYQHEMKKVIEDTDNLLLRQGMVE 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + ++ Q + +V++TTGT+LRG + IG+L +G PS +L + Sbjct: 128 ELIVEDDQVKGVITQTGARYEADSVIITTGTYLRGKVIIGELSYESGPNNMQPSVNLSHH 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + F+ R KTGTP R++G +I + +TE Q DE FS+ T Q+ C +T T Sbjct: 188 MKELGFEMVRFKTGTPPRVNGHSIDYSQTEIQPGDEEPRAFSYETTAFITDQLPCWLTYT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 + ETH +I N+ S +YSG I+ GPRYCPSIEDKIVRF ++ HQIFLEPEG NT V Sbjct: 248 SPETHELINANLHRSPMYSGMIEGTGPRYCPSIEDKIVRFNDKPRHQIFLEPEGRNTQEV 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+ST+LPE++QH+ ++T+PGLE V ++RPGYAIEYD I P +L+P+LETK+ISGLF Sbjct: 308 YVQGLSTSLPEDVQHEILKTVPGLESVRMMRPGYAIEYDAIVPTQLWPSLETKRISGLFT 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGT+GYEEAA QGL+AGIN+A K + + + R+++YIGV+IDDL +KG EPYR Sbjct: 368 AGQINGTSGYEEAAGQGLMAGINAALKVQEKEPLILDRSEAYIGVLIDDLVTKGTNEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR----QKRFAKYIQEYNFLR-SLLKS 480 + TSRAE+R+ LR DNAD RLT G ++G + + R +++ A+ +E LR +++K+ Sbjct: 428 LLTSRAEFRLLLRHDNADLRLTEKGYEIGLVNQNRFEGFEQKKAEIAKEIKRLRKAIIKA 487 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 ++ L S ++ +A + P+ S + ++ P + V E+++I+ Sbjct: 488 TPENNQVLEDLGASPLKEAM--SADVLIKRPELSYSLVDALVPAETVLTDDVKEQVEIQI 545 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y +Q+ + + E R IP+D DY S+ L+ E ++KL+ ++P ++ QAS++ G Sbjct: 546 KYEGYIAKQLEQVERSLKMENRKIPEDIDYLSINGLAIEARQKLNEVRPISVGQASRVSG 605 Query: 601 MTPAALNLLLIYIKKNTVK 619 + P+ +++LL+Y+++ ++ Sbjct: 606 VNPSDISVLLVYLEQGRLQ 624 >gi|294784742|ref|ZP_06750030.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Fusobacterium sp. 3_1_27] gi|294486456|gb|EFG33818.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Fusobacterium sp. 3_1_27] Length = 633 Score = 516 bits (1330), Expect = e-144, Method: Compositional matrix adjust. Identities = 275/630 (43%), Positives = 381/630 (60%), Gaps = 21/630 (3%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +D+IV+G GHAGCEAA +A++G TA+ T TIG MSCNP++GG K HL REID Sbjct: 2 QEFDIIVVGAGHAGCEAALASARMGMKTAIFTISLDTIGVMSCNPSLGGPAKSHLAREID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G MGR D IQ RVLN +KGPAVR R QAD+ Y M++ + ENL VIQG Sbjct: 62 ALGGEMGRNIDKTFIQIRVLNTRKGPAVRSLRAQADKMAYANEMKKTLEHTENLSVIQGM 121 Query: 124 VAGFNTE----KNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 V+ E K +I I +++ R V++ TGTFLRG+IHIG++ AGRMG+ S Sbjct: 122 VSELVVEEENGKKVIKGIKIREGLEYRAKAVIIATGTFLRGLIHIGEINFSAGRMGELSS 181 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADE-RLIPFSFMT---DKITN 235 L S K GR KTGTP R+DG+TI + E+Q D+ +++ FS T D + Sbjct: 182 EDLPLSLEKIGLKLGRFKTGTPTRIDGRTIDYSVLEEQPGDKSQVLKFSNRTKDEDALNR 241 Query: 236 RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFL 295 RQI C I TN + H II + S +++G I+ GPRYCPSIEDKI R+ ++N H +FL Sbjct: 242 RQIPCYIAHTNEKVHEIIRNAKERSPLFNGTIQGLGPRYCPSIEDKIFRYPDKNQHHLFL 301 Query: 296 EPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTL 355 E EG +T+ +Y G+S++LP ++Q + ++ I G E I+R YAIEYDY+ P+E+ TL Sbjct: 302 EREGYDTNEIYLGGLSSSLPVDVQEEMLKNIKGFENAKIMRYAYAIEYDYVPPEEIKYTL 361 Query: 356 ETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDL 415 E++ + LFLAGQINGT+GYEEA AQGL+AGIN+ RK + + R DSYIG +IDDL Sbjct: 362 ESRTVENLFLAGQINGTSGYEEAGAQGLMAGINAVRKLRNEEPVILDRADSYIGTLIDDL 421 Query: 416 TSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLR 475 SKG EPYRMFT+R+EYR+ LR DNAD RLT +G +LG + E +R K ++ + Sbjct: 422 VSKGTNEPYRMFTARSEYRLYLREDNADLRLTKLGYELGLVPEEEYQRVEKKRKDVKIIT 481 Query: 476 SLLKSLVLTSKNLSSTSISFK------QDGKTRTAYEFLSYPDFSIQNLFSICP-----D 524 +L + N I K +DG T E L P+ + +++ I D Sbjct: 482 EILAKTNVGPSNPRVNEILLKRGENPIKDGS--TLLELLRRPEVTFEDIKYISEEIKGLD 539 Query: 525 ARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKL 584 + + +++I Y Y R + ++ K E + IP D DY L + E K+KL Sbjct: 540 LQDYDHDTTYQVEITVKYEGYINRALKMIEKHKSMENKKIPADIDYDDLKTIPKEAKDKL 599 Query: 585 SILKPFNLLQASKIEGMTPAALNLLLIYIK 614 +KP N+ QAS+I G++PA + +LIY+K Sbjct: 600 KRIKPINIGQASRISGVSPADIQAILIYLK 629 >gi|310830136|ref|YP_003962493.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Eubacterium limosum KIST612] gi|308741870|gb|ADO39530.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Eubacterium limosum KIST612] Length = 633 Score = 516 bits (1330), Expect = e-144, Method: Compositional matrix adjust. Identities = 280/617 (45%), Positives = 402/617 (65%), Gaps = 7/617 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 S+DV+VIG GHAG EAA AA+LG T L+T ++ M CNP+IGG GKGHLVREIDA Sbjct: 7 SFDVVVIGAGHAGAEAALAAARLGFETLLLTINLDSVAMMPCNPSIGGTGKGHLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ DA IQ R+LN KGPAV R QAD++ Y+ M+ I +QE+L + Q E Sbjct: 67 LGGEMGKNIDATMIQCRMLNTGKGPAVHSLRAQADKKAYQFRMKEVIENQEHLLLKQQEA 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E I+ + +Q ++ +C + V+ TGT+L+G I IG+++ G G P+ L + Sbjct: 127 TRIIVEDGRITGVEVQTGAVYQCKSCVICTGTYLKGKIFIGEVQYDGGPNGLFPAMQLSD 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S ++ + R KTGTPAR+D KT+ + K + Q DE+++PFSF T+KI Q+ C +T Sbjct: 187 SLLEQGIELQRFKTGTPARVDAKTVDYSKMQVQNGDEKIVPFSFETEKIEIDQVPCYLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN ETHRII EN++ S +Y+GD+ GPRYCPSIE K++RF ++ HQIF+EPEGL+T+ Sbjct: 247 TNEETHRIINENMERSPLYTGDVVGVGPRYCPSIETKVMRFADKPQHQIFMEPEGLHTNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+S+ LPE++Q RT+PG+EKV +R YAIEYD I P L +LE+K I GLF Sbjct: 307 VYVQGMSSCLPEDVQIALYRTVPGMEKVEFMRSAYAIEYDCIYPTRLKASLESKDIKGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 GQINGT+GYEEAAAQGL+AG+N+ R + + R+ +YIGV+IDD+ +KG EPY Sbjct: 367 FGGQINGTSGYEEAAAQGLIAGVNAVRCIEGKEPVILDRSQAYIGVLIDDIITKGTEEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR-----QKRFAKYIQEYNFLRSLLK 479 RM TSR+EYR+ LR DNAD RLTPIG ++G I + R K+ A ++ R ++K Sbjct: 427 RMMTSRSEYRLLLRQDNADLRLTPIGHEIGLISDERYTAFLHKKAAVEQEKERLTRLMIK 486 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 T+K L S + G T E + P+ N ++ P+ S V E+++++ Sbjct: 487 PGEHTNKVLEGIGSSPIKSGVTLA--ELIRRPEVGYANTAALDPERPVLSDAVCEQVEVQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y +Q+ + ++ K EK+LIP++ DY+++ L E EKL+ ++P ++ QAS+I Sbjct: 545 IKYDGYIKKQVAQVEQFKKMEKKLIPENIDYTAIGGLRLEAVEKLTDIQPKSMGQASRIS 604 Query: 600 GMTPAALNLLLIYIKKN 616 G++PA L++LLIY+++N Sbjct: 605 GVSPADLSVLLIYLEQN 621 >gi|71020637|ref|XP_760549.1| hypothetical protein UM04402.1 [Ustilago maydis 521] gi|46100437|gb|EAK85670.1| hypothetical protein UM04402.1 [Ustilago maydis 521] Length = 710 Score = 516 bits (1329), Expect = e-144, Method: Compositional matrix adjust. Identities = 274/652 (42%), Positives = 378/652 (57%), Gaps = 47/652 (7%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DV+++G GHAGCEAAA +A+ GA T L+T +IG +SCNP++GG+GKG LVRE+DAL Sbjct: 46 FDVVIVGAGHAGCEAAAGSARTGARTLLVTTNKHSIGELSCNPSLGGVGKGTLVREVDAL 105 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GL G + D AGIQFR+LN KGPAV GPR Q DR LYR MQ + NL + + +V Sbjct: 106 GGLCGIIGDRAGIQFRMLNKSKGPAVHGPRAQIDRSLYRQHMQEALRQYPNLTISEAKVH 165 Query: 126 GFNTE------------------KNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKL 167 G + K ++ IV + I CS V+L TGTFL IH+G Sbjct: 166 GLQLDWSNRASSHHGNQGEGEKAKAVVRGIVTTNGDSISCSQVILATGTFLSADIHLGLE 225 Query: 168 KIPAGRM-------GDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTI----IWD---- 212 AGRM D S+ L S + F GRLKTGTPAR+ ++ W Sbjct: 226 SRSAGRMLPLPSINDDPASDGLSQSLARAGFKLGRLKTGTPARIAASSVRLGSPWQIGSK 285 Query: 213 ---KTEKQFADERLIPFSFMTDK---ITNRQIECGITRTNLETHRIIMENIKHSAIYSGD 266 + E D FSF+ D RQ+EC T T TH I+ +N+ S Sbjct: 286 VDPRLEVIHGDAAPAAFSFLHDAPDIAPARQVECWGTHTTPLTHEIVRQNLDKSIHIKET 345 Query: 267 IKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL----NTDVVYPNGISTALPEEIQHQF 322 ++ GPRYCPSIE K++RF E+ H ++LEPEGL + V+YPNG+S LP E Q + Sbjct: 346 VR--GPRYCPSIESKVIRFKEKQAHPVWLEPEGLPGTNDGSVLYPNGLSCTLPSEQQVEL 403 Query: 323 IRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQG 382 +R+IPGLE +IR GY +EYD+++P+EL +LETK+I GL+LAGQINGTTGYEEAAAQG Sbjct: 404 LRSIPGLECAEMIRAGYGVEYDHVDPRELRHSLETKRIEGLWLAGQINGTTGYEEAAAQG 463 Query: 383 LVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNA 442 VAG+N+ K N LD + R+ YIG MIDDL +GV EPYRMF+SR+EYR++LR DNA Sbjct: 464 CVAGLNAGLKVNGLDPLSIGRSGGYIGTMIDDLVMQGVEEPYRMFSSRSEYRMTLRADNA 523 Query: 443 DNRLTPI--GMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGK 500 D RLTP+ +GE+R +RF + + +LLK+ ++ D Sbjct: 524 DKRLTPLLRAAYSAAVGEQRWQRFCATQADMDQALALLKANRMSPHGWMKHGFHCSGDSH 583 Query: 501 TRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEE 560 R+ + L P I++L + P ++V++R++IE+ Y + RQ E + E Sbjct: 584 ERSGLDMLKQPRLGIRDLIPVIPALANLGTMVMDRVEIEAKYMPHLERQAQEIEAFNKET 643 Query: 561 KRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIY 612 + P+ F++ S+P L+++L+EKL +L+P +L I G TP+ L Y Sbjct: 644 QLRFPEGFNFGSVPGLNSQLREKLELLRPTSLAALKSIPGCTPSNYATLWRY 695 >gi|284007082|emb|CBA72357.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme (glucose-inhibited division protein A) [Arsenophonus nasoniae] Length = 607 Score = 516 bits (1329), Expect = e-144, Method: Compositional matrix adjust. Identities = 273/603 (45%), Positives = 379/603 (62%), Gaps = 13/603 (2%) Query: 23 VAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRV 82 AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDAL G+M D AGIQFR Sbjct: 2 AAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDALGGIMAIATDKAGIQFRT 61 Query: 83 LNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDN 142 LN KGPAV+ R Q DR LY+ A++ + +Q NL + Q V E + I ++ + Sbjct: 62 LNASKGPAVQATRAQTDRVLYKQAIRTALENQNNLMIFQQAVEDLIVENDQIIGVITKMG 121 Query: 143 SMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPA 202 +VVLT GTFL G IHIG GR GD P+ L + + RLKTGTP Sbjct: 122 LKFHTKSVVLTVGTFLDGKIHIGLENYSGGRAGDPPAIGLSHRLRELPLRVDRLKTGTPP 181 Query: 203 RLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQIECGITRTNLETHRIIMENIKHSA 261 R+D +TI + + QF D+ FSF+ + + +Q+ C IT TN +TH++I +N+ S Sbjct: 182 RIDARTIDFSQLVPQFGDDPTPIFSFIGSAEQHPKQLPCYITYTNEKTHQVIRDNLDRSP 241 Query: 262 IYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQ 321 +Y+G I+ GPRYCPSIEDK++RF +R+ HQIFLEPEGL ++ +YPNGIST+LP ++Q Q Sbjct: 242 MYAGIIEGIGPRYCPSIEDKVMRFADRSAHQIFLEPEGLTSNEIYPNGISTSLPFDVQMQ 301 Query: 322 FIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQ 381 I ++ GLE IIRPGYAIEYD+ +P++L PTLE+K I GLF AGQINGTTGYEEA AQ Sbjct: 302 IIHSMKGLENARIIRPGYAIEYDFFDPRDLKPTLESKFIKGLFFAGQINGTTGYEEAGAQ 361 Query: 382 GLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDN 441 GL+AG+N+AR + + + R +YIGV++DDL + G EPYRMFTSRAEYR+ LR DN Sbjct: 362 GLLAGLNAARYAFEQEGWFPRRDQAYIGVLVDDLCTLGTKEPYRMFTSRAEYRLMLREDN 421 Query: 442 ADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKN--------LSSTSI 493 AD RLT G +LG I E R ++F + ++ R L++L L + + + + Sbjct: 422 ADLRLTEKGYELGLIDENRWQKFCRKVELIEQERQRLRNLWLHPNSDKINDLNQVLAVPL 481 Query: 494 SFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEA 553 S + +G+ +SY + FS D + V +++I+ Y Y RQ E Sbjct: 482 SKESNGEDLLRRPEMSYKLLTSLKYFSPAIDDPQ----VTNQVEIQVKYEGYIIRQQEEI 537 Query: 554 KEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYI 613 + E +P + DY + LSNE+ KL+ KP ++ QAS+I G+TPAA+++LL+++ Sbjct: 538 ERQLRNENTTLPTNLDYKQITGLSNEVIAKLNDHKPSSIGQASRISGITPAAISILLVWL 597 Query: 614 KKN 616 KK Sbjct: 598 KKQ 600 >gi|70984234|ref|XP_747634.1| mitochondrial translation optimization protein (Mto1) [Aspergillus fumigatus Af293] gi|66845261|gb|EAL85596.1| mitochondrial translation optimization protein (Mto1), putative [Aspergillus fumigatus Af293] Length = 693 Score = 516 bits (1329), Expect = e-144, Method: Compositional matrix adjust. Identities = 281/634 (44%), Positives = 390/634 (61%), Gaps = 23/634 (3%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 R+YDV+VIGGGHAG EA+A AA+ GA TAL+T S IG SCNP+ GG+GKG ++REI Sbjct: 35 TRAYDVVVIGGGHAGSEASAAAARSGARTALVTPSLSNIGVCSCNPSFGGIGKGTMIREI 94 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DA+DG+ GR+ D AGI FR+LN KGPAV GPR Q DR+LY+ MQ E+L+ E L +++G Sbjct: 95 DAMDGVAGRIIDKAGIMFRILNRSKGPAVWGPRAQIDRDLYKRYMQEELLATEGLSIVEG 154 Query: 123 EVAGFNTEK----NI------ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAG 172 +VA K NI I + ++ +I VV+TTGTFL G IHIG P+G Sbjct: 155 KVADIVVSKEGVENIPGSQGKIVGVRLESGEVIPTGRVVITTGTFLGGEIHIGLEAYPSG 214 Query: 173 RMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK 232 RMG++ + L S + F GRLKTGTP RLD KTI + E Q D PFS++ Sbjct: 215 RMGEAATFGLSKSLREAGFQLGRLKTGTPPRLDMKTIDFAPLEVQRGDSPPQPFSYLNTT 274 Query: 233 IT---NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERN 289 + Q+ C +T TN +H I+ N+ S ++ GPRYCPS+E KI+RF ++ Sbjct: 275 VDVGDEGQLTCWMTHTNEASHEIVRANLDKSIHIRETVR--GPRYCPSLESKIIRFTDKK 332 Query: 290 GHQIFLEPEGLN-TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINP 348 HQI+LEPEG +V+YPNGIS +P + Q+ +RT+ GLE V +++PGY +EYDYI+P Sbjct: 333 QHQIWLEPEGFAPNEVIYPNGISMTIPADAQYALLRTVRGLENVRMLQPGYGVEYDYIDP 392 Query: 349 KELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYI 408 + L PTLETK ISGL+LAGQINGTTGYEEAA QG++AG N+ + + +R+D +I Sbjct: 393 RNLRPTLETKLISGLYLAGQINGTTGYEEAAGQGIIAGTNAGLSAQGRQPLTLTRSDGFI 452 Query: 409 GVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYI 468 G+MIDDL +KGV EPYRMFT+R+EYRIS R DNAD RLT + G + ++R + F Sbjct: 453 GIMIDDLITKGVSEPYRMFTARSEYRISTRSDNADLRLTRMARDAGVVSDKRWRSFTDTE 512 Query: 469 QEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLF-------SI 521 + L++LL L+S S + D R+A + L I L + Sbjct: 513 AQIKELQNLLAKTKLSSTMWSRKGFKTRTDSSVRSALDLLCLDGVDIDALIPHIESPSGM 572 Query: 522 CPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELK 581 F ++ R+ IE YA Y RQ A++ +E ++P D DYS + +S E + Sbjct: 573 AYTPSSFDPIIRTRVSIEGRYAPYVKRQEAMARKFLQDESLILPPDLDYSKVQGISTEER 632 Query: 582 EKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 + L ++P ++ A +IEG+TPA LL+++++ Sbjct: 633 QALERVRPVSVGMARRIEGVTPAGALRLLMHVRR 666 >gi|124026850|ref|YP_001015965.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prochlorococcus marinus str. NATL1A] gi|166222716|sp|A2C5E1|MNMG_PROM1 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|123961918|gb|ABM76701.1| Glucose inhibited division protein A [Prochlorococcus marinus str. NATL1A] Length = 656 Score = 516 bits (1329), Expect = e-144, Method: Compositional matrix adjust. Identities = 281/639 (43%), Positives = 383/639 (59%), Gaps = 24/639 (3%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 N S+DVIV+GGGHAGCEAA +A+LG +TAL T I CNPA+GG K LV E+ Sbjct: 8 NESFDVIVVGGGHAGCEAALTSARLGLNTALFTLNLDRIAWQPCNPAVGGPAKSQLVHEV 67 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G++G++AD +Q RVLN +GPAVR R Q D+ Y M + + + NL + + Sbjct: 68 DALGGIIGKLADLTALQKRVLNASRGPAVRALRAQTDKRSYAHEMLKILQNTPNLKIREA 127 Query: 123 EVAGFNTEK----------------NIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGK 166 V G E I I S+ VVLTTGTFL G I IG Sbjct: 128 MVTGLEIEHYPNQIDQKTPEIQERIGFIKGIKTYFGSVFHAKAVVLTTGTFLGGRIWIGN 187 Query: 167 LKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFAD--ERLI 224 + AGR G+ S L K F T RLKTGTPAR+D +TI D ++Q +D ++ Sbjct: 188 QSMSAGRAGEQASEGLTEELKKLGFTTDRLKTGTPARVDRRTIDLDSLDEQLSDASDKFF 247 Query: 225 PFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVR 284 F ++ K + Q+ C ITRT ETH++I N+ + IY G I S GPRYCPSIEDKIVR Sbjct: 248 SFDPLSWK-SGEQMSCHITRTTKETHQLIKNNLHLTPIYGGFIDSKGPRYCPSIEDKIVR 306 Query: 285 FGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYD 344 F +++ HQIFLEPEG +T +Y G ST LPE +Q + +RT+PGL+ ++RP YA+EYD Sbjct: 307 FADKDSHQIFLEPEGRDTPEMYVQGFSTGLPENLQLELLRTLPGLQNCVMLRPAYAVEYD 366 Query: 345 YINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 YI +L TLETK+ISGL+ AGQ+NGTTGYEEAAAQGLVAG+N+AR N + I F R Sbjct: 367 YIPATQLEATLETKRISGLYSAGQLNGTTGYEEAAAQGLVAGLNAARLVNNKEGIIFERE 426 Query: 405 DSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF 464 SYIG MIDDL +K + EPYR+ TSR+EYR+ LR DNAD RLTP+G +LG I ERR F Sbjct: 427 SSYIGTMIDDLVTKDLKEPYRVLTSRSEYRLILRGDNADRRLTPLGYQLGLIDERRWNIF 486 Query: 465 AKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGK----TRTAYEFLSYPDFSIQNLFS 520 Q N + L + + + I F G + T FL + ++L + Sbjct: 487 NAKQQLINQEKERLDKERIKESDKCAKEI-FSSTGTPIKGSLTLANFLRRTNIHYKDLIT 545 Query: 521 ICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNEL 580 + V E ++I+ Y+ Y RQ + ++K + K+L+PK+ +Y+++ LS E Sbjct: 546 YNLTTQSIPLDVEEAVEIDIKYSGYLERQKAQINQLKQQSKKLLPKNLNYNNIETLSKEA 605 Query: 581 KEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 +EKL+I +P +L A+++ G++ A L LL+++K +K Sbjct: 606 REKLTISQPKSLGHAAQVPGVSKADLTALLVWLKIEKMK 644 >gi|195585718|ref|XP_002082627.1| GD11675 [Drosophila simulans] gi|194194636|gb|EDX08212.1| GD11675 [Drosophila simulans] Length = 661 Score = 516 bits (1329), Expect = e-144, Method: Compositional matrix adjust. Identities = 281/636 (44%), Positives = 414/636 (65%), Gaps = 31/636 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+VIGGGHAG EA+A AA++G+ T L+THK TIG MSCNP+ GG+GKGHL+RE+DAL Sbjct: 31 YDVVVIGGGHAGTEASAAAARMGSRTLLLTHKLETIGEMSCNPSFGGIGKGHLMREVDAL 90 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DG+ R D +G+ ++VLN ++GPAV GPR Q DR+LY+ A+Q+E+ S NL++ V Sbjct: 91 DGVCARCCDVSGVHYKVLNRRRGPAVWGPRAQIDRQLYKKAVQQELHSTPNLEIRAAAVD 150 Query: 126 GF------NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 +T+ +++ + ++R +VVLTTGTFLR I+IG PAGR+GD+P+ Sbjct: 151 NLLIEDEQDTQARRCCGVLLANGEVVRSRSVVLTTGTFLRAHINIGLEVRPAGRIGDAPA 210 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI---TNR 236 +L + + F GRLKTGTP R+ ++ + + ++ D+ +PFSF+ + Sbjct: 211 KALGEAIDRLGFRMGRLKTGTPPRIAKASVDFSQLQRHDGDDPPMPFSFLNKDVWLPAKD 270 Query: 237 QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLE 296 Q+ C +T T + I+ +N+ + + +I GPRYCPSIE KI+RFG + HQ++LE Sbjct: 271 QLPCYLTYTTPKVSDIVRDNLHVNRHVTEEIT--GPRYCPSIESKILRFGAKV-HQVWLE 327 Query: 297 PEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLE 356 PEGL++++VYP GIS LP + Q + + I GLEK +++PGY +EYD+I+P+EL+PTLE Sbjct: 328 PEGLDSNLVYPQGISCTLPHDQQVELVHAIQGLEKAVVVQPGYGVEYDFIDPRELYPTLE 387 Query: 357 TKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDC--ICFSRTDSYIGVMIDD 414 TK++ GLF AGQINGTTGYEEAAAQG++AG N+A K+ +D + SRT+ YIGV+IDD Sbjct: 388 TKRVPGLFFAGQINGTTGYEEAAAQGIIAGANAAGKTKHIDGRQLTISRTEGYIGVLIDD 447 Query: 415 LTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF----AKYIQE 470 LTS G EPYRMFTSRAE+R+SLRPDNAD RLT G + G + R + F A+ Sbjct: 448 LTSLGTNEPYRMFTSRAEFRLSLRPDNADMRLTQKGYEFGLVSSDRYQHFQQTEARLQSA 507 Query: 471 YNFLRSLLKSLVLTSK--NLSSTSISFKQDGKTRTAYEFLSYP--DFSIQNLFSICPDAR 526 + LR L K + NL S + +TA++ L P + +I+ L + P+ Sbjct: 508 TDSLRRLRKHTHYWRQALNLPKAKASVE-----KTAFDMLGIPADNITIEKLIQLHPNEL 562 Query: 527 KF---SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDY-SSLPALSNELKE 582 + + ERL+IE+ Y+ + Q + ++++ EE+ IP D DY S +LSNE ++ Sbjct: 563 SWLKGDRNLAERLKIEALYSFFVDEQQRDVEDVRREERLSIPADIDYFSKSLSLSNEERQ 622 Query: 583 KLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTV 618 KL++++P + AS+I+G+TP+ + +L Y+KK V Sbjct: 623 KLTLIQPQTIAAASRIQGVTPSTIVRILKYVKKAEV 658 >gi|269118889|ref|YP_003307066.1| glucose inhibited division protein A [Sebaldella termitidis ATCC 33386] gi|268612767|gb|ACZ07135.1| glucose inhibited division protein A [Sebaldella termitidis ATCC 33386] Length = 628 Score = 516 bits (1329), Expect = e-144, Method: Compositional matrix adjust. Identities = 273/626 (43%), Positives = 390/626 (62%), Gaps = 18/626 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R YDVIV+G GHAGCEAA +A+LG TA+ T IG MSCNP++GG K HLV+EID Sbjct: 2 RDYDVIVVGAGHAGCEAALASARLGMKTAIFTITLDNIGMMSCNPSLGGPAKSHLVKEID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D + IQ R+LN KKGPAVR R QADR++Y M++ + +QENLD+IQ Sbjct: 62 ALGGEMACNMDKSFIQMRILNTKKGPAVRSLRAQADRKVYSREMKKTVENQENLDIIQDI 121 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V TE ++ I + V+L TGTFL+G++HIG KI GRMG+ S L Sbjct: 122 VTELKTENGKVTGISTKTGLEFTAKVVILATGTFLKGLMHIGDRKIKGGRMGELSSEELS 181 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFAD-ERLIPFSFMT---DKITNRQIE 239 +S K GR KTGTP R+D +TI D E+Q + E+L+ FS T D +Q+ Sbjct: 182 DSLAKEGLKIGRFKTGTPPRVDIRTINLDILEEQPGETEKLLKFSARTKDEDIKGRKQLS 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +TRT H II+ N+ + +Y+G I S GPRYCPSIEDK+V+F E++ H +FLEPEG Sbjct: 242 CYLTRTTPNIHSIILSNLDKAPMYNGSIDSTGPRYCPSIEDKVVKFSEKDSHHLFLEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 +T VY +G+ST+ P EIQ + + + GLE +I+R GYA+EYDY++P L TLE++ Sbjct: 302 FDTSEVYISGLSTSFPAEIQQKIVNNVIGLENAHIMRYGYAVEYDYVDPSGLKYTLESRA 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 + L+LAGQINGT+GYEEAAAQGLVAG+N+ +K + + R DSYIG MIDDL +K Sbjct: 362 VENLYLAGQINGTSGYEEAAAQGLVAGVNAVQKLKNKEPLILDRADSYIGTMIDDLINKE 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 ++EPYRMFT+R+EYR+ LR DNAD RL G K+G + E K+ + + +L+ Sbjct: 422 IMEPYRMFTARSEYRLILREDNADLRLAETGYKIGLVSEEEYKKTVHKRESVKKIIEILE 481 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEF--------LSYPDFS-IQNLFSICPDARKFSS 530 + L + N I K ++ ++Y D I + + PD + Sbjct: 482 NTKLGTSNGRLVEILDKYGDSLKSGTTLKETLRRPKVTYDDIKYIAGIMNDVPDL-SYDE 540 Query: 531 LVIERLQIESSYAAYTGR--QMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 + + +++ Y Y + Q+IE ++ + EEK +IP++FDY+ + ++ E K++L + Sbjct: 541 DIEYQTEVQVKYEGYIQKSYQIIE-RQKRLEEK-MIPENFDYNRMLGITREAKQRLGEKR 598 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIK 614 P N+ QAS+I G+TPA +++LL+Y++ Sbjct: 599 PHNIGQASRIVGVTPADVSVLLMYLE 624 >gi|291529194|emb|CBK94780.1| glucose-inhibited division protein A [Eubacterium rectale M104/1] Length = 646 Score = 516 bits (1329), Expect = e-144, Method: Compositional matrix adjust. Identities = 271/631 (42%), Positives = 385/631 (61%), Gaps = 26/631 (4%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + +YDV+V+G GHAGCEAA A+LG T + T +I M CNP IGG KGHLVR Sbjct: 5 FVEENYDVVVVGAGHAGCEAALACARLGLETIVFTVSVDSIALMPCNPNIGGSSKGHLVR 64 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G MG+ D IQ ++LN KGPAV R QAD+ Y + M++ + + ++L + Sbjct: 65 EIDALGGEMGKNIDKTFIQSKMLNKSKGPAVHSLRAQADKAEYSMEMRKTLQNTDHLTIR 124 Query: 121 QGEVAGFNT-EKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 QGEV+ T E N I ++ C +VL TGT+LR G++ G G + Sbjct: 125 QGEVSEIVTDENNNIVGAKTTSGALYHCKAIVLCTGTYLRARCLTGEMITHTGPNGLLAA 184 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KITNRQ 237 N L S + + R KTGTPAR+D +++ + K E+QF DER++PFSF TD + Q Sbjct: 185 NHLTQSLIDHGIEMRRFKTGTPARVDKRSLDFSKMEEQFGDERVVPFSFTTDPESVQIDQ 244 Query: 238 IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 + C +T TN +TH II N+ S IY+G I+ GPRYCPSIEDK+V+F E+ HQIF+EP Sbjct: 245 VSCWLTYTNNKTHEIIRNNLDRSPIYAGIIEGTGPRYCPSIEDKVVKFAEKERHQIFIEP 304 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EGLNT+ +Y G+S+++PE++Q++ RT+PGLE V I+R YAIEYD IN +L+ +LE Sbjct: 305 EGLNTNEMYVGGMSSSMPEDVQYEMYRTLPGLENVKIVRDAYAIEYDCINANQLYASLEF 364 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 KKI GLF GQ NG++GYEEAA QGL+AGIN+A K + R+++YIGV+IDDL + Sbjct: 365 KKIHGLFSGGQFNGSSGYEEAACQGLIAGINAAMKILGKKPLILDRSEAYIGVLIDDLVT 424 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL 477 K EPYRM TSRAEYR+ LR DNAD RLT G ++G I + R Y+++ Sbjct: 425 KKNREPYRMMTSRAEYRLLLRQDNADLRLTEKGYEVGLISKER----------YDYVCKK 474 Query: 478 LKSLVLTSKNLSSTSISFKQD-------------GKTRTAYEFLSYPDFSIQNLFSICPD 524 + + + +S +I + D T E + P+ L I PD Sbjct: 475 KELIDKEIERVSHVNIGARADVQEILKKYNSIELSNGTTLEELIRRPELDYDKLAPIDPD 534 Query: 525 ARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKL 584 K S + E++ I YA Y RQ+ + K EK+L+P DFDY+++ L E ++KL Sbjct: 535 RPKLSDDIREQINILIKYAGYISRQIKQVSHFKKLEKKLLPTDFDYNTISGLRIEAQQKL 594 Query: 585 SILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 + +P ++ QAS+I G+TPA +++LL+++++ Sbjct: 595 NEFQPLSIGQASRISGVTPADISVLLVFLEQ 625 >gi|226294752|gb|EEH50172.1| mitochondrial translation optimization protein [Paracoccidioides brasiliensis Pb18] Length = 695 Score = 516 bits (1329), Expect = e-144, Method: Compositional matrix adjust. Identities = 280/630 (44%), Positives = 389/630 (61%), Gaps = 21/630 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+VIGGGHAG EA A AA+LGA TAL+T S IG SCNP+IGG+GKG ++REIDAL Sbjct: 38 YDVVVIGGGHAGSEACAAAARLGARTALVTPSRSNIGVCSCNPSIGGIGKGTMIREIDAL 97 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGL G VAD AGIQFR+LN KG AV GPR Q DR LYR M ++ + L +++G+V Sbjct: 98 DGLAGDVADKAGIQFRILNRSKGEAVWGPRAQIDRILYRKHMLEKLSTTPGLSIVEGKVG 157 Query: 126 GFNTEKNIISS--------IVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 + +++ + ++ +I VV+TTGTFL G IHIG P+GRMG++ Sbjct: 158 DIILSREGLAAGSQGKIIGVRLESGEVIPTGRVVITTGTFLGGEIHIGLDVFPSGRMGEA 217 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--- 234 + L S + F GRLKTGTP R++ K+I + E D +PFS++ ++ Sbjct: 218 ATFGLSKSLREAGFQLGRLKTGTPPRIEKKSIDFSNLEVHPGDSPPVPFSYLNKRVAVND 277 Query: 235 NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 Q+ C T TN +H+I+ +N+ S +K GPRYCPS+E KI+RF ++ H ++ Sbjct: 278 EDQLPCWSTYTNEVSHQIVRDNLDKSVHIRETVK--GPRYCPSLESKIIRFKDKKRHIVW 335 Query: 295 LEPEGLN-TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFP 353 LEPEG +V+YPNGIS +P + Q +RTIPGLE ++++ GY +EYDY++P+ L P Sbjct: 336 LEPEGFAPNEVIYPNGISMTIPSDAQLALLRTIPGLENAHMLQAGYGVEYDYVDPRSLRP 395 Query: 354 TLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMID 413 TLETK ISGL+LAGQINGTTGYEEAA QG++AGIN+ S SR+D +IG+M+D Sbjct: 396 TLETKLISGLYLAGQINGTTGYEEAAGQGILAGINAGLASQSKPPFILSRSDGFIGIMVD 455 Query: 414 DLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNF 473 DL +KGV EPYRMFT+R+EYRIS R DNAD RLT G ++G +G+RR F++ + Sbjct: 456 DLITKGVSEPYRMFTARSEYRISTRSDNADLRLTARGREIGAVGDRRWNHFSQVEAQITE 515 Query: 474 LRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDAR------- 526 LR+LL++ S S D R+A++ L D SI ++ Sbjct: 516 LRTLLENTKFPSALWSRKGFGVHGDNNLRSAFDLLRLNDTSIDDIIPHIESGSGRTYTPL 575 Query: 527 KFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSI 586 F+S + R+ IE YA Y +A+ + +E L+P D DY + LS E + L Sbjct: 576 SFTSEIKHRVAIEGRYAPYIKIHADKARSFEKDESLLLPPDMDYGQVVGLSYEERAALER 635 Query: 587 LKPFNLLQASKIEGMTPAALNLLLIYIKKN 616 ++P N+ A +IEGMTP A LL+++++N Sbjct: 636 VRPENIGMARRIEGMTPVAALRLLVHVRRN 665 >gi|304439122|ref|ZP_07399041.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Peptoniphilus duerdenii ATCC BAA-1640] gi|304372481|gb|EFM26068.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Peptoniphilus duerdenii ATCC BAA-1640] Length = 633 Score = 516 bits (1329), Expect = e-144, Method: Compositional matrix adjust. Identities = 276/633 (43%), Positives = 399/633 (63%), Gaps = 19/633 (3%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 I YDVIV+G GHAG E+A AA++G T L+T +I +MSCNP +GG GKGHLVRE Sbjct: 8 IGGEYDVIVVGAGHAGTESALAAARMGRKTLLLTMNLDSIVAMSCNPNVGGTGKGHLVRE 67 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M R D IQ R+LN+ KGPAV R QAD+ Y M++ I ENLD+ Q Sbjct: 68 IDALGGEMARNIDRTFIQSRMLNLSKGPAVHSLRAQADKRRYHDEMKKVIEKTENLDLRQ 127 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 EV E + + ++ + ++ + +VV+ TGT+LRG I +G++ +G G PS Sbjct: 128 SEVVKILLEDSKVVGVLTKTGAIYKAKSVVVATGTYLRGRIFMGEVNYSSGPDGMKPSLD 187 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSF--MTDKITNRQIE 239 L S + R+KTGTPAR+ TI + K E Q DER++PFSF + ++ Q+ Sbjct: 188 LSESLKDMGLELIRMKTGTPARMLRSTIDFSKMEVQPGDERVVPFSFDNIDKDMSKDQVN 247 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +T T + H II ENI SA+Y GDI+ GPRYCPSIEDK++RF +R HQ+F+EPEG Sbjct: 248 CYLTYTTEKCHDIIRENIMRSAMYLGDIEGTGPRYCPSIEDKVMRFKDRTSHQVFIEPEG 307 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L+T+ +Y G+S++LPEE+Q + I GLE I+R YAIEYD I+ + +LE Sbjct: 308 LSTEEMYIQGVSSSLPEEVQIDIYKNIIGLENAKIMRSAYAIEYDAIDATVIDRSLEHMD 367 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 ISGLF AGQING++GYEEAAAQGL+AGIN+A K + + R+D+YIGV+IDDL +KG Sbjct: 368 ISGLFFAGQINGSSGYEEAAAQGLMAGINAALKVEGKEPLILERSDAYIGVLIDDLVTKG 427 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL-- 477 EPYRM T+RAEYR++LR DNAD RLT +G +G + + + +R+ Y +E N + L Sbjct: 428 TREPYRMMTARAEYRLTLRQDNADMRLTQMGYDIGLVTKEKYERYL-YRKE-NIEKELKR 485 Query: 478 LKSLVL--TSKN------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFS 529 +K + + T++N L +T I T++ E + P+ + + P + Sbjct: 486 IKKIKINPTAENNEILERLGTTPIK-----NTQSLEELIRRPELGYDAVKELDPQRPELR 540 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 +IE+++IE Y+ Y +Q I+ + K EKR + KD +Y + L NE +EKL+ ++P Sbjct: 541 RDIIEQVEIEIKYSGYIKKQNIQISQFKKLEKRYLEKDLNYEEVQGLRNEAREKLTKIRP 600 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKKNTVKLNE 622 ++ QA++I G++PA +N+LLIY+++ + N+ Sbjct: 601 ESIGQAARITGVSPADINVLLIYLERKRREKND 633 >gi|293398147|ref|ZP_06642352.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria gonorrhoeae F62] gi|291611410|gb|EFF40480.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria gonorrhoeae F62] Length = 655 Score = 516 bits (1329), Expect = e-144, Method: Compositional matrix adjust. Identities = 282/618 (45%), Positives = 385/618 (62%), Gaps = 6/618 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP++GG+GKGHLVRE+D Sbjct: 32 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSVGGIGKGHLVRELD 91 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY+ +++ + +QENLD+ Q Sbjct: 92 ALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKASIREMLENQENLDLFQQA 151 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E IS ++ + VVLT GTFL G IHIG GR GD + SL Sbjct: 152 VEDVTLEGERISGVITAMGVEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 211 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + GRLKTGTP R+DG+TI + + +Q D + S + ++ RQ+ C I Sbjct: 212 GRLRELKLPQGRLKTGTPPRIDGRTIDFSQLTEQPGDTPVPVMSVRGNAEMHPRQVSCWI 271 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEGL T Sbjct: 272 THTNTQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEGLTT 331 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK I G Sbjct: 332 HEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKTIEG 391 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AG N+ + D + R +Y+GV++DDL +KG+ E Sbjct: 392 LFFAGQINGTTGYEEAAAQGLLAGANAVQYVRGQDPLLLRREQAYLGVLVDDLITKGLNE 451 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + + LK+ Sbjct: 452 PYRMFTSRAEYRLQLREDNADMRLTEDGYKIGLVGEAQWRMFNEKREAVEREIQRLKTTW 511 Query: 483 LTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI--CPDARKFSSLVIERLQ 537 T + L+ + ++ + ++ L P+ L ++ + S+ VIE+++ Sbjct: 512 YTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGAMPSENLSAEVIEQVE 571 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ Y Y RQ E + E +P DY + LS E+++KL+ KP + QAS+ Sbjct: 572 IQVKYQGYIDRQNEEIDSRRDIETLKLPDGIDYGRVKGLSAEVQQKLNQHKPETVGQASR 631 Query: 598 IEGMTPAALNLLLIYIKK 615 I G+TP A+ LL++++K+ Sbjct: 632 ISGVTPTAVALLMVHLKR 649 >gi|73543039|ref|YP_297559.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ralstonia eutropha JMP134] gi|123623784|sp|Q46VW9|MNMG_RALEJ RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|72120452|gb|AAZ62715.1| Glucose-inhibited division protein A subfamily [Ralstonia eutropha JMP134] Length = 646 Score = 516 bits (1329), Expect = e-144, Method: Compositional matrix adjust. Identities = 285/627 (45%), Positives = 387/627 (61%), Gaps = 15/627 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNP+IGG+GKGHLV+E+D Sbjct: 5 KEFDVIVVGGGHAGTEAALAAARMGCQTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 A+ G M D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q Sbjct: 65 AMGGAMAAATDEAGIQFRILNSSKGPAVRATRAQADRVLYRKAIRTRLENQPNLMLFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + + V Q R VVLT GTFL G IH+G GR GD S SL Sbjct: 125 VDDLLVEGDRVVGAVTQVGIAFRARAVVLTAGTFLDGKIHVGLDNYTGGRAGDPASVSLS 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQIECG 241 + GRLKTGTP R+DG+TI + E+Q D +P FSF+ + +Q+ C Sbjct: 185 ARLKELKLPQGRLKTGTPPRIDGRTIDFSVMEEQPGDLDPVPVFSFLGRPEQHPQQLPCW 244 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 I+ TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL Sbjct: 245 ISHTNSRTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLT 304 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ YPNGIST+LP ++Q + + +I GLE +I+RPGYAIEYDY +P+ L +LE+K IS Sbjct: 305 TNEFYPNGISTSLPFDVQLELVHSIRGLENAHILRPGYAIEYDYFDPRALKASLESKAIS 364 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQINGTTGYEEAAAQGL+AGIN+ + D R +Y+GV++DDL ++GV Sbjct: 365 GLFFAGQINGTTGYEEAAAQGLLAGINAGCYVRERDAWTPRRDQAYLGVLVDDLITRGVT 424 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAE+R+SLR DNAD RLT +G +LG + + R F + + LKS Sbjct: 425 EPYRMFTSRAEFRLSLREDNADMRLTEVGRELGVVDDVRWDAFNRKRDAVSRETERLKST 484 Query: 482 VLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI-----CPDARKFSSLVI 533 + L + + K + + + L P+ +L ++ P+ ++ Sbjct: 485 WVNPTILPAEDAVPLLGKPIEREYSLADLLRRPEVVYNDLMALQGGRHAPEVPLDGDPLL 544 Query: 534 -----ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 E+++I Y Y RQ E +++ E +P+ DY+ + L E+ +KL+ + Sbjct: 545 MDQIREQIEIGVKYHGYIARQAAEVDKLEANESTRLPEGLDYTEVRGLGFEVSQKLNQHR 604 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIKK 615 P L QAS+I G+TPAA++LLL+++KK Sbjct: 605 PETLGQASRISGVTPAAISLLLVHLKK 631 >gi|223936053|ref|ZP_03627967.1| glucose-inhibited division protein A [bacterium Ellin514] gi|223895275|gb|EEF61722.1| glucose-inhibited division protein A [bacterium Ellin514] Length = 651 Score = 516 bits (1329), Expect = e-144, Method: Compositional matrix adjust. Identities = 282/641 (43%), Positives = 386/641 (60%), Gaps = 49/641 (7%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIV+G GHAG EAA AA++G T L+T TIG MSCNPAIGGL KGHL REID Sbjct: 6 KKYDVIVVGAGHAGVEAALAAARMGCQTLLLTINADTIGQMSCNPAIGGLAKGHLTREID 65 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G MG+ D G+QFR+LN KKGPAV PR Q D++ Y+ ++ + NLDV QG+ Sbjct: 66 ALGGEMGKATDMTGLQFRMLNTKKGPAVWAPRAQCDKKAYQFRLKWVCEREPNLDVKQGQ 125 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 + ++ + +TVV+TTGTFLRG++HIG+ + GR G+S + +L Sbjct: 126 TIKLVHQNGQVTGVETSLEVQYLSATVVITTGTFLRGLMHIGQNQQSGGRAGESAAMNLS 185 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI---------- 233 S + + GRLKTGTP RL ++I + KT +Q DE + F++ D + Sbjct: 186 ASLKEVGLELGRLKTGTPPRLLRRSIDFTKTAEQSGDEPIPFFTYWKDDLFHVEHSGVNP 245 Query: 234 ------------------TNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYC 275 N Q+ C IT T T +II ENI S +YSG I+ GPRYC Sbjct: 246 RDIGHSAGKYPPGSILDRLNGQLHCYITYTTDATAKIIRENIHKSPMYSGVIEGVGPRYC 305 Query: 276 PSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNII 335 PSIEDKIV+F E+ QIFLEPEG+ TD +Y NG ST LP E+Q Q ++TI G E I+ Sbjct: 306 PSIEDKIVKFPEKERQQIFLEPEGIATDEIYVNGFSTCLPYEVQVQMVQTIIGCENAEIL 365 Query: 336 RPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNK 395 RP YA+EYD+ P +L+P+LETK S LFLAGQINGT+GYEEA AQGL+AGIN+ARK Sbjct: 366 RPAYAVEYDFAFPTQLYPSLETKVCSHLFLAGQINGTSGYEEAGAQGLMAGINAARKVQG 425 Query: 396 LDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGC 455 + I R +YIGV+IDDL +KG +EPYRMFTSRAEYR+ LR DNAD RL+ G ++G Sbjct: 426 KEPIILRRDQAYIGVLIDDLVTKGTIEPYRMFTSRAEYRLILRQDNADLRLSETGHQIGL 485 Query: 456 IGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSI 515 + ER + K+ + + + + L T + T + L P + Sbjct: 486 LPER---NYIKFKAKREAIAAEIDRLEKTRQG-------------TDLLAQLLRRPQVTY 529 Query: 516 QNLFSICPDAR-KFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLP 574 Q+L P R S VI++++I Y Y RQ +E ++ K E + IP FDY ++ Sbjct: 530 QDL----PGKRTDLSEDVIQQVEIAIKYEGYIDRQELEVEKFKTLEDKQIPTAFDYDTVH 585 Query: 575 ALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 +L E ++KL ++P L QAS+I G++P+ + +L++++K+ Sbjct: 586 SLRTEARQKLKKIRPATLGQASRISGVSPSDIGILMVWLKR 626 >gi|317496584|ref|ZP_07954932.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Gemella moribillum M424] gi|316913291|gb|EFV34789.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Gemella moribillum M424] Length = 627 Score = 516 bits (1328), Expect = e-144, Method: Compositional matrix adjust. Identities = 269/615 (43%), Positives = 376/615 (61%), Gaps = 3/615 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIGGGHAG EAA A++ G T +IT TIG M CNP++GG KG +VRE+D Sbjct: 6 KEYDVIVIGGGHAGIEAAHAASRKGVKTLMITINLDTIGFMPCNPSVGGPAKGIVVREVD 65 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL GLMGRVAD IQ ++LN KGPAVR R Q+D+ Y+ M+R + NLD+ Q Sbjct: 66 ALGGLMGRVADKTNIQSKMLNTAKGPAVRALRMQSDKVAYQTEMKRILEGTPNLDIEQAM 125 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E N + + + + +++TTGT+LRG I IG +K +G PS L Sbjct: 126 VRELIIENNKVVGLKTMLGTAYKAKVIIITTGTYLRGEIVIGDVKYSSGPNHQMPSIDLA 185 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + FD R KTGTP R++ ++ + +T Q D FS+ T + QI C +T Sbjct: 186 KQLEELGFDLVRFKTGTPPRVNADSVDFSQTAIQPGDNEKYAFSYETTEYVEDQIPCWLT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG NT Sbjct: 246 YTNTTTHEIIDRNLGRSAMYSGVIKGTGPRYCPSIEDKYVRFNDKERHQLFLEPEGRNTK 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G+ST+LP+++QH +R+I GLE IIR GYAIEYD +NP L+PTLETK I GL Sbjct: 306 EIYIQGLSTSLPDDVQHDMVRSIAGLENAVIIRNGYAIEYDAVNPMTLWPTLETKLIDGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGT+GYEEAA QG++AGIN+A K + + R ++YIGV+IDDL +KG EP Sbjct: 366 FTAGQINGTSGYEEAAGQGIMAGINAACKILGEEPMTLGRDEAYIGVLIDDLVTKGTNEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAE+R+ LR DNAD RLT G + E R ++F++ Q LK+ + Sbjct: 426 YRLLTSRAEHRLLLRHDNADMRLTEKAYNYGLVTEERYRKFSEKRQAVADEIERLKTFRI 485 Query: 484 TSKNLSSTSISFKQDGKTRT---AYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 T + + + R A + L P+ S +N+ + D+ ++E+++IE Sbjct: 486 TPTANTLEKLVELNSAEIRDGILAIDMLRRPELSHKNVMYLADDSTILPKDIVEQVEIEV 545 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y + + + +++K IP D DY +P+L+ E +EKL + P + QAS+I G Sbjct: 546 KYEGYIKKSLQQVEKLKKMNAMKIPSDLDYDEVPSLAIEAREKLKKVLPLTIGQASRISG 605 Query: 601 MTPAALNLLLIYIKK 615 + PA +++LL+++++ Sbjct: 606 VNPADISILLVFLEQ 620 >gi|261824838|pdb|3G05|A Chain A, Crystal Structure Of N-Terminal Domain (2-550) Of E.Coli Mnmg gi|261824839|pdb|3G05|B Chain B, Crystal Structure Of N-Terminal Domain (2-550) Of E.Coli Mnmg Length = 576 Score = 516 bits (1328), Expect = e-144, Method: Compositional matrix adjust. Identities = 263/542 (48%), Positives = 353/542 (65%), Gaps = 5/542 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 33 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 92 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 93 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 152 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 153 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 212 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 213 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 272 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 273 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 332 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 333 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 392 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S+ + +R+ +Y+GV++DDL + G EPY Sbjct: 393 FAGQINGTTGYEEAAAQGLLAGLNAARLSDDKEGWAPARSQAYLGVLVDDLCTLGTKEPY 452 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 453 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 512 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A + E+++I+ Sbjct: 513 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 572 Query: 541 SY 542 Y Sbjct: 573 KY 574 >gi|90961108|ref|YP_535024.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus salivarius UCC118] gi|227892407|ref|ZP_04010212.1| glucose-inhibited division protein A [Lactobacillus salivarius ATCC 11741] gi|122449445|sp|Q1WVH6|MNMG_LACS1 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|90820302|gb|ABD98941.1| Putative tRNA (5-carboxymethylaminomethyl-2-thiouridylate) synthase subunit [Lactobacillus salivarius UCC118] gi|227865814|gb|EEJ73235.1| glucose-inhibited division protein A [Lactobacillus salivarius ATCC 11741] gi|300214039|gb|ADJ78455.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG (Glucose-inhibited division protein A) [Lactobacillus salivarius CECT 5713] Length = 637 Score = 516 bits (1328), Expect = e-144, Method: Compositional matrix adjust. Identities = 270/624 (43%), Positives = 381/624 (61%), Gaps = 10/624 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIV+G GHAGCEAA +A++G T LIT + M CNP+IGG KG +VREID Sbjct: 10 KDYDVIVVGAGHAGCEAALASARMGNETLLITINLEMVAFMPCNPSIGGPAKGIVVREID 69 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 A+ G MGR D +Q R+LN KGPAVR R QAD+ Y + M+ I +L + QG Sbjct: 70 AMGGEMGRNIDKTYVQMRMLNTGKGPAVRALRAQADKRQYSIEMKHTIEQTPHLTLRQGI 129 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + +V + +VVLTTGT RG I IG+L +G P+ L Sbjct: 130 VDDLIIEDGEVKGVVTNTGACYGAKSVVLTTGTAARGKIIIGELMYSSGPNNTQPALELS 189 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-----KITNRQI 238 + K F+ R KTGTP R+DG TI +DKTE+Q D FS+ + K+ + Q+ Sbjct: 190 KNLAKLGFELKRFKTGTPPRVDGNTIDYDKTEEQPGDVEPNHFSYESKDEDYLKVKD-QL 248 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C +T TN TH+II +N+ + +++G I+ GPRYCPSIEDKIVRF ++ HQ+FLEPE Sbjct: 249 SCWLTYTNEYTHKIIQDNLDRAPMFTGVIEGVGPRYCPSIEDKIVRFSDKPRHQLFLEPE 308 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 G NTD Y G+ST+LPEE+Q + +R+I GLE ++RPGYAIEYD ++P +L PTLETK Sbjct: 309 GRNTDEYYVQGLSTSLPEEVQQEMVRSIDGLEHAEMMRPGYAIEYDVVSPYQLRPTLETK 368 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I GL+ AGQ NGT+GYEEAA QG +AG+N+ R++ L+ I R+D+YIGVMIDDL +K Sbjct: 369 LIKGLYTAGQTNGTSGYEEAAGQGFIAGVNAGRRAKGLEEITLKRSDAYIGVMIDDLVTK 428 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYR+ TSRAEYR+ LR DNAD RLT +G ++G I + R F + + + L Sbjct: 429 GTNEPYRLLTSRAEYRLILRHDNADLRLTELGHEIGLISDERYAAFEEKKAQIEAEKQRL 488 Query: 479 KSLVLTSKNLSSTSISFKQDGKTRT---AYEFLSYPDFSIQNLFSICP-DARKFSSLVIE 534 + + + + D + + A EFL P + Q+L P A VIE Sbjct: 489 SKIRIKPNAEVNAFVEAHGDRELKDGVLATEFLRRPYVTYQDLLKFIPAPAEPLDRRVIE 548 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y ++ + +++K E + IP DYS + ++ E ++KL+ ++P L Q Sbjct: 549 QIEIQFKYEGYIKKEYAKVEKLKRMEAKKIPARIDYSRIEGIATEAQQKLAKIQPETLAQ 608 Query: 595 ASKIEGMTPAALNLLLIYIKKNTV 618 A +I G+ PA L++L +YI++ + Sbjct: 609 AGRISGVNPADLSILAVYIEQGKI 632 >gi|301299780|ref|ZP_07206022.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus salivarius ACS-116-V-Col5a] gi|300852593|gb|EFK80235.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus salivarius ACS-116-V-Col5a] Length = 637 Score = 516 bits (1328), Expect = e-144, Method: Compositional matrix adjust. Identities = 270/624 (43%), Positives = 381/624 (61%), Gaps = 10/624 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIV+G GHAGCEAA +A++G T LIT + M CNP+IGG KG +VREID Sbjct: 10 KDYDVIVVGAGHAGCEAALASARMGNETLLITINLEMVAFMPCNPSIGGPAKGIVVREID 69 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 A+ G MGR D +Q R+LN KGPAVR R QAD+ Y + M+ I +L + QG Sbjct: 70 AMGGEMGRNIDKTYVQMRMLNTGKGPAVRALRAQADKRQYSIEMKHTIEQTPHLTLRQGI 129 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + +V + +VVLTTGT RG I IG+L +G P+ L Sbjct: 130 VDDLIIEDGEVKGVVTNTGACYGAKSVVLTTGTAARGKIIIGELMYSSGPNNTQPALELS 189 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-----KITNRQI 238 + K F+ R KTGTP R+DG TI +DKTE+Q D FS+ + K+ + Q+ Sbjct: 190 KNLAKLGFELKRFKTGTPPRVDGNTIDYDKTEEQPGDVEPNHFSYESKDEDYLKVKD-QL 248 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C +T TN TH+II +N+ + +++G I+ GPRYCPSIEDKIVRF ++ HQ+FLEPE Sbjct: 249 SCWLTYTNEYTHKIIQDNLDRAPMFTGVIEGVGPRYCPSIEDKIVRFSDKPRHQLFLEPE 308 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 G NTD Y G+ST+LPEE+Q + +R+I GLE ++RPGYAIEYD ++P +L PTLETK Sbjct: 309 GRNTDEYYVQGLSTSLPEEVQQEMVRSIDGLEHAEMMRPGYAIEYDVVSPYQLRPTLETK 368 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I GL+ AGQ NGT+GYEEAA QG +AG+N+ R++ L+ I R+D+YIGVMIDDL +K Sbjct: 369 LIKGLYTAGQTNGTSGYEEAAGQGFIAGVNAGRRAKGLEEITLKRSDAYIGVMIDDLVTK 428 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYR+ TSRAEYR+ LR DNAD RLT +G ++G I + R F + + + L Sbjct: 429 GTNEPYRLLTSRAEYRLILRHDNADLRLTELGHEIGLISDERYAAFEEKKAQIEAEKQRL 488 Query: 479 KSLVLTSKNLSSTSISFKQDGKTRT---AYEFLSYPDFSIQNLFSICP-DARKFSSLVIE 534 + + + + D + + A EFL P + Q+L P A VIE Sbjct: 489 SKIRIKPNAEVNAFVETHGDRELKDGVLATEFLRRPYVTYQDLLKFIPAPAEPLDRRVIE 548 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y ++ + +++K E + IP DYS + ++ E ++KL+ ++P L Q Sbjct: 549 QIEIQFKYEGYIKKEYAKVEKLKRMEAKKIPARIDYSRIEGIATEAQQKLAKIQPETLAQ 608 Query: 595 ASKIEGMTPAALNLLLIYIKKNTV 618 A +I G+ PA L++L +YI++ + Sbjct: 609 AGRISGVNPADLSILAVYIEQGKI 632 >gi|94312437|ref|YP_585647.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cupriavidus metallidurans CH34] gi|166222725|sp|Q1LHJ8|MNMG_RALME RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|93356289|gb|ABF10378.1| glucose-inhibited cell-division protein [Cupriavidus metallidurans CH34] Length = 654 Score = 516 bits (1328), Expect = e-144, Method: Compositional matrix adjust. Identities = 284/627 (45%), Positives = 385/627 (61%), Gaps = 15/627 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DVIV+GGGHAG EAA AA++G T L++H T+G MSCNP+IGG+GKGHLV+E+D Sbjct: 5 KEFDVIVVGGGHAGTEAALAAARMGCQTLLLSHNIETLGQMSCNPSIGGIGKGHLVKEVD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 A+ G M D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q Sbjct: 65 AMGGAMAAATDEAGIQFRILNSSKGPAVRATRAQADRVLYRKAIRTRLENQPNLMLFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + + Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 125 VDDLMVEGDRVVGARTQVGIDFRARAVVLTAGTFLDGKIHVGLDNYTGGRAGDPAAVSLS 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQIECG 241 + GRLKTGTP R+DG+TI + E+Q D +P FSF+ + +Q+ C Sbjct: 185 ARLKELKLPQGRLKTGTPPRIDGRTIDFSVMEEQPGDLDPVPVFSFLGRPEQHPQQLPCW 244 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT TN TH +I + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPEGL Sbjct: 245 ITHTNSRTHDVIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPEGLT 304 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ YPNGIST+LP ++Q + + +I GLE +I+RPGYAIEYDY +P+ L +LE+K I Sbjct: 305 TNEFYPNGISTSLPFDVQLELVHSIRGLENAHILRPGYAIEYDYFDPRGLKSSLESKAIE 364 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQINGTTGYEEAAAQGL+AGIN+ + D R +Y+GV++DDL ++GV Sbjct: 365 GLFFAGQINGTTGYEEAAAQGLLAGINAGCYVRERDAWTPRRDQAYLGVLVDDLITRGVT 424 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAE+R+SLR DNAD RLT IG +LG + + R F + + LKS Sbjct: 425 EPYRMFTSRAEFRLSLREDNADMRLTEIGRELGVVDDVRWDAFNRKRDAVSRETERLKST 484 Query: 482 VLTSKNL-SSTSISFKQDGKTR--TAYEFLSYPDFSIQNLFSI----------CPDARKF 528 + L + ++ G R + + L P+ + L ++ D Sbjct: 485 WVNPTLLPEADAVPLLGKGIEREYSLADLLRRPEVRYEALVALQDGRFAPETPLADDTML 544 Query: 529 SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 + + E+++I Y Y RQ E +++ E +P +FDY+ + L E+ +KL+ + Sbjct: 545 AEQIREQIEIGIKYHGYIARQAAEVDKLEANESTKLPPNFDYTEVRGLGFEVSQKLNQHR 604 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIKK 615 P L QAS+I G+TPAA++LLL+++KK Sbjct: 605 PETLGQASRISGVTPAAISLLLVHLKK 631 >gi|75075770|sp|Q4R4P6|MTO1_MACFA RecName: Full=Protein MTO1 homolog, mitochondrial; Flags: Precursor gi|67971174|dbj|BAE01929.1| unnamed protein product [Macaca fascicularis] Length = 692 Score = 515 bits (1327), Expect = e-144, Method: Compositional matrix adjust. Identities = 287/630 (45%), Positives = 406/630 (64%), Gaps = 25/630 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA+ G+ T L+TH+ TIG MSCNP+ GG+GKGHL+RE+DAL Sbjct: 37 FDVIVIGGGHAGTEAATAAARCGSRTLLLTHRVDTIGQMSCNPSFGGIGKGHLMREVDAL 96 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGL R+ D +G+ ++VLN +KGPAV G R Q DR+LY+ MQ+EIL+ L V +G V Sbjct: 97 DGLCSRICDQSGVHYKVLNRRKGPAVWGLRAQIDRKLYKQNMQKEILNTPLLTVQEGAVE 156 Query: 126 GF--------NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 +T K +S +V+ D S + +V+LTTGTFLRG+I IG PAGR+GD Sbjct: 157 DLILTEPEPEHTGKCRVSGVVLVDGSTVYAESVILTTGTFLRGMIVIGLEMHPAGRLGDQ 216 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR- 236 PS L + K F GRLKTGTP R+ +I + KQ D +PFSF + + + Sbjct: 217 PSIGLAQTLEKLGFVVGRLKTGTPPRIAKDSINFSILNKQTPDNPSVPFSFTNETVWIKP 276 Query: 237 --QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 Q+ C +T TN I++ N+ ++ + GPRYCPSIE K++RF R HQ++ Sbjct: 277 EDQLPCYLTYTNPRVDEIVLNNLHLNSHVKETTR--GPRYCPSIESKVLRFPNRL-HQVW 333 Query: 295 LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT 354 LEPEG+++D++YP G+S LP E+Q + I I GLEK +I+PGY ++YDY++P+++ P+ Sbjct: 334 LEPEGMDSDLIYPQGLSMTLPTELQEKMITCIRGLEKAKVIQPGYGVQYDYLDPRQITPS 393 Query: 355 LETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDD 414 LET + LF AGQINGTTGYEEAAAQG++AGIN++ + ++ SRT+ YIGV+IDD Sbjct: 394 LETHLVQRLFFAGQINGTTGYEEAAAQGVIAGINASLRVSRKPPFVVSRTEGYIGVLIDD 453 Query: 415 LTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMK-LGCIGERRQKRFAKYIQEYNF 473 LT+ G EPYRMFTSR E+R+SLRPDNAD RLT G K GC+ ++R +R Sbjct: 454 LTTLGTSEPYRMFTSRVEFRLSLRPDNADIRLTLRGYKDAGCVSQQRYERACWMKSSLEE 513 Query: 474 LRSLLKSLVLTS---KNL-SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA-RKF 528 S+LKS+ +S KNL SIS + R A + L Y + + +L P+ +K+ Sbjct: 514 GISVLKSIEFSSSKWKNLIPEVSISTSRSLPVR-ALDVLKYEEVDMDSLAKAVPEPLKKY 572 Query: 529 SSL--VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLP--ALSNELKEKL 584 + + ERL+IE++Y + Q+ E K ++ +E +PKD DY ++ +LS+E++EKL Sbjct: 573 TKCRELAERLKIEATYESVLFHQLQEIKGVQQDEALQLPKDIDYLTIRDVSLSHEVREKL 632 Query: 585 SILKPFNLLQASKIEGMTPAALNLLLIYIK 614 +P + AS+I G+TPAA+ LL ++K Sbjct: 633 HFSRPQTIGAASRIPGVTPAAIINLLRFVK 662 >gi|17149039|gb|AAL35894.1| MTO1-like protein [Homo sapiens] Length = 692 Score = 515 bits (1327), Expect = e-144, Method: Compositional matrix adjust. Identities = 284/630 (45%), Positives = 405/630 (64%), Gaps = 25/630 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA+ G+ T L+TH+ TIG MSCNP+ GG+GKGHL+RE+DAL Sbjct: 37 FDVIVIGGGHAGTEAATAAARCGSRTLLLTHRVDTIGQMSCNPSFGGIGKGHLMREVDAL 96 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGL R+ D +G+ ++VLN +KGPAV G R Q DR+LY+ MQ+EIL+ L V +G V Sbjct: 97 DGLCSRICDQSGVHYKVLNRRKGPAVWGLRAQIDRKLYKQNMQKEILNTPLLTVQEGAVE 156 Query: 126 GF--------NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 +T K +S +V+ D S + +V+LTTGTFLRG+I IG PAGR+GD Sbjct: 157 DLILTEPEPEHTGKCRVSGVVLVDGSTVYAESVILTTGTFLRGMIVIGLETHPAGRLGDQ 216 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR- 236 PS L + K F GRLKTGTP R+ ++I + K D IPFSF + + + Sbjct: 217 PSIGLAQTLEKLGFVVGRLKTGTPPRIAKESINFSILNKHIPDNPSIPFSFTNETVWIKP 276 Query: 237 --QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 Q+ C +T TN I+++N+ ++ + GPRYCPSIE K++RF R HQ++ Sbjct: 277 EDQLPCYLTHTNPRVDEIVLKNLHLNSHVKETTR--GPRYCPSIESKVLRFPNRL-HQVW 333 Query: 295 LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT 354 LEPEG+++D++YP G+S LP E+Q + I I GLEK +I+PGY ++YDY++P+++ P+ Sbjct: 334 LEPEGMDSDLIYPQGLSMTLPAELQEKMITCIRGLEKAKVIQPGYGVQYDYLDPRQITPS 393 Query: 355 LETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDD 414 LET + LF AGQINGTTGYEEAAAQG++AGIN++ + ++ SRT+ YIGV+IDD Sbjct: 394 LETHLVQRLFFAGQINGTTGYEEAAAQGVIAGINASLRVSRKPPFVVSRTEGYIGVLIDD 453 Query: 415 LTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMK-LGCIGERRQKRFAKYIQEYNF 473 LT+ G EPYRMFTSR E+R+SLRPDNAD+RLT G K GC+ ++R +R Sbjct: 454 LTTLGTSEPYRMFTSRVEFRLSLRPDNADSRLTLRGYKDAGCVSQQRYERACWMKSSLEE 513 Query: 474 LRSLLKSLVLTS----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA-RKF 528 S+LKS+ S K + SIS + R A + L Y + + + P+ +K+ Sbjct: 514 GISVLKSIEFLSSKWKKLIPEASISTSRSLPVR-ALDVLKYEEVDMDSCTKAVPEPLKKY 572 Query: 529 SSL--VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLP--ALSNELKEKL 584 + + ERL+IE++Y + Q+ E K ++ +E +PKD DY ++ +LS+E++EKL Sbjct: 573 TKCRELAERLKIEATYESVLFHQLQEIKGVQQDEALQLPKDLDYLTIRDVSLSHEVREKL 632 Query: 585 SILKPFNLLQASKIEGMTPAALNLLLIYIK 614 +P + AS+I G+TPAA+ LL ++K Sbjct: 633 HFSRPQTIGAASRIPGVTPAAIINLLRFVK 662 >gi|118443722|ref|YP_876980.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium novyi NT] gi|166222928|sp|A0PX78|MNMG_CLONN RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|118134178|gb|ABK61222.1| glucose-inhibited division protein A [Clostridium novyi NT] Length = 632 Score = 515 bits (1327), Expect = e-144, Method: Compositional matrix adjust. Identities = 266/618 (43%), Positives = 386/618 (62%), Gaps = 13/618 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DV VIG GHAGCEAA +A+LG ST + +++ M CNP IGG KGHLVREIDAL Sbjct: 8 FDVAVIGAGHAGCEAALASARLGVSTVVFATDLASVAMMPCNPNIGGTAKGHLVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG D IQ R+LN KGPAV R QAD+ Y M+ + + +NL + Q E+ Sbjct: 68 GGEMGINIDHTYIQSRMLNTSKGPAVHSLRAQADKRKYAERMKHVLETTDNLHLKQAEII 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + E + + ++ ++ + + +L TG +L+ I IG + G G +P+N L S Sbjct: 128 KVDIEDSKVKGVLTKNGAYYKVKAAILCTGVYLKSRIIIGDINYEGGPSGLAPANMLSQS 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 ++ R KTGTPAR++ +T+ + K +Q DE ++PFSFM++ I QI C +T + Sbjct: 188 LIESGIKITRFKTGTPARINRRTVDFSKMIEQKGDENIVPFSFMSENIEREQISCYLTYS 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 ET ++++ENI S +Y+G IKS GPRYCPS EDKI+RF E++ HQIF+EPEG NT+ + Sbjct: 248 GDETKKVVLENIDRSPLYNGSIKSVGPRYCPSFEDKIMRFPEKDKHQIFIEPEGENTEEM 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+S++LPE++Q + +R++PGLE ++R YAIEYD I+P +L +LE K I GLF Sbjct: 308 YVGGMSSSLPEDVQLKMLRSVPGLENAEMMRTAYAIEYDCIDPTQLELSLEFKDIDGLFS 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ+NG++GYEEA QGL+AGIN+A K + + R+D+YIGV+IDDL +KG EPYR Sbjct: 368 AGQMNGSSGYEEAGCQGLIAGINAALKLQGKEPLILKRSDAYIGVLIDDLVTKGTQEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 M TSRAEYR+ LR DNAD RLT +G K+G + E R +RF K LK++ +T+ Sbjct: 428 MMTSRAEYRLLLRQDNADLRLTEMGHKIGLVKEDRYERFTKRKTAIEDEIERLKNIQITN 487 Query: 486 KN--------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 K L+S + K + YE + P+ + + + D + V E++ Sbjct: 488 KQEVNKFLEGLNSAGLK-----KPISLYELIKRPELNYFVVKDLDKDRAELPRDVQEQVN 542 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I S Y Y +Q+ + ++ K E RLIPK+FDY + L E +KL +KP N+ QAS+ Sbjct: 543 IISKYEGYIQKQLEQVEQFKKLENRLIPKEFDYKLVKGLRTEAIQKLDKIKPVNIGQASR 602 Query: 598 IEGMTPAALNLLLIYIKK 615 I G++PA +++LLI +++ Sbjct: 603 ISGVSPADISVLLIVLEQ 620 >gi|291526552|emb|CBK92139.1| glucose-inhibited division protein A [Eubacterium rectale DSM 17629] Length = 646 Score = 515 bits (1327), Expect = e-144, Method: Compositional matrix adjust. Identities = 271/631 (42%), Positives = 384/631 (60%), Gaps = 26/631 (4%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + +YDV+V+G GHAGCEAA A+LG T + T +I M CNP IGG KGHLVR Sbjct: 5 FVEENYDVVVVGAGHAGCEAALACARLGLETIVFTVSVDSIALMPCNPNIGGSSKGHLVR 64 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G MG+ D IQ ++LN KGPAV R QAD+ Y + M++ + + ++L + Sbjct: 65 EIDALGGEMGKNIDKTFIQSKMLNKSKGPAVHSLRAQADKAEYSMEMRKTLQNTDHLTIR 124 Query: 121 QGEVAGFNT-EKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 QGEV+ T E N I ++ C +VL TGT+LR G++ G G + Sbjct: 125 QGEVSEIVTDENNNIVGAKTTSGALYHCKAIVLCTGTYLRARCLTGEMITHTGPNGLLAA 184 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KITNRQ 237 N L S + + R KTGTPAR+D +++ + K E+QF DER++PFSF TD + Q Sbjct: 185 NHLTQSLIDHGIEMRRFKTGTPARVDKRSLDFSKMEEQFGDERVVPFSFTTDPESVQIDQ 244 Query: 238 IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 + C +T TN +TH II N+ S IY+G I+ GPRYCPSIEDK+V+F E+ HQIF+EP Sbjct: 245 VSCWLTYTNSKTHEIIRNNLDRSPIYAGIIEGTGPRYCPSIEDKVVKFAEKERHQIFIEP 304 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EGLNT+ +Y G+S+++PE++Q++ RT+PGLE V I+R YAIEYD IN +L+ +LE Sbjct: 305 EGLNTNEMYVGGMSSSMPEDVQYEMYRTLPGLENVKIVRDAYAIEYDCINANQLYASLEF 364 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 KKI GLF GQ NG++GYEEAA QGL+AGIN+A K + R+++YIGV+IDDL + Sbjct: 365 KKIHGLFSGGQFNGSSGYEEAACQGLIAGINAAMKILGKKPLILDRSEAYIGVLIDDLVT 424 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL 477 K EPYRM TSRAEYR+ LR DNAD RLT G ++G I + R Y+++ Sbjct: 425 KKNREPYRMMTSRAEYRLLLRQDNADLRLTEKGYEVGLISKER----------YDYVCKK 474 Query: 478 LKSLVLTSKNLSSTSISFKQD-------------GKTRTAYEFLSYPDFSIQNLFSICPD 524 + + + +S +I + D T E + P+ L I PD Sbjct: 475 KELIDKEIERVSHVNIGARADVQEILKKYNSIELSNGTTLEELIRRPELDYDKLAPIDPD 534 Query: 525 ARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKL 584 K S E++ I YA Y RQ+ + K EK+L+P DFDY+++ L E ++KL Sbjct: 535 RPKLSDDTREQINILIKYAGYISRQIKQVSHFKKLEKKLLPTDFDYNTISGLRIEAQQKL 594 Query: 585 SILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 + +P ++ QAS+I G+TPA +++LL+++++ Sbjct: 595 NEFQPLSIGQASRISGVTPADISVLLVFLEQ 625 >gi|226326137|ref|ZP_03801655.1| hypothetical protein COPCOM_03956 [Coprococcus comes ATCC 27758] gi|225205679|gb|EEG88033.1| hypothetical protein COPCOM_03956 [Coprococcus comes ATCC 27758] Length = 630 Score = 515 bits (1327), Expect = e-144, Method: Compositional matrix adjust. Identities = 266/618 (43%), Positives = 380/618 (61%), Gaps = 12/618 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YD++V+G GHAGCEAA A+LG T + T +I M CNP IGG KGHLVRE+DA Sbjct: 14 AYDIVVVGAGHAGCEAALACARLGLKTIVFTVSVESIAMMPCNPNIGGTSKGHLVRELDA 73 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ ++LN KGPAV R QAD+ Y M++ + +QENL++ QGEV Sbjct: 74 LGGEMGKNIDKTFIQSKMLNKSKGPAVHSLRAQADKNKYSNTMRQTLENQENLEIRQGEV 133 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ + ++ RC VVL TGT+L+ G + G G +N L + Sbjct: 134 VNILVEDGSVTGVQTYSGAIYRCKAVVLCTGTYLKARCIYGDVSTHTGPNGLQAANYLTD 193 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KITNRQIECGI 242 + R KTGTPAR+D ++I + K E+QF DER++PFSF TD + Q C + Sbjct: 194 CLKELGIKMYRFKTGTPARIDKRSIDFSKMEEQFGDERVVPFSFTTDPEDVQIEQASCWL 253 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II +N+ S +YSG I+ GPRYCPSIEDKIV+F ++ HQ+F+EPEGL T Sbjct: 254 TYTNPTTHEIIRKNLDRSPLYSGMIEGTGPRYCPSIEDKIVKFADKERHQVFIEPEGLET 313 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + +Y G+S++LPE++Q++ R++PGLE I++ YAIEYD I+ ++L PTLE K I G Sbjct: 314 NEMYIGGMSSSLPEDVQYEMYRSVPGLEHAKIVKNAYAIEYDCIDARQLHPTLEFKSIHG 373 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF GQ NG++GYEEAAAQGL+AGIN+A + + + R+ +YIGV+IDDL +K E Sbjct: 374 LFSGGQFNGSSGYEEAAAQGLIAGINAALEVLGREQLILDRSQAYIGVLIDDLVTKESHE 433 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRM TSRAEYR+ LR DNAD RLT IG K+G I + +R+ + + +R + L Sbjct: 434 PYRMMTSRAEYRLLLRQDNADQRLTEIGHKIGLISD---ERYQMLLDKEEIIRKEIHRLE 490 Query: 483 LTSKNLSSTSISFKQDGKT------RTAYEFLSYPDFSIQNLFSICP-DARKFSSLVIER 535 T+ S F + + T E + P+ + + L I +FS ++E+ Sbjct: 491 HTNVGTSQEITDFLTNCDSTPLTSGSTLAELIKRPELNYKLLEPIDHMRTERFSREIMEQ 550 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 + I Y Y RQ+ + ++ K E R IP D DY ++P+L E +KL +P ++ QA Sbjct: 551 IDINIKYEGYIKRQLKQVEQFKKLETRKIPTDIDYDAVPSLRIEAVQKLKQFRPLSIGQA 610 Query: 596 SKIEGMTPAALNLLLIYI 613 S+I G++PA +++LL+Y+ Sbjct: 611 SRISGVSPADISVLLVYL 628 >gi|260434562|ref|ZP_05788532.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Synechococcus sp. WH 8109] gi|260412436|gb|EEX05732.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Synechococcus sp. WH 8109] Length = 643 Score = 515 bits (1327), Expect = e-144, Method: Compositional matrix adjust. Identities = 273/618 (44%), Positives = 382/618 (61%), Gaps = 8/618 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 S+DVIV+GGGHAGCEAA AA+LG +TAL + I CNPA+GG K LV E+DA Sbjct: 10 SFDVIVVGGGHAGCEAAITAARLGLNTALFSLNLDRIAWQPCNPAVGGPAKSQLVHEVDA 69 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G++GR+ADA IQ R+LN +GPAV R Q D+ LY M + + NL + + V Sbjct: 70 LGGVIGRLADATAIQKRILNASRGPAVWALRAQTDKRLYSRQMLQLLQHTPNLALREAMV 129 Query: 125 AGFNT----EKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 G T E+ IS I S+ V+LT GTFL G I +G + AGR G+ + Sbjct: 130 TGLETTGEGEQQRISGIRTYFGSVYGADAVILTAGTFLGGRIWVGHQSMAAGRAGEQAAE 189 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSF-MTDKITNRQIE 239 L + + F T RLKTGTPAR+D ++I D+ E+Q +D FSF ++ Q+ Sbjct: 190 GLTEALQQLGFQTDRLKTGTPARVDRRSIALDQLEEQPSDAADRFFSFDPAAWVSGEQMS 249 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C ITRT ETH++I +N+ +AIY G I S GPRYCPSIEDKIVRF +++ HQIFLEPEG Sbjct: 250 CHITRTTAETHQLIRDNLHLTAIYGGVIDSKGPRYCPSIEDKIVRFADKDSHQIFLEPEG 309 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 +T +Y G ST LPE IQ Q +R++PGLE+ ++RP Y+++YDY+ +L P+LETK+ Sbjct: 310 RDTPEIYVQGFSTGLPEPIQLQLLRSLPGLEQAVMLRPAYSVDYDYLPATQLKPSLETKR 369 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 + GLF AGQ+NGTTGYEEAAAQGLVAG+N+AR + + F R SYIG MIDDL SK Sbjct: 370 VRGLFSAGQLNGTTGYEEAAAQGLVAGVNAARLIGGQEPVHFPREGSYIGTMIDDLVSKD 429 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 + EPYR+ TSR+EYR+ LR DNAD RLTP+G +LG I +RR + F +Q + L+ Sbjct: 430 LREPYRVLTSRSEYRLILRGDNADRRLTPLGRELGLIDDRRWQLFEDKLQAMEGEKQRLE 489 Query: 480 SLVLTSKNLSSTSISFKQDGKTR---TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 ++ L + + ++ + + T + L P +L V E Sbjct: 490 TVRLKVSDPVAPAVEKETGAAIKGSITLADLLRRPGMHAADLVRHGLADADLPMPVREGA 549 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y+ Y RQ + ++K + +R +P D +Y+ + LSNE +EKL+ ++P L QAS Sbjct: 550 EIDIKYSGYLQRQQQQIDQVKRQSQRKLPADLNYAGIGTLSNEAREKLAAIQPSTLGQAS 609 Query: 597 KIEGMTPAALNLLLIYIK 614 +I G++ A + LL++++ Sbjct: 610 RIPGVSKADITALLMWLE 627 >gi|121608050|ref|YP_995857.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Verminephrobacter eiseniae EF01-2] gi|121552690|gb|ABM56839.1| glucose inhibited division protein A [Verminephrobacter eiseniae EF01-2] Length = 636 Score = 515 bits (1326), Expect = e-144, Method: Compositional matrix adjust. Identities = 276/626 (44%), Positives = 376/626 (60%), Gaps = 31/626 (4%) Query: 23 VAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRV 82 AA+LG T L+T T+G MSCNP+IGG+GKGHLV+E+DAL G M D +GIQFR+ Sbjct: 2 AAARLGQRTLLLTQSLETLGQMSCNPSIGGIGKGHLVKEVDALGGAMALATDESGIQFRI 61 Query: 83 LNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDN 142 LN KGPAVR R QADR LY+ A++R + +Q L + Q V E + + V Q Sbjct: 62 LNRSKGPAVRATRAQADRLLYKAAIRRRLENQPGLWLFQQAVDDLMLEGDRVVGAVTQVG 121 Query: 143 SMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPA 202 + VVLT GTFL G IH+G AGR G+ + L + GRLKTGTP Sbjct: 122 VVFCARAVVLTAGTFLDGKIHVGLSHYAAGRAGEPSAIGLSARLKELKLPQGRLKTGTPP 181 Query: 203 RLDGKTIIWDKTEKQFAD-------ERLIP-FSFMTD-----KITNRQIECGITRTNLET 249 R+DG++I W + E+Q D +P FSFM ++ +Q+ C IT TN T Sbjct: 182 RIDGRSIDWSQCEEQPGDGMPGGVNAGQVPVFSFMAHAYGGARMHPQQLPCWITHTNQRT 241 Query: 250 HRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNG 309 H II S +++G I+ GPRYCPS+EDKI RF +++ HQ+FLEPEGL T VYPNG Sbjct: 242 HAIIRSGFDRSPMFTGSIEGVGPRYCPSVEDKINRFADKDSHQVFLEPEGLGTHEVYPNG 301 Query: 310 ISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQI 369 IST+LP +IQ+Q +R++ GLE +I+RPGYAIEYDY +P+ L ET++I GLF AGQI Sbjct: 302 ISTSLPFDIQYQLVRSMAGLENAHILRPGYAIEYDYFDPRALKSNFETRQIRGLFFAGQI 361 Query: 370 NGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTS 429 NGTTGYEEAAAQGL AG+N+A + R +Y+GV++DDL +KGV EPYRMFTS Sbjct: 362 NGTTGYEEAAAQGLFAGVNAALQCRGDAPWLPGRDQAYLGVLVDDLITKGVTEPYRMFTS 421 Query: 430 RAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNL- 488 RAE+R+ LR DNAD RLT +G ++G + + R + F++ LK+ + +NL Sbjct: 422 RAEFRLQLREDNADMRLTEVGRRMGLVDDARWEVFSRKRDAVLRETERLKATWVNPRNLP 481 Query: 489 --SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-------------VI 533 S + K + +E L PD L S+ D K+++ V+ Sbjct: 482 DIESGRVLGKPMAHEYSLFELLRRPDVDYAGLMSL--DGGKYAAADVSRETLGMLSESVV 539 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I + YA Y RQ E + E +P DY+ + ALS E ++ LS +P L Sbjct: 540 EQVEIAAKYAGYIERQKGEVERAAHFETLRLPAGLDYAQVTALSIEARQVLSRHRPETLG 599 Query: 594 QASKIEGMTPAALNLLLIYIKKNTVK 619 QAS+I G+TPAA++LLL+++KK K Sbjct: 600 QASRITGITPAAISLLLVHLKKGGFK 625 >gi|296330031|ref|ZP_06872515.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305676755|ref|YP_003868427.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Bacillus subtilis subsp. spizizenii str. W23] gi|296153070|gb|EFG93935.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305414999|gb|ADM40118.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Bacillus subtilis subsp. spizizenii str. W23] Length = 628 Score = 515 bits (1326), Expect = e-144, Method: Compositional matrix adjust. Identities = 269/618 (43%), Positives = 381/618 (61%), Gaps = 7/618 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAG EAA +A+ GA T ++T + M CNP++GG KG +VREIDAL Sbjct: 8 YDVIVIGAGHAGVEAALASARQGAKTLVLTINLDMVAFMPCNPSVGGPAKGIVVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MGR D IQ R+LN KGPAVR R QAD+ Y+ M+ + + NL ++QG V Sbjct: 68 GGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFQYQHEMKNTLEKEPNLTMLQGIVE 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E ++ Q + R VV+TTGT+LRG I +G L +G PS L Sbjct: 128 RLIVEDGECRGVITQTGAHYRAKAVVMTTGTYLRGRIILGDLSYSSGPNNQQPSIKLSEH 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + FD R KTGTP R+ +I + KTE Q D+ FS+ T + Q+ C +T T Sbjct: 188 LEELGFDLVRFKTGTPPRVKSDSIDYSKTEIQPGDDVPRAFSYETVEYITDQLPCWLTYT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 + +TH II N+ S +YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT V Sbjct: 248 SPKTHEIIDSNLHRSPMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQEV 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+ST+LPE++Q + + TIPGLE V ++R GYAIEYD I P +L+PTLETKKI+ L+ Sbjct: 308 YVQGLSTSLPEDVQQRMLATIPGLENVQMMRAGYAIEYDAIVPTQLWPTLETKKITNLYT 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGT+GYEEAA QG++AGIN+ RK+ + + SR+D+YIGV+IDDL +KG EPYR Sbjct: 368 AGQINGTSGYEEAAGQGIMAGINAGRKALGKEEVILSRSDAYIGVLIDDLVTKGTNEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL-- 483 + TSRAEYR+ LR DNAD RLT IG ++G I + R F K + L S+++ Sbjct: 428 LLTSRAEYRLLLRHDNADLRLTEIGHRIGLISDERYAAFEKKKAAIEAEKKRLHSVIIKP 487 Query: 484 ---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + + S S +DG T + + P+ + + + + P V E+++I+ Sbjct: 488 SPENQEYIRSLGGSELKDGVRGT--DLMKRPEMNYETVTKLAPPEVPVPQDVAEQVEIQV 545 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y + + + +++K E + IP DY ++ ++ E ++KL ++P ++ QAS+I G Sbjct: 546 KYEGYIEKSLQQVEKLKKMENKKIPDRIDYDAIKGIATEARQKLKNVRPLSVAQASRISG 605 Query: 601 MTPAALNLLLIYIKKNTV 618 + PA +++LL+Y+++ + Sbjct: 606 VNPADISILLVYLEQGRI 623 >gi|301116049|ref|XP_002905753.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Phytophthora infestans T30-4] gi|262109053|gb|EEY67105.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Phytophthora infestans T30-4] Length = 696 Score = 515 bits (1326), Expect = e-144, Method: Compositional matrix adjust. Identities = 280/616 (45%), Positives = 384/616 (62%), Gaps = 28/616 (4%) Query: 25 AKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLN 84 ++ GA TAL+T K +TIG MSCNP+IGG+GKG LVRE+DA+ GLMG+VADAAGIQFR+LN Sbjct: 49 SRTGAKTALVTQKLATIGEMSCNPSIGGVGKGTLVREVDAMGGLMGQVADAAGIQFRMLN 108 Query: 85 VKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEK---------NIIS 135 KGPAVRGPR Q DR+LY+ +Q+ + NL +++ V EK + Sbjct: 109 SAKGPAVRGPRAQMDRDLYQQGIQKALQELPNLWLVEDGVDDLMLEKINQSNDDVEERVK 168 Query: 136 SIVMQDNSMIRCSTVVLTTGTFLRGVIHIG-KLKIPAGR-MGDS-----PSNSLFNSFMK 188 +V I+ S VV+TTGTFLRG+I+ G ++IPAGR M D+ P+ L + + Sbjct: 169 GVVTSSGREIQASQVVITTGTFLRGMIYQGPDIRIPAGRHMRDTAGLEPPAVGLAQTLER 228 Query: 189 FDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK----ITNRQIECGITR 244 F GRLKTGTP RLDG+TI + E Q +D PFSF+ + + ++Q+ C T Sbjct: 229 CKFPLGRLKTGTPPRLDGRTIDYSDLEVQPSDNPPKPFSFLNEHKQVPLADKQVVCHATY 288 Query: 245 TNLETHRIIMENIKHSAIYSG--DIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 TN ++HRI+ +N+ Y G D + GPRYCPSI+ K+VRF +R+ HQ++LEPEGLNT Sbjct: 289 TNEDSHRIVRDNLHMLPQYDGGRDGEGVGPRYCPSIDVKVVRFADRSRHQLWLEPEGLNT 348 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +VYPNGISTALPE +Q + +RTI GL+KV IIR GY++EYDY++P+ L PTLETKK+SG Sbjct: 349 HLVYPNGISTALPENLQLELLRTIKGLKKVEIIRAGYSVEYDYVDPRSLHPTLETKKLSG 408 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LFLAGQINGTTGYEEAAAQG+VAG+N+ + + + R D++ GV+IDDL S G E Sbjct: 409 LFLAGQINGTTGYEEAAAQGVVAGMNAGLSAMGREPLILDRADAFTGVLIDDLISLGTTE 468 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGC-IGERRQKRFAKYIQEYNFLRSLLKSL 481 PYRMFTSR+E+R+ LR DNAD RLT + G I R ++ + + + R L Sbjct: 469 PYRMFTSRSEFRLLLRADNADLRLTRKAFEHGAGIPSERMEKLERKEKAMEYARQALDEF 528 Query: 482 VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSIC-----PDARKFSSLVIERL 536 V + + DG R+A + L++ + Q++ + A + E + Sbjct: 529 VRDPHEWNRYGVKVGLDGVKRSAAQILAFSTVTPQDIERLWRQVGYEHADALPDEIKEFM 588 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 + E YA Q E + + ++ IP+ DYS LP +SNE +EKL +P + AS Sbjct: 589 KTECLYATQLRAQHQEIRVFRNKQHVQIPEWVDYSELPMISNEEREKLQQAQPATIHAAS 648 Query: 597 KIEGMTPAALNLLLIY 612 +I G+ A L LL Y Sbjct: 649 RIAGIRSATLLLLYQY 664 >gi|195487892|ref|XP_002092085.1| GE13994 [Drosophila yakuba] gi|194178186|gb|EDW91797.1| GE13994 [Drosophila yakuba] Length = 661 Score = 515 bits (1326), Expect = e-144, Method: Compositional matrix adjust. Identities = 280/634 (44%), Positives = 413/634 (65%), Gaps = 27/634 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+VIGGGHAG EA+A AA++G+ T L+THK TIG MSCNP+ GG+GKGHL+RE+DAL Sbjct: 31 YDVVVIGGGHAGTEASAAAARMGSRTMLLTHKLETIGEMSCNPSFGGIGKGHLMREVDAL 90 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DG+ R D +G+ ++VLN ++GPAV GPR Q DR+LY+ A+Q+E+ S NL++ V Sbjct: 91 DGVCARCCDVSGVHYKVLNRRRGPAVWGPRAQIDRQLYKKAVQQELHSTPNLEIRAAAVD 150 Query: 126 GF------NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 +T+ + +++ ++R +VVLTTGTFLR I+IG PAGR+GD+P+ Sbjct: 151 NLLIEDEQDTQARRCTGVLLASGEVVRSRSVVLTTGTFLRAHINIGLEVRPAGRIGDAPA 210 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI---TNR 236 +L + + F GRLKTGTP R+ ++ + + ++ D+ +PFSF+ + Sbjct: 211 KALGEAIDRLGFRMGRLKTGTPPRIAKSSVDYSQLQRHDGDDPPMPFSFLNKDVWLPAKD 270 Query: 237 QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLE 296 Q+ C +T T + I+ +N+ + + +I GPRYCPSIE KI+RFG + HQ++LE Sbjct: 271 QLPCYLTYTTPKVSDIVRDNLHVNRHVTEEIT--GPRYCPSIESKILRFGAKV-HQVWLE 327 Query: 297 PEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLE 356 PEGL++ +VYP GIS LP + Q + + I GLEK +++PGY +EYD+I+P+EL+PTLE Sbjct: 328 PEGLDSPLVYPQGISCTLPHDQQVELVHAIQGLEKAVVVQPGYGVEYDFIDPRELYPTLE 387 Query: 357 TKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDC--ICFSRTDSYIGVMIDD 414 TK++ GLF AGQINGTTGYEEAAAQG++AG N+A K+ D + SRT+ YIGV+IDD Sbjct: 388 TKRVPGLFFAGQINGTTGYEEAAAQGIIAGANAAGKTRHGDGRQLTISRTEGYIGVLIDD 447 Query: 415 LTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFL 474 LTS G EPYRMFTSRAE+R+SLRPDNAD RLT G + G + R + F Q L Sbjct: 448 LTSLGTNEPYRMFTSRAEFRLSLRPDNADMRLTKKGYEFGLVSSDRYQHFQ---QTEERL 504 Query: 475 RSLLKSLVLTSKNL----SSTSISFKQDGKTRTAYEFLSYP--DFSIQNLFSICPDARKF 528 +S ++SL K+ + + + +TA++ L P + +I+ L I P+ + Sbjct: 505 QSAIESLRRLRKHTHYWRQALDLPKAKASVEKTAFDMLGIPADNITIEQLIQIHPNELSW 564 Query: 529 ---SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDY-SSLPALSNELKEKL 584 + ERL+IE+ Y+ + Q + ++++ EE+ IP D DY S +LSNE ++KL Sbjct: 565 LKGERNLAERLKIEALYSFFVDEQQRDVEDVRREERLSIPADIDYFSKSLSLSNEERQKL 624 Query: 585 SILKPFNLLQASKIEGMTPAALNLLLIYIKKNTV 618 ++++P + AS+I+G+TP+ + +L Y+KK V Sbjct: 625 TLIQPQTIAAASRIQGVTPSTIVRILKYVKKAEV 658 >gi|296198575|ref|XP_002746780.1| PREDICTED: protein MTO1 homolog, mitochondrial-like [Callithrix jacchus] Length = 700 Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust. Identities = 289/630 (45%), Positives = 406/630 (64%), Gaps = 29/630 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA+ G+ T L+TH+ TIG MSCNP+ GG+GKGHL+RE+DAL Sbjct: 37 FDVIVIGGGHAGTEAATAAARCGSRTLLLTHRVDTIGQMSCNPSFGGIGKGHLMREVDAL 96 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGL R+ D +G+ ++VLN KGPAV G R Q DR+LY+ MQ+EILS L V +G V Sbjct: 97 DGLCSRICDQSGVHYKVLNRCKGPAVWGLRAQIDRKLYKQNMQKEILSTPLLTVQEGAVE 156 Query: 126 GF--------NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 +T K +S +++ V+LTTGTFLRG+I IG PAGR+GD Sbjct: 157 DLILTEPEPEHTGKCRVSGVIL----AFIFERVILTTGTFLRGMIVIGLEMHPAGRLGDQ 212 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR- 236 PS L + K F GRLKTGTP R+ +I + KQ D +PFSFM + + + Sbjct: 213 PSIGLAQTLEKLGFVVGRLKTGTPPRIAKDSINFSILNKQTPDNPSLPFSFMNETVWIKP 272 Query: 237 --QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 Q+ C +T TN I+++N+ ++ I+ GPRYCPSIE K++RF R HQ++ Sbjct: 273 EDQLPCYLTHTNPRVDEIVLKNLHLNSHVKETIR--GPRYCPSIESKVLRFPNRQ-HQVW 329 Query: 295 LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT 354 LEPEG+++D++YP G+S LP E+Q + I I GLEK +I+PGY ++YDY++P+++ P+ Sbjct: 330 LEPEGMDSDLIYPQGLSMTLPAELQEKMITCIRGLEKAKVIQPGYGVQYDYLDPRQITPS 389 Query: 355 LETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDD 414 LET + LF AGQINGTTGYEEAAAQG++AGIN++ + N+ SRT+ YIGV+IDD Sbjct: 390 LETHLVQRLFFAGQINGTTGYEEAAAQGVIAGINASLRVNRKPPFVVSRTEGYIGVLIDD 449 Query: 415 LTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMK-LGCIGERRQKRFAKYIQEYNF 473 LT+ G EPYRMFTSR E+R+SLRPDNAD+RLT G K GC+ ++R +R Sbjct: 450 LTTLGTSEPYRMFTSRVEFRLSLRPDNADSRLTLRGYKEAGCVSQQRYERACWMKSSLEE 509 Query: 474 LRSLLKSLVLTS---KNL-SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA-RKF 528 S+LKS+ +S KNL SIS + R A + L Y + + +L P+ +K+ Sbjct: 510 GISVLKSIEFSSSKWKNLIPEASISTSRSLPVR-ALDVLKYEEVDVDSLAKAVPEPLKKY 568 Query: 529 SSL--VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLP--ALSNELKEKL 584 + + ERL+IE++Y + Q+ E KE++ +E +PKD DY ++ +LS+E++EKL Sbjct: 569 TKCRELAERLKIEATYESVLFHQLQEIKEVQRDEALQLPKDLDYLTVRDVSLSHEVREKL 628 Query: 585 SILKPFNLLQASKIEGMTPAALNLLLIYIK 614 +P + AS+I G+TPAA+ LL ++K Sbjct: 629 HFSRPQTIGAASRIPGVTPAAIINLLRFVK 658 >gi|158321889|ref|YP_001514396.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Alkaliphilus oremlandii OhILAs] gi|205831486|sp|A8MKR8|MNMG_ALKOO RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|158142088|gb|ABW20400.1| glucose inhibited division protein A [Alkaliphilus oremlandii OhILAs] Length = 630 Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust. Identities = 266/627 (42%), Positives = 390/627 (62%), Gaps = 13/627 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDV+V+G GHAGCEAA A++G ST ++T I + CNP+IGG GKGHLVREIDA Sbjct: 8 NYDVVVVGAGHAGCEAALATARMGYSTMMLTMSLDAIAMLPCNPSIGGTGKGHLVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG D IQ R+LN KGPAV R QAD+ Y + M++ + ++ NL ++QGEV Sbjct: 68 LGGEMGLNIDKTFIQSRMLNTAKGPAVHSLRAQADKTRYHIEMKKMLENEPNLHLLQGEV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E N + +V + ++ V+L TG +L+ I +G++ +G G P+ L Sbjct: 128 VDIIVEDNTVKGVVTKTGAIYYGKAVILATGVYLKSKIFMGEVNYESGPNGLFPALYLSE 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + R KTGTPAR+ +I + K Q DE ++PFSFM + + QI C +TR Sbjct: 188 KLKALGCNMRRFKTGTPARIHKDSIDFSKVSVQIEDEEIVPFSFMNEALEKEQIPCWLTR 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETHRII EN+ SA+Y GDI+S GPRYCPSIEDKIVRF E+ HQIF+EPEG T Sbjct: 248 TTEETHRIIKENLGRSAMYRGDIESTGPRYCPSIEDKIVRFSEKPSHQIFIEPEGAETKE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G ST+LPEE+Q Q +R++ GLE I+RP YAIEYD I+P +L +LE K I+ LF Sbjct: 308 MYIQGFSTSLPEEVQVQMVRSVIGLENAIIMRPAYAIEYDCIDPTQLKASLEVKHINNLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ NG++GYEEAAAQGL+AGIN+ K D R+++YIGV+IDDL +KG EPY Sbjct: 368 SAGQFNGSSGYEEAAAQGLMAGINAVLKIRGEDPFILDRSEAYIGVLIDDLVTKGTNEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSR+EYR+ LR DNAD RLT G LG + ++ R+ +Y+ + +++ ++ L T Sbjct: 428 RMMTSRSEYRLVLRQDNADLRLTEKGYALGLV---KEDRYERYLLKKEHIKNEMERLKTT 484 Query: 485 SKNLSSTSISFKQDGKT-----RTAYEFLSYPDFSIQNLFSICPDARKFSSLVIE---RL 536 + + + + ++ T + Y+ L P+ + +N+ I D + L+ + + Sbjct: 485 NVSPTIANPVLERAESTPIKVGMSLYDLLKRPELTYENIKEI--DGTRPQDLMKDAQFQC 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 ++ Y Y +Q+ + + K E + + +D DY+ + L E ++KL+ ++P ++ QAS Sbjct: 543 EVMIKYEGYIEKQLRQIDQFKKLENKKLREDIDYNEIDGLRIEARQKLNAIRPLSVGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTVKLNEI 623 +I G++PA +++LLIY+++ K E+ Sbjct: 603 RISGVSPADISVLLIYLEQKRRKKGEV 629 >gi|167571772|ref|ZP_02364646.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia oklahomensis C6786] Length = 630 Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust. Identities = 275/604 (45%), Positives = 374/604 (61%), Gaps = 15/604 (2%) Query: 27 LGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVK 86 +GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL G M D GIQFR+LN Sbjct: 1 MGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDALGGAMAAATDEGGIQFRILNSS 60 Query: 87 KGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIR 146 KGPAVR R QADR LY+ A++ + +Q NL + Q V E + + V Q R Sbjct: 61 KGPAVRATRAQADRVLYKQAIRHRLENQPNLWLFQQAVDDLMVEGDRVVGAVTQVGVRFR 120 Query: 147 CSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDG 206 VVLT GTFL G IH+G GR GD + SL + + GRLKTGTP R+DG Sbjct: 121 ARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSSRLKELKLPQGRLKTGTPPRIDG 180 Query: 207 KTIIWDKTEKQFADERLIP-FSFMTDKITN-RQIECGITRTNLETHRIIMENIKHSAIYS 264 +TI + K E+Q D IP FSF+ + +Q+ C +T TN TH II + S +Y+ Sbjct: 181 RTIDFSKLEEQPGDLDPIPVFSFIGRAEQHPQQLPCWVTHTNERTHDIIRGGLDRSPMYT 240 Query: 265 GDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIR 324 G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T+ YPNGIST+LP ++Q + + Sbjct: 241 GVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLTTNEFYPNGISTSLPFDVQLELVH 300 Query: 325 TIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLV 384 ++ GLE+ +I+RPGYAIEYDY +P+ L +LETK I+GLF AGQINGTTGYEEAAAQGL+ Sbjct: 301 SMRGLEQAHILRPGYAIEYDYFDPRALKSSLETKAINGLFFAGQINGTTGYEEAAAQGLL 360 Query: 385 AGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADN 444 AGIN+ R + + + C R +Y+GV++DDL ++GV EPYRMFTSRAEYR+SLR DNAD Sbjct: 361 AGINAGRYAQEKEAWCPRRDQAYLGVLVDDLVTRGVSEPYRMFTSRAEYRLSLREDNADM 420 Query: 445 RLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNL---SSTSISFKQDGKT 501 RLT IG +LG + + R F + + L++ +T K L +T++ K Sbjct: 421 RLTEIGRELGVVDDVRWGAFNRKRDAVSRETERLRTTWVTPKTLPAEEATALLGKPIDHE 480 Query: 502 RTAYEFLSYPDFSIQNLFSI----C------PDARKFSSLVIERLQIESSYAAYTGRQMI 551 + E L P S + + + C D + + E+++I Y Y RQ Sbjct: 481 YSLAELLRRPGVSYEGVCELRNGECGPTEPLADDEILLAQIKEQIEIGIKYQGYIERQAG 540 Query: 552 EAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLI 611 E + E +P DY+ + LS E+ +KL+ +P + QAS+I G+TPAA++LL++ Sbjct: 541 EIERNGANENTRLPDGIDYTEVRGLSFEVSQKLNQFRPETIGQASRISGVTPAAISLLMV 600 Query: 612 YIKK 615 ++KK Sbjct: 601 HLKK 604 >gi|332824605|ref|XP_003311450.1| PREDICTED: protein MTO1 homolog, mitochondrial isoform 1 [Pan troglodytes] Length = 692 Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust. Identities = 283/630 (44%), Positives = 406/630 (64%), Gaps = 25/630 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA+ G+ T L+TH+ TIG MSCNP+ GG+GKGHL+RE+DAL Sbjct: 37 FDVIVIGGGHAGTEAATAAARCGSRTLLLTHRVDTIGQMSCNPSFGGIGKGHLMREVDAL 96 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGL R+ D +G+ ++VLN +KGPAV G R Q DR+LY+ MQ+EIL+ L V +G V Sbjct: 97 DGLCSRICDQSGVHYKVLNRRKGPAVWGLRAQIDRKLYKQNMQKEILNTPLLTVQEGAVE 156 Query: 126 GF--------NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 +T K +S +V+ D S + +V+LTTGTFLRG+I IG PAGR+GD Sbjct: 157 DLILTEPEPEHTGKCRVSGVVLVDGSTVYAESVILTTGTFLRGMIVIGLETHPAGRLGDQ 216 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR- 236 PS L + K F GRLKTGTP + ++I ++ K D +PFSF + + + Sbjct: 217 PSIGLAQTLEKLGFVVGRLKTGTPPPIAKESINFNILNKHIPDNPSVPFSFTNETVWIKP 276 Query: 237 --QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 Q+ C +T TN I+++N+ ++ + GPRYCPSIE K++RF R HQ++ Sbjct: 277 EDQLPCYLTHTNPRVDEIVLKNLHLNSHVKETTR--GPRYCPSIESKVLRFPNRL-HQVW 333 Query: 295 LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT 354 LEPEG+++D++YP G+S LP E+Q + I I GLEK +I+PGY ++YDY++P+++ P+ Sbjct: 334 LEPEGMDSDLIYPQGLSMTLPAELQEKMITCIRGLEKAKVIQPGYGVQYDYLDPRQITPS 393 Query: 355 LETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDD 414 LET + LF AGQINGTTGYEEAAAQG++AGIN++ + ++ SRT+ YIGV+IDD Sbjct: 394 LETHLVQRLFFAGQINGTTGYEEAAAQGVIAGINASLRVSRKPPFVVSRTEGYIGVLIDD 453 Query: 415 LTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMK-LGCIGERRQKRFAKYIQEYNF 473 LT+ G EPYRMFTSR E+R+SLRPDNAD+RLT G K GC+ ++R +R Sbjct: 454 LTTLGTSEPYRMFTSRVEFRLSLRPDNADSRLTLRGYKDAGCVSQQRYERACWMKSSLEE 513 Query: 474 LRSLLKSLVLTS----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA-RKF 528 S+LKS+ S K + SIS + R A + L Y + + +L P+ +K+ Sbjct: 514 GISVLKSIEFLSSKWKKLIPEASISTSRSLPVR-ALDVLKYEEVDMDSLAKAVPEPLKKY 572 Query: 529 SSL--VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLP--ALSNELKEKL 584 + + ERL+IE++Y + Q+ E K ++ +E +PKD DY ++ +LS+E++EKL Sbjct: 573 TKCRELAERLKIEATYESVLFHQLQEIKGVQQDEALQLPKDLDYLTIRDVSLSHEVREKL 632 Query: 585 SILKPFNLLQASKIEGMTPAALNLLLIYIK 614 +P + AS+I G+TPAA+ LL ++K Sbjct: 633 HFSRPQTIGAASRIPGVTPAAIINLLRFVK 662 >gi|310659880|ref|YP_003937601.1| glucose-inhibited cell-division protein [Clostridium sticklandii DSM 519] gi|308826658|emb|CBH22696.1| glucose-inhibited cell-division protein [Clostridium sticklandii] Length = 631 Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust. Identities = 268/624 (42%), Positives = 388/624 (62%), Gaps = 9/624 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDV+V+G GHAGCEAA +A+LG T ++T I + CNP+IGG GKGHLVREIDA Sbjct: 7 TYDVVVVGAGHAGCEAALASARLGMKTLVVTLSLDAIAFLPCNPSIGGTGKGHLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG D IQ R+LN KGPAV R Q D+ +Y + M++ + + NLD++ EV Sbjct: 67 LGGEMGLNTDKTFIQSRMLNTAKGPAVHSLRAQNDKNMYHMEMKKTLENTPNLDIVMDEV 126 Query: 125 AG-FNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 + E ++ ++ + +M V+L TG +L+ ++IG++ +G +G + ++ L Sbjct: 127 IEILHDEDKKVTGVLTKLRAMYEAKAVILATGVYLKSKVYIGEVNYSSGPIGLNSADGLT 186 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 S K R KTGTPAR+ +I + K E Q DE+++PFSFM D I Q+ C +T Sbjct: 187 ESLEKLGLPLRRFKTGTPARVHADSIDFSKMEVQHGDEKIVPFSFMNDYIGENQVVCYLT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 RT +TH II+ N+ SA+Y GD+ S GPRYCPSIEDK+VRF ++ HQ F+EPEGLNT Sbjct: 247 RTTPKTHEIILNNLGRSALYRGDMDSKGPRYCPSIEDKVVRFKDKETHQFFVEPEGLNTK 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 Y G S++L E+Q + T+ GLE ++RP YAIEYD I+P L P+LE K +SGL Sbjct: 307 EYYIQGFSSSLAYEVQLEMYHTVKGLENAKLMRPAYAIEYDCIDPLHLKPSLEIKDVSGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ NGT+GYEEAA+QGL+AGIN+ R + R++SYIGV+IDDL +KG EP Sbjct: 367 FSAGQFNGTSGYEEAASQGLIAGINAVRHIKDEEPFILDRSESYIGVLIDDLVTKGTNEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT G ++G + + +R+ K+I + + + LK L + Sbjct: 427 YRIMTSRAEYRLLLRQDNADLRLTEKGREVGLVTD---ERYEKFITKKTQIDAELKRLKI 483 Query: 484 TSKNLSSTSISFKQDG-----KTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 + ++ G +T YEFL + + L + ++ SS VIE+ +I Sbjct: 484 EKVKPDEANPLLEEMGASPLSRTLPLYEFLKRTEVNYTVLDKLEKGNKELSSQVIEQCEI 543 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 Y Y +Q+ + + K EK+ +P+ DY ++ L E ++KL+ +KPFN+ QAS+I Sbjct: 544 TVKYEGYIKKQLDQVESFKKLEKKKLPETLDYETISGLRIEARQKLNEIKPFNIGQASRI 603 Query: 599 EGMTPAALNLLLIYIKKNTVKLNE 622 G++PA +++LLIY++ K E Sbjct: 604 SGVSPADISVLLIYMQTQKAKSKE 627 >gi|225181152|ref|ZP_03734598.1| glucose inhibited division protein A [Dethiobacter alkaliphilus AHT 1] gi|225168121|gb|EEG76926.1| glucose inhibited division protein A [Dethiobacter alkaliphilus AHT 1] Length = 627 Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust. Identities = 271/614 (44%), Positives = 371/614 (60%), Gaps = 5/614 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 Y V+VIG GHAG EAA +A++G T L+T + M CNPAIGG KGHLVRE+DAL Sbjct: 8 YHVVVIGAGHAGSEAALASARMGCKTLLLTLNLDAVALMPCNPAIGGPAKGHLVREVDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+V D IQ R+LN KGPAV R QAD+ +Y+ M+ + + NLD+ Q V Sbjct: 68 GGEMGKVIDRTKIQIRMLNTAKGPAVHALRAQADKWVYQREMRTVLENTPNLDLQQATVE 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 F + I ++ Q+ +M + VVLT GT+LRG I +G G G S L Sbjct: 128 RFQVKGGRIRGVITQNGTMYKTQAVVLTAGTYLRGRIIVGASMTAGGPNGQLASTKLSGY 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + + R KTGTP R+ +I + KT Q DE FSF + C +T T Sbjct: 188 LKRIGLELLRFKTGTPPRIHRDSIDFSKTVIQPGDEDPFSFSFAQVPPKIESVPCWLTHT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 ETHR+I EN+ S +Y+GDI+ GPRYCPSIEDK+VRF ER HQ+FLEPEG NT Sbjct: 248 TEETHRVIQENLHRSPLYAGDIEGVGPRYCPSIEDKVVRFSERPSHQVFLEPEGRNTAEF 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+ST+LPE++Q ++TIPGLE V I+RPGYAIEYD I+P +L PT+ETK ++GLF Sbjct: 308 YVQGMSTSLPEDVQRAMLKTIPGLENVLIMRPGYAIEYDCIDPLQLKPTMETKTVAGLFS 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQING++GYEEAAAQG+VAGIN+A + R+ +YIGV+IDDL +KG EPYR Sbjct: 368 AGQINGSSGYEEAAAQGIVAGINAALTFKGQPPLHIDRSMAYIGVLIDDLVTKGTSEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYI----QEYNFLRSLLKSL 481 M TSRAEYR+ LR DNAD RLTP+G + G + E R ++F + +E L S+ S Sbjct: 428 MMTSRAEYRLLLRQDNADLRLTPLGHRAGLVSEERFQKFQEKCRAVEEEIERLNSVNISP 487 Query: 482 VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +L S G A + L P+ + + I + + S +++I+ Sbjct: 488 AAAVNDLLQEKGSKPLSGPV-AAGQLLKRPELTYDAIIHILGEEHRLSGEAARQVEIQIK 546 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y +Q+ + ++ K E + +P+D Y L LS E EKL ++P ++ QAS+I G+ Sbjct: 547 YQGYIEKQLQQIEKYKKMENKALPEDLPYCDLDGLSTEAVEKLMKIRPRSVGQASRISGV 606 Query: 602 TPAALNLLLIYIKK 615 +PA + +LL+Y+++ Sbjct: 607 SPADIAVLLVYMEQ 620 >gi|167462791|ref|ZP_02327880.1| glucose inhibited division protein A [Paenibacillus larvae subsp. larvae BRL-230010] gi|322381367|ref|ZP_08055370.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321154943|gb|EFX47214.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 631 Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust. Identities = 271/614 (44%), Positives = 381/614 (62%), Gaps = 6/614 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAGCE+A AA++G ST L+T + M CNP+IGG KGH+VREIDAL Sbjct: 8 YDVIVIGAGHAGCESALAAARMGCSTLLLTINLDMVAFMPCNPSIGGPAKGHVVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MGR D IQ R+LN KGPAV R QAD+ LY+ M+ I Q NL + QG V Sbjct: 68 GGEMGRNIDKTYIQMRMLNTGKGPAVHALRAQADKFLYQQTMKETIEKQPNLTMRQGMVE 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + ++ + + +VLTTGT+LRG + +G+L +G PS L S Sbjct: 128 ELIVEAGVCKGVITKSGAEYYGKAIVLTTGTYLRGKVIMGELMYESGPNNQQPSIKLSES 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNRQIECGITR 244 F+ R KTGTP R+ ++I + KTE Q D FS+ T + + Q+ C +T Sbjct: 188 LRNLGFELVRFKTGTPPRVHKESIDFSKTEIQPGDAEPEFFSYETREPVKEEQLPCWLTY 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ET +I EN+ + ++SG I+ GPRYCPSIEDKIVRF ++ HQIFLEPEG T Sbjct: 248 TSAETQELITENLHRAPMFSGVIEGTGPRYCPSIEDKIVRFADKPKHQIFLEPEGRYTSE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 Y G+ST++PE++Q +RTIPGLE V ++R GYAIEYD + P +L PTLETK + GLF Sbjct: 308 YYVQGLSTSMPEDVQLSMLRTIPGLECVEMMRTGYAIEYDAVIPTQLKPTLETKLVEGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QG++AGIN+ARK + I R++ YIGV+IDDL +KG EPY Sbjct: 368 TAGQINGTSGYEEAAGQGIMAGINAARKVQGKEPIILDRSEGYIGVLIDDLVTKGTNEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF----AKYIQEYNFLRSLLKS 480 R+ TSRAEYR+ LR DNAD RLTPIG ++G I E R + F K QE LR+ Sbjct: 428 RLLTSRAEYRLLLRHDNADLRLTPIGYEIGLITEERYQAFLNKKGKVEQEIERLRTTKVR 487 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 ++L + + + + + L P ++ + P + + E+++I+ Sbjct: 488 PEAFIQDLLAEAGTVQLNNAV-DLLSLLRRPQIMYSHIEQMSPSPLELDGEMKEQVEIQI 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y+ Y+ +Q+ + + +K EK+LIP D Y + ++ E K+KL+ ++P ++ QAS+I G Sbjct: 547 KYSGYSEKQLAQVERLKKMEKKLIPDDIVYEEIHGIATEAKQKLAKIRPISIGQASRISG 606 Query: 601 MTPAALNLLLIYIK 614 ++PA +++LL+Y++ Sbjct: 607 VSPADISILLVYLE 620 >gi|331268195|ref|YP_004394687.1| glucose inhibited division protein A [Clostridium botulinum BKT015925] gi|329124745|gb|AEB74690.1| glucose inhibited division protein A [Clostridium botulinum BKT015925] Length = 630 Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust. Identities = 265/618 (42%), Positives = 389/618 (62%), Gaps = 13/618 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DV VIG GHAGCEAA +A+LG +T + +++ M+CNP IGG KGHLVREIDAL Sbjct: 8 FDVAVIGAGHAGCEAALASARLGINTIVFATDLASVAMMACNPNIGGTAKGHLVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG D IQ R+LN KGPAV R QAD++ Y M+ + + ENL + Q EV Sbjct: 68 GGEMGINIDHTYIQSRMLNTSKGPAVHSLRAQADKKKYSERMKHVLETTENLQLKQAEVI 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + E + ++ ++ + R +L TG +L+ I IG + G G +P+N L S Sbjct: 128 EVDIENGKVKGVLTKNGAYYRVKAAILCTGVYLKSRIIIGDINYEGGPSGLAPANMLSQS 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + R KTGTPAR++ K++ + K +Q D+ ++PFSFM++ I QI C +T + Sbjct: 188 LIDSGIKLTRFKTGTPARINRKSVDFSKMIEQKGDDDIVPFSFMSENIEREQISCYLTYS 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 ET ++++ENI S +Y+G IKS GPRYCPS EDKI+RF E++ HQIF+EPEG NT+ + Sbjct: 248 GDETKKVVLENIDRSPLYNGSIKSVGPRYCPSFEDKIMRFPEKDKHQIFIEPEGENTEEL 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+S++LPE++Q + +R++PGLE ++R YAIEYD I+P +L +LE K+I GLF Sbjct: 308 YVGGMSSSLPEDVQIKMLRSVPGLENAEMMRTAYAIEYDCIDPTQLELSLEFKEIDGLFS 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ+NG++GYEEA QGL+AGIN+A K + R+D+YIGV+IDDL +KG EPYR Sbjct: 368 AGQMNGSSGYEEAGCQGLIAGINAALKLKGEKPLILKRSDAYIGVLIDDLITKGTQEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 M TSRAEYR+ LR DNAD RLT +G K+G + + R +F K + LKS+ +T+ Sbjct: 428 MMTSRAEYRLLLRQDNADLRLTEMGRKIGLVKDERYNKFTKRKNDIESEIERLKSIQITN 487 Query: 486 K--------NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 K N++S+++ K + YE + P+ + + + + K V E++ Sbjct: 488 KQEVNKFLENINSSALK-----KPISLYELIKRPELNYFVVEELDDNRPKLPRDVQEQVN 542 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I S Y Y +Q+ + + K E RLIPK+FDY+ + L E +KL +KP ++ QAS+ Sbjct: 543 IISKYEGYIQKQLEQVDQFKKLENRLIPKEFDYTEVKGLRKEAIQKLDKIKPVSIGQASR 602 Query: 598 IEGMTPAALNLLLIYIKK 615 I G++PA +++LLI +++ Sbjct: 603 ISGVSPADISVLLIVLEQ 620 >gi|119489483|ref|ZP_01622244.1| glucose-inhibited division protein A [Lyngbya sp. PCC 8106] gi|119454562|gb|EAW35709.1| glucose-inhibited division protein A [Lyngbya sp. PCC 8106] Length = 638 Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust. Identities = 271/614 (44%), Positives = 375/614 (61%), Gaps = 5/614 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D++V+GGGH+GCEAA +A+LG T ++T I CNPA+G K L E+DAL Sbjct: 13 FDIVVVGGGHSGCEAALASARLGCRTLMLTLNLDKIAWQPCNPAVGAPAKSQLTHEVDAL 72 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G +G++AD +Q R+LN +GPAV R Q D+ Y MQ I +QENL + +G V Sbjct: 73 GGEIGKMADRTYLQKRLLNNSRGPAVWALRAQTDKREYAAVMQNIIENQENLAIREGMVT 132 Query: 126 GFNT-EKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + I + + +C V+LTTGTFL GVI +G + AGR G+ + L + Sbjct: 133 DVVLGENDEIIGVKTYFDVAFKCKAVILTTGTFLGGVIWVGNKSMSAGRAGEFAAVGLTD 192 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGIT 243 + K F+TGRLKTGTPAR+D +++ + + E Q DE + FSF + R Q+ C +T Sbjct: 193 TLNKLGFETGRLKTGTPARVDKRSVNYSQLEPQPGDEEVRWFSFDPEVWVEREQMCCYLT 252 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 RT ETHRII EN+ S +Y G +++ GPRYCPSIEDKIVRF ++ HQIF+EPEG N Sbjct: 253 RTTAETHRIIRENLHLSPVYGGWVEAKGPRYCPSIEDKIVRFADKESHQIFIEPEGRNIP 312 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G ST LPE +Q Q +R++PGLEK ++RP YA+EYDY+ + +PTL TK+I GL Sbjct: 313 ELYIQGFSTGLPERLQLQMLRSLPGLEKCTMLRPAYAVEYDYLPATQCYPTLMTKRIEGL 372 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQG+VAGIN+AR S + I F R SY+G +IDDL +K + EP Sbjct: 373 FCAGQINGTTGYEEAAAQGIVAGINAARFSRNQEMIIFPREGSYLGTLIDDLCTKDLREP 432 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRM TSR+EYR+ LR DNAD RLTP+G ++G I +RR + F + L S + Sbjct: 433 YRMLTSRSEYRLLLRSDNADQRLTPLGREIGLIDDRRWQLFEHKQANIIAEKERLHSTRI 492 Query: 484 TSKNLSSTSISFKQDGKTR---TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 ++ +I K + T + L P F NL S+ E +IE Sbjct: 493 KERDEVGMAIVSDTQQKIKGSITLADLLRRPGFHYVNLERYNLGNPDIDSVEKEGAEIEV 552 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y+ Y RQ + +I R +P++ +Y + LS E +EKL+ ++P + QAS+I G Sbjct: 553 KYSGYLQRQQNQIDQISRHANRKLPENINYMMIETLSMESREKLTKVRPLTIGQASRIGG 612 Query: 601 MTPAALNLLLIYIK 614 + PA +N LLIY++ Sbjct: 613 VNPADVNALLIYLE 626 >gi|120602377|ref|YP_966777.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Desulfovibrio vulgaris DP4] gi|166222930|sp|A1VD34|MNMG_DESVV RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|120562606|gb|ABM28350.1| glucose inhibited division protein A [Desulfovibrio vulgaris DP4] Length = 629 Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust. Identities = 275/621 (44%), Positives = 368/621 (59%), Gaps = 19/621 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD IV+G GHAGCEAA A++G +T L+T IG +SCNPAIGGL KGH+V+EIDAL Sbjct: 13 YDCIVVGAGHAGCEAAMALARMGHATLLLTGNADRIGHLSCNPAIGGLAKGHMVKEIDAL 72 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+MG AD AGIQFR LN KGPAVR R Q DR+ Y ++R+I +Q NL V Q Sbjct: 73 GGMMGLWADEAGIQFRTLNSSKGPAVRATRAQIDRDAYLRVVRRDIFAQPNLRVWQDMAE 132 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + R V+LTTGTFL+G IH+G P GR+GD+P+ L S Sbjct: 133 SIIVEGGRAAGVRTAYGQEFRAHHVLLTTGTFLQGRIHVGLNNFPGGRLGDAPATGLSAS 192 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + GRLKTGT RL +I + E Q D+ PFSF + Q+ C +T T Sbjct: 193 LRAIGLELGRLKTGTTPRLLRDSIDFSLMEVQPPDDPPRPFSFRGPGVRLPQLPCHVTWT 252 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N TH I S +++G IK G RYCPSIEDK+ RF E+ HQ+F+EPEGL + Sbjct: 253 NERTHEAIRAGFDRSPMFTGVIKGTGARYCPSIEDKVARFPEKERHQVFVEPEGLESPEC 312 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YPNGI T+LP E+Q I TIPGLE I+RPGYAIEYDY +P +L TLETK + GL+L Sbjct: 313 YPNGIPTSLPLEVQKAMIATIPGLENAQIVRPGYAIEYDYADPVQLRSTLETKALRGLWL 372 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGT+GYEEAAAQGL A +N + + R +Y+ V++DDL +KG EPYR Sbjct: 373 AGQINGTSGYEEAAAQGLWAALNVSCTLRSMPPFLPGRDTAYMAVLVDDLVTKGTREPYR 432 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAE+R+ LR +NAD RLT G LG + + +RF+ R+ L SL+ Sbjct: 433 MFTSRAEHRLLLRENNADARLTETGRALGLVDDTHWQRFSTK-------RAALHSLLDEL 485 Query: 486 KNLSSTSISFKQDGKTR----------TAYEFLSYPDFSIQNLFSICPDARKFSSLVIER 535 +N T + +D +R + + L P ++ +L +F+ V E Sbjct: 486 ENRRITPDAAARDIFSRLGEPAPTKGVSLADILRRPSLTLPDLAPFWEGVTRFADDVREE 545 Query: 536 LQIESSYAAYTGRQM-IEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 + Y+ Y RQ + A+ + E+ ++P+D DY+ +P L+ E+ EKL ++P L Q Sbjct: 546 AETIVKYSGYLARQQELVARSARMEDT-VLPEDMDYTVIPGLTREIVEKLGKVRPHTLGQ 604 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 A++I G+TPAAL L I ++K Sbjct: 605 AARISGVTPAALTCLEIQLRK 625 >gi|220905196|ref|YP_002480508.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869495|gb|ACL49830.1| glucose inhibited division protein A [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 660 Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust. Identities = 281/649 (43%), Positives = 379/649 (58%), Gaps = 39/649 (6%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++D IV GGGHAGCEAA A++G S LI+ +G +SCNPAIGGL KGH+ REIDA Sbjct: 9 TFDCIVAGGGHAGCEAAVALARMGHSVLLISGNLDRLGYLSCNPAIGGLAKGHMAREIDA 68 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G+MG ADAAGIQFR+LN+ KGPAVR R Q DR +Y+ +Q+ + S L + Q V Sbjct: 69 LGGMMGLWADAAGIQFRMLNMSKGPAVRATRAQMDRLVYQRVVQQTLYSTPGLRIWQDSV 128 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + + + V+LTTGTFL G IH+G IP GR+GD+P+ L + Sbjct: 129 IEITAGDSRATGVRTAQGLEFSARHVLLTTGTFLDGRIHMGLTSIPGGRLGDAPALGLSD 188 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S F+ GRLKTGT RL +I + E+Q D+ FSF Q+ C +T Sbjct: 189 SLRTLGFELGRLKTGTTPRLLKSSINYAVLEEQKGDDPAPAFSFHGPGPVLPQVPCHVTW 248 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN + H II S +++G IK G RYCPSIEDKI RF +R HQIFLEPEGL++ Sbjct: 249 TNEQAHEIIRSGFDRSPMFTGVIKGTGARYCPSIEDKIARFPDRERHQIFLEPEGLDSAE 308 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY NGIST+LP ++Q I +PGLE ++RPGYAIEYD+ +P +L PTLE+K + GL+ Sbjct: 309 VYANGISTSLPLDVQIGMIHAVPGLENAVMLRPGYAIEYDFSDPVQLMPTLESKAVPGLW 368 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGT+GYEEAAAQGL A +N + + ++ R ++Y+ V++DDL + G EPY Sbjct: 369 LAGQINGTSGYEEAAAQGLWAALNISCRLREMPPFLLGRDEAYMAVLVDDLVTSGTQEPY 428 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL- 483 RMFTSRAE+R+ LR DNAD RLTP G +LG + + F + N LRS L+ + Sbjct: 429 RMFTSRAEHRLLLREDNADTRLTPHGRQLGLVNDAHWDAFCRKQDAANRLRSGLEQKRIP 488 Query: 484 --------------TSKNLSSTSISFKQDGKT------RTAYEFLSYPDFSIQNLFSI-- 521 + ++ + + GKT RT E L P+ + L ++ Sbjct: 489 APGRGSLADGPATDSGQDKGTVTTGMSATGKTADLPVGRTLAEALRRPELDLHGLAALLR 548 Query: 522 ---CPD---ARKF--------SSLVIERLQIESSYAAYTGRQM-IEAKEIKFEEKRLIPK 566 C D A +F + V E +Q E YA Y RQ + A+ K E L P Sbjct: 549 SCACEDTAAAAEFLEHEMALAGAGVCESVQTEIKYAGYLSRQRELVARAAKLESTAL-PP 607 Query: 567 DFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 D DY+++ LS E+ EKL ++P +L QA +I G+TPAA+ L I++ K Sbjct: 608 DLDYATVAGLSREVTEKLDRVRPLSLGQAGRISGVTPAAVGCLEIHLHK 656 >gi|113869584|ref|YP_728073.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ralstonia eutropha H16] gi|123133494|sp|Q0K5L6|MNMG_RALEH RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|113528360|emb|CAJ94705.1| NAD/FAD-utilizing enzyme apparently involved incell division [Ralstonia eutropha H16] Length = 652 Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust. Identities = 284/627 (45%), Positives = 386/627 (61%), Gaps = 15/627 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNP+IGG+GKGHLV+E+D Sbjct: 5 KEFDVIVVGGGHAGTEAALAAARMGCQTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 A+ G M D +GIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q Sbjct: 65 AMGGAMAAATDESGIQFRILNSSKGPAVRATRAQADRVLYRKAIRTRLENQPNLMLFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + + + Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 125 VDDLMVEGDRVVGAMTQVGIAFRARAVVLTAGTFLDGKIHVGLDNYTGGRAGDPAAVSLS 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQIECG 241 GRLKTGTP R+DG+TI + E+Q D +P FSF+ + +Q+ C Sbjct: 185 ARLKDLKLPQGRLKTGTPPRIDGRTIDFSVMEEQPGDLDPVPVFSFLGRPEQHPQQLPCW 244 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPEGL Sbjct: 245 ITHTNSRTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFATKESHQIFLEPEGLT 304 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ YPNGIST+LP ++Q + + +I G+E +I+RPGYAIEYDY +P+ L +LE+K IS Sbjct: 305 TNEFYPNGISTSLPFDVQLELVHSIRGMENAHILRPGYAIEYDYFDPRGLKASLESKAIS 364 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQINGTTGYEEAAAQGL+AGIN+ + D R +Y+GV++DDL ++GV Sbjct: 365 GLFFAGQINGTTGYEEAAAQGLLAGINAGCYVRERDAWTPRRDQAYLGVLVDDLITRGVT 424 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAE+R+SLR DNAD RLT +G +LG + + R F + + LKS Sbjct: 425 EPYRMFTSRAEFRLSLREDNADMRLTEVGRELGVVDDARWDAFNRKRDAVSRETERLKST 484 Query: 482 VLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI-----CP----DARK-F 528 + L + + K + + + L P+ + L ++ P DA Sbjct: 485 WVNPAMLPGEDAVPLLGKPIEREYSLADLLRRPEVRYEALMALQGGRHAPETPLDAEPML 544 Query: 529 SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 + + E+++I Y Y RQ E +++ E +P+ DY+ + L E+ +KL+ + Sbjct: 545 AEQIREQIEIGIKYHGYIARQAAEVDKLEANESTRLPEGLDYTEVRGLGFEVSQKLNQHR 604 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIKK 615 P L QAS+I G+TPAA++LLL+++KK Sbjct: 605 PETLGQASRISGVTPAAISLLLVHLKK 631 >gi|237742804|ref|ZP_04573285.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG 2 [Fusobacterium sp. 4_1_13] gi|229430452|gb|EEO40664.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG 2 [Fusobacterium sp. 4_1_13] Length = 633 Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust. Identities = 274/630 (43%), Positives = 381/630 (60%), Gaps = 21/630 (3%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +D+IV+G GHAGCEAA +A++G TA+ T TIG MSCNP++GG K HL REID Sbjct: 2 QEFDIIVVGAGHAGCEAALASARMGMKTAIFTISLDTIGVMSCNPSLGGPAKSHLAREID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G MGR D IQ RVLN +KGPAVR R QAD+ Y M++ + +NL VIQG Sbjct: 62 ALGGEMGRNIDKTFIQIRVLNTRKGPAVRSLRAQADKMAYANEMKKTLEHTDNLSVIQGM 121 Query: 124 VAGFNTE----KNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 V+ E K +I I +++ R V++ TGTFLRG+IHIG++ AGRMG+ S Sbjct: 122 VSELVVEEENGKKVIKGIKIREGLEYRAKAVIIATGTFLRGLIHIGEINFSAGRMGELSS 181 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADE-RLIPFSFMT---DKITN 235 L S K GR KTGTP R+DG+TI + E+Q D+ +++ FS T D + Sbjct: 182 EDLPLSLEKIGLKLGRFKTGTPTRIDGRTIDYSVLEEQPGDKSQVLKFSNRTKDEDALNR 241 Query: 236 RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFL 295 RQI C I TN + H+II + S +++G I+ GPRYCPSIEDKI R+ ++N H +FL Sbjct: 242 RQIPCYIAHTNEKVHKIIRNAKERSPLFNGTIQGLGPRYCPSIEDKIFRYPDKNQHHLFL 301 Query: 296 EPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTL 355 E EG T+ +Y G+S++LP ++Q + ++ I G E I+R YAIEYDY+ P+E+ TL Sbjct: 302 EREGYETNEIYLGGLSSSLPVDVQEEMLKNIKGFENAKIMRYAYAIEYDYVPPEEIKYTL 361 Query: 356 ETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDL 415 E++ + LFLAGQINGT+GYEEA AQGL+AGIN+ RK + + R DSYIG +IDDL Sbjct: 362 ESRTVENLFLAGQINGTSGYEEAGAQGLMAGINAVRKLRNEEPVILDRADSYIGTLIDDL 421 Query: 416 TSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLR 475 SKG EPYRMFT+R+EYR+ LR DNAD RLT +G +LG + E +R K ++ + Sbjct: 422 VSKGTNEPYRMFTARSEYRLYLREDNADLRLTKLGYELGLVPEEEYQRVEKKRKDVKIIT 481 Query: 476 SLLKSLVLTSKNLSSTSISFK------QDGKTRTAYEFLSYPDFSIQNLFSICP-----D 524 +L + N I K +DG T E L P+ + +++ I D Sbjct: 482 EILAKTNVGPSNPRVNEILLKRGESPIKDGS--TLLELLRRPEVTFEDIKYISEEIKGLD 539 Query: 525 ARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKL 584 + + +++I Y Y R + ++ K E + IP D DY L + E K+KL Sbjct: 540 LKGYDHDTTYQVEITVKYEGYINRALKMIEKHKSMENKKIPVDIDYDDLKTIPKEAKDKL 599 Query: 585 SILKPFNLLQASKIEGMTPAALNLLLIYIK 614 +KP N+ QAS+I G++PA + +LIY+K Sbjct: 600 KRIKPINIGQASRISGVSPADIQAILIYLK 629 >gi|238926047|ref|YP_002939565.1| glucose-inhibited division protein A [Eubacterium rectale ATCC 33656] gi|238877724|gb|ACR77431.1| glucose-inhibited division protein A [Eubacterium rectale ATCC 33656] Length = 646 Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust. Identities = 270/631 (42%), Positives = 384/631 (60%), Gaps = 26/631 (4%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + +YDV+V+G GHAGCEAA A+LG T + T +I M CNP IGG KGHLVR Sbjct: 5 FVEENYDVVVVGAGHAGCEAALACARLGLETIVFTVSVDSIALMPCNPNIGGSSKGHLVR 64 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G MG+ D IQ ++LN KGPAV R QAD+ Y + M++ + + ++L + Sbjct: 65 EIDALGGEMGKNIDKTFIQSKMLNKSKGPAVHSLRAQADKAEYSMEMRKTLQNTDHLTIR 124 Query: 121 QGEVAGFNT-EKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 QGEV+ T E N I ++ C +VL TGT+LR G++ G G + Sbjct: 125 QGEVSEIVTDENNNIVGAKTTSGALYHCKAIVLCTGTYLRARCLTGEMITHTGPNGLLAA 184 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KITNRQ 237 N L S + + R KTGTPAR+D +++ + K E+QF D+R++PFSF TD + Q Sbjct: 185 NHLTQSLIDHGIEMRRFKTGTPARVDKRSLDFSKMEEQFGDDRVVPFSFTTDPESVQIDQ 244 Query: 238 IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 + C +T TN +TH II N+ S IY+G I+ GPRYCPSIEDK+V+F E+ HQIF+EP Sbjct: 245 VSCWLTYTNSKTHEIIRNNLDRSPIYAGIIEGTGPRYCPSIEDKVVKFAEKERHQIFIEP 304 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EGLNT+ +Y G+S+++PE++Q++ RT+PGLE V I+R YAIEYD IN +L+ +LE Sbjct: 305 EGLNTNEMYVGGMSSSMPEDVQYEMYRTLPGLENVKIVRDAYAIEYDCINANQLYASLEF 364 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 KKI GLF GQ NG++GYEEAA QGL+AGIN+A K + R+++YIGV+IDDL + Sbjct: 365 KKIHGLFSGGQFNGSSGYEEAACQGLIAGINAAMKILGKKPLILDRSEAYIGVLIDDLVT 424 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL 477 K EPYRM TSRAEYR+ LR DNAD RLT G ++G I + R Y+++ Sbjct: 425 KKNREPYRMMTSRAEYRLLLRQDNADLRLTEKGYEVGLISKER----------YDYVCKK 474 Query: 478 LKSLVLTSKNLSSTSISFKQD-------------GKTRTAYEFLSYPDFSIQNLFSICPD 524 + + + +S +I + D T E + P+ L I PD Sbjct: 475 KELIDKEIERVSHVNIGARADVQEILKKYNSIELSNGTTLEELIRRPELDYDKLAPIDPD 534 Query: 525 ARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKL 584 K S E++ I YA Y RQ+ + K EK+L+P DFDY+++ L E ++KL Sbjct: 535 RPKLSDDTREQINILIKYAGYISRQIKQVSHFKKLEKKLLPTDFDYNTISGLRIEAQQKL 594 Query: 585 SILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 + +P ++ QAS+I G+TPA +++LL+++++ Sbjct: 595 NEFQPLSIGQASRISGVTPADISVLLVFLEQ 625 >gi|237738381|ref|ZP_04568862.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG 2 [Fusobacterium mortiferum ATCC 9817] gi|229420261|gb|EEO35308.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG 2 [Fusobacterium mortiferum ATCC 9817] Length = 627 Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust. Identities = 275/626 (43%), Positives = 386/626 (61%), Gaps = 21/626 (3%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+G GHAGCEAA +A++GA TA+ T IG MSCNP+IGG K HLV+EIDA Sbjct: 3 NFDVIVVGAGHAGCEAALSSARMGAKTAIFTITLDNIGVMSCNPSIGGPAKSHLVKEIDA 62 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D +Q RVLN KKGPAVR R QAD+ Y M++ + + NL IQG V Sbjct: 63 LGGEMGRNIDKTFVQIRVLNTKKGPAVRALRAQADKVKYAKEMKKTLENCPNLSTIQGMV 122 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E I + +++ R V+L TGTF+RG+IHIG+ GRMG+ S+ L Sbjct: 123 TDLVIEDGKIIGVKIREGVEYRAKMVILATGTFMRGLIHIGQNHFSGGRMGELSSDDLPL 182 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNR-QIECG 241 S K GR KTGTP+R+D +TI + K E+Q DE L+ FS T ++I NR QI C Sbjct: 183 SLEKAGIKLGRFKTGTPSRIDARTIDFSKVEEQPGDEELLKFSSRTSDEEIKNREQISCY 242 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 I TN + H II N S +++G I+ GPRYCPSIEDK+ R+ ++N H +FLE EG Sbjct: 243 IAHTNEKVHEIIKSNKHRSPLFNGTIQGTGPRYCPSIEDKVFRYEDKNQHHLFLEREGSE 302 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ +Y G+S++LP ++Q ++ I GLE +I+R YAIEYDYI P+E+ +LE++ + Sbjct: 303 TNEIYLGGLSSSLPTDVQEGMLKNISGLEDAHIMRYAYAIEYDYIPPQEIKYSLESRTVE 362 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 LFLAGQINGT+GYEEA AQGL+AGIN+ RK + + R DSYIG +IDDL +KG Sbjct: 363 NLFLAGQINGTSGYEEAGAQGLMAGINAVRKLQGKEPVILDRADSYIGTLIDDLVTKGTN 422 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFT+R+EYR+ LR DNAD RL+ IG ++G + E +R K ++ +++ L Sbjct: 423 EPYRMFTARSEYRLLLREDNADLRLSKIGYEIGLLPEEEYRRVQKKEKDVEEIKAKLMEN 482 Query: 482 VLTSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIE-- 534 + N + ++ G+T T +E L P + Q++ I + S + IE Sbjct: 483 YVGPSNPRVNEV-LEKRGETPLKDGVTYFELLRRPSVTFQDIKYIS----ELSDMKIEDY 537 Query: 535 ------RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 +++++ Y+ Y R M ++ K E + IP D DY +L + E K+KL + Sbjct: 538 CRDTEYQVEVQVKYSGYIERSMKMIEKHKSLENKKIPADLDYDTLENIPKEAKDKLKAAR 597 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIK 614 P N+ QAS+I G++PA + +LLIY+K Sbjct: 598 PLNIGQASRISGVSPADIQVLLIYLK 623 >gi|209525128|ref|ZP_03273672.1| glucose inhibited division protein A [Arthrospira maxima CS-328] gi|209494537|gb|EDZ94848.1| glucose inhibited division protein A [Arthrospira maxima CS-328] Length = 637 Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust. Identities = 271/619 (43%), Positives = 377/619 (60%), Gaps = 15/619 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +++IV+GGGH+GCEAA +A+LG T L+T IG CNPA+G K L E+DAL Sbjct: 13 FEIIVVGGGHSGCEAALASARLGCRTLLLTLNLDKIGWQPCNPAVGAPAKSQLTHEVDAL 72 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G +G++AD +Q R+LN +GPAV R Q D+ Y M++ + +QENL + +G V Sbjct: 73 GGEIGKMADRTYLQKRLLNNSRGPAVWALRAQTDKREYAAVMRQIVENQENLSIREGMVT 132 Query: 126 ----GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G N E I + C ++LTTGTFL G+I +G +PAGR G+ + Sbjct: 133 DLVLGLNDE---IIGVKTYFGVAFACKALILTTGTFLGGIIWVGNKSMPAGRAGEFAAVG 189 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIEC 240 L ++ + F+TGRLKTGTPAR+D +++ + E Q DER+ FSF + R Q+ C Sbjct: 190 LTDTLNRLGFETGRLKTGTPARVDKRSVDYSNLEPQPGDERVRWFSFDPEVWVEREQMNC 249 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +TRT ETHR+I EN+ S +Y G + + GPRYCPSIEDKIVRF ++ HQIF+EPEG Sbjct: 250 YLTRTTAETHRLIRENLHLSPVYGGWVDAKGPRYCPSIEDKIVRFADKESHQIFIEPEGR 309 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + +Y G ST LPE++Q + +R++PGLE ++RP YA+EYDY+ + +PTL TKKI Sbjct: 310 HIPELYIQGFSTGLPEKLQLEMLRSLPGLENCVMLRPAYAVEYDYLPATQCYPTLMTKKI 369 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQINGTTGYEEAAAQG+VAGIN+ + D I F R SYIG +IDDL +K + Sbjct: 370 EGLFCAGQINGTTGYEEAAAQGIVAGINAVKLVRGEDMIVFPREQSYIGTLIDDLCTKDL 429 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRM TSR+EYR+ LR DNAD RLTP+G ++G I +RR + F + ++ N + + Sbjct: 430 REPYRMLTSRSEYRLLLRSDNADRRLTPLGREIGLIDDRRWELFQQ--KQANIIAEKQRL 487 Query: 481 LVLTSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIER 535 K I+ D + + + E L P F NL + S E Sbjct: 488 DQTRVKERDEIGIAIASDTQQKIKGSISLAELLRRPGFHYGNLEHYHLGNSQLSLEEKEG 547 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 +IE Y+ Y RQ + +I R +P+D DY ++ LS E +EKL+ +KP + QA Sbjct: 548 AEIEIKYSGYMERQQNQIDQISRHANRQLPRDLDYLTIETLSMESREKLNRIKPLTIGQA 607 Query: 596 SKIEGMTPAALNLLLIYIK 614 S+I G+ PA +N LLIY++ Sbjct: 608 SRIGGVNPADINALLIYLE 626 >gi|255505831|ref|ZP_05348360.3| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bryantella formatexigens DSM 14469] gi|255265688|gb|EET58893.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bryantella formatexigens DSM 14469] Length = 627 Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust. Identities = 272/629 (43%), Positives = 379/629 (60%), Gaps = 25/629 (3%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALD 66 D++V+G GHAGCEAA A+LG T + T +I M CNP IGG KGHLVREIDAL Sbjct: 9 DIVVVGAGHAGCEAALACARLGLETIMFTVSVDSIALMPCNPNIGGSSKGHLVREIDALG 68 Query: 67 GLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAG 126 G MG+ D IQ ++LN KGPAV R QAD++ Y M++ + + E+L + Q EV Sbjct: 69 GEMGKNIDKTFIQSKMLNKSKGPAVHSLRAQADKKDYSYQMRKTLENTEHLTIKQAEVTE 128 Query: 127 FNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSF 186 + + + ++ C +L TGT+LR G + G G +N L +S Sbjct: 129 IIVQDGTLKGVKTFSGAVYYCRACILCTGTYLRARCIYGDVSNYTGPNGLQAANHLTDSL 188 Query: 187 MKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KITNRQIECGITR 244 + R KTGTPAR+DG+TI + K E+Q+ DER++PFSF TD ++ Q+ C +T Sbjct: 189 KEHGIAMYRFKTGTPARIDGRTIDYSKMEEQYGDERVVPFSFSTDPEEVQIDQVSCWLTY 248 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH II EN+ S +YSG I+ GPRYCPSIEDK+V+F ++N HQ+F+EPEG T+ Sbjct: 249 TNEKTHEIIRENLDRSPLYSGMIEGTGPRYCPSIEDKVVKFADKNRHQVFIEPEGRYTNE 308 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+S++LPE++Q R++PGLEK I+R YAIEYD I+ ++L+PTLE KKISGLF Sbjct: 309 MYVGGMSSSLPEDVQVAMYRSVPGLEKAEIVRNAYAIEYDCIDSRQLYPTLEFKKISGLF 368 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 GQ NG++GYEEAAAQGL AGIN+A K+ + + F R++SYIGV+IDDL +K EPY Sbjct: 369 SGGQFNGSSGYEEAAAQGLAAGINAAMKTLGREQVIFDRSESYIGVLIDDLVTKENREPY 428 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSR+EYR+ LR DNAD RLTP+G + G I + YN L K + Sbjct: 429 RMMTSRSEYRLLLRQDNADLRLTPLGHEFGLIPD----------TVYNILLDKKKQIEEE 478 Query: 485 SKNLSSTSIS--------FKQDGKT-----RTAYEFLSYPDFSIQNLFSICPDARKFSSL 531 + + I +Q G T T E + P+ L ++ PD + Sbjct: 479 TDRVEKLKIGAVDNVQEFLQQHGSTPLKTGTTLGELIRRPELDYDMLAALDPDRPQLLRG 538 Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 V E++ I Y Y RQM + + K E R IP+D +Y + L E ++KL + +P + Sbjct: 539 VAEQVNINIKYDGYITRQMKQVEHFKKLENRKIPEDINYRDIHGLCIEAQQKLEMYRPVS 598 Query: 592 LLQASKIEGMTPAALNLLLIYIKKNTVKL 620 L QAS+I G++PA +++LL+Y+K KL Sbjct: 599 LGQASRISGVSPADISVLLVYLKSGYAKL 627 >gi|196011978|ref|XP_002115852.1| hypothetical protein TRIADDRAFT_30217 [Trichoplax adhaerens] gi|190581628|gb|EDV21704.1| hypothetical protein TRIADDRAFT_30217 [Trichoplax adhaerens] Length = 651 Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust. Identities = 290/635 (45%), Positives = 399/635 (62%), Gaps = 32/635 (5%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAG E+AA AA+ G+ LI+H + IG MSCNP+ GG+GKGHL+REIDAL Sbjct: 18 YDVIVVGGGHAGTESAAAAARNGSRVCLISHDLTKIGEMSCNPSFGGIGKGHLIREIDAL 77 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGL GR+ D +GI ++VLN +KGPAV G R Q DR LYR MQ EI S NL ++QG V Sbjct: 78 DGLCGRICDLSGIHYKVLNKRKGPAVWGLRAQMDRNLYRSNMQVEIKSTPNLSLLQGAVV 137 Query: 126 GF----NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGK-LKIPAGRMGDSPSN 180 + +K + + V+ + S+I+ +VVLTTGTFLRG I+IGK L I R +N Sbjct: 138 DLILSSDGDKQLGRNYVLHNGSIIKARSVVLTTGTFLRGKIYIGKTLSIFLNR---DVTN 194 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT---NRQ 237 + + + D R+ GTP RLDG+TI + K Q DE+ PFSF+ + Q Sbjct: 195 FIDHEYEIMDPLGNRVIHGTPPRLDGRTIDYKKLVIQHGDEKPTPFSFLNRAVKIEPAEQ 254 Query: 238 IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPR-------YCPSIEDKIVRFGERNG 290 + C +T TN TH II ++ + ++ GPR YCPSIE K++RF RN Sbjct: 255 LPCFLTLTNSNTHSIITRHLHLTPHIKEEV--CGPRQYLLFMQYCPSIESKVIRFRGRN- 311 Query: 291 HQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKE 350 HQIFLEPEG ++ +VYPNGIS LPE IQ IR++ GLE V I++ GY +EYDYI+P++ Sbjct: 312 HQIFLEPEGFDSSIVYPNGISCTLPENIQKAMIRSVHGLEDVEIVQTGYGVEYDYIDPRQ 371 Query: 351 LFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGV 410 L P+LET+K+SGLF AGQINGTTGYEEAAAQG++AGINS+ + + R D YIGV Sbjct: 372 LKPSLETRKVSGLFFAGQINGTTGYEEAAAQGIIAGINSSLMVKGMSPLILDRADGYIGV 431 Query: 411 MIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQE 470 +IDDLT++G EPYRMFTSRAE+R+ LRPDNAD RLT G K+G + E+R ++ K + Sbjct: 432 LIDDLTTRGTTEPYRMFTSRAEFRLRLRPDNADLRLTEKGYKVGIVREQRFEKMVKIKTK 491 Query: 471 YNFLRSLLKSLVLTSKNLSS-TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFS 529 ++ + L+ L + + + ++S + T+ + F S + I + S+ +R F Sbjct: 492 FDKAINTLRELKFSESSWKARCNLSGMRHSVTKVNF-FFSGLEMLINSRVSLSDISRGFP 550 Query: 530 S---------LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNEL 580 + + R++IE SYA RQ + E++ E +P D DY+ L L E Sbjct: 551 AEFRDIVEDDYLCNRIEIEGSYANAIERQNKDVSELRRLEYLALPDDLDYTRLGFLDEEE 610 Query: 581 KEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 KEKLS + P L AS+I+G++ ++L LL ++KK Sbjct: 611 KEKLSTVAPRTLGSASRIDGISASSLVQLLKFVKK 645 >gi|219670949|ref|YP_002461384.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Desulfitobacterium hafniense DCB-2] gi|254811508|sp|B8G0L2|MNMG_DESHD RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|219541209|gb|ACL22948.1| glucose inhibited division protein A [Desulfitobacterium hafniense DCB-2] Length = 637 Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust. Identities = 273/626 (43%), Positives = 380/626 (60%), Gaps = 20/626 (3%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAGCEAA AA++G T LIT I M CNP++GG KGHLVREIDA Sbjct: 7 NYDVIVVGAGHAGCEAALAAARMGGRTLLITLSLDNIAHMDCNPSLGGPAKGHLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG AD +Q R+LN KGPAV R Q+D++ Y L M+ IL QENL + Q V Sbjct: 67 LGGQMGITADETSLQVRMLNTGKGPAVHALRIQSDKQAYHLHMRNAILGQENLVLHQALV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 TE +S +V + + V+LT+GT+LRG I IG G G + +L Sbjct: 127 ERIKTEDGKVSGVVTRTGAFYAAPNVILTSGTYLRGRIIIGDTMYEGGPNGQQTAMNLSG 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM------TDKITNRQI 238 + + + GR KTGTP R+ +++ + K Q D +SFM + ++QI Sbjct: 187 ALKELGLELGRFKTGTPPRIHRRSVDYTKFTVQPGDSVPWRYSFMPTQSMFWGRDVDKQI 246 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C + T ETH+II +NI + +YSG I+ GPRYCPSIEDK+VRF +R HQIFLEPE Sbjct: 247 PCWLGYTTPETHQIIQDNIHRAPLYSGKIEGIGPRYCPSIEDKVVRFADRPTHQIFLEPE 306 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 G N+D +Y G+ST++PEEIQ+ I +IPGLEK ++RPGYAIEYDY+ P +L +LE + Sbjct: 307 GWNSDELYMAGLSTSMPEEIQYDIIHSIPGLEKAELLRPGYAIEYDYVKPYQLSLSLEVR 366 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 KI GLF AGQ+NGT+GYEEAAAQGL+AGIN+A + + R++ Y+GV+IDDL +K Sbjct: 367 KIPGLFTAGQLNGTSGYEEAAAQGLLAGINAALRVQGKEPFIVRRSEGYLGVLIDDLVNK 426 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAK---YIQEYNFL- 474 GV EPYR+ TSRAEYR+ LR DNAD RLTP G ++G + + R F K I E N L Sbjct: 427 GVKEPYRLLTSRAEYRLILRQDNADLRLTPRGREIGLVKDERWAAFQKKKAAIAEINALW 486 Query: 475 -----RSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFS 529 L + L + S + G+ E + P+ +I + + P ++ Sbjct: 487 RGTTFSPLNEHLAEVLAGVHSAPVHGGISGE-----ELMRRPEITINEIKQLIPQLAEYD 541 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 + IE YA Y +Q+ E + E+R+IP++ Y + LS E +++L + P Sbjct: 542 EEALLEAGIEIKYAGYIEKQLAEIERFAKMEERMIPEEIVYDQIKGLSTEGRQRLKEVAP 601 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKK 615 N+ QA++I G+TPA +++LL+Y+++ Sbjct: 602 ANMGQATRITGVTPADISVLLVYLEQ 627 >gi|291165908|gb|EFE27955.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Filifactor alocis ATCC 35896] Length = 629 Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust. Identities = 269/617 (43%), Positives = 381/617 (61%), Gaps = 3/617 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+G GHAGCEAA +A+LG T ++T IG M CNPAIGG GK LV+EIDA Sbjct: 7 SYDVIVVGAGHAGCEAALASARLGKKTLMVTLSLDAIGHMPCNPAIGGTGKSQLVKEIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D + IQ R LN KGPAV+ R QAD+ LY M++ + ENLD++ EV Sbjct: 67 LGGEMGQNIDKSFIQSRTLNSSKGPAVQSVRAQADKNLYHREMKKVLEGVENLDIVMDEV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + +S + + N TV+L+TG FL G + +G++ P+G +G P+ L Sbjct: 127 TSLIHDGKSVSGVRTKLNCEYFGKTVILSTGVFLNGRVFMGEVNFPSGPLGQIPAEQLTE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 S + + R KTGTPAR+ +I + K + Q D + PFSFM D + ++ C +T Sbjct: 187 SLKELNLPLRRFKTGTPARVHADSIDFSKMQLQEGDAEIEPFSFMNDYLPEGNKVVCYLT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 RT +TH II EN++ SA+Y G I S GPRYCPSIEDK+VRF ++ HQ F+EPEGL+T Sbjct: 247 RTTQKTHDIIRENLQRSAMYGGFIDSKGPRYCPSIEDKVVRFSDKESHQFFVEPEGLDTK 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 Y G S+++ E+Q + T+ GLE +++RP YAIEYD I+P L P+LE + L Sbjct: 307 EYYIQGFSSSMAYEVQLEMYHTVLGLEHCHMMRPAYAIEYDCIDPLRLKPSLEIMGVENL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ NGT+GYEEAAAQGL+AGIN++RK + L+ I R +YIGV+IDDL +KG EP Sbjct: 367 FSAGQFNGTSGYEEAAAQGLMAGINASRKIDGLEPIILDRATAYIGVLIDDLVTKGTNEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRM TSRAEYR+ LR DNAD RLT +G K+G + R +RF ++ + LK + Sbjct: 427 YRMMTSRAEYRLLLRQDNADLRLTELGYKIGLVKPERYERFLAKKEQIAEEINRLKKEKI 486 Query: 484 TSKNLSSTSISFKQDGKTRT--AYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 + ++ + TRT YE L P+ + L S+ V ++ +I + Sbjct: 487 KPEEINPLLEKMGKAPFTRTISLYEALKRPEITYPLLASLGKTHESLPVQVQKQAEITAK 546 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y +Q+ + + + EKR +P+ DYS + L E ++KL+ ++PFN+ QAS+I G+ Sbjct: 547 YEGYIKKQIEQVESFRKLEKRQLPESMDYSLIEGLRLEARQKLNEIRPFNIGQASRISGV 606 Query: 602 TPAALNLLLIYIKKNTV 618 +PA +++LLIY+K+ + Sbjct: 607 SPADISVLLIYMKQQSA 623 >gi|260808243|ref|XP_002598917.1| hypothetical protein BRAFLDRAFT_79848 [Branchiostoma floridae] gi|229284192|gb|EEN54929.1| hypothetical protein BRAFLDRAFT_79848 [Branchiostoma floridae] Length = 648 Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust. Identities = 295/625 (47%), Positives = 398/625 (63%), Gaps = 44/625 (7%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAG EAAA AA++GA+T L+THK TIG MSCNP+ GG+GKGHL++EIDAL Sbjct: 35 YDVIVVGGGHAGTEAAAAAARMGANTLLVTHKLDTIGEMSCNPSFGGVGKGHLMKEIDAL 94 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ----------- 114 DG+ R+ D +GIQ++VLN +KGPAV GPR Q DR LY+ +Q E+ S Sbjct: 95 DGVCARICDKSGIQYKVLNTRKGPAVWGPRAQIDRSLYKKHLQDELFSDTPNLTFLARPV 154 Query: 115 ENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRM 174 E+L + + K ++ + + D I TVVLTTGTFLRG I+IG PAGR+ Sbjct: 155 EDLILTPNSQPDSDVCKQLVRGVRLDDGQCIHGDTVVLTTGTFLRGQINIGLETRPAGRV 214 Query: 175 GDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT 234 GD+P+ L S F GRLKTGTP R+DG+TI + Q D+ PFSF+ D + Sbjct: 215 GDAPAIGLARSLEDAGFTVGRLKTGTPPRVDGRTIDYTHLSPQPGDDPPQPFSFLNDAVW 274 Query: 235 NR---QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGH 291 + Q+ C +T TN +II++N+ H + + ++ GPRYCPSIE K++RF +R H Sbjct: 275 IKPEDQVLCHLTHTNSTVDKIILDNL-HLDRHVLE-ETTGPRYCPSIESKVLRFPKRP-H 331 Query: 292 QIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKEL 351 QI+LEPEGL+T VVYPNGIS LP E+Q +R I GLE+ +IRPGY +EYDY++P++L Sbjct: 332 QIWLEPEGLDTPVVYPNGISCTLPAEVQVDMVRQIRGLERAEVIRPGYGVEYDYMDPRQL 391 Query: 352 FPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 +LET +I LF AGQINGTTGYEEAAAQG++AGIN+ K SRT+ YIGV+ Sbjct: 392 KASLETHRIKNLFFAGQINGTTGYEEAAAQGIIAGINAVLKVQNRPAFTVSRTEGYIGVL 451 Query: 412 IDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEY 471 IDDLT++G EPYRMFTSRAE+R+SLRPDNAD RLT G + GC+ R RF Sbjct: 452 IDDLTTQGTNEPYRMFTSRAEFRLSLRPDNADERLTEKGHQAGCVSHYRYHRF------M 505 Query: 472 NFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF--S 529 + SL SL L + A++ L YPD +I L + P+ R + Sbjct: 506 DIKHSLDSSLQLLN------------------AFDLLKYPDMTIARLGDVVPELRHLVPN 547 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 + RLQIE+ Y+ +Q E +E++ +E +P + D++ L +S E+ EKL++ +P Sbjct: 548 RQLCNRLQIEAMYSCMLKKQEQEIQEVRRDEAMTLPDNLDFTRL-RVSTEVIEKLALTRP 606 Query: 590 FNLLQASKIEGMTPAALNLLLIYIK 614 + AS+I G+TPAA+ LL Y+K Sbjct: 607 QTIGAASRIPGITPAAMVQLLRYVK 631 >gi|86605018|ref|YP_473781.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Synechococcus sp. JA-3-3Ab] gi|123507844|sp|Q2JXG8|MNMG_SYNJA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|86553560|gb|ABC98518.1| glucose-inhibited division protein A [Synechococcus sp. JA-3-3Ab] Length = 643 Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust. Identities = 276/618 (44%), Positives = 378/618 (61%), Gaps = 13/618 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAGCEAA AA+LG +T ++T I CNPA+GG K LV EIDAL Sbjct: 15 YDVIVVGGGHAGCEAALAAARLGCNTLMLTLNLDKIAWQPCNPAVGGPAKSQLVHEIDAL 74 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+V D +Q RVLN +GPAV R Q D+ Y M+ + +Q NL + +G V Sbjct: 75 GGEMGKVTDRTYLQKRVLNRSRGPAVWALRAQTDKREYARVMRSVVENQPNLSIREGTVT 134 Query: 126 GFNTEKNI-ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 +N + +V S+ C V+LTTGTFL G I IG+ PAGR G+ L + Sbjct: 135 DLVLGRNDEVVGVVTHFGSVFGCGAVILTTGTFLGGRIWIGRHWQPAGRAGEFAVEGLTD 194 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGIT 243 + + F+TGRLKTGTPAR+D +++ + E+Q D L FSF + R Q++C +T Sbjct: 195 TLRQLGFETGRLKTGTPARVDRRSVDFSVMERQPGDPDLRWFSFDPEVWVPREQMDCYLT 254 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 RT ETHRII EN+ + +Y G +++ GPRYCPSIEDKIVRF ++ HQIF+EPEG + Sbjct: 255 RTTPETHRIIRENLHETPVYGGWVEAKGPRYCPSIEDKIVRFADKESHQIFIEPEGRDLP 314 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G ST +PE+IQ Q +R++PGLE+ ++RP YA+EYDY+ +L+PTL TKK+ GL Sbjct: 315 ELYIQGFSTGMPEKIQIQMLRSLPGLERCVMLRPAYAVEYDYLPATQLYPTLMTKKVQGL 374 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+AR + R SYIG +IDDL +K + EP Sbjct: 375 FCAGQINGTTGYEEAAAQGLIAGINAARLVQGKPLVTLPRESSYIGTLIDDLCTKELREP 434 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR-------QKRFAKYIQEYNFLRS 476 YRM TSR+EYR+ LR DNAD RLTP+G + G I +RR Q R A I+ R Sbjct: 435 YRMLTSRSEYRLILRADNADQRLTPLGREWGLIDDRRWALFQAKQARIAAEIERLETQR- 493 Query: 477 LLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 +K+ +LS ++ + + T E L +L + + E Sbjct: 494 -VKAHDPAGIHLS--QLTGQGIKGSATLAELLRRNPIHYADLLELGLGNEELDPFEQEAA 550 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I Y+ Y RQ + +++ + R +P D DY S+P LS E +EKL+ ++P + QA+ Sbjct: 551 EIAVKYSGYIQRQQAQIEQVSKQYHRPLPPDLDYHSIPTLSKESREKLAAVRPLTVGQAA 610 Query: 597 KIEGMTPAALNLLLIYIK 614 +I G+ PA +N LLIY++ Sbjct: 611 RIGGVNPADINALLIYLE 628 >gi|46580238|ref|YP_011046.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Desulfovibrio vulgaris str. Hildenborough] gi|81170537|sp|Q72B11|MNMG_DESVH RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|46449655|gb|AAS96305.1| glucose inhibited division protein A [Desulfovibrio vulgaris str. Hildenborough] gi|311233776|gb|ADP86630.1| glucose inhibited division protein A [Desulfovibrio vulgaris RCH1] Length = 629 Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust. Identities = 274/621 (44%), Positives = 369/621 (59%), Gaps = 19/621 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD IV+G GHAGCEAA A++G +T L+T IG +SCNPAIGGL KGH+V+EIDAL Sbjct: 13 YDCIVVGAGHAGCEAAMALARMGHATLLLTGNADRIGHLSCNPAIGGLAKGHMVKEIDAL 72 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+MG AD AGIQFR LN KGPAVR R Q DR+ Y ++R+I +Q NL V Q Sbjct: 73 GGMMGLWADEAGIQFRTLNSSKGPAVRATRAQIDRDAYLRVVRRDIFAQPNLRVWQDMAE 132 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E+ + + R V+LTTGTFL+G IH+G P GR+GD+P+ L S Sbjct: 133 SIIVEEGRAAGVRTAYGQEFRAHHVLLTTGTFLQGRIHVGLSNFPGGRLGDAPATGLSAS 192 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + GRLKTGT RL +I + E Q D+ PFSF + Q+ C +T T Sbjct: 193 LRAIGLELGRLKTGTTPRLLRDSIDFSMMEVQPPDDPPRPFSFRGPGVRLPQLPCHVTWT 252 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N TH I S +++G IK G RYCPSIEDK+ RF E+ HQ+F+EPEGL + Sbjct: 253 NERTHEAIRAGFDRSPMFTGVIKGTGARYCPSIEDKVARFPEKERHQVFVEPEGLESPEC 312 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YPNGI T+LP E+Q I TIPGLE I+RPGYAIEYDY +P +L TLETK + GL+L Sbjct: 313 YPNGIPTSLPLEVQKAMIATIPGLENAQIVRPGYAIEYDYADPVQLRSTLETKALRGLWL 372 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGT+GYEEAAAQGL A +N + + R +Y+ V++DDL +KG EPYR Sbjct: 373 AGQINGTSGYEEAAAQGLWAALNVSCTLRSMPPFLPGRDTAYMAVLVDDLVTKGTREPYR 432 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAE+R+ LR +NAD RLT G LG + + + Q ++ R+ L SL+ Sbjct: 433 MFTSRAEHRLLLRENNADARLTETGRALGLVDD-------THWQLFSTKRAALHSLLDEL 485 Query: 486 KNLSSTSISFKQDGKTR----------TAYEFLSYPDFSIQNLFSICPDARKFSSLVIER 535 +N T + +D +R + + L P ++ +L +F+ V E Sbjct: 486 ENRRITPDAAARDIFSRLGEPAPTKGVSLADILRRPSLTLPDLAPFWEGVTRFADDVREE 545 Query: 536 LQIESSYAAYTGRQM-IEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 + Y+ Y RQ + A+ + E+ ++P+D DY+ +P L+ E+ EKL ++P L Q Sbjct: 546 AETIVKYSGYLARQQELVARSARMEDT-VLPEDMDYTVIPGLTREIVEKLGKVRPHTLGQ 604 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 A++I G+TPAAL L I ++K Sbjct: 605 AARISGVTPAALTCLEIQLRK 625 >gi|304405895|ref|ZP_07387553.1| glucose inhibited division protein A [Paenibacillus curdlanolyticus YK9] gi|304345138|gb|EFM10974.1| glucose inhibited division protein A [Paenibacillus curdlanolyticus YK9] Length = 632 Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust. Identities = 270/619 (43%), Positives = 383/619 (61%), Gaps = 9/619 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + SYDVIV+G GHAG EAA AA++G T L+T + M CNP+IGG KGH+VRE Sbjct: 4 VGGSYDVIVVGAGHAGSEAALAAARMGCETLLLTINLDMVAFMPCNPSIGGPAKGHVVRE 63 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G MGR D IQ R+LN KGPAV R QAD+ Y+ M++ I ++L + Q Sbjct: 64 IDALGGEMGRNIDKTFIQMRMLNTGKGPAVHALRAQADKFDYQHMMKKTIEETDHLTLRQ 123 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G V E ++ + + R VV+TTGT++RG + +G+L +G PS Sbjct: 124 GMVDELIVEDGHCVGVITKTGAEYRAKAVVITTGTYMRGKVIMGELMYESGPNNQQPSIK 183 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L F R KTGTP R+ G TI + KTE Q DE+ FS+ T+ N Q+ C Sbjct: 184 LSQCLKDLGFQLARFKTGTPPRVHGDTIDFSKTEIQPGDEKPKFFSYETESSNNEQLPCW 243 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T T+ TH+II +N+ + ++SG I+ GPRYCPSIEDKIVRF ++ HQIFLEPEG N Sbjct: 244 LTYTSETTHQIINDNLHRAPMFSGAIEGTGPRYCPSIEDKIVRFADKPKHQIFLEPEGKN 303 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T Y G+ST++PE++Q +R+IPGLE V ++R GYAIEYD + P +L+P+LETK I Sbjct: 304 TSEYYVQGLSTSMPEDVQLGILRSIPGLENVEMMRTGYAIEYDAVVPTQLWPSLETKLIE 363 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQINGT+GYEEA QG+VAGIN+ARK+ + + R+ YIGVMIDDL +KG Sbjct: 364 GLFTAGQINGTSGYEEAGGQGIVAGINAARKAQGKEPVIIERSQGYIGVMIDDLVTKGTS 423 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAEYR+ LR DNAD RLTP+G ++G I Q+R+ +Y+ + + ++ L Sbjct: 424 EPYRLLTSRAEYRLLLRHDNADLRLTPLGYEIGLI---TQERYDRYLNKKELVEQEIERL 480 Query: 482 VLTSKNL-SSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIER 535 T + S + G +A L P+ + ++ + P + + + E+ Sbjct: 481 KTTKIRMEESVQALLAEIGSAPLTGGCSALSLLLRPEVTYAHIEKLVPAPYELTEEMKEQ 540 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 +I+ Y+ Y +Q+ + + + EK+ IP D DY + L+NE K LS ++P ++ QA Sbjct: 541 AEIQVKYSGYIEKQLHQVERMGKMEKKRIPDDIDYFDVHGLANEAKTNLSQIRPLSIGQA 600 Query: 596 SKIEGMTPAALNLLLIYIK 614 S+I G+TPA +++LL+Y++ Sbjct: 601 SRIAGVTPADISILLVYLE 619 >gi|283850202|ref|ZP_06367491.1| glucose inhibited division protein A [Desulfovibrio sp. FW1012B] gi|283574228|gb|EFC22199.1| glucose inhibited division protein A [Desulfovibrio sp. FW1012B] Length = 618 Score = 513 bits (1321), Expect = e-143, Method: Compositional matrix adjust. Identities = 283/619 (45%), Positives = 374/619 (60%), Gaps = 13/619 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D+I++G GHAGCEAA AA+LG T L+T IG +SCNPAIGGL KGH+VREIDAL Sbjct: 3 FDLIIVGAGHAGCEAAMAAARLGLGTLLLTQNVDRIGHLSCNPAIGGLAKGHMVREIDAL 62 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+MG ADAAGIQFR LN +KGPAVR R Q DR+ Y ++R+I +QE L V Q V Sbjct: 63 GGMMGLWADAAGIQFRTLNTRKGPAVRATRAQIDRDAYLRVVRRDIFAQEGLLVRQDTVE 122 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E S + V+LTTGTFL G+IHIG ++ GR+GD PS+ L S Sbjct: 123 AIVAEDGRASGVRTGSGETFAARAVLLTTGTFLGGLIHIGLTQLRGGRLGDPPSDGLSAS 182 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + GRLKTGT RL K+I + T Q D FSF RQ+ C +T T Sbjct: 183 LREHGLILGRLKTGTTPRLLAKSIDFAATTPQPGDHPPPAFSFHGPGPVLRQVPCHLTYT 242 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N TH I S +++G I+ G RYCPS+EDK+ RF ER+ H +FLEPEGL++ + Sbjct: 243 NERTHEAIRAGFDRSPLFTGVIEGTGARYCPSVEDKVARFPERDRHHVFLEPEGLDSPEI 302 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YPNGIST+LP E+Q I TIPGLE+ +I+RPGYAIEYDY +P +L PTLETK + GLFL Sbjct: 303 YPNGISTSLPIEVQKALIATIPGLEQAHIVRPGYAIEYDYADPVQLLPTLETKALPGLFL 362 Query: 366 AGQINGTTGYEEAAAQGLVAGIN--SARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 AGQINGT+GYEEAAAQGL A +N ARK R +Y+ V++DDL +KG EP Sbjct: 363 AGQINGTSGYEEAAAQGLWAALNIFCARKGRP--PFLPRRDQAYMAVLVDDLVTKGTTEP 420 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R+ LR NAD RLTP+G +LG +G+R ++ Y ++ L ++++ L Sbjct: 421 YRMFTSRAEHRLLLREGNADARLTPLGRELGLVGDR---QWELYRRKEESLAAVIEGLCG 477 Query: 484 ------TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 + + T++ + + ++ E L P+ ++ +L P+ V + Sbjct: 478 RRVRPDDCDDAAWTALGGRPEDRSLRLDELLRRPEVTLPDLGRFWPELAALPPEVAVEAE 537 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 Y Y RQ A + E ++P D DY + LS E+ EKL + P L QA + Sbjct: 538 TRVKYEGYLRRQGELAGRMGRLEAMVLPPDLDYGLVSGLSREVVEKLGRVAPLTLGQAGR 597 Query: 598 IEGMTPAALNLLLIYIKKN 616 I G+TPAAL L I++KK Sbjct: 598 ISGVTPAALACLEIHLKKR 616 >gi|189345565|ref|YP_001942094.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Chlorobium limicola DSM 245] gi|189339712|gb|ACD89115.1| glucose inhibited division protein A [Chlorobium limicola DSM 245] Length = 621 Score = 513 bits (1321), Expect = e-143, Method: Compositional matrix adjust. Identities = 277/623 (44%), Positives = 382/623 (61%), Gaps = 16/623 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IV GGGHAGCEA +A++G S LI+ + + MSCNPAIGG+ KG + REIDAL Sbjct: 2 YDIIVAGGGHAGCEAVLASARMGLSCLLISSDLTALARMSCNPAIGGVAKGQITREIDAL 61 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ DA GIQFR+LN KGPA+ PR QADR LY M+R I + N+D++Q V Sbjct: 62 GGEMGKAIDAEGIQFRMLNRSKGPAMHSPRAQADRLLYSQYMRRVIEKEINIDLLQDTVT 121 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGR-MGDSPSNSLFN 184 G +S + + + I V+L GTFL G+IHIG GR + + P L Sbjct: 122 GIKNRSGTVSGVYISTGTFIESRAVILACGTFLNGLIHIGLSHYQGGRTLAEPPVTGLTE 181 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGIT 243 + F F GRLKTGTP R+D +++ + K E+Q D +PFSF T + NR Q+ C +T Sbjct: 182 NLSSFGFRAGRLKTGTPPRIDKRSVDYSKLEEQMGDSLPVPFSFSTHTLANRSQLSCYLT 241 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 +T ETH I+ S ++SG +K GPRYCPSIEDKI RF + H IFLEPEG +T+ Sbjct: 242 KTTAETHEILRSGFDRSPLFSGKVKGTGPRYCPSIEDKINRFSNKESHHIFLEPEGFDTN 301 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y NG ST+LPE+IQ +++IPGLEKV +IRPGYAIEYDY P ++ TLETK+I L Sbjct: 302 EMYVNGFSTSLPEDIQLLGLKSIPGLEKVKMIRPGYAIEYDYFFPYQIRSTLETKRIDNL 361 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQING++GYEEAAAQGL+AGIN++ K + R+D+YIGV+IDDL +K EP Sbjct: 362 YFAGQINGSSGYEEAAAQGLMAGINASLKLLDKPPLILKRSDAYIGVLIDDLITKETDEP 421 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQK----RFAKYIQEYNFLRSLLK 479 YRMFTS AE+R+ LR DNAD RL+ G G + E+ +F+ I++ L S K Sbjct: 422 YRMFTSSAEHRLLLRHDNADLRLSSYGYNAGLLDEKSMSDCHIKFSA-IEKVKLLASNFK 480 Query: 480 -SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS------LV 532 V +++LS I+ Q + +A L P + + L R+ S LV Sbjct: 481 FQPVSINQHLSINGIAEIQ--TSLSALNLLKRPGITFRMLLDGNEYFRESVSEITTDPLV 538 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 E+++I+ Y Y R ++ ++ I E IP F Y L LSNE +EKL +P + Sbjct: 539 FEQIEIDIKYEGYLKRDLLMSERIIRLESLQIPHSFQYEMLSGLSNEGREKLIRYRPETI 598 Query: 593 LQASKIEGMTPAALNLLLIYIKK 615 QA++I G++P+ +++L+I + + Sbjct: 599 GQATRILGVSPSDISVLMIKLGR 621 >gi|254303504|ref|ZP_04970862.1| glucose-inhibited cell division protein A [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323696|gb|EDK88946.1| glucose-inhibited cell division protein A [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 633 Score = 513 bits (1321), Expect = e-143, Method: Compositional matrix adjust. Identities = 278/630 (44%), Positives = 382/630 (60%), Gaps = 21/630 (3%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +D+IV+G GHAGCEAA +A++G TA+ T IG MSCNP++GG K HL REID Sbjct: 2 QEFDIIVVGAGHAGCEAALASARMGMKTAVFTISLDNIGVMSCNPSLGGPAKSHLAREID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G MGR D IQ RVLN KKGPAVR R QAD+ Y M++ + +NL VIQG Sbjct: 62 ALGGEMGRNIDKTFIQIRVLNTKKGPAVRSLRAQADKMTYANEMKKTLEHTDNLSVIQGM 121 Query: 124 VAGFNTE----KNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 V+ E K +I I +++ R V+L TGTFLRG+IHIG++ AGRMG+ S Sbjct: 122 VSELIVEEENGKKVIKGIKIREGLEYRAKIVILATGTFLRGLIHIGEVNFSAGRMGELSS 181 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADE-RLIPFS-FMTDK--ITN 235 L S K GR KTGTPAR+DG+TI + E+Q D+ +++ FS TDK ++ Sbjct: 182 EDLPLSLEKVGLKLGRFKTGTPARIDGRTIDFSVLEEQPGDKSQVLKFSNRTTDKEALSR 241 Query: 236 RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFL 295 RQI C I TN + H II + + S +++G I+ GPRYCPSIEDK+ R+ ++N H +FL Sbjct: 242 RQISCYIAHTNEKVHEIIKNSKERSPMFNGKIQGLGPRYCPSIEDKVFRYPDKNQHHLFL 301 Query: 296 EPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTL 355 E EG T+ +Y G+S++LP ++Q + I+ + G E I+R YAIEYDY+ P+E+ TL Sbjct: 302 EREGYETNEIYLGGMSSSLPVDVQEEMIKNLQGFENAKIMRYAYAIEYDYVPPEEIKYTL 361 Query: 356 ETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDL 415 E++ I LFLAGQINGT+GYEEA AQGL+AGIN+ RK + I R DSYIG +IDDL Sbjct: 362 ESRTIDNLFLAGQINGTSGYEEAGAQGLMAGINAVRKLRNEEPIILDRADSYIGTLIDDL 421 Query: 416 TSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLR 475 SKG EPYRMFT+R+EYR+ LR DNAD RL+ IG +LG I E +R K ++ + Sbjct: 422 VSKGTNEPYRMFTARSEYRLYLREDNADLRLSKIGYELGLIPEEEYQRVEKKRRDVELIT 481 Query: 476 SLLKSLVLTSKNLSSTSISFK------QDGKTRTAYEFLSYPDFSIQNLFSICP-----D 524 +L + N K +DG T E L P+ + +++ I D Sbjct: 482 EILTKTSVGPSNPRVNETLLKRGENPIKDGS--TLLELLRRPEVTFKDIEYISEEIKGVD 539 Query: 525 ARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKL 584 + + +++I Y Y R + ++ K E + IP D DY L + E K+KL Sbjct: 540 LQGYDHDTTYQVEITVKYQGYINRALKMIEKHKSMENKKIPADIDYDDLKTIPKEAKDKL 599 Query: 585 SILKPFNLLQASKIEGMTPAALNLLLIYIK 614 +KP N+ QAS+I G++PA + +LIY+K Sbjct: 600 KRIKPINIGQASRISGVSPADIQAILIYLK 629 >gi|164686453|ref|ZP_02210481.1| hypothetical protein CLOBAR_00018 [Clostridium bartlettii DSM 16795] gi|164604464|gb|EDQ97929.1| hypothetical protein CLOBAR_00018 [Clostridium bartlettii DSM 16795] Length = 631 Score = 513 bits (1321), Expect = e-143, Method: Compositional matrix adjust. Identities = 270/619 (43%), Positives = 385/619 (62%), Gaps = 13/619 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAGCEAA +A++G T ++T +IG M CNP+IGG GKG LV+EIDA Sbjct: 8 NYDVIVVGAGHAGCEAALASARMGCKTLMVTLTLDSIGMMPCNPSIGGTGKGQLVKEIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG D IQ R+LN KGPAV R QAD+ Y M++ + ++ NL+++ EV Sbjct: 68 LGGEMGVNTDKTFIQSRMLNTAKGPAVHSLRAQADKFKYHTEMKKTLENEPNLEIVMDEV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + +I ++ + VVL TG +L +I+IG++ + G G + L + Sbjct: 128 VDLINDGKVIKGVITRMGCKYHSKAVVLATGVYLNSLIYIGEVTLNEGPNGLGYAEKLTD 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + D R KTGTPAR+ +I + + Q DE++ PFSFM+D + Q+ C + R Sbjct: 188 KLVDLGLDMRRFKTGTPARIHRDSIDFSQMVIQEGDEKITPFSFMSDDLKIDQVPCYLAR 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TNL+TH++IM+NI SA+Y G I S GPRYCPSIEDK+VRF ++ HQ F+EPEGL+T Sbjct: 248 TNLDTHKVIMDNINRSAMYGGKIHSTGPRYCPSIEDKVVRFNDKESHQTFIEPEGLDTKE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y GIST+LP E+Q Q R++ GLE I+RP YAIEYD +NP +L +LE K LF Sbjct: 308 MYIQGISTSLPYEVQIQMYRSMKGLENCKIMRPAYAIEYDCLNPTQLKASLEIKVTENLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ NGT+GYEEAAAQGL+AGIN+ARK + R+++YIGV+IDDL +KG EPY Sbjct: 368 SAGQFNGTSGYEEAAAQGLMAGINAARKIQGKEPFILDRSEAYIGVLIDDLITKGTNEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF--AKYIQEYNFLRSLLKSLV 482 RM TSRAEYR+ LR DNAD RLT G ++G + R RF K + E R LK+ Sbjct: 428 RMMTSRAEYRLYLRQDNADMRLTEKGYEIGLASQERYDRFLTKKALVEAELER--LKTER 485 Query: 483 LTSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDA-RKFSSLVIERL 536 +T K ++ + + G + + Y+FL P+ + + L I A + V E+ Sbjct: 486 VTPKEVNELLV---EKGASEIKVGLSLYDFLKRPEVTYELLEQIGKAASEEVPYDVKEQC 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 I S Y Y +Q+ + + K E + + +D DYS++ L E ++KL+ +KP ++ QAS Sbjct: 543 VIMSKYEGYIDKQLKQIDQFKKLENKKLSEDIDYSTIEGLRIEARQKLNDIKPISIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKK 615 +I G++PA +++LLIY+++ Sbjct: 603 RISGVSPADISVLLIYLEQ 621 >gi|311244465|ref|XP_003121457.1| PREDICTED: protein MTO1 homolog, mitochondrial-like [Sus scrofa] Length = 691 Score = 513 bits (1321), Expect = e-143, Method: Compositional matrix adjust. Identities = 296/630 (46%), Positives = 409/630 (64%), Gaps = 25/630 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DV+VIGGGHAG EAAA AA+ G+ T L+TH+ TIG MSCNP+ GG+GKGHL+RE+DAL Sbjct: 37 FDVVVIGGGHAGTEAAAAAARCGSRTLLLTHRVDTIGQMSCNPSFGGIGKGHLMREVDAL 96 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGL R+ D +G+ ++VLN +KGPAV G R Q DR LY+ MQ+EIL+ L V +G V Sbjct: 97 DGLCSRICDQSGVHYKVLNRRKGPAVWGLRAQIDRNLYKQNMQKEILNTPLLTVQEGAVE 156 Query: 126 GF--------NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 T K + +V+ D + + +VVLTTGTFLRGVI IG PAGR+GD Sbjct: 157 DLILTEPEPERTGKYRVCGVVLVDGNTVYADSVVLTTGTFLRGVIVIGLETHPAGRLGDQ 216 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR- 236 PS L + K F GRLKTGTP R+ ++I + KQ D IPFSFM + + + Sbjct: 217 PSVGLAQTLEKLGFVVGRLKTGTPPRIAKESINFSILNKQTPDNPSIPFSFMNETVWIKP 276 Query: 237 --QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 Q+ C +T TN I++EN+ H + + + GPRYCPSIE K++RF R HQ++ Sbjct: 277 EDQLPCHLTHTNPRVDEIVLENL-HLNCHVKET-TRGPRYCPSIESKVLRFPNRL-HQVW 333 Query: 295 LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT 354 LEPEG+++D++YP G+S LP E+Q + I I GLEK +I+PGY ++YDY++P+++ P+ Sbjct: 334 LEPEGMDSDLIYPQGLSVTLPAELQEKMITCIRGLEKAKMIQPGYGVQYDYLDPRQITPS 393 Query: 355 LETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDD 414 LET + LF AGQINGTTGYEEAAAQG++AGIN++ + SRT+ YIGV+IDD Sbjct: 394 LETHLVQRLFFAGQINGTTGYEEAAAQGIMAGINASLRVRCKPPFVISRTEGYIGVLIDD 453 Query: 415 LTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMK-LGCIGERRQKRFAKYIQEYNF 473 LT+ G EPYRMFTSRAE+R+SLRPDNADNRLT G K GC+ ++R +R + Sbjct: 454 LTTLGTNEPYRMFTSRAEFRLSLRPDNADNRLTFRGYKEAGCVSQQRYERASWMKSSLEE 513 Query: 474 LRSLLKSLVLTS---KNL-SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA-RKF 528 S+LKS+ +S KNL SIS + R A + L Y + +++L P+ +K+ Sbjct: 514 GISVLKSIEFSSSKWKNLIPEASISIGKSVPLR-ALDVLKYEEVDMKSLAKAVPEPLKKY 572 Query: 529 SSL--VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLP--ALSNELKEKL 584 S + ERL+IE++Y A Q E KE++ +E +P+D DY +L +LS E++EKL Sbjct: 573 SKCRELAERLKIEATYEAVLFHQQQEMKEVQRDEALRLPEDLDYLTLRDVSLSYEVREKL 632 Query: 585 SILKPFNLLQASKIEGMTPAALNLLLIYIK 614 +P + AS+I G+TPAA+ LL ++K Sbjct: 633 HFSRPQTIGAASRIPGVTPAAIINLLRFVK 662 >gi|308175808|ref|YP_003922513.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Bacillus amyloliquefaciens DSM 7] gi|307608672|emb|CBI45043.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Bacillus amyloliquefaciens DSM 7] gi|328555784|gb|AEB26276.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus amyloliquefaciens TA208] gi|328914173|gb|AEB65769.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Bacillus amyloliquefaciens LL3] Length = 628 Score = 513 bits (1321), Expect = e-143, Method: Compositional matrix adjust. Identities = 270/618 (43%), Positives = 379/618 (61%), Gaps = 7/618 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAG EAA +A+ GA T ++T + M CNP++GG KG +VREIDAL Sbjct: 8 YDVIVIGAGHAGVEAALASARQGAKTLVLTINLDMVAFMPCNPSVGGPAKGIVVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M R D IQ R+LN KGPAVR R QAD+ Y+ M+ + NL ++QG Sbjct: 68 GGEMARNIDKTHIQMRMLNTGKGPAVRALRAQADKFQYQHEMKHTLEKTPNLTLLQGIAE 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E ++ Q + + TVVLTTGT+LRG I +G L +G PS L Sbjct: 128 RLIIEDGECRGVITQTGAEYKAKTVVLTTGTYLRGRIILGDLSYSSGPNNQQPSIKLSEH 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + FD R KTGTP R+ +I + KTE Q D FS+ T + Q+ C +T T Sbjct: 188 LEELGFDLVRFKTGTPPRVSSDSIDYSKTEIQPGDPVPRAFSYETVEYITDQLPCWLTYT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 + ETH II N+ S +YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT V Sbjct: 248 SPETHEIIDSNLHRSPMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQEV 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+ST+LPE++Q + + TIPGLEKV ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 308 YVQGLSTSLPEDVQQRMLATIPGLEKVQMMRAGYAIEYDAIVPTQLWPTLETKKIPNLYT 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGT+GYEEAA QG++AGIN+ RK+ + + SR+D+YIGV+IDDL +KG EPYR Sbjct: 368 AGQINGTSGYEEAAGQGIMAGINAGRKALGKEEVILSRSDAYIGVLIDDLVTKGTNEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL-- 483 + TSRAEYR+ LR DNAD RLT IG ++G I + R + F K + L S+++ Sbjct: 428 LLTSRAEYRLLLRHDNADLRLTEIGHEIGLISDERYEAFEKKKAAIEAEKKRLWSVIIKP 487 Query: 484 ---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + + S S +DG T + + P+ + + + + P V E+++I+ Sbjct: 488 SPENQEYIRSLGGSELKDGVRGT--DLMKRPEMNYETVTKLAPADSPVPQDVAEQVEIQV 545 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y + + + +++K E + IP DY ++ ++ E ++KL ++P ++ QAS+I G Sbjct: 546 KYEGYIEKSLQQVEKLKKMENKKIPDRIDYDAIKGIATEARQKLKEVRPLSVAQASRISG 605 Query: 601 MTPAALNLLLIYIKKNTV 618 + PA +++LL+Y+++ + Sbjct: 606 VNPADISILLVYLEQGRI 623 >gi|253681320|ref|ZP_04862118.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium botulinum D str. 1873] gi|253562558|gb|EES92009.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium botulinum D str. 1873] Length = 630 Score = 513 bits (1321), Expect = e-143, Method: Compositional matrix adjust. Identities = 262/618 (42%), Positives = 391/618 (63%), Gaps = 13/618 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DV VIG GHAGCEAA +A+LG +T + +++ M+CNP IGG KGHLVREIDAL Sbjct: 8 FDVAVIGAGHAGCEAALASARLGINTIVFATDLASVAMMACNPNIGGTAKGHLVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG D IQ R+LN KGPAV R QAD++ Y M+ + + ENL + Q E+ Sbjct: 68 GGEMGINIDHTYIQSRMLNTSKGPAVHSLRAQADKKKYSERMKHVLETTENLHLKQAEII 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + E + ++ ++ + + +L TG +L+ I IG + G G +P+N L S Sbjct: 128 KVDIENGKVKGVLTKNGAYYKVKAAILCTGVYLKSRIIIGDINYEGGPSGLAPANMLSQS 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + R KTGTPAR++ +++ + K +Q D+ ++PFSFM++ I QI C +T + Sbjct: 188 LIDSGIKLTRFKTGTPARINRRSVDFSKMIEQKGDDNIVPFSFMSENIDRDQISCYLTYS 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 ET ++++ENI S +Y+G IKS GPRYCPS EDKI+RF E++ HQIF+EPEG NT+ + Sbjct: 248 GDETKKVVLENIDRSPLYNGSIKSVGPRYCPSFEDKIMRFPEKDKHQIFIEPEGENTEEL 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+S++LPE++Q + +R++PGLE ++R YAIEYD I+P +L +LE K+I GLF Sbjct: 308 YVGGMSSSLPEDVQIKMLRSVPGLENAEMMRTAYAIEYDCIDPTQLELSLEFKEIDGLFS 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ+NG++GYEEA QGL+AGIN+A K + R+D+YIGV+IDDL +KG EPYR Sbjct: 368 AGQMNGSSGYEEAGCQGLIAGINAALKLKGEKPLILKRSDAYIGVLIDDLVTKGTQEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 M TSRAEYR+ LR DNAD RLT +G K+G + + R +F K + LK++ +T+ Sbjct: 428 MMTSRAEYRLLLRQDNADLRLTEMGRKIGLVKDERYSKFTKRKADIEKEIERLKNIQITN 487 Query: 486 K--------NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 K N++S+++ K + YE + P+ + + + + K S V E++ Sbjct: 488 KQEVNKFLENINSSALK-----KPISLYELIKRPELNYFIVEELDENRPKLSKDVQEQVN 542 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I S Y Y +Q+ + ++ K E RLIPK+FDY+ + L E +KL +KP ++ QAS+ Sbjct: 543 IISKYEGYIQKQLEQVEQFKKLENRLIPKEFDYTEVKGLRKEAIQKLDKIKPVSIGQASR 602 Query: 598 IEGMTPAALNLLLIYIKK 615 I G++PA +++LLI +++ Sbjct: 603 ISGVSPADISVLLIVLEQ 620 >gi|24658174|ref|NP_611677.1| CG4610 [Drosophila melanogaster] gi|7291427|gb|AAF46854.1| CG4610 [Drosophila melanogaster] gi|21429996|gb|AAM50676.1| GH24245p [Drosophila melanogaster] gi|220950036|gb|ACL87561.1| CG4610-PA [synthetic construct] Length = 661 Score = 513 bits (1321), Expect = e-143, Method: Compositional matrix adjust. Identities = 277/631 (43%), Positives = 414/631 (65%), Gaps = 27/631 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+VIGGGHAG EA+A AA++G+ T L+THK TIG MSCNP+ GG+GKGHL+RE+DAL Sbjct: 31 YDVVVIGGGHAGTEASAAAARMGSRTLLLTHKLETIGEMSCNPSFGGIGKGHLMREVDAL 90 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DG+ R D +G+ ++VLN ++GPAV GPR Q DR+LY+ A+Q+E+ S NL++ V Sbjct: 91 DGVCARCCDVSGVHYKVLNRRRGPAVWGPRAQIDRQLYKKAVQQELHSTPNLEIRAAAVD 150 Query: 126 GF------NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 +T+ + +++ + ++R +VVLTTGTFLR I+IG PAGR+GD+P+ Sbjct: 151 NLLIEDEQDTQARRCTGVLLANGEVVRSRSVVLTTGTFLRAHINIGLEVRPAGRIGDAPA 210 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI---TNR 236 +L + + F GRLKTGTP R+ ++ + + ++ D+ +PFSF+ + Sbjct: 211 KALGEAIDRLGFRMGRLKTGTPPRIAKDSVDFSQLQRHEGDDPPMPFSFLNKDVWLPAKD 270 Query: 237 QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLE 296 Q+ C +T T + I+ +N+ + + +I GPRYCPSIE KI+RFG + HQ++LE Sbjct: 271 QLPCYLTYTTPKVSDIVRDNLHVNRHVTEEIT--GPRYCPSIESKILRFGAKV-HQVWLE 327 Query: 297 PEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLE 356 PEGL++ +VYP GIS LP + Q + + I GLEK +++PGY +EYD+I+P+EL+PTLE Sbjct: 328 PEGLDSSLVYPQGISCTLPHDQQVELVHAIQGLEKAVVVQPGYGVEYDFIDPRELYPTLE 387 Query: 357 TKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDC--ICFSRTDSYIGVMIDD 414 TK++ GLF AGQINGTTGYEEAAAQG++AG N+A K+ D + SRT+ YIGV+IDD Sbjct: 388 TKRVPGLFFAGQINGTTGYEEAAAQGIIAGANAAGKTRHSDGRQLTISRTEGYIGVLIDD 447 Query: 415 LTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFL 474 LTS G EPYRMFTSRAE+R+SLRPDNAD RLT G + G + R + F Q L Sbjct: 448 LTSLGTNEPYRMFTSRAEFRLSLRPDNADMRLTQKGYEFGLVSSDRYQHFQ---QTEARL 504 Query: 475 RSLLKSLVLTSKNL----SSTSISFKQDGKTRTAYEFLSYP--DFSIQNLFSICPDARKF 528 +S ++SL K+ + ++ + ++A++ L P + +I+ L + P+ + Sbjct: 505 QSAIESLRRLRKHTHYWRQALNLPKAKASVEKSAFDMLGIPADNITIEQLIHLHPNELSW 564 Query: 529 ---SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDY-SSLPALSNELKEKL 584 + ERL+IE+ Y+ + Q + ++++ EE+ IP D DY S +LSNE ++KL Sbjct: 565 LKGERNLAERLKIEALYSFFVDEQQRDVEDVRREERLSIPADIDYFSKSLSLSNEERQKL 624 Query: 585 SILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 ++++P + AS+I+G+TP+ + +L Y+KK Sbjct: 625 TLIQPQTIAAASRIQGVTPSTIVRILKYVKK 655 >gi|312279314|gb|ADQ63971.1| Putative tRNA(5-carboxymethylaminomethyl-2-thiouridylate) synthase subunit [Streptococcus thermophilus ND03] Length = 633 Score = 513 bits (1320), Expect = e-143, Method: Compositional matrix adjust. Identities = 276/622 (44%), Positives = 384/622 (61%), Gaps = 16/622 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IVIG GHAG EA+ AA++G L T + M CNP+IGG KG +VREIDAL Sbjct: 9 YDIIVIGAGHAGVEASLAAARMGCKVLLATINLEMLAFMPCNPSIGGSAKGIVVREIDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ D IQ ++LN KGPAVR R QAD+ LY + M+ + QENL + Q V Sbjct: 69 GGEMGKNIDKTYIQMKMLNTGKGPAVRALRAQADKALYAMTMKHTVERQENLTLRQSMVD 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + N VV+TTGT LRG I IG LK +G S +L ++ Sbjct: 129 EILVEDSKVVGVRTATNQKYGAKAVVVTTGTALRGEIIIGDLKYSSGPNNSLASVTLADN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 + + GR KTGTP R+ +I +++TE Q DE+ FSF++ + QI C +T Sbjct: 189 LKELGLEIGRFKTGTPPRVKASSINYEETEIQPGDEKPNHFSFLSKDEDYLQDQIPCWLT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN E+H II N+ + ++SG +K GPRYCPSIEDKIVRF ++N HQ+FLEPEG T+ Sbjct: 249 YTNQESHDIINNNLHRAPMFSGIVKGVGPRYCPSIEDKIVRFADKNRHQLFLEPEGRETE 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE++Q + I +I GLEK +IR GYAIEYD + P +L TLETK ISGL Sbjct: 309 EVYVQGLSTSLPEDVQKELIHSIKGLEKAEMIRTGYAIEYDIVLPHQLRATLETKLISGL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ NGT+GYEEAA QGLVAGIN+A K + R+D+YIGVMIDDL +KG LEP Sbjct: 369 FTAGQTNGTSGYEEAAGQGLVAGINAALKVQGKPELILKRSDAYIGVMIDDLVTKGTLEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL------ 477 YR+ TSRAEYR+ LR DNAD RLTPIG ++G + + R F I++ F R L Sbjct: 429 YRLLTSRAEYRLILRHDNADMRLTPIGREVGLVDDERWNIFK--IKKNQFDRELTRLSKE 486 Query: 478 -LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYP--DFSIQNLFSICPDARKFSSLVIE 534 LK + T++ + ++ FK TA EF+ P D++ F + P A + VIE Sbjct: 487 KLKPIKETNEKIQ--ALGFKPLTDAMTAKEFMRRPEIDYATATQF-VGPAAEDLDAKVIE 543 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 L+ E Y Y + + + ++K E++ IP++ D+ ++ +++ E ++K + P + Q Sbjct: 544 LLETEIKYEGYINKALDQVAKMKRMEEKKIPENIDWDAIDSIATEARQKFKKINPETIGQ 603 Query: 595 ASKIEGMTPAALNLLLIYIKKN 616 AS+I G+ PA +++L++Y++ N Sbjct: 604 ASRISGVNPADISILMVYLEGN 625 >gi|331092105|ref|ZP_08340936.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Lachnospiraceae bacterium 2_1_46FAA] gi|330402306|gb|EGG81877.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Lachnospiraceae bacterium 2_1_46FAA] Length = 632 Score = 513 bits (1320), Expect = e-143, Method: Compositional matrix adjust. Identities = 269/625 (43%), Positives = 383/625 (61%), Gaps = 25/625 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+VIG GHAGCEA A+LG T + T +++ M CNP IGG KGHLVREIDAL Sbjct: 15 YDVVVIGAGHAGCEAGLATARLGLKTIVFTVSINSVALMPCNPNIGGTSKGHLVREIDAL 74 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+V D IQ ++LN KGPAV R QAD+ Y M+ + +QENL++ Q EV Sbjct: 75 GGEMGKVIDKTFIQSKMLNKSKGPAVHSLRAQADKAQYSKTMRCVLENQENLELKQAEVT 134 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E I+ + ++ C V+L TGT+L+ G++ G G +N L +S Sbjct: 135 DILVEDGKITGVQTYSGAVYHCKAVILCTGTYLKSRCIYGEISNETGPDGLQAANYLTDS 194 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 + + R KTGTPAR+D +I + K E+QF DER++PFSF T + + Q C +T Sbjct: 195 LKRLGIEMYRFKTGTPARIDKNSIDFSKMEEQFGDERVVPFSFTTNPEDVQIEQASCWLT 254 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH II +N+ S ++SG I+ GPRYCPSIEDK+V+F ++N HQ+F+EPEGL+T+ Sbjct: 255 YTNEKTHEIIRQNLDRSPLFSGMIEGTGPRYCPSIEDKVVKFADKNRHQVFIEPEGLDTN 314 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G+S++LPE++Q++ R++PGLE I+R YAIEYD I+ ++L+PTLE KKI GL Sbjct: 315 EMYIGGMSSSLPEDVQYEMYRSVPGLENARIMRNAYAIEYDCIDARQLYPTLEFKKIEGL 374 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + GQ NG++GYEEAAAQGL+AGIN+A K + I R++ YIGV+IDDL +K EP Sbjct: 375 YSGGQFNGSSGYEEAAAQGLIAGINAALKLLGREQIVIDRSEGYIGVLIDDLVTKESHEP 434 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRM TSRAEYR+ LR DNAD RLT IG K+G I R Y+ L+ + + Sbjct: 435 YRMMTSRAEYRLLLRQDNADQRLTEIGYKVGLISNDR----------YSHLKEKERQIEQ 484 Query: 484 TSKNLSSTSIS--------FKQDGKT-----RTAYEFLSYPDFSIQNLFSICPDARKFSS 530 + + T+I ++ G T T E + P+ + + L I K S Sbjct: 485 EVERVKHTNIGANGKVQEVLEKYGSTPLNSGTTLAELIRRPELNYEALAPIDVKREKLSD 544 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 VIE++ I Y Y RQM + ++ K E + IP + DY + +L E +KL +P Sbjct: 545 EVIEQVNISIKYEGYITRQMKQVEQFKKLETKRIPDEIDYDDVKSLRIEAVQKLKQYRPI 604 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 ++ QAS+I G++PA +++LL+Y+++ Sbjct: 605 SIGQASRISGVSPADISVLLVYMEQ 629 >gi|258512902|ref|YP_003186336.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257479628|gb|ACV59947.1| glucose inhibited division protein A [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 628 Score = 513 bits (1320), Expect = e-143, Method: Compositional matrix adjust. Identities = 276/615 (44%), Positives = 383/615 (62%), Gaps = 9/615 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIGGGHAGCEAA AA++G T L+T TI M CNP+IGG KG +VRE+DA Sbjct: 7 SYDVIVIGGGHAGCEAALAAARMGCKTLLLTINLDTIAYMPCNPSIGGPAKGIVVREVDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ DA IQ R+LN KGPAV+ R QAD+ Y L M+ + ENL + QG V Sbjct: 67 LGGQMGKNTDATYIQMRMLNTGKGPAVQALRAQADKAYYALNMKWTLERTENLHLKQGLV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 I +V + VVLTTGT+LRG I+IG++ +G G P+ L + Sbjct: 127 EELLVRNGRIYGVVTKSGQEFHAQAVVLTTGTYLRGRIYIGEVSYESGPNGQMPAIRLSD 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F R KTGTP R++ +I + K Q D FSF D Q+ C +T Sbjct: 187 CLVDLGFRLVRFKTGTPPRINKNSIDFSKLIAQPGDPVPRHFSFDPDTPVRDQVPCWLTG 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETHRII+EN+ S +YSG+IK GPRYCPSIEDK+VRF +R+ HQIFLEPEG +T Sbjct: 247 TTEETHRIILENLHRSPLYSGEIKGTGPRYCPSIEDKVVRFHDRDTHQIFLEPEGPHTCE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 Y G+ST+LPE++Q + + +IPGLE+ ++RPGYAIEYD + P +L+PTLETK + GLF Sbjct: 307 WYVQGLSTSLPEDVQLKILHSIPGLERAEMLRPGYAIEYDAVVPTQLWPTLETKLVEGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ+NGT+GYEEAA QG++AGIN+ARK + + SR+D+YIGVMIDDL +KG EPY Sbjct: 367 TAGQLNGTSGYEEAAGQGIMAGINAARKVKGEEPVVLSRSDAYIGVMIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAE+R+ LR DNAD RLT +G ++G + ER +++ +++ +++ L L Sbjct: 427 RLLTSRAEHRLLLRHDNADLRLTELGYRIGLVSER---AYSRVMRKKEGIQAELARLSRV 483 Query: 485 SKNLSSTSISFKQDGKT-----RTAYEFLSYPDFSIQNLFSICPDAR-KFSSLVIERLQI 538 + + G + + L P+ S + +I P + V E+++I Sbjct: 484 KVKPQEVNGRLAEWGSQPIESGMSLAQLLKRPELSYDQIRTIDPTGGVEIDPEVREQVEI 543 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E YA Y +Q + K E R +P++ DY + L+ E +EKLS ++P + QA++I Sbjct: 544 EIKYAGYIRKQNELIERQKRLEGRKLPENLDYMQIKGLAMEAREKLSRVRPRTVGQAARI 603 Query: 599 EGMTPAALNLLLIYI 613 G+TPA +++LL+Y+ Sbjct: 604 PGVTPADISILLVYL 618 >gi|224370296|ref|YP_002604460.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Desulfobacterium autotrophicum HRM2] gi|223693013|gb|ACN16296.1| GidA [Desulfobacterium autotrophicum HRM2] Length = 627 Score = 513 bits (1320), Expect = e-143, Method: Compositional matrix adjust. Identities = 280/621 (45%), Positives = 384/621 (61%), Gaps = 17/621 (2%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 ++YDVIV+G GHAGCEAA AA +G T L I +M C+P+IGG+ KG LV+EI Sbjct: 5 TKNYDVIVVGAGHAGCEAAIAAANMGCRTLLAAIDLDKIAAMPCSPSIGGMAKGQLVKEI 64 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G M +V+DA+ IQ+R LN +KGPAV RTQ D+ LY+ M++ + + NLD Q Sbjct: 65 DALGGKMAKVSDASAIQYRTLNTRKGPAVHSTRTQNDKRLYQATMKKIVETTLNLDFKQM 124 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 V E + + I + S VVL TGTFL+G++HIG KI AGR G+ S L Sbjct: 125 MVDQLVIENHRVIGIREETGFGYHGSAVVLATGTFLKGMVHIGTTKIHAGRAGEFSSIGL 184 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGI 242 S + F R+KTGTP RL TI + + +Q +D PFSF T + + I Sbjct: 185 AASLEREGFLLERMKTGTPPRLALSTIDFSEFSRQDSDPDPTPFSFSTTTVKGGMLPSFI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 TN TH ++ +N+KHSA+Y G I RYCPS EDKIV+F +R+ HQI LE EG ++ Sbjct: 245 GHTNTHTHDLVRQNLKHSALYGGSIIGKSARYCPSFEDKIVKFPDRDQHQIILEHEGTDS 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +Y +G+ +LP EIQ + +R++ GLE+ I+RP YAIEYDYINP+EL PTLETK+I+G Sbjct: 305 QEIYASGLGNSLPVEIQLEVVRSVKGLEQAEIMRPAYAIEYDYINPQELNPTLETKRING 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGT+GYEEAAAQGL AGIN+A + + R+++Y+GVMIDDL ++G E Sbjct: 365 LFFAGQINGTSGYEEAAAQGLWAGINAACMVKEQEPFLLDRSEAYMGVMIDDLVTRGTKE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIG----------ERRQKRFAKYIQEYN 472 PYRMFTSRAEYR+ LR DNAD RL G +LG + R K+ IQ + Sbjct: 425 PYRMFTSRAEYRLLLREDNADLRLAEKGHELGLVDGQALAAAREISRGTKKEMARIQSHV 484 Query: 473 FLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV 532 + + L + + K D + A D+S ++F+ P S + Sbjct: 485 VKPTPETNAWLNRAGSTPITTGLKLDQLLKRA-----GIDYSAVDVFAPSPST--IPSRI 537 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 ++++IE+ Y Y RQ+ E K+ K E+ IPKD ++ ++ LSNEL+EKL+ +KP +L Sbjct: 538 KKQVEIETKYEGYIARQLNEIKKFKDMERIKIPKDIEFKAIHGLSNELREKLTSVKPLSL 597 Query: 593 LQASKIEGMTPAALNLLLIYI 613 QAS+I+GMTPAAL+++LI I Sbjct: 598 GQASRIDGMTPAALSVILIAI 618 >gi|218291087|ref|ZP_03495110.1| glucose inhibited division protein A [Alicyclobacillus acidocaldarius LAA1] gi|218238972|gb|EED06179.1| glucose inhibited division protein A [Alicyclobacillus acidocaldarius LAA1] Length = 628 Score = 513 bits (1320), Expect = e-143, Method: Compositional matrix adjust. Identities = 275/612 (44%), Positives = 380/612 (62%), Gaps = 3/612 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIGGGHAGCEAA AA++G T L+T TI M CNP+IGG KG +VRE+DA Sbjct: 7 SYDVIVIGGGHAGCEAALAAARMGCRTLLLTINLDTIAYMPCNPSIGGPAKGIVVREVDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ DA IQ R+LN KGPAV+ R QAD+ Y L M+ + ENL + QG V Sbjct: 67 LGGQMGKNTDATYIQMRMLNTGKGPAVQALRAQADKAYYALNMKWTLERTENLHLKQGLV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 I +V + VVLTTGT+LRG I+IG++ +G G P+ L + Sbjct: 127 EELLVRNGRIYGVVTKSGQEFHAQAVVLTTGTYLRGRIYIGEVSYESGPNGQMPAIRLSD 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F R KTGTP R++ +I + K Q D FSF D Q+ C +T Sbjct: 187 CLVDLGFRLVRFKTGTPPRINKNSIDFSKLIAQPGDPVPRHFSFDPDTPVRDQVPCWLTG 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETHRII+EN+ S +YSG+IK GPRYCPSIEDK+VRF +R+ HQIFLEPEG +T Sbjct: 247 TTEETHRIILENLDRSPLYSGEIKGTGPRYCPSIEDKVVRFRDRDTHQIFLEPEGPHTCE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 Y G+ST+LPE++Q + + +IPGLE+ ++RPGYAIEYD + P +L+PTLETK + GLF Sbjct: 307 WYVQGLSTSLPEDVQLKILHSIPGLERAEMLRPGYAIEYDAVVPTQLWPTLETKLVEGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ+NGT+GYEEAA QG++AGIN+ARK + + SR+D+YIGVMIDDL +KG EPY Sbjct: 367 TAGQLNGTSGYEEAAGQGIMAGINAARKVKGEEPVVLSRSDAYIGVMIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAE+R+ LR DNAD RLT +G ++G + ER R + + + L + + Sbjct: 427 RLLTSRAEHRLLLRHDNADLRLTELGYRIGLVSERAYSRVMRKKEGIQAELARLSRVKVK 486 Query: 485 SKNLSSTSISFKQDG--KTRTAYEFLSYPDFSIQNLFSICPDAR-KFSSLVIERLQIESS 541 ++++ + + + L P+ S + + P + V E+++IE Sbjct: 487 PQDVNGRLVELGSQPIESGMSLAQLLKRPELSYDQIRGLDPTGGVEIDPEVQEQVEIEIK 546 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y +Q + K E R +P++ DY L L+ E +EKLS ++P + QA++I G+ Sbjct: 547 YAGYIRKQNELIERQKRLEGRKLPENLDYMQLKGLAMEAREKLSRIRPRTVGQAARIPGV 606 Query: 602 TPAALNLLLIYI 613 TPA +++LL+Y+ Sbjct: 607 TPADISILLVYL 618 >gi|210624043|ref|ZP_03294160.1| hypothetical protein CLOHIR_02112 [Clostridium hiranonis DSM 13275] gi|210153250|gb|EEA84256.1| hypothetical protein CLOHIR_02112 [Clostridium hiranonis DSM 13275] Length = 629 Score = 513 bits (1320), Expect = e-143, Method: Compositional matrix adjust. Identities = 268/616 (43%), Positives = 382/616 (62%), Gaps = 7/616 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYD++V+G GHAGCEAA +A++G TA+IT +I +++CNP+IGG GKGHLVREIDA Sbjct: 8 SYDIVVVGAGHAGCEAALASARMGHKTAMITMSLDSIAALACNPSIGGTGKGHLVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG D IQ R+LN KGPAV RTQAD+ Y M++ I +QENLD+I EV Sbjct: 68 LGGEMGLNIDKTFIQSRMLNTAKGPAVHSLRTQADKFRYHEEMKKTIENQENLDLIMDEV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + ++ ++ + ++ R +L TG +L I IG++ G + L + Sbjct: 128 VEIAHDGQTVTGVITRMGAIYRAKATILATGVYLNSKIFIGEVSFNEGPNALGYAAYLTD 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S + R KTGTP R+ ++ + K ++Q D +++PFSFM DKI Q+ C +TR Sbjct: 188 SLKELGLRMRRFKTGTPCRVHRDSVDFSKMDRQDGDAKIVPFSFMNDKIEREQVPCYLTR 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ET ++I ENIK SA+Y G+I+ GPRYCPSIEDKIVRF ++ HQIF+EPEGLNT Sbjct: 248 TTAETKQMIEENIKRSAMYGGEIEGVGPRYCPSIEDKIVRFSDKETHQIFIEPEGLNTKE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+ST+LP EIQ +T+ GLE V ++RP YAIEYD I+P +L LE K + LF Sbjct: 308 MYVQGLSTSLPFEIQKDMYKTVLGLENVKVMRPAYAIEYDCIDPTQLKLNLEIKGVENLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ NGT+GYEEAAAQGL+AGIN+ RK + R+++YIGV++DDL +KG EPY Sbjct: 368 SAGQFNGTSGYEEAAAQGLIAGINAVRKIEGKEPFTLDRSEAYIGVLLDDLVTKGTNEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF--AKYIQEYNFLRSLLKSLV 482 RM TSR EYR+ LR DNAD RLT G ++G + E R +++ K + E F R LK + Sbjct: 428 RMMTSRCEYRLYLRQDNADMRLTEKGYEIGLVTEERYQKYLAKKEMVEKEFER--LKEVR 485 Query: 483 LTSK--NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA-RKFSSLVIERLQIE 539 +T K N + F + + YEFL P+ + + A V E+ I Sbjct: 486 VTPKESNEVMEAHGFAKLNVGLSLYEFLKRPEVDYALIDELGKGAGDDVPDYVKEQCVIV 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + Y Y +Q+ + + K E + + + +YS + L E ++KL +KP ++ QAS+I Sbjct: 546 TKYEGYIDKQLKQIDQFKKLESKKLSESINYSEIEGLRLEARQKLDAIKPNSVGQASRIS 605 Query: 600 GMTPAALNLLLIYIKK 615 G++PA +++LL+Y+++ Sbjct: 606 GVSPADISVLLVYLEQ 621 >gi|186686455|ref|YP_001869651.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Nostoc punctiforme PCC 73102] gi|186468907|gb|ACC84708.1| glucose inhibited division protein A [Nostoc punctiforme PCC 73102] Length = 670 Score = 513 bits (1320), Expect = e-143, Method: Compositional matrix adjust. Identities = 268/627 (42%), Positives = 377/627 (60%), Gaps = 29/627 (4%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+G GH+GCEAA +A+LG T L+T I CNPA+GG K L E+DA Sbjct: 42 AFDVIVVGAGHSGCEAALASARLGCRTLLLTLNLDRIAWQPCNPAVGGPAKSQLTHEVDA 101 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G +G+VAD +Q R+LN +GPAV R Q D+ Y M+ + +QENL + Sbjct: 102 LGGEIGKVADRTYLQKRILNSSRGPAVWALRAQTDKREYAAVMKNIVENQENLTI----- 156 Query: 125 AGFNTEKNIISSIVMQDNSMI-----------RCSTVVLTTGTFLRGVIHIGKLKIPAGR 173 +++++ +V+ N + RC V+LTTGTFL G I +G +PAGR Sbjct: 157 -----RESMVTDLVLGANDEVIGVETYFGVGFRCKAVILTTGTFLGGKIWVGNKSMPAGR 211 Query: 174 MGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI 233 G+ + L + + F+TGRLKTGTPAR+D +++ + K Q DE + FSF + Sbjct: 212 AGEFAAEGLTQTLNRLGFETGRLKTGTPARVDKRSVDYSKMLIQPGDEDVRWFSFDPEAW 271 Query: 234 TNR-QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQ 292 R Q+ C ITRT ETHR+I +N+ S +Y G +++ GPRYCPSIEDKIVRF ++ HQ Sbjct: 272 VEREQMPCYITRTTTETHRLIQDNLHLSPVYGGWVEAKGPRYCPSIEDKIVRFADKESHQ 331 Query: 293 IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF 352 IF+EPEG + +Y G ST LPE +Q Q +RT+PGLEK ++RP YA+EYDY+ + + Sbjct: 332 IFIEPEGRDIPELYIQGFSTGLPENLQLQMLRTLPGLEKCVMLRPAYAVEYDYLPATQCY 391 Query: 353 PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMI 412 PTL TKK++GLF AGQINGTTGYEEAAAQGLVAGIN+AR + + I F+R SYIG ++ Sbjct: 392 PTLMTKKVAGLFCAGQINGTTGYEEAAAQGLVAGINAARFVHSQEMIVFAREQSYIGTLV 451 Query: 413 DDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYN 472 DDL +K + EPYRM TSR+EYR+ LR DNAD RLT +G ++G I +RR F + ++ N Sbjct: 452 DDLCTKDLREPYRMLTSRSEYRLLLRSDNADQRLTTLGREIGLIDDRRWDLFTQ--KQAN 509 Query: 473 FLRSLLKSLVLTSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARK 527 + + K I+ D + T + L P F +L Sbjct: 510 IITEKQRLQATRVKEHDEMGIAIASDTQQAIKGSITLNDLLRRPGFHYVDLDRFGLGNPN 569 Query: 528 FSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSIL 587 + E +I+ Y Y RQ + +I + R +P D DY+++ LS E +EKL+ + Sbjct: 570 LNRAEKEGAEIDIKYYGYLARQQNQIDQIARQAHRQLPADLDYTTIDTLSKEAREKLTHV 629 Query: 588 KPFNLLQASKIEGMTPAALNLLLIYIK 614 KP L QA++I G+ PA +N LL+Y++ Sbjct: 630 KPLTLGQAARIGGVNPADVNALLLYLE 656 >gi|89897800|ref|YP_521287.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Desulfitobacterium hafniense Y51] gi|122480418|sp|Q24M99|MNMG_DESHY RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|89337248|dbj|BAE86843.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 637 Score = 513 bits (1320), Expect = e-143, Method: Compositional matrix adjust. Identities = 272/626 (43%), Positives = 380/626 (60%), Gaps = 20/626 (3%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAGCEAA AA++G T LIT I M CNP++GG KGHLVREIDA Sbjct: 7 NYDVIVVGAGHAGCEAALAAARMGGRTLLITLSLDNIAHMDCNPSLGGPAKGHLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG AD +Q R+LN KGPAV R Q+D++ Y L M+ IL QENL + Q V Sbjct: 67 LGGQMGITADETSLQVRMLNTGKGPAVHALRIQSDKQAYHLHMRNAILGQENLVLHQALV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 TE +S +V + + V+LT+GT+LRG I IG G G + +L Sbjct: 127 ERIKTEDGKVSGVVTRTGAFYAAPNVILTSGTYLRGRIIIGDAMYEGGPNGQQTAMNLSG 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM------TDKITNRQI 238 + + + GR KTGTP R+ +++ + K Q D +SFM + ++QI Sbjct: 187 ALKELGLELGRFKTGTPPRIHRRSVDYTKFTVQPGDSVPWRYSFMPTQSMFWGRDVDKQI 246 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C + T ETH+II +NI + +YSG I+ GPRYCPSIEDK+VRF +R HQIFLEPE Sbjct: 247 PCWLGYTTPETHQIIQDNIHRAPLYSGKIEGIGPRYCPSIEDKVVRFADRPTHQIFLEPE 306 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 G N+D +Y G+ST++PEEIQ+ I +IPGLEK ++RPGYAIEYDY+ P +L +LE + Sbjct: 307 GWNSDELYVAGLSTSMPEEIQYDIIHSIPGLEKAELLRPGYAIEYDYVKPYQLSLSLEVR 366 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 +I GLF AGQ+NGT+GYEEAAAQGL+AGIN+A + + R++ Y+GV+IDDL +K Sbjct: 367 RIPGLFTAGQLNGTSGYEEAAAQGLLAGINAALRVQGKEPFIVRRSEGYLGVLIDDLVNK 426 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAK---YIQEYNFL- 474 GV EPYR+ TSRAEYR+ LR DNAD RLTP G ++G + + R F K I E N L Sbjct: 427 GVKEPYRLLTSRAEYRLILRQDNADLRLTPRGREVGLVKDERWAAFQKKKAAIAEINALW 486 Query: 475 -----RSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFS 529 L + L + S + G+ E + P+ +I + + P ++ Sbjct: 487 RGTTFSPLNEHLAEVLAGVHSAPVHGGISGE-----ELMRRPEITINEIKQLIPQLAEYD 541 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 + IE YA Y +Q+ E + E+R+IP++ Y + LS E +++L + P Sbjct: 542 EEALLEAGIEIKYAGYIEKQLAEIERFAKMEERMIPEEIVYDQIKGLSTEGRQRLKEVAP 601 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKK 615 N+ QA++I G+TPA +++LL+Y+++ Sbjct: 602 ANMGQATRITGVTPADISVLLVYLEQ 627 >gi|241889411|ref|ZP_04776712.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Gemella haemolysans ATCC 10379] gi|241863954|gb|EER68335.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Gemella haemolysans ATCC 10379] Length = 627 Score = 512 bits (1319), Expect = e-143, Method: Compositional matrix adjust. Identities = 271/617 (43%), Positives = 379/617 (61%), Gaps = 7/617 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIGGGHAG EAA A++ G T +IT TIG M CNP++GG KG +VRE+D Sbjct: 6 KEYDVIVIGGGHAGIEAAHAASRKGVKTLMITINLDTIGFMPCNPSVGGPAKGIVVREVD 65 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL GLMGRVAD IQ ++LN KGPAVR R Q+D+ Y+L M+R + NLD+ Q Sbjct: 66 ALGGLMGRVADKTNIQSKMLNTAKGPAVRALRMQSDKVEYQLEMKRILEDTPNLDIEQAM 125 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E N + + + + T+++TTGT+LRG I IG +K +G PS L Sbjct: 126 VRELIIEDNKVVGLRTMLGTAYKAKTIIITTGTYLRGEIVIGDIKYSSGPNHQMPSIDLA 185 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + FD R KTGTP R++ ++ + KT Q D+ FS+ T + Q+ C +T Sbjct: 186 KQLEELGFDLVRFKTGTPPRVNADSVDFSKTAIQPGDDEEHAFSYETKEFVKDQVPCWLT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG NT Sbjct: 246 YTNTSTHEIIDKNLGRSAMYSGVIKGTGPRYCPSIEDKYVRFNDKERHQLFLEPEGRNTK 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G+ST+LP+++Q +R+I GLE I+R GYAIEYD +NP L+PTLETK I GL Sbjct: 306 EIYVQGLSTSLPDDVQRDMVRSIAGLENAVIMRNGYAIEYDAVNPTTLWPTLETKLIDGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGT+GYEEAA QG++AGIN+A K + + R ++YIGV+IDDL +KG EP Sbjct: 366 FTAGQINGTSGYEEAAGQGIMAGINAACKVLGEEPMILGRDEAYIGVLIDDLVTKGTNEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAK----YIQEYNFLRSL-L 478 YR+ TSRAE+R+ LR DNAD RLT G + E R F + E L++ + Sbjct: 426 YRLLTSRAEHRLLLRHDNADMRLTEKAYNYGLVTEERYNIFCEKRSMVADEIERLKTFRI 485 Query: 479 KSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 T + L+ + + +DG A + L P+ S N+ + D V+E+++I Sbjct: 486 TPTAATLEKLAELNSAEIRDGI--LAIDMLRRPELSHANVLYLANDKTVLPKDVVEQVEI 543 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E Y Y + + + +++K + IP D +Y +P+L+ E +EKL + P + QAS+I Sbjct: 544 EVKYEGYIKKSIQQVEKLKKMNEMKIPTDLNYDDVPSLALEAREKLKKVLPLTIGQASRI 603 Query: 599 EGMTPAALNLLLIYIKK 615 G+ PA +++LL+Y+++ Sbjct: 604 SGVNPADISILLVYLEQ 620 >gi|33866912|ref|NP_898471.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Synechococcus sp. WH 8102] gi|81170585|sp|Q7U3P8|MNMG_SYNPX RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|33639513|emb|CAE08897.1| glucose inhibited division protein A [Synechococcus sp. WH 8102] Length = 641 Score = 512 bits (1319), Expect = e-143, Method: Compositional matrix adjust. Identities = 272/618 (44%), Positives = 379/618 (61%), Gaps = 8/618 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 S+DVIV+GGGHAGCEAA AA+LG +TAL T I CNPA+GG K LV E+DA Sbjct: 10 SFDVIVVGGGHAGCEAAITAARLGLNTALFTLNLDRIAWQPCNPAVGGPAKSQLVHEVDA 69 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G++GR+AD IQ R+LN +GPAV R Q D+ LY M + + NL + + V Sbjct: 70 LGGVIGRLADGTAIQKRILNASRGPAVWALRAQTDKRLYSHQMLQLLQHTPNLALREAMV 129 Query: 125 AGFNT----EKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 G T ++ IS I S+ V+LT GTFL G I +G + AGR G+ + Sbjct: 130 TGLETTAEADQQRISGIRTYFGSVYGAEAVILTAGTFLGGRIWVGHQSMAAGRAGEQAAE 189 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSF-MTDKITNRQIE 239 L + + F T RLKTGTPAR+D ++I D+ E+Q +D FSF ++ Q+ Sbjct: 190 GLTEALQQLGFQTDRLKTGTPARVDRRSIALDQLEEQPSDAADHFFSFDPAAWVSGEQMS 249 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C ITRT ETH++I +N+ +AIY G I S GPRYCPSIEDKIVRF +++ HQIFLEPEG Sbjct: 250 CHITRTTAETHQLIRDNLHLTAIYGGVIDSKGPRYCPSIEDKIVRFADKDSHQIFLEPEG 309 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 +T +Y G ST LPE IQ Q +R++PGLE+ ++RP Y+++YDY+ +L P+LETK+ Sbjct: 310 RDTPEIYVQGFSTGLPEPIQLQLLRSLPGLEQAVMLRPAYSVDYDYLPATQLKPSLETKR 369 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 + GLF AGQ+NGTTGYEEAAAQGLVAG+N+AR + + F R SYIG MIDDL SK Sbjct: 370 VRGLFSAGQLNGTTGYEEAAAQGLVAGVNAARHIGGQEPVHFPREGSYIGTMIDDLVSKD 429 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 + EPYR+ TSR+EYR+ LR DNAD RLTP+G LG I +RR + F +Q + L+ Sbjct: 430 LREPYRVLTSRSEYRLILRGDNADRRLTPLGRDLGLIDDRRWQLFEDKLQAMEREKQRLE 489 Query: 480 SLVLTSKNLSSTSISFKQDGKTR---TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 ++ L + + ++ + + T + L P +L V E Sbjct: 490 TVRLKVSDPVAPAVEEETGAAIKGSITLADLLRRPGMHAADLVRHGLADADLPLPVREGA 549 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y+ Y RQ + ++K + +R +P D +Y+ + LSNE +EKL ++P L QAS Sbjct: 550 EIDIKYSGYLQRQQQQIDQVKRQSQRKLPADLNYAGIGTLSNEAREKLGSIQPTTLGQAS 609 Query: 597 KIEGMTPAALNLLLIYIK 614 +I G++ A + LL++++ Sbjct: 610 RIPGVSQADITALLMWLE 627 >gi|154688206|ref|YP_001423367.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus amyloliquefaciens FZB42] gi|166222906|sp|A7ZAW0|MNMG_BACA2 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|154354057|gb|ABS76136.1| GidA [Bacillus amyloliquefaciens FZB42] Length = 628 Score = 512 bits (1319), Expect = e-143, Method: Compositional matrix adjust. Identities = 270/618 (43%), Positives = 378/618 (61%), Gaps = 7/618 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAG EAA +A+ GA T ++T + M CNP++GG KG +VREIDAL Sbjct: 8 YDVIVIGAGHAGVEAALASARQGAKTLVLTINLDMVAFMPCNPSVGGPAKGIVVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M R D IQ R+LN KGPAVR R QAD+ Y+ M+ + NL ++QG Sbjct: 68 GGEMARNIDKTHIQMRMLNTGKGPAVRALRAQADKFQYQHEMKHTLEKTPNLTLLQGIAE 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E ++ Q + + TVVLTTGT+LRG I +G L +G PS L Sbjct: 128 RLIIEDGECRGVITQTGAEYKAKTVVLTTGTYLRGRIILGDLSYSSGPNNQQPSIKLSEH 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + FD R KTGTP R+ +I + KTE Q D FS+ T + Q+ C +T T Sbjct: 188 LEELGFDLVRFKTGTPPRVSSDSIDYSKTEIQPGDPVPRAFSYETVEYITDQLPCWLTYT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 + ETH II N+ S +YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT V Sbjct: 248 SPETHEIIDSNLHRSPMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQEV 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+ST+LPE++Q + + TIPGLEKV ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 308 YVQGLSTSLPEDVQQRMLATIPGLEKVQMMRAGYAIEYDAIVPTQLWPTLETKKIPNLYT 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGT+GYEEAA QG++AGIN+ RK+ + + SR+D+YIGV+IDDL +KG EPYR Sbjct: 368 AGQINGTSGYEEAAGQGIMAGINAGRKALGKEEVILSRSDAYIGVLIDDLVTKGTNEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL-- 483 + TSRAEYR+ LR DNAD RLT IG +G I + R + F K + L S+++ Sbjct: 428 LLTSRAEYRLLLRHDNADLRLTEIGHDIGLISDERYEAFEKKKAAIEAEKKRLWSVIIKP 487 Query: 484 ---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + + S S +DG T + + P+ + + + + P V E+++I+ Sbjct: 488 SPENQEYIRSLGGSELKDGVRGT--DLMKRPEMNYETVTKLAPADSPVPQDVAEQVEIQV 545 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y + + + +++K E + IP DY ++ ++ E ++KL ++P ++ QAS+I G Sbjct: 546 KYEGYIEKSLQQVEKLKKMENKKIPDRIDYDAIKGIATEARQKLKEVRPLSVAQASRISG 605 Query: 601 MTPAALNLLLIYIKKNTV 618 + PA +++LL+Y+++ + Sbjct: 606 VNPADISILLVYLEQGRI 623 >gi|154503057|ref|ZP_02040117.1| hypothetical protein RUMGNA_00879 [Ruminococcus gnavus ATCC 29149] gi|153796298|gb|EDN78718.1| hypothetical protein RUMGNA_00879 [Ruminococcus gnavus ATCC 29149] Length = 635 Score = 512 bits (1319), Expect = e-143, Method: Compositional matrix adjust. Identities = 272/622 (43%), Positives = 387/622 (62%), Gaps = 16/622 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+++G GHAGCEAA A++G T + T +I M CNP IGG KGHLV+E+DAL Sbjct: 15 YDVVIVGAGHAGCEAALACARMGFQTLMFTVSVDSIALMPCNPNIGGSSKGHLVKEVDAL 74 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+V D IQ ++LN KGPAV R QAD+ Y M++ + QENL++ Q EV Sbjct: 75 GGEMGKVIDRTFIQSKMLNSSKGPAVHSLRAQADKANYSKTMRKVLEDQENLEIKQMEVT 134 Query: 126 GFNTE-----KNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 E K II+ + + RC VVL TGT+L+ G + + G G P+N Sbjct: 135 EILAEDGADGKKIITGVRTYSGATYRCRAVVLCTGTYLKARCIYGDVSMQTGPNGLQPAN 194 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KITNRQI 238 L +S + + R KTGTPAR+D ++I + K E+Q DER++PFSF TD I Q+ Sbjct: 195 YLTDSLKELGIEMYRFKTGTPARIDKRSIDFSKMEEQKGDERIVPFSFTTDPEDIQIDQV 254 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C +T TN +TH II EN+ S ++SG I+ GPRYCPSIEDK+V+F ++N HQ+F+EPE Sbjct: 255 SCWLTYTNEKTHEIIRENLDRSPLFSGMIEGTGPRYCPSIEDKVVKFADKNRHQVFIEPE 314 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL+T+ +Y G+S++LPE++Q+ R++PGLE I+R YAIEYD I+ ++L TLE K Sbjct: 315 GLDTNEMYVGGMSSSLPEDVQYAMYRSVPGLEHAKIVRNAYAIEYDCIDARQLKSTLEFK 374 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 + GLF GQ NG++GYEEAAAQGLVAGIN+ARK + I R++ YIGV+IDDL +K Sbjct: 375 NVEGLFSGGQFNGSSGYEEAAAQGLVAGINAARKLQGKEGIIIDRSEGYIGVLIDDLVTK 434 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 EPYRM TSRAEYR+ LR DNAD RLT IG ++G I E R + K ++ + Sbjct: 435 ESHEPYRMMTSRAEYRLLLRQDNADLRLTKIGYEVGLIEEERYQNLLKKEEQIQKEIERV 494 Query: 479 KSL-VLTSKNLSSTSISFKQDGKT-----RTAYEFLSYPDFSIQNLFSICPDARKFSSLV 532 +S+ V T+K + + G T + + + P+ S + L S+ + V Sbjct: 495 ESVHVGTTKEVQEL---LESCGSTPLVSGASLADLIRRPELSYEILASVDKMRPELKYDV 551 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 E++ I Y Y RQ + ++ K EK+ IP D +Y + +L E K+KLS ++P ++ Sbjct: 552 AEQVNINIKYEGYIKRQKKQVEQFKKLEKKRIPADINYEEVQSLRLEAKQKLSQIRPASI 611 Query: 593 LQASKIEGMTPAALNLLLIYIK 614 QAS+I G++PA +++LL+Y++ Sbjct: 612 GQASRISGVSPADISVLLVYLE 633 >gi|123969416|ref|YP_001010274.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prochlorococcus marinus str. AS9601] gi|166222719|sp|A2BTQ6|MNMG_PROMS RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|123199526|gb|ABM71167.1| Glucose inhibited division protein A [Prochlorococcus marinus str. AS9601] Length = 655 Score = 512 bits (1319), Expect = e-143, Method: Compositional matrix adjust. Identities = 283/637 (44%), Positives = 384/637 (60%), Gaps = 23/637 (3%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 N S+DVIVIGGGHAGCEAA AKLG STAL T I CNPA+GG K LV E+ Sbjct: 8 NESFDVIVIGGGHAGCEAAITTAKLGFSTALFTINLDRIAWQPCNPAVGGPAKSQLVHEV 67 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENL----- 117 DAL G++G++AD IQ R+LN +GPAV R Q D+ Y M + + +NL Sbjct: 68 DALGGIIGKLADETAIQKRILNASRGPAVWALRAQTDKREYSKKMIEILQNTDNLSLKEA 127 Query: 118 -----DVIQGEVAGFNTEKNI---ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKI 169 D+ + E G N++K + I + S +V++T GTFL G I IG + Sbjct: 128 MITELDIAKTEQIGLNSKKILKKRIKGVKTFFGSYYSARSVIITAGTFLEGRIWIGNKSM 187 Query: 170 PAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM 229 AGR G+ + L + + T RLKTGTPAR+D ++II+D+ + Q + FSF Sbjct: 188 SAGRSGEQAAQGLTQNLHEIGIKTERLKTGTPARVDKRSIIFDELDVQPSTAVDKYFSFD 247 Query: 230 TDKITNR-QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGER 288 D N Q+ C ITRT +TH++I +N+ + IY G I S GPRYCPSIEDKIV+F + Sbjct: 248 PDIKNNMPQVSCHITRTTTKTHQLIRDNLHLTPIYGGFIDSKGPRYCPSIEDKIVKFANK 307 Query: 289 NGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINP 348 HQIFLEPEG+NT +Y G ST LPE IQ + +RT+PGL + ++RP YA+EYDYI Sbjct: 308 ESHQIFLEPEGINTPEIYVQGFSTGLPENIQLELLRTLPGLGECKMLRPAYAVEYDYIPA 367 Query: 349 KELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYI 408 +L +LETK+I LF AGQINGTTGYEEAAAQGLVAG+N+ RK NK D I FSR SYI Sbjct: 368 TQLQTSLETKEIEYLFSAGQINGTTGYEEAAAQGLVAGVNATRKLNKKDPIIFSRESSYI 427 Query: 409 GVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYI 468 G MI+DL +K + EPYR+ TSR+EYR++LR DNAD RLTP+G ++G I E KR++ Y Sbjct: 428 GTMINDLITKDLKEPYRVLTSRSEYRLTLRGDNADRRLTPLGYQIGLINE---KRWSAYQ 484 Query: 469 QEYNFLRS---LLKSLVLTSKNLSSTSISFKQDGKTR---TAYEFLSYPDFSIQNLFSIC 522 ++ N L L + L + + S I + K + T E L P+F +L Sbjct: 485 EKMNLLEEEKFRLNNTRLKNTDEISKKIELETGSKIKGSTTLKELLKRPNFHYSDLIKYN 544 Query: 523 PDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKE 582 + R S + E ++I+ Y Y RQ ++I + + +P++ +Y + LS E +E Sbjct: 545 LNERNLGSSIQEGVEIDIKYEGYLKRQKNNIEQINRQSCKSLPQEINYEKIETLSLEARE 604 Query: 583 KLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 L+ +KP N ASKI G++ A L LL+++K +K Sbjct: 605 NLNKIKPKNFGDASKIPGVSKADLTALLVWLKIREIK 641 >gi|126642227|ref|YP_001085211.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Acinetobacter baumannii ATCC 17978] Length = 599 Score = 512 bits (1318), Expect = e-143, Method: Compositional matrix adjust. Identities = 273/596 (45%), Positives = 370/596 (62%), Gaps = 6/596 (1%) Query: 27 LGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVK 86 +G T L+TH T+G MSCNPAIGG+GK HLVREIDAL G M AD GIQFR+LN + Sbjct: 1 MGRQTLLLTHNIETLGQMSCNPAIGGIGKSHLVREIDALGGAMALAADKGGIQFRILNSR 60 Query: 87 KGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIR 146 KG AVR R QADR Y+ A++ + +Q NLD+ Q E + + +V Q Sbjct: 61 KGAAVRATRAQADRVRYKAAIRETLENQANLDIFQQAADDLIVEGDTVKGVVTQMGIRFD 120 Query: 147 CSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDG 206 TVVLTTGTFL GVIH+G K GR GD PS +L + GRLKTGTP R+D Sbjct: 121 AKTVVLTTGTFLGGVIHVGLEKSSGGRAGDPPSIALAQRLRELKLPVGRLKTGTPPRIDA 180 Query: 207 KTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGITRTNLETHRIIMENIKHSAIYSG 265 +++ + Q D SFM D + Q+ C IT TN +TH II + S +Y+G Sbjct: 181 RSVDFSVMTPQPGDFPSPVMSFMGDVSMHPEQVNCYITHTNEKTHDIIRGGLDRSPMYTG 240 Query: 266 DIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRT 325 I+ GPRYCPSIEDKI RF +++ HQ+FLEPEGL+T +YPNGIST+LP ++Q + +R+ Sbjct: 241 VIEGVGPRYCPSIEDKIHRFSDKDSHQVFLEPEGLDTHELYPNGISTSLPFDVQFELVRS 300 Query: 326 IPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVA 385 I G+E +I+RPGYAIEYDY NP+ L TLETK I+GL+ AGQINGTTGYEEA AQGL+A Sbjct: 301 IRGMENAHILRPGYAIEYDYFNPQALKFTLETKAINGLYFAGQINGTTGYEEAGAQGLLA 360 Query: 386 GINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNR 445 G+N+AR++ + + R +Y+GV++DDL + G EPYRMFTSRAEYR+ LR DNAD R Sbjct: 361 GLNAARRAWEQEEWTPKRDQAYMGVLVDDLITLGTKEPYRMFTSRAEYRLMLREDNADQR 420 Query: 446 LTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSS---TSISFKQDGKTR 502 LT IG +LG + + R + + ++ S L+ L N ++ K Sbjct: 421 LTTIGRELGLVDDVRWAAYCEKMEAVERETSRLQHLWAAPNNPMGKKFVEMTGADLSKEC 480 Query: 503 TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKR 562 +A + L P+ + + + + S V E+++I Y Y RQ + ++K E+ Sbjct: 481 SAIDLLKRPNINFSQIAELT--GSEVSQQVGEQIEIAVKYEGYINRQHEDVAQLKRLEET 538 Query: 563 LIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTV 618 IP DFDY + LS E+ +KL ++P L QAS+I G+TPAA+ L++I I+KN + Sbjct: 539 KIPADFDYDVVSGLSREITQKLKTVRPETLAQASRIPGVTPAAVQLVMITIRKNNM 594 >gi|33519484|ref|NP_878316.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Candidatus Blochmannia floridanus] gi|81170525|sp|Q7VQW3|MNMG_BLOFL RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|33517147|emb|CAD83529.1| glucose inhibited division protein [Candidatus Blochmannia floridanus] Length = 634 Score = 512 bits (1318), Expect = e-143, Method: Compositional matrix adjust. Identities = 276/618 (44%), Positives = 390/618 (63%), Gaps = 7/618 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVI++GGGHAG E+A ++++ T LITH TIG MSCNP+IGG+GKGHLV+E+DA Sbjct: 6 NFDVIIVGGGHAGTESALASSRMKCKTLLITHNVDTIGQMSCNPSIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 + G+M + D +GIQFR+LN +KG AV+ R QAD+ LYR A++ + Q++L ++Q V Sbjct: 66 MGGIMAKAIDQSGIQFRILNTRKGAAVKSTRAQADKILYRQAIRHALEIQDSLFILQASV 125 Query: 125 AGFNTEKNIISSIVMQDNSM-IRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGD-SPSNSL 182 ++N + +V+ ++ I +VVLTTGTFL G IHIG GR GD S+SL Sbjct: 126 EDLIIKQNKVIGVVIPKIAIEIYAKSVVLTTGTFLNGKIHIGMNNFKGGRSGDLESSSSL 185 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECG 241 F RLKTGT R+ K + +D Q +D L FSF + +QI C Sbjct: 186 SQKLRDLSFRINRLKTGTSPRIHAKGVNFDCMSVQNSDSPLPVFSFTGSFEQHPKQIPCY 245 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 T TN +TH II N+ S +YSG I PRYCPSIEDK+VRF +R+ HQ+FLEPEGL Sbjct: 246 STYTNKKTHDIIRLNLNQSPVYSGLINGISPRYCPSIEDKVVRFSDRDAHQVFLEPEGLT 305 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T +Y NG+ST+LP IQ + I +I GLE +IIRPGYAIEYD+ +P++L TLE+K IS Sbjct: 306 TSEIYVNGVSTSLPFNIQTEIIHSIFGLENAHIIRPGYAIEYDFFDPRDLKLTLESKFIS 365 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLFL+GQINGTTGYEEAAAQG++AGIN+AR R +Y+GV++DDL + G Sbjct: 366 GLFLSGQINGTTGYEEAAAQGILAGINAARYVQNKPGWYPRRDQAYLGVLVDDLCTYGTK 425 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSR+EYR+SLR DNAD RLT + + G I + R + F + R L++ Sbjct: 426 EPYRMFTSRSEYRLSLREDNADLRLTTVAREFGLIDDNRWRIFCLKQENIEKERQRLRNT 485 Query: 482 VL--TSKNLSSTSISFKQDGKTRTAYE-FLSYPDFSIQNLFSICP-DARKFSSLVIERLQ 537 + S+++ + K + + E L P+ + L + + K V E+++ Sbjct: 486 YIFPYSEDIVQLNRFLNSPIKNKVSGEDLLKRPEMNYVKLMQLNTFQSVKLDYQVFEQVE 545 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ Y+ Y RQ E K+ + E L+P D +Y + LS E+ +K + +P+++ QAS+ Sbjct: 546 IQIKYSGYLLRQQEEIKKYLYYENTLLPIDINYHDIAGLSKEVIDKFNDCRPYSIGQASR 605 Query: 598 IEGMTPAALNLLLIYIKK 615 I G+TPAA++ +LI++KK Sbjct: 606 IPGVTPAAISNVLIWLKK 623 >gi|327398258|ref|YP_004339127.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Hippea maritima DSM 10411] gi|327180887|gb|AEA33068.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Hippea maritima DSM 10411] Length = 628 Score = 512 bits (1318), Expect = e-143, Method: Compositional matrix adjust. Identities = 274/626 (43%), Positives = 389/626 (62%), Gaps = 23/626 (3%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIGGGHAGCEA+ + A+LG +T L+T +IG+MSCNPAIGGL KGHLV+E+D Sbjct: 5 KRYDVIVIGGGHAGCEASLINARLGLNTLLLTIALDSIGAMSCNPAIGGLAKGHLVKEVD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 G M R D G+QF++LN KGPAV R QAD Y+L M+ + Q++LD+ Q Sbjct: 65 IFGGEMARNIDETGLQFKILNRSKGPAVWSSRAQADMTAYKLRMKYTLERQDHLDIKQET 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E N + + + C+ VV+TTGTF++G I IG + AGR + PS L Sbjct: 125 VDEIIVEDNRVVGVKTHLGNEYYCNAVVVTTGTFMKGKIFIGLNEYEAGRAWEPPSRKLS 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 +S + RLKTGT RLD +TI +D Q D+ +PFSF T ++ + C +T Sbjct: 185 DSLRRLGLRVSRLKTGTTPRLDARTIDFDALIPQPGDDDPVPFSFRTKQLNRPNVPCYLT 244 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH +I++N+ S +YSG ++S GPRYCPSIEDK+V+F E+ HQIFLEP+ + Sbjct: 245 YTNERTHEVILKNLDQSPLYSGMVESVGPRYCPSIEDKVVKFFEKKQHQIFLEPQDEKST 304 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y +G+ T++ E+Q F+RTI GLEKV I+RPGYAIEYD+++P +L +LETKKI GL Sbjct: 305 EIYADGLHTSMGYEVQLNFLRTIKGLEKVEIMRPGYAIEYDFVDPTQLKHSLETKKIRGL 364 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 FLAGQINGT+GYEEAAAQG+VAGIN+A + + R ++Y GV+IDDL +KG EP Sbjct: 365 FLAGQINGTSGYEEAAAQGIVAGINAAFYLMEKEPFILRRDEAYTGVLIDDLVTKGTKEP 424 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DN RL K G + + +E+ ++ + Sbjct: 425 YRMFTSRAEYRLILREDNTHLRLAEKSFKAGLLDK----------EEFEMIQEQKTKIEE 474 Query: 484 TSKNLSSTSISFKQDG------------KTRTAY-EFLSYPDFSIQNLFSICPDARKFSS 530 T K L +T I +D KT+T + L + + L + P+ + + Sbjct: 475 TIKKLKTTHIFPTEDTNKKLKELGTEIIKTKTDLAKLLRRTEVNYDKLRELLPELEELDN 534 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 + + ++I+ Y Y Q + ++ K E IP++FDY+ + LSNE++ KL +KP Sbjct: 535 YIKQEVEIDIKYEGYLTLQKQQIEKFKKYENMKIPENFDYTKVGGLSNEVRGKLMEVKPT 594 Query: 591 NLLQASKIEGMTPAALNLLLIYIKKN 616 ++ QA +I G+TPAA+++L+IY+KK+ Sbjct: 595 SIGQAMRISGVTPAAISILMIYLKKH 620 >gi|237743015|ref|ZP_04573496.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG 2 [Fusobacterium sp. 7_1] gi|260495537|ref|ZP_05815662.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Fusobacterium sp. 3_1_33] gi|229433575|gb|EEO43787.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG 2 [Fusobacterium sp. 7_1] gi|260196879|gb|EEW94401.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Fusobacterium sp. 3_1_33] Length = 633 Score = 512 bits (1318), Expect = e-143, Method: Compositional matrix adjust. Identities = 273/630 (43%), Positives = 380/630 (60%), Gaps = 21/630 (3%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +D+IV+G GHAGCEAA +A++G TA+ T TIG MSCNP++GG K HL REID Sbjct: 2 QEFDIIVVGAGHAGCEAALASARMGMKTAIFTISLDTIGVMSCNPSLGGPAKSHLAREID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G MGR D IQ RVLN +KGPAVR R QAD+ Y M++ + +NL VIQG Sbjct: 62 ALGGEMGRNIDKTFIQIRVLNTRKGPAVRSLRAQADKMAYANEMKKTLEHTDNLSVIQGM 121 Query: 124 VAGFNTE----KNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 V+ E K +I I +++ R V++ TGTFLRG+IHIG++ AGRMG+ S Sbjct: 122 VSELVVEEENGKKVIKGIKIREGLEYRAKAVIIATGTFLRGLIHIGEINFSAGRMGELSS 181 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADE-RLIPFSFMT---DKITN 235 L S K GR KTGTP R+DG+TI + E+Q D+ +++ FS T D + Sbjct: 182 EDLPVSLEKIGLKLGRFKTGTPTRIDGRTIDYSVLEEQPGDKSQVLKFSNRTKDEDALNR 241 Query: 236 RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFL 295 +QI C I TN + H II + S +++G I+ GPRYCPSIEDKI R+ ++N H +FL Sbjct: 242 KQIPCYIAHTNEKVHEIIRNAKERSPLFNGTIQGLGPRYCPSIEDKIFRYPDKNQHHLFL 301 Query: 296 EPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTL 355 E EG T+ +Y G+S++LP ++Q + ++ I G E I+R YAIEYDY+ P+E+ TL Sbjct: 302 EREGYETNEIYLGGLSSSLPVDVQEEMLKNIKGFENAKIMRYAYAIEYDYVPPEEIKYTL 361 Query: 356 ETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDL 415 E++ + LFLAGQINGT+GYEEA AQGL+AGIN+ RK + + R DSYIG +IDDL Sbjct: 362 ESRTVENLFLAGQINGTSGYEEAGAQGLMAGINAVRKLRNEEPVILDRADSYIGTLIDDL 421 Query: 416 TSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLR 475 SKG EPYRMFT+R+EYR+ LR DNAD RLT +G +LG + E +R K ++ + Sbjct: 422 VSKGTNEPYRMFTARSEYRLYLREDNADLRLTKLGYELGLVPEEEYQRVEKKRKDVKIIT 481 Query: 476 SLLKSLVLTSKNLSSTSISFK------QDGKTRTAYEFLSYPDFSIQNLFSICP-----D 524 +L + N I K +DG T E L P+ + +++ I D Sbjct: 482 EILAKTNVGPSNPRVNEILLKRGESPIKDGS--TLLELLRRPEVTFEDIKYISEEIKEVD 539 Query: 525 ARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKL 584 + + +++I Y Y R + ++ K E + IP D DY L + E K+KL Sbjct: 540 LQGYDHDTTYQVEITVKYEGYINRALKMIEKHKSMENKKIPIDIDYDDLKTIPKEAKDKL 599 Query: 585 SILKPFNLLQASKIEGMTPAALNLLLIYIK 614 +KP N+ QAS+I G++PA + +LIY+K Sbjct: 600 KRIKPINIGQASRISGVSPADIQAILIYLK 629 >gi|325192232|emb|CCA26686.1| tRNA uridine 5carboxymethylaminomethyl modification enzyme gidA putative [Albugo laibachii Nc14] Length = 671 Score = 512 bits (1318), Expect = e-143, Method: Compositional matrix adjust. Identities = 302/631 (47%), Positives = 393/631 (62%), Gaps = 21/631 (3%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 N YDVIV+GGGHAGCEAAA A + GA TAL+T K TIG MSCNP+IGG+GKG LVREI Sbjct: 28 NPDYDVIVVGGGHAGCEAAAAAVRAGAKTALVTQKLHTIGEMSCNPSIGGVGKGTLVREI 87 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DALDGLMGR+AD AGIQ+ +LN KGPAVRGPR Q DR+LY+ MQR + S L + + Sbjct: 88 DALDGLMGRIADQAGIQYHMLNASKGPAVRGPRAQMDRDLYQKTMQRFLRSIAGLTLEEE 147 Query: 123 EVAGFNTEKNIISS--IVMQDNSMIRCSTVVLTTGTFLRGVIHIGK-LKIPAGRMG---- 175 V K+ + I+ I VV+TTGTFLRG+I++G+ ++IPAGR Sbjct: 148 AVDDLIVSKSGHRALGIITSSGRCIHSRAVVITTGTFLRGMIYLGRDIRIPAGRHRRDCR 207 Query: 176 --DSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK- 232 + PS L + F+F GRLKTGTP RLDG TI + E Q++D FS++ D Sbjct: 208 EVEPPSVGLAKTLQDFEFPIGRLKTGTPPRLDGNTIDTNGLEVQYSDPVPQLFSYLHDLE 267 Query: 233 ---ITNRQIECGITRTNLETHRIIMENIKHSAIYS-GDIKSYGPRYCPSIEDKIVRFGER 288 N+ + C +T TN TH ++ +N+ +S G+ K GPRYCPSI+ K++RF +R Sbjct: 268 PPIPQNKLVTCHVTYTNEVTHELVRDNLDSLPEFSTGNGKGVGPRYCPSIDTKVLRFPDR 327 Query: 289 NGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINP 348 N HQI+LEPEGL T +VYPNGISTA PE++Q + +RTI GLEK I+RPGY++EYDYI+P Sbjct: 328 NRHQIWLEPEGLQTSIVYPNGISTAFPEKLQLELVRTIKGLEKAEIVRPGYSVEYDYIDP 387 Query: 349 KELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYI 408 + L TLETKKI GL+LAGQINGTTGYEEAAAQG++AG+N+ SN L R D++I Sbjct: 388 RSLHATLETKKIQGLYLAGQINGTTGYEEAAAQGVIAGLNAGLTSNDLPPFTLDRADAFI 447 Query: 409 GVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLG--CIGERRQKRFAK 466 GV+IDDLTS G EPYRMFTSR+EYR+ LR DNAD RLT + + R ++ Sbjct: 448 GVLIDDLTSLGTNEPYRMFTSRSEYRLLLRQDNADLRLTRRAYEHHPTLVSTERMRQLDL 507 Query: 467 YIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICP--- 523 Q + R L+S V + + +DG R+AY+ LS+P S L I Sbjct: 508 KTQLMDEGREALQSFVQDPHEWTRFGVKVSRDGVARSAYQILSFPQVSSSTLKEIWKRVP 567 Query: 524 --DARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELK 581 + + V E L ES YAA Q E + ++ +P DYS +S+E + Sbjct: 568 LLNHESTRNKVRELLSTESLYAAQLRSQRHEIVMYRDKQHIELPNWIDYSKFSMISSEER 627 Query: 582 EKLSILKPFNLLQASKIEGMTPAALNLLLIY 612 EKL KP + AS+I G+ + L +L Y Sbjct: 628 EKLQEAKPTTIYAASRISGVRSSTLLMLYQY 658 >gi|16802001|ref|NP_472269.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria innocua Clip11262] gi|21263670|sp|Q926U8|MNMG_LISIN RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|16415483|emb|CAC98167.1| gidA [Listeria innocua Clip11262] Length = 629 Score = 512 bits (1318), Expect = e-143, Method: Compositional matrix adjust. Identities = 265/619 (42%), Positives = 379/619 (61%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+G GHAG EA + ++GA T ++T + M CNP++GG KG +VREIDA Sbjct: 8 TFDVIVVGAGHAGVEAGLASGRMGAKTLMLTINLDMVAFMPCNPSVGGPAKGVVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ M+ I +EN+ + QG V Sbjct: 68 LGGEMGRNTDKTYIQMRMLNTGKGPAVRALRAQADKWDYQHEMKHTIEKEENITLRQGLV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ ++ TVV+TTGTF RG I +G+L+ +G PS L Sbjct: 128 DRLVIEDGVCKGVITNSGAIYYAKTVVITTGTFSRGEIIVGELRYSSGPNNQQPSVKLSE 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F+ R KTGTP R+ TI + KTE+Q D+ FSF T ++ Q+ C +T Sbjct: 188 HLEELGFELRRFKTGTPPRVKSSTIDYSKTEEQPGDDHPRAFSFDTVEMMLEQLPCWLTY 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +++ K G RYCPSIEDKIVRF ++ HQIFLEPEG NT+ Sbjct: 248 TNETTHEIIQANLHRSPMFTATKKGTGARYCPSIEDKIVRFSDKPRHQIFLEPEGKNTEE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPEE+Q + +RTIPGLE V ++R GYAIEYD + P +L+P+LETK + GLF Sbjct: 308 VYVQGLSTSLPEEVQREMLRTIPGLENVEMMRVGYAIEYDAVMPDQLWPSLETKLVEGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+ARK + + + R +YIGV+IDDL +KG EPY Sbjct: 368 TAGQINGTSGYEEAAGQGLMAGINAARKVFEKEPVILGRDQAYIGVLIDDLVTKGTEEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF-----AKYIQEYNFLRSLLK 479 R+ TSRAEYR+ LR DNAD RLT IG ++G I + R +RF A ++ ++ +K Sbjct: 428 RLLTSRAEYRLLLRHDNADLRLTEIGHEIGLISDERYERFLAKQRAIEAEKERLQKTRIK 487 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 L +DG A + L P+ + + I + + E+++I+ Sbjct: 488 PTAEVQAMLKEIGSGELKDGI--LAADLLRRPEITYDKIAQIVSRETFVTDEIAEQVEIQ 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + ++ +++K E + IP++ DY ++ L+ E EKL ++P ++ QAS+I Sbjct: 546 IKYEGYIQKSNLQVEKMKRMEDKKIPENIDYDAISGLATEALEKLKKIEPLSIAQASRIS 605 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 606 GVNPADISILLVYIEQGKI 624 >gi|317485843|ref|ZP_07944707.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bilophila wadsworthia 3_1_6] gi|316922949|gb|EFV44171.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bilophila wadsworthia 3_1_6] Length = 619 Score = 512 bits (1318), Expect = e-143, Method: Compositional matrix adjust. Identities = 272/619 (43%), Positives = 369/619 (59%), Gaps = 9/619 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D IV+G GHAGCEAA A+ G LIT IG +SCNPAIGGL KGH+VREIDAL Sbjct: 2 FDCIVVGAGHAGCEAAMTLARFGQRVLLITGNVDRIGHLSCNPAIGGLAKGHMVREIDAL 61 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+MG AD AGIQFR LN KGPAVR R Q DR+ Y A + + ++ ++ + Q V Sbjct: 62 GGMMGLWADRAGIQFRTLNASKGPAVRATRAQIDRDSYMEAAKAALFAEPDITIWQDTVD 121 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + + + V+LTTGTFL G+IH+G P GR+GD+ + L +S Sbjct: 122 EVLELGGRAAGVRTELGQTFEAPHVILTTGTFLCGLIHVGLTHFPGGRLGDAAAMKLSDS 181 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 K GRLKTGT RL +I + + E+Q D+ FSF K Q+ C +T T Sbjct: 182 LRKHGLTLGRLKTGTTPRLLRSSIDFSQMEEQPGDDPAPGFSFYGPKPGQPQVPCYVTWT 241 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N TH I + S +++G I+ G RYCPS+EDK+ RF ER H +F+EPEGLN Sbjct: 242 NERTHDAIRSGMDRSPLFTGVIEGTGARYCPSVEDKVARFPERERHHVFIEPEGLNGQEC 301 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NGIST+LP ++Q I +IPGLE ++RPGYAIEYDY++P +L PTLE K + GL+L Sbjct: 302 YANGISTSLPLDVQLAMIASIPGLEHAKMVRPGYAIEYDYVDPVQLEPTLEAKVLPGLWL 361 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGT+GYEEAAAQG+ A IN + R +Y+ V++DDL ++G EPYR Sbjct: 362 AGQINGTSGYEEAAAQGMWAAINVGCRLTGRQPFLPGRDVAYMSVLVDDLVTRGTQEPYR 421 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAEYR+ LR NAD RLTP+G +LG +G+ + F + L +L+ + ++ Sbjct: 422 MFTSRAEYRLLLREANADARLTPLGRELGLVGDEQWSAFRRKQDALGRLLDMLREVRVSP 481 Query: 486 KNLSSTSISFKQDG-----KTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 ++TS +F++ G K+ T E L P +++ L + P F V+ + Sbjct: 482 D--AATSDAFRELGEPVPNKSLTLEEVLRRPSMTLERLERLHPGVAAFPEEVLLEAETSV 539 Query: 541 SYAAYTGRQ-MIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 YA Y RQ + + + EE RL P D DY S+ LS E+ EKL ++P L QA +I Sbjct: 540 KYAGYLVRQDELVKRSARLEEVRL-PADLDYPSVSGLSAEIVEKLCAVRPRTLGQAGRIS 598 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+TPAAL L I++KK ++ Sbjct: 599 GVTPAALTCLEIHLKKRSL 617 >gi|109947998|ref|YP_665226.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Helicobacter acinonychis str. Sheeba] gi|123066121|sp|Q17VU9|MNMG_HELAH RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|109715219|emb|CAK00227.1| glucose inhibited division protein A [Helicobacter acinonychis str. Sheeba] Length = 621 Score = 512 bits (1318), Expect = e-143, Method: Compositional matrix adjust. Identities = 285/627 (45%), Positives = 378/627 (60%), Gaps = 16/627 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M+ S D++V+GGGHAG EA+ +AAK+GA T LIT TIG SCNPAIGGLGKGHL + Sbjct: 1 MVKES-DILVVGGGHAGIEASLIAAKMGAKTHLITMLIDTIGLASCNPAIGGLGKGHLTK 59 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+D L G MG + D +G+Q+RVLN KGPAVRG R Q D + YR+ + +L+ NL V Sbjct: 60 EVDVLGGAMGIITDNSGLQYRVLNASKGPAVRGTRAQIDMDTYRIFARNLVLNTPNLSVS 119 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q E + + + N+ R V++TTGTFL+GV+HIG+ + GR G++ SN Sbjct: 120 QEMTESLIIENDEVVGVTTNINNTYRAKKVIITTGTFLKGVVHIGEHQNQNGRFGENASN 179 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 SL + + F RLKTGT R+ GK+I ++ E+ F D FS+ T Q+ C Sbjct: 180 SLALNLRELGFKVERLKTGTCPRVAGKSINFEGLEEHFGDTNPPYFSYKTKNFNPTQLSC 239 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN TH+II +N + ++SG I+ GPRYCPSIEDKI RF E+ HQ+FLEP+ + Sbjct: 240 FITYTNPTTHQIIRDNFHRAPLFSGQIEGIGPRYCPSIEDKINRFSEKERHQLFLEPQTI 299 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + Y NG+ST+LP ++Q + I +I GLE I R GYAIEYD+I P EL TLETKKI Sbjct: 300 HKSEYYINGLSTSLPLDVQEETIHSIKGLENALITRYGYAIEYDFIQPTELTHTLETKKI 359 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GL+LAGQINGTTGYEEAAAQGL+AGIN+ R ++YIGV+IDDL +KG Sbjct: 360 KGLYLAGQINGTTGYEEAAAQGLMAGINAVLALKNQAPFILKRNEAYIGVLIDDLVTKGT 419 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DN RL LG + + K K QE LK Sbjct: 420 NEPYRMFTSRAEYRLLLREDNTLFRLGEHAYHLGLMEKDFYKELKKDKQEIQENLKRLKE 479 Query: 481 LVLTS--------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV 532 VLT L I+ K +G + L+ FS++ + S S V Sbjct: 480 CVLTPSKEVLKRLSELDENPINDKING-----VDLLARDSFSLEKMRSFFSFLAPLSERV 534 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 +E+++IE Y Y +Q ++ K IPKDF + +P LS E EKL +P +L Sbjct: 535 LEQIKIECKYNIYIEKQHENIAKMDSMLKVSIPKDFVFKGIPGLSLEAVEKLEKFRPKSL 594 Query: 593 LQASKIEGMTPAALNLLLIYI--KKNT 617 +AS+I G+TPA L++L +YI +KN+ Sbjct: 595 FEASEISGITPANLDVLHLYIHLRKNS 621 >gi|225631114|ref|ZP_03787837.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225591191|gb|EEH12350.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 567 Score = 511 bits (1317), Expect = e-143, Method: Compositional matrix adjust. Identities = 268/564 (47%), Positives = 354/564 (62%), Gaps = 21/564 (3%) Query: 76 AGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKN--- 132 A I +LN +G AV GPR QADR+LY+ A+Q IL+ NL V + V F E N Sbjct: 1 ASIHSVILNSSRGAAVWGPRAQADRKLYKQAIQEIILNYNNLTVKEESVDDFLIESNNNG 60 Query: 133 --IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFD 190 I +++ I S VVLTTGTFLRGVIHIG+ P+GRMGD P+ L N+ K++ Sbjct: 61 ELCIKAVITSSGEHILTSKVVLTTGTFLRGVIHIGEQVTPSGRMGDKPAVELANTLKKYN 120 Query: 191 FDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTNLETH 250 F GRL+TGTP RLD TI W ++Q D +PFS++T+KI Q+ C IT TN TH Sbjct: 121 FKLGRLRTGTPPRLDRGTINWSILQEQVGDNPPVPFSYLTEKINQPQVSCFITHTNENTH 180 Query: 251 RIIMENIKHSAI-YSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNG 309 +II EN+ SA Y DI PRYCPSIE K+ +F E++ HQIFLEPEGL+ D VYPNG Sbjct: 181 KIIRENLHRSASSYLDDI--IAPRYCPSIEVKVKKFAEKSSHQIFLEPEGLDDDTVYPNG 238 Query: 310 ISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQI 369 IS +LP E+Q + I++I GLE I+RPGYA+EYDYI+P+ELF TLETKK+ GL+ AGQI Sbjct: 239 ISNSLPIEVQREMIKSIKGLENAEILRPGYAVEYDYIDPRELFHTLETKKVKGLYFAGQI 298 Query: 370 NGTTGYEEAAAQGLVAGINSARKS-NKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFT 428 NGTTGYEEAA QG++AGIN+A + K + RTDSYIGVMIDDL +KGV+EPYR+FT Sbjct: 299 NGTTGYEEAAGQGIIAGINAALSAFEKKESFVLHRTDSYIGVMIDDLVTKGVIEPYRLFT 358 Query: 429 SRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNL 488 SRAEYR+++R DNAD RLT G + + R ++ L L SL +T + L Sbjct: 359 SRAEYRLAIRSDNADRRLTQKGYDISLVSHERYSVLQNKLESIKQLEEKLGSLTITPEQL 418 Query: 489 SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL------------VIERL 536 S I DG +TA + LSYP+ L I P+ + + E + Sbjct: 419 RSYGIKISYDGIRKTALDLLSYPNIDWNKLQEIWPELSSITRWDGTAMGSITKNEICEAV 478 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +IE+ Y Y RQ + K ++ E IP DF+YS + LS+E+ EKL +KP + A Sbjct: 479 EIEAKYKPYLIRQEADMKFLREEINTQIPIDFNYSQVKGLSSEVIEKLQTIKPATIGIAK 538 Query: 597 KIEGMTPAALNLLLIYIKKNTVKL 620 +I+G+TPAA+ +L+Y++ K+ Sbjct: 539 QIQGITPAAIVGILVYLRNRKTKV 562 >gi|298695967|gb|ADI99189.1| glucose inhibited division protein A [Staphylococcus aureus subsp. aureus ED133] Length = 594 Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust. Identities = 269/592 (45%), Positives = 376/592 (63%), Gaps = 7/592 (1%) Query: 33 LITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVR 92 ++T I M CNP++GG KG +VREIDAL G M + D IQ R+LN KGPAVR Sbjct: 1 MLTINLDNIAFMPCNPSVGGPAKGIVVREIDALGGQMAKTIDKTHIQMRMLNTGKGPAVR 60 Query: 93 GPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVL 152 R QAD+ LY+ M+R I +ENL ++QG V E N + + + V++ Sbjct: 61 ALRAQADKVLYQQEMKRVIEDEENLHIMQGMVDELIIEDNEVKGVRTNIGTEYLSKAVII 120 Query: 153 TTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWD 212 TTGTFLRG I +G +K +G PS +L ++ + FD R KTGTP R++ KTI + Sbjct: 121 TTGTFLRGEIILGNMKYSSGPNHQLPSITLSDNLRELGFDVVRFKTGTPPRVNSKTIDYS 180 Query: 213 KTEKQFADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGP 272 KTE Q D+ FSF T + Q+ C +T TN ETH++I +N+ SA+YSG IK GP Sbjct: 181 KTEIQPGDDVGRAFSFETTEYILDQLPCWLTYTNAETHKVIDDNLHLSAMYSGMIKGTGP 240 Query: 273 RYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKV 332 RYCPSIEDK VRF ++ HQ+FLEPEG NT+ VY G+ST+LPE +Q Q + TIPGLEK Sbjct: 241 RYCPSIEDKFVRFNDKPRHQLFLEPEGRNTNEVYVQGLSTSLPEHVQRQMLETIPGLEKA 300 Query: 333 NIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARK 392 +++R GYAIEYD I P +L+PTLETK I L+ AGQINGT+GYEEAA QGL+AGIN+A K Sbjct: 301 DMMRAGYAIEYDAIVPTQLWPTLETKMIKNLYTAGQINGTSGYEEAAGQGLMAGINAAGK 360 Query: 393 SNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMK 452 SR+D+YIGV+IDDL +KG EPYR+ TSRAEYR+ LR DNAD RLT +G + Sbjct: 361 VLNTGEKILSRSDAYIGVLIDDLVTKGTNEPYRLLTSRAEYRLLLRHDNADLRLTDMGYE 420 Query: 453 LGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTR-----TAYEF 507 LG I E R RF + Q+ + L + + K T +Q G +R A + Sbjct: 421 LGMISEERYARFNEKRQQIDAEIKRLSDIRI--KPNEHTQAIIEQHGGSRLKDGILAIDL 478 Query: 508 LSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKD 567 L P+ + + I + + ++ V E+++I++ Y Y + + + +++K E++ IP+D Sbjct: 479 LRRPEMTYDIILEILEEEHQLNADVEEQVEIQTKYEGYINKSLQQVEKVKRMEEKKIPED 538 Query: 568 FDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 DYS + +L+ E +EKLS +KP N+ QAS+I G+ PA +++LLIY+++ ++ Sbjct: 539 LDYSKIDSLATEAREKLSEVKPLNIAQASRISGVNPADISILLIYLEQGKLQ 590 >gi|213409413|ref|XP_002175477.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Schizosaccharomyces japonicus yFS275] gi|212003524|gb|EEB09184.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Schizosaccharomyces japonicus yFS275] Length = 674 Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust. Identities = 271/627 (43%), Positives = 386/627 (61%), Gaps = 16/627 (2%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDG 67 VIVIGGGHAG EAAA +A+ G T LIT IG MSCNPA GG+GKG L+REIDALDG Sbjct: 30 VIVIGGGHAGVEAAAASARSGVKTWLITKSKRDIGKMSCNPAFGGIGKGTLLREIDALDG 89 Query: 68 LMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQEN--LDVIQGEVA 125 ++GRV D + IQFR+LN KGPAV PR Q DR+ ++ MQ + S + L +I+G+V Sbjct: 90 VVGRVCDESAIQFRLLNRSKGPAVWSPRAQMDRKAFQRNMQSTLASYDLKLLQIIEGDVV 149 Query: 126 GFNT-----EKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 N +K IS++++ D + ++VV+ TGTFL +HIG IP GR+G++PS Sbjct: 150 DINVNTTGADKPFISNVLLADGTKFDATSVVIATGTFLSAELHIGHKSIPGGRIGENPSC 209 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR---- 236 +L ++ K F RLKTGTP RL +I K ++ D++ PFS++ + + Sbjct: 210 ALSDTLRKLGFRIKRLKTGTPPRLASHSIDITKMIPEYGDDQPAPFSYLNSRDNFQPSLP 269 Query: 237 QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLE 296 Q C +T TN TH I+ +N+ H A + + PRYCPSIE KIVRF R H ++LE Sbjct: 270 QRPCYVTYTNATTHEIVRKNM-HLAPHMAAVHINSPRYCPSIETKIVRFPLRERHIVWLE 328 Query: 297 PEGLNTDVV-YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTL 355 PEG + D + YPNG+S +LPE++Q Q IR+I GL+ I++P Y + YDY++P +L +L Sbjct: 329 PEGFDEDALWYPNGLSNSLPEDVQLQLIRSISGLKDAVIVQPAYGVMYDYLDPLQLNASL 388 Query: 356 ETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDL 415 ET+ +SGLFLAGQINGTTGYEEAAAQG++AGIN+A+ + + + R + +GV++DDL Sbjct: 389 ETQLVSGLFLAGQINGTTGYEEAAAQGVLAGINAAKYTKNEELVVIPRKVAMLGVLVDDL 448 Query: 416 TSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCI--GERRQKRFAKYIQEYNF 473 +KGV EPYRMFTSR+EYR++ R DNAD RLTP+ +G + R F +++ Sbjct: 449 VTKGVTEPYRMFTSRSEYRLTTRADNADERLTPLAKNIGLLDNNPNRYTLFQSMLKQRQK 508 Query: 474 LRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVI 533 + K LT+ + QDGK RT +E L P F L + P ++ S + Sbjct: 509 VIEAAKEFSLTAHEWKQLGYTVNQDGKHRTLWELLRNPTFDRMRLLKLIPSTKELSQTQL 568 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKF-EEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 R+ +E+ Y Y +Q E + + F EE +IP D DY+++ +S E L +KP +L Sbjct: 569 NRILVEALYTTYIEQQESENRFLNFREEATIIPNDVDYTAIGGISTEEINLLQCIKPSSL 628 Query: 593 LQASKIEGMTPAALNLLLIYIKKNTVK 619 Q +I G+ P + LL ++++N K Sbjct: 629 AQLKQISGIKPGTIIRLLRHVRRNASK 655 >gi|262039034|ref|ZP_06012368.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Leptotrichia goodfellowii F0264] gi|261746944|gb|EEY34449.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Leptotrichia goodfellowii F0264] Length = 628 Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust. Identities = 267/625 (42%), Positives = 395/625 (63%), Gaps = 16/625 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R YDVIVIG GHAG EA+ +A+LG TA+ T IG MSCNP++GG K HLV+E+D Sbjct: 2 REYDVIVIGAGHAGIEASLASARLGMKTAVFTITLDNIGVMSCNPSVGGPAKSHLVKEVD 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G MGR D + +Q R+LN KKGPAVR R Q+DR++Y M++ + +QENLD+IQ Sbjct: 62 ALGGEMGRNMDKSFVQMRILNTKKGPAVRSLRAQSDRKIYAKEMKKTLENQENLDIIQDI 121 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V F E I I + + V+ TGTFLRG+++IG+ +I GRMG+ S L Sbjct: 122 VTEFTVENGEIKGIKTKTGLEFKAKAVITATGTFLRGLMYIGEKRIKGGRMGELSSEELT 181 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-----DKITNRQI 238 +S F R KTGTP R+D +T+ K E+Q E+ +P F + + Q+ Sbjct: 182 DSLKSLGFKMDRFKTGTPPRIDIRTLDVSKLEEQ-PGEKGVPLKFSMRTPDEEVLEKPQL 240 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C +TRTNL+ H+II++N+ + +Y+G I S GPRYCPSIEDK+V+F E++ H +FLEPE Sbjct: 241 SCYLTRTNLKAHKIILDNLDKAPMYNGSISSTGPRYCPSIEDKVVKFHEKDSHHLFLEPE 300 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 G +T VY +G+ST+ P E Q + + TI GLE +I+R GYA+EYD ++P EL TLETK Sbjct: 301 GFDTAEVYISGLSTSYPAEYQQKIVNTIEGLENAHIMRYGYAVEYDIVDPGELDYTLETK 360 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 ++ GL+LAGQINGT+GYEEAAAQG++AGIN+A K + R SYIG MIDDL +K Sbjct: 361 RVKGLYLAGQINGTSGYEEAAAQGIIAGINAALKIKGEEPFILDRESSYIGTMIDDLINK 420 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 ++EPYRMFT+R+E+R+ LR DNAD RL+ K+G + ++ + + + + L Sbjct: 421 ELIEPYRMFTARSEFRLILREDNADIRLSEKAYKIGLLDKKYYDKIEEKKKNVSETIEKL 480 Query: 479 KSLVLTSKNLSSTSI--SFKQDGKTRTAY-EFLSYPDFSIQNLFSICPDARKFSSLVIE- 534 +++ L + N I + + K+ T E L P + Q++ I S+L + Sbjct: 481 ENIKLGTSNGRLVEILDKYYESLKSGTTLKEILRRPKVTYQDIKYIAEIIENVSNLSFDE 540 Query: 535 ----RLQIESSYAAYTGR-QMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 +++++ Y Y + + I ++ K ++K+ IPK+FDY + ++ E K++L +P Sbjct: 541 ETEYQIEVQVKYEGYIAKAKQIMDRQKKLDDKK-IPKNFDYGVMKGITREAKQRLEEKRP 599 Query: 590 FNLLQASKIEGMTPAALNLLLIYIK 614 +N+ QAS+I G+TPA +++LL+Y++ Sbjct: 600 YNVGQASRISGVTPADISVLLMYLE 624 >gi|325663375|ref|ZP_08151825.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Lachnospiraceae bacterium 4_1_37FAA] gi|331086947|ref|ZP_08336023.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Lachnospiraceae bacterium 9_1_43BFAA] gi|325470829|gb|EGC74059.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Lachnospiraceae bacterium 4_1_37FAA] gi|330409608|gb|EGG89047.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Lachnospiraceae bacterium 9_1_43BFAA] Length = 640 Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust. Identities = 275/619 (44%), Positives = 385/619 (62%), Gaps = 15/619 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 Y + VIG GHAGCEAA AA+LG T + T +I M CNP IGG KGHLV+E+DAL Sbjct: 15 YGIAVIGAGHAGCEAALAAARLGVRTIMFTVSVDSIALMPCNPNIGGSSKGHLVKEVDAL 74 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+V D IQ ++LN KGPAV R QAD+ Y M++ + QENLD+ Q EV Sbjct: 75 GGEMGKVIDRTFIQSKMLNKSKGPAVHSLRAQADKARYSTEMRKVLEQQENLDIKQAEVT 134 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E ++ + ++ C VVL TGT+L+ G++ G G +N L + Sbjct: 135 EILVENGKVTGVKTFSGAVYHCDAVVLCTGTYLKSRCIYGEVSENCGPNGLKAANYLSDC 194 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 + R KTGTPAR+D +I + K E+QF DER++PFSF T +++ Q+ C +T Sbjct: 195 LKELGVQMYRFKTGTPARIDRNSIDFTKMEEQFGDERVVPFSFTTNPEEVQIDQVSCWLT 254 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II EN+ S ++SG I+ GPRYCPSIEDK+V+F +++ HQ+F+EPEGL+T+ Sbjct: 255 YTNERTHEIIRENLDRSPLFSGMIEGTGPRYCPSIEDKVVKFADKDRHQVFIEPEGLDTN 314 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G+S++LPE++Q++ R++PGLE I+R YAIEYD I+ ++L+ TLE KKISGL Sbjct: 315 EMYIGGMSSSLPEDVQYEMYRSVPGLEHAKIVRNAYAIEYDCIDARQLYATLEFKKISGL 374 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F GQ NG++GYEEAAAQGLVAGIN+ARK + I R+ YIGV+IDDL +K EP Sbjct: 375 FSGGQFNGSSGYEEAAAQGLVAGINAARKVLGKEQIIIDRSQGYIGVLIDDLVTKESHEP 434 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAK---YIQEYNFLRSLLKS 480 YRM TSRAEYR+ LR DNAD RLT IG ++G I E R K K I+E + L + Sbjct: 435 YRMMTSRAEYRLLLRQDNADQRLTEIGYQVGLIDEERYKNLKKKERQIEEQ--VERLEHT 492 Query: 481 LVLTSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIER 535 V S+ + +Q G T T E + P+ S + L +I P + S V+E+ Sbjct: 493 NVGASRPVQEV---LEQYGSTPLKNGITLAELIRRPELSYEALEAIDPGRTELSEEVVEQ 549 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 + I Y Y RQM + ++ K E + IP +Y + +L E K+KL+ +P ++ QA Sbjct: 550 INIRIKYDGYIRRQMKQVEQFKKLETKRIPDAINYDEIGSLRIEAKQKLNQYRPISIGQA 609 Query: 596 SKIEGMTPAALNLLLIYIK 614 S+I G++PA +++LL+Y++ Sbjct: 610 SRISGVSPADISVLLVYME 628 >gi|320547684|ref|ZP_08041969.1| glucose inhibited division protein A [Streptococcus equinus ATCC 9812] gi|320447759|gb|EFW88517.1| glucose inhibited division protein A [Streptococcus equinus ATCC 9812] Length = 634 Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust. Identities = 271/616 (43%), Positives = 378/616 (61%), Gaps = 6/616 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAG EA+ AA++G T L T + M CNPAIGG KG +VREIDA Sbjct: 8 NYDVIVVGAGHAGVEASLAAARMGCKTMLATINLEMLSFMPCNPAIGGSAKGIVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ ++LN KGPAVR R QAD+ LY M+ + QENL + Q + Sbjct: 68 LGGEMGKNIDKTYIQMKMLNTGKGPAVRALRAQADKALYSRTMKHTVEQQENLTLRQSMI 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + N VV+TTGT LRG I +G+LK +G S L + Sbjct: 128 EEVLVEDGKVVGVRTATNQKFSAKAVVITTGTALRGEIILGELKYSSGPNNSLASIGLAD 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGI 242 + + + GR KTGTP R+ +I +D+TE Q DE+ FSFM+ + QI C + Sbjct: 188 NLKELGLEIGRFKTGTPPRVKASSINYDETEIQPGDEKPNHFSFMSNDEDYLKDQIPCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +H II +N+ + ++SG +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG T Sbjct: 248 TYTNQTSHDIINKNLYRAPMFSGIVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRET 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q + + +I GLE ++R GYAIEYD + P +L TLETKKISG Sbjct: 308 EEVYIQGLSTSLPEDVQKELVHSIKGLENAEMMRTGYAIEYDIVLPHQLRATLETKKISG 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQ NGT+GYEEAA QG+VAGIN+A K + R+D+YIGVMIDDL +KG LE Sbjct: 368 LFTAGQTNGTSGYEEAAGQGIVAGINAALKVQGKPEMILKRSDAYIGVMIDDLVTKGTLE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYR+ TSRAEYR+ LR DNAD RLT IG ++G + E R RF K ++++ + L SL Sbjct: 428 PYRLLTSRAEYRLILRHDNADMRLTEIGHRVGLVDEERYARFLKRKRQFDNELTRLSSLK 487 Query: 483 L---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQI 538 + N ++ FK TA EF+ P+ + + S + P K S VIE L+ Sbjct: 488 IKPVKETNARIEALGFKPLTDALTAKEFMRRPEINYEIATSFVGPAEEKLDSKVIELLET 547 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E Y Y + + + ++K E++ IP + D+ + +++ E ++K + P + QAS+I Sbjct: 548 EIKYEGYINKALDQVAKMKRMEEKRIPANIDWDDIDSIATEARQKFKKINPETIGQASRI 607 Query: 599 EGMTPAALNLLLIYIK 614 G+ PA +++L++Y++ Sbjct: 608 SGVNPADISILMVYLE 623 >gi|313157561|gb|EFR56979.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Alistipes sp. HGB5] Length = 627 Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust. Identities = 277/622 (44%), Positives = 388/622 (62%), Gaps = 19/622 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IVIGGGHAGCEAA+ AA+LG+ T L+T + + SMSCNPA+GG+ KG +VREIDAL Sbjct: 5 YDIIVIGGGHAGCEAASAAARLGSRTLLLTMDMTKMASMSCNPAVGGVAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MGR+ D IQFR+LN KG A+ PR Q D+ + + + + NL + Q Sbjct: 65 GGQMGRITDLTTIQFRMLNRSKGAAMWSPRAQCDKSRFSAQWRHTLENTVNLYIWQDAAT 124 Query: 126 G--FNTE--KNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 F+T K I + Q C VVLT+GTFL G++H G GR GD+ S+ Sbjct: 125 ELLFDTAGVKPRIKGVRTQMGIEFACRAVVLTSGTFLGGMMHCGTSHAEGGRAGDAASHG 184 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIEC 240 + S F+TGR+KTGTPARLD +TI ++ E Q+ DE FSF D + Q+ C Sbjct: 185 ITESLRAIGFETGRMKTGTPARLDARTIDFESLEPQYGDENPDKFSFSPDTQPVKHQLPC 244 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 + T+ E H ++ S +++G IK GPRYCPSIEDK+ F +++ HQ+FLEPEG Sbjct: 245 FLVYTSAEVHDLLRTGFDRSPLFNGTIKGIGPRYCPSIEDKLRTFADKDQHQLFLEPEGE 304 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 +T+ Y NG S++LP +IQ + + I G E ++I RPGYAIEYDY P +L +LETK + Sbjct: 305 STNEYYLNGFSSSLPWDIQWEALHKIRGFEDLHIFRPGYAIEYDYFPPTQLHHSLETKLV 364 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 SGL+ AGQ+NGTTGYEEAAAQGL+AGIN+ R + + R ++YIGV+IDDL +KGV Sbjct: 365 SGLYFAGQVNGTTGYEEAAAQGLIAGINAHRALKGEEAVVLQRDEAYIGVLIDDLVTKGV 424 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL-- 478 EPYRMFTSRAEYRI LR DNAD RLTPIG K+G I QKR+A + ++ + SL+ Sbjct: 425 DEPYRMFTSRAEYRILLRQDNADLRLTPIGYKIGLIS---QKRYAHFTEKKASVESLISF 481 Query: 479 ---KSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF------S 529 +S+ N S++ + + R Y+ L + + ++L RKF S Sbjct: 482 ARRQSIKAAEINDYLESVNSEPLTQGRKLYDILMRNNVTFESLSEALLKLRKFISDNNIS 541 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 + IE +I+ Y Y R+ A+++ E IP+DFD+ S+ +L+ E ++KL+ ++P Sbjct: 542 AEAIEEAEIQIKYKGYIEREKFIAEKLHRLENIRIPEDFDFHSMNSLTIEARQKLTRIRP 601 Query: 590 FNLLQASKIEGMTPAALNLLLI 611 + QAS+I G++PA +N+LL+ Sbjct: 602 ATIGQASRIPGVSPADVNVLLV 623 >gi|297618521|ref|YP_003703680.1| glucose inhibited division protein A [Syntrophothermus lipocalidus DSM 12680] gi|297146358|gb|ADI03115.1| glucose inhibited division protein A [Syntrophothermus lipocalidus DSM 12680] Length = 643 Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust. Identities = 270/616 (43%), Positives = 389/616 (63%), Gaps = 4/616 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEAA AA++G T L+T I M CNP++GG KG LVREIDA Sbjct: 7 SYDVIVIGAGHAGCEAALAAARMGCKTLLVTISIDGIALMPCNPSVGGPAKGQLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D A +Q R+LN KGPAVR R QAD++ Y+ M + +L++ NLD++Q EV Sbjct: 67 LGGEMGKNIDKARLQIRMLNTAKGPAVRALRAQADKKRYQKEMTKTLLAESNLDILQAEV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + IV + + + +V+TTGT+L+G I +G + G P+ L Sbjct: 127 VKILAGAGRVEGIVTRTGAKYQTKALVVTTGTYLKGRIIVGDVTYDGGPNPFPPATKLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S + GR KTGTP R+ K+I + KTE+Q D ++ FS+M+ ++ Q+ C +T Sbjct: 187 SLRELGLVLGRFKTGTPPRVSRKSIDFSKTEEQPGDPGVLNFSYMSPRVEKPQVSCWLTH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 + ETHRI+ EN+ S +++G I+ GPRYCPS EDK+VRF + HQIF+EPEGL+TD Sbjct: 247 STPETHRIVKENLHRSPLFTGVIQGVGPRYCPSFEDKVVRFAHKEQHQIFIEPEGLDTDE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G++T+LPE++Q + +IPGLE+ I+R GYAIEYDY+ P +L TLET+ + GLF Sbjct: 307 MYIQGLNTSLPEDVQLAVLHSIPGLERARIVRTGYAIEYDYVLPSQLKLTLETRVVQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAAAQG++AGIN+A + + R+++YIGV+IDDL +KG+ EPY Sbjct: 367 TAGQINGTSGYEEAAAQGIIAGINAALFVQEKEPFVLKRSEAYIGVLIDDLVTKGIEEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRS-LLKSLVL 483 R+ TSRAEYR+ LR DNAD RLT G +G + + R RF ++ LR LL++ V Sbjct: 427 RLMTSRAEYRLLLRQDNADIRLTEKGRDIGLVDDERYTRFRSKVRRMEELREMLLRNKVG 486 Query: 484 TSKNLSSTSISFKQDGKTRTA---YEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 S + + + + R A +E L P+ SI++L S+ +F V E ++IE Sbjct: 487 VSHEGVAKLLRERGTSELREAVSLWELLRRPEVSIEDLVSLAMVGEEFEPEVREEVEIEC 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y +Q+ + + E + IP D DY + LSNE + KL +P ++ QAS++ G Sbjct: 547 KYEGYIRKQVEMVERFERMENKRIPPDIDYDDVVGLSNEGRLKLKTARPESMGQASRMSG 606 Query: 601 MTPAALNLLLIYIKKN 616 ++PA + +LLI++++ Sbjct: 607 ISPADITVLLIHLERE 622 >gi|78214049|ref|YP_382828.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Synechococcus sp. CC9605] gi|123577362|sp|Q3AGK9|MNMG_SYNSC RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|78198508|gb|ABB36273.1| glucose inhibited division protein A [Synechococcus sp. CC9605] Length = 643 Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust. Identities = 271/618 (43%), Positives = 381/618 (61%), Gaps = 8/618 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 S+DVIV+GGGHAGCEAA AA+LG +TAL + I CNPA+GG K LV E+DA Sbjct: 10 SFDVIVVGGGHAGCEAAITAARLGLNTALFSLNLDRIAWQPCNPAVGGPAKSQLVHEVDA 69 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G++GR+ADA IQ R+LN +GPAV R Q D+ LY M + + NL + + V Sbjct: 70 LGGVIGRLADATAIQKRILNASRGPAVWALRAQTDKRLYSRQMLQLLQHTPNLALREAMV 129 Query: 125 AGFNT----EKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 G T ++ IS I S+ V+LT GTFL G I +G + AGR G+ + Sbjct: 130 TGLETTVAGDQQRISGIRTYFGSVYGADAVILTAGTFLGGRIWVGHQSMAAGRAGEQAAE 189 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSF-MTDKITNRQIE 239 L + + F T RLKTGTPAR+D ++I D+ E+Q +D FSF ++ Q+ Sbjct: 190 GLTETLQELGFQTDRLKTGTPARVDRRSIALDQLEEQPSDAADRFFSFDPAAWVSGEQMS 249 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C ITRT ETH++I +N+ +AIY G I S GPRYCPSIEDKIVRF +++ HQIFLEPEG Sbjct: 250 CHITRTTAETHQLIRDNLHLTAIYGGVIDSKGPRYCPSIEDKIVRFADKDSHQIFLEPEG 309 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 +T +Y G ST LPE IQ Q +R++PGLE+ ++RP Y+++YDY+ +L P+LETK+ Sbjct: 310 RDTPEIYVQGFSTGLPEPIQLQLLRSLPGLEQAVMLRPAYSVDYDYLPATQLKPSLETKR 369 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 + GLF AGQ+NGTTGYEEAAAQGLVAG+N+ R + + F R SYIG MIDDL SK Sbjct: 370 VRGLFSAGQLNGTTGYEEAAAQGLVAGVNAGRLIGGQEPVHFPREGSYIGTMIDDLVSKD 429 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 + EPYR+ TSR+EYR+ LR DNAD RLTP+G +LG I +RR + F +Q + L+ Sbjct: 430 LREPYRVLTSRSEYRLILRGDNADRRLTPLGHELGLIDDRRWQLFEDKLQAMEGEKQRLE 489 Query: 480 SLVLTSKNLSSTSISFKQDGKTR---TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 ++ L + + ++ + + T + L P +L V E Sbjct: 490 TVRLKVSDPVAPAVEQETGAAIKGSITLADLLRRPGMHAADLVRHGLADADLPLPVREGA 549 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y+ Y RQ + ++K + +R +P D +Y+ + LSNE +EKL+ ++P L QAS Sbjct: 550 EIDIKYSGYLQRQQQQIDQVKRQSQRKLPADLNYAGIGTLSNEAREKLTAIQPSTLGQAS 609 Query: 597 KIEGMTPAALNLLLIYIK 614 +I G++ A + LL++++ Sbjct: 610 RIPGVSKADITALLMWLE 627 >gi|81170581|sp|Q5LXK0|MNMG_STRT1 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|81170582|sp|Q5M250|MNMG_STRT2 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A Length = 633 Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust. Identities = 275/625 (44%), Positives = 386/625 (61%), Gaps = 16/625 (2%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 + ++DVIV+G GHAG EA+ AA++G L T + M CNP+IGG KG +VREI Sbjct: 6 DENFDVIVVGAGHAGVEASLAAARMGCKVLLATINLEMLAFMPCNPSIGGSAKGIVVREI 65 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G MG+ D IQ ++LN KGPAVR R QAD+ LY + M+ + QENL + Q Sbjct: 66 DALGGEMGKNIDKTYIQMKMLNTGKGPAVRALRAQADKALYAMTMKHTVERQENLTLRQS 125 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 V E + + + N VV+TTGT LRG I IG LK +G S +L Sbjct: 126 MVDEILVEDSKVVGVRTATNQKYGAKAVVVTTGTALRGEIIIGDLKYSSGPNNSLASVTL 185 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIEC 240 ++ + + GR KTGTP R+ +I +++TE Q DE+ FSF++ + QI C Sbjct: 186 ADNLKELGLEIGRFKTGTPPRVKASSINYEETEIQPGDEKPNHFSFLSKDEDYLQDQIPC 245 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +T TN E+H II N+ + ++SG +K GPRYCPSIEDKIVRF ++N HQ+FLEPEG Sbjct: 246 WLTYTNQESHDIINNNLHRAPMFSGIVKGVGPRYCPSIEDKIVRFADKNRHQLFLEPEGR 305 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T+ VY G+ST+LPE++Q + I +I GLEK +IR GYAIEYD + P +L TLETK I Sbjct: 306 ETEEVYVQGLSTSLPEDVQKELIHSIKGLEKAEMIRTGYAIEYDIVLPHQLRATLETKLI 365 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 SGLF AGQ NGT+GYEEAA QGLVAGIN+A K + R+D+YIGVMIDDL +KG Sbjct: 366 SGLFTAGQTNGTSGYEEAAGQGLVAGINAALKVQGKPELILKRSDAYIGVMIDDLVTKGT 425 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL--- 477 LEPYR+ TSRAEYR+ LR DNAD RLTPIG ++G + + R F I++ F R L Sbjct: 426 LEPYRLLTSRAEYRLILRHDNADMRLTPIGREVGLVDDERWNIFK--IKKNQFDRELTRL 483 Query: 478 ----LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYP--DFSIQNLFSICPDARKFSSL 531 LK + T++ + ++ FK TA EF+ P D++ F + P A + Sbjct: 484 SKEKLKPIKETNEKIQ--ALGFKPLTDAMTAKEFMRRPEIDYATATQF-VGPAAEDLDAK 540 Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 VIE L+ E Y Y + + + ++K E++ IP++ D+ ++ +++ E ++K + P Sbjct: 541 VIELLETEIKYEGYINKALDQVAKMKRMEEKKIPENIDWDAIDSIATEARQKFKKINPET 600 Query: 592 LLQASKIEGMTPAALNLLLIYIKKN 616 + QAS+I G+ PA +++L++Y++ N Sbjct: 601 IGQASRISGVNPADISILMVYLEGN 625 >gi|116628660|ref|YP_821279.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus thermophilus LMD-9] gi|122266746|sp|Q03I89|MNMG_STRTD RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|116101937|gb|ABJ67083.1| tRNA uridine 5-carboxymethylaminomethyl modification FAD-utilizing enzyme [Streptococcus thermophilus LMD-9] Length = 633 Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust. Identities = 275/625 (44%), Positives = 386/625 (61%), Gaps = 16/625 (2%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 + ++DVIV+G GHAG EA+ AA++G L T + M CNP+IGG KG +VREI Sbjct: 6 DENFDVIVVGAGHAGVEASLAAARMGCKVLLATINLEMLAFMPCNPSIGGSAKGIVVREI 65 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G MG+ D IQ ++LN KGPAVR R QAD+ LY + M+ + QENL + Q Sbjct: 66 DALGGEMGKNIDKTYIQMKMLNTGKGPAVRALRAQADKALYAMTMKHTVECQENLTLRQS 125 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 V E + + + N VV+TTGT LRG I IG LK +G S +L Sbjct: 126 MVDEILVEDSKVVGVRTATNQKYGAKAVVVTTGTALRGEIIIGDLKYSSGPNNSLASVTL 185 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIEC 240 ++ + + GR KTGTP R+ +I +++TE Q DE+ FSF++ + QI C Sbjct: 186 ADNLKELGLEIGRFKTGTPPRVKASSINYEETEIQPGDEKPNHFSFLSKDEDYLQDQIPC 245 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +T TN E+H II N+ + ++SG +K GPRYCPSIEDKIVRF ++N HQ+FLEPEG Sbjct: 246 WLTYTNQESHDIINNNLHRAPMFSGIVKGVGPRYCPSIEDKIVRFADKNRHQLFLEPEGR 305 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T+ VY G+ST+LPE++Q + I +I GLEK +IR GYAIEYD + P +L TLETK I Sbjct: 306 ETEEVYVQGLSTSLPEDVQKELIHSIKGLEKAEMIRTGYAIEYDIVLPHQLRATLETKLI 365 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 SGLF AGQ NGT+GYEEAA QGLVAGIN+A K + R+D+YIGVMIDDL +KG Sbjct: 366 SGLFTAGQTNGTSGYEEAAGQGLVAGINAALKVQGKPELILKRSDAYIGVMIDDLVTKGT 425 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL--- 477 LEPYR+ TSRAEYR+ LR DNAD RLTPIG ++G + + R F I++ F R L Sbjct: 426 LEPYRLLTSRAEYRLILRHDNADMRLTPIGREVGLVDDERWNIFK--IKKNQFDRELTRL 483 Query: 478 ----LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYP--DFSIQNLFSICPDARKFSSL 531 LK + T++ + ++ FK TA EF+ P D++ F + P A + Sbjct: 484 SKEKLKPIKETNEKIQ--ALGFKPLTDAMTAKEFMRRPEIDYATATQF-VGPAAEDLDAK 540 Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 VIE L+ E Y Y + + + ++K E++ IP++ D+ ++ +++ E ++K + P Sbjct: 541 VIELLETEIKYEGYINKALDQVAKMKRMEEKKIPENIDWDAIDSIATEARQKFKKINPET 600 Query: 592 LLQASKIEGMTPAALNLLLIYIKKN 616 + QAS+I G+ PA +++L++Y++ N Sbjct: 601 IGQASRISGVNPADISILMVYLEGN 625 >gi|47095617|ref|ZP_00233225.1| glucose-inhibited division protein A [Listeria monocytogenes str. 1/2a F6854] gi|254830754|ref|ZP_05235409.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes 10403S] gi|254899732|ref|ZP_05259656.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes J0161] gi|254913065|ref|ZP_05263077.1| glucose-inhibited division protein A [Listeria monocytogenes J2818] gi|254937446|ref|ZP_05269143.1| glucose-inhibited division protein A [Listeria monocytogenes F6900] gi|47016047|gb|EAL06972.1| glucose-inhibited division protein A [Listeria monocytogenes str. 1/2a F6854] gi|258610048|gb|EEW22656.1| glucose-inhibited division protein A [Listeria monocytogenes F6900] gi|293591066|gb|EFF99400.1| glucose-inhibited division protein A [Listeria monocytogenes J2818] Length = 629 Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust. Identities = 265/619 (42%), Positives = 379/619 (61%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+G GHAG EA + ++GA T ++T + M CNP++GG KG +VREIDA Sbjct: 8 TFDVIVVGAGHAGVEAGLASGRMGAKTLMLTINLDMVAFMPCNPSVGGPAKGVVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ M+ I +EN+ + QG V Sbjct: 68 LGGEMGRNTDKTYIQMRMLNTGKGPAVRALRAQADKWDYQHEMKHTIEKEENITLRQGLV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ ++ TVV+TTGTF RG I +G+L+ +G PS L Sbjct: 128 DRLVIEDGVCKGVITNSGAIYYAETVVITTGTFSRGEIIVGELRYSSGPNNQQPSVKLSE 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F+ R KTGTP R+ TI + KTE+Q D+ FSF T ++ Q+ C +T Sbjct: 188 HLEELGFELRRFKTGTPPRVKSSTIDYSKTEEQPGDDHPRAFSFDTVEMLLDQLPCWLTY 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +++ K G RYCPSIEDKIVRF ++ HQIFLEPEG NT+ Sbjct: 248 TNETTHEIIQANLHRSPMFTATKKGTGARYCPSIEDKIVRFSDKPRHQIFLEPEGKNTEE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPEE+Q + +RTIPGLE V ++R GYAIEYD + P +L+P+LETK + GLF Sbjct: 308 VYVQGLSTSLPEEVQREMLRTIPGLENVEMMRVGYAIEYDAVMPDQLWPSLETKLVEGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+ARK + + + R +YIGV+IDDL +KG EPY Sbjct: 368 TAGQINGTSGYEEAAGQGLMAGINAARKVFEKEPVILGRDQAYIGVLIDDLVTKGTEEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF-----AKYIQEYNFLRSLLK 479 R+ TSRAEYR+ LR DNAD RLT IG ++G I + R +RF A ++ ++ +K Sbjct: 428 RLLTSRAEYRLLLRHDNADLRLTEIGHEIGLISDERYERFLAKQSAIEAEKERLQKTRIK 487 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 L +DG A + L P+ + + I + + E+++I+ Sbjct: 488 PTAEVQAMLKEIGSGELKDGI--LAADLLRRPEITYDKIAQIVSRETFVTDEIAEQVEIQ 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + ++ +++K E + IP++ DY ++ L+ E EKL ++P ++ QAS+I Sbjct: 546 IKYEGYIQKSNLQVEKMKRMEDKKIPENIDYDAISGLATEALEKLKKIEPLSIAQASRIS 605 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 606 GVNPADISILLVYIEQGKI 624 >gi|145250253|ref|XP_001396640.1| translation optimization protein 1 [Aspergillus niger CBS 513.88] gi|134082157|emb|CAK42270.1| unnamed protein product [Aspergillus niger] Length = 698 Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust. Identities = 275/636 (43%), Positives = 392/636 (61%), Gaps = 23/636 (3%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 R+YDV+VIGGGHAG EA A AA+ GA TALIT S IG SCNP+ GG+GKG ++RE+ Sbjct: 38 TRAYDVVVIGGGHAGSEACAAAARSGARTALITPSLSNIGVCSCNPSFGGIGKGTMIREV 97 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DA+DG+ GR+ D AGI FR LN KGPAV GPR Q DR+LY+ MQ E+ E L +++G Sbjct: 98 DAMDGVAGRIIDKAGIMFRTLNRSKGPAVWGPRAQIDRDLYKKYMQEELQGTEGLSIVEG 157 Query: 123 EVAGFNTEKN----------IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAG 172 +VA K+ I + ++ +I VV+TTGTFL G IHIG P+G Sbjct: 158 KVADIVVSKDGVEHTPGAQGKIVGVRLESGEVIPTGKVVITTGTFLGGEIHIGLEAYPSG 217 Query: 173 RMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK 232 RMG++ + L S F GRLKTGTP RLD KTI + E Q D PFS++ + Sbjct: 218 RMGEAATFGLSKSLRDAGFTLGRLKTGTPPRLDRKTINFAPLEVQEGDHPPSPFSYLNGR 277 Query: 233 IT---NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERN 289 + Q+ C +T TN + H I+ N+ + ++ GPRYCPS+E KI+RF ++ Sbjct: 278 VQVDDEAQLTCWMTYTNDDVHDIVRANLDKTIHIRETVR--GPRYCPSLESKIIRFTDKK 335 Query: 290 GHQIFLEPEGLN-TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINP 348 H I+LEPEG DV+YPNGIS +P + Q+ +R + GLE V +++PGY +EYDYI+P Sbjct: 336 RHLIWLEPEGFAPNDVIYPNGISMTIPADAQYAMLRKVHGLENVTMLQPGYGVEYDYIDP 395 Query: 349 KELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYI 408 + L PTLETK ISGL+LAGQINGTTGYEEAA QG++AG N+ + + + R+D++I Sbjct: 396 RNLRPTLETKLISGLYLAGQINGTTGYEEAAGQGIIAGTNAGLSAQGREPLTLRRSDAFI 455 Query: 409 GVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYI 468 G+MIDDLT+KGV EPYRMFT+R+EYRI+ R DNAD RLT + + G + ++R + F + Sbjct: 456 GIMIDDLTTKGVSEPYRMFTTRSEYRITTRSDNADLRLTRMAREAGIVSDKRWRHFTETE 515 Query: 469 QEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLF-------SI 521 + N L++LL++ ++S + + D R+A + L + I +L Sbjct: 516 AQINELQTLLENTKMSSYAWARKGFKARIDPSQRSALDLLCLRESDIDSLIPHIESPTGT 575 Query: 522 CPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELK 581 A F + R+ IE YA + RQ AK+ +E IP D DY+++ +S E K Sbjct: 576 VYSASSFPPEIRNRVSIEGRYAPFVIRQENAAKKSLRDENLSIPADLDYATVQGISIEEK 635 Query: 582 EKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNT 617 + L ++P ++ A +IEG+TP+ + +L+++ + + Sbjct: 636 QALERVRPVSIGMARRIEGVTPSGVLRVLMHVHRTS 671 >gi|227485740|ref|ZP_03916056.1| glucose-inhibited division protein A [Anaerococcus lactolyticus ATCC 51172] gi|227236295|gb|EEI86310.1| glucose-inhibited division protein A [Anaerococcus lactolyticus ATCC 51172] Length = 643 Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust. Identities = 271/618 (43%), Positives = 384/618 (62%), Gaps = 12/618 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDV+V+G GHAGCEA AA+LG T ++T +I M CNP IGG GKGH+VREIDA Sbjct: 24 SYDVVVVGAGHAGCEAGLAAARLGMKTLVLTTSMESIADMPCNPNIGGTGKGHIVREIDA 83 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D IQ R+LN KGPAV R QAD+ Y M++ + ++NLD+ + EV Sbjct: 84 LGGEMAINIDKTFIQSRMLNTSKGPAVHSLRVQADKRKYHDEMKKVL--EDNLDLFEQEV 141 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 N + I S ++ +++ TGT+L G I IG + +G G S + L + Sbjct: 142 DKINYQDGKIVSCETVQGAIYETKAIIICTGTYLNGKILIGDYEKVSGPHGLSAATYLTD 201 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT---DKITNRQIECG 241 S + F R KTGTPAR+ +I ++KT Q D+ +IPFSF+ D RQ +C Sbjct: 202 SLREMGFSIRRFKTGTPARVHRDSINYEKTTVQEGDKEVIPFSFLNEGKDYTDRRQEDCF 261 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T T ET +IIM+N+ S IY G IK GPRYCPSIEDK+VRF +R+ HQ+F+EPEGL+ Sbjct: 262 LTYTTEETKQIIMDNLDRSPIYGGKIKGIGPRYCPSIEDKMVRFPDRDIHQVFIEPEGLS 321 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T +Y G+S++LP+E+Q +F +TI GLE V I+RP YAIEYD I+ +EL TLE+K S Sbjct: 322 TKEMYVQGVSSSLPQEVQMEFYKTIIGLEDVKIMRPAYAIEYDMIDTRELKRTLESKAYS 381 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GL+ AGQING++GYEEAA QGL+AGIN+A K + R+D+YIGV+IDDL ++G Sbjct: 382 GLYFAGQINGSSGYEEAAGQGLIAGINAALKIKGEEEFILDRSDAYIGVLIDDLVTEGTN 441 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRM TSR EYR+++R DNAD RL+ G +G + + R ++ ++ LK++ Sbjct: 442 EPYRMMTSRCEYRLTMRQDNADERLSKKGRDIGLVTDERYQKMLDKREKITSEIERLKNI 501 Query: 482 VLTSKNLSSTSISFKQDGKT-----RTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 +LT K+ T+ + ++ G T T YE + P+ + QN P+ S + + Sbjct: 502 MLTPKD--ETNKALEELGSTPLNNGLTLYELIKRPEITYQNSVIFDPERSDLPSYISLSV 559 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 Q E Y Y +Q+ + ++ K E + + D DY+ +P L E EKL+ +KP ++ QAS Sbjct: 560 QTEIKYEGYIKKQLKDIEKFKKLESKKLSHDIDYAKIPGLKKESAEKLNEIKPDSIGQAS 619 Query: 597 KIEGMTPAALNLLLIYIK 614 +I G++PA +N+LLI +K Sbjct: 620 RISGVSPADINVLLIRLK 637 >gi|116874161|ref|YP_850942.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria welshimeri serovar 6b str. SLCC5334] gi|123464237|sp|A0AMD1|MNMG_LISW6 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|116743039|emb|CAK22163.1| glucose-inhibited division protein A [Listeria welshimeri serovar 6b str. SLCC5334] Length = 629 Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust. Identities = 266/619 (42%), Positives = 377/619 (60%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+G GHAG EA + ++GA T ++T + M CNP++GG KG +VREIDA Sbjct: 8 TFDVIVVGAGHAGVEAGLASGRMGAKTLMLTINLDMVAFMPCNPSVGGPAKGVVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ M+ I +EN+ + QG V Sbjct: 68 LGGEMGRNTDKTYIQMRMLNTGKGPAVRALRAQADKWDYQHEMKHTIEKEENITLRQGLV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ ++ TVV+TTGTF RG I +G+L+ +G PS L Sbjct: 128 DHLVIEDGVCKGVITNSGAIYYAKTVVITTGTFSRGEIIVGELRYSSGPNNQQPSVKLSE 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F+ R KTGTP R+ TI + KTE+Q D+ FSF T + Q+ C +T Sbjct: 188 HLEELGFELRRFKTGTPPRVKSSTIDYSKTEEQPGDDHPRAFSFDTVDMMLDQLPCWLTY 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +++ K G RYCPSIEDKIVRF ++ HQIFLEPEG NT+ Sbjct: 248 TNETTHEIIQANLHRSPMFTATKKGTGARYCPSIEDKIVRFSDKPRHQIFLEPEGKNTEE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPEE+Q + +RTIPGLE V ++R GYAIEYD + P +L+P+LETK + GLF Sbjct: 308 VYVQGLSTSLPEEVQREMLRTIPGLENVEMMRVGYAIEYDAVMPDQLWPSLETKLVEGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+ARK + I R +YIGV+IDDL +KG EPY Sbjct: 368 TAGQINGTSGYEEAAGQGLMAGINAARKVFDKEPIILGRDQAYIGVLIDDLVTKGTEEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF-----AKYIQEYNFLRSLLK 479 R+ TSRAEYR+ LR DNAD RLT IG ++G I + R +RF A ++ ++ +K Sbjct: 428 RLLTSRAEYRLLLRHDNADLRLTEIGHEIGLISDERYERFLAKQSAIEAEKERLQKTRIK 487 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 L +DG A + L P+ + + I + + E+++I+ Sbjct: 488 PTAEVQAMLKEIGSGELKDGI--LAADLLRRPEITYDKIAQIVSRETFITDEIAEQVEIQ 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + ++ +++K E + IP++ DY ++ L+ E EKL ++P ++ QAS+I Sbjct: 546 VKYEGYIQKSNLQVEKMKRMEDKKIPENIDYDAISGLATEALEKLKKIEPLSIAQASRIS 605 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 606 GVNPADISILLVYIEQGKI 624 >gi|297379438|gb|ADI34325.1| glucose-inhibited division protein A [Helicobacter pylori v225d] Length = 624 Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust. Identities = 282/623 (45%), Positives = 375/623 (60%), Gaps = 13/623 (2%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALD 66 D++VIGGGHAG EA+ +AAK+GA LIT TIG SCNPAIGGLGKGHL +E+D L Sbjct: 6 DILVIGGGHAGIEASLIAAKMGARVHLITMLIDTIGLASCNPAIGGLGKGHLTKEVDVLG 65 Query: 67 GLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAG 126 G MG + D +G+Q+RVLN KGPAVRG RTQ D + YR+ + +L+ NL V Q Sbjct: 66 GAMGIITDNSGLQYRVLNASKGPAVRGTRTQIDMDTYRIFARNLVLNTPNLSVSQEMTES 125 Query: 127 FNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSF 186 E + + + N+ + V++TTGTFL+GV+HIG+ + GR G++ SNSL + Sbjct: 126 LIIENDEVVGVTTNINNTYKAKKVIITTGTFLKGVVHIGEHQNQNGRFGENASNSLALNL 185 Query: 187 MKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTN 246 + F RLKTGT R+ G +I ++ E+ F D FS+ T Q+ C IT TN Sbjct: 186 RELGFKVERLKTGTCPRVAGNSIDFEGLEEHFGDTNPPYFSYKTKDFNPIQLSCFITYTN 245 Query: 247 LETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVY 306 TH+II +N + ++SG I+ GPRYCPSIEDKI RF E+ HQ+FLEP+ ++ Y Sbjct: 246 PITHQIIRDNFHRAPLFSGQIEGIGPRYCPSIEDKINRFSEKERHQLFLEPQTIHKSEYY 305 Query: 307 PNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLA 366 NG+ST+LP ++Q + I +I GLE I R GYAIEYD+I P EL TLETKKI GL+LA Sbjct: 306 INGLSTSLPLDVQEKVIHSIKGLENALITRYGYAIEYDFIQPTELTHTLETKKIKGLYLA 365 Query: 367 GQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRM 426 GQINGTTGYEEAAAQGL+AGIN+ D R ++YIGV+IDDL +KG EPYRM Sbjct: 366 GQINGTTGYEEAAAQGLMAGINAVLALKNQDPFILKRNEAYIGVLIDDLVTKGTNEPYRM 425 Query: 427 FTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS- 485 FTSRAEYR+ LR DN RL +LG + E K K QE LK VLT Sbjct: 426 FTSRAEYRLLLREDNTLFRLGEHAYRLGLMEEDFYKGLKKDQQEIQDNLKRLKECVLTPS 485 Query: 486 -------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 L I+ K DG + L+ F+++ + S + V+E+++I Sbjct: 486 KEVLKRLNELDENPINDKVDGVS-----LLARDSFNLEKMRSFFSFLTPLNERVLEQIKI 540 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E Y Y +Q ++ K IPKDF + +P LS E EKL +P +L +AS+I Sbjct: 541 ECKYNIYIEKQHENIAKMDSMLKVSIPKDFVFKGIPGLSLEAVEKLEKFRPKSLFEASEI 600 Query: 599 EGMTPAALNLLLIYIKKNTVKLN 621 G+TPA L++L +YI ++ N Sbjct: 601 SGITPANLDVLHLYIHLRHLRKN 623 >gi|167564630|ref|ZP_02357546.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia oklahomensis EO147] Length = 630 Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust. Identities = 273/602 (45%), Positives = 372/602 (61%), Gaps = 15/602 (2%) Query: 27 LGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVK 86 +GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL G M D GIQFR+LN Sbjct: 1 MGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDALGGAMAAATDEGGIQFRILNSS 60 Query: 87 KGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIR 146 KGPAVR R QADR LY+ A++ + +Q NL + Q V E + + V Q R Sbjct: 61 KGPAVRATRAQADRVLYKQAIRHRLENQPNLWLFQQAVDDLMVEGDRVVGAVTQVGVRFR 120 Query: 147 CSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDG 206 VVLT GTFL G IH+G GR GD + SL + + GRLKTGTP R+DG Sbjct: 121 ARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSSRLKELKLPQGRLKTGTPPRIDG 180 Query: 207 KTIIWDKTEKQFADERLIP-FSFMTDKITN-RQIECGITRTNLETHRIIMENIKHSAIYS 264 +TI + K E+Q D IP FSF+ + +Q+ C +T TN TH II + S +Y+ Sbjct: 181 RTIDFSKLEEQPGDLDPIPVFSFIGRAEQHPQQLPCWVTHTNERTHDIIRGGLDRSPMYT 240 Query: 265 GDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIR 324 G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T+ YPNGIST+LP ++Q + + Sbjct: 241 GVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLTTNEFYPNGISTSLPFDVQLELVH 300 Query: 325 TIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLV 384 ++ GLE+ +I+RPGYAIEYDY +P+ L +LETK I+GLF AGQINGTTGYEEAAAQGL+ Sbjct: 301 SMRGLEQAHILRPGYAIEYDYFDPRALKSSLETKAINGLFFAGQINGTTGYEEAAAQGLL 360 Query: 385 AGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADN 444 AGIN+ R + + + C R +Y+GV++DDL ++GV EPYRMFTSRAEYR+SLR DNAD Sbjct: 361 AGINAGRYAQEKEAWCPRRDQAYLGVLVDDLVTRGVSEPYRMFTSRAEYRLSLREDNADM 420 Query: 445 RLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNL---SSTSISFKQDGKT 501 RLT IG +LG + + R F + + L++ +T K L +T++ K Sbjct: 421 RLTEIGRELGVVDDVRWGAFNRKRDAVSRETERLRTTWVTPKTLPAEEATALLGKPIDHE 480 Query: 502 RTAYEFLSYPDFSIQNLFSI----C------PDARKFSSLVIERLQIESSYAAYTGRQMI 551 + E L P S + + + C D + + E+++I Y Y RQ Sbjct: 481 YSLAELLRRPGVSYEGVCELRNGECGPTEPLADDEILLAQIKEQIEIGIKYQGYIERQAG 540 Query: 552 EAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLI 611 E + E +P DY+ + LS E+ +KL+ +P + QAS+I G+TPAA++LL++ Sbjct: 541 EIERNGANENTRLPDGIDYTEVRGLSFEVSQKLNQFRPETIGQASRISGVTPAAISLLMV 600 Query: 612 YI 613 ++ Sbjct: 601 HL 602 >gi|256028336|ref|ZP_05442170.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Fusobacterium sp. D11] gi|289766262|ref|ZP_06525640.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Fusobacterium sp. D11] gi|289717817|gb|EFD81829.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Fusobacterium sp. D11] Length = 633 Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust. Identities = 273/630 (43%), Positives = 380/630 (60%), Gaps = 21/630 (3%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +D+IV+G GHAGCEAA +A++G TA+ T TIG MSCNP++GG K HL REID Sbjct: 2 QEFDIIVVGAGHAGCEAALASARMGMKTAIFTISLDTIGVMSCNPSLGGPAKSHLAREID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G MGR D IQ RVLN +KGPAVR R QAD+ Y M++ + +NL VIQG Sbjct: 62 ALGGEMGRNIDKTFIQIRVLNTRKGPAVRSLRAQADKMAYANEMKKTLEHTDNLSVIQGM 121 Query: 124 VAGFNTE----KNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 V+ E K +I I +++ R V++ TGTFLRG+IHIG++ AGRMG+ S Sbjct: 122 VSELVVEEENGKKVIKGIKIREGLEYRAKAVIIATGTFLRGLIHIGEINFSAGRMGELSS 181 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADE-RLIPFSFMT---DKITN 235 L S K GR KTGTP R+DG+TI + E+Q D+ +++ FS T D + Sbjct: 182 EDLPLSLEKIGLKLGRFKTGTPTRIDGRTIDYSVLEEQPGDKSQVLKFSNRTKDEDALNR 241 Query: 236 RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFL 295 +QI C I TN + H II + S +++G I+ GPRYCPSIEDKI R+ ++N H +FL Sbjct: 242 KQIPCYIAHTNEKVHEIIRNAKERSPLFNGTIQGLGPRYCPSIEDKIFRYPDKNQHHLFL 301 Query: 296 EPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTL 355 E EG T+ +Y G+S++LP ++Q + ++ I G E I+R YAIEYDY+ P+E+ TL Sbjct: 302 EREGYETNEIYLGGLSSSLPVDVQEEMLKNIKGFENAKIMRYAYAIEYDYVPPEEIKYTL 361 Query: 356 ETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDL 415 E++ + LFLAGQINGT+GYEEA AQGL+AGIN+ RK + + R DSYIG +IDDL Sbjct: 362 ESRTVENLFLAGQINGTSGYEEAGAQGLMAGINAVRKLRNEEPVILDRADSYIGTLIDDL 421 Query: 416 TSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLR 475 SKG EPYRMFT+R+EYR+ LR DNAD RLT +G +LG + E +R K ++ + Sbjct: 422 VSKGTNEPYRMFTARSEYRLYLREDNADLRLTKLGYELGLVPEEEYQRVEKKRKDVGIIT 481 Query: 476 SLLKSLVLTSKNLSSTSISFK------QDGKTRTAYEFLSYPDFSIQNLFSICP-----D 524 +L + N I K +DG T E L P+ + +++ I D Sbjct: 482 EILAKTNVGPSNPRVNEILLKRGESPIKDGS--TLLELLRRPEVTFEDIKYISEEIKSVD 539 Query: 525 ARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKL 584 + + +++I Y Y R + ++ K E + IP D DY L + E K+KL Sbjct: 540 LQGYDHDTTYQVEITVKYEGYINRALKMIEKHKSMENKKIPVDIDYDDLKTIPKEAKDKL 599 Query: 585 SILKPFNLLQASKIEGMTPAALNLLLIYIK 614 +KP N+ QAS+I G++PA + +LIY+K Sbjct: 600 KRIKPINIGQASRISGVSPADIQAILIYLK 629 >gi|269204348|ref|YP_003283617.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus ED98] gi|262076638|gb|ACY12611.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus ED98] Length = 594 Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust. Identities = 269/592 (45%), Positives = 376/592 (63%), Gaps = 7/592 (1%) Query: 33 LITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVR 92 ++T I M CNP++GG KG +VREIDAL G M + D IQ R+LN KGPAVR Sbjct: 1 MLTINLDNIAFMPCNPSVGGPAKGIVVREIDALGGQMAKTIDKTHIQMRMLNTGKGPAVR 60 Query: 93 GPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVL 152 R QAD+ LY+ M+R I +ENL ++QG V E N + + + V++ Sbjct: 61 ALRAQADKVLYQQEMKRVIEDEENLHIMQGMVDELIIEDNEVKGVRTNIGTEYLSKAVII 120 Query: 153 TTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWD 212 TTGTFLRG I +G +K +G PS +L ++ + FD R KTGTP R++ KTI + Sbjct: 121 TTGTFLRGEIILGNMKYSSGPNHQLPSITLSDNLRELGFDIVRFKTGTPPRVNSKTIDYS 180 Query: 213 KTEKQFADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGP 272 KTE Q D+ FSF T + Q+ C +T TN ETH++I +N+ SA+YSG IK GP Sbjct: 181 KTEIQPGDDVGRAFSFETTEYILDQLPCWLTYTNAETHKVIDDNLHLSAMYSGMIKGTGP 240 Query: 273 RYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKV 332 RYCPSIEDK VRF ++ HQ+FLEPEG NT+ VY G+ST+LPE +Q Q + TIPGLEK Sbjct: 241 RYCPSIEDKFVRFNDKPRHQLFLEPEGRNTNEVYVQGLSTSLPEHVQRQMLETIPGLEKA 300 Query: 333 NIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARK 392 +++R GYAIEYD I P +L+PTLETK I L+ AGQINGT+GYEEAA QGL+AGIN+A K Sbjct: 301 DMMRAGYAIEYDAIVPTQLWPTLETKMIKNLYTAGQINGTSGYEEAAGQGLMAGINAAGK 360 Query: 393 SNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMK 452 SR+D+YIGV+IDDL +KG EPYR+ TSRAEYR+ LR DNAD RLT +G + Sbjct: 361 VLNTGEKILSRSDAYIGVLIDDLVTKGTNEPYRLLTSRAEYRLLLRHDNADLRLTDMGYE 420 Query: 453 LGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTR-----TAYEF 507 LG I E R RF + Q+ + L + + K T +Q G +R A + Sbjct: 421 LGMISEERYARFNEKRQQIDAEIKRLSDIRI--KPNEHTQAIIEQHGGSRLKDGILAIDL 478 Query: 508 LSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKD 567 L P+ + + I + + ++ V E+++I++ Y Y + + + +++K E++ IP+D Sbjct: 479 LRRPEMTYDIILEILEEEHQLNADVEEQVEIQTKYEGYINKSLQQVEKVKRMEEKKIPED 538 Query: 568 FDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 DYS + +L+ E +EKLS +KP N+ QAS+I G+ PA +++LLIY+++ ++ Sbjct: 539 LDYSKIDSLATEAREKLSEVKPLNIAQASRISGVNPADISILLIYLEQGKLQ 590 >gi|313676468|ref|YP_004054464.1| glucose inhibited division protein a [Marivirga tractuosa DSM 4126] gi|312943166|gb|ADR22356.1| glucose inhibited division protein A [Marivirga tractuosa DSM 4126] Length = 621 Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust. Identities = 303/629 (48%), Positives = 401/629 (63%), Gaps = 31/629 (4%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YD+IV+GGGHAGCEAAA AA +G+ L T +TI MSCNPA+GG+ KG +VREID Sbjct: 3 QDYDLIVVGGGHAGCEAAAAAANMGSKVLLATMNMNTIAQMSCNPAVGGVAKGQIVREID 62 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADR----ELYRLAMQREILSQENLDV 119 AL G G +AD + IQFR+LN KGPA+ PRTQ DR E +RL ++R NLD Sbjct: 63 ALGGYSGIIADKSMIQFRMLNKSKGPAMWSPRTQNDRMRFAEEWRLQLER----IPNLDF 118 Query: 120 IQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 Q VAG E N + I I+ VVLT GTFL G+IHIG+ + GR + S Sbjct: 119 WQEMVAGIIVENNKVVGIETSMGLKIKAKAVVLTNGTFLNGLIHIGEKQFGGGRSAERAS 178 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQI 238 + + F++GR+KTGTP R+DG+TI + K E+Q DE FSF + KI +RQ Sbjct: 179 KGITEQLEELGFESGRMKTGTPPRVDGRTIDYTKIEEQKGDEHPEKFSFSKETKILDRQR 238 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C IT TN H I+ E + S +++G I+ GPRYCPSIEDKI RF ERN HQIF+EPE Sbjct: 239 SCHITYTNPLVHEILEEGFEKSPMFNGRIQGLGPRYCPSIEDKINRFAERNRHQIFVEPE 298 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 G +T VY NG ST+LPE+IQH+ I+ I G + V + RPGYAIEYD+ P +L TLETK Sbjct: 299 GWDTVEVYVNGFSTSLPEDIQHKAIKEIEGFKNVKMFRPGYAIEYDFFPPTQLKTTLETK 358 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 + L+ AGQINGTTGYEEAA QGL+AGIN+ K N+ + +R+++YIGV+IDDL +K Sbjct: 359 LVENLYFAGQINGTTGYEEAACQGLMAGINAHLKINEKEPFVLTRSEAYIGVLIDDLINK 418 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYN-----F 473 G EPYRMFTSRAE+RI LR DNAD RLTP+G ++G + R KY++E F Sbjct: 419 GTDEPYRMFTSRAEHRILLRQDNADVRLTPLGHQIGLASDER----MKYVEEKQLHIDAF 474 Query: 474 LRSLLKSLV---LTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARK--- 527 +++L V + ++NLS + S ++ KT AY L P+ S + L I + + Sbjct: 475 IKNLKTHKVKPNIVNENLSKINSSPIKE-KT-NAYSILKRPEISFKELQQIEDELNQMIN 532 Query: 528 -FSSLVIERLQIESSYAAYTGR--QMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKL 584 +S VIE +I Y +Y + QMIE ++K E I DYS +PALS+E KEKL Sbjct: 533 GYSKEVIEASEIHIKYESYIQKENQMIE--KMKNLEDLKIKDSLDYSQIPALSSEAKEKL 590 Query: 585 SILKPFNLLQASKIEGMTPAALNLLLIYI 613 +KP L QAS+I G+TPA +++L++Y+ Sbjct: 591 RKVKPQTLGQASRISGVTPADISILMVYL 619 >gi|308184015|ref|YP_003928148.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Helicobacter pylori SJM180] gi|308059935|gb|ADO01831.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Helicobacter pylori SJM180] Length = 621 Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust. Identities = 284/627 (45%), Positives = 377/627 (60%), Gaps = 16/627 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M+ S D++V+GGGHAG EA+ +AAK+GA LIT TIG SCNPAIGGLGKGHL + Sbjct: 1 MVKES-DILVVGGGHAGIEASLIAAKMGARVHLITMLIDTIGLASCNPAIGGLGKGHLTK 59 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+D L G MG + D +G+Q+RVLN KGPAVRG R Q D + YR+ + +L+ NL V Sbjct: 60 EVDVLGGAMGIITDHSGLQYRVLNASKGPAVRGTRAQIDMDTYRIFARNLVLNTPNLSVS 119 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q E + I + N+ R V++TTGTFL+GV+HIG+ + GR G++ SN Sbjct: 120 QEMTESLILENDEIVGVTTNINNTYRAKKVIITTGTFLKGVVHIGEHQNQNGRFGENASN 179 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 SL + + F RLKTGT R+ G +I ++ E+ F D FS+ T Q+ C Sbjct: 180 SLALNLRELGFKVERLKTGTCPRVAGNSIDFEGLEEHFGDTNPPYFSYKTKDFNPTQLSC 239 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TNL TH+II +N + ++SG I+ GPRYCPSIEDKI RF E+ HQ+FLEP+ + Sbjct: 240 FITYTNLITHQIIRDNFHRAPLFSGQIEGIGPRYCPSIEDKINRFSEKERHQLFLEPQTI 299 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + Y NG+ST+LP ++Q + I +I GLE I R GYAIEYD+I P EL TLETKKI Sbjct: 300 HKSEYYINGLSTSLPLDVQEKVIHSIKGLENALITRYGYAIEYDFIQPTELTHTLETKKI 359 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GL+LAGQINGTTGYEEAAAQGL+AGIN+A R ++YIGV+IDDL +KG Sbjct: 360 KGLYLAGQINGTTGYEEAAAQGLIAGINAALALKNQAPFILKRNEAYIGVLIDDLVTKGT 419 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DN RL +LG + + K K Q LK Sbjct: 420 NEPYRMFTSRAEYRLLLREDNTLFRLGEHAYRLGLMEQDFYKELKKDQQAIQENLKRLKE 479 Query: 481 LVLTS--------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV 532 VLT L I+ K DG + L+ F+ + + S + V Sbjct: 480 CVLTPSKEVLKRLNELDENPINDKMDGVS-----LLARDSFNAEKMRSFFSFLAPLNERV 534 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 +E+++IE Y Y +Q ++ K IPKDF + +P LS E EKL +P +L Sbjct: 535 LEQIKIECKYNIYIEKQHENIAKMDSMLKVSIPKDFVFKGIPGLSLEAVEKLEKFRPKSL 594 Query: 593 LQASKIEGMTPAALNLLLIYI--KKNT 617 +AS+I G+TPA L++L +YI +KN+ Sbjct: 595 FEASEISGITPANLDVLHLYIHLRKNS 621 >gi|303247211|ref|ZP_07333485.1| glucose inhibited division protein A [Desulfovibrio fructosovorans JJ] gi|302491370|gb|EFL51258.1| glucose inhibited division protein A [Desulfovibrio fructosovorans JJ] Length = 618 Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust. Identities = 274/618 (44%), Positives = 368/618 (59%), Gaps = 9/618 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++D+IV+G GHAGCEAA AA+LG T L+T IG +SCNPAIGGL KGH+VREIDA Sbjct: 2 TFDLIVVGAGHAGCEAAMAAARLGLETLLVTQNVDRIGHLSCNPAIGGLAKGHMVREIDA 61 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G+MG ADAAGIQFR LN +KGPAVR R Q DR+ Y ++ + Q+NL V Q V Sbjct: 62 LGGMMGLWADAAGIQFRTLNTRKGPAVRSTRAQIDRDAYMRVVKAAVFGQDNLTVRQDSV 121 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + + V+LTTGTFL G++HIG K+ GR+GD PS+ L Sbjct: 122 EEVLAVDGRARGVRVASGEDFAARVVLLTTGTFLCGLMHIGLTKLRGGRLGDPPSDGLSA 181 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S + GRLKTGT RL K+I + T Q D PFSF Q+ C +T Sbjct: 182 SLRRHGIALGRLKTGTTPRLLAKSIDFSVTTPQPGDTSPPPFSFHGPGPILPQVPCHLTY 241 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH I S +++G I+ G RYCPS+EDK+ RF ER+ H +FLEPEGL + Sbjct: 242 TNARTHEAIRAGFDRSPLFTGVIEGTGARYCPSVEDKVARFPERDRHHVFLEPEGLESPE 301 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP E Q I TIPGLEK I+RPGYAIEYDY +P +L PTLETK + GL+ Sbjct: 302 IYPNGISTSLPIETQKAMIATIPGLEKAVIVRPGYAIEYDYADPVQLLPTLETKALPGLY 361 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGT+GYEEAA QGL A +N + R +Y V++DDL +KG EPY Sbjct: 362 LAGQINGTSGYEEAAGQGLWAALNVFCALAGREPFLPRRDQAYTAVLVDDLVTKGTSEPY 421 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL- 483 RMFTSRAE+R+ LR NAD RLTP+G +LG +G+R ++ Y ++ L ++++ + Sbjct: 422 RMFTSRAEHRLLLREGNADARLTPMGRELGLVGDR---QWDLYRRKEAALAAVIEGIAAR 478 Query: 484 -----TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 + ++ + ++ E L P+ I +L P+ +++ + Sbjct: 479 RVRPDDCDDADWQTLGGRPHDRSLRLEELLRRPEVGIADLARFWPELGSLDAIIAVEAET 538 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 Y Y RQ A + E L+P DY+++ LS E+ EKL+ + P +L QA +I Sbjct: 539 RIKYEGYLRRQEELAGRMDRLEAVLLPPGIDYAAVAGLSREVVEKLTRIAPRSLGQAGRI 598 Query: 599 EGMTPAALNLLLIYIKKN 616 G+TPAAL+ L I++KK+ Sbjct: 599 SGVTPAALSCLEIHLKKH 616 >gi|16804847|ref|NP_466332.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes EGD-e] gi|47093269|ref|ZP_00231040.1| glucose-inhibited division protein A [Listeria monocytogenes str. 4b H7858] gi|217965983|ref|YP_002351661.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes HCC23] gi|224502776|ref|ZP_03671083.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes FSL R2-561] gi|226225360|ref|YP_002759467.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes Clip81459] gi|254824825|ref|ZP_05229826.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes FSL J1-194] gi|254827378|ref|ZP_05232065.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes FSL N3-165] gi|254930916|ref|ZP_05264275.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes HPB2262] gi|255028099|ref|ZP_05300050.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes LO28] gi|284800303|ref|YP_003412168.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes 08-5578] gi|284993488|ref|YP_003415256.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes 08-5923] gi|290891991|ref|ZP_06554988.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes FSL J2-071] gi|21263664|sp|Q8Y3M5|MNMG_LISMO RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|16412310|emb|CAD01023.1| gidA [Listeria monocytogenes EGD-e] gi|47018343|gb|EAL09105.1| glucose-inhibited division protein A [Listeria monocytogenes str. 4b H7858] gi|217335253|gb|ACK41047.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes HCC23] gi|225877822|emb|CAS06537.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258599756|gb|EEW13081.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes FSL N3-165] gi|284055865|gb|ADB66806.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes 08-5578] gi|284058955|gb|ADB69894.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes 08-5923] gi|290558585|gb|EFD92102.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes FSL J2-071] gi|293582462|gb|EFF94494.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes HPB2262] gi|293594065|gb|EFG01826.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes FSL J1-194] gi|307572400|emb|CAR85579.1| glucose-inhibited division protein A [Listeria monocytogenes L99] gi|328468282|gb|EGF39288.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes 1816] gi|332313240|gb|EGJ26335.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [Listeria monocytogenes str. Scott A] Length = 629 Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust. Identities = 265/619 (42%), Positives = 379/619 (61%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+G GHAG EA + ++GA T ++T + M CNP++GG KG +VREIDA Sbjct: 8 TFDVIVVGAGHAGVEAGLASGRMGAKTLMLTINLDMVAFMPCNPSVGGPAKGVVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ M+ I +EN+ + QG V Sbjct: 68 LGGEMGRNTDKTYIQMRMLNTGKGPAVRALRAQADKWDYQHEMKHTIEKEENITLRQGLV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ ++ TVV+TTGTF RG I +G+L+ +G PS L Sbjct: 128 DRLVIEDGVCKGVITNSGAIYYAKTVVITTGTFSRGEIIVGELRYSSGPNNQQPSVKLSE 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F+ R KTGTP R+ TI + KTE+Q D+ FSF T ++ Q+ C +T Sbjct: 188 HLEELGFELRRFKTGTPPRVKSSTIDYSKTEEQPGDDHPRAFSFDTVEMLLDQLPCWLTY 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +++ K G RYCPSIEDKIVRF ++ HQIFLEPEG NT+ Sbjct: 248 TNETTHEIIQANLHRSPMFTATKKGTGARYCPSIEDKIVRFSDKPRHQIFLEPEGKNTEE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPEE+Q + +RTIPGLE V ++R GYAIEYD + P +L+P+LETK + GLF Sbjct: 308 VYVQGLSTSLPEEVQREMLRTIPGLENVEMMRVGYAIEYDAVMPDQLWPSLETKLVEGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+ARK + + + R +YIGV+IDDL +KG EPY Sbjct: 368 TAGQINGTSGYEEAAGQGLMAGINAARKVFEKEPVILGRDQAYIGVLIDDLVTKGTEEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF-----AKYIQEYNFLRSLLK 479 R+ TSRAEYR+ LR DNAD RLT IG ++G I + R +RF A ++ ++ +K Sbjct: 428 RLLTSRAEYRLLLRHDNADLRLTEIGHEIGLISDERYERFLAKQSAIEAEKERLQKTRIK 487 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 L +DG A + L P+ + + I + + E+++I+ Sbjct: 488 PTAEVQAMLKEIGSGELKDGI--LAADLLRRPEITYDKIAQIVSRETFVTDEIAEQVEIQ 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + ++ +++K E + IP++ DY ++ L+ E EKL ++P ++ QAS+I Sbjct: 546 IKYEGYIQKSNLQVEKMKRMEDKKIPENIDYDAISGLATEALEKLKKIEPLSIAQASRIS 605 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 606 GVNPADISILLVYIEQGKI 624 >gi|295108621|emb|CBL22574.1| glucose-inhibited division protein A [Ruminococcus obeum A2-162] Length = 629 Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust. Identities = 263/623 (42%), Positives = 382/623 (61%), Gaps = 13/623 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + ++ D++V+G GHAGCEAA A+LG T + T +I M CNP +GG KGHLV+E Sbjct: 6 LEKTCDIVVVGAGHAGCEAALAGARLGLDTVMFTVSVDSIALMPCNPNVGGSSKGHLVKE 65 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DAL G MG+ D IQ ++LN KGPAV R QAD++ Y M++ + +QENL + Q Sbjct: 66 LDALGGEMGKNIDKTFIQSKMLNKSKGPAVHSLRAQADKQAYSTEMRKTLENQENLTIKQ 125 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 GEV E I+ + + ++ C VVL TGT+L+ G + G G +N Sbjct: 126 GEVTELLVEDGKITGVKLYSGAIYHCQAVVLCTGTYLKARCIYGDVSNYTGPNGLQAANY 185 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KITNRQIE 239 L +S + R KTGTPAR+ G TI + K E+QF DER++PFSF TD + Q Sbjct: 186 LTDSLKSLGIEMFRFKTGTPARIAGNTIDYSKMEEQFGDERVVPFSFSTDPESVQIPQKS 245 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +T TN +TH II N+ S +YSG I+ GPRYCPSIEDK+VRF ++N HQ+F+EPEG Sbjct: 246 CWLTYTNEKTHEIIRNNLDRSPLYSGMIEGTGPRYCPSIEDKVVRFADKNRHQVFIEPEG 305 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T+ +Y G+S++LPE++Q ++PGLE I++ YAIEYD INP++L+PTLE KK Sbjct: 306 LYTNEMYIGGMSSSLPEDVQDAMYHSVPGLEHAKIVKNAYAIEYDCINPRQLYPTLEFKK 365 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF GQ NG++GYEEAAAQGL+AGIN+A + + + R+++YIGV+IDDL +K Sbjct: 366 IKGLFSGGQFNGSSGYEEAAAQGLIAGINAAMEIKGQEQLVLDRSEAYIGVLIDDLVTKE 425 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGE-------RRQKRFAKYIQEYN 472 EPYRM TSRAEYR+ LR DNAD RL G + G I E R+++ K I Sbjct: 426 NHEPYRMMTSRAEYRLLLRQDNADLRLRKKGYQAGLIDEETYQAVLRKEEAIQKEIDRTE 485 Query: 473 FLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV 532 + + K L + + G T E + P+ + ++L I P+ + V Sbjct: 486 --HATIGGTPQVQKLLEEKGSTLLKSGTTIA--ELIRRPELNYEDLAPIDPERPELPWDV 541 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 ++++I Y Y RQ+ + ++ K E + IP+D DY + +L E ++KL + +P ++ Sbjct: 542 KQQVEINLKYEGYIKRQLKQVEQFKKLEAKKIPEDLDYEKVGSLRIEARQKLELYRPISI 601 Query: 593 LQASKIEGMTPAALNLLLIYIKK 615 QAS+I G++PA +++LL+Y+++ Sbjct: 602 GQASRISGVSPADISVLLVYLEQ 624 >gi|291543432|emb|CBL16541.1| glucose-inhibited division protein A [Ruminococcus sp. 18P13] Length = 650 Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust. Identities = 274/622 (44%), Positives = 376/622 (60%), Gaps = 20/622 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 Y+VIVIG GHAG EAA +A+LG TA+ T I +M CNP+IGG KGHLVREIDAL Sbjct: 28 YEVIVIGAGHAGVEAALASARLGCRTAMFTISLDQIANMPCNPSIGGTAKGHLVREIDAL 87 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ ADA IQ R+LN KGPAV R QADR Y M++ + NLD+ QGEV Sbjct: 88 GGEMGKAADATFIQSRMLNRGKGPAVHSLRVQADRVAYHCYMKQVCEQEPNLDIKQGEVV 147 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 TE + I + ++ VV++TGT+LRG+IH+G+ +G PS L S Sbjct: 148 EILTENGAVCGIRTRLGTVYATRAVVISTGTYLRGLIHVGEASYQSGPDAALPSIQLSES 207 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KITNRQIECGIT 243 R KTGTP R+ ++I +DK E+Q D ++PFSF +D ++ NR + C I Sbjct: 208 LRALHVPLRRFKTGTPCRVHRRSIDFDKLERQDGDPDIVPFSFASDASRMQNR-VSCYIA 266 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +YSG I+ GPRYCPSIEDKIVRF ++ HQ+F+EP GLNTD Sbjct: 267 YTNAQTHAVIRANLHRSPMYSGRIEGVGPRYCPSIEDKIVRFPDKERHQLFVEPMGLNTD 326 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 Y G+S++LPEE+Q F+RTI GLE V I+RP YAIEYD +P L P+LE + + GL Sbjct: 327 EYYLQGMSSSLPEEVQLAFLRTIVGLEHVEIMRPAYAIEYDCCDPTALSPSLEFRGLHGL 386 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ NG++GYEEAAAQGL+AGIN+AR + + R +YIG +IDDL +KG EP Sbjct: 387 FGAGQFNGSSGYEEAAAQGLMAGINAARLVQGKEPVILDRGTAYIGTLIDDLVTKGCNEP 446 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQ----------KRFAKYIQEYNF 473 YRM TSR+EYR+ LR DNAD RL+ IG +G + E R R K +Q N Sbjct: 447 YRMMTSRSEYRLILRQDNADQRLSRIGHSIGLLSEERYAALRAKETAISREIKRVQHCNI 506 Query: 474 LRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVI 533 S + LT+ + + K + + P L PD V Sbjct: 507 APSDAFADFLTNHGTTPLTTGCK-------LADLIRRPQLGYSMLAPFDPDRPVLPEDVG 559 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 +++++E YA Y +Q+ + +++ E++L+P D DYS + L E EKL+ +P N+ Sbjct: 560 QQVELEIKYAGYIEKQLAQVAQMRGLEEKLLPNDADYSQVRGLRLEAAEKLNRQRPINIG 619 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I G++PA +++LL+++ + Sbjct: 620 QASRISGVSPADISVLLVWLSQ 641 >gi|317177029|dbj|BAJ54818.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Helicobacter pylori F16] Length = 621 Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust. Identities = 284/627 (45%), Positives = 378/627 (60%), Gaps = 16/627 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M+ S D++VIGGGHAG EA+ +AAK+GA LIT TIG SCNPAIGGLGKGHL + Sbjct: 1 MVKES-DILVIGGGHAGIEASLIAAKMGARVHLITMLIDTIGLASCNPAIGGLGKGHLTK 59 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+D L G MG + D +G+Q+RVLN KGPAVRG R Q D + YR+ + +L+ NL V Sbjct: 60 EVDVLGGAMGIITDNSGLQYRVLNASKGPAVRGTRAQIDMDTYRIFARNLVLNTPNLSVS 119 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q E + + + N+ + V++TTGTFL+GV+HIG + GR G++ SN Sbjct: 120 QEMTESLIIENDEVLGVTTNINNTYKAKKVIITTGTFLKGVVHIGTHQNQNGRFGENASN 179 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 SL + + F RLKTGT R+ G +I ++ E+ F D FS+ T Q+ C Sbjct: 180 SLALNLRELGFKVERLKTGTCPRVAGNSIDFEGLEEHFGDTNPPHFSYKTKNFNPTQLSC 239 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN TH+II +N + ++SG I+ GPRYCPSIEDKI RF E+ HQ+FLEP+ + Sbjct: 240 FITYTNPITHQIIRDNFHRAPLFSGQIEGIGPRYCPSIEDKINRFSEKERHQLFLEPQTI 299 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + Y NG+ST+LP ++Q + I +I GLE I R GYAIEYD+I P EL TLETKKI Sbjct: 300 HKSEYYINGLSTSLPLDVQEKVIHSIKGLENALITRYGYAIEYDFIQPTELTHTLETKKI 359 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GL+LAGQINGTTGYEEAAAQGL+AGIN+ D R ++YIGV+IDDL +KG Sbjct: 360 KGLYLAGQINGTTGYEEAAAQGLMAGINAVLALKNQDPFILKRNEAYIGVLIDDLVTKGT 419 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNA RL +LG + E + K QE LK Sbjct: 420 NEPYRMFTSRAEYRLLLREDNALFRLGEHAYRLGLMEEDFYEGLKKDKQEIQDHLKRLKE 479 Query: 481 LVLTS--------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV 532 VLT L I+ K DG + L+ F+++ + S + V Sbjct: 480 CVLTPSKEVLKRLNELDENPINDKVDGVS-----LLARDSFNLEKMRSFFSFLTPLNDRV 534 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 +E+++IE Y Y +Q ++ K IPKDF + +P LS E EKL +P +L Sbjct: 535 LEQIKIECKYNIYIEKQHENIAKMDSMLKVSIPKDFVFKGIPGLSLEAVEKLEKFRPKSL 594 Query: 593 LQASKIEGMTPAALNLLLIYI--KKNT 617 +AS+I G+TPA L++L +YI +KN+ Sbjct: 595 FEASEISGITPANLDVLHLYIHLRKNS 621 >gi|262341291|ref|YP_003284146.1| glucose-inhibited division protein A [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272628|gb|ACY40536.1| glucose-inhibited division protein A [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 622 Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust. Identities = 279/624 (44%), Positives = 384/624 (61%), Gaps = 25/624 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IV+GGGHAG EA+ ++ +G+ T L+T TIG MSCNPAIGG+ KG +VREIDAL Sbjct: 6 YDIIVVGGGHAGAEASLASSNIGSKTLLVTTNLQTIGQMSCNPAIGGIAKGQMVREIDAL 65 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G G ++D + IQFR+LN KGPA+ PR Q DR+L+ + + LD+ Q V Sbjct: 66 GGYSGIISDYSMIQFRMLNQSKGPAMWSPRAQCDRKLFSYYWRFFLEKNTQLDLYQDTVT 125 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 EKN + + I+ +V+LT GTFL G IHIG+ KI GR+ + + Sbjct: 126 SLIIEKNQVKGVKTFFGLKIKGKSVILTNGTFLNGKIHIGEKKINGGRIAEQEVRGITEQ 185 Query: 186 FMK-FDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM--TDKITNRQIECGI 242 K F F GR+KTGT R+DG+++ +DK + Q+ D FSF T K+T +Q +C I Sbjct: 186 LTKHFGFKYGRMKTGTSPRVDGRSLNYDKMKSQYGDIHPKKFSFFYETKKLT-KQRKCYI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN + H +I +N S I++G I+ PRYCPSIE+KI RF ++ H IF+EPEG NT Sbjct: 245 TYTNQKVHDLIRKNFNCSPIFTGSIQGVSPRYCPSIEEKIFRFSDKEEHPIFVEPEGWNT 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 VY NG ST+ E+IQ+Q ++ I G EKV I+RPGYAIEYDY P++L PTLE+K I Sbjct: 305 VEVYINGFSTSFSEKIQYQSLKQISGFEKVKILRPGYAIEYDYFPPEQLKPTLESKIIEN 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AGIN++ K ++ + R +YIGV+IDDL +KG E Sbjct: 365 LFFAGQINGTTGYEEAAAQGLIAGINASLKISQKEPFILKRNQAYIGVLIDDLITKGTEE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAK----------YIQEYN 472 PYRMFTSRAEYR+ LR DNAD RLTP+G +G I E + + K Q N Sbjct: 425 PYRMFTSRAEYRMLLRQDNADIRLTPMGYNIGLISEEKMRILDKKKSNIEKCMHLFQNRN 484 Query: 473 FLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI---CPDARKFS 529 F ++ ++ K S D K T LS + I+++ SI + + F Sbjct: 485 FEPKVINPILDDKK-----SPRIYHDKKIET---ILSRSEIDIKDIISIPFLMKEIKNFD 536 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 ++E++ I Y Y R+ AK++ E IP +FDY ++ +LS E +EKL +P Sbjct: 537 QEILEQVSIRIKYKGYIDREKENAKKLLKLENLKIPNNFDYKTIQSLSLEAREKLDYHRP 596 Query: 590 FNLLQASKIEGMTPAALNLLLIYI 613 +L QAS+I G++P+ L++LLI++ Sbjct: 597 VSLAQASRISGVSPSDLSILLIHM 620 >gi|55821969|ref|YP_140411.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus thermophilus LMG 18311] gi|55823886|ref|YP_142327.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus thermophilus CNRZ1066] gi|55737954|gb|AAV61596.1| glucose inhibited division protein A [Streptococcus thermophilus LMG 18311] gi|55739871|gb|AAV63512.1| glucose inhibited division protein A [Streptococcus thermophilus CNRZ1066] Length = 667 Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust. Identities = 275/625 (44%), Positives = 386/625 (61%), Gaps = 16/625 (2%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 + ++DVIV+G GHAG EA+ AA++G L T + M CNP+IGG KG +VREI Sbjct: 40 DENFDVIVVGAGHAGVEASLAAARMGCKVLLATINLEMLAFMPCNPSIGGSAKGIVVREI 99 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G MG+ D IQ ++LN KGPAVR R QAD+ LY + M+ + QENL + Q Sbjct: 100 DALGGEMGKNIDKTYIQMKMLNTGKGPAVRALRAQADKALYAMTMKHTVERQENLTLRQS 159 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 V E + + + N VV+TTGT LRG I IG LK +G S +L Sbjct: 160 MVDEILVEDSKVVGVRTATNQKYGAKAVVVTTGTALRGEIIIGDLKYSSGPNNSLASVTL 219 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIEC 240 ++ + + GR KTGTP R+ +I +++TE Q DE+ FSF++ + QI C Sbjct: 220 ADNLKELGLEIGRFKTGTPPRVKASSINYEETEIQPGDEKPNHFSFLSKDEDYLQDQIPC 279 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +T TN E+H II N+ + ++SG +K GPRYCPSIEDKIVRF ++N HQ+FLEPEG Sbjct: 280 WLTYTNQESHDIINNNLHRAPMFSGIVKGVGPRYCPSIEDKIVRFADKNRHQLFLEPEGR 339 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T+ VY G+ST+LPE++Q + I +I GLEK +IR GYAIEYD + P +L TLETK I Sbjct: 340 ETEEVYVQGLSTSLPEDVQKELIHSIKGLEKAEMIRTGYAIEYDIVLPHQLRATLETKLI 399 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 SGLF AGQ NGT+GYEEAA QGLVAGIN+A K + R+D+YIGVMIDDL +KG Sbjct: 400 SGLFTAGQTNGTSGYEEAAGQGLVAGINAALKVQGKPELILKRSDAYIGVMIDDLVTKGT 459 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL--- 477 LEPYR+ TSRAEYR+ LR DNAD RLTPIG ++G + + R F I++ F R L Sbjct: 460 LEPYRLLTSRAEYRLILRHDNADMRLTPIGREVGLVDDERWNIFK--IKKNQFDRELTRL 517 Query: 478 ----LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYP--DFSIQNLFSICPDARKFSSL 531 LK + T++ + ++ FK TA EF+ P D++ F + P A + Sbjct: 518 SKEKLKPIKETNEKIQ--ALGFKPLTDAMTAKEFMRRPEIDYATATQF-VGPAAEDLDAK 574 Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 VIE L+ E Y Y + + + ++K E++ IP++ D+ ++ +++ E ++K + P Sbjct: 575 VIELLETEIKYEGYINKALDQVAKMKRMEEKKIPENIDWDAIDSIATEARQKFKKINPET 634 Query: 592 LLQASKIEGMTPAALNLLLIYIKKN 616 + QAS+I G+ PA +++L++Y++ N Sbjct: 635 IGQASRISGVNPADISILMVYLEGN 659 >gi|281492460|ref|YP_003354440.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Lactococcus lactis subsp. lactis KF147] gi|281376124|gb|ADA65615.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Lactococcus lactis subsp. lactis KF147] Length = 625 Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust. Identities = 276/620 (44%), Positives = 381/620 (61%), Gaps = 12/620 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDV+VIGGGHAG EA+ AA++G+ T L+T + + M CNP+IGG KG +VREIDA Sbjct: 6 NYDVVVIGGGHAGVEASLAAARMGSKTLLMTINLNMVAFMPCNPSIGGSAKGIVVREIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ ++LN KGPAVR R QAD++ Y +M+ + QENL + QG V Sbjct: 66 LGGEMGRNIDKTYIQMKMLNTGKGPAVRALRAQADKDEYATSMKNTVSDQENLTLRQGMV 125 Query: 125 AGF--NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 + EK + I + TV++TTGT LRG I IG+LK +G S L Sbjct: 126 EELILDEEKKKVIGIKTSTGTKYGAKTVIITTGTALRGEIIIGELKYSSGPNNSLSSIGL 185 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIEC 240 ++ + F+ GR KTGTP R+ +I +DKTE Q DE FSFM+ + QI C Sbjct: 186 ADNLREIGFEIGRFKTGTPPRVLASSIDYDKTEIQPGDEAPNHFSFMSSDENYLKDQIPC 245 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +T T +H I+ +N+ + ++SG +K GPRYCPSIEDKI RF ++ HQ+FLEPEG Sbjct: 246 WLTYTTENSHTILRDNLHRAPLFSGIVKGVGPRYCPSIEDKITRFADKPRHQLFLEPEGR 305 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 NT+ VY G+ST++PE++Q +++IPGLE ++RPGYAIEYD + P +L PTLETK + Sbjct: 306 NTEEVYIGGLSTSMPEDVQFDLVKSIPGLENAQMMRPGYAIEYDVVMPHQLRPTLETKLV 365 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 SGLF AGQ NGT+GYEEAA QGLVAGIN+A K R+++YIGVMIDDL +KG Sbjct: 366 SGLFTAGQTNGTSGYEEAAGQGLVAGINAALKVQGKPEFILKRSEAYIGVMIDDLVTKGT 425 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIG----ERRQKRFAKYIQEYNFLRS 476 LEPYR+ TSRAEYR+ LR DNAD RLT IG ++G + E Q + A++ +E L S Sbjct: 426 LEPYRLLTSRAEYRLILRHDNADRRLTEIGRQVGLVSDEQWEHYQAKMAQFDREMKRLNS 485 Query: 477 -LLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA-RKFSSLVIE 534 LK L T + L +D T EFL P+ + A K VIE Sbjct: 486 EKLKPLPDTQEKLGKLGFGPIKD--ALTGAEFLKRPEVHYNEVIDFIGQAPEKIDRTVIE 543 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 ++ E +Y Y + M + ++ E + IPK+ D+ L +++ E ++K + P L Q Sbjct: 544 LIETEITYEGYIKKAMDQVDKMHRLEAKRIPKNMDWDKLDSIATEARQKFKKINPETLGQ 603 Query: 595 ASKIEGMTPAALNLLLIYIK 614 AS+I G+ PA +++L++Y++ Sbjct: 604 ASRISGVNPADISILMVYLE 623 >gi|78185764|ref|YP_378198.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Synechococcus sp. CC9902] gi|123580595|sp|Q3AUG9|MNMG_SYNS9 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|78170058|gb|ABB27155.1| Glucose-inhibited division protein A subfamily [Synechococcus sp. CC9902] Length = 641 Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust. Identities = 272/618 (44%), Positives = 379/618 (61%), Gaps = 8/618 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 S+DVIV+GGGHAGCEAA A+LG +TAL + I CNPA+GG K LV E+DA Sbjct: 10 SFDVIVVGGGHAGCEAAITTARLGLNTALFSLNLDRIAWQPCNPAVGGPAKSQLVHEVDA 69 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G++GR+ADA IQ R LN +GPAV R Q D+ LY M + + NL + + V Sbjct: 70 LGGVIGRLADATAIQKRTLNASRGPAVWALRAQTDKRLYSRQMLQLLQHTPNLALREAMV 129 Query: 125 AGFNTE----KNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 G E + I + S+ VVLT GTFL G I +G + AGR G+ + Sbjct: 130 TGLEVEGEEEQQRIQGVRTYFGSVYAAQAVVLTAGTFLGGRIWVGHQSMAAGRAGEQAAE 189 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSF-MTDKITNRQIE 239 L + F T RLKTGTPAR+D ++I D+ E+Q +D FSF ++ Q+ Sbjct: 190 GLTETLQGLGFHTDRLKTGTPARVDRRSIALDQLEEQPSDAADRFFSFDPAAWVSGEQMS 249 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C ITRT ETH++I +N+ +AIY G I S GPRYCPSIEDKIVRF ++ HQIFLEPEG Sbjct: 250 CHITRTTAETHQLIRDNLHLTAIYGGVIDSKGPRYCPSIEDKIVRFADKESHQIFLEPEG 309 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 +T +Y G ST LPE IQ Q +R++PGLE+ ++RP Y+++YDY+ +L P+LETK+ Sbjct: 310 RDTPEIYVQGFSTGLPEPIQLQLLRSLPGLEQAVMLRPAYSVDYDYLPATQLKPSLETKR 369 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 +SGLF AGQ+NGTTGYEEAAAQGLVAG+N+AR + D + F R SYIG MIDDL S+ Sbjct: 370 VSGLFSAGQLNGTTGYEEAAAQGLVAGLNAARLIGEQDPVYFPREGSYIGTMIDDLVSQD 429 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 + EPYR+ TSR+EYR+ LR DNAD RLTP+G LG I +RR + F + +Q + + L+ Sbjct: 430 LREPYRVLTSRSEYRLILRGDNADRRLTPLGRDLGLIDDRRWQLFEEKLQAMDAEKKRLE 489 Query: 480 SLVLTSKNLSSTSISFKQDGKTR---TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 S L + + ++ + + T + L P +L V E Sbjct: 490 STRLKVSDPIAPTVEEETGAPIKGSITLADLLRRPAMHAADLVRHGLADGDLPLPVREGA 549 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y+ Y RQ + ++K + +R +P D +Y+++ LSNE +EKLS ++P L QA+ Sbjct: 550 EIDIKYSGYLQRQQQQIDQVKRQSQRKLPSDLNYTNIGTLSNEAREKLSAIQPTTLGQAN 609 Query: 597 KIEGMTPAALNLLLIYIK 614 +I G++ A + LL++++ Sbjct: 610 RIPGVSQADITALLMWLE 627 >gi|329767567|ref|ZP_08259088.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Gemella haemolysans M341] gi|328839194|gb|EGF88778.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Gemella haemolysans M341] Length = 627 Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust. Identities = 269/622 (43%), Positives = 378/622 (60%), Gaps = 3/622 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIGGGHAG EAA +++ G T +IT TIG M CNP++GG KG +VRE+D Sbjct: 6 KEYDVIVIGGGHAGIEAAHASSRKGVKTLMITINLDTIGFMPCNPSVGGPAKGIVVREVD 65 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL GLMGRVAD IQ ++LN KGPAVR R Q+D+ Y+L M+R + NLD+ Q Sbjct: 66 ALGGLMGRVADKTNIQSKMLNTAKGPAVRALRMQSDKVEYQLEMKRILEDTPNLDIEQAM 125 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E N + + + + T+++TTGT+LRG I IG +K +G PS L Sbjct: 126 VRELIIEDNKVVGLRTMLGTAYKAKTIIITTGTYLRGEIVIGDIKYSSGPNHQMPSIDLA 185 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + FD R KTGTP R++ ++ + KT Q DE FS+ T + Q+ C +T Sbjct: 186 KQLEELGFDLVRFKTGTPPRVNADSVDFSKTAIQPGDEEEHAFSYETKEFVKDQVPCWLT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG NT Sbjct: 246 YTNSTTHEIIDKNLGRSAMYSGVIKGTGPRYCPSIEDKYVRFNDKERHQLFLEPEGRNTK 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G+ST+LP+++Q + +I GLE I+R GYAIEYD +NP L+PTLETK I GL Sbjct: 306 EIYVQGLSTSLPDDVQRDMVHSIAGLENAVIMRNGYAIEYDAVNPTTLWPTLETKLIDGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGT+GYEEAA QG++AGIN+A K + + R ++YIGV+IDDL +KG EP Sbjct: 366 FTAGQINGTSGYEEAAGQGIMAGINAACKVLGEEPMILGRDEAYIGVLIDDLVTKGTNEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAE+R+ LR DNAD RLT G + + R +F + + LK+ + Sbjct: 426 YRLLTSRAEHRLLLRHDNADMRLTEKAYNYGLVTKERYNKFCEKRKMVADEIERLKTFRI 485 Query: 484 TSKNLSSTSISFKQDGKTRT---AYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 T + ++ + R A + L P+ S N+ + D V+E+++IE Sbjct: 486 TPTAATLEKLAELNSAEIRDGILAIDMLRRPELSHANVLYLANDDTVLPKDVVEQVEIEV 545 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y + + + +++K + IP D +Y +P+L+ E +EKL + P + QAS+I G Sbjct: 546 KYEGYIKKSLQQVEKLKKMNEMKIPTDLNYDEVPSLALEAREKLKKVLPLTIGQASRISG 605 Query: 601 MTPAALNLLLIYIKKNTVKLNE 622 + PA +++LL+Y+++ NE Sbjct: 606 VNPADISILLVYLEQRRGTNNE 627 >gi|302308765|ref|NP_985802.2| AFR255Wp [Ashbya gossypii ATCC 10895] gi|299790784|gb|AAS53626.2| AFR255Wp [Ashbya gossypii ATCC 10895] Length = 695 Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust. Identities = 266/617 (43%), Positives = 387/617 (62%), Gaps = 24/617 (3%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDG 67 V+VIGGGHAGCEA++ AA+ G L+T IG+ SCNP++GG+GKG L+RE+DALDG Sbjct: 67 VVVIGGGHAGCEASSAAARAGGKATLVTPSLDKIGTCSCNPSMGGIGKGTLLREVDALDG 126 Query: 68 LMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG----- 122 L RV D AG+QF+VLN +G AV GPR Q DR++Y MQR + + L +++G Sbjct: 127 LAPRVTDLAGLQFKVLNRSRGAAVWGPRAQIDRKIYMREMQRVMTNYPGLTLLEGSVDDL 186 Query: 123 -----EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 EVAG T + I +++QD ++R S VVLTTGTFL IHIG PAGR+G++ Sbjct: 187 VVEEKEVAG--TIRRSIRGVILQDQRLLRASRVVLTTGTFLGAEIHIGLQSFPAGRLGEA 244 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT-NR 236 P+ + + DF GRLKTGTPARLD +I + ++F DE P S++ +K+ R Sbjct: 245 PTYGISKTMRGLDFMMGRLKTGTPARLDKNSIDYTGMTREFGDEPPHPMSYLNNKVAAER 304 Query: 237 QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLE 296 Q C T T E H ++ N+ S +K GPRYCPS+E K++RF ++ H+I+LE Sbjct: 305 QEVCFGTHTTKELHAYVVSNLHQSIHIKETVK--GPRYCPSLEAKVLRFPHKDSHRIWLE 362 Query: 297 PEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLE 356 PEG +++V+YPNGIS ++PE++QH+ ++ IPGL V ++ P Y +EYDYI+P+EL TLE Sbjct: 363 PEGWDSEVIYPNGISNSMPEDVQHRMLQMIPGLANVKMLYPAYGVEYDYIDPRELKQTLE 422 Query: 357 TKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 TK++ GL+LAGQINGTTGYEEA AQG+VAG N+ S + R D+Y+GV+IDDL Sbjct: 423 TKRVDGLYLAGQINGTTGYEEACAQGIVAGANAGLASVGKSPLIIGRPDAYVGVLIDDLI 482 Query: 417 SKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRS 476 +KGV EPYRMFT+R+E+R+++R DNAD RLT +G + G +G+ R K F ++ YN + Sbjct: 483 TKGVEEPYRMFTTRSEFRLTVRADNADMRLTDLGHRAGVVGDERWKTFTEHRALYNDIHE 542 Query: 477 LLKSLVLTS---KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDAR----KFS 529 L ++ L + + Q G +A+E Y + ++ L + PD Sbjct: 543 KLNHYTCSNTQWHKLCNEVVRSPQKGV--SAWEMYKYSNINLALLAASVPDLNIDIGSVP 600 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 V+ +L E YA Y +Q + + +E +P + DYS++ ++ E + L+ ++P Sbjct: 601 VHVMHKLDAEGRYAPYLKKQRQQVHAYQADENIRLPDNIDYSTVQGINTEGQLLLNRVRP 660 Query: 590 FNLLQASKIEGMTPAAL 606 L QA +I+G+TP A+ Sbjct: 661 QTLGQARRIQGITPVAM 677 >gi|124024586|ref|YP_001018893.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prochlorococcus marinus str. MIT 9303] gi|166222717|sp|A2CDR8|MNMG_PROM3 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|123964872|gb|ABM79628.1| Glucose inhibited division protein A [Prochlorococcus marinus str. MIT 9303] Length = 653 Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust. Identities = 272/629 (43%), Positives = 381/629 (60%), Gaps = 20/629 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAGCEAA AA+LG STAL T I CNPA+GG K LV E+DAL Sbjct: 11 FDVIVVGGGHAGCEAALTAARLGLSTALFTLNLDRIAWQPCNPAVGGPAKSQLVHEVDAL 70 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G++GR+ADA +Q RVLN +GPAV R Q D+ LY M + + NL + + V Sbjct: 71 GGVIGRLADATALQKRVLNASRGPAVWALRAQTDKRLYSRQMLQLLQQTANLSLREAMVT 130 Query: 126 GFNTEKNI----------------ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKI 169 G + + I+ + S+ R VVLTTGTFL G I +G + Sbjct: 131 GLEVKGDPSGGGEHWEPAQGHAAQITGVRTYFGSIYRAQAVVLTTGTFLGGQIWVGNQSM 190 Query: 170 PAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSF- 228 PAGR G+ + L + F T RLKTGTPAR+D ++I D+ E+Q +D FSF Sbjct: 191 PAGRAGEQAAEGLTEALESLGFQTNRLKTGTPARVDRRSIALDQLEEQPSDAADRFFSFD 250 Query: 229 MTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGER 288 T ++ Q+ C ITRT TH++I EN++ + IY G + S GPRYCPSIEDKIVRF ++ Sbjct: 251 PTTWVSGEQMSCHITRTTASTHQLIKENLELTPIYGGFLDSKGPRYCPSIEDKIVRFADK 310 Query: 289 NGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINP 348 + HQIFLEPEG +T +Y G ST LPE +Q +RT+PGLE+ ++RP YA++YDY+ Sbjct: 311 DSHQIFLEPEGRDTPEIYVQGFSTGLPERLQLDLLRTLPGLEQCIMLRPAYAVDYDYLPA 370 Query: 349 KELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYI 408 +L P+L+TK++ GLF AGQ+NGTTGYEEAAAQGLVAG+N+AR + + + F R SYI Sbjct: 371 TQLSPSLQTKRVKGLFTAGQLNGTTGYEEAAAQGLVAGLNAARLVHGQEQVHFPREGSYI 430 Query: 409 GVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYI 468 G MIDDL SK + EPYR+ TSR+EYR+ LR DNAD RLTP+G +LG I RR + F Sbjct: 431 GTMIDDLVSKDLHEPYRVLTSRSEYRLILRGDNADRRLTPLGYQLGLIDARRWQLFQSKQ 490 Query: 469 QEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTR---TAYEFLSYPDFSIQNLFSICPDA 525 + L+ + + + ++ ++ K K + T + L P +L Sbjct: 491 TALEDEKQRLEKQRIKASDPAAPALEAKTGAKIKGSITLADLLRRPGVHSADLIEHGLVD 550 Query: 526 RKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 + + V E +I+ Y+ Y RQ + ++K + +R +P + DY+++ LS E +EKL+ Sbjct: 551 PELALGVREGAEIDIKYSGYLQRQQQQIDQLKRQSQRRLPANLDYANISTLSKEAREKLT 610 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYIK 614 + P N QAS+I G++ A L LL++++ Sbjct: 611 AVGPLNFAQASQIPGVSKADLTALLVWLE 639 >gi|75909745|ref|YP_324041.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Anabaena variabilis ATCC 29413] gi|123608727|sp|Q3M790|MNMG_ANAVT RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|75703470|gb|ABA23146.1| Glucose-inhibited division protein A subfamily [Anabaena variabilis ATCC 29413] Length = 640 Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust. Identities = 263/623 (42%), Positives = 380/623 (60%), Gaps = 11/623 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+G GH+GCEAA A+LG T L+T I CNPA+GG K L E+DA Sbjct: 12 AFDVIVVGAGHSGCEAALATARLGCRTLLLTLNLDKIAWQPCNPAVGGPAKSQLTHEVDA 71 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G +G++AD +Q R+LN +GPAV R Q D+ Y M+ + +QENL + + V Sbjct: 72 LGGEIGKMADRTYLQKRILNSSRGPAVWALRAQTDKREYAAIMKNIVENQENLSIRESMV 131 Query: 125 A----GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 G N E + + +C V+LTTGTFL G I +G +PAGR G+ + Sbjct: 132 TDLVLGANDE---VIGVETYFGVAFQCKAVILTTGTFLGGKIWVGNKSMPAGRAGEFAAE 188 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIE 239 L + + F+TGRLKTGTPAR+D +++ + K + Q DE + FSF D R Q+ Sbjct: 189 GLTETLNRLGFETGRLKTGTPARVDKRSVDYSKMQLQPGDEEVRWFSFDPDVWVEREQLP 248 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +TRT ETHR+I EN+ S +Y G +++ GPRYCPSIEDKIVRF ++ HQIF+EPEG Sbjct: 249 CHMTRTTPETHRLIRENLHLSPVYGGWVEAKGPRYCPSIEDKIVRFVDKESHQIFIEPEG 308 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 + +Y G ST LPE +Q Q +R++PGLE ++RP YA+EYDY+ + +PTL TKK Sbjct: 309 RDIPELYIQGFSTGLPENLQLQMLRSLPGLENCVMLRPAYAVEYDYLPATQCYPTLMTKK 368 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 ++GLF AGQ+NGTTGYEEAAAQG+VAGIN+AR + I F R SY+G ++DDL +K Sbjct: 369 VAGLFCAGQVNGTTGYEEAAAQGIVAGINAARFVRDQEMIVFPREQSYLGTLVDDLCTKD 428 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 + EPYRM TSR+EYR+ LR DN+D RLTP+G ++G I +RR + F + ++ + L Sbjct: 429 LREPYRMLTSRSEYRLLLRSDNSDQRLTPLGREIGLIDDRRWQLFTRKQEQITGEKERLY 488 Query: 480 SLVLTSKNLSSTSISFKQDGKTR---TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 + + + +I+ + T + L P F +L + + E Sbjct: 489 ATRVKENDEVGKAIASNTQQAIKGSITLADLLRRPGFHYVDLDRYGLGNPELTPAEREGA 548 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y+ Y RQ + ++I + +R +P+D DY+++ LS E +EKL+ +KP + QA+ Sbjct: 549 EIDIKYSGYLARQQSQIEQIARQAQRQLPRDLDYTTVETLSKEAREKLNKVKPMTIGQAA 608 Query: 597 KIEGMTPAALNLLLIYIKKNTVK 619 +I G+ PA +N LLIY++ K Sbjct: 609 RIGGVNPADINALLIYLELRQTK 631 >gi|325478848|gb|EGC81958.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Anaerococcus prevotii ACS-065-V-Col13] Length = 632 Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust. Identities = 274/624 (43%), Positives = 386/624 (61%), Gaps = 22/624 (3%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDV+V+G GHAGCEAA A+LG T ++T +I M CNP IGG GKGH+VREIDA Sbjct: 9 SYDVVVVGAGHAGCEAALATARLGLKTLILTTSLESIADMPCNPNIGGTGKGHIVREIDA 68 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D IQ R+LN KGPAV R QAD++LY M++ + ++ENLD+ + EV Sbjct: 69 LGGQMAINIDKTFIQSRMLNTSKGPAVHSLRVQADKKLYHDEMKKTLENEENLDIFEQEV 128 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 N E I S ++ +++ TGT+L G I IG + +G G S + L + Sbjct: 129 DKINYEDGKIVSCETVQGAIYDTKALIICTGTYLNGKILIGDYEKVSGPHGLSAATFLSD 188 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT---DKITNRQIECG 241 S + F R KTGTPAR+D K++ +KTE Q D +IPFSF+ D Q +C Sbjct: 189 SLEEMGFKLRRFKTGTPARVDRKSLHLEKTEIQKGDSEVIPFSFINEGEDFSDRHQEDCY 248 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T T+ ET IIMEN+ S IY G +K GPRYCPSIEDK+VRF +R+ HQ+F+EPE L+ Sbjct: 249 LTYTSPETKEIIMENLYRSPIYGGHVKGIGPRYCPSIEDKMVRFPDRDVHQVFIEPESLS 308 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 TD +Y G+S++LP+E+Q F +TI GLE V I+RP YAIEYD I+ + L+ TLE+K Sbjct: 309 TDEMYVQGVSSSLPQEVQFDFYKTIIGLEDVKIMRPAYAIEYDMIDTRNLYRTLESKDYE 368 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GL+ AGQING++GYEEAA QG+VAGIN+A K + + R+D+YIGV+IDDL ++G Sbjct: 369 GLYFAGQINGSSGYEEAAGQGIVAGINAALKIKGKEPLILDRSDAYIGVLIDDLVTEGTN 428 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRM TSR EYR+++R DNAD RLT G ++G + E R ++ + + + + LK++ Sbjct: 429 EPYRMMTSRCEYRLTMRQDNADQRLTERGYEIGLVSEDRYQKMKEKRKAIDDEIARLKNV 488 Query: 482 VLTSK--------NLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS 530 +LT K +L ST + D R +++ DF ++ P+ KF Sbjct: 489 ILTPKEEVNEKLVSLGSTPLKNALSLYDLIKRPELDYVKLKDFDLER-----PNLPKFQQ 543 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 + + Q E Y Y +QM + + K E + + K+ DY+ + L E EKL+ ++P Sbjct: 544 I---QAQTEIKYEGYIKKQMADIDKFKKLEAKELDKNIDYTKIAGLKKESAEKLNEIQPE 600 Query: 591 NLLQASKIEGMTPAALNLLLIYIK 614 +L QAS+I G++PA +N+LLI +K Sbjct: 601 SLGQASRISGVSPADINVLLIRLK 624 >gi|113476427|ref|YP_722488.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Trichodesmium erythraeum IMS101] gi|123056547|sp|Q110Q9|MNMG_TRIEI RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|110167475|gb|ABG52015.1| glucose inhibited division protein A [Trichodesmium erythraeum IMS101] Length = 637 Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust. Identities = 271/626 (43%), Positives = 380/626 (60%), Gaps = 29/626 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IV+G GH+GCEAA A+LG T L+T I CNPA+GG K L E+DAL Sbjct: 11 YDIIVVGAGHSGCEAALATARLGCHTLLLTLNLDKIAWQPCNPAVGGPAKSQLTHEVDAL 70 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G +G++AD +Q R+LN +GPAV R Q D+ Y M+ + +QENL V Sbjct: 71 GGEIGKMADRTYLQKRILNSSRGPAVWALRAQTDKREYATIMRNIVENQENLRV------ 124 Query: 126 GFNTEKNIISSIVMQDNSMI-----------RCSTVVLTTGTFLRGVIHIGKLKIPAGRM 174 +++++ +V+ DN I +C V+LTTGTFL GVI +G +PAGR Sbjct: 125 ----RESMVTDLVLGDNEEIIGVETYFGVAFKCKAVILTTGTFLGGVIWVGNKSMPAGRA 180 Query: 175 GDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT 234 G+ + L + K F+TGRLKTGTPAR+D +++ + E Q DE++ F+F + Sbjct: 181 GEFSAIGLSETLNKLGFETGRLKTGTPARVDKRSVDYTDLEAQPGDEKVRWFTFDPEVWV 240 Query: 235 NR-QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQI 293 R Q+ C +TRT ETH++I +N+ S +Y G + + GPRYCPSIEDKIVRF +++ HQI Sbjct: 241 EREQMCCYLTRTTPETHKLIRDNLHLSPVYGGWVDAKGPRYCPSIEDKIVRFADKHSHQI 300 Query: 294 FLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFP 353 F+EPEG + +Y G ST LPE++Q Q ++++PGLE ++RP YA+EYDY+ + +P Sbjct: 301 FIEPEGRDIPELYIQGFSTGLPEKLQLQMLQSLPGLENCLMLRPAYAVEYDYLPATQCYP 360 Query: 354 TLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMID 413 TL TKKI GLF AGQINGTTGYEEAAAQGLVAGIN+ + + I F R SYIG +ID Sbjct: 361 TLMTKKIEGLFCAGQINGTTGYEEAAAQGLVAGINAVKFVKNEEMIIFPREQSYIGTLID 420 Query: 414 DLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNF 473 DL +K + EPYRM TSR+EYR+ LR DNAD RLTP+G ++G I +RR + F N Sbjct: 421 DLCTKDLREPYRMLTSRSEYRLILRSDNADQRLTPLGREIGLIDDRRWELFESKQANINS 480 Query: 474 LRSLLKSLVLTSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKF 528 +S L S + K L +I+ D T+ T + L P F +L Sbjct: 481 EKSRLNSTRI--KELDEVAINIVADTHTKIKGSITLADLLRRPGFHYVDLEKYNLGNLDL 538 Query: 529 SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 + E +I+ Y+ Y RQ + +I ++ R +P + DY S+ LS E +EKLS ++ Sbjct: 539 KLVEKEGAEIDIKYSGYLQRQQNQIDQISRQKNRRLPTNLDYLSISTLSLEAREKLSKVQ 598 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIK 614 P + QAS+I G+ PA +N LL+Y++ Sbjct: 599 PLTIGQASRIGGVNPADINALLVYLE 624 >gi|237797099|ref|YP_002864651.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium botulinum Ba4 str. 657] gi|229261234|gb|ACQ52267.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium botulinum Ba4 str. 657] Length = 625 Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust. Identities = 273/619 (44%), Positives = 392/619 (63%), Gaps = 15/619 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DV+VIG GHAGCEAA +A++G T + T +I M+CNP IGG KGHLVREIDAL Sbjct: 8 FDVVVIGAGHAGCEAALASARMGCKTLICTMNLDSIALMACNPNIGGTAKGHLVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG D IQ R+LN KGPAV R QAD++ Y M+ + +EN+ + Q EV Sbjct: 68 GGEMGINIDHTFIQSRMLNTSKGPAVHSLRAQADKKRYSERMKHLLEKEENVVLRQLEVI 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + E N + ++ ++ + ++L TGT+L+G I IG + +G G P+N L S Sbjct: 128 EIDVEDNEVKGVLTKNGAYFTTKAIILCTGTYLKGKIIIGDIIYSSGPSGLYPANDLSQS 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + + R KTGTPAR++ +++ + K +Q DE+++PFSF+ DK+ QI C +T T Sbjct: 188 LLDLGINLRRFKTGTPARINKRSVDFSKMIEQPGDEKIVPFSFIHDKLDKDQISCYLTYT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 + ETH+II ENI S +Y+G I+ GPRYCPSIEDKIVRF +++ HQIF+EPEG NT+ + Sbjct: 248 SEETHKIIHENIHRSPLYNGSIEGVGPRYCPSIEDKIVRFPDKDKHQIFIEPEGENTEEL 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y +G+S++LPE++Q + R++PGLE I+R YAIEYD I+P++L TLE K I+GL+ Sbjct: 308 YVSGMSSSLPEDVQIKMYRSVPGLENAQILRTAYAIEYDCIDPQQLDLTLEFKNINGLYG 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ NG++GYEEAAAQGL+AGIN+ K + + + R+D+YIGV+IDDL +KG EPYR Sbjct: 368 AGQFNGSSGYEEAAAQGLIAGINAVLKIKEENPLILKRSDAYIGVLIDDLVTKGTNEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 M TSRAEYR+ LR DNAD RLT +G K+G + E R +F + L+++ +T Sbjct: 428 MMTSRAEYRLLLRQDNADLRLTELGYKVGLVKEDRYNKFLNRKKNVENEIERLRNMQITG 487 Query: 486 KN------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV---IERL 536 K L S K K + YE + P+ + F + P K SL E + Sbjct: 488 KREINEFLLEKGSTELK---KPISLYELIKRPEL---DYFKVEPLDDKRPSLSDDEKEEI 541 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 I + Y Y +Q+ + ++ K E RLIPK+ +Y + L E +KL +KP N+ QAS Sbjct: 542 NIIAKYEGYINKQLEQVEQFKKYEDRLIPKNINYLDIKGLRLEAIQKLKKIKPINIGQAS 601 Query: 597 KIEGMTPAALNLLLIYIKK 615 +I G++PA +++LLIY+++ Sbjct: 602 RISGVSPADISVLLIYMER 620 >gi|254430251|ref|ZP_05043954.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cyanobium sp. PCC 7001] gi|197624704|gb|EDY37263.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cyanobium sp. PCC 7001] Length = 662 Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust. Identities = 265/626 (42%), Positives = 376/626 (60%), Gaps = 16/626 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 S+DVIV+GGGHAGCE+A AA+LG STAL T I CNPA+GG K LV E+DA Sbjct: 8 SFDVIVVGGGHAGCESAVTAARLGLSTALFTLNLDRIAWQPCNPAVGGPAKSQLVHEVDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G++GR+ADA +Q RVLN +GPAV R Q D+ Y M + + NL + + V Sbjct: 68 LGGMIGRLADATALQKRVLNASRGPAVWALRAQTDKRQYARQMLQLLQHTPNLALREAMV 127 Query: 125 AGFNTEKNI------------ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAG 172 G E I+ + S+ V+LTTGTFL G I +G + AG Sbjct: 128 TGLEVELEQPTEAQGPGPIGRITGVRTYFGSVYAAPAVILTTGTFLGGQIWVGHQSMRAG 187 Query: 173 RMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSF-MTD 231 R G+ + L + F GRLKTGTPAR+D ++I D+ E+Q +D FSF Sbjct: 188 RAGEPAAEGLTEALQALGFAMGRLKTGTPARVDRRSIALDRLEEQPSDAEGRYFSFDPAA 247 Query: 232 KITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGH 291 ++ + C ITRT THR+I +N+ + IY G I S GPRYCPSIEDKIVRF ++ H Sbjct: 248 WVSGEPMSCHITRTTAATHRLIQDNLHLTPIYGGVIDSKGPRYCPSIEDKIVRFADKESH 307 Query: 292 QIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKEL 351 QIFLEPEG +T +Y G ST LPE +Q + +RT+PGLE+ ++RP YA++YDY+ +L Sbjct: 308 QIFLEPEGRDTPEIYVQGFSTGLPERLQLELLRTLPGLEQCVMLRPAYAVDYDYLPATQL 367 Query: 352 FPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 P+LETK+I+GLF AGQ+NGTTGYEEAAAQGLVAG+N+AR+ + F R SYIG M Sbjct: 368 KPSLETKRITGLFSAGQLNGTTGYEEAAAQGLVAGLNAARQLRGQAPVHFPRETSYIGTM 427 Query: 412 IDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEY 471 IDDL +K + EPYR+ TSR+EYR+ LR DNAD RLTP+G++LG I RR + + + Sbjct: 428 IDDLITKDLREPYRVLTSRSEYRLVLRGDNADRRLTPLGLELGLIDARRWQIYTAKQEAI 487 Query: 472 NFLRSLLKSLVLTSKNLSSTSISFKQDGKTR---TAYEFLSYPDFSIQNLFSICPDARKF 528 + L + L + + ++ ++ + + T + L P F +L Sbjct: 488 EAEKRRLAMVRLKASDPAAAAVEAETGAAIKGSITLADLLRRPGFHSADLVRHGLAGSDL 547 Query: 529 SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 + V E +I+ Y+ Y RQ + +++ + R +P DY+ + LS+E +EKL+ ++ Sbjct: 548 PAEVREGAEIDIKYSGYLARQQQQIDQVRRQADRPLPAGLDYAGIGTLSHEAREKLAAVQ 607 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIK 614 P L QAS++ G++PA + L+++++ Sbjct: 608 PHTLGQASRVPGVSPADITALMLWLE 633 >gi|46908999|ref|YP_015388.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes serotype 4b str. F2365] gi|67460831|sp|Q71VV1|MNMG_LISMF RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|46882272|gb|AAT05565.1| glucose-inhibited division protein A [Listeria monocytogenes serotype 4b str. F2365] Length = 632 Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust. Identities = 265/619 (42%), Positives = 378/619 (61%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+G GHAG EA + ++GA T ++T + M CNP++GG KG +VREIDA Sbjct: 8 TFDVIVVGAGHAGVEAGLASGRMGAKTLMLTINLDMVAFMPCNPSVGGPAKGVVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ M+ I +EN+ + QG V Sbjct: 68 LGGEMGRNTDKTYIQMRMLNTGKGPAVRALRAQADKWDYQHEMKHTIEKEENITLRQGLV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ ++ TVV+TTGTF RG I +G+L+ +G PS L Sbjct: 128 DRLVIEDGVCKGVITNSGAIYYAKTVVITTGTFSRGEIIVGELRYSSGPNNQQPSVKLSE 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F+ R KTGTP R+ TI + KTE+Q D+ FSF T ++ Q+ C +T Sbjct: 188 HLEELGFELRRFKTGTPPRVKSSTIDYSKTEEQPGDDHPRAFSFDTVEMLLDQLPCWLTY 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +++ K G RYCPSIEDKIVRF ++ HQIFLEPEG NT+ Sbjct: 248 TNETTHEIIQANLHRSPMFTATKKGTGARYCPSIEDKIVRFSDKPRHQIFLEPEGKNTEE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPEE+Q + +RTIPGLE V ++R GYAIEYD + P +L+P+LETK + GLF Sbjct: 308 VYVQGLSTSLPEEVQREMLRTIPGLENVEMMRVGYAIEYDAVMPDQLWPSLETKLVEGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+ARK + + R +YIGV+IDDL +KG EPY Sbjct: 368 TAGQINGTSGYEEAAGQGLMAGINAARKVFAKEPVILGRDQAYIGVLIDDLVTKGTEEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF-----AKYIQEYNFLRSLLK 479 R+ TSRAEYR+ LR DNAD RLT IG ++G I + R +RF A ++ ++ +K Sbjct: 428 RLLTSRAEYRLLLRHDNADLRLTEIGHEIGLISDERYERFLAKQSAIEAEKERLQKTRIK 487 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 L +DG A + L P+ + + I + + E+++I+ Sbjct: 488 PTAEVQAMLKEIGSGELKDGI--LAADLLRRPEITYDKIAQIVSRETFVTDEIAEQVEIQ 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + ++ +++K E + IP++ DY ++ L+ E EKL ++P ++ QAS+I Sbjct: 546 IKYEGYIQKSNLQVEKMKRMEDKKIPENIDYDAISGLATEALEKLKKIEPLSIAQASRIS 605 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 606 GVNPADISILLVYIEQGKI 624 >gi|310778408|ref|YP_003966741.1| glucose inhibited division protein A [Ilyobacter polytropus DSM 2926] gi|309747731|gb|ADO82393.1| glucose inhibited division protein A [Ilyobacter polytropus DSM 2926] Length = 628 Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust. Identities = 277/622 (44%), Positives = 383/622 (61%), Gaps = 12/622 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+G GHAGC+AA AA++G TA+ T IG MSCNP+IGG K HLV+EIDA Sbjct: 3 NFDVIVVGAGHAGCDAALAAARMGMKTAIFTITLDNIGVMSCNPSIGGPAKSHLVKEIDA 62 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KKGPAVR R QAD++LY + M++ I + +NL+ IQG V Sbjct: 63 LGGEMGRNIDKTFIQMRILNTKKGPAVRSLRAQADKQLYHMEMKKTIENTDNLESIQGMV 122 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E I + + R V++ +GTF+RG+IH+G + GRMG+ PS+ L Sbjct: 123 TEVLVEDGKIVGVKTKVGVEYRAKAVIIASGTFMRGLIHVGDKQFRGGRMGELPSDELPI 182 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNR-QIECG 241 S K GR KTGTP R+D +TI + K E+Q D+ L+ FS T +I R QI C Sbjct: 183 SLEKIGLKLGRFKTGTPPRIDARTIDYSKIEEQPGDKELLKFSDRTPYSEIEGRKQIPCH 242 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 I TN + H I+++ S +++G I+ GPRYCPSIEDK+ R+ ++ H +FLE EG Sbjct: 243 IVFTNEKVHETILKSKSRSPLFNGTIQGTGPRYCPSIEDKVFRYQDKTRHHLFLEKEGYG 302 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ VY +G S++LP ++Q++ +R I GLE I+R YAIEYDYI P+EL +LETKKI Sbjct: 303 TNEVYISGFSSSLPSDVQYEMLRKIEGLENAKIMRYAYAIEYDYILPEELKFSLETKKID 362 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GL+LAGQINGT+GYEEAA+QGL+AGIN++RK D + R DSYIG +IDDL +KG Sbjct: 363 GLYLAGQINGTSGYEEAASQGLIAGINASRKIQGKDPVVLDRADSYIGTLIDDLVTKGTN 422 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFT+R+EYR+ LR DNAD RL+ IG ++G + + +R K E + L+ Sbjct: 423 EPYRMFTARSEYRLMLREDNADLRLSKIGYEIGLLQKEDYERVLKKENETAEIIEKLELQ 482 Query: 482 VLTSKNLSSTSISFKQDGKT----RTAYEFLSYPDFSIQNLFSICP-----DARKFSSLV 532 + S N + K T E L P + Q++ + D +S Sbjct: 483 YVGSSNERVNEVLEKAKEPALKSGTTLKELLRRPRVTFQDIKYVAELVENFDLDGYSKDA 542 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 + +++ YA Y R + ++ K E + IP DFDY ++ L E KEKL +KP N+ Sbjct: 543 EYQAEVQVKYAGYIERSLKMIEKHKAIEGKKIPDDFDYETVSGLPREAKEKLKGVKPMNI 602 Query: 593 LQASKIEGMTPAALNLLLIYIK 614 QAS+I G++PA + +LLI +K Sbjct: 603 GQASRISGVSPADIQVLLINLK 624 >gi|328858224|gb|EGG07337.1| hypothetical protein MELLADRAFT_62641 [Melampsora larici-populina 98AG31] Length = 665 Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust. Identities = 269/623 (43%), Positives = 385/623 (61%), Gaps = 15/623 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAG EAA+ AA+ AST L+T+ T+G MSCNP+ GG+GKG LVREIDAL Sbjct: 40 YDVIVLGGGHAGTEAASGAARCNASTLLVTNSWKTVGEMSCNPSFGGIGKGTLVREIDAL 99 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+ G+ D AGI F++LN KGPAV GPR Q DR+LY+ ++Q ++ L + +G V Sbjct: 100 GGICGKACDEAGIVFQMLNRSKGPAVYGPRAQMDRQLYKQSVQNQLQKFNQLAIKEGTVT 159 Query: 126 GFNTEKN-----------IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRM 174 E + +S + + +I+C ++V+ TGTFL G IHIG P GR+ Sbjct: 160 DLILEHDNLLHRSSGHQARVSGLKLDTGEIIKCKSLVIATGTFLGGEIHIGMKSSPFGRI 219 Query: 175 GDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT 234 G+S S SL NS F RLKTGTP RL TI + Q D+ PFSFM + Sbjct: 220 GESSSTSLSNSLKNVGFKLERLKTGTPPRLLKNTINFSNLFIQNGDQPPTPFSFMNQTVQ 279 Query: 235 N--RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQ 292 N Q+ C T TN +TH I+ +N+ + +++ GPRYCPS+E K+V+F +R+ H Sbjct: 280 NATNQLCCWKTHTNAQTHDIVRKNLDKTVHIREEVR--GPRYCPSLESKVVKFPDRDSHM 337 Query: 293 IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF 352 I+LEPEG +D++YPNG+ST +P + Q Q +R+I GLE V I +PGY +EYD+++PKEL Sbjct: 338 IWLEPEGYESDLIYPNGLSTTIPPDAQLQMLRSIQGLEAVEIHQPGYGVEYDHVDPKELT 397 Query: 353 PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMI 412 TLETK+I GLFLAGQINGTTGYEEA AQG++AGIN+ S + +R DS+IGV++ Sbjct: 398 NTLETKRIKGLFLAGQINGTTGYEEAGAQGVLAGINAGLSSQNALPLILTRADSFIGVLV 457 Query: 413 DDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYN 472 DDL +KGV EPYRMFTSR+E+R+SLR DNAD RLT ++G I E R + + + Sbjct: 458 DDLITKGVQEPYRMFTSRSEFRVSLRADNADLRLTKKARQVGVIDEDRWATVERTKTQID 517 Query: 473 FLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV 532 L+++ L+ + S I ++D ++A++ L I+ L P + + Sbjct: 518 RSIEALQAVCLSQRAWSQVGIKVREDASLKSAFDVLRVQGVKIEQLCETVPQLKNVDPDI 577 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 R+++E+ Y R A++++ +E +P + DY +L LS E + +L +P L Sbjct: 578 WRRIEVEALYRPIANRYEHNARQLEADELCRLPPNLDYHTLEYLSIEARHRLDSARPETL 637 Query: 593 LQASKIEGMTPAALNLLLIYIKK 615 A ++EG+ P AL LL ++++ Sbjct: 638 GAAKRLEGIDPNALILLSKHLRQ 660 >gi|168183720|ref|ZP_02618384.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium botulinum Bf] gi|182673272|gb|EDT85233.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium botulinum Bf] Length = 625 Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust. Identities = 273/620 (44%), Positives = 391/620 (63%), Gaps = 15/620 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DV+VIG GHAGCEAA +A++G T + T +I M+CNP IGG KGHLVREIDA Sbjct: 7 DFDVVVIGAGHAGCEAALASARMGCKTLICTMNLDSIALMACNPNIGGTAKGHLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG D IQ R+LN KGPAV R QAD++ Y M+ + +EN+ + Q EV Sbjct: 67 LGGEMGINIDHTFIQSRMLNTSKGPAVHSLRAQADKKRYSERMKHLLEKEENVVLRQLEV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + E N + ++ ++ + ++L TGT+L+G I IG + +G G P+N L Sbjct: 127 IEIDVEDNEVKGVLTKNGAYFTTKAIILCTGTYLKGKIIIGDIIYSSGPSGLYPANDLSQ 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S + + R KTGTPAR++ +++ + K +Q DE+++PFSF+ DK+ QI C +T Sbjct: 187 SLLDLGINLRRFKTGTPARINKRSVDFSKMIEQPGDEKIVPFSFIHDKLDKDQISCYLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETH+II ENI S +Y+G I+ GPRYCPSIEDKIVRF +++ HQIF+EPEG NT+ Sbjct: 247 TSEETHKIIHENIHRSPLYNGSIEGVGPRYCPSIEDKIVRFPDKDKHQIFIEPEGENTEE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+S++LPE++Q + R++PGLE I+R YAIEYD I+P++L TLE K I+GL+ Sbjct: 307 LYVGGMSSSLPEDVQIKMYRSVPGLENAQILRTAYAIEYDCIDPQQLDLTLEFKNINGLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ NG++GYEEAAAQGL+AGIN+ K + + + R+D+YIGV+IDDL +KG EPY Sbjct: 367 GAGQFNGSSGYEEAAAQGLIAGINAVLKIKEENPLILKRSDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSRAEYR+ LR DNAD RLT +G K+G + E R +F + L+++ +T Sbjct: 427 RMMTSRAEYRLLLRQDNADLRLTELGYKVGLVKEDRYNKFLNRKKNVENEIERLRNMQIT 486 Query: 485 SKN------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV---IER 535 K L S K K + YE + P+ + F + P K SL E Sbjct: 487 GKREINEFLLEKGSTELK---KPISLYELIKRPEL---DYFKVEPLDDKRPSLSDDEKEE 540 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 + I + Y Y +Q+ + ++ K E RLIPK+ +Y + L E +KL +KP N+ QA Sbjct: 541 INIIAKYEGYINKQLEQVEQFKKYEDRLIPKNINYLDIKGLRLEAIQKLKKIKPINIGQA 600 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G++PA +++LLIY+++ Sbjct: 601 SRISGVSPADISVLLIYMER 620 >gi|170760523|ref|YP_001788984.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium botulinum A3 str. Loch Maree] gi|205831525|sp|B1KUB1|MNMG_CLOBM RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|169407512|gb|ACA55923.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium botulinum A3 str. Loch Maree] Length = 625 Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust. Identities = 274/619 (44%), Positives = 389/619 (62%), Gaps = 15/619 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DV+VIG GHAGCEAA +A++G T + T +I M+CNP IGG KGHLVREIDAL Sbjct: 8 FDVVVIGAGHAGCEAALASARMGCKTLICTMNLDSIALMACNPNIGGTAKGHLVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG D IQ R+LN KGPAV R QAD++ Y M+ + +EN+ + Q EV Sbjct: 68 GGEMGINIDHTFIQSRMLNTSKGPAVHSLRAQADKKRYSERMKHLLEKEENVVLRQLEVI 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + E N + ++ ++ + ++L TGT+L+G I IG + +G G P+N L S Sbjct: 128 EIDVEDNEVKGVLTKNGAYFTTKAIILCTGTYLKGKIIIGDIIYSSGPSGLYPANDLSQS 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + + R KTGTPAR++ +++ + K +Q DE+++PFSF+ DK+ QI C +T T Sbjct: 188 LLDLGINLRRFKTGTPARINKRSVDFSKMVEQPGDEKIVPFSFIHDKLDKDQISCYLTYT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 + ETH+II ENI S +Y+G I+ GPRYCPSIEDKIVRF +++ HQIF+EPEG NT+ + Sbjct: 248 SEETHKIIHENIHRSPLYNGSIEGIGPRYCPSIEDKIVRFPDKDKHQIFIEPEGENTEEL 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+S++LPE++Q + R++PGLE I+R YAIEYD I+P++L TLE K I+GL+ Sbjct: 308 YVGGMSSSLPEDVQIKMYRSVPGLENAEILRTAYAIEYDCIDPQQLDLTLEFKNINGLYG 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ NG++GYEEAAAQGLVAGIN+ K D + R+D+YIGV+IDDL +KG EPYR Sbjct: 368 AGQFNGSSGYEEAAAQGLVAGINAVLKIKGKDPLILKRSDAYIGVLIDDLVTKGTNEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 M TSRAEYR+ LR DNAD RLT +G ++G + E R ++ + +K + +T Sbjct: 428 MMTSRAEYRLLLRQDNADLRLTEMGYRIGLVKEDRYNKYLNRKKNVENEIERIKKVQITG 487 Query: 486 KN------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICP--DAR-KFSSLVIERL 536 K L S K K + YE + P+ + F + P D R S E + Sbjct: 488 KKEINEFLLEKGSTELK---KPISLYELIKRPEL---DYFKVEPLDDKRPNLSDDEKEEI 541 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 I + Y Y +Q+ + ++ K E RLIPK +YS + L E +KL +KP N+ QAS Sbjct: 542 NIIAKYEGYINKQLEQVEQFKKYENRLIPKSINYSDIKGLRIEAIQKLEKIKPINIGQAS 601 Query: 597 KIEGMTPAALNLLLIYIKK 615 +I G++PA +++LLIY+++ Sbjct: 602 RISGVSPADISVLLIYMER 620 >gi|307721845|ref|YP_003892985.1| glucose inhibited division protein A [Sulfurimonas autotrophica DSM 16294] gi|306979938|gb|ADN09973.1| glucose inhibited division protein A [Sulfurimonas autotrophica DSM 16294] Length = 637 Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust. Identities = 272/631 (43%), Positives = 384/631 (60%), Gaps = 23/631 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAG EA+ +A++G T L++ +G+ SCNPA+GGL KGHLVRE+DAL Sbjct: 3 YDVIVVGGGHAGIEASLASARMGNKTLLVSMLAENVGATSCNPAVGGLAKGHLVRELDAL 62 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG + D AGIQFR+LN KGPAVRG R Q D + YR+ + +L NLD+ Q V Sbjct: 63 GGEMGLITDEAGIQFRILNQTKGPAVRGSRAQIDMDKYRVIARNVVLGTPNLDLAQDTVE 122 Query: 126 GFNTEKNI-------------ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAG 172 E + + +V + R + V++T+GTFL G+IH+G+++ G Sbjct: 123 SLIIEDKVNSEAREGTLGCKEVKGVVTTLLNEYRANKVIITSGTFLNGIIHVGEVQQIGG 182 Query: 173 RMGDSPSNSLFNSFMKFD--FDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT 230 R G+ S L S +K D + RLKTGT AR+D +I + E+Q DE PFSF T Sbjct: 183 RYGEQRSVGLSAS-LKNDCGLNIARLKTGTCARIDSSSIDFSVMEEQGGDELPNPFSFRT 241 Query: 231 DK----ITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFG 286 D+ T Q+ C I TN TH+II N + +++G I PRYCPSIEDKI +F Sbjct: 242 DREKFRATKEQLPCYIAYTNETTHKIIESNFYRAPLFTGQIAGKSPRYCPSIEDKIDKFP 301 Query: 287 ERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI 346 +++ H +FLEP+ + +Y NG+ST+LP E+Q I ++ G+E I+R GYAIEYD++ Sbjct: 302 DKDRHHLFLEPQTMENTEIYVNGMSTSLPPEVQRDMIHSVQGMENAKIVRYGYAIEYDFV 361 Query: 347 NPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDS 406 +P+EL +LETKKI GL+LAGQINGTTGYEEAAAQG++AGIN+ + + R ++ Sbjct: 362 DPRELKHSLETKKIKGLYLAGQINGTTGYEEAAAQGIMAGINAGLALQGKEPLILRRDEA 421 Query: 407 YIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAK 466 YIGV+IDDL +KG EPYRMFTSRAEYR+ LR ++AD RL G +LG + + +R Sbjct: 422 YIGVLIDDLVTKGTNEPYRMFTSRAEYRLLLREESADVRLGHYGHELGLVSDEEYERIKL 481 Query: 467 YIQEYNFLRSLLKSLVLT-SKNLSSTSISFKQD--GKTRTAYEFLSYPDFSIQNLFSICP 523 Q+ LL+ T +K ++ S + TA + ++ F ++ + I P Sbjct: 482 KAQQIREGAQLLEETKFTPNKEFNALLASMDEQPLKDVSTAQQLVARKTFDVEKMIKIVP 541 Query: 524 DARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEK 583 + K+ + + + +E YA Y +Q E + +K K IP+DFD+S + LSNE++EK Sbjct: 542 ELDKYDDYIKDEILVEGKYARYVDKQSQEIERMKKYLKIAIPQDFDFSIVSGLSNEIQEK 601 Query: 584 LSILKPFNLLQASKIEGMTPAALNLLLIYIK 614 L+ P L A I G+TPAA+ +L IYIK Sbjct: 602 LAEFNPPTLQAAMNISGITPAAIEILHIYIK 632 >gi|33864441|ref|NP_896001.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prochlorococcus marinus str. MIT 9313] gi|81170570|sp|Q7TUJ1|MNMG_PROMM RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|33641221|emb|CAE22351.1| Glucose inhibited division protein A family [Prochlorococcus marinus str. MIT 9313] Length = 653 Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust. Identities = 271/629 (43%), Positives = 380/629 (60%), Gaps = 20/629 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI++GGGHAGCEAA AA+LG STAL T I CNPA+GG K LV E+DAL Sbjct: 11 FDVIIVGGGHAGCEAAITAARLGLSTALFTLNLDRIAWQPCNPAVGGPAKSQLVHEVDAL 70 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G++GR+ADA +Q RVLN +GPAV R Q D+ LY M + + NL + + V Sbjct: 71 GGVIGRLADATALQKRVLNASRGPAVWALRAQTDKRLYSRQMLQLLQQTANLSLREAMVT 130 Query: 126 GFNTEKNI----------------ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKI 169 G + + I+ + S+ R VVLTTGTFL G I +G + Sbjct: 131 GLEVKGDPSGGGEHWEPAQGHAAQITGVRTYFGSIYRAQAVVLTTGTFLGGQIWVGNQSM 190 Query: 170 PAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSF- 228 PAGR G+ + L + F T RLKTGTPAR+D ++I D+ E+Q +D FSF Sbjct: 191 PAGRAGEQAAEGLTEALESLGFQTNRLKTGTPARVDRRSIALDQLEEQPSDAADRFFSFD 250 Query: 229 MTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGER 288 T ++ Q+ C ITRT TH++I EN++ + IY G + S GPRYCPSIEDKIVRF ++ Sbjct: 251 PTAWVSGEQMSCHITRTTASTHQLIKENLELTPIYGGFLDSKGPRYCPSIEDKIVRFADK 310 Query: 289 NGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINP 348 + HQIFLEPEG +T +Y G ST LPE +Q +RT+PGLE+ ++RP YA++YDY+ Sbjct: 311 DSHQIFLEPEGRDTPEIYVQGFSTGLPERLQLDLLRTLPGLEQCVMLRPAYAVDYDYLPA 370 Query: 349 KELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYI 408 +L P+L+TK++ GLF AGQ+NGTTGYEEAAAQGLVAG+N+AR + + F R SYI Sbjct: 371 TQLSPSLQTKRVKGLFTAGQLNGTTGYEEAAAQGLVAGLNAARLVQGQEQVQFPREGSYI 430 Query: 409 GVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYI 468 G MIDDL SK + EPYR+ TSR+EYR+ LR DNAD RLTP+G +LG I RR + F + Sbjct: 431 GTMIDDLVSKDLHEPYRVLTSRSEYRLILRGDNADRRLTPLGYQLGLIDARRWQLFQRKQ 490 Query: 469 QEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTR---TAYEFLSYPDFSIQNLFSICPDA 525 + L+ L + + ++ ++ K + T + L P +L Sbjct: 491 TALEDEKQRLEKQRLKASDPAAPALEAKTGATIKGSITLADLLRRPGVRSADLIEHGLVD 550 Query: 526 RKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 + + V E +I+ Y+ Y RQ + ++K + +R +P + DY+++ LS E +EKL+ Sbjct: 551 PELALGVREGAEIDIKYSGYLQRQQQQIDQLKRQSQRRLPANLDYANISTLSKEAREKLT 610 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYIK 614 + P N QAS+I G++ A L LL++++ Sbjct: 611 AVGPLNFAQASQIPGVSKADLTALLVWLE 639 >gi|168187284|ref|ZP_02621919.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium botulinum C str. Eklund] gi|169294820|gb|EDS76953.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium botulinum C str. Eklund] Length = 632 Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust. Identities = 263/618 (42%), Positives = 385/618 (62%), Gaps = 13/618 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DV VIG GHAGCEAA +A++G ST + +++ M CNP IGG KGHLVREIDAL Sbjct: 8 FDVAVIGAGHAGCEAALASARIGVSTVVFATDLASVAMMPCNPNIGGTAKGHLVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG D IQ R+LN KGPAV R QAD+ Y M+ + + ENL++ Q E+ Sbjct: 68 GGEMGINIDHTYIQSRMLNTSKGPAVHSLRAQADKGKYAERMKHVLETTENLNLKQAEII 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + E + ++ ++ + + +L TG +L+ I IG + G G +P+N L S Sbjct: 128 KVDIEDGNVKGVLTKNGAYYKVKAAILCTGVYLKSRIIIGDINYEGGPSGLAPANMLSQS 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + R KTGTPAR++ +T+ + K +Q D+ ++PFSFM++ I QI C +T + Sbjct: 188 LIDSGIKITRFKTGTPARINRRTVDFSKMIEQKGDDNIVPFSFMSENIEREQISCYLTYS 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 ET ++++ENI S +Y+G IKS GPRYCPS EDKI+RF E++ HQIF+EPEG NT+ + Sbjct: 248 GDETKKVVLENIDRSPLYNGSIKSVGPRYCPSFEDKIMRFPEKDKHQIFIEPEGENTEEM 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+S++LPE++Q + +R++PGLE ++R YAIEYD I+P +L +LE K I+GLF Sbjct: 308 YVGGMSSSLPEDVQIKMLRSVPGLENAEMMRTAYAIEYDCIDPTQLKISLEFKNINGLFS 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ+NG++GYEEA QGL+AGIN+A K + + R+D+YIGV+IDDL +KG EPYR Sbjct: 368 AGQMNGSSGYEEAGCQGLIAGINAALKLQGKEPLVLKRSDAYIGVLIDDLVTKGTHEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 M TSRAEYR+ LR DNAD RLT +G +G + E R +F K + LK++ +T+ Sbjct: 428 MMTSRAEYRLLLRQDNADLRLTEMGYNIGLVKEDRYIKFIKRKKAIEDEIERLKNIQITN 487 Query: 486 KN--------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 K L+S + K + YE + P+ + + + D + V E++ Sbjct: 488 KQEVNKFLEGLNSAGLK-----KPISLYELIKRPELNYFVVKDLDKDREELPRDVQEQVN 542 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I S Y Y +Q+ + ++ K E RLIPK+FDY + L E +KL +KP N+ QAS+ Sbjct: 543 IISKYEGYIQKQLEQVEQFKKLENRLIPKEFDYKLVKGLRTEAIQKLDKIKPVNIGQASR 602 Query: 598 IEGMTPAALNLLLIYIKK 615 I G++PA +++LLI +++ Sbjct: 603 ISGVSPADISVLLIVLEQ 620 >gi|300774539|ref|ZP_07084402.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Chryseobacterium gleum ATCC 35910] gi|300506354|gb|EFK37489.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Chryseobacterium gleum ATCC 35910] Length = 620 Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust. Identities = 281/618 (45%), Positives = 384/618 (62%), Gaps = 5/618 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 MI+ YDVIV+G GHAGCEAAA AA LG+ T LIT TIG MSCNPA+GG+ KG +VR Sbjct: 1 MISEIYDVIVVGAGHAGCEAAAAAANLGSKTLLITMNMQTIGQMSCNPAMGGIAKGQIVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDA+ G G VAD + IQF++LN+ KGPA+ PRTQ DR L+ + + + NLD Sbjct: 61 EIDAMGGYSGIVADKSAIQFKMLNLSKGPAMWSPRTQNDRMLFAEEWRLALENTPNLDFF 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E N ++ +V I+ +VVLT GTFL G+IH+G ++ GRMG+ + Sbjct: 121 QDMVKQLIIENNKVTGVVTSLGIEIKGRSVVLTNGTFLNGLIHVGDKQLGGGRMGEPRAF 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 + + F+ GR+KTGTP R+DG+++ + K E+Q D+ FS++ +Q+ C Sbjct: 181 GITEQLVTLGFEAGRMKTGTPPRVDGRSLDYSKMEEQKGDQNPQKFSYLDTPKLTKQLSC 240 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 I TN H I+ E S +++G I+S GPRYCPSIEDKI RF ERN HQ+F+EPEG Sbjct: 241 HIVYTNETVHDILREGFDRSPMFNGTIQSLGPRYCPSIEDKINRFAERNRHQLFVEPEGW 300 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T +Y NG S++LPE++Q + ++ IPG E V + RPGYAIEYDY P +L TLETK I Sbjct: 301 KTVEIYVNGFSSSLPEDVQIKAMKHIPGFENVKVFRPGYAIEYDYFPPTQLKHTLETKII 360 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 L+ AGQINGTTGYEEAA QGL+AGIN+ K ++ D +R ++YIGV+IDDL +KG Sbjct: 361 DNLYFAGQINGTTGYEEAAGQGLIAGINAHNKVHEKDEFILNRDEAYIGVLIDDLITKGT 420 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT LG E R +R + E L L+ Sbjct: 421 EEPYRMFTSRAEYRLLLRQDNADIRLTEKAFNLGLAKEDRLRRVETKVSESQSLEEFLRE 480 Query: 481 LVLTSK--NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS---ICPDARKFSSLVIER 535 L N SI + A + L+ P+ +++ L I + ++S V E+ Sbjct: 481 TSLKPGIINPVLESIESSPVDQAYRAAQILTRPNMTLEKLDEIDFIKEVSEQYSDEVREQ 540 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 +I Y Y ++ ++ E IP+DFDYS L +LS E K+K+S ++P + QA Sbjct: 541 AEINIKYKGYIEKEKENVAKLNRLENIKIPEDFDYSKLSSLSAEAKQKMSNVRPKTIAQA 600 Query: 596 SKIEGMTPAALNLLLIYI 613 +I G++PA +N+LL+Y+ Sbjct: 601 GRISGVSPADINVLLVYL 618 >gi|325970664|ref|YP_004246855.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Spirochaeta sp. Buddy] gi|324025902|gb|ADY12661.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Spirochaeta sp. Buddy] Length = 603 Score = 509 bits (1312), Expect = e-142, Method: Compositional matrix adjust. Identities = 254/612 (41%), Positives = 381/612 (62%), Gaps = 17/612 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YD IV+GGGHAG EA +++G ST LIT TIG +SCNPAIGGL KG+LVRE+DA Sbjct: 2 DYDAIVVGGGHAGIEAGLALSRIGFSTLLITQNLDTIGKLSCNPAIGGLSKGNLVREVDA 61 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M + D + IQ+R+LN ++GPAV+ PR QAD+ Y + + ++ NL + V Sbjct: 62 LGGEMAHLIDHSMIQYRILNRRRGPAVQAPRAQADKFTYARLAKETLEAEHNLALFMDTV 121 Query: 125 AG-FNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 + N + +V I C +VLTTGTF+ G I IG+ GR+ + + L Sbjct: 122 VDILLDDHNRLVGVVTDRRHTITCKVMVLTTGTFMEGRIFIGEYDASNGRLDEPAAIGLG 181 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 ++ + F GR+KTGTPAR+ ++ +D E Q +E ++PFSF + + + C IT Sbjct: 182 SALRRKGFPVGRMKTGTPARVRRSSLDFDTMEVQDGEEHMMPFSFDYNSVDRPALPCYIT 241 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH+II +NI S +Y G I GPRYCPSIEDK+VRF +R+ HQIF+EPEG+ T+ Sbjct: 242 WTNENTHQIIRQNIHRSPLYGGKIVGKGPRYCPSIEDKVVRFPDRDRHQIFVEPEGVGTE 301 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y NGIS++LPE++QH FI +I GLE I+RP YA+EYD+I+P+ LFP+LE+K + L Sbjct: 302 EMYLNGISSSLPEDVQHAFIHSIAGLEHAQIMRPAYAVEYDFIDPQALFPSLESKLVENL 361 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F+AGQ NGT+GYEEAA QGL+AGIN+A+K + SR ++Y GV+IDDL + G EP Sbjct: 362 FIAGQTNGTSGYEEAACQGLMAGINAAQKLKGEKPLVLSRNEAYTGVLIDDLVTMGTQEP 421 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR++LR D+ D RLT G +G + +R + + + + ++ LL++ L Sbjct: 422 YRMFTSRAEYRLNLRHDSCDQRLTAKGFAVGLQKQENLERLQEKLAKMDAVKDLLRARRL 481 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 K +A + L PD ++ +L + P+ + + ++ +++++ Y Sbjct: 482 QEK----------------SALQALRMPDLTMSDLVAYIPELKAYEEPILYQVELDVKYE 525 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y RQ + + E LI ++ +Y ++ LS E KEKL ++P ++ QA++I G+ Sbjct: 526 GYINRQDRQVSRFEKLESLLIDENLNYDAIDGLSAEGKEKLKKVRPLSVGQATRINGVRN 585 Query: 604 AALNLLLIYIKK 615 + +L++++ + Sbjct: 586 GDIAVLIVHLDR 597 >gi|254851887|ref|ZP_05241235.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes FSL R2-503] gi|254992367|ref|ZP_05274557.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes FSL J2-064] gi|300763432|ref|ZP_07073430.1| glucose-inhibited division protein A [Listeria monocytogenes FSL N1-017] gi|258605182|gb|EEW17790.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes FSL R2-503] gi|300515709|gb|EFK42758.1| glucose-inhibited division protein A [Listeria monocytogenes FSL N1-017] Length = 629 Score = 509 bits (1312), Expect = e-142, Method: Compositional matrix adjust. Identities = 265/619 (42%), Positives = 378/619 (61%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+G GHAG EA + ++GA T ++T + M CNP++GG KG +VREIDA Sbjct: 8 TFDVIVVGAGHAGVEAGLASGRMGAKTLMLTINLDMVAFMPCNPSVGGPAKGVVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ M+ I +EN+ + QG V Sbjct: 68 LGGEMGRNTDKTYIQMRMLNTGKGPAVRALRAQADKWDYQHEMKHTIEKEENITLRQGLV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ ++ TVV+TTGTF RG I +G+L+ +G PS L Sbjct: 128 DRLVIEDGVCKGVITNSGAIYYAKTVVITTGTFSRGEIIVGELRYSSGPNNQQPSVKLSE 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F R KTGTP R+ TI + KTE+Q D+ FSF T ++ Q+ C +T Sbjct: 188 HLEELGFGLRRFKTGTPPRVKSSTIDYSKTEEQPGDDHPRAFSFDTVEMLLDQLPCWLTY 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +++ K G RYCPSIEDKIVRF ++ HQIFLEPEG NT+ Sbjct: 248 TNETTHEIIQANLHRSPMFTATKKGTGARYCPSIEDKIVRFSDKPRHQIFLEPEGKNTEE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPEE+Q + +RTIPGLE V ++R GYAIEYD + P +L+P+LETK + GLF Sbjct: 308 VYVQGLSTSLPEEVQREMLRTIPGLENVEMMRVGYAIEYDAVMPDQLWPSLETKLVEGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+ARK + + + R +YIGV+IDDL +KG EPY Sbjct: 368 TAGQINGTSGYEEAAGQGLMAGINAARKVFEKEPVILGRDQAYIGVLIDDLVTKGTEEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF-----AKYIQEYNFLRSLLK 479 R+ TSRAEYR+ LR DNAD RLT IG ++G I + R +RF A ++ ++ +K Sbjct: 428 RLLTSRAEYRLLLRHDNADLRLTEIGHEIGLISDERYERFLAKQSAIEAEKERLQKTRIK 487 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 L +DG A + L P+ + + I + + E+++I+ Sbjct: 488 PTAEVQAMLKEIGSGELKDGI--LAADLLRRPEITYDKIAQIVSRETFVTDEIAEQVEIQ 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + ++ +++K E + IP++ DY ++ L+ E EKL ++P ++ QAS+I Sbjct: 546 IKYEGYIQKSNLQVEKMKRMEDKKIPENIDYDAISGLATEALEKLKKIEPLSIAQASRIS 605 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 606 GVNPADISILLVYIEQGKI 624 >gi|317010491|gb|ADU84238.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Helicobacter pylori SouthAfrica7] Length = 621 Score = 509 bits (1312), Expect = e-142, Method: Compositional matrix adjust. Identities = 282/627 (44%), Positives = 377/627 (60%), Gaps = 16/627 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M+ S D++V+GGGHAG EA+ +AAK+GA LIT TIG SCNPAIGGLGKGHL + Sbjct: 1 MVKES-DILVVGGGHAGIEASLIAAKMGARVHLITMLIDTIGLASCNPAIGGLGKGHLTK 59 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+D L G MG + D +G+Q+RVLN KGPAVRG R Q D + YR+ + +L+ NL V Sbjct: 60 EVDVLGGAMGIITDHSGLQYRVLNASKGPAVRGTRAQIDMDTYRIFARNLVLNTPNLSVS 119 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q E + + + N+ R V++TTGTFL+GV+HIG+ + GR G++ SN Sbjct: 120 QEMTESLILENDEVVGVTTNINNTYRAKKVIITTGTFLKGVVHIGEHQNQNGRFGENASN 179 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 SL + + F RLKTGT R+ G +I ++ E+ F D FS+ T Q+ C Sbjct: 180 SLALNLRELGFKVERLKTGTCPRVAGNSIDFEGLEEHFGDANPPYFSYKTKDFNPTQLSC 239 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN TH+II +N + ++SG I+ GPRYCPSIEDKI RF E+ HQ+FLEP+ + Sbjct: 240 FITYTNPITHQIIRDNFHRAPLFSGQIEGIGPRYCPSIEDKINRFSEKERHQLFLEPQTI 299 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + Y NG+ST+LP ++Q + I +I GLE I R GYAIEYD+I P EL LETKKI Sbjct: 300 HKSEYYINGLSTSLPLDVQEKVIHSIKGLENALITRYGYAIEYDFIQPTELTHALETKKI 359 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GL+LAGQINGTTGYEEAAAQGL+AGIN+ D R ++YIGV+IDDL +KG Sbjct: 360 KGLYLAGQINGTTGYEEAAAQGLMAGINAVLALKNRDPFILKRNEAYIGVLIDDLVTKGT 419 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DN RL +LG + + K K QE LK Sbjct: 420 NEPYRMFTSRAEYRLLLREDNTLFRLGEHAYRLGLMEQDFYKELEKDKQEIQENLKRLKE 479 Query: 481 LVLTS--------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV 532 VLT L I+ K DG + L+ F+++ + S + V Sbjct: 480 CVLTPSKEVLKRLNELGENPINDKMDGVS-----LLARDSFNLEKMRSFFSFLAPLNERV 534 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 +E+++IE Y Y +Q ++ K IPKDF + +P LS E EKL +P +L Sbjct: 535 LEQIKIECKYNIYIEKQHENIAKMDSMLKVSIPKDFVFKGIPGLSLEAVEKLEKFRPKSL 594 Query: 593 LQASKIEGMTPAALNLLLIYI--KKNT 617 +AS+I G+TPA L++L +YI +KN+ Sbjct: 595 FEASEISGITPANLDVLHLYIHLRKNS 621 >gi|224498351|ref|ZP_03666700.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes Finland 1988] Length = 628 Score = 509 bits (1312), Expect = e-142, Method: Compositional matrix adjust. Identities = 264/619 (42%), Positives = 378/619 (61%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+G GHAG EA + ++GA T ++T + M CNP++GG KG +VREIDA Sbjct: 8 TFDVIVVGAGHAGVEAGLASGRMGAKTLMLTINLDMVAFMPCNPSVGGPAKGVVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ M+ I +EN+ + QG V Sbjct: 68 LGGEMGRNTDKTYIQMRMLNTGKGPAVRALRAQADKWDYQHEMKHTIEKEENITLRQGLV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ ++ TVV+TTGTF RG I +G+L+ +G PS L Sbjct: 128 DRLVIEDGVCKGVITNSGAIYYAKTVVITTGTFSRGEIIVGELRYSSGPNNQQPSVKLSE 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F+ R KTGTP R+ TI + KTE+Q D+ FSF T + Q+ C +T Sbjct: 188 HLEELGFELRRFKTGTPPRVKSSTIDYSKTEEQPGDDHPRAFSFDTVDMMLDQLPCWLTY 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +++ K G RYCPSIEDKIVRF ++ HQIFLEPEG NT+ Sbjct: 248 TNETTHEIIQANLHRSPMFTATKKGTGARYCPSIEDKIVRFSDKPRHQIFLEPEGKNTEE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPEE+Q + +R+IPGLE V ++R GYAIEYD + P +L+P+LETK + GLF Sbjct: 308 VYVQGLSTSLPEEVQREMLRSIPGLENVEMMRVGYAIEYDAVMPDQLWPSLETKLVEGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+ARK + + + R +YIGV+IDDL +KG EPY Sbjct: 368 TAGQINGTSGYEEAAGQGLMAGINAARKVFEKEPVILGRDQAYIGVLIDDLVTKGTEEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF-----AKYIQEYNFLRSLLK 479 R+ TSRAEYR+ LR DNAD RLT IG ++G I + R +RF A ++ ++ +K Sbjct: 428 RLLTSRAEYRLLLRHDNADLRLTEIGHEIGLISDERYERFLAKQSAIEAEKERLQKTRIK 487 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 L +DG A + L P+ + + I + + E+++I+ Sbjct: 488 PTAEVQAMLKEIGSGELKDGI--LAADLLRRPEITYDKIAQIVSRETFVTDEIAEQVEIQ 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + ++ +++K E + IP++ DY ++ L+ E EKL ++P ++ QAS+I Sbjct: 546 VKYEGYIQKSNLQVEKMKRMEDKKIPENIDYDAISGLATEALEKLKKIEPLSIAQASRIS 605 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 606 GVNPADISILLVYIEQGKI 624 >gi|310793204|gb|EFQ28665.1| glucose inhibited division protein A [Glomerella graminicola M1.001] Length = 690 Score = 509 bits (1312), Expect = e-142, Method: Compositional matrix adjust. Identities = 260/594 (43%), Positives = 364/594 (61%), Gaps = 12/594 (2%) Query: 33 LITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVR 92 L+T K +G+ SCNP+ GG+GKG ++REIDALDGL GRV D AG+QFRVLN KGPAV Sbjct: 70 LVTPKIENLGTCSCNPSFGGVGKGIILREIDALDGLAGRVIDKAGVQFRVLNRAKGPAVW 129 Query: 93 GPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNI---------ISSIVMQDNS 143 GPR Q DR+LY+ M+ E+ + NL ++ G V+ T N I+ + ++ Sbjct: 130 GPRAQIDRKLYQKHMREELETYPNLSIVLGSVSDIVTSANPDTTGSAPSKITGVRLESGE 189 Query: 144 MIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPAR 203 ++ S V++TTGTFL IHIG PAGR+G+ S L S F GRLKTGTP R Sbjct: 190 VLPTSAVIITTGTFLSAEIHIGMKAYPAGRIGEDASFGLSKSLKDAGFRLGRLKTGTPPR 249 Query: 204 LDGKTIIWDKTEKQFADERLIPFSFMTDKIT-NRQIECGITRTNLETHRIIMENIKHSAI 262 + +I + E+Q D +PFSF+ +++ Q+ C ++ TN +TH I+ +N++ + Sbjct: 250 IAKDSIDYTHLERQPGDNPPMPFSFLNERVAVEEQMSCHVSYTNEKTHAIVRDNLEKTIH 309 Query: 263 YSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQF 322 IK GPRYCPS+E KIVRF +++ H ++LEPEG ++D+VYPNG+S +P E Q Q Sbjct: 310 IRETIK--GPRYCPSLEAKIVRFSDKDRHIVWLEPEGFDSDLVYPNGLSMTVPPEAQEQI 367 Query: 323 IRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQG 382 +R+IPGLE + + GY +EYDYI+P+ L TLETK I+GLFLAGQINGTTGYEEAA QG Sbjct: 368 LRSIPGLENCVMTQVGYGVEYDYIDPRSLKATLETKNIAGLFLAGQINGTTGYEEAAGQG 427 Query: 383 LVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNA 442 ++AGIN+ R + L SR D YIG+MIDDL +KGV EPYRMFT+R+EYR++ R DNA Sbjct: 428 IIAGINAGRSALGLAPAAVSRADGYIGIMIDDLITKGVTEPYRMFTTRSEYRLTSRADNA 487 Query: 443 DNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTR 502 D RLT G K G + + R F+ Q+ + L +LL S +S K+D R Sbjct: 488 DLRLTEQGRKWGVVSDERWAAFSDEKQQISDLMALLSSTSKSSPEWLKQGFQVKEDATRR 547 Query: 503 TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKR 562 A + L + ++ + + P F + R+ IE++YA + RQ+ E K +E Sbjct: 548 DATDMLRLRNITMDQVAAAVPGVEAFPERIRSRVHIEATYAPFIKRQLAERKVFARDESL 607 Query: 563 LIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKN 616 +P DY +P L+ K L P L QA ++EG+TP+ LL Y+++ Sbjct: 608 RLPAWIDYDKVPGLAMAEKAVLKATMPETLAQARRLEGITPSGCVRLLGYVQRQ 661 >gi|159904343|ref|YP_001551687.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prochlorococcus marinus str. MIT 9211] gi|159889519|gb|ABX09733.1| Glucose inhibited division protein A [Prochlorococcus marinus str. MIT 9211] Length = 657 Score = 509 bits (1312), Expect = e-142, Method: Compositional matrix adjust. Identities = 285/629 (45%), Positives = 382/629 (60%), Gaps = 23/629 (3%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 S+DVIV+GGGHAGCEAA AKLG STAL T I CNPA+GG K LV E+DA Sbjct: 10 SFDVIVVGGGHAGCEAAITTAKLGFSTALFTLNLDRIAWQPCNPAVGGPAKSQLVHEVDA 69 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G++GR+AD IQ R+LN +GPAV R Q D+ Y M + + + NL + + V Sbjct: 70 LGGVIGRLADTTAIQKRILNASRGPAVWALRAQTDKRQYVKQMLQLLQNTPNLHLREAMV 129 Query: 125 AGFNTEKN-----------IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGR 173 G + N I I S+ V+LTTGTFLRG I IG + AGR Sbjct: 130 TGLEVDPNNSKVSNENHTGWIKGIKTYFGSIYLAKAVILTTGTFLRGRIWIGNQSMAAGR 189 Query: 174 MGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSF-MTDK 232 G+ P+ L + + F T RLKTGTPAR+D ++I E+Q +D FSF T Sbjct: 190 AGEQPAEGLTEALQELGFQTDRLKTGTPARIDRRSINLHALEEQKSDAANRFFSFDPTAW 249 Query: 233 ITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQ 292 + +QI C ITRT TH+++ +N++H+ IY G I S GPRYCPSIEDKIVRF ++ HQ Sbjct: 250 KSGKQISCHITRTTTATHQLVKDNLQHTPIYGGFIDSKGPRYCPSIEDKIVRFSDKESHQ 309 Query: 293 IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF 352 IFLEPEGL+T +Y G ST LPE++Q + ++T+PGLEK ++RP YA+EYDYI +L Sbjct: 310 IFLEPEGLDTPEIYVQGFSTGLPEKLQLKLLQTLPGLEKCIMLRPAYAVEYDYIPATQLL 369 Query: 353 PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMI 412 P+LETKKI GLF AGQ+NGTTGYEEAAAQGLVAGIN+ R + + + F R +SYIG MI Sbjct: 370 PSLETKKIKGLFSAGQLNGTTGYEEAAAQGLVAGINATRLIQQKEALHFPREESYIGTMI 429 Query: 413 DDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYN 472 DDL K + EPYR+ TSR+EYR+ LR DNAD RLTP+G KLG I +RR F ++N Sbjct: 430 DDLVHKDLREPYRVLTSRSEYRLLLRGDNADRRLTPLGHKLGLIDQRRWDIFKA---KHN 486 Query: 473 FLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYE-------FLSYPDFSIQNLFSICPDA 525 L + K + T + +S SI+ + + +T A + L P + L Sbjct: 487 ALNN-EKIRLETQRVKASDSIALELEKETGAAIKGSISLANLLRRPGTHMSTLLRYQLIN 545 Query: 526 RKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 V E ++I+ Y+ Y RQ + +I+ + K+ IP + +Y S+ LS E +EKL+ Sbjct: 546 NDIPLDVREGVEIDIKYSGYLERQKAQVDQIQKQSKKPIPTEINYESITTLSKEAREKLT 605 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYIK 614 I +P N +A I G++ A L LL+++K Sbjct: 606 IRRPKNFGEAGLIPGVSKADLTALLVWLK 634 >gi|322515818|ref|ZP_08068762.1| glucose inhibited division protein A [Streptococcus vestibularis ATCC 49124] gi|322125704|gb|EFX97026.1| glucose inhibited division protein A [Streptococcus vestibularis ATCC 49124] Length = 633 Score = 509 bits (1311), Expect = e-142, Method: Compositional matrix adjust. Identities = 270/623 (43%), Positives = 384/623 (61%), Gaps = 12/623 (1%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 + ++DVIV+G GHAG EA+ AA++G L T + M CNP+IGG KG +VREI Sbjct: 6 DENFDVIVVGAGHAGVEASLAAARMGCKVLLATINLEMLAFMPCNPSIGGSAKGIVVREI 65 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G MG+ D IQ ++LN KGPAVR R QAD+ LY + M+ + QENL + Q Sbjct: 66 DALGGEMGKNIDKTYIQMKMLNTGKGPAVRALRAQADKALYAMTMKHTVERQENLTLRQS 125 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 V E + + N VV+TTGT LRG I +G+LK +G S +L Sbjct: 126 MVDEILVEDGKVVGVRTATNQKYGAKAVVVTTGTALRGEIILGELKYSSGPNNSLASVTL 185 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIEC 240 ++ + + GR KTGTP R+ +I +++TE Q DE+ FSF++ + QI C Sbjct: 186 ADNLKELGLEIGRFKTGTPPRVKASSINYEETEIQPGDEKPNHFSFLSKDEDYLQDQIPC 245 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +T TN E+H II N+ + ++SG +K GPRYCPSIEDKIVRF ++N HQ+FLEPEG Sbjct: 246 WLTYTNQESHDIINNNLHRAPMFSGIVKGVGPRYCPSIEDKIVRFADKNRHQLFLEPEGR 305 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T+ VY G+ST+LPE++Q + I +I GLEK ++R GYAIEYD + P +L TLETK I Sbjct: 306 ETEEVYVQGLSTSLPEDVQKELIHSIKGLEKAEMMRTGYAIEYDIVLPHQLRATLETKLI 365 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 SGLF AGQ NGT+GYEEAA QGLVAGIN+A K + R+D+YIGVMIDDL +KG Sbjct: 366 SGLFTAGQTNGTSGYEEAAGQGLVAGINAALKVQGKPELILKRSDAYIGVMIDDLVTKGT 425 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYN-----FLR 475 LEPYR+ TSRAEYR+ LR DNAD RLTPIG ++G + + R F +++ + Sbjct: 426 LEPYRLLTSRAEYRLILRHDNADMRLTPIGREVGLVDDERWSIFEIKKNQFDSELTRLSK 485 Query: 476 SLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYP--DFSIQNLFSICPDARKFSSLVI 533 LK + T++ + ++ FK TA EF+ P D++ F + P A + VI Sbjct: 486 EKLKPIKETNEKIQ--ALGFKPLTDAMTAKEFMRRPEIDYATATQF-VGPAAEDLDAKVI 542 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E L+ E Y Y + + + ++K E++ IPK+ D+ ++ +++ E ++K + P + Sbjct: 543 ELLETEIKYEGYINKALDQVAKMKRMEEKKIPKNIDWDAIDSIATEARQKFKKINPETIG 602 Query: 594 QASKIEGMTPAALNLLLIYIKKN 616 QAS+I G+ PA +++L++Y++ N Sbjct: 603 QASRISGVNPADISILMVYLEGN 625 >gi|148240756|ref|YP_001226143.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Synechococcus sp. WH 7803] gi|205831564|sp|A5GPI1|MNMG_SYNPW RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|147849295|emb|CAK24846.1| Glucose inhibited division protein A [Synechococcus sp. WH 7803] Length = 659 Score = 509 bits (1311), Expect = e-142, Method: Compositional matrix adjust. Identities = 268/629 (42%), Positives = 378/629 (60%), Gaps = 20/629 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAGCEAA +A+LG +TAL T I CNPA+GG K LV E+DAL Sbjct: 11 FDVIVVGGGHAGCEAAITSARLGLNTALFTLNLDRIAWQPCNPAVGGPAKSQLVHEVDAL 70 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G++GR+ADA IQ R+LN +GPAV R Q D+ Y M + + NL + + V Sbjct: 71 GGVIGRLADATAIQKRILNASRGPAVWALRAQTDKRQYSRQMLQLLQHTPNLALREAMVT 130 Query: 126 GFNTEKNI----------------ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKI 169 G + + I+ + S+ VVLT GTFL G I +G + Sbjct: 131 GLEIDGDPAGGGEHWDPSQGPAARITGVRTYFGSLYGAKAVVLTAGTFLGGRIWVGHQSM 190 Query: 170 PAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM 229 AGR G+ + L + + F T RLKTGTPAR+D ++I D+ E+Q +D FSF Sbjct: 191 AAGRAGEQAAEGLTEALQQLGFHTDRLKTGTPARVDRRSIALDQLEEQPSDAADRFFSFD 250 Query: 230 TDKITN-RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGER 288 ++ Q+ C ITRT TH++I +N+ +AIY G I S GPRYCPSIEDKIVRF ++ Sbjct: 251 PAAWSSGEQMSCHITRTTAATHQLIKDNLHLTAIYGGVIDSKGPRYCPSIEDKIVRFADK 310 Query: 289 NGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINP 348 + HQIFLEPEG +T +Y G ST LPE IQ Q +R++PGLE+ ++RP Y+++YDY+ Sbjct: 311 DSHQIFLEPEGRDTPEIYVQGFSTGLPEPIQLQLLRSLPGLEQAVMLRPAYSVDYDYLPA 370 Query: 349 KELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYI 408 +L P+LETK++ GLF AGQ+NGTTGYEEAAAQGLVAG+N+AR+ + + F R SYI Sbjct: 371 TQLLPSLETKRVQGLFSAGQLNGTTGYEEAAAQGLVAGLNAARRIRAEEAVHFPREGSYI 430 Query: 409 GVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYI 468 G MIDDL SK + EPYR+ TSR+EYR+ LR DNAD RLTP+G +LG I +RR + F + Sbjct: 431 GTMIDDLVSKDLREPYRVLTSRSEYRLVLRGDNADRRLTPLGRELGLIDDRRWRLFEDKL 490 Query: 469 QEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTR---TAYEFLSYPDFSIQNLFSICPDA 525 Q + L+ L + ++ ++ + + T + L P +L Sbjct: 491 QAMEAEKQRLEQQRLKVSDPAAPAVEQETGAPIKGSITLADLLRRPGMHAADLVRHGLAD 550 Query: 526 RKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 V E +I+ Y+ Y RQ + ++K + +R +P+ DY+S+ LS E +EKL+ Sbjct: 551 AGLPLPVREGAEIDIKYSGYLARQQQQIDQVKRQGRRKLPETIDYASISTLSREAREKLT 610 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYIK 614 ++P L QAS+I G++ A L LL++++ Sbjct: 611 AVRPLTLGQASQIPGVSQADLTSLLMWLE 639 >gi|21672295|ref|NP_660362.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|3913737|sp|O51879|MNMG_BUCAP RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|2827025|gb|AAC38117.1| putative chromosome replication protein [Buchnera aphidicola] gi|21622893|gb|AAM67573.1| glucose inhibited division protein A [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 631 Score = 509 bits (1311), Expect = e-142, Method: Compositional matrix adjust. Identities = 298/625 (47%), Positives = 401/625 (64%), Gaps = 13/625 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 +++DVIVIGGGHAG EAAA +A++G T L+T K + IG +SCNPAIGG+GK HLV+EID Sbjct: 7 KNFDVIVIGGGHAGTEAAAASARVGCKTLLLTQKITDIGVLSCNPAIGGIGKSHLVKEID 66 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL GLM R D +GIQFRVLN KKGPAVR R QADR LY +++ + + NL +++ E Sbjct: 67 ALGGLMARAIDYSGIQFRVLNSKKGPAVRSTRAQADRILYCQNIKKLLKKELNLLILETE 126 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + + ++ Q N +VVL+TGTFL G IHIG AGR G+ S L Sbjct: 127 VKDLIVKNYQVIGVLTQSNMSFYSRSVVLSTGTFLGGKIHIGLESYSAGRKGEKASIDLA 186 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR--QIECG 241 F RLKTGTP R+D TI ++ Q D FSFM D I+N QI C Sbjct: 187 LRLRDLPFRVDRLKTGTPPRIDINTINFENLFVQHGDVPTPVFSFMGD-ISNHPLQIPCF 245 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN +TH II +N+ S +Y+G IK GPRYCPSIEDKIVRF +R HQIFLEPEGL Sbjct: 246 LTHTNEKTHEIIRKNLHKSPLYTGIIKGVGPRYCPSIEDKIVRFPDRKSHQIFLEPEGLT 305 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 + +YPNGIST+LP ++Q + + ++ GLEK II PGYA+EYD+ +PK+L TLE+K I Sbjct: 306 SIEIYPNGISTSLPLDVQKEIVSSVKGLEKSKIITPGYAVEYDFFDPKDLNLTLESKWIK 365 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDC-ICFSRTD-SYIGVMIDDLTSKG 419 GLFLAGQINGTTGYEEAA+QGL+AG+N+A + DC F R D +Y+GV+IDDLT++G Sbjct: 366 GLFLAGQINGTTGYEEAASQGLLAGLNAALSAK--DCKQWFPRRDQAYLGVLIDDLTTQG 423 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSR+EYR++LR DNAD RLT I KLG + R R+ + + + ++ LK Sbjct: 424 ANEPYRMFTSRSEYRLTLREDNADLRLTEIAYKLGLVDNPRWIRYNEKVLNISNEKNRLK 483 Query: 480 SLVLTSKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VIER 535 + + K+ ST ++ + K L P+ + +NL + S L + Sbjct: 484 KIKIYPKSSDSTILNQLFNIVLTKEINILNLLKRPEITYENLKYLKNFKVGISDLEAAGQ 543 Query: 536 LQIESSYAAYTGRQMIEA-KEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 ++ E Y Y RQ+ E + +K E L+P +DY+ + LS+E KL+ KP ++ Q Sbjct: 544 IENEIKYEGYIKRQLEEINRHLKNENTPLLPT-YDYNKIKGLSHEAVLKLNDYKPVSVGQ 602 Query: 595 ASKIEGMTPAALNLLLIYIKKNTVK 619 AS+I G+TPA +++LLI++KK K Sbjct: 603 ASRISGITPATISILLIHLKKEYYK 627 >gi|284928804|ref|YP_003421326.1| glucose-inhibited division protein A [cyanobacterium UCYN-A] gi|284809263|gb|ADB94968.1| glucose-inhibited division protein A [cyanobacterium UCYN-A] Length = 633 Score = 509 bits (1311), Expect = e-142, Method: Compositional matrix adjust. Identities = 274/616 (44%), Positives = 372/616 (60%), Gaps = 9/616 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+G GH+GCEAA ++LG T ++T + CNPAIGG K L E+DAL Sbjct: 13 FDVIVVGAGHSGCEAALATSRLGCKTLMLTLNLDRVAWQPCNPAIGGPAKSQLAHEVDAL 72 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G +G+V D +Q R+LN +GPAV R Q D+ Y AM+ I +QENL++ +G V Sbjct: 73 GGEIGKVTDLTYLQKRILNASRGPAVWALRAQVDKREYSAAMKAIIENQENLNIREGMVT 132 Query: 126 GFNTEKNI-ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 +N I + S V+L TGTFL G I IG + AGR G+ PS +L N Sbjct: 133 DLVLGRNDEIRGVQTYFGSCFAAKAVILATGTFLGGQIWIGDKSMDAGRAGEFPSINLTN 192 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGIT 243 + + F+T RLKTGTPAR+D +++ + + E Q D+ L FSF + I Q+ C +T Sbjct: 193 TLKQLGFETERLKTGTPARIDKRSVDYSQLEPQPPDKNLKWFSFDPNFWIEKEQMNCYLT 252 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 RT ETH++I +N+ S IY G +KS GPRYCPSIEDKIVRF ++N HQIF+EPEG T Sbjct: 253 RTTPETHKLIQDNLHLSPIYGGFVKSKGPRYCPSIEDKIVRFADKNSHQIFIEPEGRETP 312 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G ST LPE IQ ++T+PGLEK ++RP YA+EYD++ + PTL TKKI GL Sbjct: 313 ELYVQGFSTGLPENIQSAMLKTLPGLEKCVMLRPAYAVEYDFLPATQCKPTLMTKKIEGL 372 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQG+VAGIN+A+ + I FSR DSYIG +IDDL +K + EP Sbjct: 373 FCAGQINGTTGYEEAAAQGIVAGINAAKFIKNEEMIIFSREDSYIGTLIDDLCTKDIREP 432 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRM TSR+EYR+ LR DNAD RLTP+G ++G I R F K ++ N L ++ + Sbjct: 433 YRMLTSRSEYRLILRSDNADERLTPLGRRIGLIDNYRWHLFQK--KQKNILEEKIRLSKV 490 Query: 484 TSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 K I +D + T + L P +NL + E ++I Sbjct: 491 RIKEKDEIGIRLIKDTQQNIKGAITLADLLKRPKIHYKNLEQYGLGNNNLTVGEKEGVEI 550 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 Y+ Y RQ + +++K R +P D DY ++ LS E +EKL+ + P + QAS+I Sbjct: 551 NIKYSGYLKRQQNQLEQVKRYSDRNLPTDIDYMNIETLSMEAREKLTKVSPLTIGQASRI 610 Query: 599 EGMTPAALNLLLIYIK 614 G++PA N LLIY++ Sbjct: 611 GGVSPADTNALLIYLE 626 >gi|256370606|ref|YP_003108431.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Candidatus Sulcia muelleri SMDSEM] gi|256009398|gb|ACU52758.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Candidatus Sulcia muelleri SMDSEM] Length = 622 Score = 509 bits (1311), Expect = e-142, Method: Compositional matrix adjust. Identities = 276/626 (44%), Positives = 390/626 (62%), Gaps = 15/626 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M + YDVIV+GGGH+G EAA A+ LG+ T LIT I MSCNPA+GG+ KG +++ Sbjct: 1 MFDHKYDVIVVGGGHSGSEAALAASNLGSKTLLITTNIYNIAQMSCNPAMGGIAKGQIIK 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G G + D + IQFR+LN KGPA+ PR Q DR + + + NL++ Sbjct: 61 EIDALGGYSGIITDKSMIQFRMLNKSKGPAMWSPRAQCDRLKFSKEWRLILKKNYNLNLY 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V + N + + I+ +V+LT GTFL G+IHIGK + GR+ ++ Sbjct: 121 QDTVIDLIIKNNKVIGVKTILGITIQSKSVILTNGTFLNGIIHIGKKQKSGGRIYENSVK 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR--QI 238 L +F +GR+KTGT RLDGK++ + K +Q D + PFSF++ K R Q Sbjct: 181 GLTEKLKQFGLISGRMKTGTSPRLDGKSLDYSKMIEQLGDSPIEPFSFLSKKKRMRIKQK 240 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 +C +T TNLETH+++ + S I++G IK GPRYCPSIE+KI RF ++ HQIF+EPE Sbjct: 241 KCYLTYTNLETHKLLRDKFNLSPIFNGHIKCVGPRYCPSIEEKIYRFSNKDNHQIFVEPE 300 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 G NT VY NG ST++PEE+Q++ + TIPG EK ++RPGYAIEYDY P +L LE+K Sbjct: 301 GWNTQEVYINGFSTSMPEEVQYKALITIPGFEKAKMVRPGYAIEYDYFYPTQLKINLESK 360 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 KI LF AGQINGTTGYEEAAAQGL+AGIN+ K N+ D + R ++YIGV+IDDL K Sbjct: 361 KIENLFFAGQINGTTGYEEAAAQGLIAGINANLKINEKDPLILKRNEAYIGVLIDDLIYK 420 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFA---KYIQE-YNFL 474 G EPYRMFTSRAEYRI LR DNAD RLTP+G KLG + R K+ K++++ ++F Sbjct: 421 GTEEPYRMFTSRAEYRILLRQDNADERLTPMGEKLGLVNYERIKKLELKNKHLKKCFSFF 480 Query: 475 RSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQ-----NLFSICPDARKFS 529 + L +K L S K++ K +FLS P+ SI+ +L K + Sbjct: 481 KRKTIKFELANKFLKK-SFLIKENIKLG---DFLSRPEISIEEIKKLSLVKNFLKKNKIN 536 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 +++ + + Y Y ++ K++ E IP +F+Y + +LS E KEKL KP Sbjct: 537 KKILDLISLRIKYKGYFKKEEENVKKMSKLENLKIPINFNYKKIKSLSIEAKEKLINYKP 596 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKK 615 ++ +A KI G++P+ +++L+++++K Sbjct: 597 NSIGEALKISGVSPSDISILILFLRK 622 >gi|154483916|ref|ZP_02026364.1| hypothetical protein EUBVEN_01622 [Eubacterium ventriosum ATCC 27560] gi|149735407|gb|EDM51293.1| hypothetical protein EUBVEN_01622 [Eubacterium ventriosum ATCC 27560] Length = 626 Score = 509 bits (1311), Expect = e-142, Method: Compositional matrix adjust. Identities = 268/620 (43%), Positives = 383/620 (61%), Gaps = 11/620 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDV+++G GHAGCEAA +A+LG +T + T +I M CNP IGG KGHLVRE+DA Sbjct: 7 NYDVVIVGAGHAGCEAALASARLGLNTIVFTVSVDSIALMPCNPNIGGTSKGHLVRELDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ ++LN KGPAV R QAD++ Y M++ + + ENL + Q EV Sbjct: 67 LGGEMGKNIDKTFIQSKMLNKSKGPAVHSLRAQADKQDYTREMRKTLENTENLTIRQAEV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 A E +I + + +VVL TG +L+ G + G G +N+L Sbjct: 127 AKLLVEDGVIKGVETVSGATYYAKSVVLATGVYLKAKCIYGDVCQYTGPNGLMAANNLTA 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KITNRQIECGI 242 S ++ R KTGTPAR+D K+I + K E+QF DER++PFSF TD + QI C + Sbjct: 187 SLIENGIKVRRFKTGTPARVDKKSIDFSKMEEQFGDERVVPFSFSTDPESVQKDQISCWL 246 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II ENI S ++SG I+ GPRYCPSIEDK+V+F ++N HQ+F+EPEGL T Sbjct: 247 TYTNEKTHEIIRENINRSPLFSGMIEGTGPRYCPSIEDKVVKFADKNRHQVFIEPEGLFT 306 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + +Y G+S++LPE++Q+ +T+PGLE V I+R YAIEYD I +L P LE KKI G Sbjct: 307 NEMYLGGMSSSLPEDVQYAMYKTVPGLENVKIVRNAYAIEYDCIEYGQLLPNLEFKKIKG 366 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQ NG++GYEEAAAQG++AGIN+AR + I R+ +YIGV+IDDL +K E Sbjct: 367 LFSAGQFNGSSGYEEAAAQGIIAGINAARYVQNKESIVLDRSQAYIGVLIDDLVTKESHE 426 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL- 481 PYRM TSRAEYR+ LR DNAD RLT IG ++G + Q+R+ ++ + ++ L Sbjct: 427 PYRMMTSRAEYRLLLRQDNADLRLTKIGYEVGLVP---QERYNYVCEKEKMIEKEIERLE 483 Query: 482 ---VLTSKNLSST--SISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 V +K + S S+ T E + P+ + + + + + VIE++ Sbjct: 484 NYKVGANKEVQSVLESLGSTTLKTATTLAELIRRPELDYDKIKPLDKERQPLNYDVIEQV 543 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 I Y+ Y RQ + + K E + IP+ FDY+ + +L E +KL +P N+ QAS Sbjct: 544 NINIKYSGYISRQKKQVENFKKIENKKIPEGFDYTKVNSLRKEAVQKLEFYRPINIGQAS 603 Query: 597 KIEGMTPAALNLLLIYIKKN 616 +I G++PA +++LLIY++++ Sbjct: 604 RISGVSPADISVLLIYMEQH 623 >gi|227500994|ref|ZP_03931043.1| glucose-inhibited division protein A [Anaerococcus tetradius ATCC 35098] gi|227216767|gb|EEI82165.1| glucose-inhibited division protein A [Anaerococcus tetradius ATCC 35098] Length = 629 Score = 509 bits (1311), Expect = e-142, Method: Compositional matrix adjust. Identities = 269/616 (43%), Positives = 377/616 (61%), Gaps = 8/616 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+G GHAGCEA A++LG T ++T +I M CNP IGG GKGH+VREIDA Sbjct: 10 SYDVIVVGAGHAGCEAGLAASRLGLKTLILTTSMESIADMPCNPNIGGTGKGHIVREIDA 69 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D IQ R+LN KGPAV R QAD+ Y M++ + ++ +D+ + EV Sbjct: 70 LGGQMAINIDKTFIQSRMLNTSKGPAVHSLRVQADKRAYHDEMKKTL--EDEVDLFEQEV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 N + I S ++ C +++ TGT+L G I IG+ + +G G S + L + Sbjct: 128 DKINYKDGKIVSCETVQGAIFECKALIICTGTYLNGKILIGEYEKVSGPHGLSAATFLSD 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT---DKITNRQIECG 241 S + F+ R KTGTPAR+D K++ +KTE Q D+ +IPFSF+ D Q +C Sbjct: 188 SLREMGFELRRFKTGTPARVDRKSLHLEKTEVQKGDKEVIPFSFLNEGEDFSHRHQEDCY 247 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T T ET IIMEN+ S IY G IK GPRYCPSIEDK+VRF +R+ HQ+F+EPEGL Sbjct: 248 LTYTRPETKEIIMENLYRSPIYGGHIKGIGPRYCPSIEDKMVRFPDRDVHQVFIEPEGLT 307 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 TD +Y G+S++LP+E+Q F +TI GLE V I+RP YAIEYD I+ ++L+ TLE+K Sbjct: 308 TDEMYIQGVSSSLPQEVQFDFYKTIVGLEDVKIMRPAYAIEYDMIDTRKLYRTLESKDYE 367 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GL+ AGQING++GYEEAA QGL+AGIN+A K + R+D+YIGV+IDDL ++G Sbjct: 368 GLYFAGQINGSSGYEEAAGQGLIAGINAALKIKGEKPLILDRSDAYIGVLIDDLVTEGTK 427 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRM TSR EYR+++R DNAD RLT +G +G + E R ++ + LKS+ Sbjct: 428 EPYRMMTSRCEYRLTMRQDNADQRLTKLGYDIGLVSEERYQKMLAKRNAIDCEIERLKSV 487 Query: 482 VLTSKNLSSTSISFKQDGKTRTA---YEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 LT K ++ + + Y+ L P+ L + PD + ++Q Sbjct: 488 SLTPKAETNQKLEELNTSPLKNGISLYDLLKRPEVDYDMLEAFDPDRPQLPKFQQIQVQT 547 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E Y Y +QM + + K E + + K+ DY +P L E EKL+ ++P ++ QAS+I Sbjct: 548 EIKYEGYIKKQMADIDKFKKLEGKKLAKNIDYFKIPGLKKESCEKLNEIQPESIGQASRI 607 Query: 599 EGMTPAALNLLLIYIK 614 G++PA +N+LLI +K Sbjct: 608 SGVSPADINVLLIRLK 623 >gi|34101970|gb|AAQ58337.1| glucose inhibited division protein A [Chromobacterium violaceum ATCC 12472] Length = 605 Score = 509 bits (1311), Expect = e-142, Method: Compositional matrix adjust. Identities = 266/598 (44%), Positives = 373/598 (62%), Gaps = 10/598 (1%) Query: 27 LGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVK 86 +G +T L+TH T+G MSCNP+IGG+GKGHLV+E+DAL G M D GIQFR LN Sbjct: 1 MGCATLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDALGGAMALATDIGGIQFRTLNAS 60 Query: 87 KGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIR 146 KGPAVR R QADR LY+ A++ + +Q NL + Q V E + + + R Sbjct: 61 KGPAVRATRAQADRILYKAAIREMLENQPNLTLFQQPVDDLLIEGDRVVGAITAIGITFR 120 Query: 147 CSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDG 206 TVVLT GTFL G IH+G GR GD +++L + + GRLKTGTP R+DG Sbjct: 121 AKTVVLTAGTFLSGKIHVGLENYTGGRAGDQAASTLGERLRELNLPVGRLKTGTPPRIDG 180 Query: 207 KTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITRTNLETHRIIMENIKHSAIYSG 265 +++ + E+Q D FS+ + + +Q+ C IT TN TH II S +++G Sbjct: 181 RSVDFSVMEEQPGDTPEPVFSYRGKRAMHPKQLPCWITHTNERTHDIIRSGFDRSPMFTG 240 Query: 266 DIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRT 325 I+ GPRYCPSIEDKI RF +++ HQ+FLEPEGL T YPNGIST+LP +IQ +R+ Sbjct: 241 VIEGVGPRYCPSIEDKINRFADKDSHQVFLEPEGLTTHEFYPNGISTSLPFDIQLAAVRS 300 Query: 326 IPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVA 385 I G+E +I+RPGYAIEYDY +P+ L +LETK I GLF AGQINGTTGYEEAAAQGL+A Sbjct: 301 IRGMENAHILRPGYAIEYDYFDPRGLKASLETKAIQGLFFAGQINGTTGYEEAAAQGLLA 360 Query: 386 GINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNR 445 G+N+ + + + C R ++Y+GV++DDL +KGV EPYRMFTSRAE+R+ LR DNAD R Sbjct: 361 GLNAGLFAREQEAWCPRRDEAYLGVLVDDLITKGVSEPYRMFTSRAEFRLQLREDNADLR 420 Query: 446 LTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGK----T 501 LT +G KLG +G+ + F + ++ L++ L L+ + + GK Sbjct: 421 LTEMGRKLGVVGDEQWDAFCRKRDAVEAEKARLQATWLHPSKLADPAALARVLGKPIERE 480 Query: 502 RTAYEFLSYPDFSIQNLFSI---CPDARKFSSLVIERLQIESSYAAYTGRQMIE-AKEIK 557 T + L P+ + L ++ A + + V E+++I+ Y Y RQ E A+ Sbjct: 481 YTLQDLLKRPNVPYRELMTVPEAADGAPELADEVAEQVEIQVKYQGYINRQNEELARRDN 540 Query: 558 FEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 E+ RL P D DY + LS E+++KL+ +P L QAS+I+G+TPAA+ LL++++++ Sbjct: 541 LEDIRL-PGDIDYGLVKGLSKEVQQKLNQQRPETLGQASRIQGITPAAVALLMVHLRR 597 >gi|187777373|ref|ZP_02993846.1| hypothetical protein CLOSPO_00929 [Clostridium sporogenes ATCC 15579] gi|187774301|gb|EDU38103.1| hypothetical protein CLOSPO_00929 [Clostridium sporogenes ATCC 15579] Length = 625 Score = 509 bits (1310), Expect = e-142, Method: Compositional matrix adjust. Identities = 275/620 (44%), Positives = 389/620 (62%), Gaps = 15/620 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DV+VIG GHAGCEAA +A++G T + T +I M+CNP IGG KGHLVREIDA Sbjct: 7 DFDVVVIGAGHAGCEAALASARMGCKTLICTMNLDSIALMACNPNIGGTAKGHLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG D IQ R+LN KGPAV R QAD++ Y M+ + ++N+ + Q EV Sbjct: 67 LGGEMGINIDHTFIQSRMLNTSKGPAVHSLRAQADKKRYSERMKHLLEKEKNVILRQLEV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + E + + I+ ++ + ++L TGT+L+G I IG + +G G P+N L Sbjct: 127 IQIDVEDHKVKGILTKNGAYFTTKAIILCTGTYLKGKIIIGDIIYSSGPSGLYPANDLSQ 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S + + R KTGTPAR++ +++ + K +Q DE+++PFSF+ DK+ QI C +T Sbjct: 187 SLLDLGINLRRFKTGTPARINKRSVDFSKMIEQPGDEKIVPFSFIHDKLDKDQISCYLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ +TH+II ENI S +Y+G I+ GPRYCPSIEDKIVRF +++ HQIF+EPEG NT+ Sbjct: 247 TSEQTHKIIHENIHRSPLYNGSIEGVGPRYCPSIEDKIVRFPDKDKHQIFIEPEGENTEE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+S++LPE++Q + R++PGLE I+R YAIEYD I+P++L TLE K I+GL+ Sbjct: 307 LYVGGMSSSLPEDVQIKMYRSVPGLENAEILRTAYAIEYDCIDPQQLDLTLEFKNINGLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ NG++GYEEAAAQGLVAGINS K D + R+D+YIGV+IDDL +KG EPY Sbjct: 367 GAGQFNGSSGYEEAAAQGLVAGINSVLKIKGEDPLILKRSDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSRAEYR+ LR DNAD RLT +G K+G + E R +F + LK++ +T Sbjct: 427 RMMTSRAEYRLLLRQDNADLRLTELGYKIGLVKEDRYDKFLNRKKNVESEVERLKNVQIT 486 Query: 485 SKN------LSSTSISFKQDGKTRTAYEFLSYPD---FSIQNLFSICPDARKFSSLVIER 535 K L S K K + YE + P+ F ++ L PD S E Sbjct: 487 GKREINEFLLEKGSTELK---KPISLYELIKRPELDYFKVEPLDDKRPD---LSDDEKEE 540 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 + I + Y Y +Q+ + ++ K E RLIPK +Y + L E +KL +KP N+ QA Sbjct: 541 INIIAKYEGYINKQLEQVEQFKKYEDRLIPKSINYPDVKGLRLEAIQKLEKIKPINIGQA 600 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G++PA +++LLIY+++ Sbjct: 601 SRISGVSPADISVLLIYMER 620 >gi|255521613|ref|ZP_05388850.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes FSL J1-175] Length = 629 Score = 509 bits (1310), Expect = e-142, Method: Compositional matrix adjust. Identities = 264/619 (42%), Positives = 378/619 (61%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+G GHAG EA + ++GA T ++T + M CNP++GG KG +VREIDA Sbjct: 8 TFDVIVVGAGHAGVEAGLASGRMGAKTLMLTINLDMVAFMPCNPSVGGPAKGVVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ M+ I +EN+ + QG V Sbjct: 68 LGGEMGRNTDKTYIQMRMLNTGKGPAVRALRAQADKWDYQHEMKHTIEKEENITLRQGLV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ ++ TVV+TTGTF RG I +G+L+ +G PS L Sbjct: 128 DRLVIEDGVCKGVITNSGAIYYAKTVVITTGTFSRGEIIVGELRYSSGPNNQQPSVKLSE 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F+ R KTGTP R+ TI + KTE+Q D+ FSF T ++ Q+ C +T Sbjct: 188 HLEELGFELRRFKTGTPPRVKSSTIDYSKTEEQPGDDHPRAFSFDTVEMLLDQLPCWLTY 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +++ K G RYCPSIEDKIVRF ++ HQIFLEPEG NT+ Sbjct: 248 TNETTHEIIQANLHRSPMFTATKKGTGARYCPSIEDKIVRFSDKPRHQIFLEPEGKNTEE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPEE+Q + +RTIPGLE V ++R GYAIEYD + P +L+P+LETK + GLF Sbjct: 308 VYVQGLSTSLPEEVQREMLRTIPGLENVEMMRVGYAIEYDAVMPDQLWPSLETKLVEGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+ARK + + + R +YIGV+IDDL +KG EPY Sbjct: 368 TAGQINGTSGYEEAAGQGLMAGINAARKVFEKEPVILGRDQAYIGVLIDDLVTKGTEEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF-----AKYIQEYNFLRSLLK 479 R+ TSRAEYR+ LR DNAD RLT IG ++G I + R +RF A ++ ++ +K Sbjct: 428 RLLTSRAEYRLLLRHDNADLRLTEIGHEIGLISDERYERFLAKQSAIEAEKERLQKTRIK 487 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 L +DG A + L P+ + + I + + E+++I+ Sbjct: 488 PTAEVQAMLKEIGSGELKDGI--LAADLLRRPEITYDKIAQIVSRETFVTDEIAEQVEIQ 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + ++ +++K E + IP++ DY ++ L+ E EKL ++P ++ QA +I Sbjct: 546 IKYEGYIQKSNLQVEKMKRMEDKKIPENIDYDAISGLATEALEKLKKIEPLSIAQARRIS 605 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 606 GVNPADISILLVYIEQGKI 624 >gi|308270192|emb|CBX26804.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [uncultured Desulfobacterium sp.] Length = 635 Score = 509 bits (1310), Expect = e-142, Method: Compositional matrix adjust. Identities = 276/617 (44%), Positives = 380/617 (61%), Gaps = 3/617 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + +++YD+IV+G GHAGCEAA AA++G S L+ + +M C+P++GG+ KG LV+ Sbjct: 3 LYSKNYDIIVVGAGHAGCEAALSAARMGCSVLLVAIDLDKLAAMPCSPSVGGMAKGQLVK 62 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DAL G M R++D + IQ+R LN KKGPAV RTQ D+ Y AM+ + Q LD+ Sbjct: 63 EVDALGGEMARISDKSAIQYRTLNTKKGPAVHSSRTQNDKLRYHTAMKAVVEKQPGLDLK 122 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E I+ I+ VVL TGTFL G+IHIG + AGR G+ S Sbjct: 123 QVFVERLLVENGKITGIIDYTGYCYMAKAVVLATGTFLSGLIHIGANSMKAGRAGEFASY 182 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 SL + + F+ GR+KTGTP RL +I + +Q ++ PFSF T+ I+ Q+ Sbjct: 183 SLAQNLKELGFNLGRMKTGTPPRLHKSSIDFTVFSRQDSESDPTPFSFFTNSISLPQMPS 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 + T+++T I+++N+K SA+Y G IK RYCPS EDKIV+F ER H + LEPEGL Sbjct: 243 YMGHTSVKTREIVLKNLKFSALYGGIIKGVSARYCPSFEDKIVKFPERETHHVILEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 +T+ +Y +G+ +LP EIQ Q +R+I GLE+ IIRP YAIEYDYINP L TLETK I Sbjct: 303 DTEEIYASGLGNSLPVEIQIQLVRSIKGLEEAQIIRPAYAIEYDYINPVNLKQTLETKLI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 SGLFLAGQINGT+GYEEAAAQGL AGIN++ K R+ +YI VM+DDL +KG Sbjct: 363 SGLFLAGQINGTSGYEEAAAQGLWAGINASCLVQKRPPFILDRSQAYIAVMVDDLVTKGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 LEPYRMFTSRAEYR+ LR DNAD RL G +LG I + K + ++ + +KS Sbjct: 423 LEPYRMFTSRAEYRLMLREDNADLRLMEAGHELGLIDDDTIKELNERRKQIQAETARIKS 482 Query: 481 LVLT-SKNLSSTSISFKQDGKTRTAY--EFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 +V+ SK ++ S + Y + L + + V ++++ Sbjct: 483 VVIKPSKEVNLFLESRGTNPIDNGVYLDQLLKRTQLDYSAVCVLAGGCENIDPKVSKQVE 542 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I Y Y RQ E + K E+ I + FD+S + LSNELKEKL+ +KP +L QAS+ Sbjct: 543 IGVKYEGYIERQQKEIDKFKNLERIKIKEGFDFSHVHGLSNELKEKLNEIKPASLGQASR 602 Query: 598 IEGMTPAALNLLLIYIK 614 I+GMTPAA+++L+I +K Sbjct: 603 IDGMTPAAVSVLMIALK 619 >gi|311745075|ref|ZP_07718860.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Algoriphagus sp. PR1] gi|126577588|gb|EAZ81808.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Algoriphagus sp. PR1] Length = 621 Score = 509 bits (1310), Expect = e-142, Method: Compositional matrix adjust. Identities = 274/620 (44%), Positives = 382/620 (61%), Gaps = 17/620 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAA AAK+G+ L T +TI MSCNPA+GG+ KG +VREIDAL Sbjct: 5 YDVIVVGAGHAGCEAAHAAAKMGSKVLLCTMNMNTIAQMSCNPAMGGVAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADR----ELYRLAMQREILSQENLDVIQ 121 G+ G ++D + IQFR+LN KGPA+ PR+Q DR E +RLA++R N+D Q Sbjct: 65 GGMSGIISDKSMIQFRMLNRSKGPAMWSPRSQNDRMRFAEEWRLALER----TPNVDFWQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 + G + + + I +VVLT GTFL G+IHIG+ + GR G+S + Sbjct: 121 EMITGIIEKDGRVKGVKTGIGIEIEAKSVVLTNGTFLNGLIHIGEKQFGGGRTGESAAKG 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--NRQIE 239 + + F++GR+KTGTP R+DG+++ + K E Q+ DE FS+ +D+ + Q Sbjct: 181 ITEQLVSLGFESGRMKTGTPPRVDGRSLDYSKMEVQYGDENPEKFSY-SDETSPIKEQRT 239 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN E H + E S +++G IK GPRYCPSIEDKI RF ER HQIF+EPEG Sbjct: 240 CWITYTNKEVHSTLEEGFDRSPMFNGRIKGLGPRYCPSIEDKINRFAERERHQIFVEPEG 299 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 NT +Y NG ST+LPE++Q++ I+ I G E + RPGYAIEYD+ P +L TLET+ Sbjct: 300 WNTVEIYVNGFSTSLPEDVQYKAIQKITGFENAKMFRPGYAIEYDFFPPTQLKLTLETQL 359 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 + GL+ AGQINGTTGYEEAA+QGL+AGIN++ K + D R+D+YIGV+IDDL +KG Sbjct: 360 VEGLYFAGQINGTTGYEEAASQGLIAGINASLKVQEKDPFLLKRSDAYIGVLIDDLINKG 419 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAE+R+ LR DNAD RLT +G L + R + Q L + LK Sbjct: 420 TEEPYRMFTSRAEFRLLLRQDNADLRLTELGYNLNLASQERFDKMQSKKQNTAKLINDLK 479 Query: 480 SLVLTSKNLSS--TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARK----FSSLVI 533 L + ++ ++ + + + + L P + + + PD K F V Sbjct: 480 QKKLAPEQINKGLEALGTAEIKEKISLEKLLKRPQLGLDQMMDLDPDISKFLEGFPKDVR 539 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+ +++ Y +Y ++ ++ E IP FDY ++PALSNE K+KL +KP L Sbjct: 540 EQAEVQIKYDSYIEKEQQMVNKLSNMENFKIPLKFDYLTIPALSNEGKQKLHKIKPETLG 599 Query: 594 QASKIEGMTPAALNLLLIYI 613 QAS+I G++PA L++L +Y+ Sbjct: 600 QASRISGVSPADLSILTVYL 619 >gi|325979483|ref|YP_004289199.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325179411|emb|CBZ49455.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 634 Score = 509 bits (1310), Expect = e-142, Method: Compositional matrix adjust. Identities = 270/617 (43%), Positives = 378/617 (61%), Gaps = 8/617 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAG EA+ AA++G T L T + M CNPAIGG KG +VREIDA Sbjct: 8 NYDVIVVGAGHAGVEASLAAARMGCKTMLATINLEMLSFMPCNPAIGGSAKGIVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ ++LN KGPAVR R QAD+ LY M+ + QENL + Q + Sbjct: 68 LGGEMGKNIDRTYIQMKMLNTGKGPAVRALRAQADKALYSRTMKHTVEQQENLTLRQSMI 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + N VV+TTGT LRG I +G+LK +G S L + Sbjct: 128 EEVLVEDGKVVGVRTATNQKFSAKAVVITTGTALRGEIILGELKYSSGPNNSLASIGLAD 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGI 242 + + + GR KTGTP R+ +I +D+TE Q DE+ FSFM+ + QI C + Sbjct: 188 NLKELGLEIGRFKTGTPPRIKASSINYDETEIQPGDEKPNHFSFMSNDEDYLKDQIPCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +H II +N+ + ++SG +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG T Sbjct: 248 TYTNQTSHDIINKNLYRAPMFSGIVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRET 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q + I +I GLE ++R GYAIEYD + P +L TLETKKISG Sbjct: 308 EEVYIQGLSTSLPEDVQKELIHSIKGLENAEMMRTGYAIEYDIVLPHQLRATLETKKISG 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQ NGT+GYEEAA QG+VAGIN+A K + R+D+YIGVMIDDL +KG LE Sbjct: 368 LFTAGQTNGTSGYEEAAGQGIVAGINAALKVQGKPEMILKRSDAYIGVMIDDLVTKGTLE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYR+ TSRAEYR+ LR DNAD RLT IG ++G + + R +RF ++++ + L +L Sbjct: 428 PYRLLTSRAEYRLILRHDNADMRLTEIGHRVGLVDDERYQRFLNRKRQFDNELTRLSTLK 487 Query: 483 L---TSKNLSSTSISFKQDGKTRTAYEFLSYPD--FSIQNLFSICPDARKFSSLVIERLQ 537 + N ++ FK TA EF+ P+ + I F + P K S VIE L+ Sbjct: 488 IKPVKETNARIEALGFKTLTDALTAKEFMRRPEINYDIATSF-VGPAEEKLDSKVIELLE 546 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 E Y Y + + + ++K E++ IP + D+ + +++ E ++K + P + QAS+ Sbjct: 547 TEIKYEGYINKALDQVAKMKRMEEKRIPANIDWDDIDSIATEARQKFKKINPETIGQASR 606 Query: 598 IEGMTPAALNLLLIYIK 614 I G+ PA +++L++Y++ Sbjct: 607 ISGVNPADISILMVYLE 623 >gi|262066109|ref|ZP_06025721.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Fusobacterium periodonticum ATCC 33693] gi|291380204|gb|EFE87722.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Fusobacterium periodonticum ATCC 33693] Length = 633 Score = 509 bits (1310), Expect = e-142, Method: Compositional matrix adjust. Identities = 274/630 (43%), Positives = 379/630 (60%), Gaps = 21/630 (3%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +D+IV+G GHAGCEAA +A++G TA+ T IG MSCNP++GG K HL REID Sbjct: 2 QEFDIIVVGAGHAGCEAALASARMGMKTAVFTISLDNIGVMSCNPSLGGPAKSHLAREID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G MGR D IQ RVLN KKGPAVR R QAD+ Y M++ + +NL VIQG Sbjct: 62 ALGGEMGRNIDKTFIQIRVLNTKKGPAVRSLRAQADKMTYANEMKKTLEHTDNLSVIQGM 121 Query: 124 VAGFNTE----KNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 V+ E + +I I +++ R V+L TGTFLRG+IHIG++ AGRMG+ S Sbjct: 122 VSELIVEEENGRKVIKGIKIREGLEYRAKIVILATGTFLRGLIHIGEVNFSAGRMGELSS 181 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADE-RLIPFSFMT---DKITN 235 L S K GR KTGTPAR+D +TI + E+Q D+ +++ FS T + ++ Sbjct: 182 EDLPLSLEKVGLKLGRFKTGTPARIDARTIDFSVLEEQPGDKSQVLKFSNRTTDEEALSR 241 Query: 236 RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFL 295 RQI C I TN + H II + S +++G I+ GPRYCPSIEDK+ R+ ++N H +FL Sbjct: 242 RQISCYIAHTNDKVHEIIKNARERSPMFNGKIQGLGPRYCPSIEDKVFRYPDKNQHHLFL 301 Query: 296 EPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTL 355 E EG T+ +Y G+S++LP ++Q + I+ + G E I+R YAIEYDY+ P+E+ TL Sbjct: 302 EREGYETNEIYLGGMSSSLPVDVQEEMIKNLQGFENAKIMRYAYAIEYDYVPPEEIKYTL 361 Query: 356 ETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDL 415 E++ I LFLAGQINGT+GYEEA AQGL+AGIN+ RK + I R DSYIG +IDDL Sbjct: 362 ESRSIDNLFLAGQINGTSGYEEAGAQGLMAGINAVRKLRNEEPIILDRADSYIGTLIDDL 421 Query: 416 TSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLR 475 SKG EPYRMFT+R+EYR+ LR DNAD RL+ IG +LG I E +R K ++ + Sbjct: 422 VSKGTNEPYRMFTARSEYRLYLREDNADLRLSKIGYELGLIPEEEYQRVEKKRRDVELIT 481 Query: 476 SLLKSLVLTSKNLSSTSISFK------QDGKTRTAYEFLSYPDFSIQNLFSICP-----D 524 +L + N K +DG T E L P+ + +++ I D Sbjct: 482 EILTRTSVGPSNPRVNETLLKRGENPIKDGS--TLLELLRRPEVTFKDIEYISEEIKGVD 539 Query: 525 ARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKL 584 + + +++I Y Y R + ++ K E + IP D DY L + E K+KL Sbjct: 540 LQGYDHDTTYQVEITVKYQGYINRALKMIEKHKSMENKKIPADIDYDDLKTIPKEAKDKL 599 Query: 585 SILKPFNLLQASKIEGMTPAALNLLLIYIK 614 +KP N+ QAS+I G++PA + +LIY+K Sbjct: 600 KRIKPINIGQASRISGVSPADIQAILIYLK 629 >gi|41058559|gb|AAR99261.1| glucose-inhibited division protein A [Candidatus Blochmannia festinatus] Length = 621 Score = 509 bits (1310), Expect = e-142, Method: Compositional matrix adjust. Identities = 285/630 (45%), Positives = 384/630 (60%), Gaps = 48/630 (7%) Query: 11 IGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMG 70 IGGGHAG EAA A+ L +T LITH T+G MSCNP+IGG+GKGHLV+E+DA+ G+M Sbjct: 1 IGGGHAGTEAALAASTLQCNTLLITHNIDTLGQMSCNPSIGGIGKGHLVKEVDAMGGVMA 60 Query: 71 RVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTE 130 D GIQFR+LN KG AV+ R QAD+ LYR +++ + +Q L ++Q V Sbjct: 61 SAIDQPGIQFRILNSSKGAAVKSTRAQADKILYRQIIRKYLENQNYLYILQASVEDVIVS 120 Query: 131 KN-IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS-FMK 188 +N II ++ + + I +VVLTTGTFL G I+IG GR GD S+SL + + Sbjct: 121 QNRIIGVVIPKIEAKIYAKSVVLTTGTFLNGKIYIGMKNFHGGRAGDLESSSLLSKKLQE 180 Query: 189 FDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQIECGITRTNL 247 RLKTGT R+ K + + Q++D+ + FSF+ + K +QI C IT TN Sbjct: 181 LSLRMSRLKTGTSPRIHSKGVNFKCMFAQYSDDPVPVFSFLGSSKQHPKQIPCYITHTNS 240 Query: 248 ETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYP 307 +TH II N+ +S +Y+G I PRYCPSIEDKI RF ++ HQIFLEPEGL T +Y Sbjct: 241 KTHDIIRSNLNYSPVYAGLISGIPPRYCPSIEDKITRFSDKKTHQIFLEPEGLTTSEIYL 300 Query: 308 NGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAG 367 NGI+T+LP IQ Q +++I GLE +I+RPGYAIEYD+ NP +L TLE+K ISGLFL+G Sbjct: 301 NGIATSLPFHIQVQIVQSIKGLENAHILRPGYAIEYDFFNPVDLKLTLESKLISGLFLSG 360 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 QINGTTGYEEAAAQGL++GIN+AR + R +Y+GV++DDL + G EPYRMF Sbjct: 361 QINGTTGYEEAAAQGLLSGINAARYAQNKSEWYPRRDQAYLGVLVDDLCTHGAKEPYRMF 420 Query: 428 TSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQK-----------RFAKYIQEYNF--- 473 TSRAEYR+SLR DNAD RLT I KLG I + R K F K Y F Sbjct: 421 TSRAEYRLSLREDNADLRLTNITRKLGLINDNRWKTFCVKQENIEREFQKLRNTYIFPNT 480 Query: 474 -----LRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSIC------ 522 L ++LKS +LT+K + + L P+ + LF + Sbjct: 481 TDAMKLNNILKSSLLTNK---------------LSGEKLLKRPEINYSTLFQLSVFKPAI 525 Query: 523 PDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKE 582 PD + V E+++I+ YA Y RQ E + E ++P D +Y + LS E+ + Sbjct: 526 PDNQ-----VYEQIEIQVKYAGYLHRQQEEINKYLRNENTVLPADINYHDISGLSIEVID 580 Query: 583 KLSILKPFNLLQASKIEGMTPAALNLLLIY 612 KL +P+++ QAS+IEG+TPAA++ LLI+ Sbjct: 581 KLDYYRPYSVGQASRIEGITPAAISNLLIW 610 >gi|306832458|ref|ZP_07465610.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304425358|gb|EFM28478.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 634 Score = 508 bits (1309), Expect = e-142, Method: Compositional matrix adjust. Identities = 273/628 (43%), Positives = 384/628 (61%), Gaps = 11/628 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAG EA+ AA++G T L T + M CNPAIGG KG +VREIDA Sbjct: 8 NYDVIVVGAGHAGVEASLAAARMGCKTMLATINLEMLSFMPCNPAIGGSAKGIVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ ++LN KGPAVR R QAD+ LY M+ + QENL + Q + Sbjct: 68 LGGEMGKNIDRTYIQMKMLNTGKGPAVRALRAQADKALYSRTMKHTVEQQENLTLRQSMI 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + N VV+TTGT LRG I +G+LK +G S L + Sbjct: 128 EEVLVEDGKVVGVRTATNQKFSAKAVVITTGTALRGEIILGELKYSSGPNNSLASIGLAD 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGI 242 + + + GR KTGTP R+ +I +D+TE Q DE+ FSFM+ + QI C + Sbjct: 188 NLKELGLEIGRFKTGTPPRIKASSINYDETEIQPGDEKPNHFSFMSNDEDYLKDQIPCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +H II +N+ + ++SG +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG T Sbjct: 248 TYTNQTSHDIINKNLYRAPMFSGIVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRET 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q + I +I GLE ++R GYAIEYD + P +L TLETKKISG Sbjct: 308 EEVYIQGLSTSLPEDVQKELIHSIKGLENAEMMRTGYAIEYDIVLPHQLRATLETKKISG 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQ NGT+GYEEAA QG+VAGIN+A K + R+D+YIGVMIDDL +KG LE Sbjct: 368 LFTAGQTNGTSGYEEAAGQGIVAGINAALKVQGKPEMILKRSDAYIGVMIDDLVTKGTLE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYR+ TSRAEYR+ LR DNAD RLT IG ++G + + R +RF ++++ + L +L Sbjct: 428 PYRLLTSRAEYRLILRHDNADMRLTEIGHRVGLVDDERYQRFLNRKRQFDNELTRLSTLK 487 Query: 483 L---TSKNLSSTSISFKQDGKTRTAYEFLSYPD--FSIQNLFSICPDARKFSSLVIERLQ 537 + N ++ FK TA EF+ P+ + I F + P K S VIE L+ Sbjct: 488 IKPVKETNARIEALGFKPLTDALTAKEFMRRPEINYDIATSF-VGPAEEKLDSKVIELLE 546 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 E Y Y + + + ++K E++ IP + D+ + +++ E ++K + P + QAS+ Sbjct: 547 TEIKYEGYINKALDQVAKMKRMEEKRIPANIDWDDIDSIATEARQKFKKINPETIGQASR 606 Query: 598 IEGMTPAALNLLLIYI---KKNTVKLNE 622 I G+ PA +++L++Y+ +K+ K+N+ Sbjct: 607 ISGVNPADISILMVYLEGKQKHHRKVND 634 >gi|254415371|ref|ZP_05029132.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Microcoleus chthonoplastes PCC 7420] gi|196177846|gb|EDX72849.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Microcoleus chthonoplastes PCC 7420] Length = 648 Score = 508 bits (1309), Expect = e-142, Method: Compositional matrix adjust. Identities = 265/617 (42%), Positives = 371/617 (60%), Gaps = 9/617 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+G GH+GCEAA AA+LG T L+T I CNPA+G K L E+DA Sbjct: 12 AFDVIVVGAGHSGCEAALAAARLGCRTLLLTLNLDKIAWQPCNPAVGAPAKSQLAHEVDA 71 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G +G++AD +Q RVLN +GPAV R Q D+ Y M+R + +QENL + +G V Sbjct: 72 LGGEIGKMADRTYLQKRVLNQSRGPAVWALRAQTDKREYAAVMKRIVENQENLVIREGMV 131 Query: 125 AGFNTEKN-IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 N + + + V+LTTGTFL G I +G + AGR G+ + L Sbjct: 132 TDLVLGANDQVIGVQTYFGVAFQAPAVILTTGTFLGGCIWVGNKSMSAGRAGEFAAVGLT 191 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGI 242 + + F+TGRLKTGTPAR+D +++ + K E Q DE + FSF + R Q+ C I Sbjct: 192 ETLNRLGFETGRLKTGTPARVDKRSVDYSKMEPQPGDEVVSWFSFDPEVWVEREQMNCYI 251 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 TRT +TH++I +N+ S +Y G + + GPRYCPSIEDKIVRF ++ HQIF+EPEG + Sbjct: 252 TRTTAQTHQLIRDNLHLSPVYGGWVDAKGPRYCPSIEDKIVRFADKQSHQIFIEPEGRDI 311 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +Y G ST LPE +Q Q +R++PGLE ++RP YA+EYDY+ + FPTL TKKI G Sbjct: 312 PELYIQGFSTGLPENLQLQMLRSLPGLEHCTMLRPAYAVEYDYLPATQCFPTLMTKKIEG 371 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQG+VAGIN+ R + + F R +SYIG +IDDL +K + E Sbjct: 372 LFCAGQINGTTGYEEAAAQGIVAGINAVRYVRHQEMLVFPREESYIGTLIDDLCTKDLRE 431 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRM TSR+EYR+ LR DNAD RLTP+G ++G I +RR + + + ++ N + Sbjct: 432 PYRMLTSRSEYRLLLRSDNADRRLTPLGREIGLIDDRRWQLYTE--KQANIAAEKERLQT 489 Query: 483 LTSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 + K ++ D + R T E L P F NL + + + Sbjct: 490 VRIKEHEELGVAIASDTQQRIKGSITLAELLRRPKFHYTNLDHYGLGNSSLNQAERDGAE 549 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ YA Y RQ + ++ + +R +P D DY ++ LS E +EKLS ++P + QAS+ Sbjct: 550 IDIKYAGYLQRQQNQIDQVSRQSQRRLPTDLDYDAIETLSKESREKLSQVQPLTIGQASR 609 Query: 598 IEGMTPAALNLLLIYIK 614 I G+ PA +N LL+Y++ Sbjct: 610 IGGVNPADINALLVYLE 626 >gi|291558323|emb|CBL35440.1| glucose-inhibited division protein A [Eubacterium siraeum V10Sc8a] Length = 625 Score = 508 bits (1309), Expect = e-142, Method: Compositional matrix adjust. Identities = 276/614 (44%), Positives = 379/614 (61%), Gaps = 9/614 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAA AA+LG TA+ T I +M CNP IGG KG LVRE+D+L Sbjct: 7 YDVIVVGAGHAGCEAALAAARLGCKTAVFTLSLDAIANMPCNPCIGGSAKGQLVRELDSL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MGR ADA IQ R+LN KGPAV R Q+DR Y M+ + ENLD+ Q EV Sbjct: 67 GGEMGRAADATFIQSRMLNKGKGPAVHSLRVQSDRVKYHTFMKSVLEHTENLDIKQAEVT 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E I+ I + + V++TTGT+L G IHIG+L +G S + L S Sbjct: 127 EVCAENGKITGIKTRLGAFYPAGCVIITTGTYLGGKIHIGELNYQSGPDNVSAALQLTES 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 R KTGTPAR+ ++I + E+Q DE + PF F +++C +T T Sbjct: 187 LRNLGLSMRRFKTGTPARVHKRSIDFSVMEEQDGDEYITPFCFDNTFKLENKVKCYVTYT 246 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N ETHRII++N+ S +Y+G IK GPRYCPSIEDKIVRF ++ HQ+F+EP GL+TD Sbjct: 247 NAETHRIILDNLDRSPLYAGRIKGVGPRYCPSIEDKIVRFSDKPRHQLFVEPMGLDTDEY 306 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+S++LPE++Q +F+RTI GLE V I+RP YAIEYD +P EL+PTLE KKISGLF Sbjct: 307 YLQGMSSSLPEDVQIKFLRTIKGLEHVEIMRPAYAIEYDCCDPLELYPTLEFKKISGLFG 366 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ N T+GYEEAAAQG++AG+N+A K + RT S+IG +IDDL +KG +EPYR Sbjct: 367 AGQFNCTSGYEEAAAQGVIAGMNAAMKIKGREQYIPDRTTSFIGTLIDDLVTKGCVEPYR 426 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRS----LLKSL 481 M TSR+EYR+ LR DNA++RL PIG K G I + R +RF ++ N L + + K+ Sbjct: 427 MMTSRSEYRLLLRQDNANDRLVPIGHKFGLISDERYQRF---LERKNILDNETSRIKKAT 483 Query: 482 VLTSKNLSSTSISFKQDGKTRTA--YEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + L+ S T+ E L P ++L +A + +I++L+I Sbjct: 484 IYPCEELNKMLESKGTSPITQGVKFIELLKRPQIDYRDLAQFDENAPELEHDIIDKLEIN 543 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y Q + +++K E++ +P D DY ++ L E +EKL+ +P N+ QA +I Sbjct: 544 IKYEGYIKTQTEKIEQMKRLEEKQLPTDIDYKTISGLRLEAQEKLNKYRPLNIGQAGRIS 603 Query: 600 GMTPAALNLLLIYI 613 G+ PA +++LLI++ Sbjct: 604 GVNPADVSVLLIWL 617 >gi|171778577|ref|ZP_02919704.1| hypothetical protein STRINF_00556 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282800|gb|EDT48224.1| hypothetical protein STRINF_00556 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 632 Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust. Identities = 268/616 (43%), Positives = 378/616 (61%), Gaps = 6/616 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAG EA+ AA++G T L T + M CNPAIGG KG +VREIDA Sbjct: 8 NYDVIVVGAGHAGVEASLAAARMGCKTMLATINLEMLSFMPCNPAIGGSAKGIVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ ++LN KGPAVR R QAD+ LY M+ + QENL + Q + Sbjct: 68 LGGEMGKNIDKTYIQMKMLNTGKGPAVRALRAQADKALYSRTMKHTVEQQENLTLRQSMI 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + N VV+TTGT LRG I +G+LK +G S L + Sbjct: 128 EEVLVEDGKVVGVRTATNQKFSAKAVVITTGTALRGEIILGELKYSSGPNNSLASIGLAD 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGI 242 + + + GR KTGTP R+ +I +D+TE Q DE+ FSFM+ + QI C + Sbjct: 188 NLKELGLEIGRFKTGTPPRVKASSINYDETEIQPGDEKPNHFSFMSNDEDYLKDQIPCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +H II +N+ + ++SG +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG T Sbjct: 248 TYTNQTSHDIINKNLYRAPMFSGIVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRET 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q + + +I GLE ++R GYAIEYD + P +L TLETKKISG Sbjct: 308 EEVYIQGLSTSLPEDVQKELVHSIKGLENAEMMRTGYAIEYDIVLPHQLRATLETKKISG 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQ NGT+GYEEAA QG+VAGIN+A K + R+D+YIGVMIDDL +KG LE Sbjct: 368 LFTAGQTNGTSGYEEAAGQGIVAGINAALKVQGKPEMILKRSDAYIGVMIDDLVTKGTLE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYR+ TSRAEYR+ LR DNAD RLT IG ++G + E R +R+ ++++ + L SL Sbjct: 428 PYRLLTSRAEYRLILRHDNADMRLTEIGHRVGLVDEERYERYLNRKRQFDKELTRLSSLK 487 Query: 483 ---LTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQI 538 + N ++ FK TA EF+ P+ + + S + P K S V+E L+ Sbjct: 488 IKPIKETNARIEALGFKPLTDALTAKEFMRRPEINYEIATSFVGPAEEKLDSKVVELLET 547 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E Y Y + + + ++K E++ IP + D+ + +++ E ++K + P + QAS+I Sbjct: 548 EIKYEGYINKALDQVAKMKRMEEKRIPANIDWDDIDSIATEARQKFKKINPETIGQASRI 607 Query: 599 EGMTPAALNLLLIYIK 614 G+ PA +++L++Y++ Sbjct: 608 SGVNPADISILMVYLE 623 >gi|325265450|ref|ZP_08132173.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium sp. D5] gi|324029308|gb|EGB90600.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium sp. D5] Length = 630 Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust. Identities = 269/617 (43%), Positives = 383/617 (62%), Gaps = 11/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+ V+G GHAGCEAA AA+LG T + T +I M CNP IGG KGHLVRE+DAL Sbjct: 15 YDIAVVGAGHAGCEAALAAARLGFKTVIFTVSVDSIALMPCNPNIGGSSKGHLVREVDAL 74 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+V D IQ ++LN KGPAV R QAD+ Y M++ + +Q+NLD+ Q EV Sbjct: 75 GGEMGKVIDKTFIQSKMLNKSKGPAVHSLRAQADKANYSRTMRQVLQNQKNLDIRQMEVT 134 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E+ ++ + ++ RC VVL TGT+L+ G + G G +N L +S Sbjct: 135 DILAEEGRVTGVQTYSGAIYRCRAVVLCTGTYLKARCIYGDISTYTGPNGLQAANHLTDS 194 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KITNRQIECGIT 243 R KTGTPAR+D ++ + K E+Q DER++PFSF TD + Q C +T Sbjct: 195 LKSLGIKMYRFKTGTPARIDKNSVDFSKMEEQKGDERVVPFSFTTDPEAVQIEQASCWLT 254 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II N+ S +YSG I+ GPRYCPSIEDK+V+F ++N HQ+F+EPEGL T+ Sbjct: 255 YTNQNTHDIIRANLDRSPLYSGMIEGTGPRYCPSIEDKVVKFSDKNRHQVFIEPEGLETN 314 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G+S++LPE++Q+ R++PGLE V I+R YAIEYD I+ ++L TLE K + GL Sbjct: 315 EMYVGGMSSSLPEDVQYAMYRSVPGLENVKIVRNAYAIEYDCIDARQLKSTLEFKNVEGL 374 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F GQ NG++GYEEAAAQGLVAGIN+ARK + I R+ Y+GV+IDDL +K EP Sbjct: 375 FSGGQFNGSSGYEEAAAQGLVAGINAARKLQEKQGIVIDRSQGYVGVLIDDLVTKESHEP 434 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL-- 481 YRM TSRAEYR+ LR DNAD RLT +G ++G + E +R+ K + + N + ++ + Sbjct: 435 YRMMTSRAEYRLLLRQDNADLRLTKLGYEVGLVDE---ERYQKLLDKENMIEEEIRRVEH 491 Query: 482 --VLTSKNLSSTSISFKQDGKTR--TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 + TS+ + S S+ T T E + P+ S + L I ++ V E++ Sbjct: 492 TNIGTSEEVQSLLESYGSTPLTSGTTLAELIRRPELSYEALAPIDRQRKELPFDVEEQVN 551 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I Y Y RQ + ++ K E R+IP D DY+ + +L E K+KL+ ++P ++ QAS+ Sbjct: 552 INIKYDGYIRRQQRQVEQFKKLETRIIPDDLDYNDVKSLRIEAKQKLTEMRPSSIGQASR 611 Query: 598 IEGMTPAALNLLLIYIK 614 I G++PA +++LL+Y++ Sbjct: 612 ISGVSPADISVLLVYLE 628 >gi|284005465|ref|NP_001164763.1| protein MTO1 homolog, mitochondrial [Oryctolagus cuniculus] gi|217030840|gb|ACJ74004.1| mitochondrial translation optimization 1 homolog isoform a (predicted) [Oryctolagus cuniculus] Length = 678 Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust. Identities = 283/630 (44%), Positives = 411/630 (65%), Gaps = 25/630 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DV+VIGGGHAG EAAA AA+ G+ T L+TH+ TIG MSCNP+ GG+GKGHL+RE+DAL Sbjct: 37 FDVVVIGGGHAGTEAAAAAARCGSRTLLLTHRVDTIGQMSCNPSFGGIGKGHLMREVDAL 96 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGL R+ D +G+ ++VLN +KGPAV G R Q DR+LY+ MQ+EIL+ L V +G V Sbjct: 97 DGLCSRICDQSGVHYKVLNRRKGPAVWGLRAQIDRKLYKQNMQKEILNTPLLTVQEGAVE 156 Query: 126 GF--------NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 + K +S +V+ D S + +V+LTTGTFLRG + IG PAGR+GD Sbjct: 157 DLILSEPEPEHPGKCRVSGVVLVDGSTVYADSVILTTGTFLRGTVVIGLEMHPAGRLGDQ 216 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR- 236 PS L + K F GRLKTGTP R+ ++I + KQ D+ PFSF+ + + + Sbjct: 217 PSIGLAQTLEKLGFAVGRLKTGTPPRIAKESINFSILNKQTPDDPPKPFSFINETVWIKP 276 Query: 237 --QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 Q+ C +T TN + I++EN+ ++ + GPRYCPSIE K++RF R HQ++ Sbjct: 277 EDQLPCYMTHTNPKVDEIVLENLHLNSHVKETTR--GPRYCPSIESKVLRFPNRL-HQVW 333 Query: 295 LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT 354 LEPEGL++D++YP G+S LP E+Q + I I GLEK +I+PGY ++YDY++P+++ P+ Sbjct: 334 LEPEGLDSDLIYPQGLSVTLPAELQEKMIACIRGLEKAKMIQPGYGVQYDYLDPRQISPS 393 Query: 355 LETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDD 414 LET + LF AGQINGTTGYEEAAAQG++AGIN++ + ++ SRT+ YIGV+IDD Sbjct: 394 LETHLVQRLFFAGQINGTTGYEEAAAQGVIAGINASLRVSRKPPFVVSRTEGYIGVLIDD 453 Query: 415 LTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGM-KLGCIGERRQKRFAKYIQEYNF 473 LT+ G EPYRMFTSR E+R+SLRPDNAD+RLT G + GC+ ++R +R Sbjct: 454 LTTLGTSEPYRMFTSRVEFRLSLRPDNADSRLTFRGYEEAGCVSQQRYERACWMKSSLEE 513 Query: 474 LRSLLKSLVLTS----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA-RKF 528 S+LKS+ +S + + SIS + +A + L + + +++L + PD +K+ Sbjct: 514 GISVLKSIEFSSYKWKQLIPEASISITKSHPV-SALDVLKHEEVDMESLAKVVPDLFKKY 572 Query: 529 SSL--VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLP--ALSNELKEKL 584 + + ERL+IE++Y + Q+ E KE++ +E +PKD DY ++ +LS E++EKL Sbjct: 573 TQCRELAERLKIEAAYESVVFHQLQEIKEVQRDETLQLPKDLDYLTIKDVSLSQEVREKL 632 Query: 585 SILKPFNLLQASKIEGMTPAALNLLLIYIK 614 +P + AS+I G+TPAA+ LL ++K Sbjct: 633 HFSRPQTIGAASRIPGVTPAAIVNLLRFVK 662 >gi|78356852|ref|YP_388301.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|123552447|sp|Q310P0|MNMG_DESDG RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|78219257|gb|ABB38606.1| glucose inhibited division protein A [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 628 Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust. Identities = 270/614 (43%), Positives = 363/614 (59%), Gaps = 3/614 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D++V+G GHAGCEAA +A+LG T L+T IG +SCNPAIGGL KGH+V+EIDAL Sbjct: 12 FDLVVVGAGHAGCEAAMASARLGLKTLLLTINADRIGHLSCNPAIGGLAKGHMVKEIDAL 71 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+MG AD AGIQFR+LN KGPAV R Q DR+ Y A+QR++ Q+NL V Q Sbjct: 72 GGMMGLWADEAGIQFRLLNTSKGPAVHSTRAQIDRDAYMKAVQRDVFRQDNLWVWQDTAE 131 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + R V +T GTF+ G+IH+G GR+GD + L S Sbjct: 132 NVLVENGRAAGVSTLLGQEFRSRAVCVTAGTFMSGLIHVGLTHFSGGRLGDPAAQGLSAS 191 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + GRLKTGT RL +I +D +Q D PFSF + Q+ C +T T Sbjct: 192 LRAVGLELGRLKTGTTPRLLRDSINFDVMVEQPGDNPPRPFSFRSRHARMPQVPCYLTWT 251 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N TH I S +++G I G RYCPSIEDKI RF +++ HQIF+EPEGL++ V Sbjct: 252 NEATHEAIRAGFDRSPMFTGIISGTGARYCPSIEDKIARFPDKDRHQIFIEPEGLHSPEV 311 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YP GI T+LP ++Q I TIPGLEK I+RPGYAIEYDY NP +L PTLETK + GL++ Sbjct: 312 YPGGIPTSLPLDVQKAMIATIPGLEKAQIVRPGYAIEYDYANPTQLKPTLETKVLPGLWM 371 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ+NGT+GYEEAAAQGL A +N L R ++Y+ V++DDL +KG LEPYR Sbjct: 372 AGQVNGTSGYEEAAAQGLWAALNIFCGLRGLPAFIPGRDEAYMAVLVDDLVTKGTLEPYR 431 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF-AKYIQEYNFLRSLLKSLVLT 484 MFTSRAE+R+ LR +NAD+RLTP G LG + + + + + AK L L V Sbjct: 432 MFTSRAEHRLLLRENNADSRLTPAGRSLGLVDDAQWQLYTAKKTALEQLLAELDARQVRP 491 Query: 485 SKNLSSTSISFKQDGKTRTA--YEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSY 542 + + TR+ + L P I +L + + F++ V+E Q Y Sbjct: 492 DAATRDIFVHMNEAVPTRSVSLADLLRRPALGITDLQAFGLETDGFAADVLEEAQTIVKY 551 Query: 543 AAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMT 602 + Y RQ E +I + DY+++ L+ E EKLS ++P L QA++I G+T Sbjct: 552 SGYLKRQEELVLRTARHESVVISEAADYAAVHGLTREAVEKLSKVRPRTLGQAARISGIT 611 Query: 603 PAALNLLLIYIKKN 616 PAAL+ + +Y+KKN Sbjct: 612 PAALSCIEVYLKKN 625 >gi|17231053|ref|NP_487601.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Nostoc sp. PCC 7120] gi|21263666|sp|Q8YR87|MNMG_NOSS1 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|17132694|dbj|BAB75260.1| glucose inhibited division protein A [Nostoc sp. PCC 7120] Length = 640 Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust. Identities = 263/618 (42%), Positives = 377/618 (61%), Gaps = 11/618 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+G GH+GCEAA A+LG T L+T I CNPA+GG K L E+DA Sbjct: 12 AFDVIVVGAGHSGCEAALATARLGCRTLLLTLNLDKIAWQPCNPAVGGPAKSQLTHEVDA 71 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDV----I 120 L G +G++AD +Q R+LN +GPAV R Q D+ Y M+ + +QENL + + Sbjct: 72 LGGEIGKMADRTYLQKRILNSSRGPAVWALRAQTDKREYAAIMKNIVENQENLSIRESMV 131 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 V G N E + + +C V+LTTGTFL G I +G +PAGR G+ + Sbjct: 132 TDLVLGANDE---VIGVETYFGVAFQCKAVILTTGTFLGGKIWVGNKSMPAGRAGEFAAE 188 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIE 239 L + + F+TGRLKTGTPAR+D +++ + K + Q D + FSF D R Q+ Sbjct: 189 GLTETLNRLGFETGRLKTGTPARVDKRSVDYSKMQLQPGDAEVRWFSFDPDVWVEREQLP 248 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +TRT ETHR+I EN+ S +Y G +++ GPRYCPSIEDKIVRF ++ HQIF+EPEG Sbjct: 249 CHMTRTTPETHRLIRENLHLSPVYGGWVEAKGPRYCPSIEDKIVRFVDKESHQIFIEPEG 308 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 + +Y G ST LPE +Q Q +R++PGLE ++RP YA+EYDY+ + +PTL TKK Sbjct: 309 RDIPELYIQGFSTGLPENLQLQMLRSLPGLENCVMLRPAYAVEYDYLPATQCYPTLMTKK 368 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I+GLF AGQ+NGTTGYEEAAAQG+VAGIN+AR + I F R SY+G ++DDL +K Sbjct: 369 IAGLFCAGQVNGTTGYEEAAAQGIVAGINAARFVRDEEMIVFPREHSYLGTLVDDLCTKD 428 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 + EPYRM TSR+EYR+ LR DNAD RLTP+G ++G I +RR + F + ++ + L Sbjct: 429 LREPYRMLTSRSEYRLLLRSDNADQRLTPLGREIGLIDDRRWQMFTRKQEQITGEKERLY 488 Query: 480 SLVLTSKNLSSTSISFKQDGKTR---TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 + + + +I+ + T + L P F +L + + E Sbjct: 489 ATRVKENDDVGKAIASNTQQAIKGSITLADLLRRPGFHYVDLDRYGLGNPELTPAEKEGA 548 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y+ Y RQ + ++I + +R +P D DY+++ LS E +EKL+ +KP + QA+ Sbjct: 549 EIDIKYSGYLARQQSQIEQIARQAQRQLPGDLDYTTVDTLSKEAREKLNKVKPLTIGQAA 608 Query: 597 KIEGMTPAALNLLLIYIK 614 +I G+ PA +N LLIY++ Sbjct: 609 RIGGVNPADINALLIYLE 626 >gi|255717599|ref|XP_002555080.1| KLTH0G00924p [Lachancea thermotolerans] gi|238936464|emb|CAR24643.1| KLTH0G00924p [Lachancea thermotolerans] Length = 682 Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust. Identities = 267/612 (43%), Positives = 387/612 (63%), Gaps = 29/612 (4%) Query: 31 TALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPA 90 T L+T IG+ SCNP++GG+GKG L+RE+DALDG+ +V D AGIQF++LN +G A Sbjct: 65 TVLVTPFLDKIGTCSCNPSMGGVGKGTLLREVDALDGVAPKVTDLAGIQFKMLNRSRGAA 124 Query: 91 VRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNI-------------ISSI 137 V GPR Q DRE+Y MQ+ + S NL + QG+V ++ + + + Sbjct: 125 VWGPRAQIDREIYLREMQKVLKSYANLTLYQGKVQDLVIDRQVAGEGKDSHQKHSTVVGV 184 Query: 138 VMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLK 197 +++D ++++ S VV+TTGTFL IHIG IPAGR+G+ S L + + F GRLK Sbjct: 185 ILEDGTLLKASKVVITTGTFLSAEIHIGAKSIPAGRIGEGASYGLSKTLDEAGFKLGRLK 244 Query: 198 TGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITRTNLETHRIIMEN 256 TGTPARLDG+TI ++ EKQ+ D P SFM + + + Q+ C T T E H + N Sbjct: 245 TGTPARLDGRTINFESLEKQYGDTPPNPMSFMNEDVAIKDQVLCYGTHTTPEVHEYLRSN 304 Query: 257 IKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPE 316 + + IK GPRYCPSIE KI+RF +++ H+I+LEPEGL++ VVYPNGIS ++PE Sbjct: 305 LHQAPHIRETIK--GPRYCPSIEAKIIRFADKSSHRIWLEPEGLDSHVVYPNGISNSMPE 362 Query: 317 EIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYE 376 +Q +F+R IPGLE+V I++P Y +EYDYI+P+ L +LE K + GL+LAGQINGTTGYE Sbjct: 363 NVQLKFMRMIPGLEQVEILQPAYGVEYDYIDPRSLAKSLEAKPVKGLYLAGQINGTTGYE 422 Query: 377 EAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRIS 436 EA AQG+ AGIN+ + R+D+Y+GV+IDDL +KGV EPYRMFTSR+E+RIS Sbjct: 423 EACAQGIFAGINAGLAHQGKPPLEILRSDAYLGVLIDDLITKGVEEPYRMFTSRSEFRIS 482 Query: 437 LRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQE---YNFLRSLLKSLVLTSKNLS-STS 492 +R DNAD RLTP+G G + + R+A YI + Y+ + + L + L++K + S Sbjct: 483 VRADNADFRLTPLGHAAGVVSD---NRYASYINQKALYSEIVTKLLNFELSAKRWNGSLG 539 Query: 493 ISFKQDGKTRTAYEFLSYPDFSIQNLFSICP----DARKFSSLVIERLQIESSYAAYTGR 548 + K R+A+E L + + L P D + V+ ++ +E YA + + Sbjct: 540 VPVADGAKNRSAWEMLRFNGIDLNTLGDKFPELGIDPSQIPKHVLLKIDVEGKYAPFIKK 599 Query: 549 QMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNL 608 Q K + +E L+P +FDYS LP+LS+E K L++++P + QA +I+G+TPA+L Sbjct: 600 QNQFIKAFQADEGMLLPPNFDYSILPSLSSECKTILNLVQPSTIGQARRIQGITPASLFE 659 Query: 609 L--LIYIKKNTV 618 L L+ K+N + Sbjct: 660 LYKLVRFKQNDL 671 >gi|78780152|ref|YP_398264.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prochlorococcus marinus str. MIT 9312] gi|123553639|sp|Q317W7|MNMG_PROM9 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|78713651|gb|ABB50828.1| glucose inhibited division protein A [Prochlorococcus marinus str. MIT 9312] Length = 662 Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust. Identities = 282/639 (44%), Positives = 387/639 (60%), Gaps = 27/639 (4%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 N S+D++VIGGGHAGCEAA +AKLG STAL T I CNPA+GG K LV E+ Sbjct: 8 NESFDIVVIGGGHAGCEAAITSAKLGFSTALFTINLDRIAWQPCNPAVGGPAKSQLVHEV 67 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENL----- 117 DAL G++G++AD IQ R+LN KGPAV R Q D+ Y M + + +NL Sbjct: 68 DALGGIIGKLADKTAIQKRILNASKGPAVWALRAQTDKREYSKKMIEILQNTDNLSLKEA 127 Query: 118 -----DVIQGEVAGFNTEKNI---ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKI 169 D+ + E G N++K + I + S +V++T GTFL G I IG + Sbjct: 128 MITELDIAKTEEIGLNSKKIVKKRIKGVRTFFGSYYSARSVIITAGTFLEGRIWIGNKSM 187 Query: 170 PAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM 229 AGR G+ + L + + T RLKTGTPAR+D ++II+D+ + Q + FSF Sbjct: 188 SAGRSGEQAAKGLTKNLHEIGIKTERLKTGTPARVDKRSIIFDELDAQPSTAADKYFSFD 247 Query: 230 TDKITNR-QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGER 288 + N Q+ C ITRT +TH++I +N+ + IY G I S GPRYCPSIEDKIV+F ++ Sbjct: 248 PNIKNNMPQVSCHITRTTTKTHQLIRDNLHLTPIYGGFIDSKGPRYCPSIEDKIVKFADK 307 Query: 289 NGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINP 348 HQIFLEPEG+NT +Y G ST LPE IQ + +RT+PGL + ++RP YA+EYDYI Sbjct: 308 ESHQIFLEPEGINTPEIYVQGFSTGLPENIQLELLRTLPGLSECKMLRPAYAVEYDYIPA 367 Query: 349 KELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYI 408 +L +LETK+I LF AGQINGTTGYEEAAAQGLVAG+N+ RK N+ D I F+R SYI Sbjct: 368 TQLQTSLETKEIEYLFSAGQINGTTGYEEAAAQGLVAGVNATRKLNEKDPIIFTRESSYI 427 Query: 409 GVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYI 468 G MI+DL +K + EPYR+ TSR+EYR++LR DNAD RLTP+G ++G I E KR+ Y Sbjct: 428 GTMINDLITKDLKEPYRVLTSRSEYRLTLRGDNADRRLTPLGYQIGLIDE---KRWWAYQ 484 Query: 469 QEYNFLR--------SLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS 520 ++ N L + LK+ SKN+ + S K G T T E L P+F +L Sbjct: 485 EKMNLLEEEKLRLNNTRLKNTDEISKNIELDTGS-KIKGST-TLKELLKRPNFHYSDLIK 542 Query: 521 ICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNEL 580 + S + E ++I+ Y Y RQ ++I + + +P++ +Y + LS E Sbjct: 543 YNLTEKNLGSSIQEGVEIDIKYEGYLKRQKNNIEQINRQSCKSLPQEINYEKIDTLSLEA 602 Query: 581 KEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 +E L+ +KP N ASKI G++ A L LL+++K +K Sbjct: 603 RENLNKIKPKNFGDASKIPGVSKADLTALLVWLKIREIK 641 >gi|228478104|ref|ZP_04062715.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus salivarius SK126] gi|228250284|gb|EEK09537.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus salivarius SK126] Length = 633 Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust. Identities = 269/623 (43%), Positives = 383/623 (61%), Gaps = 12/623 (1%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 + ++DVIV+G GHAG EA+ AA++G L T + M CNP+IGG KG +VREI Sbjct: 6 DENFDVIVVGAGHAGVEASLAAARMGCKVLLATINLEMLAFMPCNPSIGGSAKGIVVREI 65 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G MG+ D IQ ++LN KGPAVR R QAD+ LY + M+ + QENL + Q Sbjct: 66 DALGGEMGKNIDKTYIQMKMLNTGKGPAVRALRAQADKALYAMTMKHTVERQENLTLRQS 125 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 V E + + N VV+TTGT LRG I +G+LK +G S +L Sbjct: 126 MVDEILVEDGKVVGVRTATNQKYGAKAVVVTTGTALRGEIILGELKYSSGPNNSLASVTL 185 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIEC 240 ++ + GR KTGTP R+ +I +++TE Q DE+ FSF++ + QI C Sbjct: 186 ADNLRDLGLEIGRFKTGTPPRVKASSINYEETEIQPGDEKPNHFSFLSKDEDYLQDQIPC 245 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +T TN E+H II N+ + ++SG +K GPRYCPSIEDKIVRF ++N HQ+FLEPEG Sbjct: 246 WLTYTNQESHDIINNNLHRAPMFSGIVKGVGPRYCPSIEDKIVRFADKNRHQLFLEPEGR 305 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T+ VY G+ST+LPE++Q + I +I GLEK ++R GYAIEYD + P +L TLETK I Sbjct: 306 ETEEVYVQGLSTSLPEDVQKELIHSIKGLEKAEMMRTGYAIEYDIVLPHQLRATLETKLI 365 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 SGLF AGQ NGT+GYEEAA QGLVAGIN+A K + R+D+YIGVMIDDL +KG Sbjct: 366 SGLFTAGQTNGTSGYEEAAGQGLVAGINAALKVQGKPELILKRSDAYIGVMIDDLVTKGT 425 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYN-----FLR 475 LEPYR+ TSRAEYR+ LR DNAD RLTPIG ++G + + R F +++ + Sbjct: 426 LEPYRLLTSRAEYRLILRHDNADMRLTPIGREVGLVDDERWSIFEIKKNQFDSELTRLSK 485 Query: 476 SLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYP--DFSIQNLFSICPDARKFSSLVI 533 LK + T++ + ++ FK TA EF+ P D++ F + P A + +I Sbjct: 486 EKLKPIKETNEKIQ--ALGFKPLTDAMTAKEFMRRPEIDYATATQF-VGPAAEDLDAKII 542 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E L+ E Y Y + + + ++K E++ IPK+ D+ ++ +++ E ++K + P + Sbjct: 543 ELLETEIKYEGYINKALDQVAKMKRMEEKRIPKNIDWDAIDSIATEARQKFKKINPETIG 602 Query: 594 QASKIEGMTPAALNLLLIYIKKN 616 QAS+I G+ PA +++L++Y++ N Sbjct: 603 QASRISGVNPADISILMVYLEGN 625 >gi|322374003|ref|ZP_08048537.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus sp. C150] gi|321276969|gb|EFX54040.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus sp. C150] Length = 633 Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust. Identities = 268/620 (43%), Positives = 382/620 (61%), Gaps = 12/620 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IVIG GHAG EA+ AA++G L T + M CNP+IGG KG +VREIDAL Sbjct: 9 YDIIVIGAGHAGVEASLAAARMGCKVLLATINLEMLAFMPCNPSIGGSAKGIVVREIDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ D IQ ++LN KGPAVR R QAD+ LY + M+ + QENL + Q + Sbjct: 69 GGEMGKNIDKTYIQMKMLNTGKGPAVRALRAQADKALYAMTMKHTVERQENLTLRQSMID 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + N VV+TTGT LRG I +G+LK +G S +L ++ Sbjct: 129 DILVEDGKVVGVRTATNQKYGAKAVVVTTGTALRGEIILGELKYSSGPNNSLASVTLADN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 K + GR KTGTP R+ +I +++TE Q DE+ FSF++ + QI C +T Sbjct: 189 LKKLGLEIGRFKTGTPPRVKASSINYEETEIQPGDEKPNHFSFLSKDEDYLQDQIPCWLT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN E+H II N+ + ++SG +K GPRYCPSIEDKIVRF ++N HQ+FLEPEG T+ Sbjct: 249 YTNQESHDIINNNLHRAPMFSGIVKGVGPRYCPSIEDKIVRFADKNRHQLFLEPEGRETE 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE++Q + + +I GLEK ++R GYAIEYD + P +L TLETK ISGL Sbjct: 309 EVYVQGLSTSLPEDVQKELLHSIKGLEKAEMMRTGYAIEYDIVLPHQLRATLETKLISGL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ NGT+GYEEAA QGLVAGIN+A K + R+D+YIGVMIDDL +KG LEP Sbjct: 369 FTAGQTNGTSGYEEAAGQGLVAGINAALKVQGKPELILKRSDAYIGVMIDDLVTKGTLEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYN-----FLRSLL 478 YR+ TSRAEYR+ LR DNAD RLTPIG ++G + + R F +++ + L Sbjct: 429 YRLLTSRAEYRLILRHDNADMRLTPIGREVGLVDDERWNIFEIKKNQFDSELTRLSKEKL 488 Query: 479 KSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYP--DFSIQNLFSICPDARKFSSLVIERL 536 K + T++ + ++ FK TA EF+ P D++ F + P + + +IE L Sbjct: 489 KPVKETNEKIQ--ALGFKPLTDAMTAKEFMRRPEIDYATATQF-VGPASEDLDAKIIELL 545 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 + E Y Y + + + ++K E++ IPK+ D+ ++ +++ E ++K + P + QAS Sbjct: 546 ETEIKYEGYINKALDQVAKMKRMEEKRIPKNIDWDAIDSIATEARQKFKKINPETIGQAS 605 Query: 597 KIEGMTPAALNLLLIYIKKN 616 +I G+ PA +++L++Y++ N Sbjct: 606 RISGVNPADISILMVYLEGN 625 >gi|295090267|emb|CBK76374.1| glucose-inhibited division protein A [Clostridium cf. saccharolyticum K10] gi|295115465|emb|CBL36312.1| glucose-inhibited division protein A [butyrate-producing bacterium SM4/1] Length = 641 Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust. Identities = 270/622 (43%), Positives = 381/622 (61%), Gaps = 11/622 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +YD+ V+G GHAGCEAA AA+LG T + T +I M CNP IGG KGHLVRE Sbjct: 4 LEETYDIAVVGAGHAGCEAALAAARLGMETVVFTVSVDSIALMPCNPNIGGSSKGHLVRE 63 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DAL G MG+ D IQ ++LN KGPAV R QAD+E+Y M+R + + E+L + Q Sbjct: 64 LDALGGEMGKNIDKTFIQSKMLNQSKGPAVHSLRAQADKEMYTREMRRVLENTEHLTIKQ 123 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 EV E+ ++ I ++ C VVL TGT+LR G + P G G +N Sbjct: 124 AEVTEILAEEGRVTGIRTLSGAVYHCRAVVLATGTYLRARCIYGDVSNPTGPNGLQAANH 183 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KITNRQIE 239 L +S + R KTGTPAR+D ++I + K E+QF D+R++PFSF TD + Q+ Sbjct: 184 LTDSLKALGIEMYRFKTGTPARVDRRSIDFSKMEEQFGDDRVVPFSFTTDPESVQKEQVS 243 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +T TN TH II EN+ S ++SG I+ GPRYCPSIEDK+V+F ++ HQ+F+EPEG Sbjct: 244 CWLTYTNERTHEIIRENLDRSPLFSGAIEGTGPRYCPSIEDKVVKFPDKERHQVFVEPEG 303 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T+ +Y G+S++LPE++Q RT+PGLE V I+R YAIEYD IN ++L TLE K Sbjct: 304 LYTNEMYLGGMSSSLPEDVQTAMYRTVPGLEHVKIVRNAYAIEYDCINSRQLRATLEFKA 363 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF GQ NG++GYEEAA QG +AG+N+ARK + I R+ +YIGV+IDDL +K Sbjct: 364 IEGLFSGGQFNGSSGYEEAAVQGFMAGVNAARKLQGKEGIVLDRSQAYIGVLIDDLVTKE 423 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRM TSRAEYR+ LR DNAD RL+ IG ++G I + R +R + Q+ +R ++ Sbjct: 424 SHEPYRMMTSRAEYRLLLRQDNADLRLSGIGHEIGLIDDERYERVLRKEQQ---IREEVE 480 Query: 480 SLVLTSKNLS-STSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVI 533 L T + K G T T E + P+ S + + I P V Sbjct: 481 RLNRTPVGATHEVQECLKSYGSTELKTGSTLAELVRRPELSYEAVKEIDPKRPVLDWDVA 540 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E++ I Y Y RQ+ + + K E R + + FDYS++ +L E +KL++ KP N+ Sbjct: 541 EQVNINIKYEGYIKRQLQQVAQFKKMESRKLDESFDYSTVKSLRKEAVQKLNLYKPRNIG 600 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I G++PA +++LL+++++ Sbjct: 601 QASRISGVSPADISVLLVHLEQ 622 >gi|148261392|ref|YP_001235519.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Acidiphilium cryptum JF-5] gi|205831483|sp|A5G168|MNMG_ACICJ RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|146403073|gb|ABQ31600.1| glucose inhibited division protein A [Acidiphilium cryptum JF-5] Length = 576 Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust. Identities = 262/453 (57%), Positives = 327/453 (72%), Gaps = 1/453 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DV+VIGGGHAG EAAA AA++GA TAL+TH+ IG MSCNPAIGG+GKGHLVREIDAL Sbjct: 8 FDVVVIGGGHAGTEAAAAAARMGARTALLTHRRDRIGEMSCNPAIGGIGKGHLVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DG+MGR ADAA I F++LN KGPAV GPR QADR LYR A+Q + +Q+ L +++GE A Sbjct: 68 DGVMGRAADAACIHFKMLNRSKGPAVWGPRAQADRGLYRAAVQALLAAQDGLTILEGEAA 127 Query: 126 GFN-TEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 T +++++ I C VLTTGTFLRGV+H G+ GR+GD+ SN+L Sbjct: 128 DLELTADGALAAVITGAGGRIACRAAVLTTGTFLRGVLHFGERTEEGGRVGDAASNALSA 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 GRLKTGTPARLD ++I W+ + + PFS +T +I N QI C I+ Sbjct: 188 RLRGLGLALGRLKTGTPARLDRRSIDWEALPEDRGEAEPAPFSLLTGRIANPQISCRISE 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETH II N+ SA+Y G I GPRYCPSIEDK+VRF ER HQ+FLEPEGL + Sbjct: 248 TTPETHAIINANLHRSAVYGGRIDGAGPRYCPSIEDKVVRFAERPRHQVFLEPEGLEDET 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LPEE+Q FIRT+PGL + ++RPGYA+EYDY++P+EL L KK+ GLF Sbjct: 308 VYPNGISTSLPEEVQEAFIRTMPGLSRAVLLRPGYAVEYDYVDPRELTHALALKKVPGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEA AQGL+AG+N+A + + R + YIGV++DDL ++GV EPY Sbjct: 368 LAGQINGTTGYEEAGAQGLLAGVNAALVAAGRSMVTVRRHEGYIGVLVDDLVTRGVSEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIG 457 RMFTSRAE+R+SLR DNAD RLTP G+ GC+G Sbjct: 428 RMFTSRAEHRLSLRADNADLRLTPRGLDWGCVG 460 Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 36/62 (58%) Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y RQ E + ++ LIP DFD+S + LS E++ +L ++P L A ++EGM Sbjct: 497 YEGYLTRQESEIRARAKDDAVLIPPDFDFSVVGGLSAEIRARLERVRPETLGVAGRLEGM 556 Query: 602 TP 603 TP Sbjct: 557 TP 558 >gi|254457357|ref|ZP_05070785.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Campylobacterales bacterium GD 1] gi|207086149|gb|EDZ63433.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Campylobacterales bacterium GD 1] Length = 631 Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust. Identities = 269/631 (42%), Positives = 387/631 (61%), Gaps = 24/631 (3%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVI+IGGGHAG EAA +A++G T +I+ +G+ SCNPAIGGL KGHLVRE+DA Sbjct: 6 NYDVIIIGGGHAGVEAALASARMGNKTLMISMLAENVGATSCNPAIGGLAKGHLVRELDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG + D AGIQFR+LN KGPAVRG R Q D + YR+ + +L+ NL + Q V Sbjct: 66 LGGEMGLITDEAGIQFRILNQTKGPAVRGSRAQIDMDKYRIIARNVVLNTPNLHLAQETV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + + + + V++T+GTFL G+IH+G+++ GR G+ S L + Sbjct: 126 ESLIIEDSTVKGVKTDLLNEYKAKKVIVTSGTFLNGIIHVGEVQKKGGRYGEERSEGLSD 185 Query: 185 SFMKFD--FDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK----ITNRQI 238 S +K D + RLKTGT AR+D TI + E+Q DE PFSF TD+ + +Q+ Sbjct: 186 S-LKNDCGLNLSRLKTGTCARIDSSTIDFSVMEEQGGDELPSPFSFRTDREEFRASKKQL 244 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C I TN TH II N + +++G I PRYCPSIEDK+ +F +++ H +F+EP+ Sbjct: 245 PCFIAYTNELTHEIISSNFYRAPLFTGQIAGKSPRYCPSIEDKVSKFADKDRHHLFIEPQ 304 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 ++ Y NG+ST+LP E+Q I+++ GLE I+R GYAIEYD+++P+EL +LETK Sbjct: 305 TMDNTECYINGLSTSLPPEVQRDMIKSVKGLENAKIVRYGYAIEYDFVDPRELKHSLETK 364 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 KI GL+LAGQINGTTGYEEAAAQGL+AGIN++ + + + R ++YIGV+IDDL +K Sbjct: 365 KILGLYLAGQINGTTGYEEAAAQGLMAGINASLSLQEKEPLVLRRDEAYIGVLIDDLVTK 424 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGC----------IGERRQKRFAKYI 468 G EPYRMFTSRAEYR+ LR ++AD RL+ G +LG I +++ K A + Sbjct: 425 GTNEPYRMFTSRAEYRLLLREESADTRLSRYGHELGLLSDEMYEKVQIKDKQIKDGALLL 484 Query: 469 QEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF 528 +E F + K + +++ I TA + ++ F + + I P+ K+ Sbjct: 485 EETKFTPN--KEFIAFLESMGEVPIK-----DISTAQQLVARKSFDVHKMIKIVPELDKY 537 Query: 529 SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 + E + +E YA Y +Q E + +K K IP+ FD+ + LS E+ EKL + Sbjct: 538 DDYIKEEILVEGKYARYIDKQSEEIQRMKKYLKIAIPEGFDFKGVSGLSKEIVEKLEMFN 597 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 P L A +I G+TPAA+ +L IYI+ + K Sbjct: 598 PPTLQSAMQISGITPAAIEILHIYIRMASKK 628 >gi|312864127|ref|ZP_07724362.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus vestibularis F0396] gi|311100359|gb|EFQ58567.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus vestibularis F0396] Length = 633 Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust. Identities = 271/624 (43%), Positives = 386/624 (61%), Gaps = 14/624 (2%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 + ++DVIV+G GHAG EA+ AA++G L T + M CNP+IGG KG +VREI Sbjct: 6 DENFDVIVVGAGHAGVEASLAAARMGCKVLLATINLEMLAFMPCNPSIGGSAKGIVVREI 65 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G MG+ D IQ ++LN KGPAVR R QAD+ LY + M+ + QENL + Q Sbjct: 66 DALGGEMGKNIDKTYIQMKMLNTGKGPAVRALRAQADKALYAMTMKHTVERQENLTLRQS 125 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 V E + + N VV+TTGT LRG I +G+LK +G S +L Sbjct: 126 MVDEILVEDGKVVGVRTATNQKYGAKAVVVTTGTALRGEIILGELKYSSGPNNSLASVTL 185 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT---DKITNRQIE 239 ++ + + GR KTGTP R+ +I +++TE Q DE+ FSF++ D + + QI Sbjct: 186 ADNLKELGLEIGRFKTGTPPRVKASSINYEETEIQPGDEKPNHFSFLSKDEDYLLD-QIP 244 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +T TN E+H II N+ + ++SG +K GPRYCPSIEDKIVRF ++N HQ+FLEPEG Sbjct: 245 CWLTYTNQESHDIINNNLHRAPMFSGIVKGVGPRYCPSIEDKIVRFADKNRHQLFLEPEG 304 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 T+ VY G+ST+LPE++Q + I +I GLEK ++R GYAIEYD + P +L TLETK Sbjct: 305 RETEEVYVQGLSTSLPEDVQKELIHSIKGLEKAEMMRTGYAIEYDIVLPHQLRATLETKL 364 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 ISGLF AGQ NGT+GYEEAA QGLVAGIN+A K + R+D+YIGVMIDDL +KG Sbjct: 365 ISGLFTAGQTNGTSGYEEAAGQGLVAGINAALKVQGKPELILKRSDAYIGVMIDDLVTKG 424 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYN-----FL 474 LEPYR+ TSRAEYR+ LR DNAD RLTPIG ++G + + R F +++ Sbjct: 425 TLEPYRLLTSRAEYRLILRHDNADMRLTPIGREVGLVDDERWSIFEIKKNQFDSELTRLS 484 Query: 475 RSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYP--DFSIQNLFSICPDARKFSSLV 532 + LK + T++ + ++ FK TA EF+ P D++ F + P A + V Sbjct: 485 KEKLKPIKETNEKIQ--ALGFKPLTDAMTAKEFMRRPEIDYATATQF-VGPAAEDLDAKV 541 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 IE L+ E Y Y + + + ++K E++ IPK+ D+ ++ +++ E ++K + P + Sbjct: 542 IELLETEIKYEGYINKALDQVAKMKRMEEKKIPKNIDWDAIDSIATEARQKFKKINPETI 601 Query: 593 LQASKIEGMTPAALNLLLIYIKKN 616 QAS+I G+ PA +++L++Y++ N Sbjct: 602 GQASRISGVNPADISILMVYLEGN 625 >gi|291548775|emb|CBL25037.1| glucose-inhibited division protein A [Ruminococcus torques L2-14] Length = 630 Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust. Identities = 270/613 (44%), Positives = 378/613 (61%), Gaps = 5/613 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+V+G GHAGCEAA A+LG T + T +I M CNP IGG KGHLVRE+DAL Sbjct: 15 YDVVVVGAGHAGCEAALATARLGFKTVIFTVSVDSIALMPCNPNIGGSSKGHLVRELDAL 74 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+V D IQ ++LN KGPAV R QAD+ Y M++ + +QENLD+ Q EV Sbjct: 75 GGEMGKVIDQTFIQSKMLNSSKGPAVHSLRAQADKANYSKTMRQVLQNQENLDIRQMEVT 134 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E I+ + ++ RC VVL TGT+L+ G++ G G +N L +S Sbjct: 135 EILAEDGKITGVQTYSGAIYRCKAVVLCTGTYLKARCIYGEISTHTGPNGLQSANYLTDS 194 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KITNRQIECGIT 243 R KTGTPAR+D TI + K ++Q DER++PFSF TD + Q C +T Sbjct: 195 LKALGIKMYRFKTGTPARIDKNTIDFSKMQEQKGDERVVPFSFTTDPESVQIDQASCWLT 254 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II N+ S +YSG I+ GPRYCPSIEDK+V+F ++N HQ+F+EPEGL T+ Sbjct: 255 YTNETTHEIIRGNLDRSPLYSGAIEGTGPRYCPSIEDKVVKFPDKNRHQVFIEPEGLETN 314 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G+S++LPE++Q+ R++PGLE I+R YAIEYD I+ ++L TLE K+I GL Sbjct: 315 EMYVGGMSSSLPEDVQYAMYRSVPGLEHAKIVRNAYAIEYDCIDARQLKSTLEFKEIEGL 374 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F GQ NG++GYEEAA+QGL+AGIN+ARK + I R+ YIGV+IDDL +K EP Sbjct: 375 FSGGQFNGSSGYEEAASQGLIAGINAARKLQGKEGIVIDRSQGYIGVLIDDLVTKESHEP 434 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR-QKRFAKYIQEYNFLRSLLKSLV 482 YRM TSRAEYR+ LR DNAD RLT IG ++G I E R QK K + + + V Sbjct: 435 YRMMTSRAEYRLLLRQDNADMRLTKIGYEVGLIDEERYQKLLKKEEMIEKEIERVEHTNV 494 Query: 483 LTSKNLSSTSISFKQDGKTR--TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 T++ + + S++ T T E + P+ S + + I + V E++ I Sbjct: 495 GTTEAVQALLESYESTPLTSGTTLAELIRRPELSYEKIAPIDKHREELPYDVKEQVDINI 554 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQM + ++ K E + IP++ +Y + +L E K+KL+ ++P ++ QAS+I G Sbjct: 555 KYDGYIKRQMRQVEQFKKLENKRIPENINYDEIQSLRLEAKQKLNQIRPSSIGQASRISG 614 Query: 601 MTPAALNLLLIYI 613 ++PA +++LL+Y+ Sbjct: 615 VSPADVSVLLVYL 627 >gi|15225046|ref|NP_178974.1| glucose-inhibited division family A protein [Arabidopsis thaliana] gi|4733959|gb|AAD28643.1| similar to glucose inhibited division protein A from prokaryotes [Arabidopsis thaliana] gi|330251139|gb|AEC06233.1| glucose-inhibited division family A protein [Arabidopsis thaliana] Length = 723 Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust. Identities = 267/625 (42%), Positives = 386/625 (61%), Gaps = 6/625 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAGCEAA +A+LGAST L+T I CNPA+GG K LV E+DA Sbjct: 72 TYDVIVVGAGHAGCEAALASARLGASTLLLTLNLDRIAWQPCNPAVGGPAKSQLVHEVDA 131 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G +G+VAD +Q R+LNV +GPAVR R Q D+ Y M++ + S ENL + + V Sbjct: 132 LGGDIGKVADRCYLQKRILNVSRGPAVRSLRAQTDKREYATEMKKIVDSTENLCIREAMV 191 Query: 125 AGFNTEKNI-ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 KN + + +V+LTTGTF+ G I +GK +PAGR G+S S L Sbjct: 192 TDIIVGKNDNVEGVATFFGMNFYAPSVILTTGTFMSGKIWVGKKSMPAGRAGESASQGLT 251 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + K F+T RLKTGTPAR+D +TI + E Q DE + FSF D I Q+ C + Sbjct: 252 ENLQKLGFETDRLKTGTPARVDRRTIDFSNLEAQHGDEEVSWFSFDPDFHIEREQMCCYL 311 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 TRT TH++I +N+ + Y G +++ GPRYCPSIEDKIVRF ++ HQIFLEPEG + Sbjct: 312 TRTTKITHQLIRDNLHETPTYGGWVEAKGPRYCPSIEDKIVRFKDKESHQIFLEPEGRDV 371 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +Y G ST LPE +Q +R++PGLE +++RP YA+EYDY+ + +L TKKI G Sbjct: 372 PEIYVQGFSTGLPENLQLPLLRSLPGLENCSMLRPAYAVEYDYLPAHQCSRSLMTKKIEG 431 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF +GQINGTTGYEEAAAQG+++GIN+AR ++ + R SYIG +IDDL +K + E Sbjct: 432 LFFSGQINGTTGYEEAAAQGIISGINAARHADGKKHVVLERESSYIGTLIDDLVTKDLRE 491 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR----QKRFAKYIQEYNFLRSLL 478 PYRM TSR+E+R+ LR DNAD+RLTP+G +LG I +RR Q++ A+ +E L+++ Sbjct: 492 PYRMLTSRSEHRLLLRFDNADSRLTPLGRELGLIDDRRWKLYQEKQARISEEKKRLKTVK 551 Query: 479 KSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 S+ + +S+S + ++ T L P + L S + + ++I Sbjct: 552 ISVAVGDLAAEVSSVSSQPVKESATLESLLKKPHIHYKLLEKHGFGNETLSRMEKDCVEI 611 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + Y + RQ + +++ ++ R +P D DY S+ LS+E +EKLS ++P + QAS++ Sbjct: 612 DIKYEGFIVRQQNQLQQMVHQQHRRLPDDLDYYSMTTLSHEGREKLSKVRPETIGQASRV 671 Query: 599 EGMTPAALNLLLIYIKKNTVKLNEI 623 G++PA + LLI ++ N + ++ Sbjct: 672 GGVSPADITALLITLESNRRRTQDV 696 >gi|332673056|gb|AEE69873.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Helicobacter pylori 83] Length = 621 Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust. Identities = 283/627 (45%), Positives = 377/627 (60%), Gaps = 16/627 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M+ S D++VIGGGHAG EA+ +AAK+GA LIT TIG SCNPAIGGLGKGHL + Sbjct: 1 MVKES-DILVIGGGHAGIEASLIAAKMGARVHLITMLIDTIGLASCNPAIGGLGKGHLTK 59 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+D L G MG + D +G+Q+RVLN KGPAVRG R Q D + YR+ + +L+ NL V Sbjct: 60 EVDVLGGAMGIITDNSGLQYRVLNASKGPAVRGTRAQIDMDTYRIFARNLVLNTPNLSVS 119 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q E + + + N+ + V++TTGTFL+GV+HIG + GR G++ SN Sbjct: 120 QEMTESLIIENDEVVGVRTNINNTYKAKKVIITTGTFLKGVVHIGTHQNQNGRFGENASN 179 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 SL + + F RLKTGT R+ G +I ++ E+ F D FS+ T Q+ C Sbjct: 180 SLALNLRELGFKVERLKTGTCPRVAGNSIDFEGLEEHFGDTTPPYFSYKTKDFNPTQLSC 239 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN TH+II +N + ++SG I+ GPRYCPSIEDKI RF E+ HQ+FLEP+ + Sbjct: 240 FITYTNPITHQIIRDNFHRAPLFSGQIEGIGPRYCPSIEDKINRFSEKERHQLFLEPQTI 299 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + Y NG+ST+LP ++Q + I +I GLE I R GYAIEYD+I P EL TLETKKI Sbjct: 300 HKSEYYINGLSTSLPLDVQEKVIHSIKGLENALITRYGYAIEYDFIQPTELTHTLETKKI 359 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GL+LAGQINGTTGYEEAAAQGL+AGIN+ D R ++YIGV+IDDL +KG Sbjct: 360 KGLYLAGQINGTTGYEEAAAQGLMAGINAVLALKNQDPFILKRNEAYIGVLIDDLVTKGT 419 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DN RL +LG + E K K QE LK Sbjct: 420 NEPYRMFTSRAEYRLLLREDNTLFRLGEHAYRLGLMEEDFYKELKKDQQEIQDHLKRLKE 479 Query: 481 LVLTS--------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV 532 VLT L I+ K DG + L+ F+++ + S + V Sbjct: 480 CVLTPSKEVLKRLNELDENPINDKVDGVS-----LLARNSFNLEKMRSFFSFLTPLNERV 534 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 +E+++IE Y Y +Q ++ K IPK+F + +P LS E EKL +P +L Sbjct: 535 LEQIKIECKYNIYIEKQHENIAKMDSMLKVSIPKNFVFKGIPGLSLEAVEKLEKFRPKSL 594 Query: 593 LQASKIEGMTPAALNLLLIYI--KKNT 617 +AS+I G+TPA L++L +YI +KN+ Sbjct: 595 FEASEISGITPANLDVLHLYIHLRKNS 621 >gi|157164575|ref|YP_001466158.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Campylobacter concisus 13826] gi|205831538|sp|A7ZBK0|MNMG_CAMC1 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|112800397|gb|EAT97741.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Campylobacter concisus 13826] Length = 620 Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust. Identities = 280/630 (44%), Positives = 378/630 (60%), Gaps = 39/630 (6%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 Y++IV+GGGHAG EA+ AA++G T LIT IG+ SCNPAIGGL KGHLV+EIDAL Sbjct: 3 YEIIVVGGGHAGIEASLAAARMGKQTLLITILAEQIGAASCNPAIGGLAKGHLVKEIDAL 62 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG DA GIQFRVLN KGPAVRG R Q D + YR+ M+ +L+ NL++ Q Sbjct: 63 GGQMGLTTDAVGIQFRVLNESKGPAVRGSRAQIDMDRYRVYMRNLLLNTPNLEISQEIAT 122 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 +E I+ + N+ V++TTGTFL G+IH+G K+ AGR+G+ + L +S Sbjct: 123 EILSENGEITGVKTHLNNTYNAKKVIITTGTFLNGLIHVGFNKLEAGRVGELSAKDLSSS 182 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + + GRLKTGT R+D KTI ++ EKQ D + + FSF T + Q+ C I T Sbjct: 183 LRELGLNLGRLKTGTCPRIDAKTINFEILEKQDGDAKPVAFSFRTKNFSPTQLPCYIAYT 242 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N TH II N + +++G I+ GPRYCPSIEDKI RFG+R+ H +F+EP+ L Sbjct: 243 NETTHEIIRSNFDKAPLFTGQIEGIGPRYCPSIEDKINRFGDRDRHHLFIEPQTLEATEY 302 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG ST+LP E+Q Q +R++ G E I+R GYAIEYDY+ P +L +LETKK+ GL+L Sbjct: 303 YINGFSTSLPYEVQVQMLRSVKGFENAKIVRHGYAIEYDYVEPTQLKHSLETKKVKGLYL 362 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEA AQGL+AGIN+A + + + R ++YIGV+IDDL +KG EPYR Sbjct: 363 AGQINGTTGYEEAGAQGLMAGINAALSLDNKEPLILRRDEAYIGVLIDDLVTKGTKEPYR 422 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGE----------RRQKRFAKYIQEYNFLR 475 MFTSRAEYR+ LR +NA RL G +LG + + R K +++ E Sbjct: 423 MFTSRAEYRLLLREENAILRLGGYGHELGLLDDETFNEIENIRRNLKEGLEFLNETQITP 482 Query: 476 S-----LLKSL--VLTSKNLSSTSI----SFKQDGKTRTAYEFLSYPDFSIQNLFSICPD 524 S LL SL S+N+S I SF + + F++ D S+ + + C Sbjct: 483 SKANLELLASLDEEPISQNVSLQKIVARKSFTAEKLRKLDERFVNLDDASMDQILTEC-- 540 Query: 525 ARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKL 584 Y Y Q + +++K IP++FD+ S+ LSNE+ EKL Sbjct: 541 ----------------KYQHYISEQKNQIEKMKDMMDVKIPENFDFRSISGLSNEVVEKL 584 Query: 585 SILKPFNLLQASKIEGMTPAALNLLLIYIK 614 P L AS+I G+TPAA+++L IYIK Sbjct: 585 EKFAPPTLFAASEISGITPAAIDILHIYIK 614 >gi|296329306|ref|ZP_06871807.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296153662|gb|EFG94479.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 633 Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust. Identities = 275/630 (43%), Positives = 381/630 (60%), Gaps = 21/630 (3%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +D+IV+GGGHAGCEAA +A++G TA+ T TIG MSCNP++GG K HL REID Sbjct: 2 QEFDIIVVGGGHAGCEAALASARMGMKTAIFTISLDTIGVMSCNPSLGGPAKSHLAREID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G MGR D IQ RVLN +KGPAVR R QAD+ Y M++ + +NL VIQG Sbjct: 62 ALGGEMGRNIDKTFIQIRVLNTRKGPAVRSLRAQADKMAYANEMKKTLEHTDNLSVIQGM 121 Query: 124 VAGFNTEKN----IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 V+ E+ II I +++ R V++ TGTFLRG+IHIG++ AGRMG+ S Sbjct: 122 VSELVVEEENGKKIIKGIKIREGLEYRAKAVIIATGTFLRGLIHIGEINFSAGRMGELSS 181 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADE-RLIPFSFMT---DKITN 235 L S K R KTGTP R+DG+TI + E+Q D+ +++ FS T D ++ Sbjct: 182 EELPLSLEKIGLKLERFKTGTPTRIDGRTIDYSVLEEQPGDKSQVLKFSNRTKDEDALSR 241 Query: 236 RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFL 295 RQI C I TN + H II + S +++G I+ GPRYCPSIEDKI R+ ++N H +FL Sbjct: 242 RQISCYIAHTNEKVHEIIRNAKERSPLFNGTIQGLGPRYCPSIEDKIFRYPDKNQHHLFL 301 Query: 296 EPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTL 355 E EG T+ +Y G+S++LP ++Q + ++ I G E I+R YAIEYDY+ P+E+ TL Sbjct: 302 EREGYETNEIYLGGLSSSLPVDVQEEMLKNIKGFENAKIMRYAYAIEYDYVPPEEIKYTL 361 Query: 356 ETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDL 415 E++ + LFLAGQINGT+GYEEA AQGL+AGIN+ RK + + R DSYIG +IDDL Sbjct: 362 ESRTVENLFLAGQINGTSGYEEAGAQGLMAGINAVRKLRNEEPVILDRADSYIGTLIDDL 421 Query: 416 TSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLR 475 SKG EPYRMFT+R+EYR+ LR DNAD RLT +G +LG + E +R K ++ + Sbjct: 422 VSKGTNEPYRMFTARSEYRLYLREDNADLRLTKLGYELGLVPEEEYQRVEKKKKDVKIIT 481 Query: 476 SLLKSLVLTSKNLSSTSISFK------QDGKTRTAYEFLSYPDFSIQNLFSICP-----D 524 +L + N I K +DG T E L P+ S +++ I D Sbjct: 482 EILAKTNVGPSNPRVNEILLKRRENPIKDGS--TLLELLRRPEVSFEDIKYISEEIRGID 539 Query: 525 ARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKL 584 + + +++I Y Y R + ++ K E + IP D DY L + E K+KL Sbjct: 540 LQGYDHDTTYQVEITVKYEGYINRALKMIEKHKSMENKKIPVDIDYDDLKTIPKEAKDKL 599 Query: 585 SILKPFNLLQASKIEGMTPAALNLLLIYIK 614 +KP N+ QAS+I G++PA + +LIY+K Sbjct: 600 KRIKPINIGQASRISGVSPADIQAILIYLK 629 >gi|242005272|ref|XP_002423494.1| glucose inhibited division protein A, putative [Pediculus humanus corporis] gi|212506598|gb|EEB10756.1| glucose inhibited division protein A, putative [Pediculus humanus corporis] Length = 644 Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust. Identities = 280/636 (44%), Positives = 396/636 (62%), Gaps = 24/636 (3%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 ++ YDVIV+GGGHAG EA A+++G ++ LITHK +IG MSCNP+ GG+GKGHL++ Sbjct: 16 FFSKKYDVIVVGGGHAGVEACCAASRMGVNSLLITHKKESIGEMSCNPSFGGIGKGHLMK 75 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ-ENLDV 119 E+DALDG+ R+ D G+ ++VLN KGPAV GPR Q DR+LY+ +Q E+ ++ NLDV Sbjct: 76 EVDALDGVCARICDLTGVHYKVLNKSKGPAVWGPRAQIDRKLYKKEIQNEVFNKTSNLDV 135 Query: 120 IQGEVAGF--NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 + V + E N +V + I TV+LTTGTFL I+IG PAGRMGD Sbjct: 136 MFTSVDDLLIDKESNSCLGVVTKLGDKILSKTVILTTGTFLNAQINIGLEVKPAGRMGDE 195 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR- 236 P+ L + + F GRLKTGTP RL +TI + +Q D PFSF+ K+ R Sbjct: 196 PAIPLAKTLERLKFSLGRLKTGTPPRLRKETIDFSVCIRQEPDNPSQPFSFLNKKVWIRP 255 Query: 237 --QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 QI C +T TN + +II +N+ + +I GPRYCPSIE K +RF R HQI+ Sbjct: 256 ENQIPCFLTHTNEKIGKIIADNMHLNRHVREEIN--GPRYCPSIESKYLRFN-RAQHQIW 312 Query: 295 LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT 354 LEPEGL++DV+YP G+S LPE++Q + + +PGLEK I++PGY +EYDY++P+EL P+ Sbjct: 313 LEPEGLDSDVIYPGGLSCTLPEDLQQKIVNELPGLEKAVIVQPGYGVEYDYVDPRELNPS 372 Query: 355 LETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDD 414 LET K+ LF AGQINGTTGYEEAAAQG++AGIN+A K +R++ YIGV+IDD Sbjct: 373 LETIKVPNLFFAGQINGTTGYEEAAAQGVIAGINAAAKCQGKPEFIVNRSEGYIGVLIDD 432 Query: 415 LTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFL 474 LT+ G EPYRMFTSRAE+R+ LRPDNAD RLT G +GC+ + R+ + N L Sbjct: 433 LTTLGTNEPYRMFTSRAEFRLYLRPDNADLRLTKKGYDIGCVS---KDRYELTLSVENIL 489 Query: 475 RSLLKSLVLTSKNLSSTS--ISFKQDGKTRTAYEFLSYP----DFSIQNLFSICPDARKF 528 +K L K++ S + + T +P + + L S+ A K Sbjct: 490 NETIKKLKSDFKSVYSWCDILKMNKSKNTEKVSAMQMFPSVRFNANFDELRSLSETAFKH 549 Query: 529 ---SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDY--SSLPALSNELKEK 583 +++ R+ +E+ Y + ++++E +E++ +E IP DY SL +S E + K Sbjct: 550 LPEDNILCHRILVEAIYESALEQELLEIEEVRKQESLKIPNSIDYFKESL-NMSLEERSK 608 Query: 584 LSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 LS+ KP + AS+I G+TPA++ LL Y++KN ++ Sbjct: 609 LSLAKPQTIAAASRIPGVTPASIIYLLKYVQKNALQ 644 >gi|167751435|ref|ZP_02423562.1| hypothetical protein EUBSIR_02431 [Eubacterium siraeum DSM 15702] gi|167655681|gb|EDR99810.1| hypothetical protein EUBSIR_02431 [Eubacterium siraeum DSM 15702] Length = 625 Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust. Identities = 275/614 (44%), Positives = 379/614 (61%), Gaps = 9/614 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAA AA+LG TA+ T I +M CNP IGG KG LVRE+D+L Sbjct: 7 YDVIVVGAGHAGCEAALAAARLGCKTAVFTLSLDAIANMPCNPCIGGSAKGQLVRELDSL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MGR ADA IQ R+LN KGPAV R Q+DR Y M+ + ENLD+ Q EV Sbjct: 67 GGEMGRAADATFIQSRMLNKGKGPAVHSLRVQSDRVKYHTFMKSVLEHTENLDIKQAEVT 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E I+ I + + V++TTGT+L G IHIG+L +G S + L S Sbjct: 127 EVCAENGKITGIKTRLGAFYPAGCVIITTGTYLGGKIHIGELNYQSGPDNVSAALQLTES 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 R KTGTPAR+ ++I + E+Q DE + PF F +++C +T T Sbjct: 187 LRNLGLSMRRFKTGTPARVHKRSIDFSVMEEQDGDEYITPFCFDNTFKLENKVKCYVTYT 246 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N ETHRII++N+ S +Y+G I+ GPRYCPSIEDKIVRF ++ HQ+F+EP GL+TD Sbjct: 247 NAETHRIILDNLDRSPLYAGRIQGVGPRYCPSIEDKIVRFSDKPRHQLFVEPMGLDTDEY 306 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+S++LPE++Q +F+RTI GLE V I+RP YAIEYD +P EL+PTLE KKISGLF Sbjct: 307 YLQGMSSSLPEDVQIKFLRTIKGLEHVEIMRPAYAIEYDCCDPLELYPTLEFKKISGLFG 366 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ N T+GYEEAAAQG++AG+N+A K + RT S+IG +IDDL +KG +EPYR Sbjct: 367 AGQFNCTSGYEEAAAQGVIAGMNAAMKIKGREQYIPDRTTSFIGTLIDDLVTKGCVEPYR 426 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRS----LLKSL 481 M TSR+EYR+ LR DNA++RL PIG K G I + R +RF ++ N L + + K+ Sbjct: 427 MMTSRSEYRLLLRQDNANDRLVPIGHKFGLISDERYQRF---LERKNILDNETSRIKKAT 483 Query: 482 VLTSKNLSSTSISFKQDGKTRTA--YEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + L+ S T+ E L P ++L +A + +I++L+I Sbjct: 484 IYPCEELNKMLESKGTSPITQGVKFIELLKRPQIDYRDLAQFDDNAPELEHDIIDKLEIN 543 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y Q + +++K E++ +P D DY ++ L E +EKL+ +P N+ QA +I Sbjct: 544 IKYEGYIKTQTEKIEQMKRLEEKQLPTDIDYKTISGLRLEAQEKLNKYRPLNIGQAGRIS 603 Query: 600 GMTPAALNLLLIYI 613 G+ PA +++LLI++ Sbjct: 604 GVNPADVSVLLIWL 617 >gi|317472411|ref|ZP_07931736.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Anaerostipes sp. 3_2_56FAA] gi|316900131|gb|EFV22120.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Anaerostipes sp. 3_2_56FAA] Length = 627 Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust. Identities = 271/616 (43%), Positives = 381/616 (61%), Gaps = 7/616 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD++V+G GHAGCEAA +A+LG T T +I M CNP IGG KGHLV+EIDAL Sbjct: 8 YDIVVVGAGHAGCEAALASARLGFKTICFTVSMDSIALMPCNPNIGGSSKGHLVKEIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG D IQ ++LN KGPAV R QAD+++Y +AM + + + +NL V QGEV Sbjct: 68 GGEMGVNIDKTYIQSKMLNRSKGPAVHSLRAQADKKMYSMAMTQTMGNTKNLTVRQGEVT 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 T+ ++ + ++ V+LTTGT+L+ G + G G +N L S Sbjct: 128 QILTQNGKVTGVKTYSGAVYHAKAVILTTGTYLKARCIYGDVSNETGPNGLQAANYLTQS 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 + R KTGTPAR+D +I ++K E+QF D++++PFSF + I QI C +T Sbjct: 188 LKDLGIEMRRFKTGTPARIDKNSIDFNKMEEQFGDDKIVPFSFTNTREDIQRDQISCWLT 247 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN ETH II ENI S ++SG I+ GPRYCPSIEDKIV+F ++N HQ+F+EPEG T+ Sbjct: 248 YTNEETHEIIRENIGRSPLFSGAIEGTGPRYCPSIEDKIVKFPDKNRHQVFIEPEGEYTN 307 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G+S++LPE++Q+ R++ GLE V IIR YAIEYD IN +L P+LE +KI GL Sbjct: 308 EMYVGGMSSSLPEDVQYAMYRSVTGLENVKIIRNAYAIEYDCINATQLKPSLEFRKIGGL 367 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ NG++GYEEAAAQGL+AGIN+AR + + R+ +YIGV+IDDL +K EP Sbjct: 368 FSAGQFNGSSGYEEAAAQGLIAGINAARMIQGKESLVLDRSQAYIGVLIDDLVTKETSEP 427 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF----AKYIQEYNFLRSLLK 479 YRM TSRAEYR+ LR DNAD RL+ IG ++G I E R + A+ +E N L + Sbjct: 428 YRMMTSRAEYRLLLRQDNADLRLSKIGYEMGLISEERYQNLLEKEARIEKEINRLSRVNV 487 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 ++L S S + + T E + P+ + L I PD ++ V E++ I Sbjct: 488 GASGKVQDLLSKCQSTELKS-SATMAELIRRPELTYDMLSPIDPDRPEYPEDVREQVNIN 546 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ+ + K+ K EK+ IP+ Y + L E +KLS ++P ++ QAS+I Sbjct: 547 IKYEGYIKRQLSQVKQFKRLEKKKIPEGIKYEDIGNLRIEAIQKLSKIRPASIGQASRIS 606 Query: 600 GMTPAALNLLLIYIKK 615 G++PA +++LLIY+++ Sbjct: 607 GVSPADISVLLIYLEQ 622 >gi|170756087|ref|YP_001783277.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium botulinum B1 str. Okra] gi|205831524|sp|B1IHR8|MNMG_CLOBK RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|169121299|gb|ACA45135.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium botulinum B1 str. Okra] Length = 625 Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust. Identities = 272/619 (43%), Positives = 390/619 (63%), Gaps = 15/619 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DV+VIG GHAGCEAA +A++G T + T +I M+CNP IGG KGHLVREIDAL Sbjct: 8 FDVVVIGAGHAGCEAALASARMGCKTLICTMNLDSIALMACNPNIGGTAKGHLVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG D IQ R+LN KGPAV R QAD++ Y M+ + +EN+ + Q EV Sbjct: 68 GGEMGINIDHTFIQSRMLNTSKGPAVHSLRAQADKKRYSERMKHLLEKEENVVLRQLEVI 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + E N + ++ ++ + ++L TGT+L+G I IG + +G G P+N L S Sbjct: 128 EIDVEDNEVKGVLTKNGAYFTTKAIILCTGTYLKGKIIIGDIIYSSGPSGLYPANDLSQS 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + + R KTGTPAR++ +++ + K +Q DE+++PFSF+ +K+ QI C +T T Sbjct: 188 LLNLGINLRRFKTGTPARINKRSVDFSKMIEQPGDEKIVPFSFIHNKLDKDQISCYLTYT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 + ETH+II ENI S +Y+G I+ GPRYCPSIEDKIVRF +++ HQIF+EPEG NT+ + Sbjct: 248 SEETHKIIHENIHRSPLYNGSIEGVGPRYCPSIEDKIVRFPDKDKHQIFIEPEGENTEEL 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+S++LPE++Q + R++PGLE I+R YAIEYD I+P++L TLE K I+GL+ Sbjct: 308 YVGGMSSSLPEDVQIKMYRSVPGLENAEILRTAYAIEYDCIDPQQLDLTLEFKNINGLYG 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ NG++GYEEAAAQGL+AGIN+ K + + + R+D+YIGV+IDDL +KG EPYR Sbjct: 368 AGQFNGSSGYEEAAAQGLIAGINAVLKIKEKNPLILKRSDAYIGVLIDDLVTKGTNEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 M TSRAEYR+ LR DNAD RLT +G K+G + E R +F + L+++ +T Sbjct: 428 MMTSRAEYRLLLRQDNADLRLTELGYKVGLVKEDRYNKFLNRKKNVENEIERLRNMQITG 487 Query: 486 KN------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV---IERL 536 K L S K K + YE + P+ + F + P K SL E + Sbjct: 488 KREINEFLLEKGSTELK---KPISLYELIKRPEL---DYFKVEPLDDKRPSLSDDEKEEI 541 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 I + Y Y +Q+ + ++ K E RLIPK +Y + L E +KL +KP N+ QAS Sbjct: 542 NIIAKYEGYINKQLEQVEQFKKYEDRLIPKSINYLDIKGLRLEAIQKLEKIKPINIGQAS 601 Query: 597 KIEGMTPAALNLLLIYIKK 615 +I G++PA +++LLIY+++ Sbjct: 602 RISGVSPADISVLLIYMER 620 >gi|153811976|ref|ZP_01964644.1| hypothetical protein RUMOBE_02369 [Ruminococcus obeum ATCC 29174] gi|149831875|gb|EDM86961.1| hypothetical protein RUMOBE_02369 [Ruminococcus obeum ATCC 29174] Length = 631 Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust. Identities = 260/623 (41%), Positives = 385/623 (61%), Gaps = 13/623 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + ++ D++V+G GHAGCEA+ A+LG T + T +I M CNP +GG KGHLV+E Sbjct: 6 LEKTCDIVVVGAGHAGCEASLACARLGLDTVMFTVSVDSIALMPCNPNVGGSSKGHLVKE 65 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DAL G MG+ D IQ ++LN KGPAV R QAD++ Y M++ + +QENL + Q Sbjct: 66 LDALGGEMGKNIDKTFIQSKMLNSSKGPAVHSLRAQADKQAYSTEMRKTLENQENLTIKQ 125 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 GEV E+ I+ + + ++ C VVL TGT+L+ G + G G +N Sbjct: 126 GEVTKLLVEEGKITGVQLYSGAVYHCQAVVLCTGTYLKARCIYGDVSNYTGPNGLQAANY 185 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KITNRQIE 239 L +S + + R KTGTPAR+ G TI + K E+QF DER++PFSF TD + +Q Sbjct: 186 LTDSLKELGIEMFRFKTGTPARIAGNTINYSKMEEQFGDERVVPFSFSTDPESVQIQQKS 245 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +T TN +TH II N+ S +YSG I+ GPRYCPSIEDK+VRF ++ HQ+F+EPEG Sbjct: 246 CWLTYTNEKTHEIIRNNLDRSPLYSGMIEGTGPRYCPSIEDKVVRFADKKRHQVFIEPEG 305 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T+ +Y G+S++LPE++Q + ++PGLE I++ YAIEYD INP++L+PTLE KK Sbjct: 306 LYTNEMYIGGMSSSLPEDVQDEMYHSVPGLEHAKIVKNAYAIEYDCINPRQLYPTLEFKK 365 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF GQ NG++GYEEAAAQGL+AGIN+A + + + R+++YIGV+IDDL +K Sbjct: 366 IKGLFSGGQFNGSSGYEEAAAQGLIAGINAAMEVKGREQLVLDRSEAYIGVLIDDLVTKE 425 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGE-------RRQKRFAKYIQEYN 472 EPYRM TSRAEYR+ LR DNAD RL G ++G I E R+++ K I+ Sbjct: 426 NHEPYRMMTSRAEYRLLLRQDNADLRLRKKGYQVGLIDEETYQAVLRKEEAIQKEIERTE 485 Query: 473 FLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV 532 + + K L + + G T E + P+ + ++L I + + V Sbjct: 486 --HATIGGTPEVQKLLEEKGSTLLKSGT--TIAELIRRPELNYEDLAPIDKERPELPWDV 541 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 ++++I Y Y RQ+ + ++ K E + IP+D DY + +L E ++KL +P ++ Sbjct: 542 KQQVEINLKYEGYIKRQLKQVEQFKKLEAKKIPEDLDYEKVGSLRIEARQKLEEYRPISI 601 Query: 593 LQASKIEGMTPAALNLLLIYIKK 615 QAS+I G++PA +++LL+Y+++ Sbjct: 602 GQASRISGVSPADISVLLVYLEQ 624 >gi|299820855|ref|ZP_07052744.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria grayi DSM 20601] gi|299817876|gb|EFI85111.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria grayi DSM 20601] Length = 641 Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust. Identities = 267/619 (43%), Positives = 379/619 (61%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAG EA + ++GA T ++T + M CNP++GG KG +VREIDA Sbjct: 19 NYDVIVVGAGHAGVEAGLASGRMGAKTLMLTINLDMVAFMPCNPSVGGPAKGVVVREIDA 78 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ M+ I +EN+ + QG V Sbjct: 79 LGGEMGRNTDKTYIQMRMLNTGKGPAVRALRAQADKWDYQHEMKHTIEKEENITLRQGLV 138 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ + TVV+TTGTF RG I +G+L+ +G PS L Sbjct: 139 EELIIEDGRCVGVITNSGAKYHAKTVVITTGTFSRGEIIVGELRYSSGPNNQQPSVKLSE 198 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F+ R KTGTP R+ +I + KTE+Q DE+ FS+ T + Q+ C +T Sbjct: 199 HLEELGFELRRFKTGTPPRVKSSSIDYTKTEEQPGDEQPQAFSYETVDMLVDQLPCWLTY 258 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH II N+ S +++ K G RYCPSIEDKIVRF ++ HQIFLEPEG NT+ Sbjct: 259 TNEQTHEIINANLHRSPMFTATKKGTGARYCPSIEDKIVRFSDKPRHQIFLEPEGRNTEE 318 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q + ++TIPGLE V ++R GYAIEYD + P +L+PTLETKK+ L+ Sbjct: 319 VYVQGLSTSLPEDVQREMLQTIPGLENVEMMRVGYAIEYDAVMPDQLWPTLETKKVENLY 378 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+ARK+ + + R ++YIGV+IDDL +KG EPY Sbjct: 379 TAGQINGTSGYEEAAGQGLMAGINAARKAMDKEPVILGRNEAYIGVLIDDLVTKGTEEPY 438 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF----AKYIQEYNFLRSL-LK 479 R+ TSRAEYR+ LR DNAD RLT IG ++G I + R F A E L+ + +K Sbjct: 439 RLLTSRAEYRLLLRHDNADLRLTEIGHEIGLISDERYAAFKEKQALIADEITRLKKVRIK 498 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 L+ + +DG A +FL P+ + + I P S + E+++I+ Sbjct: 499 PTKEVQILLTEMGANELKDGV--LAADFLRRPEITYPIIEQIVPRETSLSDEIKEQVEIQ 556 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + ++K E + IP++ DY ++ L+ E EKL ++P ++ QAS+I Sbjct: 557 IKYEGYIEKASAQVDKMKRMEDKKIPENIDYDAIGGLATEALEKLKKIEPLSIAQASRIS 616 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 617 GVNPADISILLVYIEQGKI 635 >gi|87126017|gb|ABD20531.1| glucose-inhibited division protein A [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87204224|gb|ABD32034.1| glucose inhibited division protein A, putative [Staphylococcus aureus subsp. aureus NCTC 8325] Length = 594 Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust. Identities = 268/592 (45%), Positives = 376/592 (63%), Gaps = 7/592 (1%) Query: 33 LITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVR 92 ++T I M CNP++GG KG +VREIDAL G M + D IQ R+LN KGPAVR Sbjct: 1 MLTINLDNIAFMPCNPSVGGPAKGIVVREIDALGGQMAKTIDKTHIQMRMLNTGKGPAVR 60 Query: 93 GPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVL 152 R QAD+ LY+ M+R I +ENL ++QG V E N + + + V++ Sbjct: 61 ALRAQADKVLYQQEMKRVIEDEENLHIMQGMVDELIIEDNEVKGVRTNIGTEYLSKAVII 120 Query: 153 TTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWD 212 TTGTFLRG I +G +K +G PS +L ++ + FD R KTGTP R++ KTI + Sbjct: 121 TTGTFLRGEIILGNMKYSSGPNHQLPSITLSDNLRELGFDIVRFKTGTPPRVNSKTIDYS 180 Query: 213 KTEKQFADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGP 272 KTE Q D+ FSF T + Q+ C +T TN ETH++I +N+ SA+YSG IK GP Sbjct: 181 KTEIQPGDDVGRAFSFETTEYILDQLPCWLTYTNAETHKVIDDNLHLSAMYSGMIKGTGP 240 Query: 273 RYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKV 332 RYCPSIEDK VRF ++ HQ+FLEPEG NT+ VY G+ST+LPE +Q Q + TIPGLEK Sbjct: 241 RYCPSIEDKFVRFNDKPRHQLFLEPEGRNTNEVYVQGLSTSLPEHVQRQMLETIPGLEKA 300 Query: 333 NIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARK 392 +++R GYAIEYD I P +L+PTLETK I L+ AGQINGT+GYEEAA QGL+AGIN+A K Sbjct: 301 DMMRAGYAIEYDAIVPTQLWPTLETKMIKNLYTAGQINGTSGYEEAAGQGLMAGINAAGK 360 Query: 393 SNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMK 452 SR+D+YIGV+IDDL +KG EPYR+ TSRAEYR+ LR DNAD RLT +G + Sbjct: 361 VLNTGEKILSRSDAYIGVLIDDLVTKGTNEPYRLLTSRAEYRLLLRHDNADLRLTDMGYE 420 Query: 453 LGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTR-----TAYEF 507 LG I E R RF + Q+ + L + + K T +Q G +R A + Sbjct: 421 LGMISEERYARFNEKRQQIDAEIKRLSDIRI--KPNEHTQAIIEQHGGSRLKDGILAIDL 478 Query: 508 LSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKD 567 L P+ + + + + + ++ V E+++I++ Y Y + + + +++K E++ IP+D Sbjct: 479 LRRPEMTYDIILELLEEEHQLNADVEEQVEIQTKYEGYINKSLQQVEKVKRMEEKKIPED 538 Query: 568 FDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 DYS + +L+ E +EKLS +KP N+ QAS+I G+ PA +++LLIY+++ ++ Sbjct: 539 LDYSKIDSLATEAREKLSEVKPLNIAQASRISGVNPADISILLIYLEQGKLQ 590 >gi|320040702|gb|EFW22635.1| mitochondrial translation optimization protein [Coccidioides posadasii str. Silveira] Length = 694 Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust. Identities = 283/635 (44%), Positives = 387/635 (60%), Gaps = 27/635 (4%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R +DV+VIGGGHAG EA A AA+ GA TAL+T S IG SCNP+ GG+GKG ++REID Sbjct: 35 RPFDVVVIGGGHAGSEACAAAARSGARTALVTPSRSNIGVCSCNPSFGGIGKGTVIREID 94 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDG+ G++ D AGIQFRVLN KGPAV GPR Q DR+LY+ M E+ + L +++G+ Sbjct: 95 ALDGVAGKIVDKAGIQFRVLNRSKGPAVWGPRAQIDRDLYKKYMLEELSNYPGLSIVEGK 154 Query: 124 VAGFNTEKNIISS----------IVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGR 173 VA + + S + ++ +I VV+TTGTFL G IHIG P+GR Sbjct: 155 VADIVVSREDLGSTPGVKGKIVGVRLESGEVIPTGRVVITTGTFLGGEIHIGLEVFPSGR 214 Query: 174 MGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI 233 MG++ + L S + F GRLKTGTP RLD KTI + E Q D PFS++ D + Sbjct: 215 MGEAATFGLSKSLREAGFQLGRLKTGTPPRLDRKTIEFSALEVQPGDSPPSPFSYLNDTV 274 Query: 234 T---NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNG 290 Q+ C T TN H I+ N+ S +K GPRYCPS+E KI+RF ++ Sbjct: 275 DVGDEGQVTCWSTYTNENAHAIVKANLDKSVHIRETVK--GPRYCPSLESKILRFKDKPR 332 Query: 291 HQIFLEPEGLN-TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPK 349 H I+LEPEG DV+YPNGIS +P + Q++ +RTI GLE V +++PGY +EYDY++P+ Sbjct: 333 HMIWLEPEGFAPNDVIYPNGISMTIPADAQYEMLRTIQGLENVKMLQPGYGVEYDYVDPR 392 Query: 350 ELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIG 409 L PTLETK ISGL+LAGQINGTTGYEEAA QG++AGIN+ S + SR+D +IG Sbjct: 393 SLKPTLETKLISGLYLAGQINGTTGYEEAAGQGILAGINAGLASQSKPPMTLSRSDGFIG 452 Query: 410 VMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQ 469 +M+DDL +KGV EPYRMFT+R+EYRIS R DNAD RLT +G G + ++R F+ Sbjct: 453 IMVDDLITKGVTEPYRMFTTRSEYRISTRADNADLRLTEMGRAAGVVTDKRWNHFSDTKY 512 Query: 470 EYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSY---------PDFSIQNLFS 520 + L++LL++ S S D R+A+E L P + + S Sbjct: 513 QLLELQTLLENTKYPSTVWSRKGFRVHTDSSLRSAFELLCVNNADIDAIIPHITSPSGIS 572 Query: 521 ICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNEL 580 P + F + + R+ IE +Y+ Y RQ A+ +E L+P D DYS + LS E Sbjct: 573 YTPGS--FDAKIKARVTIEGTYSPYIKRQANSARIFARDEALLLPPDLDYSKIHGLSTEE 630 Query: 581 KEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 + L ++P ++ A +IEG+TP LL++++K Sbjct: 631 RHALERVRPESVGMARRIEGVTPTGALRLLMHMRK 665 >gi|210614311|ref|ZP_03290159.1| hypothetical protein CLONEX_02373 [Clostridium nexile DSM 1787] gi|210150727|gb|EEA81736.1| hypothetical protein CLONEX_02373 [Clostridium nexile DSM 1787] Length = 648 Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust. Identities = 268/637 (42%), Positives = 380/637 (59%), Gaps = 39/637 (6%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+V+G GHAGCEAA A+LG T + T +I M CNP IGG KGHLV+E+DAL Sbjct: 15 YDVVVVGAGHAGCEAALACARLGIKTIIFTVSVDSIALMPCNPNIGGSSKGHLVKEVDAL 74 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+V D IQ ++LN KGPAV R QAD+ Y M+ + +QENL++ Q EV Sbjct: 75 GGEMGKVIDQTFIQSKMLNKSKGPAVHSLRAQADKANYSKTMRMVLENQENLEIKQAEVT 134 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + I + ++ +C V+L TGT+L+ G++ G G + L +S Sbjct: 135 DILAKDGKIEGVQTYSGAVYKCKAVILCTGTYLKARCIYGEISQETGPNGLQAATYLTDS 194 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 K + R KTGTPAR+D +I + K E+QF DER++PFSF T + + Q C +T Sbjct: 195 LKKLGIEMYRFKTGTPARIDKNSIDFSKMEEQFGDERVVPFSFTTNPEDVQIEQASCWLT 254 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH II N+ S ++SG I+ GPRYCPSIEDK+V+F ++N HQ+F+EPEGL+T+ Sbjct: 255 YTNEKTHEIIRANLDRSPLFSGMIEGTGPRYCPSIEDKVVKFADKNKHQVFIEPEGLDTN 314 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G+S++LPE++Q+ R++PGLE I+R YAIEYD I+ ++L+PTLE K + GL Sbjct: 315 EMYVGGMSSSLPEDVQYAMYRSVPGLEHAKIVRNAYAIEYDCIDARQLYPTLEFKNVGGL 374 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + GQ NG++GYEEAAAQGLVAGIN+A K + I R+ +YIGV+IDDL +K EP Sbjct: 375 YSGGQFNGSSGYEEAAAQGLVAGINAALKILGREQIVLDRSQAYIGVLIDDLVTKESHEP 434 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRM TSRAEYR+ LR DNAD RLT IG ++G I + R Y +L + +V Sbjct: 435 YRMMTSRAEYRLLLRQDNADQRLTKIGHEIGLISDER----------YEYLLEKERIIVS 484 Query: 484 TSKNLSSTSISFKQD--------GKT-----RTAYEFLSYPDFSIQ---------NLFSI 521 + L T+I Q+ G T T E + P+ S + N+ Sbjct: 485 EVERLEHTNIGAAQEVQDLLVKYGSTPLNSGTTLAELIRRPELSYEVLEPIDKRRNIVQK 544 Query: 522 CPD-----ARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPAL 576 C + K V+E++ I Y Y RQ + ++ K EK+ IP+D DY + +L Sbjct: 545 CAEKYPENVDKLCQEVVEQVNINIKYDGYIKRQQKQVEQFKKLEKKRIPEDIDYDVIKSL 604 Query: 577 SNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYI 613 E +KL +P ++ QAS+I G++PA +++LL+Y+ Sbjct: 605 RIEAVQKLKQYRPLSIGQASRISGVSPADISVLLVYL 641 >gi|288906421|ref|YP_003431643.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Streptococcus gallolyticus UCN34] gi|288733147|emb|CBI14728.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Streptococcus gallolyticus UCN34] Length = 634 Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust. Identities = 270/617 (43%), Positives = 378/617 (61%), Gaps = 8/617 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAG EA+ AA++G T L T + M CNPAIGG KG +VREIDA Sbjct: 8 NYDVIVVGAGHAGVEASLAAARMGCKTMLATINLEMLSFMPCNPAIGGSAKGIVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ ++LN KGPAVR R QAD+ LY M+ + QENL + Q + Sbjct: 68 LGGEMGKNIDRTYIQMKMLNTGKGPAVRALRAQADKALYSRTMKHTVEQQENLTLRQSMI 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + N VV+TTGT LRG I +G+LK +G S L + Sbjct: 128 EEVLVEDGKVVGVRTATNQKFSAKAVVITTGTALRGEIILGELKYSSGPNNSLASIGLAD 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGI 242 + + + GR KTGTP R+ +I +D+TE Q DE+ FSFM+ + QI C + Sbjct: 188 NLKELGLEIGRFKTGTPPRIKVSSINYDETEIQPGDEKPNHFSFMSNDEDYLKDQIPCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +H II +N+ + ++SG +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG T Sbjct: 248 TYTNQTSHDIINKNLYRAPMFSGIVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRET 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q + I +I GLE ++R GYAIEYD + P +L TLETKKISG Sbjct: 308 EEVYIQGLSTSLPEDVQKELIHSIKGLENAEMMRTGYAIEYDIVLPHQLRATLETKKISG 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQ NGT+GYEEAA QG+VAGIN+A K + R+D+YIGVMIDDL +KG LE Sbjct: 368 LFTAGQTNGTSGYEEAAGQGIVAGINAALKVQGKPEMILKRSDAYIGVMIDDLVTKGTLE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYR+ TSRAEYR+ LR DNAD RLT IG ++G + + R +RF ++++ + L +L Sbjct: 428 PYRLLTSRAEYRLILRHDNADMRLTEIGHRVGLVDDERYQRFLNRKRQFDNELTRLSTLK 487 Query: 483 L---TSKNLSSTSISFKQDGKTRTAYEFLSYPD--FSIQNLFSICPDARKFSSLVIERLQ 537 + N ++ FK TA EF+ P+ + I F + P K S VIE L+ Sbjct: 488 IKPVKETNARIEALGFKPLTDALTAKEFMRRPEINYDIATSF-VGPAEEKLDSKVIELLE 546 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 E Y Y + + + ++K E++ IP + D+ + +++ E ++K + P + QAS+ Sbjct: 547 TEIKYEGYINKALDQVAKMKRMEEKRIPANIDWDDIDSIATEARQKFKKINPETIGQASR 606 Query: 598 IEGMTPAALNLLLIYIK 614 I G+ PA +++L++Y++ Sbjct: 607 ISGVNPADISILMVYLE 623 >gi|297835986|ref|XP_002885875.1| glucose-inhibited division family A protein [Arabidopsis lyrata subsp. lyrata] gi|297331715|gb|EFH62134.1| glucose-inhibited division family A protein [Arabidopsis lyrata subsp. lyrata] Length = 730 Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust. Identities = 266/625 (42%), Positives = 386/625 (61%), Gaps = 6/625 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAGCEAA +A+LGAST L+T I CNPA+GG K LV E+DA Sbjct: 79 TYDVIVVGAGHAGCEAALASARLGASTLLLTLNLDRIAWQPCNPAVGGPAKSQLVHEVDA 138 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G +G+VAD +Q R+LNV +GPAVR R Q D+ Y + M++ + S +NL + + V Sbjct: 139 LGGDIGKVADRCYLQKRILNVSRGPAVRSLRAQTDKREYAMEMKKIVDSTQNLCIREAMV 198 Query: 125 AGFNTEKNI-ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 KN + + +V+LTTGTF+ G I +GK +PAGR G+S S L Sbjct: 199 TDIIVGKNDNVEGVATFFGMNFYAPSVILTTGTFMSGKIWVGKKSMPAGRAGESASQGLT 258 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + K F+T RLKTGTPAR+D +TI + E Q DE + FSF D I Q+ C + Sbjct: 259 ENLQKLGFETDRLKTGTPARVDRRTIDFSNLEAQHGDEEVSWFSFDPDFHIEREQMCCYL 318 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 TRT TH++I +N+ + Y G +++ GPRYCPSIEDKIVRF ++ HQIFLEPEG + Sbjct: 319 TRTTKITHQLIRDNLHETPTYGGWVEAKGPRYCPSIEDKIVRFKDKESHQIFLEPEGRDV 378 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +Y G ST LPE +Q +R++PGLE +++RP YA+EYDY+ + +L TKKI G Sbjct: 379 PEIYVQGFSTGLPENLQLPLLRSLPGLENCSMLRPAYAVEYDYLPAHQCSRSLMTKKIEG 438 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF +GQINGTTGYEEAAAQG+++GIN+AR ++ + R SYIG +IDDL +K + E Sbjct: 439 LFFSGQINGTTGYEEAAAQGIISGINAARHADGKKHVVLERESSYIGTLIDDLVTKDLRE 498 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR----QKRFAKYIQEYNFLRSLL 478 PYRM TSR+E+R+ LR DNAD+RLTP+G +LG I +RR Q++ A+ +E L+++ Sbjct: 499 PYRMLTSRSEHRLLLRFDNADSRLTPLGRELGLIDDRRWKLYQEKQARISEEKKRLKTVK 558 Query: 479 KSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 S+ + +S+S + + T L P + L S + + ++I Sbjct: 559 ISVAVGDLASEVSSVSSQPVKVSATLESLLKKPHIHYKLLEKHGFGNETLSRMEKDCVEI 618 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + Y + RQ + +++ ++ R +P D DY S+ LS+E +EKLS ++P + QAS++ Sbjct: 619 DIKYEGFIVRQQNQLQQMAHQQHRRLPDDLDYYSMTTLSHEGREKLSKVRPETIGQASRV 678 Query: 599 EGMTPAALNLLLIYIKKNTVKLNEI 623 G++PA + LLI ++ N + ++ Sbjct: 679 GGVSPADITALLITLESNRRRTQDV 703 >gi|303322268|ref|XP_003071127.1| glucose-inhibited division protein A containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240110826|gb|EER28982.1| glucose-inhibited division protein A containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 694 Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust. Identities = 284/635 (44%), Positives = 386/635 (60%), Gaps = 27/635 (4%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R +DV+VIGGGHAG EA A AA+ GA TAL+T S IG SCNP+ GG+GKG ++REID Sbjct: 35 RPFDVVVIGGGHAGSEACAAAARSGARTALVTPSRSNIGVCSCNPSFGGIGKGTVIREID 94 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDG+ G++ D AGIQFRVLN KGPAV GPR Q DR+LY+ M E+ + L +++G+ Sbjct: 95 ALDGVAGKIVDKAGIQFRVLNRSKGPAVWGPRAQIDRDLYKKYMLEELSNYPGLSIVEGK 154 Query: 124 VAGFNTE----------KNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGR 173 VA K I + ++ +I VV+TTGTFL G IHIG P+GR Sbjct: 155 VADIVVSREDLRSTPGVKGKIVGVRLESGEVIPTGRVVITTGTFLGGEIHIGLEVFPSGR 214 Query: 174 MGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI 233 MG++ + L S + F GRLKTGTP RLD KTI + E Q D PFS++ D + Sbjct: 215 MGEAATFGLSKSLREAGFQLGRLKTGTPPRLDRKTIEFSALEVQPGDSPPSPFSYLNDTV 274 Query: 234 T---NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNG 290 Q+ C T TN H I+ N+ S +K GPRYCPS+E KI+RF ++ Sbjct: 275 DVGDEGQVTCWSTYTNENAHAIVKANLDKSVHIRETVK--GPRYCPSLESKILRFKDKPR 332 Query: 291 HQIFLEPEGLN-TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPK 349 H I+LEPEG DV+YPNGIS +P + Q++ +RTI GLE V +++PGY +EYDY++P+ Sbjct: 333 HMIWLEPEGFAPNDVIYPNGISMTIPADAQYEMLRTIQGLENVKMLQPGYGVEYDYVDPR 392 Query: 350 ELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIG 409 L PTLETK ISGL+LAGQINGTTGYEEAA QG++AGIN+ S + SR+D +IG Sbjct: 393 SLKPTLETKLISGLYLAGQINGTTGYEEAAGQGILAGINAGLASQSKPPMTLSRSDGFIG 452 Query: 410 VMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQ 469 +M+DDL +KGV EPYRMFT+R+EYRIS R DNAD RLT +G G + ++R F+ Sbjct: 453 IMVDDLITKGVTEPYRMFTTRSEYRISTRADNADLRLTEMGRAAGVVTDKRWNHFSDTKY 512 Query: 470 EYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSY---------PDFSIQNLFS 520 + L++LL++ S S D R+A+E L P + + S Sbjct: 513 QLLELQTLLENTKYPSTVWSRKGFRVHTDSSLRSAFELLCVNNADIDAIIPHITSPSGIS 572 Query: 521 ICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNEL 580 P + F + + R+ IE +Y+ Y RQ A+ +E L+P D DYS + LS E Sbjct: 573 YTPGS--FDAKIKARVTIEGTYSPYIKRQANSARIFARDEALLLPPDLDYSKIHGLSTEE 630 Query: 581 KEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 + L ++P ++ A +IEG+TP LL++++K Sbjct: 631 RHALERVRPESVGMARRIEGVTPTGALRLLMHMRK 665 >gi|125624808|ref|YP_001033291.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactococcus lactis subsp. cremoris MG1363] gi|146345425|sp|O32806|MNMG_LACLM RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|124493616|emb|CAL98603.1| glucose inhibited division protein A [Lactococcus lactis subsp. cremoris MG1363] gi|300071607|gb|ADJ61007.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactococcus lactis subsp. cremoris NZ9000] Length = 625 Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust. Identities = 275/620 (44%), Positives = 381/620 (61%), Gaps = 12/620 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIGGGHAG EA+ AA++G+ T L+T + + M CNP+IGG KG +VREIDA Sbjct: 6 NYDVIVIGGGHAGVEASLAAARMGSKTLLMTINLNMVAFMPCNPSIGGSAKGIVVREIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ ++LN KGPAVR R QAD++ Y +M+ + QENL + QG V Sbjct: 66 LGGEMGRNIDKTYIQMKMLNTGKGPAVRALRAQADKDEYAASMKNTVSDQENLTLRQGMV 125 Query: 125 AGF--NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 + EK + + + V++TTGT LRG I IG+LK +G S L Sbjct: 126 EELILDDEKQKVIGVRTSTGTQYGAKAVIITTGTALRGEIIIGELKYSSGPNNSLSSIGL 185 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIEC 240 ++ + F+ GR KTGTP R+ +I +DKTE Q DE FSFM+ + QI C Sbjct: 186 ADNLREIGFEIGRFKTGTPPRVLASSIDYDKTEIQPGDEAPNHFSFMSSDEDYLKDQIPC 245 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +T T +H I+ +N+ + ++SG +K GPRYCPSIEDKI RF ++ HQ+FLEPEG Sbjct: 246 WLTYTTENSHTILRDNLHRAPLFSGIVKGVGPRYCPSIEDKITRFADKPRHQLFLEPEGR 305 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 NT+ VY G+ST++PE++Q +++IPGLE ++RPGYAIEYD + P +L PTLETK I Sbjct: 306 NTEEVYIGGLSTSMPEDVQFDLVKSIPGLENAKMMRPGYAIEYDVVMPHQLRPTLETKLI 365 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 SGLF AGQ NGT+GYEEAA QGLVAGIN+A K R+++YIGVMIDDL +KG Sbjct: 366 SGLFTAGQTNGTSGYEEAAGQGLVAGINAALKIQGKPEFILKRSEAYIGVMIDDLVTKGT 425 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIG----ERRQKRFAKYIQEYNFLRS 476 LEPYR+ TSRAEYR+ LR DNAD RLT IG ++G + E Q + A++ +E L S Sbjct: 426 LEPYRLLTSRAEYRLILRHDNADRRLTEIGRQVGLVSDAQWEHYQAKMAQFDREMKRLNS 485 Query: 477 -LLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARK-FSSLVIE 534 LK L T + L +D T EFL P+ + + A + VIE Sbjct: 486 EKLKPLPDTQEKLGKLGFGPIKD--ALTGAEFLKRPEVNYDEVIDFIGQAPEVIDRTVIE 543 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 ++ E +Y Y + M + ++ E + IPK+ D+ L +++ E ++K + P L Q Sbjct: 544 LIETEITYEGYIKKAMDQVDKMHRLEAKRIPKNMDWDKLDSIATEARQKFKKINPETLGQ 603 Query: 595 ASKIEGMTPAALNLLLIYIK 614 AS+I G+ PA +++L++Y++ Sbjct: 604 ASRISGVNPADISILMVYLE 623 >gi|88809508|ref|ZP_01125016.1| glucose-inhibited division protein A [Synechococcus sp. WH 7805] gi|88786727|gb|EAR17886.1| glucose-inhibited division protein A [Synechococcus sp. WH 7805] Length = 659 Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust. Identities = 269/630 (42%), Positives = 377/630 (59%), Gaps = 20/630 (3%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 S+DVIV+GGGHAGCEAA AA+LG +TAL T I CNPA+GG K LV E+DA Sbjct: 10 SFDVIVVGGGHAGCEAAITAARLGLNTALFTLNLDRIAWQPCNPAVGGPAKSQLVHEVDA 69 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G++GR+ADA IQ R+LN +GPAV R Q D+ Y M + + NL + + V Sbjct: 70 LGGVIGRLADATAIQKRILNASRGPAVWALRAQTDKRQYSRQMLQLLQHTPNLALREAMV 129 Query: 125 AGFNTEKNI----------------ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLK 168 G E + I+ + S VVLT GTFL G I +G Sbjct: 130 TGLEIEGDASGGGESWDPSQGPAARITGVRTYFGSTYEAKAVVLTAGTFLGGRIWVGHQS 189 Query: 169 IPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSF 228 + AGR G+ + L ++ + F T RLKTGTPAR+D ++I D+ ++Q +D FSF Sbjct: 190 MAAGRAGEQAAEGLTDALQQLGFHTDRLKTGTPARVDRRSIALDQLDEQPSDAADRFFSF 249 Query: 229 -MTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGE 287 ++ Q+ C ITRT TH++I +N+ +AIY G I S GPRYCPSIEDKIVRF + Sbjct: 250 DPAAWVSGEQMSCHITRTTAATHQLIKDNLHLTAIYGGVIDSKGPRYCPSIEDKIVRFAD 309 Query: 288 RNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN 347 ++ HQIFLEPEG +T +Y G ST LPE IQ Q +R++PGLE+ ++RP Y+++YDY+ Sbjct: 310 KDSHQIFLEPEGRDTPEIYVQGFSTGLPEPIQLQLLRSLPGLEQAVMLRPAYSVDYDYLP 369 Query: 348 PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSY 407 +LFP+LETK++ GLF AGQ+NGTTGYEEAAAQGLVAG+N+AR+ + F R SY Sbjct: 370 ATQLFPSLETKRVEGLFSAGQLNGTTGYEEAAAQGLVAGLNAARRIRGQSAVHFPREGSY 429 Query: 408 IGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKY 467 IG MIDDL SK + EPYR+ TSR+EYR+ LR DNAD RLTP+G +LG I +RR + F + Sbjct: 430 IGTMIDDLVSKDLREPYRVLTSRSEYRLVLRGDNADRRLTPLGRELGLIDDRRWQMFEQK 489 Query: 468 IQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTR---TAYEFLSYPDFSIQNLFSICPD 524 + + L++ L + + ++ + + T + L P +L Sbjct: 490 LTALESEKQRLETQRLKVSDPVAPAVEAQTGASIKGSITLADLLRRPGMHADDLVHHGLA 549 Query: 525 ARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKL 584 V E +I+ Y+ Y RQ + ++K + +R +P DY+ + LS E +EKL Sbjct: 550 DADLPLPVREGAEIDIKYSGYLQRQQQQIDQVKRQSRRKLPASIDYAKISTLSREAREKL 609 Query: 585 SILKPFNLLQASKIEGMTPAALNLLLIYIK 614 + ++P L QAS+I G++ A L LL++++ Sbjct: 610 TAVRPITLGQASQIPGVSQADLTALLMWLE 639 >gi|256846128|ref|ZP_05551586.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Fusobacterium sp. 3_1_36A2] gi|256719687|gb|EEU33242.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Fusobacterium sp. 3_1_36A2] Length = 633 Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust. Identities = 275/630 (43%), Positives = 381/630 (60%), Gaps = 21/630 (3%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +D+IV+G GHAGCEAA +A++G TA+ T TIG MSCNP++GG K HL REID Sbjct: 2 QEFDIIVVGAGHAGCEAALASARMGMKTAIFTISLDTIGVMSCNPSLGGPAKSHLAREID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G MGR D IQ RVLN +KGPAVR R QAD+ Y M++ + ENL VIQG Sbjct: 62 ALGGEMGRNIDKTFIQIRVLNTRKGPAVRSLRAQADKMAYANEMKKTLEHTENLSVIQGM 121 Query: 124 VAGFNTEKN----IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 V+ E+ II I +++ R V++ TGTFLRG+IHIG++ AGRMG+ S Sbjct: 122 VSELVAEEENGKKIIKGIKIREGLEYRAKAVIIATGTFLRGLIHIGEINFSAGRMGELSS 181 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADE-RLIPFSFMT---DKITN 235 L S K GR KTGTP R+DG+TI + E+Q D+ +++ FS T D + Sbjct: 182 EDLPLSLEKIGLKLGRFKTGTPTRIDGRTIDYSVLEEQPGDKSQVLKFSNRTKDEDALNR 241 Query: 236 RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFL 295 RQI C I TN + H+II + S +++G I+ GPRYCPSIEDKI R+ ++N H +FL Sbjct: 242 RQIPCYIAHTNEKVHKIIRNAKERSPLFNGTIQGLGPRYCPSIEDKIFRYPDKNQHHLFL 301 Query: 296 EPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTL 355 E EG T+ +Y G+S++LP ++Q + ++ I G E I+R YAIEYDY+ P+E+ TL Sbjct: 302 EREGYETNEIYLGGLSSSLPVDVQEEMLKNIKGFENAKIMRYAYAIEYDYVPPEEIKYTL 361 Query: 356 ETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDL 415 E++ + LFLAGQINGT+GYEEA AQGL+AGIN+ RK + + R DSYIG +IDDL Sbjct: 362 ESRTVKNLFLAGQINGTSGYEEAGAQGLMAGINAVRKLRNEEPVILDRADSYIGTLIDDL 421 Query: 416 TSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLR 475 SKG EPYRMFT+R+EYR+ LR DNAD RLT +G +LG + E +R K ++ + Sbjct: 422 VSKGTNEPYRMFTARSEYRLYLREDNADLRLTKLGYELGLVPEEEYQRVEKKRKDVKIIT 481 Query: 476 SLLKSLVLTSKNLSSTSISFK------QDGKTRTAYEFLSYPDFSIQNLFSICP-----D 524 +L + N I K +DG T E L P+ + +++ I D Sbjct: 482 EILVKTNVGPSNPRVNEILLKRGENPIKDGS--TLLELLRRPEVTFEDIKYISEEIKGLD 539 Query: 525 ARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKL 584 + + +++I Y Y R + ++ K E + IP D DY L + E K+KL Sbjct: 540 LQGYDYDTTYQVEITVKYEGYINRALKMIEKHKSMENKKIPVDIDYDDLKTIPKEAKDKL 599 Query: 585 SILKPFNLLQASKIEGMTPAALNLLLIYIK 614 +KP N+ QAS+I G++PA + +LIY+K Sbjct: 600 KRIKPINIGQASRISGVSPADIQAILIYLK 629 >gi|15673829|ref|NP_268004.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactococcus lactis subsp. lactis Il1403] gi|13878503|sp|Q9CEJ4|MNMG_LACLA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|12724877|gb|AAK05945.1|AE006414_11 glucose inhibited division protein GidA [Lactococcus lactis subsp. lactis Il1403] gi|326407338|gb|ADZ64409.1| glucose inhibited division protein A [Lactococcus lactis subsp. lactis CV56] Length = 625 Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust. Identities = 275/620 (44%), Positives = 379/620 (61%), Gaps = 12/620 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDV+VIGGGHAG EA+ AA++G+ T L+T + + M CNP+IGG KG +VREIDA Sbjct: 6 NYDVVVIGGGHAGVEASLAAARMGSKTLLMTINLNMVAFMPCNPSIGGSAKGIVVREIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ ++LN KGPAVR R QAD++ Y +M+ + QENL + QG V Sbjct: 66 LGGEMGRNIDKTYIQMKMLNTGKGPAVRALRAQADKDEYADSMKNTVSDQENLTLRQGMV 125 Query: 125 AGF--NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 + EK + I + V++TTGT LRG I IG+LK +G S L Sbjct: 126 EELILDEEKKKVIGIKTSTGTKYGAKAVIITTGTALRGEIIIGELKYSSGPNNSLSSIGL 185 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIEC 240 ++ + F+ GR KTGTP R+ +I +DKTE Q DE FSFM+ + QI C Sbjct: 186 ADNLREIGFEIGRFKTGTPPRVLASSIDYDKTEIQPGDEAPNHFSFMSSDENYLKDQIPC 245 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +T T +H I+ N+ + ++SG +K GPRYCPSIEDKI RF ++ HQ+FLEPEG Sbjct: 246 WLTYTTENSHTILRGNLHRAPLFSGIVKGVGPRYCPSIEDKITRFADKPRHQLFLEPEGR 305 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 NT+ VY G+ST++PE++Q +++IPGLE ++RPGYAIEYD + P +L PTLETK + Sbjct: 306 NTEEVYIGGLSTSMPEDVQFDLVKSIPGLENAQMMRPGYAIEYDVVMPHQLRPTLETKLV 365 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 SGLF AGQ NGT+GYEEAA QGLVAGIN+A K R+++YIGVMIDDL +KG Sbjct: 366 SGLFTAGQTNGTSGYEEAAGQGLVAGINAALKVQGKSEFILKRSEAYIGVMIDDLVTKGT 425 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIG----ERRQKRFAKYIQEYNFLRS 476 LEPYR+ TSRAEYR+ LR DNAD RLT IG ++G + E Q + A++ +E L S Sbjct: 426 LEPYRLLTSRAEYRLILRHDNADRRLTEIGRQVGLVSDEQWEHYQAKMAQFDREMKRLNS 485 Query: 477 -LLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA-RKFSSLVIE 534 LK L T + L +D T EFL P+ + A K VIE Sbjct: 486 EKLKPLPDTQEKLGKLGFGPIKD--ALTGAEFLKRPEVHYNEVIDFIGQAPEKIDRTVIE 543 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 ++ E +Y Y + M + ++ E + IPK+ D+ L +++ E ++K + P L Q Sbjct: 544 LIETEITYEGYIKKAMDQVDKMHRLEAKRIPKNMDWDKLDSIATEARQKFKKINPETLGQ 603 Query: 595 ASKIEGMTPAALNLLLIYIK 614 AS+I G+ PA +++L++Y++ Sbjct: 604 ASRISGVNPADISILMVYLE 623 >gi|223996205|ref|XP_002287776.1| hypothetical protein THAPSDRAFT_268238 [Thalassiosira pseudonana CCMP1335] gi|220976892|gb|EED95219.1| hypothetical protein THAPSDRAFT_268238 [Thalassiosira pseudonana CCMP1335] Length = 769 Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust. Identities = 297/667 (44%), Positives = 398/667 (59%), Gaps = 51/667 (7%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 ++SYDVI++GGGHAG EAA +A+ GA T L+T ST+G +SCNP+IGG+GKGHLVREI Sbjct: 92 SKSYDVIIVGGGHAGTEAATASARTGARTLLLTQNKSTLGELSCNPSIGGIGKGHLVREI 151 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ-------- 114 DAL G+MG VAD +GI FR+LN +KGPAVRGPR Q DR+LY+ MQ +L+ Sbjct: 152 DALQGVMGEVADGSGIHFRMLNRRKGPAVRGPRGQMDRDLYKKNMQDLLLNGVELGINGI 211 Query: 115 ENLDVIQGEVAGFN-TEKNIISSIV-MQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAG 172 ENLDV++ E + I ++ + D I +TVVLTTGTFLRGV+ IG + G Sbjct: 212 ENLDVMEASAEDLLLDEGDAIETLAPLADRVEIESTTVVLTTGTFLRGVLMIGHERYSGG 271 Query: 173 R-MGDS-----PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPF 226 R + DS PS L + +F F GRLKTGTPARLDG+TI WD Q ++ IPF Sbjct: 272 RHLRDSEEVEPPSVGLALTLERFGFPLGRLKTGTPARLDGRTIDWDGCNIQPSERPAIPF 331 Query: 227 SFMTDK--------ITNRQIECGITRTNLETHRIIMENIKHSAIYSG-DIKSYGPRYCPS 277 S + + I+C T TN THR++M+ Y G D K GPRYCPS Sbjct: 332 SHIRQSRGEEPPLAASGNLIDCYQTATNEATHRLVMDYAHLLPQYDGMDGKGNGPRYCPS 391 Query: 278 IEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRP 337 I K+ RF ERN H FLEPEGLNT +VYPNG+S PEEIQ Q R++ GLEKV I+RP Sbjct: 392 IFKKVERFAERNSHNSFLEPEGLNTHIVYPNGMSGPYPEEIQLQIFRSMKGLEKVEIVRP 451 Query: 338 GYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLD 397 GY +EYD++NP L TLETK I+GL+LAGQI GTTGYEEA AQG++AG N+ R + Sbjct: 452 GYDVEYDFVNPTALTHTLETKSIAGLYLAGQICGTTGYEEAGAQGVIAGANAGRAAGAAY 511 Query: 398 C-------ICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIG 450 R ++YIGV+IDDL +KG LEPYRMFTSRAEYRISLR DNAD RLT G Sbjct: 512 RGEKPPLPFVLGRDEAYIGVLIDDLVTKGTLEPYRMFTSRAEYRISLRADNADIRLTRKG 571 Query: 451 MKLGCIG--------ERRQKRFAKYIQEYNFLRSLLKSLVLTSKN-LSSTSISFKQ--DG 499 + G + + R+ A ++ + + N L + + +Q + Sbjct: 572 AEHGLVTDPERLAALDMRENLIADNVERLRNFKLFVTDWANRGGNDLMGGAAATRQGRES 631 Query: 500 KTRTAYEFLSYPDFSIQNLFSICPD--ARKFSSLVIERLQIESSYAAYTGRQMIEAKEIK 557 ++A E L P +++++ I D S V + ++ Y +Y RQ + + + Sbjct: 632 HKKSAEEVLGMPHVTLEDVEKIMADYEMNPTPSSVYDTVEASVKYKSYVVRQEKDIESWR 691 Query: 558 FEEKRLIPKD--FDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 + IP + +++S +P S E EKL+ KP +AS+I G+TP + L+Y+ Sbjct: 692 KAQGARIPPNIIYEHSIMPTFSKEEIEKLNRFKPTTFAEASQISGLTPQS----LVYLYH 747 Query: 616 NTVKLNE 622 + +KLN+ Sbjct: 748 HVMKLNK 754 >gi|326404881|ref|YP_004284963.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [Acidiphilium multivorum AIU301] gi|325051743|dbj|BAJ82081.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [Acidiphilium multivorum AIU301] Length = 566 Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust. Identities = 241/426 (56%), Positives = 304/426 (71%), Gaps = 1/426 (0%) Query: 33 LITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVR 92 L+TH+ IG MSCNPAIGG+GKGHLVREIDALDG+MGR ADAA I F++LN KGPAV Sbjct: 25 LLTHRRDRIGEMSCNPAIGGIGKGHLVREIDALDGIMGRAADAACIHFKMLNRSKGPAVW 84 Query: 93 GPRTQADRELYRLAMQREILSQENLDVIQGEVAGFN-TEKNIISSIVMQDNSMIRCSTVV 151 GPR QADR LYR A+Q + +Q+ L +++GE A + +++++ + I C V Sbjct: 85 GPRAQADRGLYRAAVQALLAAQDGLTILEGEAADLELSADGALAAVITGAGARIACRAAV 144 Query: 152 LTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIW 211 LTTGTFLRGV+H G+ GR+GD+ SN+L GRLKTGTPARLD ++I W Sbjct: 145 LTTGTFLRGVLHFGERTEEGGRVGDAASNALSARLRGLGLALGRLKTGTPARLDRRSIDW 204 Query: 212 DKTEKQFADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYG 271 + + + PFS +T +I N QI C I+ T ETH II N+ SA+Y G I G Sbjct: 205 EALPEDRGEAEPAPFSLLTGRIANPQISCRISETTPETHAIINANLHRSAVYGGRIDGAG 264 Query: 272 PRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEK 331 PRYCPSIEDK+VRF ER HQ+FLEPEGL + VYPNGIST+LPEE+Q FIRT+PGL + Sbjct: 265 PRYCPSIEDKVVRFAERPRHQVFLEPEGLEDETVYPNGISTSLPEEVQEAFIRTMPGLSR 324 Query: 332 VNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSAR 391 ++RPGYA+EYDY++P+EL L KK+ GLFLAGQINGTTGYEEA AQGL+AG+N+A Sbjct: 325 AVLLRPGYAVEYDYVDPRELTHALALKKVPGLFLAGQINGTTGYEEAGAQGLLAGVNAAL 384 Query: 392 KSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGM 451 + + R + YIGV++DDL ++GV EPYRMFTSRAE+R+SLR DNAD RLTP G+ Sbjct: 385 VAAGRSMVTVRRHEGYIGVLVDDLVTRGVSEPYRMFTSRAEHRLSLRADNADLRLTPRGL 444 Query: 452 KLGCIG 457 GC+G Sbjct: 445 DWGCVG 450 Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 36/62 (58%) Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y RQ E + ++ LIP DFD+S + LS E++ +L ++P L A ++EGM Sbjct: 487 YEGYLTRQESEIRARAKDDAVLIPPDFDFSVVGGLSAEIRARLERVRPETLGVAGRLEGM 546 Query: 602 TP 603 TP Sbjct: 547 TP 548 >gi|91070437|gb|ABE11348.1| glucose inhibited division protein A [uncultured Prochlorococcus marinus clone HOT0M-10E12] Length = 655 Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust. Identities = 276/634 (43%), Positives = 381/634 (60%), Gaps = 17/634 (2%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 N S+DVIVIGGGHAGCEAA AKLG STAL T I CNPA+GG K LV E+ Sbjct: 8 NESFDVIVIGGGHAGCEAAITTAKLGFSTALFTINLDRIAWQPCNPAVGGPAKSQLVHEV 67 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G++G++AD IQ R+LN +GPAV R Q D+ Y M + + +NL + + Sbjct: 68 DALGGIIGKLADETAIQKRILNASRGPAVWALRAQTDKREYSKKMIEILQNTDNLSLKEA 127 Query: 123 EVAGFNTEKN----IISSIVMQD---------NSMIRCSTVVLTTGTFLRGVIHIGKLKI 169 + + K +IS + + S +V++T GTFL G I IG + Sbjct: 128 MITELDIAKTEEIGLISKKIFKKRIKGVRTFFGSYYSAKSVIITAGTFLEGRIWIGNKSM 187 Query: 170 PAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM 229 AGR G+ + L + + T RLKTGTPAR+D ++II+D+ + Q + FSF Sbjct: 188 SAGRSGEQAAKGLTQNLHEIGIKTERLKTGTPARVDKRSIIFDELDIQPSTAADKYFSFD 247 Query: 230 TDKITNR-QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGER 288 D N Q+ C ITRT +TH++I +N+ + IY G I S GPRYCPSIEDKIV+F ++ Sbjct: 248 PDIKNNMPQVSCHITRTTTKTHQLIRDNLHLTPIYGGFIDSKGPRYCPSIEDKIVKFADK 307 Query: 289 NGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINP 348 HQIFLEPEG+NT +Y G ST LPE IQ + +RT+PGL + ++RP YA+EYDYI Sbjct: 308 ESHQIFLEPEGINTPEIYVQGFSTGLPENIQLELLRTLPGLGECKMLRPAYAVEYDYIPA 367 Query: 349 KELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYI 408 +L +LETK+I LF AGQINGTTGYEEAAAQGLVAGIN+ RK NK D I F+R SYI Sbjct: 368 TQLQTSLETKEIEYLFSAGQINGTTGYEEAAAQGLVAGINATRKLNKKDPIIFTRESSYI 427 Query: 409 GVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYI 468 G MI+DL +K + EPYR+ TSR+EYR++LR DNAD RLTP+G ++G I E+R + + + Sbjct: 428 GTMINDLITKDLKEPYRVLTSRSEYRLTLRGDNADRRLTPLGYQIGLINEKRWSVYQEKM 487 Query: 469 QEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTR---TAYEFLSYPDFSIQNLFSICPDA 525 + + L + L + + S I + K + T E L P+F +L + Sbjct: 488 KLLEEEKFRLNNTRLKNTDEISKKIELETGSKIKGSTTLKELLKRPNFHYSDLIKYNLNE 547 Query: 526 RKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 R S + E ++I+ Y Y RQ ++I + + +P++ +Y + LS E +E L+ Sbjct: 548 RNLGSSIQEGVEIDIKYEGYLKRQKNNIEQINRQSCKSLPEEINYEKIDTLSLEARENLN 607 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 +KP N ASKI G++ A L LL+++K +K Sbjct: 608 KIKPKNFGDASKIPGVSKADLTALLVWLKIREIK 641 >gi|257067215|ref|YP_003153471.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Anaerococcus prevotii DSM 20548] gi|256799095|gb|ACV29750.1| glucose inhibited division protein A [Anaerococcus prevotii DSM 20548] Length = 628 Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust. Identities = 270/618 (43%), Positives = 379/618 (61%), Gaps = 12/618 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDV+V+G GHAGCEA A++LG T ++T +I M CNP IGG GKGH+VREIDA Sbjct: 9 SYDVVVVGAGHAGCEAGLAASRLGLKTLILTTSMESIADMPCNPNIGGTGKGHIVREIDA 68 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 + G M D IQ R+LN KGPAV R QAD+ LY M++ + ++ +D+ + EV Sbjct: 69 MGGQMALNIDKTFIQSRMLNTSKGPAVHSLRVQADKRLYHEEMKKTL--EKEVDLFEQEV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 N E I S + ++ +++ TGT+L G I IG + +G G S + L + Sbjct: 127 DKINYEDGKIVSCETVEGAIFETKALIIATGTYLNGKILIGDYEKVSGPHGLSAATYLSD 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KITNRQIE-CG 241 S + F R KTGTPAR+D K++ +KTE Q D+ +IPFSF+ + ++R E C Sbjct: 187 SLEELGFKLRRFKTGTPARVDRKSLHLEKTEIQKGDDEVIPFSFLNEGRDFSDRHQENCY 246 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T T ET +IIM+N+ S IY G IK GPRYCPSIEDK+VRF +R+ HQ+F+EPEGL Sbjct: 247 LTYTRPETKQIIMDNLDRSPIYGGHIKGVGPRYCPSIEDKMVRFPDRDIHQVFIEPEGLT 306 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 TD +Y G+S++LP+E+Q F +TI GLE V I+RP YAIEYD I+ + L+ TLE+K Sbjct: 307 TDEMYVQGVSSSLPQEVQFDFYKTIIGLEDVKIMRPAYAIEYDMIDTRNLYRTLESKDYE 366 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GL+ AGQING++GYEEAA QGL+AGIN+A K D R+D YIGV+IDDL ++G Sbjct: 367 GLYFAGQINGSSGYEEAAGQGLIAGINAALKIKGEDPFILDRSDGYIGVLIDDLVTEGTE 426 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRM TSR EYR+++R DNAD RLT K+G + E R ++ + LK++ Sbjct: 427 EPYRMMTSRCEYRLTMRQDNADQRLTERAYKIGLVSEERYQKMVDKRTAIDKEIERLKTV 486 Query: 482 VLTSKNLSSTSISFKQDGKT-----RTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 +LT K T+ K+ G T + ++ L P+ + L P+ K + Sbjct: 487 MLTPK--EETNKKLKELGTTPLNNGMSLHDLLKRPELDYEMLEVFDPERPKLPKFQQIQA 544 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 Q E Y Y +QM + + K E + + K+ DY +P L E EKL+ ++P ++ QAS Sbjct: 545 QTEIKYEGYIKKQMADIDKFKKLEGKKLRKNIDYFKIPGLKKESAEKLNDIQPESIGQAS 604 Query: 597 KIEGMTPAALNLLLIYIK 614 +I G++PA +N+LLI +K Sbjct: 605 RISGVSPADINVLLIRLK 622 >gi|255729512|ref|XP_002549681.1| hypothetical protein CTRG_03978 [Candida tropicalis MYA-3404] gi|240132750|gb|EER32307.1| hypothetical protein CTRG_03978 [Candida tropicalis MYA-3404] Length = 684 Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust. Identities = 279/651 (42%), Positives = 399/651 (61%), Gaps = 38/651 (5%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 + VIV+GGGHAGCEAA +A+ T LIT + IG+ SCNP++GG+GKG L+RE+DAL Sbjct: 38 HPVIVVGGGHAGCEAATGSARSQTPTTLITPYINKIGTASCNPSMGGVGKGTLLREVDAL 97 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DG+ R+ D AGI FR+LN +G AV GPR Q DR++Y MQ+EIL+ NL V++ +V Sbjct: 98 DGVSARITDKAGIHFRILNASRGAAVHGPRAQIDRKIYLEEMQKEILNYPNLKVLEAQVE 157 Query: 126 G------FNTEKN-------IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAG 172 N E + I+ +++ D +++ VV+TTGTFL G IHIG P+G Sbjct: 158 DIIIEPKLNNEGDYAGRTFGIVKGVILSDGRVLKSEKVVVTTGTFLGGEIHIGLKAYPSG 217 Query: 173 RMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK 232 R+G+ + L + F GRLKTGTP RL KTI + +Q +D P S+M DK Sbjct: 218 RIGEEATFGLSKTLRDAGFRLGRLKTGTPPRLSAKTINFKGLIEQPSDFPPQPMSYMNDK 277 Query: 233 IT--NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNG 290 + ++ ++C T+TN E H+II +N+ S +K GPRYCPSIE K+++F ++ Sbjct: 278 VALEDQLVKCYQTKTNPEFHKIIADNLDKSIHIRETVK--GPRYCPSIESKVIKFPHKDF 335 Query: 291 HQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKE 350 H ++LEPEGL+TD++YPNGIS +PEEIQ + +R +PG E V + +PGY +EYD+I+P+E Sbjct: 336 HYVWLEPEGLDTDLIYPNGISCTMPEEIQEKLVRLMPGCENVTMTQPGYGVEYDFIDPRE 395 Query: 351 LFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGV 410 L TLETK + GLFLAGQINGTTGYEEAAAQG VAGIN+ K + R D + + Sbjct: 396 LKMTLETKLVDGLFLAGQINGTTGYEEAAAQGCVAGINAGLSYMKKPALDLRRPDGLMAI 455 Query: 411 MIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQE 470 MIDDL +KGV EPYRMFTSR+E+R S+R DNAD RLT G +LG +GE R K + + + Sbjct: 456 MIDDLITKGVEEPYRMFTSRSEFRFSIRSDNADFRLTERGYQLGVVGEDRYKHYKEESNQ 515 Query: 471 YNFLRSLLKSLVLTSK----NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDAR 526 + +++ L L L + L + + D K + ++ L+YP SI L P Sbjct: 516 FEDIKNTLSELKLIGRYWAPALEGVTYDARDDVKV-SGWKLLAYPGMSINCLL---PHMS 571 Query: 527 KFSSLV-------IERLQ----IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPA 575 KF + V ERL+ +ES Y + R+ ++ + +K ++P++F+Y++ Sbjct: 572 KFMNKVPNSFDNISERLRNKIDVESDYEPFRTRERRNIEKFEDYDKFILPQNFNYTNTGN 631 Query: 576 L--SNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVKLNEIV 624 L S+E+ L++++P L QA K+ G+TP A+ L K T EI Sbjct: 632 LKISHEVCSILNVIQPSTLGQAMKLRGVTPTAIMELRKIAKLGTSSNKEIA 682 >gi|308182385|ref|YP_003926512.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Helicobacter pylori PeCan4] gi|308064570|gb|ADO06462.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Helicobacter pylori PeCan4] Length = 621 Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust. Identities = 283/627 (45%), Positives = 377/627 (60%), Gaps = 16/627 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M+ S D++VIGGGHAG EA+ +AAK+GA LIT TIG SCNPAIGGLGKGHL + Sbjct: 1 MVKES-DILVIGGGHAGIEASLIAAKMGARVHLITMLIDTIGLASCNPAIGGLGKGHLTK 59 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+D L G MG + D +G+Q+RVLN KGPAVRG R Q D + YR+ + +L+ NL V Sbjct: 60 EVDVLGGAMGIITDNSGLQYRVLNASKGPAVRGTRAQIDMDTYRIFARNLVLNTPNLSVS 119 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q E + + + N+ + V++TTGTFL+GV+HIG+ + GR G++ SN Sbjct: 120 QEMTESLIIENDEVVGVTTNINNTYKAKKVIITTGTFLKGVVHIGEHQNQNGRFGENASN 179 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 SL + + F RLKTGT R+ G +I ++ E+ F D FS+ T Q+ C Sbjct: 180 SLALNLRELGFKVERLKTGTCPRVAGNSIDFEGLEEHFGDTNPPYFSYKTKDFNPTQLSC 239 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN TH+II +N + ++SG I+ GPRYCPSIEDKI RF E+ HQ+FLEP+ + Sbjct: 240 FITYTNPITHQIIRDNFHRAPLFSGQIEGIGPRYCPSIEDKINRFSEKERHQLFLEPQTI 299 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + Y NG+ST+LP ++Q + I +I GLE I R GYAIEYD+I P EL TLETKKI Sbjct: 300 HKSEYYINGLSTSLPLDVQEKVIHSIKGLENALITRYGYAIEYDFIQPTELTHTLETKKI 359 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GL+LAGQINGTTGYEEAAAQGL+AGIN+ D R ++YIGV+IDDL +KG Sbjct: 360 KGLYLAGQINGTTGYEEAAAQGLMAGINAVLALKNQDPFILKRNEAYIGVLIDDLVTKGT 419 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DN RL +LG + E K K QE LK Sbjct: 420 NEPYRMFTSRAEYRLLLREDNTLFRLGEHAYRLGLMEEDFYKGLKKDQQEIQDNLKRLKE 479 Query: 481 LVLTS--------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV 532 VLT L I+ K DG + L+ F+++ + S + V Sbjct: 480 CVLTPSKEVLKRLNELDENPINDKIDGVS-----LLARDSFNLEKMRSFFSFLTPLNERV 534 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 +E+++IE Y Y +Q ++ K IPK F + +P LS E EKL +P +L Sbjct: 535 LEQIKIECKYNIYIEKQHENIAKMDSMLKVSIPKGFVFKGIPGLSLEAVEKLEKFRPKSL 594 Query: 593 LQASKIEGMTPAALNLLLIYI--KKNT 617 +AS+I G+TPA L++L +YI +KN+ Sbjct: 595 FEASEISGITPANLDVLHLYIHLRKNS 621 >gi|281353509|gb|EFB29093.1| hypothetical protein PANDA_004709 [Ailuropoda melanoleuca] Length = 709 Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust. Identities = 296/660 (44%), Positives = 418/660 (63%), Gaps = 45/660 (6%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DV+VIGGGHAG EAAA AA+ G+ T L+TH+ TIG MSCNP+ GG+GKGHL+RE+DA Sbjct: 36 NFDVVVIGGGHAGTEAAAAAARCGSRTLLLTHRVDTIGQMSCNPSFGGIGKGHLMREVDA 95 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGL R+ D +G+ +RVLN +KGPAV G R Q DR+LY+ MQ+EIL+ L V +G V Sbjct: 96 LDGLCSRICDQSGVHYRVLNRRKGPAVWGLRAQIDRKLYKQNMQKEILNTPLLAVQEGAV 155 Query: 125 AGF--------NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGD 176 + K +S +V+ D S + +VVLTTGTFLRGVI IG PAGR+GD Sbjct: 156 EDLILTDPEPEHAGKCRVSGVVLADGSTVHAESVVLTTGTFLRGVIVIGLETHPAGRLGD 215 Query: 177 SPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR 236 PS L + K F GRLKTGTP R+ +++ + KQ D IPFSF+ + + + Sbjct: 216 QPSIGLAQTLEKLGFVVGRLKTGTPPRIAKESVNFSILNKQTPDNPSIPFSFINETVWIK 275 Query: 237 ---QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQI 293 Q+ C +T TN I++EN+ ++ + GPRYCPSIE K++RF R HQ+ Sbjct: 276 PEDQLPCYLTHTNPRVDEIVLENLHLNSHVKETTR--GPRYCPSIESKVLRFPNRL-HQV 332 Query: 294 FLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRP---------------- 337 +LEPEG+++D++YP G+S LP E+Q + I I GLEK II+P Sbjct: 333 WLEPEGMDSDLIYPQGLSVTLPAELQEKMITCIKGLEKAKIIQPDKSSSVFTYFVSFILW 392 Query: 338 -GYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKL 396 GY ++YDY++P+++ P+LET + LFLAGQINGTTGYEEAAAQG++AGIN++ + + Sbjct: 393 SGYGVQYDYLDPRQITPSLETHLVQRLFLAGQINGTTGYEEAAAQGVIAGINASLRVKRK 452 Query: 397 DCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMK-LGC 455 SRT+ YIGV+IDDLT+ G EPYRMFTSRAE+R+SLRPDNAD+RLT G K +GC Sbjct: 453 PPFVVSRTEGYIGVLIDDLTTLGTNEPYRMFTSRAEFRLSLRPDNADSRLTFRGYKEVGC 512 Query: 456 IGERRQKRFAKYIQEYNFLRSLLKSLVLTS----KNLSSTSISFKQDGKTRTAYEFLSYP 511 + +RR +R + S+LKS+ +S K + + SIS + R A + L Y Sbjct: 513 VSQRRYERASWMKSSLEEGISVLKSIEFSSSKWKKLIPAASISIGKSLPLR-ALDVLKYE 571 Query: 512 DFSIQNLFSICPDA-RKFSSL--VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDF 568 + ++ L P+ +K+ + ERL+IE++Y + Q E KE++ +E +PKD Sbjct: 572 EVDMKLLAKAVPEPLKKYIKCRELAERLKIEATYESVLLHQQQEIKEVQQDEALQLPKDL 631 Query: 569 DYSSL--PALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIK---KNTVKLNEI 623 DY +L +LS E++EKL +P + AS+I G+TPAA+ LL ++K + + +NE+ Sbjct: 632 DYLTLRDVSLSYEVREKLHFSRPETIGAASRIPGVTPAAIINLLRFVKTTQQRQMAMNEL 691 >gi|116192205|ref|XP_001221915.1| hypothetical protein CHGG_05820 [Chaetomium globosum CBS 148.51] gi|88181733|gb|EAQ89201.1| hypothetical protein CHGG_05820 [Chaetomium globosum CBS 148.51] Length = 856 Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust. Identities = 281/649 (43%), Positives = 394/649 (60%), Gaps = 41/649 (6%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EA A AA+ GA TALIT + +G SCNP+ GG+GKG ++REIDAL Sbjct: 162 FDVIVIGGGHAGSEACAAAARAGARTALITPEIDNLGVCSCNPSFGGIGKGTIIREIDAL 221 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV- 124 DGL GR+ D AG+QF++LN KG AV GPR Q DR LY+ M+ E+ + NL ++ G V Sbjct: 222 DGLAGRIIDKAGVQFKILNKTKGAAVWGPRAQIDRVLYQKHMREELETYPNLSIVLGRVS 281 Query: 125 ----------AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRM 174 A + K I+ + ++ ++ + V++TTGTFL G IHIG P+GRM Sbjct: 282 DIVIADNHGDADADGAKGKITGVRLESGEVLPTTQVIITTGTFLGGEIHIGMEVYPSGRM 341 Query: 175 GDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT 234 G+ + L S F GRLKTGTP R+ +I W ++Q D+ +PFS++ D + Sbjct: 342 GEQATFGLSKSLRDAGFQLGRLKTGTPPRIAKNSINWGILDEQPGDDPPMPFSYLNDTVA 401 Query: 235 --NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQ 292 N Q+ C +T TN TH ++ N+ + +K GPRYCPS+E K++RFGER H Sbjct: 402 VGNDQLLCHLTYTNEATHEVVRANLDKTIHIRETVK--GPRYCPSLESKVIRFGERPRHI 459 Query: 293 IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF 352 ++LEPEG ++DV+YPNG+S +P E Q Q +RTI GLE +++PGY +EYDY++P+ L Sbjct: 460 VWLEPEGFDSDVIYPNGLSMTVPAEAQEQLLRTIRGLENSVMLQPGYGVEYDYVDPRSLK 519 Query: 353 PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMI 412 +LETK I GLFLAGQINGTTGYEEAA QG+VAGIN+ R + L + SR+D+YIG+MI Sbjct: 520 RSLETKAIRGLFLAGQINGTTGYEEAAGQGIVAGINAGRAAQGLPPVTLSRSDAYIGIMI 579 Query: 413 DDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYN 472 DDL +KGV EPYRMFTSR+E+R+S R DNAD RLTP G + G + + R F +Q Sbjct: 580 DDLITKGVSEPYRMFTSRSEFRLSTRSDNADTRLTPYGRQWGVVSDARWAHFRNDVQLAA 639 Query: 473 FLRSLLKSLVLTSK-----------------NLSSTSISFKQDG------KTRTAYEFLS 509 ++LL+++ LT +SST K+DG + TA + Sbjct: 640 DFKNLLRNMNLTPAEWHQAGIPISHALSSIPGVSSTKTDRKRDGHEVIRLRGITAEHIIH 699 Query: 510 --YPDFSIQNLFSICP-DARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPK 566 P + ++ + P +K+ V R+ ++ Y Y Q EA + +E +P Sbjct: 700 ARLPGLTEEDTNTKNPHHQQKYPPRVRARVAVDVVYEPYVRAQAAEAARLHRDEALGLPG 759 Query: 567 DFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 D DY ++ LS ++ LS ++P L QA +IEG+TPA L LL +++ Sbjct: 760 DLDYETVQGLSIVERDVLSRVRPETLAQARRIEGVTPAGLVKLLAAVRR 808 >gi|313206592|ref|YP_004045769.1| glucose inhibited division protein a [Riemerella anatipestifer DSM 15868] gi|312445908|gb|ADQ82263.1| glucose inhibited division protein A [Riemerella anatipestifer DSM 15868] gi|315022087|gb|EFT35116.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Riemerella anatipestifer RA-YM] gi|325335966|gb|ADZ12240.1| GidA [Riemerella anatipestifer RA-GD] Length = 620 Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust. Identities = 284/618 (45%), Positives = 386/618 (62%), Gaps = 5/618 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 MIN YDVIV+G GHAGCEAAA AA LG+ T LIT TIG MSCNPA+GG+ KG +VR Sbjct: 1 MINEVYDVIVVGAGHAGCEAAAAAANLGSKTLLITMNMETIGKMSCNPAMGGIAKGQIVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDA+ G G VAD + IQF++LN+ KGPA+ PRTQ DR L+ + + + NLD Sbjct: 61 EIDAMGGYSGIVADKSAIQFKMLNLSKGPAMWSPRTQNDRMLFAEEWRLALENTPNLDFF 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E N ++ ++ I+ +VVLT GTFL G+IH+G ++ GRMG+ + Sbjct: 121 QDMVKQLIIEGNKVAGVITSLGIEIKGKSVVLTNGTFLNGLIHVGDKQLGGGRMGEPKAF 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 + + F GR+KTGTP R+DG+T+ + K E+Q DE FS++ +Q C Sbjct: 181 GITEQLVDLGFTAGRMKTGTPPRVDGRTLDYSKMEEQPGDENPQKFSYLDTPRLTKQRSC 240 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN H I+ S +++G I+S GPRYCPSIEDKI RF ERN HQ+F+EPEG Sbjct: 241 HITYTNEIVHDILRSGFDRSPMFNGTIQSLGPRYCPSIEDKINRFAERNRHQLFVEPEGW 300 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T +Y NG S++LPE+IQ + ++ IPG E V + RPGYAIEYDY P +L TLETK I Sbjct: 301 KTIEIYVNGFSSSLPEDIQIKAMKHIPGFENVKVFRPGYAIEYDYFPPTQLNHTLETKII 360 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 L+ AGQINGTTGYEEAA QGL+AGIN+ K ++ + +R ++YIGV+IDDL +KG Sbjct: 361 ENLYFAGQINGTTGYEEAAGQGLIAGINAHNKVHEKEAFILNRDEAYIGVLIDDLITKGT 420 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT KLG E R ++ I++ L LK Sbjct: 421 EEPYRMFTSRAEYRLLLRQDNADIRLTEKSYKLGLAKEERLQKVEDKIKKSEELEDFLKD 480 Query: 481 LVLTSKNLSS--TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPD---ARKFSSLVIER 535 L K ++ SI + A + L+ P+ ++ L I +R +S V E+ Sbjct: 481 YSLKPKQINPILESIESSPVDQAYRASQILTRPNMKLELLEEIEEIKNTSRNYSDEVREQ 540 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 +I Y Y ++ ++ E IP+DFD++ + +LS E K+KL+ +KP + QA Sbjct: 541 AEINIKYRGYIEKEKENVAKLHRLENIKIPEDFDFTKINSLSAEAKQKLNSIKPKTIAQA 600 Query: 596 SKIEGMTPAALNLLLIYI 613 S+I G++PA +N+LLI++ Sbjct: 601 SRISGVSPADINVLLIFL 618 >gi|116512725|ref|YP_811632.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactococcus lactis subsp. cremoris SK11] gi|123125358|sp|Q02X03|MNMG_LACLS RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|116108379|gb|ABJ73519.1| tRNA uridine 5-carboxymethylaminomethyl modification FAD-utilizing enzyme [Lactococcus lactis subsp. cremoris SK11] Length = 625 Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust. Identities = 275/620 (44%), Positives = 380/620 (61%), Gaps = 12/620 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIGGGHAG EA+ AA++G+ T L+T + + M CNP+IGG KG +VREIDA Sbjct: 6 NYDVIVIGGGHAGVEASLAAARMGSKTLLMTINLNMVAFMPCNPSIGGSAKGIVVREIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ ++LN KGPAVR R QAD++ Y +M+ + QENL + QG V Sbjct: 66 LGGEMGRNIDKTYIQMKMLNTGKGPAVRALRAQADKDEYAASMKNTVSDQENLTLRQGMV 125 Query: 125 AGF--NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 + EK + + + V++TTGT LRG I IG+LK +G S L Sbjct: 126 EELILDDEKQKVIGVRTSTGTQYGAKAVIITTGTALRGEIIIGELKYSSGPNNSLSSIGL 185 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIEC 240 ++ + F+ GR KTGTP R+ +I +DKTE Q DE FSFM+ + QI C Sbjct: 186 ADNLHEIGFEIGRFKTGTPPRVLASSIDYDKTEIQPGDEAPNHFSFMSSDEDYLKDQIPC 245 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +T T +H I+ +N+ + ++SG +K GPRYCPSIEDKI RF ++ HQ+FLEPEG Sbjct: 246 WLTYTTENSHTILRDNLHRAPLFSGIVKGVGPRYCPSIEDKITRFADKPRHQLFLEPEGR 305 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 NT+ VY G+ST++PE++Q +++IPGLE ++RPGYAIEYD + P +L PTLETK I Sbjct: 306 NTEEVYIGGLSTSMPEDVQFDLVKSIPGLENAKMMRPGYAIEYDVVMPHQLRPTLETKLI 365 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 SGLF AGQ NGT+GYEEAA QGLVAGIN+A K R+++YIGVMIDDL +KG Sbjct: 366 SGLFTAGQTNGTSGYEEAAGQGLVAGINAALKIQGKPEFILKRSEAYIGVMIDDLVTKGT 425 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIG----ERRQKRFAKYIQEYNFLRS 476 LEPYR+ TSRAEYR+ LR DNAD RLT IG ++G + E Q + A++ +E L S Sbjct: 426 LEPYRLLTSRAEYRLILRHDNADRRLTEIGRQVGLVSDAQWEHYQAKMAQFDREMKRLNS 485 Query: 477 -LLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARK-FSSLVIE 534 LK L T + L +D T EFL P+ + A + VIE Sbjct: 486 EKLKPLPDTQEKLGKLGFGPIKD--ALTGAEFLKRPEVHYDEVIDFIGQAPEVIDRTVIE 543 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 ++ E +Y Y + M + ++ E + IPK+ D+ L +++ E ++K + P L Q Sbjct: 544 LIETEITYEGYIKKAMDQVDKMHRLEAKRIPKNMDWDKLDSIATEARQKFKKINPETLGQ 603 Query: 595 ASKIEGMTPAALNLLLIYIK 614 AS+I G+ PA +++L++Y++ Sbjct: 604 ASRISGVNPADISILMVYLE 623 >gi|312144698|ref|YP_003996144.1| glucose inhibited division protein A [Halanaerobium sp. 'sapolanicus'] gi|311905349|gb|ADQ15790.1| glucose inhibited division protein A [Halanaerobium sp. 'sapolanicus'] Length = 636 Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust. Identities = 268/624 (42%), Positives = 388/624 (62%), Gaps = 16/624 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIG GHAGCEA+ A++G T +T + M CNP++GG GK H+VREID Sbjct: 8 KEYDVIVIGAGHAGCEASLAPARMGFETLTLTVNLDHVAFMPCNPSLGGPGKSHIVREID 67 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M R D IQ R+LN KGPAV G R Q+D++ Y M+R + +Q+NLD+ Q Sbjct: 68 ALGGEMARNMDETMIQIRMLNTSKGPAVHGLRGQSDKQAYHQRMKRILENQDNLDLKQQI 127 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 E + I ++ + V+LTTGTFL+G I IG+ K AG P+N L Sbjct: 128 AEKLVVEDDEIKGVITKTGIFFAGKKVILTTGTFLKGRIIIGEAKFNAGPNQQYPANKLS 187 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 S + R KTGTP R+ +++ + K E Q ++ L FSF ++ + Q C +T Sbjct: 188 GSLKEEGISLRRFKTGTPPRVSKRSLDFSKMEPQPGEDGL-SFSFQSEPLKGEQAMCYLT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 T +TH+II EN + ++SG I+ GPRYCPSIEDK+VRF ++ HQ+F+EPEG +TD Sbjct: 247 YTTEKTHKIINENKMRTPLFSGVIEGVGPRYCPSIEDKVVRFPDKGRHQLFIEPEGADTD 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 Y +G+ST+LP ++Q + R+I GLE+V I+RPGYAIEYD ++P+EL LE KKI GL Sbjct: 307 EYYISGLSTSLPHDVQIEMARSIHGLEEVEIMRPGYAIEYDCVDPEELKLDLELKKIKGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQING++GYEEAA QG+VAGIN+A + + R+++YIGV+IDDL +KG EP Sbjct: 367 YTAGQINGSSGYEEAAGQGIVAGINAALSLQNREAMILKRSEAYIGVLIDDLVTKGTPEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYI----QEYNFLRSLLK 479 YR+ TSRAEYR+ LR DNAD RLTPIG K+G + ++R K + I + ++LR Sbjct: 427 YRIMTSRAEYRLLLRQDNADQRLTPIGRKVGLVDDKRYKNYQAKIKGVKKALDYLRDENN 486 Query: 480 SLVLTS------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVI 533 + T+ + L S ++S K T L P+ S ++L D + + V Sbjct: 487 KINPTAEVREKLEELESGNLS-----KPVTLEALLRRPELSYEDLRFFASDLPEITKEVA 541 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I+ Y Y RQ + + + E++ IP++ DYS+L L E +EKL+ +KP ++ Sbjct: 542 EQVEIQVKYKGYIDRQQAQVDQFRKMEEKKIPEELDYSNLENLRLEAREKLARVKPLSIG 601 Query: 594 QASKIEGMTPAALNLLLIYIKKNT 617 QAS+I G++PA ++ L+IY+++ T Sbjct: 602 QASRISGVSPADISALMIYLEQYT 625 >gi|22298078|ref|NP_681325.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Thermosynechococcus elongatus BP-1] gi|34222556|sp|Q8DLF8|MNMG_THEEB RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|22294256|dbj|BAC08087.1| glucose inhibited division protein [Thermosynechococcus elongatus BP-1] Length = 637 Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust. Identities = 277/629 (44%), Positives = 381/629 (60%), Gaps = 35/629 (5%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+G GHAGCEAA A+LG T L+T I CNPA+GG K LV E+DAL Sbjct: 11 FDVIVVGAGHAGCEAALATARLGCRTLLLTLNLDKIAWQPCNPAVGGPAKSQLVHEVDAL 70 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G +GRV+D +Q R+LN +GPAV R Q D+ Y M++ + +Q NL V +G V Sbjct: 71 GGEIGRVSDRTYVQKRLLNASRGPAVWALRAQTDKREYSAVMKQVVENQPNLLVREGMVT 130 Query: 126 GFNTEKN-IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + N + + RC V+LTTGTFL G I +G +PAGR G+ + L Sbjct: 131 DLVLDANDTVIGVETYFGVAFRCQAVILTTGTFLGGRIWVGNKSMPAGRAGEFAAEGLSQ 190 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSF-MTDKITNRQIECGIT 243 + + F+ RLKTGTPAR+D +++ + K E Q DE++ FSF T + Q+ C +T Sbjct: 191 TLARLGFEVDRLKTGTPARVDRRSVDYSKMEPQPPDEQVRWFSFDPTVWVERPQMNCYLT 250 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 RT ETHR+I E++ + +Y G + + GPRYCPSIEDKIVRF ++ HQIF+EPEG NT Sbjct: 251 RTTPETHRLIREHLHLTPVYGGWVDAKGPRYCPSIEDKIVRFADKESHQIFIEPEGRNTP 310 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G ST LPE +Q Q +RT+PGLE ++RP YA+EYDY+ + FPTL TKKI GL Sbjct: 311 ELYIQGFSTGLPEPLQLQLLRTLPGLENCIMLRPAYAVEYDYLPATQCFPTLMTKKIQGL 370 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQG+VAGIN+AR + I F R +SYIG +IDDL +K + EP Sbjct: 371 FCAGQINGTTGYEEAAAQGIVAGINAARFVQRKPMITFPRQESYIGTLIDDLCTKELREP 430 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGE-------RRQKRFAKYIQEYNFLR- 475 YRM TSR+EYR+ LR DNAD RLTP+G ++G + E +Q+R A Q R Sbjct: 431 YRMLTSRSEYRLVLRSDNADQRLTPLGYEIGLVSEAQWQVFQAKQRRLAAETQRLQTTRI 490 Query: 476 ----SLLKSLVLTSKNLSSTSISFKQ-DGKTRTAYEFLSY-----PDFSIQNLFSICPDA 525 + +++V + ++I+ ++ ++ YE L PD + Q Sbjct: 491 KAHEPVGEAIVTATGQAIKSAIALEELLRRSGVHYELLDRHGLGNPDLTPQEK------- 543 Query: 526 RKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 E ++I YA Y RQ E ++I +E+R +P D DY ++P LS E +EKLS Sbjct: 544 --------EAVEIAIKYAGYIERQQREIEQIARQEQRPLPVDLDYFAIPTLSMEAREKLS 595 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYIK 614 ++P + QAS+I G+ PA +N LL+Y++ Sbjct: 596 AIRPLTIGQASRIGGVNPADINALLVYLQ 624 >gi|257468580|ref|ZP_05632674.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Fusobacterium ulcerans ATCC 49185] gi|317062837|ref|ZP_07927322.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG 2 [Fusobacterium ulcerans ATCC 49185] gi|313688513|gb|EFS25348.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG 2 [Fusobacterium ulcerans ATCC 49185] Length = 628 Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust. Identities = 269/625 (43%), Positives = 384/625 (61%), Gaps = 16/625 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 +++DVIV+G GHAGCEA AA++GA TA+ T IG MSCNP++GG K HL+REID Sbjct: 2 QNFDVIVVGAGHAGCEAGLAAARMGAQTAIFTITLDNIGVMSCNPSLGGPAKSHLIREID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G MGR D IQ R+LN KKGPAVR R QAD+ Y M++ I + +NL IQG Sbjct: 62 ALGGEMGRNIDKTYIQIRILNTKKGPAVRSLRAQADKVRYSKEMKKTIENCDNLTTIQGM 121 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + + ++ R V++ TGTFLRG+IHIG GRMG+ S+ L Sbjct: 122 VTDIIIEDGKVIGVKTREGVEYRAKFVIIATGTFLRGLIHIGDKHFSGGRMGELSSDDLP 181 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFAD-ERLIPFSFMT--DKITNR-QIE 239 S K R KTGTP+R+D +T+ + K E+Q + + ++ FS T +++ R QI Sbjct: 182 LSLEKAGLKLARFKTGTPSRIDARTVDFSKIEEQPGETDDILKFSTRTPNEELEGRKQIS 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C I TN H II N + S +++G I GPRYCPSIEDK+ R+G++N H +FLE EG Sbjct: 242 CYIAHTNEIVHDIIKNNRERSPLFNGTIHGTGPRYCPSIEDKVFRYGDKNQHHLFLEREG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 +T +Y G+S++LP ++Q + ++ I GLE +I+R GYAIEYDY+ P+E+ TLE+K Sbjct: 302 YDTTEIYLGGLSSSLPTDVQDEMVKNIVGLENAHIMRYGYAIEYDYVPPQEIKYTLESKT 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 + LFLAGQINGT+GYEEA AQGL+AGIN+ RK + I R DSY+G ++DDL SKG Sbjct: 362 VENLFLAGQINGTSGYEEAGAQGLLAGINAVRKLQGKEPIILDRADSYMGTLVDDLVSKG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFT+R+EYR++LR DNAD RL+ IG ++G + E R + ++ ++ LK Sbjct: 422 TNEPYRMFTARSEYRLALREDNADLRLSKIGYEVGLLPEEEYLRVVQKGKDVEIIKEKLK 481 Query: 480 SLVLTSKNLSSTSISFK------QDGKTRTAYEFLSYPDFSIQNLFSICP----DARKFS 529 + N + K +DG T +E L PD ++ I + +S Sbjct: 482 GNYVGPSNPRVNEVLRKYGEAELKDGT--TYFELLRRPDVKYSDIKYIAELSDLELGDYS 539 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 +++++ Y+ Y R M ++ K E + +P+D DY SL + E K+KL ++P Sbjct: 540 KDTEYQVEVQVKYSGYIERSMKMIEKHKSLENKKLPEDLDYDSLENIPKEAKDKLKAVRP 599 Query: 590 FNLLQASKIEGMTPAALNLLLIYIK 614 +N+ QAS+I G++PA + +LLIY+K Sbjct: 600 YNIGQASRISGVSPADIQVLLIYLK 624 >gi|148381579|ref|YP_001256120.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium botulinum A str. ATCC 3502] gi|153930874|ref|YP_001385956.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium botulinum A str. ATCC 19397] gi|153936277|ref|YP_001389363.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium botulinum A str. Hall] gi|166222925|sp|A7FPL9|MNMG_CLOB1 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|166222926|sp|A5I815|MNMG_CLOBH RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|148291063|emb|CAL85200.1| glucose inhibited division protein A [Clostridium botulinum A str. ATCC 3502] gi|152926918|gb|ABS32418.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium botulinum A str. ATCC 19397] gi|152932191|gb|ABS37690.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium botulinum A str. Hall] Length = 625 Score = 506 bits (1303), Expect = e-141, Method: Compositional matrix adjust. Identities = 268/616 (43%), Positives = 387/616 (62%), Gaps = 9/616 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DV+VIG GHAGCEAA +A++G T + T +I M+CNP IGG KGHLVREIDAL Sbjct: 8 FDVVVIGAGHAGCEAALASARMGCKTLICTMNLDSIALMACNPNIGGTAKGHLVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG D IQ R+LN KGPAV R QAD++ Y M+ + ++N+ + Q EV Sbjct: 68 GGEMGINIDHTFIQSRMLNTSKGPAVHSLRAQADKKRYSERMKHLLEKEDNVVLRQLEVI 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + E N + ++ ++ + ++L TGT+L+G I IG + +G G P+N L S Sbjct: 128 EIDVEDNEVKGVLTKNGAYFTTKAIILCTGTYLKGKIIIGDIIYSSGPSGLYPANDLSQS 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + + R KTGTPAR++ +++ + K +Q DE+++PFSF+ +K+ QI C +T T Sbjct: 188 LLDLGINLRRFKTGTPARINKRSVDFSKMIEQPGDEKIVPFSFIHNKLDKDQISCYLTYT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 + ETH+II ENI S +Y+G I+ GPRYCPSIEDKIVRF +++ HQIF+EPEG NT+ + Sbjct: 248 SEETHKIIHENIHRSPLYNGSIEGVGPRYCPSIEDKIVRFPDKDKHQIFIEPEGENTEEL 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+S++LPE++Q + R++PGLE I+R YAIEYD I+P++L TLE K I+GL+ Sbjct: 308 YVGGMSSSLPEDVQIKMYRSVPGLENAEILRTAYAIEYDCIDPQQLDLTLEFKNINGLYG 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ NG++GYEEAAAQGL+AGIN+ K + + + R+D+YIGV+IDDL +KG EPYR Sbjct: 368 AGQFNGSSGYEEAAAQGLIAGINAVLKIKEKNPLILKRSDAYIGVLIDDLVTKGTNEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 M TSRAEYR+ LR DNAD RLT +G K+G + E R +F + L+++ +T Sbjct: 428 MMTSRAEYRLLLRQDNADLRLTELGYKVGLVKEDRYNKFLNRKKNVENEIERLRNMQITG 487 Query: 486 KN------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 K L S K K + YE + P+ + S+ S E + I Sbjct: 488 KREINEFLLEKGSTELK---KPISLYELIKRPELDYFKVESLDDKRPSLSDDEKEEINII 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + Y Y +Q+ + ++ K E RLIPK +Y + L E +KL +KP N+ QAS+I Sbjct: 545 AKYEGYINKQLEQVEQFKKYEDRLIPKSINYLDIKGLRLEAIQKLEKIKPINIGQASRIS 604 Query: 600 GMTPAALNLLLIYIKK 615 G++PA +++LLIY+++ Sbjct: 605 GVSPADISVLLIYMER 620 >gi|317179391|dbj|BAJ57179.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Helicobacter pylori F30] Length = 621 Score = 506 bits (1303), Expect = e-141, Method: Compositional matrix adjust. Identities = 281/627 (44%), Positives = 377/627 (60%), Gaps = 16/627 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M+ S D++VIGGGHAG EA+ +AAK+GA LIT TIG SCNPAIGGLGKGHL + Sbjct: 1 MVKES-DILVIGGGHAGIEASLIAAKMGARVHLITMLIDTIGLASCNPAIGGLGKGHLTK 59 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+D L G MG + D +G+Q+RVLN KGPAVRG R Q D + YR+ + +L+ NL V Sbjct: 60 EVDVLGGAMGIITDNSGLQYRVLNASKGPAVRGTRAQIDMDTYRIFARNLVLNTPNLSVS 119 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q E + + N+ + V++TTGTFL+GV+HIG+ + GR G++ SN Sbjct: 120 QEMTESLIIENGEVVGVTTNINNTYKAKKVIITTGTFLKGVVHIGEHQNQNGRFGENASN 179 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 SL + + F RLKTGT R+ G +I ++ E+ F D FS+ T Q+ C Sbjct: 180 SLALNLRELGFKVERLKTGTCPRVAGNSIDFEGLEEHFGDTNPPYFSYKTKDFNPTQLSC 239 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TNL TH+II +N + ++SG I+ GPRYCPSIEDKI RF E+ HQ+FLEP+ + Sbjct: 240 FITYTNLITHQIIRDNFHRAPLFSGQIEGIGPRYCPSIEDKINRFSEKERHQLFLEPQTI 299 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + Y NG+ST+LP ++Q + I +I GLE I R GYAIEYD+I P EL TLE KKI Sbjct: 300 HKSEYYINGLSTSLPLDVQEKVIHSIKGLENALITRYGYAIEYDFIQPTELTHTLEAKKI 359 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GL+LAGQINGTTGYEEAAAQGL+AGIN+ D R ++YIGV+IDDL +KG Sbjct: 360 KGLYLAGQINGTTGYEEAAAQGLMAGINAVLALKNQDPFILKRNEAYIGVLIDDLVTKGT 419 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DN RL +LG + + + K QE LK Sbjct: 420 NEPYRMFTSRAEYRLLLREDNTLFRLGEHAYRLGLMEKDFYEGLKKDKQEIQDHLKRLKE 479 Query: 481 LVLTS--------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV 532 VLT L I+ K DG + L+ F+++ + S + + Sbjct: 480 CVLTPSKEVLKRLNELDENPINDKVDGVS-----LLARDSFNLEKMRSFFSFLTPLNERI 534 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 +E+++IE Y Y +Q ++ K IPKDF + +P LS E EKL +P +L Sbjct: 535 LEQIKIECKYNIYIEKQHENIAKMDSMLKVSIPKDFVFKGIPGLSLEAVEKLEKFRPKSL 594 Query: 593 LQASKIEGMTPAALNLLLIYI--KKNT 617 +AS+I G+TPA L++L +YI +KN+ Sbjct: 595 FEASEISGITPANLDVLHLYIHLRKNS 621 >gi|131890132|ref|NP_001076478.1| protein MTO1 homolog, mitochondrial [Danio rerio] gi|124481809|gb|AAI33158.1| Zgc:158782 protein [Danio rerio] Length = 659 Score = 506 bits (1303), Expect = e-141, Method: Compositional matrix adjust. Identities = 282/634 (44%), Positives = 383/634 (60%), Gaps = 24/634 (3%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 + YDVIV+GGGHAG EA A A+++GA T LIT K TIG++SCNP++GG+GKGHLVREI Sbjct: 24 TQHYDVIVVGGGHAGSEAVAAASRIGAKTLLITQKIQTIGALSCNPSLGGVGKGHLVREI 83 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DALDG+MGR D AGI F +LN KGPAV G R Q DR+ Y+ MQ E+LS + +++G Sbjct: 84 DALDGVMGRAGDWAGIHFSILNRSKGPAVWGLRAQLDRQRYKDFMQSELLSTPLVTILEG 143 Query: 123 EV---------AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGR 173 V G + + + I S+VVLTTGTFL G + +G+ P GR Sbjct: 144 SVQDLLLTEADPGKPGKHKVYGICLANGGGEIHSSSVVLTTGTFLSGALFMGQNTTPGGR 203 Query: 174 MGDSPSNSLFNSFMK--FDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-- 229 MGD PS + + +K GRL+TGTP R+ +I + T D PFSF+ Sbjct: 204 MGDPPSCAGLSHNLKNVLGLKIGRLRTGTPPRIVKDSIDFSLTSVCLPDSSPTPFSFINK 263 Query: 230 -TDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGER 288 T Q+ C +T T +++ E+ ++ DIK GPRYCPSIE K++RF R Sbjct: 264 HTHCTPKEQLPCFLTYTTPGVEKVVKESSHLNSHIQQDIK--GPRYCPSIESKVLRFPGR 321 Query: 289 NGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINP 348 HQ++LEPEGL + ++YP G+S +P E+Q + IR IPGL+ I PGY ++YD++ P Sbjct: 322 Q-HQVWLEPEGLTSSLMYPQGLSMTMPLEMQLRLIREIPGLQHAKIQTPGYGVQYDFVCP 380 Query: 349 KELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYI 408 +LFP L+ K GLFLAGQINGTTGYEEAAAQGL AG+N+ R S + + SRT SYI Sbjct: 381 TQLFPWLQLKNTQGLFLAGQINGTTGYEEAAAQGLWAGVNAGRTSLSMSPLSLSRTQSYI 440 Query: 409 GVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGM-KLGCIGERRQKRF--- 464 GV+IDDL GV EPYRMFTSRAE+R SLRPDNAD RLT G ++GC+ E+R + Sbjct: 441 GVLIDDLVCHGVTEPYRMFTSRAEFRTSLRPDNADLRLTIRGFEEIGCVSEQRYNKALLV 500 Query: 465 -AKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICP 523 A Q + L+S+ S L +IS K E L Y D + Q L S Sbjct: 501 QASLKQALSTLQSIHLSAARWRDKLGGVTIS-KTKSSILNGAEVLQYKDVTFQMLASSFQ 559 Query: 524 DARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLP-ALSNELKE 582 + + ERL++E+ Y + +Q E ++++ EE +P D DY +LP +LS E++E Sbjct: 560 ELFGPHLEISERLKVEALYHPHCEKQRREMEKMQTEESLSLPNDIDYLALPISLSQEVRE 619 Query: 583 KLSILKPFNLLQASKIEGMTPAALNLLLIYIKKN 616 L ++P L A+++ G+TPAA+ L Y+ +N Sbjct: 620 ILDRVRPSTLGAAARLPGITPAAIVHLFNYVHRN 653 >gi|169832369|ref|YP_001718351.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Candidatus Desulforudis audaxviator MP104C] gi|205831505|sp|B1I6S1|MNMG_DESAP RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|169639213|gb|ACA60719.1| glucose inhibited division protein A [Candidatus Desulforudis audaxviator MP104C] Length = 657 Score = 506 bits (1303), Expect = e-141, Method: Compositional matrix adjust. Identities = 276/622 (44%), Positives = 379/622 (60%), Gaps = 17/622 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAGCEAA +A+LG T L+T + M CNPAIGG GK HLVREIDAL Sbjct: 8 YDVIVVGGGHAGCEAALASARLGCRTLLLTLSIDFVALMPCNPAIGGPGKSHLVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MGR D A IQ R+LN KGPAVR R Q D+ LY+ M+R + Q LD+ Q V Sbjct: 68 GGEMGRNTDRAAIQVRMLNTGKGPAVRALRAQTDKRLYQEGMRRTVEGQPLLDLKQAMVE 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + +V + + V++TTGT+LR + +G+ +G G P+ L + Sbjct: 128 KIIVDGGSARGVVTRTGARFLAPAVIVTTGTYLRSRVLVGETSFESGPNGQFPAVGLAAN 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIE--CGIT 243 + F+ GR KTGTP R+D +T+ + + Q DE FSF QI+ C +T Sbjct: 188 LRENGFELGRFKTGTPPRIDRRTLDFSRMTPQHGDEDCPGFSFAAGNRGKEQIQVPCWLT 247 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 T TH II EN+ S +Y+G I+ GPRYCPSIEDK+VRF +R HQ+F+EPEGL+T+ Sbjct: 248 YTTARTHEIIRENLDRSPLYTGIIQGTGPRYCPSIEDKVVRFADRERHQVFVEPEGLHTN 307 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G+ST+LPE++Q +R++PGLEKV I+R GYAIEYDY+ P +L PTLETK +SGL Sbjct: 308 EMYVQGMSTSLPEDVQLLLLRSLPGLEKVEIVRYGYAIEYDYVVPTQLAPTLETKAVSGL 367 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 FLAGQINGT+GYEEAAAQG+VAGIN+A+ + + SR +YIGV+IDDL +KG EP Sbjct: 368 FLAGQINGTSGYEEAAAQGIVAGINAAQSVKNGEPLVVSRAQAYIGVLIDDLVTKGTREP 427 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL-- 481 YR+FTSRAEYR++LR DNAD RLT ++G + +RFA Q+ + +R+ L+ L Sbjct: 428 YRIFTSRAEYRLALRQDNADLRLTERAHRIGLVSGAHYERFA---QKKDRVRAELERLDR 484 Query: 482 VLTSKNLSSTSISFKQD----------GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL 531 + L S + QD + E L P+ +L + + Sbjct: 485 TVVPDPLGRVSRAEVQDWLAARGSAPLSRPCRLSELLRRPEIRYADLVGLGVADPDVAPD 544 Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 V ++ + YA Y +Q + + E R IP D DYS + LSNE +KL+ ++P + Sbjct: 545 VAAEVENQIKYAGYIQKQAAQVARFEKLEARRIPADLDYSEVRGLSNEAAQKLAEIRPVS 604 Query: 592 LLQASKIEGMTPAALNLLLIYI 613 + QA +I G++PA + +LL+Y+ Sbjct: 605 VGQAGRISGVSPADIAVLLVYL 626 >gi|317008863|gb|ADU79443.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Helicobacter pylori India7] Length = 621 Score = 506 bits (1303), Expect = e-141, Method: Compositional matrix adjust. Identities = 283/627 (45%), Positives = 375/627 (59%), Gaps = 16/627 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M+ S D++VIGGGHAG EA +AAK+GA LIT TIG SCNPAIGGLGKGHL + Sbjct: 1 MVKES-DILVIGGGHAGIEAGLIAAKMGARVHLITMLIDTIGLASCNPAIGGLGKGHLTK 59 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+D L G MG + D +G+Q+RVLN KGPAVRG R Q D + YR+ + +L+ NL V Sbjct: 60 EVDVLGGAMGIITDNSGLQYRVLNASKGPAVRGTRAQIDMDTYRIFARNLVLNTPNLSVS 119 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q E + + + N+ + V++TTGTFL+GV+HIG+ + GR G++ SN Sbjct: 120 QEMTESLIIENDEVVGVTTNINNTYKAKKVIITTGTFLKGVVHIGEHQNQNGRFGENASN 179 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 SL + + F RLKTGT R+ G +I ++ E+ F D FS+ T Q+ C Sbjct: 180 SLALNLRELGFKVDRLKTGTCPRVAGNSIDFEGLEEHFGDTNPPYFSYKTKDFNPTQLSC 239 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN TH+II +N + ++SG I+ GPRYCPSIEDKI RF E+ HQ+FLEP+ + Sbjct: 240 FITYTNPITHQIIRDNFHRAPLFSGQIEGIGPRYCPSIEDKINRFSEKERHQLFLEPQTI 299 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 N Y NG+ST+LP ++Q + I +I GLE I R GYAIEYD+I P EL TLETKKI Sbjct: 300 NKSEYYINGLSTSLPLDVQEKVIHSIKGLENALITRYGYAIEYDFIQPTELTHTLETKKI 359 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GL+LAGQINGTTGYEEAAAQGL+AGIN+ R ++YIGV+IDDL +KG Sbjct: 360 KGLYLAGQINGTTGYEEAAAQGLMAGINAVLALKNQAPFILKRNEAYIGVLIDDLVTKGT 419 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DN RL +LG + + K K QE LK Sbjct: 420 NEPYRMFTSRAEYRLLLREDNTLFRLGEHAYRLGLMEQDFYKELKKDKQEIQDNLKRLKE 479 Query: 481 LVLTS--------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV 532 VLT L I+ K DG + L+ F+ + + S S V Sbjct: 480 CVLTPSKEVLKRLNELGENPINDKVDGVS-----LLARDSFNAEKMRSFFSFLAPLSERV 534 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 +E+++IE Y Y +Q ++ K IPK+F + +P LS E EKL +P +L Sbjct: 535 LEQIKIECKYNIYIEKQHENIAKMDSMLKVSIPKNFVFKGIPGLSLEAVEKLEKFRPKSL 594 Query: 593 LQASKIEGMTPAALNLLLIYI--KKNT 617 +AS+I G+TPA L++L +YI +KN+ Sbjct: 595 FEASEISGITPANLDVLHLYIHLRKNS 621 >gi|150024117|ref|YP_001294943.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Flavobacterium psychrophilum JIP02/86] gi|205831513|sp|A6GVK0|MNMG_FLAPJ RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|149770658|emb|CAL42122.1| Glucose inhibited division protein A [Flavobacterium psychrophilum JIP02/86] Length = 623 Score = 506 bits (1303), Expect = e-141, Method: Compositional matrix adjust. Identities = 274/629 (43%), Positives = 386/629 (61%), Gaps = 20/629 (3%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M YDVIV+G GHAGCEAAA +A LG ST L+T I MSCNPA+GG+ KG +VR Sbjct: 1 MFLEEYDVIVVGAGHAGCEAAAASANLGCSTLLVTMSLQNIAQMSCNPAMGGIAKGQIVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADR----ELYRLAMQREILSQEN 116 EIDAL G G V+D IQF++LN KGPA+ PR Q+DR E +RL ++ N Sbjct: 61 EIDALGGYSGIVSDNTAIQFKMLNKSKGPAMWSPRVQSDRMRFAEEWRLMLE----GTPN 116 Query: 117 LDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGD 176 LD Q V+G E N + I IR +VVLT GTFL G+IHIG + GR G+ Sbjct: 117 LDFYQEMVSGMVIENNKVLGIKTSLGLTIRGKSVVLTNGTFLNGLIHIGDKQFGGGRAGE 176 Query: 177 SPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN- 235 S + + +K F++GR+KTGTP R+DG+++ + K + D + P F +T Sbjct: 177 SAAYGITEDLVKAGFESGRMKTGTPPRVDGRSLDYSKMNVEAGD--INPSKFSYSDVTKP 234 Query: 236 --RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQI 293 Q +C +T T+L H I+ E + S +++G IKS GPRYCPSIEDKI RF +++ HQ+ Sbjct: 235 LVHQRDCHMTYTSLLVHDILREGFERSPMFNGRIKSLGPRYCPSIEDKINRFADKDRHQL 294 Query: 294 FLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFP 353 F+EPEG NT VY NG ST+LPE+IQ + +R++ G EKV R GYAIEYDY P +L Sbjct: 295 FVEPEGWNTCEVYVNGFSTSLPEDIQFKALRSVVGFEKVKFFRAGYAIEYDYFPPTQLKH 354 Query: 354 TLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMID 413 TLETK ISGL+ AGQINGTTGYEEAA+QGL+AGIN+A K + + + R ++YIGV+ID Sbjct: 355 TLETKLISGLYFAGQINGTTGYEEAASQGLMAGINAALKVKEKEPLILKRDEAYIGVLID 414 Query: 414 DLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNF 473 DL +KG EPYRMFTSRAE+R LR DNAD RLTP+ LG + R +R + E Sbjct: 415 DLITKGTEEPYRMFTSRAEFRTLLRQDNADFRLTPMSNTLGLASDARLRRMEHKLNESEK 474 Query: 474 LRSLLKSLVLTSKNLSSTSISFK--QDGKTRTAYEFLSYPDFSIQNLFSI-----CPDAR 526 + + K +T + I+ K + +T ++ LS P + ++ Sbjct: 475 MVAFFKETSITPTEANPVLIAKKTAEVNQTDKIFKILSRPQIDLSDVLKFENVANYVANN 534 Query: 527 KFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSI 586 ++E+ +I+ Y+ Y ++ A+++ E IP+ FDY + ++S E K+KLS Sbjct: 535 NVDQEILEQAEIQVKYSGYIDKERANAEKLTRLEDLKIPEKFDYHQIKSMSIEAKQKLSK 594 Query: 587 LKPFNLLQASKIEGMTPAALNLLLIYIKK 615 ++P + QAS+I G++P+ +++LL+++ + Sbjct: 595 IRPVTISQASRISGVSPSDISVLLVFLGR 623 >gi|293334449|ref|NP_001169694.1| hypothetical protein LOC100383575 [Zea mays] gi|224030947|gb|ACN34549.1| unknown [Zea mays] Length = 710 Score = 506 bits (1303), Expect = e-141, Method: Compositional matrix adjust. Identities = 275/620 (44%), Positives = 379/620 (61%), Gaps = 14/620 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAGCEAA +A+LGA T L+T I CNPA+GG K LV E+DAL Sbjct: 63 YDVIVVGGGHAGCEAALASARLGARTLLLTLNIDRIAWQPCNPAVGGPAKSQLVHEVDAL 122 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENL---DVIQG 122 G +G++ D +Q RVLN KGPAVR R Q D+ Y + M+ + S ENL + + Sbjct: 123 GGEIGKITDRCYLQKRVLNSSKGPAVRALRAQTDKREYAIEMKNSVESTENLFIREAMAT 182 Query: 123 EVA-GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 EV G N + + D +VVLTTGTF+ G I +G+ +PAGR G+S S+ Sbjct: 183 EVLIGKNDSIEGVRTFFGMD---FYAPSVVLTTGTFMSGKIWVGRTSMPAGRAGESASHG 239 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIEC 240 L + F+T RLKTGTP R+D +T+ + E Q DE + FSF + + Q+ C Sbjct: 240 LTENLQFLGFETDRLKTGTPPRIDRRTVDFSGLEPQHGDEEVGWFSFDPEFHVEREQMCC 299 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +TRT ETH+I+++N+ + Y G +++ GPRYCPSIEDKIVRF ++ HQIFLEPEG Sbjct: 300 YLTRTTKETHQIVIDNLDETPTYGGWVEAKGPRYCPSIEDKIVRFKDKESHQIFLEPEGR 359 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 N +Y G ST LPE +Q +RTIPGLE ++RP YA+EYDY+ + +L TKKI Sbjct: 360 NVPELYLQGFSTGLPERLQLSLVRTIPGLENCLMLRPAYAVEYDYLPAYQCSRSLMTKKI 419 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF +GQINGTTGYEEAAAQG+++GIN+AR S+ I R SYIG +IDDL +K + Sbjct: 420 EGLFFSGQINGTTGYEEAAAQGIISGINAARHSDGKSLIILERESSYIGTLIDDLVTKDL 479 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR----QKRFAKYIQEYNFLRS 476 EPYRM TSR+E+R+ LR DNAD+RLTP+G ++G I +RR Q + A+ QE LRS Sbjct: 480 REPYRMLTSRSEHRLLLRSDNADSRLTPLGREIGLIDDRRWELYQSKQARIKQEKERLRS 539 Query: 477 LLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 + +++ S +D T A L P + L S + E + Sbjct: 540 TKVPGGEFAAEVTAVSNQPVKDSSTLEA--ILKKPHVQYKLLDEHGCGNENLSRIEKECV 597 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y + RQ + +I +E R +P+D DY S+ LS E +EKLS ++P + QAS Sbjct: 598 EIDIKYEGFIARQQSQLHQIVNQEHRKLPEDLDYHSMTNLSLEAREKLSKVRPQTIGQAS 657 Query: 597 KIEGMTPAALNLLLIYIKKN 616 +I G++PA + +LLI+++ N Sbjct: 658 RIGGVSPADMTVLLIWMESN 677 >gi|167748064|ref|ZP_02420191.1| hypothetical protein ANACAC_02808 [Anaerostipes caccae DSM 14662] gi|167652056|gb|EDR96185.1| hypothetical protein ANACAC_02808 [Anaerostipes caccae DSM 14662] Length = 627 Score = 506 bits (1303), Expect = e-141, Method: Compositional matrix adjust. Identities = 270/616 (43%), Positives = 381/616 (61%), Gaps = 7/616 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD++V+G GHAGCEAA +A+LG T T +I M CNP IGG KGHLV+EIDAL Sbjct: 8 YDIVVVGAGHAGCEAALASARLGFKTICFTVSMDSIALMPCNPNIGGSSKGHLVKEIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG D IQ ++LN KGPAV R QAD+++Y +AM + + + +NL V QGEV Sbjct: 68 GGEMGVNIDKTYIQSKMLNRSKGPAVHSLRAQADKKMYSMAMTQTMGNTKNLTVRQGEVT 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 T+ ++ + ++ V+LTTGT+L+ G + G G +N L S Sbjct: 128 QILTQNGKVTGVKTYSGAVYHAKAVILTTGTYLKARCIYGDVSNETGPNGLQAANYLTQS 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 + R KTGTPAR+D +I ++K E+QF D++++PFSF + I QI C +T Sbjct: 188 LKDLGIEMRRFKTGTPARIDKNSIDFNKMEEQFGDDKIVPFSFTNTREDIQRDQISCWLT 247 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN ETH II ENI S ++SG I+ GPRYCPSIEDKIV+F ++N HQ+F+EPEG T+ Sbjct: 248 YTNEETHEIIRENIGRSPLFSGAIEGTGPRYCPSIEDKIVKFPDKNRHQVFIEPEGEYTN 307 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G+S++LPE++Q+ R++ GLE V IIR YAIEYD IN +L P+LE +KI GL Sbjct: 308 EMYVGGMSSSLPEDVQYAMYRSVTGLENVKIIRNAYAIEYDCINATQLKPSLEFRKIGGL 367 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ NG++GYEEAAAQGL+AGIN+AR + + R+ +YIGV+IDDL +K EP Sbjct: 368 FSAGQFNGSSGYEEAAAQGLIAGINAARMIQGKESLVLDRSQAYIGVLIDDLVTKETSEP 427 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF----AKYIQEYNFLRSLLK 479 YRM TSRAEYR+ LR DNAD RL+ IG ++G I E R + A+ +E N L + Sbjct: 428 YRMMTSRAEYRLLLRQDNADLRLSKIGYEMGLISEERYQNLLEKEARIEKEINRLSRVNV 487 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 ++L S S + + T E + P+ + L I PD ++ V E++ I Sbjct: 488 GASGKVQDLLSKCQSTELKS-SATMAELIRRPELTYDMLSPIDPDRPEYPEDVREQVNIN 546 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ+ + ++ K EK+ IP+ Y + L E +KLS ++P ++ QAS+I Sbjct: 547 IKYEGYIKRQLSQVRQFKRLEKKKIPEGIKYEDIGNLRIEAIQKLSKIRPASIGQASRIS 606 Query: 600 GMTPAALNLLLIYIKK 615 G++PA +++LLIY+++ Sbjct: 607 GVSPADISVLLIYLEQ 622 >gi|255322782|ref|ZP_05363924.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Campylobacter showae RM3277] gi|255300124|gb|EET79399.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Campylobacter showae RM3277] Length = 621 Score = 506 bits (1303), Expect = e-141, Method: Compositional matrix adjust. Identities = 276/617 (44%), Positives = 372/617 (60%), Gaps = 7/617 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YD+IV+GGGHAG EA+ AA++G T LIT IG+ SCNPAIGGL KGHLV+EIDA Sbjct: 2 NYDIIVVGGGHAGIEASLAAARMGKKTLLITILAEQIGAASCNPAIGGLAKGHLVKEIDA 61 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG DA GIQFRVLN KGPAVRG R Q D + YR+ M+ +L+ NL++ Q Sbjct: 62 LGGQMGLTTDAVGIQFRVLNESKGPAVRGSRAQIDMDRYRVYMRNLLLNTPNLEISQEIA 121 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 ++ I+ + + + S +++TTGTFL G+IH+G K+ AGR+G+ + +L + Sbjct: 122 TQILSQNGEITGVKTHLGNEYKTSKLIITTGTFLNGLIHVGFNKLEAGRVGELSAKNLSD 181 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S + + GRLKTGT R+D K+I + E Q DE PFSF T Q+ C I Sbjct: 182 SLRELGLEVGRLKTGTCPRVDAKSIDFSVLEIQGGDEDPSPFSFRTRDFAPTQLPCYIAY 241 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN+ TH II N + +++G I+ GPRYCPSIEDKI RFG+R+ H +F+EP+ L Sbjct: 242 TNVTTHDIIRSNFDKAPLFTGQIEGVGPRYCPSIEDKINRFGDRDRHHLFVEPQTLEATE 301 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 Y NG ST+LP E+Q +R++ G E I+R GYAIEYDY+ P EL TLETKK GL+ Sbjct: 302 YYINGFSTSLPYEVQVAMLRSVKGFENARIVRHGYAIEYDYVQPTELKHTLETKKARGLY 361 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEA AQGL+AGIN+A + + R ++YIGV+IDDL +KG EPY Sbjct: 362 LAGQINGTTGYEEAGAQGLMAGINAALALDGKEPFVLRRDEAYIGVLIDDLVTKGTKEPY 421 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL----KS 480 RMFTSRAEYR+ LR DNA RL G +LG + E ++ N R L Sbjct: 422 RMFTSRAEYRLLLREDNAVLRLGGYGRELGLLDEATFEKIEAI--RSNLTRGLELLNGTE 479 Query: 481 LVLTSKNLS-STSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + T +NL S+ + + T + ++ F+ + L + P +E++ E Sbjct: 480 ITPTKRNLELLASLDEEIISQNLTLQKIVARKSFTGEKLRKLDPFFEALDEASLEQILTE 539 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + Y Y Q + +K IP+ F + + LSNE+ EKL P L AS+I Sbjct: 540 AKYQHYIAEQKKQIDRMKDMMSVKIPEGFSFRGISGLSNEVVEKLERFAPPTLFAASEIS 599 Query: 600 GMTPAALNLLLIYIKKN 616 G+TPAA+++L IYIK N Sbjct: 600 GVTPAAIDILHIYIKMN 616 >gi|188527017|ref|YP_001909704.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Helicobacter pylori Shi470] gi|238691893|sp|B2US42|MNMG_HELPS RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|188143257|gb|ACD47674.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Helicobacter pylori Shi470] Length = 621 Score = 506 bits (1303), Expect = e-141, Method: Compositional matrix adjust. Identities = 283/627 (45%), Positives = 377/627 (60%), Gaps = 16/627 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M+ S D++VIGGGHAG EA+ +AAK+GA LIT TIG SCNPAIGGLGKGHL + Sbjct: 1 MVKES-DILVIGGGHAGIEASLIAAKMGARVHLITMLIDTIGLASCNPAIGGLGKGHLTK 59 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+D L G MG + D +G+Q+RVLN KGPAVRG R Q D + YR+ + +L+ NL V Sbjct: 60 EVDVLGGAMGIITDNSGLQYRVLNASKGPAVRGTRAQIDMDTYRIFARNLVLNTPNLSVS 119 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q E + + + N+ + V++TTGTFL+GV+HIG+ + GR G++ SN Sbjct: 120 QEMTESLIIENDEMVGVTTNINNTYKAKKVIITTGTFLKGVVHIGEHQNQNGRFGENASN 179 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 SL + + F RLKTGT R+ G +I ++ E+ F D FS+ T Q+ C Sbjct: 180 SLALNLRELGFRVERLKTGTCPRVAGNSIDFEGLEEHFGDTNPPYFSYKTKDFNPTQLSC 239 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN TH+II +N + ++SG I+ GPRYCPSIEDKI RF E+ HQ+FLEP+ + Sbjct: 240 FITYTNPITHQIIRDNFHRAPLFSGQIEGIGPRYCPSIEDKINRFSEKERHQLFLEPQTI 299 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + Y NG+ST+LP ++Q + I +I GLE I R GYAIEYD+I P EL TLETKKI Sbjct: 300 HKSEYYINGLSTSLPLDVQEKVIHSIKGLENALITRYGYAIEYDFIQPTELTHTLETKKI 359 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GL+LAGQINGTTGYEEAAAQGL+AGIN+ D R ++YIGV+IDDL +KG Sbjct: 360 KGLYLAGQINGTTGYEEAAAQGLMAGINAVLALKNQDPFILKRNEAYIGVLIDDLVTKGT 419 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DN RL +LG + E K K QE LK Sbjct: 420 NEPYRMFTSRAEYRLLLREDNTLFRLGEHAYRLGLMEEDFYKGLKKDQQEIQDNLKRLKE 479 Query: 481 LVLTS--------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV 532 VLT L I+ K DG + L+ F+++ + S + V Sbjct: 480 CVLTPSKEVLKRLNELDENPINDKVDGVS-----LLARDSFNLEKMRSFFSFLTPLNERV 534 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 +E+++IE Y Y +Q ++ K IPK F + +P LS E EKL +P +L Sbjct: 535 LEQIKIECKYNIYIEKQHENIAKMDSMLKVSIPKGFVFKGIPGLSLEAVEKLEKFRPKSL 594 Query: 593 LQASKIEGMTPAALNLLLIYI--KKNT 617 +AS+I G+TPA L++L +YI +KN+ Sbjct: 595 FEASEISGITPANLDVLHLYIHLRKNS 621 >gi|312131266|ref|YP_003998606.1| glucose inhibited division protein a [Leadbetterella byssophila DSM 17132] gi|311907812|gb|ADQ18253.1| glucose inhibited division protein A [Leadbetterella byssophila DSM 17132] Length = 620 Score = 506 bits (1303), Expect = e-141, Method: Compositional matrix adjust. Identities = 271/615 (44%), Positives = 381/615 (61%), Gaps = 8/615 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAA AA +G+ LIT TI MSCNPA+GG+ KG +VREIDAL Sbjct: 5 YDVIVVGAGHAGCEAAHAAATMGSEVLLITMNLQTIAQMSCNPAMGGVAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+ G V+D IQFR+LN KGPA+ PR Q+DR + L + ++ + Q V Sbjct: 65 GGMSGIVSDETMIQFRMLNRSKGPAMWSPRCQSDRMEFALNWRDKLERNPKVSFWQEMVT 124 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + NI+ + I TVVLT GTFL G IHIG+ GR G+S + + Sbjct: 125 DILVKDNIVYGVKTSLGLEIHAKTVVLTNGTFLNGKIHIGEKNFGGGRTGESAAFGITEK 184 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + F++GR+KTGTP R+DG+TI ++ ++Q DE FS+ +Q C I+ T Sbjct: 185 LVSLGFESGRMKTGTPPRVDGRTINYEAMQEQLGDENPEKFSYTDTPKLEKQNSCWISYT 244 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 NL H + + S +++G IK GPRYCPS+EDKI RF E++ HQIFLEPEG T + Sbjct: 245 NLAVHEELRKGFDKSPMFNGRIKGLGPRYCPSVEDKINRFAEKDSHQIFLEPEGRTTIEM 304 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG ST+LPE+IQ++ IR IPG E V ++RPGYAIEYDY P +L TLET+++ LF Sbjct: 305 YVNGFSTSLPEDIQYKAIRKIPGFENVKLLRPGYAIEYDYFPPTQLKLTLETQRVENLFF 364 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEA AQGL+AGIN+ RK+++L R ++YIGV+IDDL +KG EPYR Sbjct: 365 AGQINGTTGYEEAGAQGLIAGINAHRKAHELSAFILKRDEAYIGVLIDDLVNKGTDEPYR 424 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAE+R LR DNAD RLT G ++G + R R + I+ L L++ L+ Sbjct: 425 MFTSRAEFRTILRQDNADIRLTKKGYEIGLANKERLDRVEEKIKNSEELIHKLETTKLSP 484 Query: 486 KNLSS--TSISFKQDGKTRTAYEFLSYPDFSIQNLFS----ICPDARKFSSLVIERLQIE 539 + ++ T I+ + T + P+ I+ L + ++ E+ +I+ Sbjct: 485 EEINPYLTKINSSPLREKSTISSLIKRPEIGIKELEEGNVLVQEITNTYTKEQKEQAEIK 544 Query: 540 SSYAAYTGRQMIEAKEI-KFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 Y Y ++++ A++I K +E +L +FDY +L +LS E ++KL+ KP NL QAS+I Sbjct: 545 IKYEKYIEKELLMAEKIAKLDEVKL-NTEFDYMALKSLSIEARQKLTAAKPMNLGQASRI 603 Query: 599 EGMTPAALNLLLIYI 613 G++PA +++L++Y+ Sbjct: 604 SGVSPADISVLMLYL 618 >gi|291531940|emb|CBK97525.1| glucose-inhibited division protein A [Eubacterium siraeum 70/3] Length = 625 Score = 506 bits (1303), Expect = e-141, Method: Compositional matrix adjust. Identities = 274/614 (44%), Positives = 379/614 (61%), Gaps = 9/614 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAA AA+LG TA+ T I +M CNP IGG KG LVRE+D+L Sbjct: 7 YDVIVVGAGHAGCEAALAAARLGCKTAVFTLSLDAIANMPCNPCIGGSAKGQLVRELDSL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MGR ADA IQ R+LN KGPAV R Q+DR Y M+ + ENLD+ Q EV Sbjct: 67 GGEMGRAADATFIQSRMLNKGKGPAVHSLRVQSDRVKYHTFMKSVLEHTENLDIKQAEVT 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E I+ I + + V++TTGT+L G IHIG+L +G S + + S Sbjct: 127 EVCAENGKITGIKTRLGAFYPAGCVIITTGTYLGGKIHIGELNYQSGPDNVSAALQMTES 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 R KTGTPAR+ ++I + E+Q DE + PF F +++C +T T Sbjct: 187 LRNLGLSMRRFKTGTPARVHKRSIDFSVMEEQDGDEYITPFCFDNTFKLENKVKCYVTYT 246 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N ETHRII++N+ S +Y+G I+ GPRYCPSIEDKIVRF ++ HQ+F+EP GL+TD Sbjct: 247 NAETHRIILDNLDRSPLYAGRIQGVGPRYCPSIEDKIVRFSDKPRHQLFVEPMGLDTDEY 306 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+S++LPE++Q +F+RTI GLE V I+RP YAIEYD +P EL+PTLE KKISGLF Sbjct: 307 YLQGMSSSLPEDVQIKFLRTIKGLEHVEIMRPAYAIEYDCCDPLELYPTLEFKKISGLFG 366 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ N T+GYEEAAAQG++AG+N+A K + RT S+IG +IDDL +KG +EPYR Sbjct: 367 AGQFNCTSGYEEAAAQGVIAGMNAAMKIKGREQYISDRTTSFIGTLIDDLVTKGCVEPYR 426 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRS----LLKSL 481 M TSR+EYR+ LR DNA++RL PIG K G I + R +RF ++ N L + + K+ Sbjct: 427 MMTSRSEYRLLLRQDNANDRLVPIGHKFGLISDERYQRF---LERKNILDNETSRIKKAT 483 Query: 482 VLTSKNLSSTSISFKQDGKTRTA--YEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + L+ S T+ E L P ++L +A + +I++L+I Sbjct: 484 IYPCEELNKMLESKGTSPITQGVKFIELLKRPQIDYRDLARFDENAPELEHDIIDKLEIN 543 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y Q + +++K E++ +P D DY ++ L E +EKL+ +P N+ QA +I Sbjct: 544 IKYEGYIKTQTEKIEQMKRLEEKQLPTDIDYKTISGLRLEAQEKLNKHRPLNIGQAGRIS 603 Query: 600 GMTPAALNLLLIYI 613 G+ PA +++LLI++ Sbjct: 604 GVNPADVSVLLIWL 617 >gi|302406004|ref|XP_003000838.1| mitochondrial translation optimization protein [Verticillium albo-atrum VaMs.102] gi|261360096|gb|EEY22524.1| mitochondrial translation optimization protein [Verticillium albo-atrum VaMs.102] Length = 693 Score = 506 bits (1302), Expect = e-141, Method: Compositional matrix adjust. Identities = 254/595 (42%), Positives = 368/595 (61%), Gaps = 12/595 (2%) Query: 33 LITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVR 92 L+T K +G+ SCNP+ GG+GKG ++RE+DALDGL GRV D AGI F+ LN +KGPAV Sbjct: 72 LVTPKIDNLGTCSCNPSFGGIGKGVIIRELDALDGLSGRVIDKAGIHFQTLNRRKGPAVW 131 Query: 93 GPRTQADRELYRLAMQREILSQENLDVIQGEVAGF----NTEKNI-----ISSIVMQDNS 143 GPR Q DR+LY+ M+ E+ NL +I G V+ + I I+ + + Sbjct: 132 GPRAQIDRDLYKKHMREELEGYPNLSIILGSVSDVVLCPQEDPTIGAHSRITGVKLDSGE 191 Query: 144 MIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPAR 203 ++ + V++TTGTFL G IHIG PAGR+G++ + L S F GRLKTGTP R Sbjct: 192 ILPTTQVIITTGTFLSGEIHIGMESYPAGRIGEAATTGLSKSLRDAGFSMGRLKTGTPPR 251 Query: 204 LDGKTIIWDKTEKQFADERLIPFSFMTDKI-TNRQIECGITRTNLETHRIIMENIKHSAI 262 + GK+I + + + Q ++ PFS+M D + T++QI+C +T TN TH I+ N+ ++ Sbjct: 252 ISGKSIDFSELQPQPGEQSPTPFSYMNDTVATDKQIDCYVTYTNATTHDIVRANLGNTIH 311 Query: 263 YSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQF 322 + GPRYCPS+E KI RF ++ H ++LEPEG DVVYPNG+S +P E Q Q Sbjct: 312 IRETV--LGPRYCPSLESKITRFSDKERHIVWLEPEGFVNDVVYPNGLSMTVPPEAQEQI 369 Query: 323 IRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQG 382 IR+I G+E +++ GY +EYDYI+P+ L +LETK +SGL+LAGQINGTTGYEEAA QG Sbjct: 370 IRSIKGMENAELLQVGYGVEYDYIDPRSLKSSLETKPVSGLYLAGQINGTTGYEEAAGQG 429 Query: 383 LVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNA 442 ++AGIN+ R + L + SR D YIGVMIDDL +KGV EPYRMFT+R+EYR++ R DNA Sbjct: 430 VIAGINAGRAAKGLAAVSLSRGDGYIGVMIDDLVTKGVSEPYRMFTTRSEYRLTSRADNA 489 Query: 443 DNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTR 502 D RLT G G + + R + F+ + + L SLL+S V + + K++ + R Sbjct: 490 DYRLTAKGRDWGVVSDARWRAFSDEKMQVDELYSLLESAVKSPQEWMRHGFQVKENSQRR 549 Query: 503 TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKR 562 A E L P+ ++ + ++ P ++F + R+ IE+ YA RQ E + +E Sbjct: 550 DACEMLRLPNVTMDEIATVLPVVQRFPERIKSRVAIEALYAPMIARQTSERRNFTRDESL 609 Query: 563 LIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNT 617 +P + DY + L+ K+ L +P L QA ++EG+TP+ LL +I++ + Sbjct: 610 RLPANLDYDKVAGLAMHEKQILKTTRPETLAQARRLEGITPSGCIRLLSFIQRQS 664 >gi|217034040|ref|ZP_03439462.1| hypothetical protein HP9810_891g44 [Helicobacter pylori 98-10] gi|216943548|gb|EEC22999.1| hypothetical protein HP9810_891g44 [Helicobacter pylori 98-10] Length = 621 Score = 506 bits (1302), Expect = e-141, Method: Compositional matrix adjust. Identities = 282/627 (44%), Positives = 377/627 (60%), Gaps = 16/627 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M+ S D++VIGGGHAG EA+ +AAK+GA LIT TIG SCNPAIGGLGKGHL + Sbjct: 1 MVKES-DILVIGGGHAGIEASLIAAKMGARVHLITMLIDTIGLASCNPAIGGLGKGHLTK 59 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+D L G MG + D +G+Q+RVLN KGPAVRG R Q D + YR+ + +L+ NL+V Sbjct: 60 EVDVLGGAMGIITDNSGLQYRVLNASKGPAVRGTRAQIDMDTYRIFARNLVLNTPNLNVS 119 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q E + + + N+ + V++TTGTFL+GV+HIG+ + GR G++ SN Sbjct: 120 QEMTESLIIENDEVVGVTTNINNTYKAKKVIITTGTFLKGVVHIGEHQNQNGRFGENASN 179 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 SL + F RLKTGT R+ G +I ++ E+ F D FS+ T Q+ C Sbjct: 180 SLALNLRDLGFKVERLKTGTCPRVAGNSIDFEGLEEHFGDTNPPYFSYKTKDFNPTQLSC 239 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN TH+II +N + ++SG I+ GPRYCPSIEDKI RF E+ HQ+FLEP+ + Sbjct: 240 FITYTNPITHQIIRDNFHRAPLFSGQIEGIGPRYCPSIEDKINRFSEKERHQLFLEPQTI 299 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + Y NG+ST+LP ++Q + I +I GLE I R GYAIEYD+I P EL TLETKKI Sbjct: 300 HKSEYYINGLSTSLPLDVQEKVIHSIKGLENALITRYGYAIEYDFIQPTELTHTLETKKI 359 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GL+LAGQINGTTGYEEAAAQGL+AGIN+ D R ++YIGV+IDDL +KG Sbjct: 360 KGLYLAGQINGTTGYEEAAAQGLMAGINAVLALKNQDPFILKRNEAYIGVLIDDLVTKGT 419 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DN RL +LG + E + K QE LK Sbjct: 420 NEPYRMFTSRAEYRLLLREDNTLFRLGEHAYRLGLMEEDFYEGLKKDKQEIQDHLKRLKE 479 Query: 481 LVLTS--------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV 532 VLT L I+ K DG + L+ F+++ + S + V Sbjct: 480 CVLTPSKEVLKRLNELDENPINDKVDGVS-----LLARDSFNLEKMRSFFSFLTPLNERV 534 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 +E+++IE Y Y +Q ++ K IPK F + +P LS E EKL +P +L Sbjct: 535 LEQIKIECKYNIYIEKQHENIAKMDSMLKVSIPKGFVFKGIPGLSLEAVEKLEKFRPKSL 594 Query: 593 LQASKIEGMTPAALNLLLIYI--KKNT 617 +AS+I G+TPA L++L +YI +KN+ Sbjct: 595 FEASEISGITPANLDVLHLYIHLRKNS 621 >gi|160941471|ref|ZP_02088806.1| hypothetical protein CLOBOL_06362 [Clostridium bolteae ATCC BAA-613] gi|158435617|gb|EDP13384.1| hypothetical protein CLOBOL_06362 [Clostridium bolteae ATCC BAA-613] Length = 631 Score = 506 bits (1302), Expect = e-141, Method: Compositional matrix adjust. Identities = 266/622 (42%), Positives = 384/622 (61%), Gaps = 11/622 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +YDV+++G GHAGCEAA +A+LG T + T +I M CNP IGG KGHLVRE Sbjct: 11 LEETYDVVIVGAGHAGCEAALASARLGMETIMFTVSVDSIALMPCNPNIGGSSKGHLVRE 70 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DAL G MG+ D IQ ++LN KGPAV R QAD++ Y M+R + + E+L + Q Sbjct: 71 LDALGGEMGKNIDKTFIQSKMLNESKGPAVHSLRAQADKQDYSRHMRRTLENTEHLTIRQ 130 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 EV+ E I + ++ V+L TGT+L+ G + P G G +N Sbjct: 131 AEVSEIMAEDGKIRGVKTFSGAVYYAKAVILCTGTYLKARCIYGDVSNPTGPNGLQAANH 190 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIE 239 L +S + + R KTGTPAR+D K+I + K E+QF D R++PFSF T D+I Q+ Sbjct: 191 LTDSLREHGIEMFRFKTGTPARVDKKSIDFSKMEEQFGDLRIVPFSFSTNPDEIQKDQVS 250 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +T TN THRII +N+ S ++SG I+ GPRYCPSIEDK+V+F ++N HQ+F+EPEG Sbjct: 251 CWLTYTNENTHRIIKDNLDRSPLFSGAIEGTGPRYCPSIEDKVVKFPDKNRHQVFVEPEG 310 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T+ +Y G+S++LPE++Q+ RT+PGLEKV I+R YAIEYD IN +L PTLE KK Sbjct: 311 LYTNEMYLGGMSSSLPEDVQYAMYRTVPGLEKVKIVRNAYAIEYDCINALQLKPTLEFKK 370 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 ISGLF GQ NG++GYEEAA QG +AG+N+ K + + R+ +YIGV+IDDL +K Sbjct: 371 ISGLFAGGQFNGSSGYEEAAVQGFMAGVNAVMKIRGQEAVVLDRSQAYIGVLIDDLVTKE 430 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRM TSRAEYR+ LR DNAD RL IG ++G + + + + +++ + ++S +K Sbjct: 431 NHEPYRMMTSRAEYRLLLRQDNADIRLRKIGHEIGLVCD---EEYEHLLRKMDDIQSEIK 487 Query: 480 SLVLTSKNLSSTSISFKQD-GKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVI 533 L T +S F ++ G T T E + P+ L + + V Sbjct: 488 RLEKTVIGVSDRVQMFLENYGSTLLKSGITLAELVKRPELDYVKLAELDEGRPELPDDVR 547 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E++ IE Y Y RQM + + K E + +P+DFDYS + +L E +KL+ ++P + Sbjct: 548 EQVNIEIKYEGYIKRQMQQVAQFKKLEDKKLPEDFDYSEVNSLRREAVQKLNKVQPATIG 607 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I G++PA +++LL++ + Sbjct: 608 QASRISGVSPADISVLLVHFTR 629 >gi|322807966|emb|CBZ05541.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium botulinum H04402 065] Length = 625 Score = 506 bits (1302), Expect = e-141, Method: Compositional matrix adjust. Identities = 271/619 (43%), Positives = 390/619 (63%), Gaps = 15/619 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DV+VIG GHAGCEAA +A++G T + T +I M+CNP IGG KGHLVREIDAL Sbjct: 8 FDVVVIGAGHAGCEAALASARMGCKTLICTMNLDSIALMACNPNIGGTAKGHLVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG D IQ R+LN KGPAV R QAD++ Y M+ + ++N+ + Q EV Sbjct: 68 GGEMGINIDHTFIQSRMLNTSKGPAVHSLRAQADKKRYSERMKHLLEKEDNVILRQLEVI 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + E N + ++ ++ + ++L TGT+L+G I IG + +G G P+N L S Sbjct: 128 EIDVEDNEVKGVLTKNGAYFTTKAIILCTGTYLKGKIIIGDIIYSSGPSGLYPANDLSQS 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + + R KTGTPAR++ +++ + K +Q DE+++PFSF+ +K+ QI C +T T Sbjct: 188 LLDLGINLRRFKTGTPARINKRSVDFSKMIEQPGDEKIVPFSFIHNKLDKDQISCYLTYT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 + ETH+II ENI S +Y+G I+ GPRYCPSIEDKIVRF +++ HQIF+EPEG NT+ + Sbjct: 248 SEETHKIIYENIHRSPLYNGSIEGVGPRYCPSIEDKIVRFPDKDKHQIFIEPEGENTEEL 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+S++LPE++Q + R++PGLE I+R YAIEYD I+P++L TLE K I+GL+ Sbjct: 308 YVGGMSSSLPEDVQIKMYRSVPGLENAEILRTAYAIEYDCIDPQQLDLTLEFKNINGLYG 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ NG++GYEEAAAQGL+AGIN+ K + + + R+D+YIGV+IDDL +KG EPYR Sbjct: 368 AGQFNGSSGYEEAAAQGLIAGINAVLKIKEKNPLMLKRSDAYIGVLIDDLVTKGTNEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 M TSRAEYR+ LR DNAD RLT +G K+G + E R +F + L+++ +T Sbjct: 428 MMTSRAEYRLLLRQDNADLRLTELGYKVGLVKEDRYNKFLNRKKNVENEIERLRNMQITG 487 Query: 486 KN------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV---IERL 536 K L S K K + YE + P+ + F + P K SL E + Sbjct: 488 KREINEFLLEKGSTELK---KPISLYELIKRPEL---DYFKVEPLDDKRPSLSDDEKEEI 541 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 I + Y Y +Q+ + ++ K E RLIPK +Y + L E +KL +KP N+ QAS Sbjct: 542 NIIAKYEGYINKQLEQVEQFKKYEDRLIPKSINYLDIKGLRLEAIQKLEKIKPINIGQAS 601 Query: 597 KIEGMTPAALNLLLIYIKK 615 +I G++PA +++LLIY+++ Sbjct: 602 RISGVSPADISVLLIYMER 620 >gi|167766871|ref|ZP_02438924.1| hypothetical protein CLOSS21_01388 [Clostridium sp. SS2/1] gi|317499288|ref|ZP_07957561.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lachnospiraceae bacterium 5_1_63FAA] gi|167711419|gb|EDS21998.1| hypothetical protein CLOSS21_01388 [Clostridium sp. SS2/1] gi|291558410|emb|CBL37210.1| glucose-inhibited division protein A [butyrate-producing bacterium SSC/2] gi|316893457|gb|EFV15666.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lachnospiraceae bacterium 5_1_63FAA] Length = 627 Score = 506 bits (1302), Expect = e-141, Method: Compositional matrix adjust. Identities = 276/622 (44%), Positives = 383/622 (61%), Gaps = 11/622 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + YD+IV+G GHAGCEAA AA++G T T ++ M CNP IGG KGHLV+E Sbjct: 4 LEEKYDIIVVGAGHAGCEAALAAARMGFETICFTVSMDSVALMPCNPNIGGSSKGHLVKE 63 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G MG+ D +Q ++LN KGPAV R QAD+++Y ++M + + + NL + Q Sbjct: 64 IDALGGEMGKNIDKTYLQSKMLNKSKGPAVHSLRAQADKKMYSISMTQVMGNTPNLTLRQ 123 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 GEV E I + ++ VVLTTGT+L+ G++ G G +N Sbjct: 124 GEVTEILVEDGKIKGVKTYSGAVYYAKAVVLTTGTYLKARCIYGEVSNHTGPNGLQAANY 183 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIE 239 L +S R KTGTPAR+D TI + K +QF DER++PFSF + I QI Sbjct: 184 LTDSLKSHGISMRRFKTGTPARIDKNTIDFSKMAEQFGDERIVPFSFTNKEEDIKRDQIS 243 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +T T ETH II ENI S ++SG I+ GPRYCPSIEDKIV+F ++N HQ+F+EPEG Sbjct: 244 CWLTYTTEETHEIIKENIHRSPLFSGAIEGTGPRYCPSIEDKIVKFPDKNRHQVFIEPEG 303 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 T+ +Y G+S++LPE++Q++ ++PGLE I+R YAIEYD I+ +L +LE K+ Sbjct: 304 EYTNEMYVGGMSSSLPEDVQYKMYHSVPGLENAKIVRNAYAIEYDCIDATQLKASLEFKE 363 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF GQ NG++GYEEAAAQGL+AGIN+ARK + D I R+ +YIGV+IDDL +K Sbjct: 364 IDGLFSGGQFNGSSGYEEAAAQGLMAGINAARKLQEKDPIILDRSQAYIGVLIDDLVTKE 423 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIG-ERRQKRFAKYIQEYNFLRSLL 478 EPYRM TSRAEYR+ LR DNAD RLT IG + G I ER K K Q + ++ L Sbjct: 424 TQEPYRMMTSRAEYRLLLRQDNADLRLTKIGYEAGLISQERYDKLLVKEQQIEDEMKRLE 483 Query: 479 KSLVLTSKNLSST-----SISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVI 533 V SKN+ S S + K K E + P+ + +L I P+ ++ V Sbjct: 484 DINVGASKNVQSLLEELGSTTLKSSAKMT---ELIRRPELTYMDLAPIDPERPEYDLDVQ 540 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E++ I Y Y RQ+ + K+ K EK+ IP+D DY + +L E K+KLS ++P ++ Sbjct: 541 EQVNINIKYEGYIKRQLSQVKQFKKMEKKRIPEDIDYEDVGSLRIEAKQKLSKIRPSSIG 600 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I G++PA +++LLIY+++ Sbjct: 601 QASRISGVSPADISVLLIYLEQ 622 >gi|308063074|gb|ADO04961.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Helicobacter pylori Sat464] Length = 621 Score = 506 bits (1302), Expect = e-141, Method: Compositional matrix adjust. Identities = 283/627 (45%), Positives = 376/627 (59%), Gaps = 16/627 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M+ S D++VIGGGHAG EA+ +AAK+GA LIT TIG SCNPAIGGLGKGHL + Sbjct: 1 MVKES-DILVIGGGHAGIEASLIAAKMGARAHLITMLIDTIGLASCNPAIGGLGKGHLTK 59 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+D L G MG + D +G+Q+RVLN KGPAVRG R Q D + YR+ + +L+ NL V Sbjct: 60 EVDVLGGAMGIITDNSGLQYRVLNASKGPAVRGTRAQIDMDTYRIFARNLVLNTPNLSVS 119 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q E + + + N+ + V++TTGTFL+GV+HIG + GR G++ SN Sbjct: 120 QEMTESLIIENDEVVGVTTNINNTYKAKKVIITTGTFLKGVVHIGTHQNQNGRFGENASN 179 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 SL + + F RLKTGT R+ G +I ++ E+ F D FS+ T Q+ C Sbjct: 180 SLALNLRELGFKVERLKTGTCPRVAGNSIDFEGLEEHFGDTNPPYFSYKTKDFNPTQLSC 239 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN TH+II +N + ++SG I+ GPRYCPSIEDKI RF E+ HQ+FLEP+ + Sbjct: 240 FITYTNPITHQIIRDNFHRAPLFSGQIEGIGPRYCPSIEDKINRFSEKERHQLFLEPQTI 299 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + Y NG+ST+LP ++Q + I +I GLE I R GYAIEYD+I P EL TLETKKI Sbjct: 300 HKSEYYINGLSTSLPLDVQEKVIHSIKGLENALITRYGYAIEYDFIQPTELTHTLETKKI 359 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GL+LAGQINGTTGYEEAAAQGL+AGIN+ D R ++YIGV+IDDL +KG Sbjct: 360 KGLYLAGQINGTTGYEEAAAQGLMAGINAVLALKNQDPFILKRNEAYIGVLIDDLVTKGT 419 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DN RL +LG + E K K QE LK Sbjct: 420 NEPYRMFTSRAEYRLLLREDNTLFRLGEHAYRLGLMEEDFYKGLKKDQQEIQDNLKRLKE 479 Query: 481 LVLTS--------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV 532 VLT L I+ K DG + L+ F+++ + S + V Sbjct: 480 CVLTPSKEVLKRLNELDENPINDKVDGVS-----LLARDSFNLEKMRSFFSFLTPLNERV 534 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 +E+++IE Y Y +Q ++ K IPK F + +P LS E EKL +P +L Sbjct: 535 LEQIKIECKYNIYIEKQHENIAKMDSMLKVSIPKGFVFKGIPGLSLEAVEKLEKFRPKSL 594 Query: 593 LQASKIEGMTPAALNLLLIYI--KKNT 617 +AS+I G+TPA L++L +YI +KN+ Sbjct: 595 FEASEISGITPANLDVLHLYIHLRKNS 621 >gi|168181109|ref|ZP_02615773.1| glucose-inhibited division protein A [Clostridium botulinum NCTC 2916] gi|226951094|ref|YP_002806185.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Clostridium botulinum A2 str. Kyoto] gi|182668094|gb|EDT80073.1| glucose-inhibited division protein A [Clostridium botulinum NCTC 2916] gi|226843485|gb|ACO86151.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium botulinum A2 str. Kyoto] Length = 625 Score = 506 bits (1302), Expect = e-141, Method: Compositional matrix adjust. Identities = 271/619 (43%), Positives = 390/619 (63%), Gaps = 15/619 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DV+VIG GHAGCEAA +A++G T + T +I M+CNP IGG KGHLVREIDAL Sbjct: 8 FDVVVIGAGHAGCEAALASARMGCKTLICTMNLDSIALMACNPNIGGTAKGHLVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG D IQ R+LN KGPAV R QAD++ Y M+ + +EN+ + Q EV Sbjct: 68 GGEMGINIDHTFIQSRMLNTSKGPAVHSLRAQADKKRYSERMKHLLEKEENVVLRQLEVI 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + E N + ++ ++ + ++L TGT+L+G I IG + +G G P+N L S Sbjct: 128 EIDVEDNEVKGVLTKNGAYFTTKAIILCTGTYLKGKIIIGDIIYSSGPSGLYPANDLSQS 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + + R KTGTPAR++ +++ + K +Q D++++PFSF+ +K+ QI C +T T Sbjct: 188 LLDLGINLRRFKTGTPARINKRSVDFSKMIEQPGDKKIVPFSFIDNKLDKDQISCYLTYT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 + ETH+II ENI S +Y+G I+ GPRYCPSIEDKIVRF +++ HQIF+EPEG NT+ + Sbjct: 248 SEETHKIIHENIHRSPLYNGSIEGVGPRYCPSIEDKIVRFPDKDKHQIFIEPEGENTEEL 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+S++LPE++Q + R++PGLE I+R YAIEYD I+P++L TLE K I+GL+ Sbjct: 308 YVGGMSSSLPEDVQIKMYRSVPGLENAEILRTAYAIEYDCIDPQQLDLTLEFKNINGLYG 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ NG++GYEEAAAQGL+AGIN+ K + + + R+D+YIGV+IDDL +KG EPYR Sbjct: 368 AGQFNGSSGYEEAAAQGLIAGINAVLKIKEKNPLILKRSDAYIGVLIDDLVTKGTNEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 M TSRAEYR+ LR DNAD RLT +G K+G + E R +F + L+++ +T Sbjct: 428 MMTSRAEYRLLLRQDNADLRLTELGYKVGLVKEDRYNKFLNRKKNVENEIERLRNMQITG 487 Query: 486 KN------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV---IERL 536 K L S K K + YE + P+ + F + P K SL E + Sbjct: 488 KREINEFLLEKGSTELK---KPISLYELIKRPEL---DYFKVEPLDDKRPSLSDDEKEEI 541 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 I + Y Y +Q+ + ++ K E RLIPK +Y + L E +KL +KP N+ QAS Sbjct: 542 NIIAKYEGYINKQLEQVEQFKKYEDRLIPKSINYLDIKGLRLEAIQKLEKIKPINIGQAS 601 Query: 597 KIEGMTPAALNLLLIYIKK 615 +I G++PA +++LLIY+++ Sbjct: 602 RISGVSPADISVLLIYMER 620 >gi|308061566|gb|ADO03454.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Helicobacter pylori Cuz20] Length = 621 Score = 505 bits (1301), Expect = e-141, Method: Compositional matrix adjust. Identities = 283/627 (45%), Positives = 376/627 (59%), Gaps = 16/627 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M+ S D++VIGGGHAG EA+ +AAK+GA LIT TIG SCNPAIGGLGKGHL + Sbjct: 1 MVKES-DILVIGGGHAGIEASLIAAKMGARVHLITMLIDTIGLASCNPAIGGLGKGHLTK 59 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+D L G MG + D +G+Q+RVLN KGPAVRG R Q D + YR+ + +L+ NL V Sbjct: 60 EVDVLGGAMGIITDNSGLQYRVLNASKGPAVRGTRAQIDMDTYRIFARNLVLNTPNLSVS 119 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q E + + + N+ + V++TTGTFL+GV+HIG+ + GR G++ SN Sbjct: 120 QEMTESLIIENDEVVGVTTNINNTYKAKKVIITTGTFLKGVVHIGEHQNQNGRFGENASN 179 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 SL + + F RLKTGT R+ G +I ++ E+ F D FS+ T Q+ C Sbjct: 180 SLALNLRELGFKVERLKTGTCPRVAGNSIDFEGLEEHFGDTNPPYFSYKTKDFNPTQLSC 239 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN TH+II +N + ++SG I+ GPRYCPSIEDKI RF E+ HQ+FLEP+ + Sbjct: 240 FITYTNPITHQIIRDNFHRAPLFSGQIEGIGPRYCPSIEDKINRFSEKERHQLFLEPQTI 299 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + Y NG+ST+LP ++Q + I +I GLE I R GYAIEYD+I P EL TLETKKI Sbjct: 300 HKSEYYINGLSTSLPLDVQEKVIHSIKGLENALITRYGYAIEYDFIQPTELTHTLETKKI 359 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GL+LAGQINGTTGYEEAAAQGL+AGIN+ D R ++YIGV+IDDL KG Sbjct: 360 KGLYLAGQINGTTGYEEAAAQGLMAGINAVLALKNQDPFILKRNEAYIGVLIDDLVIKGT 419 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DN RL +LG + E K K QE LK Sbjct: 420 NEPYRMFTSRAEYRLLLREDNTLFRLGEHAYRLGLMEEDFYKGLKKDQQEIQDNLKRLKE 479 Query: 481 LVLTS--------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV 532 VLT L I+ K DG + L+ F+++ + S + V Sbjct: 480 CVLTPSKEVLKRLNELDENPINDKVDGVS-----LLARDSFNLEKMRSFFSFLTPLNERV 534 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 +E+++IE Y Y +Q ++ K IPK F + +P LS E EKL +P +L Sbjct: 535 LEQIKIECKYNIYIEKQHENIAKMDSMLKVSIPKGFVFKGIPGLSLEAVEKLEKFRPKSL 594 Query: 593 LQASKIEGMTPAALNLLLIYI--KKNT 617 +AS+I G+TPA L++L +YI +KN+ Sbjct: 595 FEASEISGITPANLDVLHLYIHLRKNS 621 >gi|167770826|ref|ZP_02442879.1| hypothetical protein ANACOL_02179 [Anaerotruncus colihominis DSM 17241] gi|167666866|gb|EDS10996.1| hypothetical protein ANACOL_02179 [Anaerotruncus colihominis DSM 17241] Length = 642 Score = 505 bits (1301), Expect = e-141, Method: Compositional matrix adjust. Identities = 274/621 (44%), Positives = 387/621 (62%), Gaps = 14/621 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YD+ VIGGGHAG EAA AA+LGA T L T IG+M CNP+IGG KGHLVREIDA Sbjct: 14 TYDIAVIGGGHAGIEAALAAARLGAHTVLFTMSLDAIGNMPCNPSIGGTAKGHLVREIDA 73 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR ADA +Q R+LN KGPAV R Q DR+ Y M+ + +Q+ LDVIQ E+ Sbjct: 74 LGGEMGRAADATMLQSRMLNRGKGPAVHSLRAQTDRKDYHRYMKYAVENQDRLDVIQAEI 133 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + S+V ++ V+L TGT+LRG I +G+ +G G ++ L Sbjct: 134 VDIRASDGAVESVVTALGALYHARAVILCTGTYLRGRIFVGEYTAQSGPDGLHAADQLTA 193 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KITNRQIECGI 242 + + R KTGTPAR D ++I + E Q D+ + PFSF TD + NR + C I Sbjct: 194 ALERLGLPLRRFKTGTPARADRRSIDFQLLEVQEGDDPITPFSFETDGGMLKNRAV-CHI 252 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 TN +THR+I+EN+ S +YSG I+ GPRYCPSIEDK+VRF ++ HQIF+EP GL+T Sbjct: 253 AYTNEQTHRVILENLHRSPLYSGQIEGIGPRYCPSIEDKVVRFSDKPRHQIFIEPMGLDT 312 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+S++LPEE+Q + RT+ G E++ I+R YAIEYD ++P L TLE K + G Sbjct: 313 NEVYLQGMSSSLPEEVQVKLYRTVKGFEQIRIMRNAYAIEYDCLDPTCLQATLECKAVRG 372 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQ NGT+GYEEAAAQGL+AGIN+AR + R SYIG +IDDL KG + Sbjct: 373 LYGAGQFNGTSGYEEAAAQGLIAGINAARAVQGKTPLVLDRASSYIGTLIDDLVVKGCND 432 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL- 481 PYRM TSR+EYR+ LR DNAD RLTPIG ++G IG +R+A ++++ + ++ L Sbjct: 433 PYRMMTSRSEYRLILRQDNADMRLTPIGYEIGLIG---AERWAAFLKKRELVEGEIRRLR 489 Query: 482 ---VLTSKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSICPDARKFSSLVIER 535 S+ L++ +S ++ T E L P S +L P+ + + V E+ Sbjct: 490 AVHTAPSEKLNALLVS-RETSPIATGIRLCELLKRPQLSYASLAPFDPERPELPAQVCEQ 548 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I Y Y +Q+ + ++++ E + +P D DY S+ L E EKL+ L+P N+ QA Sbjct: 549 VEITIKYEGYIKKQLEQVEQMRRLEGKQLPGDLDYQSIGGLRLEAVEKLTRLRPLNIGQA 608 Query: 596 SKIEGMTPAALNLLLIYIKKN 616 S+I G++PA +++LLI++ ++ Sbjct: 609 SRISGVSPADVSVLLIWLSQH 629 >gi|167759570|ref|ZP_02431697.1| hypothetical protein CLOSCI_01927 [Clostridium scindens ATCC 35704] gi|167662797|gb|EDS06927.1| hypothetical protein CLOSCI_01927 [Clostridium scindens ATCC 35704] Length = 634 Score = 505 bits (1301), Expect = e-141, Method: Compositional matrix adjust. Identities = 271/626 (43%), Positives = 380/626 (60%), Gaps = 25/626 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+VIG GHAGCEAA A+LG T + T +I M CNP IGG KGHLVREIDAL Sbjct: 15 YDVVVIGAGHAGCEAALATARLGYQTMVFTVSVESIALMPCNPNIGGSSKGHLVREIDAL 74 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+V D IQ ++LN KGPAV R QAD+ Y M++ + +Q+NLD+ Q EV Sbjct: 75 GGEMGKVIDQTFIQSKMLNKSKGPAVHSLRAQADKAWYSRTMRQVLENQDNLDIKQDEVV 134 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 ++ ++ + ++ C V+L TGT+LR G + G G +N L + Sbjct: 135 KILVDEGKVTGVQTFSGTIYPCRAVILCTGTYLRSRCIYGDVSNYTGPNGLQAANYLTDC 194 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KITNRQIECGIT 243 R KTGTPAR+D ++ + K E+QF DE++IPFSF TD + Q C +T Sbjct: 195 LEDLGIKMYRFKTGTPARIDKNSVDFSKMEEQFGDEKVIPFSFTTDPKDVQIDQSSCWLT 254 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II +N+ S ++SG I+ GPRYCPSIEDK+V+F +++ HQ+F+EPEGL T+ Sbjct: 255 YTNPRTHEIIRKNLDRSPLFSGMIEGTGPRYCPSIEDKVVKFADKDRHQVFIEPEGLETN 314 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G+S++LPE++Q++ RT+PGLE V I+R YAIEYD I+ ++L P+LE K ISGL Sbjct: 315 EMYIGGMSSSLPEDVQYEMYRTVPGLENVKIVRNAYAIEYDCIDARQLRPSLEFKNISGL 374 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + GQ NG++GYEEAAAQGL+AGIN+ARK + I R+ +YIGV+IDDL +K EP Sbjct: 375 YSGGQFNGSSGYEEAAAQGLIAGINAARKLQGKESIILDRSQAYIGVLIDDLVTKESHEP 434 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRM TSRAEYR+ LR DNAD RLT IG ++G I E KR+ + +++ ++ +K L Sbjct: 435 YRMMTSRAEYRLLLRQDNADQRLTRIGYEVGLISE---KRYHRLLEKEELIQKEVKRLTH 491 Query: 484 TS-----------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI--CPDARKFSS 530 S K+ ST +S T E + P+ S + L I C Sbjct: 492 ASVGANEKVQNLLKSYESTPLS-----SGSTVAELIRRPELSYEMLADIDECRPVLPEEL 546 Query: 531 LVIERLQIESS--YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 QI S Y Y RQ + ++ K E + IP+D DY+ + +L E +KL + Sbjct: 547 EEEVVEQINISIKYDGYISRQKKQVEQFKKLENKKIPEDIDYNLVKSLRLEALQKLKEYR 606 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIK 614 P ++ QAS+I G++PA +++LL+Y++ Sbjct: 607 PASIGQASRISGVSPADISVLLVYLE 632 >gi|114568075|ref|YP_755229.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|122317084|sp|Q0ATU6|MNMG_SYNWW RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|114339010|gb|ABI69858.1| glucose inhibited division protein A [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 624 Score = 505 bits (1301), Expect = e-141, Method: Compositional matrix adjust. Identities = 261/622 (41%), Positives = 379/622 (60%), Gaps = 11/622 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SY+VIVIG GHAGCEAA +A++G T L+T I M CNP+IGG K +VREIDA Sbjct: 7 SYEVIVIGAGHAGCEAALASARMGCQTLLVTMSIDHIALMPCNPSIGGPAKAQVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D A +Q R +N KGPAV+ R QAD+ Y L M + + +Q+ LD++ EV Sbjct: 67 LGGEMALNIDKANVQIRTINTGKGPAVQALRAQADKRQYHLEMLKTLFNQKKLDILMAEV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + +IV + + C +VLTTGT+L+G I +G + G P+ L Sbjct: 127 EDIELSAGRVKAIVTRTGARFECQALVLTTGTYLKGRIIVGDISFDGGPGNQFPAARLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S + GR KTGTP R+D K++ + K +Q D+R + FSF++ I Q+ C +T Sbjct: 187 SLKRMGLRLGRFKTGTPPRIDSKSVDFSKMIEQPGDKRPLRFSFISPLINRPQLPCWLTH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 +N +TH+I+M N+ + +Y+G IK G RYCPS EDK+VRF ++ HQ+F+EPEG +TD Sbjct: 247 SNKKTHQIVMNNLDRAPMYTGIIKGIGTRYCPSFEDKVVRFSHKDSHQLFIEPEGRDTDE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G++T+LPE++Q + +++IPGLE V I+R GYAIEYD I P +L +LE K + GLF Sbjct: 307 MYVQGLNTSLPEDVQIEVLKSIPGLENVRIMRTGYAIEYDIIYPSQLKLSLECKTVEGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAAAQGL+AGIN+A + + + R+++YI VMIDDL +K ++EPY Sbjct: 367 TAGQINGTSGYEEAAAQGLIAGINAALQVKEKEPFILKRSEAYIAVMIDDLINKEIVEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT G ++G + + R+ Y Q+ L L + Sbjct: 427 RLLTSRAEYRLLLRQDNADLRLTEKGRQIGLVDD---NRWMAYQQKEEILEVESNELKFS 483 Query: 485 SKNLSSTSISFKQDGKTRTA-------YEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 S + ++ GK A +E L P+ SI + R ++E+L+ Sbjct: 484 SFTPADEEMADFLSGKNTAAIRDRVSLWELLRRPELSIYDYVEKGW-LRDNDPDILEQLE 542 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I++ Y Y +Q + K + E ++IP D +Y + LS E +KL I+ P ++ QAS+ Sbjct: 543 IQAKYEGYIEKQKEQVKRFEKLENKMIPPDINYDEVYGLSQEAVQKLKIILPASVGQASR 602 Query: 598 IEGMTPAALNLLLIYIKKNTVK 619 I G+ PA +N+LLI+++K K Sbjct: 603 IAGVNPADINVLLIFLEKKRRK 624 >gi|19705044|ref|NP_602539.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|22095722|sp|Q8RI88|MNMG2_FUSNN RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG 2; AltName: Full=Glucose-inhibited division protein A 2 gi|19712960|gb|AAL93838.1| Glucose inhibited division protein A [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 633 Score = 505 bits (1301), Expect = e-141, Method: Compositional matrix adjust. Identities = 274/630 (43%), Positives = 381/630 (60%), Gaps = 21/630 (3%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +D+IV+GGGHAGCEAA +A++G TA+ T TIG MSCNP++GG K HL REID Sbjct: 2 QEFDIIVVGGGHAGCEAALASARMGMKTAIFTISLDTIGVMSCNPSLGGPAKSHLAREID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G MGR D IQ RVLN +KGPAVR R QAD+ Y M++ + +NL VIQG Sbjct: 62 ALGGEMGRNIDKTFIQIRVLNTRKGPAVRSLRAQADKMAYANEMKKTLEHTDNLSVIQGM 121 Query: 124 VAGFNTEKN----IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 V+ E+ II I +++ + V++ TGTFLRG+IHIG++ AGRMG+ S Sbjct: 122 VSELVVEEENGKKIIKGIKIREGLEYKAKAVIIATGTFLRGLIHIGEINFSAGRMGELSS 181 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADE-RLIPFSFMT---DKITN 235 L S K R KTGTP R+DG+TI + E+Q D+ +++ FS T D ++ Sbjct: 182 EELPLSLEKIGLKLERFKTGTPTRIDGRTIDYSVLEEQPGDKSQVLKFSNRTKDEDALSR 241 Query: 236 RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFL 295 RQI C I TN + H II + S +++G I+ GPRYCPSIEDKI R+ ++N H +FL Sbjct: 242 RQISCYIAHTNEKVHEIIRNAKERSPLFNGTIQGLGPRYCPSIEDKIFRYPDKNQHHLFL 301 Query: 296 EPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTL 355 E EG T+ +Y G+S++LP ++Q + ++ I G E I+R YAIEYDY+ P+E+ TL Sbjct: 302 EREGYETNEIYLGGLSSSLPVDVQEEMLKNIKGFENAKIMRYAYAIEYDYVPPEEIKYTL 361 Query: 356 ETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDL 415 E++ + LFLAGQINGT+GYEEA AQGL+AGIN+ RK + + R DSYIG +IDDL Sbjct: 362 ESRTVENLFLAGQINGTSGYEEAGAQGLMAGINAVRKLRNEEPVILDRADSYIGTLIDDL 421 Query: 416 TSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLR 475 SKG EPYRMFT+R+EYR+ LR DNAD RLT +G +LG + E +R K ++ + Sbjct: 422 VSKGTNEPYRMFTARSEYRLYLREDNADLRLTKLGYELGLVPEEEYQRVEKKRKDVKIIT 481 Query: 476 SLLKSLVLTSKNLSSTSISFK------QDGKTRTAYEFLSYPDFSIQNLFSICP-----D 524 +L + N I K +DG T E L P+ S +++ I D Sbjct: 482 EILAKTNVGPSNPRVNEILLKRGENPIKDGS--TLLELLRRPEVSFEDIKYISEEIRGID 539 Query: 525 ARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKL 584 + + +++I Y Y R + ++ K E + IP D DY L + E K+KL Sbjct: 540 LQGYDHDTTYQVEITVKYEGYINRALKMIEKHKSMENKKIPVDIDYDDLKTIPKEAKDKL 599 Query: 585 SILKPFNLLQASKIEGMTPAALNLLLIYIK 614 +KP N+ QAS+I G++PA + +LIY+K Sbjct: 600 KRIKPINIGQASRISGVSPADIQAILIYLK 629 >gi|306834572|ref|ZP_07467685.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus bovis ATCC 700338] gi|304423374|gb|EFM26527.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus bovis ATCC 700338] Length = 634 Score = 505 bits (1301), Expect = e-141, Method: Compositional matrix adjust. Identities = 268/617 (43%), Positives = 377/617 (61%), Gaps = 8/617 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAG EA+ AA++G T L T + M CNPAIGG KG +VREIDA Sbjct: 8 NYDVIVVGAGHAGVEASLAAARMGCKTMLATINLEMLSFMPCNPAIGGSAKGIVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ ++LN KGPAVR R QAD+ LY M+ + QENL + Q + Sbjct: 68 LGGEMGKNIDKTYIQMKMLNTGKGPAVRALRAQADKALYSRTMKHTVEQQENLTLRQSMI 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + N VV+TTGT LRG I +G+LK +G S L + Sbjct: 128 EEVLVEDGKVVGVRTATNQKFSAKAVVITTGTALRGEIILGELKYSSGPNNSLASIGLAD 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGI 242 + + + GR KTGTP R+ +I +D+TE Q DE+ FSFM+ + QI C + Sbjct: 188 NLKELGLEIGRFKTGTPPRIKASSINYDETEIQPGDEKPNHFSFMSNDEDYLKDQIPCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +H II +N+ + ++SG +K GPRYCPSIEDK+VRF ++ HQ+FLEPEG T Sbjct: 248 TYTNQTSHDIINKNLYRAPMFSGIVKGVGPRYCPSIEDKVVRFADKERHQLFLEPEGRET 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q + I +I GLE ++R GYAIEYD + P +L TLETKKISG Sbjct: 308 EEVYIQGLSTSLPEDVQKELIHSIKGLENAEMMRTGYAIEYDIVLPHQLRATLETKKISG 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQ NGT+GYEEAA QG+VAGIN+A K + R+D+YIGVMIDDL +KG LE Sbjct: 368 LFTAGQTNGTSGYEEAAGQGIVAGINAALKVQGKPEMILKRSDAYIGVMIDDLVTKGTLE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYR+ TSRAEYR+ LR DNAD RLT IG ++G + + R +RF ++++ + L +L Sbjct: 428 PYRLLTSRAEYRLILRHDNADMRLTEIGHRVGLVDDERYQRFLNRKRQFDNELTRLSTLK 487 Query: 483 L---TSKNLSSTSISFKQDGKTRTAYEFLSYPD--FSIQNLFSICPDARKFSSLVIERLQ 537 + N ++ FK TA EF+ P+ + I F + P K S V+E L+ Sbjct: 488 IKPVKETNARIEALGFKPLTDALTAKEFMRRPEINYDIATSF-VGPAEEKLDSKVVELLE 546 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 E Y Y + + + ++K E++ IP + D+ + +++ E +K + P + QAS+ Sbjct: 547 TEIKYEGYINKALDQVAKMKRMEEKRIPANIDWDDIDSIATEACQKFKKINPETIGQASR 606 Query: 598 IEGMTPAALNLLLIYIK 614 I G+ PA +++L++Y++ Sbjct: 607 ISGVNPADISILMVYLE 623 >gi|241949319|ref|XP_002417382.1| mitochondrial tRNA modification protein, putative [Candida dubliniensis CD36] gi|223640720|emb|CAX45033.1| mitochondrial tRNA modification protein, putative [Candida dubliniensis CD36] Length = 694 Score = 505 bits (1301), Expect = e-141, Method: Compositional matrix adjust. Identities = 267/631 (42%), Positives = 389/631 (61%), Gaps = 29/631 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 + VIVIGGGHAGCEAA +A+ T LIT + IG+ SCNP++GG+GKG L+RE+DAL Sbjct: 38 HPVIVIGGGHAGCEAATGSARSQTPTTLITPYINKIGTASCNPSMGGVGKGTLLREVDAL 97 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DG+ R+ D AGI FR+LN +G AV GPR Q DR++Y MQ+EIL+ NL V++ +V Sbjct: 98 DGVSARITDKAGIHFRILNASRGAAVHGPRAQIDRKIYLEEMQKEILNYPNLKVLEAQVE 157 Query: 126 GFNTEKNI------------ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGR 173 E + + +++ D +++ VV+TTGTFL G IHIG P+GR Sbjct: 158 DIIIEPVLNGEDFSGRAFGEVKGVILSDGRVLKSEKVVVTTGTFLGGEIHIGLKCFPSGR 217 Query: 174 MGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI 233 MG+ + L + + F GRLKTGTP RL +TI + +Q +D P S+M DK+ Sbjct: 218 MGEDATFGLSKTLKQAGFRLGRLKTGTPPRLSSRTIDFKGLIEQPSDFPPQPMSYMNDKV 277 Query: 234 --TNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGH 291 ++ ++C T+TN E H+II +N+ S +K GPRYCPSIE K+++F ++ H Sbjct: 278 DLEDQLMKCYQTKTNPEFHKIIADNLDKSIHIRESVK--GPRYCPSIESKVIKFPNKDYH 335 Query: 292 QIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKEL 351 ++LEPEGL++D++YPNGIS +PEEIQ + +R +PG E V + +PGY +EYD+I+P+EL Sbjct: 336 YVWLEPEGLDSDLIYPNGISCTMPEEIQEKLVRLMPGCENVTMTQPGYGVEYDFIDPREL 395 Query: 352 FPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 TLETK ++GL+LAGQINGTTGYEEAAAQG VAGIN+ + + R D + ++ Sbjct: 396 KSTLETKLVNGLYLAGQINGTTGYEEAAAQGCVAGINAGLSYLQKPLLELKRPDGLVAIL 455 Query: 412 IDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEY 471 IDDL +KGV EPYRMFTSR+E+R S+R DNADNRLT G LG + ERR + F K ++ Sbjct: 456 IDDLITKGVEEPYRMFTSRSEFRFSIRSDNADNRLTQKGYDLGVVSERRYQFFKKESDQF 515 Query: 472 NFLRSLLKSLVLTSKNLSSTSISFKQDGKTR---TAYEFLSYPDFSIQNLF--------S 520 ++++L L L+ K + K D + + ++ LSYP SI NL Sbjct: 516 WEIKNVLSELKLSGKQWAPGLQGLKTDTRENDKVSGWKLLSYPGVSINNLLPHMSDFMGQ 575 Query: 521 ICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPAL--SN 578 + P + S + ++ + S Y R+ + + +P++F Y + +L S+ Sbjct: 576 VPPCLQNVSMRLQNKIDVVSDYDPIMYREKANLNTFESLDMYKLPQNFTYDNSGSLKISH 635 Query: 579 ELKEKLSILKPFNLLQASKIEGMTPAALNLL 609 E+ L+I++P + QA ++G+TP A+N L Sbjct: 636 EVCTILNIVQPTTIGQAQSLQGITPTAINEL 666 >gi|210134414|ref|YP_002300853.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Helicobacter pylori P12] gi|226700963|sp|B6JKE5|MNMG_HELP2 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|210132382|gb|ACJ07373.1| glucose inhibited division protein A [Helicobacter pylori P12] Length = 621 Score = 505 bits (1301), Expect = e-141, Method: Compositional matrix adjust. Identities = 282/627 (44%), Positives = 375/627 (59%), Gaps = 16/627 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M+ S D++VIGGGHAG EA+ +AAK+GA LIT TIG SCNPAIGGLGKGHL + Sbjct: 1 MVKES-DILVIGGGHAGIEASLIAAKMGARVHLITMLIDTIGLASCNPAIGGLGKGHLTK 59 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+D L G MG + D +G+Q+RVLN KGPAVRG R Q D + YR+ + +L+ NL V Sbjct: 60 EVDVLGGAMGIITDNSGLQYRVLNASKGPAVRGTRAQIDMDTYRILARNLVLNTPNLSVS 119 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q E I + N+ + V++TTGTFL+GV+HIG+ + GR G++ SN Sbjct: 120 QEMTESLIVENGEIVGVTTNINNTYKAKKVIITTGTFLKGVVHIGEHQNQNGRFGENASN 179 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 SL + + F RLKTGT R+ G +I ++ E+ F D FS+ T Q+ C Sbjct: 180 SLALNLRELGFKVERLKTGTCPRVAGNSIDFEGLEEHFGDTNPPYFSYKTKDFNPTQLSC 239 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN TH+II +N + ++SG I+ GPRYCPSIEDKI RF E+ HQ+FLEP+ + Sbjct: 240 FITYTNPITHQIIRDNFHRAPLFSGQIEGIGPRYCPSIEDKINRFSEKERHQLFLEPQTI 299 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + Y NG+ST+LP ++Q + I +I GLE I R GYAIEYD+I P EL TLETKKI Sbjct: 300 HKSEYYINGLSTSLPLDVQEKVIHSIKGLENALITRYGYAIEYDFIQPTELTHTLETKKI 359 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GL+LAGQINGTTGYEEAAAQGL+AGIN+ R ++YIGV+IDDL +KG Sbjct: 360 KGLYLAGQINGTTGYEEAAAQGLMAGINAVLALKNQAPFILKRNEAYIGVLIDDLVTKGT 419 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DN RL +LG + E K K Q L+ Sbjct: 420 NEPYRMFTSRAEYRLLLREDNTLFRLGEHAYRLGLMEEDFYKELKKDQQAIQENLKRLRE 479 Query: 481 LVLTS--------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV 532 VLT L I+ K DG + L+ F+++ + S + V Sbjct: 480 CVLTPSKEVLKRLNELDENPINDKVDGVS-----LLARDSFNLEKMRSFFSFLAPLNERV 534 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 +E+++IE Y Y +Q ++ K IPKDF + +P LS E EKL +P +L Sbjct: 535 LEQIKIECKYNIYIEKQHENIAKMDSMLKVSIPKDFVFKGIPGLSLEAVEKLEKFRPKSL 594 Query: 593 LQASKIEGMTPAALNLLLIYI--KKNT 617 +AS+I G+TPA L++L +YI +KN+ Sbjct: 595 FEASEISGITPANLDVLHLYIHLRKNS 621 >gi|197302261|ref|ZP_03167320.1| hypothetical protein RUMLAC_00988 [Ruminococcus lactaris ATCC 29176] gi|197298692|gb|EDY33233.1| hypothetical protein RUMLAC_00988 [Ruminococcus lactaris ATCC 29176] Length = 630 Score = 505 bits (1301), Expect = e-141, Method: Compositional matrix adjust. Identities = 273/617 (44%), Positives = 374/617 (60%), Gaps = 13/617 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV V+G GHAGCEAA A+LG T + T +I M CNP IGG KGHLVRE+DAL Sbjct: 15 YDVAVVGAGHAGCEAALATARLGFKTVMFTVSVDSIALMPCNPNIGGSSKGHLVRELDAL 74 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+V D IQ ++LN KGPAV R QAD+ Y M++ + QENLD+ Q EV Sbjct: 75 GGEMGKVIDRTFIQSKMLNSSKGPAVHSLRAQADKANYSRTMRQVLQKQENLDIRQMEVT 134 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 TE I+ + ++ RC VVL TGT+L+ G++ G G +N L +S Sbjct: 135 ELLTEDGKITGVQTYSGAIYRCRAVVLCTGTYLKARCIYGEISTHTGPNGLQSANYLTDS 194 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KITNRQIECGIT 243 R KTGTPAR+D +I + K E+Q DER++PFSF TD + Q C +T Sbjct: 195 LKALGIRMYRFKTGTPARIDKTSIDFTKMEEQKGDERVVPFSFTTDPESVQIDQASCWLT 254 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II N+ S ++SG I+ GPRYCPSIEDK+V+F ++N HQ+F+EPEG T Sbjct: 255 YTNERTHEIIRSNLNRSPLFSGAIEGTGPRYCPSIEDKVVKFPDKNRHQVFIEPEGNETT 314 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G+S++LPE++Q++ R++PGLE IIR YAIEYD I+ ++L TLE K I GL Sbjct: 315 EMYVGGMSSSLPEDVQYEMYRSVPGLEHAKIIRNAYAIEYDCIDARQLKSTLEFKAIEGL 374 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F GQ NG++GYEEAAAQGL+AGIN+ARK + I R+ YIGV+IDDL +K EP Sbjct: 375 FSGGQFNGSSGYEEAAAQGLIAGINAARKLQGKEGIVIDRSQGYIGVLIDDLVTKESHEP 434 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF-------AKYIQEYNFLRS 476 YRM TSRAEYR+ LR DNAD RL+ IG ++G I + R R AK I+ N + Sbjct: 435 YRMMTSRAEYRLLLRQDNADIRLSAIGHEVGLIDDERYARLLKKEELIAKEIERVNHVN- 493 Query: 477 LLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 L + K L + + G T E + P+ S + L + + V E++ Sbjct: 494 -LGTSEAVQKLLEAYGSTPLTSGTTLA--ELIRRPELSYEKLAPVDNARPELPYDVKEQV 550 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 I Y Y RQM + ++ K E + IP++ DY S+ +L E K+KL+ ++P ++ QAS Sbjct: 551 DINIKYDGYIKRQMRQVEQFKKLENKRIPENIDYDSIQSLRLEAKQKLNQIRPASIGQAS 610 Query: 597 KIEGMTPAALNLLLIYI 613 +I G++PA +++LL+Y+ Sbjct: 611 RISGVSPADISVLLVYL 627 >gi|21675089|ref|NP_663154.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Chlorobium tepidum TLS] gi|30580424|sp|Q8KA85|MNMG_CHLTE RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|21648330|gb|AAM73496.1| glucose inhibited division protein A [Chlorobium tepidum TLS] Length = 621 Score = 505 bits (1300), Expect = e-141, Method: Compositional matrix adjust. Identities = 268/625 (42%), Positives = 376/625 (60%), Gaps = 20/625 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAA A+ G LIT S + MSCNPAIGG+ KG + REIDAL Sbjct: 2 YDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDAL 61 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ DA GIQFR+LN KGPA+ PR QAD+ Y L M+R + + N+D++Q V Sbjct: 62 GGEMGKAIDATGIQFRMLNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQDTVI 121 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGR-MGDSPSNSLFN 184 G + SS+ ++ I+ +L GTFL G+IHIG P GR + P L Sbjct: 122 GVSANSGKFSSVTVRSGRAIQAKAAILACGTFLNGLIHIGMDHFPGGRSTAEPPVEGLTE 181 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGIT 243 S F GRLKTGTP R+D +++ + +Q D +PFSF + + NR + C +T Sbjct: 182 SLASLGFSFGRLKTGTPPRIDSRSVDYTIVTEQPGDVDPVPFSFSSTSVANRNLVSCYLT 241 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 +T +TH I+ S +++G ++ GPRYCPSIEDKI RF +++ H IFLEPEG +T Sbjct: 242 KTTEKTHDILRTGFDRSPLFTGKVQGVGPRYCPSIEDKISRFPDKSSHHIFLEPEGTDTV 301 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y NG ST+LPE+IQ +R+IPGLE+ +IRPGYAIEYD+ +P ++ T+ET+ + L Sbjct: 302 EMYVNGFSTSLPEDIQIAGLRSIPGLEEAKMIRPGYAIEYDFFHPWQIRSTMETRPVENL 361 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGT+GYEEAAAQGL+AGIN+ RK + I R +YIGV+IDDL +K EP Sbjct: 362 FFAGQINGTSGYEEAAAQGLMAGINAVRKILGKELIVLGRDQAYIGVLIDDLITKETKEP 421 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTS AE+R+ LR DNAD RL IG + R I+ ++K+ + Sbjct: 422 YRMFTSSAEHRLILRHDNADLRLRKIGYDCNLVSSDDLHRTESIIKRVQHCLEVMKTAKV 481 Query: 484 TSKNLSSTSISFK-QDGKTRT-AYEFLSYPDFSIQNLF-----------SICPDARKFSS 530 T +++ ++ Q+ KT A + P S+Q++ +C D R Sbjct: 482 TPAEINTLLMNKGLQELKTPARALSLIKRPGISLQDILEHSLSVRSAAEELCNDPR---- 537 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 V E++QIE Y Y R+ + A I + IP +F+Y SL +LS+E +EKL +P Sbjct: 538 -VAEQVQIEIKYEGYIKREQLVADRIARLDSLHIPDNFNYDSLNSLSSEGREKLLKHRPA 596 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 + QAS+I G++P+ +++L+I + + Sbjct: 597 TIGQASRILGVSPSDVSILMIRLGR 621 >gi|20809124|ref|NP_624295.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Thermoanaerobacter tengcongensis MB4] gi|254479395|ref|ZP_05092728.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Carboxydibrachium pacificum DSM 12653] gi|22095715|sp|Q8R6K9|MNMG2_THETN RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG 2; AltName: Full=Glucose-inhibited division protein A 2 gi|20517804|gb|AAM25899.1| NAD/FAD-utilizing enzyme apparently involved in cell division [Thermoanaerobacter tengcongensis MB4] gi|214034664|gb|EEB75405.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Carboxydibrachium pacificum DSM 12653] Length = 633 Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust. Identities = 270/619 (43%), Positives = 383/619 (61%), Gaps = 14/619 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV V+G GHAG EAA +A+LG +T I M+CNP+IGG K LVREIDAL Sbjct: 8 YDVCVVGLGHAGSEAALASARLGLATVGFATNLDAIALMACNPSIGGPAKAQLVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D + +Q R LN KGPAVR R Q D++LY+ M+ + Q+NLD+ Q E+ Sbjct: 68 GGEMAVNTDKSLLQMRTLNTSKGPAVRSLRAQVDKKLYQANMKHTLERQKNLDIKQAEIV 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E N + +V + ++ +C ++TTGTFLRG + IG++ +G G P+ L + Sbjct: 128 DILVENNKVVGVVTKLGAIYKCKACIITTGTFLRGRVIIGEVGFESGPSGLFPAKELSEA 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + F R T TP R+D +T+ + K Q DE + PFSFM DKI QI C +T T Sbjct: 188 IKRLGFKMMRFNTSTPPRVDKRTVDFSKMIMQPGDEVITPFSFMHDKIEIEQIPCWLTYT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N +TH+II +NI + +Y+G+++ G RYCPSIEDK+++F R+ HQIF+EPEG +T + Sbjct: 248 NEKTHKIIRDNIHRAPLYTGEVEGVGVRYCPSIEDKVMKFPHRDRHQIFVEPEGRDTYEM 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+ ++ PE++Q + + TIPGLE I+RP YAIEYD I+P +L TLETK + GL+ Sbjct: 308 YIQGLFSSFPEDLQMEILSTIPGLENAKIMRPAYAIEYDCIDPTQLKATLETKLVEGLYF 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ+NGT+GYEEAAAQGL+AGIN+A K + R+ +YIG++IDDL +KG EPYR Sbjct: 368 AGQVNGTSGYEEAAAQGLMAGINAALKILGKPPLILDRSQAYIGILIDDLVTKGTNEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFA-KYIQEYNFLRSLLKSLVLT 484 M TSRAEYR+ LR DNAD RLT IG ++G + E R ++F K IQ + L +V Sbjct: 428 MLTSRAEYRLILRQDNADFRLTEIGKEIGLVTEERYEKFLRKKIQLEKEMMRLPTVMVRP 487 Query: 485 SKNLSSTSISFKQDGKTRTA-----YEFLSYPDF---SIQNLFSICPDARKFSSLVIERL 536 ++ +++ IS G T Y L P+ S + L PD V E++ Sbjct: 488 TEEVNNFLIS---RGSTPLVSGVDLYTLLKRPEIDYKSTKFLDPTRPD--DILDSVAEQI 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 I Y Y +Q+ + ++ K E + IP+D DY + LSNE KEKLS ++P ++ QAS Sbjct: 543 DINIKYEGYILKQLRQVEQFKAMENKKIPEDIDYYQVHGLSNEAKEKLSKIRPTSVGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKK 615 +I G++PA +++LLIY+++ Sbjct: 603 RISGVSPADISVLLIYLQQ 621 >gi|192988505|pdb|3CP8|A Chain A, Crystal Structure Of Gida From Chlorobium Tepidum gi|192988506|pdb|3CP8|B Chain B, Crystal Structure Of Gida From Chlorobium Tepidum gi|192988507|pdb|3CP8|C Chain C, Crystal Structure Of Gida From Chlorobium Tepidum gi|192988508|pdb|3CP8|D Chain D, Crystal Structure Of Gida From Chlorobium Tepidum Length = 641 Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust. Identities = 268/625 (42%), Positives = 376/625 (60%), Gaps = 20/625 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAA A+ G LIT S + MSCNPAIGG+ KG + REIDAL Sbjct: 22 YDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDAL 81 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ DA GIQFR+LN KGPA+ PR QAD+ Y L M+R + + N+D++Q V Sbjct: 82 GGEMGKAIDATGIQFRMLNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQDTVI 141 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGR-MGDSPSNSLFN 184 G + SS+ ++ I+ +L GTFL G+IHIG P GR + P L Sbjct: 142 GVSANSGKFSSVTVRSGRAIQAKAAILACGTFLNGLIHIGMDHFPGGRSTAEPPVEGLTE 201 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGIT 243 S F GRLKTGTP R+D +++ + +Q D +PFSF + + NR + C +T Sbjct: 202 SLASLGFSFGRLKTGTPPRIDSRSVDYTIVTEQPGDVDPVPFSFSSTSVANRNLVSCYLT 261 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 +T +TH I+ S +++G ++ GPRYCPSIEDKI RF +++ H IFLEPEG +T Sbjct: 262 KTTEKTHDILRTGFDRSPLFTGKVQGVGPRYCPSIEDKISRFPDKSSHHIFLEPEGTDTV 321 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y NG ST+LPE+IQ +R+IPGLE+ +IRPGYAIEYD+ +P ++ T+ET+ + L Sbjct: 322 EMYVNGFSTSLPEDIQIAGLRSIPGLEEAKMIRPGYAIEYDFFHPWQIRSTMETRPVENL 381 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGT+GYEEAAAQGL+AGIN+ RK + I R +YIGV+IDDL +K EP Sbjct: 382 FFAGQINGTSGYEEAAAQGLMAGINAVRKILGKELIVLGRDQAYIGVLIDDLITKETKEP 441 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTS AE+R+ LR DNAD RL IG + R I+ ++K+ + Sbjct: 442 YRMFTSSAEHRLILRHDNADLRLRKIGYDCNLVSSDDLHRTESIIKRVQHCLEVMKTAKV 501 Query: 484 TSKNLSSTSISFK-QDGKTRT-AYEFLSYPDFSIQNLF-----------SICPDARKFSS 530 T +++ ++ Q+ KT A + P S+Q++ +C D R Sbjct: 502 TPAEINTLLMNKGLQELKTPARALSLIKRPGISLQDILEHSLSVRSAAEELCNDPR---- 557 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 V E++QIE Y Y R+ + A I + IP +F+Y SL +LS+E +EKL +P Sbjct: 558 -VAEQVQIEIKYEGYIKREQLVADRIARLDSLHIPDNFNYDSLNSLSSEGREKLLKHRPA 616 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 + QAS+I G++P+ +++L+I + + Sbjct: 617 TIGQASRILGVSPSDVSILMIRLGR 641 >gi|57505416|ref|ZP_00371344.1| glucose inhibited division protein A [Campylobacter upsaliensis RM3195] gi|57016241|gb|EAL53027.1| glucose inhibited division protein A [Campylobacter upsaliensis RM3195] Length = 616 Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust. Identities = 277/618 (44%), Positives = 377/618 (61%), Gaps = 15/618 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IVIGGGHAG EA+A AAK+G T L+T IG+ SCNPAIGGL KGHLV+E+DA+ Sbjct: 2 YDIIVIGGGHAGIEASAAAAKMGKKTLLLTTLIEQIGAASCNPAIGGLAKGHLVKELDAM 61 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLMG + D AGIQFR+LN KG AVRG R Q D + YR+ + ++L +NL++ Q +V Sbjct: 62 GGLMGEITDEAGIQFRILNESKGVAVRGSRAQIDMDRYRIIARNKLLQLKNLEISQEQVI 121 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + + I + N ++LTTGTFL G+IHIG+ +I AGR+G+ S L NS Sbjct: 122 KLIFKNDEIKGVRTNLNHNYYAKKLILTTGTFLNGLIHIGENQIEAGRVGEMASIKLGNS 181 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 K D GRLKTGT R+D K+I + E Q D PFSF T + Q+ C I RT Sbjct: 182 LRKLDLKIGRLKTGTCPRVDAKSIDFSVLEIQHGDVEPKPFSFRTKNFSPTQLPCFIART 241 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 NL TH+II +N + +++G I+ GPRYCPSIEDKI RF ++ H +F+EP+ Sbjct: 242 NLNTHQIIKDNFYRAPLFTGQIEGVGPRYCPSIEDKINRFSDKESHHLFIEPQTKEASEY 301 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG ST+LP E+Q Q +++I G E I R GYAIEYDYI+P EL+ +LE KK+ L+ Sbjct: 302 YINGFSTSLPYEVQTQMLKSIKGFENAKITRFGYAIEYDYIDPTELYHSLELKKVKNLYC 361 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAAAQG +AGIN+A + R ++YIGV+IDDL KG EPYR Sbjct: 362 AGQINGTTGYEEAAAQGFMAGINAALALEDREPFVLGRDEAYIGVLIDDLVMKGTKEPYR 421 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQE----YNFLRSLLKSL 481 MFTSRAE+R+ LR +NA RL G K G + E+ + K + NFL L K L Sbjct: 422 MFTSRAEFRLLLREENAIIRLGKYGFKFGLLSEKEFQMIEKSRENIERGLNFL--LTKEL 479 Query: 482 VLTSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 +++N + K+ G+ + + + ++ F + L + + ++ + Sbjct: 480 TPSNEN----NAFLKELGEEKITSIVSLQKVVARASFDVGKLRKLDSFFENMDAYSLQEI 535 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 E+ Y Y Q + +++K IP DFD+ ++ LSNE+ EKL +P L AS Sbjct: 536 LSEAKYYHYITMQKAQVEKMKDLSSLKIPADFDFKNVSGLSNEVVEKLEKFRPPTLFAAS 595 Query: 597 KIEGMTPAALNLLLIYIK 614 +I G+TPAAL++L IYIK Sbjct: 596 EISGITPAALDILHIYIK 613 >gi|315925603|ref|ZP_07921813.1| glucose inhibited division protein A [Pseudoramibacter alactolyticus ATCC 23263] gi|315621144|gb|EFV01115.1| glucose inhibited division protein A [Pseudoramibacter alactolyticus ATCC 23263] Length = 624 Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust. Identities = 264/617 (42%), Positives = 377/617 (61%), Gaps = 9/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD IVIG GHAGCEAA A++G T L+ ++ M CNP+IGG GKGHLVREIDAL Sbjct: 8 YDTIVIGAGHAGCEAALATARMGKETLLLAINLDSVAMMPCNPSIGGTGKGHLVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ DA IQ R+LN KGPAV R QAD++ Y+ M+ + + E+L + Q E Sbjct: 68 GGEMGKNIDATMIQCRMLNTGKGPAVHSLRAQADKKAYQFRMKAVVENTEHLTLRQQEAT 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E I + + + C T V+ TGT+L+G I +G+++ G G P+ L +S Sbjct: 128 KLIVEDQKIVGVQVVTGATYTCETCVVCTGTYLKGKIFMGEVQYEGGPNGMFPARFLSDS 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + F R KTGTPAR+D KT+ + K Q DE + PFSF T+ I QI+C +T T Sbjct: 188 LEEAGFHLQRFKTGTPARVDAKTLDYTKMIVQKGDEIITPFSFETEAIAIDQIDCYLTYT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N THRII N+ S + +GD+ GPRYCPSIE K++RF +++ HQ+F+EPEG NT V Sbjct: 248 NEATHRIINANLDRSPLVTGDVVGVGPRYCPSIETKVMRFADKDHHQMFMEPEGRNTQEV 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+S+ LPE++Q RT+PG+E V +R YAIEYD I+P EL TLE+K+I GLF Sbjct: 308 YVQGMSSCLPEDVQIALYRTVPGMEHVAFMRSAYAIEYDCIHPTELKATLESKRIRGLFF 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGT+GYEEA AQG+VAGIN+A ++ + + R+ +YIGV+IDD+ ++ EPYR Sbjct: 368 AGQINGTSGYEEAGAQGIVAGINAALLLDRKEPMILDRSQAYIGVLIDDIINEDASEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL-VLT 484 M TSRAEYR+ LR DNAD RLTPIG ++G I E R +RF +Q+ + + + +T Sbjct: 428 MMTSRAEYRLLLRQDNADLRLTPIGHRVGLISEERYQRF---LQKKTAIADEVDRMGCVT 484 Query: 485 SKNLSSTSISFKQDGKTRTAY-----EFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 S + + G T + + P+ + N ++ P + V E ++I+ Sbjct: 485 VPPSESANAILSRLGTTVLKSGMPLGQLMKRPEINYANTAALDPQRPALPNNVCEEVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y +Q+ + ++ K E + IP+ Y + L E EKL+ ++P +L QAS+I Sbjct: 545 LKYEGYISKQIKQVEQFKKLESKRIPEGLHYHHIEGLRLEAAEKLNAVQPMSLGQASRIS 604 Query: 600 GMTPAALNLLLIYIKKN 616 G++PA + +L +Y++ + Sbjct: 605 GVSPADIAVLHVYLENH 621 >gi|157414281|ref|YP_001485147.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prochlorococcus marinus str. MIT 9215] gi|166989738|sp|A8G7I0|MNMG_PROM2 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|157388856|gb|ABV51561.1| Glucose inhibited division protein A [Prochlorococcus marinus str. MIT 9215] Length = 655 Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust. Identities = 275/629 (43%), Positives = 378/629 (60%), Gaps = 17/629 (2%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 N S+D+IVIGGGHAGCEAA AKLG STAL T I CNPA+GG K LV E+ Sbjct: 8 NESFDIIVIGGGHAGCEAAITTAKLGFSTALFTINLDRIAWQPCNPAVGGPAKSQLVHEV 67 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENL----- 117 DAL G++G++AD IQ R+LN +GPAV R Q D+ Y M + + +NL Sbjct: 68 DALGGIIGKLADETAIQKRILNASRGPAVWALRAQTDKREYSKRMIEILQNTDNLSLKEA 127 Query: 118 -----DVIQGEVAGFNTEKNI---ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKI 169 D+ + E G N++K + I + S +V++T GTFL G I IG + Sbjct: 128 MITELDIAKSEQVGLNSKKVVKKRIKGVKTFFGSYYSAKSVIITAGTFLEGKIWIGNKSM 187 Query: 170 PAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM 229 AGR G+ + L + + T RLKTGTPAR+D K+II+D+ + Q + FSF Sbjct: 188 SAGRSGEQAAQGLTQNLHEIGIKTERLKTGTPARVDKKSIIFDELDTQPSTAAGKYFSFD 247 Query: 230 TDKITNR-QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGER 288 D N Q+ C ITRT +TH++I +N+ + IY G I S GPRYCPSIEDKIV+F ++ Sbjct: 248 PDIKNNMPQVSCHITRTTSKTHQLIRDNLHLTPIYGGFIDSKGPRYCPSIEDKIVKFADK 307 Query: 289 NGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINP 348 HQIFLEPEG+NT +Y G ST LPE IQ + +RT+PGL K ++RP YA+EY+YI Sbjct: 308 KSHQIFLEPEGINTPEIYVQGFSTGLPENIQLELLRTLPGLSKCKMLRPAYAVEYEYIPA 367 Query: 349 KELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYI 408 +L +LETK+I LF AGQINGTTGYEEAAAQGLVAG+N+ RK NK D I F+R SYI Sbjct: 368 TQLQTSLETKEIEYLFSAGQINGTTGYEEAAAQGLVAGVNATRKLNKKDPIIFTRESSYI 427 Query: 409 GVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYI 468 G MI+DL +K + EPYR+ TSR+EYR++LR DNAD RLTP+G ++G I E+R + + + Sbjct: 428 GTMINDLITKDLKEPYRVLTSRSEYRLTLRGDNADRRLTPLGYQIGLIDEKRWSAYEEKM 487 Query: 469 QEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTR---TAYEFLSYPDFSIQNLFSICPDA 525 + + L + L + + S I K + T E L P+F +L Sbjct: 488 KLLEEEKLRLNNTRLKNTDEISKKIELDTGSKIKGSTTLKELLKRPNFHYLDLIKYNLAK 547 Query: 526 RKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 + + E ++I+ Y Y RQ ++I + + +P++ +Y + LS E +E L+ Sbjct: 548 KNLGYSIQEGVEIDIKYEGYLKRQKNNIEQINRQSCKSLPQEINYEKIDTLSLEARENLN 607 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYIK 614 +KP N ASKI G++ A L LL+++K Sbjct: 608 KIKPKNFGDASKIPGVSKADLTALLVWLK 636 >gi|302877169|ref|YP_003845802.1| glucose inhibited division protein A [Clostridium cellulovorans 743B] gi|307687868|ref|ZP_07630314.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium cellulovorans 743B] gi|302580026|gb|ADL54038.1| glucose inhibited division protein A [Clostridium cellulovorans 743B] Length = 628 Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust. Identities = 270/616 (43%), Positives = 382/616 (62%), Gaps = 9/616 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+V+G GHAG EAA AA++G +T L T ++G M CNP IGG KGHLVREIDAL Sbjct: 8 YDVVVVGAGHAGVEAALAAARMGMNTLLTTINLDSVGFMPCNPNIGGTAKGHLVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG D IQ R+LN KGPAV R QAD++ Y M+R + +NL++ Q EV Sbjct: 68 GGEMGVNIDKTFIQSRMLNTSKGPAVHSLRAQADKKRYSDEMKRVVEGTDNLNLRQIEVT 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + E + + ++ + + VVL TGT+L+ + IG + +G G P++ L S Sbjct: 128 AIDVEDGKVVGVQTRNGAYFKTKAVVLATGTYLKAKVIIGDVSYHSGPNGLQPADDLSQS 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + + R KTGTPAR+ K++ + K +Q DE++ PFSF D + QI C +T T Sbjct: 188 LLDIGVELRRFKTGTPARISSKSVDFSKMIEQPGDEKITPFSFQNDYLERDQISCWLTYT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N ET +I NI S +Y+G I GPRYCPSIEDKI+RF +++ HQ+F+EPEG NTD + Sbjct: 248 NEETQNVIKANIDRSPLYNGSIVGTGPRYCPSIEDKIMRFPDKDRHQVFIEPEGENTDEM 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+S++LPE++Q RT+PGLE V I+R YAIEYD INP +L +LE K I+GLF Sbjct: 308 YVGGMSSSLPEDVQIAMYRTVPGLENVEILRTAYAIEYDSINPLQLKLSLEFKNINGLFG 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ+NG++GYEEAA QGL+AGIN+ K + + R+D YIGV+IDDL +KG EPYR Sbjct: 368 AGQLNGSSGYEEAACQGLIAGINAVLKIRGEEPLILKRSDGYIGVLIDDLVTKGTNEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLR---SLLKSLV 482 M TSRAEYR+ LR DNAD RLT +G K+G + + +RF K++ N + +KSL Sbjct: 428 MMTSRAEYRLLLRQDNADLRLTELGRKVGLVSD---ERFEKFLSRKNAIEIELERIKSLQ 484 Query: 483 LTSK---NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 +T+K N SI K + YE + P+ + ++ D + V E++ I Sbjct: 485 ITNKTSVNEFLESIGSVALRKPISLYELIKRPELDYYKVEALDVDRSELLDSVKEQVNIA 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + Y Y +Q+ + ++ K E R IP+D +Y+ + L E +KL P N+ QAS+I Sbjct: 545 AKYEGYIEKQLEQVEQFKKFENRRIPEDINYNDIKGLRIEAIQKLQKTNPINIGQASRIS 604 Query: 600 GMTPAALNLLLIYIKK 615 G++PA +++LLIY+++ Sbjct: 605 GVSPADVSVLLIYMEQ 620 >gi|223038982|ref|ZP_03609274.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Campylobacter rectus RM3267] gi|222879955|gb|EEF15044.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Campylobacter rectus RM3267] Length = 621 Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust. Identities = 277/617 (44%), Positives = 370/617 (59%), Gaps = 7/617 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YD+IV+GGGHAG EA+ AA++G T LIT IG+ SCNPAIGGL KGHLV+EIDA Sbjct: 2 NYDIIVVGGGHAGIEASLAAARMGKKTLLITILAEQIGAASCNPAIGGLAKGHLVKEIDA 61 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG DA GIQFRVLN KGPAVRG R Q D + YR+ M+ +L+ NL++ Q Sbjct: 62 LGGQMGLTTDAVGIQFRVLNESKGPAVRGSRAQIDMDRYRVYMRNLLLNTPNLEISQEIA 121 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + I+ + + R S +++TTGTFL G+IH+G K+ AGR+G+ + +L + Sbjct: 122 TQILSRNGEITGVKTHLGNEYRTSKLIITTGTFLNGLIHVGFNKLEAGRVGELSAKNLSD 181 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S + GRLKTGT R+D K+I + E Q DE PFSF T Q+ C I Sbjct: 182 SLRDLGLEVGRLKTGTCPRVDAKSIDFSVLEIQGGDEEPSPFSFRTRDFAPTQLPCYIAY 241 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N + +++G I+ GPRYCPSIEDKI RFG+R+ H +F+EP+ L Sbjct: 242 TNETTHDIIRSNFDKAPLFTGQIEGVGPRYCPSIEDKINRFGDRDRHHLFVEPQTLEATE 301 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 Y NG ST+LP E+Q +R++ G E I+R GYAIEYDY+ P EL TLETKK GL+ Sbjct: 302 YYINGFSTSLPYEVQVAMLRSVRGFENARIVRHGYAIEYDYVQPTELKHTLETKKARGLY 361 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEA AQGL+AGIN+A + + R ++YIGV+IDDL +KG EPY Sbjct: 362 LAGQINGTTGYEEAGAQGLMAGINAALALDGKEPFVLRRDEAYIGVLIDDLVTKGTKEPY 421 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL----KS 480 RMFTSRAEYR+ LR DNA RL G +LG + E ++ N R L Sbjct: 422 RMFTSRAEYRLLLREDNAVLRLGGYGRELGLLDEATFEKIEAI--RSNLTRGLELLNGTE 479 Query: 481 LVLTSKNLS-STSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + T +NL S+ + + T + ++ F+ + L + P +E++ E Sbjct: 480 ITPTKRNLELLDSLDEEIISQNLTLQKIVARKSFTGEKLRKLDPFFEALDEASLEQILTE 539 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + Y Y Q + +K IP+ F++ + LSNE+ EKL P L AS+I Sbjct: 540 AKYQHYIAEQKKQIDRMKDMMSVKIPEGFNFRGISGLSNEVVEKLERFAPPTLFAASEIS 599 Query: 600 GMTPAALNLLLIYIKKN 616 G+TPAA+++L IYIK N Sbjct: 600 GVTPAAIDILHIYIKMN 616 >gi|313112542|ref|ZP_07798207.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Faecalibacterium cf. prausnitzii KLE1255] gi|310625142|gb|EFQ08432.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Faecalibacterium cf. prausnitzii KLE1255] Length = 634 Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust. Identities = 275/615 (44%), Positives = 375/615 (60%), Gaps = 10/615 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAG EAA AA LGA TA+ T IG+M CNP+IGG KG LVRE+DAL Sbjct: 18 YDVIVIGAGHAGIEAAHAAATLGARTAVFTMSLDAIGNMPCNPSIGGTAKGTLVRELDAL 77 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+MG ADA +Q R+LN KGPAV R Q DR+ Y M+ + L + Q EV Sbjct: 78 GGVMGLAADATYLQSRMLNKGKGPAVHALRVQTDRKRYHEYMKHALELTPGLAIHQAEVV 137 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 TE + +V Q N VV+ TGT L G I +G +G G +N+L +S Sbjct: 138 SIETENGRVKGVVTQLNGEYSAKCVVIATGTNLGGKIFVGDAWYASGPDGMHAANALTDS 197 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFAD--ERLIPFSFMTDKITNRQIECGIT 243 R KTGTPAR+ ++I + K E Q D L PFSFMTD + ++EC I Sbjct: 198 LKAAGLPLRRFKTGTPARVHRRSIDFSKLECQPGDPDNELQPFSFMTDAPMHNKVECWIA 257 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN ETHRII++NI+ S +Y G I+ GPRYCPSIEDK+VRF ++ H IF+EP G NT+ Sbjct: 258 YTNPETHRIILDNIRRSPLYGGMIEGVGPRYCPSIEDKVVRFAGKDRHPIFVEPCGENTE 317 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G S++LPE++Q+ F R+I G E + I+RP YAIEYD ++P L TLE+K + GL Sbjct: 318 EMYLQGASSSLPEDVQNAFYRSIKGFENIEIMRPAYAIEYDCVDPTSLEATLESKVVRGL 377 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQ NGT+GYEEAAAQGL+AG+N+AR + + + R SY+G ++DDL +KGV++P Sbjct: 378 YGAGQFNGTSGYEEAAAQGLLAGLNAARNALGKEQLILPRHTSYLGTLVDDLVTKGVMDP 437 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFL---RSLLKS 480 YRM TSR+EYR++LR DNAD RLTPIG + G + + R+AKY + L R L+ Sbjct: 438 YRMMTSRSEYRLTLRQDNADQRLTPIGREYGLV---QDDRWAKYQHTQSILEAERRRLRE 494 Query: 481 LVLTSKNLSST--SISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 L + +L + + + A E L P+ S L + + + ++ ERL+ Sbjct: 495 THLRTADLRTAMEAAGLAPAAEGGIAEELLRRPEISYPLLAGVIGWGEQITPMLAERLET 554 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E YA Y RQ +++ EK LIP DF+Y+ L L+ E +EKL+ ++P NL QA +I Sbjct: 555 EIKYAGYIARQDRMIRDVARHEKTLIPDDFEYADLAGLTLEAREKLARIRPKNLGQAGRI 614 Query: 599 EGMTPAALNLLLIYI 613 G++P+ + L I + Sbjct: 615 PGVSPSDVAQLSIAL 629 >gi|171909507|ref|ZP_02924977.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Verrucomicrobium spinosum DSM 4136] Length = 626 Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust. Identities = 274/635 (43%), Positives = 380/635 (59%), Gaps = 40/635 (6%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIV G GHAG EAA AA+LG TA++T TI MSCNPAIGGL KGHLVREID Sbjct: 8 KVYDVIVCGAGHAGVEAAMAAARLGCETAILTQNLDTITQMSCNPAIGGLAKGHLVREID 67 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G+MG DA GIQFR+LN KGP+V+ PR Q D++ Y+ M+ + +Q +LD+ QG Sbjct: 68 ALGGVMGSNTDATGIQFRMLNATKGPSVQAPRAQCDKKAYQFRMKWLVENQPHLDLHQGN 127 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 A E + ++ + + R ++V+++GTF+RG++H+G GRMGD S +L Sbjct: 128 AAEILVENDQVTGVRTSLGLIYRAKSIVISSGTFMRGLLHVGLQNQAGGRMGDGLS-TLS 186 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-------- 235 +S F+ R KTGTP R++G++I + + E Q D FS+++ + + Sbjct: 187 DSLRHLGFEVQRFKTGTPCRINGRSIDYSQCELQPGDTPPPRFSYLSGVLPDDSELFTLN 246 Query: 236 ---------RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFG 286 Q C IT TN TH +I N+ S +Y G I+ GPRYCPSIEDK+VRF Sbjct: 247 KWSPELFHVEQSPCWITYTNPRTHEVIRANLDKSPMYCGVIEGIGPRYCPSIEDKVVRFA 306 Query: 287 ERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI 346 E+ HQIFLEPEG +T Y NG+ST+LP E+Q++FIR+I GLE IIRPGYA+EYDY Sbjct: 307 EKERHQIFLEPEGRHTREYYVNGVSTSLPFEVQYEFIRSIKGLENAEIIRPGYAVEYDYC 366 Query: 347 NPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDS 406 P +L TLETK++SGL+ AGQINGT+GYEEAA QGL AG N+A K R+++ Sbjct: 367 PPTQLQSTLETKRVSGLYFAGQINGTSGYEEAAGQGLWAGTNAALKVKGEAPFTLKRSEA 426 Query: 407 YIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAK 466 Y+ VM+DDL +KG EPYR+FTSRAEYR+ LR DNAD RLTP + G + R+ A Sbjct: 427 YMAVMVDDLITKGTTEPYRLFTSRAEYRLLLRQDNADLRLTPKAAERGMVDAFRKAHTAS 486 Query: 467 YIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICP-DA 525 I++ L+ + S + L+ +++ P +N F+ P D Sbjct: 487 KIEQLAELKKFVASTTFENTRLA----------------QWIKRP----ENAFARLPSDL 526 Query: 526 R-KFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKL 584 R +SS + + + YA Y RQ + E ++IP DYS++ L E KL Sbjct: 527 RGTWSSELWTVAENDLKYAGYITRQEDMVDKTSRMEDKIIPDWVDYSAMKGLKKEAMLKL 586 Query: 585 SILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 ++P QA++I+G+TPA L ++ + +KK V+ Sbjct: 587 QSIRPTTFGQAARIQGVTPADLAVVSVVLKKGGVE 621 >gi|298491295|ref|YP_003721472.1| glucose inhibited division protein A ['Nostoc azollae' 0708] gi|298233213|gb|ADI64349.1| glucose inhibited division protein A ['Nostoc azollae' 0708] Length = 646 Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust. Identities = 274/633 (43%), Positives = 374/633 (59%), Gaps = 30/633 (4%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GH+GCEAA A+LG T L+T I CNPA+GG K L E+DA Sbjct: 12 AYDVIVVGAGHSGCEAALATARLGCRTLLLTLNLDKIAWQPCNPAVGGPAKSQLTHEVDA 71 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G +G++AD +Q R+LN +GPAV R Q D+ Y M+ + +QENL + +G V Sbjct: 72 LGGEIGKMADRTYLQKRILNSSRGPAVWALRAQTDKRKYAAVMKGIVENQENLTIREGMV 131 Query: 125 A----GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 G N E II + C V+LTTGTFL G I +G + AGR G+ + Sbjct: 132 TDLVLGANDE--IIIGVETYFGVAFECKAVILTTGTFLGGKIWVGNKSMEAGRAGEFAAL 189 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIE 239 L + + F+TGRLKTGTPAR+D +++ + K E Q DE + FSF + R QI Sbjct: 190 GLTETLNRLGFETGRLKTGTPARVDKRSVNYSKMEIQPGDEEVRWFSFDPQEWVEREQIP 249 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +TRT ETHR+I EN+ S +Y G +++ GPRYCPSIEDKIVRF + HQIF+EPEG Sbjct: 250 CHMTRTTKETHRLIQENLHLSPVYGGWVEAKGPRYCPSIEDKIVRFADTESHQIFIEPEG 309 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 N +Y G ST LPE +Q +R++PGLE ++RP YA+EYDY+ + +PTL TKK Sbjct: 310 RNIPELYIQGFSTGLPENLQLLMLRSLPGLENCLMLRPAYAVEYDYLPGTQCYPTLMTKK 369 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 + GLF AGQINGTTGYEEAAAQGLVAGIN+AR + I F R SYIG ++DDL +K Sbjct: 370 VEGLFCAGQINGTTGYEEAAAQGLVAGINAARFVRGEEIIIFPREQSYIGTLVDDLCTKD 429 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 + EPYRM TSR+EYR+ LR DNAD R+TP+G ++G I +RR ++ S K Sbjct: 430 LREPYRMLTSRSEYRLLLRSDNADQRMTPLGREIGLIDDRR----------WDLFTSKQK 479 Query: 480 SLVLTSKNLSSTSISFKQD------GKTRTAY-------EFLSYPDFSIQNLFSICPDAR 526 +V + L ST I ++ T+ A + L P +L Sbjct: 480 QIVAEKERLYSTRIKEHEEVGRAIAQNTQQAIKGSISLADLLRRPGIHYIDLERYALGNT 539 Query: 527 KFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSI 586 + E +I+ Y+ Y RQ + ++I + R +P D DY+++ LS E +EKL+ Sbjct: 540 SLNQAEKEGAEIDIKYSGYLARQQNQIEQIARQVNRSLPVDLDYAAIDTLSKEAREKLNK 599 Query: 587 LKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 +KP + QA++I G+ PA +N LLIY++ K Sbjct: 600 VKPLTIGQAARIGGVNPADINALLIYLEIRKTK 632 >gi|15644841|ref|NP_207011.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Helicobacter pylori 26695] gi|2494734|sp|P56138|MNMG_HELPY RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|2313303|gb|AAD07281.1| glucose inhibited division protein (gidA) [Helicobacter pylori 26695] Length = 621 Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust. Identities = 281/627 (44%), Positives = 375/627 (59%), Gaps = 16/627 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M+ S D++V+GGGHAG EA+ +AAK+GA LIT TIG SCNPAIGGLGKGHL + Sbjct: 1 MVKES-DILVVGGGHAGIEASLIAAKMGARVHLITMLIDTIGLASCNPAIGGLGKGHLTK 59 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+D L G MG + D +G+Q+RVLN KGPAVRG R Q D + YR+ + +L+ NL V Sbjct: 60 EVDVLGGAMGIITDHSGLQYRVLNASKGPAVRGTRAQIDMDTYRILARNLVLNTPNLSVS 119 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q E + + + N+ R V++TTGTFL+GV+HIG+ + GR G++ SN Sbjct: 120 QEMTESLILENDEVVGVTTNINNTYRAKKVIITTGTFLKGVVHIGEHQNQNGRFGENASN 179 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 SL + + F RLKTGT R+ G +I ++ E+ F D FS+ T Q+ C Sbjct: 180 SLALNLRELGFKVDRLKTGTCPRVAGNSIDFEGLEEHFGDTNPPYFSYKTKDFNPTQLSC 239 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN TH+II +N + ++SG I+ GPRYCPSIEDKI RF E+ HQ+FLEP+ + Sbjct: 240 FITYTNPITHQIIRDNFHRAPLFSGQIEGIGPRYCPSIEDKINRFSEKERHQLFLEPQTI 299 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + Y NG+ST+LP ++Q + I +I GLE I R GYAIEYD+I P EL TLETKKI Sbjct: 300 HKSEYYINGLSTSLPLDVQEKVIHSIKGLENALITRYGYAIEYDFIQPTELTHTLETKKI 359 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GL+LAGQINGTTGYEEAAAQGL+AGIN+ R ++YIGV+IDDL +KG Sbjct: 360 KGLYLAGQINGTTGYEEAAAQGLMAGINAVLALKNQAPFILKRNEAYIGVLIDDLITKGT 419 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DN RL +LG + E K K QE LK Sbjct: 420 NEPYRMFTSRAEYRLLLREDNTLFRLGEHAYRLGLMEEDFYKELKKDKQEIQDNLKRLKE 479 Query: 481 LVLTSK--------NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV 532 +LT L I+ K DG + L+ F+ + + S + V Sbjct: 480 YILTPSKEVLKRLDELDENPINDKVDGVS-----LLARDSFNAEKMRSFFSFLAPLNERV 534 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 +E+++IE Y Y +Q ++ K IPK F + +P LS E EKL +P +L Sbjct: 535 LEQIKIECKYNIYIEKQHENIAKMDSMLKVSIPKGFVFKGIPGLSLEAVEKLEKFRPKSL 594 Query: 593 LQASKIEGMTPAALNLLLIYI--KKNT 617 +AS+I G+TPA L++L +YI +KN+ Sbjct: 595 FEASEISGITPANLDVLHLYIHLRKNS 621 >gi|318040758|ref|ZP_07972714.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Synechococcus sp. CB0101] Length = 643 Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust. Identities = 266/619 (42%), Positives = 374/619 (60%), Gaps = 11/619 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAGCEAA AA+LG STAL + I CNPA+GG K LV E+DAL Sbjct: 11 FDVIVVGGGHAGCEAAITAARLGCSTALFSLNLDRIAWQPCNPAVGGPAKSQLVHEVDAL 70 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G++GR+ADA +Q R+LN +GPAV R Q D+ Y M + + NL + + V Sbjct: 71 GGVIGRLADATALQKRILNASRGPAVWALRAQTDKRQYARQMLQLLQHTPNLALREAMVT 130 Query: 126 GFNTEKNI-----ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 G E I+ + S VVLT GTFL G I +G + AGR G+ + Sbjct: 131 GLEVEGTPGEDARITGVRTYFGSTYSAGAVVLTAGTFLGGQIWVGNQSMSAGRAGEQAAE 190 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSF-MTDKITNRQIE 239 L + F GRLKTGTPAR+D ++I D+ E+Q +D FSF ++ + Sbjct: 191 GLTEALEALGFQMGRLKTGTPARVDRRSIALDQLEEQPSDAHERYFSFDPASWVSGEPMS 250 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C ITRT TH++I +N+ + IY G I S GPRYCPSIEDKIVRF ++ HQIFLEPEG Sbjct: 251 CHITRTTAATHQLIRDNLHLTPIYGGFIDSKGPRYCPSIEDKIVRFVDKESHQIFLEPEG 310 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 +T +Y G ST LPE +Q + +RT+PGLE+ ++RP YA++YDY+ +L P+LETK+ Sbjct: 311 RDTPEIYVQGFSTGLPERLQLELLRTLPGLEQCVMLRPAYAVDYDYLPATQLKPSLETKR 370 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 + GL+ AGQ+NGTTGYEEAAAQGLVAG+N+ R+ F R SYIG MIDDL +K Sbjct: 371 VQGLYSAGQLNGTTGYEEAAAQGLVAGLNAVRQLRGETPTHFPREGSYIGTMIDDLITKD 430 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 + EPYR+ TSR+EYR+ LR DNAD RLTP+G +LG I +RR + + + L+ Sbjct: 431 LREPYRVLTSRSEYRLVLRGDNADRRLTPLGRELGLIDDRRWETYTRKQDAIAAETQRLE 490 Query: 480 SLVLTSKNLSSTSISFKQDGK----TRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIER 535 ++ L + ++T++ +Q G + T + L P F +L V E Sbjct: 491 TVRLKVSDPAATAV-VEQTGAAIKGSITLADLLRRPGFRSDDLVRHGLADADLPLDVREG 549 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 +I+ Y+ Y RQ + ++K +E + IP DY+S+ LS E +EKL+ ++P NL QA Sbjct: 550 AEIDIKYSGYLARQQQQIDQVKKQEHKAIPDGIDYASISTLSREAREKLAAVQPLNLGQA 609 Query: 596 SKIEGMTPAALNLLLIYIK 614 S++ G++PA + L+++++ Sbjct: 610 SRVPGVSPADVTALMLWLE 628 >gi|183398093|gb|ACC62507.1| mitochondrial translation optimization 1 homolog isoform b (predicted) [Rhinolophus ferrumequinum] Length = 692 Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust. Identities = 292/644 (45%), Positives = 409/644 (63%), Gaps = 32/644 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DV+VIGGGHAG EAAA AA+ G+ T L+TH+ TIG MSCNP+ GG+GKGHL+RE+DAL Sbjct: 37 FDVVVIGGGHAGTEAAAAAARCGSRTLLLTHRVDTIGQMSCNPSFGGIGKGHLMREVDAL 96 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGL R+ D +G+ ++VLN +KGPAV G R Q DR+LY+ MQ+EIL+ L V +G V Sbjct: 97 DGLCSRICDQSGVHYKVLNRRKGPAVWGLRAQIDRKLYKQNMQKEILTTPLLTVQEGAVE 156 Query: 126 GF--------NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 +T K S +V+ D S + +V+LT GTFLRG+I IG PAGR+GD Sbjct: 157 DLILTEPEPEHTGKCRASGVVLADGSKVYADSVILTAGTFLRGMIVIGLEMHPAGRLGDQ 216 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR- 236 PS L + K F GRLKTGTP R+ ++I + +Q D IPFSF+ + + + Sbjct: 217 PSVGLAQTLEKLGFVVGRLKTGTPPRIAKESINFSILNQQTPDNPSIPFSFLNETVWIKP 276 Query: 237 --QIECGITRTNLETHRIIMENIKHSAIYSGDIK--SYGPRYCPSIEDKIVRFGERNGHQ 292 Q+ C +T TN I++EN+ + IK + GPRYCPSIE K++RF R HQ Sbjct: 277 EDQLPCYLTHTNPRVDEIVLENLH----LNSHIKETTRGPRYCPSIESKVLRFPNRL-HQ 331 Query: 293 IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF 352 ++LEPEG+++D++YP G+S LP E+Q + I I GLEK +I PGY ++YDY +P+++ Sbjct: 332 VWLEPEGMDSDLIYPQGLSVTLPAELQEKMITCIRGLEKAKMIHPGYGVQYDYFDPRQIA 391 Query: 353 PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMI 412 P+LET + LF AGQINGTTGYEEAAAQG++AGIN++ + SRT+ YIGV+I Sbjct: 392 PSLETHLVQRLFFAGQINGTTGYEEAAAQGVIAGINASLRVRHKPPFVISRTEGYIGVLI 451 Query: 413 DDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMK-LGCIGERRQKRFAKYIQEY 471 DDLT+ G EPYRMFTSRAE+R+SLRPDNAD+RLT G K GC+ ++R +R + Sbjct: 452 DDLTTMGTNEPYRMFTSRAEFRLSLRPDNADSRLTFRGYKEAGCVSQQRYERASWMKSSL 511 Query: 472 NFLRSLLKSLVLTS----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA-R 526 S+LKS+ +S K + SIS + R A + L Y + ++ L P+ Sbjct: 512 EEGISVLKSIEFSSSKWKKLIPEASISMGKSLPLR-ALDVLKYEEVDMELLAKAVPEPLE 570 Query: 527 KFSSL--VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLP--ALSNELKE 582 K++ + ERL+IE++Y + Q E K ++ +E +PKD DY +L +LS E++E Sbjct: 571 KYTKCRELAERLKIEAAYESVLFHQQQEIKSVQRDEALQLPKDLDYLTLKDVSLSCEVRE 630 Query: 583 KLSILKPFNLLQASKIEGMTPAALNLLLIYIK---KNTVKLNEI 623 KL +P + AS+I G+TPAA+ LL ++K + LNE+ Sbjct: 631 KLHFCRPQTIGAASRIPGVTPAAIINLLRFVKTTQQRQAALNEL 674 >gi|153939143|ref|YP_001392998.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium botulinum F str. Langeland] gi|166222927|sp|A7GJN8|MNMG_CLOBL RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|152935039|gb|ABS40537.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium botulinum F str. Langeland] gi|295320973|gb|ADG01351.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium botulinum F str. 230613] Length = 625 Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust. Identities = 270/619 (43%), Positives = 390/619 (63%), Gaps = 15/619 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DV+VIG GHAGCEAA +A++G T + T +I M+CNP IGG KGHLVREIDAL Sbjct: 8 FDVVVIGAGHAGCEAALASARMGCKTLICTMNLDSIALMACNPNIGGTAKGHLVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG D IQ R+LN KGPAV R QAD++ Y M+ + ++N+ + Q EV Sbjct: 68 GGEMGINIDHTFIQSRMLNTSKGPAVHSLRAQADKKRYSERMKHLLEKEDNVVLRQLEVI 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + E N + ++ ++ + ++L TGT+L+G I IG + +G G P+N L S Sbjct: 128 EIDVEDNEVKGVLTKNGAYFTTKAIILCTGTYLKGKIIIGDIIYSSGPSGLYPANDLSQS 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + + R KTGTPAR++ +++ + K +Q DE+++PFSF+ +K+ QI C +T T Sbjct: 188 LLDLGINLRRFKTGTPARINKRSVDFSKMIEQPGDEKIVPFSFIHNKLDKDQISCYLTYT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 + ETH+II +NI S +Y+G I+ GPRYCPSIEDKIVRF +++ HQIF+EPEG NT+ + Sbjct: 248 SEETHKIIHQNIHRSPLYNGSIEGVGPRYCPSIEDKIVRFPDKDKHQIFIEPEGENTEEL 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+S++LPE++Q + R++PGLE I+R YAIEYD I+P++L TLE K I+GL+ Sbjct: 308 YVGGMSSSLPEDVQIKMYRSVPGLENAEILRTAYAIEYDCIDPQQLDLTLEFKNINGLYG 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ NG++GYEEAAAQGL+AGIN+ K + + + R+D+YIGV+IDDL +KG EPYR Sbjct: 368 AGQFNGSSGYEEAAAQGLIAGINAVLKIKEKNPLILKRSDAYIGVLIDDLVTKGTNEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 M TSRAEYR+ LR DNAD RLT +G K+G + E R +F + L+++ +T Sbjct: 428 MMTSRAEYRLLLRQDNADLRLTELGYKVGLVKEDRYNKFLNRKKNVENEIERLRNMQITG 487 Query: 486 KN------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV---IERL 536 K L S K K + YE + P+ + F + P K SL E + Sbjct: 488 KREINEFLLEKGSTELK---KPISLYELIKRPEL---DYFKVEPLDDKRPSLSDDEKEEI 541 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 I + Y Y +Q+ + ++ K E RLIPK +Y + L E +KL +KP N+ QAS Sbjct: 542 NIIAKYEGYINKQLEQVEQFKKYEDRLIPKSINYLDIKGLRLEAIQKLEKIKPINIGQAS 601 Query: 597 KIEGMTPAALNLLLIYIKK 615 +I G++PA +++LLIY+++ Sbjct: 602 RISGVSPADISVLLIYMER 620 >gi|225386361|ref|ZP_03756125.1| hypothetical protein CLOSTASPAR_00105 [Clostridium asparagiforme DSM 15981] gi|225047543|gb|EEG57789.1| hypothetical protein CLOSTASPAR_00105 [Clostridium asparagiforme DSM 15981] Length = 632 Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust. Identities = 268/621 (43%), Positives = 380/621 (61%), Gaps = 9/621 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +YD++V+G GHAGCEAA A+LG T + T +I M CNP +GG KGHLVRE Sbjct: 4 LEETYDIVVVGAGHAGCEAALACARLGMETIMFTVSVDSIALMPCNPNVGGSSKGHLVRE 63 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DAL G MG+ D IQ ++LN KGPAV R QAD++ Y M+R + + E+L V Q Sbjct: 64 LDALGGEMGKNIDKTFIQSKMLNESKGPAVHSLRAQADKQEYSRQMRRTLENTEHLTVRQ 123 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 EV+ E +I + ++ R VVL TGT+LR G + P G G +N Sbjct: 124 AEVSELVVEDGVIKGVKTFSGAVYRAKAVVLCTGTYLRARCIYGDVSNPTGPNGLQAANH 183 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KITNRQIE 239 L S + R KTGTPAR+D ++I + + E+QF D+R++PFSF TD + Q+ Sbjct: 184 LTESLRANGIEMFRFKTGTPARVDKRSIDFSRMEEQFGDQRVVPFSFSTDPESVQKDQVS 243 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +T TN ETHRII EN+ S ++SG I+ GPRYCPSIEDK+V+F ++ HQ+F+EPEG Sbjct: 244 CWLTYTNEETHRIIRENLDRSPLFSGAIEGTGPRYCPSIEDKVVKFPDKGRHQVFVEPEG 303 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T+ +Y G+S++LPE++Q+ RT+ GLEKV I+R YAIEYD IN +L TLE KK Sbjct: 304 LYTNEMYLGGMSSSLPEDVQYAMYRTVAGLEKVKIVRNAYAIEYDCINSLQLKATLEFKK 363 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF GQ NG++GYEEAA QG +AG+N+A K + I R+ +YIGV+IDDL +K Sbjct: 364 IGGLFSGGQFNGSSGYEEAAVQGFMAGVNAAMKIMGKEQIVLDRSQAYIGVLIDDLVTKE 423 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKR-FAKYIQEYNFLRSLL 478 EPYRM TSRAEYR+ LR DNAD RL IG ++G + + +R AK Q +R L Sbjct: 424 NHEPYRMMTSRAEYRLLLRQDNADLRLRGIGHEIGLVSDEEYERMLAKRRQIEEEIRRLG 483 Query: 479 KSLV----LTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIE 534 K + L L + + + G T E + P+ + L + PD + V E Sbjct: 484 KVNIGAGDLVQNFLEEHNSTLLKSGITLA--ELVKRPELNYGVLACLDPDRPELPEDVQE 541 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 ++ IE Y Y RQM + + K E R +P+ F+Y + +L E +KL+ ++P + Q Sbjct: 542 QVNIEIKYEGYIKRQMQQVAQFKKLEGRKLPEAFEYGQVKSLRREAVQKLNQVQPATVGQ 601 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G++PA +++LL+++++ Sbjct: 602 ASRISGVSPADISVLLVHLEQ 622 >gi|317012057|gb|ADU82665.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Helicobacter pylori Lithuania75] Length = 621 Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust. Identities = 281/627 (44%), Positives = 375/627 (59%), Gaps = 16/627 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M+ S D++V+GGGHAG EA+ +AAK+GA LIT TIG SCNPAIGGLGKGHL + Sbjct: 1 MVKES-DILVVGGGHAGIEASLIAAKMGARVHLITMLIDTIGLASCNPAIGGLGKGHLTK 59 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+D L G MG + D +G+Q+RVLN KGPAVRG R Q D + YR+ + +L+ NL V Sbjct: 60 EVDVLGGAMGIITDHSGLQYRVLNASKGPAVRGTRAQIDMDTYRIFARNLVLNTPNLSVS 119 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q E + + + N+ + V++TTGTFL+GV+HIG+ + GR G++ SN Sbjct: 120 QEMTESLILENDEVVGVTTNINNTYKAKKVIITTGTFLKGVVHIGEHQNQNGRFGENASN 179 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 SL + + F RLKTGT R+ G +I ++ E+ F D FS+ T Q+ C Sbjct: 180 SLALNLRELGFKVERLKTGTCPRVAGNSIDFEGLEEHFGDTNPPYFSYKTKDFNPTQLSC 239 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN TH+II +N + ++SG I+ GPRYCPSIEDKI RF E+ HQ+FLEP+ + Sbjct: 240 FITYTNPITHQIIRDNFHRAPLFSGQIEGIGPRYCPSIEDKINRFSEKERHQLFLEPQTI 299 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + Y NG+ST+LP ++Q + I +I GLE I R GYAIEYD+I P EL TLETKKI Sbjct: 300 HKSEYYINGLSTSLPLDVQEKVIHSIKGLENALITRYGYAIEYDFIQPTELTHTLETKKI 359 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GL+LAGQINGTTGYEEAAAQGL+AGIN+ R ++YIGV+IDDL +KG Sbjct: 360 KGLYLAGQINGTTGYEEAAAQGLIAGINAVLALKNQAPFILKRNEAYIGVLIDDLVTKGT 419 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DN RL +LG + E K K Q LK Sbjct: 420 NEPYRMFTSRAEYRLLLREDNTLFRLGEHAYRLGLMEEDFYKELKKDQQAIQENLKRLKE 479 Query: 481 LVLTS--------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV 532 VLT L I+ K DG + L+ F+I+ + S + V Sbjct: 480 CVLTPSKEALKRLSELGENPINDKMDGVS-----LLARDSFNIEKMRSFFSFLAPLNERV 534 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 +E+++IE Y Y +Q ++ K IPK F + +P LS E EKL +P +L Sbjct: 535 LEQIKIECKYNIYIEKQHENIAKMDSMLKVSIPKGFVFKGIPGLSLEAVEKLEKFRPKSL 594 Query: 593 LQASKIEGMTPAALNLLLIYI--KKNT 617 +AS+I G+TPA L++L +YI +KN+ Sbjct: 595 FEASEISGITPANLDVLHLYIHLRKNS 621 >gi|291541856|emb|CBL14966.1| glucose-inhibited division protein A [Ruminococcus bromii L2-63] Length = 624 Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust. Identities = 266/618 (43%), Positives = 389/618 (62%), Gaps = 10/618 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV V+G GHAG EAA AA+LG TA+ T +G+ CNP+IGG KGHLVREIDAL Sbjct: 8 YDVAVVGAGHAGIEAALAAARLGCKTAIFTINMDAVGNCPCNPSIGGTAKGHLVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ AD +Q R+LN KGPAV R Q DR Y M+ +I Q NLD+ Q E+ Sbjct: 68 GGEMGKTADECFLQSRMLNRGKGPAVHSLRAQIDRRKYSSVMKHKIELQNNLDLRQAEIT 127 Query: 126 GFNTEK---NIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 + N+ + ++ ++ +C TV++ TGT+L G I +G++ +G G P+ L Sbjct: 128 DIEKTEDGYNLTTRML----AVFKCKTVIIATGTYLGGRIFVGEVSYESGPDGIFPAAFL 183 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGI 242 +S K R KTGTPAR+ +I + + E Q DE PFS+ T+ + ++EC + Sbjct: 184 GSSLKKLGLPLRRFKTGTPARVLKSSIDFSELEVQKGDEPPQPFSYETENLGENKVECHV 243 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 + TN ET +II+ENI S +Y+G I+ GPRYCPS EDKI+RF ++ HQ+F+EP GL+T Sbjct: 244 SWTNDETKQIILENINRSPLYAGKIEGVGPRYCPSFEDKIMRFKDKPRHQLFIEPCGLDT 303 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + +Y G+S++LPEE+Q +F TI GLE I+RP YAIEYD ++P + PTLE K G Sbjct: 304 EEMYLQGMSSSLPEEVQLKFYHTIKGLEHCLIMRPAYAIEYDCVDPLAMNPTLEFKDFEG 363 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQ NG++GYEEAAAQGLVAGIN+A K + + F R++SYIG ++DDL +KG E Sbjct: 364 LFGAGQFNGSSGYEEAAAQGLVAGINAAMKVLGREPVIFDRSESYIGTLVDDLVTKGANE 423 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRM TSR+EYR+ LR DNAD RLTP+G ++G I + R +F K + + LKS V Sbjct: 424 PYRMMTSRSEYRLVLRQDNADERLTPLGHRIGLISDERYAKFLKKQELKKEELNRLKSTV 483 Query: 483 LTSKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 ++ + ++ + ++ + + + + P L +I + + E+++IE Sbjct: 484 ISPTDEANEILVSRETSEITSGVRLIDLMKRPQLGYDALKNIDKTRPELDPNIFEQVEIE 543 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y +Q+ + +++K E + +PKDFDY+ + L E +EKL+ +KP N+ QAS+I Sbjct: 544 IKYEGYIQKQLKQVEQMKKLEVKQLPKDFDYNEIEGLRLEAREKLNKIKPLNIGQASRIS 603 Query: 600 GMTPAALNLLLIYIKKNT 617 G++PA +++LLI++ +N Sbjct: 604 GVSPADISVLLIWLAQNN 621 >gi|254526346|ref|ZP_05138398.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prochlorococcus marinus str. MIT 9202] gi|221537770|gb|EEE40223.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prochlorococcus marinus str. MIT 9202] Length = 655 Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust. Identities = 275/629 (43%), Positives = 378/629 (60%), Gaps = 17/629 (2%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 N S+D+IVIGGGHAGCEAA AKLG STAL T I CNPA+GG K LV E+ Sbjct: 8 NESFDIIVIGGGHAGCEAAITTAKLGFSTALFTINLDRIAWQPCNPAVGGPAKSQLVHEV 67 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENL----- 117 DAL G++G++AD IQ R+LN +GPAV R Q D+ Y M + + +NL Sbjct: 68 DALGGIIGKLADETAIQKRILNASRGPAVWALRAQTDKREYSKRMIEILQNTDNLSLKEA 127 Query: 118 -----DVIQGEVAGFNTEKNI---ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKI 169 D+ + E G N++K + I + S +V++T GTFL G I IG + Sbjct: 128 MITELDIAKTEQVGLNSKKVVKKRIKGVKTFFGSYYTAKSVIITAGTFLEGKIWIGNKSM 187 Query: 170 PAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM 229 AGR G+ + L + + T RLKTGTPAR+D K+II+D+ + Q + FSF Sbjct: 188 SAGRSGEQAAQGLTQNLHEIGIKTERLKTGTPARVDKKSIIFDELDTQPSTAADKYFSFD 247 Query: 230 TDKITNR-QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGER 288 D N Q+ C ITRT +TH++I +N+ + IY G I S GPRYCPSIEDKIV+F ++ Sbjct: 248 PDIKNNMPQVSCHITRTTSKTHQLIRDNLHLTPIYGGFIDSKGPRYCPSIEDKIVKFADK 307 Query: 289 NGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINP 348 HQIFLEPEG+NT +Y G ST LPE IQ + +RT+PGL K ++RP YA+EY+YI Sbjct: 308 ESHQIFLEPEGINTPEIYVQGFSTGLPENIQLELLRTLPGLSKCKMLRPAYAVEYEYIPA 367 Query: 349 KELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYI 408 +L +LETK+I LF AGQINGTTGYEEAAAQGLVAG+N+ RK NK D I F+R SYI Sbjct: 368 TQLQTSLETKEIEYLFSAGQINGTTGYEEAAAQGLVAGVNATRKLNKKDPIIFTRESSYI 427 Query: 409 GVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYI 468 G MI+DL +K + EPYR+ TSR+EYR++LR DNAD RLTP+G ++G I E+R + + + Sbjct: 428 GTMINDLITKDLKEPYRVLTSRSEYRLTLRGDNADRRLTPLGYQIGLIDEKRWSAYEEKM 487 Query: 469 QEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTR---TAYEFLSYPDFSIQNLFSICPDA 525 + + L + L + + S I K + T E L P+F +L Sbjct: 488 KLLEEEKLRLNNTRLKNTDEISKKIELDTGSKIKGSTTLKELLKRPNFHYLDLIKYNLAK 547 Query: 526 RKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 + + E ++I+ Y Y RQ ++I + + +P++ +Y + LS E +E L+ Sbjct: 548 KNLGYSIQEGVEIDIKYEGYLKRQKNNIEQINRQSCKSLPQEINYEKIDTLSLEARENLN 607 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYIK 614 +KP N ASKI G++ A L LL+++K Sbjct: 608 KIKPKNFGDASKIPGVSKADLTALLVWLK 636 >gi|153815416|ref|ZP_01968084.1| hypothetical protein RUMTOR_01651 [Ruminococcus torques ATCC 27756] gi|145847275|gb|EDK24193.1| hypothetical protein RUMTOR_01651 [Ruminococcus torques ATCC 27756] Length = 636 Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust. Identities = 268/622 (43%), Positives = 382/622 (61%), Gaps = 17/622 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+ V+G GHAGCEAA A+LG T + T +I M CNP IGG KGHLV+EIDAL Sbjct: 15 YDIAVVGAGHAGCEAALACARLGFKTVMFTVSVDSIALMPCNPNIGGSSKGHLVKEIDAL 74 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV- 124 G MG+V D IQ ++LN KGPAV R QAD+ Y M+R + Q+NLD+ Q EV Sbjct: 75 GGEMGKVIDKTFIQSKMLNQSKGPAVHSLRAQADKSDYSKEMRRVLEEQDNLDIRQMEVT 134 Query: 125 ---AGFNTEKNI--ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 A E I I + ++ C V+L TGT+L+ G++ G G + Sbjct: 135 DIIADDPNESGIRKIKGVQTYSGAIYPCKAVILCTGTYLKARCIYGEISTQTGPNGLQSA 194 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KITNRQ 237 N L +S R KTGTPAR+D +I + K E+Q DER++PFSF TD + Q Sbjct: 195 NYLTDSLKSLGIKMYRFKTGTPARIDKNSIDFTKMEEQKGDERVVPFSFTTDPEDVQIDQ 254 Query: 238 IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 + C +T TN TH II EN+ S ++SG I+ GPRYCPSIEDK+V+F ++N HQ+F+EP Sbjct: 255 VSCWLTYTNETTHEIIRENLDRSPLFSGAIEGTGPRYCPSIEDKVVKFPDKNRHQVFIEP 314 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EG++T+ +Y G+S++LPE++Q+ R++PGLE I+R YAIEYD I+ ++L TLE Sbjct: 315 EGIHTNEMYVGGMSSSLPEDVQYAMYRSVPGLEHAKIVRNAYAIEYDCIDARQLKSTLEF 374 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 K I GLF GQ NG++GYEEAAAQG+VAGIN+ARK + I R+ YIGV+IDDL + Sbjct: 375 KNIEGLFSGGQFNGSSGYEEAAAQGIVAGINAARKLQGKEGIVIDRSQGYIGVLIDDLVT 434 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL 477 K EPYRM TSRAEYR+ LR DNAD RLT IG K+G I E +R+ K +++ + Sbjct: 435 KESREPYRMMTSRAEYRLLLRQDNADQRLTKIGYKIGLISE---ERYEKLLEKERLIEEE 491 Query: 478 LKSL----VLTSKNLSSTSISFKQDGKTR--TAYEFLSYPDFSIQNLFSICPDARKFSSL 531 + + + TS+ + + +++ T T E + P+ S + L I + + Sbjct: 492 IHRVERVNIGTSEEVQNLLKTYESTPLTSGTTLAELIRRPELSYEKLAPIDKNRKNLPED 551 Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 V +++ I Y Y RQM + ++ K E + IP+D +Y + +L E K+KL+ ++P + Sbjct: 552 VAQQVDINIKYDGYIKRQMRQVEQFKKLENKKIPEDINYDEIKSLRIEAKQKLNQIRPAS 611 Query: 592 LLQASKIEGMTPAALNLLLIYI 613 + QAS+I G++PA +++LL+Y+ Sbjct: 612 IGQASRISGVSPADVSVLLVYL 633 >gi|217967499|ref|YP_002353005.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Dictyoglomus turgidum DSM 6724] gi|217336598|gb|ACK42391.1| glucose inhibited division protein A [Dictyoglomus turgidum DSM 6724] Length = 619 Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust. Identities = 271/621 (43%), Positives = 369/621 (59%), Gaps = 19/621 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAGCEAA A++LG LIT T+G + CNPA+GG GKGHL+ EIDAL Sbjct: 4 YDVIVVGGGHAGCEAAYAASRLGVRVLLITMNYDTVGWLPCNPAMGGPGKGHLIMEIDAL 63 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GL GR+ + + IQ ++LN KGPAVR R Q D+ +Y M+ + S +NL++ QGEV Sbjct: 64 GGLTGRITNRSMIQVKMLNTSKGPAVRALRAQVDKWIYPAKMREFLESIKNLEIYQGEVV 123 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E N + +++ VV+T GTF+ GVIHI PAGRM + PS L ++ Sbjct: 124 DLIVEDNEVKGVILSTKKEFYAERVVITPGTFMNGVIHISTWSKPAGRMNEFPSVGLSDA 183 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + + GR TGT R+D +TI + KT Q DE L FSF + Q+ +TRT Sbjct: 184 LRRLGLEVGRFNTGTTPRVDKRTIDFSKTIIQPGDEELHSFSFWEEPEPREQVPSYLTRT 243 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 +T I++ NI +A G + GPRYCPSIE+K + F + HQ+FLEPEG N+ + Sbjct: 244 TQKTKEIVLANIHLTASRIGGMVKKGPRYCPSIEEKYIWFPDHETHQVFLEPEGRNSVEI 303 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y GI T+LPEEIQ Q +R+IPGLE+V +IRPGYAI YD + P +L TLETKKI GL+L Sbjct: 304 YVQGIYTSLPEEIQIQILRSIPGLEEVELIRPGYAIAYDMVYPHQLKFTLETKKIKGLYL 363 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAAAQGLVAG N+A + + R + YIGV+IDDL +KGV EPYR Sbjct: 364 AGQINGTTGYEEAAAQGLVAGANAALSLIGKEPLIIRRDEGYIGVLIDDLVTKGVDEPYR 423 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 + TSRAEYRI LR DNAD RLTP KLG I E K F + ++ + + L+ + + Sbjct: 424 ILTSRAEYRILLRADNADQRLTPKAYKLGLISEDMWKMFQEKMERIKYEKKRLERVSVQP 483 Query: 486 KNLSSTSISFKQDGKTRTAYEF----------LSYPDFSIQNLFSICPDARKFSSLVIER 535 + ++ + + G + ++Y D L P +K+ V Sbjct: 484 EEINGILL---EKGTSPIVQPIPLVRIIKRPEITYDDLERIGLAGDLP--KKWRDTV--- 535 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 + + Y Y +++ + KE + E IP D DY +P LS E +EKL ++P+ QA Sbjct: 536 -ETDIKYEGYIKKELDKVKEFQEYESLEIPHDIDYGKIPHLSREGREKLEKVRPYTFGQA 594 Query: 596 SKIEGMTPAALNLLLIYIKKN 616 +I G+ L +LL Y+++ Sbjct: 595 MRITGVNAGDLTVLLYYLREK 615 >gi|108562639|ref|YP_626955.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Helicobacter pylori HPAG1] gi|123373846|sp|Q1CUU1|MNMG_HELPH RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|107836412|gb|ABF84281.1| glucose inhibited division protein A [Helicobacter pylori HPAG1] Length = 621 Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust. Identities = 281/627 (44%), Positives = 375/627 (59%), Gaps = 16/627 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M+ S D++V+GGGHAG EA+ +AAK+GA LIT TIG SCNPAIGGLGKGHL + Sbjct: 1 MVKES-DILVVGGGHAGIEASLIAAKMGARVHLITMLIDTIGLASCNPAIGGLGKGHLTK 59 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+D L G MG + D +G+Q+RVLN KGPAVRG R Q D + YR+ + +L+ NL V Sbjct: 60 EVDVLGGAMGIITDNSGLQYRVLNASKGPAVRGTRAQIDMDTYRIFARNLVLNTPNLSVS 119 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q E + + + N+ R V++TTGTFL+GV+HIG+ + GR G++ SN Sbjct: 120 QEMTESLILENDEVVGVTTNINNTYRAKKVIITTGTFLKGVVHIGEHQNQNGRFGENASN 179 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 SL + + F RLKTGT R+ G +I ++ E+ F D FS+ T Q+ C Sbjct: 180 SLALNLRELGFKVDRLKTGTCPRVAGNSIDFEGLEEHFGDTNPPYFSYKTKDFNPTQLSC 239 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN TH+II +N + ++SG I+ GPRYCPSIEDKI RF E+ HQ+FLEP+ + Sbjct: 240 FITYTNPITHQIIRDNFHRAPLFSGQIEGIGPRYCPSIEDKINRFSEKERHQLFLEPQTI 299 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + Y NG+ST+LP ++Q + I +I GLE I R GYAIEYD+I P EL TLETKKI Sbjct: 300 HKSEYYINGLSTSLPLDVQEKVIHSIKGLENALITRYGYAIEYDFIQPTELTHTLETKKI 359 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GL+LAGQINGTTGYEEAAAQGL+AGIN+ R ++YIGV+IDDL +KG Sbjct: 360 KGLYLAGQINGTTGYEEAAAQGLMAGINAVLALKNQAPFILKRNEAYIGVLIDDLVTKGT 419 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DN RL +LG + + K K Q LK Sbjct: 420 NEPYRMFTSRAEYRLLLREDNTLFRLGEHAYRLGLMEQDFYKELKKDQQAIQENLKRLKE 479 Query: 481 LVLTS--------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV 532 VLT L I+ K DG + L+ F+ + + S + V Sbjct: 480 YVLTPSKEVLKRLNELDENPINDKVDGIS-----LLARDSFNAEKMRSFFSFLAPLNERV 534 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 +E+++IE Y Y +Q ++ K IPKDF + +P LS E EKL +P +L Sbjct: 535 LEQIKIECKYNIYIEKQHENIAKMDSMLKVSIPKDFVFKGIPGLSLEAVEKLEKFRPKSL 594 Query: 593 LQASKIEGMTPAALNLLLIYI--KKNT 617 +AS+I G+TPA L++L +YI +KN+ Sbjct: 595 FEASEISGITPANLDVLHLYIHLRKNS 621 >gi|332244026|ref|XP_003271171.1| PREDICTED: LOW QUALITY PROTEIN: protein MTO1 homolog, mitochondrial-like [Nomascus leucogenys] Length = 717 Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust. Identities = 287/655 (43%), Positives = 408/655 (62%), Gaps = 50/655 (7%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA+ G+ T L+TH+ TIG MSCNP+ GG+GKGHL+RE+DAL Sbjct: 37 FDVIVIGGGHAGTEAATAAARCGSRTLLLTHRVDTIGQMSCNPSFGGIGKGHLMREVDAL 96 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGL R+ D +G+ ++VLN +KGPAV G R Q DR+LY+ MQ+EIL+ L V +G V Sbjct: 97 DGLCSRICDQSGVHYKVLNRRKGPAVWGLRAQIDRKLYKQNMQKEILNTPLLTVQEGAVE 156 Query: 126 GF--------NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 +T K +S V D S + +V+LTTGTF RG+I IG PAGR+GD Sbjct: 157 DLILTEPEPEHTGKCRVSGAVFMDGSTVYAESVILTTGTFXRGMIVIGLETHPAGRLGDQ 216 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR- 236 PS L + K F GRLKTGTP R+ ++I + K D+ IPFSF + + + Sbjct: 217 PSIGLAQTLEKLGFVVGRLKTGTPPRIAKESINFSILNKHTPDDPSIPFSFTNETVWIKP 276 Query: 237 --QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 Q+ C +T TN + I+++N+ ++ + GPRYCPSIE K++RF R HQ++ Sbjct: 277 EDQLPCYLTHTNPKVDEIVLKNLHLNSHVKETTR--GPRYCPSIESKVLRFPNRL-HQVW 333 Query: 295 LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRP----------------- 337 LEPEG+++D++YP G+S LP E+Q + I I GLEK +I+P Sbjct: 334 LEPEGMDSDLIYPQGLSMTLPAELQEKMITCIRGLEKAKVIQPDGVLLLLPRMECNGAIS 393 Query: 338 --------GYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINS 389 GY ++YDY++P+++ P+LET + LF AGQINGTTGYEEAAAQG++AGIN+ Sbjct: 394 SHHNLPLPGYGVQYDYLDPRQITPSLETHLVQRLFFAGQINGTTGYEEAAAQGVIAGINA 453 Query: 390 ARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPI 449 + + ++ SRT+ YIGV+IDDLT+ G EPYRMFTSR E+R+SLRPDNAD+RLT Sbjct: 454 SLRVSRKPPFVVSRTEGYIGVLIDDLTTLGTSEPYRMFTSRVEFRLSLRPDNADSRLTLR 513 Query: 450 GMK-LGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS---KNL-SSTSISFKQDGKTRTA 504 G K GC+ ++R +R S+LKS+ +S KNL SIS + R A Sbjct: 514 GYKDAGCVSQQRYERACWMKSSLEEGISVLKSIEFSSSKWKNLIPEASISTSRSLPVR-A 572 Query: 505 YEFLSYPDFSIQNLFSICPDA-RKFSSL--VIERLQIESSYAAYTGRQMIEAKEIKFEEK 561 + L Y + + +L P+ +K++ + ERL+IE++Y + Q+ E KE++ +E Sbjct: 573 LDVLKYEEVDMDSLAKAVPEPLKKYTKCRELAERLKIEATYESVLFHQLQEIKEVQQDEA 632 Query: 562 RLIPKDFDYSSLP--ALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIK 614 +PKD DY ++ +LS+E++EKL +P + AS+I G+TPAA+ LL ++K Sbjct: 633 LQLPKDLDYLTIRDVSLSHEVREKLHFSRPQTIGAASRIPGVTPAAIINLLRFVK 687 >gi|332971196|gb|EGK10159.1| glucose inhibited division protein A [Desmospora sp. 8437] Length = 628 Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust. Identities = 269/615 (43%), Positives = 386/615 (62%), Gaps = 7/615 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DV+VIG GHAGCEAA AA++G ST L+T TI M CNP+IGG KGH+VRE+DAL Sbjct: 8 FDVVVIGAGHAGCEAALAAARMGCSTLLLTLSLDTIAYMPCNPSIGGPAKGHVVREVDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MGR D IQ R+LN KGPAV R QAD+ LY+ M++ + S+ L + Q V Sbjct: 68 GGEMGRNIDKTHIQMRMLNTGKGPAVYALRAQADKVLYQQEMKKTLESEPRLLLHQNMVE 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + ++ + + +VVLTTGT+LRG I IG L +G PS +L + Sbjct: 128 RLLVEDGVCRGVLTRTGAKYYAKSVVLTTGTYLRGKIIIGDLTYESGPNNQQPSINLAHH 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + +T R KTGTP R++ T+ DK E Q D+ FS+ T + Q+ C +T T Sbjct: 188 LHELGLETVRFKTGTPPRVNKLTVDTDKMEIQPGDDEPRAFSYETTEYNTDQLPCWLTYT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N +TH I +N+ + +YSG I+ GPRYCPSIEDKIVRF +++ HQIFLEPEG T + Sbjct: 248 NEKTHEFIRDNLHRAPMYSGVIEGQGPRYCPSIEDKIVRFADKSRHQIFLEPEGRETLEM 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+ST+LPEEIQ +RTI GLE V ++R GYAIEYD I P +L+P+LETK+++ LF Sbjct: 308 YVQGLSTSLPEEIQQPLLRTIDGLENVEMMRTGYAIEYDAIIPTQLWPSLETKRVANLFT 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGT+GYEEAAAQG++AGIN+ARK + + R+ +YIGV+IDDL +KG EPYR Sbjct: 368 AGQINGTSGYEEAAAQGIMAGINAARKVRGEEPVILDRSQAYIGVLIDDLVTKGTNEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 + TSRAEYR+ LR DNAD RLT +G ++G I E R +RF K + L+ +L Sbjct: 428 LLTSRAEYRLLLRHDNADLRLTDLGYEVGLIPEERYRRFRKKREAIEGEIQRLRETIL-- 485 Query: 486 KNLSSTSISFKQDGKTRTAY-----EFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 K ++ G + + + + P+ I+++ + P + V E+++I+ Sbjct: 486 KPTPEVQALLRKVGSSELDHAVELSKLIKRPEVKIEHIHQLSPPEEPVTPEVAEQVEIQL 545 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y + + + ++++ E + IP DY + +S+E KEKL+ ++P +L QAS+I G Sbjct: 546 KYEGYIKKSLQQVEKMRKMENKRIPDWVDYDQVKGISSEAKEKLNQVRPLSLGQASRISG 605 Query: 601 MTPAALNLLLIYIKK 615 + P+ +++LLI++++ Sbjct: 606 VNPSDISILLIHLEQ 620 >gi|323487693|ref|ZP_08092951.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Planococcus donghaensis MPA1U2] gi|323398427|gb|EGA91215.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Planococcus donghaensis MPA1U2] Length = 629 Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust. Identities = 277/619 (44%), Positives = 391/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+G GHAG EAA +A++GA T ++T I M CNP+IGG KG +VREIDA Sbjct: 8 TFDVIVVGAGHAGAEAALASARMGAKTLVLTMNLDMIAFMPCNPSIGGPAKGIVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGRV D IQ R+LN KGPAVR R QAD+ LY+ M+R + + NL + QG Sbjct: 68 LGGAMGRVIDKTHIQMRMLNTAKGPAVRALRAQADKVLYQQEMKRLMEEEPNLSLHQGIA 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E I ++ Q + R ++VV+TTGTFLRG I IG L+ +G PS L Sbjct: 128 EELIVEDGKIQGLITQVGGIYRANSVVITTGTFLRGEIIIGDLRYSSGPNNQQPSIKLAE 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + K F+T R KTGTP R++ +I + KTE Q D+ FS+ T + Q+ C +T Sbjct: 188 NLEKLGFETVRFKTGTPPRVNSNSIDYSKTEIQPGDDVPRAFSYETTEYITDQLPCWLTY 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN ETH++I +N+ S +YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 248 TNEETHQVIDDNLHLSPMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTRE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE +Q + + +IPGLEK ++R GYAIEYD I P +L+PTLE+K+I L+ Sbjct: 308 VYVQGLSTSLPEHVQRKLLESIPGLEKAEMMRAGYAIEYDAIVPTQLWPTLESKQIENLY 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A K + + SR+D+YIGV+IDDL +KG EPY Sbjct: 368 TAGQINGTSGYEEAAGQGLMAGINAAAKVLGKEEVILSRSDAYIGVLIDDLVTKGTNEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF----AKYIQEYNFLRS-LLK 479 R+ TSRAEYR+ LR DNAD RLT +G +G + E R +F + +E LRS ++K Sbjct: 428 RLLTSRAEYRLLLRHDNADMRLTELGYAIGMVKEDRYVKFLSKKERIEEEIKRLRSVMIK 487 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 T + + S +DG R A + L P+ + + + V E+++I Sbjct: 488 PNETTQQTIRDAGGSELKDG-IRGA-DLLKRPEMTYDMISQLTASPVDLEDEVKEQVEIH 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + +++ ++K E + IP + DY ++ ++ E + KL+ ++P ++ QAS+I Sbjct: 546 IKYEGYIEKSLMQVDKLKKMENKKIPDNIDYHAISGIATEARGKLAEVRPLSIAQASRIS 605 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 606 GVNPADISILLVYIEQGKI 624 >gi|126310383|ref|XP_001373515.1| PREDICTED: similar to MTO1 protein [Monodelphis domestica] Length = 689 Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust. Identities = 289/636 (45%), Positives = 406/636 (63%), Gaps = 27/636 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+VIGGGHAG EAAA AA+ G+ T L+TH+ +IG MSCNP+ GG+GKGHL+RE+DAL Sbjct: 34 YDVVVIGGGHAGTEAAAAAARCGSRTLLLTHRVDSIGQMSCNPSFGGIGKGHLMREVDAL 93 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGL RV D +GI ++VLN +KGPAV G R Q DR+LY+ MQ EIL+ L V + V Sbjct: 94 DGLCSRVCDQSGIHYKVLNRRKGPAVWGLRAQIDRKLYKQKMQEEILTIPLLTVQESSVE 153 Query: 126 GF--------NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 + K +S +V++D S + +V+LTTGTFLRG+I IG PAGR+GD Sbjct: 154 DLLLMEPDLDHPGKCCVSGVVLEDGSRVYAESVILTTGTFLRGMILIGLESYPAGRLGDR 213 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR- 236 PS L + K F GRLKTGTP R+ +I + KQ D +PFSF+ + + + Sbjct: 214 PSIGLAQTLEKLGFVVGRLKTGTPPRIARDSINFSILNKQMPDNPSVPFSFLNEAVWIKP 273 Query: 237 --QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 Q+ C +T TN +I+ ENI + K GPRYCPSIE K++RF R HQ++ Sbjct: 274 EDQLPCYLTHTNSRVDQIVKENIHLNTHIKETTK--GPRYCPSIESKVLRFPNRI-HQVW 330 Query: 295 LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT 354 LEPEG++++++YP G+S LP +Q Q I +I GLEK I++PGY ++YDY++P+++ P+ Sbjct: 331 LEPEGMDSNLIYPQGLSMTLPPNVQEQLITSIRGLEKAKIVQPGYGVQYDYLDPRQITPS 390 Query: 355 LETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDD 414 LET + LF AGQINGTTGYEEAAAQG++AGIN++ + N SRT+ YIGV+IDD Sbjct: 391 LETLLVQRLFFAGQINGTTGYEEAAAQGIIAGINASLRVNGKPPFIVSRTEGYIGVLIDD 450 Query: 415 LTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMK-LGCIGERRQKRFAKYIQEYNF 473 LT+ G EPYRMFTSR E+R+SLRPDNAD+RLT G K GC+ ++R R + Sbjct: 451 LTTLGTSEPYRMFTSRVEFRLSLRPDNADSRLTLRGYKETGCVSQQRYNRASLMKSSLEE 510 Query: 474 LRSLLKSLVLT----SKNLSSTSIS-FKQDGKTRTAYEFLSYPDFSIQNLFSICPDA-RK 527 S+LKSL + K + +S +K D ++A + L Y + + L + P+ +K Sbjct: 511 GISVLKSLQFSGYKWKKLIPEAPVSIYKSD--PQSALDMLKYEEVDMTVLAKVLPEPLKK 568 Query: 528 FSSL--VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSL--PALSNELKEK 583 F+ ++ RL+IE++Y Q E +E++ +E +P+D DY ++ +LSNE++EK Sbjct: 569 FAECQELMNRLKIEATYELSLILQQQEIEEVQRDEALQLPEDLDYLTIRDVSLSNEVREK 628 Query: 584 LSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 L +P + AS+I GMTPAA+ LL ++K K Sbjct: 629 LHSSRPQTIGAASRIPGMTPAAILNLLRFVKTTQQK 664 >gi|254778922|ref|YP_003057027.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Helicobacter pylori B38] gi|254000833|emb|CAX28761.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA (Glucose-inhibited division protein A) [Helicobacter pylori B38] Length = 621 Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust. Identities = 282/627 (44%), Positives = 375/627 (59%), Gaps = 16/627 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M+ S D++V+GGGHAG EA+ +AAK+GA LIT TIG SCNPAIGGLGKGHL + Sbjct: 1 MVKES-DILVVGGGHAGIEASLIAAKMGARVHLITMLIDTIGLASCNPAIGGLGKGHLTK 59 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+D L G MG + D +G+Q+RVLN KGPAVRG R Q D + YR+ + +L+ NL V Sbjct: 60 EVDVLGGAMGIITDHSGLQYRVLNASKGPAVRGTRAQIDMDTYRIFARNLVLNTPNLSVS 119 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q E + + + N+ R V++TTGTFL+GV+HIG+ + GR G++ SN Sbjct: 120 QEMTESLILENDEVVGVTTNINNTYRAKKVIITTGTFLKGVVHIGEHQNQNGRFGENASN 179 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 SL + + F RLKTGT R+ G +I ++ E+ F D FS+ T Q+ C Sbjct: 180 SLALNLRELGFKVDRLKTGTCPRVAGNSIDFEGLEEHFGDTNPPYFSYKTKDFNPTQLSC 239 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN TH+II +N + ++SG I+ GPRYCPSIEDKI RF E+ HQ+FLEP+ + Sbjct: 240 FITYTNPITHQIIRDNFHRAPLFSGQIEGIGPRYCPSIEDKINRFSEKERHQLFLEPQTI 299 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + Y NG+ST+LP ++Q + I +I GLE I R GYAIEYD+I P EL TLETKKI Sbjct: 300 HKSEYYINGLSTSLPLDVQEKVIHSIKGLENALITRYGYAIEYDFIQPTELTHTLETKKI 359 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GL+LAGQINGTTGYEEAAAQGL+AGIN+A R ++YIGV+IDDL +KG Sbjct: 360 KGLYLAGQINGTTGYEEAAAQGLMAGINAALALKNQAPFILKRNEAYIGVLIDDLITKGT 419 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DN RL LG + + K K Q LK Sbjct: 420 NEPYRMFTSRAEYRLLLREDNTLFRLGEHAYNLGLMEQDFYKELEKDKQAIQENLKRLKE 479 Query: 481 LVLTS--------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV 532 VLT L I+ K DG + L+ F+I+ + S + V Sbjct: 480 CVLTPSKEALKRLSELDENPINDKVDGVS-----LLARDSFNIEKMRSFFSFLAPLNERV 534 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 +E+++IE Y Y +Q ++ K IPK F + +P LS E EKL +P +L Sbjct: 535 LEQIKIECKYNIYIEKQHENIAKMDSMLKVSIPKHFVFKGIPGLSLEAVEKLEKFRPKSL 594 Query: 593 LQASKIEGMTPAALNLLLIYI--KKNT 617 +AS+I G+TPA L++L +YI +KN+ Sbjct: 595 FEASEISGITPANLDVLHLYIHLRKNS 621 >gi|73973765|ref|XP_532202.2| PREDICTED: similar to mitochondrial translation optimization 1 homolog isoform IV [Canis familiaris] Length = 672 Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust. Identities = 293/638 (45%), Positives = 415/638 (65%), Gaps = 29/638 (4%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DV+VIGGGHAG EAAA AA+ G+ T L+TH+ TIG MSCNP+ GG+GKGHL+RE+DA Sbjct: 36 NFDVVVIGGGHAGTEAAAAAARCGSRTLLLTHRVDTIGQMSCNPSFGGIGKGHLMREVDA 95 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGL R+ D +G+ ++VLN +KGPAV G R Q DR+LY+ MQ+EIL+ L V +G V Sbjct: 96 LDGLCSRICDQSGVHYKVLNRRKGPAVWGLRAQIDRKLYKRNMQKEILNTPLLTVQEGAV 155 Query: 125 AGF--------NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGD 176 +T K +S +V+ D S + +VVLTTGTFLRGVI IG PAGR+GD Sbjct: 156 EDLILTEPEPEHTGKCRVSGVVLADGSTVHAESVVLTTGTFLRGVIVIGLEMHPAGRLGD 215 Query: 177 SPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR 236 PS L + K F GRLKTGTP R+ +++ + KQ D IPFSF+++ + + Sbjct: 216 QPSVGLAQTLEKLGFVVGRLKTGTPPRIAKESVNFSILNKQTPDNPSIPFSFVSETVWIK 275 Query: 237 ---QIECGITRTNLETHRIIMENIKHSAIYSGDIK--SYGPRYCPSIEDKIVRFGERNGH 291 Q+ C +T TN I++EN+ + IK + GPRYCPSIE K++RF R H Sbjct: 276 PEDQLPCYLTHTNPRVDEIVLENLH----LNSHIKETTRGPRYCPSIESKVLRFPNRL-H 330 Query: 292 QIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKEL 351 Q++LEPEG++++++YP G+S LP E+Q + I I GLEK +I+PGY ++YDY++P+++ Sbjct: 331 QVWLEPEGMDSELIYPQGLSVTLPAELQEKMITCIKGLEKAKMIQPGYGVQYDYLDPRQI 390 Query: 352 FPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 P+LET + LF AGQINGTTGYEEAAAQG++AGIN++ + SRT+ YIGV+ Sbjct: 391 TPSLETHLVQRLFFAGQINGTTGYEEAAAQGVIAGINASLRVKHKPPFVVSRTEGYIGVL 450 Query: 412 IDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMK-LGCIGERRQKRFAKYIQE 470 IDDLT+ G EPYRMFTSRAE+R+SLRPDNAD+RLT G K +GC+ ++R +R + Sbjct: 451 IDDLTTLGTNEPYRMFTSRAEFRLSLRPDNADSRLTFRGYKEVGCVSQQRYERASWMKSS 510 Query: 471 YNFLRSLLKSLVLTS----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA- 525 S+LKS+ +S K + SIS + R A + L Y + ++ L P+ Sbjct: 511 LEEGISVLKSIEFSSSKWKKLIPEASISIVKSLPLR-ALDVLKYEEVDMKLLAKAVPEPL 569 Query: 526 RKF--SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSL--PALSNELK 581 +K+ S + ERL+IE++Y + Q + KE++ +E +PKD DY +L +LS E++ Sbjct: 570 KKYVESRELAERLKIEATYESVLFHQQQQIKEVQQDEALQLPKDLDYLTLRDVSLSYEVR 629 Query: 582 EKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 EKL ++P + AS+I G+TPAA+ LL ++K K Sbjct: 630 EKLHFIRPETIGAASRIPGVTPAAIINLLRFVKTTQQK 667 >gi|157820343|ref|NP_001100311.1| protein MTO1 homolog, mitochondrial [Rattus norvegicus] gi|149019088|gb|EDL77729.1| mitochondrial translation optimization 1 homolog (S. cerevisiae) (predicted) [Rattus norvegicus] Length = 679 Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust. Identities = 284/631 (45%), Positives = 409/631 (64%), Gaps = 27/631 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DV+VIGGGHAG EAAA AA+ G+ T L+TH+ TIG MSCNP+ GG+GKGHL+RE+DAL Sbjct: 36 FDVVVIGGGHAGTEAAAAAARCGSRTLLLTHRVDTIGQMSCNPSFGGIGKGHLMREVDAL 95 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV- 124 DGL RV D +GI ++VLN +KGPAV G R Q DR+LY+ MQ+EILS L V +G V Sbjct: 96 DGLCSRVCDQSGIHYKVLNRRKGPAVWGLRAQIDRKLYKQNMQKEILSTPLLTVQEGAVE 155 Query: 125 --------AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGD 176 G+ K+ + +V+ D S + +VVLTTGTFLRG + IG PAGR+GD Sbjct: 156 DLVLAEPEPGYGG-KSRVRGVVLADGSTMHAESVVLTTGTFLRGALIIGLEVHPAGRLGD 214 Query: 177 SPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR 236 PS L + K F GRLKTGTP RL ++I + + AD IPFSF++D + + Sbjct: 215 QPSIGLAQTLEKLGFMVGRLKTGTPPRLAKESINFSILHEHTADNPPIPFSFLSDDVWIK 274 Query: 237 ---QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQI 293 Q+ C +T TN +++EN+ ++ + GPRYCPSIE K++RF R HQ+ Sbjct: 275 PEDQLPCYLTHTNPRVDELVLENLHLNSHVKETTR--GPRYCPSIESKVLRFPNRL-HQV 331 Query: 294 FLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFP 353 +LEPEG+++D++YP G+S LP E+Q + I I GLEK ++ PGY ++YDY++P+++ P Sbjct: 332 WLEPEGMDSDLIYPQGLSVTLPAELQEKMITCIRGLEKAKMVHPGYGVQYDYLDPRQISP 391 Query: 354 TLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMID 413 +LET + LF AGQINGTTGYEEAAAQG++AGIN++ + ++ SRT+ YIGV+ID Sbjct: 392 SLETHLVQRLFFAGQINGTTGYEEAAAQGVIAGINASLRVSRKPPFVVSRTEGYIGVLID 451 Query: 414 DLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMK-LGCIGERRQKRFAKYIQEYN 472 DLT+ G EPYRMFTSR E+R+SLRPDNAD RLT + GC+ +R KR Sbjct: 452 DLTTLGTSEPYRMFTSRVEFRLSLRPDNADTRLTFRAHEDAGCVSPQRYKRALWMKSSLE 511 Query: 473 FLRSLLKSLVLTS----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA-RK 527 S+LKS+ +S K + IS + +A + L Y + +++L S+ P+ +K Sbjct: 512 EGISVLKSIKFSSSKWKKLIPQAPISINRSLPV-SALDVLKYEEVDMESLASVVPEPLKK 570 Query: 528 FSSL--VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLP--ALSNELKEK 583 +++ + RL+IE++Y + Q+ E KE++ +E +P+D DY ++ +LS E++EK Sbjct: 571 YTACRELARRLKIEATYESVLLYQLQEIKEVQQDEALQLPQDLDYLTIKDVSLSQEVREK 630 Query: 584 LSILKPFNLLQASKIEGMTPAALNLLLIYIK 614 L + +P + AS+I G+TPAA+ LL +++ Sbjct: 631 LHLSRPQTIGAASRIPGVTPAAIINLLRFVR 661 >gi|322386458|ref|ZP_08060087.1| glucose inhibited division protein A [Streptococcus cristatus ATCC 51100] gi|321269544|gb|EFX52475.1| glucose inhibited division protein A [Streptococcus cristatus ATCC 51100] Length = 660 Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust. Identities = 266/626 (42%), Positives = 382/626 (61%), Gaps = 26/626 (4%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DA Sbjct: 32 SYDVIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDA 91 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M + D + IQ ++LN KGPAVR R QAD+ELY M++ + +QENL + Q Sbjct: 92 LGGEMAKNIDKSYIQMKMLNTGKGPAVRALRAQADKELYSKEMRKTVENQENLTLRQ--- 148 Query: 125 AGFNTEKNIISSIVMQDNSMIRCST----------VVLTTGTFLRGVIHIGKLKIPAGRM 174 +I+ I+++D +I T V++TTGT LRG I IG LK +G Sbjct: 149 -------TMINEILVEDGKVIGVKTATQQEYAAKAVIVTTGTALRGEIIIGDLKYSSGPN 201 Query: 175 GDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DK 232 + L ++ F+ GR KTGTP R+ +I +D TE Q DE+ FS+ + + Sbjct: 202 HSLAAIPLADNLRDLGFEIGRFKTGTPPRVKASSINYDVTEIQPGDEKANHFSYTSRDED 261 Query: 233 ITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQ 292 Q+ C +T TN E+H II N+ + ++SG +K GPRYCPSIEDKIVRF ++ HQ Sbjct: 262 YVKDQVPCWLTYTNAESHEIIQNNLHRAPMFSGIVKGVGPRYCPSIEDKIVRFADKERHQ 321 Query: 293 IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF 352 +FLEPEG +T+ VY G+ST+LPE++Q + +I GLE ++R GYAIEYD I P +L Sbjct: 322 LFLEPEGRDTEEVYVQGLSTSLPEDVQKDLVHSIKGLENAEMMRTGYAIEYDMIMPHQLR 381 Query: 353 PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMI 412 TLETKKISGLF AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMI Sbjct: 382 ATLETKKISGLFTAGQTNGTSGYEEAAGQGIIAGINAALKIQGKPELILKRSDGYIGVMI 441 Query: 413 DDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYN 472 DDL +KG +EPYR+ TSRAEYR+ LR DNAD RLT IG ++G + + R RF +++ Sbjct: 442 DDLVTKGTVEPYRLLTSRAEYRLILRHDNADMRLTEIGREIGLVDDERWARFEIKKNQFD 501 Query: 473 FLRSLLKSLVL---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKF 528 L+S+ L N ++ FK TA EF+ P+ S Q++ I P A + Sbjct: 502 NEMKRLESIKLKPVKETNAKIEALGFKALTDAVTAKEFMRRPEVSYQDVVQFIGPAAEEL 561 Query: 529 SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 +IE ++ E Y Y + + + +++K E++ IP + D+ + +++ E ++K + Sbjct: 562 DEKIIELIETEIKYEGYISKALDQVEKMKRMEEKRIPANIDWDDIDSIATEARQKFKKIN 621 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIK 614 P + QAS+I G+ PA +++L++Y++ Sbjct: 622 PETIGQASRISGVNPADISILMVYLE 647 >gi|257437745|ref|ZP_05613500.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Faecalibacterium prausnitzii A2-165] gi|257199760|gb|EEU98044.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Faecalibacterium prausnitzii A2-165] Length = 624 Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust. Identities = 274/615 (44%), Positives = 371/615 (60%), Gaps = 10/615 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAG EAA AA LGA TA+ T IG+M CNP+IGG KG LVRE+DAL Sbjct: 7 YDVIVIGAGHAGIEAAHAAATLGAKTAVFTMSLDAIGNMPCNPSIGGTAKGTLVRELDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+MG ADA +Q R+LN KGPAV R Q DR+ Y M+ + L + Q EV Sbjct: 67 GGVMGLAADATYLQSRMLNKGKGPAVHALRVQTDRKRYHEYMKHALELTPGLAIHQAEVV 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 G E + +V Q N VV+ TGT L G I +G +G G +N+L S Sbjct: 127 GIEVENGHVKGVVTQLNGEYSAKCVVIATGTNLGGKIFVGDAWYASGPDGMHAANALTES 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFAD--ERLIPFSFMTDKITNRQIECGIT 243 R KTGTPAR+ ++I + K E Q D L PFSF+TD + ++EC I Sbjct: 187 LKAAGLPLRRFKTGTPARVHRRSIDFSKLECQPGDPDSELQPFSFLTDAPMHNKVECWIA 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN ETHRII++NI+ S +Y G I+ GPRYCPSIEDK+VRF ++ H IF+EP G NT+ Sbjct: 247 YTNPETHRIILDNIQRSPLYGGMIEGVGPRYCPSIEDKVVRFAGKDRHPIFVEPCGENTE 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G S++LPE++Q+ F R+I G E + I+RP YAIEYD ++P L TLE+K + GL Sbjct: 307 EMYLQGASSSLPEDVQNAFYRSIQGFEHIEIMRPAYAIEYDCVDPTSLEATLESKVVRGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQ NGT+GYEEAAAQGL+AG+N+AR + + R SY+G ++DDL +KGV++P Sbjct: 367 YGAGQFNGTSGYEEAAAQGLLAGLNAARSAKGESQLILERQTSYLGTLVDDLVTKGVMDP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRM TSR+EYR++LR DNAD RLTPIG + G + + R+AKY + L + + L Sbjct: 427 YRMMTSRSEYRLTLRQDNADQRLTPIGREYGLV---QDDRWAKYQHTQSILEAERRRLHE 483 Query: 484 TSKNLSSTSISFKQDGKTRT-----AYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 T + + + G T A E L P+ S L + + ++ ERL+ Sbjct: 484 THLRTADLRAAMEAAGLTPAAEGGIAEELLRRPEISYPLLAGVIGWGEGITPMLAERLET 543 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E YA Y RQ +++ EK LIP DF+Y+ L L+ E +EKL+ ++P NL QA +I Sbjct: 544 EIKYAGYIARQDRMIRDVARHEKTLIPADFEYADLTGLTLEAREKLTRIRPKNLGQAGRI 603 Query: 599 EGMTPAALNLLLIYI 613 G++P+ + L I + Sbjct: 604 PGVSPSDVAQLSIAL 618 >gi|260881794|ref|ZP_05405237.2| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Mitsuokella multacida DSM 20544] gi|260847903|gb|EEX67910.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Mitsuokella multacida DSM 20544] Length = 636 Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust. Identities = 271/633 (42%), Positives = 394/633 (62%), Gaps = 20/633 (3%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAG EAA AA++G T L T I M CNP++GG GKGHLVRE+DA Sbjct: 7 SYDVIVIGAGHAGVEAALAAARIGCRTLLATLSMDNIALMPCNPSVGGPGKGHLVRELDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG AD IQFR+LN KGPAV R QAD++LY+ M+ ENLDV Q + Sbjct: 67 LGGEMGVNADKTCIQFRMLNTGKGPAVHALRAQADKKLYQFTMKETCEKTENLDVKQILI 126 Query: 125 AGF--NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 +K + ++++ + +++ TGT+LRG I +G+ G G P+ Sbjct: 127 TDLLLTEDKKAVRGVLVETGEVYLAPAIIMATGTYLRGRIIVGEHTYSGGPNGQRPAMKF 186 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGI 242 +S R KTGTPAR+D +T+ ++K + Q DE FSFM+D+ T Q+ C + Sbjct: 187 SDSLKAAGIRLMRFKTGTPARVDARTLDYEKMQIQPGDEEARNFSFMSDERTREQVPCWL 246 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH+I+ +N+ + + +G I+ GPRYCPSIE KI+RF +++ HQ+FLEPEGL+T Sbjct: 247 TYTNEATHKILRDNMDRAPMANGIIEGIGPRYCPSIETKILRFPDKDRHQLFLEPEGLHT 306 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST++P ++Q F++TIPGLE +++R GYAIEYD I+P +L PTLE K I G Sbjct: 307 NEVYVQGMSTSMPMDVQLAFLKTIPGLEHAHVMRAGYAIEYDCIDPTQLKPTLEFKDIKG 366 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 F AGQ NGT+GYEEAAAQG++AGIN+A K + + R+++YIGV+IDDL +KG E Sbjct: 367 FFSAGQANGTSGYEEAAAQGIIAGINAAMFIQKREPLILKRSEAYIGVLIDDLVTKGTNE 426 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYR+ TSRAEYR+ LR DNAD RLTP G ++G + + R RF K ++ LLK Sbjct: 427 PYRIMTSRAEYRLLLRQDNADLRLTPYGRRVGLVKDDRWARFLKKKEDIEAAMKLLKE-- 484 Query: 483 LTSKNLSS-TSISFKQDG-----KTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 T+ N S T+ ++ G + + L + L P+ + + V R Sbjct: 485 -TNINPSQETNARLQEAGIEPIKSAQPLADLLRRQQVDYEKLRLAYPELPELAKEV--RQ 541 Query: 537 QIESS--YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 Q+E+S Y Y +Q+ + ++ E +L+P+D DY +P+L +E +EKL+ ++P ++ Q Sbjct: 542 QVETSILYEGYIKKQLEQVAHMEKLEAKLLPEDIDYQDVPSLRDEAREKLAAIRPRSVGQ 601 Query: 595 ASKIEGMTPAALNLLLIYIKK-----NTVKLNE 622 A +I G++PA +++LL+++++ +T K NE Sbjct: 602 AGRISGVSPADVSVLLVWLEQQKRLHDTAKQNE 634 >gi|115497106|ref|NP_001069537.1| protein MTO1 homolog, mitochondrial [Bos taurus] gi|94574214|gb|AAI16078.1| Mitochondrial translation optimization 1 homolog (S. cerevisiae) [Bos taurus] gi|296484283|gb|DAA26398.1| mitochondrial translation optimization 1 homolog [Bos taurus] Length = 692 Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust. Identities = 291/630 (46%), Positives = 408/630 (64%), Gaps = 25/630 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DV+VIGGGHAG EAAA AA+ G+ T L+TH+ TIG MSCNP+ GG+GKGHL+RE+DAL Sbjct: 37 FDVVVIGGGHAGTEAAAAAARCGSRTLLLTHRVDTIGQMSCNPSFGGIGKGHLMREVDAL 96 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGL R+ D +GI ++VLN +KGPAV G R Q DR+LY+ MQ+EIL+ L V +G V Sbjct: 97 DGLCSRICDQSGIHYKVLNRRKGPAVWGLRAQIDRKLYKQNMQKEILNTPLLTVQEGAVE 156 Query: 126 GF--------NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 +T K +S +V+ D S + +VVLTTGTFLRG+I IG PAGR+GD Sbjct: 157 DLILTEPEPEHTGKYRVSGVVLADGSKVYAESVVLTTGTFLRGMIVIGLEMHPAGRLGDQ 216 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR- 236 P+ L + K F GRLKTGTP R+ +++ + KQ D IPFSF+ + + Sbjct: 217 PAVGLAQTLEKLGFVVGRLKTGTPPRIAKESVNFSILNKQTPDNPSIPFSFINQTVWIKP 276 Query: 237 --QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 Q+ C +T TN I++EN+ H + + + GPRYCPSIE K++RF R HQ++ Sbjct: 277 EDQLPCYLTHTNPRVDEIVLENL-HLNCHVKET-TRGPRYCPSIESKVLRFPNRV-HQVW 333 Query: 295 LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT 354 LEPEG+++D++YP G+S LP E+Q + I I GLE +I+PGY ++YDY++P+++ P+ Sbjct: 334 LEPEGMDSDLIYPQGLSVTLPAELQEKMITCIRGLENAKMIQPGYGVQYDYMDPRQISPS 393 Query: 355 LETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDD 414 LET + LF AGQINGTTGYEEAAAQG++AGIN++ + SRT+ YIGV+IDD Sbjct: 394 LETHLVQRLFFAGQINGTTGYEEAAAQGVIAGINASLRVRHKPPFVISRTEGYIGVLIDD 453 Query: 415 LTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMK-LGCIGERRQKRFAKYIQEYNF 473 LT+ G EPYRMFTSRAE+R+SLRPDNAD+RLT G K GC+ ++R +R + Sbjct: 454 LTTLGTNEPYRMFTSRAEFRLSLRPDNADSRLTFRGYKEAGCVSQQRYERASWMKSSLEE 513 Query: 474 LRSLLKSLVLTS---KNL-SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA-RKF 528 S+LKS+ S KNL +SIS + R A + L Y + ++ L P+ +K+ Sbjct: 514 GISMLKSIEFLSTKWKNLIPESSISSGKSLPLR-ALDVLKYEEVDMELLARAVPEPLKKY 572 Query: 529 SSL--VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLP--ALSNELKEKL 584 + + ERL+IE++Y + Q E KE++ +E +PKD DY +L +LS E++EKL Sbjct: 573 TQCRELAERLKIEATYESVLFHQQQEIKEVQRDEALQLPKDLDYLTLKDISLSYEVREKL 632 Query: 585 SILKPFNLLQASKIEGMTPAALNLLLIYIK 614 +P + AS+I G+T AA+ LL ++K Sbjct: 633 HFSRPQTIGAASRIPGVTAAAIVNLLRFVK 662 >gi|329117673|ref|ZP_08246390.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus parauberis NCFD 2020] gi|326908078|gb|EGE54992.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus parauberis NCFD 2020] Length = 632 Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust. Identities = 270/617 (43%), Positives = 378/617 (61%), Gaps = 6/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAG EAA A+++G +T L T + M CNP+IGG KG +VREIDAL Sbjct: 9 YDVIVIGAGHAGVEAALAASRMGCNTLLATISLDMLAFMPCNPSIGGSAKGIVVREIDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + D IQ ++LN KGPAVR R QAD+ LY M+ + QENL + Q + Sbjct: 69 GGEMAKNIDKTYIQMKMLNTGKGPAVRALRAQADKNLYSREMKHTVEKQENLTLRQAIID 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + ++ +VV+TTGT LRG I +G+LK +G S +L ++ Sbjct: 129 DILVEDGQVVGVLTATKQKFSAKSVVVTTGTALRGEIILGELKYSSGPNNSLASVTLADN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 K + GR KTGTP R+ +I +D+TE Q D+ FSF++ + QI C +T Sbjct: 189 LKKLGLEIGRFKTGTPPRVKASSIDYDQTEIQPGDQAPNHFSFLSKDEDYLQDQIPCWLT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +H II +N+ + ++SG +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG +T+ Sbjct: 249 YTNSTSHDIINKNLYRAPMFSGIVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRDTE 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE++Q I +I GLE ++R GYAIEYD + P +L TLETK ISGL Sbjct: 309 EVYVQGLSTSLPEDVQKDLIHSIKGLENAEMMRTGYAIEYDIVLPHQLRATLETKLISGL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ NGT+GYEEAA QG+VAGIN+A K + R+D+YIGVMIDDL +KG LEP Sbjct: 369 FTAGQTNGTSGYEEAAGQGIVAGINAALKVQGKPELILKRSDAYIGVMIDDLVTKGTLEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFA-KYIQEYNFLRSL--LKS 480 YR+ TSRAEYR+ LR DNAD RLT IG ++G + + R F K Q N L+ L +K Sbjct: 429 YRLLTSRAEYRLILRHDNADMRLTEIGREIGLVDDIRWDNFQIKKNQFENELKRLDSIKL 488 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQIE 539 + N ++ FK TA EF+ P+ S Q S + P A + +I+ L+ E Sbjct: 489 KPIKETNEKVQALGFKPLTDAMTAKEFMRRPEISYQTAVSFVGPAAENLNPKIIDMLETE 548 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + ++K E++ IPK+ D+ ++ +++ E ++K + P + QAS+I Sbjct: 549 IKYEGYINKALDQVAKMKRMEEKRIPKNIDWDAIDSIATEARQKFKKINPETIGQASRIS 608 Query: 600 GMTPAALNLLLIYIKKN 616 G+ PA +++L++YI+ N Sbjct: 609 GVNPADISILMVYIEGN 625 >gi|323703264|ref|ZP_08114915.1| glucose inhibited division protein A [Desulfotomaculum nigrificans DSM 574] gi|323531729|gb|EGB21617.1| glucose inhibited division protein A [Desulfotomaculum nigrificans DSM 574] Length = 629 Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust. Identities = 267/625 (42%), Positives = 391/625 (62%), Gaps = 19/625 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEA AA++G T ++T + M CNPA+GG K HLV+EIDAL Sbjct: 8 YDVIVVGAGHAGCEAGLAAARMGCKTLVLTLNLDNVALMPCNPAVGGPAKSHLVKEIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG D IQ R+LN KGPAV R QAD+ Y+ M++ + SQ NLD+ Q V Sbjct: 68 GGQMGINTDLTAIQMRMLNTGKGPAVHALRAQADKLRYQQLMKKTLESQPNLDLKQLLVE 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + + + + V+LTTGT+L+G I IG + P G + +L + Sbjct: 128 EILVQNGQVRGVATNIGAEFSARAVILTTGTYLKGRIIIGSVYYPGGPNSQHAAMNLSEN 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + GR KTGTPAR+D +T+ + K Q DER+ FSF+ Q+ C +T T Sbjct: 188 LRSLGLELGRFKTGTPARIDRRTVDFSKMTIQPGDERVHNFSFLNPVKHRDQVPCWLTYT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 TH+II +N+ S +YSG I+ GPRYCPSIEDKIVRF ++ HQIF+EPEGL+T + Sbjct: 248 TERTHQIIRDNLHRSPLYSGIIEGVGPRYCPSIEDKIVRFADKPKHQIFIEPEGLSTFEM 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+ST+LP ++Q + +R+IPGLE+V I+RPGYAIEYDY+ P +L TLE K I GL+ Sbjct: 308 YVQGMSTSLPPDVQLEMLRSIPGLEQVEIMRPGYAIEYDYVVPTQLKSTLECKNIDGLYT 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGT+GYEEAAAQG++AGIN+A K + + SR ++YIGV+IDDL +KG EPYR Sbjct: 368 AGQINGTSGYEEAAAQGIMAGINAALKIKEKEPFTLSRAEAYIGVLIDDLVTKGTNEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRS---LLKSLV 482 + T+RAEYR+ LR DNAD+RLT G +G + E +R+ KY+++++ +++ L+S V Sbjct: 428 LMTARAEYRLLLRQDNADHRLTQKGYDIGLVTE---ERYRKYVEKWSAIKNEIDRLQSQV 484 Query: 483 LTS--------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIE 534 + + K+L S+ I+ + A + P+ +++L + D + + V+E Sbjct: 485 IPASEEVNNLLKDLGSSEIN-----QPVPAVNLIRRPEIHLRDLIKLNIDMPQLNDEVLE 539 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 ++IE Y Y +Q+ + + + E R + KD DY ++ LS E ++KL KP ++ Q Sbjct: 540 EVEIEIKYEGYIKKQLAQVERFEKLESRKLSKDIDYLNIKGLSVEARQKLDKFKPDSIGQ 599 Query: 595 ASKIEGMTPAALNLLLIYIKKNTVK 619 AS+I G++PA +++LL+++++ K Sbjct: 600 ASRISGVSPADISVLLVWLEQERRK 624 >gi|115442371|ref|NP_001045465.1| Os01g0960300 [Oryza sativa Japonica Group] gi|57900292|dbj|BAD87125.1| putative glucose inhibited division protein A [Oryza sativa Japonica Group] gi|113534996|dbj|BAF07379.1| Os01g0960300 [Oryza sativa Japonica Group] gi|222619912|gb|EEE56044.1| hypothetical protein OsJ_04841 [Oryza sativa Japonica Group] Length = 717 Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust. Identities = 267/622 (42%), Positives = 380/622 (61%), Gaps = 10/622 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + YDVIV+GGGHAGCEAA +A+LGA T L+T I CNPA+GG K LV E Sbjct: 64 LEERYDVIVVGGGHAGCEAALASARLGARTLLLTLNIDRIAWQPCNPAVGGPAKSQLVHE 123 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENL---D 118 +DAL G MG++AD +Q RVLN KGPAVR R Q D+ Y + M++ + S +NL + Sbjct: 124 VDALGGEMGKIADRCYLQKRVLNSSKGPAVRALRAQTDKREYAVEMKKVVESTQNLFIRE 183 Query: 119 VIQGEVA-GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 + EV G N + + D +VVLTTGTF+ G I +G+ +PAGR G+S Sbjct: 184 AMATEVMIGQNDNVEGVRTFFGMD---FYAPSVVLTTGTFMSGKIWVGRTSMPAGRAGES 240 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNR 236 S+ L + + F+T RLKTGTP R+D +T+ + E Q DE + FSF + I Sbjct: 241 ASHGLTENLQQLGFETDRLKTGTPPRIDRRTVNFSGLEPQHGDEEVGWFSFDPEFHIERD 300 Query: 237 QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLE 296 Q+ C +TRT ETH+I+ +N+ + Y G +++ GPRYCP+IEDKIVRF ++ HQ+FLE Sbjct: 301 QMCCYLTRTTKETHQIVRDNLDETPTYGGWVEAKGPRYCPAIEDKIVRFKDKESHQVFLE 360 Query: 297 PEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLE 356 PEG + +Y G ST LPE +Q +RT+PGLE ++RP YA+EYDY+ + +L Sbjct: 361 PEGRDVPELYLQGFSTGLPERLQLSLVRTLPGLENCVMLRPAYAVEYDYLPAYQCSRSLM 420 Query: 357 TKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 TKK GLF +GQINGTTGYEEAAAQG+++GIN+AR S+ I R SYIG +IDDL Sbjct: 421 TKKFEGLFFSGQINGTTGYEEAAAQGIISGINAARHSDGKPLIILERESSYIGTLIDDLV 480 Query: 417 SKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRS 476 +K + EPYRM TSR+E+R+ LR DNAD+RLTP+G +G I +RR + + + Sbjct: 481 TKDLREPYRMLTSRSEHRLLLRADNADSRLTPLGRDIGLIDDRRWELYQSKQARIKEEKE 540 Query: 477 LLKSLVLTSKNLSS--TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIE 534 LKS + ++ TS+S + ++ T L P + L S + E Sbjct: 541 RLKSTKIPGGEFAAAVTSVSNQPVKESSTLEAILKKPHVQYKLLDKHGYGNEHLSRIEKE 600 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 ++I+ Y + RQ + ++I +E + +P+D DY S+ LS E +EKLS ++P + Q Sbjct: 601 CVEIDIKYEGFIARQQSQLQQIVNQEHKKLPEDLDYHSMTNLSLEAREKLSKVRPQTIGQ 660 Query: 595 ASKIEGMTPAALNLLLIYIKKN 616 AS+I G++PA + +LLI+++ N Sbjct: 661 ASRIGGVSPADMTVLLIWMESN 682 >gi|160882058|ref|YP_001561026.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium phytofermentans ISDg] gi|189039336|sp|A9KLX8|MNMG_CLOPH RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|160430724|gb|ABX44287.1| glucose inhibited division protein A [Clostridium phytofermentans ISDg] Length = 627 Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust. Identities = 269/618 (43%), Positives = 382/618 (61%), Gaps = 9/618 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDV+V+G GHAGCEAA A+LG +T ++T I M CNP IGG KGHLVREIDA Sbjct: 7 AYDVVVVGAGHAGCEAALACARLGFNTIMLTVSMDNIALMPCNPNIGGTSKGHLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ ++LN KGPAV R QAD+ Y M++ + + +NL + Q EV Sbjct: 67 LGGEMGKNIDKTYIQSKMLNQSKGPAVHSLRAQADKMDYCREMRKVVENTDNLTLRQDEV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 TE N ++ + + + C V+L TG +L G+ G G +N L Sbjct: 127 IDILTENNEVTGVKVYSGGVYPCKVVILCTGVYLNARCIYGETSHYTGPNGLPSANHLTE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGI 242 S K + R KTGTPAR+D ++I + K E+QF DE+++PFSF+ + I QI C + Sbjct: 187 SLKKLGIEMYRFKTGTPARIDKRSIDFSKMEEQFGDEKVVPFSFINNPEDIEKEQISCWL 246 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II +NI S +YSG+IK GPRYCPSIEDK+V+F +++ HQ+F+EPEG T Sbjct: 247 TYTNENTHDIIRDNIHRSPLYSGNIKGTGPRYCPSIEDKVVKFPDKDRHQVFIEPEGNYT 306 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + +Y +G+S++LPE++Q + R++ GLE I+R YAIEYD INP +L +LE I+G Sbjct: 307 NEMYISGMSSSLPEDVQFKMYRSVSGLENAKIVRNAYAIEYDCINPMQLKSSLEFMSING 366 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF GQ NG++GYEEAAAQGL+AGIN+ARK + + I R+ +YIGV+IDDL +K E Sbjct: 367 LFSGGQFNGSSGYEEAAAQGLMAGINAARKLSGKEPIVLDRSQAYIGVLIDDLVTKETHE 426 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF---AKYIQEYNFLRSLLK 479 PYRM TSRAEYR+ LR DNAD RLT IG ++G I E R + + I+E + L Sbjct: 427 PYRMMTSRAEYRLILRQDNADQRLTRIGHEIGLISEDRYEHLIDKERMIKEE--MMRLEN 484 Query: 480 SLVLTSKNLSS--TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 SL+ SK + + T E + P+ + L + + VI +++ Sbjct: 485 SLIGASKEVQEILEGLGTTTLKTGTTLAELVRRPELTYAALAPLDKNREPLPEEVITQVE 544 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I Y Y RQ + ++ K E + IP+D DYS +P+L E K+KL+ +KP ++ QAS+ Sbjct: 545 INFKYDGYIKRQEHQVEQFKKLEGKKIPEDLDYSDVPSLRIEAKQKLNQIKPSSVGQASR 604 Query: 598 IEGMTPAALNLLLIYIKK 615 I G++PA +++LL+Y+++ Sbjct: 605 ISGVSPADISVLLVYLEQ 622 >gi|317013657|gb|ADU81093.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Helicobacter pylori Gambia94/24] Length = 621 Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust. Identities = 281/627 (44%), Positives = 374/627 (59%), Gaps = 16/627 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M+ S D++V+GGGHAG EA+ +AAK+GA LIT TIG SCNPAIGGLGKGHL + Sbjct: 1 MVKES-DILVVGGGHAGIEASLIAAKMGARVHLITMLIDTIGLASCNPAIGGLGKGHLTK 59 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+D L G MG + D +G+Q+RVLN KGPAVRG R Q D + YR+ + +L+ NL V Sbjct: 60 EVDVLGGAMGIITDHSGLQYRVLNASKGPAVRGTRAQIDMDTYRIFARNLVLNTPNLSVS 119 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q E + I + N+ R V++TTGTFL+GV+HIG+ + GR G++ SN Sbjct: 120 QEMTESLILENDEIVGVTTNINNTYRAKKVIITTGTFLKGVVHIGEHQNQNGRFGENASN 179 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 SL + + F RLKTGT R+ G +I ++ E+ F D FS+ T Q+ C Sbjct: 180 SLALNLRELGFKVERLKTGTCPRVAGNSIDFEGLEEHFGDTNPPYFSYKTKDFNPTQLSC 239 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN TH+II +N + ++SG I+ GPRYCPSIEDKI RF E+ HQ+FLEP+ + Sbjct: 240 FITYTNPITHQIIRDNFHRAPLFSGQIEGIGPRYCPSIEDKINRFSEKERHQLFLEPQTI 299 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + Y NG+ST+LP ++Q + I +I GLE I R GYAIEYD+I P EL LETKKI Sbjct: 300 HKSEYYINGLSTSLPLDVQEKVIHSIKGLENALITRYGYAIEYDFIQPTELTHALETKKI 359 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GL+LAGQINGTTGYEEAAAQGL+AGIN+ R ++YIGV+IDDL +KG Sbjct: 360 KGLYLAGQINGTTGYEEAAAQGLMAGINAVLALKNQAPFILKRNEAYIGVLIDDLVTKGT 419 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DN RL +LG + + K K QE LK Sbjct: 420 NEPYRMFTSRAEYRLLLREDNTLFRLGEHAYRLGLMEQDFYKELKKDKQEIQENLKRLKE 479 Query: 481 LVLTS--------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV 532 VLT L I+ K DG + L+ F+ + + S + V Sbjct: 480 CVLTPSKEVLKRLNELDENPINDKMDGVS-----LLARDSFNAEKMRSFFSFLAPLNERV 534 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 +E+++IE Y Y +Q ++ K IPK F + +P LS E EKL +P +L Sbjct: 535 LEQIKIECKYNIYIEKQHENIAKMDSMLKVSIPKHFVFKGIPGLSLEAVEKLEKFRPKSL 594 Query: 593 LQASKIEGMTPAALNLLLIYI--KKNT 617 +AS+I G+TPA L++L +YI +KN+ Sbjct: 595 FEASEISGITPANLDVLHLYIHLRKNS 621 >gi|282881765|ref|ZP_06290423.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Peptoniphilus lacrimalis 315-B] gi|281298375|gb|EFA90813.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Peptoniphilus lacrimalis 315-B] Length = 641 Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust. Identities = 272/621 (43%), Positives = 381/621 (61%), Gaps = 16/621 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YD IVIG GHAG EA AA++G T ++ + + +M+CNP +GG GKGHLVREIDA Sbjct: 18 DYDCIVIGAGHAGSEAGLAAARMGCKTLILCINLNAVANMACNPNVGGTGKGHLVREIDA 77 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D IQ R+LN KGPAV R QAD+ Y M+R + +QENLD+ + E Sbjct: 78 LGGEMAINIDKTFIQSRMLNTSKGPAVHSLRVQADKRKYHETMKRVLENQENLDLKEDEA 137 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E N + ++ ++ + + TVVL +GT+LRG +++G++ +G G P+N L Sbjct: 138 VRILKEDNKVCGVLTRNGARYKAKTVVLCSGTYLRGRVYMGEVNYSSGPTGFGPANELSK 197 Query: 185 SFMK-FDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNRQIE-CG 241 S + F RLKTGTPAR+ +I + E+Q DE+++PFSF DK N E C Sbjct: 198 SLEEDFSMKLMRLKTGTPARVLRSSIDFSCMEEQRGDEKIVPFSFKNYDKDMNIDQELCH 257 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T T + H+II +NI SA+ GDI GPRYCPSIEDK+ RF ++N HQ+F+EPEGL Sbjct: 258 LTYTTEKCHQIIRDNINRSALSLGDITGKGPRYCPSIEDKVTRFKDKNSHQVFIEPEGLT 317 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 TD +Y G+S++LP E+Q++F + I GL+ I+RP YAIEYD I+ L LE Sbjct: 318 TDEMYIQGVSSSLPVEVQNEFYKEIIGLKNCKILRPAYAIEYDAIDATLLKRNLEHMDYE 377 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQING++GYEEAA+QGLVAGIN+A K + R+ YIGV+IDDL +KG Sbjct: 378 GLFFAGQINGSSGYEEAASQGLVAGINAALKVQGKEPFIIDRSQGYIGVLIDDLVTKGTK 437 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF----AKYIQEYNFLRSL 477 EPYRM T+RAEYR++LR DNAD RLT IG LG + E R K+F +E +RS+ Sbjct: 438 EPYRMMTARAEYRLTLRQDNADLRLTQIGYDLGLVDEDRYKKFLYRKENIEKELERVRSI 497 Query: 478 LKSLVLTSKN----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVI 533 + + N L+ST + + T E L P+ + + L + D K +I Sbjct: 498 RINPTEENNNIIRKLNSTELK-----NSLTLAELLRRPELNYEKLADLDKDRPKLRKDII 552 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 + ++IE Y Y +Q I+ ++ K E R++ KD DY + L E +EKLS ++P ++ Sbjct: 553 DNVEIEIKYEGYIKKQEIQIRQYKKLENRVLSKDLDYKKIDGLRLEAREKLSDIRPESIG 612 Query: 594 QASKIEGMTPAALNLLLIYIK 614 QA +I G++PA +N+LLIY++ Sbjct: 613 QAGRITGVSPADINVLLIYLE 633 >gi|134096565|ref|YP_001101640.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Herminiimonas arsenicoxydans] Length = 601 Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust. Identities = 273/589 (46%), Positives = 368/589 (62%), Gaps = 14/589 (2%) Query: 44 MSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELY 103 MSCNP+IGG+GKGHLVRE+DA+ G M D AGIQFR+LN KGPAVR R QADR LY Sbjct: 1 MSCNPSIGGIGKGHLVREVDAMGGAMAIATDEAGIQFRILNSSKGPAVRATRAQADRILY 60 Query: 104 RLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIH 163 + A++ + +Q NL + Q V E + + V Q R VVLT GTFL G IH Sbjct: 61 KQAIRSRLENQPNLWLFQQGVDDLLVEGDRVVGAVTQAGIQFRARAVVLTAGTFLDGKIH 120 Query: 164 IGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERL 223 IG AGR GD P+ SL + GRLKTGTP R+DG++I + +Q D Sbjct: 121 IGMNNYSAGRAGDPPAISLSARLKELKLPQGRLKTGTPPRIDGRSIDFSVMTEQPGDLDP 180 Query: 224 IP-FSFMTD-KITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDK 281 IP FS M + +Q+ C IT TN +TH +I + S +Y+G I+ GPRYCPSIEDK Sbjct: 181 IPVFSVMGSVAMHPQQMPCWITHTNEKTHELIRGGLDRSPMYTGMIEGVGPRYCPSIEDK 240 Query: 282 IVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAI 341 I RF + HQIFLEPEGL T+ YPNGIST+LP ++Q ++++ GLE +I+RPGYAI Sbjct: 241 IHRFAGKESHQIFLEPEGLTTNEYYPNGISTSLPFDVQLALVQSMRGLEHAHILRPGYAI 300 Query: 342 EYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICF 401 EYDY +P+ L TLETK I GLF AGQINGTTGYEEAAAQG++AGIN+A + + D Sbjct: 301 EYDYFDPRGLKATLETKVIQGLFFAGQINGTTGYEEAAAQGMLAGINAALQIQERDAWTP 360 Query: 402 SRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQ 461 R ++Y+GV++DDL ++GVLEPYRMFTSRAEYR+SLR DNAD RLT +G +LGC+G+ + Sbjct: 361 RRDEAYLGVLVDDLITQGVLEPYRMFTSRAEYRLSLREDNADMRLTDVGRQLGCVGDVQW 420 Query: 462 KRF----AKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQN 517 F +E LRS S + ++ + + K + + L P+ + + Sbjct: 421 ALFETKREAVARELERLRSTWVSPRILAEA-EAERVLGKGIEREYALADLLRRPNVTYET 479 Query: 518 LFSI-CPDARKFSS------LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDY 570 L S+ D + V E+++I+ YA Y RQ E + E +P +FDY Sbjct: 480 LMSLKGMDGQDLGGPGVAEPAVREQVEIQLKYAGYIDRQAREVERHDHYENLKLPAEFDY 539 Query: 571 SSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 ++ LS E+++KL+ +P L QAS+I G+TPAA++L+L+++KK K Sbjct: 540 MAVKGLSIEVRQKLTKQRPETLGQASRISGVTPAAISLMLVHLKKGGFK 588 >gi|116074137|ref|ZP_01471399.1| glucose-inhibited division protein A [Synechococcus sp. RS9916] gi|116069442|gb|EAU75194.1| glucose-inhibited division protein A [Synechococcus sp. RS9916] Length = 659 Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust. Identities = 271/629 (43%), Positives = 375/629 (59%), Gaps = 20/629 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAGCEAA AA+LG +TAL T I CNPA+GG K LV E+DAL Sbjct: 11 FDVIVVGGGHAGCEAAITAARLGLNTALFTLNLDRIAWQPCNPAVGGPAKSQLVHEVDAL 70 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G++GR+ADA IQ R+LN +GPAV R Q D+ Y M + + NL + + V Sbjct: 71 GGVIGRLADATAIQKRILNASRGPAVWALRAQTDKRQYSRQMLQLLQHTPNLALREAMVT 130 Query: 126 GFNTEKNI----------------ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKI 169 G + + I+ + S+ VVLT GTFL G I +G + Sbjct: 131 GLEIDGDPSGGGEQWDPSQGPAARITGVRTYFGSVYGAKAVVLTAGTFLGGRIWVGHQSM 190 Query: 170 PAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSF- 228 AGR G+ + L + + F T RLKTGTPAR+D ++I D E+Q +D FSF Sbjct: 191 AAGRAGEQAAEGLTEALQQLGFQTDRLKTGTPARVDRRSIALDLLEEQPSDAADRFFSFD 250 Query: 229 MTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGER 288 + Q+ C ITRT TH++I +N+ +AIY G I S GPRYCPSIEDKIVRF ++ Sbjct: 251 PAAWASGEQMSCHITRTTAATHQLIRDNLHLTAIYGGVIDSKGPRYCPSIEDKIVRFADK 310 Query: 289 NGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINP 348 + HQIFLEPEG +T +Y G ST LPE IQ Q +R++PGLEK ++RP Y+++YDY+ Sbjct: 311 DSHQIFLEPEGRDTPEIYVQGFSTGLPEPIQLQLLRSLPGLEKAVMLRPAYSVDYDYLPA 370 Query: 349 KELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYI 408 +L P+LETK++ GLF AGQ+NGTTGYEEAAAQGLVAG+N+AR+ D + F R SYI Sbjct: 371 TQLLPSLETKRVEGLFSAGQLNGTTGYEEAAAQGLVAGLNAARRIRGQDAVHFPRQGSYI 430 Query: 409 GVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYI 468 G MIDDL SK + EPYR+ TSR+EYR+ LR DNAD RLTP+G +LG I +RR + F + + Sbjct: 431 GTMIDDLVSKDLREPYRVLTSRSEYRLVLRGDNADRRLTPLGRELGLIDDRRWQLFEEKL 490 Query: 469 QEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTR---TAYEFLSYPDFSIQNLFSICPDA 525 + L++ L + + ++ + + T + L P +L Sbjct: 491 SAMEAEKKRLETQRLKVSDPVAPAVEAETGAPIKGSITLADLLRRPGMHAADLVRHGLAD 550 Query: 526 RKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 V E +I+ Y+ Y RQ + ++K + +R +P+ DYS + LS E +EKLS Sbjct: 551 ADLPLQVREGAEIDIKYSGYLQRQQQQIDQVKRQGQRKLPETIDYSGIGTLSREAREKLS 610 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYIK 614 ++P L QAS+I G++ A L LL++++ Sbjct: 611 AVRPLTLGQASQIPGVSQADLTALLMWLE 639 >gi|134301152|ref|YP_001114648.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Desulfotomaculum reducens MI-1] gi|172044353|sp|A4J9S0|MNMG_DESRM RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|134053852|gb|ABO51823.1| glucose inhibited division protein A [Desulfotomaculum reducens MI-1] Length = 630 Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust. Identities = 271/623 (43%), Positives = 381/623 (61%), Gaps = 13/623 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVI++G GHAGCEA AA++G T ++T I M CNPA+GG K HLV+EIDAL Sbjct: 8 YDVIIVGAGHAGCEAGLAAARMGCKTLVLTLNLDNIALMPCNPAVGGPAKSHLVKEIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG D A IQ R+LN KGPAV R QAD+ Y+ M++ + +QENLDV Q V Sbjct: 68 GGQMGLTTDLAAIQMRMLNTGKGPAVYALRAQADKVKYQQLMKKNLETQENLDVKQLLVE 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + ++ + Q + VV+TTGT+L+G I IG + P G PS +L + Sbjct: 128 EILVKNGRVTGVATQIGAEFSARAVVVTTGTYLKGRIIIGNVHFPGGPNSQFPSVNLSEN 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + GR KTGTPAR+D +TI + K Q DE + FS+++ Q+ C +T T Sbjct: 188 LRSLGLELGRFKTGTPARVDRRTIDFTKMTIQPGDEEVHNFSYISPVTQREQVPCWLTYT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 +TH II EN+ S +YSG I+ GPRYCPSIEDKIVRF ++ HQIF+EPEGL+T + Sbjct: 248 TEKTHEIIRENLHRSPLYSGIIEGVGPRYCPSIEDKIVRFADKPQHQIFVEPEGLHTYEM 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+ST+LP ++Q + RTIPG+E V+I+RP YAIEYDYI P +L TLETK+I GL+ Sbjct: 308 YVQGMSTSLPPDVQLKMYRTIPGMENVSIMRPAYAIEYDYIVPTQLRTTLETKEIIGLYA 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGT+GYEEAAAQG++AGIN+A + + D SR+++YIGV+IDDL KG EPYR Sbjct: 368 AGQINGTSGYEEAAAQGIMAGINAALQVQEKDPFYLSRSEAYIGVLIDDLVVKGTNEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 + T+RAEYR+ LR DNAD+RLT G +G + + R + Q + LK++V+ + Sbjct: 428 LMTARAEYRLLLRQDNADHRLTQKGYNIGLVSQVRYDHYMNKWQSISKEMERLKTIVIPA 487 Query: 486 --------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 K+L S+ I+ + L P+ L + VIE ++ Sbjct: 488 NEETNKVLKSLESSEIT-----QNTPFINLLRRPEIKYNTLAGLSDHFLDLPQEVIEEVE 542 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 IE Y Y +Q+ + + + E R++ D DY + LS E ++KL KP ++ QAS+ Sbjct: 543 IEVKYEGYIKKQLAQVERFEKLEGRILNIDIDYEMIKGLSLEARQKLKKFKPTSIGQASR 602 Query: 598 IEGMTPAALNLLLIYIKKNTVKL 620 I G++PA +++LLI++++ K+ Sbjct: 603 ISGVSPADISVLLIWLEQERRKI 625 >gi|218189778|gb|EEC72205.1| hypothetical protein OsI_05293 [Oryza sativa Indica Group] Length = 717 Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust. Identities = 267/622 (42%), Positives = 380/622 (61%), Gaps = 10/622 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + YDVIV+GGGHAGCEAA +A+LGA T L+T I CNPA+GG K LV E Sbjct: 64 LEERYDVIVVGGGHAGCEAALASARLGARTLLLTLNIDRIAWQPCNPAVGGPAKSQLVHE 123 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENL---D 118 +DAL G MG++AD +Q RVLN KGPAVR R Q D+ Y + M++ + S +NL + Sbjct: 124 VDALGGEMGKIADRCYLQKRVLNSSKGPAVRALRAQTDKREYAVEMKKVVESTQNLFIRE 183 Query: 119 VIQGEVA-GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 + EV G N + + D +VVLTTGTF+ G I +G+ +PAGR G+S Sbjct: 184 AMATEVMIGQNDNVEGVRTFFGMD---FYAPSVVLTTGTFMSGKIWVGRTSMPAGRAGES 240 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNR 236 S+ L + + F+T RLKTGTP R+D +T+ + E Q DE + FSF + I Sbjct: 241 ASHGLTENLQQLGFETDRLKTGTPPRIDRRTVNFSGLEPQHGDEEVGWFSFDPEFHIERD 300 Query: 237 QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLE 296 Q+ C +TRT ETH+I+ +N+ + Y G +++ GPRYCP+IEDKIVRF ++ HQ+FLE Sbjct: 301 QMCCYLTRTTKETHQIVRDNLDETPTYGGWVEAKGPRYCPAIEDKIVRFKDKESHQVFLE 360 Query: 297 PEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLE 356 PEG + +Y G ST LPE +Q +RT+PGLE ++RP YA+EYDY+ + +L Sbjct: 361 PEGRDVPELYLQGFSTGLPERLQLSLVRTLPGLENCVMLRPAYAVEYDYLPAYQCSRSLM 420 Query: 357 TKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 TKK GLF +GQINGTTGYEEAAAQG+++GIN+AR S+ I R SYIG +IDDL Sbjct: 421 TKKFEGLFFSGQINGTTGYEEAAAQGIISGINAARHSDGKPLIILERESSYIGTLIDDLV 480 Query: 417 SKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRS 476 +K + EPYRM TSR+E+R+ LR DNAD+RLTP+G +G I +RR + + + Sbjct: 481 TKDLREPYRMLTSRSEHRLLLRADNADSRLTPLGRDIGLIDDRRWELYQSKQARIKEEKE 540 Query: 477 LLKSLVLTSKNLSS--TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIE 534 LKS + ++ TS+S + ++ T L P + L S + E Sbjct: 541 RLKSTKIPGGEFAAAVTSVSNQPVKESSTLEAILKKPHVQYKLLDKHGYGNEHLSRIEKE 600 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 ++I+ Y + RQ + ++I +E + +P+D DY S+ LS E +EKLS ++P + Q Sbjct: 601 CVEIDIKYEGFIARQQSQLQQIVNQEHKKLPEDLDYHSMTNLSLEAREKLSKVRPQTIGQ 660 Query: 595 ASKIEGMTPAALNLLLIYIKKN 616 AS+I G++PA + +LLI+++ N Sbjct: 661 ASRIGGVSPADMTVLLIWMESN 682 >gi|317180018|dbj|BAJ57804.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Helicobacter pylori F32] Length = 621 Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust. Identities = 282/627 (44%), Positives = 375/627 (59%), Gaps = 16/627 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M+ S D++VIGGGHAG EA+ +AAK+GA LIT TIG SCNPAIGGLGKGHL + Sbjct: 1 MVKES-DILVIGGGHAGIEASLIAAKMGARVHLITMLIDTIGLASCNPAIGGLGKGHLTK 59 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+D L G MG + D +G+Q+RVLN KGPAVRG R Q D + YR+ + +L+ NL V Sbjct: 60 EVDVLGGAMGIITDNSGLQYRVLNASKGPAVRGTRAQIDMDTYRIFARNLVLNTPNLSVS 119 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q E + + + N+ + V++TTGTFL+GV+HIG + GR G++ SN Sbjct: 120 QEMTESLIIENDEVVGVRTNINNTYKAKKVIITTGTFLKGVVHIGTHQNQNGRFGENASN 179 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 SL + + F RLKTGT R+ G +I ++ E+ F D FS+ T Q+ C Sbjct: 180 SLALNLRELGFKVERLKTGTCPRVAGNSIDFEGLEEHFGDTNPPYFSYKTKDFNPTQLSC 239 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN TH+II +N + ++SG I+ GPRYCPSIEDKI RF E+ HQ+FLEP+ + Sbjct: 240 FITYTNPITHQIIRDNFHRAPLFSGQIEGIGPRYCPSIEDKINRFSEKERHQLFLEPQTI 299 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + Y NG+ST+LP ++Q + I +I GLE I R GYAIEYD+I P EL TLETKKI Sbjct: 300 HKSEYYINGLSTSLPLDVQEKVIHSIKGLENALITRYGYAIEYDFIQPTELTHTLETKKI 359 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GL+LAGQINGTTGYEEAAAQGL+AGIN+ D R ++YI V+IDDL +KG Sbjct: 360 KGLYLAGQINGTTGYEEAAAQGLMAGINAVLALKNQDPFILKRNEAYIAVLIDDLVTKGT 419 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DN RL +LG + E + K QE LK Sbjct: 420 NEPYRMFTSRAEYRLLLREDNTLFRLGEHAYRLGLMEEDFYEGLKKDKQEIQDHLKRLKE 479 Query: 481 LVLTS--------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV 532 VLT L I+ K DG + L+ F+++ + S S V Sbjct: 480 CVLTPSKEVLKRLNELDENPINDKVDGVS-----LLARDSFNLEKMRSFFSFLTPLSERV 534 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 +E+++IE Y Y +Q ++ K IPK F + +P LS E EKL +P +L Sbjct: 535 LEQIKIECKYNIYIEKQHENIAKMDSMLKVSIPKGFVFKGIPGLSLEAVEKLEKFRPKSL 594 Query: 593 LQASKIEGMTPAALNLLLIYI--KKNT 617 +AS+I G+TPA L++L +YI +KN+ Sbjct: 595 FEASEISGITPANLDVLHLYIHLRKNS 621 >gi|126697203|ref|YP_001092089.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prochlorococcus marinus str. MIT 9301] gi|205375706|sp|A3PFG3|MNMG_PROM0 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|126544246|gb|ABO18488.1| Glucose inhibited division protein A [Prochlorococcus marinus str. MIT 9301] Length = 660 Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust. Identities = 275/634 (43%), Positives = 378/634 (59%), Gaps = 17/634 (2%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 N S+DVIVIGGGHAGCEAA AKLG STAL T I CNPA+GG K LV E+ Sbjct: 8 NESFDVIVIGGGHAGCEAAITTAKLGFSTALFTINLDRIAWQPCNPAVGGPAKSQLVHEV 67 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENL----- 117 DAL G++G++AD IQ R+LN +GPAV R Q D+ Y M + + +NL Sbjct: 68 DALGGIIGKLADETAIQKRILNASRGPAVWALRAQTDKREYSKKMIEILQNTDNLSLKEA 127 Query: 118 -----DVIQGEVAGFNTEKNI---ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKI 169 D+ + E G N+++ + I + S +V++T GTFL G I IG + Sbjct: 128 MITELDIAKTEEIGLNSKRTVKKRIKGVRTFFGSYYSARSVIITAGTFLEGRIWIGNKSM 187 Query: 170 PAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM 229 AGR G+ + L + + T RLKTGTPAR+D ++II+D + Q + FSF Sbjct: 188 SAGRSGEQAAKGLTENLHEIGIKTERLKTGTPARVDKRSIIFDDLDIQPSTAADKYFSFD 247 Query: 230 TDKITNR-QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGER 288 D N Q+ C ITRT +TH++I +N+ + IY G I S GPRYCPSIEDKIV+F ++ Sbjct: 248 PDIKNNMPQVSCHITRTTTKTHQLIRDNLHLTPIYGGFIDSKGPRYCPSIEDKIVKFADK 307 Query: 289 NGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINP 348 HQIFLEPEG+NT +Y G ST LPE IQ + +RT+PGL + ++RP YA+EYDYI Sbjct: 308 ESHQIFLEPEGINTPEIYVQGFSTGLPENIQLELLRTLPGLNECKMLRPAYAVEYDYIPA 367 Query: 349 KELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYI 408 +L +LETK+I LF AGQINGTTGYEEAAAQGLVAG+N+ RK +K D I F+R SYI Sbjct: 368 TQLQTSLETKEIEYLFSAGQINGTTGYEEAAAQGLVAGVNATRKLSKKDPIIFTRESSYI 427 Query: 409 GVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYI 468 G MI+DL +K + EPYR+ TSR+EYR++LR DNAD RLT +G ++G I E+R + + + Sbjct: 428 GTMINDLITKDLKEPYRVLTSRSEYRLTLRGDNADRRLTQLGYQIGLINEKRWSAYQEKM 487 Query: 469 QEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTR---TAYEFLSYPDFSIQNLFSICPDA 525 + + L L + S I + K + T E L PDF +L Sbjct: 488 KLLEEEKFRLNKTRLKNTEEISKKIELETGSKIKGSITLKELLKRPDFHYSDLIKYNLTE 547 Query: 526 RKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 + S + E ++I+ Y Y RQ ++I + + +P++ +Y + LS E +E L+ Sbjct: 548 KNLGSSIQEGVEIDIKYEGYLKRQKNNIEQINRQSCKSLPQEINYEKIETLSLEARENLN 607 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 +KP N ASKI G++ A L LL+++K +K Sbjct: 608 KIKPKNFGDASKIPGVSKADLTALLVWLKIREIK 641 >gi|294783016|ref|ZP_06748340.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Fusobacterium sp. 1_1_41FAA] gi|294479894|gb|EFG27671.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Fusobacterium sp. 1_1_41FAA] Length = 633 Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust. Identities = 273/630 (43%), Positives = 379/630 (60%), Gaps = 21/630 (3%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +D+IV+G GHAGCEAA +A++G TA+ T IG MSCNP++GG K HL REID Sbjct: 2 QEFDIIVVGAGHAGCEAALASARMGMKTAIFTISLDNIGVMSCNPSLGGPAKSHLAREID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G MGR D IQ RVLN KKGPAVR R QAD+ Y M++ + +NL VIQG Sbjct: 62 ALGGEMGRNIDKTFIQIRVLNTKKGPAVRSLRAQADKMTYANEMKKTLEHTDNLSVIQGM 121 Query: 124 VAGFNTEKN----IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 V+ E+ II I +++ R V++ TGTFLRG+IHIG++ AGRMG+ S Sbjct: 122 VSELVVEEEDGKKIIKGIKIREGLEYRAKIVIMATGTFLRGLIHIGEINFKAGRMGELSS 181 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFAD-ERLIPFSFMT---DKITN 235 L S K GR KTGTPAR+DG+TI + E+Q D +++ FS T + ++ Sbjct: 182 EELPLSLEKIGLKLGRFKTGTPARIDGRTIDFSVLEEQPGDTSQVLKFSNRTTDEEALSR 241 Query: 236 RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFL 295 RQI C I TN + H II + S +++G I+ GPRYCPSIEDK+ R+ ++ H +FL Sbjct: 242 RQIPCYIAHTNEKVHEIIKNARERSPMFNGRIQGLGPRYCPSIEDKVFRYPDKIQHHLFL 301 Query: 296 EPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTL 355 E EG T+ +Y G+S++LP ++Q + IR + G E ++R YAIEYDY+ P+E+ TL Sbjct: 302 EREGYETNEIYLGGMSSSLPVDVQEEMIRNVKGFENAKVMRYAYAIEYDYVPPEEIKYTL 361 Query: 356 ETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDL 415 E++ + LFLAGQINGT+GYEEA AQGL+AGIN+ RK + I R DSYIG +IDDL Sbjct: 362 ESRTVENLFLAGQINGTSGYEEAGAQGLMAGINAVRKLRNEEPIILDRADSYIGTLIDDL 421 Query: 416 TSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLR 475 SKG EPYRMFT+R+EYR+ LR DNAD RL+ +G +LG I E +R K ++ + Sbjct: 422 VSKGTNEPYRMFTARSEYRLYLREDNADLRLSKLGYELGLIPEEEYQRVEKKRRDVELIT 481 Query: 476 SLLKSLVLTSKNLSSTSISFK------QDGKTRTAYEFLSYPDFSIQNLFSICP-----D 524 +L + NL K +DG T E L P+ + +++ I D Sbjct: 482 EILTKTNVGPSNLRVNETLLKRGENPIKDGS--TLLELLRRPEVTFEDIVYISEEIKGVD 539 Query: 525 ARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKL 584 + + +++I Y Y R + ++ K E + IP D DY L + E K+KL Sbjct: 540 LKGYDHDTSYQVEITVKYQGYINRALKMIEKHKSMENKKIPADIDYDDLKTIPKEAKDKL 599 Query: 585 SILKPFNLLQASKIEGMTPAALNLLLIYIK 614 +KP N+ QAS+I G++PA + +LIY+K Sbjct: 600 KRIKPINIGQASRISGVSPADIQAILIYLK 629 >gi|119196609|ref|XP_001248908.1| hypothetical protein CIMG_02679 [Coccidioides immitis RS] Length = 694 Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust. Identities = 282/633 (44%), Positives = 384/633 (60%), Gaps = 23/633 (3%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R +DV+VIGGGHAG EA A AA+ GA TAL+T S IG SCNP+ GG+GKG ++REID Sbjct: 35 RPFDVVVIGGGHAGSEACAAAARSGARTALVTPSRSNIGVCSCNPSFGGIGKGTVIREID 94 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDG+ G++ D AGIQFRVLN KGPAV GPR Q DR+LY+ M E+ + L +++G+ Sbjct: 95 ALDGVAGKIVDKAGIQFRVLNRSKGPAVWGPRAQIDRDLYKKYMLEELSNYPGLSIVEGK 154 Query: 124 VAGFNTEKNIISS----------IVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGR 173 VA + + S + ++ +I VV+TTGTFL G IHIG P+GR Sbjct: 155 VADIVVSREDLGSTPGVKGKIVGVRLESGEVIPTGRVVITTGTFLGGEIHIGLEVFPSGR 214 Query: 174 MGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI 233 MG++ + L S + F GRLKTGTP RLD KTI + E Q D PFS++ D + Sbjct: 215 MGEAATFGLSKSLREAGFQLGRLKTGTPPRLDRKTIEFSALEVQPGDSPPSPFSYLNDTV 274 Query: 234 T---NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNG 290 Q+ C T TN H I+ N+ S +K GPRYCPS+E KI+RF ++ Sbjct: 275 DVGDEGQLTCWSTYTNENAHAIVKANLDKSVHIRETVK--GPRYCPSLESKILRFKDKPR 332 Query: 291 HQIFLEPEGLN-TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPK 349 H I+LEPEG DV+YPNGIS +P + Q++ +RTI GLE V +++PGY +EYDY++P+ Sbjct: 333 HMIWLEPEGFAPNDVIYPNGISMTIPADAQYEMLRTIQGLENVKMLQPGYGVEYDYVDPR 392 Query: 350 ELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIG 409 L TLETK ISGL+LAGQINGTTGYEEAA QG++AGIN+ S + SR+D +IG Sbjct: 393 SLKSTLETKLISGLYLAGQINGTTGYEEAAGQGILAGINAGLASQSKPPMTLSRSDGFIG 452 Query: 410 VMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQ 469 +M+DDL +KGV EPYRMFT+R+EYRIS R DNAD RLT +G G + ++R F+ Sbjct: 453 IMVDDLITKGVTEPYRMFTTRSEYRISTRADNADLRLTEMGRAAGVVTDKRWNHFSDTKY 512 Query: 470 EYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLF-------SIC 522 + L++LL++ S S D R+A+E L + I + I Sbjct: 513 QLLELQTLLENTKYPSTVWSRKGFRVHTDSSLRSAFELLCVNNADIDAIIPHITSPSGIS 572 Query: 523 PDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKE 582 + F + R+ IE +Y+ Y RQ A+ +E L+P D DYS + LS E + Sbjct: 573 YTSGSFDPKIKARVTIEGTYSPYIKRQANSARIFARDEALLLPPDLDYSKIHGLSTEERH 632 Query: 583 KLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 L ++P ++ A +IEG+TP LL++I+K Sbjct: 633 ALERVRPESVGMARRIEGVTPTGALRLLMHIRK 665 >gi|300814734|ref|ZP_07094982.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511121|gb|EFK38373.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 641 Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust. Identities = 271/621 (43%), Positives = 382/621 (61%), Gaps = 16/621 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YD IVIG GHAG EA AA++G T ++ + + +M+CNP +GG GKGHLVREIDA Sbjct: 18 DYDCIVIGAGHAGSEAGLAAARMGCKTLILCINLNAVANMACNPNVGGTGKGHLVREIDA 77 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D IQ R+LN KGPAV R QAD+ Y M+R + +QENLD+ + E Sbjct: 78 LGGEMAINIDKTFIQSRMLNTSKGPAVHSLRVQADKRKYHETMKRVLENQENLDLKEDEA 137 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E N + ++ ++ + + TVVL +GT+LRG +++G++ +G G P+N L Sbjct: 138 VRILKEDNKVCGVLTRNGARYKAKTVVLCSGTYLRGRVYMGEVNYSSGPTGFGPANELSK 197 Query: 185 SFMK-FDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNRQIE-CG 241 S + F RLKTGTPAR+ +I + E+Q DE+++PFSF DK N E C Sbjct: 198 SLEEDFSMKLMRLKTGTPARVLRSSIDFSCMEEQRGDEKIVPFSFKNYDKDMNIDQELCH 257 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T T + H+II +NI SA+ GDI GPRYCPSIEDK+ RF ++N HQ+F+EPEGL Sbjct: 258 LTYTTEKCHQIIRDNINRSALSLGDITGKGPRYCPSIEDKVTRFKDKNSHQVFIEPEGLT 317 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 TD +Y G+S++LP E+Q++F + I GL+ I+RP YAIEYD I+ L LE Sbjct: 318 TDEMYIQGVSSSLPVEVQNEFYKEIIGLKNCKILRPAYAIEYDAIDATLLKRNLEHMDYE 377 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQING++GYEEAA+QGLVAGIN+A K + R+ YIGV+IDDL +KG Sbjct: 378 GLFFAGQINGSSGYEEAASQGLVAGINAALKVQGKEPFIIDRSQGYIGVLIDDLVTKGTK 437 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF----AKYIQEYNFLRSL 477 EPYRM T+RAEYR++LR DNAD RLT IG LG + E R K++ +E + +RS+ Sbjct: 438 EPYRMMTARAEYRLTLRQDNADLRLTQIGYDLGLVDEDRYKKYLYRKENIEKELDRVRSI 497 Query: 478 LKSLVLTSKN----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVI 533 + + N L+ST + + T E L P+ + + L + D K +I Sbjct: 498 RINPTEENNNIIRKLNSTELK-----NSLTLTELLRRPELNYEKLADLDKDRPKLRKDII 552 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 + ++IE Y Y +Q I+ ++ K E R++ KD DY + L E +EKLS ++P ++ Sbjct: 553 DNVEIEIKYEGYIKKQEIQIRQYKKLENRVLSKDLDYKKIDGLRLEAREKLSDIRPESIG 612 Query: 594 QASKIEGMTPAALNLLLIYIK 614 QA +I G++PA +N+LLIY++ Sbjct: 613 QAGRITGVSPADINVLLIYLE 633 >gi|217032828|ref|ZP_03438308.1| hypothetical protein HPB128_176g6 [Helicobacter pylori B128] gi|298736843|ref|YP_003729373.1| glucose inhibited division protein A [Helicobacter pylori B8] gi|216945453|gb|EEC24115.1| hypothetical protein HPB128_176g6 [Helicobacter pylori B128] gi|298356037|emb|CBI66909.1| glucose inhibited division protein A [Helicobacter pylori B8] Length = 621 Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust. Identities = 281/627 (44%), Positives = 374/627 (59%), Gaps = 16/627 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M+ S D++VIGGGHAG EA+ +AAK+GA LIT TIG SCNPAIGGLGKGHL + Sbjct: 1 MVKES-DILVIGGGHAGIEASLIAAKMGARVHLITMLIDTIGLASCNPAIGGLGKGHLTK 59 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+D L G MG + D +G+Q+RVLN KGPAVRG R Q D + YR+ + +L+ NL V Sbjct: 60 EVDVLGGAMGIITDNSGLQYRVLNASKGPAVRGTRAQIDMDTYRIFARNLVLNTPNLSVS 119 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q E + + + N+ R V++TTGTFL+GV+HIG+ + GR G++ SN Sbjct: 120 QEMTESLILENDEVVGVTTNINNTYRAKKVIITTGTFLKGVVHIGEHQNQNGRFGENASN 179 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 SL + + F RLKTGT R+ G +I ++ E+ F D FS+ T Q+ C Sbjct: 180 SLALNLRELGFKVERLKTGTCPRVAGNSIDFEGLEEHFGDTNPPYFSYKTKDFNPTQLSC 239 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN TH+II +N + ++SG I+ GPRYCPSIEDKI RF E+ HQ+FLEP+ + Sbjct: 240 FITYTNPITHQIIRDNFHRAPLFSGQIEGIGPRYCPSIEDKINRFSEKERHQLFLEPQTI 299 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + Y NG+ST+LP ++Q + I +I GLE I R GYAIEYD+I P EL LETKKI Sbjct: 300 HKSEYYINGLSTSLPLDVQEKVIHSIKGLENALITRYGYAIEYDFIQPTELTHALETKKI 359 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GL+LAGQINGTTGYEEAAAQGL+AGIN+ R ++YIGV+IDDL +KG Sbjct: 360 KGLYLAGQINGTTGYEEAAAQGLMAGINAVLALKNQAPFILKRNEAYIGVLIDDLVTKGT 419 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DN RL +LG + + K K Q LK Sbjct: 420 NEPYRMFTSRAEYRLLLREDNTLFRLGEHAYRLGLMEQDFYKELKKDQQAIQENLKRLKE 479 Query: 481 LVLTS--------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV 532 VLT L I+ K DG + L+ F+ + + S + V Sbjct: 480 YVLTPSKEVLKRLSELDENPINDKVDGVS-----LLARDSFNAEKMRSFFSFLTPLNERV 534 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 +E+++IE Y Y +Q ++ K IPKDF + +P LS E EKL +P +L Sbjct: 535 LEQIKIECKYNIYIEKQHENIAKMDSMLKVSIPKDFVFKGIPGLSLEAVEKLEKFRPKSL 594 Query: 593 LQASKIEGMTPAALNLLLIYI--KKNT 617 +AS+I G+TPA L++L +YI +KN+ Sbjct: 595 FEASEISGITPANLDVLHLYIHLRKNS 621 >gi|154148722|ref|YP_001406290.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Campylobacter hominis ATCC BAA-381] gi|205831519|sp|A7I199|MNMG_CAMHC RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|153804731|gb|ABS51738.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA (Glucose-inhibited division protein A) [Campylobacter hominis ATCC BAA-381] Length = 640 Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust. Identities = 284/642 (44%), Positives = 380/642 (59%), Gaps = 40/642 (6%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IVIGGGHAG EA AA++GA T LIT IG+ SCNPAIGGL KGHLV+EIDAL Sbjct: 3 YDIIVIGGGHAGIEACLAAARMGAKTLLITILAEQIGAASCNPAIGGLAKGHLVKEIDAL 62 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG D AGIQFR LN KGPAVRG R Q D + YR+ M+ +L+ NL++ Q Sbjct: 63 GGQMGVCTDFAGIQFRTLNESKGPAVRGSRAQIDMDRYRIFMRNVLLNTSNLNISQEIAT 122 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 TE + I+ + ++ + +++TTGTFL G+IH+G+ K+ AGR+G+ PS L S Sbjct: 123 EILTENDQITGVKTHLGNVYETNRLIITTGTFLNGLIHVGENKLSAGRVGEFPSIRLSQS 182 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR--------- 236 GRLKTGT R+D KTI + E Q D + PFSF T N Sbjct: 183 LKNLGLKMGRLKTGTCPRVDAKTIDFSALELQNGDAQAHPFSFKTRFFANEIEKFTKNLS 242 Query: 237 ------------QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVR 284 QI C IT TN +TH II N + +++G I GPRYCPSIEDKI + Sbjct: 243 KNFDENGNFNPTQIPCYITYTNEKTHEIIRNNFDRAPLFTGQIHGIGPRYCPSIEDKINK 302 Query: 285 FGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYD 344 F +R+ H +F+EP+ Y NG+ST+LP ++Q +F+ ++ G E I+R GYAIEYD Sbjct: 303 FADRDRHHVFVEPQTAEASEYYLNGLSTSLPYDVQVEFLHSVKGFENAKIVRHGYAIEYD 362 Query: 345 YINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 ++ P EL +LETKKI+GL+LAGQINGTTGYEEAAAQGL+AGIN+A + R Sbjct: 363 FVEPTELKHSLETKKINGLYLAGQINGTTGYEEAAAQGLIAGINAALDIQNKAPLILRRD 422 Query: 405 DSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGE------ 458 ++YIGV+IDDL +KG EPYRMFTSRAE+R+ LR DNA RL+ G +G I + Sbjct: 423 EAYIGVLIDDLVTKGTKEPYRMFTSRAEFRLLLREDNAIFRLSGYGHDIGLIKDYEFDEI 482 Query: 459 -RRQKRFAKYIQEYNFLRSLL----KSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDF 513 RR+ + K I NFL + + K + K+L + +IS + T + + +F Sbjct: 483 SRRKAQIQKGI---NFLLNNVITPNKENLAKLKSLGADAIS-----QNTTWQKIVGGKNF 534 Query: 514 SIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSL 573 S + + I FS + + E Y Y Q E ++K IP + D+S + Sbjct: 535 SAEKIREIDSMFVDFSDDELSEILTECKYYFYIQMQKDEVAKMKNMLNTKIPTELDFSKI 594 Query: 574 PALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 LSNE+ EKL+ P L AS+I G+TPAA+++L IYIK+ Sbjct: 595 SGLSNEIIEKLNKFNPPTLFAASEISGVTPAAIDILHIYIKQ 636 >gi|325678157|ref|ZP_08157787.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ruminococcus albus 8] gi|324110162|gb|EGC04348.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ruminococcus albus 8] Length = 617 Score = 503 bits (1294), Expect = e-140, Method: Compositional matrix adjust. Identities = 269/621 (43%), Positives = 372/621 (59%), Gaps = 19/621 (3%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++D+IVIG GHAGCEAA A+LG TAL T + +M CNP+IGG KGHLVREIDA Sbjct: 3 NFDIIVIGAGHAGCEAALAGARLGLKTALFTITLDGLANMPCNPSIGGTAKGHLVREIDA 62 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR AD IQ R+LN KGPAV R Q DR Y M++ I + L + Q E+ Sbjct: 63 LGGEMGRAADKTLIQSRMLNRGKGPAVHSLRAQIDRVAYHNLMKKTIEGTDGLYLKQAEI 122 Query: 125 AG--FNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 F + + + C V++ +GT+L G IH+G P+G P+ L Sbjct: 123 TDLLFEEDGRTVRGVRTHLGVEYGCRAVIIASGTYLNGEIHVGVNTYPSGPDSVLPARKL 182 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGI 242 +S + R KTGTPAR+ ++I +DK E Q DE + PFSF + + +++C + Sbjct: 183 SDSLKEAGMTLRRFKTGTPARVHRRSIDFDKLEVQHGDEDIQPFSFTNEVLPENKVDCYV 242 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 TN ETH++IM+NI S IYSG I + GPRYCPSIEDKI+RF ++ HQ+F+EP GL+T Sbjct: 243 AYTNAETHKVIMDNIHLSPIYSGRIHAIGPRYCPSIEDKIMRFSDKPRHQLFIEPMGLDT 302 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 D Y G+S++LP ++Q +F+RTI GLE V I+R YAIEYD +P +L PTLE K+ G Sbjct: 303 DEFYLQGMSSSLPVDVQLKFLRTIEGLEHVEIMRNAYAIEYDCCDPTDLLPTLEFKEFHG 362 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 ++ AGQ NGT+GYEEAAAQGLVAGIN+A K + R SYIG +IDDL +KGV + Sbjct: 363 VYGAGQFNGTSGYEEAAAQGLVAGINAALKLKGEKPMVLDRASSYIGTLIDDLCTKGVSD 422 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFA----------KYIQEYN 472 PYRM TSR+EYR+ LR DNAD RLT G ++G IG+ R F K + N Sbjct: 423 PYRMLTSRSEYRLLLRQDNADLRLTETGHRVGLIGDERYNAFVKKKEQIDAEIKRVSAIN 482 Query: 473 FLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV 532 S + + L S+ + FK + + P S + L I P+ + V Sbjct: 483 IAPSEVLNEYLVSQGTDPINNGFK-------LTQLIRRPQLSYKGLAFIDPERPELPEDV 535 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 E++++ Y Y Q+ + + ++ E +LIP D DYS + +L E EKL+ ++P ++ Sbjct: 536 CEQVELMIKYEGYIKIQLEQVEAMRKLESKLIPADIDYSKIGSLRLEAAEKLAKIRPLSV 595 Query: 593 LQASKIEGMTPAALNLLLIYI 613 QAS+I G+ PA +N+LL+Y+ Sbjct: 596 GQASRISGVNPADINVLLVYL 616 >gi|125719133|ref|YP_001036266.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus sanguinis SK36] gi|166200625|sp|A3CRB1|MNMG_STRSV RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|125499050|gb|ABN45716.1| Glucose inhibited division protein A, putative [Streptococcus sanguinis SK36] Length = 635 Score = 503 bits (1294), Expect = e-140, Method: Compositional matrix adjust. Identities = 264/626 (42%), Positives = 382/626 (61%), Gaps = 26/626 (4%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYD+IVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DA Sbjct: 8 SYDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M + D + IQ ++LN KGPAVR R QAD+ELY M++ + +QENL + Q Sbjct: 68 LGGEMAKNIDKSYIQMKMLNTGKGPAVRALRAQADKELYSKEMRKTVENQENLTLRQ--- 124 Query: 125 AGFNTEKNIISSIVMQDNSMIRCST----------VVLTTGTFLRGVIHIGKLKIPAGRM 174 +I+ I+++D +I T V++TTGT LRG I IG LK +G Sbjct: 125 -------TMINEILVEDGKVIGVKTATHQEYAAKAVIVTTGTALRGEIIIGDLKYSSGPN 177 Query: 175 GDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DK 232 + L ++ F+ GR KTGTP R+ +I +D TE Q DE+ FS+ + + Sbjct: 178 HSLAAIPLADNLRDLGFEIGRFKTGTPPRVKASSINYDVTEIQPGDEKANHFSYTSRDED 237 Query: 233 ITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQ 292 Q+ C +T TN E+H II N+ + ++SG +K GPRYCPSIEDKIVRF ++ HQ Sbjct: 238 YVKDQVPCWLTYTNAESHEIIQNNLHRAPMFSGIVKGVGPRYCPSIEDKIVRFADKERHQ 297 Query: 293 IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF 352 +FLEPEG +T+ VY G+ST+LPE++Q + +I GLE ++R GYAIEYD I P +L Sbjct: 298 LFLEPEGRDTEEVYVQGLSTSLPEDVQKDLVHSIKGLENAEMMRTGYAIEYDMIMPHQLR 357 Query: 353 PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMI 412 TLETKKISGLF AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMI Sbjct: 358 ATLETKKISGLFTAGQTNGTSGYEEAAGQGIIAGINAALKIQGKQELILKRSDGYIGVMI 417 Query: 413 DDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYN 472 DDL +KG +EPYR+ TSRAEYR+ LR DNAD RLT +G ++G + + R RF +++ Sbjct: 418 DDLVTKGTVEPYRLLTSRAEYRLILRHDNADMRLTEMGREIGLVDDERWARFEIKKNQFD 477 Query: 473 FLRSLLKSLVL---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKF 528 L+S+ L N ++ FK TA EF+ P+ S Q++ I P A + Sbjct: 478 NEMKRLESIKLKPVKETNAKVEALGFKPLTDAVTAKEFMRRPEVSYQDVVQFIGPAAEEL 537 Query: 529 SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 +IE ++ E Y Y + + + +++K E++ IP + D+ + +++ E ++K + Sbjct: 538 DEKIIELIETEIKYEGYISKALDQVEKMKRMEEKRIPANIDWDDIDSIATEARQKFKKIN 597 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIK 614 P + QAS+I G+ PA +++L++Y++ Sbjct: 598 PETIGQASRISGVNPADISILMVYLE 623 >gi|332665150|ref|YP_004447938.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Haliscomenobacter hydrossis DSM 1100] gi|332333964|gb|AEE51065.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Haliscomenobacter hydrossis DSM 1100] Length = 621 Score = 503 bits (1294), Expect = e-140, Method: Compositional matrix adjust. Identities = 269/626 (42%), Positives = 381/626 (60%), Gaps = 25/626 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAA AA LG+ L+T TI MSCNPA+GG+ KG +VREIDAL Sbjct: 5 YDVIVVGAGHAGCEAAVAAANLGSKVCLVTMNMQTIAQMSCNPAMGGVAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G G V D +QFR+LN KGPA+ PR Q+DR L+ + + N+D Q V Sbjct: 65 GGYSGIVTDHTMVQFRMLNRSKGPAMWSPRAQSDRMLFARKWRNMLEEHPNVDFWQDMVK 124 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 G ++ +V I VVLT GTFL G+IHIG+ ++ GR G+S + + Sbjct: 125 GLVIRGGVVRGVVTSMGLEIPGKAVVLTNGTFLNGIIHIGEKQLGGGRAGESAAKGITEQ 184 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 ++ F+ GR+KTGTP R+DG+T+ +D E Q DE FS+ +Q+ C +T T Sbjct: 185 LVELGFEAGRMKTGTPPRVDGRTLNYDAMEVQPGDENPGKFSYTDTPPITKQLPCHVTYT 244 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 + + H + S +++G I+ GPRYCPSIEDKI RF +++ HQ+F+EPEG +T + Sbjct: 245 STQVHETLKTGFDRSPMFNGRIQGLGPRYCPSIEDKINRFADKDRHQLFVEPEGWDTCEI 304 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG S++LPE++Q++ +R IPG E V + RPGYAIEYDY P +L TLET+ + LF Sbjct: 305 YVNGFSSSLPEDVQYKALRLIPGFENVKMFRPGYAIEYDYFPPTQLEMTLETRLVKNLFF 364 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAA QG++AG N+ N+ + + R++ YIGV+IDDL +KG EPYR Sbjct: 365 AGQINGTTGYEEAACQGMMAGFNAHLAINEQEPLIIKRSEGYIGVLIDDLVNKGTQEPYR 424 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIG-----ERRQ------KRFAKYIQEYNFL 474 MFTSRAEYRI LR DNAD RLTP+ +LG G ER Q K ++++EY+ Sbjct: 425 MFTSRAEYRILLRQDNADLRLTPLAHQLGVRGMEERMERVQVKEASAKAIERFLEEYSIA 484 Query: 475 RSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF----SS 530 + L SK S+T +Q K T L P+ ++ +L + PD +F + Sbjct: 485 PEQINQY-LESKESSAT----RQKVKLST---ILLRPNINLDDLREVVPDLHQFLQAHTQ 536 Query: 531 LVIERLQIESSYAAYTGR-QMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 +E +I Y Y + Q + K + EE +L DY +LP+LS E +EKL+ ++P Sbjct: 537 ECVELAEINMKYEGYIRKEQELVNKMNRLEEVKLW-DTLDYHALPSLSKEAREKLTRMRP 595 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKK 615 + QAS+I G++P+ +++LL+++ + Sbjct: 596 RTIGQASRISGISPSDISVLLVHMGR 621 >gi|19882217|ref|NP_598400.1| protein MTO1 homolog, mitochondrial isoform b [Homo sapiens] gi|20981712|sp|Q9Y2Z2|MTO1_HUMAN RecName: Full=Protein MTO1 homolog, mitochondrial; Flags: Precursor gi|19335739|gb|AAL85490.1| MTO1 protein isoform III [Homo sapiens] gi|19335741|gb|AAL85491.1| MTO1 protein isoform IV [Homo sapiens] gi|55961490|emb|CAI14881.1| mitochondrial translation optimization 1 homolog (S. cerevisiae) [Homo sapiens] gi|119569148|gb|EAW48763.1| mitochondrial translation optimization 1 homolog (S. cerevisiae), isoform CRA_d [Homo sapiens] Length = 717 Score = 503 bits (1294), Expect = e-140, Method: Compositional matrix adjust. Identities = 285/655 (43%), Positives = 406/655 (61%), Gaps = 50/655 (7%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA+ G+ T L+TH+ TIG MSCNP+ GG+GKGHL+RE+DAL Sbjct: 37 FDVIVIGGGHAGTEAATAAARCGSRTLLLTHRVDTIGQMSCNPSFGGIGKGHLMREVDAL 96 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGL R+ D +G+ ++VLN +KGPAV G R Q DR+LY+ MQ+EIL+ L V +G V Sbjct: 97 DGLCSRICDQSGVHYKVLNRRKGPAVWGLRAQIDRKLYKQNMQKEILNTPLLTVQEGAVE 156 Query: 126 GF--------NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 +T K +S +V+ D S + +V+LTTGTFLRG+I IG PAGR+GD Sbjct: 157 DLILTEPEPEHTGKCRVSGVVLVDGSTVYAESVILTTGTFLRGMIVIGLETHPAGRLGDQ 216 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR- 236 PS L + K F GRLKTGTP R+ ++I + K D IPFSF + + + Sbjct: 217 PSIGLAQTLEKLGFVVGRLKTGTPPRIAKESINFSILNKHIPDNPSIPFSFTNETVWIKP 276 Query: 237 --QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 Q+ C +T TN I+++N+ ++ + GPRYCPSIE K++RF R HQ++ Sbjct: 277 EDQLPCYLTHTNPRVDEIVLKNLHLNSHVKETTR--GPRYCPSIESKVLRFPNRL-HQVW 333 Query: 295 LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRP----------------- 337 LEPEG+++D++YP G+S LP E+Q + I I GLEK +I+P Sbjct: 334 LEPEGMDSDLIYPQGLSMTLPAELQEKMITCIRGLEKAKVIQPDGVLLLLPRMECNGAIS 393 Query: 338 --------GYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINS 389 GY ++YDY++P+++ P+LET + LF AGQINGTTGYEEAAAQG++AGIN+ Sbjct: 394 AHHNLPLPGYGVQYDYLDPRQITPSLETHLVQRLFFAGQINGTTGYEEAAAQGVIAGINA 453 Query: 390 ARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPI 449 + + ++ SRT+ YIGV+IDDLT+ G EPYRMFTSR E+R+SLRPDNAD+RLT Sbjct: 454 SLRVSRKPPFVVSRTEGYIGVLIDDLTTLGTSEPYRMFTSRVEFRLSLRPDNADSRLTLR 513 Query: 450 GMK-LGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS----KNLSSTSISFKQDGKTRTA 504 G K GC+ ++R +R S+LKS+ S K + SIS + R A Sbjct: 514 GYKDAGCVSQQRYERACWMKSSLEEGISVLKSIEFLSSKWKKLIPEASISTSRSLPVR-A 572 Query: 505 YEFLSYPDFSIQNLFSICPDA-RKFSSL--VIERLQIESSYAAYTGRQMIEAKEIKFEEK 561 + L Y + + +L P+ +K++ + ERL+IE++Y + Q+ E K ++ +E Sbjct: 573 LDVLKYEEVDMDSLAKAVPEPLKKYTKCRELAERLKIEATYESVLFHQLQEIKGVQQDEA 632 Query: 562 RLIPKDFDYSSLP--ALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIK 614 +PKD DY ++ +LS+E++EKL +P + AS+I G+TPAA+ LL ++K Sbjct: 633 LQLPKDLDYLTIRDVSLSHEVREKLHFSRPQTIGAASRIPGVTPAAIINLLRFVK 687 >gi|315586210|gb|ADU40591.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Helicobacter pylori 35A] Length = 621 Score = 503 bits (1294), Expect = e-140, Method: Compositional matrix adjust. Identities = 281/627 (44%), Positives = 374/627 (59%), Gaps = 16/627 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M+ S D++VIGGGHAG EA+ +AAK+G LIT TIG SCNPAIGGLGKGHL + Sbjct: 1 MVKES-DILVIGGGHAGIEASLIAAKMGVRVHLITMLIDTIGLASCNPAIGGLGKGHLTK 59 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+D L G MG + D +G+Q+RVLN KGPAVRG R Q D + YR+ + +L+ NL V Sbjct: 60 EVDVLGGAMGIITDNSGLQYRVLNASKGPAVRGTRAQIDMDTYRIFARNLVLNTPNLSVS 119 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q E + + + N+ + V++TTGTFL+GV+HIG + GR G++ SN Sbjct: 120 QEMTESLIIENDEVVGVTTNINNTYKAKKVIITTGTFLKGVVHIGTHQNQNGRFGENASN 179 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 SL + F RLKTGT R+ G +I ++ E+ F D FS+ T Q+ C Sbjct: 180 SLALNLRDLGFKVERLKTGTCPRVAGNSIDFEGLEEHFGDTNPPYFSYKTKDFNPTQLSC 239 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN TH+II +N + ++SG I+ GPRYCPSIEDKI RF E+ HQ+FLEP+ + Sbjct: 240 FITYTNPITHQIIRDNFHRAPLFSGQIEGIGPRYCPSIEDKINRFSEKERHQLFLEPQTI 299 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + Y NG+ST+LP ++Q + I +I GLE I R GYAIEYD+I P EL TLETKKI Sbjct: 300 HKSEYYINGLSTSLPLDVQEKVIHSIKGLENALITRYGYAIEYDFIQPTELTHTLETKKI 359 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GL+LAGQINGTTGYEEAAAQGL+AGIN+ D R ++YIGV+IDDL +KG Sbjct: 360 KGLYLAGQINGTTGYEEAAAQGLMAGINAVLALKNQDPFILKRNEAYIGVLIDDLVTKGT 419 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DN RL +LG + E + K QE LK Sbjct: 420 NEPYRMFTSRAEYRLLLREDNTLFRLGEHAYRLGLMEEDFYEGLKKDQQEIQDHLKRLKE 479 Query: 481 LVLTS--------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV 532 VLT L I+ K DG + L+ F+++ + S + V Sbjct: 480 CVLTPSKEVLKRLNELDENPINDKVDGVS-----LLARDSFNLEKMRSFFSFLTPLNERV 534 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 +E+++IE Y Y +Q ++ K IPK F + +P LS E EKL +P +L Sbjct: 535 LEQIKIECKYNIYIEKQHENIAKMDSMLKVSIPKGFVFKGIPGLSLEAVEKLEKFRPKSL 594 Query: 593 LQASKIEGMTPAALNLLLIYI--KKNT 617 +AS+I G+TPA L++L +YI +KN+ Sbjct: 595 FEASEISGITPANLDVLHLYIHLRKNS 621 >gi|315638920|ref|ZP_07894092.1| glucose inhibited division protein A [Campylobacter upsaliensis JV21] gi|315481138|gb|EFU71770.1| glucose inhibited division protein A [Campylobacter upsaliensis JV21] Length = 616 Score = 503 bits (1294), Expect = e-140, Method: Compositional matrix adjust. Identities = 277/618 (44%), Positives = 376/618 (60%), Gaps = 15/618 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IVIGGGHAG EA+A AAK+G T L+T IG+ SCNPAIGGL KGHLV+E+DA+ Sbjct: 2 YDIIVIGGGHAGIEASAAAAKMGKKTLLLTTLIEQIGAASCNPAIGGLAKGHLVKELDAM 61 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLMG + D AGIQFR+LN KG AVRG R Q D + YR+ + ++L +NL++ Q +V Sbjct: 62 GGLMGEITDEAGIQFRILNESKGVAVRGSRAQIDMDRYRIIARNKLLQLKNLEISQEQVI 121 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + + I + N ++LTTGTFL G+IHIG+ +I AGR+G+ S L NS Sbjct: 122 ELIFKNDEIKGVRTNLNHNYYAKKLILTTGTFLNGLIHIGENQIEAGRVGEMASIKLGNS 181 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 K D GRLKTGT R+D K+I + E Q D PFSF T + Q+ C I RT Sbjct: 182 LRKLDLKIGRLKTGTCPRVDAKSIDFSVLEIQHGDVEPKPFSFRTKDFSPTQLPCFIART 241 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 NL TH+II +N + +++G I+ GPRYCPSIEDKI RF ++ H +F+EP+ Sbjct: 242 NLNTHQIIKDNFYRAPLFTGQIEGVGPRYCPSIEDKINRFSDKESHHLFIEPQTKEASEY 301 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG ST+LP E+Q Q +++I G E I R GYAIEYDYI+P EL+ +LE KKI L+ Sbjct: 302 YINGFSTSLPYEVQTQMLKSIKGFENAKITRFGYAIEYDYIDPTELYHSLELKKIKNLYC 361 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAAAQG + GIN+A + R ++YIGV+IDDL KG EPYR Sbjct: 362 AGQINGTTGYEEAAAQGFMTGINAALALEDKEPFILRRDEAYIGVLIDDLVMKGTKEPYR 421 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQE----YNFLRSLLKSL 481 MFTSRAE+R+ LR +NA RL G K G + E+ + K + NFL L K L Sbjct: 422 MFTSRAEFRLLLREENAIIRLGKYGFKFGLLSEKEFQMIEKSRENIERGLNFL--LTKEL 479 Query: 482 VLTSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 +++N + K+ G+ + + + ++ F + L + + ++ + Sbjct: 480 TPSNEN----NAFLKELGEEKITSIVSLQKVVARASFDVGKLRKLDSFFENMDAYSLQEI 535 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 E+ Y Y Q + +++K IP DFD+ ++ LSNE+ EKL +P L AS Sbjct: 536 LSEAKYYHYITMQKAQVEKMKDLSSLKIPVDFDFKNVSGLSNEVVEKLEKFRPPTLFAAS 595 Query: 597 KIEGMTPAALNLLLIYIK 614 +I G+TPAAL++L IYIK Sbjct: 596 EISGITPAALDILHIYIK 613 >gi|126655030|ref|ZP_01726469.1| glucose-inhibited division protein A [Cyanothece sp. CCY0110] gi|126622509|gb|EAZ93214.1| glucose-inhibited division protein A [Cyanothece sp. CCY0110] Length = 634 Score = 503 bits (1294), Expect = e-140, Method: Compositional matrix adjust. Identities = 265/617 (42%), Positives = 371/617 (60%), Gaps = 9/617 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 S+D+IV+G GH+GCEAA AA+LG T ++T I CNPA+GG K L E+DA Sbjct: 12 SFDIIVVGAGHSGCEAALAAARLGCRTLMLTLNLDRIAWQPCNPAVGGPAKSQLTHEVDA 71 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G +G++AD +Q RVLN +GPAV R Q D+ Y M+ + +QENL + +G V Sbjct: 72 LGGEIGKMADRTYLQKRVLNSSRGPAVWALRAQTDKREYSAVMKEIVENQENLSIREGMV 131 Query: 125 AGFNTEKNI-ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 KN + I + + V+LTTGTFL G I IG + AGR G+ + L Sbjct: 132 TDLVLGKNDEVIGIQTYFGTCFQAKAVILTTGTFLGGRIWIGNKSMEAGRAGEFAAVGLT 191 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 ++ F+TGRLKTGTPAR+D +++ + K E Q DE + FSF + + Q+ C + Sbjct: 192 DTLNDLGFETGRLKTGTPARVDKRSVDYSKLEPQPPDEEVRWFSFDPEVWVEKEQMNCYL 251 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 TRT +TH++I +N+ S IY G I S GPRYCPSIEDKIVRF ++ HQIF+EPEG Sbjct: 252 TRTTTKTHQLIKDNLHLSPIYGGFIDSKGPRYCPSIEDKIVRFADKESHQIFIEPEGREI 311 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +Y G ST LPE IQ +RT+PGLE ++RP YA+EYDY+ + +PTL TKKI G Sbjct: 312 PELYIQGFSTGLPENIQLAMLRTLPGLENCVMLRPAYAVEYDYLPATQCYPTLMTKKIQG 371 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQ+NGTTGYEEAAAQG+VAGIN+ + + I F R +SY+G ++DDL +K + E Sbjct: 372 LFCAGQVNGTTGYEEAAAQGIVAGINAVKFVKNEEMIIFPREESYLGTLVDDLCTKDLRE 431 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRM TSR+EYR+ LR DNAD R+TP+G ++G I +RR F ++ N + + Sbjct: 432 PYRMLTSRSEYRLILRSDNADQRMTPLGREIGLIDDRRWALFEH--KQANIVAEKERLYE 489 Query: 483 LTSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 K +I D + + T + L P F Q+L + + + E + Sbjct: 490 TRIKERDEVAIKIVNDTQQKIKGSATLADLLRRPKFHYQHLEKYGLGNQNLTIVEKEGAE 549 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ Y+ Y RQ I+ +I + +P D DY ++ LS E +EKL+ ++P L QAS+ Sbjct: 550 IDIKYSGYLKRQQIQIDQITRHSNKKLPSDLDYMAIDTLSMEAREKLTKVRPLTLGQASR 609 Query: 598 IEGMTPAALNLLLIYIK 614 I G+ PA +N LL+Y++ Sbjct: 610 IGGVNPADINALLVYLE 626 >gi|281182426|ref|NP_001162543.1| protein MTO1 homolog, mitochondrial [Papio anubis] gi|163781002|gb|ABY40783.1| mitochondrial translation optimization 1 homolog, isoform 1 (predicted) [Papio anubis] Length = 717 Score = 503 bits (1294), Expect = e-140, Method: Compositional matrix adjust. Identities = 287/655 (43%), Positives = 407/655 (62%), Gaps = 50/655 (7%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA+ G+ T L+TH+ TIG MSCNP+ GG+GKGHL+RE+DAL Sbjct: 37 FDVIVIGGGHAGTEAATAAARCGSRTLLLTHRVDTIGQMSCNPSFGGIGKGHLMREVDAL 96 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGL R+ D +G+ ++VLN +KGPAV G R Q DR+LY+ MQ+EIL+ L V +G V Sbjct: 97 DGLCSRICDQSGVHYKVLNRRKGPAVWGLRAQIDRKLYKQNMQKEILNTPLLTVQEGAVE 156 Query: 126 GF--------NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 +T K +S +V+ D S + +V+LTTGTFLRG+I IG PAGR+GD Sbjct: 157 DLILTEPEPEHTGKCRVSGVVLVDGSTVYAESVILTTGTFLRGMIVIGLEMHPAGRLGDQ 216 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR- 236 PS L + K F GRLKTGTP R+ +I + KQ D +PFSF + + + Sbjct: 217 PSIGLAQTLEKLGFVVGRLKTGTPPRIAKDSINFSILNKQTPDNPSVPFSFTNETVWIKP 276 Query: 237 --QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 Q+ C +T TN I+++N+ ++ + GPRYCPSIE K++RF R HQ++ Sbjct: 277 EDQLPCYLTHTNPRVDEIVLKNLHLNSHVKETTR--GPRYCPSIESKVLRFPNRL-HQVW 333 Query: 295 LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRP----------------- 337 LEPEG+++D++YP G+S LP E+Q + I I GLEK +I+P Sbjct: 334 LEPEGMDSDLIYPQGLSMTLPAELQEKMITCIRGLEKAKVIQPDGVLLLLPRMECNGVIL 393 Query: 338 --------GYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINS 389 GY ++YDY++P+++ P+LET + LF AGQINGTTGYEEAAAQG++AGIN+ Sbjct: 394 PHHNLSLPGYGVQYDYLDPRQITPSLETHLVQRLFFAGQINGTTGYEEAAAQGVIAGINA 453 Query: 390 ARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPI 449 + + ++ SRT+ YIGV+IDDLT+ G EPYRMFTSR E+R+SLRPDNAD RLT Sbjct: 454 SLRVSRKPPFVVSRTEGYIGVLIDDLTTLGTSEPYRMFTSRVEFRLSLRPDNADIRLTLR 513 Query: 450 GMK-LGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS---KNL-SSTSISFKQDGKTRTA 504 G K GC+ ++R +R S+LKS+ +S KNL SIS + R A Sbjct: 514 GYKDAGCVSQQRYERACWMKSSLEEGISVLKSIEFSSSKWKNLIPEVSISTSRSLPVR-A 572 Query: 505 YEFLSYPDFSIQNLFSICPDA-RKFSSL--VIERLQIESSYAAYTGRQMIEAKEIKFEEK 561 + L Y + + +L P+ +K++ + ERL+IE++Y + Q+ E K ++ +E Sbjct: 573 LDVLKYEEVDMDSLAKAVPEPLKKYTKCRELAERLKIEATYESVLFHQLQEIKGVQQDEA 632 Query: 562 RLIPKDFDYSSLP--ALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIK 614 +PKD DY ++ +LS+E++EKL +P + AS+I G+TPAA+ LL ++K Sbjct: 633 LQLPKDIDYLTIRDVSLSHEVREKLHFSRPQTIGAASRIPGVTPAAIINLLRFVK 687 >gi|261837662|gb|ACX97428.1| glucose inhibited division protein A [Helicobacter pylori 51] Length = 621 Score = 502 bits (1293), Expect = e-140, Method: Compositional matrix adjust. Identities = 279/621 (44%), Positives = 374/621 (60%), Gaps = 15/621 (2%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALD 66 D++VIGGGHAG EA+ +AAK+GA LIT TIG SCNPAIGGLGKGHL +E+D L Sbjct: 6 DILVIGGGHAGIEASLIAAKMGARVHLITMLIDTIGLASCNPAIGGLGKGHLTKEVDVLG 65 Query: 67 GLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAG 126 G MG + D +G+Q+RVLN KGPAVRG R Q D + YR+ + +L+ NL V Q Sbjct: 66 GAMGIITDNSGLQYRVLNASKGPAVRGTRAQIDMDTYRIFARNLVLNTPNLSVSQEMTES 125 Query: 127 FNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSF 186 E + + + N+ + V++TTGTFL+GV+HIG + GR G++ SNSL + Sbjct: 126 LIIENDEVVGVRTNINNTYKAKKVIITTGTFLKGVVHIGTHQNQNGRFGENASNSLALNL 185 Query: 187 MKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTN 246 + F RLKTGT R+ G +I ++ E+ F D FS+ T Q+ C IT TN Sbjct: 186 RELGFKVERLKTGTCPRVAGNSIDFEGLEEHFGDTNPPYFSYKTKDFNPTQLSCFITYTN 245 Query: 247 LETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVY 306 TH+II +N + ++SG I+ GPRYCPSIEDKI RF E+ HQ+FLEP+ ++ Y Sbjct: 246 PITHQIIRDNFHRAPLFSGQIEGIGPRYCPSIEDKINRFSEKERHQLFLEPQTIHKSEYY 305 Query: 307 PNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLA 366 NG+ST+LP ++Q + I +I GLE I R GYAIEYD+I P EL TLETKKI GL+LA Sbjct: 306 INGLSTSLPLDVQEKVIHSIKGLENALITRYGYAIEYDFIQPTELTHTLETKKIKGLYLA 365 Query: 367 GQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRM 426 GQINGTTGYEEAAAQGL+AGIN+ D R ++YIGV+IDDL +KG EPYRM Sbjct: 366 GQINGTTGYEEAAAQGLMAGINAVLALKNQDPFILKRNEAYIGVLIDDLVTKGTNEPYRM 425 Query: 427 FTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS- 485 FTSRAEYR+ LR DN RL +LG + + + K QE LK VLT Sbjct: 426 FTSRAEYRLLLREDNTLFRLGEHAYRLGLMEKDFYEGLKKDKQEIQDHLKRLKECVLTPS 485 Query: 486 -------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 L+ I+ K DG + L+ F+++ + S + V+E+++I Sbjct: 486 KEVLKRLNELNENPINDKIDGVS-----LLARDSFNLEKMRSFFSFLTPLNERVLEQIKI 540 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E Y Y +Q ++ K IPK F + +P LS E EKL +P +L +AS+I Sbjct: 541 ECKYNIYIEKQHENIAKMDSMLKVSIPKGFVFKGIPGLSLEAVEKLEKFRPKSLFEASEI 600 Query: 599 EGMTPAALNLLLIYI--KKNT 617 G+TPA L++L +YI +KN+ Sbjct: 601 SGITPANLDVLHLYIHLRKNS 621 >gi|225012535|ref|ZP_03702971.1| glucose inhibited division protein A [Flavobacteria bacterium MS024-2A] gi|225003512|gb|EEG41486.1| glucose inhibited division protein A [Flavobacteria bacterium MS024-2A] Length = 623 Score = 502 bits (1293), Expect = e-140, Method: Compositional matrix adjust. Identities = 281/620 (45%), Positives = 389/620 (62%), Gaps = 10/620 (1%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M +RS+DVIV+G GHAGCEAAA AA LG+ T LIT T G MSCNPA+GG+ KG +VR Sbjct: 1 MFDRSFDVIVVGAGHAGCEAAAAAANLGSKTLLITMNLQTTGQMSCNPAMGGIAKGQIVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G G V D IQ+++LN KGPA+ PR Q+DR ++ L + + NLD Sbjct: 61 EIDALGGYSGIVTDRTAIQYKMLNQSKGPAMWSPRAQSDRSMFSLEWRSMLEKTPNLDFY 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E++++ +V I +V+LT GTFL G+IHIG+ GR G+ + Sbjct: 121 QEMVVDLIVEQDLVKGVVTSLGLKIFGKSVILTNGTFLNGLIHIGEKNFGGGRAGEKAAV 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSF--MTDKITNRQI 238 L S F++GR+KTGTP R+DG+++ + K ++Q D FSF +T +T RQ+ Sbjct: 181 GLTTSLENLGFESGRMKTGTPPRVDGRSLDYTKMQEQPGDVTPSKFSFSDLTKPLT-RQL 239 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C IT TNL+ H I+ S +++G I+S GPRYCPSIEDKI RF +++ HQIF+EPE Sbjct: 240 SCHITHTNLDVHDILRSGFDRSPMFNGAIQSTGPRYCPSIEDKINRFSDKSQHQIFVEPE 299 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 G NT VY NG ST+LP++IQ++ ++++ G E V RPGYAIEYDY P +LF +LETK Sbjct: 300 GWNTVEVYVNGFSTSLPDDIQYKALKSVVGFENVKFFRPGYAIEYDYFPPTQLFHSLETK 359 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 + LF AGQINGTTGYEEAAAQGL+AGIN+ K++ R ++YIGV+IDDL K Sbjct: 360 NVQNLFFAGQINGTTGYEEAAAQGLMAGINAHLKASDKSPFVLGREEAYIGVLIDDLILK 419 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYRMFTSRAEYR LR DNAD RLTP +G +G+ R K+ + Q+ L L Sbjct: 420 GTEEPYRMFTSRAEYRTLLRQDNADERLTPKAHSIGLLGDDRLKKVEQKQQQRADLVRFL 479 Query: 479 KSLVLTSKNLSSTSISFKQDGKTRTA--YEFLSYPDFSIQNLF---SICPDARKF--SSL 531 + ++ ++ K D T+T + LS P + ++L SI F Sbjct: 480 RKTSYELNTANTVLLNNKSDTVTQTDKFAKLLSRPSITRKDLHQFKSINSYLNDFEIDDT 539 Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 V E+ +IE YA Y ++ A ++K E +IP+ F++ L +LS+E KEKL+ ++P Sbjct: 540 VFEQAEIEIKYAGYIEKEKRNADKLKRLENIVIPRGFNFDVLASLSHEAKEKLNKIRPDT 599 Query: 592 LLQASKIEGMTPAALNLLLI 611 + QAS+I G+ P+ +++LL+ Sbjct: 600 IAQASRISGINPSDISVLLV 619 >gi|171460946|ref|NP_080934.2| protein MTO1 homolog, mitochondrial precursor [Mus musculus] gi|148694452|gb|EDL26399.1| mitochondrial translation optimization 1 homolog (S. cerevisiae), isoform CRA_b [Mus musculus] Length = 669 Score = 502 bits (1293), Expect = e-140, Method: Compositional matrix adjust. Identities = 284/630 (45%), Positives = 405/630 (64%), Gaps = 25/630 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DV+VIGGGHAG EAAA AA+ G+ T L+TH+ TIG MSCNP+ GG+GKGHL+RE+DAL Sbjct: 36 FDVVVIGGGHAGTEAAAAAARCGSRTLLLTHRVDTIGQMSCNPSFGGIGKGHLMREVDAL 95 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGL R+ D +GI ++VLN +KGPAV G R Q DR+LY+ MQ+EILS L V +G V Sbjct: 96 DGLCSRICDQSGIHYKVLNRRKGPAVWGLRAQIDRKLYKQNMQKEILSTPLLTVQKGAVE 155 Query: 126 GFNTE--------KNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 K+ + +V+ D S I +V+LTTGTFLRG+I IG PAGR+GD Sbjct: 156 DLVLAEPEPGYPGKSRVRGVVLADGSTIYAESVILTTGTFLRGMIIIGLEMHPAGRLGDQ 215 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR- 236 PS L + K F GRLKTGTP RL ++I + K D+ IPFSF++D + + Sbjct: 216 PSIGLAQTLEKLGFMVGRLKTGTPPRLAKESINFSILNKHTPDDPSIPFSFLSDSVWIKP 275 Query: 237 --QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 Q+ C +T TN I++EN+ ++ K GPRYCPSIE K++RF R HQ++ Sbjct: 276 EDQLPCYLTHTNPRVDAIVLENLHLNSHVQETTK--GPRYCPSIESKVLRFPNRL-HQVW 332 Query: 295 LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT 354 LEPEG+++D++YP G+S LP E+Q + I I GLEK ++ PGY ++YDY++P+++ P+ Sbjct: 333 LEPEGMDSDLIYPQGLSVTLPAELQEKMITCIRGLEKAKMVHPGYGVQYDYLDPRQISPS 392 Query: 355 LETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDD 414 LET + LF AGQINGTTGYEEAAAQG++AGIN++ + ++ SRT+ YIGV+IDD Sbjct: 393 LETHLVQRLFFAGQINGTTGYEEAAAQGVIAGINASLRVSRKPPFVVSRTEGYIGVLIDD 452 Query: 415 LTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMK-LGCIGERRQKRFAKYIQEYNF 473 LT+ G EPYRMFTSR E+R+SLRPDNAD RLT K GC+ +R +R Sbjct: 453 LTTLGTSEPYRMFTSRVEFRLSLRPDNADTRLTFRAHKEAGCVSSQRFERALWMKSSLEE 512 Query: 474 LRSLLKSLVLTS----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA-RKF 528 S+LKS+ +S K + IS + +A + L Y + +++L + P+ K+ Sbjct: 513 GISVLKSIKFSSSKWKKLIPQIPISINRSLPV-SALDVLKYEEVDMESLVGVLPEPLEKY 571 Query: 529 SSL--VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSL--PALSNELKEKL 584 ++ + RL+IE+SY + Q+ E KE++ +E +P + DY ++ +LS E++EKL Sbjct: 572 TACRELARRLKIEASYESVLSYQLQEIKEVQQDEALQLPHELDYLTIRDVSLSQEVREKL 631 Query: 585 SILKPFNLLQASKIEGMTPAALNLLLIYIK 614 + +P + AS+I G+TPAA+ LL +++ Sbjct: 632 HLSRPQTIGAASRIPGVTPAAIINLLRFVR 661 >gi|78099012|sp|Q923Z3|MTO1_MOUSE RecName: Full=Protein MTO1 homolog, mitochondrial; Flags: Precursor gi|14485753|gb|AAK63070.1| MTO1 [Mus musculus] Length = 669 Score = 502 bits (1293), Expect = e-140, Method: Compositional matrix adjust. Identities = 284/630 (45%), Positives = 405/630 (64%), Gaps = 25/630 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DV+VIGGGHAG EAAA AA+ G+ T L+TH+ TIG MSCNP+ GG+GKGHL+RE+DAL Sbjct: 36 FDVVVIGGGHAGTEAAAAAARCGSRTLLLTHRVDTIGQMSCNPSFGGIGKGHLMREVDAL 95 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGL R+ D +GI ++VLN +KGPAV G R Q DR+LY+ MQ+EILS L V +G V Sbjct: 96 DGLCSRICDQSGIHYKVLNRRKGPAVWGLRAQIDRKLYKQNMQKEILSTPLLTVQKGAVE 155 Query: 126 GFNTE--------KNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 K+ + +V+ D S I +V+LTTGTFLRG+I IG PAGR+GD Sbjct: 156 DLVLAEPEPGYPGKSRVRGVVLADGSTIYAESVILTTGTFLRGMIIIGLEMHPAGRLGDQ 215 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR- 236 PS L + K F GRLKTGTP RL ++I + K D+ IPFSF++D + + Sbjct: 216 PSIGLAQTLEKLGFMVGRLKTGTPPRLGKESINFSILNKHTPDDPSIPFSFLSDSVWIKP 275 Query: 237 --QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 Q+ C +T TN I++EN+ ++ K GPRYCPSIE K++RF R HQ++ Sbjct: 276 EDQLPCYLTHTNPRVDAIVLENLHLNSHVQETTK--GPRYCPSIESKVLRFPNRL-HQVW 332 Query: 295 LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT 354 LEPEG+++D++YP G+S LP E+Q + I I GLEK ++ PGY ++YDY++P+++ P+ Sbjct: 333 LEPEGMDSDLIYPQGLSVTLPAELQEKMITCIRGLEKAKMVHPGYGVQYDYLDPRQISPS 392 Query: 355 LETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDD 414 LET + LF AGQINGTTGYEEAAAQG++AGIN++ + ++ SRT+ YIGV+IDD Sbjct: 393 LETHLVQRLFFAGQINGTTGYEEAAAQGVIAGINASLRVSRKPPFVVSRTEGYIGVLIDD 452 Query: 415 LTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMK-LGCIGERRQKRFAKYIQEYNF 473 LT+ G EPYRMFTSR E+R+SLRPDNAD RLT K GC+ +R +R Sbjct: 453 LTTLGTSEPYRMFTSRVEFRLSLRPDNADTRLTFRAHKEAGCVSSQRFERALWMKSSLEE 512 Query: 474 LRSLLKSLVLTS----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA-RKF 528 S+LKS+ +S K + IS + +A + L Y + +++L + P+ K+ Sbjct: 513 GISVLKSIKFSSSKWKKLIPQIPISINRSLPV-SALDVLKYEEVDMESLVGVLPEPLEKY 571 Query: 529 SSL--VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSL--PALSNELKEKL 584 ++ + RL+IE+SY + Q+ E KE++ +E +P + DY ++ +LS E++EKL Sbjct: 572 TACRELARRLKIEASYESVLSYQLQEIKEVQQDEALQLPHELDYLTIRDVSLSQEVREKL 631 Query: 585 SILKPFNLLQASKIEGMTPAALNLLLIYIK 614 + +P + AS+I G+TPAA+ LL +++ Sbjct: 632 HLSRPQTIGAASRIPGVTPAAIINLLRFVR 661 >gi|300864991|ref|ZP_07109821.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Oscillatoria sp. PCC 6506] gi|300336992|emb|CBN54971.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Oscillatoria sp. PCC 6506] Length = 634 Score = 502 bits (1293), Expect = e-140, Method: Compositional matrix adjust. Identities = 270/620 (43%), Positives = 372/620 (60%), Gaps = 17/620 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D+IV+G GH+GCEAA AA+L T L+T I CNPA+GG K L E+DAL Sbjct: 13 FDIIVVGAGHSGCEAALAAARLNCRTLLLTLNLDKIAWQPCNPAVGGPAKTQLTNEVDAL 72 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDV----IQ 121 G +G++AD +Q R+LN +GPAV R Q D+ Y M+ + +Q+NL + + Sbjct: 73 GGEIGKMADRTYLQKRILNSSRGPAVWALRAQTDKREYAAVMKNIVENQDNLSIRESMVT 132 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V G N E I + C V+LTTGTFL G+I +G +PAGR G+ + Sbjct: 133 DLVLGANDE---IIGVETYFGVAFGCKAVILTTGTFLGGIIWVGNKSMPAGRAGEFAAVG 189 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIEC 240 L + K F+TGRLKTGTPAR+D +++ + E Q D + FSF D R Q+ C Sbjct: 190 LTETLNKLGFETGRLKTGTPARVDKRSLNYTNLEPQPGDADVRWFSFDPDVWIEREQMPC 249 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +TRT ETHR+I EN+ S +Y G + + GPRYCPSIEDKIVRF +++ HQIF+EPEG Sbjct: 250 YLTRTTPETHRLIRENLHLSPVYGGWVDAKGPRYCPSIEDKIVRFADKDSHQIFIEPEGR 309 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + +Y G ST LPE +Q Q +RT+PGLE ++RP YA+EYDY+ + FPTL TKKI Sbjct: 310 DIPELYIQGFSTGLPENLQLQMLRTLPGLENCVMLRPAYAVEYDYLPATQCFPTLMTKKI 369 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQ+NGTTGYEEAAAQG+VAG+N+AR N + I F R SY+G +IDDL +K + Sbjct: 370 EGLFCAGQVNGTTGYEEAAAQGIVAGVNAARFVNHQEMIVFPREHSYLGTLIDDLCTKDL 429 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR----QKRFAKYIQEYNFLRS 476 EPYRM TSR+EYR+ LR DNAD RLTP+G ++G I +RR Q++ A I E L S Sbjct: 430 REPYRMLTSRSEYRLLLRSDNADQRLTPLGREIGLIDDRRWELFQRKQANIIAEKERLYS 489 Query: 477 LLKSLVLTSKNLSSTSISFKQDG--KTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIE 534 + V + + ++ Q + T + L P F ++L E Sbjct: 490 ---TRVKEGEEVGKAILADMQQSIKGSITLADLLRRPGFHYEDLERYNLANSNLELAEKE 546 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +I+ Y+ Y RQ + ++ E R +P D DY ++ LS E +EKL+ +KP + Q Sbjct: 547 GAEIDIKYSGYLQRQQHQIDQVSKHEHRQLPPDLDYMTIETLSKESREKLATVKPLTIGQ 606 Query: 595 ASKIEGMTPAALNLLLIYIK 614 A++I G+ PA + LLIY++ Sbjct: 607 AARIGGVNPADVTALLIYLE 626 >gi|319746160|gb|EFV98432.1| glucose inhibited division protein A [Streptococcus agalactiae ATCC 13813] Length = 633 Score = 502 bits (1293), Expect = e-140, Method: Compositional matrix adjust. Identities = 273/620 (44%), Positives = 383/620 (61%), Gaps = 14/620 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YD+IV+G GHAG EA+ A+++G T L T + M CNP+IGG KG +VREIDA Sbjct: 8 NYDIIVVGAGHAGVEASLAASRMGCKTLLATINLEMLAFMPCNPSIGGSAKGIVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ ++LN KGPAVR R QAD+ LY M++ + QENL + Q + Sbjct: 68 LGGEMGKNIDKTYIQMKMLNTGKGPAVRALRAQADKALYAQTMKQTVEKQENLTLRQAMI 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + N +VV+TTGT LRG I +G+LK +G S +L + Sbjct: 128 DEILVEDGKVVGVRTATNQKFSAKSVVITTGTALRGEIILGELKYSSGPNNSLASVTLAD 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT---DKITNRQIECG 241 + + GR KTGTP R+ +I ++KTE Q DE+ FSFM+ D IT+ Q+ C Sbjct: 188 NLRDLGLEIGRFKTGTPPRVKASSINYEKTEIQPGDEQPNHFSFMSRDEDYITD-QVPCW 246 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN +H II +N+ + ++SG +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG + Sbjct: 247 LTYTNTLSHDIINQNLHRAPMFSGIVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRH 306 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ VY G+ST+LPE++Q +R+I GLE ++R GYAIEYD + P +L TLETK I+ Sbjct: 307 TEEVYVQGLSTSLPEDVQVDLLRSIKGLENAEMMRTGYAIEYDIVLPHQLRATLETKVIA 366 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQ NGT+GYEEAA QGLVAGIN+A K + R+D+YIGVMIDDL +KG L Sbjct: 367 GLFTAGQTNGTSGYEEAAGQGLVAGINAALKVQGKPELILKRSDAYIGVMIDDLVTKGTL 426 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR----QKRFAKYIQEYNFLRSL 477 EPYR+ TSRAEYR+ LR DNAD RLT IG ++G + E R +KR ++ E L S+ Sbjct: 427 EPYRLLTSRAEYRLILRHDNADMRLTEIGYEIGLVDEERYAIFKKRQMQFENELERLDSI 486 Query: 478 -LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPD--FSIQNLFSICPDARKFSSLVIE 534 LK + T+K + + FK TA EF+ P +++ F C D S VIE Sbjct: 487 KLKPVSETNKRIQ--ELGFKPLTDALTAKEFMRRPQITYAVATDFVGCAD-EPLDSKVIE 543 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 L+ E Y Y + + + ++K E++ IP D+ + +++ E ++K + P L Q Sbjct: 544 LLETEIKYEGYIKKALDQVAKMKRMEEKRIPPHIDWDDIDSIATEARQKFKKINPETLGQ 603 Query: 595 ASKIEGMTPAALNLLLIYIK 614 AS+I G+ PA +++L++Y++ Sbjct: 604 ASRISGVNPADISILMVYLE 623 >gi|302672307|ref|YP_003832267.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Butyrivibrio proteoclasticus B316] gi|302396780|gb|ADL35685.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Butyrivibrio proteoclasticus B316] Length = 642 Score = 502 bits (1293), Expect = e-140, Method: Compositional matrix adjust. Identities = 279/631 (44%), Positives = 377/631 (59%), Gaps = 22/631 (3%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 I YDV VIG GHAGCEAA A+LG T + T I M CNP IGG KGHLVRE Sbjct: 4 IREKYDVAVIGAGHAGCEAALACARLGLETIIFTMSADNIAFMPCNPHIGGSSKGHLVRE 63 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G MG+V D +Q ++LN KGPAV R QAD+ Y M+R + +QE+L + Q Sbjct: 64 IDALGGQMGKVIDKTFLQSKMLNTSKGPAVHSLRCQADKMEYSKEMKRVLEAQEHLSIKQ 123 Query: 122 GEVAGF--------NTEKNIISSIV---MQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIP 170 EV+ N E IV + + V+L TGT+L+ G+ Sbjct: 124 AEVSEILMEDYQVDNEEAEYTKKIVGVKIFSGIVYDVKAVILCTGTYLKSRCLTGEAITY 183 Query: 171 AGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT 230 +G G PSN L S + + R KTGTPAR+DG TI + K +QF D ++PFSF T Sbjct: 184 SGPNGLLPSNLLSQSLIDAGIELRRFKTGTPARMDGNTIDYSKMSEQFGDSPVVPFSFDT 243 Query: 231 D--KITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGER 288 D ++ Q+ C +T TN +TH II NI S IY+G I+ GPRYCPSIEDK+V+F + Sbjct: 244 DPDEVQRPQVSCWLTYTNEKTHEIIRNNIDRSPIYAGIIEGIGPRYCPSIEDKVVKFPDH 303 Query: 289 NGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINP 348 HQ+F+EPEG T+ VY +G+S++LPE++Q RT+PGLE I++ YAIEYD + P Sbjct: 304 ERHQVFVEPEGTYTNEVYIDGMSSSLPEDVQIAMYRTVPGLENCKIVKSAYAIEYDCLCP 363 Query: 349 KELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYI 408 +L P+LE K I GLF AGQ NG++GYEEAAAQGL AGIN+A + + R++ YI Sbjct: 364 GQLMPSLEIKNIHGLFSAGQFNGSSGYEEAAAQGLYAGINAAMQIKNKPYLTIDRSEGYI 423 Query: 409 GVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYI 468 GV++DDL +K LEPYRM TSRAEYR+ LR DNAD RL G ++G I E + R I Sbjct: 424 GVLVDDLVTKENLEPYRMMTSRAEYRLLLRQDNADIRLRKKGYEVGLISEDKYNRLTDKI 483 Query: 469 QEYNFLRSLLKSLVLTSKNLSSTSISFKQDG-----KTRTAY-EFLSYPDFSIQNLFSIC 522 + + ++ L T+ ++T F +D KT T+ E + P+FS + L I Sbjct: 484 DK---IAKEVERLKNTTVGANATIQKFMEDNGSSPLKTATSLAELICRPEFSYETLAPID 540 Query: 523 PDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKE 582 + S VIE+++I Y Y RQ + ++ K EK+LIP D DYS + +L E ++ Sbjct: 541 KERPVLSKEVIEQVEITIRYEGYINRQERQVEQFKKLEKKLIPADIDYSDVSSLRLEARQ 600 Query: 583 KLSILKPFNLLQASKIEGMTPAALNLLLIYI 613 KL +P N+ QAS+I G+ PA +++LLIY+ Sbjct: 601 KLEKFRPTNIGQASRIGGVNPADVSVLLIYL 631 >gi|187735314|ref|YP_001877426.1| glucose inhibited division protein A [Akkermansia muciniphila ATCC BAA-835] gi|187425366|gb|ACD04645.1| glucose inhibited division protein A [Akkermansia muciniphila ATCC BAA-835] Length = 628 Score = 502 bits (1293), Expect = e-140, Method: Compositional matrix adjust. Identities = 278/636 (43%), Positives = 375/636 (58%), Gaps = 47/636 (7%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DV+V+G GHAG EAA A++LG S A++TH TIG MSCNPAIGGL KGH+VREIDA+ Sbjct: 12 FDVLVVGAGHAGIEAALAASRLGCSVAVLTHNLDTIGQMSCNPAIGGLAKGHIVREIDAM 71 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG DA IQFR+LN KGP+VR PR Q D+ YR M+ + + + + QG+V Sbjct: 72 GGAMGLNTDATAIQFRMLNASKGPSVRAPRAQCDKTAYRTRMKMVLETAPGIRLFQGDVV 131 Query: 126 GF--NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 N E+ + V I +V++ +GTF++G++H+G I GRMG S+SL Sbjct: 132 KLLVNGEQQATGA-VTSLGCAIHARSVIICSGTFMKGLLHVGLQHITGGRMG-CASSSLS 189 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR------- 236 F RLKTGT R++G++I + E Q D FS+ + I R Sbjct: 190 ADLAMLGFQVERLKTGTSPRVNGRSIDFSVCEIQPGDAPEALFSYRSRDILKRDSEPFCT 249 Query: 237 ------------QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVR 284 Q+ C IT TN TH II +N+K S +YSG I+ GPRYCPSIEDKIVR Sbjct: 250 LNTWGDENFRMKQMPCWITYTNQTTHDIIRKNLKFSPLYSGIIEGVGPRYCPSIEDKIVR 309 Query: 285 FGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYD 344 F E+N HQ+FLEPEG +T+ Y NG+ST+LP Q FI TIPGLE +IRPGYA+EYD Sbjct: 310 FAEKNSHQVFLEPEGRSTEEFYLNGVSTSLPYSAQCDFIHTIPGLENAQLIRPGYAVEYD 369 Query: 345 YINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 + P +L PTLETK + L+ AGQINGT+GYEEAAAQGL+AG N+A K+ + R Sbjct: 370 FCPPTQLHPTLETKLVENLYFAGQINGTSGYEEAAAQGLMAGANAALKTLGKPSLVLRRD 429 Query: 405 DSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLG---CIGERRQ 461 +YIGVMIDDL +KG EPYRMFTSRAE+R+ LR DNAD RL P+ + G C R+ Sbjct: 430 QAYIGVMIDDLVTKGTDEPYRMFTSRAEFRLLLRQDNADLRLAPLAFEAGLITCEMARKA 489 Query: 462 KRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI 521 + ++E ++K+ L + + S S K+ G T F +++L +I Sbjct: 490 EDRKNAVEE-----GIIKAAALKHEGV-SLSTWLKRPGNDWTLLPEELKKMFHVEHLDAI 543 Query: 522 CPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELK 581 D + Y + RQ +A++I E + IP D DY + AL E Sbjct: 544 ATDIQ---------------YEGHIERQKKQAEKIIRMENKTIPSDIDYKHVHALKKEAV 588 Query: 582 EKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNT 617 KL ++P + QAS+I G+TPA + LLL++++K + Sbjct: 589 IKLGNIRPATIGQASRIPGITPADIALLLVHLQKRS 624 >gi|168334918|ref|ZP_02693038.1| glucose inhibited division protein A [Epulopiscium sp. 'N.t. morphotype B'] Length = 635 Score = 502 bits (1293), Expect = e-140, Method: Compositional matrix adjust. Identities = 266/617 (43%), Positives = 378/617 (61%), Gaps = 11/617 (1%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALD 66 D IVIGGGHAGCEAA A+LG T + I M CNP IGG KGHLV+EIDAL Sbjct: 9 DAIVIGGGHAGCEAALSLARLGKKTVIFCLNIEAIAKMPCNPNIGGTSKGHLVKEIDALG 68 Query: 67 GLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAG 126 G MG+ D IQ ++LN KGPAV R QAD+ Y AM + + ++ NL + Q EV+ Sbjct: 69 GEMGKNIDKTYIQSKMLNTSKGPAVHSLRAQADKVEYHKAMLKVLDAETNLTIKQQEVSD 128 Query: 127 FNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSF 186 E + + ++ VV+ TGT+L+ I IG+ AG G S L NS Sbjct: 129 ILIENARVMGVRTITGAIYYAKAVVVCTGTYLKSKIFIGEFAENAGPDGLKSSQVLSNSL 188 Query: 187 MKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KITNRQIECGITR 244 + R KTGTPAR+D +TI + E Q D +++PFSF I QI+C +T Sbjct: 189 LDNGITLRRFKTGTPARVDKRTIDFTAMEAQLGDSKVVPFSFSNSAASIKKNQIQCFLTY 248 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH+II +N+ S +Y G I+ GPRYCPSIEDK+VRF +++ HQIF+EPEG+ T+ Sbjct: 249 TNEQTHQIIRDNLDRSPLYGGKIEGVGPRYCPSIEDKVVRFADKSRHQIFIEPEGVETNE 308 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+S++LPEE+Q Q +R++ GLE V +IR GYAIEYD INP L +LE K ISGLF Sbjct: 309 MYVQGMSSSLPEEVQIQMLRSVRGLENVEVIRGGYAIEYDCINPTSLLHSLENKVISGLF 368 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQING++GYEEAAAQGLVAGIN+A K + + + R + YIGV+IDDL KG EPY Sbjct: 369 FAGQINGSSGYEEAAAQGLVAGINAALKIDAKEPLIIDRAEGYIGVLIDDLVIKGTNEPY 428 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL--V 482 RM TSRAEYR+ LR DNAD RL G +G + + +AK++ + + + ++ + V Sbjct: 429 RMLTSRAEYRLLLRQDNADIRLMTKGHDIGLVPD---DIYAKFLDKQEVIEAEIERIKKV 485 Query: 483 LTSKNLSSTSISFKQDGKTRTA----YEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 + SI + T+ +E L P+ ++ ++ D + S +IE+++I Sbjct: 486 FVGTTATVQSILMAKGSTPLTSGMSLHELLKRPELDYKDFAAVNLDGPELSDEIIEQIEI 545 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 Y Y RQ+I+ + K EK+LIP++ Y + +L E ++KL +KP ++ AS+I Sbjct: 546 TLKYEGYIKRQLIQVDQFKKLEKKLIPENLKYEDIKSLRIEARQKLLEIKPKSIGAASRI 605 Query: 599 EGMTPAALNLLLIYIKK 615 G++PA ++++L+Y+++ Sbjct: 606 SGVSPADISVMLVYMEQ 622 >gi|208434162|ref|YP_002265828.1| glucose inhibited division protein A [Helicobacter pylori G27] gi|226700964|sp|B5Z9Y2|MNMG_HELPG RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|208432091|gb|ACI26962.1| glucose inhibited division protein A [Helicobacter pylori G27] Length = 621 Score = 502 bits (1293), Expect = e-140, Method: Compositional matrix adjust. Identities = 281/627 (44%), Positives = 375/627 (59%), Gaps = 16/627 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M+ S D++V+GGGHAG EA+ VAAK+GA LIT TIG SCNPAIGGLGKGHL + Sbjct: 1 MVKES-DILVVGGGHAGIEASLVAAKMGARVHLITMLIDTIGLASCNPAIGGLGKGHLTK 59 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+D L G MG + D +G+Q+RVLN KGPAVRG R Q D + YR+ + +LS NL V Sbjct: 60 EVDVLGGAMGIITDNSGLQYRVLNASKGPAVRGTRAQIDMDTYRIFARNLVLSTPNLSVS 119 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q + + + + N+ + V++TTGTFL+GV+HIG+ + GR G++ SN Sbjct: 120 QEMTESLIIKNDEVVGVTTNINNTYKAKKVIITTGTFLKGVVHIGEHQNQNGRFGENASN 179 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 SL + + F RLKTGT R+ G +I ++ E+ F D FS+ T Q+ C Sbjct: 180 SLALNLRELGFKVDRLKTGTCPRVAGNSIDFEGLEEHFGDTNPPYFSYKTKDFNPTQLSC 239 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN TH+II +N + ++SG I+ GPRYCPSIEDKI RF E+ HQ+FLEP+ + Sbjct: 240 FITYTNPITHQIIRDNFHRAPLFSGQIEGIGPRYCPSIEDKINRFSEKERHQLFLEPQTI 299 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + Y NG+ST+LP ++Q + I +I GLE I R GYAIEYD+I P EL TLETKKI Sbjct: 300 HKSEYYINGLSTSLPLDVQEKVIHSIKGLENALITRYGYAIEYDFIQPTELTHTLETKKI 359 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GL+LAGQINGTTGYEEAAAQGL+AGIN+ R ++YIGV+IDDL +KG Sbjct: 360 KGLYLAGQINGTTGYEEAAAQGLMAGINAVLALKNQAPFILKRNEAYIGVLIDDLITKGT 419 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DN RL +LG + + K K Q LK Sbjct: 420 NEPYRMFTSRAEYRLLLREDNTLFRLGEHAYRLGLMEQDFYKELEKDKQAIQENLKRLKE 479 Query: 481 LVLTS--------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV 532 VLT L I+ K DG + L+ F+I+ + S + V Sbjct: 480 CVLTPSKEVLKRLNELDENPINDKMDGVS-----LLARDSFNIEKMRSFFSFLAPLNERV 534 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 +E+++IE Y Y +Q ++ K IPK F + +P LS E EKL +P +L Sbjct: 535 LEQIKIECKYNIYIEKQHENIAKMDSMLKVSIPKGFVFKGIPGLSLEAVEKLEKFRPKSL 594 Query: 593 LQASKIEGMTPAALNLLLIYI--KKNT 617 +AS+I G+TPA L++L +YI +KN+ Sbjct: 595 FEASEISGITPANLDVLHLYIHLRKNS 621 >gi|76786721|ref|YP_330690.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus agalactiae A909] gi|77407093|ref|ZP_00784094.1| glucose inhibited division protein A [Streptococcus agalactiae H36B] gi|123601023|sp|Q3JYG3|MNMG_STRA1 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|76561778|gb|ABA44362.1| glucose-inhibited division protein A [Streptococcus agalactiae A909] gi|77174300|gb|EAO77168.1| glucose inhibited division protein A [Streptococcus agalactiae H36B] Length = 633 Score = 502 bits (1292), Expect = e-140, Method: Compositional matrix adjust. Identities = 273/620 (44%), Positives = 383/620 (61%), Gaps = 14/620 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YD+IV+G GHAG EA+ A+++G T L T + M CNP+IGG KG +VREIDA Sbjct: 8 NYDIIVVGAGHAGVEASLAASRMGCKTLLATINLEMLAFMPCNPSIGGSAKGIVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ ++LN KGPAVR R QAD+ LY M++ + QENL + Q + Sbjct: 68 LGGEMGKNIDKTYIQMKMLNTGKGPAVRALRAQADKALYAQTMKQTVEKQENLTLRQAMI 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + N +VV+TTGT LRG I +G+LK +G S +L + Sbjct: 128 DEILVEDGKVVGVRTATNQKFSAKSVVITTGTALRGEIILGELKYSSGPNNSLASVTLAD 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT---DKITNRQIECG 241 + + GR KTGTP R+ +I ++KTE Q DE+ FSFM+ D IT+ Q+ C Sbjct: 188 NLRDLGLEIGRFKTGTPPRVKASSINYEKTEIQPGDEQPNHFSFMSRDEDYITD-QVPCW 246 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN +H II +N+ + ++SG +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG + Sbjct: 247 LTYTNTLSHDIINQNLHRAPMFSGIVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRH 306 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ VY G+ST+LPE++Q +R+I GLE ++R GYAIEYD + P +L TLETK I+ Sbjct: 307 TEEVYVQGLSTSLPEDVQVDLLRSIKGLENAEMMRTGYAIEYDIVLPHQLRATLETKVIA 366 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQ NGT+GYEEAA QGLVAGIN+A K + R+D+YIGVMIDDL +KG L Sbjct: 367 GLFTAGQTNGTSGYEEAAGQGLVAGINAALKVQGKPELILKRSDAYIGVMIDDLVTKGTL 426 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR----QKRFAKYIQEYNFLRSL 477 EPYR+ TSRAEYR+ LR DNAD RLT IG ++G + E R +KR ++ E L S+ Sbjct: 427 EPYRLLTSRAEYRLILRHDNADMRLTEIGYEIGLVDEERYAIFKKRQMQFENELERLDSI 486 Query: 478 -LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPD--FSIQNLFSICPDARKFSSLVIE 534 LK + T+K + + FK TA EF+ P +++ F C D S VIE Sbjct: 487 KLKPVSETNKRIQ--ELGFKPLTDALTAKEFMRRPQITYAVATDFVGCAD-EPLDSKVIE 543 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 L+ E Y Y + + + ++K E++ IP D+ + +++ E ++K + P L Q Sbjct: 544 LLETEIKYEGYIKKALDQVAKMKRMEEKRIPPHIDWDDIDSIATEARQKFKKINPETLGQ 603 Query: 595 ASKIEGMTPAALNLLLIYIK 614 AS+I G+ PA +++L++Y++ Sbjct: 604 ASRISGVNPADISILMVYLE 623 >gi|291547597|emb|CBL20705.1| glucose-inhibited division protein A [Ruminococcus sp. SR1/5] Length = 629 Score = 502 bits (1292), Expect = e-140, Method: Compositional matrix adjust. Identities = 265/629 (42%), Positives = 385/629 (61%), Gaps = 29/629 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D+IV+G GHAGCEA+ A+LG +T + T +I M CNP +GG KGHLVRE+DAL Sbjct: 8 FDIIVVGAGHAGCEASLACARLGLNTVMFTVSVDSIALMPCNPNVGGSSKGHLVRELDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ D IQ ++LN KGPAV R QAD++ Y M++ + + ENL + QGEV Sbjct: 68 GGEMGKNIDKTFIQSKMLNQSKGPAVHSLRAQADKQAYSTEMRKTLENTENLTIRQGEVT 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E I+ + + VVL TGT+L+ G + G G +N L +S Sbjct: 128 ELLVEDGHITGVKTFSGATYHAKAVVLCTGTYLKARCIYGDVSNYTGPNGLQAANYLTDS 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KITNRQIECGIT 243 K + R KTGTPAR+ G TI + K E+QF DER++PFSF TD + Q C +T Sbjct: 188 LKKLGIEMFRFKTGTPARIAGNTIDYSKMEEQFGDERVVPFSFSTDPESVQIEQKSCWLT 247 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH II N+ S +YSG I+ GPRYCPSIEDK+VRF ++ HQ+F+EPEGL T+ Sbjct: 248 YTNEKTHEIIRANLDRSPLYSGMIEGTGPRYCPSIEDKVVRFADKKRHQVFIEPEGLYTN 307 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G+S++LPE++Q++ ++PGLE I++ YAIEYD INP++L+PTLE KKI GL Sbjct: 308 EMYIGGMSSSLPEDVQYEMYHSVPGLENARIVKNAYAIEYDCINPRQLYPTLEFKKIKGL 367 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F GQ NG++GYEEAAAQGL+AGIN+A + + + R+++YIGV+IDDL +K EP Sbjct: 368 FSGGQFNGSSGYEEAAAQGLIAGINAAMEVKGREQLILDRSEAYIGVLIDDLVTKENHEP 427 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIG-------ERRQKRFAKYIQEYNF--- 473 YRM TSRAEYR+ LR DNAD RL G ++G I + +++R + I+ Sbjct: 428 YRMMTSRAEYRLLLRQDNADLRLRKKGWEVGLIDDETYHKLQEKERRIQEEIERVEHATV 487 Query: 474 -----LRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF 528 ++SLL+SL T S T+I+ E + P+ + + L I + + Sbjct: 488 GGSAEVQSLLESLNSTLLK-SGTTIA-----------ELIRRPELNYKVLAPIDKERPEL 535 Query: 529 SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 V E+++I Y Y RQM + ++ K E++ +P+D DY + +L E ++KL + Sbjct: 536 PEDVCEQVEINIKYDGYIRRQMKQVEQFKKLEQKKLPEDIDYEDVGSLRIEARQKLEAYR 595 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIKKNT 617 P ++ QAS+I G++PA +++LL+Y++ + Sbjct: 596 PVSIGQASRISGVSPADISVLLVYLESRS 624 >gi|262281667|ref|ZP_06059436.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Streptococcus sp. 2_1_36FAA] gi|262262121|gb|EEY80818.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Streptococcus sp. 2_1_36FAA] Length = 639 Score = 502 bits (1292), Expect = e-140, Method: Compositional matrix adjust. Identities = 269/642 (41%), Positives = 386/642 (60%), Gaps = 33/642 (5%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYD+IVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DA Sbjct: 8 SYDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M + D + IQ ++LN KGPAVR R QAD+ELY M++ + +QENL + Q Sbjct: 68 LGGEMAKNIDKSYIQMKMLNTGKGPAVRALRAQADKELYSKEMRKTVENQENLTLRQ--- 124 Query: 125 AGFNTEKNIISSIVMQDNSMIRCST----------VVLTTGTFLRGVIHIGKLKIPAGRM 174 +I+ I+++D +I T V++TTGT LRG I IG LK +G Sbjct: 125 -------TMINEILVEDGKVIGVKTATHQEYAAKAVIVTTGTALRGEIIIGDLKYSSGPN 177 Query: 175 GDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DK 232 + L ++ F+ GR KTGTP R+ +I +D TE Q DE+ FS+ + + Sbjct: 178 HSLAAIPLADNLRDLGFEIGRFKTGTPPRVKASSINYDVTEIQPGDEKANHFSYTSRDED 237 Query: 233 ITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQ 292 Q+ C +T TN E+H II N+ + ++SG +K GPRYCPSIEDKIVRF ++ HQ Sbjct: 238 YVKDQVPCWLTYTNPESHEIIQNNLHRAPMFSGIVKGVGPRYCPSIEDKIVRFADKERHQ 297 Query: 293 IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF 352 +FLEPEG +T+ VY G+ST+LPE++Q + +I GLE ++R GYAIEYD I P +L Sbjct: 298 LFLEPEGRDTEEVYVQGLSTSLPEDVQKDLVHSIKGLENAEMMRTGYAIEYDMIMPHQLR 357 Query: 353 PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMI 412 TLETKKISGLF AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMI Sbjct: 358 ATLETKKISGLFTAGQTNGTSGYEEAAGQGIIAGINAALKIQGKPELILKRSDGYIGVMI 417 Query: 413 DDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYN 472 DDL +KG +EPYR+ TSRAEYR+ LR DNAD RLT +G ++G + + R RF +++ Sbjct: 418 DDLVTKGTVEPYRLLTSRAEYRLILRHDNADMRLTEMGREIGLVDDERWARFEIKKNQFD 477 Query: 473 FLRSLLKSLVL---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKF 528 L+S+ L N ++ FK TA EF+ P+ S Q++ I P A + Sbjct: 478 NEMKRLESIKLKPVKETNAKVEALGFKPLTDAVTAKEFMRRPEVSYQDVVQFIGPAAEEL 537 Query: 529 SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 +IE ++ E Y Y + + + +++K E++ IP + D+ + +++ E ++K + Sbjct: 538 DEKIIELIETEIKYEGYISKALDQVEKMKRMEEKRIPANIDWDDIDSIATEARQKFKKIN 597 Query: 589 PFNLLQASKIEGMTPAALNLLLIY-------IKKNTVKLNEI 623 P + QAS+I G+ PA +++L++Y I KN K N + Sbjct: 598 PETIGQASRISGVNPADISILMVYLEGKARSISKNKEKQNHV 639 >gi|323341064|ref|ZP_08081312.1| glucose inhibited division protein A [Lactobacillus ruminis ATCC 25644] gi|323091485|gb|EFZ34109.1| glucose inhibited division protein A [Lactobacillus ruminis ATCC 25644] Length = 635 Score = 502 bits (1292), Expect = e-140, Method: Compositional matrix adjust. Identities = 265/621 (42%), Positives = 376/621 (60%), Gaps = 8/621 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAA A+++G T LIT + M CNPA+GG KG +VRE+DAL Sbjct: 12 YDVIVVGAGHAGCEAALAASRMGNKTLLITINLEMVAFMPCNPAVGGPAKGIVVREVDAL 71 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MGR D IQ R+LN KGPAVR R QAD+ Y + M+ + + NL + QG V Sbjct: 72 GGEMGRNTDKTYIQMRMLNTGKGPAVRALRAQADKRQYSIEMKHTLEKEPNLTLRQGIVD 131 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E+ I +V + VVLTTGT RG I IG+L +G P+ L + Sbjct: 132 DLIVEEGKIKGVVTNTGACYGAKAVVLTTGTAARGKIIIGELMYSSGPNNTQPAIKLSEN 191 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK----ITNRQIECG 241 + F R KTGTP R+DG TI + KTE+Q D FS+ + Q+ C Sbjct: 192 LERLGFKLKRFKTGTPPRVDGNTIDYAKTEEQPGDSTPHLFSYESKDEDYLDVKNQLSCW 251 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN +TH++I +N+ + +Y+G I+ GPRYCPSIE KIVRF ++ HQ+F+EPEG N Sbjct: 252 LTYTNEKTHKLIQDNLDRAPMYTGAIEGVGPRYCPSIETKIVRFADKARHQLFVEPEGRN 311 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 TD Y G+ST++PEEIQ + + +I GLE ++RPGYAIEYD + P +L PTLETK + Sbjct: 312 TDEYYVQGLSTSMPEEIQLKMVHSIEGLEHAEMMRPGYAIEYDVVEPYQLRPTLETKLVR 371 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GL+ AGQ NGT+GYEEAA QG++AGIN+ R + + I R+D+YIGVM+DDL +KG Sbjct: 372 GLYTAGQTNGTSGYEEAAGQGILAGINAGRHALGKEEIVLKRSDAYIGVMVDDLVTKGTN 431 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAEYR+ LR DNAD RLT +G ++G I + R ++F + + + L+S+ Sbjct: 432 EPYRLLTSRAEYRLILRHDNADLRLTELGHEIGLISDERYEKFLEKKKAIKEEEARLESI 491 Query: 482 VLTSKNLSSTSISFKQDGKTRT---AYEFLSYPDFSIQNLFSICPDARK-FSSLVIERLQ 537 + + D + A +FL P + +L P K VIE+++ Sbjct: 492 RIKPGKEVDEYLEKHGDRALKDGVLASDFLRRPYVTYADLLHFIPAPEKTLDRHVIEQIE 551 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ Y+ Y ++ + +++K E + IP+ DYS++ L+ E +KL+ ++P L QAS+ Sbjct: 552 IQYKYSGYIKKEYEQIEKLKRMEAKKIPERIDYSAIEGLATEAMQKLTKIQPETLAQASR 611 Query: 598 IEGMTPAALNLLLIYIKKNTV 618 I G+ PA L +L +YI++ + Sbjct: 612 ISGVNPADLAILAVYIEQGKI 632 >gi|293374959|ref|ZP_06621255.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Turicibacter sanguinis PC909] gi|325844315|ref|ZP_08168091.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Turicibacter sp. HGF1] gi|292646436|gb|EFF64450.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Turicibacter sanguinis PC909] gi|325489182|gb|EGC91564.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Turicibacter sp. HGF1] Length = 625 Score = 502 bits (1292), Expect = e-140, Method: Compositional matrix adjust. Identities = 269/622 (43%), Positives = 380/622 (61%), Gaps = 10/622 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAG EAA A++G T ++T + IG M CNPAIGG KG +VREIDAL Sbjct: 3 YDVIVVGGGHAGIEAALAPARMGCQTLMVTGDINRIGHMPCNPAIGGPAKGIVVREIDAL 62 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG D IQ R+LN KGPAVR R QAD+ Y MQ+ +LSQENLDV + V Sbjct: 63 GGEMGANTDKTHIQMRMLNTGKGPAVRALRAQADKVDYPKEMQKTVLSQENLDVKEAIVD 122 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + I ++ I TV+LTTGT++ + I +G G S L S Sbjct: 123 NLIVEDGTVKGITLESGEQIFGKTVILTTGTYMHSKVMISDEITLSGPDGAKTSLGLSQS 182 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK--ITNRQIECGIT 243 F+ RLKTGTP R+ ++ + KTE Q D+ + FSF T + Q+ C +T Sbjct: 183 LKDLGFELFRLKTGTPPRVATDSVDFSKTEIQPGDDVVRAFSFDTKEHLPLEDQVPCYLT 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 T+ +TH+IIM+N+ S++YSG ++ GPRYCPSIEDK+VRF ++ HQIFLEPE + D Sbjct: 243 YTSGDTHQIIMDNLTRSSMYSGVVEGVGPRYCPSIEDKVVRFNDKPRHQIFLEPESKHID 302 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G S++LP ++Q + IRTI GLE I+R YAIEYD I P +L+P+LETK + L Sbjct: 303 EIYVQGFSSSLPRDVQEKMIRTIAGLENCRIVRYAYAIEYDAIKPVQLWPSLETKLVKNL 362 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGT+GYEEAA QG++AGIN+A + D + R+++YIGV+IDDL +KG LEP Sbjct: 363 YSAGQINGTSGYEEAAGQGIMAGINAALRVQGKDPLILKRSEAYIGVLIDDLVTKGTLEP 422 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RL G ++G I E + F + + L + + Sbjct: 423 YRLLTSRAEYRLLLRHDNADLRLREYGHQVGLINEEKYAAFLDKKAQIEAEKERLSQIKI 482 Query: 484 TSKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARK-FSSLVIERLQ 537 T K L S S +DG TA E L P+ + Q++ S+ + + S VIE+++ Sbjct: 483 TPKGNTNEYLESIPSSPLKDGI--TALELLKRPEITYQHIHSLIEEKNESISEEVIEQVE 540 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ Y Y + + + +++ E++ IP DY +P L+ E K+KL ++P + QA++ Sbjct: 541 IQVKYEGYINKALQQVEKLHKVEEKKIPDYIDYDDVPNLAIEAKQKLKDIRPLTIGQATR 600 Query: 598 IEGMTPAALNLLLIYIKKNTVK 619 I G+ PA +++L++Y++ K Sbjct: 601 ISGVNPADISILMVYLESGKFK 622 >gi|326804312|ref|YP_004322130.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Aerococcus urinae ACS-120-V-Col10a] gi|326650443|gb|AEA00626.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Aerococcus urinae ACS-120-V-Col10a] Length = 644 Score = 502 bits (1292), Expect = e-140, Method: Compositional matrix adjust. Identities = 266/624 (42%), Positives = 370/624 (59%), Gaps = 12/624 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 S+DVIV+G GHAGCEAA +A++G T L+T + + M CNP+IGG KG +VREIDA Sbjct: 8 SFDVIVVGAGHAGCEAALASARMGMETLLVTIDINMVAFMPCNPSIGGPAKGVVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ R+LN KGPAVR R QAD+E Y M+R + QE L + QG V Sbjct: 68 LGGEMGKNIDKTYIQMRMLNTGKGPAVRALRAQADKEAYAREMRRTVERQEGLTLRQGIV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ Q ++ R +LT GT RG I IG+LK AG P+ +L Sbjct: 128 DDLVVEDGVCRGVITQTGALYRSKATILTMGTSARGEIIIGELKYSAGPNNSQPALNLTK 187 Query: 185 SFM-KFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK----ITNRQIE 239 + K+ FD R KTGTP R+D KT+ + K E Q FSFMT + Q+ Sbjct: 188 NLAEKYGFDITRFKTGTPPRVDKKTVDFSKMEIQPGSAEPNHFSFMTPDENYIPVSEQVP 247 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +T TN +TH +I N+ + +++G ++ G RYCPSIEDKIVRF ++ HQ+FLEPEG Sbjct: 248 CHLTFTNAKTHELIRANLDRAPMFTGIVEGVGARYCPSIEDKIVRFADKPKHQLFLEPEG 307 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 + + +Y G+ST+LPE++Q + + +I G+EK IIR GYAIEYD + P +L T ETK Sbjct: 308 RDNEEIYLQGLSTSLPEDVQIEMVHSITGMEKAQIIRDGYAIEYDVVRPSQLKATFETKA 367 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I L+ AGQ NGT+GYEEAA QGL AGIN+ K + R ++YIGV++DDL +KG Sbjct: 368 IENLYTAGQTNGTSGYEEAAGQGLYAGINAVLKIQGKEAFILGRDEAYIGVLVDDLVTKG 427 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYR+ TSRAEYR+ LR DNAD RLT G ++G + E R + F + N L+ Sbjct: 428 TTEPYRLLTSRAEYRLLLRHDNADWRLTEKGYEIGLVTEDRYQAFKAHQAAVNEELDRLE 487 Query: 480 SLVLTSKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIE 534 L + L S S +DG A E L P+ SI ++ P + V E Sbjct: 488 HTRLKPSDDLQAYLESKGSSRLKDGI--LASELLRRPELSIDDILKFAPGDKDLGHKVYE 545 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 + + YA Y + + K ++ E +LIP+D DYS + L+ E K++LS ++P L Q Sbjct: 546 EVAVAIKYAGYIEKAQKQVKRLRKMEGKLIPEDIDYSQIEGLATEAKDRLSTIEPRTLAQ 605 Query: 595 ASKIEGMTPAALNLLLIYIKKNTV 618 AS++ G+ PA +++L +Y++ TV Sbjct: 606 ASRVSGVNPADVSILAVYLESATV 629 >gi|283797199|ref|ZP_06346352.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium sp. M62/1] gi|291075160|gb|EFE12524.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium sp. M62/1] Length = 641 Score = 502 bits (1292), Expect = e-140, Method: Compositional matrix adjust. Identities = 269/622 (43%), Positives = 380/622 (61%), Gaps = 11/622 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +YD+ V+G GHAGCEAA AA+L T + T +I M CNP IGG KGHLVRE Sbjct: 4 LEETYDIAVVGAGHAGCEAALAAARLRMETVVFTVSVDSIALMPCNPNIGGSSKGHLVRE 63 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DAL G MG+ D IQ ++LN KGPAV R QAD+E+Y M+R + + E+L + Q Sbjct: 64 LDALGGEMGKNIDKTFIQSKMLNQSKGPAVHSLRAQADKEMYTREMRRVLENTEHLTIKQ 123 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 EV E+ ++ I ++ C VVL TGT+LR G + P G G +N Sbjct: 124 AEVTEILAEEGRVTGIRTLSGAVYHCRAVVLATGTYLRARCIYGDVSNPTGPNGLQAANH 183 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KITNRQIE 239 L +S + R KTGTPAR+D ++I + K E+QF D+R++PFSF TD + Q+ Sbjct: 184 LTDSLKALGIEMYRFKTGTPARVDRRSIDFSKMEEQFGDDRVVPFSFTTDPESVQKEQVS 243 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +T TN TH II EN+ S ++SG I+ GPRYCPSIEDK+V+F ++ HQ+F+EPEG Sbjct: 244 CWLTYTNERTHEIIRENLDRSPLFSGAIEGTGPRYCPSIEDKVVKFPDKERHQVFVEPEG 303 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T+ +Y G+S++LPE++Q RT+PGLE V I+R YAIEYD IN ++L TLE K Sbjct: 304 LYTNEMYLGGMSSSLPEDVQTAMYRTVPGLEHVKIVRNAYAIEYDCINSRQLRATLEFKA 363 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF GQ NG++GYEEAA QG +AG+N+ARK + I R+ +YIGV+IDDL +K Sbjct: 364 IEGLFSGGQFNGSSGYEEAAVQGFMAGVNAARKLQGKEGIVLDRSQAYIGVLIDDLVTKE 423 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRM TSRAEYR+ LR DNAD RL+ IG ++G I + R +R + Q+ +R ++ Sbjct: 424 SHEPYRMMTSRAEYRLLLRQDNADLRLSGIGHEIGLIDDERYERVLRKEQQ---IREEVE 480 Query: 480 SLVLTSKNLS-STSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVI 533 L T + K G T T E + P+ S + + I P V Sbjct: 481 RLNRTPVGATHEVQECLKSYGSTELKTGSTLAELVRRPELSYEAVKEIDPKRPVLDWDVA 540 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E++ I Y Y RQ+ + + K E R + + FDYS++ +L E +KL++ KP N+ Sbjct: 541 EQVNINIKYEGYIKRQLQQVAQFKKMESRKLDESFDYSTVKSLRKEAVQKLNLYKPRNIG 600 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I G++PA +++LL+++++ Sbjct: 601 QASRISGVSPADISVLLVHLEQ 622 >gi|322390498|ref|ZP_08064016.1| glucose inhibited division protein A [Streptococcus parasanguinis ATCC 903] gi|321142772|gb|EFX38232.1| glucose inhibited division protein A [Streptococcus parasanguinis ATCC 903] Length = 636 Score = 502 bits (1292), Expect = e-140, Method: Compositional matrix adjust. Identities = 262/615 (42%), Positives = 377/615 (61%), Gaps = 6/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DAL Sbjct: 9 YDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + D IQ ++LN KGPAVR R QAD+ELY M++ + +QENL + Q + Sbjct: 69 GGEMAKNIDKTYIQMKMLNTGKGPAVRALRAQADKELYSKEMRKTVENQENLTLRQTMID 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + V++TTGT LRG I IG LK +G S +L ++ Sbjct: 129 EILVENGKVVGVRTATHQEYGAKAVIVTTGTALRGEIIIGDLKYSSGPNHSLASINLADN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 + + GR KTGTP R+ +I +D+TE Q DE FS+ + + Q+ C +T Sbjct: 189 LKQLGLEIGRFKTGTPPRVKASSINYDETEIQPGDEAPNHFSYTSRDEDYVKDQVPCWLT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +H II N+ + +++G +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG NT+ Sbjct: 249 YTNGHSHEIIQNNLHRAPMFTGVVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRNTE 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE++Q + +I GLEK ++R GYAIEYD + P +L TLETKKISGL Sbjct: 309 EVYVQGLSTSLPEDVQRDLVHSIKGLEKAEMMRTGYAIEYDMVLPHQLRATLETKKISGL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMIDDL +KG +EP Sbjct: 369 FTAGQTNGTSGYEEAAGQGIIAGINAALKIQGKPELILKRSDGYIGVMIDDLVTKGTIEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF-AKYIQEYNFLRSL--LKS 480 YR+ TSRAEYR+ LR DNAD RLT +G +G + + R +RF K Q N ++ L +K Sbjct: 429 YRLLTSRAEYRLILRHDNADMRLTEMGRAIGLVDDERWQRFETKKYQFENEMKRLDSIKL 488 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQIE 539 + N ++ FK TA EFL P+ S Q++ I P A + +IE ++ E Sbjct: 489 KPVKETNEKVAAMGFKPLTDAVTAKEFLRRPEVSYQDVVEFIGPAAEELDDKIIELIETE 548 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + M + +++K E++ IP + D+ + +++ E ++K ++ P + QAS+I Sbjct: 549 IKYEGYISKAMDQVEKMKRMEEKRIPANIDWDDIDSIATEARQKFKLINPETIGQASRIS 608 Query: 600 GMTPAALNLLLIYIK 614 G+ PA +++L++Y++ Sbjct: 609 GVNPADISILMVYLE 623 >gi|28209870|ref|NP_780814.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium tetani E88] gi|73919634|sp|Q899S1|MNMG_CLOTE RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|28202305|gb|AAO34751.1| glucose inhibited division protein A [Clostridium tetani E88] Length = 623 Score = 502 bits (1292), Expect = e-140, Method: Compositional matrix adjust. Identities = 266/612 (43%), Positives = 377/612 (61%), Gaps = 3/612 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+V+G GHAGCEAA AA++G + T ++ M CNP IGG KGHLVREIDAL Sbjct: 8 YDVVVVGAGHAGCEAALAAARIGCKVLICTISLDSVALMPCNPNIGGTAKGHLVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG D IQ R+LN KGPAV R QAD+ Y M+ + ++EN+ + Q EV Sbjct: 68 GGEMGVNIDNTFIQSRMLNTSKGPAVHSLRAQADKSRYSNRMKYILENEENVTLKQIEVI 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + E + I+ ++ + TVVL TGT+L I IG++ G G P+ L + Sbjct: 128 SIDIENGKVKGILTKNGAYYNAKTVVLATGTYLNARIIIGEVAYSGGPNGLFPAKELTKN 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 M R KTGTPAR++ KTI + K +Q DE+++PFSF+TDK+ Q+ C +T T Sbjct: 188 LMDLGISIRRFKTGTPARVNKKTIDFSKMIEQPGDEKIVPFSFLTDKLEREQVSCYLTYT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N TH +I +N+ S +++G I+ G RYCPSIEDK+ RF ++N HQ+F+EPEG T+ + Sbjct: 248 NENTHEVIRKNLHRSPMFNGSIEGVGARYCPSIEDKVNRFPDKNKHQVFIEPEGEYTNEM 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y +G+S++LPEEIQ RT+PGLE V +R YAIEYD I+P+EL +LE+K I GLF Sbjct: 308 YVSGLSSSLPEEIQVAMYRTVPGLENVEFLRTAYAIEYDCIDPQELKLSLESKNIEGLFS 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 GQING++GYEEAAAQGL+AGIN+A K + D + +R+D YIGV+IDDL +KG EPYR Sbjct: 368 GGQINGSSGYEEAAAQGLIAGINAAMKVKEKDPLLLTRSDGYIGVLIDDLVTKGTNEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 M TSR+EYR+ LR NAD RLT G +G + E R KR+ + +K++ +T+ Sbjct: 428 MMTSRSEYRLLLRQGNADLRLTQKGYDVGLVSEERYKRYINRRESIKSEIERIKNVQITN 487 Query: 486 K---NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSY 542 K N S++ + K + YE + P+ + + V E + + Y Sbjct: 488 KKEVNEFLLSLNSSELKKPISLYELIKRPELDYYKVEQLDKGRINLPEDVQEEVNTTAKY 547 Query: 543 AAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMT 602 Y +Q+ + + K E +L+P D DYS + L E +KLS ++P N+ QAS+I G++ Sbjct: 548 EGYIEKQLEQVNQFKKFENKLLPNDIDYSKVYGLRIESVQKLSKIRPMNIGQASRISGVS 607 Query: 603 PAALNLLLIYIK 614 PA +++LLIY++ Sbjct: 608 PADISVLLIYLE 619 >gi|172037374|ref|YP_001803875.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cyanothece sp. ATCC 51142] gi|171698828|gb|ACB51809.1| glucose inhibited division protein A [Cyanothece sp. ATCC 51142] Length = 634 Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust. Identities = 267/620 (43%), Positives = 373/620 (60%), Gaps = 15/620 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 S+D+IV+G GH+GCEAA AA+LG T ++T I CNPA+GG K L E+DA Sbjct: 12 SFDIIVVGAGHSGCEAALAAARLGCRTLMLTLNLDRIAWQPCNPAVGGPAKSQLTHEVDA 71 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G +G++AD +Q RVLN +GPAV R Q D+ Y M+ + +QENL + +G V Sbjct: 72 LGGEIGKMADRTYLQKRVLNSSRGPAVWALRAQTDKREYSAVMKEIVENQENLSIREGMV 131 Query: 125 A----GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 G N E + I + V+LTTGTFL G I IG + AGR G+ + Sbjct: 132 TDLVLGNNDE---VIGIQTYFGTCFEAKAVILTTGTFLGGRIWIGNKSMEAGRAGEFAAV 188 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIE 239 L ++ F+TGRLKTGTPAR+D +++ + + E Q DE + FSF + +Q+ Sbjct: 189 GLTDTLNDLGFETGRLKTGTPARVDKRSVDYSQLEPQPPDEEVRWFSFDPYVWVEKKQMN 248 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +TRT +TH++I +N+ S IY G I S GPRYCPSIEDKIVRF ++ HQIF+EPEG Sbjct: 249 CYLTRTTSKTHQLIKDNLHLSPIYGGFIDSKGPRYCPSIEDKIVRFADKESHQIFIEPEG 308 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 +Y G ST LPE IQ +RT+PGLE ++RP YA+EYD++ + +PTL TKK Sbjct: 309 REIPELYIQGFSTGLPENIQLAMLRTLPGLENCVMLRPAYAVEYDFLPATQCYPTLMTKK 368 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQ+NGTTGYEEAAAQG+VAGIN+ + N + I F R +SY+G +IDDL +K Sbjct: 369 IQGLFCAGQVNGTTGYEEAAAQGIVAGINAVKFVNNEEMIIFPREESYLGTLIDDLCTKD 428 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 + EPYRM TSR+EYR+ LR DNAD R+TP+G K+G I +RR F + ++ N + + Sbjct: 429 LREPYRMLTSRSEYRLILRSDNADQRMTPLGRKIGLIDDRRWALFEQ--KQANIVAEKER 486 Query: 480 SLVLTSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIE 534 K +I D + + T + L P F Q+L + + + E Sbjct: 487 LYETRIKERDEVAIKIVNDTQQKIKGSATLADLLRRPKFHYQHLEQYGLGNKDLTIVEKE 546 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +I+ Y+ Y RQ I+ +I + +P D DY ++ LS E +EKL+ ++P L Q Sbjct: 547 GAEIDIKYSGYLKRQQIQIDQITRHSNKKLPSDLDYMTIDTLSMEAREKLTKVRPLTLGQ 606 Query: 595 ASKIEGMTPAALNLLLIYIK 614 AS+I G+ PA +N LL+Y++ Sbjct: 607 ASRIGGVNPADINALLVYLE 626 >gi|223933690|ref|ZP_03625666.1| glucose inhibited division protein A [Streptococcus suis 89/1591] gi|330833756|ref|YP_004402581.1| glucose inhibited division protein A [Streptococcus suis ST3] gi|223897643|gb|EEF64028.1| glucose inhibited division protein A [Streptococcus suis 89/1591] gi|329307979|gb|AEB82395.1| glucose inhibited division protein A [Streptococcus suis ST3] Length = 638 Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust. Identities = 268/616 (43%), Positives = 378/616 (61%), Gaps = 6/616 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIG GHAG EA A+++G T L T + M CNP+IGG KG +VREIDA Sbjct: 8 NYDVIVIGAGHAGVEAGLAASRMGCKTLLATINLDMVAFMPCNPSIGGSAKGIVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ ++LN+ KGPAVR R QAD+ Y M+R + QENL + Q + Sbjct: 68 LGGEMGRNIDKTYIQMKMLNMGKGPAVRALRAQADKAEYAAEMKRTVERQENLTLRQTMI 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + N VV+TTGT LRG I IG LK +G S +L + Sbjct: 128 DEILVEDGKVIGVRTATNQKFSAKAVVVTTGTALRGEIIIGDLKYSSGPNNSLASITLAD 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGI 242 + + + GR KTGTP R++ +TI +++TE Q DE+ FSF++ + QI C + Sbjct: 188 NLKELGLEIGRFKTGTPPRVNARTINYEETEIQPDDEKPNHFSFLSKDEDYLQDQIPCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +H II N+ + ++SG +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG NT Sbjct: 248 TYTNATSHEIINSNLHRAPMFSGIVKGIGPRYCPSIEDKIVRFADKERHQLFLEPEGRNT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 D +Y G+ST+LPE++Q I +I GLE ++R GYAIEYD + P +L TLETKKISG Sbjct: 308 DEIYVQGLSTSLPEDVQQDLIHSIKGLENAQMMRTGYAIEYDMVMPHQLRATLETKKISG 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQ NGT+GYEEAA QG+VAGIN+A K + R+D YIGVMIDDL +KG +E Sbjct: 368 LFTAGQTNGTSGYEEAAGQGIVAGINAALKVQGKPELILKRSDGYIGVMIDDLVTKGTVE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYR+ TSRAEYR+ LR DNAD RLT IG ++G + + R + F + +++ L+S+ Sbjct: 428 PYRLLTSRAEYRLILRHDNADMRLTEIGRQVGLVDDERWQVFQIHKNQFDNEMKRLESIK 487 Query: 483 L---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQI 538 L N ++ FK TA EF+ PD + + + I P A + IE ++ Sbjct: 488 LKPIKETNEKVVAMGFKPLTDALTAKEFMRRPDVTYADAVAFIGPAAEDLDAKTIELIET 547 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E Y Y + + + +++K E++ IP D D+ + +++ E ++K ++ P + QAS+I Sbjct: 548 EVKYEGYIAKALDQVEKMKRMEEKRIPADIDWDDIDSIATEARQKFKLISPETIGQASRI 607 Query: 599 EGMTPAALNLLLIYIK 614 G+ PA +++L++Y++ Sbjct: 608 SGVNPADISILMVYLE 623 >gi|256545943|ref|ZP_05473298.1| glucose inhibited division protein A [Anaerococcus vaginalis ATCC 51170] gi|256398365|gb|EEU11987.1| glucose inhibited division protein A [Anaerococcus vaginalis ATCC 51170] Length = 639 Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust. Identities = 262/619 (42%), Positives = 377/619 (60%), Gaps = 6/619 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 I+ +YDV+V+G GHAGCEA +A+LG T ++T ++ M CNP IGG GKGH+VRE Sbjct: 15 IDEAYDVVVVGAGHAGCEAGLASARLGFKTLVLTTSMESVADMPCNPNIGGTGKGHIVRE 74 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M D IQ R+LN KGPAV R QAD+ Y M++ + +QENLD+ + Sbjct: 75 IDALGGEMAINIDKTFIQSRMLNTSKGPAVHSLRVQADKIKYHQEMKKTLENQENLDLFE 134 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 EV N E + S+ ++ V+ TGT+L G I +G + +G G S + Sbjct: 135 QEVDKINIEDGKVKSVETIQGAIFPTKACVVCTGTYLNGKILMGDFQKTSGPHGLSAATH 194 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT---DKITNRQI 238 L +S + F R KTGTPAR+D K++ KTE Q DE ++ FSF+ D +Q Sbjct: 195 LSDSLEQLGFSLRRFKTGTPARVDKKSLDLSKTEIQKGDENVVAFSFLNEDKDFSDKKQE 254 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C +T T +T IIMEN+ S +Y+G +K GPRYCPSIEDK+VRF +R+ HQ+F+EPE Sbjct: 255 ACYLTYTTEKTKEIIMENLDRSPMYAGLVKGIGPRYCPSIEDKMVRFPDRDIHQVFIEPE 314 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 L+TD +Y G+S+ LP+E+Q +F +TI GLE IIRP Y IEYD ++ L +LE+K Sbjct: 315 SLSTDEMYIQGVSSTLPQEVQKEFYKTIEGLENCKIIRPAYGIEYDCLDSTNLKRSLESK 374 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 +I LF AGQING++GYEEAA QGL+AGIN+A K D + R+D+YIGV+IDDL +K Sbjct: 375 EIENLFFAGQINGSSGYEEAAGQGLIAGINAALKLRGEDALILDRSDAYIGVLIDDLVTK 434 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYRM TSR EYR+++R DNAD RLT G ++G + + R ++ + S L Sbjct: 435 GTNEPYRMMTSRCEYRLTMRQDNADFRLTEKGHEIGLVSDERYEKMVVKRENIEKEISRL 494 Query: 479 KSLVLTSKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSICPDARKFSSLVIER 535 K+++++ ++ + +T Y + + P+ + + L + PD + + Sbjct: 495 KNVMISPNEENNEILEKIGSNPIKTGYSLFDLIKRPELTYKKLEVLDPDRPELPKFQQIQ 554 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 +Q E Y Y +QM + + K E + + D DYS + L E EKL+ +KP ++ QA Sbjct: 555 VQTEIKYQGYIKKQMADIGKFKKLENKKLDHDIDYSKINGLKKESAEKLNKIKPDSIGQA 614 Query: 596 SKIEGMTPAALNLLLIYIK 614 S+I G++PA +N+LLI +K Sbjct: 615 SRISGVSPADINVLLIRLK 633 >gi|24380471|ref|NP_722426.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus mutans UA159] gi|81170580|sp|Q8DRS6|MNMG_STRMU RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|24378501|gb|AAN59732.1|AE015035_1 glucose inhibited division protein-like protein GidA [Streptococcus mutans UA159] Length = 631 Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust. Identities = 270/619 (43%), Positives = 380/619 (61%), Gaps = 12/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIG GHAG EA+ +++G T L T + M CNP+IGG KG +VREIDA Sbjct: 8 NYDVIVIGAGHAGVEASLATSRMGCKTLLATINLEMLAFMPCNPSIGGSAKGIVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D + IQ R+LN KGPAVR R QAD+ LY M+ + QENL + Q + Sbjct: 68 LGGEMGKNIDKSYIQMRMLNTGKGPAVRALRAQADKALYARNMKHTVEQQENLTLRQSMI 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + N V++TTGT LRG I +G+LK +G S +L + Sbjct: 128 DEILVEDGKVIGVRTATNQKYSAQAVIVTTGTALRGEIILGELKYSSGPNNSLASVTLAD 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGI 242 + + GR KTGTP R+ +I +D+TE Q D++ FSFM+ + QI C + Sbjct: 188 NLRDLGLEIGRFKTGTPPRVKANSIHYDETEIQPGDKKANHFSFMSKDEDYLKDQIPCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +H II +N+ + ++SG +K GPRYCPSIEDKIVRF +++ HQ+FLEPEG T Sbjct: 248 TYTNQSSHDIINKNLYRAPMFSGIVKGVGPRYCPSIEDKIVRFADKDRHQLFLEPEGRET 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q + +I GLE ++R GYAIEYD + P +L TLETKKISG Sbjct: 308 EEVYIQGLSTSLPEDVQKDVVHSIKGLENAEMMRTGYAIEYDIVLPHQLRATLETKKISG 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQ NGT+GYEEAA QG+VAGIN+A K + R+D+YIGVMIDDL +KG LE Sbjct: 368 LFTAGQTNGTSGYEEAAGQGIVAGINAALKIQGKPELILKRSDAYIGVMIDDLVTKGTLE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFA----KYIQEYNFLRSL- 477 PYR+ TSRAEYR+ LR DNAD RLT IG ++G + E R RF ++ E L S+ Sbjct: 428 PYRLLTSRAEYRLILRHDNADLRLTEIGHQVGLVNEERYMRFQIRKNQFDNELTRLSSIK 487 Query: 478 LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPD--FSIQNLFSICPDARKFSSLVIER 535 LK + +K + + FK TA EF+ P+ ++I F + P A VIE Sbjct: 488 LKPVAEINKRIE--ELGFKPLTDALTAKEFMRRPEINYAIATSF-VGPAAESLDEKVIEL 544 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 L+ E Y Y + + + ++K E++ IPK+ D+ ++ +++ E ++K + P + QA Sbjct: 545 LETEIKYEGYINKALDQVAKMKRMEEKRIPKNIDWDAIDSIATEARQKFKKINPETIGQA 604 Query: 596 SKIEGMTPAALNLLLIYIK 614 S+I G+ PA +++L++Y++ Sbjct: 605 SRISGVNPADISILMVYLE 623 >gi|332365069|gb|EGJ42834.1| glucose inhibited division protein A [Streptococcus sanguinis SK355] Length = 635 Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust. Identities = 264/626 (42%), Positives = 382/626 (61%), Gaps = 26/626 (4%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYD+IVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DA Sbjct: 8 SYDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M + D + IQ ++LN KGPAVR R QAD+E+Y M++ + +QENL + Q Sbjct: 68 LGGEMAKNIDKSYIQMKMLNTGKGPAVRALRAQADKEVYSKEMRKTVENQENLTLRQ--- 124 Query: 125 AGFNTEKNIISSIVMQDNSMIRCST----------VVLTTGTFLRGVIHIGKLKIPAGRM 174 +I+ I+++D +I T V++TTGT LRG I IG LK +G Sbjct: 125 -------TMINEILVEDGKVIGVKTATHQEYAAKAVIVTTGTALRGEIIIGDLKYSSGPN 177 Query: 175 GDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DK 232 + L ++ F+ GR KTGTP R+ +I +D TE Q DE+ FS+ + + Sbjct: 178 HSLAAIPLADNLRDLGFEIGRFKTGTPPRVKASSINYDVTEIQPGDEKANHFSYTSRDED 237 Query: 233 ITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQ 292 Q+ C +T TN E+H II N+ + ++SG +K GPRYCPSIEDKIVRF ++ HQ Sbjct: 238 YVKDQVPCWLTYTNAESHEIIQNNLHRAPMFSGVVKGVGPRYCPSIEDKIVRFADKERHQ 297 Query: 293 IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF 352 +FLEPEG +T+ VY G+ST+LPE++Q + +I GLE ++R GYAIEYD I P +L Sbjct: 298 LFLEPEGRDTEEVYVQGLSTSLPEDVQKDLVHSIKGLENAEMMRTGYAIEYDMIMPHQLR 357 Query: 353 PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMI 412 TLETKKISGLF AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMI Sbjct: 358 ATLETKKISGLFTAGQTNGTSGYEEAAGQGIIAGINAALKIQGKPELILKRSDGYIGVMI 417 Query: 413 DDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYN 472 DDL +KG +EPYR+ TSRAEYR+ LR DNAD RLT +G ++G + + R RF +++ Sbjct: 418 DDLVTKGTVEPYRLLTSRAEYRLILRHDNADMRLTELGREIGLVDDERWARFEIKKNQFD 477 Query: 473 FLRSLLKSLVL---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKF 528 L+S+ L N ++ FK TA EF+ P+ S Q++ I P A + Sbjct: 478 NEMKRLESIKLKPVKETNAKVEALGFKPLTDAVTAKEFIRRPEVSYQDVVQFIGPAAEEL 537 Query: 529 SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 +IE L+ E Y Y + + + +++K E++ IP + D+ + +++ E ++K + Sbjct: 538 DEKIIELLETEIKYEGYISKALDQVEKMKRMEEKRIPANIDWDDIDSIATEARQKFKKIN 597 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIK 614 P + QAS+I G+ PA +++L++Y++ Sbjct: 598 PETIGQASRISGVNPADISILMVYLE 623 >gi|325686452|gb|EGD28481.1| glucose inhibited division protein A [Streptococcus sanguinis SK72] Length = 635 Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust. Identities = 263/626 (42%), Positives = 382/626 (61%), Gaps = 26/626 (4%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYD++VIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DA Sbjct: 8 SYDIVVIGAGHAGVEASLAASRMGCKVLLATLNIEMLAFMPCNPSIGGSAKGIVVREVDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M + D + IQ ++LN KGPAVR R QAD+ELY M++ + +QENL + Q Sbjct: 68 LGGEMAKNIDKSYIQMKMLNTGKGPAVRALRAQADKELYSKEMRKTVENQENLTLRQ--- 124 Query: 125 AGFNTEKNIISSIVMQDNSMIRCST----------VVLTTGTFLRGVIHIGKLKIPAGRM 174 +I+ I+++D +I T V++TTGT LRG I IG LK +G Sbjct: 125 -------TMINEILVEDGKVIGVKTATHQEYAAKAVIVTTGTALRGEIIIGDLKYSSGPN 177 Query: 175 GDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DK 232 + L ++ F+ GR KTGTP R+ +I +D TE Q DE+ FS+ + + Sbjct: 178 HSLAAIPLADNLRDLGFEIGRFKTGTPPRVKASSINYDVTEIQPGDEKANHFSYTSRDED 237 Query: 233 ITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQ 292 Q+ C +T TN E+H II N+ + ++SG +K GPRYCPSIEDKIVRF ++ HQ Sbjct: 238 YVKDQVPCWLTYTNAESHEIIQNNLHRAPMFSGIVKGVGPRYCPSIEDKIVRFADKERHQ 297 Query: 293 IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF 352 +FLEPEG +T+ VY G+ST+LPE++Q + +I GLE ++R GYAIEYD I P +L Sbjct: 298 LFLEPEGRDTEEVYVQGLSTSLPEDVQKDLVHSIKGLENAEMMRTGYAIEYDMIMPHQLR 357 Query: 353 PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMI 412 TLETKKISGLF AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMI Sbjct: 358 ATLETKKISGLFTAGQTNGTSGYEEAAGQGIIAGINAALKIQGKPELILKRSDGYIGVMI 417 Query: 413 DDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYN 472 DDL +KG +EPYR+ TSRAEYR+ LR DNAD RLT +G ++G + + R RF +++ Sbjct: 418 DDLVTKGTVEPYRLLTSRAEYRLILRHDNADMRLTEMGREIGLVDDERWARFEIKKNQFD 477 Query: 473 FLRSLLKSLVL---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKF 528 L+S+ L N ++ FK TA EF+ P+ S Q++ I P A + Sbjct: 478 NEMKRLESIKLKPVKETNAKVEALGFKPLTDAVTAKEFMRRPEVSYQDVVQFIGPAAEEL 537 Query: 529 SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 +IE ++ E Y Y + + + +++K E++ IP + D+ + +++ E ++K + Sbjct: 538 DEKIIELIETEIKYEGYISKALDQVEKMKRMEEKRIPANIDWDDIDSIATEARQKFKKIN 597 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIK 614 P + QAS+I G+ PA +++L++Y++ Sbjct: 598 PETIGQASRISGVNPADISILMVYLE 623 >gi|306826060|ref|ZP_07459396.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304431776|gb|EFM34756.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 637 Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust. Identities = 262/617 (42%), Positives = 376/617 (60%), Gaps = 10/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DAL Sbjct: 9 YDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + D IQ ++LN KGPAVR R QAD+ELY M++ + +QENL + Q + Sbjct: 69 GGEMAKTIDKTYIQMKMLNTGKGPAVRALRAQADKELYSKEMRKTVENQENLTLRQTMID 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + V++TTGT LRG I IG LK +G S +L ++ Sbjct: 129 EILVEDGKVVGVRTATHQEYAAKAVIVTTGTALRGEIIIGDLKYSSGPNHSLASINLADN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 K + GR KTGTP R+ +I +D TE Q DE FS+ + + Q+ C +T Sbjct: 189 LKKLGLEIGRFKTGTPPRVKASSINYDVTEIQPGDEAPNHFSYTSRDEDYVKDQVPCWLT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +H II N+ + +++G +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG NT+ Sbjct: 249 YTNGTSHEIIQNNLHRAPMFTGVVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRNTE 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE++Q + + +I GLE ++R GYAIEYD + P +L TLETKKISGL Sbjct: 309 EVYVQGLSTSLPEDVQRELVHSIKGLENAEMMRTGYAIEYDMVLPHQLRATLETKKISGL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMIDDL +KG +EP Sbjct: 369 FTAGQTNGTSGYEEAAGQGIIAGINAALKIQGKPELILKRSDGYIGVMIDDLVTKGTIEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G ++G + + R RF I++ F +L+ + Sbjct: 429 YRLLTSRAEYRLILRHDNADMRLTEMGREIGLVDDERWARFE--IKKNQFDNEMLRLDSI 486 Query: 484 TSKNLSST-----SISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQ 537 K + T ++ FK TA EFL P+ S Q++ + I P A VIE ++ Sbjct: 487 KLKPVQETNAKVEAMGFKPLTDAVTAKEFLRRPEVSYQDVVAFIGPAAEDLDDKVIELIE 546 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 E Y Y + M + ++K E++ IP + D+ + +++ E ++K ++ P + QAS+ Sbjct: 547 TEIKYEGYISKAMDQVAKMKRMEEKRIPANIDWDDIDSIATEARQKFKVINPETIGQASR 606 Query: 598 IEGMTPAALNLLLIYIK 614 I G+ PA +++L++Y++ Sbjct: 607 ISGVNPADISILMVYLE 623 >gi|312866771|ref|ZP_07726984.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus parasanguinis F0405] gi|311097554|gb|EFQ55785.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus parasanguinis F0405] Length = 636 Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust. Identities = 262/615 (42%), Positives = 377/615 (61%), Gaps = 6/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DAL Sbjct: 9 YDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + D IQ ++LN KGPAVR R QAD+ELY M++ + +QENL + Q + Sbjct: 69 GGEMAKNIDKTYIQMKMLNTGKGPAVRALRAQADKELYSKEMRKTVENQENLTLRQTMID 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + V++TTGT LRG I IG LK +G S +L ++ Sbjct: 129 EILVENGKVIGVRTATHQEYGAKAVIVTTGTALRGEIIIGDLKYSSGPNHSLASINLADN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 + + GR KTGTP R+ +I +D+TE Q DE FS+ + + Q+ C +T Sbjct: 189 LKQLGLEIGRFKTGTPPRVKASSINYDETEIQPGDEAPNHFSYTSRDEDYVKDQVPCWLT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +H II N+ + +++G +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG NT+ Sbjct: 249 YTNGHSHEIIQNNLHRAPMFTGVVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRNTE 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE++Q + +I GLEK ++R GYAIEYD + P +L TLETKKISGL Sbjct: 309 EVYVQGLSTSLPEDVQRDLVHSIKGLEKAEMMRTGYAIEYDMVLPHQLRATLETKKISGL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMIDDL +KG +EP Sbjct: 369 FTAGQTNGTSGYEEAAGQGIIAGINAALKIQGKPELILKRSDGYIGVMIDDLVTKGTIEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF-AKYIQEYNFLRSL--LKS 480 YR+ TSRAEYR+ LR DNAD RLT +G +G + + R +RF K Q N ++ L +K Sbjct: 429 YRLLTSRAEYRLILRHDNADMRLTEMGRAIGLVDDERWQRFETKKYQFENEMKRLDSIKL 488 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQIE 539 + N ++ FK TA EFL P+ S Q++ I P A + +IE ++ E Sbjct: 489 KPVKETNEKVAAMGFKPLTDAVTAKEFLRRPEVSYQDVVEFIGPAAEELDDKIIELIETE 548 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + M + +++K E++ IP + D+ + +++ E ++K ++ P + QAS+I Sbjct: 549 IKYEGYISKAMDQVEKMKRMEEKRIPANIDWDDIDSIATEARQKFKLINPETIGQASRIS 608 Query: 600 GMTPAALNLLLIYIK 614 G+ PA +++L++Y++ Sbjct: 609 GVNPADISILMVYLE 623 >gi|325698057|gb|EGD39938.1| glucose inhibited division protein A [Streptococcus sanguinis SK160] gi|327463810|gb|EGF10126.1| glucose inhibited division protein A [Streptococcus sanguinis SK1057] gi|332359521|gb|EGJ37340.1| glucose inhibited division protein A [Streptococcus sanguinis SK1056] Length = 659 Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust. Identities = 264/626 (42%), Positives = 382/626 (61%), Gaps = 26/626 (4%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYD+IVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DA Sbjct: 32 SYDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDA 91 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M + D + IQ ++LN KGPAVR R QAD+ELY M++ + +QENL + Q Sbjct: 92 LGGEMAKNIDKSYIQMKMLNTGKGPAVRALRAQADKELYSKEMRKTVENQENLTLRQ--- 148 Query: 125 AGFNTEKNIISSIVMQDNSMIRCST----------VVLTTGTFLRGVIHIGKLKIPAGRM 174 +I+ I+++D +I T V++TTGT LRG I IG LK +G Sbjct: 149 -------TMINEILVEDGKVIGVKTATHQEYAAKAVIVTTGTALRGEIIIGDLKYSSGPN 201 Query: 175 GDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DK 232 + L ++ F+ GR KTGTP R+ +I +D TE Q DE+ FS+ + + Sbjct: 202 HSLAAIPLADNLRDLGFEIGRFKTGTPPRVKASSINYDVTEIQPGDEKANHFSYTSRDED 261 Query: 233 ITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQ 292 Q+ C +T TN E+H II N+ + ++SG +K GPRYCPSIEDKIVRF ++ HQ Sbjct: 262 YVKDQVPCWLTYTNAESHEIIQNNLHRAPMFSGIVKGVGPRYCPSIEDKIVRFADKERHQ 321 Query: 293 IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF 352 +FLEPEG +T+ VY G+ST+LPE++Q + +I GLE ++R GYAIEYD I P +L Sbjct: 322 LFLEPEGRDTEEVYVQGLSTSLPEDVQKDLVHSIKGLENAEMMRTGYAIEYDMIMPHQLR 381 Query: 353 PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMI 412 TLETKKISGLF AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMI Sbjct: 382 ATLETKKISGLFTAGQTNGTSGYEEAAGQGIIAGINAALKIQGKPELILKRSDGYIGVMI 441 Query: 413 DDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYN 472 DDL +KG +EPYR+ TSRAEYR+ LR DNAD RLT +G ++G + + R RF +++ Sbjct: 442 DDLVTKGTVEPYRLLTSRAEYRLILRHDNADMRLTEMGREIGLVDDERWARFEIKKNQFD 501 Query: 473 FLRSLLKSLVL---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKF 528 L+S+ L N ++ FK TA EF+ P+ S Q++ I P A + Sbjct: 502 NEMKRLESIKLKPVKETNAKVEALGFKPLTDAVTAKEFMRRPEVSYQDVVQFIGPAAEEL 561 Query: 529 SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 +IE ++ E Y Y + + + +++K E++ IP + D+ + +++ E ++K + Sbjct: 562 DEKIIELIETEIKYEGYISKALDQVEKMKRMEEKRIPANIDWDDIDSIATEARQKFKKIN 621 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIK 614 P + QAS+I G+ PA +++L++Y++ Sbjct: 622 PETIGQASRISGVNPADISILMVYLE 647 >gi|323350803|ref|ZP_08086462.1| glucose inhibited division protein A [Streptococcus sanguinis VMC66] gi|322122977|gb|EFX94680.1| glucose inhibited division protein A [Streptococcus sanguinis VMC66] Length = 635 Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust. Identities = 264/626 (42%), Positives = 382/626 (61%), Gaps = 26/626 (4%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYD+IVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DA Sbjct: 8 SYDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M + D + IQ ++LN KGPAVR R QAD+E+Y M++ + +QENL + Q Sbjct: 68 LGGEMAKNIDKSYIQMKMLNTGKGPAVRALRAQADKEVYSKEMRKTVENQENLTLRQ--- 124 Query: 125 AGFNTEKNIISSIVMQDNSMIRCST----------VVLTTGTFLRGVIHIGKLKIPAGRM 174 +I+ I+++D +I T V++TTGT LRG I IG LK +G Sbjct: 125 -------TMINEILVEDGKVIGVKTATHQEYAAKAVIVTTGTALRGEIIIGDLKYSSGPN 177 Query: 175 GDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DK 232 + L ++ F+ GR KTGTP R+ +I +D TE Q DE+ FS+ + + Sbjct: 178 HSLAAIPLADNLRDLGFEIGRFKTGTPPRVKASSINYDVTEIQPGDEKANHFSYTSRDED 237 Query: 233 ITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQ 292 Q+ C +T TN E+H II N+ + ++SG +K GPRYCPSIEDKIVRF ++ HQ Sbjct: 238 YVKDQVPCWLTYTNAESHEIIQNNLHRAPMFSGIVKGVGPRYCPSIEDKIVRFADKERHQ 297 Query: 293 IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF 352 +FLEPEG +T+ VY G+ST+LPE++Q + +I GLE ++R GYAIEYD I P +L Sbjct: 298 LFLEPEGRDTEEVYVQGLSTSLPEDVQKDLVHSIKGLENAEMMRTGYAIEYDMIMPHQLR 357 Query: 353 PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMI 412 TLETKKISGLF AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMI Sbjct: 358 ATLETKKISGLFTAGQTNGTSGYEEAAGQGIIAGINAALKIQGKPELILKRSDGYIGVMI 417 Query: 413 DDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYN 472 DDL +KG +EPYR+ TSRAEYR+ LR DNAD RLT +G ++G + + R RF +++ Sbjct: 418 DDLVTKGTVEPYRLLTSRAEYRLILRHDNADMRLTELGREIGLVDDERWARFEIKKNQFD 477 Query: 473 FLRSLLKSLVL---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKF 528 L+S+ L N ++ FK TA EF+ P+ S Q++ I P A + Sbjct: 478 NEMKRLESIKLKPVKETNAKVEALGFKPLTDAVTAKEFIRRPEVSYQDVVQFIGPAAEEL 537 Query: 529 SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 +IE L+ E Y Y + + + +++K E++ IP + D+ + +++ E ++K + Sbjct: 538 DEKIIELLETEIKYEGYISKALDQVEKMKRMEEKRIPANIDWDDIDSIATEARQKFKKIN 597 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIK 614 P + QAS+I G+ PA +++L++Y++ Sbjct: 598 PETIGQASRISGVNPADISILMVYLE 623 >gi|12859113|dbj|BAB31540.1| unnamed protein product [Mus musculus] Length = 669 Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust. Identities = 284/630 (45%), Positives = 404/630 (64%), Gaps = 25/630 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DV+VIGGGHAG EAAA AA+ G+ T L+TH+ TIG MSCNP+ GG+GKGHL+RE+DAL Sbjct: 36 FDVVVIGGGHAGTEAAAAAARCGSRTLLLTHRVDTIGQMSCNPSFGGIGKGHLMREVDAL 95 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGL R+ D +GI ++VLN +KGPAV G R Q DR+LY+ MQ+EILS L V +G V Sbjct: 96 DGLCSRICDQSGIHYKVLNRRKGPAVWGLRAQIDRKLYKQNMQKEILSTPLLTVQKGAVE 155 Query: 126 GFNTE--------KNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 K+ + +V+ D S I +V+LTTGTFLRG+I IG PAGR+GD Sbjct: 156 DLVLAEPEPGYPGKSRVRGVVLADGSTIYAESVILTTGTFLRGMIIIGLEMHPAGRLGDQ 215 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR- 236 PS L + K F GRLKTGTP RL ++I + K D+ IPFSF++D + + Sbjct: 216 PSIGLAQTLEKLGFMVGRLKTGTPPRLGKESINFSILNKHTPDDPSIPFSFLSDSVWIKP 275 Query: 237 --QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 Q+ C +T TN I++EN+ ++ K GPRYCPSIE K++RF R HQ++ Sbjct: 276 EDQLPCYLTHTNPRVDAIVLENLHLNSHVQETTK--GPRYCPSIESKVLRFPNRL-HQVW 332 Query: 295 LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT 354 LEPEG+++D++YP G+S LP E+Q + I I GLEK ++ PGY ++YDY++P+++ P+ Sbjct: 333 LEPEGMDSDLIYPQGLSVTLPAELQEKMITCIRGLEKAKMVHPGYGVQYDYLDPRQISPS 392 Query: 355 LETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDD 414 LET + LF AGQINGTTGYEEAAAQG++AGIN++ + ++ SRT+ YIGV+IDD Sbjct: 393 LETHLVQRLFFAGQINGTTGYEEAAAQGVIAGINASLRVSRKPPFVVSRTEGYIGVLIDD 452 Query: 415 LTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMK-LGCIGERRQKRFAKYIQEYNF 473 LT+ G EPYRMFTSR E+R+SLRPDNAD RLT K GC+ +R +R Sbjct: 453 LTTLGTSEPYRMFTSRVEFRLSLRPDNADTRLTFRAHKEAGCVSSQRFERALWMKSSLEE 512 Query: 474 LRSLLKSLVLTS----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA-RKF 528 S+LKS+ +S K + IS + +A + L Y + +++L + P+ K+ Sbjct: 513 GISVLKSIKFSSSKWKKLIPQIPISINRSLPV-SALDVLKYEEVDMESLVGVLPEPLEKY 571 Query: 529 SSL--VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSL--PALSNELKEKL 584 ++ + RL+IE+SY + Q+ E KE+ +E +P + DY ++ +LS E++EKL Sbjct: 572 TACRELARRLKIEASYESVLSYQLQEIKEVHQDEALQLPHELDYLTIRDVSLSQEVREKL 631 Query: 585 SILKPFNLLQASKIEGMTPAALNLLLIYIK 614 + +P + AS+I G+TPAA+ LL +++ Sbjct: 632 HLSRPQTIGAASRIPGVTPAAIINLLRFVR 661 >gi|331089220|ref|ZP_08338122.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Lachnospiraceae bacterium 3_1_46FAA] gi|330405772|gb|EGG85301.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Lachnospiraceae bacterium 3_1_46FAA] Length = 636 Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust. Identities = 266/622 (42%), Positives = 382/622 (61%), Gaps = 17/622 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+ V+G GHAGCEAA A+LG T + T +I M CNP IGG KGHLV+EIDAL Sbjct: 15 YDIAVVGAGHAGCEAALACARLGFKTVMFTVSVDSIALMPCNPNIGGSSKGHLVKEIDAL 74 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV- 124 G MG+V D IQ ++LN KGPAV R QAD+ Y M+R + Q+NLD+ Q EV Sbjct: 75 GGEMGKVIDKTFIQSKMLNQSKGPAVHSLRAQADKSDYSKEMRRVLEEQDNLDIRQMEVT 134 Query: 125 ---AGFNTEKNI--ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 A E I I + ++ C V+L TGT+L+ G++ G G + Sbjct: 135 DIIADDPNESGIRKIKGVQTYSGAIYPCKAVILCTGTYLKARCIYGEISTQTGPNGLQSA 194 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KITNRQ 237 N L +S R KTGTPAR+D +I + K E+Q DER++PFSF TD + Q Sbjct: 195 NYLTDSLKSLGIKMYRFKTGTPARIDKNSIDFTKMEEQKGDERVVPFSFTTDPEDVQIDQ 254 Query: 238 IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 + C +T TN TH II EN+ S ++SG I+ GPRYCPSIEDK+V+F ++N HQ+F+EP Sbjct: 255 VSCWLTYTNETTHEIIRENLDRSPLFSGAIEGTGPRYCPSIEDKVVKFPDKNRHQVFIEP 314 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EG++T+ +Y G+S++LPE++Q+ R++PGLE I+R YAIEYD I+ ++L TLE Sbjct: 315 EGIHTNEMYVGGMSSSLPEDVQYAMYRSVPGLEHAKIVRNAYAIEYDCIDARQLKSTLEF 374 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 K I GLF GQ NG++GYEEAAAQG+VAGIN+ARK + I R+ YIGV+IDDL + Sbjct: 375 KNIEGLFSGGQFNGSSGYEEAAAQGIVAGINAARKLQGKEGIVIDRSQGYIGVLIDDLVT 434 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL 477 K EPYRM TSRAEYR+ LR DNAD RLT +G ++G I E +R+ K +++ + Sbjct: 435 KESREPYRMMTSRAEYRLLLRQDNADQRLTKLGYEIGLISE---ERYEKLLEKERLIEEE 491 Query: 478 LKSL----VLTSKNLSSTSISFKQDGKTR--TAYEFLSYPDFSIQNLFSICPDARKFSSL 531 + + + TS+ + + +++ T T E + P+ S + L I + + Sbjct: 492 IHRVERVNIGTSEEVQNLLKTYESTPLTSGTTLAELIRRPELSYEKLAPIDKNRKNLPGD 551 Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 V +++ I Y Y RQM + ++ K E + IP+D +Y + +L E K+KL+ ++P + Sbjct: 552 VAQQVDINIKYDGYIKRQMRQVEQFKKLENKKIPEDINYDEIKSLRIEAKQKLNQIRPAS 611 Query: 592 LLQASKIEGMTPAALNLLLIYI 613 + QAS+I G++PA +++LL+Y+ Sbjct: 612 IGQASRISGVSPADVSVLLVYL 633 >gi|148243498|ref|YP_001228655.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Synechococcus sp. RCC307] gi|166224334|sp|A5GWP3|MNMG_SYNR3 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|147851808|emb|CAK29302.1| Glucose inhibited division protein A [Synechococcus sp. RCC307] Length = 643 Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust. Identities = 263/621 (42%), Positives = 379/621 (61%), Gaps = 12/621 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 S+++IV+GGGHAGCEAA AA+LG STAL + I CNPA+GG K LV E+DA Sbjct: 10 SFELIVVGGGHAGCEAALTAARLGISTALFSLNLDRIAWQPCNPAVGGPAKSQLVHEVDA 69 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G++GR+ADA +Q RVLN +GPAV R Q D+ Y M + + NL + + V Sbjct: 70 LGGVIGRLADATALQKRVLNASRGPAVWALRAQTDKRQYARQMLQLLQHTPNLALREAMV 129 Query: 125 AGFNTEKNI------ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSP 178 G T + I+ + S+ VVLTTGTFL G I +G +PAGR G+ P Sbjct: 130 TGLETSGSAESGDLRITGVRTYFGSIYNAQAVVLTTGTFLGGRIWVGNQSMPAGRAGEQP 189 Query: 179 SNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK-ITNRQ 237 + L + F T RLKTGTPAR+D +++ + E+Q +D FSF + +++ Sbjct: 190 AEGLTEALQALGFATDRLKTGTPARVDRRSVALETLEEQPSDAHERWFSFDPEAWVSSEP 249 Query: 238 IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 + C ITRT TH++I +N+ + IY G I S GPRYCPSIEDKIVRF +++ HQIFLEP Sbjct: 250 MSCHITRTTAATHQLIKDNLHLTPIYGGFIDSKGPRYCPSIEDKIVRFADKDSHQIFLEP 309 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EG +T +Y G ST LPE +Q + +RT+PGLE+ ++RP Y +EYDY+ +L P+L+T Sbjct: 310 EGRDTPELYIQGFSTGLPERLQLKLLRTLPGLEQCVMLRPAYNVEYDYLPATQLLPSLQT 369 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 K+++GLF AGQ+NGTTGYEEAAAQGLVAG+N+ R + F R SYIG +IDDL + Sbjct: 370 KRVAGLFSAGQLNGTTGYEEAAAQGLVAGLNAVRLIRGQTPVHFPREGSYIGTLIDDLVT 429 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL 477 K + EPYR+ TSR+EYR+ LR DNAD RLTP+ +LG I RR + + + + Sbjct: 430 KDLREPYRVLTSRSEYRLVLRGDNADRRLTPLARELGLIDARRWQIYERKQEGIAAETKR 489 Query: 478 LKSLVLTSKNLSSTSISFKQDGK----TRTAYEFLSYPDFSIQNLFSICPDARKFSSLVI 533 L+++ L + + ++ +Q G + T + L P F +L + V Sbjct: 490 LETVRLKVSDPVAPAV-VEQTGAAIKGSITLADLLRRPGFHSNDLVRHGLADGELPVDVR 548 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E +I+ Y+ Y RQ + + ++ + +RLIP D+ S+ LS E +E+L+ +P NL Sbjct: 549 EGAEIDVKYSGYLARQTQQIERVQRQGQRLIPSGIDFYSITTLSREARERLTAAQPLNLG 608 Query: 594 QASKIEGMTPAALNLLLIYIK 614 QAS++ G++PA + LL++++ Sbjct: 609 QASRLPGVSPADVTALLLWLE 629 >gi|157149984|ref|YP_001449347.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus gordonii str. Challis substr. CH1] gi|189039364|sp|A8AU87|MNMG_STRGC RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|157074778|gb|ABV09461.1| glucose inhibited division protein A [Streptococcus gordonii str. Challis substr. CH1] Length = 639 Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust. Identities = 268/642 (41%), Positives = 385/642 (59%), Gaps = 33/642 (5%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYD+IVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DA Sbjct: 8 SYDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M + D + IQ ++LN KGPAVR R QAD+E+Y M++ + +QENL + Q Sbjct: 68 LGGEMAKNIDKSYIQMKMLNTGKGPAVRALRAQADKEVYSKEMRKTVENQENLTLRQ--- 124 Query: 125 AGFNTEKNIISSIVMQDNSMIRCST----------VVLTTGTFLRGVIHIGKLKIPAGRM 174 +I+ I+++D +I T V++TTGT LRG I IG LK +G Sbjct: 125 -------TMINEILVEDGKVIGVKTATHQEYAAKAVIVTTGTALRGEIIIGDLKYSSGPN 177 Query: 175 GDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DK 232 + L ++ F+ GR KTGTP R+ +I +D TE Q DE+ FS+ + + Sbjct: 178 HSLAAIPLADNLRDLGFEIGRFKTGTPPRVKASSINYDVTEIQPGDEKANHFSYTSRDED 237 Query: 233 ITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQ 292 Q+ C +T TN E+H II N+ + ++SG +K GPRYCPSIEDKIVRF ++ HQ Sbjct: 238 YVKDQVPCWLTYTNAESHEIIQNNLHRAPMFSGIVKGVGPRYCPSIEDKIVRFADKERHQ 297 Query: 293 IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF 352 +FLEPEG +T+ VY G+ST+LPE++Q + +I GLE ++R GYAIEYD I P +L Sbjct: 298 LFLEPEGRDTEEVYVQGLSTSLPEDVQKDLVHSIKGLENAEMMRTGYAIEYDMIMPHQLR 357 Query: 353 PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMI 412 TLETKKISGLF AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMI Sbjct: 358 ATLETKKISGLFTAGQTNGTSGYEEAAGQGIIAGINAALKIQGRPELILKRSDGYIGVMI 417 Query: 413 DDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYN 472 DDL +KG +EPYR+ TSRAEYR+ LR DNAD RLT +G ++G + + R RF +++ Sbjct: 418 DDLVTKGTVEPYRLLTSRAEYRLILRHDNADMRLTEMGREIGLVDDERWARFEIKKNQFD 477 Query: 473 FLRSLLKSLVL---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKF 528 L+S+ L N + FK TA EF+ P+ S Q++ I P A + Sbjct: 478 NEMKRLESIKLKPVKETNAKVEELGFKPLTDAVTAKEFMRRPEVSYQDVVQFIGPAAEEL 537 Query: 529 SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 +IE ++ E Y Y + + + +++K E++ IP + D+ + +++ E ++K + Sbjct: 538 DEKIIELIETEIKYEGYISKALDQVEKMKRMEEKRIPANIDWDDIDSIATEARQKFKKIN 597 Query: 589 PFNLLQASKIEGMTPAALNLLLIY-------IKKNTVKLNEI 623 P + QAS+I G+ PA +++L++Y I KN K N + Sbjct: 598 PETIGQASRISGVNPADISILMVYLEGKARSISKNKEKQNHV 639 >gi|332364139|gb|EGJ41916.1| glucose inhibited division protein A [Streptococcus sanguinis SK49] Length = 659 Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust. Identities = 264/626 (42%), Positives = 382/626 (61%), Gaps = 26/626 (4%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYD+IVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DA Sbjct: 32 SYDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDA 91 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M + D + IQ ++LN KGPAVR R QAD+E+Y M++ + +QENL + Q Sbjct: 92 LGGEMAKNIDKSYIQMKMLNTGKGPAVRALRAQADKEVYSKEMRKTVENQENLTLRQ--- 148 Query: 125 AGFNTEKNIISSIVMQDNSMIRCST----------VVLTTGTFLRGVIHIGKLKIPAGRM 174 +I+ I+++D +I T V++TTGT LRG I IG LK +G Sbjct: 149 -------TMINEILVEDGKVIGVKTATQQEYAAKAVIVTTGTALRGEIIIGDLKYSSGPN 201 Query: 175 GDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DK 232 + L ++ F+ GR KTGTP R+ +I +D TE Q DE+ FS+ + + Sbjct: 202 HSLAAIPLADNLRDLGFEIGRFKTGTPPRVKASSINYDVTEIQPGDEKANHFSYTSRDED 261 Query: 233 ITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQ 292 Q+ C +T TN E+H II N+ + ++SG +K GPRYCPSIEDKIVRF ++ HQ Sbjct: 262 YVKDQVPCWLTYTNAESHEIIQNNLHRAPMFSGIVKGVGPRYCPSIEDKIVRFADKERHQ 321 Query: 293 IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF 352 +FLEPEG +T+ VY G+ST+LPE++Q + +I GLE ++R GYAIEYD I P +L Sbjct: 322 LFLEPEGRDTEEVYVQGLSTSLPEDVQKDLVHSIKGLENAEMMRTGYAIEYDMIMPHQLR 381 Query: 353 PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMI 412 TLETKKISGLF AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMI Sbjct: 382 ATLETKKISGLFTAGQTNGTSGYEEAAGQGIIAGINAALKIQGKPELILKRSDGYIGVMI 441 Query: 413 DDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYN 472 DDL +KG +EPYR+ TSRAEYR+ LR DNAD RLT IG ++G + + R RF +++ Sbjct: 442 DDLVTKGTVEPYRLLTSRAEYRLILRHDNADMRLTEIGREIGLVDDERWARFEIKKNQFD 501 Query: 473 FLRSLLKSLVL---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKF 528 L+S+ L N ++ FK TA EF+ P+ S Q++ I P A + Sbjct: 502 NEMKRLESIKLKPVKETNAKVEALGFKPLTDAVTAKEFMRRPEVSYQDVVQFIGPAAEEL 561 Query: 529 SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 +IE ++ E Y Y + + + +++K E++ IP + D+ + +++ E ++K + Sbjct: 562 DEKIIELIETEIKYEGYISKALDQVEKMKRMEEKRIPANIDWDDIDSIATEARQKFKKIN 621 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIK 614 P + QAS+I G+ PA +++L++Y++ Sbjct: 622 PETIGQASRISGVNPADISILMVYLE 647 >gi|206901392|ref|YP_002250834.1| glucose-inhibited division protein A [Dictyoglomus thermophilum H-6-12] gi|206740495|gb|ACI19553.1| glucose-inhibited division protein A [Dictyoglomus thermophilum H-6-12] Length = 619 Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust. Identities = 270/615 (43%), Positives = 374/615 (60%), Gaps = 9/615 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAGCEAA AA+LG LIT T+G + CNPA+GG GKGHL+ EIDAL Sbjct: 4 YDVIVVGGGHAGCEAAYAAARLGVKVLLITMNYDTVGWLPCNPAMGGPGKGHLIMEIDAL 63 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GL GR+ + + IQ ++LN KGPAVR R Q D+ +Y M+ + S +NL+V QGEV Sbjct: 64 GGLTGRITNRSMIQVKMLNTSKGPAVRALRAQVDKWVYPAKMREFLESIKNLEVYQGEVV 123 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + +++ VV+T GTF+ GVIHI PAGRM + PS L ++ Sbjct: 124 DLIVENDEVKGVILSTKKEFYAERVVITPGTFMNGVIHISTWSKPAGRMNEFPSVGLSDA 183 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + + GR TGT R+D +TI + KT Q DE L FSF + Q+ +TRT Sbjct: 184 LRRLGLEVGRFNTGTTPRVDKRTIDFSKTVIQPGDEELHSFSFWEEPEPRDQVPSYLTRT 243 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 +T I++ NI +A G + GPRYCPSIE+K V F HQ+FLEPEG N+ + Sbjct: 244 TQKTKEIVLANIHLTASRIGGMVKKGPRYCPSIEEKYVWFPHHETHQVFLEPEGRNSVEI 303 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y GI T+LPE+IQ Q +R+IPGLE+V +IRPGYAI YD + P +L TLETKKI GL+L Sbjct: 304 YVQGIYTSLPEDIQIQILRSIPGLEEVELIRPGYAIAYDIVYPHQLKLTLETKKIKGLYL 363 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAAAQGL+AG N+A + + R + YIGV+IDDL +KGV EPYR Sbjct: 364 AGQINGTTGYEEAAAQGLIAGANAALSLLGKEPLIIRRDEGYIGVLIDDLVTKGVDEPYR 423 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 + TSRAEYRI LR DNAD RLTP KLG I E K F + +++ + + L+ L + Sbjct: 424 ILTSRAEYRILLRSDNADQRLTPKAYKLGLISEDMWKMFQEKMEKIKYEKRRLEKLSVQP 483 Query: 486 KNLSSTSISFKQDGKTRTA--YEFLSYPDFSIQNLFSICPDA---RKFSSLVIERLQIES 540 +N++ + + T+ + + P+ + ++L + +K+ +V + + Sbjct: 484 ENINYILLDKGTNPITQPVPLIQIIKRPEITYEDLEKVGLSGDLPKKWREIV----ETDI 539 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y +++ + KE + E IP+D +Y +P LS E +EKL ++P QA +I G Sbjct: 540 KYEGYIKKELDKVKEFQEYENLQIPEDINYGEIPHLSREGREKLEKIRPSTFGQAMRISG 599 Query: 601 MTPAALNLLLIYIKK 615 + L +LL Y+++ Sbjct: 600 VNAGDLTILLYYLRE 614 >gi|324989554|gb|EGC21500.1| glucose inhibited division protein A [Streptococcus sanguinis SK353] Length = 659 Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust. Identities = 264/626 (42%), Positives = 381/626 (60%), Gaps = 26/626 (4%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYD+IVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DA Sbjct: 32 SYDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDA 91 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M + D + IQ ++LN KGPAVR R QAD+ELY M++ + +QENL + Q Sbjct: 92 LGGEMAKNIDKSYIQMKMLNTGKGPAVRALRAQADKELYSKEMRKTVENQENLTLRQ--- 148 Query: 125 AGFNTEKNIISSIVMQDNSMIRCST----------VVLTTGTFLRGVIHIGKLKIPAGRM 174 +I+ I+++D +I T V++TTGT LRG I IG LK +G Sbjct: 149 -------TMINEILVEDGKVIGVKTATQQEYAAKAVIVTTGTALRGEIIIGDLKYSSGPN 201 Query: 175 GDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DK 232 + L ++ F+ GR KTGTP R+ +I +D TE Q DE+ FS+ + + Sbjct: 202 HSLAAIPLADNLRDLGFEIGRFKTGTPPRVKASSINYDVTEIQPGDEKANHFSYTSRDED 261 Query: 233 ITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQ 292 Q+ C +T TN E+H II N+ + ++SG +K GPRYCPSIEDKIVRF ++ HQ Sbjct: 262 YVKDQVPCWLTYTNAESHEIIQNNLHRAPMFSGIVKGVGPRYCPSIEDKIVRFADKERHQ 321 Query: 293 IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF 352 +FLEPEG +T+ VY G+ST+LPE++Q + +I GLE ++R GYAIEYD I P +L Sbjct: 322 LFLEPEGRDTEEVYVQGLSTSLPEDVQKDLVHSIKGLENAEMMRTGYAIEYDMIMPHQLR 381 Query: 353 PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMI 412 TLETKKISGLF AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMI Sbjct: 382 ATLETKKISGLFTAGQTNGTSGYEEAAGQGIIAGINAALKIQGKPELILKRSDGYIGVMI 441 Query: 413 DDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYN 472 DDL +KG +EPYR+ TSRAEYR+ LR DNAD RLT G ++G + + R RF +++ Sbjct: 442 DDLVTKGTVEPYRLLTSRAEYRLILRHDNADMRLTETGREIGLVDDERWARFEIKKNQFD 501 Query: 473 FLRSLLKSLVL---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKF 528 L+S+ L N ++ FK TA EF+ P+ S Q++ I P A + Sbjct: 502 NEMKRLESIKLKPVKETNAKVEALGFKPLTDAVTAKEFMRRPEVSYQDVVQFIGPAAEEL 561 Query: 529 SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 +IE ++ E Y Y + + + +++K E++ IP + D+ + +++ E ++K + Sbjct: 562 DEKIIELIETEIKYEGYISKALDQVEKMKRMEEKRIPANIDWDDIDSIATEARQKFKKIN 621 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIK 614 P + QAS+I G+ PA +++L++Y++ Sbjct: 622 PETIGQASRISGVNPADISILMVYLE 647 >gi|118359868|ref|XP_001013172.1| glucose-inhibited division protein A containing protein [Tetrahymena thermophila] gi|89294939|gb|EAR92927.1| glucose-inhibited division protein A containing protein [Tetrahymena thermophila SB210] Length = 671 Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust. Identities = 283/641 (44%), Positives = 403/641 (62%), Gaps = 39/641 (6%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 N YDV+VIGGGHAGCEAA AA+ GA T L+T K T+G MSCNP++GG+GKG+L+REI Sbjct: 31 NNKYDVVVIGGGHAGCEAAYAAARTGAKTLLLTQKKQTVGEMSCNPSMGGIGKGNLIREI 90 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ-ENLDVIQ 121 DAL GLMGR+AD +GIQ++VLN KG AV+GPR Q DR+ Y+ MQ + +Q NLDV + Sbjct: 91 DALGGLMGRMADLSGIQYKVLNSSKGAAVQGPRAQIDRDSYKKNMQNFLFNQVPNLDVAE 150 Query: 122 GEVAGF--NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGR-MGDS- 177 + + + I + Q+N I +VV+TTGTFLR HIG + PAGR + DS Sbjct: 151 ASAEDLLLDEKTHSIKGVKTQNNENIYSKSVVITTGTFLRAYCHIGHKRYPAGRHIRDSD 210 Query: 178 ----PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI 233 PS L + ++ F R TGTPAR+D +I ++ E Q +DE + PFSF+ + Sbjct: 211 QVEPPSIGLAKTLERYQFHIARYTTGTPARIDRNSINFEGLETQESDEIITPFSFVHEFY 270 Query: 234 T-----NRQIECGITRTNLETHRIIMENIKHSAIYS-GDIKSYGPRYCPSIEDKIVRFGE 287 + N ++C IT+TN +TH II N + ++ D K GPRYCP+IE K++RF + Sbjct: 271 SPFIPPNPLVKCYITQTNSKTHDIINSNRQFLPKFTFNDGKGLGPRYCPAIEKKVIRFPD 330 Query: 288 RNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN 347 + HQ++LEPEG N +++YPNG++TA PEEIQ +R+I GLE + RPGYA+EYD++N Sbjct: 331 KKYHQVWLEPEGYNNNIIYPNGLNTAFPEEIQLDLLRSIKGLENCVMTRPGYAVEYDFVN 390 Query: 348 PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSY 407 P+EL +LET+KI GL+LAGQINGTTGYEEAA+QG++AGIN+ ++ + + R++++ Sbjct: 391 PQELKKSLETRKIKGLYLAGQINGTTGYEEAASQGIIAGINAGQECQGKEPLILDRSEAF 450 Query: 408 IGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF-AK 466 IGV+IDDL S G+ EPYRMFTSR+E+R+SLR +NAD RLTP G+KLG I + +++ F K Sbjct: 451 IGVLIDDLISLGISEPYRMFTSRSEFRLSLRAENADFRLTPYGIKLGIINKEQEEVFRQK 510 Query: 467 YIQEYNFLRSLLKSLVLTSKNLSSTSISFK-QDGKTRTAYEFLSYPDFSI-------QNL 518 Y + + +L+ + + S++ I+ Q ++A + + D +I NL Sbjct: 511 YHMKVKGMHNLM-NFKMLSRDWQKKGINIDPQQPGYKSAADIIEKYDKNIDEISSAFNNL 569 Query: 519 FSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSN 578 F I P +K L+ E Y Y +Q KEI +K L D L ++ + Sbjct: 570 FEIEPQIKK-------HLETECKYRTYLDKQ---TKEILNLQKNLNSIDISEIDLESIKH 619 Query: 579 -ELKEKLSIL---KPFNLLQASKIEGMTPAALNLLLIYIKK 615 KE++ +L KP + AS+I G+ P L +L KK Sbjct: 620 TATKEEIELLSNHKPRTIYAASRIPGIRPTTLVQMLYLAKK 660 >gi|317500878|ref|ZP_07959090.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lachnospiraceae bacterium 8_1_57FAA] gi|316897758|gb|EFV19817.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lachnospiraceae bacterium 8_1_57FAA] Length = 636 Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust. Identities = 266/622 (42%), Positives = 382/622 (61%), Gaps = 17/622 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+ V+G GHAGCEAA A+LG T + T +I M CNP IGG KGHLV+EIDAL Sbjct: 15 YDIAVVGAGHAGCEAALACARLGFKTVMFTVSVDSIALMPCNPNIGGSSKGHLVKEIDAL 74 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV- 124 G MG+V D IQ ++LN KGPAV R QAD+ Y M+R + Q+NLD+ Q EV Sbjct: 75 GGEMGKVIDKTFIQSKMLNQSKGPAVHSLRAQADKSDYSKEMRRVLEEQDNLDIRQMEVT 134 Query: 125 ---AGFNTEKNI--ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 A E I I + ++ C V+L TGT+L+ G++ G G + Sbjct: 135 DIIADDPNESGIRKIKGVQTYSGAIYPCKAVILCTGTYLKARCIYGEISTQTGPNGLQSA 194 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KITNRQ 237 N L +S R KTGTPAR+D +I + K E+Q DER++PFSF TD + Q Sbjct: 195 NYLTDSLKSLGIKMYRFKTGTPARIDKNSIDFTKMEEQKGDERVVPFSFTTDPEDVQIDQ 254 Query: 238 IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 + C +T TN TH II EN+ S ++SG I+ GPRYCPSIEDK+V+F ++N HQ+F+EP Sbjct: 255 VSCWLTYTNETTHEIIRENLDRSPLFSGAIEGTGPRYCPSIEDKVVKFPDKNRHQVFIEP 314 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EG++T+ +Y G+S++LPE++Q+ R++PGLE I+R YAIEYD I+ ++L TLE Sbjct: 315 EGIHTNEMYVGGMSSSLPEDVQYAMYRSVPGLEHAKIVRNAYAIEYDCIDARQLKSTLEF 374 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 K I GLF GQ NG++GYEEAAAQG+VAGIN+ARK + I R+ YIGV+IDDL + Sbjct: 375 KNIEGLFSGGQFNGSSGYEEAAAQGIVAGINAARKLQGKEGIVIDRSQGYIGVLIDDLVT 434 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL 477 K EPYRM TSRAEYR+ LR DNAD RLT +G ++G I E +R+ K +++ + Sbjct: 435 KESREPYRMMTSRAEYRLLLRQDNADQRLTKLGYEIGLISE---ERYEKLLEKERLIEEE 491 Query: 478 LKSL----VLTSKNLSSTSISFKQDGKTR--TAYEFLSYPDFSIQNLFSICPDARKFSSL 531 + + + TS+ + + +++ T T E + P+ S + L I + + Sbjct: 492 IHRVERVNIGTSEEVQNLLKTYESTPLTSGTTLAELIRRPELSYEKLAPIDKNRKNLPED 551 Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 V +++ I Y Y RQM + ++ K E + IP+D +Y + +L E K+KL+ ++P + Sbjct: 552 VAQQVDINIKYDGYIKRQMRQVEQFKKLENKKIPEDINYDEIKSLRIEAKQKLNQIRPAS 611 Query: 592 LLQASKIEGMTPAALNLLLIYI 613 + QAS+I G++PA +++LL+Y+ Sbjct: 612 IGQASRISGVSPADVSVLLVYL 633 >gi|21911374|ref|NP_665642.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pyogenes MGAS315] gi|28896746|ref|NP_803096.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pyogenes SSI-1] gi|25090459|sp|Q8K5H7|MNMG_STRP3 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|21905590|gb|AAM80445.1| putative glucose inhibited division protein [Streptococcus pyogenes MGAS315] gi|28812000|dbj|BAC64929.1| putative glucose inhibited division protein [Streptococcus pyogenes SSI-1] Length = 632 Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust. Identities = 272/619 (43%), Positives = 377/619 (60%), Gaps = 8/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAG EA+ +++G T L T + M CNP+IGG KG +VREIDA Sbjct: 8 SYDVIVIGAGHAGVEASLATSRMGCKTLLATINLDMLAFMPCNPSIGGSAKGIVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ ++LN KGPAVR R QAD+ LY M+ + Q NL + Q + Sbjct: 68 LGGEMGKNIDKTYIQMKMLNTGKGPAVRALRAQADKSLYAREMKHTVEKQANLTLRQTMI 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ VV+TTGT LRG I +G+LK +G S +L + Sbjct: 128 DDILVEDGRVVGVLTATGQKFAAKAVVVTTGTALRGEIILGELKYSSGPNNSLASVTLAD 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--NRQIECGI 242 + K + GR KTGTP R+ +I +D+TE Q D++ FSFM+ QI C + Sbjct: 188 NLKKLGLEIGRFKTGTPPRVKASSINYDQTEIQPGDDKPNHFSFMSKDADYLKDQIPCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +H II +N+ + ++SG +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG +T Sbjct: 248 TYTNQTSHDIINQNLYRAPMFSGIVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRDT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q I +I GLEK ++R GYAIEYD + P +L TLETK ISG Sbjct: 308 EEVYVQGLSTSLPEDVQKDLIHSIKGLEKAEMMRTGYAIEYDIVLPHQLRATLETKLISG 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQ NGT+GYEEAA QGL+AGIN+A K + R+D+YIGVMIDDL +KG LE Sbjct: 368 LFTAGQTNGTSGYEEAAGQGLIAGINAALKVQGKSELILKRSDAYIGVMIDDLVTKGTLE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFA-KYIQEYNFLRSL--LK 479 PYR+ TSRAEYR+ LR DNAD RLT IG +G + + R K F K Q N L+ L +K Sbjct: 428 PYRLLTSRAEYRLILRHDNADMRLTEIGRDIGLVDDERWKAFEIKKNQFDNELKRLNSIK 487 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYP--DFSIQNLFSICPDARKFSSLVIERLQ 537 + + N + FK TA EF+ P D++I F + P A + +IE L+ Sbjct: 488 LKPVKATNDRVQELGFKPLTDAMTAKEFMRRPEIDYAIAVSF-VGPAAEDLDAKIIELLE 546 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 E Y Y + + + ++K E++ IP + D+ ++ +++ E ++K + P + QAS+ Sbjct: 547 TEIKYEGYIRKALDQVAKMKRMEEKRIPANIDWDAIDSIATEARQKFKKINPETIGQASR 606 Query: 598 IEGMTPAALNLLLIYIKKN 616 I G+ PA +++L+IY++ N Sbjct: 607 ISGVNPADISILMIYLEGN 625 >gi|242059989|ref|XP_002459140.1| hypothetical protein SORBIDRAFT_03g046560 [Sorghum bicolor] gi|241931115|gb|EES04260.1| hypothetical protein SORBIDRAFT_03g046560 [Sorghum bicolor] Length = 713 Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust. Identities = 272/622 (43%), Positives = 379/622 (60%), Gaps = 18/622 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAGCEAA +A+LGA T L+T I CNPA+GG K LV E+DAL Sbjct: 66 YDVIVVGGGHAGCEAALASARLGARTLLLTLNIDRIAWQPCNPAVGGPAKSQLVHEVDAL 125 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENL---DVIQG 122 G +G++ D +Q RVLN KGPAVR R Q D+ Y + M+ + S ENL + + Sbjct: 126 GGEIGKITDRCYLQKRVLNSSKGPAVRALRAQTDKREYAIEMKNVVESTENLFIREAMAT 185 Query: 123 EVA-GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 EV G N + + D +VVLTTGTF+ G I +G+ +PAGR G+S S+ Sbjct: 186 EVLIGKNDSVEGVRTFFGMD---FYAPSVVLTTGTFMSGKIWVGRTSMPAGRAGESASHG 242 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIEC 240 L + F+T RLKTGTP R+D +T+ + E Q DE + FSF + + Q+ C Sbjct: 243 LTENLQLLGFETDRLKTGTPPRIDRRTVDFSGLEPQHGDEEVGWFSFDPEFHVEREQMCC 302 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +TRT ETH+I+++N++ + Y G +++ GPRYCP+IEDK VRF ++ HQIFLEPEG Sbjct: 303 YLTRTTKETHQIVIDNLEETPTYGGWVEAKGPRYCPAIEDKTVRFKDKESHQIFLEPEGR 362 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 N +Y G ST LPE +Q +RTIPGLE ++RP YA+EYDY+ + +L TKK Sbjct: 363 NVPELYLQGFSTGLPERLQLSLVRTIPGLENCLMLRPAYAVEYDYLPAYQCSRSLMTKKF 422 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF +GQINGTTGYEEAAAQG+V+GIN+AR S+ I R SYIG +IDDL +K + Sbjct: 423 EGLFFSGQINGTTGYEEAAAQGIVSGINAARHSDGKSLIILERESSYIGTLIDDLVTKDL 482 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR----QKRFAKYIQEYNFLRS 476 EPYRM TSR+E+R+ LR DNAD+RLTP+G ++G I +RR Q + A+ QE + Sbjct: 483 REPYRMLTSRSEHRLLLRADNADSRLTPLGREIGLIDDRRWELYQSKQARIKQE----KE 538 Query: 477 LLKSLVLTSKNLSS--TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIE 534 LKS + ++ T++S + T L P + L S + E Sbjct: 539 RLKSTKVPGGEFAAEVTAVSNQPVKDLSTLEAILKKPHVQYKLLDKHGCGNENLSRIEKE 598 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 ++I+ Y + RQ + +I +E R +P+D DY S+ LS E +EKLS ++P + Q Sbjct: 599 CVEIDIKYEGFIARQQSQLHQIVNQEHRKLPEDLDYHSMTNLSLEAREKLSKVRPQTIGQ 658 Query: 595 ASKIEGMTPAALNLLLIYIKKN 616 AS+I G++PA + +LLI+++ N Sbjct: 659 ASRIGGVSPADMTVLLIWMESN 680 >gi|294792404|ref|ZP_06757551.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Veillonella sp. 6_1_27] gi|294456303|gb|EFG24666.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Veillonella sp. 6_1_27] Length = 623 Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust. Identities = 265/620 (42%), Positives = 385/620 (62%), Gaps = 16/620 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIGGGHAGCEAA A++G T + T I M CNPA+GG GK HLV E+DA Sbjct: 6 NYDVIVIGGGHAGCEAALATARMGHRTLMATISLDNIALMPCNPAVGGPGKSHLVYEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG ADA IQ R+LN+ KGPAV R Q+D+ Y+ M++ + + +NL+V Q V Sbjct: 66 LGGQMGINADATAIQMRMLNMGKGPAVHSLRCQSDKIKYQHLMKQTLENTDNLNVKQIMV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ IV + V+L TGT+L+G I IG + G G + Sbjct: 126 TELKVEDGKVTGIVTELGEFYGAKAVILCTGTYLKGKILIGDIDYVGGPNGQRVAEHFSQ 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S + + R KTGTPAR+D +T+ + Q D FSFM + I + C +T Sbjct: 186 SLLDNGVELMRFKTGTPARVDKRTLNLENMVVQEGDAHHHAFSFMDEWINRNEDVCWLTY 245 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN ETH II NI + +YSG I+ GPRYCPSIEDK+VRF ++ HQ+F+EPEG T+ Sbjct: 246 TNKETHEIIHSNIHRAPMYSGKIEGVGPRYCPSIEDKVVRFADKERHQLFVEPEGTGTNE 305 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+ST+LP ++Q+ F+RTIPGLE V I+RP YAIEYD +NP +L P L+ K I GL+ Sbjct: 306 MYVQGMSTSLPMDVQYAFLRTIPGLENVEIMRPAYAIEYDCLNPTQLTPALQVKNIEGLY 365 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ NGT+GYEEAAAQGL+AGIN+A + +R+++YIGV+IDDL +KG EPY Sbjct: 366 SAGQANGTSGYEEAAAQGLMAGINAALWLEGKEPFILARSEAYIGVLIDDLVTKGTNEPY 425 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSR+EYR+ LR DNAD RLT G ++G + + R+AK+ + + + L T Sbjct: 426 RMMTSRSEYRLLLRQDNADMRLTEKGREIGLV---KDDRWAKFTAKKAAIEEAMDMLRNT 482 Query: 485 SKNLSSTSISFKQDGKT---RT---AYEFLSYPDFSIQNLFSICPDA---RKFSSLVIER 535 N S + + + T RT AY+ + + S ++I DA ++++S V E Sbjct: 483 PVNPSKETQALLESLGTAPIRTGIHAYDLVKRNELS----YTIVADAFGLKRYTSDVEEA 538 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 + I +Y Y +QM + +++ E++++PK++DY+ + +S E ++KL+ ++P ++ QA Sbjct: 539 VDISITYEGYIKKQMEQVDKVRKLEEKILPKEWDYTQIKGISLEAQQKLNKIRPHSIGQA 598 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G++PA +++LLI +++ Sbjct: 599 SRISGVSPADVSVLLIQLEQ 618 >gi|302393073|ref|YP_003828893.1| glucose inhibited division protein A [Acetohalobium arabaticum DSM 5501] gi|302205150|gb|ADL13828.1| glucose inhibited division protein A [Acetohalobium arabaticum DSM 5501] Length = 631 Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust. Identities = 267/622 (42%), Positives = 385/622 (61%), Gaps = 15/622 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YD+IV+G GHAGCEAA AA+L T ++T + M CNPA+GG K +VREID Sbjct: 2 KNYDIIVVGTGHAGCEAALAAARLDCKTLVLTVDLDNVALMPCNPAVGGPAKSQMVREID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G + + D + IQ R LN KGPAV+ R Q D++ Y L M++ + ++NL++ QG Sbjct: 62 ALGGEIAKNLDRSFIQLRRLNTGKGPAVQALRAQVDKKDYSLNMKQVLEEEDNLELRQGI 121 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + + + ++ V+LTTGTFL+G I IG +G P+N+L Sbjct: 122 VTELLIENDKVEGVKLKTGIEFYSQKVILTTGTFLKGSIIIGDYSFNSGPHNQFPANALS 181 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSF--MTDKITNRQIECG 241 N+ + F+ R KTGTP R+D +T+ + K E+Q + + FSF + QI C Sbjct: 182 NNLEELGFEIRRFKTGTPPRIDKRTVDFSKLEEQPGIDEDVSFSFADIASAEQKDQISCW 241 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN ETH++I ENI S +Y G I+ GPRYCPSIEDK+++F ++ HQ+FLEPEG Sbjct: 242 LTETNQETHQLIRENIDRSPLYGGVIEGQGPRYCPSIEDKVMQFPDKKSHQLFLEPEGEY 301 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 +Y G ST+LPE++Q + + T+PG E+ I+RPGYAIEYD INP +L PTLETK I+ Sbjct: 302 IYEMYLAGFSTSLPEDVQIEMLHTLPGFEEAEIMRPGYAIEYDCINPLQLKPTLETKLIT 361 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GL+ AGQINGT+GYEEAA QGL+AGIN+ ++ + + R+++YIGV+IDDL ++G Sbjct: 362 GLYTAGQINGTSGYEEAAGQGLMAGINAVQRLKGEEPVILLRSEAYIGVLIDDLVTQGTQ 421 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRM TSRAEYR+ LR DNAD RLTP+G +LG I E R + F + + LK + Sbjct: 422 EPYRMLTSRAEYRLLLRHDNADLRLTPLGYELGLISEDRYRDFIDKKEAIEAEKKRLKEV 481 Query: 482 VL--------TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVI 533 L T K L ST I+ T L P+ ++L ++ D + SS V Sbjct: 482 KLHPDDDVQATLKELGSTGIN-----NVDTLARLLRRPELDYESLAALDSDRPELSSEVK 536 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E ++I+ Y Y RQ+ + + + + + IP+D DYS + LS+E EKL ++P ++ Sbjct: 537 EEVEIQLKYEGYINRQLKQVENQQELDGQKIPQDIDYSEISGLSDESLEKLDKIRPMSVG 596 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QA++I G+ PA ++LL +Y++K Sbjct: 597 QAARISGVKPADISLLTVYLEK 618 >gi|327467650|gb|EGF13147.1| glucose inhibited division protein A [Streptococcus sanguinis SK330] Length = 635 Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust. Identities = 263/626 (42%), Positives = 382/626 (61%), Gaps = 26/626 (4%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYD+IVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DA Sbjct: 8 SYDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M + D + IQ ++LN KGPAVR R QAD+E+Y M++ + +QENL + Q Sbjct: 68 LGGEMAKNIDKSYIQMKMLNTGKGPAVRALRAQADKEVYSKEMRKTVENQENLTLRQ--- 124 Query: 125 AGFNTEKNIISSIVMQDNSMIRCST----------VVLTTGTFLRGVIHIGKLKIPAGRM 174 +I+ I+++D +I T V++TTGT LRG I IG LK +G Sbjct: 125 -------TMINEILVEDGKVIGVKTATHQEYAAKAVIVTTGTALRGEIIIGDLKYSSGPN 177 Query: 175 GDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DK 232 + L ++ F+ GR KTGTP R+ +I +D TE Q DE+ FS+ + + Sbjct: 178 HSLAAIPLADNLRDLGFEIGRFKTGTPPRVKASSINYDVTEIQPGDEKANHFSYTSRDED 237 Query: 233 ITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQ 292 Q+ C +T TN E+H II N+ + ++SG +K GPRYCPSIEDKIVRF ++ HQ Sbjct: 238 YVKDQVPCWLTYTNAESHEIIQNNLHRAPMFSGIVKGVGPRYCPSIEDKIVRFADKERHQ 297 Query: 293 IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF 352 +FLEPEG +T+ VY G+ST+LPE++Q + +I GLE ++R GYAIEYD I P +L Sbjct: 298 LFLEPEGRDTEEVYVQGLSTSLPEDVQKDLVHSIKGLENAEMMRTGYAIEYDMIMPHQLR 357 Query: 353 PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMI 412 TLETKKISGLF AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMI Sbjct: 358 ATLETKKISGLFTAGQTNGTSGYEEAAGQGIIAGINAALKIQGKPELILKRSDGYIGVMI 417 Query: 413 DDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYN 472 DDL +KG +EPYR+ TSRAEYR+ LR DNAD RLT +G ++G + + R RF +++ Sbjct: 418 DDLVTKGTVEPYRLLTSRAEYRLILRHDNADMRLTEMGREIGLVDDERWARFEIKKNQFD 477 Query: 473 FLRSLLKSLVL---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKF 528 L+S+ L N ++ FK TA EF+ P+ S Q++ I P A + Sbjct: 478 NEMKRLESIKLKPVKETNAKVEALGFKPLTDAVTAKEFMRRPEVSYQDVVQFIGPAAEEL 537 Query: 529 SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 +IE ++ E Y Y + + + +++K E++ IP + D+ + +++ E ++K + Sbjct: 538 DEKIIELIETEIKYEGYISKALDQVEKMKRMEEKRIPANIDWDDIDSIATEARQKFKKIN 597 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIK 614 P + QAS+I G+ PA +++L++Y++ Sbjct: 598 PETIGQASRISGVNPADISILMVYLE 623 >gi|171686660|ref|XP_001908271.1| hypothetical protein [Podospora anserina S mat+] gi|170943291|emb|CAP68944.1| unnamed protein product [Podospora anserina S mat+] Length = 691 Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust. Identities = 282/645 (43%), Positives = 396/645 (61%), Gaps = 39/645 (6%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EA+A AA+ GA TAL+T +G SCNP+ GG+GKG ++REIDAL Sbjct: 2 FDVIVVGGGHAGAEASAAAARAGARTALVTPSLENLGVCSCNPSFGGIGKGTILREIDAL 61 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV- 124 DGL GR+ D AG+QFRVLN +KGPAV GPR Q DR LY+ M+ E+ + ++L+V+ G+V Sbjct: 62 DGLAGRIIDKAGLQFRVLNRRKGPAVWGPRAQIDRALYKKHMKEELTNYKDLEVVTGKVE 121 Query: 125 ------AGFNTE------KNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAG 172 AG E ++ I+ + ++ ++ +VV+TTGTFL G IHIG P+G Sbjct: 122 DIIVSDAGLTEEERAEGARSKITGVRLESGEVLPARSVVITTGTFLGGEIHIGLEAYPSG 181 Query: 173 RMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK 232 RMG+ + L S + F GRLKTGTP RL +I WD E+Q D+ +PFS++ DK Sbjct: 182 RMGEEATFGLSKSLREAGFKLGRLKTGTPPRLAKGSINWDILEEQLGDDPPMPFSYLNDK 241 Query: 233 IT--NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNG 290 + Q++C T TN TH I+ N+ + +K GPRYCPS+E KI+RFG ++ Sbjct: 242 VDVDGHQLKCHATYTNHSTHDIVRANLDRTIHIRETVK--GPRYCPSLESKIIRFGHKDS 299 Query: 291 HQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKE 350 H ++LEPEG + +V+YPNG+S +P + Q +RTI GLE V +++PGY +EYDY++P+ Sbjct: 300 HIVWLEPEGFDNEVIYPNGLSMTIPADAQEALLRTIRGLENVTMLQPGYGVEYDYVDPRS 359 Query: 351 LFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGV 410 L TLETK ISGLFLAGQINGTTGYEEAA QG++AGIN+ R + L + SR D+YIG+ Sbjct: 360 LKRTLETKHISGLFLAGQINGTTGYEEAAGQGVIAGINAGRTALNLPSVSLSRFDAYIGI 419 Query: 411 MIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQE 470 MIDDL +KGV EPYRMFTSR+E+R+ R DNAD RLTP+G G I R + + + Sbjct: 420 MIDDLVTKGVSEPYRMFTSRSEFRLRTRSDNADVRLTPLGHSWGVISPSRWESYLETSSS 479 Query: 471 YNFLRSLLKSLVLTSKNLSST-----------SISFKQDGKTRTAYEFLSYPDFSIQN-- 517 L SLL+S +L S ++T + R YE + + S + Sbjct: 480 STALYSLLESTILPSPQWTTTHPLPQTNSDINGVKVSGIQMLRKIYEHATTTNLSSSSSP 539 Query: 518 ---------LFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDF 568 L P +F ER+ IE+ Y + Q+ EA +E L+P D Sbjct: 540 PPLSSSVSALEPTLPAVGEFPPKTQERVAIEAVYEPFVKFQLAEAARAVRDEHLLLPTDL 599 Query: 569 DYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYI 613 DY+++ LS + KL+ +P ++ QA ++EG+TP + +LL ++ Sbjct: 600 DYTTVTGLSIAEQTKLNETRPESIGQARRVEGVTPNGVVMLLRHV 644 >gi|218247682|ref|YP_002373053.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cyanothece sp. PCC 8801] gi|257060981|ref|YP_003138869.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cyanothece sp. PCC 8802] gi|218168160|gb|ACK66897.1| glucose inhibited division protein A [Cyanothece sp. PCC 8801] gi|256591147|gb|ACV02034.1| glucose inhibited division protein A [Cyanothece sp. PCC 8802] Length = 631 Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust. Identities = 267/615 (43%), Positives = 369/615 (60%), Gaps = 5/615 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVIV+G GHAGCEAA +A+LG T ++T I CNPA+GG K L E+DA Sbjct: 8 QFDVIVVGAGHAGCEAALASARLGCRTLMLTLNLDKIAWQPCNPAVGGPAKSQLTHEVDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G +G++AD +Q RVLN +GPAV R Q D+ Y M+ + +Q+NL + + Sbjct: 68 LGGEIGKMADRTYLQKRVLNASRGPAVWALRAQTDKREYAAIMKEIVENQDNLSIREAMA 127 Query: 125 AGFNTEKNI-ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 KN + + + V+LTTGTFL G I IG + AGR G+ S L Sbjct: 128 TDLILGKNEEVIGVQTYFGTCFGAKAVILTTGTFLGGRIWIGNKSMEAGRAGEFASVGLS 187 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGI 242 + + F+ GRLKTGTPAR+D +++ + E Q D+ + FSF D R Q+ C I Sbjct: 188 ETLNRLGFEVGRLKTGTPARVDKRSVDYSNLETQPPDDEIRWFSFDPDAWIEREQMNCYI 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 TRT +TH++I +N+ S IY G I S GPRYCPSIEDKIVRF +++ HQIF+EPEG Sbjct: 248 TRTTSQTHQLIKDNLHLSPIYGGFIDSKGPRYCPSIEDKIVRFADKDSHQIFIEPEGREI 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +Y G ST LPE IQ +RT+PGLE ++RP YA+EYDY+ + +PTL TKKI G Sbjct: 308 PELYIQGFSTGLPENIQLAMLRTLPGLENCVMLRPAYAVEYDYLPATQCYPTLMTKKIEG 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQG+VAGIN+ R K + I F+R +SY+G +IDDL +K + E Sbjct: 368 LFCAGQINGTTGYEEAAAQGIVAGINAVRFVKKQEMIIFAREESYLGTLIDDLCTKDLRE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRM TSR+EYR+ LR DNAD RLTP+G ++G I +RR + F + L Sbjct: 428 PYRMLTSRSEYRLILRSDNADQRLTPLGREIGLIDDRRWQLFQDKQANIIAEKERLHETR 487 Query: 483 LTSKNLSSTSISFKQDGKTR---TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + K+ + +I + K + T + L P F +L + +S+ E +I+ Sbjct: 488 IKEKDEVAITIVNDTNQKIKGSITLADLLRRPQFHYIDLERYGLGNAQLNSVEKEGAEID 547 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y+ Y RQ + +I + R +P+D +Y + LS E +EKL+ +KP L QAS+I Sbjct: 548 IKYSGYLKRQQNQIDQISRQSNRQLPEDLNYMKIETLSMEAREKLNKIKPLTLGQASRIG 607 Query: 600 GMTPAALNLLLIYIK 614 G+ PA +N LL+Y++ Sbjct: 608 GVNPADINALLVYLE 622 >gi|41058568|gb|AAR99267.1| glucose-inhibited division protein A [Candidatus Blochmannia vicinus] Length = 593 Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust. Identities = 280/592 (47%), Positives = 375/592 (63%), Gaps = 25/592 (4%) Query: 40 TIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQAD 99 T+G MSCNPAIGG+GKGHLV+EID++ G M D AGIQFR+LN KG AVRG R QAD Sbjct: 2 TLGQMSCNPAIGGIGKGHLVKEIDSMGGAMACAIDNAGIQFRILNRSKGAAVRGTRAQAD 61 Query: 100 RELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSM-IRCSTVVLTTGTFL 158 + LYR ++ + QE+L +IQ V KN I + + M I ++VVLTTGTFL Sbjct: 62 KILYRQIIRNTLEYQESLLIIQASVEDLIINKNKIVGVFIPKIGMKISATSVVLTTGTFL 121 Query: 159 RGVIHIGKLKIPAGRMGDSPSNSLFNSFMK-FDFDTGRLKTGTPARLDGKTIIWDKTEKQ 217 G IHIG GR GD S+S+ + +K F GRLKTGT R+ K I +D E Q Sbjct: 122 NGKIHIGMNNFRGGRAGDVESSSVLSKRLKEFSLRVGRLKTGTSPRVHSKGINFDALEAQ 181 Query: 218 FADERLIPFSFM-TDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCP 276 ++D + FSF+ ++K +Q+ C IT TN +TH II N+ S I++G I+ PRYCP Sbjct: 182 YSDSPVPIFSFIGSEKQHPKQVPCYITYTNDKTHEIIRSNLNQSPIHAGLIEGISPRYCP 241 Query: 277 SIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIR 336 SIEDKI RF +RN HQIFLEPEGL T +Y NGIST+LP +Q Q I++I GLE +IIR Sbjct: 242 SIEDKITRFSDRNAHQIFLEPEGLTTPEIYLNGISTSLPFYVQIQMIKSIQGLENAHIIR 301 Query: 337 PGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKL 396 PGYAIEYD+ +P++L TLE+K ISGLF +GQINGTTGYEEAAAQGL+AGIN+AR S Sbjct: 302 PGYAIEYDFFDPRDLKLTLESKFISGLFFSGQINGTTGYEEAAAQGLLAGINAARFSQNK 361 Query: 397 DCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCI 456 + R +Y+GV++DDL + G EPYRMFTSRAEYR+SLR DNAD RLT I +LG + Sbjct: 362 EGWYPRRDQAYLGVLVDDLCTYGTKEPYRMFTSRAEYRLSLREDNADLRLTAIARQLGLV 421 Query: 457 GERRQKRFAKYIQEYNFLRSLLKSLVLTS--------KNLSSTSISFKQDGKTRTAYEFL 508 E R K F + R L+++ + N T ++++ +G+ E L Sbjct: 422 DELRWKNFCLKKESIEKERQRLRNVYIFPYSTDAKQLNNFLKTPLTYEVNGE-----ELL 476 Query: 509 SYPDFSIQNLFSICPDARKFSSL-----VIERLQIESSYAAYTGRQMIEAKEIKFEEKRL 563 P+ + L + R FSS V E+++I+ Y Y Q E + E L Sbjct: 477 RRPEVNYVTLSKL----RVFSSFVSDRQVFEQIEIQIKYEGYIRHQQKEIERRICNEHIL 532 Query: 564 IPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 +P D D++ + LS E+ +KL+ KP+++ QAS+I G+TPAA++ LL+++KK Sbjct: 533 LPTDIDFNVVSGLSKEVIDKLNDYKPYSVGQASRISGVTPAAISNLLVWLKK 584 >gi|325689330|gb|EGD31336.1| glucose inhibited division protein A [Streptococcus sanguinis SK115] Length = 659 Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust. Identities = 263/626 (42%), Positives = 381/626 (60%), Gaps = 26/626 (4%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYD+IVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DA Sbjct: 32 SYDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDA 91 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M + D + IQ ++LN KGPAVR R QAD+E+Y M++ + +QENL + Q Sbjct: 92 LGGEMAKNIDKSYIQMKMLNTGKGPAVRALRAQADKEVYSKEMRKTVENQENLTLRQ--- 148 Query: 125 AGFNTEKNIISSIVMQDNSMIRCST----------VVLTTGTFLRGVIHIGKLKIPAGRM 174 +I+ I+++D +I T V++TTGT LRG I IG LK +G Sbjct: 149 -------TMINEILVEDGKVIGVKTATHQEYAAKAVIVTTGTALRGEIIIGDLKYSSGPN 201 Query: 175 GDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DK 232 + L ++ F+ GR KTGTP R+ +I +D TE Q DE+ FS+ + + Sbjct: 202 HSLAAIPLADNLRDLGFEIGRFKTGTPPRVKASSINYDVTEIQPGDEKANHFSYTSRDED 261 Query: 233 ITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQ 292 Q+ C +T TN E+H II N+ + ++SG +K GPRYCPSIEDKIVRF ++ HQ Sbjct: 262 YVKDQVPCWLTYTNAESHEIIQNNLHRAPMFSGIVKGVGPRYCPSIEDKIVRFADKERHQ 321 Query: 293 IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF 352 +FLEPEG +T+ VY G+ST+LPE++Q + +I GLE ++R GYAIEYD I P +L Sbjct: 322 LFLEPEGRDTEEVYVQGLSTSLPEDVQKDLVHSIKGLENAEMMRTGYAIEYDMIMPHQLR 381 Query: 353 PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMI 412 TLETKKISGLF AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMI Sbjct: 382 ATLETKKISGLFTAGQTNGTSGYEEAAGQGIIAGINAALKIQGKPELILKRSDGYIGVMI 441 Query: 413 DDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYN 472 DDL +KG +EPYR+ TSRAEYR+ LR DNAD RLT +G ++G + + R RF +++ Sbjct: 442 DDLVTKGTVEPYRLLTSRAEYRLILRHDNADMRLTEMGREIGLVDDERWARFEIKKNQFD 501 Query: 473 FLRSLLKSLVL---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKF 528 L+S+ L N + FK TA EF+ P+ S Q++ I P A + Sbjct: 502 NEMKRLESIKLKPVKETNAKVEELGFKSLTDAVTAKEFMRRPEVSYQDVVQFIGPAAEEL 561 Query: 529 SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 +IE ++ E Y Y + + + +++K E++ IP + D+ + +++ E ++K + Sbjct: 562 DEKIIELIETEIKYEGYISKALDQVEKMKRMEEKRIPANIDWDDIDSIATEARQKFKKIN 621 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIK 614 P + QAS+I G+ PA +++L++Y++ Sbjct: 622 PETIGQASRISGVNPADISILMVYLE 647 >gi|282897503|ref|ZP_06305504.1| Glucose-inhibited division protein A subfamily [Raphidiopsis brookii D9] gi|281197598|gb|EFA72493.1| Glucose-inhibited division protein A subfamily [Raphidiopsis brookii D9] Length = 642 Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust. Identities = 272/625 (43%), Positives = 370/625 (59%), Gaps = 25/625 (4%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAGCEAA A+LG T L+T I CNPA+GG K L E+DA Sbjct: 18 AYDVIVVGAGHAGCEAALAVARLGCPTLLLTLNLDKIAWQPCNPAVGGPAKSQLTHEVDA 77 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G +G++AD +Q RVLN +GPAV R Q D+ Y M+ + +QENL + +G V Sbjct: 78 LGGEIGKMADRTYLQKRVLNSSRGPAVWALRAQTDKREYAAVMKGIVENQENLTIREGMV 137 Query: 125 AGFNTEKNI-ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 KN I + C V+LTTGTFL G I +G + AGR G+ + L Sbjct: 138 TDLVLGKNDEIIGVETYFGVAFACKAVILTTGTFLGGRIWVGNKSMEAGRAGEFAAVGLT 197 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + + F+TGRLKTGTPAR+D +++ + K E Q DE + FSF + QI C + Sbjct: 198 ATLNRLGFETGRLKTGTPARVDKRSVDYSKMEIQPGDEEVRWFSFDPQVWLEKEQIPCYM 257 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 TRT ETHR+I EN+ S +Y G + + GPRYCPSIEDKIVRF ++ HQIF+EPEG + Sbjct: 258 TRTTPETHRLIQENLGLSPVYGGWVDAKGPRYCPSIEDKIVRFADKESHQIFIEPEGRDI 317 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +Y G ST LPE +Q +R++PGLEK ++RP YA+EYDY+ + +P+L TKKI G Sbjct: 318 PELYIQGFSTGLPETLQILMLRSLPGLEKCVMLRPAYAVEYDYLPATQCYPSLMTKKIQG 377 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGLVAGIN+ + + + F R SYIG +IDDL +K + E Sbjct: 378 LFCAGQINGTTGYEEAAAQGLVAGINAVQFVQGREMVIFPREQSYIGTLIDDLCTKDLRE 437 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRM TSR+EYR+ LR DNAD R+TP+G +G I +RR F + QE+ ++ Sbjct: 438 PYRMLTSRSEYRLLLRSDNADQRMTPLGRAIGLIDDRRWNLFTRK-QEH---------II 487 Query: 483 LTSKNLSSTSISFKQD-GKTRTAY------------EFLSYPDFSIQNLFSICPDARKFS 529 + L ST I +D G+ T + + L P+ +L Sbjct: 488 GEKERLHSTRIKEHEDIGRLITQHTQQVIKGSITLVDLLRRPEIHYLDLERYGLGNPHLH 547 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 + E +I+ Y+ Y RQ + +I + R +P + DY S+ LS E +EKL+ +KP Sbjct: 548 AAEKEGAEIDIKYSGYLARQQNQIDQIARQANRHLPPNLDYDSITTLSKEAREKLTTVKP 607 Query: 590 FNLLQASKIEGMTPAALNLLLIYIK 614 + QAS+I G+ PA +N LLIY++ Sbjct: 608 LTIGQASRIGGVNPADINALLIYLE 632 >gi|290581400|ref|YP_003485792.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus mutans NN2025] gi|254998299|dbj|BAH88900.1| glucose inhibited division protein homolog [Streptococcus mutans NN2025] Length = 631 Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust. Identities = 270/619 (43%), Positives = 380/619 (61%), Gaps = 12/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIG GHAG EA+ +++G T L T + M CNP+IGG KG +VREIDA Sbjct: 8 NYDVIVIGAGHAGVEASLATSRMGCKTLLATINLEMLAFMPCNPSIGGSAKGIVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D + IQ R+LN KGPAVR R QAD+ LY M+ + QENL + Q + Sbjct: 68 LGGEMGKNIDKSYIQMRMLNTGKGPAVRALRAQADKALYARNMKHTVEQQENLTLRQSMI 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + N V++TTGT LRG I +G+LK +G S +L + Sbjct: 128 DEILVEDGKVIGVRTATNQKYSAQAVIVTTGTALRGEIILGELKYSSGPNNSLASITLAD 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGI 242 + + GR KTGTP R+ +I +D+TE Q D++ FSFM+ + QI C + Sbjct: 188 NLRDLGLEIGRFKTGTPPRVKANSIHYDETEIQPGDKKPNHFSFMSKDEDYLKDQIPCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +H II +N+ + ++SG +K GPRYCPSIEDKIVRF +++ HQ+FLEPEG T Sbjct: 248 TYTNQSSHDIINKNLYRAPMFSGIVKGVGPRYCPSIEDKIVRFADKDRHQLFLEPEGRET 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q + +I GLE ++R GYAIEYD + P +L TLETKKISG Sbjct: 308 EEVYIQGLSTSLPEDVQKDVVHSIKGLENAEMMRTGYAIEYDIVLPHQLRATLETKKISG 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQ NGT+GYEEAA QG+VAGIN+A K + R+D+YIGVMIDDL +KG LE Sbjct: 368 LFTAGQTNGTSGYEEAAGQGIVAGINAALKIQGKPELILKRSDAYIGVMIDDLVTKGTLE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFA----KYIQEYNFLRSL- 477 PYR+ TSRAEYR+ LR DNAD RLT IG ++G + E R RF ++ E L S+ Sbjct: 428 PYRLLTSRAEYRLILRHDNADLRLTEIGHQVGLVNEERYMRFQIRKNQFDNELTRLSSIK 487 Query: 478 LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPD--FSIQNLFSICPDARKFSSLVIER 535 LK + +K + + FK TA EF+ P+ ++I F + P A VIE Sbjct: 488 LKPVAEINKRIE--ELGFKPLTDALTAKEFMRRPEINYAIATSF-VGPAAESLDEKVIEL 544 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 L+ E Y Y + + + ++K E++ IPK+ D+ ++ +++ E ++K + P + QA Sbjct: 545 LETEIKYEGYINKALDQVAKMKRMEEKRIPKNIDWDAIDSIATEARQKFKKINPETIGQA 604 Query: 596 SKIEGMTPAALNLLLIYIK 614 S+I G+ PA +++L++Y++ Sbjct: 605 SRISGVNPADISILMVYLE 623 >gi|296875548|ref|ZP_06899620.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus parasanguinis ATCC 15912] gi|296433472|gb|EFH19247.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus parasanguinis ATCC 15912] Length = 636 Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust. Identities = 261/615 (42%), Positives = 377/615 (61%), Gaps = 6/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DAL Sbjct: 9 YDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + D IQ ++LN KGPAVR R QAD+ELY M++ + +Q+NL + Q + Sbjct: 69 GGEMAKNIDKTYIQMKMLNTGKGPAVRALRAQADKELYSKEMRKTVENQDNLTLRQTMID 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + V++TTGT LRG I IG LK +G S +L ++ Sbjct: 129 EILVENGKVVGVRTATHQEYGAKAVIVTTGTALRGEIIIGDLKYSSGPNHSLASINLADN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 + + GR KTGTP R+ +I +D+TE Q DE FS+ + + Q+ C +T Sbjct: 189 LKQLGLEIGRFKTGTPPRVKASSINYDETEIQPGDEAPNHFSYTSRDEDYVKDQVPCWLT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +H II N+ + +++G +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG NT+ Sbjct: 249 YTNGHSHEIIQNNLHRAPMFTGVVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRNTE 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE++Q + +I GLEK ++R GYAIEYD + P +L TLETKKISGL Sbjct: 309 EVYVQGLSTSLPEDVQRDLVHSIKGLEKAEMMRTGYAIEYDMVLPHQLRATLETKKISGL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMIDDL +KG +EP Sbjct: 369 FTAGQTNGTSGYEEAAGQGIIAGINAALKIQGKPELILKRSDGYIGVMIDDLVTKGTIEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF-AKYIQEYNFLRSL--LKS 480 YR+ TSRAEYR+ LR DNAD RLT +G +G + + R +RF K Q N ++ L +K Sbjct: 429 YRLLTSRAEYRLILRHDNADMRLTEMGRAIGLVDDERWQRFETKKYQFENEMKRLDSIKL 488 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQIE 539 + N ++ FK TA EFL P+ S Q++ I P A + +IE ++ E Sbjct: 489 KPVKETNEKVATMGFKPLTDAVTAKEFLRRPEVSYQDVVEFIGPAAEELDDKIIELIETE 548 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + M + +++K E++ IP + D+ + +++ E ++K ++ P + QAS+I Sbjct: 549 IKYEGYISKAMDQVEKMKRMEEKRIPANIDWDDIDSIATEARQKFKLINPETIGQASRIS 608 Query: 600 GMTPAALNLLLIYIK 614 G+ PA +++L++Y++ Sbjct: 609 GVNPADISILMVYLE 623 >gi|158335338|ref|YP_001516510.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Acaryochloris marina MBIC11017] gi|189039326|sp|B0BZY6|MNMG_ACAM1 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|158305579|gb|ABW27196.1| glucose-inhibited dvision protein A [Acaryochloris marina MBIC11017] Length = 635 Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust. Identities = 263/624 (42%), Positives = 380/624 (60%), Gaps = 25/624 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIV+G GHAGCEAA +A++G ST L+T I CNPA+G K L E+DAL Sbjct: 13 FEVIVVGAGHAGCEAALASARMGCSTLLLTLNLDKIAWQPCNPAVGAPAKSQLTHEVDAL 72 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G +G++AD +Q R+LN +GPAV R Q D+ Y M+ + +Q NL V +G Sbjct: 73 GGEIGKMADRTYLQKRLLNHSRGPAVWALRAQTDKREYAAVMKTIVENQGNLTVREG--- 129 Query: 126 GFNTEKNIISSIVMQDNSMI-----------RCSTVVLTTGTFLRGVIHIGKLKIPAGRM 174 +++ +V+ DN + RC V+LTTGTFL G I +G +PAGR Sbjct: 130 -------MVTDLVLGDNDEVVGVQTYFGVAFRCQAVILTTGTFLGGRIWVGDKSMPAGRA 182 Query: 175 GDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSF-MTDKI 233 G+ + L + + F+TGRLKTGTPAR+D ++ + E Q D+++ FSF I Sbjct: 183 GEFAAEGLTETLNQLGFETGRLKTGTPARVDKRSADFSVMEPQPPDQQVRWFSFDPAVWI 242 Query: 234 TNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQI 293 Q+ C ITRT ETH++I +N+ S +Y G + + GPRYCPSIEDKIVRF ++ HQI Sbjct: 243 EREQMNCYITRTTPETHQLIQDNLHLSPVYGGWVDAKGPRYCPSIEDKIVRFADKASHQI 302 Query: 294 FLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFP 353 F+EPEG + +Y G ST LPE +Q + +R++PGLE ++RP YA+EYDY+ + +P Sbjct: 303 FIEPEGRDIPELYIQGFSTGLPEALQLRMLRSLPGLEHCAMLRPAYAVEYDYLPATQCYP 362 Query: 354 TLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMID 413 TL TK+I GLF AGQINGTTGYEEAAAQG+VAGIN+AR+ N+ + + F R +SYIG +ID Sbjct: 363 TLMTKRIEGLFCAGQINGTTGYEEAAAQGIVAGINAARRVNQQEMLIFPRAESYIGTLID 422 Query: 414 DLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNF 473 DL +K + EPYRM T R+EYR+ LR DNAD RLTP+G ++G I +RR F + Sbjct: 423 DLCTKDLREPYRMLTGRSEYRLLLRSDNADQRLTPLGREVGLIDDRRWHLFTRKQATITA 482 Query: 474 LRSLLKSLVLTSKNLSSTSISFKQDGKTR---TAYEFLSYPDFSIQNLFSICPDARKFSS 530 + L + L ++ ++ +I K + T + L P F +L Sbjct: 483 EKERLHATRLKERDPAAQAIVQTTGEKIKGSITLSDLLRRPKFHYCDLQQHGLGIETLER 542 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 E ++IE YA Y RQ + +++ +E+R +P++ DY+S+ LS E +EKL+ ++P Sbjct: 543 SERESVEIEIKYAGYIQRQQRQIEQVSRQEQRKLPENIDYASIETLSMEAREKLAKVRPL 602 Query: 591 NLLQASKIEGMTPAALNLLLIYIK 614 + QAS+I G+ P+ +N LL Y++ Sbjct: 603 TVGQASRIGGVNPSDINALLFYLE 626 >gi|327471583|gb|EGF17026.1| glucose inhibited division protein A [Streptococcus sanguinis SK408] Length = 659 Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust. Identities = 263/626 (42%), Positives = 382/626 (61%), Gaps = 26/626 (4%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYD+IVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DA Sbjct: 32 SYDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDA 91 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M + D + IQ ++LN KGPAVR R QAD+E+Y M++ + +QENL + Q Sbjct: 92 LGGEMAKNIDKSYIQMKMLNTGKGPAVRALRAQADKEVYSKEMRKTVENQENLTLRQ--- 148 Query: 125 AGFNTEKNIISSIVMQDNSMIRCST----------VVLTTGTFLRGVIHIGKLKIPAGRM 174 +I+ I+++D +I T V++TTGT LRG I IG LK +G Sbjct: 149 -------TMINEILVEDGKVIGVKTATHQEYAAKAVIVTTGTALRGEIIIGDLKYSSGPN 201 Query: 175 GDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DK 232 + L ++ F+ GR KTGTP R+ +I +D TE Q DE+ FS+ + + Sbjct: 202 HSLAAIPLADNLRDLGFEIGRFKTGTPPRVKASSINYDVTEIQPGDEKANHFSYTSRDED 261 Query: 233 ITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQ 292 Q+ C +T TN E+H II N+ + ++SG +K GPRYCPSIEDKIVRF ++ HQ Sbjct: 262 YVKDQVPCWLTYTNAESHEIIQNNLHRAPMFSGIVKGVGPRYCPSIEDKIVRFADKERHQ 321 Query: 293 IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF 352 +FLEPEG +T+ VY G+ST+LPE++Q + +I GLE ++R GYAIEYD I P +L Sbjct: 322 LFLEPEGRDTEEVYVQGLSTSLPEDVQKDLVHSIKGLENAEMMRTGYAIEYDMIMPHQLR 381 Query: 353 PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMI 412 TLETKKISGLF AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMI Sbjct: 382 ATLETKKISGLFTAGQTNGTSGYEEAAGQGIIAGINAALKIQGKPELILKRSDGYIGVMI 441 Query: 413 DDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYN 472 DDL +KG +EPYR+ TSRAEYR+ LR DNAD RLT +G ++G + + R RF +++ Sbjct: 442 DDLVTKGTVEPYRLLTSRAEYRLILRHDNADMRLTEMGREIGLVDDERWARFEIKKNQFD 501 Query: 473 FLRSLLKSLVL---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKF 528 L+S+ L N ++ FK TA EF+ P+ S Q++ I P A + Sbjct: 502 NEMKRLESIKLKPVKETNAKVEALGFKPLTDAVTAKEFMRRPEVSYQDVVQFIGPAAEEL 561 Query: 529 SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 +IE ++ E Y Y + + + +++K E++ IP + D+ + +++ E ++K + Sbjct: 562 DEKIIELIETEIKYEGYISKALDQVEKMKRMEEKRIPANIDWDDIDSIATEARQKFKKIN 621 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIK 614 P + QAS+I G+ PA +++L++Y++ Sbjct: 622 PETIGQASRISGVNPADISILMVYLE 647 >gi|319760151|ref|YP_004124089.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Candidatus Blochmannia vafer str. BVAF] gi|318038865|gb|ADV33415.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Candidatus Blochmannia vafer str. BVAF] Length = 636 Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust. Identities = 273/618 (44%), Positives = 386/618 (62%), Gaps = 21/618 (3%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+GGGHAG EAA A++L T LITH T+G MSCNP+IGG+GKGHLV+EIDA Sbjct: 6 NFDVIVVGGGHAGTEAALAASQLKCHTLLITHNIDTLGQMSCNPSIGGIGKGHLVKEIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 + G+M D +GIQFR+LN KG AV+ R QAD+ LY+ +++ + Q L ++Q V Sbjct: 66 MGGIMANAIDRSGIQFRILNSSKGAAVKSTRAQADKILYKQIIRQSLEDQSYLYILQASV 125 Query: 125 AGFNTEKNIISSIVMQDNSM-IRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 N + +++ + M I +V+LTTGTFL G I+IG GR GD S+SL Sbjct: 126 EDVIIRHNKVMGVIIPNIEMKIFARSVILTTGTFLNGKIYIGMNNFEGGRAGDLESSSLL 185 Query: 184 NS-FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQIECG 241 + + RLKTGT R+ K + ++ +Q +D + FSF+ + K +QI C Sbjct: 186 SRRLQELSLKVNRLKTGTSPRIYAKGVNFECMVEQHSDCPIPVFSFIGSSKQHPKQIPCY 245 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT TN +TH II N+ HS +Y+G I PRYCPSIEDK++RF +++ HQIFLEPEGL Sbjct: 246 ITHTNSKTHDIIRSNLHHSPVYAGLINGIPPRYCPSIEDKVIRFPDKDTHQIFLEPEGLT 305 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T +Y NG++T+LP +Q Q I++I GLE I+RPGYAIEYD+ NP +L TLE+K IS Sbjct: 306 TSEIYLNGVATSLPFNVQIQIIQSIKGLENARILRPGYAIEYDFFNPIDLKLTLESKFIS 365 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLFL+GQINGTTGYEEAAAQGL++GIN+AR + R SY+GV++DDL + G Sbjct: 366 GLFLSGQINGTTGYEEAAAQGLLSGINAARYAQNKTEWYPKRDQSYLGVLVDDLCTHGTT 425 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK-- 479 EPYRMFTSRAEYR+SLR DNAD RLT I +LG I + R + F +++ N R + Sbjct: 426 EPYRMFTSRAEYRLSLREDNADLRLTDIARQLGLITDNRWRIFC--VKQENIEREFQRFR 483 Query: 480 --------SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSS 530 + ++ ++ + K +G+ ++Y S + F + D + Sbjct: 484 NTYIFPNTTDIIKLNSILKVPLMNKVNGEDLLKRPEINYATLSQLSTFKPVISDNQ---- 539 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 V E+++I+ YA Y RQ E E L+P D +Y+++ LS E+ EKL+ +P+ Sbjct: 540 -VYEQIEIQIKYAGYLNRQKEEIDRNLRNEDTLLPFDINYNNIVGLSTEVVEKLNYCRPY 598 Query: 591 NLLQASKIEGMTPAALNL 608 ++ QAS+I G+TP A+++ Sbjct: 599 SVGQASRISGITPVAISI 616 >gi|225871460|ref|YP_002747407.1| glucose inhibited division protein A [Streptococcus equi subsp. equi 4047] gi|225700864|emb|CAW95609.1| glucose inhibited division protein A [Streptococcus equi subsp. equi 4047] Length = 632 Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust. Identities = 270/619 (43%), Positives = 376/619 (60%), Gaps = 8/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+G GHAG EA+ A+++G T L T + M CNP+IGG KG +VREIDA Sbjct: 8 SYDVIVVGAGHAGVEASLAASRMGCKTLLATINLDMLAFMPCNPSIGGSAKGIVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ ++LN KGPAVR R QAD+ LY M+ + QENL + Q + Sbjct: 68 LGGEMGKNIDKTYIQMKMLNTGKGPAVRALRAQADKSLYAREMKHTVEKQENLTLRQSMI 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ V++TTGT LRG I +G+LK +G S +L + Sbjct: 128 DDILVENGRVVGVLTATGQKYAAQAVIITTGTALRGEIILGELKYSSGPNNSLASVTLAD 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT---DKITNRQIECG 241 + K + GR KTGTP R+ +I ++ TE Q D FSFM+ D + N QI C Sbjct: 188 NLKKLGLEIGRFKTGTPPRVKASSIDYEVTEIQPGDVTPNHFSFMSKDKDYLAN-QIPCW 246 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN +H II +N+ + ++SG +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG + Sbjct: 247 LTYTNQISHDIITKNLYRAPMFSGVVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGFD 306 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ VY G+ST+LPE++Q + + +I GLE ++R GYAIEYD + P +L TLETK IS Sbjct: 307 TEEVYVQGLSTSLPEDVQKELVHSIKGLENAEMMRTGYAIEYDIVLPHQLRATLETKMIS 366 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQ NGT+GYEEAA QGLVAGIN+A K + R+D+YIGVMIDDL +KG L Sbjct: 367 GLFTAGQTNGTSGYEEAAGQGLVAGINAALKVQGKPELILKRSDAYIGVMIDDLVTKGTL 426 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFA-KYIQEYNFLRSL--L 478 EPYR+ TSRAEYR+ LR DNAD RLT IG ++G + + R F K Q N L+ L + Sbjct: 427 EPYRLLTSRAEYRLILRHDNADMRLTEIGRQIGLVDDERWSAFEIKKNQFDNELKRLDSI 486 Query: 479 KSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQ 537 K + N + FK TA EF+ P+ + S I P A + +IE L+ Sbjct: 487 KLKPIKETNARVQKLGFKSLTDAMTAKEFMRRPEVDYATVVSFIGPAAEGLDAKLIELLE 546 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 E Y Y + + + ++K E++ IPK D+ ++ +++ E ++K + P + QAS+ Sbjct: 547 TEIKYEGYIKKALDQVAKMKRMEEKRIPKTIDWDAIDSIATEARQKFKKINPETIGQASR 606 Query: 598 IEGMTPAALNLLLIYIKKN 616 I G+ PA +++L++Y++ N Sbjct: 607 ISGVNPADISILMVYLEGN 625 >gi|158285249|ref|XP_308209.4| AGAP007661-PA [Anopheles gambiae str. PEST] gi|157019900|gb|EAA04633.4| AGAP007661-PA [Anopheles gambiae str. PEST] Length = 666 Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust. Identities = 267/626 (42%), Positives = 408/626 (65%), Gaps = 17/626 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 S+DVIV+GGGHAG EA + AA++GA T L+T K STIG MSCNP+ GG+GKGHL+RE+DA Sbjct: 37 SFDVIVVGGGHAGTEACSAAARMGARTLLVTQKRSTIGEMSCNPSFGGIGKGHLIREVDA 96 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDG+ R D +G+Q++VLN +KGPAV GPR Q DR+LY+ +Q+ + + NL +++ V Sbjct: 97 LDGVCARCCDRSGVQYKVLNRRKGPAVWGPRAQIDRKLYKREVQQTLENTPNLTIVEASV 156 Query: 125 AGF----NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 ++E+ ++ + + D + ++V+TTGTFLRG I+IG PAGR+GD P+ Sbjct: 157 EDIVLSEDSEQPRLAGVKLADGRTMTADSLVITTGTFLRGQINIGLETRPAGRIGDEPAI 216 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI---TNRQ 237 L S + F GRLKTGTP R+ +I +++ + D+ +PFSF+ D++ ++Q Sbjct: 217 GLAKSIEELGFRLGRLKTGTPPRIHRDSIRFEQLARHPGDDPPVPFSFLNDRVWLEAHQQ 276 Query: 238 IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 ++C +T+T + + I++ N+ + + ++ GPRYCPSIE KI+RFG + HQI+LEP Sbjct: 277 LDCFLTQTTAQVNDIVLRNLHCNRHVTEELT--GPRYCPSIESKILRFGHKL-HQIWLEP 333 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EG +++++YPNG+S LP + Q Q +R + GLE+ ++RPGY +EYD+++P+EL PTLET Sbjct: 334 EGFDSELIYPNGLSCTLPADEQVQLVRCLEGLEQAEVVRPGYGVEYDFVDPRELLPTLET 393 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 K++ GLFLAGQINGTTGYEEAAAQGL+AG N+A + + SRT++Y+GV++DDLT+ Sbjct: 394 KRVRGLFLAGQINGTTGYEEAAAQGLLAGANAAASALARPPLTVSRTEAYLGVLVDDLTT 453 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL 477 G EPYRMFTSRAE+R+SLRPDNAD RLT G +G + R +R Q L Sbjct: 454 LGTNEPYRMFTSRAEFRLSLRPDNADLRLTEKGYAMGLVSRERFERTRSIRQRLANASEL 513 Query: 478 LKSLVLTSKNL-SSTSISFKQDGKTRTAYEFL--SYPDFSIQNLFSICPDARKF---SSL 531 L+ + S ++ + + ++A+E L S + + + + ++ P + Sbjct: 514 LRDVKRGSNQWRAAMQLPLAKASVYKSAFEMLAISNDEITTERVCAVEPTVLGWIRDDRE 573 Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDY-SSLPALSNELKEKLSILKPF 590 + +RL+IE+ Y+ Q E +E+ E IP DY S LS E +EKL ++P Sbjct: 574 LCQRLKIEALYSLSIEDQSREVEEVLRNESLRIPDAIDYLSKSLNLSFEEQEKLVKIQPQ 633 Query: 591 NLLQASKIEGMTPAALNLLLIYIKKN 616 + AS+I+G+TP+++ L+ ++K++ Sbjct: 634 TIAAASRIQGITPSSIVRLVKFVKQH 659 >gi|71904532|ref|YP_281335.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pyogenes MGAS6180] gi|123639044|sp|Q48QN0|MNMG_STRPM RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|71803627|gb|AAX72980.1| glucose inhibited division protein A [Streptococcus pyogenes MGAS6180] Length = 632 Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust. Identities = 270/618 (43%), Positives = 375/618 (60%), Gaps = 6/618 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAG EA+ +++G T L T + M CNP+IGG KG +VREIDA Sbjct: 8 SYDVIVIGAGHAGVEASLATSRMGCKTLLATINLDMLAFMPCNPSIGGSAKGIVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ ++LN KGPAVR R QAD+ LY M+ + Q NL + Q + Sbjct: 68 LGGEMGKNIDKTYIQMKMLNTGKGPAVRALRAQADKSLYAREMKHTVEKQANLTLRQTMI 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ VV+TTGT LRG I +G+LK +G S +L + Sbjct: 128 DDILVEDGRVVGVLTATGQKFAAKAVVVTTGTALRGEIILGELKYSSGPNNSLASVTLAD 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KITNRQIECGI 242 + K + GR KTGTP R+ +I +D+TE Q D++ FSFM+ + QI C + Sbjct: 188 NLKKLGLEIGRFKTGTPPRVKASSINYDQTEIQPGDDKPNHFSFMSKDAEYLKDQIPCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +H II +N+ + ++SG +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG +T Sbjct: 248 TYTNQTSHDIINQNLYRAPMFSGIVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRDT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q I +I GLEK ++R GYAIEYD + P +L TLETK ISG Sbjct: 308 EEVYVQGLSTSLPEDVQKDLIHSIKGLEKAEMMRTGYAIEYDIVLPHQLRATLETKLISG 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQ NGT+GYEEAA QGL+AGIN+A K + R+D+YIGVMIDDL +KG LE Sbjct: 368 LFTAGQTNGTSGYEEAAGQGLIAGINAALKVQGKPELILKRSDAYIGVMIDDLVTKGTLE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFA-KYIQEYNFLRSL--LK 479 PYR+ TSRAEYR+ LR DNAD RLT IG +G + + R K F K Q N L+ L +K Sbjct: 428 PYRLLTSRAEYRLILRHDNADMRLTEIGRDIGLVDDERWKAFEIKKNQFDNELKRLNSIK 487 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQI 538 + + N + FK TA EF+ P+ S + P A + +IE L+ Sbjct: 488 LKPVKATNDRVQELGFKPLTDAMTAKEFMRRPEIDYATAVSFVGPAAEDLDAKIIELLET 547 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E Y Y + + + ++K E++ IP + D+ ++ +++ E ++K + P + QAS+I Sbjct: 548 EIKYEGYIRKALDQVAKMKRMEEKRIPANIDWDAIDSIATEARQKFKKINPETIGQASRI 607 Query: 599 EGMTPAALNLLLIYIKKN 616 G+ PA +++L+IY++ N Sbjct: 608 SGVNPADISILMIYLEGN 625 >gi|124004897|ref|ZP_01689740.1| glucose-inhibited division protein A [Microscilla marina ATCC 23134] gi|123989575|gb|EAY29121.1| glucose-inhibited division protein A [Microscilla marina ATCC 23134] Length = 620 Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust. Identities = 273/628 (43%), Positives = 387/628 (61%), Gaps = 30/628 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAGCEAA+ AA LG+ LIT + I MSCNPA+GG+ KG +VREIDAL Sbjct: 5 YDVIVVGGGHAGCEAASAAANLGSKVLLITMDMNKIAQMSCNPAMGGVAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADR----ELYRLAMQREILSQENLDVIQ 121 G+ G V D IQFR+LN KG A+ PR Q+DR E +R+ +++ + N+D Q Sbjct: 65 GGMSGIVTDKTMIQFRMLNRSKGAAMWSPRCQSDRMRFAEEWRITLEQNL----NVDFWQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V G + N +S +V + ++V+LT+GTF+ G+IHIG+ + GR G+ S Sbjct: 121 DMVVGMVVKDNQVSGVVTSMGLEVLSNSVILTSGTFMNGLIHIGEKQFGGGRAGERASKG 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 + ++ F+ GR+KTGTP R+D ++I ++ E+Q D FS+ Q C Sbjct: 181 ITEQLVQLGFEAGRMKTGTPPRVDARSINYEVMEEQAGDVDPGKFSYTDTPKLKEQRSCH 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT TN + H I+ + S +++G IK GPRYCPSIEDKI RF ER HQIF+EPEG N Sbjct: 241 ITYTNKKVHAILEKGFDKSPMFAGRIKGIGPRYCPSIEDKINRFAERERHQIFVEPEGWN 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T VY NG ST+LPEE+Q++ + +I G E + RPGYAIEYDY P +L TLETK + Sbjct: 301 TVEVYVNGFSTSLPEEVQYEALHSIVGFENAKMFRPGYAIEYDYFPPTQLKMTLETKLVE 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 LF AGQINGTTGYEEAA QG++AGIN+ K + + SR+++YIGV+IDDL +KG Sbjct: 361 NLFFAGQINGTTGYEEAACQGMMAGINAHLKVKEENPFILSRSEAYIGVLIDDLINKGTD 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKR--------------FAKY 467 EPYRMFTSRAEYRI LR DNAD RLT KLG E+R +R AK Sbjct: 421 EPYRMFTSRAEYRILLRQDNADLRLTEKSYKLGLASEKRMQRVREKRGQIKQMSEELAKI 480 Query: 468 IQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARK 527 + N + + L++L S S I+ + + ++E L + S+ + + Sbjct: 481 KYKPNEINNHLETLGTASIKEKSALINLVK--RPEVSFEKLRSLEGSVAEFLN------Q 532 Query: 528 FSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSIL 587 F V+E+++I + YA+Y ++ A+++ E IP FDY +L A+S+E +EKL + Sbjct: 533 FDHEVVEQVEILTKYASYIDKEEKMAQKLYELEGFRIPVSFDYDNLKAISSEGREKLKTI 592 Query: 588 KPFNLLQASKIEGMTPAALNLLLIYIKK 615 +P + QAS+I G++P+ +++L++Y+ + Sbjct: 593 RPDTIGQASRISGVSPSDISILMVYLGR 620 >gi|25012136|ref|NP_736531.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus agalactiae NEM316] gi|77408891|ref|ZP_00785616.1| glucose inhibited division protein A [Streptococcus agalactiae COH1] gi|77413195|ref|ZP_00789393.1| glucose inhibited division protein A [Streptococcus agalactiae 515] gi|61224541|sp|P0A3F0|MNMG_STRA3 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|61224542|sp|P0A3F1|MNMG_STRA5 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|24413680|emb|CAD47760.1| Unknown [Streptococcus agalactiae NEM316] gi|77160735|gb|EAO71848.1| glucose inhibited division protein A [Streptococcus agalactiae 515] gi|77172482|gb|EAO75626.1| glucose inhibited division protein A [Streptococcus agalactiae COH1] Length = 633 Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust. Identities = 273/620 (44%), Positives = 381/620 (61%), Gaps = 14/620 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YD+IV+G GHAG EA+ A+++G T L T + M CNP+IGG KG +VREIDA Sbjct: 8 NYDIIVVGAGHAGVEASLAASRMGCKTLLATINLEMLAFMPCNPSIGGSAKGIVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ ++LN KGPAVR R QAD+ LY M++ + QENL + Q + Sbjct: 68 LGGEMGKNIDKTYIQMKMLNTGKGPAVRALRAQADKALYAQTMKQTVEKQENLTLRQAMI 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + N +VV+TTGT LRG I +G LK +G S +L + Sbjct: 128 DEILVEDGKVVGVRTATNQKFSAKSVVITTGTALRGEIILGDLKYSSGPNNSLASVTLAD 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT---DKITNRQIECG 241 + + GR KTGTP R+ +I ++KTE Q DE+ FSFM+ D IT+ Q+ C Sbjct: 188 NLRDLGLEIGRFKTGTPPRVKASSINYEKTEIQPGDEQPNHFSFMSRDEDYITD-QVPCW 246 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN +H II +N+ + ++SG +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG Sbjct: 247 LTYTNTLSHDIINQNLHRAPMFSGIVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRY 306 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ VY G+ST+LPE++Q +R+I GLE ++R GYAIEYD + P +L TLETK I+ Sbjct: 307 TEEVYVQGLSTSLPEDVQVDLLRSIKGLENAEMMRTGYAIEYDIVLPHQLRATLETKVIA 366 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQ NGT+GYEEAA QGLVAGIN+A K + R+D+YIGVMIDDL +KG L Sbjct: 367 GLFTAGQTNGTSGYEEAAGQGLVAGINAALKVQGKPELILKRSDAYIGVMIDDLVTKGTL 426 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR----QKRFAKYIQEYNFLRSL 477 EPYR+ TSRAEYR+ LR DNAD RLT IG ++G + E R +KR ++ E L S+ Sbjct: 427 EPYRLLTSRAEYRLILRHDNADMRLTEIGYEIGLVDEERYAIFKKRQMQFENELERLDSI 486 Query: 478 -LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPD--FSIQNLFSICPDARKFSSLVIE 534 LK + T+K + + FK TA EF+ P +++ F C D S VIE Sbjct: 487 KLKPVSETNKRIQ--ELGFKPLTDALTAKEFMRRPQITYAVATDFVGCAD-EPLDSKVIE 543 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 L+ E Y Y + + + ++K E++ IP D+ + +++ E ++K + P L Q Sbjct: 544 LLETEIKYEGYIKKALDQVAKMKRMEEKRIPPHIDWDDIDSIATEARQKFKKINPETLGQ 603 Query: 595 ASKIEGMTPAALNLLLIYIK 614 AS+I G+ PA +++L++Y++ Sbjct: 604 ASRISGVNPADISILMVYLE 623 >gi|295103709|emb|CBL01253.1| glucose-inhibited division protein A [Faecalibacterium prausnitzii SL3/3] Length = 624 Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust. Identities = 272/621 (43%), Positives = 374/621 (60%), Gaps = 10/621 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAG EAA AA LGA TA+ T IG+M CNP+IGG KG LVRE+DAL Sbjct: 7 YDVIVIGAGHAGIEAAHAAAVLGAKTAVFTMSLDAIGNMPCNPSIGGTAKGTLVREVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+MG ADA +Q R+LN KGPAV R Q DR Y M+ + L + Q EV Sbjct: 67 GGVMGLAADATYLQSRMLNKGKGPAVHALRVQTDRRRYNEYMKHALEQTPGLAIHQAEVV 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + +V Q + VVL TGT L G I +G +G G +N+L +S Sbjct: 127 ALEVENGHVKGVVTQLHGEYTAKCVVLATGTNLGGKIFVGDAWYASGPDGMHAANALTDS 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFAD--ERLIPFSFMTDKITNRQIECGIT 243 R KTGTPAR+ ++I + K E Q D L PFSF+TD + ++EC I Sbjct: 187 LKAAGLPLRRFKTGTPARVHRRSIDFSKLECQPGDPDSELQPFSFLTDAPMHNKVECWIA 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN ETH+II++NI+ S +Y G I+ GPRYCPSIEDK+VRF ++ H +F+EP G NT+ Sbjct: 247 YTNPETHKIILDNIQRSPLYGGMIEGVGPRYCPSIEDKVVRFSGKDRHPLFVEPCGENTE 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G S++LPE++Q+ F +I G E + I+RP YAIEYD ++P L TLE+K + GL Sbjct: 307 EMYLQGASSSLPEDVQNAFYHSIKGFEHLEIMRPAYAIEYDCVDPTSLEATLESKVVRGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQ NGT+GYEEAAAQGL+AG+N+AR + L+ + R SY+G ++DDL +KGV++P Sbjct: 367 YGAGQFNGTSGYEEAAAQGLLAGLNAARNALGLEQLVLPRHTSYLGTLVDDLVTKGVMDP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRM TSR+EYR++LR DNAD RLTPIG + G + + R+AKY L + + L Sbjct: 427 YRMMTSRSEYRLTLRQDNADQRLTPIGREYGLV---QDDRWAKYQHTQQILEAERRRLHE 483 Query: 484 TSKNLSSTSISFKQDG-----KTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 T + + + G + A E L P+ S + I + + ++ ERL+ Sbjct: 484 THLRTADLRAAMEAAGLAPAAEGGIAEELLRRPEISYPLVAGIIGWGEEITPMLAERLET 543 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E YA Y RQ +E+ EK LIP+DF+Y++L L+ E +EKL+ ++P NL QA +I Sbjct: 544 EIKYAGYIARQDRMIREVARHEKTLIPEDFEYAALTGLTLEAREKLARIRPRNLGQAGRI 603 Query: 599 EGMTPAALNLLLIYIKKNTVK 619 G++P+ + L I + K Sbjct: 604 PGVSPSDVAQLSIALAGKQQK 624 >gi|259048140|ref|ZP_05738541.1| glucose-inhibited division protein A [Granulicatella adiacens ATCC 49175] gi|259035201|gb|EEW36456.1| glucose-inhibited division protein A [Granulicatella adiacens ATCC 49175] Length = 641 Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust. Identities = 261/619 (42%), Positives = 373/619 (60%), Gaps = 5/619 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDV+V+G GHAG EAA +A++GA T L+T + M CNP++GG KG +VREIDA Sbjct: 18 NYDVVVVGAGHAGSEAALASARMGAKTLLLTMNLEMVAFMPCNPSVGGPAKGVVVREIDA 77 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ LY M++ I QENLD+ QG Sbjct: 78 LGGEMGRNIDKTYIQMRMLNTGKGPAVRALRAQADKHLYAQEMKKTIEKQENLDLRQGIA 137 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ ++ R VVLT GT RG I IG+LK +G PS L Sbjct: 138 EELIVEDGVCKGVITNTGAIYRSKAVVLTAGTSSRGQIIIGELKYSSGANNSQPSIKLSE 197 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR--QIECGI 242 + ++ F+ R KTGTP R+ G +I + KTE Q D+ FSF + R QI C + Sbjct: 198 NLLELGFELARFKTGTPPRIKGSSIDYSKTEIQPGDDTPNLFSFTSKDEDYRYDQIPCWL 257 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH I EN+ + +++G ++ G RYCPSIEDKIVRF ++ HQIFLEPEG NT Sbjct: 258 TYTNEQTHETIRENLHRAPMFTGIVEGVGARYCPSIEDKIVRFSDKPRHQIFLEPEGENT 317 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q + IR++ GLE ++R GYAIEYD + P +L T ETK + Sbjct: 318 EEVYIQGLSTSLPEDVQIKMIRSVEGLENAEMMRTGYAIEYDVVVPHQLKNTFETKLVQN 377 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQ+NGT+GYEEAA QGL AGIN+ RK + R+D+YIGV++DDL +KG E Sbjct: 378 LFTAGQMNGTSGYEEAAGQGLYAGINAVRKIRGEEPFILGRSDAYIGVLVDDLVTKGTTE 437 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYR+ TSRAEYR+ LR DNAD RLT G +LG I + R F + ++S+ Sbjct: 438 PYRLLTSRAEYRLLLRHDNADLRLTEKGRELGLIDDDRYAEFQAKQEAIEAEIKRMQSIR 497 Query: 483 LTSKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 L ++ K + + + L P+ S L +A + S V E+++I Sbjct: 498 LKPTTELQAFLAEKGSAELKDGILLSDLLKRPELSYDELVGFAGEAVEVSREVKEQVEIS 557 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + +++K E + IP + DY ++ L+ E +++L +++P + QAS+I Sbjct: 558 IKYEGYIAKAIEKVEKLKRMEAKRIPANIDYDAINGLATEARQRLKLIQPETIAQASRIS 617 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++L++YI++ + Sbjct: 618 GVNPADVSILMVYIEQGKI 636 >gi|114608197|ref|XP_527435.2| PREDICTED: protein MTO1 homolog, mitochondrial isoform 4 [Pan troglodytes] Length = 717 Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust. Identities = 283/655 (43%), Positives = 406/655 (61%), Gaps = 50/655 (7%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA+ G+ T L+TH+ TIG MSCNP+ GG+GKGHL+RE+DAL Sbjct: 37 FDVIVIGGGHAGTEAATAAARCGSRTLLLTHRVDTIGQMSCNPSFGGIGKGHLMREVDAL 96 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGL R+ D +G+ ++VLN +KGPAV G R Q DR+LY+ MQ+EIL+ L V +G V Sbjct: 97 DGLCSRICDQSGVHYKVLNRRKGPAVWGLRAQIDRKLYKQNMQKEILNTPLLTVQEGAVE 156 Query: 126 GF--------NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 +T K +S +V+ D S + +V+LTTGTFLRG+I IG PAGR+GD Sbjct: 157 DLILTEPEPEHTGKCRVSGVVLVDGSTVYAESVILTTGTFLRGMIVIGLETHPAGRLGDQ 216 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR- 236 PS L + K F GRLKTGTP + ++I ++ K D +PFSF + + + Sbjct: 217 PSIGLAQTLEKLGFVVGRLKTGTPPPIAKESINFNILNKHIPDNPSVPFSFTNETVWIKP 276 Query: 237 --QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 Q+ C +T TN I+++N+ ++ + GPRYCPSIE K++RF R HQ++ Sbjct: 277 EDQLPCYLTHTNPRVDEIVLKNLHLNSHVKETTR--GPRYCPSIESKVLRFPNRL-HQVW 333 Query: 295 LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRP----------------- 337 LEPEG+++D++YP G+S LP E+Q + I I GLEK +I+P Sbjct: 334 LEPEGMDSDLIYPQGLSMTLPAELQEKMITCIRGLEKAKVIQPDGVLLLLPRMECNGAIS 393 Query: 338 --------GYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINS 389 GY ++YDY++P+++ P+LET + LF AGQINGTTGYEEAAAQG++AGIN+ Sbjct: 394 AHHNLPLPGYGVQYDYLDPRQITPSLETHLVQRLFFAGQINGTTGYEEAAAQGVIAGINA 453 Query: 390 ARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPI 449 + + ++ SRT+ YIGV+IDDLT+ G EPYRMFTSR E+R+SLRPDNAD+RLT Sbjct: 454 SLRVSRKPPFVVSRTEGYIGVLIDDLTTLGTSEPYRMFTSRVEFRLSLRPDNADSRLTLR 513 Query: 450 GMK-LGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS----KNLSSTSISFKQDGKTRTA 504 G K GC+ ++R +R S+LKS+ S K + SIS + R A Sbjct: 514 GYKDAGCVSQQRYERACWMKSSLEEGISVLKSIEFLSSKWKKLIPEASISTSRSLPVR-A 572 Query: 505 YEFLSYPDFSIQNLFSICPDA-RKFSSL--VIERLQIESSYAAYTGRQMIEAKEIKFEEK 561 + L Y + + +L P+ +K++ + ERL+IE++Y + Q+ E K ++ +E Sbjct: 573 LDVLKYEEVDMDSLAKAVPEPLKKYTKCRELAERLKIEATYESVLFHQLQEIKGVQQDEA 632 Query: 562 RLIPKDFDYSSLP--ALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIK 614 +PKD DY ++ +LS+E++EKL +P + AS+I G+TPAA+ LL ++K Sbjct: 633 LQLPKDLDYLTIRDVSLSHEVREKLHFSRPQTIGAASRIPGVTPAAIINLLRFVK 687 >gi|332363580|gb|EGJ41361.1| glucose inhibited division protein A [Streptococcus sanguinis SK1059] Length = 659 Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust. Identities = 263/626 (42%), Positives = 381/626 (60%), Gaps = 26/626 (4%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYD+IVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DA Sbjct: 32 SYDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDA 91 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M + D + IQ ++LN KGPAVR R QAD+E+Y M++ + +QENL + Q Sbjct: 92 LGGEMAKNIDKSYIQMKMLNTGKGPAVRALRAQADKEVYSKEMRKTVENQENLTLRQ--- 148 Query: 125 AGFNTEKNIISSIVMQDNSMIRCST----------VVLTTGTFLRGVIHIGKLKIPAGRM 174 +I+ I+++D +I T V++TTGT LRG I IG LK +G Sbjct: 149 -------TMINEILVEDGKVIGVKTATQQEYAAKAVIVTTGTALRGEIIIGDLKYSSGPN 201 Query: 175 GDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DK 232 + L ++ F+ GR KTGTP R+ +I +D TE Q DE+ FS+ + + Sbjct: 202 HSLAAIPLADNLRDLGFEIGRFKTGTPPRVKASSINYDVTEIQPGDEKANHFSYTSRDED 261 Query: 233 ITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQ 292 Q+ C +T TN E+H II N+ + ++SG +K GPRYCPSIEDKIVRF ++ HQ Sbjct: 262 YVKDQVPCWLTYTNAESHEIIQNNLHRAPMFSGIVKGVGPRYCPSIEDKIVRFADKERHQ 321 Query: 293 IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF 352 +FLEPEG +T+ VY G+ST+LPE++Q + +I GLE ++R GYAIEYD I P +L Sbjct: 322 LFLEPEGRDTEEVYVQGLSTSLPEDVQKDLVHSIKGLENAEMMRTGYAIEYDMIMPHQLR 381 Query: 353 PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMI 412 TLETKKISGLF AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMI Sbjct: 382 ATLETKKISGLFTAGQTNGTSGYEEAAGQGIIAGINAALKIQGKPELILKRSDGYIGVMI 441 Query: 413 DDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYN 472 DDL +KG +EPYR+ TSRAEYR+ LR DNAD RLT +G ++G + + R RF +++ Sbjct: 442 DDLVTKGTVEPYRLLTSRAEYRLILRHDNADMRLTEMGREIGLVDDERWARFEIKKNQFD 501 Query: 473 FLRSLLKSLVL---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKF 528 L+S+ L N + FK TA EF+ P+ S Q++ I P A + Sbjct: 502 NEMKRLESIKLKPIKETNAKVEELGFKPLTDAVTAKEFMRRPEVSYQDVVQFIGPAAEEL 561 Query: 529 SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 +IE ++ E Y Y + + + +++K E++ IP + D+ + +++ E ++K + Sbjct: 562 DEKIIELIETEIKYEGYISKALDQVEKMKRMEEKRIPANIDWDDIDSIATEARQKFKKIN 621 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIK 614 P + QAS+I G+ PA +++L++Y++ Sbjct: 622 PETIGQASRISGVNPADISILMVYLE 647 >gi|94989479|ref|YP_597580.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pyogenes MGAS9429] gi|94993366|ref|YP_601465.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pyogenes MGAS2096] gi|139474608|ref|YP_001129324.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pyogenes str. Manfredo] gi|209560261|ref|YP_002286733.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pyogenes NZ131] gi|306826441|ref|ZP_07459753.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pyogenes ATCC 10782] gi|166200619|sp|Q1J990|MNMG_STRPB RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|166200620|sp|Q1JJD7|MNMG_STRPC RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|166200623|sp|A2RH03|MNMG_STRPG RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|94542987|gb|ABF33036.1| putative tRNA (5-carboxymethylaminomethyl-2-thiouridylate) synthase subunit [Streptococcus pyogenes MGAS9429] gi|94546874|gb|ABF36921.1| Putative tRNA (5-carboxymethylaminomethyl-2-thiouridylate) synthase subunit GidA [Streptococcus pyogenes MGAS2096] gi|134272855|emb|CAM31135.1| glucose inhibited division protein A [Streptococcus pyogenes str. Manfredo] gi|209541462|gb|ACI62038.1| Glucose inhibited division protein A [Streptococcus pyogenes NZ131] gi|304431371|gb|EFM34368.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pyogenes ATCC 10782] Length = 632 Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust. Identities = 270/618 (43%), Positives = 374/618 (60%), Gaps = 6/618 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAG EA+ +++G T L T + M CNP+IGG KG +VREIDA Sbjct: 8 SYDVIVIGAGHAGVEASLATSRMGCKTLLATINLDMLAFMPCNPSIGGSAKGIVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ ++LN KGPAVR R QAD+ LY M+ + Q NL + Q + Sbjct: 68 LGGEMGKNIDKTYIQMKMLNTGKGPAVRALRAQADKSLYAREMKHTVEKQANLTLRQTMI 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ VV+TTGT LRG I +G+LK +G S +L + Sbjct: 128 DDILVEDGRVVGVLTATGQKFAAKAVVVTTGTALRGEIILGELKYSSGPNNSLASVTLAD 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--NRQIECGI 242 + K + GR KTGTP R+ +I +D+TE Q D++ FSFM+ QI C + Sbjct: 188 NLKKLGLEIGRFKTGTPPRVKASSINYDQTEIQPGDDKPNHFSFMSKDADYLKDQIPCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +H II +N+ + ++SG +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG +T Sbjct: 248 TYTNQTSHDIINQNLYRAPMFSGIVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRDT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q I +I GLEK ++R GYAIEYD + P +L TLETK ISG Sbjct: 308 EEVYVQGLSTSLPEDVQKDLIHSIKGLEKAEMMRTGYAIEYDIVLPHQLRATLETKLISG 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQ NGT+GYEEAA QGL+AGIN+A K + R+D+YIGVMIDDL +KG LE Sbjct: 368 LFTAGQTNGTSGYEEAAGQGLIAGINAALKVQGKPELILKRSDAYIGVMIDDLVTKGTLE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFA-KYIQEYNFLRSL--LK 479 PYR+ TSRAEYR+ LR DNAD RLT IG +G + + R K F K Q N L+ L +K Sbjct: 428 PYRLLTSRAEYRLILRHDNADMRLTEIGRDIGLVDDERWKAFEIKKNQFDNELKRLNSIK 487 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQI 538 + + N + FK TA EF+ P+ S + P A + +IE L+ Sbjct: 488 LKPVKATNDRVQELGFKPLTDAMTAKEFMRRPEIDYATAVSFVGPAAEDLDAKIIELLET 547 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E Y Y + + + ++K E++ IP + D+ ++ +++ E ++K + P + QAS+I Sbjct: 548 EIKYEGYIRKALDQVAKMKRMEEKRIPANIDWDAIDSIATEARQKFKKINPETIGQASRI 607 Query: 599 EGMTPAALNLLLIYIKKN 616 G+ PA +++L+IY++ N Sbjct: 608 SGVNPADISILMIYLEGN 625 >gi|307636905|gb|ADN79355.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Helicobacter pylori 908] gi|325995494|gb|ADZ50899.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Helicobacter pylori 2018] gi|325997091|gb|ADZ49299.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Helicobacter pylori 2017] Length = 621 Score = 499 bits (1286), Expect = e-139, Method: Compositional matrix adjust. Identities = 282/630 (44%), Positives = 378/630 (60%), Gaps = 22/630 (3%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M+ S D++V+GGGHAG EA+ +AAK+GA LIT TIG SCNPAIGGLGKGHL + Sbjct: 1 MVKES-DILVVGGGHAGIEASLIAAKMGARVHLITMLIDTIGLASCNPAIGGLGKGHLTK 59 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+D L G MG + D +G+Q+RVLN KGPAVRG R Q D + YR+ + +L+ NL V Sbjct: 60 EVDVLGGAMGIITDHSGLQYRVLNASKGPAVRGTRAQIDMDTYRIFARNLVLNTPNLSVS 119 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q E + + + N+ R V++TTGTFL+GV+HIG+ + GR G++ SN Sbjct: 120 QEMTESLILENDEVVGVTTNINNTYRAKKVIITTGTFLKGVVHIGEHQNQNGRFGENASN 179 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 SL + + F RLKTGT R+ G +I ++ E+ F D FS+ T Q+ C Sbjct: 180 SLALNLRELGFKVERLKTGTCPRVAGNSIDFEGLEEHFGDANPPYFSYKTKDFNPTQLSC 239 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN TH+II +N + ++SG I+ GPRYCPSIEDKI RF E+ HQ+FLEP+ + Sbjct: 240 FITYTNPITHQIIRDNFHRAPLFSGQIEGIGPRYCPSIEDKINRFSEKERHQLFLEPQTI 299 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + Y NG+ST+LP ++Q + I +I GLE I R GYAIEYD+I P EL LETKKI Sbjct: 300 HKSEYYINGLSTSLPLDVQEKVIHSIKGLENALITRYGYAIEYDFIQPTELTHALETKKI 359 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GL+LAGQINGTTGYEEAAAQGL+AGIN+ R ++YIGV+IDDL +KG Sbjct: 360 KGLYLAGQINGTTGYEEAAAQGLMAGINAVLALKNQTPFILKRNEAYIGVLIDDLVTKGT 419 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGE---RRQKRFAKYIQEYNFLRSL 477 EPYRMFTSRAEYR+ LR DN RL +LG + + K+ + IQE N R Sbjct: 420 NEPYRMFTSRAEYRLLLREDNTLFRLGEHAYRLGLMEQDFYEELKKDQQAIQE-NLKR-- 476 Query: 478 LKSLVLTS--------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFS 529 LK VLT L I+ K DG + L+ F+ + + S + Sbjct: 477 LKECVLTPSKEVLKRLSELDENPINDKMDGVS-----LLARDSFNAEKMRSFFSFLAPLN 531 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 V+E+++IE Y Y +Q ++ K IPK F + +P LS E EKL +P Sbjct: 532 ERVLEQIKIECKYNIYIEKQHENIAKMDSMLKVSIPKHFVFKGIPGLSLEAVEKLEKFRP 591 Query: 590 FNLLQASKIEGMTPAALNLLLIYI--KKNT 617 +L +AS+I G+TPA L++L +YI +KN+ Sbjct: 592 KSLFEASEISGITPANLDVLHLYIHLRKNS 621 >gi|116071928|ref|ZP_01469196.1| glucose-inhibited division protein A [Synechococcus sp. BL107] gi|116065551|gb|EAU71309.1| glucose-inhibited division protein A [Synechococcus sp. BL107] Length = 641 Score = 499 bits (1286), Expect = e-139, Method: Compositional matrix adjust. Identities = 269/618 (43%), Positives = 375/618 (60%), Gaps = 8/618 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 S+DVIV+GGGHAGCEAA A+LG +TAL + I CNPA+GG K LV E+DA Sbjct: 10 SFDVIVVGGGHAGCEAAITTARLGLNTALFSLNLDRIAWQPCNPAVGGPAKSQLVHEVDA 69 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G++GR+ADA IQ R LN +GPAV R Q D+ LY M + + NL + + V Sbjct: 70 LGGVIGRLADATAIQKRTLNASRGPAVWALRAQTDKRLYSRQMLQLLQHTPNLALREAMV 129 Query: 125 AGFNTEKNI----ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 G I + S+ VVLT GTFL G I +G + AGR G+ + Sbjct: 130 TGLEVGGEGEEQRIQGVRTYFGSVYAAQAVVLTAGTFLGGRIWVGHQSMAAGRAGEQAAE 189 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSF-MTDKITNRQIE 239 L + T RLKTGTPAR+D ++I D+ E+Q +D FSF ++ Q+ Sbjct: 190 GLTETLQSLGLHTDRLKTGTPARVDRRSIALDQLEEQPSDAADRFFSFDPAAWVSGEQMS 249 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C ITRT ETH++I +N+ +AIY G I S GPRYCPSIEDKIVRF ++ HQIFLEPEG Sbjct: 250 CHITRTTAETHQLIRDNLHLTAIYGGVIDSKGPRYCPSIEDKIVRFADKESHQIFLEPEG 309 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 +T +Y G ST LPE IQ Q +R++PGLE+ ++RP Y+++YDY+ +L P+LETK+ Sbjct: 310 RDTPEIYVQGFSTGLPEPIQLQLLRSLPGLEQAVMLRPAYSVDYDYLPATQLKPSLETKR 369 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 + GLF AGQ+NGTTGYEEAAAQGLVAG+N+AR + D + F R SYIG MIDDL S+ Sbjct: 370 VRGLFSAGQLNGTTGYEEAAAQGLVAGLNAARLIGEQDPVHFPREGSYIGTMIDDLVSQD 429 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 + EPYR+ TSR+EYR+ LR DNAD RLTP+G +LG I +RR + F +Q + L+ Sbjct: 430 LREPYRVLTSRSEYRLILRGDNADRRLTPLGRELGLIDDRRWQLFEDKLQAMEGEKQRLE 489 Query: 480 SLVLTSKNLSSTSISFKQDGKTR---TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 ++ L + + ++ + + T + L P +L V E Sbjct: 490 TVRLKVSDPVAPAVEQETGAAIKGSITLADLLRRPAMHAADLVRHGLADGALPLPVREGA 549 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y+ Y RQ + ++K + +R +P D +Y+S+ LSNE +EKLS ++P L QA+ Sbjct: 550 EIDIKYSGYLQRQQQQIDQVKRQSQRKLPSDLNYASIGTLSNEAREKLSAIQPTTLGQAN 609 Query: 597 KIEGMTPAALNLLLIYIK 614 +I G++ A + LL++++ Sbjct: 610 RIPGVSQADITALLMWLE 627 >gi|33241285|ref|NP_876227.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|81170569|sp|Q7V9J7|MNMG_PROMA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|33238815|gb|AAQ00880.1| NAD/FAD-utilizing enzyme apparently [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 667 Score = 499 bits (1286), Expect = e-139, Method: Compositional matrix adjust. Identities = 274/633 (43%), Positives = 379/633 (59%), Gaps = 28/633 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAGCEAA AKLG STAL T I CNPA+GG K LV E+DAL Sbjct: 11 FDVIVVGGGHAGCEAAIATAKLGLSTALFTLNLDRIAWQPCNPAVGGPAKSQLVHEVDAL 70 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G++GR+AD+ +Q R+LN +GPAV R Q D+ Y + M + + NL + + V Sbjct: 71 GGVIGRLADSTALQKRILNASRGPAVWALRAQTDKRQYSIEMLQMLQETPNLSLREAMVT 130 Query: 126 GF--------------NTEKNI--ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKI 169 + EK I + I S+ V+LTTGTFL+G I IG + Sbjct: 131 DLEIKSSPNRKKIKEQSEEKTIGQVQGIKTYFGSIYLAKAVILTTGTFLKGKIWIGNQSM 190 Query: 170 PAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM 229 AGR G+ + L + K F+T RLKTGTP R+D +TI E+Q +D FSF Sbjct: 191 DAGRAGEQAATGLTEALQKLGFETSRLKTGTPPRVDRRTIDLGSLEEQKSDAADRFFSFD 250 Query: 230 TDKI-TNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGER 288 ++ + +Q+ C +TRT +TH++I N+ + IY G I S GPRYCPSIEDKIVRF ++ Sbjct: 251 PERWKSGQQMSCYMTRTTQKTHQLIKNNLHLTPIYGGFINSKGPRYCPSIEDKIVRFSDK 310 Query: 289 NGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINP 348 HQIFLEPEG NT +Y G+ST LPE +Q Q +RT+PGL+ ++RP YA+EYDY+ Sbjct: 311 ESHQIFLEPEGRNTPEIYIQGLSTGLPEGMQLQLLRTLPGLKNCVMLRPAYAVEYDYLPA 370 Query: 349 KELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYI 408 +L +LETKKI GLF AGQ+NGTTGYEEAAAQGLVAG+N+AR N D I F R +SYI Sbjct: 371 TQLLASLETKKIEGLFSAGQLNGTTGYEEAAAQGLVAGLNAARYVNNQDAIIFPREESYI 430 Query: 409 GVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYI 468 G MIDDL K + EPYR+ TSR+EYR+ LR DNAD RLTP+G K+G + + + F I Sbjct: 431 GTMIDDLIKKDLREPYRVLTSRSEYRLILRGDNADRRLTPLGYKVGLVNDYQWNIFQ--I 488 Query: 469 QEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTR-------TAYEFLSYPDFSIQNLFSI 521 ++ N + K + + S I+ K + ++ T L P + NL Sbjct: 489 KQSNMEKE--KKRLEQQRIKDSDPIALKIEKESGASIKGSITLANLLRRPGMHMNNLIRH 546 Query: 522 CPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELK 581 V E ++I+ Y+ Y RQ ++ ++IK + KR +P + +Y+++ LS E + Sbjct: 547 KLANNSLPLDVREGVEIDIKYSGYLKRQNLQIEQIKKQNKRALPSEVNYTNIKTLSQEAR 606 Query: 582 EKLSILKPFNLLQASKIEGMTPAALNLLLIYIK 614 EKL+ +P +AS++ G++ A L+ LLI++K Sbjct: 607 EKLNATQPKTFGEASQLPGVSKADLSALLIWLK 639 >gi|146319817|ref|YP_001199529.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus suis 05ZYH33] gi|146322008|ref|YP_001201719.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus suis 98HAH33] gi|253752794|ref|YP_003025935.1| glucose inhibited division protein A [Streptococcus suis SC84] gi|253754619|ref|YP_003027760.1| glucose inhibited division protein A [Streptococcus suis P1/7] gi|253756552|ref|YP_003029692.1| glucose inhibited division protein A [Streptococcus suis BM407] gi|166200624|sp|A4W4N0|MNMG_STRS2 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|166200626|sp|A4VYE0|MNMG_STRSY RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|145690623|gb|ABP91129.1| NAD/FAD-utilizing enzyme apparently involved in cell division [Streptococcus suis 05ZYH33] gi|145692814|gb|ABP93319.1| NAD/FAD-utilizing enzyme apparently involved in cell division [Streptococcus suis 98HAH33] gi|251817083|emb|CAZ52735.1| glucose inhibited division protein A [Streptococcus suis SC84] gi|251819016|emb|CAZ56863.1| glucose inhibited division protein A [Streptococcus suis BM407] gi|251820865|emb|CAR47631.1| glucose inhibited division protein A [Streptococcus suis P1/7] gi|292559414|gb|ADE32415.1| Glucose-inhibited division protein A subfamily [Streptococcus suis GZ1] gi|319759212|gb|ADV71154.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus suis JS14] Length = 638 Score = 499 bits (1286), Expect = e-139, Method: Compositional matrix adjust. Identities = 269/617 (43%), Positives = 379/617 (61%), Gaps = 8/617 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIG GHAG EA A+++G T L T + M CNP+IGG KG +VREIDA Sbjct: 8 NYDVIVIGAGHAGVEAGLAASRMGCKTLLATINLDMVAFMPCNPSIGGSAKGIVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ ++LN+ KGPAVR R QAD+ Y M+R + QENL + Q + Sbjct: 68 LGGEMGRNIDKTYIQMKMLNMGKGPAVRALRAQADKAEYASEMKRTVERQENLTLRQTMI 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + N VV+TTGT LRG I IG LK +G S +L + Sbjct: 128 DEILVEDGKVIGVRTATNQKFSAKAVVVTTGTALRGEIIIGDLKYSSGPNNSLASITLAD 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT---DKITNRQIECG 241 + + + GR KTGTP R++ +TI ++ TE Q DE+ FSF++ D + + QI C Sbjct: 188 NLKELGLEIGRFKTGTPPRVNARTINYEDTEIQPGDEKPNHFSFLSKDEDYLLD-QIPCW 246 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN +H II N+ + ++SG +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG N Sbjct: 247 LTYTNATSHEIINSNLHRAPMFSGIVKGIGPRYCPSIEDKIVRFADKERHQLFLEPEGRN 306 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 TD +Y G+ST+LPE++Q I +I GLE ++R GYAIEYD + P +L TLETKKIS Sbjct: 307 TDEIYVQGLSTSLPEDVQQDLIHSIKGLENAQMMRTGYAIEYDMVMPHQLRATLETKKIS 366 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQ NGT+GYEEAA QG+VAGIN+A K + R+D YIGVMIDDL +KG + Sbjct: 367 GLFTAGQTNGTSGYEEAAGQGIVAGINAALKVQGKPELILKRSDGYIGVMIDDLVTKGTV 426 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAEYR+ LR DNAD RLT IG ++G + + R + F + +++ L+S+ Sbjct: 427 EPYRLLTSRAEYRLILRHDNADMRLTEIGRQVGLVDDERWQVFQIHKNQFDNEMKRLESI 486 Query: 482 VL---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQ 537 L N ++ FK TA EF+ PD + + + I P A + IE ++ Sbjct: 487 KLKPIKETNEKVVAMGFKPLTDALTAKEFMRRPDVTYADAVAFIGPAAEDLDAKTIELIE 546 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 E Y Y + + + +++K E++ IP D D+ + +++ E ++K ++ P + QAS+ Sbjct: 547 TEVKYEGYIAKALDQVEKMKRMEEKRIPADIDWDDIDSIATEARQKFKLISPETIGQASR 606 Query: 598 IEGMTPAALNLLLIYIK 614 I G+ PA +++L++Y++ Sbjct: 607 ISGVNPADISILMVYLE 623 >gi|315612259|ref|ZP_07887173.1| glucose inhibited division protein A [Streptococcus sanguinis ATCC 49296] gi|315315652|gb|EFU63690.1| glucose inhibited division protein A [Streptococcus sanguinis ATCC 49296] Length = 637 Score = 499 bits (1286), Expect = e-139, Method: Compositional matrix adjust. Identities = 259/615 (42%), Positives = 373/615 (60%), Gaps = 6/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DAL Sbjct: 9 YDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + D IQ ++LN KGPAVR R QAD+ELY M++ + +QENL + Q + Sbjct: 69 GGEMAKTIDKTYIQMKMLNTGKGPAVRALRAQADKELYSKEMRKTVENQENLTLRQTMID 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + V++TTGT LRG I IG LK +G S +L ++ Sbjct: 129 EILVEDGKVVGVRTATHQEYAAKAVIVTTGTALRGEIIIGDLKYSSGPNHSLASINLADN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 + + GR KTGTP R+ +I +D TE Q DE FS+ + + Q+ C +T Sbjct: 189 LKELGLEIGRFKTGTPPRVKASSINYDVTEIQPGDEAPNHFSYTSRDEDYVKDQVPCWLT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +H II N+ + +++G +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG NT+ Sbjct: 249 YTNGTSHEIIQNNLHRAPMFTGVVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRNTE 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE++Q + + +I GLE ++R GYAIEYD + P +L TLETKKISGL Sbjct: 309 EVYVQGLSTSLPEDVQRELVHSIKGLENAEMMRTGYAIEYDMVLPHQLRATLETKKISGL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMIDDL +KG +EP Sbjct: 369 FTAGQTNGTSGYEEAAGQGIIAGINAALKIQGKPELILKRSDGYIGVMIDDLVTKGTIEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G ++G + + R RF +++ L S+ L Sbjct: 429 YRLLTSRAEYRLILRHDNADMRLTEMGREIGLVDDERWARFEIKKNQFDNEMKRLDSIKL 488 Query: 484 ---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQIE 539 N ++ FK TA EFL P+ S Q++ + I P A +IE ++ E Sbjct: 489 KPVKETNAKVEAMGFKPLTDAVTAKEFLRRPEVSYQDVVAFIGPAAEDLDDKIIELIETE 548 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + M + ++K E++ IP + D+ + +++ E ++K ++ P + QAS+I Sbjct: 549 IKYEGYISKAMDQVAKMKRMEEKRIPANIDWDDIDSIATEARQKFKLINPETIGQASRIS 608 Query: 600 GMTPAALNLLLIYIK 614 G+ PA +++L++Y++ Sbjct: 609 GVNPADISILMVYLE 623 >gi|253581094|ref|ZP_04858354.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251847630|gb|EES75600.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 634 Score = 499 bits (1286), Expect = e-139, Method: Compositional matrix adjust. Identities = 261/613 (42%), Positives = 373/613 (60%), Gaps = 5/613 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD++V+G GHAGCEAA A+LG +T + T +I M CNP +GG KGHLVRE+DAL Sbjct: 18 YDIVVVGAGHAGCEAALAGARLGLNTVMFTVSVDSIALMPCNPNVGGSSKGHLVRELDAL 77 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ D IQ ++LN KGPAV R QAD++ Y M++ + + NL + QGEV Sbjct: 78 GGEMGKNIDKTFIQSKMLNCSKGPAVHSLRAQADKQAYSNEMRKTLENTPNLTIKQGEVT 137 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E I+ + + C VVL TGT+L+ G + G G +N L +S Sbjct: 138 KLLVEDGKITGVKTYSGATYNCKAVVLCTGTYLKARCIYGDVSNYTGPNGLQAANYLTDS 197 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 + + R KTGTPAR+ G TI + K E+QF DER++PFSF T + + Q C +T Sbjct: 198 LKELGIEMFRFKTGTPARIAGNTIDYSKMEEQFGDERVVPFSFSTNPEDVQIEQKSCWLT 257 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH II N+ S +YSG I+ GPRYCPSIEDK+VRF ++N HQ+F+EPEGL T+ Sbjct: 258 YTNEKTHEIIRANLDRSPLYSGMIEGTGPRYCPSIEDKVVRFADKNRHQVFIEPEGLYTN 317 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G+S++LPE++Q + ++PGLE I++ YAIEYD INP++L+PTLE KKI GL Sbjct: 318 EMYIGGMSSSLPEDVQEEMYHSVPGLEHAKIVKNAYAIEYDCINPRQLYPTLEFKKIKGL 377 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F GQ NG++GYEEAAAQGL+AGIN+A + + + R+++YIGV+IDDL +K EP Sbjct: 378 FSGGQFNGSSGYEEAAAQGLIAGINAALEVKGQEQLILDRSEAYIGVLIDDLVTKENHEP 437 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR-QKRFAKYIQEYNFLRSLLKSLV 482 YRM TSRAEYR+ LR DNAD RL G + G I E QK K Q + + + + Sbjct: 438 YRMMTSRAEYRLLLRQDNADLRLRKKGYQAGLISEEDYQKILTKEEQIKTEISRVEHTNI 497 Query: 483 LTSKNLSSTSISFKQD--GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 +K + + S+ T E + P+ S + + + + + V E++ I Sbjct: 498 GANKEVQTLLESYNSTPLKSGTTLAELIRRPELSYEAIKPLDKERPELPWDVQEQVDINI 557 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ+ + ++ K E + IP D DY + +L E ++KL +P ++ QAS+I G Sbjct: 558 KYDGYIRRQLKQVEQFKKLEAKKIPTDLDYEKVGSLRIEARQKLEAYRPISIGQASRISG 617 Query: 601 MTPAALNLLLIYI 613 ++PA +++LL+Y+ Sbjct: 618 VSPADISVLLVYL 630 >gi|94991466|ref|YP_599566.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pyogenes MGAS10270] gi|166200621|sp|Q1JED6|MNMG_STRPD RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|94544974|gb|ABF35022.1| Putative tRNA (5-carboxymethylaminomethyl-2-thiouridylate) synthase subunit GidA [Streptococcus pyogenes MGAS10270] Length = 632 Score = 499 bits (1286), Expect = e-139, Method: Compositional matrix adjust. Identities = 270/618 (43%), Positives = 373/618 (60%), Gaps = 6/618 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAG EA+ +++G T L T + M CNP+IGG KG +VREIDA Sbjct: 8 SYDVIVIGAGHAGVEASLATSRMGCKTLLATINLDMLAFMPCNPSIGGSAKGIVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ ++LN KGPAVR R QAD+ LY M+ + Q NL + Q + Sbjct: 68 LGGEMGKNIDKTYIQMKMLNTGKGPAVRALRAQADKSLYAREMKHTVEKQANLTLRQTMI 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ VV+TTGT LRG I +G+LK +G S +L + Sbjct: 128 DDILVEDGRVVGVLTATGQKFAAKAVVVTTGTALRGEIILGELKYSSGPNNSLASVTLAD 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--NRQIECGI 242 + K + GR KTGTP R+ +I +D+TE Q D++ FSFM+ QI C + Sbjct: 188 NLKKLGLEIGRFKTGTPPRVKASSINYDQTEIQPGDDKPNHFSFMSKDADYLKDQIPCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +H II +N+ + ++SG +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG +T Sbjct: 248 TYTNQTSHDIINQNLYRAPMFSGVVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRDT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q I +I GLEK ++R GYAIEYD + P +L TLETK ISG Sbjct: 308 EEVYVQGLSTSLPEDVQKDLIHSIKGLEKAEMMRTGYAIEYDIVLPHQLRATLETKLISG 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQ NGT+GYEEAA QGL+AGIN+A K + R+D+YIGVMIDDL +KG LE Sbjct: 368 LFTAGQTNGTSGYEEAAGQGLIAGINAALKVQGKPELILKRSDAYIGVMIDDLVTKGTLE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFA-KYIQEYNFLRSL--LK 479 PYR+ TSRAEYR+ LR DNAD RLT IG +G + + R K F K Q N L+ L +K Sbjct: 428 PYRLLTSRAEYRLILRHDNADMRLTEIGRDIGLVDDERWKAFEIKKNQFDNELKRLDSIK 487 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQI 538 + N + FK TA EF+ P+ S + P A + +IE L+ Sbjct: 488 LKPIKETNDRVQDLGFKPLTDAMTAKEFMRRPEIDYATAVSFVGPAAEDLDAKIIELLET 547 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E Y Y + + + ++K E++ IP + D+ ++ +++ E ++K + P + QAS+I Sbjct: 548 EIKYEGYIRKALDQVAKMKRMEEKRIPANIDWDAIDSIATEARQKFKKINPETIGQASRI 607 Query: 599 EGMTPAALNLLLIYIKKN 616 G+ PA +++L+IY++ N Sbjct: 608 SGVNPADISILMIYLEGN 625 >gi|15611269|ref|NP_222920.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Helicobacter pylori J99] gi|7674056|sp|Q9ZML9|MNMG_HELPJ RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|4154720|gb|AAD05783.1| GLUCOSE INHIBITED DIVISION PROTEIN A [Helicobacter pylori J99] Length = 621 Score = 499 bits (1286), Expect = e-139, Method: Compositional matrix adjust. Identities = 278/627 (44%), Positives = 373/627 (59%), Gaps = 16/627 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M+ S D++V+GGGHAG EA+ +AAK+G LIT TIG SCNPAIGGLGKGHL + Sbjct: 1 MVKES-DILVVGGGHAGIEASLIAAKMGVRVHLITMLIDTIGLASCNPAIGGLGKGHLTK 59 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+D L G MG + D +G+Q+RVLN KGPAVRG R Q D + YR+ + +L+ NL V Sbjct: 60 EVDVLGGAMGIITDHSGLQYRVLNASKGPAVRGTRAQIDMDTYRIFARNLVLNTPNLSVS 119 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q E + + + N+ R V++TTGTFL+GV+HIG+ + GR G++ SN Sbjct: 120 QEMTESLILENDEVVGVTTNINNTYRAKKVIITTGTFLKGVVHIGEHQNQNGRFGENASN 179 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 SL + + F RLKTGT R+ G +I ++ E+ F D FS+ T Q+ C Sbjct: 180 SLALNLRELGFKVERLKTGTCPRVAGNSIDFEGLEEHFGDANPPYFSYKTKDFNPTQLSC 239 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN TH+II +N + ++SG I+ GPRYCPSIEDKI RF E+ HQ+FLEP+ + Sbjct: 240 FITYTNPITHQIIRDNFHRAPLFSGQIEGIGPRYCPSIEDKINRFSEKERHQLFLEPQTI 299 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + Y NG+ST+LP ++Q + I +I GLE I R GYAIEYD+I P EL LETKKI Sbjct: 300 HKSEYYINGLSTSLPLDVQEKVIHSIKGLENALITRYGYAIEYDFIQPTELTHALETKKI 359 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GL+LAGQINGTTGYEEAAAQGL+AGIN+ R ++YIGV+IDDL +KG Sbjct: 360 KGLYLAGQINGTTGYEEAAAQGLMAGINAVLALKNQAPFILKRNEAYIGVLIDDLVTKGT 419 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DN RL +LG + + K K Q LK Sbjct: 420 NEPYRMFTSRAEYRLLLREDNTLFRLGEHAYRLGLMEQDFYKELEKDKQAIQENLKRLKE 479 Query: 481 LVLTS--------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV 532 VLT L I+ K DG + L+ F+++ + S + V Sbjct: 480 CVLTPSKEVLKRLNELGENPINDKMDGVS-----LLARDSFNLEKMRSFFSFLVPLNERV 534 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 +E+++IE Y Y +Q ++ K IPK F + +P LS E EKL +P +L Sbjct: 535 LEQIKIECKYNIYIEKQHENIAKMDSMLKVSIPKHFVFKGIPGLSLEAVEKLEKFRPKSL 594 Query: 593 LQASKIEGMTPAALNLLLIYI--KKNT 617 +AS+I G+TPA L++L +YI +KN+ Sbjct: 595 FEASEISGITPANLDVLHLYIHLRKNS 621 >gi|325695736|gb|EGD37635.1| glucose inhibited division protein A [Streptococcus sanguinis SK150] Length = 659 Score = 499 bits (1286), Expect = e-139, Method: Compositional matrix adjust. Identities = 263/626 (42%), Positives = 382/626 (61%), Gaps = 26/626 (4%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYD+IVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DA Sbjct: 32 SYDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDA 91 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M + D + IQ ++LN KGPAVR R QAD+E+Y M++ + +QENL + Q Sbjct: 92 LGGEMAKNIDKSYIQMKMLNTGKGPAVRALRAQADKEVYSKEMRKTVENQENLTLRQ--- 148 Query: 125 AGFNTEKNIISSIVMQDNSMIRCST----------VVLTTGTFLRGVIHIGKLKIPAGRM 174 +I+ I+++D +I T V++TTGT LRG I IG LK +G Sbjct: 149 -------TMINEILVEDGKVIGVKTATHQEYAAKAVIVTTGTALRGEIIIGDLKYSSGPN 201 Query: 175 GDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DK 232 + L ++ F+ GR KTGTP R+ +I +D TE Q DE+ FS+ + + Sbjct: 202 HSLAAIPLADNLRDLGFEIGRFKTGTPPRVKASSINYDVTEIQPGDEKANHFSYTSRDED 261 Query: 233 ITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQ 292 Q+ C +T TN E+H II N+ + ++SG +K GPRYCPSIEDKIVRF ++ HQ Sbjct: 262 YVKDQVPCWLTYTNAESHEIIQNNLHRAPMFSGIVKGVGPRYCPSIEDKIVRFADKERHQ 321 Query: 293 IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF 352 +FLEPEG +T+ VY G+ST+LPE++Q + +I GLE ++R GYAIEYD I P +L Sbjct: 322 LFLEPEGRDTEEVYVQGLSTSLPEDVQKDLVHSIKGLENAEMMRTGYAIEYDMIMPHQLR 381 Query: 353 PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMI 412 TLETKKISGLF AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMI Sbjct: 382 VTLETKKISGLFTAGQTNGTSGYEEAAGQGIIAGINAALKIQGKPELILKRSDGYIGVMI 441 Query: 413 DDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYN 472 DDL +KG +EPYR+ TSRAEYR+ LR DNAD RLT +G ++G + + R RF +++ Sbjct: 442 DDLVTKGTVEPYRLLTSRAEYRLILRHDNADMRLTEMGREIGLVDDERWARFEIKKNQFD 501 Query: 473 FLRSLLKSLVL---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKF 528 L+S+ L N ++ FK TA EF+ P+ S Q++ I P A + Sbjct: 502 NEMKRLESIKLKPVKETNAKVEALGFKPLTDAVTAKEFMRRPEVSYQDVVQFIGPAAEEL 561 Query: 529 SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 +IE ++ E Y Y + + + +++K E++ IP + D+ + +++ E ++K + Sbjct: 562 DEKIIELIETEIKYEGYISKALDQVEKMKRMEEKRIPANIDWDDIDSIATEARQKFKKIN 621 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIK 614 P + QAS+I G+ PA +++L++Y++ Sbjct: 622 PETIGQASRISGVNPADISILMVYLE 647 >gi|325567649|ref|ZP_08144316.1| glucose inhibited division protein A [Enterococcus casseliflavus ATCC 12755] gi|325159082|gb|EGC71228.1| glucose inhibited division protein A [Enterococcus casseliflavus ATCC 12755] Length = 640 Score = 499 bits (1286), Expect = e-139, Method: Compositional matrix adjust. Identities = 268/628 (42%), Positives = 383/628 (60%), Gaps = 16/628 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+G GHAG EAA A+++GA T L+T + M CNP++GG KG +VREIDA Sbjct: 18 SYDVIVVGAGHAGSEAALAASRMGAKTLLLTINLDMVAFMPCNPSVGGPAKGVVVREIDA 77 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ R+LN KGPAVR R QAD+ Y M+R I + NL + QG V Sbjct: 78 LGGEMGKNIDKTYIQMRMLNTGKGPAVRALRAQADKHAYAAEMKRTIEKEANLTLRQGIV 137 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E+ +V + + VV+T GT LRG I IG+LK +G PS L + Sbjct: 138 EKLIVEEGECRGVVTSTGARYQAQAVVITAGTALRGEIIIGELKYSSGPNNSQPSIGLAD 197 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNRQIE-CGI 242 + + R KTGTP R+ TI ++ TE Q DE+ FS+ T D+ N+ E C + Sbjct: 198 HLKELGLEIARFKTGTPPRVKSSTINYEVTEIQPGDEQPNHFSYSTPDEAYNQNQEPCWL 257 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH+II +N+ + +++G ++ G RYCPSIEDKIVRF +++ HQ+FLEPEGLNT Sbjct: 258 TYTNEGTHQIINQNLHRAPMFTGIVEGVGARYCPSIEDKIVRFADKSRHQLFLEPEGLNT 317 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST++PE++Q Q + +I GLEK ++R GYAIEYD + P +L PTLETK I Sbjct: 318 EEVYVQGLSTSMPEDVQVQMLHSIAGLEKAEMMRTGYAIEYDVVVPHQLRPTLETKVIEN 377 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQ NGT+GYEEAA QGL+AGIN+A K + R+D YIGVMIDDL +KG E Sbjct: 378 LFTAGQTNGTSGYEEAAGQGLIAGINAALKIQGKEPFIMKRSDGYIGVMIDDLVTKGTNE 437 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYR+ TSRAEYR+ LR DNAD RLT +G ++G + E ++ Y+ + + + +K L Sbjct: 438 PYRLLTSRAEYRLLLRHDNADLRLTEVGHQIGLVPE---AQYEAYVAKKEAVEAEIKRLS 494 Query: 483 L--------TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIE 534 L++ + +DG A EFL P+ + + IE Sbjct: 495 KIRIKPTPEVQAYLTAKGTATLKDGV--LANEFLRRPEVTYAEMLQFIEANEALKPKEIE 552 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y + + + +++K E + IP++ DY+++ L+ E K+KL ++P + Q Sbjct: 553 QVEIQIKYEGYIKKALEKVEKLKRMEAKRIPENIDYAAINGLATEAKQKLQKIQPETIAQ 612 Query: 595 ASKIEGMTPAALNLLLIYIKKNT-VKLN 621 AS+I G+ PA +++L++YI++ VK+N Sbjct: 613 ASRISGVNPADISILMVYIEQGKIVKVN 640 >gi|238917974|ref|YP_002931491.1| glucose inhibited division protein A [Eubacterium eligens ATCC 27750] gi|238873334|gb|ACR73044.1| glucose inhibited division protein A [Eubacterium eligens ATCC 27750] Length = 627 Score = 499 bits (1286), Expect = e-139, Method: Compositional matrix adjust. Identities = 269/620 (43%), Positives = 371/620 (59%), Gaps = 9/620 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 I YDV+V+G GHAGCEAA AA++G T + T +I M CNP IGG KGHLVRE Sbjct: 4 IREEYDVVVVGAGHAGCEAALAAARMGLETIIFTVSVESIAMMPCNPNIGGSSKGHLVRE 63 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G MG+ DA IQ ++LN KGPAV R QAD+ Y M+ + + E+L + Q Sbjct: 64 IDALGGEMGKNIDATFIQSKMLNASKGPAVHSLRAQADKSDYSRRMRNVLENTEHLHIRQ 123 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 EV+ I + + VVL TG +L+ G + G G +N Sbjct: 124 AEVSEIIVNDGKIGGVKTVSGAEYIAKAVVLCTGVYLKARCIYGDVSYHTGPNGLQAANH 183 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KITNRQIE 239 L S + + R KTGTPAR+D +++ + K +QF D+R++PFSF TD I Q+ Sbjct: 184 LTQSLIDNGIEVRRFKTGTPARVDKRSVDFSKMTEQFGDKRVVPFSFETDPESIQKDQVS 243 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +T TN ETH+IIM+N+ S +YSGDI GPRYCPSIEDK+VRF +++ HQ+F+EPEG Sbjct: 244 CWLTYTNEETHKIIMDNLDRSPLYSGDIHGTGPRYCPSIEDKVVRFADKDRHQVFIEPEG 303 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T+ +Y G+S+++PE++Q+ RT+PGLE V I+R YAIEYD IN +L +LE KK Sbjct: 304 LYTNEMYLGGMSSSMPEDVQYAMYRTVPGLENVRIVRNAYAIEYDCINAVQLKSSLEFKK 363 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF GQ NG++GYEEAAAQG++AGIN+A K + + R++SYIGV+IDDL +K Sbjct: 364 IEGLFAGGQFNGSSGYEEAAAQGIIAGINAALFVKKEEPLILDRSESYIGVLIDDLVTKE 423 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRM TSRAEYR+ LR DNAD RLT G ++G I E R R + IQ + +K Sbjct: 424 TAEPYRMMTSRAEYRLILRQDNADIRLTKYGYRVGLISEERMNRLTRKIQLIDEEIERVK 483 Query: 480 SLVLTSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIE 534 S+ + + S +G T T E + P+ S L I + V E Sbjct: 484 SVNIGTG--SEVQKVLTDNGSTELTTGATLAELIRRPELSYDVLAPIDKHRPELPWDVCE 541 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 ++ I Y Y RQ+ + + K E +LIP DY + L E +KL +P ++ Q Sbjct: 542 QVNINLKYEGYIDRQLRQVEHFKKLENKLIPDSLDYLGISGLRKEAMQKLDKFRPRSIGQ 601 Query: 595 ASKIEGMTPAALNLLLIYIK 614 AS+I G++PA +++LL+Y++ Sbjct: 602 ASRISGVSPADISVLLVYLE 621 >gi|225869457|ref|YP_002745405.1| glucose inhibited division protein A [Streptococcus equi subsp. zooepidemicus] gi|225702733|emb|CAX00877.1| glucose inhibited division protein A [Streptococcus equi subsp. zooepidemicus] Length = 632 Score = 499 bits (1286), Expect = e-139, Method: Compositional matrix adjust. Identities = 269/619 (43%), Positives = 377/619 (60%), Gaps = 8/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+G GHAG EA+ A+++G T L T + M CNP+IGG KG +VREIDA Sbjct: 8 SYDVIVVGAGHAGVEASLAASRMGCKTLLATINLDMLAFMPCNPSIGGSAKGIVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ ++LN KGPAVR R QAD+ LY M+ + QENL + Q + Sbjct: 68 LGGEMGKNIDKTYIQMKMLNTGKGPAVRALRAQADKSLYAREMKHTVEKQENLTLRQSMI 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ V++TTGT LRG I +G+LK +G S +L + Sbjct: 128 DDILVENGKVVGVLTATGQKYAAQAVIITTGTALRGEIILGELKYSSGPNNSLASVTLAD 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT---DKITNRQIECG 241 + + + GR KTGTP R+ +I ++ TE Q D FSFM+ D + N QI C Sbjct: 188 NLKRLGLEIGRFKTGTPPRVKASSIDYEVTEIQPGDVTPNHFSFMSKDKDYLAN-QIPCW 246 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN +H II +N+ + ++SG +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG + Sbjct: 247 LTYTNQISHDIITKNLYRAPMFSGVVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGFD 306 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ VY G+ST+LPE++Q + + +I GLE ++R GYAIEYD + P +L TLETK IS Sbjct: 307 TEEVYVQGLSTSLPEDVQKELVHSIKGLENAEMMRTGYAIEYDIVLPHQLRATLETKMIS 366 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQ NGT+GYEEAA QGLVAGIN+A K + R+D+YIGVMIDDL +KG L Sbjct: 367 GLFTAGQTNGTSGYEEAAGQGLVAGINAALKVQGKPELILKRSDAYIGVMIDDLVTKGTL 426 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFA-KYIQEYNFLRSL--L 478 EPYR+ TSRAEYR+ LR DNAD RLT IG ++G + + R F K Q N L+ L + Sbjct: 427 EPYRLLTSRAEYRLILRHDNADMRLTEIGRQIGLVDDERWSAFEIKKNQFDNELKRLDSI 486 Query: 479 KSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQ 537 K + N + FK TA EF+ P+ + S I P A + + +IE L+ Sbjct: 487 KLKPIKETNARVQKLGFKPLTDAMTAKEFMRRPEVDYATVVSFIGPAAEELDAKMIELLE 546 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 E Y Y + + + ++K E++ IPK D+ ++ +++ E ++K + P + QAS+ Sbjct: 547 TEIKYEGYIKKALDQVAKMKRMEEKRIPKTIDWDAIDSIATEARQKFKKINPETIGQASR 606 Query: 598 IEGMTPAALNLLLIYIKKN 616 I G+ PA +++L++Y++ N Sbjct: 607 ISGVNPADISILMVYLEGN 625 >gi|154175126|ref|YP_001407617.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Campylobacter curvus 525.92] gi|112802522|gb|EAT99866.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Campylobacter curvus 525.92] Length = 631 Score = 499 bits (1286), Expect = e-139, Method: Compositional matrix adjust. Identities = 271/615 (44%), Positives = 369/615 (60%), Gaps = 9/615 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIV+GGGHAG EA+ AAK+G T LIT IG+ SCNPAIGGL KGHLV+EIDAL Sbjct: 16 FNVIVVGGGHAGIEASLAAAKMGKKTLLITILAEQIGAASCNPAIGGLAKGHLVKEIDAL 75 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG DA GIQFRVLN KGPAVRG R Q D + YR+ M+ +L+ NL++ Q Sbjct: 76 GGQMGLTTDAVGIQFRVLNESKGPAVRGSRAQIDMDRYRVYMRNLLLNTPNLEISQEIAT 135 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + I+ + ++ + +++TTGTFL G+IH+G K+ AGR+G+ S +L S Sbjct: 136 EILSANEQITGVKTHLGNVYETTKLIITTGTFLNGLIHVGFNKLKAGRVGELSSINLSQS 195 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + GRLKTGT R+D KTI + E+Q D + FSF T Q+ C I T Sbjct: 196 LRNLGLEMGRLKTGTCPRIDAKTIDFSVLERQEGDAKPAAFSFRTQHFAPEQLPCYIAYT 255 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N TH II N + +++G I+ GPRYCPSIEDKI RFG+R+ H +F+EP+ Sbjct: 256 NETTHEIIRSNFDKAPLFTGQIEGIGPRYCPSIEDKINRFGDRDRHHLFIEPQTREASEY 315 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG ST+LP ++Q +R++ G E I+R GYAIEYDY+ P EL +LETKK+ GL+L Sbjct: 316 YINGFSTSLPYDVQVAMLRSVRGFENARIVRHGYAIEYDYVVPTELKHSLETKKVRGLYL 375 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAAAQGL+AGIN+A + D + R ++YIGV+IDDL +KG EPYR Sbjct: 376 AGQINGTTGYEEAAAQGLMAGINAALNLDAKDPLVLRRDEAYIGVLIDDLVTKGTKEPYR 435 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL----LKSL 481 MFTSRAEYR+ LR DNA RL G +LG I + R + N + L + Sbjct: 436 MFTSRAEYRLLLREDNAILRLGGYGRELGLIDDETHARIEQI--RVNLAKGLEILNTREF 493 Query: 482 VLTSKNLSSTSISFKQD--GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + +NL + +D + T + ++ F+ + L + +E++ E Sbjct: 494 TPSKQNLEFLA-GLDEDVISEKVTLQKIVARKSFTSEKLRKLDAFFENLDEASLEQILTE 552 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y+ Y Q + ++K IP++F + + LSNE+ EKL P L AS+I Sbjct: 553 CKYSHYIAEQKNQIDKMKDMMSVKIPENFSFRGISGLSNEVVEKLEKFAPPTLFAASEIS 612 Query: 600 GMTPAALNLLLIYIK 614 G+TPAA+++L IYIK Sbjct: 613 GITPAAIDILHIYIK 627 >gi|326798714|ref|YP_004316533.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Sphingobacterium sp. 21] gi|326549478|gb|ADZ77863.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Sphingobacterium sp. 21] Length = 620 Score = 499 bits (1285), Expect = e-139, Method: Compositional matrix adjust. Identities = 281/620 (45%), Positives = 388/620 (62%), Gaps = 18/620 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 Y+VIV+G GHAGCEAAA AA LG+ LIT TI MSCNPA+GG+ KG +VREIDAL Sbjct: 5 YNVIVVGAGHAGCEAAAAAANLGSKVLLITMNMGTIAQMSCNPAMGGVAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G G +AD IQFR+LN+ KGPA+ PR+Q DR + + ++ S N+D Q V Sbjct: 65 GGYSGIIADKTTIQFRMLNLSKGPAMWSPRSQNDRMRFAEEWRLQLESLSNIDFWQDTVK 124 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 ++ ++ I VVLT GTFL G+IHIG+ K GR G+ + L Sbjct: 125 EIIVDQGRAKGVITSLGIRIEADAVVLTNGTFLNGIIHIGEKKFGGGRTGEKAATGLTEQ 184 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + F++GR+KTGTP R+DG+T+ + K E+Q+ DE+ FS+ + + + Q C IT T Sbjct: 185 LISIGFESGRMKTGTPPRVDGRTLDYTKMEEQWGDEKRGRFSYQSIDLPHEQRCCWITYT 244 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N H + E + S +++G IK GPRYCPSIEDKI RF ER+ HQIF+EPEG T + Sbjct: 245 NTNVHDTLKEGFEKSPMFTGRIKGLGPRYCPSIEDKINRFAERDRHQIFVEPEGWRTHEI 304 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG ST+LPE++Q + +R IPG E + RPGYAIEYDY P +L TLETKK+ LF Sbjct: 305 YVNGFSTSLPEDVQFKALRQIPGFENAKMFRPGYAIEYDYFPPMQLDLTLETKKVKNLFF 364 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAA+QGL+AGIN+ ++ N L + R++SYIGV+IDDL +KG EPYR Sbjct: 365 AGQINGTTGYEEAASQGLIAGINAHQRINDLHELILKRSESYIGVLIDDLVTKGTEEPYR 424 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYN-FLRSLLKSLVLT 484 MFTSRAE+R+ LR DNAD RLTP+ +LG E + I + + + L K+ V Sbjct: 425 MFTSRAEHRLLLRQDNADIRLTPLAHQLGLASEEALDKVKTKISKSDEIVEYLRKTSVEA 484 Query: 485 SK------NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARK----FSSLVIE 534 SK LSS+ ++ + + L+ P +I NL ++ FS +IE Sbjct: 485 SKMNPILEKLSSSPLT-----QNIKMFNVLTRPQLNIWNLAEANSSLKELLADFSEEIIE 539 Query: 535 RLQIESSYAAYTGRQM-IEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 + +I+ Y +Y +++ I K K E+K + P FDY+ L +LS E +EKL +KP L Sbjct: 540 QAEIKVKYDSYFDKEIEIVNKMKKMEDKEINPH-FDYNQLISLSKEAREKLIKIKPRTLG 598 Query: 594 QASKIEGMTPAALNLLLIYI 613 QAS+I G++PA +++L++++ Sbjct: 599 QASRISGVSPADVSVLMVHM 618 >gi|307705800|ref|ZP_07642643.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus mitis SK597] gi|307620632|gb|EFN99725.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus mitis SK597] Length = 637 Score = 499 bits (1285), Expect = e-139, Method: Compositional matrix adjust. Identities = 259/615 (42%), Positives = 372/615 (60%), Gaps = 6/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DAL Sbjct: 9 YDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + D IQ ++LN KGPAVR R QAD+ELY M++ + +QENL + Q + Sbjct: 69 GGEMAKTIDKTYIQMKMLNTGKGPAVRALRAQADKELYSKEMRKTVENQENLTLRQTMID 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + V++TTGT LRG I IG LK +G S +L ++ Sbjct: 129 EILVEDGKVVGVRTATHQEYAAKAVIVTTGTALRGEIIIGDLKYSSGPNHSLASINLADN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 + + GR KTGTP R+ +I +D TE Q DE FS+ + + Q+ C +T Sbjct: 189 LKELGLEIGRFKTGTPPRVKASSINYDVTEIQPGDEAPNHFSYTSRDEDYVKDQVPCWLT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +H II N+ + +++G +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG NT+ Sbjct: 249 YTNGTSHEIIQNNLHRAPMFTGVVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRNTE 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE++Q + + +I GLE ++R GYAIEYD + P +L TLETKKISGL Sbjct: 309 EVYVQGLSTSLPEDVQRELVHSIKGLENAEMMRTGYAIEYDMVLPHQLRATLETKKISGL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMIDDL +KG +EP Sbjct: 369 FTAGQTNGTSGYEEAAGQGIIAGINAALKIQDKPELILKRSDGYIGVMIDDLVTKGTIEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G ++G + + R RF +++ L S+ L Sbjct: 429 YRLLTSRAEYRLILRHDNADMRLTEMGREIGLVDDERWARFEIKKNQFDNEMKRLDSIKL 488 Query: 484 ---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQIE 539 N + FK TA EFL P+ S Q++ + I P A +IE ++ E Sbjct: 489 KPVKETNAKVEEMGFKPLTDAVTAKEFLRRPEVSYQDVVAFIGPAAEDLDDKIIELIETE 548 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + M + ++K E++ IP + D+ + +++ E ++K ++ P + QAS+I Sbjct: 549 IKYEGYISKAMDQVAKMKRMEEKRIPANIDWDDIDSIATEARQKFKLINPETIGQASRIS 608 Query: 600 GMTPAALNLLLIYIK 614 G+ PA +++L++Y++ Sbjct: 609 GVNPADISILMVYLE 623 >gi|325954631|ref|YP_004238291.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Weeksella virosa DSM 16922] gi|323437249|gb|ADX67713.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Weeksella virosa DSM 16922] Length = 623 Score = 499 bits (1285), Expect = e-139, Method: Compositional matrix adjust. Identities = 282/628 (44%), Positives = 387/628 (61%), Gaps = 31/628 (4%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+GGGHAG EAAA AA +G T LIT I MSCNPA+GG+ KG ++REIDA Sbjct: 6 SYDVIVVGGGHAGAEAAAAAANMGCKTLLITMNLQNIAQMSCNPAMGGIAKGQIIREIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADR----ELYRLAMQREILSQENLDVI 120 L G G + D IQF++LN+ KGPA+ PR Q+DR E +RLA+++ EN+D Sbjct: 66 LGGYSGIITDKTMIQFKMLNLSKGPAMWSPRAQSDRMRFAEEWRLALEK----TENIDFF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V + + ++ IR V+LT GTFL G+IH+G+ + GRMG+ + Sbjct: 122 QDMVKNLVVKNRKVEGVITNMGLEIRSKAVILTNGTFLNGLIHVGEKQFGGGRMGEGAAF 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 + ++ FD GR+KTGTP R+DG+++ + K +Q DE FS+ +Q C Sbjct: 182 GITEQLIELGFDAGRMKTGTPPRIDGRSLDFSKMMEQPGDENPGKFSYTETPKLTKQRSC 241 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 I+ TN E H ++ E S +++G IKS GPRYCPSIEDKI RF +++ HQIF EPEG Sbjct: 242 YISYTNQEVHDLLREGFDRSPMFNGTIKSIGPRYCPSIEDKINRFADKDRHQIFAEPEGW 301 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 NT Y NG ST+LP E+Q + IR+IPG EK RPGYAIEYDY P +L TLETK + Sbjct: 302 NTIEYYINGFSTSLPMEVQGKAIRSIPGFEKAKFFRPGYAIEYDYFPPTQLKHTLETKLV 361 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 L+ AGQINGTTGYEEAA+QGL+AGIN+A K + D R ++YIGV+IDDL +KGV Sbjct: 362 DNLYFAGQINGTTGYEEAASQGLIAGINAALKLQEKDPFILKRNEAYIGVLIDDLITKGV 421 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF-AKYIQEYNFLRSLLK 479 EPYRMFTSRAEYRI LR DNAD RLTPIG +LG ERR KR KY + + F+ + L+ Sbjct: 422 DEPYRMFTSRAEYRILLRQDNADERLTPIGYQLGLASERRMKRVEEKYSKAHAFI-NYLE 480 Query: 480 SLVLTSKNLSST-----SISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV-- 532 + +T K ++ T KQ K ++ P+ + + +I K +S V Sbjct: 481 NESVTPKQINPTIEERKGTPLKQANKMAAV---IARPELKLNDFLTI----EKIASYVEK 533 Query: 533 -------IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 +E +I+ Y Y ++ A ++ E IP + DY L +++ E ++KLS Sbjct: 534 NQLGDEELEEAEIQIKYRGYIKKEKNNADKLTRLENLKIPANIDYHQLNSMTIEARQKLS 593 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYI 613 ++P + QAS+I G++PA +++LLI++ Sbjct: 594 KIRPETVAQASRISGISPADISVLLIHM 621 >gi|168493830|ref|ZP_02717973.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae CDC3059-06] gi|221231052|ref|YP_002510204.1| glucose inhibited division protein A [Streptococcus pneumoniae ATCC 700669] gi|183576020|gb|EDT96548.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae CDC3059-06] gi|220673512|emb|CAR67992.1| glucose inhibited division protein A [Streptococcus pneumoniae ATCC 700669] gi|332076576|gb|EGI87038.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae GA17545] Length = 637 Score = 499 bits (1285), Expect = e-139, Method: Compositional matrix adjust. Identities = 260/615 (42%), Positives = 371/615 (60%), Gaps = 6/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DAL Sbjct: 9 YDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + D IQ ++LN KGPAVR R QAD+ELY M++ + +QENL + Q + Sbjct: 69 GGEMAKTIDKTYIQMKMLNTGKGPAVRALRAQADKELYSKEMRKTVENQENLTLRQTMID 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + V++TTGT LRG I IG LK +G S +L ++ Sbjct: 129 EILVEDGKVVGVRTATHQEYAAKAVIVTTGTALRGEIIIGDLKYSSGPNHSLASINLADN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 + + GR KTGTP R+ +I +D TE Q DE FS+ + + Q+ C +T Sbjct: 189 LKELGLEIGRFKTGTPPRVKASSINYDVTEIQPGDEAPNHFSYTSRDEDYVKDQVPCWLT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +H II N+ + +++G +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG NT+ Sbjct: 249 YTNGTSHEIIQNNLHRAPMFTGVVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRNTE 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE++Q + +I GLE ++R GYAIEYD I P +L TLETKKISGL Sbjct: 309 EVYVQGLSTSLPEDVQRDLVHSIKGLENAEMMRTGYAIEYDMILPHQLRATLETKKISGL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMIDDL +KG +EP Sbjct: 369 FTAGQTNGTSGYEEAAGQGIIAGINAALKIQDKPELILKRSDGYIGVMIDDLVTKGTIEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G ++G + + R RF +++ L S+ L Sbjct: 429 YRLLTSRAEYRLILRHDNADMRLTEMGREIGLVDDERWARFEIKKNQFDNEMKRLDSIKL 488 Query: 484 ---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQIE 539 N + FK TA EFL P+ S Q++ + I P A +IE ++ E Sbjct: 489 KPVKETNAKVEEMGFKPLTDAVTAKEFLRRPEVSYQDVVAFIGPAAEDLDDKIIELIETE 548 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + M + ++K E++ IP + D+ + +++ E ++K ++ P + QAS+I Sbjct: 549 IKYEGYISKAMDQVAKMKRMEEKRIPANIDWDDIDSIATEARQKFKLINPETIGQASRIS 608 Query: 600 GMTPAALNLLLIYIK 614 G+ PA +++L++Y++ Sbjct: 609 GVNPADISILMVYLE 623 >gi|307208732|gb|EFN86010.1| Protein MTO1-like protein, mitochondrial [Harpegnathos saltator] Length = 607 Score = 499 bits (1285), Expect = e-139, Method: Compositional matrix adjust. Identities = 272/610 (44%), Positives = 386/610 (63%), Gaps = 29/610 (4%) Query: 27 LGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVK 86 +GA T L+T K STIG MSCNP+ GG+GKGHL+RE+DALDG+ R+ D +GI +++LN + Sbjct: 1 MGAKTLLVTQKKSTIGEMSCNPSFGGIGKGHLMREVDALDGVCCRICDISGIHYKILNKR 60 Query: 87 KGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISS--IVMQDNSM 144 KGPAV G R Q DR+LY+ +Q E+ + L + + V + +S ++++D + Sbjct: 61 KGPAVWGLRAQIDRKLYKKHLQAELFNMPGLHICESSVEDLILANDSLSCRGVILKDGTK 120 Query: 145 IRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARL 204 I +VV+TTGTFL+G I+IG K PAGRM D PS L N+ + F GRLKTGTP RL Sbjct: 121 IFGDSVVITTGTFLKGQINIGLEKRPAGRMDDEPSIGLANTLDRLGFRVGRLKTGTPPRL 180 Query: 205 DGKTIIWDKTEKQFADERLIPFSFMTDKIT---NRQIECGITRTNLETHRIIMENIKHSA 261 + ++I + K K DE IPFSFM +K+ + Q+ +T TN +II +N+ + Sbjct: 181 EKESIDFTKCIKHLPDECPIPFSFMNNKVWLLPDEQVPTYLTYTNKNVAKIIRDNMHCNL 240 Query: 262 IYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQ 321 + +I GPRYCPSIE K++RF HQ++LE EGL++ ++YP+G+S LPEE Q + Sbjct: 241 HVTEEIT--GPRYCPSIESKVLRFATTT-HQVWLELEGLDSPLIYPSGLSCTLPEEKQVE 297 Query: 322 FIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQ 381 ++ I GLE + RPGY +EYDYI+P+EL LETKKI GLFLAGQINGTTGYEEAAAQ Sbjct: 298 LVKCILGLENARLARPGYGVEYDYIDPRELTSELETKKIPGLFLAGQINGTTGYEEAAAQ 357 Query: 382 GLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDN 441 G++AG+N+A K K + SRT+ YIGV+IDDLT++G EPYRMFTSRAE+R+SLRPDN Sbjct: 358 GIIAGVNAAAKVLKKPPLVISRTEGYIGVLIDDLTTQGTTEPYRMFTSRAEFRLSLRPDN 417 Query: 442 ADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSST-------SIS 494 AD+RLT G K+GC+ R R +N R + +++ L S + Sbjct: 418 ADHRLTEKGYKVGCVSRERMDR------TWNTQRKIQEAIQLLQSERQSNHKWRHMLKLK 471 Query: 495 FKQDGKTRTAYEFL--SYPDFSIQNLFSICPDARKF----SSLVIERLQIESSYAAYTGR 548 + + ++A++ L + + + L I P+ +L+I R++IE+ YA Sbjct: 472 HTKSIQNKSAFDILGNTNDEITFAQLAKILPELLGHLDGDPTLMI-RVEIEAKYAFVVAN 530 Query: 549 QMIEAKEIKFEEKRLIPKDFDYSSLPA-LSNELKEKLSILKPFNLLQASKIEGMTPAALN 607 Q + +I+ E+ +IP+D DY+S LSNE KEKL+ P + A+KI G+TP A+ Sbjct: 531 QQNQVDDIRRNEQMIIPEDIDYNSNELNLSNEDKEKLTKYLPRTIAAANKISGVTPIAIL 590 Query: 608 LLLIYIKKNT 617 LL YI+ + Sbjct: 591 KLLYYIRHRS 600 >gi|205831543|sp|A7GWM5|MNMG_CAMC5 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A Length = 619 Score = 499 bits (1285), Expect = e-139, Method: Compositional matrix adjust. Identities = 271/615 (44%), Positives = 369/615 (60%), Gaps = 9/615 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIV+GGGHAG EA+ AAK+G T LIT IG+ SCNPAIGGL KGHLV+EIDAL Sbjct: 4 FNVIVVGGGHAGIEASLAAAKMGKKTLLITILAEQIGAASCNPAIGGLAKGHLVKEIDAL 63 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG DA GIQFRVLN KGPAVRG R Q D + YR+ M+ +L+ NL++ Q Sbjct: 64 GGQMGLTTDAVGIQFRVLNESKGPAVRGSRAQIDMDRYRVYMRNLLLNTPNLEISQEIAT 123 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + I+ + ++ + +++TTGTFL G+IH+G K+ AGR+G+ S +L S Sbjct: 124 EILSANEQITGVKTHLGNVYETTKLIITTGTFLNGLIHVGFNKLKAGRVGELSSINLSQS 183 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + GRLKTGT R+D KTI + E+Q D + FSF T Q+ C I T Sbjct: 184 LRNLGLEMGRLKTGTCPRIDAKTIDFSVLERQEGDAKPAAFSFRTQHFAPEQLPCYIAYT 243 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N TH II N + +++G I+ GPRYCPSIEDKI RFG+R+ H +F+EP+ Sbjct: 244 NETTHEIIRSNFDKAPLFTGQIEGIGPRYCPSIEDKINRFGDRDRHHLFIEPQTREASEY 303 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG ST+LP ++Q +R++ G E I+R GYAIEYDY+ P EL +LETKK+ GL+L Sbjct: 304 YINGFSTSLPYDVQVAMLRSVRGFENARIVRHGYAIEYDYVVPTELKHSLETKKVRGLYL 363 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAAAQGL+AGIN+A + D + R ++YIGV+IDDL +KG EPYR Sbjct: 364 AGQINGTTGYEEAAAQGLMAGINAALNLDAKDPLVLRRDEAYIGVLIDDLVTKGTKEPYR 423 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL----LKSL 481 MFTSRAEYR+ LR DNA RL G +LG I + R + N + L + Sbjct: 424 MFTSRAEYRLLLREDNAILRLGGYGRELGLIDDETHARIEQI--RVNLAKGLEILNTREF 481 Query: 482 VLTSKNLSSTSISFKQD--GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + +NL + +D + T + ++ F+ + L + +E++ E Sbjct: 482 TPSKQNLEFLA-GLDEDVISEKVTLQKIVARKSFTSEKLRKLDAFFENLDEASLEQILTE 540 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y+ Y Q + ++K IP++F + + LSNE+ EKL P L AS+I Sbjct: 541 CKYSHYIAEQKNQIDKMKDMMSVKIPENFSFRGISGLSNEVVEKLEKFAPPTLFAASEIS 600 Query: 600 GMTPAALNLLLIYIK 614 G+TPAA+++L IYIK Sbjct: 601 GITPAAIDILHIYIK 615 >gi|15675920|ref|NP_270094.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pyogenes M1 GAS] gi|71911651|ref|YP_283201.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pyogenes MGAS5005] gi|21263681|sp|Q99XI8|MNMG_STRP1 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|13623159|gb|AAK34815.1| glucose inhibited division protein [Streptococcus pyogenes M1 GAS] gi|71854433|gb|AAZ52456.1| glucose inhibited division protein A [Streptococcus pyogenes MGAS5005] Length = 632 Score = 499 bits (1284), Expect = e-139, Method: Compositional matrix adjust. Identities = 270/618 (43%), Positives = 373/618 (60%), Gaps = 6/618 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAG EA+ +++G T L T + M CNP+IGG KG +VREIDA Sbjct: 8 SYDVIVIGAGHAGVEASLATSRMGCKTLLATINLDMLAFMPCNPSIGGSAKGIVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ ++LN KGPAVR R QAD+ LY M+ + Q NL + Q + Sbjct: 68 LGGEMGKNIDKTYIQMKMLNTGKGPAVRALRAQADKSLYAREMKHTVEKQANLTLRQTMI 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ VV+TTGT LRG I +G+LK +G S +L + Sbjct: 128 DDILVEDGRVVGVLTATGQKFAAKAVVVTTGTALRGEIILGELKYSSGPNNSLASVTLAD 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--NRQIECGI 242 + K + GR KTGTP R+ +I +D+TE Q D++ FSFM+ QI C + Sbjct: 188 NLKKLGLEIGRFKTGTPPRVKASSINYDQTEIQPGDDKPNHFSFMSKDADYLKDQIPCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +H II +N+ + ++SG +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG +T Sbjct: 248 TYTNQTSHDIINQNLYRAPMFSGIVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRDT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q I +I GLEK ++R GYAIEYD + P +L TLETK ISG Sbjct: 308 EEVYVQGLSTSLPEDVQKDLIHSIKGLEKAEMMRTGYAIEYDIVLPHQLRATLETKLISG 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQ NGT+GYEEAA QGL+AGIN+A K + R+D+YIGVMIDDL +KG LE Sbjct: 368 LFTAGQTNGTSGYEEAAGQGLIAGINAALKVQGKPELILKRSDAYIGVMIDDLVTKGTLE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFA-KYIQEYNFLRSL--LK 479 PYR+ TSRAEYR+ LR DNAD RLT IG +G + + R K F K Q N L+ L +K Sbjct: 428 PYRLLTSRAEYRLILRHDNADMRLTEIGRDIGLVDDERWKAFEIKKNQFDNELKRLNSIK 487 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQI 538 + N + FK TA EF+ P+ S + P A + +IE L+ Sbjct: 488 LKPIKETNDRVQDLGFKPLTDAMTAKEFMRRPEIDYATAVSFVGPAAEDLDAKIIELLET 547 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E Y Y + + + ++K E++ IP + D+ ++ +++ E ++K + P + QAS+I Sbjct: 548 EIKYEGYIRKALDQVAKMKRMEEKRIPTNIDWDAIDSIATEARQKFKKINPETIGQASRI 607 Query: 599 EGMTPAALNLLLIYIKKN 616 G+ PA +++L+IY++ N Sbjct: 608 SGVNPADISILMIYLEGN 625 >gi|315640366|ref|ZP_07895481.1| glucose inhibited division protein A [Enterococcus italicus DSM 15952] gi|315483871|gb|EFU74352.1| glucose inhibited division protein A [Enterococcus italicus DSM 15952] Length = 634 Score = 499 bits (1284), Expect = e-139, Method: Compositional matrix adjust. Identities = 267/621 (42%), Positives = 379/621 (61%), Gaps = 9/621 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 S+DVIV+G GHAG EAA A+++G T L+T +G M CNP++GG KG +VREIDA Sbjct: 8 SFDVIVVGAGHAGSEAALAASRMGNKTLLLTINLDMVGFMPCNPSVGGPAKGVVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y M+ I + NL + QG V Sbjct: 68 LGGEMGRNIDKTYIQMRMLNTGKGPAVRALRAQADKHAYSAEMKHTIEQEPNLTLRQGLV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ ++ + VV+T GT LRG I IG+LK +G PS L + Sbjct: 128 ERLIVEDHVCKGVITATGARYAAKAVVITAGTALRGEIIIGELKYSSGPNNSQPSVGLAD 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR--QIECGI 242 + + R KTGTP R+ G TI + TE Q D+ FSF T + Q C + Sbjct: 188 HLKELGLEIARFKTGTPPRVKGSTIDYSVTEIQPGDDEPNHFSFGTPDSAYKLEQEPCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II +N+ + +++G ++ G RYCPSIEDKIVRF ++ HQ+FLEPEGL+T Sbjct: 248 TYTNEKTHEIIHKNLHRAPMFTGIVEGVGARYCPSIEDKIVRFSDKPRHQLFLEPEGLHT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q +R+I GLE+V ++R GYAIEYD + P +L PTLETK I+ Sbjct: 308 EEVYVQGLSTSLPEDVQVAMLRSIAGLEEVEMMRTGYAIEYDVVVPHQLRPTLETKPIAN 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQ NGT+GYEEAA QG++AGIN+ K + + R+D YIGVMIDDL +KG E Sbjct: 368 LFTAGQTNGTSGYEEAAGQGIIAGINAGLKVQGKEPLIVKRSDGYIGVMIDDLVTKGTNE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF---AKYIQ-EYNFLRS-L 477 PYR+ TSRAEYR+ LR DNAD RLT +G ++G + E + + F K+++ E LR+ Sbjct: 428 PYRLLTSRAEYRLLLRHDNADLRLTEMGHQIGLVKEEQYQAFLDKKKHVEAELKRLRNER 487 Query: 478 LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 LK L + +DG A + L P+ Q++ PD + IE+++ Sbjct: 488 LKPTQEVQAMLIQRGSAELKDGI--LAADLLKRPELMYQDIVQFLPDTPSLTKKEIEQVE 545 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ Y Y + + + +++K E + IP+ DYS++ L+ E K+KL ++P L QAS+ Sbjct: 546 IQLKYEGYINKALEKVEKLKRMEAKRIPEKIDYSAINGLATEAKQKLQKIQPETLAQASR 605 Query: 598 IEGMTPAALNLLLIYIKKNTV 618 I G+ PA +++L++YI++ + Sbjct: 606 ISGVNPADMSILMVYIEQGKI 626 >gi|282848772|ref|ZP_06258167.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Veillonella parvula ATCC 17745] gi|282581558|gb|EFB86946.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Veillonella parvula ATCC 17745] Length = 623 Score = 499 bits (1284), Expect = e-139, Method: Compositional matrix adjust. Identities = 264/620 (42%), Positives = 383/620 (61%), Gaps = 16/620 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIGGGHAGCEAA A++G T + T I M CNPA+GG GK HLV E+DA Sbjct: 6 NYDVIVIGGGHAGCEAALATARMGHRTLMATISLDNIALMPCNPAVGGPGKSHLVYEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG ADA IQ R+LN+ KGPAV R Q+D+ Y+ M++ + + +NL+V Q V Sbjct: 66 LGGQMGINADATAIQMRMLNMGKGPAVHSLRCQSDKIKYQHLMKQTLENTDNLNVKQIMV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ IV + V+L TGT+L+G I IG + G G + Sbjct: 126 TELKVEDGKVTGIVTELGEFYGAKAVILCTGTYLKGKILIGDIDYVGGPNGQRVAEHFSQ 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S + + R KTGTPAR+D +T+ D Q D FSFM + I + C +T Sbjct: 186 SLLDNGVELMRFKTGTPARVDKRTLNLDNMVVQEGDAHHHAFSFMDEWINRNEDVCWLTY 245 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN ETH II NI + +YSG I+ GPRYCPSIEDK+VRF ++ HQ+F+EPEG T+ Sbjct: 246 TNKETHEIIHSNIHRAPMYSGKIEGVGPRYCPSIEDKVVRFADKERHQLFVEPEGTGTNE 305 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+ST+LP ++Q+ F+RTIPGLE V I+RP YAIEYD +NP +L P L+ K I GL+ Sbjct: 306 MYVQGMSTSLPMDVQYAFLRTIPGLENVEIMRPAYAIEYDCLNPTQLTPALQVKHIEGLY 365 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ NGT+GYEEAAAQGL+AGIN+A + +R+++YIGV+IDDL +KG EPY Sbjct: 366 SAGQANGTSGYEEAAAQGLMAGINAALWLEGKEPFILARSEAYIGVLIDDLVTKGTNEPY 425 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSR+EYR+ LR DNAD RLT G +G + + R+AK+ + + + L T Sbjct: 426 RMMTSRSEYRLLLRQDNADMRLTEKGRTIGLV---KDDRWAKFTAKKAAIEEAMDMLRNT 482 Query: 485 SKNLSSTSISFKQDGKT---RT---AYEFLSYPDFSIQNLFSICPDA---RKFSSLVIER 535 N S + + + T RT AY+ + + S +++ DA ++++ V E Sbjct: 483 PVNPSKETQALLESLGTAPIRTGIHAYDLVKRNELS----YAVVADAFGLKRYTPDVEEA 538 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 + I +Y Y +QM + +++ E++++PK++DY+ + +S E ++KL+ ++P ++ QA Sbjct: 539 VDISITYEGYIKKQMEQVDKVRKLEEKILPKEWDYTQIKGISLEAQQKLNKIRPHSIGQA 598 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G++PA +++LLI +++ Sbjct: 599 SRISGVSPADVSVLLIQLEQ 618 >gi|76798866|ref|ZP_00781075.1| glucose-inhibited division protein A [Streptococcus agalactiae 18RS21] gi|76585789|gb|EAO62338.1| glucose-inhibited division protein A [Streptococcus agalactiae 18RS21] Length = 633 Score = 499 bits (1284), Expect = e-139, Method: Compositional matrix adjust. Identities = 272/620 (43%), Positives = 381/620 (61%), Gaps = 14/620 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YD+IV+G GH+G EA+ A+++G T L T + M CNP+IGG KG +VREIDA Sbjct: 8 NYDIIVVGAGHSGVEASLAASRMGCKTLLATINLEMLAFMPCNPSIGGSAKGIVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ ++LN KGPAVR R QAD+ LY M++ + QENL + Q + Sbjct: 68 LGGEMGKNIDKTYIQMKMLNTGKGPAVRALRAQADKALYAQTMKQTVEKQENLTLRQAMI 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + N +VV+TTGT LRG I +G LK +G S +L + Sbjct: 128 DEILVEDGKVVGVRTATNQKFSAKSVVITTGTALRGEIILGDLKYSSGPNNSLASVTLAD 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT---DKITNRQIECG 241 + + GR KTGTP R+ +I ++KTE Q DE+ FSFM+ D IT+ Q+ C Sbjct: 188 NLRDLGLEIGRFKTGTPPRVKASSINYEKTEIQPGDEQPNHFSFMSRDEDYITD-QVPCW 246 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN +H II +N+ + ++SG +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG Sbjct: 247 LTYTNTLSHDIINQNLHRAPMFSGIVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRY 306 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ VY G+ST+LPE++Q +R+I GLE ++R GYAIEYD + P +L TLETK I+ Sbjct: 307 TEEVYVQGLSTSLPEDVQVDLLRSIKGLENAEMMRTGYAIEYDIVLPHQLRATLETKVIA 366 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQ NGT+GYEEAA QGLVAGIN+A K + R+D+YIGVMIDDL +KG L Sbjct: 367 GLFTAGQTNGTSGYEEAAGQGLVAGINAALKVQGKPELILKRSDAYIGVMIDDLVTKGTL 426 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR----QKRFAKYIQEYNFLRSL 477 EPYR+ TSRAEYR+ LR DNAD RLT IG ++G + E R +KR ++ E L S+ Sbjct: 427 EPYRLLTSRAEYRLILRHDNADMRLTEIGYEIGLVDEERYAIFKKRQMQFENELERLDSI 486 Query: 478 -LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPD--FSIQNLFSICPDARKFSSLVIE 534 LK + T+K + + FK TA EF+ P +++ F C D S VIE Sbjct: 487 KLKPVSETNKRIQ--ELGFKPLTDALTAKEFMRRPQITYAVATDFVGCAD-EPLDSKVIE 543 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 L+ E Y Y + + + ++K E++ IP D+ + +++ E ++K + P L Q Sbjct: 544 LLETEIKYEGYIKKALDQVAKMKRMEEKRIPPHIDWDDIDSIATEARQKFKKINPETLGQ 603 Query: 595 ASKIEGMTPAALNLLLIYIK 614 AS+I G+ PA +++L++Y++ Sbjct: 604 ASRISGVNPADISILMVYLE 623 >gi|225575643|ref|ZP_03784253.1| hypothetical protein RUMHYD_03736 [Blautia hydrogenotrophica DSM 10507] gi|225037153|gb|EEG47399.1| hypothetical protein RUMHYD_03736 [Blautia hydrogenotrophica DSM 10507] Length = 646 Score = 499 bits (1284), Expect = e-139, Method: Compositional matrix adjust. Identities = 263/621 (42%), Positives = 379/621 (61%), Gaps = 9/621 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + SYD++V+G GHAGCEAA A+LG ST + T +I M CNP IGG KGHLVRE Sbjct: 20 LTESYDIVVVGAGHAGCEAALAGARLGFSTVMFTVSVDSIAMMPCNPNIGGSSKGHLVRE 79 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DAL G MG+ D +Q ++LN KGPAV R QAD++ Y M++ + + NL + Q Sbjct: 80 VDALGGEMGKNIDKTFLQSKMLNRSKGPAVHSLRAQADKQRYSNEMRKTLENTPNLTIKQ 139 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 GEV + I+ + ++ C V+L TGT+L+ G + G G +N Sbjct: 140 GEVTKLLVKDGKITGVETYSGAVYDCKAVILCTGTYLKARCIYGNVSSDTGPNGLQAANH 199 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KITNRQIE 239 L +S + R KTGTPAR+ G +I + K E+QF DE+++PFSF TD + QI Sbjct: 200 LTDSLRELGIRMYRFKTGTPARIAGNSIDYSKMEEQFGDEKIVPFSFSTDPESVQIPQIS 259 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +T TN TH II EN+ S ++SG I+ GPRYCPSIEDK+VRF ++N HQ+F+EPEG Sbjct: 260 CWLTYTNERTHEIIRENLDRSPLFSGMIEGTGPRYCPSIEDKVVRFADKNRHQVFIEPEG 319 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T+ +Y G+S++LPE++Q+Q R++ GLE I++ YAIEYD I+ ++L TLE K Sbjct: 320 LYTNEMYIGGMSSSLPEDVQYQMYRSVAGLENARIVKSAYAIEYDCIDARQLNATLEFKN 379 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQ NG++GYEEAAAQGLVAGIN+A K D + R+++YIGV+IDDL +K Sbjct: 380 IKGLFSAGQFNGSSGYEEAAAQGLVAGINAALKIQGRDFMVLDRSEAYIGVLIDDLVTKE 439 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL-- 477 EPYRM TSRAEYR+ LR DNAD RL G ++G I E +R + +E R + Sbjct: 440 NHEPYRMMTSRAEYRLLLRQDNADLRLRKKGYEVGLIDEEVYQRTLE--KERLIEREIKR 497 Query: 478 LKSLVLTSKNLSSTSISFKQDGKTR---TAYEFLSYPDFSIQNLFSICPDARKFSSLVIE 534 ++ + L + + Q + T E + P+ + + L I P+ + V E Sbjct: 498 IEHVTLGASEAVQNVLERYQSTALKSGTTLAELIRRPELNYEILAEIDPERPQLPWDVKE 557 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 ++ I Y Y RQ + ++ K E++ IP++ DY + L E K+KL + +P ++ Q Sbjct: 558 QVNINIKYDGYIRRQKKQVEQFKKLEEKKIPENIDYDEISGLRIEAKQKLKLYRPMSIGQ 617 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G++PA +++LL+Y+ + Sbjct: 618 ASRIAGVSPADVSVLLVYMPR 638 >gi|86610246|ref|YP_479008.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Synechococcus sp. JA-2-3B'a(2-13)] gi|123500771|sp|Q2JI26|MNMG_SYNJB RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|86558788|gb|ABD03745.1| glucose-inhibited division protein A [Synechococcus sp. JA-2-3B'a(2-13)] Length = 643 Score = 499 bits (1284), Expect = e-139, Method: Compositional matrix adjust. Identities = 272/618 (44%), Positives = 377/618 (61%), Gaps = 13/618 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+V+GGGH+GCEAA AA+LG +T ++T I CNPA+GG K LV EIDAL Sbjct: 15 YDVVVVGGGHSGCEAALAAARLGCNTLMLTLNLDKIAWQPCNPAVGGPAKSQLVHEIDAL 74 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+V D +Q RVLN +GPAV R Q D+ Y M+ + +Q NL + +G V Sbjct: 75 GGEMGKVTDRTYLQKRVLNRSRGPAVWALRAQTDKREYARVMRSVVENQPNLTIREGTVT 134 Query: 126 GFNTEKNI-ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 +N + +V ++ C V+LTTGTFL G I IG+ AGR G+ L + Sbjct: 135 DLVLGRNDEVVGVVTHFGTIFGCRAVILTTGTFLGGRIWIGRHWQAAGRAGEFAVEGLTD 194 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGIT 243 + + F+TGRLKTGTPAR+D +++ + E+Q D + FSF + R Q++C +T Sbjct: 195 TLRQLGFETGRLKTGTPARVDRRSVDFSVMERQPGDPDVRWFSFDPEVWVPREQMDCYLT 254 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 RT ETHRII EN+ + +Y G +++ GPRYCPSIEDKIVRF ++ HQIF+EPEG + Sbjct: 255 RTTPETHRIIRENLHETPVYGGWVEAKGPRYCPSIEDKIVRFADKESHQIFIEPEGRDLP 314 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G ST +PE+IQ Q +R++PGLE+ ++RP YA+EYDY+ +L+PTL TKK+ GL Sbjct: 315 ELYIQGFSTGMPEKIQIQMLRSLPGLERCVMLRPAYAVEYDYLPATQLYPTLMTKKVQGL 374 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AGIN+AR + R SYIG +IDDL +K + EP Sbjct: 375 FCAGQINGTTGYEEAAAQGLIAGINAARLVQGKPLVTLPRESSYIGTLIDDLCTKELREP 434 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR-------QKRFAKYIQEYNFLRS 476 YRM TSR+EYR+ LR DNAD RLTP+G + G I +RR Q R A I+ R Sbjct: 435 YRMLTSRSEYRLILRSDNADQRLTPLGREWGLIDDRRWALFQAKQARIAAEIERLETQR- 493 Query: 477 LLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 +K+ L LS ++ + + T E L +L + + E Sbjct: 494 -VKAHDLAGIQLS--QLTGQGIKGSATLAEILRRNQIHYSDLLELGLGDAELDPFEQEAA 550 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I Y+ Y RQ + +++ + R +P D DY S+P LS E ++KLS ++P + QA+ Sbjct: 551 EIAVKYSGYIQRQQSQIEQVSKQYHRPLPPDLDYHSIPTLSKESRDKLSAVRPLTVGQAA 610 Query: 597 KIEGMTPAALNLLLIYIK 614 +I G+ PA +N LLIY++ Sbjct: 611 RIGGVNPADINALLIYLE 628 >gi|326793315|ref|YP_004311136.1| glucose inhibited division protein A [Clostridium lentocellum DSM 5427] gi|326544079|gb|ADZ85938.1| glucose inhibited division protein A [Clostridium lentocellum DSM 5427] Length = 636 Score = 499 bits (1284), Expect = e-139, Method: Compositional matrix adjust. Identities = 272/614 (44%), Positives = 375/614 (61%), Gaps = 5/614 (0%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALD 66 D++VIGGGHAGCEAA AA++G T + T +I M CNP +GG KGHLVREIDAL Sbjct: 8 DIVVIGGGHAGCEAALAAARMGKKTIMFTMSLDSIAMMPCNPNVGGTSKGHLVREIDALG 67 Query: 67 GLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAG 126 G MG+ D IQ R+LN KGPAV R QAD+ Y AM++ + + E L + Q EV Sbjct: 68 GEMGKNIDRTYIQSRMLNTAKGPAVHSLRAQADKTKYSHAMKKVLENVEKLIIKQQEVVE 127 Query: 127 FNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSF 186 E + +V ++ C +VL GT++R G+ G G SN L + Sbjct: 128 VQVEDGKVKGVVTNTGAIYECKAIVLAGGTYVRSRCLTGECIEYTGPNGLKTSNKLSEAL 187 Query: 187 MKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK--ITNRQIECGITR 244 + + R KTGTPAR+D +T+ + K E Q DER++PFSF + I Q C +T Sbjct: 188 KELGIELRRFKTGTPARVDARTVDFSKMEPQHGDERIVPFSFENKEKDIKRDQYPCYLTY 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH+II +N+ S +YSG I+ GPRYCPSIEDK+VRF ++ HQ+F+EPEG +T Sbjct: 248 TNEKTHQIIRDNLHRSPMYSGVIEGTGPRYCPSIEDKVVRFADKERHQVFIEPEGEDTTE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+S++LPEE+Q +RT+ GLE V ++R GYAIEYD INP +L +LE K I G F Sbjct: 308 MYVQGMSSSLPEEVQIAMLRTLKGLENVEVMRIGYAIEYDCINPMQLKHSLELKAIEGFF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ+NG++GYEEAAAQGLVAGIN+A K + D + R++ YIGV+IDDL +KG EPY Sbjct: 368 SAGQMNGSSGYEEAAAQGLVAGINAALKVDGRDPMIIDRSEGYIGVLIDDLVTKGTKEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSRAEYR+ LR DNAD RLT G + G I R +RFA + LK + + Sbjct: 428 RMMTSRAEYRLLLRQDNADLRLTQKGYEAGLISAGRYERFAAKKSAIDAELERLKHVYVG 487 Query: 485 SKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 + + K R+ E L P+ ++ + D S VIE++ IE Sbjct: 488 TSEKVQAILEKKGSTPLRSGIALAEILKRPELEYEDFTEVDTDRPDLSLDVIEQVMIELR 547 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y RQM + ++ K EKRLIP D +Y + +L E K+KL ++P ++ QAS+I G+ Sbjct: 548 YEGYITRQMRQVEQFKKLEKRLIPADINYDDVYSLRLEAKQKLEQVRPISIGQASRISGV 607 Query: 602 TPAALNLLLIYIKK 615 +PA +++LL+Y+++ Sbjct: 608 SPADISMLLVYLEQ 621 >gi|309799044|ref|ZP_07693297.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus infantis SK1302] gi|308117279|gb|EFO54702.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus infantis SK1302] Length = 638 Score = 499 bits (1284), Expect = e-139, Method: Compositional matrix adjust. Identities = 259/615 (42%), Positives = 374/615 (60%), Gaps = 6/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DAL Sbjct: 9 YDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + D IQ ++LN KGPAVR R QAD+ELY M++ + +QENL + Q + Sbjct: 69 GGEMAKTIDKTYIQMKMLNTGKGPAVRALRAQADKELYSKEMRKTVENQENLTLRQTMID 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + V++TTGT LRG I IG LK +G S +L ++ Sbjct: 129 EILVEDGKVVGVRTATHQEYAAKAVIVTTGTALRGEIIIGDLKYSSGPNHSLASINLADN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 + + GR KTGTP R+ +I +D TE Q DE FS+ + + Q+ C +T Sbjct: 189 LKELGLEIGRFKTGTPPRVKASSINYDVTEIQPGDEAPNHFSYTSRDEDYVKDQVPCWLT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +H II N+ + +++G +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG NT+ Sbjct: 249 YTNGISHEIIQNNLHRAPMFTGVVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRNTE 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE++Q + + +I GLE ++R GYAIEYD + P +L TLETKKISGL Sbjct: 309 EVYVQGLSTSLPEDVQRELVHSIKGLENAEMMRTGYAIEYDMVLPHQLRATLETKKISGL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMIDDL +KG +EP Sbjct: 369 FTAGQTNGTSGYEEAAGQGIIAGINAALKIQGKPELILKRSDGYIGVMIDDLVTKGTIEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G ++G + + R RF +++ L S+ L Sbjct: 429 YRLLTSRAEYRLILRHDNADMRLTEMGREIGLVDDERWARFEIKKNQFDNEMKRLDSIKL 488 Query: 484 ---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQIE 539 N ++ FK TA EFL P+ S Q++ + I P A + +IE ++ E Sbjct: 489 KPVKETNAKVEAMGFKPLTDAVTAKEFLRRPEVSYQDVVAFIGPAAEELDDKIIELIETE 548 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + M + ++K E++ IP + D+ + +++ E ++K ++ P + QAS+I Sbjct: 549 IKYEGYISKAMDQVAKMKRMEEKRIPANIDWDDIDSIATEARQKFKLINPETIGQASRIS 608 Query: 600 GMTPAALNLLLIYIK 614 G+ PA +++L++Y++ Sbjct: 609 GVNPADISILMVYLE 623 >gi|332687268|ref|YP_004457042.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Melissococcus plutonius ATCC 35311] gi|332371277|dbj|BAK22233.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Melissococcus plutonius ATCC 35311] Length = 632 Score = 499 bits (1284), Expect = e-139, Method: Compositional matrix adjust. Identities = 266/623 (42%), Positives = 385/623 (61%), Gaps = 12/623 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAG EAA AA++G T L+T + M CNP++GG KG +VREIDA Sbjct: 8 TYDVIVVGAGHAGSEAALSAARMGCKTLLLTINLDMVAFMPCNPSVGGPAKGVVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD++ Y M++ I ++NL + QG V Sbjct: 68 LGGEMGRNIDKTSIQMRMLNTGKGPAVRALRAQADKQEYATEMKKTIEKEKNLTLRQGIV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E I ++ ++ + V++T GT LRG I IG+LK +G PS L N Sbjct: 128 EQLVVEDGICKGVITSTGAIYQSQAVIITAGTSLRGEIIIGELKYSSGPNNSQPSVGLAN 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGI 242 + F+ R KTGTP R+ TI ++ TE+Q D+ + FS+ T + + Q C + Sbjct: 188 HLKELGFEIARFKTGTPPRVKSSTIDYNATEEQAGDKAINYFSYRTKEEAYSKEQRSCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II +N+ + +++G ++ G RYCPSIEDKIVRF +++ HQ+FLEPEGLNT Sbjct: 248 TYTNEMTHEIIRKNLHRAPMFTGIVEGVGARYCPSIEDKIVRFEDKSRHQLFLEPEGLNT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q + +I GLEK ++R GYAIEYD + P +L PTLETK I+ Sbjct: 308 EEVYVQGLSTSLPEDVQTNVLHSIDGLEKAEMMRTGYAIEYDVVVPHQLRPTLETKIINN 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQ NGT+GYEEAA QGL+AGIN+A K R+D YIGVMIDDL +KG E Sbjct: 368 LYTAGQTNGTSGYEEAAGQGLMAGINAALKIKGKAPFIMKRSDGYIGVMIDDLVTKGTNE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF----AKYIQEYNFLRSL- 477 PYR+ TSRAEYR+ LR DNAD RLT G +G + E + + + A +E FL++ Sbjct: 428 PYRLLTSRAEYRLLLRHDNADLRLTEKGYAMGLVKEEQYQEYLIKKATIEKEIAFLQTTR 487 Query: 478 LKSLVLTSKNLSST-SISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA-RKFSSLVIER 535 +K + L+ S+ K + A +FL P+ + +L P++ + + VIE+ Sbjct: 488 IKPTDDVQQFLTEKGSVPLKD---SLLASDFLKRPEINFHDLQQFIPNSDQTLNDKVIEQ 544 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y + + + ++K E + IP++ DY ++ L+ E K+KL ++P + QA Sbjct: 545 VEIQIKYEGYIKKAVEKVDKLKRMEAKRIPENIDYYAINGLATEAKQKLQKIQPETMAQA 604 Query: 596 SKIEGMTPAALNLLLIYIKKNTV 618 S+I G+ PA L++L++YI++ + Sbjct: 605 SRISGVNPADLSILMVYIEQGKI 627 >gi|257875885|ref|ZP_05655538.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Enterococcus casseliflavus EC20] gi|257810051|gb|EEV38871.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Enterococcus casseliflavus EC20] Length = 630 Score = 498 bits (1283), Expect = e-139, Method: Compositional matrix adjust. Identities = 265/624 (42%), Positives = 380/624 (60%), Gaps = 15/624 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+G GHAG EAA A+++GA T L+T + M CNP++GG KG +VREIDA Sbjct: 8 SYDVIVVGAGHAGSEAALAASRMGAKTLLLTINLDMVAFMPCNPSVGGPAKGVVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ R+LN KGPAVR R QAD+ Y M+R I + NL + QG V Sbjct: 68 LGGEMGKNIDKTYIQMRMLNTGKGPAVRALRAQADKHAYAAEMKRTIEKEANLTLRQGIV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E+ +V + + VV+T GT LRG I IG+LK +G PS L + Sbjct: 128 EKLIVEEGECRGVVTSTGARYQAQAVVITAGTALRGEIIIGELKYSSGPNNSQPSIGLAD 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNRQIE-CGI 242 + + R KTGTP R+ TI ++ TE Q DE+ FS+ T D+ N+ E C + Sbjct: 188 HLKELGLEIARFKTGTPPRVKSSTINYEVTEIQPGDEQPNHFSYSTPDEAYNQNQEPCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH+II +N+ + +++G ++ G RYCPSIEDKIVRF +++ HQ+FLEPEGLNT Sbjct: 248 TYTNEGTHQIINQNLHRAPMFTGIVEGVGARYCPSIEDKIVRFADKSRHQLFLEPEGLNT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST++PE++Q Q + +I GLEK ++R GYAIEYD + P +L PTLETK I Sbjct: 308 EEVYVQGLSTSMPEDVQVQMLHSIAGLEKAEMMRTGYAIEYDVVVPHQLRPTLETKVIEN 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQ NGT+GYEEAA QGL+AGIN+A K + R+D YIGVMIDDL +KG E Sbjct: 368 LFTAGQTNGTSGYEEAAGQGLIAGINAALKIQGKEPFIMKRSDGYIGVMIDDLVTKGTNE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYR+ TSRAEYR+ LR DNAD RLT +G ++G + E ++ Y+ + + + +K L Sbjct: 428 PYRLLTSRAEYRLLLRHDNADLRLTEVGHQIGLVPE---AQYEAYVAKKEAVEAEIKRLS 484 Query: 483 L--------TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIE 534 L++ + +DG A EFL P+ + + IE Sbjct: 485 KIRIKPTPEVQAYLTAKGTATLKDGV--LANEFLRRPEVTYAEMLQFIEANEALKPKEIE 542 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y + + + +++K E + IP++ DY+++ L+ E K+KL ++P + Q Sbjct: 543 QVEIQIKYEGYIKKALEKVEKLKRMEAKRIPENIDYAAINGLATEAKQKLQKIQPETIAQ 602 Query: 595 ASKIEGMTPAALNLLLIYIKKNTV 618 AS+I G+ PA +++L++YI++ + Sbjct: 603 ASRISGVNPADISILMVYIEQGKI 626 >gi|251783536|ref|YP_002997841.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242392168|dbj|BAH82627.1| putative tRNA(5-carboxymethylaminomethyl-2-thiouridylate) synthase subunit [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 632 Score = 498 bits (1283), Expect = e-139, Method: Compositional matrix adjust. Identities = 268/618 (43%), Positives = 374/618 (60%), Gaps = 6/618 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAG EA+ +++G T L T + M CNP+IGG KG +VREIDA Sbjct: 8 SYDVIVIGAGHAGVEASLATSRMGCKTLLATINLDMLAFMPCNPSIGGSAKGIVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ ++LN KGPAVR R QAD+ LY M+ + Q NL + Q + Sbjct: 68 LGGEMGKNIDKTYIQMKMLNTGKGPAVRALRAQADKSLYAREMKHTVEKQANLTLRQTMI 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ TVV+TTGT LRG I +G+LK +G S +L + Sbjct: 128 DDILVEDGRVVGVLTATGQKFAAKTVVVTTGTALRGEIILGELKYSSGPNNSLASVTLAD 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--NRQIECGI 242 + K + GR KTGTP R+ +I +D+TE Q D++ FSFM+ QI C + Sbjct: 188 NLKKLGLEIGRFKTGTPPRVKASSIDYDQTEIQPGDDKPNHFSFMSKDADYLKDQIPCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +H II +N+ + ++SG +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG +T Sbjct: 248 TYTNQTSHDIINQNLYRAPMFSGIVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRDT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q + I +I GLEK ++R GYAIEYD + P +L TLETK ISG Sbjct: 308 EEVYVQGLSTSLPEDVQKELIHSIKGLEKAEMMRTGYAIEYDIVLPHQLRATLETKLISG 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQ NGT+GYEEAA QG++AGIN+A K + R+D+YIGVMIDDL +KG LE Sbjct: 368 LFTAGQTNGTSGYEEAAGQGIIAGINAALKVQGKPELILKRSDAYIGVMIDDLVTKGTLE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFA-KYIQEYNFLRSL--LK 479 PYR+ TSRAEYR+ LR DNAD RLT IG +G + + R F K Q N L+ L +K Sbjct: 428 PYRLLTSRAEYRLILRHDNADMRLTEIGRDIGLVDDDRWNAFEIKKNQFDNELKRLDSIK 487 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQI 538 + N + FK TA EF+ P+ S + P A + +IE L+ Sbjct: 488 LKPIKETNDRVQDLGFKPLTDAMTAKEFMRRPEIDYATAVSFVGPAAEDLDAKIIELLET 547 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E Y Y + + + ++K E++ IP + D+ ++ +++ E ++K + P + QAS+I Sbjct: 548 EIKYEGYIRKALDQVAKMKRMEEKRIPANIDWDAIDSIATEARQKFKKINPETIGQASRI 607 Query: 599 EGMTPAALNLLLIYIKKN 616 G+ PA +++L++Y++ N Sbjct: 608 SGVNPADISILMVYLEGN 625 >gi|229368699|gb|ACQ62984.1| mitochondrial translation optimization 1 homolog isoform b (predicted) [Dasypus novemcinctus] Length = 675 Score = 498 bits (1283), Expect = e-139, Method: Compositional matrix adjust. Identities = 286/632 (45%), Positives = 407/632 (64%), Gaps = 29/632 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAAA AA+ G+ T L+TH+ TIG MSCNP+ GG+GKGHL+RE+DAL Sbjct: 34 FDVIVIGGGHAGTEAAAAAARCGSRTLLLTHRVDTIGQMSCNPSFGGIGKGHLMREVDAL 93 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGL R+ D +GI ++VLN +KGPAV G R Q DR+LY+ MQ+EILS L V +G V Sbjct: 94 DGLCSRICDQSGIHYKVLNRRKGPAVWGLRAQIDRKLYKYNMQKEILSTPLLTVQEGAVE 153 Query: 126 GF--------NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 + K +S +V+ D S I +V+LTTGTFLRG++ IG PAGR+GD Sbjct: 154 DLILTEPEPEHPGKCRVSGVVLMDGSTIYAGSVILTTGTFLRGMVIIGLEMHPAGRLGDQ 213 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR- 236 PS L + K F GRLKTGTP R+ ++I + KQ D +PFSF+ + + + Sbjct: 214 PSIGLAQTLEKLGFVVGRLKTGTPPRIAKESINFSILCKQTPDNPSVPFSFINEAVWIKP 273 Query: 237 --QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 Q+ C +T TN +I++EN+ ++ + GPRYCPSIE K++RF R HQ++ Sbjct: 274 EDQLPCYLTHTNPTVDKIVLENLHLNSHVKETTR--GPRYCPSIESKVLRFPNRV-HQVW 330 Query: 295 LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT 354 LEPEG+++D++YP G+S LP E+Q + I +I GLEK +I PGY ++YDY++P+++ P Sbjct: 331 LEPEGIDSDLIYPQGLSVTLPAELQEKMITSIRGLEKAKLIHPGYGVQYDYVDPRQISPF 390 Query: 355 LETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDD 414 LET + LF AGQINGTTGYEEAAAQG++AGIN++ + ++ SRT+ YIGV+IDD Sbjct: 391 LETHLVQRLFFAGQINGTTGYEEAAAQGVIAGINASLRVSRKPPFVISRTEGYIGVLIDD 450 Query: 415 LTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMK-LGCIGERRQKRFAKYIQEYNF 473 LT+ G EPYRMFTSR E+R+SLRPDNAD RLT K GC+ ++R +R + Sbjct: 451 LTTLGTSEPYRMFTSRVEFRLSLRPDNADCRLTHRAYKDAGCVSQQRYERASWMKSSLEE 510 Query: 474 LRSLLKSLVLTS----KNLSSTSISFKQDGKT--RTAYEFLSYPDFSIQNLFSICPDA-R 526 S+LKS+ S K + SIS GK+ +A + L Y + ++ L P+ + Sbjct: 511 GISVLKSIEFMSSKWKKLIPEASISM---GKSLPLSALDVLKYEEVDMELLAKAVPEPLK 567 Query: 527 KFSSL--VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLP--ALSNELKE 582 K++ + ERL+IE++Y Q E ++++ +E +P++ DY +L +LS+E +E Sbjct: 568 KYTECRELAERLKIEATYELALFHQQQEIEDVQRDEALRLPENLDYLTLKDVSLSHEARE 627 Query: 583 KLSILKPFNLLQASKIEGMTPAALNLLLIYIK 614 KL +P + AS+I G+TPAA+ LL ++K Sbjct: 628 KLHFSRPQTIGAASRIPGVTPAAIVNLLRFVK 659 >gi|312890488|ref|ZP_07750024.1| glucose inhibited division protein A [Mucilaginibacter paludis DSM 18603] gi|311296946|gb|EFQ74079.1| glucose inhibited division protein A [Mucilaginibacter paludis DSM 18603] Length = 620 Score = 498 bits (1283), Expect = e-139, Method: Compositional matrix adjust. Identities = 283/630 (44%), Positives = 392/630 (62%), Gaps = 30/630 (4%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + Y+VIV+G GHAGCEAAA AA LG+S LIT TI MSCNPA+GG+ KG +VREID Sbjct: 3 KKYNVIVVGAGHAGCEAAAAAANLGSSVLLITMNMGTIAQMSCNPAMGGVAKGQIVREID 62 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADR----ELYRLAMQREILSQENLDV 119 AL G G ++D IQFR+LN+ KGPA+ PRTQ DR E +RLA++R N+D Sbjct: 63 ALGGYSGIISDKTSIQFRMLNLSKGPAMWSPRTQNDRMRFAEEWRLALER----TPNVDF 118 Query: 120 IQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 Q V + N +S + I VVLT GTFL GVIHIG+ K GR G+ + Sbjct: 119 WQDTVTSLLIKGNTVSGVKTSLGVEIESDAVVLTNGTFLNGVIHIGEKKFGGGRTGEKAA 178 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIE 239 L + F+ GR+KTGTP R+DG+++ + E+Q+ DE+ FS+ K+ Q Sbjct: 179 TGLTEQLVTLGFEAGRMKTGTPPRVDGRSLNYTLMEEQWGDEKRGRFSYTDVKLMEEQRC 238 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN + H + E + S +++G IK GPRYCPSIEDKI RF ER+ HQIF+EPEG Sbjct: 239 CWITYTNNKVHETLKEGFEKSPMFTGRIKGLGPRYCPSIEDKINRFAERDRHQIFVEPEG 298 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 +T +Y NG ST+LPE++Q++ + IPG E V + RPGYAIEYDY P +L TLETK Sbjct: 299 AHTVEIYVNGFSTSLPEDVQYKALIQIPGFENVRMFRPGYAIEYDYFPPIQLGLTLETKL 358 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 IS LF AGQINGTTGYEEAA+QGL+AGIN+ +K + + R++SYIGV+IDDL +KG Sbjct: 359 ISNLFFAGQINGTTGYEEAASQGLIAGINAHQKVHDKHELIMKRSESYIGVLIDDLVTKG 418 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQE----YNFLR 475 EPYRMFTSRAE+R+ LR DNAD RL+PIG LG I + R + + I NF++ Sbjct: 419 TEEPYRMFTSRAEHRLLLRQDNADIRLSPIGFNLGLISQERLDKVNQKITNSDVIVNFVK 478 Query: 476 ----------SLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA 525 SLL+ L + N + +S G+ + + L D S+ +L + Sbjct: 479 NKSIDASDVNSLLEELGTSPLNQNVKMVSLI--GRPQVGFNDLRKVDQSLNDLLA----- 531 Query: 526 RKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 + + +E+ +I+ Y +Y ++M +K E + I +F+Y L +LS E +EKL Sbjct: 532 -NYDNETVEQAEIKIKYESYFEKEMDIVNRMKKMEDKEINPEFNYHQLVSLSKEAREKLM 590 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 +KP L QAS+I G++P+ +++L++++ + Sbjct: 591 RIKPRTLGQASRISGVSPSDISVLMVHVSR 620 >gi|67922566|ref|ZP_00516073.1| Glucose-inhibited division protein A subfamily [Crocosphaera watsonii WH 8501] gi|67855575|gb|EAM50827.1| Glucose-inhibited division protein A subfamily [Crocosphaera watsonii WH 8501] Length = 634 Score = 498 bits (1283), Expect = e-139, Method: Compositional matrix adjust. Identities = 263/617 (42%), Positives = 372/617 (60%), Gaps = 9/617 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 S+D+IV+G GH+GCEAA AA+LG T ++T I CNPA+GG K L E+DA Sbjct: 12 SFDIIVVGAGHSGCEAALAAARLGCCTMMLTLNLDRIAWQPCNPAVGGPAKSQLTHEVDA 71 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G +G++AD +Q RVLN +GPAV R Q D+ Y M+ + +Q+NL + +G V Sbjct: 72 LGGEIGKMADRTYLQKRVLNSSRGPAVWALRAQTDKREYSAVMKEIVENQKNLSIREGMV 131 Query: 125 AGFNTEKNI-ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 KN + I + + V+LTTGTFL G I IG + AGR G+ + L Sbjct: 132 TDLVLGKNDEVIGIQTYFGTCFQAKAVILTTGTFLGGRIWIGNKSMEAGRSGEFAAVGLT 191 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSF-MTDKITNRQIECGI 242 + F+TGRLKTGTPAR+D +++ + + E Q DE + FSF + Q+ C + Sbjct: 192 ETLNNLGFETGRLKTGTPARVDKRSVDYSRLEPQPPDEEVRWFSFDPAVWVQKEQMNCYL 251 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 TRT ++TH++I +N+ S IY G I S GPRYCPSIEDKIVRF ++ HQIF+EPEG Sbjct: 252 TRTTIKTHQLIKDNLHLSPIYGGFIDSKGPRYCPSIEDKIVRFADKESHQIFIEPEGREI 311 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +Y G ST LPE+IQ +RT+PGLE ++RP YA+EYD++ + +PTL TKKI G Sbjct: 312 PELYIQGFSTGLPEKIQLAMLRTLPGLEDCVMLRPAYAVEYDFLPATQCYPTLMTKKIEG 371 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQ+NGTTGYEEAAAQG+VAGIN+ + + I F R +SY+G +IDDL +K + E Sbjct: 372 LFSAGQVNGTTGYEEAAAQGIVAGINAVKFVKNEEMIIFPREESYLGTLIDDLCTKDLRE 431 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRM TSR+EYR+ LR DNAD R+TP+G ++G I +RR F + ++ N + + Sbjct: 432 PYRMLTSRSEYRLILRSDNADQRMTPLGREIGLIDDRRWNLFEE--KQANIVAEKERLYE 489 Query: 483 LTSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 K I D + + T + L P F ++L + ++ E + Sbjct: 490 TRIKERDEVGIKIVNDTQQKIKGSVTLADLLRRPKFHYEHLEQYGLGNTELKTVEKEGAE 549 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ Y+ Y RQ I+ ++I + +P D DY S+ LS E +EKL+ ++P L QAS+ Sbjct: 550 IDIKYSGYLKRQQIQIEQISRHSNKKLPSDIDYMSIDTLSMEAREKLTKVRPLTLGQASR 609 Query: 598 IEGMTPAALNLLLIYIK 614 I G+ PA +N LL+Y++ Sbjct: 610 IGGVNPADINALLVYLE 626 >gi|322375109|ref|ZP_08049623.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus sp. C300] gi|321280609|gb|EFX57648.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus sp. C300] Length = 637 Score = 498 bits (1283), Expect = e-139, Method: Compositional matrix adjust. Identities = 259/615 (42%), Positives = 371/615 (60%), Gaps = 6/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DAL Sbjct: 9 YDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + D IQ ++LN KGPAVR R QAD+ELY M++ + +QENL + Q + Sbjct: 69 GGEMAKTIDKTYIQMKMLNTGKGPAVRALRAQADKELYSKEMRKTVENQENLTLRQTMID 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + V++TTGT LRG I IG LK +G S +L ++ Sbjct: 129 EILVEDGKVVGVRTATHQEYAAKAVIVTTGTALRGEIIIGDLKYSSGPNHSLASINLADN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 + + GR KTGTP R+ +I +D TE Q DE FS+ + + Q+ C +T Sbjct: 189 LKELGLEIGRFKTGTPPRVKASSINYDVTEIQPGDEAPNHFSYTSRDEDYVKDQVPCWLT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +H II N+ + +++G +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG NT+ Sbjct: 249 YTNGTSHEIIQNNLHRAPMFTGVVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRNTE 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE++Q + + +I GLE ++R GYAIEYD + P +L TLETKKISGL Sbjct: 309 EVYVQGLSTSLPEDVQRELVHSIKGLENAEMMRTGYAIEYDMVLPHQLRATLETKKISGL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMIDDL +KG +EP Sbjct: 369 FTAGQTNGTSGYEEAAGQGIIAGINAALKIQGKHELILKRSDGYIGVMIDDLVTKGTIEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G ++G + + R RF +++ L S+ L Sbjct: 429 YRLLTSRAEYRLILRHDNADMRLTEMGREIGLVDDERWARFEIKKNQFDNEMQRLDSIKL 488 Query: 484 ---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQIE 539 N + FK TA EFL P+ S Q++ I P A +IE ++ E Sbjct: 489 KPVKETNAKVEEMGFKPLTDAVTAKEFLRRPEVSYQDVVVFIGPAAEDLDDKIIELIETE 548 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + M + ++K E++ IP + D+ + +++ E ++K ++ P + QAS+I Sbjct: 549 IKYEGYISKAMDQVAKMKRMEEKRIPANIDWDDIDSIATEARQKFKLINPETIGQASRIS 608 Query: 600 GMTPAALNLLLIYIK 614 G+ PA +++L++Y++ Sbjct: 609 GVNPADISILMVYLE 623 >gi|94995350|ref|YP_603448.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pyogenes MGAS10750] gi|166200622|sp|Q1J457|MNMG_STRPF RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|94548858|gb|ABF38904.1| Putative tRNA (5-carboxymethylaminomethyl-2-thiouridylate) synthase subunit GidA [Streptococcus pyogenes MGAS10750] Length = 632 Score = 498 bits (1283), Expect = e-139, Method: Compositional matrix adjust. Identities = 269/618 (43%), Positives = 374/618 (60%), Gaps = 6/618 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIG GHAG EA+ +++G T L T + M CNP+IGG KG +VREIDA Sbjct: 8 NYDVIVIGAGHAGVEASLATSRMGCKTLLATINLDMLAFMPCNPSIGGSAKGIVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ ++LN KGPAVR R QAD+ LY M+ + Q NL + Q + Sbjct: 68 LGGEMGKNIDKTYIQMKMLNTGKGPAVRALRAQADKSLYAREMKHTVEKQANLTLRQTMI 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ VV+TTGT LRG I +G+LK +G S +L + Sbjct: 128 DDILVEDGRVVGVLTATGQKFAAKAVVVTTGTALRGEIILGELKYSSGPNNSLASVTLAD 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--NRQIECGI 242 + K + GR KTGTP R+ +I +D+TE Q D++ FSFM+ QI C + Sbjct: 188 NLKKLGLEIGRFKTGTPPRVKASSINYDQTEIQPGDDKPNHFSFMSKDADYLKDQIPCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +H II +N+ + ++SG +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG +T Sbjct: 248 TYTNQTSHDIINQNLYRAPMFSGIVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRDT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q I +I GLEK ++R GYAIEYD + P +L TLETK ISG Sbjct: 308 EEVYVQGLSTSLPEDVQKDLIHSIKGLEKAEMMRTGYAIEYDIVLPHQLRATLETKLISG 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQ NGT+GYEEAA QGL+AGIN+A K + R+D+YIGVMIDDL +KG LE Sbjct: 368 LFTAGQTNGTSGYEEAAGQGLIAGINAALKVQGKPELILKRSDAYIGVMIDDLVTKGTLE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFA-KYIQEYNFLRSL--LK 479 PYR+ TSRAEYR+ LR DNAD RLT IG +G + + R K F K Q N L+ L +K Sbjct: 428 PYRLLTSRAEYRLILRHDNADMRLTEIGRDIGLVDDERWKAFEIKKNQFDNELKRLNSIK 487 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQI 538 + + N + FK TA EF+ P+ S + P A + +IE L+ Sbjct: 488 LKPVKATNDRVQELGFKPLTDAMTAKEFMRRPEIDYATAVSFVGPAAEDLDAKIIELLET 547 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E Y Y + + + ++K E++ IP + D+ ++ +++ E ++K + P + QAS+I Sbjct: 548 EIKYEGYIRKALDQVAKMKRMEEKRIPANIDWDAIDSIATEARQKFKKINPETIGQASRI 607 Query: 599 EGMTPAALNLLLIYIKKN 616 G+ PA +++L+IY++ N Sbjct: 608 SGVNPADISILMIYLEGN 625 >gi|37520450|ref|NP_923827.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Gloeobacter violaceus PCC 7421] gi|81710866|sp|Q7NM86|MNMG_GLOVI RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|35211444|dbj|BAC88822.1| glucose inhibited division protein A [Gloeobacter violaceus PCC 7421] Length = 656 Score = 498 bits (1283), Expect = e-139, Method: Compositional matrix adjust. Identities = 261/611 (42%), Positives = 370/611 (60%), Gaps = 6/611 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DV+V+G GH+GCEAA AA+LG T L+T TI CNPA+GG K LV E+DAL Sbjct: 38 FDVVVVGAGHSGCEAALAAARLGCRTLLVTMNLDTIAWQPCNPAVGGPAKSQLVHEVDAL 97 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M ++ D +Q RVLN +GPAV R Q D+ Y +++ + + NL + QG++ Sbjct: 98 GGEMAKITDRTYLQKRVLNSSRGPAVWALRAQTDKREYARELKQVLEATPNLTLRQGQIT 157 Query: 126 GFNT-EKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + + I + + C V+LTTGTFL G I IG+ + AGR G+ + L Sbjct: 158 DIHLGPHDEICGVGTFFDVHFACRAVILTTGTFLGGRIWIGRKSMSAGRAGEFAAEGLTA 217 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGIT 243 + + F+TGRLKTGTPAR+D +T+ + E Q D L FSF R Q+ C +T Sbjct: 218 TLERLGFETGRLKTGTPARVDRRTVDFGVMEVQPPDPELRWFSFDPRAWVEREQLNCYLT 277 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 RT TH++I +++ S +YSGDI++ GPRYCPSIEDKIVRF ++ HQIF+EPEG +T Sbjct: 278 RTTAATHQVIRDHLHLSPMYSGDIEARGPRYCPSIEDKIVRFADKESHQIFIEPEGRDTP 337 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G ST+LPE +Q +RT+PGLE ++RP YA+EYDY+ + + TL TK++ GL Sbjct: 338 ELYVQGFSTSLPETVQIAMLRTLPGLEACAVLRPAYAVEYDYLPATQCYATLMTKRVEGL 397 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQG+VAGIN+AR + R SYIG +IDDL +K + EP Sbjct: 398 FCAGQINGTTGYEEAAAQGIVAGINAARLVRGEALVILPREGSYIGTLIDDLVTKEIREP 457 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRM TSR+EYR+ LR DNAD RLTP+G ++G + + R + K I R L++ L Sbjct: 458 YRMLTSRSEYRLVLRSDNADRRLTPLGREIGLVDDERWGLYQKKIAAITCERQRLETTRL 517 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 +++L + + T + L P +L S+ + V E ++IE Y+ Sbjct: 518 NARDL---PVHLAAKPGSITLADLLRRPGLHYGDLESL-NQGVLLDAQVREGVEIEVKYS 573 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y RQ + + + + R+IP D DY L LS E +EKL+ ++P + QA +I G+ P Sbjct: 574 GYIERQNEQIERVSAQHARVIPADLDYERLSTLSKESREKLNRIRPRTIGQAGRIGGVNP 633 Query: 604 AALNLLLIYIK 614 A ++ LL+Y++ Sbjct: 634 ADVSALLVYLE 644 >gi|307243466|ref|ZP_07525622.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Peptostreptococcus stomatis DSM 17678] gi|306493190|gb|EFM65187.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Peptostreptococcus stomatis DSM 17678] Length = 626 Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust. Identities = 265/616 (43%), Positives = 371/616 (60%), Gaps = 7/616 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+G GHAGCEAA +A++G T +IT + +++CNP+IGG GKG LV+E+DA Sbjct: 8 SYDVIVVGAGHAGCEAALASARMGMKTLMITLSLDAVAALACNPSIGGTGKGQLVKEVDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG DA IQ R+LN KGPAV R Q D+ LY M+ I +QENLD+I EV Sbjct: 68 LGGQMGLNIDATYIQSRILNTAKGPAVHSLRAQTDKNLYHRVMKETIENQENLDLIMDEV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ + + + +L TG +L+ I IG G G + L Sbjct: 128 EEILHEGKRVTGVATRLGCEYKSKATILATGVYLQSTIFIGHDTFKEGPNGLGYAKKLTY 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + + D R KTGTPAR+ +I + + Q DE+++PFSFM + I QI C +TR Sbjct: 188 NLKELGLDMRRFKTGTPARVHKDSIDFSVMDPQPGDEKVVPFSFMNENIERDQITCYLTR 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T T ++I +NI SA+YSG+I+ GPRYCPSIEDKIV+F ++ HQ+F+EPEGL+T Sbjct: 248 TTPATKKLIEDNITRSAMYSGNIEGTGPRYCPSIEDKIVKFNDKETHQLFIEPEGLDTKE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+ST+ P ++Q + R+I GLE V ++RP YAIEYD INP +L LE K + LF Sbjct: 308 MYIQGVSTSFPLDMQVKMYRSIKGLENVRLMRPAYAIEYDCINPTQLKQNLEIKGLENLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ NGT+GYEEAAAQGL+ GIN+ K + + R+D YIGV+IDDL +KG EPY Sbjct: 368 SAGQFNGTSGYEEAAAQGLIVGINAVLKIRGQEALILDRSDGYIGVLIDDLVTKGTNEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSRAEYR+ LR DNAD RLT G +G + + R RF K + + LK+ +T Sbjct: 428 RMMTSRAEYRLYLRQDNADMRLTQKGYDIGLVSQERYDRFLKKKADVDAEIERLKNDRIT 487 Query: 485 SKN----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARK-FSSLVIERLQIE 539 K L I +G + YEFL P+ + L + + K S V ++ I Sbjct: 488 PKEINPILEERGIVGLNNG--LSLYEFLKRPEINYSLLEEVGKGSDKDLSDEVKDQAVIM 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y +QM + + + EK+ + D DY + L E ++KL+ +KP ++ QAS+I Sbjct: 546 IKYEGYISKQMKQIDQFRKLEKKKLNPDLDYDEIDGLRIEARQKLNAIKPTSIGQASRIS 605 Query: 600 GMTPAALNLLLIYIKK 615 G++PA +++LLIY+++ Sbjct: 606 GVSPADISVLLIYLEQ 621 >gi|50915202|ref|YP_061174.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pyogenes MGAS10394] gi|68052091|sp|Q5X9C2|MNMG_STRP6 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|50904276|gb|AAT87991.1| Putative tRNA (5-carboxymethylaminomethyl-2-thiouridylate) synthase subunit GidA [Streptococcus pyogenes MGAS10394] Length = 632 Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust. Identities = 269/618 (43%), Positives = 373/618 (60%), Gaps = 6/618 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAG EA+ +++G T L T + M CNP+IGG KG +VREIDA Sbjct: 8 SYDVIVIGAGHAGVEASLATSRMGCKTLLATINLDMLAFMPCNPSIGGSAKGIVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ ++LN KGPAVR R QAD+ LY M+ + Q NL + Q + Sbjct: 68 LGGEMGKNIDKTYIQMKMLNTGKGPAVRALRAQADKSLYAREMKHTVEKQANLTLRQTMI 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ VV+TTGT LRG I +G+LK +G S +L + Sbjct: 128 DDILVEDGRVVGVLTATGQKFAAKAVVVTTGTALRGEIILGELKYSSGPNNSLASVTLAD 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--NRQIECGI 242 + K + GR KTGTP R+ +I +D+TE Q D++ FSFM+ QI C + Sbjct: 188 NLKKLGLEIGRFKTGTPPRVKASSINYDQTEIQPGDDKPNHFSFMSKDADYLKDQIPCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +H II +N+ + ++SG +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG +T Sbjct: 248 TYTNQTSHDIINQNLYRAPMFSGIVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRDT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q I +I GLEK ++R GYAIEYD + P +L TLETK ISG Sbjct: 308 EEVYVQGLSTSLPEDVQKDLIHSIKGLEKAEMMRTGYAIEYDIVLPHQLRATLETKLISG 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQ NGT+GYEEAA QGL+AGIN+A K + R+D+YIGVMIDDL +KG LE Sbjct: 368 LFTAGQTNGTSGYEEAAGQGLIAGINAALKVQGKSELILKRSDAYIGVMIDDLVTKGTLE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFA-KYIQEYNFLRSL--LK 479 PYR+ TSRAEYR+ LR DNAD RLT IG +G + + R K F K Q N L+ L +K Sbjct: 428 PYRLLTSRAEYRLILRHDNADMRLTEIGRDIGLVDDERWKAFEIKKNQFDNELKRLNSIK 487 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQI 538 + + N + FK A EF+ P+ S + P A + +IE L+ Sbjct: 488 LKPVKATNDRVQELGFKPLTDAMIAKEFMRRPEIDYATAVSFVGPAAEDLDAKIIELLET 547 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E Y Y + + + ++K E++ IP + D+ ++ +++ E ++K + P + QAS+I Sbjct: 548 EIKYEGYIRKALDQVAKMKRMEEKRIPANIDWDAIDSIATEARQKFKKINPETIGQASRI 607 Query: 599 EGMTPAALNLLLIYIKKN 616 G+ PA +++L+IY++ N Sbjct: 608 SGVNPADISILMIYLEGN 625 >gi|168487076|ref|ZP_02711584.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae CDC1087-00] gi|183570028|gb|EDT90556.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae CDC1087-00] Length = 637 Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust. Identities = 259/615 (42%), Positives = 372/615 (60%), Gaps = 6/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DAL Sbjct: 9 YDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + D IQ ++LN KGPAVR R QAD+ELY M++ + +QENL + Q + Sbjct: 69 GGEMAKTIDKTYIQMKMLNTGKGPAVRALRAQADKELYSKEMRKTVENQENLTLRQTMID 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + V++TTGT LRG I IG LK +G S +L ++ Sbjct: 129 EILVEDGKVVGVRTATHQEYAAKAVIVTTGTALRGEIIIGDLKYSSGPNHSLASINLADN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 + + GR KTGTP R+ +I +D TE Q DE FS+ + + Q+ C +T Sbjct: 189 LKELGLEIGRFKTGTPPRVKASSINYDVTEIQPGDEAPNHFSYTSRDEDYVKDQVPCWLT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +H II N+ + +++G +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG NT+ Sbjct: 249 YTNGTSHEIIQNNLHRAPMFTGVVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRNTE 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE++Q + +I GLE ++R GYAIEYD + P +L TLETKKISGL Sbjct: 309 EVYVQGLSTSLPEDVQRDLVHSIKGLENAEMMRTGYAIEYDMVLPHQLRATLETKKISGL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMIDDL +KG +EP Sbjct: 369 FTAGQTNGTSGYEEAAGQGIIAGINAALKIQGKPELILKRSDGYIGVMIDDLVTKGTIEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G ++G + + R RF +++ L S+ L Sbjct: 429 YRLLTSRAEYRLILRHDNADMRLTEMGREIGLVDDERWARFEIKKNQFDNEMKRLDSIKL 488 Query: 484 ---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQIE 539 N + FK TA EFL P+ S Q++ + I P A + +IE ++ E Sbjct: 489 KPVKETNAKVEEMGFKPLTDAVTAKEFLRRPEVSYQDVVAFIGPAAEELDDKIIELIETE 548 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + M + ++K E++ IP + D+ + +++ E ++K ++ P + QAS+I Sbjct: 549 IKYEGYISKAMDQVAKMKRMEEKRIPANIDWDDIDSIATEARQKFKLINPETIGQASRIS 608 Query: 600 GMTPAALNLLLIYIK 614 G+ PA +++L++Y++ Sbjct: 609 GVNPADISILMVYLE 623 >gi|317181522|dbj|BAJ59306.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Helicobacter pylori F57] Length = 621 Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust. Identities = 280/627 (44%), Positives = 373/627 (59%), Gaps = 16/627 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M+ S D++VIGGGHAG EA+ +AAK+GA LIT TIG SCNPAIGGLGKGHL + Sbjct: 1 MVKES-DILVIGGGHAGIEASLIAAKMGARVHLITMLIDTIGLASCNPAIGGLGKGHLTK 59 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+D L G MG + D +G+Q+RVLN KGPAVRG R Q D + YR+ + +L+ NL V Sbjct: 60 EVDVLGGAMGIITDNSGLQYRVLNASKGPAVRGTRAQIDMDTYRIFARNLVLNTPNLSVS 119 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q E + + + N+ + V++TTGTFL+GV+HIG + GR G++ SN Sbjct: 120 QEMTESLIIENDEVVGVTTNINNTYKAKKVIITTGTFLKGVVHIGTHQNQNGRFGENASN 179 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 SL + F RLKTGT R+ G +I ++ E+ F D FS+ T Q+ C Sbjct: 180 SLALNLRDLGFKVERLKTGTCPRVAGNSIDFEGLEEHFGDTNPPYFSYKTKDFNPTQLSC 239 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN TH+II +N + ++SG I+ GPRYCPSIEDKI RF E+ HQ+FLEP+ + Sbjct: 240 FITYTNPITHQIIRDNFHRAPLFSGQIEGIGPRYCPSIEDKINRFSEKERHQLFLEPQTI 299 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + Y NG+ST+LP ++Q + I +I GLE I R GYAIEYD+I P EL TLETKKI Sbjct: 300 HKSEYYINGLSTSLPLDVQEKVIHSIKGLENALITRYGYAIEYDFIQPTELTHTLETKKI 359 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GL+LAGQINGTTGYEEAAAQGL+AGIN+ D R ++YI V+IDDL +KG Sbjct: 360 KGLYLAGQINGTTGYEEAAAQGLMAGINAVLALKNQDPFILKRNEAYISVLIDDLVTKGT 419 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DN RL +LG + + + K QE LK Sbjct: 420 NEPYRMFTSRAEYRLLLREDNTLFRLGEHAYRLGLMEKDFYEGLKKDKQEIQDHLKRLKE 479 Query: 481 LVLTS--------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV 532 VLT L I+ K DG + L+ F+ + + S + V Sbjct: 480 CVLTPSKEVLKRLNELDENPINDKVDGVS-----LLARDSFNPEKMRSFFSFLTPLNERV 534 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 +E+++IE Y Y +Q ++ K IPK F + +P LS E EKL +P +L Sbjct: 535 LEQIKIECKYNIYIEKQHENIAKMDSMLKVSIPKGFVFKGIPGLSLEAVEKLEKFRPKSL 594 Query: 593 LQASKIEGMTPAALNLLLIYI--KKNT 617 +AS+I G+TPA L++L +YI +KN+ Sbjct: 595 FEASEISGITPANLDVLHLYIHLRKNS 621 >gi|227550630|ref|ZP_03980679.1| glucose-inhibited division protein A [Enterococcus faecium TX1330] gi|257896277|ref|ZP_05675930.1| glucose-inhibited division protein A [Enterococcus faecium Com12] gi|293379358|ref|ZP_06625502.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecium PC4.1] gi|227180231|gb|EEI61203.1| glucose-inhibited division protein A [Enterococcus faecium TX1330] gi|257832842|gb|EEV59263.1| glucose-inhibited division protein A [Enterococcus faecium Com12] gi|292641881|gb|EFF60047.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecium PC4.1] Length = 633 Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust. Identities = 269/621 (43%), Positives = 381/621 (61%), Gaps = 9/621 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAG EAA AA++G+ T L+T + M CNP++GG KG +VREIDA Sbjct: 8 AYDVIVVGAGHAGSEAALAAARMGSKTLLLTINLDMVAFMPCNPSVGGPAKGVVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ R+LN KGPAVR R QAD+ Y M+ I + NL + QG V Sbjct: 68 LGGEMGKNIDKTYIQMRMLNTGKGPAVRALRAQADKHAYSTQMKHTIEKEPNLTLRQGIV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E I +V + R VV+T GT LRG I IG+LK +G PS L N Sbjct: 128 EELIVEDGICHGVVTSTGASYRAKAVVITAGTALRGEIIIGELKYSSGPNNSQPSIGLAN 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR--QIECGI 242 + F R KTGTP R+ TI + TE+Q D+ FSF T + Q C + Sbjct: 188 HLKELGFAIERFKTGTPPRVKSSTIDYSVTEEQPGDKEPNHFSFSTPDSAYKLDQESCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T T TH+II +N+ + +++G ++ G RYCPSIEDKIVRF ++ HQ+FLEPEGLNT Sbjct: 248 TYTGETTHQIIRDNLHRAPMFTGIVEGVGARYCPSIEDKIVRFADKQRHQLFLEPEGLNT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q + +I GLEKV ++R GYAIEYD + P +L PTLETK + Sbjct: 308 EEVYVQGLSTSLPEDVQVDMLHSIAGLEKVEMMRTGYAIEYDVVEPHQLRPTLETKVVEN 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQ NGT+GYEEAA QGL+AGIN+A K + + R+D YIGVMIDDL +KG E Sbjct: 368 LYTAGQTNGTSGYEEAAGQGLIAGINAALKVQGKEPLVIKRSDGYIGVMIDDLVTKGTNE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAK----YIQEYNFLRSL- 477 PYR+ TSRAEYR+ LR DNAD RLT +G ++G + E + K + K QE L ++ Sbjct: 428 PYRLLTSRAEYRLLLRHDNADLRLTEMGHRVGLVKEDQYKAYLKKKEAVEQEIKRLMNVR 487 Query: 478 LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 +K L++ + + +DG A +FL P+ + +L P+ + + IE+++ Sbjct: 488 IKPTEEVQAFLATINAAPLKDGV--LASDFLRRPEITYADLLRFIPENEELTRKEIEQVE 545 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ Y Y + M + +++K E + IP++ DY+++ L+ E K+KL ++P + QAS+ Sbjct: 546 IQIKYEGYIKKAMEKVEKLKRMEAKKIPENIDYAAINGLATEAKQKLQKIQPETIAQASR 605 Query: 598 IEGMTPAALNLLLIYIKKNTV 618 I G+ PA L++L++YI++ + Sbjct: 606 ISGVNPADLSILMVYIEQGKI 626 >gi|2258459|gb|AAB63296.1| GidA [Helicobacter pylori] Length = 621 Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust. Identities = 277/621 (44%), Positives = 371/621 (59%), Gaps = 15/621 (2%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALD 66 D++VIGGGHAG EA+ +AAK+GA LIT TIG SCNPAIGGLGKGHL +E+D L Sbjct: 6 DILVIGGGHAGIEASLIAAKMGARVHLITMLIDTIGLASCNPAIGGLGKGHLTKEVDVLG 65 Query: 67 GLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAG 126 G MG + D +G+Q+RVLN KGPAVRG R Q D + YR+ + +L+ NL V Q Sbjct: 66 GAMGIITDHSGLQYRVLNASKGPAVRGTRAQIDMDTYRIFARNLVLNTPNLSVSQEMTES 125 Query: 127 FNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSF 186 E + + + N+ R V++TTGTFL+GV+HIG+ + GR G++ SNSL + Sbjct: 126 LILENDEVVGVTTNINNTYRAKKVIITTGTFLKGVVHIGEHQNQNGRFGENASNSLALNL 185 Query: 187 MKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTN 246 + F RLKTGT R+ G +I ++ E+ F D FS+ T Q+ C IT TN Sbjct: 186 RELGFKVERLKTGTCPRVAGNSIDFEGLEEHFGDANPPYFSYKTKDFNPTQLSCFITYTN 245 Query: 247 LETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVY 306 TH+II +N + ++SG I+ GPRYCPSIEDKI RF E+ HQ+FLEP+ ++ + Y Sbjct: 246 PITHQIIRDNFHRAPLFSGQIEGIGPRYCPSIEDKINRFSEKERHQLFLEPQTIHKNEYY 305 Query: 307 PNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLA 366 NG+ST+LP ++Q + I +I GLE I R GYAIEYD+I P EL LETKKI GL+LA Sbjct: 306 INGLSTSLPLDVQEKVIHSIKGLENALITRYGYAIEYDFIQPTELTHALETKKIKGLYLA 365 Query: 367 GQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRM 426 GQINGTTGYEEAA QGL+AGIN+ R ++YIGV+IDDL +KG EPYRM Sbjct: 366 GQINGTTGYEEAADQGLMAGINAVLALKNQAPFILKRNEAYIGVLIDDLVTKGTNEPYRM 425 Query: 427 FTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS- 485 FTSRAEYR+ LR DN RL +LG + + K K QE LK VLT Sbjct: 426 FTSRAEYRLLLREDNTLFRLGEHAYRLGLMEQDFYKELKKDKQEIQDNLKRLKECVLTPS 485 Query: 486 -------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 L I+ K +G + L+ F+ + + S + V+E+++I Sbjct: 486 KKLLKRLNELDENPINDKVNGVS-----LLARDSFNAEKMRSFFSFLAPLNERVLEQIKI 540 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E Y Y +Q ++ K IPK F + +P LS E EKL +P +L +AS+I Sbjct: 541 ECKYNIYIEKQHENIAKMDSMLKVSIPKGFVFKGIPGLSLEAVEKLEKFRPKSLFEASEI 600 Query: 599 EGMTPAALNLLLIYI--KKNT 617 G+TPA L++L +YI +KN+ Sbjct: 601 SGITPANLDVLHLYIHLRKNS 621 >gi|324991890|gb|EGC23813.1| glucose inhibited division protein A [Streptococcus sanguinis SK405] gi|324996220|gb|EGC28130.1| glucose inhibited division protein A [Streptococcus sanguinis SK678] gi|327458515|gb|EGF04865.1| glucose inhibited division protein A [Streptococcus sanguinis SK1] Length = 659 Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust. Identities = 262/626 (41%), Positives = 381/626 (60%), Gaps = 26/626 (4%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYD+IVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DA Sbjct: 32 SYDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDA 91 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M + D + IQ ++LN KGPAVR R QAD+E+Y M++ + +QENL + Q Sbjct: 92 LGGEMAKNIDKSYIQMKMLNTGKGPAVRALRAQADKEVYSKEMRKTVENQENLTLRQ--- 148 Query: 125 AGFNTEKNIISSIVMQDNSMIRCST----------VVLTTGTFLRGVIHIGKLKIPAGRM 174 +I+ I+++D +I T V++TTGT LRG I IG LK +G Sbjct: 149 -------TMINEILVEDGKVIGVKTATHQEYAAKAVIVTTGTALRGEIIIGDLKYSSGPN 201 Query: 175 GDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DK 232 + L ++ F+ GR KTGTP R+ +I +D TE Q DE+ FS+ + + Sbjct: 202 HSLAAIPLADNLRDLGFEIGRFKTGTPPRVKASSINYDVTEIQPGDEKANHFSYTSRDED 261 Query: 233 ITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQ 292 Q+ C +T TN E+H II N+ + ++SG +K GPRYCPSIEDKIVRF ++ HQ Sbjct: 262 YVKDQVPCWLTYTNAESHEIIQNNLHRAPMFSGIVKGVGPRYCPSIEDKIVRFADKERHQ 321 Query: 293 IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF 352 +FLEPEG +T+ VY G+ST+LPE++Q + +I GLE ++R GYAIEYD I P +L Sbjct: 322 LFLEPEGRDTEEVYVQGLSTSLPEDVQKDLVHSIKGLENAEMMRTGYAIEYDMIMPHQLR 381 Query: 353 PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMI 412 TLETKKISGLF AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMI Sbjct: 382 ATLETKKISGLFTAGQTNGTSGYEEAAGQGIIAGINAALKIQGKPELILKRSDGYIGVMI 441 Query: 413 DDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYN 472 DDL +KG +EPYR+ TSRAEYR+ LR DNAD RLT +G ++G + + R RF +++ Sbjct: 442 DDLVTKGTVEPYRLLTSRAEYRLILRHDNADMRLTEMGREIGLVDDERWARFEIKKNQFD 501 Query: 473 FLRSLLKSLVL---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKF 528 L+S+ L N ++ FK TA EF+ P+ Q++ I P A + Sbjct: 502 NEMKRLESIKLKPVKETNAKVEALGFKPLTDAVTAKEFMRRPEVYYQDVVQFIGPAAEEL 561 Query: 529 SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 +IE ++ E Y Y + + + +++K E++ IP + D+ + +++ E ++K + Sbjct: 562 DEKIIELIETEIKYEGYISKALDQVEKMKRMEEKRIPANIDWDDIDSIATEARQKFKKIN 621 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIK 614 P + QAS+I G+ PA +++L++Y++ Sbjct: 622 PETIGQASRISGVNPADISILMVYLE 647 >gi|322388411|ref|ZP_08062014.1| glucose inhibited division protein A [Streptococcus infantis ATCC 700779] gi|321140724|gb|EFX36226.1| glucose inhibited division protein A [Streptococcus infantis ATCC 700779] Length = 638 Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust. Identities = 261/615 (42%), Positives = 374/615 (60%), Gaps = 6/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DAL Sbjct: 9 YDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + D + IQ ++LN KGPAVR R QAD+ELY M++ + +QENL + Q + Sbjct: 69 GGEMAKTIDKSYIQMKMLNTGKGPAVRALRAQADKELYSKEMRKTVENQENLTLRQTMID 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + V++TTGT LRG I IG LK +G S +L ++ Sbjct: 129 EILVEDGKVVGVRTATHQEYAAKAVIVTTGTALRGEIIIGDLKYSSGPNHSLASINLADN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 + + GR KTGTP R+ +I +D TE Q DE FS+ + + Q+ C +T Sbjct: 189 LKELGIEIGRFKTGTPPRVKASSINYDVTEIQPGDETPNHFSYTSRDEDYVKDQVPCWLT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +H II N+ + +++G +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG NT+ Sbjct: 249 YTNGTSHEIIQNNLHRAPMFTGVVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRNTE 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE++Q + +I GLE ++R GYAIEYD + P +L TLETKKISGL Sbjct: 309 EVYVQGLSTSLPEDVQRDLVHSIKGLENAEMMRTGYAIEYDMVLPHQLRATLETKKISGL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMIDDL +KG +EP Sbjct: 369 FTAGQTNGTSGYEEAAGQGIIAGINAALKIQGKPELILKRSDGYIGVMIDDLVTKGTIEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFA-KYIQEYNFLRSL--LKS 480 YR+ TSRAEYR+ LR DNAD RLT +G ++G + + R RF K Q N ++ L +K Sbjct: 429 YRLLTSRAEYRLILRHDNADMRLTEMGREIGLVDDERWARFEIKKNQFENEMKRLDSIKL 488 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQIE 539 + N + FK TA EFL P+ S Q++ + I P A +IE ++ E Sbjct: 489 KPVKETNAKVEEMGFKPLTDAVTAKEFLRRPEVSYQDVVAFIGPAAEDLDDKIIELIETE 548 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + M + ++K E++ IP + D+ + +++ E ++K ++ P + QAS+I Sbjct: 549 IKYEGYISKAMDQVAKMKRMEEKRIPANIDWDDIDSIATEARQKFKLINPETIGQASRIS 608 Query: 600 GMTPAALNLLLIYIK 614 G+ PA +++L++Y++ Sbjct: 609 GVNPADISILMVYLE 623 >gi|238018229|ref|ZP_04598655.1| hypothetical protein VEIDISOL_00053 [Veillonella dispar ATCC 17748] gi|237864700|gb|EEP65990.1| hypothetical protein VEIDISOL_00053 [Veillonella dispar ATCC 17748] Length = 623 Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust. Identities = 269/620 (43%), Positives = 385/620 (62%), Gaps = 16/620 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIGGGHAGCEAA AA++G T + T I M CNPA+GG GK HLV E+DA Sbjct: 6 NYDVIVIGGGHAGCEAALAAARMGHRTLMATISLDNIALMPCNPAVGGPGKSHLVYELDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG ADA IQ R+LN+ KGPAV R Q+D+ Y+ M++ I + ENL+V Q V Sbjct: 66 LGGQMGINADATAIQMRMLNMGKGPAVHSLRCQSDKIKYQHLMKQTIENTENLNVKQIMV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ IV + VVL TGT+L+G I IG + G G + Sbjct: 126 TELKVEDGKVTGIVTELGEFYGAKAVVLCTGTYLKGKILIGDIDYVGGPNGQRVAEHFSQ 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S + + R KTGTPAR+D +T+ + E Q D FSFM + I + C +T Sbjct: 186 SLLDNGIELMRFKTGTPARVDKRTLNLENMEVQEGDTHHHSFSFMDEWINRNEDVCWLTY 245 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN ETH II NI + +YSG I+ GPRYCPSIEDK+VRF ++ HQ+F+EPEG T+ Sbjct: 246 TNKETHEIITSNIHRAPMYSGKIEGVGPRYCPSIEDKVVRFADKERHQLFVEPEGTGTNE 305 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+ST+LP ++Q+ F+RTIPGLE V I+RP YAIEYD +NP +L P L+ K I GL+ Sbjct: 306 MYVQGMSTSLPMDVQYAFLRTIPGLENVEIMRPAYAIEYDCLNPTQLTPALQVKHIEGLY 365 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ NGT+GYEEAAAQGL+AGIN+A + +R+++YIGV+IDDL +KG EPY Sbjct: 366 SAGQANGTSGYEEAAAQGLMAGINAALWLEGKEPFILARSEAYIGVLIDDLVTKGTNEPY 425 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSR+EYR+ LR DNAD RLT G +G + + R+AK+ + + + L T Sbjct: 426 RMMTSRSEYRLLLRQDNADMRLTEKGRAIGLV---KDDRWAKFTAKKAAIEEAMDMLRNT 482 Query: 485 SKNLSSTSISFKQDGKT---RT---AYEFLSYPDFSIQNLFSICPDA---RKFSSLVIER 535 N S + + + T RT AY+ + + S ++I DA ++++ V E Sbjct: 483 PVNPSKETQALLESLGTAPIRTGIHAYDLVKRNELS----YAIVADAFGLKRYTPDVEEA 538 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 + I +Y Y +QM + +++ E++++PK++DY+ + +S E ++KL+ ++P ++ QA Sbjct: 539 VDISITYEGYIKKQMDQVDKVRKLEEKILPKEWDYTQIKGISLEAQQKLNKIRPHSIGQA 598 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G++PA +++LLI +++ Sbjct: 599 SRISGVSPADVSVLLIQLEQ 618 >gi|332202055|gb|EGJ16124.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae GA41317] Length = 637 Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust. Identities = 259/615 (42%), Positives = 372/615 (60%), Gaps = 6/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DAL Sbjct: 9 YDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + D IQ ++LN KGPAVR R QAD+ELY M++ + +QENL + Q + Sbjct: 69 GGEMAKTIDKTYIQMKMLNTGKGPAVRALRAQADKELYSKEMRKTVENQENLTLRQTMIN 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + V++TTGT LRG I IG LK +G S +L ++ Sbjct: 129 EILVEDGKVVGVRTATHQEYAAKAVIVTTGTALRGEIIIGDLKYSSGPNHSLASINLADN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 + + GR KTGTP R+ +I +D TE Q DE FS+ + + Q+ C +T Sbjct: 189 LKELGLEIGRFKTGTPPRVKASSINYDVTEIQPGDEAPNHFSYTSRDEDYVKDQVPCWLT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +H II N+ + +++G +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG NT+ Sbjct: 249 YTNGTSHEIIQNNLHRAPMFTGVVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRNTE 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE++Q + +I GLE ++R GYAIEYD + P +L TLETKKISGL Sbjct: 309 EVYVQGLSTSLPEDVQRDLVHSIKGLENAEMMRTGYAIEYDMVLPHQLRATLETKKISGL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMIDDL +KG +EP Sbjct: 369 FTAGQTNGTSGYEEAAGQGIIAGINAALKIQGKPELILKRSDGYIGVMIDDLVTKGTIEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G ++G + + R RF +++ L S+ L Sbjct: 429 YRLLTSRAEYRLILRHDNADMRLTEMGREIGLVDDERWARFEIKKNQFDNEMKRLDSIKL 488 Query: 484 ---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQIE 539 N + FK TA EFL P+ S Q++ + I P A + +IE ++ E Sbjct: 489 KPVKETNAKVEEMGFKPLTDAVTAKEFLRRPEVSYQDVVAFIGPAAEELDDKIIELIETE 548 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + M + ++K E++ IP + D+ + +++ E ++K ++ P + QAS+I Sbjct: 549 IKYEGYISKAMDQVAKMKRMEEKRIPANIDWDDIDSIATEARQKFKLINPETIGQASRIS 608 Query: 600 GMTPAALNLLLIYIK 614 G+ PA +++L++Y++ Sbjct: 609 GVNPADISILMVYLE 623 >gi|328945149|gb|EGG39304.1| glucose inhibited division protein A [Streptococcus sanguinis SK1087] Length = 659 Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust. Identities = 263/626 (42%), Positives = 381/626 (60%), Gaps = 26/626 (4%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYD+IVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DA Sbjct: 32 SYDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDA 91 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M + D + IQ ++LN KGPAVR R QAD+ELY M++ + +QENL + Q Sbjct: 92 LGGEMAKNIDKSYIQMKMLNTGKGPAVRALRAQADKELYSKEMRKTVENQENLTLRQ--- 148 Query: 125 AGFNTEKNIISSIVMQDNSMIRCST----------VVLTTGTFLRGVIHIGKLKIPAGRM 174 +I+ I+++D +I T V++TTGT LRG I IG LK +G Sbjct: 149 -------TMINEILVEDGKVIGVKTATHQEYAAKAVIVTTGTALRGEIIIGDLKYSSGPN 201 Query: 175 GDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DK 232 + L ++ F+ GR KTGTP R+ +I +D TE Q DE+ FS+ + + Sbjct: 202 HSLAAIPLADNLRDLGFEIGRFKTGTPPRVKASSINYDVTEIQPGDEKANHFSYTSRDED 261 Query: 233 ITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQ 292 Q+ C +T TN E+H II N+ + ++SG +K GPRYCPSIEDKIVRF ++ HQ Sbjct: 262 YVKDQVPCWLTYTNAESHEIIQNNLHRAPMFSGIVKGVGPRYCPSIEDKIVRFADKERHQ 321 Query: 293 IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF 352 +FLEPEG +T+ VY G+ST+LPE++Q + +I GLE ++R GYAIEYD I P +L Sbjct: 322 LFLEPEGRDTEEVYVQGLSTSLPEDVQKDLVHSIKGLENAEMMRTGYAIEYDMIMPHQLR 381 Query: 353 PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMI 412 TLETKKISGLF AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMI Sbjct: 382 ATLETKKISGLFTAGQTNGTSGYEEAAGQGIIAGINAALKIQGKPELILKRSDGYIGVMI 441 Query: 413 DDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYN 472 DDL +KG +EPYR+ TSRAEYR+ LR DNAD RLT +G ++G + + R RF +++ Sbjct: 442 DDLVTKGTVEPYRLLTSRAEYRLILRHDNADIRLTEMGREIGLVDDERWARFEIKKNQFD 501 Query: 473 FLRSLLKSLVL---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKF 528 L+S+ L N ++ FK TA EF+ P+ S ++ I P A + Sbjct: 502 NEMKRLESIKLKPIKETNAKVEALGFKPLTDAVTAKEFMRRPEVSYKDAVQFIGPAAEEL 561 Query: 529 SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 +IE ++ E Y Y + + + +++K E++ IP + D+ + +++ E ++K + Sbjct: 562 DEKIIELIETEIKYEGYISKALDQVEKMKRMEEKRIPANIDWDDIDSIATEARQKFKKIN 621 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIK 614 P + QAS+I G+ PA +++L++Y++ Sbjct: 622 PETIGQASRISGVNPADISILMVYLE 647 >gi|322378088|ref|ZP_08052574.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus sp. M334] gi|321280925|gb|EFX57939.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus sp. M334] Length = 637 Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust. Identities = 259/615 (42%), Positives = 371/615 (60%), Gaps = 6/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DAL Sbjct: 9 YDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + D IQ ++LN KGPAVR R QAD+ELY M++ + +QENL + Q + Sbjct: 69 GGEMAKTIDKTYIQMKMLNTGKGPAVRALRAQADKELYSKEMRKTVENQENLTLRQTMID 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + V++TTGT LRG I IG LK +G S +L ++ Sbjct: 129 EILVEDGKVVGVRTATHQEYAAKAVIVTTGTALRGEIIIGDLKYSSGPNHSLASINLADN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 + + GR KTGTP R+ +I +D TE Q DE FS+ + + Q+ C +T Sbjct: 189 LKELGLEIGRFKTGTPPRVKASSINYDVTEIQPGDEAPNHFSYTSRDEDYVKDQVPCWLT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +H II N+ + +++G +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG NT+ Sbjct: 249 YTNGTSHEIIQNNLHRAPMFTGVVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRNTE 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE++Q + + +I GLE ++R GYAIEYD + P +L TLETKKISGL Sbjct: 309 EVYVQGLSTSLPEDVQRELVHSIKGLENAEMMRTGYAIEYDMVLPHQLRATLETKKISGL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMIDDL +KG +EP Sbjct: 369 FTAGQTNGTSGYEEAAGQGIIAGINAALKIQGKPELILKRSDGYIGVMIDDLVTKGTIEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G +G + + R RF +++ L S+ L Sbjct: 429 YRLLTSRAEYRLILRHDNADMRLTEMGRDIGLVDDERWSRFEIKKNQFDNEMKRLDSIKL 488 Query: 484 ---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQIE 539 N + FK TA EFL P+ S Q++ + I P A +IE ++ E Sbjct: 489 KPVKETNAKVEEMGFKPLTDAVTAKEFLRRPEVSYQDVVAFIGPAAEDLDDKIIELIETE 548 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + M + ++K E++ IP + D+ + +++ E ++K ++ P + QAS+I Sbjct: 549 IKYEGYISKAMDQVAKMKRMEEKRIPANIDWDDIDSIATEARQKFKLINPETIGQASRIS 608 Query: 600 GMTPAALNLLLIYIK 614 G+ PA +++L++Y++ Sbjct: 609 GVNPADISILMVYLE 623 >gi|222153938|ref|YP_002563115.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus uberis 0140J] gi|222114751|emb|CAR43905.1| glucose inhibited division protein A [Streptococcus uberis 0140J] Length = 633 Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust. Identities = 263/617 (42%), Positives = 375/617 (60%), Gaps = 6/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+VIG GHAG EA+ AA++G T L T + M CNP+IGG KG +VREIDAL Sbjct: 9 YDVVVIGAGHAGVEASLAAARMGCKTLLATINIDMLAFMPCNPSIGGSAKGIVVREIDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ D IQ ++LN KGPAVR R QAD+ LY M+ + QENL + Q + Sbjct: 69 GGEMGKNIDKTYIQMKMLNTGKGPAVRALRAQADKNLYAREMKHTVEKQENLTLRQSIID 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + ++ VV+TTGT LRG I +G+LK +G S +L ++ Sbjct: 129 DILVEDGKVVGVLTATGQKFSARAVVVTTGTALRGEIILGELKYSSGPNNSLASVTLADN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 K + GR KTGTP R+ +I +D+TE Q D + FSF++ + QI C +T Sbjct: 189 LKKLGLEIGRFKTGTPPRVKASSINYDETEIQPGDPKPNHFSFLSKDEDYLQEQIPCWLT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +H II +N+ + ++SG +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG +T+ Sbjct: 249 YTNQTSHDIITKNLYRAPMFSGIVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRDTE 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE++Q + + +I GLE ++R GYAIEYD + P +L TLETK ISGL Sbjct: 309 EVYVQGLSTSLPEDVQKELLHSIKGLENAEMMRTGYAIEYDIVLPHQLRATLETKVISGL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ NGT+GYEEAA QG++AGIN+A K + R+D+YIGVMIDDL +KG LEP Sbjct: 369 FTAGQTNGTSGYEEAAGQGIIAGINAALKVQGKPELILKRSDAYIGVMIDDLVTKGTLEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT IG +G + ++R + F +++ L+S+ L Sbjct: 429 YRLLTSRAEYRLILRHDNADMRLTEIGRTVGLVDDQRWETFQIKKNQFDTEMRRLESIKL 488 Query: 484 ---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQIE 539 N ++ FK TA EF+ P+ + + I A +IE L+ E Sbjct: 489 KPIKETNERVQALGFKPLTDAMTAKEFMRRPEIDYATVVTFIGQAAETLDPKIIELLETE 548 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + ++K E++ IPK+ D+ ++ +++ E ++K + P + QAS+I Sbjct: 549 IKYEGYINKALDQVAKMKRMEEKKIPKNIDWDAIDSIATEARQKFKKINPETIGQASRIS 608 Query: 600 GMTPAALNLLLIYIKKN 616 G+ PA +++L++YI+ N Sbjct: 609 GVNPADISILMVYIEGN 625 >gi|294794210|ref|ZP_06759346.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Veillonella sp. 3_1_44] gi|294454540|gb|EFG22913.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Veillonella sp. 3_1_44] Length = 623 Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust. Identities = 261/620 (42%), Positives = 382/620 (61%), Gaps = 16/620 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIGGGHAGCEAA A++G T + T I M CNPA+GG GK HLV E+DA Sbjct: 6 NYDVIVIGGGHAGCEAALATARMGHRTLMATISLDNIALMPCNPAVGGPGKSHLVYEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG ADA IQ R+LN+ KGPAV R Q+D+ Y+ M++ + + +NL+V Q V Sbjct: 66 LGGQMGINADATAIQMRMLNMGKGPAVHSLRCQSDKIKYQHLMKQTLENTDNLNVKQIMV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ IV + ++L TGT+L+G I IG + G G + Sbjct: 126 TELKVEDGKVTGIVTELGEFYGAKAIILCTGTYLKGKILIGDIDYVGGPNGQRVAEHFSQ 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S + + R KTGTPAR+D +T+ D Q D FSFM + I + C +T Sbjct: 186 SLLDNGIELMRFKTGTPARVDKRTLNLDNMVVQEGDAHHHAFSFMDEWINRNEDVCWLTY 245 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN ETH II NI + +YSG I+ GPRYCPSIEDK+VRF ++ HQ+F+EPEG T+ Sbjct: 246 TNKETHEIIHSNIHRAPMYSGKIEGVGPRYCPSIEDKVVRFADKERHQLFVEPEGTGTNE 305 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+ST+LP ++Q+ F+RTIPGLE V I+RP YAIEYD +NP +L P L+ K I GL+ Sbjct: 306 MYVQGMSTSLPMDVQYAFLRTIPGLENVEIMRPAYAIEYDCLNPTQLTPALQVKHIEGLY 365 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ NGT+GYEEAAAQGL+AGIN+A + +R+++YIGV+IDDL +KG EPY Sbjct: 366 SAGQANGTSGYEEAAAQGLMAGINAALWLEGKEPFILARSEAYIGVLIDDLVTKGTNEPY 425 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSR+EYR+ LR DNAD RLT G ++ + + R+AK+ + + + L T Sbjct: 426 RMMTSRSEYRLLLRQDNADMRLTEKGREISLV---KDDRWAKFTAKKAAIEEAMDMLRNT 482 Query: 485 SKNLSSTSISFKQDGKTRT------AYEFLSYPDFSIQNLFSICPDA---RKFSSLVIER 535 N S + + + T + AY+ + + S ++I DA ++++ V E Sbjct: 483 PVNPSKETQALLESLGTASIKTGIHAYDLVKRNELS----YAIVADAFGLKRYTPDVEEA 538 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 + I +Y Y +QM + +++ E++++PK++DY+ + +S E ++KL+ ++P ++ QA Sbjct: 539 VDISITYEGYIKKQMEQVDKVRKLEEKILPKEWDYAQIKGISLEAQQKLNKIRPHSIGQA 598 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G++PA +++LLI +++ Sbjct: 599 SRISGVSPADVSVLLIQLEQ 618 >gi|313889485|ref|ZP_07823131.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pseudoporcinus SPIN 20026] gi|313122097|gb|EFR45190.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pseudoporcinus SPIN 20026] Length = 633 Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust. Identities = 267/618 (43%), Positives = 373/618 (60%), Gaps = 6/618 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+G GHAG EA+ A++G T L T + M CNP+IGG KG +VREIDA Sbjct: 8 SYDVIVVGAGHAGVEASLATARMGCKTLLATINLDMLAFMPCNPSIGGSAKGIVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ ++LN KGPAVR R QAD+ LY M+ + +QENL + Q + Sbjct: 68 LGGEMGKNIDKTYIQMKMLNTGKGPAVRALRAQADKALYAREMKHTVENQENLTLRQSMI 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ VV+TTGT LRG I +G LK +G S +L + Sbjct: 128 DDILVEDGQVVGVLTATGQKFSAKAVVVTTGTALRGEIILGDLKYSSGPNNSLASVTLAD 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGI 242 + K + GR KTGTP R+ +I + +TE Q D++ FSFM+ + Q+ C + Sbjct: 188 NLKKLGLEIGRFKTGTPPRVKASSIDYSETEIQPGDDKPNHFSFMSKDEDYLKDQVPCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +H II +N+ + ++SG +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG +T Sbjct: 248 TYTNQNSHDIINKNLYRAPMFSGIVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRHT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q + + +I GLE ++R GYAIEYD + P +L TLETK ISG Sbjct: 308 EEVYVQGLSTSLPEDVQKELLHSIKGLENAEMMRTGYAIEYDIVLPHQLRATLETKVISG 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQ NGT+GYEEAA QG++AGIN+A K + R+D+YIGVMIDDL +KG LE Sbjct: 368 LFTAGQTNGTSGYEEAAGQGIIAGINAALKVQGKPELILKRSDAYIGVMIDDLVTKGTLE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF-AKYIQEYNFLRSL--LK 479 PYR+ TSRAEYR+ LR DNAD RLT IG ++G + R F AK Q LR L +K Sbjct: 428 PYRLLTSRAEYRLILRHDNADMRLTEIGRQIGLVDNERWSAFEAKKKQFEKELRRLDSIK 487 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA-RKFSSLVIERLQI 538 + N ++ FK TA EF+ P+ S A + VIE L+ Sbjct: 488 LKPIRETNEKVEALGFKPLTDAMTAKEFMRRPEIDYATAISFIGSADENLDTKVIELLET 547 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E Y Y + + + ++K E++ IPK+ D+ ++ +++ E ++K + P + QAS+I Sbjct: 548 EIKYEGYINKALDQVAKMKRMEEKRIPKNIDWDAIDSIATEARQKFKKINPETIGQASRI 607 Query: 599 EGMTPAALNLLLIYIKKN 616 G+ PA +++L++YI+ N Sbjct: 608 SGVNPADISILMVYIEGN 625 >gi|315172074|gb|EFU16091.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis TX1342] Length = 632 Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust. Identities = 272/625 (43%), Positives = 385/625 (61%), Gaps = 16/625 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+G GHAG EAA AA++G T L+T + M CNP++GG KG +VREIDA Sbjct: 8 SYDVIVVGAGHAGSEAALAAARMGVKTLLLTINLDMVAFMPCNPSVGGPAKGVVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ R+LN KGPAVR R QAD+ Y M+ I +ENL + QG V Sbjct: 68 LGGEMGKNIDKTYIQMRMLNTGKGPAVRALRAQADKHAYATEMKHTIEKEENLTLRQGIV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + +V + R VV+T GT LRG I IG+LK +G PS L N Sbjct: 128 EELIVEDGVCRGVVTSTGAAYRSQAVVITAGTALRGEIIIGELKYSSGPNNSQPSVGLAN 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNRQIE-CGI 242 + + R KTGTP R+ TI + TE+Q D+ FS+ T D N+ E C + Sbjct: 188 HLKELGLEIDRFKTGTPPRVKSSTIDYSVTEEQPGDKEPNHFSYSTPDSAYNQNQEPCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II +N+ + +++G ++ G RYCPSIEDKIVRF ++ HQ+FLEPEGLNT Sbjct: 248 TYTNETTHEIIQKNLHRAPMFTGIVEGVGARYCPSIEDKIVRFADKPRHQLFLEPEGLNT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q + + +I GLEKV ++R GYAIEYD + P +L PTLETK I Sbjct: 308 EEVYVQGLSTSLPEDVQTEMLHSIEGLEKVEMMRTGYAIEYDVVVPHQLRPTLETKVIEN 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQ NGT+GYEEAA QGL+AGIN+A K + + R+D YIGVMIDDL +KG E Sbjct: 368 LYTAGQTNGTSGYEEAAGQGLMAGINAALKIQGKEPLVLKRSDGYIGVMIDDLVTKGTNE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRS----LL 478 PYR+ TSRAEYR+ LR DNAD RLT +G ++G + +++++A Y+ + + + L Sbjct: 428 PYRLLTSRAEYRLILRHDNADLRLTEMGHEIGLV---KEEQYAAYLVKKAAVEAEIARLG 484 Query: 479 KSLVLTSKN----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARK-FSSLVI 533 K + +K L + + +DG A +FL P+ S Q + P + S VI Sbjct: 485 KHRIKPTKEVQAFLETKGAAGLKDGI--LARDFLKRPEISYQEVAQFIPAPEEALDSKVI 542 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I+ Y Y + M + +++K E + IP++ DY ++ L+ E K+KL ++P + Sbjct: 543 EQVEIQIKYEGYIKKAMEKVEKLKRMEAKRIPENIDYQAINGLATEAKQKLQKIQPETIA 602 Query: 594 QASKIEGMTPAALNLLLIYIKKNTV 618 QAS+I G+ PA +++L++YI++ + Sbjct: 603 QASRISGVNPADISILMVYIEQGKI 627 >gi|116493569|ref|YP_805304.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pediococcus pentosaceus ATCC 25745] gi|122264967|sp|Q03D60|MNMG_PEDPA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|116103719|gb|ABJ68862.1| tRNA uridine 5-carboxymethylaminomethyl modification FAD-utilizing enzyme [Pediococcus pentosaceus ATCC 25745] Length = 637 Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust. Identities = 276/630 (43%), Positives = 378/630 (60%), Gaps = 22/630 (3%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R YDVIV+G GHAG EAA AA++G T L+T + M CNP+IGG KG +VREID Sbjct: 10 REYDVIVVGAGHAGSEAALAAARMGNKTLLMTINLDMVAFMPCNPSIGGPAKGIVVREID 69 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G MGR D +Q R+LN KGPAVR R QAD+ Y M++ I ++ NL + QG Sbjct: 70 ALGGEMGRNIDKTYVQMRMLNTGKGPAVRALRAQADKHAYHAEMKKTIEAEPNLTLRQGI 129 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + ++ + + +VVLT GT RG I IG+L+ +G P+NS Sbjct: 130 VDDLIVEDGVCKGVITNTGARYQAKSVVLTLGTAARGKIIIGELQYSSG-----PNNSQA 184 Query: 184 ------NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--- 234 N K+ FD R KTGTP R+DG TI +D+TE+Q DE FSF T Sbjct: 185 ALELTKNLTEKYHFDLERFKTGTPPRVDGGTINYDETEEQPGDEVPNHFSFQTPDSKYIE 244 Query: 235 -NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQI 293 Q+ C +T TN +TH II EN+ + ++SG I+ GPRYCPSIEDKIVRF +++ HQ+ Sbjct: 245 LKNQLSCWLTYTNEKTHEIIRENLDRAPMFSGMIEGVGPRYCPSIEDKIVRFADKSRHQL 304 Query: 294 FLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFP 353 FLEPEG TD Y G+ST++PEE+Q Q + +I GLE+ ++RPGYAIEYD + P +L Sbjct: 305 FLEPEGRKTDEWYVQGLSTSMPEEVQQQILHSIKGLEEAEMMRPGYAIEYDVVAPYQLKN 364 Query: 354 TLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMID 413 TLETK + L+ AGQ NGT+GYEEAA QGL+AGIN+ R++ + + R+D+YIGVMID Sbjct: 365 TLETKLVKNLYTAGQTNGTSGYEEAAGQGLIAGINAGRRALGKEPLTLKRSDAYIGVMID 424 Query: 414 DLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQ---- 469 DL +KG EPYR+ TSRAEYR+ LR DNAD RLT +G LG + + F + Q Sbjct: 425 DLVTKGTKEPYRLLTSRAEYRLILRHDNADLRLTEVGHNLGLVSDEEYNAFLEKKQDIKD 484 Query: 470 EYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKF 528 E L + K L S + +DG A EFL P+ + +L I + Sbjct: 485 ELQRLSEIRIKPSQVQKFLESKGSNGLKDGV--LASEFLRRPEVNYSDLLKFIDAPEKDL 542 Query: 529 SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 VIE+++IE+ YA Y + +K E++ IP DY ++ L+ E ++KL ++ Sbjct: 543 DRRVIEQVEIETKYAGYIKKAQDRVDRLKRMEEKAIPDRIDYEAINGLATEGRQKLEKIR 602 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIKKNTV 618 P + QAS+I G+TPA + +L +YI++ + Sbjct: 603 PTTIAQASRISGVTPADIAILSVYIQQGKI 632 >gi|307710238|ref|ZP_07646681.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus mitis SK564] gi|307619000|gb|EFN98133.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus mitis SK564] Length = 637 Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust. Identities = 261/615 (42%), Positives = 373/615 (60%), Gaps = 6/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DAL Sbjct: 9 YDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + D IQ ++LN KGPAVR R QAD+ELY M++ + +QENL + Q + Sbjct: 69 GGEMAKTIDKTYIQMKMLNTGKGPAVRALRAQADKELYSKEMRKTVENQENLTLRQTMID 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + V++TTGT LRG I IG LK +G S +L ++ Sbjct: 129 EILVEDGKVVGVRTATHQEYAAKAVIVTTGTALRGEIIIGDLKYSSGPNHSLASINLADN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 + + GR KTGTP R+ +I +D TE Q DE FS+ + + Q+ C +T Sbjct: 189 LKELGLEIGRFKTGTPPRVKASSINYDVTEIQPGDEAPNHFSYTSRDEDYVKDQVPCWLT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +H II N+ + +++G +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG NT+ Sbjct: 249 YTNGTSHEIIQNNLHRAPMFTGVVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRNTE 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE++Q + +I GLE ++R GYAIEYD + P +L TLETKKISGL Sbjct: 309 EVYVQGLSTSLPEDVQRDLVHSIKGLENAEMMRTGYAIEYDMVLPHQLRATLETKKISGL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMIDDL +KG +EP Sbjct: 369 FTAGQTNGTSGYEEAAGQGIIAGINAALKVQGKPELILKRSDGYIGVMIDDLVTKGTIEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFA-KYIQEYNFLRSL--LKS 480 YR+ TSRAEYR+ LR DNAD RLT +G ++G + + R RF K Q N ++ L +K Sbjct: 429 YRLLTSRAEYRLILRHDNADMRLTEMGREIGLVDDERWARFEIKKNQFENEMKRLDSIKL 488 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQIE 539 + N + FK TA EFL P+ S Q++ + I P A +IE ++ E Sbjct: 489 KPVKETNAKVEEMGFKPLTDAVTAKEFLRRPEVSYQDVVAFIGPAAEDLDDKIIELIETE 548 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + M + ++K E++ IP + D+ + +++ E ++K ++ P + QAS+I Sbjct: 549 IKYEGYISKAMDQVAKMKRMEEKRIPANIDWDDIDSIATEARQKFKLINPETIGQASRIS 608 Query: 600 GMTPAALNLLLIYIK 614 G+ PA +++L++Y++ Sbjct: 609 GVNPADISILMVYLE 623 >gi|238878791|gb|EEQ42429.1| hypothetical protein CAWG_00640 [Candida albicans WO-1] Length = 695 Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust. Identities = 262/632 (41%), Positives = 387/632 (61%), Gaps = 30/632 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 + VIVIGGGHAGCEAA +A+ T LIT + IG+ SCNP++GG+GKG L+RE+DAL Sbjct: 38 HPVIVIGGGHAGCEAATGSARSQTPTTLITPYINKIGTASCNPSMGGVGKGTLLREVDAL 97 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DG+ R+ D AGI FR+LN +G AV GPR Q DR++Y MQ+EIL+ NL V++ +V Sbjct: 98 DGVSARITDKAGIHFRILNASRGAAVHGPRAQIDRKIYLEEMQKEILNYPNLKVLEAQVE 157 Query: 126 GF-------------NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAG 172 E + +++ D +++ VV+TTGTFL G IHIG P+G Sbjct: 158 DIIIKPVLSNREDFSGREFGEVKGVILSDGRVLKSEKVVVTTGTFLGGEIHIGLKCFPSG 217 Query: 173 RMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK 232 RMG+ + L + + F GRLKTGTP RL +TI + +Q +D P S+M DK Sbjct: 218 RMGEDATFGLSKTLKQAGFRLGRLKTGTPPRLSSRTINFKGLIEQPSDFPPQPMSYMNDK 277 Query: 233 I--TNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNG 290 + ++ ++C T+TN E H+II +N+ S +K GPRYCPSIE K+++F ++ Sbjct: 278 VYLEDQLMKCYQTKTNPEFHKIIADNLDKSIHIRETVK--GPRYCPSIESKVIKFPHKDY 335 Query: 291 HQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKE 350 H ++LEPEGL++D++YPNGIS +PEEIQ + +R +PG E V + +PGY +EYD+I+P+E Sbjct: 336 HYVWLEPEGLDSDLIYPNGISCTMPEEIQEKLVRLMPGCENVTMTQPGYGVEYDFIDPRE 395 Query: 351 LFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGV 410 L TLETK ++GL+LAGQINGTTGYEEAAAQG +AGIN+ + + R D + + Sbjct: 396 LKSTLETKLVNGLYLAGQINGTTGYEEAAAQGCIAGINAGLSYLQKPLLELKRPDGLVAI 455 Query: 411 MIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQE 470 +IDDL +KGV EPYRMFTSR+E+R S+R DNAD+RLT G +LG + E R + F K + Sbjct: 456 LIDDLITKGVEEPYRMFTSRSEFRFSIRSDNADDRLTQKGYELGVVSEERYQFFKKEADQ 515 Query: 471 YNFLRSLLKSLVLTSKNLSSTSISFKQDGKTR---TAYEFLSYPDFSIQNLF-------- 519 + +++ L L L+ K + K D + + ++ LSYP SI ++ Sbjct: 516 FKDIKNALSELKLSGKQWAPGLQGLKTDTRENDKVSGWKLLSYPGVSINDILPHMSHFMT 575 Query: 520 SICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPAL--S 577 + P + S + ++ + S Y R+ + + +P++F Y + +L S Sbjct: 576 QVPPCLQNVSMRLQNKIDVVSDYDPIMYREKANLNTFESLDMYKLPQNFTYDNSGSLKIS 635 Query: 578 NELKEKLSILKPFNLLQASKIEGMTPAALNLL 609 +E+ L+I++P + QA ++G+TP A+N L Sbjct: 636 HEVCTILNIVQPTTIGQAQSLQGITPTAINEL 667 >gi|332519444|ref|ZP_08395911.1| glucose inhibited division protein A [Lacinutrix algicola 5H-3-7-4] gi|332045292|gb|EGI81485.1| glucose inhibited division protein A [Lacinutrix algicola 5H-3-7-4] Length = 623 Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust. Identities = 278/637 (43%), Positives = 388/637 (60%), Gaps = 36/637 (5%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M N YDVIV+G GHAG EAAA AA +G+ T LIT I MSCNPA+GG+ KG +VR Sbjct: 1 MFNEVYDVIVVGAGHAGSEAAAAAANMGSKTLLITMNLQNIAQMSCNPAMGGIAKGQIVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADR----ELYRLAMQREILSQEN 116 EIDAL G G V+D + IQF++LN KGPA+ PR Q+DR E +RL +++ +N Sbjct: 61 EIDALGGYSGIVSDTSAIQFKMLNKSKGPAMWSPRVQSDRMRFAEDWRLLLEQ----TQN 116 Query: 117 LDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGD 176 LD Q V+G E + + ++ +VVLT GTFL G+IHIG GR G+ Sbjct: 117 LDFYQEMVSGLVVENGKVVGVKTSLGITVKAKSVVLTNGTFLNGLIHIGDKNFGGGRAGE 176 Query: 177 SPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITN 235 + + ++ F++GR+KTGTP R+DG+++ + K +Q D FS++ T K Sbjct: 177 RAATGITEQLIELGFESGRMKTGTPPRVDGRSLDYSKMIEQPGDLNPEKFSYLDTTKPLE 236 Query: 236 RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFL 295 Q C +T T+ + H ++ E S +++G IKS GPRYCPSIEDKI RF +++ HQ+F+ Sbjct: 237 NQRSCFMTYTSEKVHDLLREGFDRSPMFNGRIKSLGPRYCPSIEDKINRFADKDRHQLFV 296 Query: 296 EPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTL 355 EPEG NT +Y NG ST+LPE++Q +R++ G E V RPGYAIEYDY P +L TL Sbjct: 297 EPEGWNTVEMYINGFSTSLPEDVQFNALRSVAGFENVKFFRPGYAIEYDYFPPTQLKHTL 356 Query: 356 ETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDL 415 ETK + GL+ AGQINGTTGYEEAA+QGL+AGIN+A K + D R ++YIGV+IDDL Sbjct: 357 ETKLVDGLYFAGQINGTTGYEEAASQGLMAGINAALKVQEKDSFILQRNEAYIGVLIDDL 416 Query: 416 TSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLR 475 +KG EPYRMFTSRAEYR LR DNAD RLTP G LG E+R KR + + N Sbjct: 417 ITKGTEEPYRMFTSRAEYRTLLRQDNADIRLTPRGYDLGLASEKRLKRMEEKLNASNQFV 476 Query: 476 SLLKSLVLTSKNL-----SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS 530 K +T+ + S S S KQ GK ++ + P+ + D RKF Sbjct: 477 QFFKDTSVTANDANVVLESKNSASVKQQGKM---FKLFARPNIDMD-------DMRKFEK 526 Query: 531 L------------VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSN 578 + V+E+ +I+ YA Y ++ A ++ E IP +F+YS L ++S Sbjct: 527 VETYIQENNLDREVLEQAEIQVKYAGYISKEKNNADKLNRLENIKIPANFNYSQLKSMSL 586 Query: 579 ELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 E +EKL+ ++P + QAS+I G++PA +++LL+++ + Sbjct: 587 EAREKLNKIQPVTISQASRISGVSPADISVLLVFMGR 623 >gi|166032900|ref|ZP_02235729.1| hypothetical protein DORFOR_02621 [Dorea formicigenerans ATCC 27755] gi|166027257|gb|EDR46014.1| hypothetical protein DORFOR_02621 [Dorea formicigenerans ATCC 27755] Length = 640 Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust. Identities = 272/626 (43%), Positives = 383/626 (61%), Gaps = 21/626 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+ VIG GHAGCEAA AA++G T + T +I M CNP IGG KGHLV+E+DAL Sbjct: 15 YDIAVIGAGHAGCEAALAAARMGFKTVVFTVSVESIAMMPCNPNIGGSSKGHLVKEVDAL 74 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+V D IQ ++LN KGPAV R QAD+E Y M+R + +QENLDV Q EV Sbjct: 75 GGEMGKVIDKTFIQSKMLNQSKGPAVHSLRAQADKEQYSRTMRRVLENQENLDVRQTEVV 134 Query: 126 GFNTE------KNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 TE K + + + + R VVL TGT+LR G++ G G + Sbjct: 135 NILTEEVCESGKKKVIGVQILSGGIYRVKAVVLCTGTYLRARCVYGEVSNATGPNGLQAA 194 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQ 237 N L + R KTGTPAR+D ++I ++K E Q+ DER+ PFSF T D I Q Sbjct: 195 NHLTECLKNLGINMYRFKTGTPARIDKRSIDFNKMEAQYGDERITPFSFTTNPDDIQIDQ 254 Query: 238 IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 + C +T TN +TH II N+ S +YSG I+ GPRYCPSIEDK+VRF ++N HQ+F+EP Sbjct: 255 VPCWLTYTNEKTHEIIRNNLDRSPLYSGMIEGTGPRYCPSIEDKVVRFADKNRHQVFIEP 314 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EG++T+ +Y G+S++LPE++Q+ R++ GLE I+R YAIEYD I+ ++L P+LE Sbjct: 315 EGIDTNEMYIGGMSSSLPEDVQYDMYRSVAGLEHAKIVRNAYAIEYDCIDARQLKPSLEF 374 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 ++I GLF GQ NG++GYEEAA QGL+AGIN+ARK K + + R+ +YIGV+IDDL + Sbjct: 375 REIEGLFSGGQFNGSSGYEEAACQGLIAGINAARKLQKKEAVVLDRSQAYIGVLIDDLVT 434 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF---AKYIQEYNFL 474 K EPYRM TSRAEYR+ LR DNAD RLT IG ++G I + R +R K I+E + Sbjct: 435 KESHEPYRMMTSRAEYRLLLRQDNADQRLTEIGYEIGLISQDRYERLKLKEKLIEEE--V 492 Query: 475 RSLLKSLVLTSKNLSSTSISFKQD--GKTRTAYEFLSYPDFSIQNLFSICPDAR-----K 527 + V TS+ + + ++ + E + P+ + Q L +I +AR Sbjct: 493 SRVEHVHVGTSEKVQNLLAQYQSTPLNSGISLAELIRRPELTYQVLTTI-DEARPEFPKD 551 Query: 528 FSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSIL 587 S V E++ I Y Y RQ + ++ K E + IP++ DY + +L E +KL Sbjct: 552 LSEEVSEQVNISIKYDGYIKRQKKQVEQFKKLENKKIPENIDYDQVKSLRIEAVQKLKEF 611 Query: 588 KPFNLLQASKIEGMTPAALNLLLIYI 613 +P ++ QAS+I G++PA +++LL+Y+ Sbjct: 612 RPVSIGQASRISGVSPADISVLLVYL 637 >gi|269123717|ref|YP_003306294.1| glucose inhibited division protein A [Streptobacillus moniliformis DSM 12112] gi|268315043|gb|ACZ01417.1| glucose inhibited division protein A [Streptobacillus moniliformis DSM 12112] Length = 635 Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust. Identities = 268/634 (42%), Positives = 403/634 (63%), Gaps = 27/634 (4%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 ++ YDV+VIG GHAG EAA +A+LG TA+ T IG MSCNP++GG K HLV+E Sbjct: 1 MDNKYDVLVIGAGHAGIEAALASARLGLKTAMFTITLDNIGVMSCNPSLGGPAKSHLVKE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DAL G M + D + +Q R+LN KKGPAVR R+QADR++Y M++ + +QENLDVIQ Sbjct: 61 LDALGGQMSKTIDKSFVQIRILNTKKGPAVRSLRSQADRKIYARNMKKIVENQENLDVIQ 120 Query: 122 GEVAGFNTEKNIISSIVM-----QDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGD 176 V EK+ I V+ ++ +V++ +GTFL G++++G I GRMG+ Sbjct: 121 DIVTELIYEKDEIKDFVVRGIKTKNGLEFLAKSVIICSGTFLNGLLYVGDKIIEGGRMGE 180 Query: 177 SPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFAD-ERLIPFSFMT-DKI- 233 + L +S + D R KTGT R+D +TI +D E+Q + ++I FS T D++ Sbjct: 181 LSAKDLTSSLVDMGLDIRRFKTGTSPRIDARTINFDILEEQPGEMSKVIKFSNSTPDEVI 240 Query: 234 -TNRQIECGITRTNLETHRIIMENIKHSAIYSGDIK-SYGPRYCPSIEDKIVRFGERNGH 291 +Q+ C ITRTNL+ H+II +N+ S +++G IK S GPRYCPSIEDK+V+F +++ H Sbjct: 241 RNTKQLSCYITRTNLDLHKIIKDNLNRSPLFNGTIKDSVGPRYCPSIEDKVVKFNDKDSH 300 Query: 292 QIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKEL 351 +FLEPEG +T+ VY +G+ST+ P ++Q + +R I GLE I+R GYA+EYD++NP EL Sbjct: 301 HLFLEPEGFDTNEVYISGLSTSYPADLQQKMVRQIEGLENARIMRYGYAVEYDFVNPNEL 360 Query: 352 FPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 TLETKK+ GL+LAGQINGT+GYEEAA QGL+AGIN++ + + R +SYI + Sbjct: 361 EYTLETKKVKGLYLAGQINGTSGYEEAAVQGLIAGINASLAIKGEEPLLLERNNSYIATL 420 Query: 412 IDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEY 471 IDDL +K + EPYRMFT+R+EYR+ LR DNAD RL+ IG ++G + E ++K +++ Sbjct: 421 IDDLITKEIEEPYRMFTARSEYRLILREDNADLRLSHIGYRIGLVDE---STYSKVLEKL 477 Query: 472 NFLRSLLKSLVLTSKNLSSTSIS--FKQDGKT----RTAYEFLSYPDFSIQNLFSICPDA 525 N + +K L T +S+ + +++ +T T E L P F+ ++ I D Sbjct: 478 NNVEKTIKVLENTKLGVSNKKLVEILEKNNETLKSGTTLKELLRRPSFTYDDIKYIAEDI 537 Query: 526 RK----FSSLVIERLQIESSYAAYTGR--QMIEAKEIKFEEKRLIPKDFDYSSLPALSNE 579 F +++++ Y Y + MIE K+ K EEK +IP + ++ + ++ E Sbjct: 538 EMENICFDEETEYQIEVQIKYEGYINKANAMIE-KQRKLEEK-IIPSELNFLEMKGITGE 595 Query: 580 LKEKLSILKPFNLLQASKIEGMTPAALNLLLIYI 613 K+KL+ KP + QAS+I G+TPA ++++L+Y+ Sbjct: 596 AKQKLNERKPHTVGQASRIAGVTPADISVILMYL 629 >gi|255536701|ref|YP_003097072.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Flavobacteriaceae bacterium 3519-10] gi|255342897|gb|ACU09010.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Flavobacteriaceae bacterium 3519-10] Length = 620 Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust. Identities = 274/620 (44%), Positives = 377/620 (60%), Gaps = 5/620 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 MI+ YDVIV+G GHAG EAAA AA +G+ T LIT TIG MSCNPA+GG+ KG +VR Sbjct: 1 MISEIYDVIVVGAGHAGSEAAAAAANMGSKTLLITMNMQTIGQMSCNPAMGGIAKGQIVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDA+ G G +AD + IQF++LN+ KGPA+ PRTQ DR L+ + + + NLD Sbjct: 61 EIDAMGGYSGIIADKSAIQFKMLNLSKGPAMWSPRTQNDRMLFAEEWRIALENTPNLDFF 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E N + +V IR +VVLT GTFL G+IH+G ++ GRMG+ + Sbjct: 121 QDMVKSLIIENNKVCGVVTSLGIQIRGKSVVLTNGTFLNGLIHVGDKQLGGGRMGEPRAF 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 + + F+ GR+KTGTP R+DG+++ + K E+Q DE FS+ +Q+ C Sbjct: 181 GITEQLVSLGFEAGRMKTGTPPRVDGRSLDYSKMEEQKGDENPQKFSYSDTPTLTKQLSC 240 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 I TN H I+ E S +++G I+S GPRYCPSIEDK+ RF ER HQ+F+EPEG Sbjct: 241 HIVYTNETVHEILKEGFDRSPMFNGTIQSIGPRYCPSIEDKVNRFAERTRHQLFVEPEGW 300 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T +Y NG S++LPE++Q + ++ IPG E V + RPGYAIEYDY P +L TLETK I Sbjct: 301 RTVEIYVNGFSSSLPEDVQIKAMKHIPGFENVKVFRPGYAIEYDYFPPTQLHHTLETKLI 360 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 L+ AGQINGTTGYEEAA QGL+AGIN+ K + + R ++YIGV+IDDL +KG Sbjct: 361 ENLYFAGQINGTTGYEEAAGQGLMAGINAHNKVKEKEEFILKRDEAYIGVLIDDLITKGT 420 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT +G E R K I + + L L+ Sbjct: 421 EEPYRMFTSRAEYRLLLRQDNADVRLTEKSFNIGLADEHRLKNVQNKIAQGSELEGFLRE 480 Query: 481 LVLTSK--NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS---ICPDARKFSSLVIER 535 L N I + A + L+ P+ ++Q L I + +FS V E+ Sbjct: 481 TSLKPGIINPILAEIESAPVDQAYKASQILTRPNMTLQKLEQIDFIKERSSEFSDEVKEQ 540 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 +I Y Y ++ ++ E IP+DFD+ + +LS E ++KL+ ++P + QA Sbjct: 541 AEINIKYKGYIDKERESVAKMTRLETIAIPEDFDFCKINSLSAESRQKLNKVRPRTIAQA 600 Query: 596 SKIEGMTPAALNLLLIYIKK 615 +I G++PA +N+LLIY+ + Sbjct: 601 GRISGVSPADMNVLLIYLGR 620 >gi|313887617|ref|ZP_07821299.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Peptoniphilus harei ACS-146-V-Sch2b] gi|312846226|gb|EFR33605.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Peptoniphilus harei ACS-146-V-Sch2b] Length = 634 Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust. Identities = 268/623 (43%), Positives = 380/623 (60%), Gaps = 20/623 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D +VIG GHAG EAA +A+LGA T L+ ++ +SCNP IGG GKGHLVREIDAL Sbjct: 12 FDTVVIGAGHAGSEAALASARLGAKTLLLCINLDSVAQLSCNPNIGGTGKGHLVREIDAL 71 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + D IQ ++LN KGPAV R QAD+ Y M+R + ++ENL +++ E Sbjct: 72 GGEMAKNIDKTFIQSKMLNTSKGPAVHSLRVQADKRKYHDEMKRVLENEENLYLVEDEAI 131 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E N ++ ++ ++ S VV+ +GT+LR I +G++ +G G P+N L +S Sbjct: 132 RILKEGNKVTGVLTRNGSKYNTKAVVICSGTYLRARIFMGEVNFSSGPSGFGPANHLSSS 191 Query: 186 FMK-FDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGI 242 + F RLKTGTPAR+ K+I + +Q DE +IPFSF+ K Q C + Sbjct: 192 LEEDFGMKLQRLKTGTPARVLRKSIDFSVMTEQAGDEEIIPFSFLNIDKKYDIHQELCYL 251 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T T + H II NI+ SA+ GDI+ GPRYCPSIEDK++RF +R+ HQ+F+EPEGL T Sbjct: 252 TYTTKKCHEIIRNNIERSALALGDIEGKGPRYCPSIEDKVMRFADRDSHQVFIEPEGLTT 311 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 D +Y G+S++LP E+QH+F + I G+E I+RP YAIEYD I+ L +LE G Sbjct: 312 DEMYIQGVSSSLPVEVQHEFYKEIIGMENCKILRPAYAIEYDAIDATLLKRSLEHMDYDG 371 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQING++GYEEA AQG+VAGIN+A K D R+++YIGV+IDDL +KG E Sbjct: 372 LFFAGQINGSSGYEEAGAQGIVAGINAALKVQGKDPFILDRSEAYIGVLIDDLVTKGTRE 431 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF----------AKYIQEYN 472 PYRM TSRAEYR++LR DNAD RLT G ++G + + R + + K I++ Sbjct: 432 PYRMMTSRAEYRLTLRQDNADLRLTEKGRQIGLVDDERYQGYLYRKKAIEDEIKRIKKIQ 491 Query: 473 FLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV 532 + + +L S + T SF + YE + P+F + L PD V Sbjct: 492 INPTAENNKILESLGSTETQNSF-------SLYEMIKRPEFDYKKLAVFDPDRPLVRDDV 544 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 I ++IE Y Y +Q I+ K+ K E + + K+ DY S+ L E KEKLS ++P ++ Sbjct: 545 IRNIEIEIKYEGYIKKQEIQIKQFKKLENKKLDKNIDYKSIEGLRIEAKEKLSDIRPESI 604 Query: 593 LQASKIEGMTPAALNLLLIYIKK 615 QAS+I G++PA +N+LLI++++ Sbjct: 605 GQASRITGVSPADINVLLIHLEQ 627 >gi|182683093|ref|YP_001834840.1| glucose-inhibited division protein A [Streptococcus pneumoniae CGSP14] gi|182628427|gb|ACB89375.1| glucose-inhibited division protein A [Streptococcus pneumoniae CGSP14] Length = 637 Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust. Identities = 259/615 (42%), Positives = 371/615 (60%), Gaps = 6/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DAL Sbjct: 9 YDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + D IQ ++LN KGPAVR R QAD+ELY M++ + +Q+NL + Q + Sbjct: 69 GGEMAKTIDKTYIQMKMLNTGKGPAVRALRAQADKELYSKEMRKTVENQDNLTLRQTMID 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E I + + V++TTGT LRG I IG LK +G S +L ++ Sbjct: 129 EILVEDGKIVGVRTATHQEYAAKAVIVTTGTALRGEIIIGDLKYSSGPNHSLASINLADN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 + + GR KTGTP R+ +I +D TE Q DE FS+ + + Q+ C +T Sbjct: 189 LKELGLEIGRFKTGTPPRVKASSINYDVTEIQPGDEAPNHFSYTSRDEDYVKDQVPCWLT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +H II N+ + +++G +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG NT+ Sbjct: 249 YTNGTSHEIIQNNLHRAPMFTGVVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRNTE 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE++Q + +I GLE ++R GYAIEYD + P +L TLETKKISGL Sbjct: 309 EVYVQGLSTSLPEDVQRDLVHSIKGLENAEMMRTGYAIEYDMVLPHQLRATLETKKISGL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMIDDL +KG +EP Sbjct: 369 FTAGQTNGTSGYEEAAGQGIIAGINAALKIQGKPELILKRSDGYIGVMIDDLVTKGTIEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G ++G + + R RF +++ L S+ L Sbjct: 429 YRLLTSRAEYRLILRHDNADMRLTEMGREIGLVDDERWARFEIKKNQFDNEMKRLDSIKL 488 Query: 484 ---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQIE 539 N + FK TA EFL P+ S Q++ + I P A +IE ++ E Sbjct: 489 KPVKETNAKVEEMDFKPLTDAVTAKEFLRRPEVSYQDVVAFIGPAAEDLDDKIIELIETE 548 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + M + ++K E++ IP + D+ + +++ E ++K ++ P + QAS+I Sbjct: 549 IKYEGYISKAMDQVAKMKRMEEKRIPANIDWDDIDSIATEARQKFKLINPETIGQASRIS 608 Query: 600 GMTPAALNLLLIYIK 614 G+ PA +++L++Y++ Sbjct: 609 GVNPADISILMVYLE 623 >gi|289168788|ref|YP_003447057.1| NAD/FAD-binding enzyme GidA [Streptococcus mitis B6] gi|288908355|emb|CBJ23197.1| NAD/FAD-binding enzyme GidA [Streptococcus mitis B6] Length = 637 Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust. Identities = 259/615 (42%), Positives = 371/615 (60%), Gaps = 6/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DAL Sbjct: 9 YDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + D IQ ++LN KGPAVR R QAD+ELY M++ + +QENL + Q + Sbjct: 69 GGEMAKTIDKTYIQMKMLNTGKGPAVRALRAQADKELYSKEMRKTVENQENLTLRQTMID 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + V++TTGT LRG I IG LK +G S +L ++ Sbjct: 129 EILVEDGKVVGVRTATHQEYAAKAVIVTTGTALRGEIIIGDLKYSSGPNHSLASINLADN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 + + GR KTGTP R+ +I +D TE Q DE FS+ + + Q+ C +T Sbjct: 189 LKELGLEIGRFKTGTPPRVKASSINYDVTEIQPGDEAPNHFSYTSRDEDYVKDQVPCWLT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +H II N+ + +++G +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG NT+ Sbjct: 249 YTNGTSHEIIQNNLHRAPMFTGVVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRNTE 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE++Q + +I GLE ++R GYAIEYD + P +L TLETKKISGL Sbjct: 309 EVYVQGLSTSLPEDVQRDLVHSIKGLENAEMMRTGYAIEYDMVLPHQLRATLETKKISGL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMIDDL +KG +EP Sbjct: 369 FTAGQTNGTSGYEEAAGQGIIAGINAALKIQGKPELILKRSDGYIGVMIDDLVTKGTIEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G ++G + + R RF +++ L S+ L Sbjct: 429 YRLLTSRAEYRLILRHDNADMRLTEMGREIGLVDDERWARFEIKKNQFDNEMKRLDSIKL 488 Query: 484 ---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQIE 539 N + FK TA EFL P+ S Q++ + I P A +IE ++ E Sbjct: 489 KPVKETNAKVEEMGFKPLTDAVTAKEFLRRPEVSYQDVVAFIGPAAEDLDDKIIELIETE 548 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + M + ++K E++ IP + D+ + +++ E ++K ++ P + QAS+I Sbjct: 549 IKYEGYISKAMDQVAKMKRMEEKRIPANIDWDDIDSIATEARQKFKLINPETIGQASRIS 608 Query: 600 GMTPAALNLLLIYIK 614 G+ PA +++L++Y++ Sbjct: 609 GVNPADISILMVYLE 623 >gi|307707800|ref|ZP_07644277.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus mitis NCTC 12261] gi|307616060|gb|EFN95256.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus mitis NCTC 12261] Length = 637 Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust. Identities = 259/615 (42%), Positives = 371/615 (60%), Gaps = 6/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DAL Sbjct: 9 YDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + D IQ ++LN KGPAVR R QAD+ELY M++ + +QENL + Q + Sbjct: 69 GGEMAKTIDKTYIQMKMLNTGKGPAVRALRAQADKELYSKEMRKTVENQENLTLRQTMID 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + V++TTGT LRG I IG LK +G S +L ++ Sbjct: 129 EILVEDGKVVGVRTATHQEYAAKAVIVTTGTALRGEIIIGDLKYSSGPNHSLASINLADN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 + + GR KTGTP R+ +I +D TE Q DE FS+ + + Q+ C +T Sbjct: 189 LKELGLEIGRFKTGTPPRVKASSINYDVTEIQPGDEAPNHFSYTSRDEDYVKDQVPCWLT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +H II N+ + +++G +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG NT+ Sbjct: 249 YTNGTSHEIIQNNLHRAPMFTGVVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRNTE 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE++Q + +I GLE ++R GYAIEYD + P +L TLETKKISGL Sbjct: 309 EVYVQGLSTSLPEDVQRDLVHSIKGLENAEMMRTGYAIEYDMVLPHQLRATLETKKISGL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMIDDL +KG +EP Sbjct: 369 FTAGQTNGTSGYEEAAGQGIIAGINAALKIQGKPELILKRSDGYIGVMIDDLVTKGTIEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G ++G + + R RF +++ L S+ L Sbjct: 429 YRLLTSRAEYRLILRHDNADMRLTEMGREIGLVDDERWARFEIKKNQFDNEMKRLDSIKL 488 Query: 484 ---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQIE 539 N + FK TA EFL P+ S Q++ + I P A +IE ++ E Sbjct: 489 KPVKETNAKVEEMGFKPLTDAVTAKEFLRRPEVSYQDVVAFIGPAAEDLDDKIIELIETE 548 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + M + ++K E++ IP + D+ + +++ E ++K ++ P + QAS+I Sbjct: 549 IKYEGYISKAMDQVAKMKRMEEKRIPANIDWDDIDSIATEARQKFKLINPETIGQASRIS 608 Query: 600 GMTPAALNLLLIYIK 614 G+ PA +++L++Y++ Sbjct: 609 GVNPADISILMVYLE 623 >gi|169833429|ref|YP_001693656.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae Hungary19A-6] gi|205831573|sp|B1I835|MNMG_STRPI RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|168995931|gb|ACA36543.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae Hungary19A-6] Length = 637 Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust. Identities = 259/615 (42%), Positives = 371/615 (60%), Gaps = 6/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DAL Sbjct: 9 YDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + D IQ ++LN KGPAVR R QAD+ELY M++ + +QENL + Q + Sbjct: 69 GGEMAKTIDKTYIQMKMLNTGKGPAVRALRAQADKELYSKEMRKTVENQENLTLRQTMID 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + V++TTGT LRG I IG LK +G S +L ++ Sbjct: 129 EILVEDGKVVGVRTATHQEYAAKAVIVTTGTALRGEIIIGDLKYSSGPNHSLASINLADN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 + + GR KTGTP R+ +I +D TE Q DE FS+ + + Q+ C +T Sbjct: 189 LKELGLEIGRFKTGTPPRVKASSINYDVTEIQPGDEAPNHFSYTSRDEDYVKDQVPCWLT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +H II N+ + +++G +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG NT+ Sbjct: 249 YTNGTSHEIIQNNLHRAPMFTGVVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRNTE 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE++Q + +I GLE ++R GYAIEYD + P +L TLETKKISGL Sbjct: 309 EVYVQGLSTSLPEDVQRDLVHSIKGLENAEMMRTGYAIEYDMVLPHQLRATLETKKISGL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMIDDL +KG +EP Sbjct: 369 FTAGQTNGTSGYEEAAGQGIIAGINAALKIQGKPELILKRSDGYIGVMIDDLVTKGTIEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G ++G + + R RF +++ L S+ L Sbjct: 429 YRLLTSRAEYRLILRHDNADMRLTEMGREIGLVDDERWTRFEIKKNQFDNEMKRLDSIKL 488 Query: 484 ---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQIE 539 N + FK TA EFL P+ S Q++ + I P A +IE ++ E Sbjct: 489 KPVKETNAKVEEMGFKPLTDAVTAKEFLRRPEVSYQDVVAFIGPAAEDLDDKIIELIETE 548 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + M + ++K E++ IP + D+ + +++ E ++K ++ P + QAS+I Sbjct: 549 IKYEGYISKAMDQVAKMKRMEEKRIPANIDWDDIDSIATEARQKFKLINPETIGQASRIS 608 Query: 600 GMTPAALNLLLIYIK 614 G+ PA +++L++Y++ Sbjct: 609 GVNPADISILMVYLE 623 >gi|257124927|ref|YP_003163041.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Leptotrichia buccalis C-1013-b] gi|257048866|gb|ACV38050.1| glucose inhibited division protein A [Leptotrichia buccalis C-1013-b] Length = 640 Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust. Identities = 268/642 (41%), Positives = 398/642 (61%), Gaps = 40/642 (6%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R+YDVIV+G GHAG EAA +A+LG TA+ T IG MSCNP++GG K HL +E+D Sbjct: 2 RNYDVIVVGAGHAGIEAALASARLGLKTAVFTITLDNIGVMSCNPSVGGPAKSHLAKEVD 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G +GR D + +Q R+LN KKGPAVR R QADR++Y M++ I +Q+NLD +Q Sbjct: 62 ALGGEIGRNMDKSFVQMRILNTKKGPAVRSLRAQADRKIYAREMKKTIENQQNLDTVQDI 121 Query: 124 VAGFNTEK------------NIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPA 171 V E+ +I I + VVL TGTFLRG+++IG ++ Sbjct: 122 VTELIVEEIEILEGNSKRIEKVIKGIRTKTGMEFFAKAVVLATGTFLRGLLYIGDKRVKG 181 Query: 172 GRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQ--FADERLIPFSFM 229 GRMG+ ++ L +S F R KTGTP RLD +T+ +K E+Q D IP F Sbjct: 182 GRMGELSADDLTDSLKSLGFKMDRFKTGTPPRLDIRTLNLEKLEEQPGITD---IPLKFS 238 Query: 230 ----TDKITNR-QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVR 284 D++ + Q+ C +TRTN TH+II++N+ + +Y+G I S GPRYCPSIEDK+V+ Sbjct: 239 MRTPNDEVLEKPQLSCYLTRTNETTHKIILDNLDKAPMYNGSISSTGPRYCPSIEDKVVK 298 Query: 285 FGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYD 344 F +++ H +FLEPEG +T VY +G+ST+ P +Q + + TI GLE +I+R GYA+EYD Sbjct: 299 FNDKDSHHLFLEPEGFDTAEVYISGLSTSYPASLQQKIVNTIEGLENAHIMRYGYAVEYD 358 Query: 345 YINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 ++P EL TLET+K+ GL+L+GQ+NGT+GYEEAAAQG++AGIN+A K + R Sbjct: 359 IVDPSELDYTLETRKVKGLYLSGQLNGTSGYEEAAAQGIIAGINAALKIKGQEPFILDRE 418 Query: 405 DSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF 464 SYIG MIDDL +K + EPYRMFT+R+E+R+ LR DNAD RL+ K+G + K++ Sbjct: 419 SSYIGTMIDDLINKELFEPYRMFTARSEFRLILREDNADIRLSEKAYKIGLL----DKKY 474 Query: 465 AKYIQE--YNFLRSL--LKSLVLTSKNLSSTSISFKQDGKTR---TAYEFLSYPDFSIQN 517 +QE N +++ L+++ L S N I K + + T E L P + Q+ Sbjct: 475 YDIVQEKKKNVKKTIENLENIKLGSSNQRLMEILDKYNESLKSGTTLKEILRRPKVTYQD 534 Query: 518 LFSICPDARKFSSLVIE-----RLQIESSYAAYTGRQM-IEAKEIKFEEKRLIPKDFDYS 571 + I +L + ++++++ Y Y + + I K+ K ++K+ IPK+FDY Sbjct: 535 IKYIAEIIENVPNLNFDDETEYQIEVQTKYEGYIAKAIQIMEKQQKLDDKK-IPKNFDYD 593 Query: 572 SLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYI 613 S+ ++ E K++L +P+N+ QAS++ G+TPA +++LL+Y+ Sbjct: 594 SMKGITREAKQRLKENRPYNVGQASRMSGVTPADISVLLMYL 635 >gi|148987862|ref|ZP_01819325.1| glucose-inhibited division protein A [Streptococcus pneumoniae SP6-BS73] gi|147926326|gb|EDK77399.1| glucose-inhibited division protein A [Streptococcus pneumoniae SP6-BS73] Length = 637 Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust. Identities = 259/615 (42%), Positives = 371/615 (60%), Gaps = 6/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DAL Sbjct: 9 YDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + D IQ ++LN KGPAVR R QAD+ELY M++ + +QENL + Q + Sbjct: 69 GGEMAKTIDKTYIQMKMLNTGKGPAVRALRAQADKELYSKEMRKTVENQENLTLRQTMID 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + V++TTGT LRG I IG LK +G S +L ++ Sbjct: 129 EILVEDGKVVGVRTATHQEYAAKAVIVTTGTALRGEIIIGDLKYSSGPNHSLASINLADN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 + + GR KTGTP R+ +I +D TE Q DE FS+ + + Q+ C +T Sbjct: 189 LKELGLEIGRFKTGTPPRVKASSINYDVTEIQPGDEAPNHFSYTSRDEDYVKDQVPCWLT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +H II N+ + +++G +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG NT+ Sbjct: 249 YTNGTSHEIIQNNLHRAPMFTGVVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRNTE 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE++Q + +I GLE ++R GYAIEYD + P +L TLETKKISGL Sbjct: 309 EVYVQGLSTSLPEDVQRDLVHSIKGLENAEMMRTGYAIEYDMVLPHQLRATLETKKISGL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMIDDL +KG +EP Sbjct: 369 FTAGQTNGTSGYEEAAGQGIIAGINAALKIQGRPELILKRSDGYIGVMIDDLVTKGTIEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G ++G + + R RF +++ L S+ L Sbjct: 429 YRLLTSRAEYRLILRHDNADMRLTEMGREIGLVDDERWARFEIKKNQFDNEMKRLGSIKL 488 Query: 484 ---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQIE 539 N + FK TA EFL P+ S Q++ + I P A +IE ++ E Sbjct: 489 KPVKETNAKVEEMGFKPLTDAVTAKEFLRRPEVSYQDVVAFIGPAAEDLDDKIIELIETE 548 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + M + ++K E++ IP + D+ + +++ E ++K ++ P + QAS+I Sbjct: 549 IKYEGYISKAMDQVAKMKRMEEKRIPANIDWDDIDSIATEARQKFKLINPETIGQASRIS 608 Query: 600 GMTPAALNLLLIYIK 614 G+ PA +++L++Y++ Sbjct: 609 GVNPADISILMVYLE 623 >gi|148992710|ref|ZP_01822353.1| glucose-inhibited division protein A [Streptococcus pneumoniae SP9-BS68] gi|168489389|ref|ZP_02713588.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae SP195] gi|194397114|ref|YP_002036840.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae G54] gi|225853751|ref|YP_002735263.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae JJA] gi|303255167|ref|ZP_07341243.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae BS455] gi|303259177|ref|ZP_07345155.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae SP-BS293] gi|303260934|ref|ZP_07346883.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae SP14-BS292] gi|303263260|ref|ZP_07349183.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae BS397] gi|303265425|ref|ZP_07351325.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae BS457] gi|303269622|ref|ZP_07355381.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae BS458] gi|307126355|ref|YP_003878386.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae 670-6B] gi|147928436|gb|EDK79451.1| glucose-inhibited division protein A [Streptococcus pneumoniae SP9-BS68] gi|183572125|gb|EDT92653.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae SP195] gi|194356781|gb|ACF55229.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA (glucose-inhibited division protein A) [Streptococcus pneumoniae G54] gi|225722589|gb|ACO18442.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae JJA] gi|301801086|emb|CBW33754.1| glucose inhibited division protein A [Streptococcus pneumoniae INV200] gi|302597997|gb|EFL65067.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae BS455] gi|302637771|gb|EFL68257.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae SP14-BS292] gi|302639595|gb|EFL70052.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae SP-BS293] gi|302640824|gb|EFL71212.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae BS458] gi|302644865|gb|EFL75112.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae BS457] gi|302647033|gb|EFL77257.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae BS397] gi|306483417|gb|ADM90286.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae 670-6B] gi|332075802|gb|EGI86269.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae GA17570] gi|332077434|gb|EGI87895.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae GA41301] Length = 637 Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust. Identities = 259/615 (42%), Positives = 371/615 (60%), Gaps = 6/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DAL Sbjct: 9 YDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + D IQ ++LN KGPAVR R QAD+ELY M++ + +QENL + Q + Sbjct: 69 GGEMAKTIDKTYIQMKMLNTGKGPAVRALRAQADKELYSKEMRKTVENQENLTLRQTMID 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + V++TTGT LRG I IG LK +G S +L ++ Sbjct: 129 EILVEDGKVVGVRTATHQEYAAKAVIVTTGTALRGEIIIGDLKYSSGPNHSLASINLADN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 + + GR KTGTP R+ +I +D TE Q DE FS+ + + Q+ C +T Sbjct: 189 LKELGLEIGRFKTGTPPRVKASSINYDVTEIQPGDEAPNHFSYTSRDEDYVKDQVPCWLT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +H II N+ + +++G +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG NT+ Sbjct: 249 YTNGTSHEIIQNNLHRAPMFTGVVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRNTE 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE++Q + +I GLE ++R GYAIEYD + P +L TLETKKISGL Sbjct: 309 EVYVQGLSTSLPEDVQRDLVHSIKGLENAEMMRTGYAIEYDMVLPHQLRATLETKKISGL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMIDDL +KG +EP Sbjct: 369 FTAGQTNGTSGYEEAAGQGIIAGINAALKIQGKPELILKRSDGYIGVMIDDLVTKGTIEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G ++G + + R RF +++ L S+ L Sbjct: 429 YRLLTSRAEYRLILRHDNADMRLTEMGREIGLVDDERWARFEIKKNQFDNEMKRLDSIKL 488 Query: 484 ---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQIE 539 N + FK TA EFL P+ S Q++ + I P A +IE ++ E Sbjct: 489 KPVKETNAKVEEMGFKPLTDAVTAKEFLRRPEVSYQDVVAFIGPAAEDLDDKIIELIETE 548 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + M + ++K E++ IP + D+ + +++ E ++K ++ P + QAS+I Sbjct: 549 IKYEGYISKAMDQVAKMKRMEEKRIPANIDWDDIDSIATEARQKFKLINPETIGQASRIS 608 Query: 600 GMTPAALNLLLIYIK 614 G+ PA +++L++Y++ Sbjct: 609 GVNPADISILMVYLE 623 >gi|16331425|ref|NP_442153.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Synechocystis sp. PCC 6803] gi|2494736|sp|Q55694|MNMG_SYNY3 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|1001595|dbj|BAA10223.1| glucose inhibited division protein A [Synechocystis sp. PCC 6803] Length = 635 Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust. Identities = 267/636 (41%), Positives = 377/636 (59%), Gaps = 47/636 (7%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVIV+G GHAGCEAA A+LG T L+T I CNPA+GG K L E+DA Sbjct: 12 QFDVIVVGAGHAGCEAALATARLGCRTLLLTLNLDRIAWQPCNPAVGGPAKSQLTHEVDA 71 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G +G++AD +Q RVLN+ +GPAV R Q D+ Y M+ + +Q NL + +G Sbjct: 72 LGGEIGKMADRTYLQKRVLNISRGPAVWALRAQTDKREYAAVMKNIVENQPNLSIREG-- 129 Query: 125 AGFNTEKNIISSIVMQDNSMIR-----------CSTVVLTTGTFLRGVIHIGKLKIPAGR 173 +++ +V+ DN I+ +VV+TTGTFL G I IG +PAGR Sbjct: 130 --------MVTDLVLGDNDEIQGVQTYFGACFGAQSVVITTGTFLGGKIWIGNKSMPAGR 181 Query: 174 MGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI 233 G+ + L + + F+TGRLKTGTPAR+D +++ +DK E Q DE++ FSF + Sbjct: 182 AGEFAAVGLTETLNELGFETGRLKTGTPARVDRRSVDYDKLEPQPPDEQVSWFSFDPEVW 241 Query: 234 TNR-QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQ 292 R Q+ C +TRT +TH++I +N+ S IY G I S GPRYCPSIEDKIVRF ++ HQ Sbjct: 242 VEREQMNCYLTRTTAKTHQLIKDNLHLSPIYGGFIDSKGPRYCPSIEDKIVRFADKESHQ 301 Query: 293 IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF 352 IF+EPEG + +Y G ST LPE +Q ++T+PGLE ++RP YA+EYD++ + + Sbjct: 302 IFIEPEGRDIPELYIQGFSTGLPENVQLAMLQTLPGLENCVMLRPAYAVEYDFLPATQCY 361 Query: 353 PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMI 412 P+L TKK++GLF AGQINGTTGYEEAAAQGLVAGIN+AR I FSR SY+G +I Sbjct: 362 PSLMTKKVAGLFCAGQINGTTGYEEAAAQGLVAGINAARHCQGKSLIIFSREGSYLGTLI 421 Query: 413 DDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYN 472 DDL +K + EPYRM TSR+EYR+ LR DNAD RLTP+G ++G I +RR ++ Sbjct: 422 DDLCTKDLREPYRMLTSRSEYRLILRSDNADQRLTPLGREIGLIDDRR----------WD 471 Query: 473 FLRSLLKSLVLTSKNLSSTSISFKQD--GKTRTAY------------EFLSYPDFSIQNL 518 ++ ++ + L ST I +QD GK Y E L P F +L Sbjct: 472 LFQTKQANITAEKERLYSTRIK-EQDAVGKEIVDYTQQKIKGSIVLAELLRRPGFHYPDL 530 Query: 519 FSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSN 578 + ++IE Y+ Y RQ + +++ ++ +P +Y ++ LS Sbjct: 531 EKFQLGNEELKPEEKTSVEIEIKYSGYIKRQQTQIEQVSRHSQKRLPPGLNYMAIETLSM 590 Query: 579 ELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIK 614 E +EKL+ +P + QA +I G+ PA +N LL+Y++ Sbjct: 591 EAREKLTQFQPLTIGQAGRIGGVNPADINALLVYLE 626 >gi|68476591|ref|XP_717588.1| potential mitochondrial tRNA modification protein [Candida albicans SC5314] gi|68476740|ref|XP_717515.1| potential mitochondrial tRNA modification protein [Candida albicans SC5314] gi|46439229|gb|EAK98549.1| potential mitochondrial tRNA modification protein [Candida albicans SC5314] gi|46439305|gb|EAK98624.1| potential mitochondrial tRNA modification protein [Candida albicans SC5314] Length = 695 Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust. Identities = 262/632 (41%), Positives = 387/632 (61%), Gaps = 30/632 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 + VIVIGGGHAGCEAA +A+ T LIT + IG+ SCNP++GG+GKG L+RE+DAL Sbjct: 38 HPVIVIGGGHAGCEAATGSARSQTPTTLITPYINKIGTASCNPSMGGVGKGTLLREVDAL 97 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DG+ R+ D AGI FR+LN +G AV GPR Q DR++Y MQ+EIL+ NL V++ +V Sbjct: 98 DGVSARITDKAGIHFRILNASRGAAVHGPRAQIDRKIYLEEMQKEILNYPNLKVLEAQVE 157 Query: 126 GF-------------NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAG 172 E + +++ D +++ VV+TTGTFL G IHIG P+G Sbjct: 158 DIIIKPVLSNGEDFSGREFGEVKGVILSDGRVLKSEKVVVTTGTFLGGEIHIGLKCFPSG 217 Query: 173 RMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK 232 RMG+ + L + + F GRLKTGTP RL +TI + +Q +D P S+M DK Sbjct: 218 RMGEDATFGLSKTLKQAGFRLGRLKTGTPPRLSSRTINFKGLIEQPSDFPPQPMSYMNDK 277 Query: 233 I--TNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNG 290 + ++ ++C T+TN E H+II +N+ S +K GPRYCPSIE K+++F ++ Sbjct: 278 VYLEDQLMKCYQTKTNPEFHKIIADNLDKSIHIRETVK--GPRYCPSIESKVIKFPHKDY 335 Query: 291 HQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKE 350 H ++LEPEGL++D++YPNGIS +PEEIQ + +R +PG E V + +PGY +EYD+I+P+E Sbjct: 336 HYVWLEPEGLDSDLIYPNGISCTMPEEIQEKLVRLMPGCENVTMTQPGYGVEYDFIDPRE 395 Query: 351 LFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGV 410 L TLETK ++GL+LAGQINGTTGYEEAAAQG +AGIN+ + + R D + + Sbjct: 396 LKSTLETKLVNGLYLAGQINGTTGYEEAAAQGCIAGINAGLSYLQKPLLELKRPDGLVAI 455 Query: 411 MIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQE 470 +IDDL +KGV EPYRMFTSR+E+R S+R DNAD+RLT G +LG + E R + F K + Sbjct: 456 LIDDLITKGVEEPYRMFTSRSEFRFSIRSDNADDRLTQKGYELGVVSEERYQFFKKEADQ 515 Query: 471 YNFLRSLLKSLVLTSKNLSSTSISFKQDGKTR---TAYEFLSYPDFSIQNLF-------- 519 + +++ L L L+ K + K D + + ++ LSYP SI ++ Sbjct: 516 FKDIKNALSVLKLSGKQWAPGLQGLKTDTRENDKVSGWKLLSYPGVSINDILPHMSHFMT 575 Query: 520 SICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPAL--S 577 + P + S + ++ + S Y R+ + + +P++F Y + +L S Sbjct: 576 QVPPCLQNVSMRLQNKIDVVSDYDPIMYREKANLNTFESLDMYKLPQNFTYDNSGSLKIS 635 Query: 578 NELKEKLSILKPFNLLQASKIEGMTPAALNLL 609 +E+ L+I++P + QA ++G+TP A+N L Sbjct: 636 HEVCTILNIVQPTTIGQAQSLQGITPTAINEL 667 >gi|270291930|ref|ZP_06198145.1| glucose-inhibited division protein A [Streptococcus sp. M143] gi|270279458|gb|EFA25300.1| glucose-inhibited division protein A [Streptococcus sp. M143] Length = 637 Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust. Identities = 259/615 (42%), Positives = 371/615 (60%), Gaps = 6/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DAL Sbjct: 9 YDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + D IQ ++LN KGPAVR R QAD+ELY M++ + +QENL + Q + Sbjct: 69 GGEMAKTIDKTYIQMKMLNTGKGPAVRALRAQADKELYSKEMRKTVENQENLTLRQTMID 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + V++TTGT LRG I IG LK +G S +L ++ Sbjct: 129 EILVEDGRVVGVRTATHQEYAAKAVIVTTGTALRGEIIIGDLKYSSGPNHSLASINLADN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 + + GR KTGTP R+ +I +D TE Q DE FS+ + + Q+ C +T Sbjct: 189 LKELGLEIGRFKTGTPPRVKASSINYDVTEIQPGDEAPNHFSYTSRDEDYVKDQVPCWLT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +H II N+ + +++G +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG NT+ Sbjct: 249 YTNGTSHEIIQNNLHRAPMFTGVVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRNTE 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE++Q + +I GLE ++R GYAIEYD + P +L TLETKKISGL Sbjct: 309 EVYVQGLSTSLPEDVQRDLVHSIKGLENAEMMRTGYAIEYDMVLPHQLRATLETKKISGL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMIDDL +KG +EP Sbjct: 369 FTAGQTNGTSGYEEAAGQGIIAGINAALKIQGKPELILKRSDGYIGVMIDDLVTKGTIEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G ++G + + R RF +++ L S+ L Sbjct: 429 YRLLTSRAEYRLILRHDNADMRLTEMGREIGLVDDERWARFEIKKNQFDNEMKRLDSIKL 488 Query: 484 ---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQIE 539 N + FK TA EFL P+ S Q++ + I P A +IE ++ E Sbjct: 489 KPVKETNAKVEEMGFKPLTDAVTAKEFLRRPEVSYQDVVAFIGPAAEDLDDKIIELIETE 548 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + M + ++K E++ IP + D+ + +++ E ++K ++ P + QAS+I Sbjct: 549 IKYEGYISKAMDQVAKMKRMEEKRIPANIDWDDIDSIATEARQKFKLINPETIGQASRIS 608 Query: 600 GMTPAALNLLLIYIK 614 G+ PA +++L++Y++ Sbjct: 609 GVNPADISILMVYLE 623 >gi|239624143|ref|ZP_04667174.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239520529|gb|EEQ60395.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 625 Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust. Identities = 262/622 (42%), Positives = 383/622 (61%), Gaps = 11/622 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +YD+IV+G GHAGCEAA A+LG T + T +I M CNP +GG KGHLVRE Sbjct: 4 LEETYDMIVVGAGHAGCEAALAGARLGLETIMFTVSVDSIALMPCNPNVGGSSKGHLVRE 63 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DAL G MG+ D IQ ++LN KGPAV R QAD++ Y M+R + + ++L + Q Sbjct: 64 LDALGGEMGKNIDKTFIQSKMLNESKGPAVHSLRAQADKQDYSRQMRRTLENTDHLTIRQ 123 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 EV+ ++ I + ++ R V+L TGT+L+ G + P G G +N Sbjct: 124 AEVSELVVQEGEIRGVKTFSGAVYRGKCVILCTGTYLKARCIYGDVSNPTGPNGLQAANH 183 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KITNRQIE 239 L +S + R KTGTPAR+D ++I + K E+Q DE ++PFSF TD + Q+ Sbjct: 184 LTDSLKANGIEMFRFKTGTPARVDKRSIDFTKMEEQLGDEHVVPFSFSTDPESVQKDQVS 243 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +T TN TH II N+ S ++SG I+ GPRYCPSIEDK+V+F ++ HQ+F+EPEG Sbjct: 244 CWLTYTNEGTHDIIRRNLDRSPLFSGAIEGTGPRYCPSIEDKVVKFPDKERHQVFVEPEG 303 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T+ +Y G+S++LPE++Q+ RT+PGLEKV I+R YAIEYD IN +L PTLE KK Sbjct: 304 LYTNEMYLGGMSSSLPEDVQYAMYRTVPGLEKVKIVRNAYAIEYDCINSLQLKPTLEFKK 363 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 ISGLF GQ NG++GYEEAA QG +AG+N+A K D + R+ +YIGV+IDDL +K Sbjct: 364 ISGLFAGGQFNGSSGYEEAAVQGFMAGVNAAMKIMGRDQVVLDRSQAYIGVLIDDLVTKE 423 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRM TSRAEYR+ LR DNAD RL IG ++G + + + K + + + + +K Sbjct: 424 NHEPYRMMTSRAEYRLLLRQDNADIRLRKIGHEIGLVSD---GEYEKLLIKMDEIEHEIK 480 Query: 480 SLVLTSKNLSSTSISF-KQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVI 533 L T ++S + F ++ G T T E + P+ + L+ + + S V Sbjct: 481 RLQGTVIGVNSMAQEFLEKYGSTPLKSGVTLAELVKRPELDYEKLWELDERRPELSPEVR 540 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E++ IE Y Y RQ + ++ K E +L+P+DFDY+ + +L E +KL+ ++P + Sbjct: 541 EQVNIEIKYEGYIKRQYQQVEQYKKLEGKLLPEDFDYTQVKSLRREAVQKLNKVQPATIG 600 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I G++PA +++LL++ + Sbjct: 601 QASRISGVSPADISVLLVHFAR 622 >gi|19747019|ref|NP_608155.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pyogenes MGAS8232] gi|24636866|sp|Q8NZ02|MNMG_STRP8 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|19749277|gb|AAL98654.1| glucose inhibited division protein [Streptococcus pyogenes MGAS8232] Length = 632 Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust. Identities = 269/618 (43%), Positives = 373/618 (60%), Gaps = 6/618 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAG EA+ +++G T L T + M CNP+IGG KG +VREIDA Sbjct: 8 SYDVIVIGAGHAGVEASLATSRMGCKTLLATINLDMLAFMPCNPSIGGSAKGIVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M + D IQ ++LN KGPAVR R QAD+ LY M+ + Q NL + Q + Sbjct: 68 LGGEMSKNIDKTYIQMKMLNTGKGPAVRALRAQADKSLYAREMKHTVEKQANLTLRQTMI 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ VV+TTGT LRG I +G+LK +G S +L + Sbjct: 128 DDILVEDGRVVGVLTATGQKFAAKAVVVTTGTALRGEIILGELKYSSGPNNSLASVTLAD 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--NRQIECGI 242 + K + GR KTGTP R+ +I +D+TE Q D++ FSFM+ QI C + Sbjct: 188 NLKKLGLEIGRFKTGTPPRVKASSINYDQTEIQPGDDKPNHFSFMSKDADYLKDQIPCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +H II +N+ + ++SG +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG +T Sbjct: 248 TYTNQTSHDIINQNLYRAPMFSGIVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRDT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q I +I GLEK ++R GYAIEYD + P +L TLETK ISG Sbjct: 308 EEVYVQGLSTSLPEDVQKDLIHSIKGLEKAEMMRTGYAIEYDIVLPHQLRATLETKLISG 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQ NGT+GYEEAA QGL+AGIN+A K + R+D+YIGVMIDDL +KG LE Sbjct: 368 LFTAGQTNGTSGYEEAAGQGLIAGINAALKVQGKPELILKRSDAYIGVMIDDLVTKGTLE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFA-KYIQEYNFLRSL--LK 479 PYR+ TSRAEYR+ LR DNAD RLT IG +G + + R K F K Q N L+ L +K Sbjct: 428 PYRLLTSRAEYRLILRHDNADMRLTEIGRDIGLVDDERWKAFEIKKNQFDNELKRLNSIK 487 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQI 538 + + N + FK TA EF+ P+ S + P A + +IE L+ Sbjct: 488 LKPVKATNDRVQELGFKPLTDAMTAKEFMRRPEIDYATAVSFVGPAAEDLDAKIIELLET 547 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E Y Y + + + ++K E++ IP + D+ ++ +++ E ++K + P + QAS+I Sbjct: 548 EIKYEGYIRKALDQVAKMKRMEEKRIPANIDWDAIDSIATEARQKFKKINPETIGQASRI 607 Query: 599 EGMTPAALNLLLIYIKKN 616 G+ PA +++L+IY++ N Sbjct: 608 SGVNPADISILMIYLEGN 625 >gi|257885580|ref|ZP_05665233.1| glucose-inhibited division protein A [Enterococcus faecium 1,231,501] gi|257821436|gb|EEV48566.1| glucose-inhibited division protein A [Enterococcus faecium 1,231,501] Length = 633 Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust. Identities = 268/621 (43%), Positives = 382/621 (61%), Gaps = 9/621 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAG EAA AA++G+ T L+T + M CNP++GG KG +VREIDA Sbjct: 8 AYDVIVVGAGHAGSEAALAAARMGSKTLLLTINLDMVAFMPCNPSVGGPAKGVVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ R+LN KGPAVR R QAD+ Y M+ I + NL + QG V Sbjct: 68 LGGEMGKNIDKTYIQMRMLNTGKGPAVRALRAQADKHAYSTEMKHTIEKEPNLTLRQGIV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + +V + R VV+T GT LRG I IG+LK +G PS L N Sbjct: 128 EELIVEDGVCHGVVTSTGASYRAKAVVITAGTALRGEIIIGELKYSSGPNNSQPSIGLAN 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR--QIECGI 242 + F R KTGTP R+ TI + TE+Q D+ FSF T + Q C + Sbjct: 188 HLKELGFAIERFKTGTPPRVKSSTIDYSVTEEQPGDKEPNHFSFSTPDSAYKLDQESCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T T +TH+II +N+ + +++G ++ G RYCPSIEDKIVRF ++ HQ+FLEPEGLNT Sbjct: 248 TYTGEKTHQIIRDNLHRAPMFTGIVEGVGARYCPSIEDKIVRFADKPRHQLFLEPEGLNT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q + +I GLEKV ++R GYAIEYD + P +L PTLETK + Sbjct: 308 EEVYVQGLSTSLPEDVQVNMLHSIAGLEKVEMMRTGYAIEYDVVEPHQLRPTLETKVVEN 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQ NGT+GYEEAA QGL+AGIN+A K + + R+D YIGVMIDDL +KG E Sbjct: 368 LYTAGQTNGTSGYEEAAGQGLIAGINAALKVQGKEPLVIKRSDGYIGVMIDDLVTKGTNE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAK----YIQEYNFLRSL- 477 PYR+ TSRAEYR+ LR DNAD RLT +G ++G + E + K + K QE L ++ Sbjct: 428 PYRLLTSRAEYRLLLRHDNADLRLTEMGHRVGLVKEDQYKNYLKKKEAVEQEIKRLMNVR 487 Query: 478 LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 +K L++ + + +DG A +FL P+ + +L P+ + + IE+++ Sbjct: 488 IKPTEEVQDFLATINAAPLKDGV--LASDFLRRPEITYADLLRFIPENEELTRKEIEQVE 545 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ Y Y + M + +++K E + IP++ DY+++ L+ E K+KL ++P + QAS+ Sbjct: 546 IQIKYEGYIKKAMEKVEKLKRMEAKKIPENIDYAAINGLATEAKQKLQKIQPETIAQASR 605 Query: 598 IEGMTPAALNLLLIYIKKNTV 618 I G+ PA L++L++YI++ + Sbjct: 606 ISGVNPADLSILMVYIEQGKI 626 >gi|307711097|ref|ZP_07647519.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus mitis SK321] gi|307617059|gb|EFN96237.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus mitis SK321] Length = 637 Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust. Identities = 261/615 (42%), Positives = 373/615 (60%), Gaps = 6/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DAL Sbjct: 9 YDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + D IQ ++LN KGPAVR R QAD+ELY M++ + +QENL + Q + Sbjct: 69 GGEMAKTIDKTYIQMKMLNTGKGPAVRALRAQADKELYSKEMRKTVENQENLTLRQTMID 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + V++TTGT LRG I IG LK +G S +L ++ Sbjct: 129 EILVEDGKVVGVRTATHQEYAAKAVIVTTGTALRGEIIIGDLKYSSGPNHSLASINLADN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 + + GR KTGTP R+ +I +D TE Q DE FS+ + + Q+ C +T Sbjct: 189 LKELGLEIGRFKTGTPPRVKASSINYDVTEIQPGDEAPNHFSYTSRDEDYVKDQVPCWLT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +H II N+ + +++G +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG NT+ Sbjct: 249 YTNGTSHEIIQNNLHRAPMFTGVVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRNTE 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE++Q + +I GLE ++R GYAIEYD + P +L TLETKKISGL Sbjct: 309 EVYVQGLSTSLPEDVQRDLVHSIKGLENAEMMRTGYAIEYDMVLPHQLRATLETKKISGL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMIDDL +KG +EP Sbjct: 369 FTAGQTNGTSGYEEAAGQGIIAGINAALKIQGKPELILKRSDGYIGVMIDDLVTKGTIEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFA-KYIQEYNFLRSL--LKS 480 YR+ TSRAEYR+ LR DNAD RLT +G ++G + + R RF K Q N ++ L +K Sbjct: 429 YRLLTSRAEYRLILRHDNADMRLTEMGREIGLVDDERWARFEIKKNQFENEMKRLDSIKL 488 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQIE 539 + N + FK TA EFL P+ S Q++ + I P A +IE ++ E Sbjct: 489 KPVKETNAKVEEMGFKPLTDAVTAKEFLRRPEVSYQDVVAFIGPAAEDLDDKIIELIETE 548 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + M + ++K E++ IP + D+ + +++ E ++K ++ P + QAS+I Sbjct: 549 IKYEGYISKAMDQVAKMKRMEEKRIPANIDWDDIDSIATEARQKFKLINPETIGQASRIS 608 Query: 600 GMTPAALNLLLIYIK 614 G+ PA +++L++Y++ Sbjct: 609 GVNPADISILMVYLE 623 >gi|225858000|ref|YP_002739510.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae 70585] gi|225720746|gb|ACO16600.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae 70585] Length = 637 Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust. Identities = 261/615 (42%), Positives = 373/615 (60%), Gaps = 6/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DAL Sbjct: 9 YDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + D IQ ++LN KGPAVR R QAD+ELY M++ + +QENL + Q + Sbjct: 69 GGEMAKTIDKTYIQMKMLNTGKGPAVRALRAQADKELYSKEMRKTVENQENLTLRQTMID 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + V++TTGT LRG I IG LK +G S +L ++ Sbjct: 129 EILVEDGKVVGVRTATHQEYAAKAVIVTTGTALRGEIIIGDLKYSSGPNHSLASINLADN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 + + GR KTGTP R+ +I +D TE Q DE FS+ + + Q+ C +T Sbjct: 189 LKELGLEIGRFKTGTPPRVKASSINYDVTEIQPGDEAPNHFSYTSRDEDYVKDQVPCWLT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +H II N+ + +++G +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG NT+ Sbjct: 249 YTNGTSHEIIQNNLHRAPMFTGVVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRNTE 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE++Q + +I GLE ++R GYAIEYD + P +L TLETKKISGL Sbjct: 309 EVYVQGLSTSLPEDVQRDLVHSIKGLENAEMMRTGYAIEYDMVLPHQLRATLETKKISGL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMIDDL +KG +EP Sbjct: 369 FTAGQTNGTSGYEEAAGQGIIAGINAALKIQGKPELILKRSDGYIGVMIDDLVTKGTIEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFA-KYIQEYNFLRSL--LKS 480 YR+ TSRAEYR+ LR DNAD RLT +G ++G + + R RF K Q N ++ L +K Sbjct: 429 YRLLTSRAEYRLILRHDNADMRLTEMGREIGLVDDERWARFEIKKNQFENEMKRLDSIKL 488 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQIE 539 + N + FK TA EFL P+ S Q++ + I P A +IE ++ E Sbjct: 489 KPVKETNAKVEEMGFKPLTDAVTAKEFLRRPEVSYQDVVAFIGPAAEDLDDKIIELIETE 548 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + M + ++K E++ IP + D+ + +++ E ++K ++ P + QAS+I Sbjct: 549 IKYEGYISKAMDQVAKMKRMEEKRIPANIDWDDIDSIATEARQKFKLINPETIGQASRIS 608 Query: 600 GMTPAALNLLLIYIK 614 G+ PA +++L++Y++ Sbjct: 609 GVNPADISILMVYLE 623 >gi|183227703|ref|NP_001116698.1| protein MTO1 homolog, mitochondrial isoform c [Homo sapiens] Length = 732 Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust. Identities = 285/670 (42%), Positives = 406/670 (60%), Gaps = 65/670 (9%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA+ G+ T L+TH+ TIG MSCNP+ GG+GKGHL+RE+DAL Sbjct: 37 FDVIVIGGGHAGTEAATAAARCGSRTLLLTHRVDTIGQMSCNPSFGGIGKGHLMREVDAL 96 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGL R+ D +G+ ++VLN +KGPAV G R Q DR+LY+ MQ+EIL+ L V +G V Sbjct: 97 DGLCSRICDQSGVHYKVLNRRKGPAVWGLRAQIDRKLYKQNMQKEILNTPLLTVQEGAVE 156 Query: 126 GF--------NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 +T K +S +V+ D S + +V+LTTGTFLRG+I IG PAGR+GD Sbjct: 157 DLILTEPEPEHTGKCRVSGVVLVDGSTVYAESVILTTGTFLRGMIVIGLETHPAGRLGDQ 216 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR- 236 PS L + K F GRLKTGTP R+ ++I + K D IPFSF + + + Sbjct: 217 PSIGLAQTLEKLGFVVGRLKTGTPPRIAKESINFSILNKHIPDNPSIPFSFTNETVWIKP 276 Query: 237 --QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 Q+ C +T TN I+++N+ ++ + GPRYCPSIE K++RF R HQ++ Sbjct: 277 EDQLPCYLTHTNPRVDEIVLKNLHLNSHVKETTR--GPRYCPSIESKVLRFPNRL-HQVW 333 Query: 295 LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT 354 LEPEG+++D++YP G+S LP E+Q + I I GLEK +I+PGY ++YDY++P+++ P+ Sbjct: 334 LEPEGMDSDLIYPQGLSMTLPAELQEKMITCIRGLEKAKVIQPGYGVQYDYLDPRQITPS 393 Query: 355 LETKKISGLFLAGQINGTTGYEEAAA---------------------------------- 380 LET + LF AGQINGTTGYEEAAA Sbjct: 394 LETHLVQRLFFAGQINGTTGYEEAAAQTECCSVARLECSDMISQLQAILLPQPSLVAGTA 453 Query: 381 ------QGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYR 434 QG++AGIN++ + ++ SRT+ YIGV+IDDLT+ G EPYRMFTSR E+R Sbjct: 454 GMHHNTQGVIAGINASLRVSRKPPFVVSRTEGYIGVLIDDLTTLGTSEPYRMFTSRVEFR 513 Query: 435 ISLRPDNADNRLTPIGMK-LGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS----KNLS 489 +SLRPDNAD+RLT G K GC+ ++R +R S+LKS+ S K + Sbjct: 514 LSLRPDNADSRLTLRGYKDAGCVSQQRYERACWMKSSLEEGISVLKSIEFLSSKWKKLIP 573 Query: 490 STSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA-RKFSSL--VIERLQIESSYAAYT 546 SIS + R A + L Y + + +L P+ +K++ + ERL+IE++Y + Sbjct: 574 EASISTSRSLPVR-ALDVLKYEEVDMDSLAKAVPEPLKKYTKCRELAERLKIEATYESVL 632 Query: 547 GRQMIEAKEIKFEEKRLIPKDFDYSSLP--ALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Q+ E K ++ +E +PKD DY ++ +LS+E++EKL +P + AS+I G+TPA Sbjct: 633 FHQLQEIKGVQQDEALQLPKDLDYLTIRDVSLSHEVREKLHFSRPQTIGAASRIPGVTPA 692 Query: 605 ALNLLLIYIK 614 A+ LL ++K Sbjct: 693 AIINLLRFVK 702 >gi|256761832|ref|ZP_05502412.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis T3] gi|256683083|gb|EEU22778.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis T3] Length = 632 Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust. Identities = 272/625 (43%), Positives = 384/625 (61%), Gaps = 16/625 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+G GHAG EAA AA++G T L+T + M CNP++GG KG +VREIDA Sbjct: 8 SYDVIVVGAGHAGSEAALAAARMGVKTLLLTINLDMVAFMPCNPSVGGPAKGVVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ R+LN KGPAVR R QAD+ Y M+ I +ENL + QG V Sbjct: 68 LGGEMGKNIDKTYIQMRMLNTGKGPAVRALRAQADKHAYATEMKHTIEKEENLTLRQGIV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + +V + R VV+T GT LRG I IG+LK +G PS L N Sbjct: 128 EELIVEDGVCRGVVTSTGAAYRSQAVVITAGTALRGEIIIGELKYSSGPNNSQPSVGLAN 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNRQIE-CGI 242 + + R KTGTP R+ TI + TE+Q D+ FS+ T D N+ E C + Sbjct: 188 HLKELGLEIDRFKTGTPPRVKSSTIDYSVTEEQPGDKEPNHFSYSTPDSAYNQNQEPCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II +N+ + +++G ++ G RYCPSIEDKIVRF ++ HQ+FLEPEGLNT Sbjct: 248 TYTNETTHEIIQKNLHRAPMFTGIVEGVGARYCPSIEDKIVRFADKPRHQLFLEPEGLNT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q Q + +I GLEKV ++R GYAIEYD + P +L PTLETK I Sbjct: 308 EEVYVQGLSTSLPEDVQTQMLHSIEGLEKVEMMRTGYAIEYDVVVPHQLRPTLETKVIEN 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQ NGT+GYEEAA QGL+AGIN+A K + + R+D YIGVMIDDL +KG E Sbjct: 368 LYTAGQTNGTSGYEEAAGQGLMAGINAALKIQGKEPLVLKRSDGYIGVMIDDLVTKGTNE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRS----LL 478 PYR+ TSRAEYR+ LR DNAD RLT +G ++G + +++++A Y+ + + + L Sbjct: 428 PYRLLTSRAEYRLILRHDNADLRLTEMGHEIGLV---KEEQYAAYLVKKAAVEAEIARLG 484 Query: 479 KSLVLTSKN----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARK-FSSLVI 533 K + +K L + + +DG A +FL P+ S Q + P + VI Sbjct: 485 KHRIKPTKEVQAFLETKGAAGLKDGI--LARDFLKRPEISYQEVAQFIPAPEEALDPKVI 542 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I+ Y Y + M + +++K E + IP++ DY ++ L+ E K+KL ++P + Sbjct: 543 EQVEIQIKYEGYIKKAMEKVEKLKRMEAKRIPENIDYQAINGLATEAKQKLQKIQPETIA 602 Query: 594 QASKIEGMTPAALNLLLIYIKKNTV 618 QAS+I G+ PA +++L++YI++ + Sbjct: 603 QASRISGVNPADISILMVYIEQGKI 627 >gi|15900062|ref|NP_344666.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae TIGR4] gi|111656984|ref|ZP_01407792.1| hypothetical protein SpneT_02001786 [Streptococcus pneumoniae TIGR4] gi|148983524|ref|ZP_01816843.1| glucose-inhibited division protein A [Streptococcus pneumoniae SP3-BS71] gi|148996544|ref|ZP_01824262.1| glucose-inhibited division protein A [Streptococcus pneumoniae SP11-BS70] gi|149001778|ref|ZP_01826751.1| glucose-inhibited division protein A [Streptococcus pneumoniae SP14-BS69] gi|168576443|ref|ZP_02722326.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae MLV-016] gi|225855908|ref|YP_002737419.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae P1031] gi|225860168|ref|YP_002741677.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae Taiwan19F-14] gi|237649788|ref|ZP_04524040.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae CCRI 1974] gi|237821486|ref|ZP_04597331.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae CCRI 1974M2] gi|298229172|ref|ZP_06962853.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255777|ref|ZP_06979363.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae str. Canada MDR_19A] gi|298501930|ref|YP_003723870.1| glucose-inhibited division protein A [Streptococcus pneumoniae TCH8431/19A] gi|307066806|ref|YP_003875772.1| NAD/FAD-utilizing enzyme apparently involved in cell division [Streptococcus pneumoniae AP200] gi|21263676|sp|Q97T36|MNMG_STRPN RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|14971587|gb|AAK74306.1| glucose-inhibited division protein A [Streptococcus pneumoniae TIGR4] gi|147757119|gb|EDK64158.1| glucose-inhibited division protein A [Streptococcus pneumoniae SP11-BS70] gi|147760236|gb|EDK67225.1| glucose-inhibited division protein A [Streptococcus pneumoniae SP14-BS69] gi|147923671|gb|EDK74783.1| glucose-inhibited division protein A [Streptococcus pneumoniae SP3-BS71] gi|183577875|gb|EDT98403.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae MLV-016] gi|225725047|gb|ACO20899.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae P1031] gi|225727100|gb|ACO22951.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae Taiwan19F-14] gi|298237525|gb|ADI68656.1| glucose-inhibited division protein A [Streptococcus pneumoniae TCH8431/19A] gi|301793413|emb|CBW35780.1| glucose inhibited division protein A [Streptococcus pneumoniae INV104] gi|301799300|emb|CBW31826.1| glucose inhibited division protein A [Streptococcus pneumoniae OXC141] gi|306408343|gb|ADM83770.1| NAD/FAD-utilizing enzyme apparently involved in cell division [Streptococcus pneumoniae AP200] gi|327390541|gb|EGE88881.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae GA04375] Length = 637 Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust. Identities = 259/615 (42%), Positives = 371/615 (60%), Gaps = 6/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DAL Sbjct: 9 YDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + D IQ ++LN KGPAVR R QAD+ELY M++ + +QENL + Q + Sbjct: 69 GGEMAKTIDKTYIQMKMLNTGKGPAVRALRAQADKELYSKEMRKTVENQENLTLRQTMID 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + V++TTGT LRG I IG LK +G S +L ++ Sbjct: 129 EILVEDGKVVGVRTATHQEYAAKAVIVTTGTALRGEIIIGDLKYSSGPNHSLASINLADN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 + + GR KTGTP R+ +I +D TE Q DE FS+ + + Q+ C +T Sbjct: 189 LKELGLEIGRFKTGTPPRVKASSINYDVTEIQPGDEVPNHFSYTSRDEDYVKDQVPCWLT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +H II N+ + +++G +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG NT+ Sbjct: 249 YTNGTSHEIIQNNLHRAPMFTGVVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRNTE 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE++Q + +I GLE ++R GYAIEYD + P +L TLETKKISGL Sbjct: 309 EVYVQGLSTSLPEDVQRDLVHSIKGLENAEMMRTGYAIEYDMVLPHQLRATLETKKISGL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMIDDL +KG +EP Sbjct: 369 FTAGQTNGTSGYEEAAGQGIIAGINAALKIQGKPELILKRSDGYIGVMIDDLVTKGTIEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G ++G + + R RF +++ L S+ L Sbjct: 429 YRLLTSRAEYRLILRHDNADMRLTEMGREIGLVDDERWARFEIKKNQFDNEMKRLDSIKL 488 Query: 484 ---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQIE 539 N + FK TA EFL P+ S Q++ + I P A +IE ++ E Sbjct: 489 KPVKETNAKVEEMGFKPLTDAVTAKEFLRRPEVSYQDVVAFIGPAAEDLDDKIIELIETE 548 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + M + ++K E++ IP + D+ + +++ E ++K ++ P + QAS+I Sbjct: 549 IKYEGYISKAMDQVAKMKRMEEKRIPANIDWDDIDSIATEARQKFKLINPETIGQASRIS 608 Query: 600 GMTPAALNLLLIYIK 614 G+ PA +++L++Y++ Sbjct: 609 GVNPADISILMVYLE 623 >gi|34557213|ref|NP_907028.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Wolinella succinogenes DSM 1740] gi|81170590|sp|Q7M9M5|MNMG_WOLSU RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|34482929|emb|CAE09928.1| GLUCOSE INHIBITED DIVISION PROTEIN A HOMOLOG [Wolinella succinogenes] Length = 625 Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust. Identities = 274/618 (44%), Positives = 368/618 (59%), Gaps = 11/618 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R +DVIV+GGGHAG EAA +A++G T L+T IG+ SCNPAIGGL KGHLV+EID Sbjct: 2 RDFDVIVVGGGHAGIEAAHASARMGCKTLLLTILVEQIGAASCNPAIGGLAKGHLVKEID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G+MG+V D G+QFR LN KGPAVRG R Q D + YR+ M+ L+ NL V Q Sbjct: 62 ALGGVMGKVTDLCGLQFRTLNASKGPAVRGTRAQIDMDRYRIMMRNLCLTTPNLTVAQEM 121 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E+ + + Q R + V++TTGTFL G++HIG GR+G+ S L Sbjct: 122 VEELIVEEGAVLGVRTQIGREYRSAKVIMTTGTFLNGLVHIGNRTSSNGRVGEPSSIKLS 181 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK--ITNRQIECG 241 S + GRLKTGT AR+ ++I + E+ D PFSF T K Q+ C Sbjct: 182 ESLRSLGLEVGRLKTGTCARIASESIDFSVMEQHPGDLPPPPFSFSTKKEEFAPTQLPCY 241 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN +TH II N + +++G I+ GPRYCPSIEDK+ RF ER HQIF+EP+ L Sbjct: 242 VTYTNEKTHEIIRSNFHRAPMFTGQIEGIGPRYCPSIEDKVNRFKERERHQIFVEPQTLE 301 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 Y NG++T++P ++Q IR++ GL+ I+R GYAIEYDY+NP EL TLETKKI Sbjct: 302 ATEYYLNGLTTSMPFDVQEAMIRSMAGLQNARIVRYGYAIEYDYVNPVELKHTLETKKIK 361 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 L+LAGQINGTTGYEEA AQGL AGIN+A + R ++Y+GV+IDDL +KG Sbjct: 362 NLYLAGQINGTTGYEEAGAQGLAAGINAALSVKGEEPFVLRRDEAYLGVLIDDLVTKGTK 421 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+ LR DNA+ RL G + G + E K Q + L L Sbjct: 422 EPYRMFTSRAEYRLLLREDNAEFRLLRHGARFGLVEEEALLALQKDEQS---IHGGLVHL 478 Query: 482 VLTSKNLSSTSISFKQD-GKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIER 535 +S S +++F ++ G+ + T F L I P + S + + Sbjct: 479 RESSATPSKETLAFLEEMGEEKINDKTTWLAIAGRKSFDEAKLRKISPLFEEMSERALGQ 538 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 + IE+ YA+Y +Q ++ K IP+ F + ++P LS E+ EKL P L A Sbjct: 539 VLIEAKYASYIQKQQESVGSMQEMLKVKIPEGFIFDTVPGLSLEVIEKLKRFNPPTLFAA 598 Query: 596 SKIEGMTPAALNLLLIYI 613 S+I G+TPA+L++L +YI Sbjct: 599 SEISGITPASLDVLHLYI 616 >gi|306828719|ref|ZP_07461911.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus mitis ATCC 6249] gi|304428897|gb|EFM31985.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus mitis ATCC 6249] Length = 637 Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust. Identities = 258/615 (41%), Positives = 372/615 (60%), Gaps = 6/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DAL Sbjct: 9 YDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + D IQ ++LN KGPAVR R QAD+ELY M++ + +Q+NL + Q + Sbjct: 69 GGEMAKTIDKTYIQMKMLNTGKGPAVRALRAQADKELYSKEMRKTVENQDNLTLRQTMID 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + V++TTGT LRG I IG LK +G S +L ++ Sbjct: 129 EILVEDGKVVGVRTATHQEYAAKAVIVTTGTALRGEIIIGDLKYSSGPNHSLASINLADN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 + + GR KTGTP R+ +I +D TE Q DE FS+ + + Q+ C +T Sbjct: 189 LKELGLEIGRFKTGTPPRVKASSINYDVTEIQPGDEAPNHFSYTSRDEDYVKDQVPCWLT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +H II N+ + +++G +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG NT+ Sbjct: 249 YTNGTSHEIIQNNLHRAPMFTGVVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRNTE 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE++Q + + +I GLE ++R GYAIEYD + P +L TLETKKISGL Sbjct: 309 EVYVQGLSTSLPEDVQRELVHSIKGLENAEMMRTGYAIEYDMVLPHQLRATLETKKISGL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMIDDL +KG +EP Sbjct: 369 FTAGQTNGTSGYEEAAGQGIIAGINAALKIQGKPELILKRSDGYIGVMIDDLVTKGTIEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G ++G + + R RF +++ L S+ L Sbjct: 429 YRLLTSRAEYRLILRHDNADMRLTEMGREIGLVDDERWARFEIKKNQFDNEMKRLDSIKL 488 Query: 484 ---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQIE 539 N + FK TA EFL P+ S Q++ + I P A +IE ++ E Sbjct: 489 KPVKETNAKVEEMGFKPLTDAVTAKEFLRRPEVSYQDVVAFIGPAAEDLDDKIIELIETE 548 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + M + ++K E++ IP + D+ + +++ E ++K ++ P + QAS+I Sbjct: 549 IKYEGYISKAMDQVAKMKRMEEKRIPANIDWDDIDSIATEARQKFKLINPETIGQASRIS 608 Query: 600 GMTPAALNLLLIYIK 614 G+ PA +++L++Y++ Sbjct: 609 GVNPADISILMVYLE 623 >gi|331267203|ref|YP_004326833.1| glucose-inhibited division protein A [Streptococcus oralis Uo5] gi|326683875|emb|CBZ01493.1| glucose-inhibited division protein A [Streptococcus oralis Uo5] Length = 637 Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust. Identities = 258/615 (41%), Positives = 372/615 (60%), Gaps = 6/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DAL Sbjct: 9 YDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + D IQ ++LN KGPAVR R QAD+ELY M++ + +QENL + Q + Sbjct: 69 GGEMAKTIDKTYIQMKMLNTGKGPAVRALRAQADKELYSKEMRKTVENQENLTLRQTMID 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + V++TTGT LRG I IG LK +G S +L ++ Sbjct: 129 EILVEDGKVVGVRTATHQEYAAKAVIVTTGTALRGEIIIGDLKYSSGPNHSLASINLADN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 + + GR KTGTP R+ +I +D TE Q DE FS+ + + Q+ C +T Sbjct: 189 LKELGLEIGRFKTGTPPRVKASSINYDVTEIQPGDEAPNHFSYTSRDEDYVKDQVPCWLT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +H II N+ + +++G +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG NT+ Sbjct: 249 YTNGTSHEIIQNNLHRAPMFTGVVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRNTE 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE++Q + + +I GLE ++R GYAIEYD + P +L TLETKKISGL Sbjct: 309 EVYVQGLSTSLPEDVQRELVHSIKGLENAEMMRTGYAIEYDMVLPHQLRATLETKKISGL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMIDDL +KG +EP Sbjct: 369 FTAGQTNGTSGYEEAAGQGIIAGINAALKIQGKPELILKRSDGYIGVMIDDLVTKGTIEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G ++G + + R RF +++ L S+ L Sbjct: 429 YRLLTSRAEYRLILRHDNADMRLTEMGREIGLVDDERWARFEIKKNQFDNEMKRLDSIKL 488 Query: 484 ---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQIE 539 N ++ FK TA EFL P+ S Q++ + I P +IE ++ E Sbjct: 489 KPVKETNAKVEAMGFKPLTDAVTAKEFLRRPEVSYQDVVAFIGPATEDLDDKIIELIETE 548 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + M + ++K E++ IP + D+ + +++ E ++K ++ P + QAS+I Sbjct: 549 IKYEGYISKAMDQVAKMKRMEEKRIPANIDWDDIDSIATEARQKFKLINPETIGQASRIS 608 Query: 600 GMTPAALNLLLIYIK 614 G+ PA +++L++Y++ Sbjct: 609 GVNPADISILMVYLE 623 >gi|291514794|emb|CBK64004.1| glucose-inhibited division protein A [Alistipes shahii WAL 8301] Length = 673 Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust. Identities = 278/668 (41%), Positives = 390/668 (58%), Gaps = 65/668 (9%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IVIGGGHAGCEAA+ AA+LG+ T L+T + + +MSCNPA+GG+ KG +VREIDAL Sbjct: 5 YDIIVIGGGHAGCEAASAAARLGSRTLLLTMDMAKLAAMSCNPAVGGVAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MGR+ D IQFR+LN KG A+ PR Q D+ + +R + + NL + Q Sbjct: 65 GGQMGRITDLTTIQFRMLNRSKGAAMWSPRAQCDKTRFSEEWRRTLENTWNLYIWQDAAT 124 Query: 126 ------------------------GFNTEKNIISSIVMQD---NSMIR------------ 146 FN+ ISS D + +R Sbjct: 125 ELLFAPAPETNAAPSDNLPDETTTSFNSAPGTISSAAESDADSDPTLRNAPSAAGKLAIR 184 Query: 147 -----------CSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGR 195 C V+LT+GTFLRGV+H G GR GD+ S+ + S F+TGR Sbjct: 185 GVRTRMGVEFSCRKVILTSGTFLRGVMHCGASHAEGGRAGDAASHGITESLRAIGFETGR 244 Query: 196 LKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGITRTNLETHRIIM 254 +KTGTPARLD +TI ++ E Q+ DE FSF + K Q+ C + T+ E H I+ Sbjct: 245 MKTGTPARLDARTIDFEILEPQYGDENPAKFSFSPETKPIKEQLPCFLVYTSKEVHDILR 304 Query: 255 ENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTAL 314 S +++G I GPRYCPSIEDK+ F +++ HQ+FLEPEG +T+ Y NG S++L Sbjct: 305 TGFDRSPLFNGTICGIGPRYCPSIEDKLRTFADKDQHQLFLEPEGSSTNEYYLNGFSSSL 364 Query: 315 PEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTG 374 P E+Q + + I G E ++I RPGYAIEYDY P +L +LETK +SGL+ AGQ+NGTTG Sbjct: 365 PWEVQWKALHKIRGFEDLHIFRPGYAIEYDYFPPTQLHHSLETKLVSGLYFAGQVNGTTG 424 Query: 375 YEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYR 434 YEEAAAQGL+AGIN+ R + R ++YIGV+IDDL +KGV EPYRMFTSRAEYR Sbjct: 425 YEEAAAQGLIAGINAHRAMKGESPVVLKRDEAYIGVLIDDLVTKGVDEPYRMFTSRAEYR 484 Query: 435 ISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL-----KSLVLTSKNLS 489 I LR DNAD RLTP+G K+G I QK++ + ++ + SL+ +S+ N Sbjct: 485 ILLRQDNADIRLTPLGYKIGLIS---QKQYDHFTKKNTLVESLISFAREQSVKAAEINDY 541 Query: 490 STSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF------SSLVIERLQIESSYA 543 S+ + + R Y+ L + + +L + P RKF + IE +I+ Y Sbjct: 542 LKSVDSEPLSQGRKLYDILMRNNVTFDSLQNALPKLRKFIAANEITPEAIEETEIQIKYK 601 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y R+ A++++ E IP++FD+ S+ AL+ E ++KLS ++P + QAS+I G++P Sbjct: 602 GYIEREKFIAEKLRRLENIRIPENFDFHSMNALTIEARQKLSRIRPETIGQASRIPGVSP 661 Query: 604 AALNLLLI 611 A +N+LL+ Sbjct: 662 ADVNVLLV 669 >gi|160944276|ref|ZP_02091505.1| hypothetical protein FAEPRAM212_01785 [Faecalibacterium prausnitzii M21/2] gi|158444458|gb|EDP21462.1| hypothetical protein FAEPRAM212_01785 [Faecalibacterium prausnitzii M21/2] Length = 624 Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust. Identities = 267/612 (43%), Positives = 371/612 (60%), Gaps = 4/612 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAG EAA AA LGA TA+ T IG+M CNP+IGG KG LVRE+DAL Sbjct: 7 YDVIVIGAGHAGIEAAHAAAVLGAKTAVFTMSLDAIGNMPCNPSIGGTAKGTLVREVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+MG ADA +Q R+LN KGPAV R Q DR Y M+ + L + Q EV Sbjct: 67 GGVMGLAADATYLQSRMLNKGKGPAVHALRVQTDRRRYNEYMKHALEQTPGLAIHQAEVV 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + ++ Q + VVL TGT L G I +G +G G +N+L +S Sbjct: 127 ALEVENGHVKGVITQLHGEYTAKCVVLATGTNLGGKIFVGDAWYASGPDGMHAANALTDS 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFAD--ERLIPFSFMTDKITNRQIECGIT 243 R KTGTPAR+ ++I + K E Q D L PFSF+TD + ++EC I Sbjct: 187 LKAAGLPLRRFKTGTPARVHRRSIDFSKLECQPGDPDSELQPFSFLTDAPLHNKVECWIA 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN ETH+II++NI+ S +Y G I+ GPRYCPSIEDK+VRF ++ H +F+EP G NT+ Sbjct: 247 YTNPETHKIILDNIQRSPLYGGIIEGVGPRYCPSIEDKVVRFSGKDRHPLFVEPCGENTE 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G S++LPE++Q+ F +I G E + I+RP YAIEYD ++P L TLE+K + GL Sbjct: 307 EMYLQGASSSLPEDVQNAFYHSIKGFEHLEIMRPAYAIEYDCVDPTSLEATLESKVVRGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQ NGT+GYEEAAAQGL+AG+N+AR + + + R SY+G ++DDL +KGV++P Sbjct: 367 YGAGQFNGTSGYEEAAAQGLLAGLNAARNALGKEQLVLPRHTSYLGTLVDDLVTKGVMDP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRM TSR+EYR++LR DNAD RLTPIG + G + + R ++ Q R L L Sbjct: 427 YRMMTSRSEYRLTLRQDNADQRLTPIGREYGLVQDDRWAKYQHTQQILEAERRRLHEAHL 486 Query: 484 TSKNLSST--SISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 + +L + ++ + A E L P+ S + I + + ++ ERL+ E Sbjct: 487 RTADLRAAMEAVGLAPAAEGGIAEELLRRPEISYPLVAGIIGWGDEITPMLAERLETEIK 546 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ +E+ EK LIP+DF+Y++L L+ E +EKL+ ++P NL QA +I G+ Sbjct: 547 YAGYIARQDRMIREVARHEKTLIPEDFEYAALTGLTLEAREKLARIRPRNLGQAGRIPGV 606 Query: 602 TPAALNLLLIYI 613 +P+ + L I + Sbjct: 607 SPSDVAQLSIAL 618 >gi|251800244|ref|YP_003014975.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Paenibacillus sp. JDR-2] gi|247547870|gb|ACT04889.1| glucose inhibited division protein A [Paenibacillus sp. JDR-2] Length = 629 Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust. Identities = 277/618 (44%), Positives = 384/618 (62%), Gaps = 16/618 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 Y+VIVIG GHAG EAA +A++G T L+T + M CNP+IGG KGH+VREIDAL Sbjct: 8 YEVIVIGAGHAGAEAALASARMGCETLLLTINLDMVAFMPCNPSIGGPAKGHVVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MGR D IQ R+LN KGPAV R QAD+ Y+ M++ I ++L + QG Sbjct: 68 GGEMGRNIDKTFIQMRMLNTGKGPAVHALRAQADKFSYQHTMKKTIEETDHLTLRQGMAE 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E I+ IV + ++ R VV+TTGT+LRG I +G+L +G PS L S Sbjct: 128 DLIVEDGKIAGIVTKTGAIYRAKAVVITTGTYLRGKIIMGELMYESGPNNQQPSVKLSAS 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + F R KTGTP R+ TI + KTE Q D+ FS+ T N Q+ C +T T Sbjct: 188 LKELGFKLARFKTGTPPRVHKDTIDFSKTEIQPGDDNPKFFSYETKSSDNEQLPCWLTYT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 + TH+II +N+ + ++SG I+ GPRYCPSIEDKIVRF ++ HQIFLEPEG +T Sbjct: 248 SEATHKIINDNLHRAPMFSGAIEGTGPRYCPSIEDKIVRFADKPKHQIFLEPEGKHTSEY 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+ST++PE++Q +R+IPGLEKV ++R GYAIEYD + P +L+P+LETK + GLF Sbjct: 308 YVQGLSTSMPEDVQLGILRSIPGLEKVEMMRNGYAIEYDAVVPTQLWPSLETKLVDGLFT 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGT+GYEEAA QG++AGIN+ARK + + R+ YIGVMIDDL +KG +PYR Sbjct: 368 AGQINGTSGYEEAAGQGIIAGINAARKVQGKEPVVIDRSQGYIGVMIDDLVTKGTSDPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAK----YIQEYNFLRSL---- 477 + TSRAEYR+ LR DNAD RLTP G ++G I E R + F QE L ++ Sbjct: 428 LLTSRAEYRLLLRHDNADLRLTPTGYEIGLISEERYQAFLNKKELVAQEIERLGTVKIKP 487 Query: 478 -LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 + VL + N S I+F D A L P+ S L + P + + E++ Sbjct: 488 EVAQPVLDAAN--SAPIAFTMD-----ALSLLRRPELSYALLEQLSPSELPLTEEMKEQV 540 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ YA Y +Q+ + + + EK+ IP D YS + L++E K+KL+ ++P ++ QAS Sbjct: 541 EIQIKYAGYIEKQLHQVERLSKMEKKKIPDDIVYSEVHGLASEAKQKLADIRPLSIGQAS 600 Query: 597 KIEGMTPAALNLLLIYIK 614 +I G+TPA +++LL+Y++ Sbjct: 601 RIAGVTPADISILLVYLE 618 >gi|323128288|gb|ADX25585.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 632 Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust. Identities = 267/618 (43%), Positives = 373/618 (60%), Gaps = 6/618 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAG EA+ +++G T L T + M CNP+IGG KG +VREIDA Sbjct: 8 SYDVIVIGAGHAGVEASLATSRMGCKTLLATINLDMLAFMPCNPSIGGSAKGIVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ ++LN KGPAVR R QAD+ LY M+ + Q NL + Q + Sbjct: 68 LGGEMGKNIDKTYIQMKMLNTGKGPAVRALRAQADKSLYAREMKHTVEKQANLTLRQTMI 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ VV+TTGT LRG I +G+LK +G S +L + Sbjct: 128 DDILVEDGRVVGVLTATGQKFAAKAVVVTTGTALRGEIILGELKYSSGPNNSLASVTLAD 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--NRQIECGI 242 + K + GR KTGTP R+ +I +D+TE Q D++ FSFM+ QI C + Sbjct: 188 NLKKLGLEIGRFKTGTPPRVKASSIDYDQTEIQPGDDKPNHFSFMSKDADYLKDQIPCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +H II +N+ + ++SG +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG +T Sbjct: 248 TYTNQTSHDIINQNLYRAPMFSGIVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRDT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q + I +I GLEK ++R GYAIEYD + P +L TLETK ISG Sbjct: 308 EEVYVQGLSTSLPEDVQKELIHSIKGLEKAEMMRTGYAIEYDIVLPHQLRATLETKLISG 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQ NGT+GYEEAA QG++AGIN+A K + R+D+YIGVMIDDL +KG LE Sbjct: 368 LFTAGQTNGTSGYEEAAGQGIIAGINAALKVQGKPELILKRSDAYIGVMIDDLVTKGTLE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFA-KYIQEYNFLRSL--LK 479 PYR+ TSRAEYR+ LR DNAD RLT IG +G + + R F K Q N L+ L +K Sbjct: 428 PYRLLTSRAEYRLILRHDNADMRLTEIGRDIGLVDDDRWNAFEIKKNQFDNELKRLDSIK 487 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQI 538 + N + FK TA EF+ P+ S + P A + +IE L+ Sbjct: 488 LKPIKETNDRVQDLGFKPLTDAMTAKEFMRRPEIDYATAVSFVGPAAEDLDAKIIELLET 547 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E Y Y + + + ++K E++ IP + D+ ++ +++ E ++K + P + QAS+I Sbjct: 548 EIKYEGYIRKALDQVAKMKRMEEKRIPANIDWDAIDSIATEARQKFKKINPETIGQASRI 607 Query: 599 EGMTPAALNLLLIYIKKN 616 G+ PA +++L++Y++ N Sbjct: 608 SGVNPADISILMVYLEGN 625 >gi|289422576|ref|ZP_06424419.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Peptostreptococcus anaerobius 653-L] gi|289157148|gb|EFD05770.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Peptostreptococcus anaerobius 653-L] Length = 631 Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust. Identities = 264/620 (42%), Positives = 376/620 (60%), Gaps = 15/620 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YD++V+G GHAGCEAA +A++G T +IT +I ++ CNP+IGG GKG LV+E+DA Sbjct: 9 NYDIVVVGAGHAGCEAALASARMGMKTLMITMSLDSIAALPCNPSIGGTGKGQLVKELDA 68 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG D IQ R+LN KGPAV R Q D+ LY M+ I +Q+NLD++ EV Sbjct: 69 LGGQMGLNIDETYIQSRMLNTAKGPAVHSLRAQTDKNLYHRVMKETIENQDNLDLVMDEV 128 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E+ + +V + ++ R +L TG +L+ I +G G G + + L + Sbjct: 129 EEILHEEKKVLGVVTRLGNIYRSKMTILCTGVYLKSKIFVGHDTFDEGPNGLNYAKKLTD 188 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S ++ D R KTGTPAR+ +I + E Q DE++ PFSFM + I QI C +TR Sbjct: 189 SLVELGLDMRRFKTGTPARVHRDSIDFSVMEPQLGDEKVTPFSFMNEDIEKDQITCYLTR 248 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ET ++I ENI SA+YSG+I+ GPRYCPSIEDKIV+F ++ HQ+F+EPEGL+T Sbjct: 249 TTPETKQLIQENIHRSAMYSGNIEGTGPRYCPSIEDKIVKFSDKQTHQLFIEPEGLDTKE 308 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+ST+ P EIQ + RTI GLE I+RP YAIEYD I+P +L LE K + LF Sbjct: 309 MYIQGVSTSFPMEIQTKMYRTIKGLENARIMRPAYAIEYDCIDPTKLKQNLEIKGVENLF 368 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ NGT+GYEEAAAQG++AGIN+ K + R+++YIGV+IDDL +KG EPY Sbjct: 369 SAGQFNGTSGYEEAAAQGIIAGINAVLKIRGEEPFILDRSEAYIGVLIDDLVTKGTNEPY 428 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF----AKYIQEYNFLRSLLKS 480 RM TSRAEYR+ LR DNAD RLT G +G + + R R+ AK E + LR + Sbjct: 429 RMMTSRAEYRLYLRQDNADARLTQKGYDIGLVTQERYDRYQAKKAKIEAEIDRLRRDRVT 488 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-----VIER 535 + L + +G + YEFL P+ +S+ D K S L V ++ Sbjct: 489 PNEANAYLEERGYALLNNGI--SLYEFLKRPEID----YSVLEDLGKASDLDLSDEVKDQ 542 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 I Y Y +QM + + + E + + +D +Y + L E ++KL+ +KP ++ QA Sbjct: 543 AVIVIKYEGYIDKQMKQIDQFRKLENKKLREDMNYDEIEGLRLEARQKLNDIKPSSIGQA 602 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G++PA +++LLIY+++ Sbjct: 603 SRISGVSPADISVLLIYLEQ 622 >gi|225010334|ref|ZP_03700806.1| glucose inhibited division protein A [Flavobacteria bacterium MS024-3C] gi|225005813|gb|EEG43763.1| glucose inhibited division protein A [Flavobacteria bacterium MS024-3C] Length = 622 Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust. Identities = 283/629 (44%), Positives = 394/629 (62%), Gaps = 21/629 (3%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M YDVIV+GGGHAG EAAA AA +GAST L+T +IG MSCNPA+GG+ KG +VR Sbjct: 1 MFQDKYDVIVVGGGHAGAEAAAAAANMGASTLLVTMNLQSIGQMSCNPAMGGIAKGQIVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADR----ELYRLAMQREILSQEN 116 EIDAL G G V+D + IQF++LN KGPA+ PRTQ DR E +RLA++R N Sbjct: 61 EIDALGGYSGIVSDLSAIQFKMLNKSKGPAMWSPRTQNDRMRFAEEWRLALERTT----N 116 Query: 117 LDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGD 176 +D Q V+ E N ++ + I +VVLT GTFL G+IHIG+ ++ GR G+ Sbjct: 117 VDFYQDMVSSLIIEGNTVTGVKTSLGIPIYGKSVVLTNGTFLNGLIHIGERQLGGGRAGE 176 Query: 177 SPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR 236 S+ + + F++GR+KTGTP R+DG+++ + Q D + FS+ K Sbjct: 177 KASSGITEQLVALGFESGRMKTGTPPRVDGRSLDYSVMIPQPGDAQPEKFSYTNTKPLAT 236 Query: 237 QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLE 296 Q +C +T T+ H ++ E S +++G I+S GPRYCPSIEDKI RF +++ HQ+F+E Sbjct: 237 QRDCHMTHTSSLVHDLLREGFDRSPMFNGSIQSLGPRYCPSIEDKINRFADKDSHQLFVE 296 Query: 297 PEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLE 356 PEG +T VY NG ST+LPEE+Q + +R++ G EKV RPGYAIEYDY P +L +LE Sbjct: 297 PEGWDTVEVYVNGFSTSLPEEVQFKALRSVKGFEKVKFFRPGYAIEYDYFPPTQLTHSLE 356 Query: 357 TKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 TK ISGLF AGQINGTTGYEEAA+QGL+AGIN+A K + D R ++YIGV+IDDL Sbjct: 357 TKLISGLFFAGQINGTTGYEEAASQGLMAGINAALKVQEKDPFTLQRDEAYIGVLIDDLI 416 Query: 417 SKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFA-KYIQEYN--- 472 +KG EPYRMFTSRAEYR LR DNAD RLTP+G +G E R K K N Sbjct: 417 TKGTDEPYRMFTSRAEYRTLLRQDNADFRLTPMGHAIGLASEDRLKAMELKASASENLVS 476 Query: 473 -FLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICP-----DAR 526 F + +K + + S S Q GK ++ S P+ ++ ++ S+ Sbjct: 477 FFRETSVKPAEINDQLASVGSAPISQSGKL---FKVFSRPNVTMDHMLSVDSVGSFVSEN 533 Query: 527 KFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSI 586 F+ V+E+ +I+ YA Y ++ A +++ E IP DFDYS L +LS E +EKL Sbjct: 534 NFAREVLEQAEIQIKYAGYIEKEKNNADKLQRLEHVKIPSDFDYSLLKSLSYEAREKLQE 593 Query: 587 LKPFNLLQASKIEGMTPAALNLLLIYIKK 615 ++P ++ QAS+I G++P+ +++LL+++ + Sbjct: 594 IQPVSIAQASRISGVSPSDISVLLVFLGR 622 >gi|257888104|ref|ZP_05667757.1| glucose-inhibited division protein A [Enterococcus faecium 1,141,733] gi|257824158|gb|EEV51090.1| glucose-inhibited division protein A [Enterococcus faecium 1,141,733] Length = 633 Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust. Identities = 269/621 (43%), Positives = 381/621 (61%), Gaps = 9/621 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAG EAA AA++G+ T L+T + M CNP++GG KG +VREIDA Sbjct: 8 AYDVIVVGAGHAGSEAALAAARMGSKTLLLTINLDMVAFMPCNPSVGGPAKGVVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ R+LN KGPAVR R QAD+ Y M+ I + NL + QG V Sbjct: 68 LGGEMGKNIDKTYIQMRMLNTGKGPAVRALRAQADKHAYSTQMKHTIEKEPNLTLRQGIV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E I +V + R VV+T GT LRG I IG+LK +G PS L N Sbjct: 128 EELIVEDGICHGVVTSTGASYRAKAVVITAGTALRGEIIIGELKYSSGPNNSQPSIGLAN 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR--QIECGI 242 + F R KTGTP R+ TI + TE+Q D+ FSF T + Q C + Sbjct: 188 HLKELGFAIERFKTGTPPRVKSSTIDYSVTEEQPGDKEPNHFSFSTPDSAYKLDQESCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T T TH+II +N+ + +++G ++ G RYCPSIEDKIVRF ++ HQ+FLEPEGLNT Sbjct: 248 TYTGETTHQIIRDNLHRAPMFTGIVEGVGARYCPSIEDKIVRFADKPRHQLFLEPEGLNT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q + +I GLEKV ++R GYAIEYD + P +L PTLETK + Sbjct: 308 EEVYVQGLSTSLPEDVQVDMLHSIAGLEKVEMMRTGYAIEYDVVEPHQLRPTLETKVVEN 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQ NGT+GYEEAA QGL+AGIN+A K + + R+D YIGVMIDDL +KG E Sbjct: 368 LYTAGQTNGTSGYEEAAGQGLIAGINAALKVQGKEPLVIKRSDGYIGVMIDDLVTKGTNE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAK----YIQEYNFLRSL- 477 PYR+ TSRAEYR+ LR DNAD RLT +G ++G + E + K + K QE L ++ Sbjct: 428 PYRLLTSRAEYRLLLRHDNADLRLTEMGHRVGLVKEDQYKAYLKKKEAVEQEIKRLMNVR 487 Query: 478 LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 +K L++ + + +DG A +FL P+ + +L P+ + + IE+++ Sbjct: 488 IKPTEEVQAFLATINAAPLKDGV--LASDFLRRPEITYADLLRFIPENEELTPKEIEQVE 545 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ Y Y + M + +++K E + IP++ DY+++ L+ E K+KL ++P + QAS+ Sbjct: 546 IQIKYEGYIKKAMEKVEKLKRMEAKKIPENIDYAAINGLATEAKQKLQKIQPETIAQASR 605 Query: 598 IEGMTPAALNLLLIYIKKNTV 618 I G+ PA L++L++YI++ + Sbjct: 606 ISGVNPADLSILMVYIEQGKI 626 >gi|163754569|ref|ZP_02161691.1| glucose-inhibited division protein A [Kordia algicida OT-1] gi|161325510|gb|EDP96837.1| glucose-inhibited division protein A [Kordia algicida OT-1] Length = 623 Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust. Identities = 279/634 (44%), Positives = 383/634 (60%), Gaps = 30/634 (4%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M N YDVIV+G GHAG EAAA AA +G+ T L+T I MSCNPA+GG+ KG +VR Sbjct: 1 MFNTEYDVIVVGAGHAGSEAAAAAANMGSKTLLVTMNLQNIAQMSCNPAMGGIAKGQIVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADR----ELYRLAMQREILSQEN 116 EIDAL G G V D + IQF++LN KGPA+ PR Q+DR E +RL ++R EN Sbjct: 61 EIDALGGYSGIVTDNSAIQFKMLNKSKGPAMWSPRAQSDRMRFAEEWRLMLER----TEN 116 Query: 117 LDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGD 176 LD Q V G E I + IR TVVLT GTFL G+IHIG GR G+ Sbjct: 117 LDFYQEMVRGLIIENEEIKGVKTSLGLEIRSKTVVLTNGTFLNGLIHIGDKNFGGGRAGE 176 Query: 177 SPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITN 235 + + ++ F++GR+KTGTP R+DG+++ + K Q DE FS++ K Sbjct: 177 RAATGITEELVELGFESGRMKTGTPPRVDGRSLDYSKMIIQPGDEVPDKFSYLKVTKPLE 236 Query: 236 RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFL 295 Q C +T T+ E H ++ E S +++G I+S GPRYCPSIEDKI RF +++ HQ+F+ Sbjct: 237 NQRACHMTYTSPEVHNLLREGFDRSPMFNGRIQSIGPRYCPSIEDKINRFADKDRHQLFV 296 Query: 296 EPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTL 355 EPEG NT VY NG ST+LPE++Q + +R++ G E V RPGYAIEYDY P +L TL Sbjct: 297 EPEGWNTVEVYVNGFSTSLPEDVQFKALRSVAGFENVKFFRPGYAIEYDYFPPTQLKHTL 356 Query: 356 ETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDL 415 ETK + GLF AGQINGTTGYEEAA+QGL+AGIN+A K + + R ++YIGV+IDDL Sbjct: 357 ETKLVEGLFFAGQINGTTGYEEAASQGLMAGINAALKVQEKEEFILKRNEAYIGVLIDDL 416 Query: 416 TSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLR 475 +KG EPYRMFTSRAEYR LR DNAD RLTP+G KLG + R + K + Sbjct: 417 ITKGTEEPYRMFTSRAEYRTLLRQDNADFRLTPVGHKLGLASDERLRSMEKKKTNSDAFI 476 Query: 476 SLLKSL---------VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICP--- 523 K VL +KN S KQ K ++ + P+ S++++ + Sbjct: 477 QFFKDTSVKPDEINPVLEAKNSSKV----KQQDKM---FKIFARPNISMEDMRKVASVEN 529 Query: 524 --DARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELK 581 + V+E+ +++ YA Y ++ A ++ E+ IP DF Y L LS E + Sbjct: 530 FIQEHELGKDVLEQTEVQVKYAGYINKEKSNADKLNNLERVKIPADFKYEGLTNLSMEAR 589 Query: 582 EKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 +KL+ ++P NL QAS+I G++P+ ++++L+Y+ + Sbjct: 590 QKLAKIRPVNLSQASRISGVSPSDISVMLVYLNR 623 >gi|257866267|ref|ZP_05645920.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Enterococcus casseliflavus EC30] gi|257873217|ref|ZP_05652870.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Enterococcus casseliflavus EC10] gi|257800225|gb|EEV29253.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Enterococcus casseliflavus EC30] gi|257807381|gb|EEV36203.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Enterococcus casseliflavus EC10] Length = 631 Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust. Identities = 264/624 (42%), Positives = 380/624 (60%), Gaps = 15/624 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+G GHAG EAA A+++GA T L+T + M CNP++GG KG +VREIDA Sbjct: 8 SYDVIVVGAGHAGSEAALAASRMGAKTLLLTINLDMVAFMPCNPSVGGPAKGVVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ R+LN KGPAVR R QAD+ Y M+R I + NL + QG V Sbjct: 68 LGGEMGKNIDKTYIQMRMLNTGKGPAVRALRAQADKHAYAAEMKRTIEKEANLTLRQGIV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E+ +V + + VV+T GT LRG I IG+LK +G PS L + Sbjct: 128 EKLIVEEGECRGVVTSTGARYQAQAVVITAGTALRGEIIIGELKYSSGPNNSQPSIGLAD 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNRQIE-CGI 242 + + R KTGTP R+ TI ++ TE Q DE+ FS+ T D+ N+ E C + Sbjct: 188 HLKELGLEIARFKTGTPPRVKSSTINYEVTEIQPGDEQPNHFSYSTPDEAYNQNQEPCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH+II +N+ + +++G ++ G RYCPSIEDKIVRF +++ HQ+FLEPEGL+T Sbjct: 248 TYTNEGTHQIINQNLHRAPMFTGIVEGVGARYCPSIEDKIVRFADKSRHQLFLEPEGLDT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST++PE++Q Q + +I GLEK ++R GYAIEYD + P +L PTLETK I Sbjct: 308 EEVYVQGLSTSMPEDVQVQMLHSIAGLEKAEMMRTGYAIEYDVVVPHQLRPTLETKVIEN 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQ NGT+GYEEAA QGL+AGIN+A K + R+D YIGVMIDDL +KG E Sbjct: 368 LFTAGQTNGTSGYEEAAGQGLIAGINAALKIQGKEPFIMKRSDGYIGVMIDDLVTKGTNE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYR+ TSRAEYR+ LR DNAD RLT +G ++G + E ++ Y+ + + + +K L Sbjct: 428 PYRLLTSRAEYRLLLRHDNADLRLTEVGHQIGLVPE---GQYEAYVAKKEAVEAEIKRLS 484 Query: 483 L--------TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIE 534 L++ + +DG A EFL P+ + + IE Sbjct: 485 KIRIKPTPEVQAYLTAKGTATLKDGV--LANEFLRRPEVTYAEMLQFIEANEALKPKEIE 542 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y + + + +++K E + IP++ DY+++ L+ E K+KL ++P + Q Sbjct: 543 QVEIQIKYEGYIKKALEKVEKLKRMEAKRIPENIDYAAINGLATEAKQKLQKIQPETIAQ 602 Query: 595 ASKIEGMTPAALNLLLIYIKKNTV 618 AS+I G+ PA +++L++YI++ + Sbjct: 603 ASRISGVNPADISILMVYIEQGKI 626 >gi|300770728|ref|ZP_07080607.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Sphingobacterium spiritivorum ATCC 33861] gi|300763204|gb|EFK60021.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Sphingobacterium spiritivorum ATCC 33861] Length = 619 Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust. Identities = 277/621 (44%), Positives = 391/621 (62%), Gaps = 16/621 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + Y+VIV+G GHAGCEAAA AA LG+S LIT I MSCNPAIGG+ KG +VREID Sbjct: 3 KKYNVIVVGAGHAGCEAAAAAANLGSSVLLITMNMGVIAQMSCNPAIGGVAKGQIVREID 62 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 A+ G G +AD + +QFR+LN+ KGPA+ PR+Q DR + + ++ + NLD+ Q Sbjct: 63 AMGGYTGIIADKSTLQFRMLNLSKGPAMWSPRSQNDRMRFAEEWRMQLEAIPNLDMWQDT 122 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + + ++ I VVLT GTFL GVIHIG+ K GR G+ + L Sbjct: 123 VKEVIVEGDKAAGVITSLGIRIEADAVVLTNGTFLNGVIHIGEKKFGGGRTGEKAATGLT 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + F++GR+KTGTP R+DG+++ ++ E+Q+ DE FS+ I Q C IT Sbjct: 183 EQLVSLGFESGRMKTGTPPRIDGRSLNYELMEEQWGDENKGRFSYTDVPIPTAQRCCWIT 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN + H ++ + S +++G IK GPRYCPSIEDKI RF ER HQIF+EPEG NT Sbjct: 243 YTNDKVHEMLKTGFERSPMFTGRIKGLGPRYCPSIEDKINRFAERERHQIFVEPEGFNTV 302 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y NG ST+LPE++Q + ++ IPG E + RPGYAIEYD+ P +L TLET +I L Sbjct: 303 EIYVNGFSTSLPEDVQQKALQLIPGFENARMYRPGYAIEYDFFPPMQLDLTLETLRIKHL 362 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEA AQG +AGIN+ ++ N L + R++SYIGV+IDDL +KG EP Sbjct: 363 FFAGQINGTTGYEEAGAQGFIAGINAHQRINDLHELTLKRSESYIGVLIDDLVTKGTEEP 422 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R+ LR DNAD RLTP+ KLG +GE R + + I+ + + L+ + Sbjct: 423 YRMFTSRAEHRLLLRQDNADIRLTPMAYKLGLVGEERLNKVNEKIKNSDAIVEYLRQNSV 482 Query: 484 TS-------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPD----ARKFSSLV 532 T+ ++L+S+ +S KTR + LS P +I ++ D +F Sbjct: 483 TADHINPVLEDLNSSPVS----QKTRM-FNILSRPQINIYDIKKADSDFESYLNQFDKET 537 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 IE+ +I+ Y +Y ++M +K E + I +FDY+SL +LS E ++KL +KP L Sbjct: 538 IEQAEIKVKYDSYFEKEMEIVNRMKKMEDKEINPNFDYNSLTSLSIEARQKLLKVKPRTL 597 Query: 593 LQASKIEGMTPAALNLLLIYI 613 QAS+I G++PA +++L++++ Sbjct: 598 GQASRISGVSPADISVLMVHM 618 >gi|255529925|ref|YP_003090297.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pedobacter heparinus DSM 2366] gi|255342909|gb|ACU02235.1| glucose inhibited division protein A [Pedobacter heparinus DSM 2366] Length = 620 Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust. Identities = 285/626 (45%), Positives = 387/626 (61%), Gaps = 22/626 (3%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIV+GGGHAGCEAAA AA LG+S LIT TI MSCNPA+GG+ KG +VREID Sbjct: 3 KEYDVIVVGGGHAGCEAAAAAANLGSSVLLITMNMETIAQMSCNPAMGGVAKGQIVREID 62 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADR----ELYRLAMQREILSQENLDV 119 A+ G G ++D +QFR+LN+ KGPA+ PRTQ DR E +RLA++R N+D Sbjct: 63 AMGGYSGIISDKTTLQFRMLNLSKGPAMWSPRTQNDRKRFAEEWRLALER----TPNVDF 118 Query: 120 IQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 Q V + N + + I+ VVLT GTFL G+IHIG+ K GR G+ + Sbjct: 119 WQDMVGSLLIKDNRVIGVKTAIGVEIKGKAVVLTNGTFLNGLIHIGEKKFGGGRTGEKAA 178 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIE 239 L F F+ GR+KTGTP R+DG+++ + E+Q+ DE FSF ++ Q Sbjct: 179 TGLTEQLTAFGFEAGRMKTGTPPRVDGRSLNYSLMEEQWGDENPGRFSFTNAELPKEQRC 238 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN H + E + S +++G IK GPRYCPSIEDKI RF ER HQIF+EPEG Sbjct: 239 CWITYTNANVHETLKEGFEKSPMFTGRIKGLGPRYCPSIEDKINRFAERERHQIFVEPEG 298 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 NT +Y NG ST+LPE++Q++ + IPG E + RPGYAIEYDY P +L TLETK Sbjct: 299 WNTCEIYVNGFSTSLPEDVQYRALTQIPGFENAKMFRPGYAIEYDYFPPTQLSLTLETKL 358 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 IS LF AGQINGTTGYEEAA+QG +AGIN+ +K + + R++SYIGV+IDDL +KG Sbjct: 359 ISNLFFAGQINGTTGYEEAASQGFIAGINAHQKVSGQQELIMKRSESYIGVLIDDLVTKG 418 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAE+R+ LR DNAD RL+PI KLG I + R + I+ + + + K Sbjct: 419 TEEPYRMFTSRAEHRLLLRQDNADIRLSPIAHKLGLISDERLDIVNQKIKNSDTIVAFAK 478 Query: 480 SLVLTSKNLSST-----SISFKQDGKTRTAYEFLSYPDFSIQNLFSICPD----ARKFSS 530 + N +S + Q+ K + LS P + ++ + ++F Sbjct: 479 KQGIEMNNANSMLEELGTTPLNQNVKL---FSLLSRPQVGMNDVRKVSEPLEGLLKQFDK 535 Query: 531 LVIERLQIESSYAAYTGR-QMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 IE+ +I+ Y +Y + Q I K K E+K + P +FDYS L +LS E +EKL +KP Sbjct: 536 ETIEQAEIKIKYESYFEKEQEIVNKMQKMEDKDINP-NFDYSQLVSLSKEAREKLLKIKP 594 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKK 615 L QAS+I G++P+ +++L+++I K Sbjct: 595 RTLGQASRISGVSPSDISVLMVHISK 620 >gi|225570319|ref|ZP_03779344.1| hypothetical protein CLOHYLEM_06416 [Clostridium hylemonae DSM 15053] gi|225160851|gb|EEG73470.1| hypothetical protein CLOHYLEM_06416 [Clostridium hylemonae DSM 15053] Length = 633 Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust. Identities = 269/625 (43%), Positives = 380/625 (60%), Gaps = 19/625 (3%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 N YDV+V+G GHAGCEAA AA+LG T + T +I M CNP IGG KGHLVREI Sbjct: 12 NDEYDVVVVGAGHAGCEAALAAARLGFCTIVFTVSVDSIALMPCNPNIGGSSKGHLVREI 71 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G MG+V D IQ ++LN KGPAV R QAD+ Y M++ + +Q+ L++ Q Sbjct: 72 DALGGEMGKVIDKTFIQSKMLNKSKGPAVHSLRAQADKLHYSRTMRQVLENQDRLEIKQA 131 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 EV TE N + + ++ RC V+L TGT+L+ G + G G +N L Sbjct: 132 EVVNILTEDNKVIGVQTYSGAVYRCRAVILCTGTYLKSRCIYGDISQNTGPNGLQAANYL 191 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KITNRQIEC 240 + R KTGTPAR+D T+ + K E+QF DER++PFSF TD I Q+ C Sbjct: 192 TECLKELGIRMYRFKTGTPARIDKNTVDFSKMEEQFGDERIVPFSFTTDPEDIQIDQVSC 251 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +T TN +TH II N+ S +YSG I+ GPRYCPSIEDK+V+F +++ HQ+F+EPEGL Sbjct: 252 WLTYTNKKTHDIIRANLDRSPLYSGMIEGTGPRYCPSIEDKVVKFADKDRHQVFIEPEGL 311 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T+ +Y G+S++LPE++Q+ RT+PGLE V I+R YAIEYD I+ ++L P+LE + I Sbjct: 312 ETNEMYIGGMSSSLPEDVQYAMYRTVPGLENVKIVRNAYAIEYDCIDARQLKPSLEFRNI 371 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF GQ NG++GYEEAAAQGLVAGIN+AR + + R+ +YIGV+IDDL +K Sbjct: 372 KGLFSGGQFNGSSGYEEAAAQGLVAGINAARMLQGKEPLVIDRSQAYIGVLIDDLVTKES 431 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRM TSRAEYR+ LR DNAD RLT +G + G I ++R+ ++ + ++ ++ Sbjct: 432 REPYRMMTSRAEYRLLLRQDNADRRLTKLGYEAGLI---EKERYEHFLMKEKWITEEIER 488 Query: 481 L--VLTSKNLSSTSISFKQDGKT----RTAYEFLSYPDFSIQNLFSICPDARK------F 528 + V N I + D T E + P+ S + L I D ++ Sbjct: 489 VNHVNVGANEQVQDILREYDSTPLNSGTTLAELIRRPELSYEALRPI--DKKRPVFPEGL 546 Query: 529 SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 +IE++ I Y Y RQ + ++ K EKR IP++ DY + +L E +KL + Sbjct: 547 EEEIIEQVNISIKYDGYIKRQEKQVEQFKKLEKRKIPENIDYDDIKSLRIEAVQKLKEYR 606 Query: 589 PFNLLQASKIEGMTPAALNLLLIYI 613 P ++ QAS+I G++PA +++LL+Y+ Sbjct: 607 PVSIGQASRISGVSPADISVLLVYL 631 >gi|229829506|ref|ZP_04455575.1| hypothetical protein GCWU000342_01598 [Shuttleworthia satelles DSM 14600] gi|229791937|gb|EEP28051.1| hypothetical protein GCWU000342_01598 [Shuttleworthia satelles DSM 14600] Length = 645 Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust. Identities = 265/626 (42%), Positives = 374/626 (59%), Gaps = 9/626 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 ++ +YDVIV+G GHAGCEAA A+LG T + T ++ M CNP IGG KGHLVRE Sbjct: 19 VSENYDVIVVGAGHAGCEAALACARLGLETIIFTVSMDSVAMMPCNPHIGGSSKGHLVRE 78 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G MG D +Q ++LN KGPAV R QAD+ Y + M++ + + ++L + Q Sbjct: 79 IDALGGQMGINIDKTFLQSKMLNASKGPAVHSLRCQADKYRYSVEMRKTLQATDHLTLRQ 138 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 EV TE + + R V+L TGT+L+ G + G G +N Sbjct: 139 AEVTEILTENGRAAGCRTFSGASYRSKAVILATGTYLKARCLYGDVIEYTGPGGLRSANH 198 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KITNRQIE 239 L S K R KTGTPAR++ +I + + + Q+ D + PFSF TD + Q+ Sbjct: 199 LTASLEKLGIRLRRFKTGTPARIERSSIDFSRMQPQYGDSPVEPFSFTTDPASVQKEQVT 258 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +T TN + HRI+ ENI S IYSG I+ GPRYCPSIEDK+V+F +++ HQ+F+EPEG Sbjct: 259 CYLTYTNEKGHRILRENIDRSPIYSGLIEGIGPRYCPSIEDKVVKFPDKSRHQLFVEPEG 318 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L+T +Y +G S+++PE++Q+ F TIPGLE I R YAIEYD I+ +L +LE K+ Sbjct: 319 LDTSEMYISGASSSMPEDVQYDFYHTIPGLEHAKITRNAYAIEYDCIDANQLDASLECKE 378 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 + GLF GQ NG++GYEEAAAQGL+AGIN+A K + + R+ SYIGV+IDDL +K Sbjct: 379 VPGLFAGGQFNGSSGYEEAAAQGLIAGINAAMKIQGKEALILDRSSSYIGVLIDDLVTKE 438 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRM TSRAEYR+ LR DNAD RLTP+G ++G I E R +R + R +K Sbjct: 439 SFEPYRMMTSRAEYRLLLRQDNADLRLTPLGYQVGLISEDRYQRVRAKKLAIDRERERIK 498 Query: 480 SLVLTSKNL------SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVI 533 + L S S +DG + E + P+ S Q L + PD + V Sbjct: 499 GIRLGGSRQNNDLLRSWDSSPIPEDGSA-SLEELIRRPELSYQKLADLDPDRPPLAEDVC 557 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 +++ I Y Y RQ+ + K K E++LIP + DY + L E ++KLS ++P N+ Sbjct: 558 QQINIGVKYQGYIDRQIKQVKRFKKLEEKLIPGELDYEKVDNLRIEARQKLSRIRPKNIG 617 Query: 594 QASKIEGMTPAALNLLLIYIKKNTVK 619 QAS+I G++PA +++L++YIK+ + Sbjct: 618 QASRISGVSPADISVLMVYIKQGKYR 643 >gi|325846380|ref|ZP_08169349.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481564|gb|EGC84604.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 632 Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust. Identities = 270/619 (43%), Positives = 372/619 (60%), Gaps = 6/619 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 I+ SYDV+VIG GHAGCEAA A+LG T ++T ++ M CNP IGG GKGH+VRE Sbjct: 8 IDESYDVVVIGAGHAGCEAALSIARLGFKTLVLTTSMESVADMPCNPNIGGTGKGHIVRE 67 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M D IQ R+LN KGPAV R QAD+ Y M++ + SQENLD+ + Sbjct: 68 IDALGGEMAINIDKTFIQSRMLNTSKGPAVHSLRVQADKIKYHQEMKKTLESQENLDLFE 127 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 EV N E + S+ ++ V+ TGT+L G I +G + +G G S + Sbjct: 128 QEVDKINVEDGRVKSVETVQGAIFPTKACVVCTGTYLNGKILMGDFQKTSGPHGLSAATH 187 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT---DKITNRQI 238 L +S F R KTGTPAR+D K++ KTE Q DE ++ FSF+ D +Q Sbjct: 188 LSDSLEDLGFTLRRFKTGTPARVDRKSLDLTKTEIQKGDENIVAFSFLNEGKDFSDKKQE 247 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C +T T +T IIMEN++ S +Y G +K GPRYCPSIEDK+VRF +R+ HQ+F+EPE Sbjct: 248 ACYLTYTTEKTKEIIMENLERSPMYGGLVKGIGPRYCPSIEDKMVRFPDRDIHQVFIEPE 307 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 L+TD +Y G+S+ LP+E+Q +F +TI GLE IIRP Y IEYD ++ L +LE+K Sbjct: 308 SLSTDEMYVQGVSSTLPQEVQKEFYKTIEGLEDCKIIRPAYGIEYDCLDSTNLKRSLESK 367 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 +I LF AGQING++GYEEAA QGLVAGIN+A K D + R+D+YIGV+IDDL +K Sbjct: 368 EIENLFFAGQINGSSGYEEAAGQGLVAGINAALKLRGDDPLILDRSDAYIGVLIDDLVTK 427 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCI-GERRQKRFAKYIQEYNFLRSL 477 G EPYRM TSR EYR+++R DNAD RLT ++G + ER QK K + + L Sbjct: 428 GTNEPYRMMTSRCEYRLTMRQDNADLRLTEKAHEIGLVTDERYQKMIEKRKNIEDEINRL 487 Query: 478 LKSLVLTSK--NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIER 535 K +V S+ N I + ++ + P+ + + L + PD + Sbjct: 488 QKVMVGPSQENNKIMEEIGSSPLKTGYSLFDLIKRPELTYEKLEILDPDRPSLPKFQQIQ 547 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 +Q E Y Y +QM + + K E + + D DY+ + L E EKL+ +KP ++ QA Sbjct: 548 VQTEIKYQGYIKKQMADIGKFKKLENKKLDHDTDYTKIKGLKKESAEKLNKIKPDSIGQA 607 Query: 596 SKIEGMTPAALNLLLIYIK 614 S+I G++PA +N+LLI +K Sbjct: 608 SRISGVSPADINVLLIRLK 626 >gi|149010996|ref|ZP_01832301.1| glucose-inhibited division protein A [Streptococcus pneumoniae SP19-BS75] gi|147764632|gb|EDK71562.1| glucose-inhibited division protein A [Streptococcus pneumoniae SP19-BS75] Length = 637 Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust. Identities = 258/615 (41%), Positives = 371/615 (60%), Gaps = 6/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DAL Sbjct: 9 YDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + D IQ ++LN KGPAVR R QAD+ELY M++ + +QENL + Q + Sbjct: 69 GGEMAKTIDKTYIQMKMLNTGKGPAVRALRAQADKELYSKEMRKTVENQENLTLRQTMID 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + V++TTGT LRG I IG LK +G S +L ++ Sbjct: 129 EILVEDGKVVGVRTATHQEYAAKAVIVTTGTALRGEIIIGDLKYSSGPNHSLASINLADN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 + + GR KTGTP R+ +I +D TE Q DE FS+ + + Q+ C +T Sbjct: 189 LKELGLEIGRFKTGTPPRVKASSINYDVTEIQPGDEAPNHFSYTSRDEDYVKDQVPCWLT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +H II N+ + +++G +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG NT+ Sbjct: 249 YTNGTSHEIIQNNLHRAPMFTGVVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRNTE 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE++Q + +I GLE ++R GYAIEYD + P +L TLETKKISGL Sbjct: 309 EVYVQGLSTSLPEDVQRDLVHSIKGLENAEMMRTGYAIEYDMVLPHQLRATLETKKISGL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMIDDL +KG +EP Sbjct: 369 FTAGQTNGTSGYEEAAGQGIIAGINAALKIQDKPELILKRSDGYIGVMIDDLVTKGTIEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G ++G + + R RF +++ L S+ L Sbjct: 429 YRLLTSRAEYRLILRHDNADMRLTEMGREIGLVDDERWARFEIKKNQFDNEMKRLDSIKL 488 Query: 484 ---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQIE 539 N + FK TA EFL P+ S Q++ + I P A +IE ++ E Sbjct: 489 KPVKETNAKVEEMGFKPLTDAVTAKEFLRRPEVSYQDVVAFIGPAAEDLDDKIIELIETE 548 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + ++K E++ IP + D+ + +++ E ++K ++ P + QAS+I Sbjct: 549 IKYEGYISKAIDQVAKMKRMEEKRIPANIDWDDIDSIATEARQKFKLINPETIGQASRIS 608 Query: 600 GMTPAALNLLLIYIK 614 G+ PA +++L++Y++ Sbjct: 609 GVNPADISILMVYLE 623 >gi|168492407|ref|ZP_02716550.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae CDC0288-04] gi|183573419|gb|EDT93947.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae CDC0288-04] Length = 637 Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust. Identities = 258/615 (41%), Positives = 371/615 (60%), Gaps = 6/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DAL Sbjct: 9 YDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + D IQ ++LN KGPAVR R QAD+ELY M++ + +QENL + Q + Sbjct: 69 GGEMAKTIDKTYIQMKMLNTGKGPAVRALRAQADKELYSKEMRKTVENQENLTLRQTMID 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + V++TTGT LRG I IG LK +G S +L ++ Sbjct: 129 EILVEDGKVVGVRTATHQEYAAKAVIVTTGTALRGEIIIGDLKYSSGPNHSLASINLADN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 + + GR KTGTP R+ +I +D TE Q DE FS+ + + Q+ C +T Sbjct: 189 LKELGLEIGRFKTGTPPRVKASSINYDVTEIQPGDEAPNHFSYTSRDEDYVKDQVPCWLT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +H II N+ + +++G +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG NT+ Sbjct: 249 YTNGTSHEIIQNNLHRAPMFTGVVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRNTE 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE++Q + +I GLE ++R GYAIEYD + P +L TLETKKISGL Sbjct: 309 EVYVQGLSTSLPEDVQRDLVHSIKGLENAEMMRTGYAIEYDMVLPHQLRATLETKKISGL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMIDDL +KG +EP Sbjct: 369 FTAGQTNGTSGYEEAAGQGIIAGINAALKIQGKPELILKRSDGYIGVMIDDLVTKGTIEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G ++G + + R RF +++ L S+ L Sbjct: 429 YRLLTSRAEYRLILRHDNADMRLTEMGREIGLVDDERWARFEIKKNQFDNEMKRLDSIKL 488 Query: 484 ---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQIE 539 N + FK TA EFL P+ S Q++ + I P A +IE ++ E Sbjct: 489 KPVKETNAKVEEMGFKPLTDAVTAKEFLRRPEVSYQDVVAFIGPAAEDLDDKIIELIETE 548 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + M + +++ E++ IP + D+ + +++ E ++K ++ P + QAS+I Sbjct: 549 IKYEGYISKAMDQVAKMRRMEEKRIPANIDWDDIDSIATEARQKFKLINPETIGQASRIS 608 Query: 600 GMTPAALNLLLIYIK 614 G+ PA +++L++Y++ Sbjct: 609 GVNPADISILMVYLE 623 >gi|299143472|ref|ZP_07036552.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298517957|gb|EFI41696.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 631 Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust. Identities = 270/630 (42%), Positives = 387/630 (61%), Gaps = 35/630 (5%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DV+VIG GHAGCEAA AA++G TAL+ +I +MSCNP +GG GKGHLVREIDAL Sbjct: 12 FDVVVIGAGHAGCEAALAAARIGQKTALLCINLDSIAAMSCNPNVGGTGKGHLVREIDAL 71 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M R D IQ R+LN KGPAV R QAD+ Y +M+R I +QENL + + E Sbjct: 72 GGEMARNIDRTFIQSRMLNTSKGPAVHSLRAQADKRAYHDSMKRVIENQENLYLREAEAT 131 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + +++ + ++ TVV+ TGT+L+G +++G++ +G G P+N L +S Sbjct: 132 EIVIENKSVKAVITKTGAIYNTKTVVIATGTYLKGRVYMGEVNYASGPQGFQPANELSSS 191 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNRQIE-CGIT 243 K + RLKTGTPAR+ +I + E Q+ DE+++PFSF DK N Q E C +T Sbjct: 192 LEKEGLNLMRLKTGTPARVLRSSIDFSNMEVQYGDEKVVPFSFDNIDKDMNTQQEVCYLT 251 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 T E H +I +NI SA+Y GDI+ GPRYCPSIEDK++RF ++N HQ+F+EPEGL TD Sbjct: 252 YTTEECHELIKKNINRSALYLGDIEGVGPRYCPSIEDKVMRFSDKNAHQVFIEPEGLTTD 311 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G+S++LPEEIQ + I GLE I+R YAIEYD I+ L +LE +I G+ Sbjct: 312 EMYVQGVSSSLPEEIQLELYHKIKGLENCRIMRSAYAIEYDAIDATILKRSLEHMEIDGM 371 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQING++GYEEAA QGL+AGIN+A K + + +R+++YIGV+IDDL +KG EP Sbjct: 372 FFAGQINGSSGYEEAAGQGLIAGINAALKVQGKEPLILNRSEAYIGVLIDDLVTKGTREP 431 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRM T+RAEYR++LR DNAD RLT G +G + +Q+++ +Y+ + L+ L Sbjct: 432 YRMMTARAEYRLTLRQDNADLRLTQKGYDIGLV---KQEKYDRYVYRKENIEKELERLRE 488 Query: 484 TSKNLSSTSISFKQD------GKTRTAYEFLSYPD--FSIQNLFSICPDARKFSSLVIER 535 N + + ++ T + E + P+ + + N+F ER Sbjct: 489 IKVNPTEENNRILEELGSVPLKNTVSLAELIRRPELNYKLVNIFD------------KER 536 Query: 536 LQIESS----------YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 +QI Y Y +Q I+ + K E R + + DYS + L E +EKLS Sbjct: 537 VQIRDDIIEEVEIEIKYEGYIKKQQIQINQFKKLESRKLDINLDYSKIDGLRLEAREKLS 596 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 ++KP ++ QAS+I G++PA +N+LLIY+++ Sbjct: 597 LVKPESIGQASRITGVSPADINVLLIYLEQ 626 >gi|315221593|ref|ZP_07863513.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus anginosus F0211] gi|315189427|gb|EFU23122.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus anginosus F0211] Length = 638 Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust. Identities = 261/616 (42%), Positives = 372/616 (60%), Gaps = 6/616 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYD++VIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DA Sbjct: 8 SYDIVVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M + D IQ ++LN KGPAVR R QAD+ELY M++ + QENL + Q + Sbjct: 68 LGGEMAKNIDKTYIQMKMLNTGKGPAVRALRAQADKELYSKEMRKTVQHQENLTLRQTII 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + + VV+TTGT LRG I IG LK +G + +L + Sbjct: 128 DEILVENGKVVGVKTATHQEFAAQAVVVTTGTALRGEIIIGDLKYSSGPNHSLAAINLAD 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGI 242 + F+ GR KTGTP R+ +I +++T+ Q DE+ FS+ + + QI C + Sbjct: 188 NLRDLGFEIGRFKTGTPPRVKASSINYEETDIQPGDEKANHFSYTSHDEDYLKDQIPCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +H II N+ + ++SG +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG +T Sbjct: 248 TYTNGRSHEIIQNNLYRAPMFSGMVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRDT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q + +I GLE ++R GYAIEYD I P +L TLETKKISG Sbjct: 308 EEVYIQGLSTSLPEDVQKDLVHSIKGLENAELMRTGYAIEYDMIMPHQLRATLETKKISG 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQ NGT+GYEEAA QG+VAGINSA K + R+D YIGVMIDDL +KG +E Sbjct: 368 LFTAGQTNGTSGYEEAAGQGIVAGINSALKVQGKPELILKRSDGYIGVMIDDLVTKGTVE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYR+ TSRAEYR+ LR DNAD RLT IG ++G + + R RF +Y L ++ Sbjct: 428 PYRLLTSRAEYRLILRHDNADMRLTEIGRRVGLVDDERWLRFEIKKNQYETEMKRLSTIK 487 Query: 483 L---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQI 538 L N + FK TA EFL P+ S +++ + I P A +IE ++ Sbjct: 488 LKPIKETNEMVEKLGFKPLTDAVTAKEFLRRPEVSYEDVINFIGPAAEVLDEKIIELIET 547 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E Y Y + + + +++K E++ IP + D+ + +++ E ++K + P + QAS+I Sbjct: 548 EVKYEGYISKALDQVEKMKRMEEKRIPANIDWDDIDSIATEARQKFKKINPETIGQASRI 607 Query: 599 EGMTPAALNLLLIYIK 614 G+ PA +++L++Y++ Sbjct: 608 SGVNPADISILMVYLE 623 >gi|325286235|ref|YP_004262025.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Cellulophaga lytica DSM 7489] gi|324321689|gb|ADY29154.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Cellulophaga lytica DSM 7489] Length = 622 Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust. Identities = 277/630 (43%), Positives = 399/630 (63%), Gaps = 23/630 (3%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M ++ YDVIV+GGGHAG EAAA AA LG+ T L+T TIG MSCNPA+GG+ KG +VR Sbjct: 1 MFDKEYDVIVVGGGHAGAEAAAAAANLGSKTLLVTMNLQTIGQMSCNPAMGGIAKGQIVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADR----ELYRLAMQREILSQEN 116 EIDAL G G ++D + IQF++LN KGPA+ PRTQ DR E +RLA++R N Sbjct: 61 EIDALGGYSGIISDKSAIQFKMLNKSKGPAMWSPRTQNDRMRFAEEWRLALER----TPN 116 Query: 117 LDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGD 176 D Q V+G E + + + IR +VVLT GTFL G+IHIG+ ++ GR G+ Sbjct: 117 CDFYQEMVSGLIIEGDKVCGVTTSLGIEIRSKSVVLTNGTFLNGLIHIGERQLGGGRAGE 176 Query: 177 SPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP--FSFMTDKIT 234 + + + F++GR+KTGTP R+DG+++ + K Q D +IP FS+ K Sbjct: 177 KSATGITEQLVDLGFESGRMKTGTPPRVDGRSLDYSKMIVQPGD--VIPEKFSYTDTKSL 234 Query: 235 NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 Q +C +T T+ H ++ E S +++G IKS GPRYCPSIEDKI RF +++ HQ+F Sbjct: 235 AHQRDCFMTHTSTLVHDLLREGFDRSPMFNGRIKSLGPRYCPSIEDKINRFADKDKHQLF 294 Query: 295 LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT 354 +EPEG +T VY NG ST+LPE++Q + +R++ G E V RPGYAIEYDY P +L T Sbjct: 295 VEPEGWDTVEVYVNGFSTSLPEDVQFKALRSVVGFENVKFFRPGYAIEYDYFPPTQLKHT 354 Query: 355 LETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDD 414 LETK ++ L+ AGQINGTTGYEEAA+QGL+AGIN+ +K + + + +R ++YIGV+IDD Sbjct: 355 LETKLVNNLYFAGQINGTTGYEEAASQGLMAGINAHQKVKENEPLILNRDEAYIGVLIDD 414 Query: 415 LTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQE---- 470 L +KG EPYRMFTSRAEYR LR DNAD RLTP+G K+G + R KR + +Q+ Sbjct: 415 LITKGTEEPYRMFTSRAEYRTLLRQDNADIRLTPLGHKIGLASDSRLKRMEEKLQKSDAF 474 Query: 471 YNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNL-----FSICPDA 525 NF R S+V N S++ ++ ++ S P+ ++ ++ S +A Sbjct: 475 VNFFRE--TSVVPEDINPILESVNSTPVKQSHKMFKSFSRPNVTMDHMRKLKSVSEFIEA 532 Query: 526 RKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 V+E+ +I+ YA Y ++ A +++ E IP+ FDY L +LS E +EKL Sbjct: 533 ENIDREVMEQTEIQVKYAGYIAKEKNNADKLQRLENIKIPEGFDYRQLKSLSYEAREKLE 592 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 ++P + QAS+I G++P+ +++LL+++ + Sbjct: 593 AIRPVTISQASRISGVSPSDISVLLVFMGR 622 >gi|257899264|ref|ZP_05678917.1| glucose-inhibited division protein A [Enterococcus faecium Com15] gi|293572711|ref|ZP_06683675.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecium E980] gi|257837176|gb|EEV62250.1| glucose-inhibited division protein A [Enterococcus faecium Com15] gi|291607203|gb|EFF36561.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecium E980] Length = 633 Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust. Identities = 268/621 (43%), Positives = 381/621 (61%), Gaps = 9/621 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAG EAA AA++G+ T L+T + M CNP++GG KG +VREIDA Sbjct: 8 AYDVIVVGAGHAGSEAALAAARMGSKTLLLTINLDMVAFMPCNPSVGGPAKGVVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ R+LN KGPAVR R QAD+ Y M+ I + NL + QG V Sbjct: 68 LGGEMGKNIDKTYIQMRMLNTGKGPAVRALRAQADKHAYSTEMKHTIEKEPNLTLRQGIV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + +V + R VV+T GT LRG I IG+LK +G PS L N Sbjct: 128 EELIVEDGVCHGVVTSTGASYRAKAVVITAGTALRGEIIIGELKYSSGPNNSQPSIGLAN 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR--QIECGI 242 + F R KTGTP R+ TI + TE+Q D+ FSF T + Q C + Sbjct: 188 HLKELGFAIERFKTGTPPRVKSSTIDYSVTEEQPGDKEPNHFSFSTPDSAYKLDQESCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T T TH+II +N+ + +++G ++ G RYCPSIEDKIVRF ++ HQ+FLEPEGLNT Sbjct: 248 TYTGETTHQIIRDNLHRAPMFTGIVEGVGARYCPSIEDKIVRFADKPRHQLFLEPEGLNT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q + +I GLEKV ++R GYAIEYD + P +L PTLETK + Sbjct: 308 EEVYVQGLSTSLPEDVQVDMLHSIAGLEKVEMMRTGYAIEYDVVEPHQLRPTLETKVVEN 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQ NGT+GYEEAA QGL+AGIN+A K + + R+D YIGVMIDDL +KG E Sbjct: 368 LYTAGQTNGTSGYEEAAGQGLIAGINAALKVQGKEPLVIKRSDGYIGVMIDDLVTKGTNE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAK----YIQEYNFLRSL- 477 PYR+ TSRAEYR+ LR DNAD RLT +G ++G + E + K + K QE L ++ Sbjct: 428 PYRLLTSRAEYRLLLRHDNADLRLTEMGHRVGLVKEDQYKAYLKKKEAVEQEIKRLMNVR 487 Query: 478 LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 +K L++ + + +DG A +FL P+ + +L P+ + + IE+++ Sbjct: 488 IKPTEEVQAFLATINAAPLKDGV--LASDFLRRPEITYADLLRFIPENEELTRKEIEQVE 545 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ Y Y + M + +++K E + IP++ DY+++ L+ E K+KL ++P + QAS+ Sbjct: 546 IQIKYEGYIKKAMEKVEKLKRMEAKKIPENIDYAAINGLATEAKQKLQKIQPETIAQASR 605 Query: 598 IEGMTPAALNLLLIYIKKNTV 618 I G+ PA L++L++YI++ + Sbjct: 606 ISGVNPADLSILMVYIEQGKI 626 >gi|261206910|ref|ZP_05921599.1| glucose-inhibited division protein A subfamily [Enterococcus faecium TC 6] gi|289567291|ref|ZP_06447670.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecium D344SRF] gi|293553540|ref|ZP_06674167.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecium E1039] gi|294616666|ref|ZP_06696437.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecium E1636] gi|260078538|gb|EEW66240.1| glucose-inhibited division protein A subfamily [Enterococcus faecium TC 6] gi|289160910|gb|EFD08831.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecium D344SRF] gi|291590486|gb|EFF22224.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecium E1636] gi|291602295|gb|EFF32520.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecium E1039] Length = 633 Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust. Identities = 268/621 (43%), Positives = 381/621 (61%), Gaps = 9/621 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAG EAA AA++G+ T L+T + M CNP++GG KG +VREIDA Sbjct: 8 AYDVIVVGAGHAGSEAALAAARMGSKTLLLTINLDMVAFMPCNPSVGGPAKGVVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ R+LN KGPAVR R QAD+ Y M+ I + NL + QG V Sbjct: 68 LGGEMGKNIDKTYIQMRMLNTGKGPAVRALRAQADKHAYSTEMKHTIEKEPNLTLRQGIV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + +V + R VV+T GT LRG I IG+LK +G PS L N Sbjct: 128 EELIVEDGVCHGVVTSTGASYRAKAVVITAGTALRGEIIIGELKYSSGPNNSQPSIGLAN 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR--QIECGI 242 + F R KTGTP R+ TI + TE+Q D+ FSF T + Q C + Sbjct: 188 HLKELGFAIERFKTGTPPRVKSSTIDYSVTEEQPGDKEPNHFSFSTPDSAYKLDQESCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T T TH+II +N+ + +++G ++ G RYCPSIEDKIVRF ++ HQ+FLEPEGLNT Sbjct: 248 TYTGETTHQIIRDNLHRAPMFTGIVEGVGARYCPSIEDKIVRFADKPRHQLFLEPEGLNT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q + +I GLEKV ++R GYAIEYD + P +L PTLETK + Sbjct: 308 EEVYVQGLSTSLPEDVQVNMLHSIAGLEKVEMMRTGYAIEYDVVEPHQLRPTLETKVVEN 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQ NGT+GYEEAA QGL+AGIN+A K + + R+D YIGVMIDDL +KG E Sbjct: 368 LYTAGQTNGTSGYEEAAGQGLIAGINAALKVQGKEPLVIKRSDGYIGVMIDDLVTKGTNE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAK----YIQEYNFLRSL- 477 PYR+ TSRAEYR+ LR DNAD RLT +G ++G + E + K + K QE L ++ Sbjct: 428 PYRLLTSRAEYRLLLRHDNADLRLTEMGHRVGLVKEDQYKNYLKKKEAVEQEIKRLMNVR 487 Query: 478 LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 +K L++ + + +DG A +FL P+ + +L P+ + + IE+++ Sbjct: 488 IKPTEEVQDFLATINAAPLKDGV--LASDFLRRPEITYADLLRFIPENEELTRKEIEQVE 545 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ Y Y + M + +++K E + IP++ DY+++ L+ E K+KL ++P + QAS+ Sbjct: 546 IQIKYEGYIKKAMEKVEKLKRMEAKKIPENIDYAAINGLATEAKQKLQKIQPETIAQASR 605 Query: 598 IEGMTPAALNLLLIYIKKNTV 618 I G+ PA L++L++YI++ + Sbjct: 606 ISGVNPADLSILMVYIEQGKI 626 >gi|15902168|ref|NP_357718.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae R6] gi|116515312|ref|YP_815647.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae D39] gi|149005876|ref|ZP_01829605.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA(glucose-inhibited division protein A) [Streptococcus pneumoniae SP18-BS74] gi|149017801|ref|ZP_01834260.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA(glucose-inhibited division protein A) [Streptococcus pneumoniae SP23-BS72] gi|73621004|sp|Q8DRH8|MNMG_STRR6 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|122279465|sp|Q04MU9|MNMG_STRP2 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|15457663|gb|AAK98928.1| Glucose inhibited division protein A [Streptococcus pneumoniae R6] gi|116075888|gb|ABJ53608.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA(glucose-inhibited division protein A) [Streptococcus pneumoniae D39] gi|147762232|gb|EDK69193.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA(glucose-inhibited division protein A) [Streptococcus pneumoniae SP18-BS74] gi|147931365|gb|EDK82343.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA(glucose-inhibited division protein A) [Streptococcus pneumoniae SP23-BS72] Length = 637 Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust. Identities = 259/615 (42%), Positives = 371/615 (60%), Gaps = 6/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DAL Sbjct: 9 YDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + D IQ ++LN KGPAVR R QAD+ELY M++ + +QENL + Q + Sbjct: 69 GGEMAKTIDKTYIQMKMLNTGKGPAVRALRAQADKELYSKEMRKTVENQENLTLRQTMID 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V++TTGT LRG I IG LK +G S +L ++ Sbjct: 129 EILVEDGKAVGVRTATHQEYAAKAVIVTTGTALRGEIIIGDLKYSSGPNHSLASINLADN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 + + GR KTGTP R+ +I +D TE Q DE FS+ + + Q+ C +T Sbjct: 189 LKELGLEIGRFKTGTPPRVKASSINYDVTEIQPGDEVPNHFSYTSRDEDYVKDQVPCWLT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +H II N+ + +++G +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG NT+ Sbjct: 249 YTNGTSHEIIQNNLHRAPMFTGVVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRNTE 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE++Q + +I GLE ++R GYAIEYD + P +L TLETKKISGL Sbjct: 309 EVYVQGLSTSLPEDVQRDLVHSIKGLENAEMMRTGYAIEYDMVLPHQLRATLETKKISGL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMIDDL +KG +EP Sbjct: 369 FTAGQTNGTSGYEEAAGQGIIAGINAALKIQGKPELILKRSDGYIGVMIDDLVTKGTIEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G ++G + + R RF +++ L S+ L Sbjct: 429 YRLLTSRAEYRLILRHDNADMRLTEMGREIGLVDDERWARFEIKKNQFDNEMKRLDSIKL 488 Query: 484 ---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQIE 539 N + FK TA EFL P+ S Q++ + I P A + +IE ++ E Sbjct: 489 KPVKETNAKVEEMGFKPLTDAVTAKEFLRRPEVSYQDVVAFIGPAAEELDDKIIELIETE 548 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + M + ++K E++ IP + D+ + +++ E ++K ++ P + QAS+I Sbjct: 549 IKYEGYISKAMDQVAKMKRMEEKRIPANIDWDDIDSIATEARQKFKLINPETIGQASRIS 608 Query: 600 GMTPAALNLLLIYIK 614 G+ PA +++L++Y++ Sbjct: 609 GVNPADISILMVYLE 623 >gi|194335189|ref|YP_002016983.1| glucose inhibited division protein A [Pelodictyon phaeoclathratiforme BU-1] gi|194307666|gb|ACF42366.1| glucose inhibited division protein A [Pelodictyon phaeoclathratiforme BU-1] Length = 621 Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust. Identities = 271/624 (43%), Positives = 370/624 (59%), Gaps = 18/624 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IV G GHAGCEAA AA++G+S LI+ + I MSCNPAIGG+ KG + REIDAL Sbjct: 2 YDIIVTGAGHAGCEAALSAARMGSSCLLISSDLTAIARMSCNPAIGGVAKGQITREIDAL 61 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + DA GIQFR+LN KGPA+ PR QADR LY L M+ I + N+D++Q V Sbjct: 62 GGEMAKAIDATGIQFRMLNRSKGPAMHSPRAQADRTLYSLYMRNVIEKEANIDLLQDTVV 121 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGR-MGDSPSNSLFN 184 G S + + +I T +L+ GTFL G+IHIG GR + + P L Sbjct: 122 GIECSGGAFSGVRLMSGRIINGRTAILSCGTFLNGLIHIGMNHYAGGRTIAEPPVYGLTE 181 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGIT 243 +K+ F GRLKTGTPAR+D +++ +D E+Q D I FSF + NR QI C +T Sbjct: 182 DLVKYGFAAGRLKTGTPARIDARSVEYDLVEEQSGDPLPISFSFRNTPVINRHQISCFVT 241 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 +T TH I+ + S ++SG ++ GPRYCPSIEDKI RF +++ H IFLEPEG +T+ Sbjct: 242 KTTKATHEILKKGFDRSPLFSGKVQGIGPRYCPSIEDKICRFPDKDSHHIFLEPEGFDTN 301 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y NG ST+LPEEIQ + ++++PGL V +IRPGYAIEYDY P ++ +LETK + L Sbjct: 302 EMYVNGFSTSLPEEIQLEALQSLPGLRNVKMIRPGYAIEYDYFFPYQINRSLETKLVKNL 361 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGT+GYEEAAAQGL+AGIN+ + R+D+YIGV+IDDL +K EP Sbjct: 362 FFAGQINGTSGYEEAAAQGLIAGINATLLLRGRAPLHLKRSDAYIGVLIDDLVTKETNEP 421 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTS AE+R+ LR DNAD RL G I F+ + + + L L L Sbjct: 422 YRMFTSSAEHRLLLRHDNADIRLCHHAKSAGLID---ADTFSDCTNKKRLIDT-LNQLCL 477 Query: 484 TSK------NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNL------FSICPDARKFSSL 531 +K N + T++A L P L F A L Sbjct: 478 DTKIKPDVANTLLAGLGHPPVTTTQSAVNLLKKPGVHFHMLLESALSFKESVYAVTDDPL 537 Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 V E+++I+ Y Y R ++ A++I + IP F Y + LSNE +EKL L+P Sbjct: 538 VFEQVEIDLKYEGYLKRDLLMAEKILRLDLHEIPASFRYDHVTGLSNEGREKLMKLRPET 597 Query: 592 LLQASKIEGMTPAALNLLLIYIKK 615 + QAS+I G++P+ +++L+I + + Sbjct: 598 IGQASRILGVSPSDISVLMIRLGR 621 >gi|257878639|ref|ZP_05658292.1| glucose-inhibited division protein A [Enterococcus faecium 1,230,933] gi|257881305|ref|ZP_05660958.1| glucose-inhibited division protein A [Enterococcus faecium 1,231,502] gi|293569166|ref|ZP_06680472.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecium E1071] gi|294619738|ref|ZP_06699143.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecium E1679] gi|294623752|ref|ZP_06702580.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecium U0317] gi|314940138|ref|ZP_07847318.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecium TX0133a04] gi|314943031|ref|ZP_07849835.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecium TX0133C] gi|314953437|ref|ZP_07856355.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecium TX0133A] gi|314993824|ref|ZP_07859160.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecium TX0133B] gi|314998151|ref|ZP_07863033.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecium TX0133a01] gi|257812867|gb|EEV41625.1| glucose-inhibited division protein A [Enterococcus faecium 1,230,933] gi|257816963|gb|EEV44291.1| glucose-inhibited division protein A [Enterococcus faecium 1,231,502] gi|291588135|gb|EFF19977.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecium E1071] gi|291594008|gb|EFF25477.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecium E1679] gi|291596706|gb|EFF27929.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecium U0317] gi|313587863|gb|EFR66708.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecium TX0133a01] gi|313591715|gb|EFR70560.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecium TX0133B] gi|313594540|gb|EFR73385.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecium TX0133A] gi|313598231|gb|EFR77076.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecium TX0133C] gi|313640643|gb|EFS05223.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecium TX0133a04] Length = 633 Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust. Identities = 268/621 (43%), Positives = 380/621 (61%), Gaps = 9/621 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAG EAA AA++G+ T L+T + M CNP++GG KG +VREIDA Sbjct: 8 AYDVIVVGAGHAGSEAALAAARMGSKTLLLTINLDMVAFMPCNPSVGGPAKGVVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ R+LN KGPAVR R QAD+ Y M+ I + NL + QG V Sbjct: 68 LGGEMGKNIDKTYIQMRMLNTGKGPAVRALRAQADKHAYSTEMKHTIEKEPNLTLRQGIV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + +V + R VV+T GT LRG I IG+LK +G PS L N Sbjct: 128 EELIVEDGVCHGVVTSTGASYRAKAVVITAGTALRGEIIIGELKYSSGPNNSQPSIGLAN 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR--QIECGI 242 + F R KTGTP R+ TI + TE+Q D+ FSF T + Q C + Sbjct: 188 HLKELGFAIERFKTGTPPRVKSSTIDYSVTEEQPGDKEPNHFSFSTPDSAYKLDQESCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T T TH+II +N+ + +++G ++ G RYCPSIEDKIVRF ++ HQ+FLEPEGLNT Sbjct: 248 TYTGETTHQIIRDNLHRAPMFTGIVEGVGARYCPSIEDKIVRFADKPRHQLFLEPEGLNT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q + +I GLEKV ++R GYAIEYD + P +L PTLETK + Sbjct: 308 EEVYVQGLSTSLPEDVQVNMLHSIAGLEKVEMMRTGYAIEYDVVEPHQLRPTLETKVVEN 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQ NGT+GYEEAA QGL+AGIN+A K + + R+D YIGVMIDDL +KG E Sbjct: 368 LYTAGQTNGTSGYEEAAGQGLIAGINAALKVQGKEPLVIKRSDGYIGVMIDDLVTKGTNE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAK----YIQEYNFLRSL- 477 PYR+ TSRAEYR+ LR DNAD RLT +G ++G + E + K + K QE L ++ Sbjct: 428 PYRLLTSRAEYRLLLRHDNADLRLTEMGHRVGLVKEDQYKNYLKKKEAVEQEIKRLMNVR 487 Query: 478 LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 +K L++ + + +DG A +FL P+ + L P+ + + IE+++ Sbjct: 488 IKPTEEVQDFLATINAAPLKDGV--LASDFLRRPEITYAELLRFIPENEELTRKEIEQVE 545 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ Y Y + M + +++K E + IP++ DY+++ L+ E K+KL ++P + QAS+ Sbjct: 546 IQIKYEGYIKKAMEKVEKLKRMEAKKIPENIDYAAINGLATEAKQKLQKIQPETIAQASR 605 Query: 598 IEGMTPAALNLLLIYIKKNTV 618 I G+ PA L++L++YI++ + Sbjct: 606 ISGVNPADLSILMVYIEQGKI 626 >gi|156840659|ref|XP_001643709.1| hypothetical protein Kpol_507p13 [Vanderwaltozyma polyspora DSM 70294] gi|156114331|gb|EDO15851.1| hypothetical protein Kpol_507p13 [Vanderwaltozyma polyspora DSM 70294] Length = 664 Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust. Identities = 258/598 (43%), Positives = 384/598 (64%), Gaps = 14/598 (2%) Query: 31 TALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPA 90 T L+T + IG+ SCNP++GG+GKG L+RE+DALDG+ R+ D AGIQF++LN +G A Sbjct: 63 TTLVTPFLNKIGTCSCNPSMGGVGKGILLREVDALDGVAARITDKAGIQFKMLNRSRGAA 122 Query: 91 VRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGF--------NTEKNIISSIVMQDN 142 V GPR Q DR LY L MQ+E+ + NL++ + +V + + I ++++D Sbjct: 123 VWGPRAQLDRSLYLLEMQKELFNYPNLNLKEAKVKDIIIDSRQKGDEKYGSIKGLILEDG 182 Query: 143 SMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPA 202 S+++ S VV+TTGTFL G IHIG PAGR+G+ P+ + ++ F GRLKTGTPA Sbjct: 183 SLLKTSKVVITTGTFLGGEIHIGLKSFPAGRIGEEPTFGISSTLNDAGFKLGRLKTGTPA 242 Query: 203 RLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITRTNLETHRIIMENIKHSA 261 RL+ +I + EKQ+ DE P SFM ++++ + QI C TRT E H I N+ H A Sbjct: 243 RLEKSSIDFTNLEKQYGDEVPHPMSFMNNEVSIKDQILCYGTRTTTELHEYIRTNL-HQA 301 Query: 262 IYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQ 321 ++ + GPRYCPSIE KI+RF ++ H+I+LEPEG+++++VYPNGIS ++PE++Q Sbjct: 302 LHIRETVK-GPRYCPSIEAKILRFPDKESHKIWLEPEGIDSNIVYPNGISNSMPEDVQET 360 Query: 322 FIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQ 381 +R +PGLE V I++P Y +EYDY++P++L +LETK I GLFLAGQINGTTGYEEA AQ Sbjct: 361 MLRMVPGLENVKILQPAYGVEYDYVDPRQLKSSLETKLIDGLFLAGQINGTTGYEEACAQ 420 Query: 382 GLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDN 441 G VAGIN+ S + R++SYIGV+IDDL +KG+ EPYRMFTSR+E+RI++R DN Sbjct: 421 GTVAGINAGLSSLGKPPLKLLRSNSYIGVLIDDLITKGIDEPYRMFTSRSEFRITVRADN 480 Query: 442 ADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKT 501 AD RLT +G K G I ++R +F+K + LK+ + S S + Sbjct: 481 ADLRLTELGYKSGVISDKRWSQFSKDRDLFEDTIYKLKNYQRSFTKWRSMDPSLPDTPNS 540 Query: 502 RTAYEFLSYPDFSIQNLF---SICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKF 558 + ++ L Y +I+ L + + V+ +++++ Y Y +Q K + Sbjct: 541 ISGWDLLRYQTVTIETLLKNMDAMINMDDIPNHVLLKIEVQGKYEPYMHKQRQYIKAFQA 600 Query: 559 EEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKN 616 +E L+PK+FDYS +P+LS+E K L++++P + QA +I+G+T A+L L +++N Sbjct: 601 DEDMLLPKNFDYSLVPSLSSESKALLNLIQPETIGQARRIQGITAASLFELYRLVRRN 658 >gi|270289897|ref|ZP_06196123.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pediococcus acidilactici 7_4] gi|304385850|ref|ZP_07368194.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pediococcus acidilactici DSM 20284] gi|270281434|gb|EFA27266.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pediococcus acidilactici 7_4] gi|304328354|gb|EFL95576.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pediococcus acidilactici DSM 20284] Length = 635 Score = 496 bits (1277), Expect = e-138, Method: Compositional matrix adjust. Identities = 275/633 (43%), Positives = 379/633 (59%), Gaps = 28/633 (4%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R YDVIV+G GHAG EAA AA++G T L+T + M CNP+IGG KG +VREID Sbjct: 10 RDYDVIVVGAGHAGSEAALAAARMGNKTLLMTINLDMVAFMPCNPSIGGPAKGIVVREID 69 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G MGR D +Q R+LN KGPAVR R QAD+ Y M++ I ++ NL + QG Sbjct: 70 ALGGEMGRNIDKTYVQMRMLNTGKGPAVRALRAQADKHAYHAEMKKTIEAEPNLTLRQGI 129 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + ++ + +VVLT GT RG I IG+L+ +G P+NS Sbjct: 130 VDDLIVEDGVCKGVITNTGARYHAKSVVLTLGTAARGKIIIGELQYSSG-----PNNSQA 184 Query: 184 ------NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--- 234 N K+ F+ R KTGTP R+DG TI + +TE+Q DE FSF T Sbjct: 185 ALELTKNLTEKYHFELERFKTGTPPRVDGGTIHYAETEEQPGDEEPNHFSFQTPDSKYLE 244 Query: 235 -NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQI 293 Q+ C +T TN +TH II EN+ + ++SG I+ GPRYCPSIEDKIVRF +++ HQ+ Sbjct: 245 LKNQLSCWLTYTNEKTHEIIRENLSRAPMFSGVIEGVGPRYCPSIEDKIVRFADKDRHQL 304 Query: 294 FLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFP 353 FLEPEG TD Y G+ST++PEE+Q Q + +I GLE ++RPGYAIEYD + P +L Sbjct: 305 FLEPEGRKTDEWYVQGLSTSMPEEVQQQILHSIKGLEDAEMMRPGYAIEYDVVAPYQLKN 364 Query: 354 TLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMID 413 TLETK I L+ AGQ NGT+GYEEAA QGL+AGIN+ R++ + R+D+YIGVMID Sbjct: 365 TLETKLIKNLYTAGQTNGTSGYEEAAGQGLIAGINAGRRALGQEPFTLKRSDAYIGVMID 424 Query: 414 DLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNF 473 DL +KG EPYR+ TSRAEYR+ LR DNAD RLT +G LG + E + +A ++Q+ Sbjct: 425 DLVTKGTKEPYRLLTSRAEYRLILRHDNADLRLTEMGHDLGLVSE---EEYAAFLQKKAD 481 Query: 474 LRSLLKSLV-------LTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDAR 526 ++ L L + L S +DG A EFL P+ + +L P + Sbjct: 482 IQDELHRLEQIRIKPGQVKEFLESKGSHGLKDGV--LAAEFLRRPEVTYADLLKFIPASE 539 Query: 527 K-FSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 K V+E+++IE YA Y + +K E ++IP DY+++ L+ E ++KL Sbjct: 540 KQLDRRVVEQVEIEIKYAGYIKKAQERVDRLKKMEAKVIPDRIDYNAISGLATEGRQKLE 599 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYIKKNTV 618 ++P + QAS+I G+TPA + +L +YI++ + Sbjct: 600 KIRPTTIAQASRISGVTPADIAILSVYIQQGKI 632 >gi|313893561|ref|ZP_07827131.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Veillonella sp. oral taxon 158 str. F0412] gi|313442004|gb|EFR60426.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Veillonella sp. oral taxon 158 str. F0412] Length = 623 Score = 496 bits (1277), Expect = e-138, Method: Compositional matrix adjust. Identities = 264/617 (42%), Positives = 380/617 (61%), Gaps = 10/617 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIGGGHAGCEAA AA++G T + T I M CNPA+GG GK HLV E+DA Sbjct: 6 NYDVIVIGGGHAGCEAALAAARMGHRTLMATISLDNIALMPCNPAVGGPGKSHLVYELDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG ADA IQ R+LN+ KGPAV R Q+D+ Y+ M++ I + ENL+V Q V Sbjct: 66 LGGQMGINADATAIQMRMLNMGKGPAVHSLRCQSDKIKYQHLMKQTIENTENLNVKQIMV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ IV + VVL TGT+L+G I IG + G G + Sbjct: 126 TELKVEDGKVTGIVTELGEFYGAKAVVLCTGTYLKGKILIGDIDYVGGPNGQRVAEHFSQ 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S + + R KTGTPAR+D +T+ + E Q D FSFM + I + C +T Sbjct: 186 SLLDNGIELMRFKTGTPARVDKRTLNLENMEVQEGDIHHHSFSFMDEWINRNEDVCWLTY 245 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN ETH II NI + +YSG I+ GPRYCPSIEDK+VRF ++ HQ+F+EPEG T+ Sbjct: 246 TNKETHEIITSNIHRAPMYSGKIEGVGPRYCPSIEDKVVRFADKERHQLFVEPEGTGTNE 305 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+ST+LP ++Q+ F+RTIPGLE V I+RP YAIEYD +NP +L P L+ K I GL+ Sbjct: 306 MYVQGMSTSLPMDVQYAFLRTIPGLENVEIMRPAYAIEYDCLNPTQLTPALQVKHIEGLY 365 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ NGT+GYEEAAAQGL+AGIN+A + +R+++YIGV+IDDL +KG EPY Sbjct: 366 SAGQANGTSGYEEAAAQGLMAGINAALWIEGKEPFILARSEAYIGVLIDDLVTKGTNEPY 425 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSR+EYR+ LR DNAD RLT G ++G + + R +F LL++ + Sbjct: 426 RMMTSRSEYRLLLRQDNADMRLTEKGREIGLVKDDRWDKFTAKKANIEEAMELLRNTPVN 485 Query: 485 SKNLSSTSISFKQDGKTRT---AYEFLSYPDFSIQNLFSICPDA---RKFSSLVIERLQI 538 + + RT AY+ + + S +++ DA ++++ V E + I Sbjct: 486 PSKETQALLESLGTAPIRTGIHAYDLVKRNELS----YAVVADAFGLKRYTPDVEEAVDI 541 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 +Y Y +QM + +++ E++++PK++DY+ + +S E ++KL+ ++P ++ QAS+I Sbjct: 542 SITYEGYIKKQMDQVDKVRKLEEKILPKEWDYTEIKGISLEAQQKLNKIRPHSIGQASRI 601 Query: 599 EGMTPAALNLLLIYIKK 615 G++PA +++LLI +++ Sbjct: 602 SGVSPADVSVLLIQLEQ 618 >gi|332204145|gb|EGJ18210.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae GA47901] Length = 637 Score = 496 bits (1277), Expect = e-138, Method: Compositional matrix adjust. Identities = 259/615 (42%), Positives = 371/615 (60%), Gaps = 6/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DAL Sbjct: 9 YDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + D IQ ++LN KGPAVR R QAD+ELY M++ + +QENL + Q + Sbjct: 69 GGEMAKTIDKTYIQMKMLNTGKGPAVRALRAQADKELYSKEMRKTVENQENLTLRQTMID 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + V++TTGT LRG I IG LK +G S +L ++ Sbjct: 129 EILVEDGKVVGVRTATHQEYAAKAVIVTTGTALRGEIIIGDLKYSSGPNHSLASINLADN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 + + GR KTGTP R+ +I +D TE Q DE FS+ + + Q+ C +T Sbjct: 189 LKELGLEIGRFKTGTPPRVKASSINYDVTEIQPGDEVPNHFSYTSRDEDYVKDQVPCWLT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +H II N+ + +++G +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG NT+ Sbjct: 249 YTNGTSHEIIQNNLHRAPMFTGVVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRNTE 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE++Q + +I GLE ++R GYAIEYD + P +L TLETKKISGL Sbjct: 309 EVYVQGLSTSLPEDVQRDLVHSIKGLENAEMMRTGYAIEYDMVLPHQLRATLETKKISGL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMIDDL +KG +EP Sbjct: 369 FTAGQTNGTSGYEEAAGQGIIAGINAALKIQGKPELILKRSDGYIGVMIDDLVTKGTIEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G ++G + + R RF +++ L S+ L Sbjct: 429 YRLLTSRAEYRLILRHDNADIRLTEMGREIGLVDDERWARFEIKKNQFDNEMKRLDSIKL 488 Query: 484 ---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQIE 539 N + FK TA EFL P+ S Q++ + I P A +IE ++ E Sbjct: 489 KPVKETNAKVEEMGFKPLTDAVTAKEFLRRPEVSYQDVVAFIGPAAEDLDDKIIELIETE 548 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + M + ++K E++ IP + D+ + +++ E ++K ++ P + QAS+I Sbjct: 549 IKYEGYISKAMDQVAKMKRMEEKRIPANIDWDDIDSIATEARQKFKLINPETIGQASRIS 608 Query: 600 GMTPAALNLLLIYIK 614 G+ PA +++L++Y++ Sbjct: 609 GVNPADISILMVYLE 623 >gi|312952944|ref|ZP_07771800.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis TX0102] gi|310629085|gb|EFQ12368.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis TX0102] Length = 632 Score = 496 bits (1277), Expect = e-138, Method: Compositional matrix adjust. Identities = 272/630 (43%), Positives = 386/630 (61%), Gaps = 16/630 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+G GHAG EAA AA++G T L+T + M CNP++GG KG +VREIDA Sbjct: 8 SYDVIVVGAGHAGSEAALAAARMGVKTLLLTINLDMVAFMPCNPSVGGPAKGVVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ R+LN KGPAVR R QAD+ Y M+ I +ENL + QG V Sbjct: 68 LGGEMGKNIDKTYIQMRMLNTGKGPAVRALRAQADKHAYATEMKHTIEKEENLTLRQGIV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + +V + R VV+T GT LRG I IG+LK +G PS L N Sbjct: 128 EELIVEDGVCRGVVTSTGAAYRSQAVVITAGTALRGEIIIGELKYSSGPNNSQPSVGLAN 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNRQIE-CGI 242 + + R KTGTP R+ TI + TE+Q D+ FS+ T D N+ E C + Sbjct: 188 HLKELGLEIDRFKTGTPPRVKSSTIDYSVTEEQPGDKEPNHFSYSTPDSAYNQNQEPCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II +N+ + +++G ++ G RYCPSIEDKIVRF ++ HQ+FLEPEGLNT Sbjct: 248 TYTNETTHEIIQKNLHRAPMFTGIVEGVGARYCPSIEDKIVRFADKPRHQLFLEPEGLNT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q + + +I GLEKV ++R GYAIEYD + P +L PTLETK I Sbjct: 308 EEVYVQGLSTSLPEDVQTEMLHSIEGLEKVEMMRTGYAIEYDVVVPHQLRPTLETKVIEN 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQ NGT+GYEEAA QGL+AGIN+A K + + R+D YIGVMIDDL +KG E Sbjct: 368 LYTAGQTNGTSGYEEAAGQGLMAGINAALKIQGKEPLVLKRSDGYIGVMIDDLVTKGTNE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRS----LL 478 PYR+ TSRAEYR+ LR DNAD RLT +G ++G + +++++A Y+ + + + L Sbjct: 428 PYRLLTSRAEYRLILRHDNADLRLTEMGHEIGLV---KEEQYAAYLVKKAAVEAEIARLG 484 Query: 479 KSLVLTSKN----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARK-FSSLVI 533 K + +K L + + +DG A +FL P+ S Q + P + VI Sbjct: 485 KHRIKPTKEVQAFLETKGAAGLKDGI--LARDFLKRPEISYQEVAQFIPAPEEALDPKVI 542 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I+ Y Y + M + +++K E + IP++ DY ++ L+ E K+KL ++P + Sbjct: 543 EQVEIQIKYEGYIKKAMEKVEKLKRMEAKRIPENIDYQAINGLATEAKQKLQKIQPETIA 602 Query: 594 QASKIEGMTPAALNLLLIYIKKNTVKLNEI 623 QAS+I G+ PA +++L++YI++ + E+ Sbjct: 603 QASRISGVNPADISILMVYIEQGKIAKVEV 632 >gi|306821810|ref|ZP_07455405.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550177|gb|EFM38173.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 626 Score = 496 bits (1277), Expect = e-138, Method: Compositional matrix adjust. Identities = 261/620 (42%), Positives = 387/620 (62%), Gaps = 15/620 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAGCE+A AA++G +T +IT ++G + CNP+IGG GKGHLV+EIDA Sbjct: 7 NYDVIVVGAGHAGCESALAAARMGLNTLIITLSLESVGYLPCNPSIGGTGKGHLVKEIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG AD IQ R+LN KGPAV R Q D++ YR M++ + Q+NLD+ EV Sbjct: 67 LGGQMGISADKTFIQSRMLNTSKGPAVHSLRVQCDKDKYRAYMKKVLEDQKNLDIKMDEV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + + +V + + V++ TG +L ++IG++ +G +G + + L Sbjct: 127 VEILASDDKVDGVVTKLGAKYGAKAVIIATGVYLDSKVYIGEVNFKSGPLGLTGAYELSK 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK--ITNRQIECGI 242 S K + + KTGTPAR+ +I + K Q DE++ PFSF+ + I QI+C + Sbjct: 187 SIEKLGIEMRKFKTGTPARIHQDSIDFTKMTLQEGDEKITPFSFINEGEYIGENQIDCYL 246 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSY-GPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 TRTNL+TH II EN+ S+++ GD+ + G RYCPSIEDK+ RF +++ HQ F+EPEGL+ Sbjct: 247 TRTNLKTHGIINENLNRSSLFRGDMDAIAGARYCPSIEDKVTRFADKSSHQFFVEPEGLD 306 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T Y G S++L E+Q + RT+ GLE ++RP YAIEYD I+P +L TLETKKIS Sbjct: 307 TKEYYIQGFSSSLAYEVQLEMYRTVAGLENCRMMRPAYAIEYDCIDPMQLKMTLETKKIS 366 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GL+ AGQ+N T+GYEEAAAQG+VAGIN+A K + +R +SYIGV+IDDL +KG Sbjct: 367 GLYFAGQMNSTSGYEEAAAQGIVAGINAAAKIQGKAEMILTRDNSYIGVLIDDLVTKGTN 426 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAEYR+ LR DNAD RLT IG +G + + +R+ K+I++Y + ++ L Sbjct: 427 EPYRIMTSRAEYRLLLRQDNADERLTQIGRDMGLVDD---ERYDKFIKKYKNIEKEIQRL 483 Query: 482 -------VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIE 534 + ++ L T IS + ++ + YE L P+ + L + S+ + Sbjct: 484 KNEKIKPIQINEKL--TEISESELSQSISLYELLKRPNVTYAFLEENGFGNDEISNEIKL 541 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 R +IES Y Y +Q ++ + K E + + DY + L E ++KL +KP N+ Q Sbjct: 542 RCEIESKYEGYIKKQRLQVENFKNLENKKLSSAIDYEQIKGLRLEARQKLMTIKPENIGQ 601 Query: 595 ASKIEGMTPAALNLLLIYIK 614 AS+I G++P+ +++LL+Y++ Sbjct: 602 ASRISGVSPSDISVLLVYLQ 621 >gi|256963960|ref|ZP_05568131.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis HIP11704] gi|307273988|ref|ZP_07555198.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis TX0855] gi|256954456|gb|EEU71088.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis HIP11704] gi|306509296|gb|EFM78356.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis TX0855] Length = 632 Score = 496 bits (1277), Expect = e-138, Method: Compositional matrix adjust. Identities = 271/625 (43%), Positives = 384/625 (61%), Gaps = 16/625 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+G GHAG EAA AA++G T L+T + M CNP++GG KG +VREIDA Sbjct: 8 SYDVIVVGAGHAGSEAALAAARMGVKTLLLTINLDMVAFMPCNPSVGGPAKGVVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ R+LN KGPAVR R QAD+ Y M+ I +ENL + QG V Sbjct: 68 LGGEMGKNIDKTYIQMRMLNTGKGPAVRALRAQADKHAYATEMKHTIEKEENLTLRQGIV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + +V + R VV+T GT LRG I IG+LK +G PS L N Sbjct: 128 EELIVEDGVCRGVVTSTGAAYRSQAVVITAGTALRGEIIIGELKYSSGPNNSQPSVGLAN 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNRQIE-CGI 242 + + R KTGTP R+ TI + TE+Q D+ FS+ T D N+ E C + Sbjct: 188 HLKELGLEIDRFKTGTPPRVKSSTIDYSVTEEQPGDKEPNHFSYSTPDSAYNQNQEPCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II +N+ + +++G ++ G RYCPSIEDKIVRF ++ HQ+FLEPEGLNT Sbjct: 248 TYTNETTHEIIQKNLHRAPMFTGIVEGVGARYCPSIEDKIVRFADKPRHQLFLEPEGLNT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q + + +I GLEKV ++R GYAIEYD + P +L PTLETK I Sbjct: 308 EEVYVQGLSTSLPEDVQTEMLHSIEGLEKVEMMRTGYAIEYDVVVPHQLRPTLETKVIEN 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQ NGT+GYEEAA QGL+AGIN+A K + + R+D YIGVMIDDL +KG E Sbjct: 368 LYTAGQTNGTSGYEEAAGQGLMAGINAALKIQSKEPLVLKRSDGYIGVMIDDLVTKGTNE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRS----LL 478 PYR+ TSRAEYR+ LR DNAD RLT +G ++G + +++++A Y+ + + + L Sbjct: 428 PYRLLTSRAEYRLILRHDNADLRLTEMGHEIGLV---KEEQYAAYLVKKAAVEAEIARLG 484 Query: 479 KSLVLTSKN----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARK-FSSLVI 533 K + +K L + + +DG A +FL P+ S Q + P + VI Sbjct: 485 KHRIKPTKEVQAFLETKGAAGLKDGI--LARDFLKRPEISYQEVAQFIPAPEEALDPKVI 542 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I+ Y Y + M + +++K E + IP++ DY ++ L+ E K+KL ++P + Sbjct: 543 EQVEIQIKYEGYIKKAMEKVEKLKRMEAKRIPENIDYQAINGLATEAKQKLQKIQPETIA 602 Query: 594 QASKIEGMTPAALNLLLIYIKKNTV 618 QAS+I G+ PA +++L++YI++ + Sbjct: 603 QASRISGVNPADISILMVYIEQGKI 627 >gi|260584385|ref|ZP_05852132.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Granulicatella elegans ATCC 700633] gi|260157903|gb|EEW92972.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Granulicatella elegans ATCC 700633] Length = 632 Score = 496 bits (1277), Expect = e-138, Method: Compositional matrix adjust. Identities = 264/619 (42%), Positives = 372/619 (60%), Gaps = 5/619 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAG EAA +A++GA T L+T + M CNP++GG KG +VREIDA Sbjct: 9 NYDVIVVGAGHAGSEAALASARMGAKTLLLTMNLEMVAFMPCNPSVGGPAKGVVVREIDA 68 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ LY M++ I QENLD+ QG Sbjct: 69 LGGEMGRNIDKTYIQMRMLNTGKGPAVRALRAQADKHLYAQEMKKTIEQQENLDLKQGIA 128 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + +V ++ R VVLT GT RG I IG+LK +G PS L Sbjct: 129 ERLIVEDGVCKGVVSHTGAIYRSKAVVLTAGTSSRGQIIIGELKYSSGANNSQPSIKLSE 188 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR--QIECGI 242 + ++ F+ R KTGTP R+ +I + KTE Q DE FSF + R QI C + Sbjct: 189 NLLELGFELARFKTGTPPRVKSSSIDYSKTEIQPGDETPNLFSFTSKDEDYRYDQIPCWL 248 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH I EN+ + +++G ++ G RYCPSIEDKIVRF ++ HQIFLEPEG NT Sbjct: 249 TYTNEGTHEKIRENLHRAPMFTGIVEGVGARYCPSIEDKIVRFSDKPRHQIFLEPEGENT 308 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q Q I T+ GLEK ++R GYAIEYD + P +L T ETK + Sbjct: 309 EEVYIQGLSTSLPEDVQIQMIHTVEGLEKAEMMRTGYAIEYDVVIPHQLKNTFETKIVEN 368 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQ+NGT+GYEEAA QGL AGIN+ RK + R+D+YIGV++DDL +KG E Sbjct: 369 LFTAGQMNGTSGYEEAAGQGLYAGINAVRKIRGEESFILGRSDAYIGVLVDDLVTKGTTE 428 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYR+ TSRAEYR+ LR DNAD RLT G +LG I + R F + ++S+ Sbjct: 429 PYRLLTSRAEYRLLLRHDNADLRLTEKGRELGLISDERYAAFQEKQAAIQAEIKRIQSIR 488 Query: 483 LTSKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 L + ++ K+ + + + L P+ S +L + S V E+++I Sbjct: 489 LKPTEQLQSFLAEKESAELKDGILLSDLLKRPELSYDDLIGFAEEEVVVSREVKEQVEIS 548 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + +++K E + IP + DY ++ L+ E +++L +++P + QAS+I Sbjct: 549 VKYEGYIAKAIEKVEKLKRMEAKRIPSNIDYDAINGLATEARQRLKLIQPETIAQASRIS 608 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++L++YI++ + Sbjct: 609 GVNPADVSILMVYIEQGKI 627 >gi|332523577|ref|ZP_08399829.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus porcinus str. Jelinkova 176] gi|332314841|gb|EGJ27826.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus porcinus str. Jelinkova 176] Length = 633 Score = 496 bits (1277), Expect = e-138, Method: Compositional matrix adjust. Identities = 266/622 (42%), Positives = 380/622 (61%), Gaps = 14/622 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAG EA+ AA++G T L T + M CNP+IGG KG +VREIDA Sbjct: 8 SYDVIVIGAGHAGVEASLAAARMGCKTLLATINLDMLAFMPCNPSIGGSAKGIVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ ++LN KGPAVR R QAD+ LY M++ + +QENL + Q + Sbjct: 68 LGGEMGKNIDKTYIQMKMLNTGKGPAVRALRAQADKALYAREMKQTVENQENLTLRQSMI 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ VV+TTGT LRG I +G+LK +G S +L + Sbjct: 128 DDILVEDGKVVGVLTATGQKFSARAVVVTTGTALRGEIILGELKYSSGPNNSLASITLAD 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGI 242 + K + GR KTGTP R+ +I + +TE Q D FSFM+ + QI C + Sbjct: 188 NLKKLGLEIGRFKTGTPPRVKASSIDYSQTEIQPGDHNPNHFSFMSKDEDYLKDQIPCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +H II +N+ + ++SG +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG +T Sbjct: 248 TYTNKNSHDIINKNLYRAPMFSGIVKGIGPRYCPSIEDKIVRFADKERHQLFLEPEGRDT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q + +I GLE ++R GYAIEYD + P +L TLETK ISG Sbjct: 308 EEVYVQGLSTSLPEDVQKDLLHSIKGLENAEMMRTGYAIEYDIVLPHQLRATLETKVISG 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQ NGT+GYEEAA QG++AGIN+A K + R+D+YIGVMIDDL +KG LE Sbjct: 368 LFTAGQTNGTSGYEEAAGQGIIAGINAALKVQGKPELILKRSDAYIGVMIDDLVTKGTLE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR-------QKRFAKYIQEYNFLR 475 PYR+ TSRAEYR+ LR DNAD RLT +G ++G + + R +K+F K ++ + ++ Sbjct: 428 PYRLLTSRAEYRLILRHDNADMRLTELGRQIGLVDDERWSIFETKKKQFEKELRRLSSIK 487 Query: 476 SLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA-RKFSSLVIE 534 LK + T++ + ++ FK TA EF+ P+ S A + VIE Sbjct: 488 --LKPIRETNEKVE--ALGFKPLTDAMTAKEFMRRPEIDYATAISFIGSADENLDTKVIE 543 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 L+ E Y Y + + + ++K E++ IPK+ D+ ++ +++ E ++K + P + Q Sbjct: 544 LLETEIKYEGYINKALDQVAKMKRMEEKKIPKNIDWDAIDSIATEARQKFKKINPETIGQ 603 Query: 595 ASKIEGMTPAALNLLLIYIKKN 616 AS+I G+ PA +++L++YI+ N Sbjct: 604 ASRISGVNPADISILMVYIEGN 625 >gi|227539255|ref|ZP_03969304.1| glucose-inhibited division protein A [Sphingobacterium spiritivorum ATCC 33300] gi|227240937|gb|EEI90952.1| glucose-inhibited division protein A [Sphingobacterium spiritivorum ATCC 33300] Length = 619 Score = 496 bits (1277), Expect = e-138, Method: Compositional matrix adjust. Identities = 276/621 (44%), Positives = 391/621 (62%), Gaps = 16/621 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + Y+VIV+G GHAGCEAAA AA LG+S LIT I MSCNPAIGG+ KG +VREID Sbjct: 3 KKYNVIVVGAGHAGCEAAAAAANLGSSVLLITMNMGVIAQMSCNPAIGGVAKGQIVREID 62 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 A+ G G +AD + +QFR+LN+ KGPA+ PR+Q DR + + ++ + NLD+ Q Sbjct: 63 AMGGYTGIIADKSTLQFRMLNLSKGPAMWSPRSQNDRMRFAEEWRMQLEAIPNLDMWQDT 122 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + + ++ I VVLT GTFL GVIHIG+ K GR G+ + L Sbjct: 123 VKEVIVEGDKAAGVITSLGIRIEADAVVLTNGTFLNGVIHIGEKKFGGGRTGEKAATGLT 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + F++GR+KTGTP R+DG+++ ++ E+Q+ DE FS+ I Q C IT Sbjct: 183 EQLVSLGFESGRMKTGTPPRIDGRSLNYELMEEQWGDENKGRFSYTDVPIPTAQRCCWIT 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN + H ++ + S +++G IK GPRYCPSIEDKI RF ER HQIF+EPEG NT Sbjct: 243 YTNDKVHEMLKTGFERSPMFTGRIKGLGPRYCPSIEDKINRFAERERHQIFVEPEGFNTV 302 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y NG ST+LPE++Q + ++ IPG E + RPGYAIEYD+ P +L TLET ++ L Sbjct: 303 EIYVNGFSTSLPEDVQQKALQLIPGFENARMYRPGYAIEYDFFPPMQLDLTLETLRVKHL 362 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEA AQG +AGIN+ ++ N L + R++SYIGV+IDDL +KG EP Sbjct: 363 FFAGQINGTTGYEEAGAQGFIAGINAHQRINDLHELTLKRSESYIGVLIDDLVTKGTEEP 422 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R+ LR DNAD RLTP+ KLG +GE R + + I+ + + L+ + Sbjct: 423 YRMFTSRAEHRLLLRQDNADIRLTPMAYKLGLVGEERLNKVNEKIKNSDAIVEYLRQNSV 482 Query: 484 TS-------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPD----ARKFSSLV 532 T+ + L+S+ +S KTR + LS P +I ++ D +F + Sbjct: 483 TADHINPVLEELNSSPVS----QKTRM-FNILSRPQINIYDIKKADSDFESYLNQFDTET 537 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 IE+ +I+ Y +Y ++M +K E + I +FDY+SL +LS E ++KL +KP L Sbjct: 538 IEQAEIKVKYDSYFEKEMEIVNRMKKMEDKEINPNFDYNSLTSLSIEARQKLLKVKPRTL 597 Query: 593 LQASKIEGMTPAALNLLLIYI 613 QAS+I G++PA +++L++++ Sbjct: 598 GQASRISGVSPADISVLMVHM 618 >gi|300861596|ref|ZP_07107680.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis TUSoD Ef11] gi|300849057|gb|EFK76810.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis TUSoD Ef11] gi|315143560|gb|EFT87576.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis TX2141] Length = 632 Score = 496 bits (1277), Expect = e-138, Method: Compositional matrix adjust. Identities = 271/625 (43%), Positives = 384/625 (61%), Gaps = 16/625 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+G GHAG EAA AA++G T L+T + M CNP++GG KG +VREIDA Sbjct: 8 SYDVIVVGAGHAGSEAALAAARMGVKTLLLTINLDMVAFMPCNPSVGGPAKGVVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ R+LN KGPAVR R QAD+ Y M+ I +ENL + QG V Sbjct: 68 LGGEMGKNIDKTYIQMRMLNTGKGPAVRALRAQADKHAYATEMKHTIEKEENLTLRQGIV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + +V + R VV+T GT LRG I IG+LK +G PS L N Sbjct: 128 EELIVEDGVCRGVVTSTGAAYRSQAVVITAGTALRGEIIIGELKYSSGPNNSQPSVGLAN 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNRQIE-CGI 242 + + R KTGTP R+ TI + TE+Q D+ FS+ T D N+ E C + Sbjct: 188 HLKELGLEIDRFKTGTPPRVKSSTIDYSVTEEQPGDKEPNHFSYSTLDSAYNQNQEPCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II +N+ + +++G ++ G RYCPSIEDKIVRF ++ HQ+FLEPEGLNT Sbjct: 248 TYTNETTHEIIQKNLHRAPMFTGIVEGVGARYCPSIEDKIVRFADKPRHQLFLEPEGLNT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q + + +I GLEKV ++R GYAIEYD + P +L PTLETK I Sbjct: 308 EEVYVQGLSTSLPEDVQTEMLHSIEGLEKVEMMRTGYAIEYDVVVPHQLRPTLETKVIEN 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQ NGT+GYEEAA QGL+AGIN+A K + + R+D YIGVMIDDL +KG E Sbjct: 368 LYTAGQTNGTSGYEEAAGQGLMAGINAALKIQGKEPLVLKRSDGYIGVMIDDLVTKGTNE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRS----LL 478 PYR+ TSRAEYR+ LR DNAD RLT +G ++G + +++++A Y+ + + + L Sbjct: 428 PYRLLTSRAEYRLILRHDNADLRLTEMGHEIGLV---KEEQYAAYLVKKAAVEAEIARLG 484 Query: 479 KSLVLTSKN----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARK-FSSLVI 533 K + +K L + + +DG A +FL P+ S Q + P + VI Sbjct: 485 KHRIKPTKEVQAFLETKGAAGLKDGI--LARDFLKRPEISYQEVAQFIPAPEEALDPKVI 542 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I+ Y Y + M + +++K E + IP++ DY ++ L+ E K+KL ++P + Sbjct: 543 EQVEIQIKYEGYIKKAMEKVEKLKRMEAKRIPENIDYQAINGLATEAKQKLQKIQPETIA 602 Query: 594 QASKIEGMTPAALNLLLIYIKKNTV 618 QAS+I G+ PA +++L++YI++ + Sbjct: 603 QASRISGVNPADISILMVYIEQGKI 627 >gi|312901324|ref|ZP_07760605.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis TX0470] gi|311291557|gb|EFQ70113.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis TX0470] Length = 632 Score = 496 bits (1277), Expect = e-138, Method: Compositional matrix adjust. Identities = 271/625 (43%), Positives = 385/625 (61%), Gaps = 16/625 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+G GHAG EAA AA++G T L+T + M CNP++GG KG +VREIDA Sbjct: 8 SYDVIVVGAGHAGSEAALAAARMGVKTLLLTINLDMVAFMPCNPSVGGPAKGVVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ R+LN KGPAVR R QAD+ Y M+ I +ENL + QG V Sbjct: 68 LGGEMGKNIDKTYIQMRMLNTGKGPAVRALRAQADKHAYATEMKHTIEKEENLTLRQGIV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + +V + R VV+T GT LRG I IG+LK +G PS L N Sbjct: 128 EELIVEDGVCRGVVTSTGAAYRSQAVVITAGTALRGEIIIGELKYSSGPNNSQPSVGLAN 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNRQIE-CGI 242 + + R KTGTP R+ TI + TE+Q D+ FS+ T D N+ E C + Sbjct: 188 HLKELGLEIDRFKTGTPPRVKSSTIDYSVTEEQPGDKEPNHFSYSTPDSAYNQNQEPCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II +N+ + +++G ++ G RYCPSIEDKIVRF ++ HQ+FLEPEGLNT Sbjct: 248 TYTNETTHEIIQKNLHRAPMFTGIVEGVGARYCPSIEDKIVRFADKPRHQLFLEPEGLNT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q + + +I GLEKV ++R GYAIEYD + P +L PTLETK I Sbjct: 308 EEVYVQGLSTSLPEDVQTEMLHSIEGLEKVEMMRTGYAIEYDVVVPHQLRPTLETKVIEN 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQ NGT+GYEEAA QGL+AGIN+A K + + R+D YIGVMIDDL +KG E Sbjct: 368 LYTAGQTNGTSGYEEAAGQGLMAGINAALKIQGKEPLVLKRSDGYIGVMIDDLVTKGTNE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRS----LL 478 PYR+ TSRAEYR+ LR DNAD RLT +G ++G + +++++A Y+ + + + L Sbjct: 428 PYRLLTSRAEYRLILRHDNADLRLTEMGHEIGLV---KEEQYAAYLVKKAAVEAEIARLG 484 Query: 479 KSLVLTSKN----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARK-FSSLVI 533 K + +K L + + +DG A +FL P+ S Q + P + + VI Sbjct: 485 KHRIKPTKEVQAFLETKGAAGLKDGI--LARDFLKRPEISYQEVAQFIPAPEEALNPKVI 542 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I+ Y Y + M + +++K E + IP++ DY ++ L+ E K+KL ++P + Sbjct: 543 EQVEIQIKYEGYIKKAMEKVEKLKRMEAKRIPENIDYQAINGLATEAKQKLQKIQPETIA 602 Query: 594 QASKIEGMTPAALNLLLIYIKKNTV 618 QAS+I G+ PA +++L++YI++ + Sbjct: 603 QASRISGVNPADISILMVYIEQGKI 627 >gi|293364411|ref|ZP_06611137.1| glucose-inhibited division protein A [Streptococcus oralis ATCC 35037] gi|307702624|ref|ZP_07639576.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus oralis ATCC 35037] gi|291317257|gb|EFE57684.1| glucose-inhibited division protein A [Streptococcus oralis ATCC 35037] gi|307623740|gb|EFO02725.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus oralis ATCC 35037] Length = 637 Score = 496 bits (1277), Expect = e-138, Method: Compositional matrix adjust. Identities = 258/615 (41%), Positives = 371/615 (60%), Gaps = 6/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DAL Sbjct: 9 YDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + D IQ ++LN KGPAVR R QAD+ELY M++ + +Q+NL + Q + Sbjct: 69 GGEMAKTIDKTYIQMKMLNTGKGPAVRALRAQADKELYSKEMRKTVENQDNLTLRQTMID 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + V++TTGT LRG I IG LK +G S +L ++ Sbjct: 129 EILVEDGKVVGVRTATHQEYAAKAVIVTTGTALRGEIIIGDLKYSSGPNHSLASINLADN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 + + GR KTGTP R+ +I +D TE Q DE FS+ + + Q+ C +T Sbjct: 189 LKELGLEIGRFKTGTPPRVKASSINYDVTEIQPGDEAPNHFSYTSRDEDYVKDQVPCWLT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +H II N+ + +++G +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG NT+ Sbjct: 249 YTNGTSHEIIQNNLHRAPMFTGVVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRNTE 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE++Q + +I GLE ++R GYAIEYD + P +L TLETKKISGL Sbjct: 309 EVYVQGLSTSLPEDVQRDLVHSIKGLENAEMMRTGYAIEYDMVLPHQLRATLETKKISGL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMIDDL +KG +EP Sbjct: 369 FTAGQTNGTSGYEEAAGQGIIAGINAALKIQGKPELILKRSDGYIGVMIDDLVTKGTIEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G ++G + + R RF +++ L S+ L Sbjct: 429 YRLLTSRAEYRLILRHDNADMRLTEMGREIGLVDDERWARFEIKKNQFDNEMKRLDSIKL 488 Query: 484 ---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQIE 539 N + FK TA EFL P+ S Q++ + I P A +IE ++ E Sbjct: 489 KPVKETNAKVEEMGFKPLTDAVTAKEFLRRPEVSYQDVVAFIGPAAEDLDDKIIELIETE 548 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + M + ++K E++ IP + D+ + +++ E ++K ++ P + QAS+I Sbjct: 549 IKYEGYISKAMDQVAKMKRMEEKRIPANIDWDDIDSIATEARQKFKLINPETIGQASRIS 608 Query: 600 GMTPAALNLLLIYIK 614 G+ PA +++L++Y++ Sbjct: 609 GVNPADISILMVYLE 623 >gi|291536995|emb|CBL10107.1| glucose-inhibited division protein A [Roseburia intestinalis M50/1] Length = 652 Score = 496 bits (1277), Expect = e-138, Method: Compositional matrix adjust. Identities = 267/642 (41%), Positives = 382/642 (59%), Gaps = 31/642 (4%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 I +YDV+V+G GHAGCEAA A+LG T + T +I M CNP IGG KGHLVRE Sbjct: 4 IEENYDVVVVGAGHAGCEAALACARLGLETIIFTVSVDSIAMMPCNPNIGGSSKGHLVRE 63 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G MG D IQ ++LN KGPAV R QAD+ Y + M++ + + E+L + Q Sbjct: 64 IDALGGQMGINIDKTFIQSKMLNKSKGPAVHSLRAQADKVNYSMEMRKTLQNTEHLTIRQ 123 Query: 122 GEVAGFNTEKNIISSIVMQDNSMI--------------------RCSTVVLTTGTFLRGV 161 EVA T +++ +D M+ C VVL TGT+LR Sbjct: 124 AEVAEIITVPANSAAVEKKDGQMVEINGELQKITGVKTVSGGVYHCKAVVLCTGTYLRAR 183 Query: 162 IHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADE 221 G++ G G +N L +S + R KTGTPAR+D +++ + K ++Q DE Sbjct: 184 CLTGEMITYTGPNGLMAANHLTDSLKAHGIEMFRFKTGTPARVDKRSLDFSKMQEQKGDE 243 Query: 222 RLIPFSFMT--DKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIE 279 R++PFSF T + + Q+ C +T TN +TH II N+ S IY+G I+ GPRYCPSIE Sbjct: 244 RVVPFSFTTNPEDVQIDQVSCWLTYTNPKTHEIIRANLDRSPIYAGIIEGTGPRYCPSIE 303 Query: 280 DKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGY 339 DK+V+F +++ HQIF+EPEG+NT+ +Y G+S++LPE++QH+ RT+PG+E V I+R Y Sbjct: 304 DKVVKFADKDRHQIFIEPEGINTNEMYVGGMSSSLPEDVQHEMYRTLPGMEHVKIVRNAY 363 Query: 340 AIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCI 399 AIEYD INP +L+ +LE KKI GLF GQ NG++GYEEAA QGL+AGIN+A + + Sbjct: 364 AIEYDCINPDQLYASLEFKKIKGLFSGGQFNGSSGYEEAACQGLIAGINAAMGILGKEPL 423 Query: 400 CFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGER 459 R+++YIGV+IDDL +K EPYRM TSRAEYR+ LR DNAD RLT G ++G I + Sbjct: 424 VLDRSEAYIGVLIDDLVTKENHEPYRMMTSRAEYRLLLRQDNADLRLTKKGYEIGLISKE 483 Query: 460 RQKRFAK----YIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAY--EFLSYPDF 513 R K QE + + K + +K + S+ + E + P+ Sbjct: 484 RYDWVCKKEELIAQE---IERVAKVKIGANKKVQELLESYDSIPLNTGTFLTELIRRPEL 540 Query: 514 SIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSL 573 L I P+ + V E++ I Y Y RQM + + K EK+ IP++F+Y + Sbjct: 541 DYDKLAPIDPERPDLPAEVAEQVNISIKYDGYIKRQMKQVESFKKLEKKKIPENFNYDDV 600 Query: 574 PALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 P+L E ++KL P ++ QAS+I G++PA +++LL+Y+++ Sbjct: 601 PSLRIEARQKLKTYSPTSIGQASRISGVSPADVSVLLVYMEQ 642 >gi|168483771|ref|ZP_02708723.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae CDC1873-00] gi|172042816|gb|EDT50862.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae CDC1873-00] gi|332203294|gb|EGJ17361.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus pneumoniae GA47368] Length = 637 Score = 496 bits (1276), Expect = e-138, Method: Compositional matrix adjust. Identities = 258/615 (41%), Positives = 371/615 (60%), Gaps = 6/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DAL Sbjct: 9 YDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + D IQ ++LN KGPAVR R QAD+ELY M++ + +QENL + Q + Sbjct: 69 GGEMAKTIDKTYIQMKMLNTGKGPAVRALRAQADKELYSKEMRKTVENQENLTLRQTMID 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + V++TTGT LRG I IG LK +G S +L ++ Sbjct: 129 KILVEDGKVVGVRTATHQEYAAKAVIVTTGTALRGEIIIGDLKYSSGPNHSLASINLADN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 + + GR KTGTP R+ +I +D TE Q D FS+ + + Q+ C +T Sbjct: 189 LKELGLEIGRFKTGTPPRVKASSINYDVTEIQPGDAVPNHFSYTSRDEDYVKDQVPCWLT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +H II N+ + +++G +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG NT+ Sbjct: 249 YTNGTSHEIIQNNLHRAPMFTGVVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRNTE 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE++Q + +I GLE ++R GYAIEYD + P +L TLETKKISGL Sbjct: 309 EVYVQGLSTSLPEDVQRDLVHSIKGLENAEMMRTGYAIEYDMVLPHQLRATLETKKISGL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMIDDL +KG +EP Sbjct: 369 FTAGQTNGTSGYEEAAGQGIIAGINAALKIQGKPELILKRSDGYIGVMIDDLVTKGTIEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G ++G + + R RF +++ L S+ L Sbjct: 429 YRLLTSRAEYRLILRHDNADMRLTEMGREIGLVDDERWARFEIKKNQFDNEMKRLDSIKL 488 Query: 484 ---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQIE 539 N + FK TA EFL P+ S Q++ + I P A + +IE ++ E Sbjct: 489 KPVKETNAKVEEMGFKPLTDAVTAKEFLRRPEVSYQDVVAFIGPAAEELDDKIIELIETE 548 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + M + ++K E++ IP + D+ + +++ E ++K ++ P + QAS+I Sbjct: 549 IKYEGYISKAMDQVAKMKRMEEKRIPANIDWDDIDSIATEARQKFKLINPETIGQASRIS 608 Query: 600 GMTPAALNLLLIYIK 614 G+ PA +++L++Y++ Sbjct: 609 GVNPADISILMVYLE 623 >gi|269798907|ref|YP_003312807.1| glucose inhibited division protein A [Veillonella parvula DSM 2008] gi|269095536|gb|ACZ25527.1| glucose inhibited division protein A [Veillonella parvula DSM 2008] Length = 623 Score = 496 bits (1276), Expect = e-138, Method: Compositional matrix adjust. Identities = 264/620 (42%), Positives = 384/620 (61%), Gaps = 16/620 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIGGGHAGCEAA A++G T + T I M CNPA+GG GK HLV E+DA Sbjct: 6 NYDVIVIGGGHAGCEAALATARMGHRTLMATISLDNIALMPCNPAVGGPGKSHLVYEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG ADA IQ R+LN+ KGPAV R Q+D+ Y+ M++ + + +NL+V Q V Sbjct: 66 LGGQMGINADATAIQMRMLNMGKGPAVHSLRCQSDKIKYQHLMKQTLENTDNLNVKQIMV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + IV + ++L TGT+L+G I IG + G G + Sbjct: 126 TELKVEDDKVIGIVTELGEFYGAKAIILCTGTYLKGKILIGDIDYVGGPNGQRVAEHFSQ 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S + + R KTGTPAR+D +T+ + Q D FSFM + I + C +T Sbjct: 186 SLLDNGIELMRFKTGTPARVDKRTLNLENMVVQEGDAHHHAFSFMDEWINRNEDVCWLTY 245 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN ETH II NI + +YSG I+ GPRYCPSIEDK+VRF ++ HQ+F+EPEG T+ Sbjct: 246 TNKETHEIIHSNIHRAPMYSGKIEGVGPRYCPSIEDKVVRFADKERHQLFVEPEGTGTNE 305 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+ST+LP ++Q+ F+RTIPGLE V I+RP YAIEYD +NP +L P L+ K I GL+ Sbjct: 306 MYVQGMSTSLPMDVQYAFLRTIPGLENVEIMRPAYAIEYDCLNPTQLTPALQVKHIEGLY 365 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ NGT+GYEEAAAQGL+AGIN+A + +R+++YIGV+IDDL +KG EPY Sbjct: 366 SAGQANGTSGYEEAAAQGLMAGINAALWIQGKEPFILARSEAYIGVLIDDLVTKGTNEPY 425 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSR+EYR+ LR DNAD RLT G ++G + + R+AK+ + + + L T Sbjct: 426 RMMTSRSEYRLLLRQDNADLRLTEKGREIGLV---KDDRWAKFTAKKAAIEEAMDMLRNT 482 Query: 485 SKNLS-STSISFKQDGKT--RT---AYEFLSYPDFSIQNLFSICPDA---RKFSSLVIER 535 N S T + + G RT AY+ + + S ++I DA ++++ V E Sbjct: 483 PVNPSKETQVLLEGLGTAPIRTGIHAYDLVKRNELS----YAIVADAFGLKRYTPDVEEA 538 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 + I +Y Y +QM + +++ E++++PK++DY+ + +S E ++KL+ ++P ++ QA Sbjct: 539 VDISITYEGYIKKQMDQVDKVRKLEEKILPKEWDYTEIKGISLEAQQKLNKIRPHSIGQA 598 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G++PA +++LLI +++ Sbjct: 599 SRISGVSPADVSVLLIQLEQ 618 >gi|69247495|ref|ZP_00604365.1| Glucose-inhibited division protein A subfamily [Enterococcus faecium DO] gi|257890522|ref|ZP_05670175.1| glucose-inhibited division protein A [Enterococcus faecium 1,231,410] gi|257893098|ref|ZP_05672751.1| glucose-inhibited division protein A [Enterococcus faecium 1,231,408] gi|258615277|ref|ZP_05713047.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecium DO] gi|260558220|ref|ZP_05830416.1| glucose-inhibited division protein A subfamily [Enterococcus faecium C68] gi|293563244|ref|ZP_06677696.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecium E1162] gi|314948149|ref|ZP_07851545.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecium TX0082] gi|68194820|gb|EAN09295.1| Glucose-inhibited division protein A subfamily [Enterococcus faecium DO] gi|257826882|gb|EEV53508.1| glucose-inhibited division protein A [Enterococcus faecium 1,231,410] gi|257829477|gb|EEV56084.1| glucose-inhibited division protein A [Enterococcus faecium 1,231,408] gi|260075394|gb|EEW63700.1| glucose-inhibited division protein A subfamily [Enterococcus faecium C68] gi|291604783|gb|EFF34265.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecium E1162] gi|313645403|gb|EFS09983.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecium TX0082] Length = 633 Score = 496 bits (1276), Expect = e-138, Method: Compositional matrix adjust. Identities = 267/621 (42%), Positives = 380/621 (61%), Gaps = 9/621 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAG EAA AA++G+ T L+T + M CNP++GG KG +VREIDA Sbjct: 8 AYDVIVVGAGHAGSEAALAAARMGSKTLLLTINLDMVAFMPCNPSVGGPAKGVVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ R+LN KGPAVR R QAD+ Y M+ I + NL + QG V Sbjct: 68 LGGEMGKNIDKTYIQMRMLNTGKGPAVRALRAQADKHAYSTEMKHTIEKEPNLTLRQGIV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + +V + R VV+T GT LRG I IG+LK +G PS L N Sbjct: 128 EELIVEDGVCHGVVTSTGASYRAKAVVITAGTALRGEIIIGELKYSSGPNNSQPSIGLAN 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR--QIECGI 242 + F R KTGTP R+ TI + TE+Q D+ FSF T + Q C + Sbjct: 188 HLKELGFAIERFKTGTPPRVKSSTIDYSVTEEQPGDKEPNHFSFSTPDSAYKLDQESCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T T TH+II +N+ + +++G ++ G RYCPSIEDKIVRF ++ HQ+FLEPEGLNT Sbjct: 248 TYTGETTHQIIRDNLHRAPMFTGIVEGVGARYCPSIEDKIVRFADKPRHQLFLEPEGLNT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q + +I GLEKV ++R GYAIEYD + P +L PTLETK + Sbjct: 308 EEVYVQGLSTSLPEDVQVNMLHSIAGLEKVEMMRTGYAIEYDVVEPHQLRPTLETKVVEN 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQ NGT+GYEEAA QGL+AGIN+A K + + R+D YIGVMIDDL +KG E Sbjct: 368 LYTAGQTNGTSGYEEAAGQGLIAGINAALKVQGKEPLVIKRSDGYIGVMIDDLVTKGTNE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAK----YIQEYNFLRSL- 477 PYR+ TSRAEYR+ LR DNAD RLT +G ++G + E + K + K QE L ++ Sbjct: 428 PYRLLTSRAEYRLLLRHDNADLRLTEMGHRVGLVKEDQYKNYLKKKEAVEQEIKRLMNVR 487 Query: 478 LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 +K L++ + + +DG A +FL P+ + L P+ + + IE+++ Sbjct: 488 IKPTEEVQDFLATINAAPLKDGV--LASDFLRRPEITYAELLRFIPENEELTRKEIEQVE 545 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 ++ Y Y + M + +++K E + IP++ DY+++ L+ E K+KL ++P + QAS+ Sbjct: 546 VQIKYEGYIKKAMEKVEKLKRMEAKKIPENIDYAAINGLATEAKQKLQKIQPETIAQASR 605 Query: 598 IEGMTPAALNLLLIYIKKNTV 618 I G+ PA L++L++YI++ + Sbjct: 606 ISGVNPADLSILMVYIEQGKI 626 >gi|317133703|ref|YP_004093017.1| glucose inhibited division protein A [Ethanoligenens harbinense YUAN-3] gi|315471682|gb|ADU28286.1| glucose inhibited division protein A [Ethanoligenens harbinense YUAN-3] Length = 630 Score = 496 bits (1276), Expect = e-138, Method: Compositional matrix adjust. Identities = 265/616 (43%), Positives = 364/616 (59%), Gaps = 7/616 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +Y VIG GHAG EAA A+LG T L T + +M CNP+IGG KGHLVREIDA Sbjct: 7 AYGAAVIGAGHAGIEAALACARLGVPTVLFTLNLDAVANMPCNPSIGGTAKGHLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR ADA +Q R+LN KGPAV R Q DR Y M+ + + LD+ Q EV Sbjct: 67 LGGEMGRAADATFLQSRMLNRGKGPAVHSLRMQCDRRAYHARMKHVLETTPLLDLKQAEV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 K +S++V + ++ VV+ TGT+LRG +HIG++ +G G + L + Sbjct: 127 VEIRVRKGAVSAVVTRLGAVFTVRAVVIATGTYLRGRVHIGEVSYESGPDGMFGPSLLSD 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + K R KTGTPAR+ +I + E Q D +IPFSF T+ C I Sbjct: 187 NLQKLGLPLLRFKTGTPARVKRASIDFSTLEVQTGDNPVIPFSFETENPGENTAVCHIAY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN ETH II EN+ S +Y+G I+ GPRYCPSIEDK+VRF ++ HQIF+EP G +T+ Sbjct: 247 TNAETHHIIRENLHRSPLYAGRIEGVGPRYCPSIEDKVVRFADKERHQIFIEPLGKDTEE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y GIS++LPEE+Q QF+RTI G + + ++R YAIEYD I+P L P LETK + GL+ Sbjct: 307 LYLGGISSSLPEEVQMQFLRTIKGFDHIRMMRTAYAIEYDCIDPLALTPMLETKAVQGLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ NGT+GYEEAAAQGL+AGIN+A + + SR +YIG +IDDL +KG EPY Sbjct: 367 GAGQFNGTSGYEEAAAQGLMAGINAALQIKGEVPLVLSRAQAYIGTLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSRAEYR+ LR DNAD RLTPIG ++G I + R RF + ++ R + ++L Sbjct: 427 RMMTSRAEYRLVLRQDNADMRLTPIGYRIGLISDERFVRFKEKQRQIQTERQRTEKIILP 486 Query: 485 SKNLSSTSISFKQDGKTRTA-----YEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + +Q G T + L P L V E+++I Sbjct: 487 PS--AKLNAYLEQVGTTPLTTGAKLADLLRRPQVHYDALAPFDLGRPVLPEAVREQVEIS 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y R+ +++ E+R++P D DY ++ L E KL ++P N+ QAS+I Sbjct: 545 VKYEGYIKRENAAIEQMHRLEQRVLPPDIDYRAVSGLRLEAMSKLEAVRPINIAQASRIS 604 Query: 600 GMTPAALNLLLIYIKK 615 G++PA +++LLIY+++ Sbjct: 605 GVSPADISVLLIYLEQ 620 >gi|255974477|ref|ZP_05425063.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis T2] gi|307284015|ref|ZP_07564185.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis TX0860] gi|255967349|gb|EET97971.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis T2] gi|306503386|gb|EFM72635.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis TX0860] Length = 632 Score = 496 bits (1276), Expect = e-138, Method: Compositional matrix adjust. Identities = 271/625 (43%), Positives = 384/625 (61%), Gaps = 16/625 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+G GHAG EAA AA++G T L+T + M CNP++GG KG +VREIDA Sbjct: 8 SYDVIVVGAGHAGSEAALAAARMGVKTLLLTINLDMVAFMPCNPSVGGPAKGVVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ R+LN KGPAVR R QAD+ Y M+ I +ENL + QG V Sbjct: 68 LGGEMGKNIDKTYIQMRMLNTGKGPAVRALRAQADKHAYATEMKHTIEKEENLTLRQGIV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + +V + R VV+T GT LRG I IG+LK +G PS L N Sbjct: 128 EELIVEDGVCCGVVTSTGAAYRSQAVVITAGTALRGEIIIGELKYSSGPNNSQPSVGLAN 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNRQIE-CGI 242 + + R KTGTP R+ TI + TE+Q D+ FS+ T D N+ E C + Sbjct: 188 HLKELGLEIDRFKTGTPPRVKSSTIDYSVTEEQPGDKEPNHFSYSTPDSAYNQNQEPCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II +N+ + +++G ++ G RYCPSIEDKIVRF ++ HQ+FLEPEGLNT Sbjct: 248 TYTNETTHEIIQKNLHRAPMFTGIVEGVGARYCPSIEDKIVRFADKPRHQLFLEPEGLNT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q + + +I GLEKV ++R GYAIEYD + P +L PTLETK I Sbjct: 308 EEVYVQGLSTSLPEDVQTEMLHSIEGLEKVEMMRTGYAIEYDVVVPHQLRPTLETKVIEN 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQ NGT+GYEEAA QGL+AGIN+A K + + R+D YIGVMIDDL +KG E Sbjct: 368 LYTAGQTNGTSGYEEAAGQGLMAGINAALKIQGKEPLVLKRSDGYIGVMIDDLVTKGTNE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRS----LL 478 PYR+ TSRAEYR+ LR DNAD RLT +G ++G + +++++A Y+ + + + L Sbjct: 428 PYRLLTSRAEYRLILRHDNADLRLTEMGHEIGLV---KEEQYAAYLVKKAAVEAEIARLG 484 Query: 479 KSLVLTSKN----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARK-FSSLVI 533 K + +K L + + +DG A +FL P+ S Q + P + VI Sbjct: 485 KHRIKPTKEVQAFLETKGAAGLKDGI--LARDFLKRPEISYQEVAQFIPAPEEALDPKVI 542 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I+ Y Y + M + +++K E + IP++ DY ++ L+ E K+KL ++P + Sbjct: 543 EQVEIQIKYEGYIKKAMEKVEKLKRMEAKRIPENIDYQAINGLATEAKQKLQKIQPETIA 602 Query: 594 QASKIEGMTPAALNLLLIYIKKNTV 618 QAS+I G+ PA +++L++YI++ + Sbjct: 603 QASRISGVNPADISILMVYIEQGKI 627 >gi|161833655|ref|YP_001597851.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Candidatus Sulcia muelleri GWSS] gi|293977767|ref|YP_003543197.1| glucose-inhibited division protein A [Candidatus Sulcia muelleri DMIN] gi|205831574|sp|A8Z5Q4|MNMG_SULMW RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|152206144|gb|ABS30454.1| glucose inhibited division protein A [Candidatus Sulcia muelleri GWSS] gi|292667698|gb|ADE35333.1| glucose-inhibited division protein A [Candidatus Sulcia muelleri DMIN] Length = 611 Score = 496 bits (1276), Expect = e-138, Method: Compositional matrix adjust. Identities = 267/620 (43%), Positives = 382/620 (61%), Gaps = 15/620 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M + YDVIV+GGGH+G EAA A+ LG++T LIT IG MSCNPA+GG+ KG +++ Sbjct: 1 MFVKQYDVIVVGGGHSGSEAALAASNLGSNTLLITTNLYNIGQMSCNPAMGGIAKGQMIK 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G G + D + IQFR+LN KGPA+ PR Q DR + + + ++NL Sbjct: 61 EIDALGGYSGIITDKSMIQFRMLNKSKGPAMWSPRAQCDRLKFSKEWRLTLEKKKNLSFF 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V + + + I+ +V+LT GTFL G+IHIG K GR+ ++ Sbjct: 121 QSTVVDLIIKNYKVIGVKTILGIYIKSKSVILTNGTFLNGIIHIGDKKNSGGRISENSVK 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 L K F +GR+KTGT RLDG+++ + K +Q D + PFS++++ +Q +C Sbjct: 181 GLTEKLKKIGFFSGRMKTGTSPRLDGRSLDFSKMIEQLGDFPIEPFSYLSNLNILKQKKC 240 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TNLETH ++ + S I++G IK GPRYCPSIE+K+ RF + HQIF+EPEG+ Sbjct: 241 YITHTNLETHNLLSKEFNRSPIFNGKIKCVGPRYCPSIEEKVYRFSNKENHQIFVEPEGV 300 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 NT VY NG ST++PEE+Q++ + TIPG E ++RPGYAIEYDY P +L LETK I Sbjct: 301 NTIEVYINGFSTSMPEEVQYKALLTIPGFEHAKMVRPGYAIEYDYFPPTQLKNNLETKLI 360 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 LF AGQINGTTGYEEAAAQGL+AGIN+ K N+ D R ++YIGV+IDDL KG Sbjct: 361 ENLFFAGQINGTTGYEEAAAQGLIAGINANLKINEKDPFILKRNEAYIGVLIDDLIYKGT 420 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYRI LR DNAD RLT +G+ LG + R I++ K Sbjct: 421 EEPYRMFTSRAEYRILLRQDNADERLTHMGINLGLVSYDR-------IKKLKNKNKNKKQ 473 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNL--FSICPDARKFSSL---VIER 535 L K + ++ K++ K + LS P+ SI ++ S+ + K +++ ++E+ Sbjct: 474 CFLFFKINKANNLILKENIKI---CDLLSRPEISIYDIIKLSLIKNFIKKNNIDKKILEQ 530 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 + + Y Y ++ K++ E IP DFDY+ + ++S E +EKL KP ++ +A Sbjct: 531 ISLYIKYKGYLLKEEENVKKMYRLETIRIPNDFDYNQVKSISIEAREKLLNYKPNSIGEA 590 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G++P+ + +L++++ K Sbjct: 591 SRISGVSPSDIRILILFLIK 610 >gi|256957037|ref|ZP_05561208.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis DS5] gi|257078714|ref|ZP_05573075.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis JH1] gi|294781226|ref|ZP_06746573.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis PC1.1] gi|307268890|ref|ZP_07550255.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis TX4248] gi|256947533|gb|EEU64165.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis DS5] gi|256986744|gb|EEU74046.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis JH1] gi|294451689|gb|EFG20144.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis PC1.1] gi|306514806|gb|EFM83356.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis TX4248] gi|315033581|gb|EFT45513.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis TX0017] gi|315036246|gb|EFT48178.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis TX0027] gi|329577013|gb|EGG58488.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis TX1467] Length = 632 Score = 496 bits (1276), Expect = e-138, Method: Compositional matrix adjust. Identities = 271/625 (43%), Positives = 384/625 (61%), Gaps = 16/625 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+G GHAG EAA AA++G T L+T + M CNP++GG KG +VREIDA Sbjct: 8 SYDVIVVGAGHAGSEAAIAAARMGVKTLLLTINLDMVAFMPCNPSVGGPAKGVVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ R+LN KGPAVR R QAD+ Y M+ I +ENL + QG V Sbjct: 68 LGGEMGKNIDKTYIQMRMLNTGKGPAVRALRAQADKHAYATEMKHTIEKEENLTLRQGIV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + +V + R VV+T GT LRG I IG+LK +G PS L N Sbjct: 128 EELIVEDGVCRGVVTSTGAAYRSQAVVITAGTALRGEIIIGELKYSSGPNNSQPSVGLAN 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNRQIE-CGI 242 + + R KTGTP R+ TI + TE+Q D+ FS+ T D N+ E C + Sbjct: 188 HLKELGLEIDRFKTGTPPRVKSSTIDYSVTEEQPGDKEPNHFSYSTPDSAYNQNQEPCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II +N+ + +++G ++ G RYCPSIEDKIVRF ++ HQ+FLEPEGLNT Sbjct: 248 TYTNETTHEIIQKNLHRAPMFTGIVEGVGARYCPSIEDKIVRFADKPRHQLFLEPEGLNT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q + + +I GLEKV ++R GYAIEYD + P +L PTLETK I Sbjct: 308 EEVYVQGLSTSLPEDVQTEMLHSIEGLEKVEMMRTGYAIEYDVVVPHQLRPTLETKVIEN 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQ NGT+GYEEAA QGL+AGIN+A K + + R+D YIGVMIDDL +KG E Sbjct: 368 LYTAGQTNGTSGYEEAAGQGLMAGINAALKIQGKEPLVLKRSDGYIGVMIDDLVTKGTNE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRS----LL 478 PYR+ TSRAEYR+ LR DNAD RLT +G ++G + +++++A Y+ + + + L Sbjct: 428 PYRLLTSRAEYRLILRHDNADLRLTEMGHEIGLV---KEEQYAAYLVKKAAVEAEIARLG 484 Query: 479 KSLVLTSKN----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARK-FSSLVI 533 K + +K L + + +DG A +FL P+ S Q + P + VI Sbjct: 485 KHRIKPTKEVQAFLETKGAAGLKDGI--LARDFLKRPEISYQEVAQFIPAPEEALDPKVI 542 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I+ Y Y + M + +++K E + IP++ DY ++ L+ E K+KL ++P + Sbjct: 543 EQVEIQIKYEGYIKKAMEKVEKLKRMEAKRIPENIDYQAINGLATEAKQKLQKIQPETIA 602 Query: 594 QASKIEGMTPAALNLLLIYIKKNTV 618 QAS+I G+ PA +++L++YI++ + Sbjct: 603 QASRISGVNPADISILMVYIEQGKI 627 >gi|29377752|ref|NP_816906.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis V583] gi|227518133|ref|ZP_03948182.1| glucose-inhibited division protein A [Enterococcus faecalis TX0104] gi|227555661|ref|ZP_03985708.1| glucose-inhibited division protein A [Enterococcus faecalis HH22] gi|229547153|ref|ZP_04435878.1| glucose-inhibited division protein A [Enterococcus faecalis TX1322] gi|229550723|ref|ZP_04439448.1| glucose-inhibited division protein A [Enterococcus faecalis ATCC 29200] gi|255971527|ref|ZP_05422113.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis T1] gi|256618549|ref|ZP_05475395.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis ATCC 4200] gi|256960900|ref|ZP_05565071.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis Merz96] gi|257081325|ref|ZP_05575686.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis E1Sol] gi|257083983|ref|ZP_05578344.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis Fly1] gi|257087813|ref|ZP_05582174.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Enterococcus faecalis D6] gi|257088458|ref|ZP_05582819.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Enterococcus faecalis CH188] gi|257417402|ref|ZP_05594396.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis AR01/DG] gi|257418863|ref|ZP_05595857.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Enterococcus faecalis T11] gi|257421322|ref|ZP_05598312.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Enterococcus faecalis X98] gi|293384793|ref|ZP_06630640.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis R712] gi|293388149|ref|ZP_06632673.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis S613] gi|307277335|ref|ZP_07558433.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis TX2134] gi|307286636|ref|ZP_07566726.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis TX0109] gi|312902970|ref|ZP_07762159.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis TX0635] gi|312908838|ref|ZP_07767777.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis DAPTO 512] gi|312979520|ref|ZP_07791202.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis DAPTO 516] gi|81170540|sp|Q82YX0|MNMG_ENTFA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|29345220|gb|AAO82976.1| glucose-inhibited division protein A [Enterococcus faecalis V583] gi|227074401|gb|EEI12364.1| glucose-inhibited division protein A [Enterococcus faecalis TX0104] gi|227175214|gb|EEI56186.1| glucose-inhibited division protein A [Enterococcus faecalis HH22] gi|229304156|gb|EEN70152.1| glucose-inhibited division protein A [Enterococcus faecalis ATCC 29200] gi|229307735|gb|EEN73722.1| glucose-inhibited division protein A [Enterococcus faecalis TX1322] gi|255962545|gb|EET95021.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis T1] gi|256598076|gb|EEU17252.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis ATCC 4200] gi|256951396|gb|EEU68028.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis Merz96] gi|256989355|gb|EEU76657.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis E1Sol] gi|256992013|gb|EEU79315.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis Fly1] gi|256995843|gb|EEU83145.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Enterococcus faecalis D6] gi|256997270|gb|EEU83790.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Enterococcus faecalis CH188] gi|257159230|gb|EEU89190.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis ARO1/DG] gi|257160691|gb|EEU90651.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Enterococcus faecalis T11] gi|257163146|gb|EEU93106.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Enterococcus faecalis X98] gi|291077924|gb|EFE15288.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis R712] gi|291082457|gb|EFE19420.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis S613] gi|295112326|emb|CBL30963.1| glucose-inhibited division protein A [Enterococcus sp. 7L76] gi|306502265|gb|EFM71547.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis TX0109] gi|306505969|gb|EFM75141.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis TX2134] gi|310625276|gb|EFQ08559.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis DAPTO 512] gi|310633638|gb|EFQ16921.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis TX0635] gi|311287702|gb|EFQ66258.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis DAPTO 516] gi|315026594|gb|EFT38526.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis TX2137] gi|315148302|gb|EFT92318.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis TX4244] gi|315152697|gb|EFT96713.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis TX0031] gi|315155023|gb|EFT99039.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis TX0043] gi|315158702|gb|EFU02719.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis TX0312] gi|315165649|gb|EFU09666.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis TX1302] gi|315174207|gb|EFU18224.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis TX1346] gi|315576169|gb|EFU88360.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis TX0309B] gi|315579748|gb|EFU91939.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis TX0630] gi|315582979|gb|EFU95170.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis TX0309A] gi|323479217|gb|ADX78656.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis 62] gi|327536409|gb|AEA95243.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis OG1RF] Length = 632 Score = 496 bits (1276), Expect = e-138, Method: Compositional matrix adjust. Identities = 271/625 (43%), Positives = 384/625 (61%), Gaps = 16/625 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+G GHAG EAA AA++G T L+T + M CNP++GG KG +VREIDA Sbjct: 8 SYDVIVVGAGHAGSEAALAAARMGVKTLLLTINLDMVAFMPCNPSVGGPAKGVVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ R+LN KGPAVR R QAD+ Y M+ I +ENL + QG V Sbjct: 68 LGGEMGKNIDKTYIQMRMLNTGKGPAVRALRAQADKHAYATEMKHTIEKEENLTLRQGIV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + +V + R VV+T GT LRG I IG+LK +G PS L N Sbjct: 128 EELIVEDGVCRGVVTSTGAAYRSQAVVITAGTALRGEIIIGELKYSSGPNNSQPSVGLAN 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNRQIE-CGI 242 + + R KTGTP R+ TI + TE+Q D+ FS+ T D N+ E C + Sbjct: 188 HLKELGLEIDRFKTGTPPRVKSSTIDYSVTEEQPGDKEPNHFSYSTPDSAYNQNQEPCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II +N+ + +++G ++ G RYCPSIEDKIVRF ++ HQ+FLEPEGLNT Sbjct: 248 TYTNETTHEIIQKNLHRAPMFTGIVEGVGARYCPSIEDKIVRFADKPRHQLFLEPEGLNT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q + + +I GLEKV ++R GYAIEYD + P +L PTLETK I Sbjct: 308 EEVYVQGLSTSLPEDVQTEMLHSIEGLEKVEMMRTGYAIEYDVVVPHQLRPTLETKVIEN 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQ NGT+GYEEAA QGL+AGIN+A K + + R+D YIGVMIDDL +KG E Sbjct: 368 LYTAGQTNGTSGYEEAAGQGLMAGINAALKIQGKEPLVLKRSDGYIGVMIDDLVTKGTNE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRS----LL 478 PYR+ TSRAEYR+ LR DNAD RLT +G ++G + +++++A Y+ + + + L Sbjct: 428 PYRLLTSRAEYRLILRHDNADLRLTEMGHEIGLV---KEEQYAAYLVKKAAVEAEIARLG 484 Query: 479 KSLVLTSKN----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARK-FSSLVI 533 K + +K L + + +DG A +FL P+ S Q + P + VI Sbjct: 485 KHRIKPTKEVQAFLETKGAAGLKDGI--LARDFLKRPEISYQEVAQFIPAPEEALDPKVI 542 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I+ Y Y + M + +++K E + IP++ DY ++ L+ E K+KL ++P + Sbjct: 543 EQVEIQIKYEGYIKKAMEKVEKLKRMEAKRIPENIDYQAINGLATEAKQKLQKIQPETIA 602 Query: 594 QASKIEGMTPAALNLLLIYIKKNTV 618 QAS+I G+ PA +++L++YI++ + Sbjct: 603 QASRISGVNPADISILMVYIEQGKI 627 >gi|315163424|gb|EFU07441.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis TX0645] Length = 632 Score = 496 bits (1276), Expect = e-138, Method: Compositional matrix adjust. Identities = 271/625 (43%), Positives = 384/625 (61%), Gaps = 16/625 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+G GHAG EAA AA++G T L+T + M CNP++GG KG +VREIDA Sbjct: 8 SYDVIVVGAGHAGSEAALAAARMGVKTLLLTINLDMVAFMPCNPSVGGPAKGVVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ R+LN KGPAVR R QAD+ Y M+ I +ENL + QG V Sbjct: 68 LGGEMGKNIDKTYIQMRMLNTGKGPAVRALRAQADKHAYATEMKHTIEKEENLTLRQGIV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + +V + R VV+T GT LRG I IG+LK +G PS L N Sbjct: 128 EELIVEDGVCRGVVTSTGAAYRSQAVVITAGTALRGEIIIGELKYSSGPNNSQPSVGLAN 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNRQIE-CGI 242 + + R KTGTP R+ TI + TE+Q D+ FS+ T D N+ E C + Sbjct: 188 HLKELGLEIDRFKTGTPPRVKSSTIDYSVTEEQPGDKEPNHFSYSTPDSAYNQNQEPCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II +N+ + +++G ++ G RYCPSIEDKIVRF ++ HQ+FLEPEGLNT Sbjct: 248 TYTNETTHEIIQKNLHRAPMFTGIVEGVGARYCPSIEDKIVRFADKPRHQLFLEPEGLNT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q + + +I GLEKV ++R GYAIEYD + P +L PTLETK I Sbjct: 308 EEVYVQGLSTSLPEDVQTEMLHSIEGLEKVEMMRTGYAIEYDVVVPHQLRPTLETKVIEN 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQ NGT+GYEEAA QGL+AGIN+A K + + R+D YIGVMIDDL +KG E Sbjct: 368 LYTAGQTNGTSGYEEAAGQGLMAGINAALKIQGKEPLVLKRSDGYIGVMIDDLVTKGTNE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRS----LL 478 PYR+ TSRAEYR+ LR DNAD RLT +G ++G + +++++A Y+ + + + L Sbjct: 428 PYRLLTSRAEYRLILRHDNADLRLTEMGHEIGLV---KEEQYAAYLVKKAAVEAEIARLG 484 Query: 479 KSLVLTSKN----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARK-FSSLVI 533 K + +K L + + +DG A +FL P+ S Q + P + VI Sbjct: 485 KHRIKPTKEVQAFLETKGAAGLKDGI--LARDFLKRPEISYQEVAQFIPAPEEALDPKVI 542 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I+ Y Y + M + +++K E + IP++ DY ++ L+ E K+KL ++P + Sbjct: 543 EQVEIQIKYEGYIKKAMEKVEKLKRMEAKRIPENIDYQAINGLATEAKQKLQKIQPETIA 602 Query: 594 QASKIEGMTPAALNLLLIYIKKNTV 618 QAS+I G+ PA +++L++YI++ + Sbjct: 603 QASRISGVNPADISILMVYIEQGKI 627 >gi|229825397|ref|ZP_04451466.1| hypothetical protein GCWU000182_00753 [Abiotrophia defectiva ATCC 49176] gi|229790401|gb|EEP26515.1| hypothetical protein GCWU000182_00753 [Abiotrophia defectiva ATCC 49176] Length = 629 Score = 496 bits (1276), Expect = e-138, Method: Compositional matrix adjust. Identities = 271/622 (43%), Positives = 383/622 (61%), Gaps = 9/622 (1%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 MI ++VIV+G GHAGCEAA AA+LG + T +I M CNP IGG KGHLV+ Sbjct: 1 MICEDFEVIVVGAGHAGCEAALAAARLGKRVLIFTVSVDSIALMPCNPNIGGTSKGHLVK 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G MGR D IQ ++LN KGPAV R QAD+ Y L M++ + + +NL + Sbjct: 61 EIDALGGEMGRNIDKTYIQSKMLNKSKGPAVHSLRAQADKHTYSLEMRKVLENTDNLTIK 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q EVA E ++ + ++ V+L TGT+L+ G + G G S S Sbjct: 121 QAEVAEILVEGGKVAGVKTYSGAVYTAKAVILCTGTYLKARCIYGDVSEYTGPNGLSASI 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK--ITNRQI 238 L +S + D R KTGTPAR+D +TI + K E Q DE+++PFSF+ + I QI Sbjct: 181 HLTDSLLNIGIDLRRFKTGTPARVDKRTIDFSKMEVQNGDEKVVPFSFLNEDKDIGREQI 240 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C +T TN ETHRII ENI S +Y G I+ GPRYCPSIEDK++RF +++ HQIF+EPE Sbjct: 241 PCYLTYTNEETHRIIRENIDRSPLYGGIIEGVGPRYCPSIEDKVMRFADKDRHQIFVEPE 300 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 G T+ +Y +G+S+++PE++Q RTIPGLE V+I+R YAIEYD I+ L +LE K Sbjct: 301 GEYTNEMYVDGMSSSMPEDVQVAMYRTIPGLENVHIVRNAYAIEYDCIDATTLKESLEFK 360 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 SGLF AGQ NG++GYEEAAAQGL+AGIN+ R +K + + R+D+YIGV+IDDL +K Sbjct: 361 VASGLFAAGQFNGSSGYEEAAAQGLIAGINAVRLIDKKEPLILKRSDAYIGVLIDDLVTK 420 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 EPYRM TSRAEYR+ LR DNAD RLT IG ++G I + R + K + L Sbjct: 421 HTKEPYRMMTSRAEYRLLLRQDNADLRLTKIGYEIGLISKERYEALLKKETDIETEIKRL 480 Query: 479 KSLVLTSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVI 533 KS + K + ++ ++G T + + P+ + + L +I + K S+ V Sbjct: 481 KSKTIGGKKEVNDFLT--ENGSAALLGAVTLADLVKRPELNYELLAAIDNERPKLSTAVG 538 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E++ I Y Y R+ + ++ K E RLIP+ DY + + E ++KLS ++P ++ Sbjct: 539 EQVNINIKYEGYIEREYRQVEQFKKMENRLIPEGIDYEKIDNIRKEARQKLSEIQPLSVG 598 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I G++P+ + +LL+YI++ Sbjct: 599 QASRISGVSPSDIAVLLVYIEQ 620 >gi|325473283|gb|EGC76478.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Treponema denticola F0402] Length = 628 Score = 496 bits (1276), Expect = e-138, Method: Compositional matrix adjust. Identities = 265/624 (42%), Positives = 382/624 (61%), Gaps = 18/624 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAG EAA +A++G + LIT + G +SCNP+IGG+ KG++VREIDAL Sbjct: 7 YDVIVVGAGHAGIEAALASARMGEAVLLITQTLDSAGRLSCNPSIGGISKGNIVREIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG++ADA+ IQ+R+LN +GPAV+ PR QAD+ LY + I ++NL V Q V Sbjct: 67 GGEMGKLADASMIQYRLLNKSRGPAVQAPRVQADKFLYSQLAKHAIELEKNLHVFQDTVI 126 Query: 126 GF---------NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGD 176 + EK + + + VVL TGTF+ G I+IG+ + P GR+G+ Sbjct: 127 DIVSSNTNESGHVEKGSVQYVKTERGREFSAKAVVLATGTFMEGKIYIGEYESPDGRLGE 186 Query: 177 SPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR 236 + L + K F GRLKTGTP R+ ++ TE+Q ADE + PFSF +I Sbjct: 187 RAAIGLGPALAKKGFTVGRLKTGTPMRILRRSFDSSLTEEQEADEIMRPFSFTNAEIHRP 246 Query: 237 QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLE 296 +C IT TN ETH II EN+ +A++SG I G RYCPSIEDKI +F ER+ H +++E Sbjct: 247 YAKCYITHTNQETHDIIRENLHRAALFSGKITGTGARYCPSIEDKIKKFPERDRHHVYIE 306 Query: 297 PEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLE 356 PEGLNT+ +Y NG+S++LPE++Q + IRTIP + V I RP YA++Y Y++P +L L+ Sbjct: 307 PEGLNTEELYINGLSSSLPEDVQDRMIRTIPCFKDVIITRPAYAVDYAYVSPIQLSSDLQ 366 Query: 357 TKKISGLFLAGQINGTTGYEEAAAQGLVAGINSAR-------KSNKLDCICFSRTDSYIG 409 T++I GLFLAGQINGT+GYEEA QG++AGIN+A K K R ++YIG Sbjct: 367 TRRIEGLFLAGQINGTSGYEEAGGQGIIAGINAALFSRSLKFKDEKYIPFVLKRDEAYIG 426 Query: 410 VMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQ 469 VMIDDL ++GV EPYRMFT+RAEYR++LR D AD RLT ++G + R + + Sbjct: 427 VMIDDLVTQGVDEPYRMFTARAEYRLNLRHDTADERLTERAYQIGLQTKEASDRLKEKLL 486 Query: 470 EYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFS 529 + SL K + +T ++ GK+ + L P S++ + SI +++ +S Sbjct: 487 TRERIISLWKDIKITRDLIAKNPELKNHIGKSLA--DALHDPQVSLECICSIDENSKDYS 544 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 + ++E ++E Y Y Q + ++K E IP DFDY ++ LS E + +L ++P Sbjct: 545 AELLESAELEIRYEHYIAVQNRKIAKVKRMENTKIPADFDYDAVSGLSTESRARLKEVRP 604 Query: 590 FNLLQASKIEGMTPAALNLLLIYI 613 + QAS+I G+ P+ + LL I + Sbjct: 605 ETIGQASRIRGIRPSDIMLLSILL 628 >gi|315168441|gb|EFU12458.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis TX1341] Length = 632 Score = 496 bits (1276), Expect = e-138, Method: Compositional matrix adjust. Identities = 271/625 (43%), Positives = 384/625 (61%), Gaps = 16/625 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+G GHAG EAA AA++G T L+T + M CNP++GG KG +VREIDA Sbjct: 8 SYDVIVVGAGHAGSEAALAAARMGVKTLLLTINLDMVAFMPCNPSVGGPAKGVVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ R+LN KGPAVR R QAD+ Y M+ I +ENL + QG V Sbjct: 68 LGGEMGKNIDKTYIQMRMLNTGKGPAVRALRAQADKHAYATEMKHTIEKEENLTLRQGIV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + +V + R VV+T GT LRG I IG+LK +G PS L N Sbjct: 128 EELIVEDGVCRGVVTSTGAAYRSQAVVITAGTALRGEIIIGELKYSSGPNNSQPSVGLAN 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNRQIE-CGI 242 + + R KTGTP R+ TI + TE+Q D+ FS+ T D N+ E C + Sbjct: 188 HLKELGLEIDRFKTGTPPRVKSSTIDYSVTEEQPGDKEPNHFSYSTPDSAYNQNQEPCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II +N+ + +++G ++ G RYCPSIEDKIVRF ++ HQ+FLEPEGLNT Sbjct: 248 TYTNETTHEIIQKNLHRAPMFTGIVEGVGARYCPSIEDKIVRFADKPRHQLFLEPEGLNT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q + + +I GLEKV ++R GYAIEYD + P +L PTLETK I Sbjct: 308 EEVYVQGLSTSLPEDVQTEMLHSIEGLEKVEMMRTGYAIEYDVVVPHQLRPTLETKVIEN 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQ NGT+GYEEAA QGL+AGIN+A K + + R+D YIGVMIDDL +KG E Sbjct: 368 LYTAGQTNGTSGYEEAAGQGLMAGINAALKIQGKEPLVLKRSDGYIGVMIDDLVTKGTNE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRS----LL 478 PYR+ TSRAEYR+ LR DNAD RLT +G ++G + +++++A Y+ + + + L Sbjct: 428 PYRLLTSRAEYRLILRHDNADLRLTEMGHEIGLV---KEEQYAAYLVKKAAVEAEIARLG 484 Query: 479 KSLVLTSKN----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARK-FSSLVI 533 K + +K L + + +DG A +FL P+ S Q + P + VI Sbjct: 485 KHRIKPTKEVQAFLETKGAAGLKDGI--LARDFLKRPEISYQEVAQFIPAPEEALDPKVI 542 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I+ Y Y + M + +++K E + IP++ DY ++ L+ E K+KL ++P + Sbjct: 543 EQVEIQIKYEGYIKKAMEKVEKLKRMEAKRIPENIDYQAINGLATEAKQKLQKIQPETIA 602 Query: 594 QASKIEGMTPAALNLLLIYIKKNTV 618 QAS+I G+ PA +++L++YI++ + Sbjct: 603 QASRISGVNPADISILMVYIEQGKI 627 >gi|291539800|emb|CBL12911.1| glucose-inhibited division protein A [Roseburia intestinalis XB6B4] Length = 657 Score = 495 bits (1275), Expect = e-138, Method: Compositional matrix adjust. Identities = 268/647 (41%), Positives = 383/647 (59%), Gaps = 36/647 (5%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 I +YDV+V+G GHAGCEAA A+LG T + T +I M CNP IGG KGHLVRE Sbjct: 4 IEENYDVVVVGAGHAGCEAALACARLGLETIIFTVSVDSIAMMPCNPNIGGSSKGHLVRE 63 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G MG D IQ ++LN KGPAV R QAD+ Y + M++ + + E+L + Q Sbjct: 64 IDALGGQMGINIDKTFIQSKMLNKSKGPAVHSLRAQADKVNYSMEMRKTLQNTEHLTIRQ 123 Query: 122 GEVAGF-----NTEKNIISSIVMQDNSMI--------------------RCSTVVLTTGT 156 EVA N+ S++ +D M+ C VVL TGT Sbjct: 124 AEVAEIITVPANSADGETSAVEKKDGQMVEINGELQKITGVKTVSGGVYHCKAVVLCTGT 183 Query: 157 FLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEK 216 +LR G++ G G +N L +S + R KTGTPAR+D +++ + K ++ Sbjct: 184 YLRARCLTGEMITYTGPNGLMAANHLTDSLKAHGIEMFRFKTGTPARVDKRSLDFSKMQE 243 Query: 217 QFADERLIPFSFMT--DKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRY 274 Q DER++PFSF T + + Q+ C +T TN +TH II N+ S IY+G I+ GPRY Sbjct: 244 QKGDERVVPFSFTTNPEDVQIDQVSCWLTYTNPKTHEIIRANLDRSPIYAGIIEGTGPRY 303 Query: 275 CPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNI 334 CPSIEDK+V+F +++ HQIF+EPEG+NT+ +Y G+S++LPE++QH+ RT+PG+E V I Sbjct: 304 CPSIEDKVVKFADKDRHQIFIEPEGINTNEMYVGGMSSSLPEDVQHEMYRTLPGMEHVKI 363 Query: 335 IRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSN 394 +R YAIEYD INP +L+ +LE KKI GLF GQ NG++GYEEAA QGL+AGIN+A Sbjct: 364 VRNAYAIEYDCINPDQLYASLEFKKIKGLFSGGQFNGSSGYEEAACQGLIAGINAAMSIL 423 Query: 395 KLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLG 454 + + R+++YIGV+IDDL +K EPYRM TSRAEYR+ LR DNAD RLT G ++G Sbjct: 424 GKEPLVLDRSEAYIGVLIDDLVTKENHEPYRMMTSRAEYRLLLRQDNADLRLTKKGYEIG 483 Query: 455 CIGERRQKRFAK----YIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAY--EFL 508 I + R K QE + + K + +K + S+ + E + Sbjct: 484 LISKERYDWVCKKEELIAQE---IERVAKVKIGANKKVQELLESYDSIPLNTGTFLTELI 540 Query: 509 SYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDF 568 P+ L I P+ + V E++ I Y Y RQM + + K EK+ IP++F Sbjct: 541 RRPELDYDKLAPIDPERPDLPAEVAEQVNISIKYDGYIKRQMKQVESFKKLEKKKIPENF 600 Query: 569 DYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 +Y +P+L E ++KL P ++ QAS+I G++PA +++LL+Y+++ Sbjct: 601 NYDDVPSLRIEARQKLKTYSPTSIGQASRISGVSPADVSVLLVYMEQ 647 >gi|104774815|ref|YP_619795.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|123378327|sp|Q1G7Z5|MNMG_LACDA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|103423896|emb|CAI98938.1| GidA (Glucose inhibited division protein A) [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 631 Score = 495 bits (1275), Expect = e-138, Method: Compositional matrix adjust. Identities = 267/622 (42%), Positives = 376/622 (60%), Gaps = 13/622 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 ++ YDVIV+G GHAGCEAA +A++G T L+T + M CNP++GG KG +VRE Sbjct: 5 VSNEYDVIVVGAGHAGCEAALASARMGEKTLLLTISLDMVAFMPCNPSVGGPAKGTVVRE 64 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G MG+ D IQ R+LN KGPAVR R QAD+ Y M+R I + NL + Q Sbjct: 65 IDALGGEMGKNIDKTYIQMRMLNTGKGPAVRALRAQADKWDYHEEMKRTIENTPNLTLRQ 124 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E +V + R +VVLTTGT RG I IG+L +G P+ Sbjct: 125 AVVDDLIVEDGECRGVVTNTGARYRAKSVVLTTGTAARGRIFIGELNYSSGPNNTIPAIK 184 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT---DKITNRQI 238 L S + F R KTGTP R++ TI + KTE++ D+ FSF + D +T+ Q Sbjct: 185 LSESLERLGFKLRRFKTGTPPRVNRHTIDYSKTEEEPGDKEPRHFSFTSRDEDYLTD-QT 243 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C +T TN +TH II EN+ S ++SGDI GPRYCPSIE K+VRF +++ HQIFLEPE Sbjct: 244 SCWMTYTNPKTHEIINENLDRSPMFSGDIVGVGPRYCPSIETKVVRFADKDRHQIFLEPE 303 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 G T+ +Y ST++PEE+Q + + T+ GLEKV ++RPGYAIEYD ++P +L TLETK Sbjct: 304 GRKTEEIYVGDFSTSMPEEVQLEMLHTVAGLEKVEMMRPGYAIEYDVVDPWQLTHTLETK 363 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 +I L++AGQ+NGT+GYEEAA QGL+AGIN+A + R ++YIGV+IDDL +K Sbjct: 364 RIKHLYMAGQMNGTSGYEEAAGQGLIAGINAALSAEGKPAFTLGRDEAYIGVLIDDLVTK 423 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYR+ TSRAEYR+ LR DNAD RLT G LG I + R+A+++ + ++ L Sbjct: 424 GTEEPYRLLTSRAEYRLLLRHDNADLRLTEKGHDLGLIDD---DRYAEFLAKKELIQEDL 480 Query: 479 KSL-VLTSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLV 532 L +T + + G+T A FL P +++++ + V Sbjct: 481 DRLGEITVHPTIAVNEYLAGLGQTDLNGGVKADVFLRRPRVTVEDVERLTGQKLAGDRYV 540 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 E+++I+ YA Y +Q I+ ++ +E + IPKD DY + L+ E +EKL+ ++P L Sbjct: 541 KEQVEIDIKYAGYIKKQEIQVARLRRQEAKKIPKDIDYDQIEGLATEAREKLAKIRPETL 600 Query: 593 LQASKIEGMTPAALNLLLIYIK 614 QA +I G+ PA L +L +Y++ Sbjct: 601 AQAERISGVNPADLAILSVYVQ 622 >gi|261368858|ref|ZP_05981741.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Subdoligranulum variabile DSM 15176] gi|282569044|gb|EFB74579.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Subdoligranulum variabile DSM 15176] Length = 630 Score = 495 bits (1275), Expect = e-138, Method: Compositional matrix adjust. Identities = 263/624 (42%), Positives = 385/624 (61%), Gaps = 9/624 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAG EAA AA LGA TA+ T IG+M CNP+IGG KGHLVRE+DA Sbjct: 6 NYDVIVVGAGHAGIEAAHAAAVLGAKTAVFTLTLDFIGNMPCNPSIGGTAKGHLVREVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLMG ADA +Q R+LN KGPAV R Q DR+ Y + M+ + NLD+ Q E+ Sbjct: 66 LGGLMGIAADATFLQSRMLNRGKGPAVHSLRVQTDRKRYHIWMKHALEKTANLDIHQAEI 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 G + + I +V C V+ TGT L G I +G+ G G + L Sbjct: 126 VGVDVQDGRIVGVVTALGGYYGCKACVIATGTTLGGRIFVGEAHYDGGPDGTHAATQLTK 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFAD--ERLIPFSFMTDKITNRQIECGI 242 S + F R KTGTPAR+ ++I + K E Q D E L PFSF+T + ++ C I Sbjct: 186 SLVSHGFTLRRFKTGTPARVHRRSIDFSKLECQPGDPDELLQPFSFLTRTPMHNKVNCYI 245 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 TN +TH++I++N+ S +Y GDI+ GPRYCPSIEDK+VRF ++ H +F+EP G +T Sbjct: 246 AYTNPQTHQVILDNLDRSPLYGGDIQGVGPRYCPSIEDKVVRFKDKQRHPVFVEPCGEDT 305 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + +Y G+S++LPE +Q+ RTI G E + I+RP YAIEYD ++P L PTLE+K ++G Sbjct: 306 EEMYLQGLSSSLPEAVQNAMYRTIVGFEHLEIMRPAYAIEYDCVDPTTLKPTLESKVVAG 365 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 ++ AGQ NGT+GYEEAAAQGL+AG+N+AR + + +R SY+G ++DDL +KGV++ Sbjct: 366 IYGAGQFNGTSGYEEAAAQGLLAGLNAARHALGKSELVLARHTSYLGTLVDDLVTKGVMD 425 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRM TSR+EYR+SLR DNAD RLTPIG + G + + +R+A + ++ + ++ LK L Sbjct: 426 PYRMMTSRSEYRLSLRQDNADERLTPIGREYGLVDD---ERWAVFCRDRDIKQAELKRLE 482 Query: 483 ---LTSKNLSSTSISFKQDGKT-RTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 + +L + + G++ TA E + P + + + ++ + + +R++ Sbjct: 483 NAHIKLADLRAVVPEGTELGESGGTAAELMRRPAVTYERIAAVIGRGEGVTPAMAQRIET 542 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E YA Y R+ ++I+ E+ IP+DFDY+ + ++ E +EKLS ++P L QA +I Sbjct: 543 EIRYAGYIAREERIIRDIQRHEQVAIPEDFDYAPIETMTLEAREKLSKIRPRTLAQAGRI 602 Query: 599 EGMTPAALNLLLIYIKKNTVKLNE 622 G++P+ L L I + K + E Sbjct: 603 PGVSPSDLAQLSIALLKTRSQQKE 626 >gi|322412884|gb|EFY03792.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 632 Score = 495 bits (1275), Expect = e-138, Method: Compositional matrix adjust. Identities = 268/618 (43%), Positives = 374/618 (60%), Gaps = 6/618 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAG EA+ +++G T L T + M CNP+IGG KG +VREIDA Sbjct: 8 SYDVIVIGAGHAGVEASLATSRMGCKTLLATINLDMLAFMPCNPSIGGSAKGIVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ ++LN KGPAVR R QAD+ LY M+ + Q NL + Q + Sbjct: 68 LGGEMGKNIDKTYIQMKMLNTGKGPAVRALRAQADKSLYAREMKHTVEKQANLTLRQTMI 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ VV+TTGT LRG I +G+LK +G S +L + Sbjct: 128 DDILVEDGRVVGVLTATGQKFAAKAVVVTTGTALRGEIILGELKYSSGPNNSLASVTLAD 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--NRQIECGI 242 + KF + GR KTGTP R+ +I +D+TE Q D++ FSFM+ QI C + Sbjct: 188 NLKKFGLEIGRFKTGTPPRVKASSIDYDQTEIQPGDDKPNHFSFMSKDADYLKDQIPCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +H II +N+ + ++SG +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG +T Sbjct: 248 TYTNQISHDIINQNLYRAPMFSGIVKGVGPRYCPSIEDKIVRFSDKERHQLFLEPEGRDT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q + I +I GLEK ++R GYAIEYD + P +L TLETK ISG Sbjct: 308 EEVYVQGLSTSLPEDVQKELIHSIKGLEKAEMMRTGYAIEYDIVLPHQLRATLETKLISG 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQ NGT+GYEEAA QG++AGIN+A K + R+D+YIGVMIDDL +KG LE Sbjct: 368 LFTAGQTNGTSGYEEAAGQGIIAGINAALKVQGKPELILKRSDAYIGVMIDDLVTKGTLE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFA-KYIQEYNFLRSL--LK 479 PYR+ TSRAEYR+ LR DNAD RLT IG +G + + R F K Q N L+ L +K Sbjct: 428 PYRLLTSRAEYRLILRHDNADMRLTEIGRDIGLVDDDRWNAFEIKKNQFDNELKRLDSIK 487 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQI 538 + N + FK TA EF+ P+ + S + A + +IE L+ Sbjct: 488 LKPIKETNDRVQDLGFKPLTDAMTAKEFMRRPEIDYATVVSFVGSAAEDLDAKIIELLET 547 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E Y Y + + + ++K E++ IP + D+ ++ +++ E ++K + P + QAS+I Sbjct: 548 EIKYEGYIRKALDQVAKMKRMEEKRIPANIDWDTIDSIATEARQKFKKINPETIGQASRI 607 Query: 599 EGMTPAALNLLLIYIKKN 616 G+ PA +++L+IY++ N Sbjct: 608 SGVNPADISILMIYLEGN 625 >gi|319946008|ref|ZP_08020257.1| glucose inhibited division protein A [Streptococcus australis ATCC 700641] gi|319747816|gb|EFW00061.1| glucose inhibited division protein A [Streptococcus australis ATCC 700641] Length = 635 Score = 495 bits (1275), Expect = e-138, Method: Compositional matrix adjust. Identities = 265/625 (42%), Positives = 382/625 (61%), Gaps = 26/625 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IVIG GHAG EA+ A+++G L T + + CNP+IGG KG +VRE+DAL Sbjct: 9 YDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFLPCNPSIGGSAKGIVVREVDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + D + IQ ++LN KGPAVR R QAD+ELY M+R + +QENL + Q Sbjct: 69 GGEMAKNIDKSYIQMKMLNTGKGPAVRALRAQADKELYSKEMRRTVENQENLTLRQ---- 124 Query: 126 GFNTEKNIISSIVMQDNSMIRCST----------VVLTTGTFLRGVIHIGKLKIPAGRMG 175 +I I+++D +I T V++TTGT LRG I IG LK +G Sbjct: 125 ------TMIDEILVEDGKVIGVRTATHQEYGAKAVIVTTGTALRGEIIIGDLKYSSGPNH 178 Query: 176 DSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKI 233 S +L ++ + GR KTGTP R+ +I +++TE Q DE FS+ + + Sbjct: 179 SLASINLADNLKNLGLEIGRFKTGTPPRVKASSINYEETEIQPGDENPNHFSYNSRDEDY 238 Query: 234 TNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQI 293 QI C +T TN ++H II N+ + +++G +K GPRYCPSIEDKIVRF ++ HQ+ Sbjct: 239 LKDQIPCWLTYTNSQSHEIINSNLHRAPMFTGVVKGVGPRYCPSIEDKIVRFADKERHQL 298 Query: 294 FLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFP 353 FLEPEG NT+ VY G+ST+LPE++Q + +I GLE ++R GYAIEYD + P +L Sbjct: 299 FLEPEGRNTEEVYVQGLSTSLPEDVQRDLVHSIKGLENAEMMRTGYAIEYDMVLPHQLRA 358 Query: 354 TLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMID 413 TLETKKISGLF AGQ NGT+GYEEAA QG+VAGIN+A K + R+D YIGVMID Sbjct: 359 TLETKKISGLFTAGQTNGTSGYEEAAGQGIVAGINAALKIQGKPELILKRSDGYIGVMID 418 Query: 414 DLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF-AKYIQEYN 472 DL +KG +EPYR+ TSRAEYR+ LR DNAD RLT IG ++G + + R RF K Q N Sbjct: 419 DLVTKGTVEPYRLLTSRAEYRLILRHDNADMRLTEIGREVGLVDDERWARFETKKYQFEN 478 Query: 473 FLRSL--LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFS 529 ++ L +K + N ++ FK TA EFL P+ S Q++ + I P + Sbjct: 479 EMKRLDSIKLKPVKETNEKVAALGFKPLTDAVTAKEFLRRPEVSYQDVVNFIGPATEELD 538 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 +IE ++ E Y Y + + + +++K E++ IP + D+ + +++ E ++K ++ P Sbjct: 539 DKIIELIETEIKYEGYISKALDQVEKMKRMEEKRIPANIDWDDIDSIATEARQKFKLINP 598 Query: 590 FNLLQASKIEGMTPAALNLLLIYIK 614 + QAS+I G+ PA +++L++Y++ Sbjct: 599 ETIGQASRISGVNPADISILMVYLE 623 >gi|312865810|ref|ZP_07726032.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus downei F0415] gi|311098685|gb|EFQ56907.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus downei F0415] Length = 632 Score = 495 bits (1275), Expect = e-138, Method: Compositional matrix adjust. Identities = 269/628 (42%), Positives = 385/628 (61%), Gaps = 26/628 (4%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+G GHAG EAA A+++G T L T + M CNP+IGG KG +VREIDA Sbjct: 8 NFDVIVVGAGHAGVEAALAASRMGCKTLLATINLEMLAFMPCNPSIGGSAKGIVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ ++LN KGPAVR R QAD+ LY M+ + QENL + Q Sbjct: 68 LGGEMGKNIDKTYIQMKMLNTGKGPAVRALRAQADKALYAREMKHTVEKQENLTLRQ--- 124 Query: 125 AGFNTEKNIISSIVMQDNSMIRCST----------VVLTTGTFLRGVIHIGKLKIPAGRM 174 ++I I+++D ++ T VV+TTGT LRG I +G+LK +G Sbjct: 125 -------SLIDDILVEDGHVVGVETATGIKYGAKAVVVTTGTALRGEIILGELKYSSGPN 177 Query: 175 GDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DK 232 S +L ++ K + GR KTGTP R+ +I +++TE Q D + FSF++ + Sbjct: 178 NSLASITLADNLKKLGLEIGRFKTGTPPRVKASSINYEETEIQPGDGKPNHFSFLSRDED 237 Query: 233 ITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQ 292 QI C +T TN +H II +N+ + ++SG +K GPRYCPSIEDKIVRF +++ HQ Sbjct: 238 YLKDQIPCWLTYTNQSSHDIINKNLYRAPMFSGVVKGVGPRYCPSIEDKIVRFADKDRHQ 297 Query: 293 IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF 352 +FLEPEG +T+ VY G+ST+LPE++Q + +I GLE+ ++R GYAIEYD + P +L Sbjct: 298 LFLEPEGRDTEEVYIQGLSTSLPEDVQRDLVHSIKGLEQAEMMRTGYAIEYDIVLPHQLR 357 Query: 353 PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMI 412 TLETK ISGLF AGQ NGT+GYEEAA QG+VAGIN+A K + R+D+YIGVMI Sbjct: 358 ATLETKVISGLFTAGQTNGTSGYEEAAGQGIVAGINAALKVQGKPELILKRSDAYIGVMI 417 Query: 413 DDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFA-KYIQEY 471 DDL +KG LEPYR+ TSRAEYR+ LR DNAD RLTPIG ++G + E R + K Q Sbjct: 418 DDLVTKGTLEPYRLLTSRAEYRLILRHDNADIRLTPIGRQVGLVDEERWLNYEIKKAQFD 477 Query: 472 NFLRSLLKSLVLTSK--NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKF 528 N ++ L + +K N ++ FK TA EF+ P+ S ++ I P A Sbjct: 478 NEMKRLSTHKLKPTKDTNREVQAMGFKPLTDAVTAKEFMRRPEVSYADIIRFIGPAAENL 537 Query: 529 SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 S +IE L+ E Y Y + + + ++K E++ IP + D+ + +++ E ++K + Sbjct: 538 SPKLIELLETEIKYEGYINKALDQVAKMKRMEEKRIPANIDWDDIDSIATEARQKFKKIN 597 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIKKN 616 P + QAS+I G+ PA +++L++Y++ N Sbjct: 598 PETIGQASRISGVNPADISILMVYLEGN 625 >gi|158520974|ref|YP_001528844.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Desulfococcus oleovorans Hxd3] gi|158509800|gb|ABW66767.1| glucose inhibited division protein A [Desulfococcus oleovorans Hxd3] Length = 623 Score = 495 bits (1275), Expect = e-138, Method: Compositional matrix adjust. Identities = 261/617 (42%), Positives = 378/617 (61%), Gaps = 7/617 (1%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 ++YD+IV+G GHAGCEAA AA++G + L+ + +M C+P+IGG KGHLV+EI Sbjct: 5 EKTYDIIVVGAGHAGCEAALAAARMGCAVLLLAIDLDKVAAMPCSPSIGGTAKGHLVKEI 64 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G M + AD I +VLN KKGPA+ RTQ D+ Y AM++ + + N+D+ Sbjct: 65 DALGGEMPKAADKTAIHCKVLNTKKGPAIHSSRTQNDKHRYHTAMKQSVEAHANIDLKAA 124 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 V E + ++ Q + + V++T GTFL G++HIG AGR G+ + L Sbjct: 125 LVTRIIVEGGSVKGVIDQTGFSWQATCVIITAGTFLGGLVHIGTHSHHAGRAGEFAALEL 184 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KITNRQIEC 240 + + F TGR+KTGTP RL +I + K E Q +D PFS T ++ R Sbjct: 185 ADCLRELGFATGRMKTGTPPRLSRPSIDFSKFEMQGSDADFRPFSAATRALELPRRPNYL 244 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 G R N + I+ N+ HSA+YSG I RYCPS EDK+VRF ER H + LE EGL Sbjct: 245 GHIREN--SIAIVRNNLAHSALYSGRITGTPARYCPSFEDKVVRFPERTAHHLILEFEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 ++D +Y +G+ +LP EIQ F+R++ GLE I+RP YAIEYDYINP +L PTLETK + Sbjct: 303 DSDEIYASGLGNSLPMEIQLAFVRSVEGLECAEIMRPAYAIEYDYINPTQLLPTLETKPV 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 +GL+LAGQ+NGT+GYEEAAAQG+ AGIN+A + K R+++Y+GVMIDDL ++G Sbjct: 363 AGLYLAGQVNGTSGYEEAAAQGMWAGINAACRVQKRPPFVLDRSEAYMGVMIDDLVTRGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RL G++LG + + +R Y +K+ Sbjct: 423 SEPYRMFTSRAEYRLLLREDNADLRLAEKGLELGLVDKETVERIRGYKHRIKAEIQRVKT 482 Query: 481 LVLTSKNLSSTSISFKQDGKTRT---AYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 V+ + ++ ++ +Q + A + L + + ++ ++ P V ++++ Sbjct: 483 TVIKPDDKTNALLARRQSPPLTSGSRADQLLKRSEITYADIKTLAPPETPLPERVEQQVE 542 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 IE Y Y RQ E + K E IP+ FDY+++ LSNELK +L+ ++P +L QA++ Sbjct: 543 IEVKYEGYIDRQRREIAKFKDLEMIRIPEGFDYTAVHGLSNELKTRLADMRPLSLGQAAR 602 Query: 598 IEGMTPAALNLLLIYIK 614 IEG+TPAA+++L+I IK Sbjct: 603 IEGITPAAISVLMIGIK 619 >gi|41058579|gb|AAR99274.1| glucose-inhibited division protein A [Candidatus Blochmannia castaneus] Length = 598 Score = 495 bits (1275), Expect = e-138, Method: Compositional matrix adjust. Identities = 274/586 (46%), Positives = 365/586 (62%), Gaps = 15/586 (2%) Query: 40 TIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQAD 99 T+G MSCNPA+GG+GKGHLV+EIDA+ G+M AD AGIQFR+LN KG AVR R QAD Sbjct: 1 TLGQMSCNPAVGGIGKGHLVKEIDAMGGVMAYAADKAGIQFRILNSSKGAAVRATRAQAD 60 Query: 100 RELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCST-VVLTTGTFL 158 + LYR ++ + Q+ L +IQ V +KN I +V+ M ST VVLTTGTFL Sbjct: 61 KILYRQVIRSVLEYQKFLSIIQASVEDLIIDKNKIVGVVVPKIGMKFSSTSVVLTTGTFL 120 Query: 159 RGVIHIGKLKIPAGRMGDSPSNSLFNSFMK-FDFDTGRLKTGTPARLDGKTIIWDKTEKQ 217 G IHIG GR GD S+SL + +K RLKTGT R+ I + Q Sbjct: 121 NGKIHIGMKNFSGGRAGDVESSSLLSERLKGLSLRVNRLKTGTSPRVHANGINFGSLIAQ 180 Query: 218 FADERLIPFSFM-TDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCP 276 ++D + FSFM + + Q+ C IT TN TH I+ N+ S +Y+G IK PRYCP Sbjct: 181 YSDNPIPVFSFMGSTEQHPAQVPCYITHTNNNTHEIVRSNLYQSPMYAGLIKGRSPRYCP 240 Query: 277 SIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIR 336 SIEDKI RF +R+ HQIFLEPEGL T +Y NGIST+LP +Q Q IR+I GLE V+IIR Sbjct: 241 SIEDKITRFADRDAHQIFLEPEGLTTPEIYLNGISTSLPFYVQIQMIRSIRGLENVHIIR 300 Query: 337 PGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKL 396 PGYAIEYD+ +P++L TLE+K +SGLF +GQINGTTGYEEAAAQGL+AGIN+AR S Sbjct: 301 PGYAIEYDFFDPRDLKLTLESKFVSGLFFSGQINGTTGYEEAAAQGLLAGINAARFSQNK 360 Query: 397 DCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCI 456 + R +Y+GV++DDL + G EPYRMFTSRAEYR+SLR DNAD RLT I +LG I Sbjct: 361 EGWYPRRDQAYLGVLVDDLCTHGAEEPYRMFTSRAEYRLSLREDNADLRLTAIAQQLGLI 420 Query: 457 GERRQKRFAKYIQEYNFLRSLLK--------SLVLTSKNLSSTSISFKQDGKTRTAYEFL 508 G+ R K F + R L+ S V+ N T + + +G+ + Sbjct: 421 GKTRWKAFCLKRENIEKERQRLRNTYIFPYSSDVVQLNNFLKTPLMREANGEELLRRPEI 480 Query: 509 SYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDF 568 Y S + F C R+ + E+++I+ Y Y Q E ++ + E L+P D Sbjct: 481 DYAKLSQLSTFGPCILDRQ----IFEQIEIQIKYEGYIRHQQEEIEKYIYNENTLLPTDI 536 Query: 569 DYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIK 614 D+ + LS E+ +KL+ +P+++ QAS+I G+TPAA++ LL+++K Sbjct: 537 DFKVVSGLSKEVIDKLNDCRPYSIGQASRISGITPAAISNLLVWLK 582 >gi|313124783|ref|YP_004035042.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmg [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312281346|gb|ADQ62065.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 631 Score = 495 bits (1275), Expect = e-138, Method: Compositional matrix adjust. Identities = 267/622 (42%), Positives = 375/622 (60%), Gaps = 13/622 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 ++ YDVIV+G GHAGCEAA +A++G T L+T + M CNP++GG KG +VRE Sbjct: 5 VSNEYDVIVVGAGHAGCEAALASARMGEKTLLLTIGLDMVAFMPCNPSVGGPAKGTVVRE 64 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G MG+ D IQ R+LN KGPAVR R QAD+ Y M+R I + NL + Q Sbjct: 65 IDALGGEMGKNIDKTYIQMRMLNTGKGPAVRALRAQADKWDYHEEMKRTIENTPNLTLRQ 124 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E +V + R +VVLTTGT RG I IG+L +G P+ Sbjct: 125 AVVDDLIVEDGECRGVVTNTGARYRAKSVVLTTGTAARGRIFIGELNYSSGPNNTIPAIK 184 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT---DKITNRQI 238 L S + F R KTGTP R++ TI + KTE++ D+ FSF + D +T+ Q Sbjct: 185 LSESLERLGFKLRRFKTGTPPRINRHTIDYSKTEEEPGDKEPRHFSFTSRDEDYLTD-QT 243 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C +T TN +TH II EN+ S ++SGDI GPRYCPSIE K+VRF +++ HQIFLEPE Sbjct: 244 SCWMTYTNPKTHEIINENLDRSPMFSGDIVGVGPRYCPSIETKVVRFADKDRHQIFLEPE 303 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 G NT+ +Y ST++PEE+Q + + T+ GLEK ++RPGYAIEYD ++P +L TLETK Sbjct: 304 GRNTEEIYVGDFSTSMPEEVQLEMLHTVAGLEKAEMMRPGYAIEYDVVDPWQLTHTLETK 363 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 +I L++AGQ+NGT+GYEEAA QGL+AGIN+A + R ++YIGV+IDDL +K Sbjct: 364 RIKHLYMAGQMNGTSGYEEAAGQGLIAGINAALSAEGKPAFTLGRDEAYIGVLIDDLVTK 423 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYR+ TSRAEYR+ LR DNAD RLT G LG I + R+A+++ + ++ L Sbjct: 424 GTEEPYRLLTSRAEYRLLLRHDNADLRLTEKGHDLGLIDD---DRYAEFLAKKELIQEDL 480 Query: 479 KSLV-LTSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLV 532 L +T + + G+T A FL P +++++ + V Sbjct: 481 DRLAEITVHPTIAVNEYLAGLGQTDLNGGVKADVFLRRPMVTVEDVERLTGQKLAGDRYV 540 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 E+++I+ YA Y +Q I+ ++ +E + IPKD DY + L+ E +EK + ++P L Sbjct: 541 KEQVEIDIKYAGYIKKQEIQVARLRRQEAKKIPKDIDYDQIEGLATEAREKFAKIRPETL 600 Query: 593 LQASKIEGMTPAALNLLLIYIK 614 QA +I G+ PA L +L +YI+ Sbjct: 601 AQAERISGVNPADLAILSVYIQ 622 >gi|160893419|ref|ZP_02074204.1| hypothetical protein CLOL250_00968 [Clostridium sp. L2-50] gi|156864814|gb|EDO58245.1| hypothetical protein CLOL250_00968 [Clostridium sp. L2-50] Length = 632 Score = 495 bits (1275), Expect = e-138, Method: Compositional matrix adjust. Identities = 265/622 (42%), Positives = 379/622 (60%), Gaps = 11/622 (1%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 ++ +YDV+V+G GHAGCEAA +A+LG T L T ++ M CNP +GG KGHLVR Sbjct: 3 VVEENYDVVVVGAGHAGCEAALASARLGLETILFTVSMDSVAMMPCNPNVGGSSKGHLVR 62 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DAL G MG+ D IQ ++LN KGPAV R QAD+ Y M+ + + ++L + Sbjct: 63 ELDALGGEMGKNIDKTYIQSKMLNASKGPAVHSLRAQADKSNYSRTMKHTLENTDHLVLR 122 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q EV+ ++ + + VVL TGT+L+ G + G G +N Sbjct: 123 QAEVSELMVIDGVVKGVKTFSGATYYAKAVVLCTGTYLKARCIYGDVVNHTGPNGLMAAN 182 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQI 238 L +S + R KTGTPARLD +TI + + E+Q DE ++PFSF + I Q+ Sbjct: 183 HLSDSMKEAGIGIRRFKTGTPARLDKRTIDFSQMEEQKGDEHIVPFSFTNTEEDIKRDQV 242 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C + TN ETH II ENI S ++SG I+ GPRYCPSIEDK+++F ++ HQIF+EPE Sbjct: 243 SCWLCYTNEETHEIIRENINRSPLFSGVIEGTGPRYCPSIEDKVMKFPDKTRHQIFIEPE 302 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 G T+ +Y G+S++LPE++Q++ IR++ GLE V I+R YAIEYD I+ L +LE K Sbjct: 303 GEFTNEMYMGGMSSSLPEDVQYKMIRSMKGLENVRIVRNAYAIEYDCISAINLKHSLEFK 362 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 + GLF AGQ+NG++GYEEAAAQGL+AGIN+ARK + + R+ +YIGV+IDDL +K Sbjct: 363 DVEGLFGAGQLNGSSGYEEAAAQGLMAGINAARKVLGKEPVVLDRSQAYIGVLIDDLVTK 422 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 EPYRM TSRAEYR+ LR DNAD RLT IG ++G I + +R+ K+ Q+ + Sbjct: 423 ETKEPYRMMTSRAEYRLLLRQDNADLRLTDIGHEIGLIDD---ERYEKFCQKRTMIEEET 479 Query: 479 KSLVLTSKNLSSTSISFKQDGKT---RTAY---EFLSYPDFSIQNLFSICPDARKFSSLV 532 K L T +S F + +T +TA E P+ S + + I P+ + + V Sbjct: 480 KRLTETMVGGNSKIQEFLRSMETTELKTAVSLAELTRRPELSYEKIAPIDPERQPLPADV 539 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 IE++ I Y Y RQ + + K EKR+IP D +Y + L E ++KL +KP N+ Sbjct: 540 IEQIDISIKYEGYIKRQTEQVHQFKKLEKRMIPADLNYDDVSNLRKEARQKLKDIKPENI 599 Query: 593 LQASKIEGMTPAALNLLLIYIK 614 QAS+I G++PA +++LL+Y+K Sbjct: 600 GQASRISGVSPADISVLLVYLK 621 >gi|309390344|gb|ADO78224.1| glucose inhibited division protein A [Halanaerobium praevalens DSM 2228] Length = 632 Score = 495 bits (1274), Expect = e-138, Method: Compositional matrix adjust. Identities = 262/622 (42%), Positives = 382/622 (61%), Gaps = 16/622 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIG GHAGCEA+ A++G T +T + M CNP++GG GK H+VREID Sbjct: 8 KEYDVIVIGSGHAGCEASLAPARMGLKTLTLTVSLDHVAFMPCNPSLGGPGKSHIVREID 67 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M + D IQ R+LN KGPAV G R Q+D++ Y M+R + ++NLD+ Q Sbjct: 68 ALGGEMAKNMDQTMIQIRMLNTSKGPAVHGLRGQSDKDKYHKRMKRVLEQEDNLDLKQQI 127 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 E + +V + V+LTTGTFL+G + IG+ + AG P+N L Sbjct: 128 AEKIIVEAGEVKGVVTKTGVFFAGKKVILTTGTFLKGRMIIGEAEFNAGPNQQYPANKLS 187 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 S + R KTGTP R+ K++ + K E Q E + FS+ ++ + Q C +T Sbjct: 188 GSLKDLGINLRRFKTGTPPRVSKKSMDFSKMEPQ-PGEAGLSFSYESEPLKGEQAMCYLT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 T+ TH+II +N + ++SG I GPRYCPSIEDK+VRF ++ HQ+F+EPEGL+TD Sbjct: 247 YTSAATHKIINDNKMRTPLFSGVIDGVGPRYCPSIEDKVVRFPDKGRHQLFIEPEGLDTD 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 Y +G+ST+LP ++Q + RTI GLE V I+RPGYAIEYD ++P+EL LE KK+ GL Sbjct: 307 EYYVSGLSTSLPYDVQIKMARTIKGLENVEIMRPGYAIEYDCVDPEELKLDLELKKVKGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQING++GYEEAA QGLVAGIN+A D + R+++YIGV+IDDL +KG EP Sbjct: 367 YTAGQINGSSGYEEAAGQGLVAGINAALSLQGKDPLILKRSEAYIGVLIDDLVTKGTPEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYI----QEYNFLR---- 475 YR+ TSRAEYR+ LR DNAD RLTPIG K+G + E+R K + + + +++LR Sbjct: 427 YRIMTSRAEYRLLLRQDNADQRLTPIGKKIGLVSEQRYKNYQAKMKAVKKAFSYLRDEQN 486 Query: 476 --SLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVI 533 + K + + L S ++S K + + L P+ S +L + + V Sbjct: 487 QVNPTKEVRAKLEELGSGNLS-----KPVSLEKLLRRPEISYSDLKYFADNLPEIKKDVQ 541 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I+ Y Y RQ + ++ + E++ IP+ DY+ L L E +EKL+ +KP ++ Sbjct: 542 EQVEIQVKYKGYMARQEAQVEQFRKMEEKKIPRSLDYNKLENLRLEAREKLAKIKPLSIG 601 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I G++PA ++ L+IY+++ Sbjct: 602 QASRISGVSPADISALMIYLEQ 623 >gi|240145749|ref|ZP_04744350.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Roseburia intestinalis L1-82] gi|257202165|gb|EEV00450.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Roseburia intestinalis L1-82] Length = 657 Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust. Identities = 266/647 (41%), Positives = 384/647 (59%), Gaps = 36/647 (5%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 I +YDV+V+G GHAGCEAA A+LG T + T +I M CNP IGG KGHLVRE Sbjct: 4 IEENYDVVVVGAGHAGCEAALACARLGLETIIFTVSVDSIAMMPCNPNIGGSSKGHLVRE 63 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G MG D IQ ++LN KGPAV R QAD+ Y + M++ + + E+L + Q Sbjct: 64 IDALGGQMGINIDKTFIQSKMLNKSKGPAVHSLRAQADKVNYSMEMRKTLQNTEHLTIRQ 123 Query: 122 GEVAGF-----NTEKNIISSIVMQDNSMI--------------------RCSTVVLTTGT 156 EVA N+ +++ +D M+ C +VL TGT Sbjct: 124 AEVAEIITVPANSADGETAAVEKKDGQMVEINGELQKITGVKTVSGGVYHCKAIVLCTGT 183 Query: 157 FLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEK 216 +LR G++ G G +N L +S + R KTGTPAR+D +++ + K ++ Sbjct: 184 YLRARCLTGEMITYTGPNGLMAANHLTDSLKAHGIEMFRFKTGTPARVDKRSLDFSKMQE 243 Query: 217 QFADERLIPFSFMT--DKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRY 274 Q DER++PFSF T + + Q+ C +T TN +TH II N+ S IY+G I+ GPRY Sbjct: 244 QKGDERVVPFSFTTNPEDVQIDQVSCWLTYTNPKTHEIIRANLDRSPIYAGIIEGTGPRY 303 Query: 275 CPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNI 334 CPSIEDK+V+F +++ HQIF+EPEG+NT+ +Y G+S++LPE++QH+ RT+PG+E V I Sbjct: 304 CPSIEDKVVKFADKDRHQIFIEPEGINTNEMYVGGMSSSLPEDVQHEMYRTLPGMEHVKI 363 Query: 335 IRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSN 394 +R YAIEYD INP +L+ +LE KKI GLF GQ NG++GYEEAA QGL+AGIN+A Sbjct: 364 VRNAYAIEYDCINPDQLYASLEFKKIKGLFSGGQFNGSSGYEEAACQGLIAGINAAMSIL 423 Query: 395 KLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLG 454 + + + R+++YIGV+IDDL +K EPYRM TSRAEYR+ LR DNAD RLT G ++G Sbjct: 424 EKEPLVLDRSEAYIGVLIDDLVTKENHEPYRMMTSRAEYRLLLRQDNADLRLTKKGYEIG 483 Query: 455 CIGERRQKRFAK----YIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAY--EFL 508 I + R K QE + + K + +K + S+ + E + Sbjct: 484 LISKERYDWVCKKEELIAQE---IERVAKVKIGANKKVQELLESYDSIPLNTGTFLTELI 540 Query: 509 SYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDF 568 P+ L I P+ + V E++ I Y Y RQM + + K EK+ IP++F Sbjct: 541 RRPELDYDKLAPIDPERPDLPAEVAEQVNISIKYDGYIKRQMKQVESFKKLEKKKIPENF 600 Query: 569 DYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 +Y +P+L E ++KL P ++ QAS+I G++PA +++LL+Y+++ Sbjct: 601 NYDDVPSLRIEARQKLKTYSPTSIGQASRISGVSPADVSVLLVYMEQ 647 >gi|303230660|ref|ZP_07317410.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Veillonella atypica ACS-049-V-Sch6] gi|302514715|gb|EFL56707.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Veillonella atypica ACS-049-V-Sch6] Length = 623 Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust. Identities = 262/620 (42%), Positives = 381/620 (61%), Gaps = 16/620 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIGGGHAGCEAA A++G T + T I M CNPA+GG GK HLV E+DA Sbjct: 6 NYDVIVIGGGHAGCEAALACARMGHRTLMATISLDNIALMPCNPAVGGPGKSHLVYELDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG ADA IQ R+LN+ KGPAV R Q+D+ Y+ M+ + + +NL+V Q V Sbjct: 66 LGGQMGINADATAIQMRMLNMGKGPAVHSLRCQSDKIKYQHLMKHTLENTDNLNVKQIMV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ IV + V+L TGT+L+G I IG + G G + Sbjct: 126 TELKVEDGKVTGIVTELGEFYGAKAVILCTGTYLKGKILIGDIDYVGGPNGQRVAEHFSQ 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S + + R KTGTPAR+D +T+ + Q D FSFM + I + C +T Sbjct: 186 SLLDNGVELMRFKTGTPARVDKRTLNIENMAVQEGDAHHHAFSFMDEWINRNEDVCWLTY 245 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN ETH II NI + +YSG I+ GPRYCPSIEDK+VRF ++ HQ+F+EPEG T+ Sbjct: 246 TNKETHEIIKSNIHRAPMYSGKIEGVGPRYCPSIEDKVVRFADKERHQLFVEPEGTGTNE 305 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+ST+LP ++Q+ F+RTIPGLE V I+RP YAIEYD +NP +L P L+ K I GL+ Sbjct: 306 MYVQGMSTSLPMDVQYAFLRTIPGLENVEIMRPAYAIEYDCLNPTQLTPALQVKHIEGLY 365 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ NGT+GYEEAAAQGL+AGIN+A + +R+++YIGV+IDDL +KG EPY Sbjct: 366 SAGQANGTSGYEEAAAQGLMAGINAALWLEGKEPFILARSEAYIGVLIDDLVTKGTNEPY 425 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSR+EYR+ LR DNAD RLT G ++G + + R+ K+ + + ++ L T Sbjct: 426 RMMTSRSEYRLLLRQDNADMRLTEKGREIGLV---KDDRWDKFTAKKAAIEEGMELLRNT 482 Query: 485 SKNLSSTSISFKQDGKTR------TAYEFLSYPDFSIQNLFSICPDA---RKFSSLVIER 535 S N S + + + T AY+ + + S ++ DA ++F+ V E Sbjct: 483 SVNPSKETQALLESLGTAPIKTGIHAYDLVKRNELS----YATVADAFGLKRFTPDVEEA 538 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 + I +Y Y +QM + +++ E++++PK++DY+ + +S E ++KL+ ++P ++ QA Sbjct: 539 MDIAITYEGYIKKQMDQVDKVRKLEEKILPKEWDYTEIKGISLEAQQKLNKIRPHSIGQA 598 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G++PA +++LLI +++ Sbjct: 599 SRISGVSPADVSVLLIQLEQ 618 >gi|242823849|ref|XP_002488142.1| mitochondrial translation optimization protein (Mto1), putative [Talaromyces stipitatus ATCC 10500] gi|218713063|gb|EED12488.1| mitochondrial translation optimization protein (Mto1), putative [Talaromyces stipitatus ATCC 10500] Length = 1096 Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust. Identities = 263/614 (42%), Positives = 375/614 (61%), Gaps = 23/614 (3%) Query: 33 LITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVR 92 L+T S IG SCNP+ GG+GKG ++REIDALDG+ GR+ D AG+ FR+LN KGPAV Sbjct: 66 LVTPSLSNIGVCSCNPSFGGIGKGTMMREIDALDGVAGRIIDKAGVMFRILNRSKGPAVW 125 Query: 93 GPRTQADRELYRLAMQREILSQENLDVIQGEVAGF-----NTEKNIISS-----IVMQDN 142 GPR Q DR+LY+ M+ E++S +NL +I+ +V + E+N S+ I + Sbjct: 126 GPRAQIDRDLYQRYMREELVSTKNLSIIEAKVEDIVVSRDDNEQNSHSAGRIVGIRLDSG 185 Query: 143 SMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPA 202 +I + VV+TTGTFL G IHIG P+GRMG++ ++ L S + F GRLKTGTP Sbjct: 186 QVIPTNRVVITTGTFLGGEIHIGMEAYPSGRMGEAATHGLSKSLRQAGFQLGRLKTGTPP 245 Query: 203 RLDGKTIIWDKTEKQFADERLIPFSFMTDKIT---NRQIECGITRTNLETHRIIMENIKH 259 RLD K+I + E Q D PFSFM + Q+ C +T TN TH++I +N+ Sbjct: 246 RLDKKSIDFSSLEVQRGDSPPNPFSFMNKTVQVGDEGQLTCWMTHTNEATHQVIRDNLDK 305 Query: 260 SAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN-TDVVYPNGISTALPEEI 318 S +K GPRYCPS+E KI+RF + HQI+LEPEG +V+YPNGIS +P E Sbjct: 306 SIHIRETVK--GPRYCPSLEAKIIRFKNKTQHQIWLEPEGFAPNEVIYPNGISMTVPVEA 363 Query: 319 QHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEA 378 Q +RTI GL+ V++++P Y +EYDYI+P+ L PTLETK I GL+LAGQINGTTGYEEA Sbjct: 364 QEAMLRTIRGLKNVHMLQPAYGVEYDYIDPRNLKPTLETKLIGGLYLAGQINGTTGYEEA 423 Query: 379 AAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLR 438 A QG++AG N+ + + +R D YIG+M+DDL ++GV EPYRMFTSR+E+RIS R Sbjct: 424 AGQGILAGTNAGLAAQGKSPMVLTRADGYIGIMVDDLITRGVSEPYRMFTSRSEFRISSR 483 Query: 439 PDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQD 498 DNAD RLT +G + + + R F + L LL++ TS S + D Sbjct: 484 SDNADLRLTAMGREASVVSDERWNHFNDTKSQIEELSRLLENTRYTSNQWSRMGFQTRVD 543 Query: 499 GKTRTAYEFLSYPDFSIQNLFS--ICPD-----ARKFSSLVIERLQIESSYAAYTGRQMI 551 R+ + L +I +L P A F S + +R+ IE+ YA Y RQ + Sbjct: 544 TSYRSGLDMLCVEGINIDSLIPHITSPSGTTYTAASFDSEIKKRVTIEAQYAPYVKRQSL 603 Query: 552 EAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLI 611 A++ + EE+ L+P + DYS++ LS E ++ L ++P N+ +IEG+TP+ +++ Sbjct: 604 MAEKFRREERMLLPSNMDYSAVHGLSTEERQALERVRPENIGMLRRIEGITPSGAVRIMM 663 Query: 612 YIKKNTVKLNEIVL 625 Y++K + + + V+ Sbjct: 664 YLRKGRLVIEDDVV 677 >gi|307153017|ref|YP_003888401.1| glucose inhibited division protein A [Cyanothece sp. PCC 7822] gi|306983245|gb|ADN15126.1| glucose inhibited division protein A [Cyanothece sp. PCC 7822] Length = 634 Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust. Identities = 266/619 (42%), Positives = 374/619 (60%), Gaps = 13/619 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 S+DVIV+G GH+GCEAA A+LG T ++T I CNPA+GG K L E+DA Sbjct: 12 SFDVIVVGAGHSGCEAALATARLGCRTLMLTLNLDKIAWQPCNPAVGGPAKSQLTHEVDA 71 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G +G++AD +Q R+LN +GPAV R Q D+ Y M++ + +QENL + + Sbjct: 72 LGGEIGKMADRTYLQKRILNASRGPAVWALRAQTDKREYAAVMKQIVENQENLFIREAMA 131 Query: 125 AGFNTEKNI-ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 KN + + + V+LTTGTFL G I IG + AGR G+ + L Sbjct: 132 TDLVLGKNDEVIGVQTYFGTCFAAKAVILTTGTFLGGRIWIGGKSMAAGRAGEFAAVGLT 191 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGI 242 ++ + F+TGRLKTGTPAR+D +++ + K E Q D+++ FSF R Q+ C + Sbjct: 192 DTLNQLGFETGRLKTGTPARVDKRSVDYSKLEPQPPDDKVCWFSFDPQAWVEREQMNCYL 251 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 TRT +TH++I +N+ S IY G I S GPRYCPSIEDKIVRF ++ HQIF+EPEG Sbjct: 252 TRTTAKTHQLIRDNLHLSPIYGGFIDSKGPRYCPSIEDKIVRFADKESHQIFIEPEGREI 311 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +Y G ST LPE IQ + T+PGLE ++RP YA+EYDYI + +PTL TKKI G Sbjct: 312 PELYIQGFSTGLPENIQLAMLHTLPGLENCVMLRPAYAVEYDYIPATQCYPTLMTKKIEG 371 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQG+VAGIN+A+ L + F R +SYIG ++DDL +K + E Sbjct: 372 LFCAGQINGTTGYEEAAAQGIVAGINAAQLVKGLPFVVFPREESYIGTLVDDLCTKDLRE 431 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR----QKRFAKYIQEYNFLRSLL 478 PYRM TSR+EYR+ LR DNAD R+TP+G ++G I +RR Q++ A I E L Sbjct: 432 PYRMLTSRSEYRLILRSDNADQRMTPLGREIGLIDDRRWDLFQRKQANIIAEKE---RLY 488 Query: 479 KSLVLTSKNLSSTSISFKQDGKTR---TAYEFLSYPDFSIQNLFSICPDARKFSSLVIER 535 +S + + L +I+ K + K + T + L P F +L + ++ E Sbjct: 489 ESRIKENDELGK-AIAAKTEQKIKGSVTLADLLRRPGFHYADLETYGLGNLDLTTAEKEG 547 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 +I+ Y+ Y RQ + +++ R +P + DY + LS E +EKL+ +KP + QA Sbjct: 548 AEIDIKYSGYIKRQQNQIEQVSRHSNRSLPAELDYMKIDTLSMEAREKLTKVKPLTIGQA 607 Query: 596 SKIEGMTPAALNLLLIYIK 614 S+I G+ PA +N LL+Y++ Sbjct: 608 SRIGGVNPADINALLVYLE 626 >gi|303228569|ref|ZP_07315396.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Veillonella atypica ACS-134-V-Col7a] gi|302516748|gb|EFL58663.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Veillonella atypica ACS-134-V-Col7a] Length = 623 Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust. Identities = 262/620 (42%), Positives = 381/620 (61%), Gaps = 16/620 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIGGGHAGCEAA A++G T + T I M CNPA+GG GK HLV E+DA Sbjct: 6 NYDVIVIGGGHAGCEAALACARMGHRTLMATISLDNIALMPCNPAVGGPGKSHLVYELDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG ADA IQ R+LN+ KGPAV R Q+D+ Y+ M+ + + +NL+V Q V Sbjct: 66 LGGQMGINADATAIQMRMLNMGKGPAVHSLRCQSDKIKYQHLMKHTLENTDNLNVKQIMV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ IV + V+L TGT+L+G I IG + G G + Sbjct: 126 TELKVEDGKVTGIVTELGEFYGTKAVILCTGTYLKGKILIGDIDYVGGPNGQRVAEQFSQ 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S + + R KTGTPAR+D +T+ + Q D FSFM + I + C +T Sbjct: 186 SLLDNGVELMRFKTGTPARVDKRTLNIENMAVQEGDAHHHAFSFMDEWINRNEDVCWLTY 245 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN ETH II NI + +YSG I+ GPRYCPSIEDK+VRF ++ HQ+F+EPEG T+ Sbjct: 246 TNKETHEIIKSNIHRAPMYSGKIEGVGPRYCPSIEDKVVRFADKERHQLFVEPEGTGTNE 305 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+ST+LP ++Q+ F+RTIPGLE V I+RP YAIEYD +NP +L P L+ K I GL+ Sbjct: 306 MYVQGMSTSLPMDVQYAFLRTIPGLENVEIMRPAYAIEYDCLNPTQLTPALQVKHIEGLY 365 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ NGT+GYEEAAAQGL+AGIN+A + +R+++YIGV+IDDL +KG EPY Sbjct: 366 SAGQANGTSGYEEAAAQGLMAGINAALWLEGKEPFILARSEAYIGVLIDDLVTKGTNEPY 425 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSR+EYR+ LR DNAD RLT G ++G + + R+AK+ + + + L T Sbjct: 426 RMMTSRSEYRLLLRQDNADMRLTEKGREIGLV---KDDRWAKFTAKKAAIEEGMALLRNT 482 Query: 485 SKNLSSTSISFKQDGKTRT------AYEFLSYPDFSIQNLFSICPDA---RKFSSLVIER 535 N S + + + T AY+ + + S ++ DA ++F+ V E Sbjct: 483 PVNPSKETQALLESLGTAPIKTGIHAYDLVKRNELS----YATVADAFGLKRFTPDVEEA 538 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 + I +Y Y +QM + ++++ E++++PK++DY+ + +S E ++KL+ ++P ++ QA Sbjct: 539 MDIAITYEGYIKKQMEQVEKVRKLEEKILPKEWDYTEIKGISLEAQQKLNKIRPHSIGQA 598 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G++PA +++LLI +++ Sbjct: 599 SRISGVSPADVSVLLIQLEQ 618 >gi|260437682|ref|ZP_05791498.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Butyrivibrio crossotus DSM 2876] gi|292809908|gb|EFF69113.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Butyrivibrio crossotus DSM 2876] Length = 627 Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust. Identities = 266/619 (42%), Positives = 373/619 (60%), Gaps = 5/619 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+ V+G GHAGCEAA A+LG T + T +I M CNP IGG KGHLVREIDAL Sbjct: 7 YDIAVVGAGHAGCEAALACARLGLETIMFTVSVESIALMPCNPNIGGSSKGHLVREIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG D IQ ++LN KGPAV R QAD+ Y M++ + + E+L + Q EVA Sbjct: 67 GGEMGVNIDKTFIQSKMLNQSKGPAVHSLRAQADKSEYSATMRKTLENTEHLTIRQAEVA 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E +I + + VVL TGT+L+ G + G G +N L S Sbjct: 127 ELMAENGVIKGVKTFSGAEYYTKAVVLCTGTYLKARCIFGDISYYTGPNGLLAANYLSES 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KITNRQIECGIT 243 K + R KTGTPAR+DG+TI +DK E+QF D++++PFSF TD I Q C +T Sbjct: 187 MKKLGIEIVRFKTGTPARVDGRTIDFDKMEEQFGDKKIVPFSFTTDPESIQKEQRSCWLT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH+II +NI S +YSG I GPRYCPSIEDK++RF +++ HQ+F+EPEG T Sbjct: 247 YTNEDTHKIIRDNIDRSPLYSGVIHGTGPRYCPSIEDKVMRFKDKDRHQVFIEPEGNYTH 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 Y G+S++LPE++Q+ +T+PGLE I+R YAIEYD INP +L +LE K ISGL Sbjct: 307 EYYLGGMSSSLPEDVQYAMYKTVPGLEHAKIVRNAYAIEYDCINPNQLKSSLEFKNISGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F GQ+NG++GYEEAAAQGL+AGIN+A K + R+++YIGV+IDDL +K EP Sbjct: 367 FSGGQLNGSSGYEEAAAQGLIAGINAAMKVLNKEPFILDRSEAYIGVLIDDLVTKENKEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEY-NFLRSLLKSLV 482 YRM TSRAEYR+ LR DNAD RL G ++G + + R + + I+ N + L V Sbjct: 427 YRMMTSRAEYRLLLRQDNADIRLYKQGHRIGLLSDERYNKVVEKIKAIDNEIERLKNVSV 486 Query: 483 LTSKNLSSTSISFKQDGKTRTA--YEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 S+ +++ I ++ A E + P+ + + L I + + + VIE++ I Sbjct: 487 GGSEKVNNLLIRYESTPLNNGASLAELIRRPELNYEILGEIDENRPQLDADVIEQVNINI 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y R+ + + K E +LIP D D+ + L E K+KL P ++ QAS+I G Sbjct: 547 KYEGYILREQKQVEHFKKLENKLIPADIDFDDISGLRIEAKQKLKNYSPRSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTVK 619 ++PA + +LL+Y++++ K Sbjct: 607 VSPADITVLLVYMEQHRRK 625 >gi|332824608|ref|XP_003311451.1| PREDICTED: protein MTO1 homolog, mitochondrial isoform 2 [Pan troglodytes] Length = 732 Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust. Identities = 283/670 (42%), Positives = 406/670 (60%), Gaps = 65/670 (9%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA+ G+ T L+TH+ TIG MSCNP+ GG+GKGHL+RE+DAL Sbjct: 37 FDVIVIGGGHAGTEAATAAARCGSRTLLLTHRVDTIGQMSCNPSFGGIGKGHLMREVDAL 96 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGL R+ D +G+ ++VLN +KGPAV G R Q DR+LY+ MQ+EIL+ L V +G V Sbjct: 97 DGLCSRICDQSGVHYKVLNRRKGPAVWGLRAQIDRKLYKQNMQKEILNTPLLTVQEGAVE 156 Query: 126 GF--------NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 +T K +S +V+ D S + +V+LTTGTFLRG+I IG PAGR+GD Sbjct: 157 DLILTEPEPEHTGKCRVSGVVLVDGSTVYAESVILTTGTFLRGMIVIGLETHPAGRLGDQ 216 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR- 236 PS L + K F GRLKTGTP + ++I ++ K D +PFSF + + + Sbjct: 217 PSIGLAQTLEKLGFVVGRLKTGTPPPIAKESINFNILNKHIPDNPSVPFSFTNETVWIKP 276 Query: 237 --QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 Q+ C +T TN I+++N+ ++ + GPRYCPSIE K++RF R HQ++ Sbjct: 277 EDQLPCYLTHTNPRVDEIVLKNLHLNSHVKETTR--GPRYCPSIESKVLRFPNRL-HQVW 333 Query: 295 LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT 354 LEPEG+++D++YP G+S LP E+Q + I I GLEK +I+PGY ++YDY++P+++ P+ Sbjct: 334 LEPEGMDSDLIYPQGLSMTLPAELQEKMITCIRGLEKAKVIQPGYGVQYDYLDPRQITPS 393 Query: 355 LETKKISGLFLAGQINGTTGYEEAAA---------------------------------- 380 LET + LF AGQINGTTGYEEAAA Sbjct: 394 LETHLVQRLFFAGQINGTTGYEEAAAQTECCSVARLECSDMISQVQAILLPQPSLVAGTA 453 Query: 381 ------QGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYR 434 QG++AGIN++ + ++ SRT+ YIGV+IDDLT+ G EPYRMFTSR E+R Sbjct: 454 GMHHNTQGVIAGINASLRVSRKPPFVVSRTEGYIGVLIDDLTTLGTSEPYRMFTSRVEFR 513 Query: 435 ISLRPDNADNRLTPIGMK-LGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS----KNLS 489 +SLRPDNAD+RLT G K GC+ ++R +R S+LKS+ S K + Sbjct: 514 LSLRPDNADSRLTLRGYKDAGCVSQQRYERACWMKSSLEEGISVLKSIEFLSSKWKKLIP 573 Query: 490 STSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA-RKFSSL--VIERLQIESSYAAYT 546 SIS + R A + L Y + + +L P+ +K++ + ERL+IE++Y + Sbjct: 574 EASISTSRSLPVR-ALDVLKYEEVDMDSLAKAVPEPLKKYTKCRELAERLKIEATYESVL 632 Query: 547 GRQMIEAKEIKFEEKRLIPKDFDYSSLP--ALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Q+ E K ++ +E +PKD DY ++ +LS+E++EKL +P + AS+I G+TPA Sbjct: 633 FHQLQEIKGVQQDEALQLPKDLDYLTIRDVSLSHEVREKLHFSRPQTIGAASRIPGVTPA 692 Query: 605 ALNLLLIYIK 614 A+ LL ++K Sbjct: 693 AIINLLRFVK 702 >gi|256848512|ref|ZP_05553954.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus coleohominis 101-4-CHN] gi|256714779|gb|EEU29758.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus coleohominis 101-4-CHN] Length = 645 Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust. Identities = 270/626 (43%), Positives = 367/626 (58%), Gaps = 9/626 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAG EAA AA++G T LIT + M CNP++GG KG +VREIDA Sbjct: 13 NYDVIVVGAGHAGSEAALAAARMGNKTLLITISLEMVAFMPCNPSLGGPAKGIVVREIDA 72 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG D IQ R+LN KGPAVR R QAD+ Y M+ I + NL + QG V Sbjct: 73 LGGEMGHNIDKTYIQMRMLNTGKGPAVRALRAQADKHAYHRQMKLTIEKEPNLTLRQGTV 132 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ + VVLT GT RG I IG+L+ +G + L Sbjct: 133 DDLIVEDGVCKGVITNTGARYGAKAVVLTVGTAARGKIIIGELQYESGPNNSKSATKLSE 192 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK----ITNRQIEC 240 + FD R KTGTP R++G TI +D+TE+Q DE FSF T + QI C Sbjct: 193 CLERLGFDLERFKTGTPPRINGNTIHYDETEEQPGDEEPNHFSFDTPDSQYLALSDQISC 252 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +T TNL TH +I N+ + ++SG IK GPRYCPSIEDKIVRF +++ HQ+FLEPEG Sbjct: 253 WLTYTNLHTHDLIRANLDRAPMFSGVIKGVGPRYCPSIEDKIVRFADKDRHQLFLEPEGR 312 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 +TD Y +G+ST++PEEIQ + + ++ GLE ++RPGYAIEYD + P +L PTLETKKI Sbjct: 313 DTDEYYVDGLSTSMPEEIQQKMLHSVKGLEDAQLMRPGYAIEYDVVAPYQLHPTLETKKI 372 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 L+ AGQ NGT+GYEEAA QGL+AGIN+ R++ R+D+YIGVMIDDL +KG Sbjct: 373 KNLYTAGQTNGTSGYEEAAGQGLIAGINAGRRALGKSPFVLKRSDAYIGVMIDDLVTKGT 432 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYR+ TSRAEYR+ LR DNAD RL G +G + + R + Q L+S Sbjct: 433 KEPYRLLTSRAEYRLILRHDNADFRLMEKGHAIGLVSDERLAKMETKKQHVADEIKRLES 492 Query: 481 LVLTSKNLSSTSISFKQDGKTR---TAYEFLSYPDFSIQNLFSICPD-ARKFSSLVIERL 536 L + K + I D + TA L P + Q L P E++ Sbjct: 493 LRIKPKTAADEFIQANGDNPLKDSLTAAALLRRPYVTYQKLLEFIPSPTTALDRQEAEQV 552 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ YA Y ++ ++ +K E + IP + DY ++ L+ E ++KL ++P L QAS Sbjct: 553 EIQIKYAGYIKKEEVKVNRLKRMEAKKIPANIDYEAIDGLATEGRQKLEKIRPETLAQAS 612 Query: 597 KIEGMTPAALNLLLIYIKKNTV-KLN 621 +I G+ PA L +L +YI++ + K+N Sbjct: 613 RISGVNPADLAILSVYIQQGRIAKIN 638 >gi|332705949|ref|ZP_08426022.1| glucose-inhibited division protein A [Lyngbya majuscula 3L] gi|332355209|gb|EGJ34676.1| glucose-inhibited division protein A [Lyngbya majuscula 3L] Length = 636 Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust. Identities = 267/625 (42%), Positives = 373/625 (59%), Gaps = 5/625 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+G GHAGCEAA +A+LG T L+T I CNPA+G K L E+DA Sbjct: 10 AFDVIVVGAGHAGCEAALASARLGCRTILLTLNLDKIAWQPCNPAVGAPAKSQLTHEVDA 69 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G +G++AD +Q RVLN +GPAV R Q D+ Y M+ + +QENL + + V Sbjct: 70 LGGEIGKMADRTYLQKRVLNCSRGPAVWALRAQTDKREYAAVMKEIVENQENLTLREAMV 129 Query: 125 AGFNTEKN-IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 N + + + S V+LTTGTFL G I +G + AGR G+ + L Sbjct: 130 TDLVLGANDQVIGVQTYFGVAFQASAVILTTGTFLGGRIWVGNKSMSAGRAGEFAAIGLT 189 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGI 242 + + F+TGRLKTGTPAR+D +++ + E Q DE + FSF D R Q+ C + Sbjct: 190 ETLNRLGFETGRLKTGTPARVDKRSVDYSNLEPQPGDEEVRWFSFDPDVWVEREQMYCYL 249 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 TRT ETHR+I +N+ S IY G +++ GPR CPSIEDKIVRF ++ HQIF+EPEG + Sbjct: 250 TRTTSETHRLIRDNLHLSPIYGGWVEAKGPRSCPSIEDKIVRFADKESHQIFIEPEGRDI 309 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +Y G ST LPE +Q Q ++T+PGLE ++RP YA+EYDY+ + +PTL TKKI G Sbjct: 310 PELYIQGFSTGLPENLQLQLLQTLPGLENCAMLRPAYAVEYDYLPATQCYPTLMTKKIEG 369 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQG+VAGIN+ R + + F R +SYIG +IDDL +K + E Sbjct: 370 LFCAGQINGTTGYEEAAAQGIVAGINAVRYVGHQEMVVFPREESYIGTLIDDLCTKDLRE 429 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRM TSR+EYR+ LR DNAD R+TP+G KLG I +RR + + + ++ L+S+ Sbjct: 430 PYRMLTSRSEYRLLLRSDNADRRMTPLGRKLGLIDDRRWQLYQQKQGNITTEKARLQSVR 489 Query: 483 LTSKNLSSTSISFKQDGKTR---TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + +I+ K + T E L P F NL + E +I+ Sbjct: 490 IKEHDPIGIAIASDTQQKIKNSITLAELLRRPGFHYVNLDQYGLGDPNLNQSEREGAEID 549 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ + ++ + R +P D DY+++ LS E +EKLS +KP + QAS++ Sbjct: 550 LKYDGYLKRQQKQIDQVSRQANRQLPPDLDYAAIETLSKESREKLSQVKPMTIGQASRVG 609 Query: 600 GMTPAALNLLLIYIKKNTVKLNEIV 624 G+ PA +N LL+Y++ K +V Sbjct: 610 GVNPADINALLVYLEVRERKFTAVV 634 >gi|78185898|ref|YP_373941.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Chlorobium luteolum DSM 273] gi|78165800|gb|ABB22898.1| Glucose-inhibited division protein A subfamily [Chlorobium luteolum DSM 273] Length = 627 Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust. Identities = 260/624 (41%), Positives = 382/624 (61%), Gaps = 18/624 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV G GHAG EAA ++ G S L+T + + MSCNPAIGG+ KG + REIDAL Sbjct: 8 YDVIVAGAGHAGTEAALAVSRSGLSCLLVTTDLNAVARMSCNPAIGGVAKGQITREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + D+ GIQFR+LN+ KGPA+ PR QADR Y M+R + + NLD++Q V Sbjct: 68 GGEMAKAIDSTGIQFRMLNLSKGPAMHSPRAQADRVAYTAYMKRALEEEVNLDLLQDTVT 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGR-MGDSPSNSLFN 184 G + I+ + + ++ +LT GTFL G+IHIG P GR + + P L Sbjct: 128 GIEQREGILRGVRLLSGRLVTGRAAILTCGTFLNGLIHIGMDHYPGGRTIAEPPVTGLTE 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGIT 243 + + F+ GRLKTGTP R+D +++ + + E+Q DE PFSF T + R Q+ C +T Sbjct: 188 NLILAGFEAGRLKTGTPPRIDRRSVDYSRVEEQKGDENPPPFSFSTPTLKGRAQLSCYVT 247 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 ++ TH I+ S +++G ++ GPRYCPSIEDKI RF +R GH IFLEPEG T+ Sbjct: 248 HSSERTHEILKTGFDRSPLFTGKVQGIGPRYCPSIEDKIFRFPDRPGHHIFLEPEGFETN 307 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y NG ST+LPE+IQ +R++ GLE+V +IR GYAIEYDY P ++ TLETK+I L Sbjct: 308 EMYVNGFSTSLPEDIQIDGLRSMKGLEEVKLIRAGYAIEYDYFPPYQIHSTLETKRIRNL 367 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGT+GYEEAAAQGL+AGIN+A K + R+D+YIGV++DDL +K + EP Sbjct: 368 YFAGQINGTSGYEEAAAQGLLAGINAAADILKRPALRLKRSDAYIGVLVDDLVTKEMKEP 427 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTS AE+R+ LR DNAD RL G + G + + +R ++ +++L + + Sbjct: 428 YRMFTSSAEHRLMLRHDNADIRLMHFGHQSGLVSDAAMERCRTKMRAIGEIKALTEKTAI 487 Query: 484 TSKNLSSTSISFKQDGKTRTA-----YEFLSYPDFSIQNLFSICPDARKFSSLVI----- 533 ++ L S + G+ A + P S++ L + P R+ + L I Sbjct: 488 PAEVLDSL---ISKQGQPHAASGQKISAAIKRPGMSLEILMNSLPPFRE-ALLSISTDKE 543 Query: 534 --ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 ++++I+ Y Y R+++ A +I + IP +++YS + LS+E EKL +P Sbjct: 544 AHQQVEIDLKYEGYLKRELLTADKIARLDALQIPSEYNYSCIKGLSSEGVEKLISHRPET 603 Query: 592 LLQASKIEGMTPAALNLLLIYIKK 615 L QAS+I G++P+ +++L+++I + Sbjct: 604 LGQASRISGVSPSDISVLMVHIGR 627 >gi|205375716|sp|Q3B6Y3|MNMG_PELLD RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A Length = 621 Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust. Identities = 260/624 (41%), Positives = 382/624 (61%), Gaps = 18/624 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV G GHAG EAA ++ G S L+T + + MSCNPAIGG+ KG + REIDAL Sbjct: 2 YDVIVAGAGHAGTEAALAVSRSGLSCLLVTTDLNAVARMSCNPAIGGVAKGQITREIDAL 61 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + D+ GIQFR+LN+ KGPA+ PR QADR Y M+R + + NLD++Q V Sbjct: 62 GGEMAKAIDSTGIQFRMLNLSKGPAMHSPRAQADRVAYTAYMKRALEEEVNLDLLQDTVT 121 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGR-MGDSPSNSLFN 184 G + I+ + + ++ +LT GTFL G+IHIG P GR + + P L Sbjct: 122 GIEQREGILRGVRLLSGRLVTGRAAILTCGTFLNGLIHIGMDHYPGGRTIAEPPVTGLTE 181 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGIT 243 + + F+ GRLKTGTP R+D +++ + + E+Q DE PFSF T + R Q+ C +T Sbjct: 182 NLILAGFEAGRLKTGTPPRIDRRSVDYSRVEEQKGDENPPPFSFSTPTLKGRAQLSCYVT 241 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 ++ TH I+ S +++G ++ GPRYCPSIEDKI RF +R GH IFLEPEG T+ Sbjct: 242 HSSERTHEILKTGFDRSPLFTGKVQGIGPRYCPSIEDKIFRFPDRPGHHIFLEPEGFETN 301 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y NG ST+LPE+IQ +R++ GLE+V +IR GYAIEYDY P ++ TLETK+I L Sbjct: 302 EMYVNGFSTSLPEDIQIDGLRSMKGLEEVKLIRAGYAIEYDYFPPYQIHSTLETKRIRNL 361 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGT+GYEEAAAQGL+AGIN+A K + R+D+YIGV++DDL +K + EP Sbjct: 362 YFAGQINGTSGYEEAAAQGLLAGINAAADILKRPALRLKRSDAYIGVLVDDLVTKEMKEP 421 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTS AE+R+ LR DNAD RL G + G + + +R ++ +++L + + Sbjct: 422 YRMFTSSAEHRLMLRHDNADIRLMHFGHQSGLVSDAAMERCRTKMRAIGEIKALTEKTAI 481 Query: 484 TSKNLSSTSISFKQDGKTRTA-----YEFLSYPDFSIQNLFSICPDARKFSSLVI----- 533 ++ L S + G+ A + P S++ L + P R+ + L I Sbjct: 482 PAEVLDSL---ISKQGQPHAASGQKISAAIKRPGMSLEILMNSLPPFRE-ALLSISTDKE 537 Query: 534 --ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 ++++I+ Y Y R+++ A +I + IP +++YS + LS+E EKL +P Sbjct: 538 AHQQVEIDLKYEGYLKRELLTADKIARLDALQIPSEYNYSCIKGLSSEGVEKLISHRPET 597 Query: 592 LLQASKIEGMTPAALNLLLIYIKK 615 L QAS+I G++P+ +++L+++I + Sbjct: 598 LGQASRISGVSPSDISVLMVHIGR 621 >gi|220907722|ref|YP_002483033.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cyanothece sp. PCC 7425] gi|219864333|gb|ACL44672.1| glucose inhibited division protein A [Cyanothece sp. PCC 7425] Length = 647 Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust. Identities = 270/620 (43%), Positives = 376/620 (60%), Gaps = 7/620 (1%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M+ S+DVIV+G GHAGCEAA AA+LG T L+T I CNPA+GG K L Sbjct: 20 MMQDSFDVIVVGAGHAGCEAALAAARLGCRTLLLTLNLDKIAWQPCNPAVGGPAKSQLTH 79 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DAL G +G++AD +Q R+LN +GPAV R Q D+ Y M+ + +Q NL V Sbjct: 80 EVDALGGEIGKMADRTYLQKRLLNDSRGPAVWALRAQTDKREYAAVMKALVENQPNLTVR 139 Query: 121 QGEVAGF--NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSP 178 +G V N+ +I + C V+LTTGTFL G I +GK + AGR G+ P Sbjct: 140 EGMVTDLLLNSHAEVIG-VETYFGVTFACQAVILTTGTFLGGRIWVGKKSMAAGRAGEFP 198 Query: 179 SNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-Q 237 + L + + F+TGRLKTGTPAR+D +T+ + K E Q D + FSF + R Q Sbjct: 199 AIGLTETLNRLGFETGRLKTGTPARVDKRTVDYSKMEAQPPDNHIRWFSFDPEVWIEREQ 258 Query: 238 IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 + C ITRT TH++I +N+ S +Y G + + GPRYCPSIEDKIVRF ++ HQIF+EP Sbjct: 259 MPCYITRTTALTHQLIRDNLHLSPVYGGWVDAKGPRYCPSIEDKIVRFADKESHQIFIEP 318 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EG +Y G ST LPE IQ + +R++PGLE ++RP YA+EYDY+ + +PTL T Sbjct: 319 EGREIPELYIQGFSTGLPENIQLELLRSLPGLEHCAMLRPAYAVEYDYLPATQCYPTLMT 378 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 KKI+GLF AGQINGTTGYEEAAAQGLVAGIN+AR++ + I F R SYIG +IDDL + Sbjct: 379 KKIAGLFCAGQINGTTGYEEAAAQGLVAGINAARRAQGQEMIVFPREQSYIGTLIDDLCT 438 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL 477 K + EPYRM TSR+EYR+ LR DNAD RLTP+G ++G I +RR F + + + Sbjct: 439 KDLREPYRMLTSRSEYRLLLRSDNADQRLTPLGREIGLIDDRRWDLFIQKQENIATEKER 498 Query: 478 LKSLVLTSKNLSSTSISFKQDGKTR---TAYEFLSYPDFSIQNLFSICPDARKFSSLVIE 534 L+ L + +I+ + + T + L P F +L + + + Sbjct: 499 LQLTRLKEQEAIGQAIATETGQVIKGSITLADLLRRPGFHYVDLNRYQLGNPRLTEAEQQ 558 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 ++I+ Y+ Y RQ + +I + R +P D +Y+ + LS E +EKL+ +KP + Q Sbjct: 559 GVEIDLKYSGYIQRQQRQIDQIIRQAGRKLPPDLNYAQIGTLSMEAREKLTQVKPLTIGQ 618 Query: 595 ASKIEGMTPAALNLLLIYIK 614 AS+I G+ PA +N LL+Y++ Sbjct: 619 ASRIGGVNPADINALLVYLE 638 >gi|330840115|ref|YP_004414695.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Selenomonas sputigena ATCC 35185] gi|329747879|gb|AEC01236.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Selenomonas sputigena ATCC 35185] Length = 628 Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust. Identities = 274/617 (44%), Positives = 374/617 (60%), Gaps = 4/617 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 I YD+IV+G GHAG EAA AA LG T L T I M CNP+IGG K HLVRE Sbjct: 3 IAGEYDIIVLGAGHAGVEAALAAANLGCRTLLATLSLDNIALMPCNPSIGGPAKSHLVRE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M AD A +Q+R+LN KGPAV R Q D++ Y+ M+ QE L+V Q Sbjct: 63 IDALGGAMAINADEAALQYRLLNTGKGPAVHALRAQEDKKAYQFRMKERCEQQEGLEVRQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 E IV + V+L TGT+L+G I IG+ G G + Sbjct: 123 LLAEKILIEDKEARGIVAETGEAYLARAVILATGTYLKGRIVIGEHTTSGGPNGQRAAGE 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L S + R KTGTPARLD +++ + K + Q DE FSFMT+K T Q+ C Sbjct: 183 LSRSLRENGIKIMRFKTGTPARLDARSLDYRKMQLQPGDEGAQSFSFMTEKRTREQLPCY 242 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN +TH II NI + + +G I+ GPRYCPSIE KI+RF +++ HQ+FLEPEG + Sbjct: 243 LTYTNEKTHEIIRANIDRAPMANGIIEGIGPRYCPSIESKILRFPDKDRHQLFLEPEGWH 302 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ VY G+ST+LP ++Q F+ TIPGLEK I+RPGYAIEYD I+P +L P+L KKI Sbjct: 303 TEEVYVQGMSTSLPVDVQEAFLHTIPGLEKARIMRPGYAIEYDCIDPLQLLPSLMFKKIR 362 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQ NGT+GYEEAAAQGL+AGIN+ SR ++YIGV+IDDL +KG Sbjct: 363 GLFSAGQSNGTSGYEEAAAQGLMAGINAVHYIRGKAPFVLSRAEAYIGVLIDDLVTKGTE 422 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRM TSRAEYR+ LR DNAD RLT G +G + E R ++F K R L++ Sbjct: 423 EPYRMMTSRAEYRLLLRQDNADLRLTEKGRAIGLVKEDRWQKFLKKKNGIIEARKTLENT 482 Query: 482 VL--TSKNLSSTSISFKQDGKTRTAY-EFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 VL + +NL+ + +T T+ +FL P+ L S+ + + V E+L+I Sbjct: 483 VLHPSVENLARLESAGLAPIRTSTSLADFLRRPEMDYAKLASLF-GLERLAPEVEEQLEI 541 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 Y Y +Q + + ++ E R +P D DY+ +P+L +E +EKL+ ++P ++ QAS+I Sbjct: 542 AIRYEGYIKKQQEQVERLEHLESRRLPVDLDYALVPSLRDEAREKLAAVRPLSVGQASRI 601 Query: 599 EGMTPAALNLLLIYIKK 615 G++PA +++LLI++++ Sbjct: 602 SGVSPADISVLLIWLEQ 618 >gi|113955354|ref|YP_731984.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Synechococcus sp. CC9311] gi|123327530|sp|Q0I6D8|MNMG_SYNS3 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|113882705|gb|ABI47663.1| glucose-inhibited division protein A [Synechococcus sp. CC9311] Length = 649 Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust. Identities = 268/610 (43%), Positives = 371/610 (60%), Gaps = 11/610 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAGCEAA AA+LG STAL T I CNPA+GG K LV E+DAL Sbjct: 11 FDVIVVGGGHAGCEAAITAARLGLSTALFTLNLDRIAWQPCNPAVGGPAKSQLVHEVDAL 70 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G++GR+ADA IQ RVLN +GPAV R Q D+ Y M + + NL + + V Sbjct: 71 GGVIGRLADATAIQKRVLNASRGPAVWALRAQTDKRHYSREMLQLLHHTPNLALREAMVT 130 Query: 126 GFNTEKNI-------ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSP 178 G + + I+ + S+ VVLT GTFL G I +G + AGR G+ Sbjct: 131 GLEVDGDPEPAGQARITGVRTYFGSVYGAQAVVLTAGTFLGGRIWVGHQSMSAGRAGEQA 190 Query: 179 SNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSF-MTDKITNRQ 237 + L ++ + F T RLKTGTPAR+D ++I D+ E Q +D FSF T + Q Sbjct: 191 AEGLTDALKQLGFQTDRLKTGTPARVDRRSIALDQLEAQPSDAADRFFSFDPTAWASGEQ 250 Query: 238 IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 + C ITRT TH++I +N+ +AIY G I S GPRYCPSIEDKIVRF +++ HQIFLEP Sbjct: 251 MSCHITRTTAATHQLIKDNLHLTAIYGGIIDSKGPRYCPSIEDKIVRFADKDSHQIFLEP 310 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EG +T +Y G ST LPE IQ + +RT+PGLE+ ++RP Y+++YDY+ +L P+LET Sbjct: 311 EGRDTPEIYVQGFSTGLPETIQLELLRTLPGLEQCVMLRPAYSVDYDYLPATQLKPSLET 370 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 K++ GLF AGQ+NGTTGYEEAAAQGLVAG+N+AR + + F R +SYIG MIDDL S Sbjct: 371 KRVRGLFSAGQLNGTTGYEEAAAQGLVAGLNAARLIGGQEPVHFPRENSYIGTMIDDLVS 430 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL 477 + + EPYR+ TSR+EYR+ LR DNAD RLTP+G +LG I +RR + F +Q + Sbjct: 431 QDLREPYRVLTSRSEYRLVLRGDNADRRLTPLGRELGLIDDRRWQLFNDKLQAMEEEKQR 490 Query: 478 LKSLVLTSKNLSSTSISFKQDGKTR---TAYEFLSYPDFSIQNLFSICPDARKFSSLVIE 534 L+++ L + ++++ + R T + L +L + V E Sbjct: 491 LETVRLKVSDPVASTVEKESGAPIRGSITLADLLRRSGVHSSDLVRHRLADAELPLAVRE 550 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +I+ Y+ Y RQ + ++K + R +P D DY+S+ LS E +EKL+ ++P L Q Sbjct: 551 GAEIDIKYSGYLQRQQQQIDQVKRQSLRKLPADLDYASIGTLSREAREKLTAIQPTTLGQ 610 Query: 595 ASKIEGMTPA 604 A+ I G++ A Sbjct: 611 ATHIPGVSQA 620 >gi|41058556|gb|AAR99259.1| glucose-inhibited division protein A [Candidatus Blochmannia sayi] Length = 592 Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust. Identities = 274/587 (46%), Positives = 369/587 (62%), Gaps = 15/587 (2%) Query: 40 TIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQAD 99 T+G MSCNPAIGG+GKGHLV+EIDA+ G+M R D +GIQFR+LN KG AVR R QAD Sbjct: 1 TLGQMSCNPAIGGIGKGHLVKEIDAMGGMMARAIDKSGIQFRILNSSKGAAVRATRAQAD 60 Query: 100 RELYRLAMQREILSQENLDVIQGEVAGFNTEKN-IISSIVMQDNSMIRCSTVVLTTGTFL 158 + LYR ++ + QE+L VIQ V E I+ +V + R +VVLTTGTFL Sbjct: 61 KMLYRQVIRYNLEHQESLLVIQASVEDLIIENTKIVGVVVPKIGIKFRSLSVVLTTGTFL 120 Query: 159 RGVIHIGKLKIPAGRMGDSPSNSLFNSFMK-FDFDTGRLKTGTPARLDGKTIIWDKTEKQ 217 G IHIG GR GD+ S+SL + +K GRLKTGT R+ K I +D + Q Sbjct: 121 NGKIHIGXNNYSGGRAGDTESSSLLSIRLKELSLRVGRLKTGTSPRVHAKGINFDCLQAQ 180 Query: 218 FADERLIPFSFM-TDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCP 276 +D + FSF+ + K +QI C IT TN +TH I+ N+ S +YSG +K PRYCP Sbjct: 181 ISDNPVPVFSFIGSMKEHPKQIPCYITHTNNQTHDIVKSNLHQSPMYSGLMKGIAPRYCP 240 Query: 277 SIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIR 336 SIEDKI+RF +RN HQIFLEPEGL T +Y NGIST+LP +IQ Q I++I GLE+ I+R Sbjct: 241 SIEDKIIRFSDRNSHQIFLEPEGLTTPEIYLNGISTSLPFDIQIQMIKSIRGLERAYIVR 300 Query: 337 PGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKL 396 PGYAIEYD+ +P++L TLE+K SGLF +GQINGTTGYEEAAAQGL+AGIN+AR S Sbjct: 301 PGYAIEYDFFDPRDLKLTLESKLTSGLFFSGQINGTTGYEEAAAQGLLAGINAARFSQNK 360 Query: 397 DCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCI 456 + R +Y+GV++DDL + G EPYRMFTSRAEYR+SLR DNAD RLT I + G I Sbjct: 361 EGWYPRRDQAYLGVLVDDLCTHGTEEPYRMFTSRAEYRLSLREDNADLRLTSIARRFGLI 420 Query: 457 GERRQKRFAKYIQEYNFLRSLLKSL--------VLTSKNLSSTSISFKQDGKTRTAYEFL 508 + R + F + + R L++ + +L T ++ + +G+ + Sbjct: 421 DDPRWEFFCRKKGDIEKERQRLRNTYIFPNSTDITQLNDLLKTPLTHEINGEELLKRPEI 480 Query: 509 SYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDF 568 +Y S ++F + S V ++++I+ Y Y RQ E + E L+P D Sbjct: 481 NYEKLSRLSVFGLS----TLDSQVSDQIEIQIKYEGYIRRQQEEINRYVYNENVLLPTDI 536 Query: 569 DYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 D++ + LS E+ EKL+ KP ++ QAS+I G+TP A+ LLI++KK Sbjct: 537 DFNIISGLSKEVIEKLNDCKPCSIGQASRISGITPVAIFNLLIWLKK 583 >gi|42526340|ref|NP_971438.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Treponema denticola ATCC 35405] gi|81170588|sp|Q73PH1|MNMG_TREDE RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|41816452|gb|AAS11319.1| glucose inhibited division protein A [Treponema denticola ATCC 35405] Length = 628 Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust. Identities = 265/624 (42%), Positives = 384/624 (61%), Gaps = 18/624 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAG EAA +A++G + LIT + G +SCNP+IGG+ KG++VREIDAL Sbjct: 7 YDVIVVGAGHAGIEAALASARMGEAVLLITQTLDSAGRLSCNPSIGGISKGNIVREIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG--- 122 G MG++ADA+ IQ+R+LN +GPAV+ PR QAD+ LY + I ++NL V Q Sbjct: 67 GGEMGKLADASMIQYRLLNKSRGPAVQAPRVQADKFLYSQLAKHAIELEKNLHVFQDTVI 126 Query: 123 EVAGFNT------EKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGD 176 ++ NT EK + + + VVL TGTF+ G I+IG+ + P GR+G+ Sbjct: 127 DIVSSNTNESGYVEKGSVQYVKTERGREFSAKAVVLATGTFMEGKIYIGEYESPDGRLGE 186 Query: 177 SPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR 236 + L + K F GRLKTGTP R+ ++ TE+Q ADE + PFSF +I Sbjct: 187 RAAIGLGPALAKKGFTVGRLKTGTPMRILRRSFDSSLTEEQEADEIMRPFSFSNAEIHRP 246 Query: 237 QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLE 296 +C IT TN ETH II EN+ +A++SG I G RYCPSIEDKI +F ER+ H +++E Sbjct: 247 YAKCYITHTNQETHDIIRENLHRAALFSGKITGTGARYCPSIEDKIKKFPERDRHHVYIE 306 Query: 297 PEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLE 356 PEGLNT+ +Y NG+S++LPE++Q + IRTIP + V I RP YA++Y Y++P +L L+ Sbjct: 307 PEGLNTEELYINGLSSSLPEDVQDRMIRTIPCFKDVIITRPAYAVDYAYVSPIQLSSDLQ 366 Query: 357 TKKISGLFLAGQINGTTGYEEAAAQGLVAGINSAR-------KSNKLDCICFSRTDSYIG 409 T++I GLFLAGQINGT+GYEEA QG++AGIN+A K K R ++YIG Sbjct: 367 TRRIEGLFLAGQINGTSGYEEAGGQGIIAGINAALFSRSLKFKDEKYVPFVLKRDEAYIG 426 Query: 410 VMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQ 469 VMIDDL ++GV EPYRMFT+RAEYR++LR D AD RLT ++G + R + + Sbjct: 427 VMIDDLVTQGVDEPYRMFTARAEYRLNLRHDTADERLTERAYQIGLQTKEASNRLKEKLL 486 Query: 470 EYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFS 529 + SL K + +T ++ GK+ + L P S++ + +I +++ +S Sbjct: 487 TREKIISLWKDIKITRDLIAKNPELKNHIGKSLA--DALHDPQVSLECICAIDENSKDYS 544 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 + ++E ++E Y Y Q + ++K E IP DFDY ++ LS E + +L ++P Sbjct: 545 AELLESAELEIRYEHYIAVQNRKIAKVKRMENTKIPADFDYDAVSGLSTESRTRLKEVRP 604 Query: 590 FNLLQASKIEGMTPAALNLLLIYI 613 + QAS+I G+ P+ + LL I + Sbjct: 605 ETIGQASRIRGIRPSDIMLLSILL 628 >gi|327403528|ref|YP_004344366.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Fluviicola taffensis DSM 16823] gi|327319036|gb|AEA43528.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Fluviicola taffensis DSM 16823] Length = 623 Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust. Identities = 268/632 (42%), Positives = 388/632 (61%), Gaps = 31/632 (4%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAGCEAA AAKLG+S L+T +TI MSCNPA+GG+ KG +VREID Sbjct: 3 KNYDVIVVGGGHAGCEAANAAAKLGSSVLLVTMNMNTIAQMSCNPAMGGVAKGQIVREID 62 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADR----ELYRLAMQREILSQENLDV 119 AL G G V+D + IQFR+LN+ KGPA+ PRTQ DR E +RL +++ N+D Sbjct: 63 ALGGGSGIVSDLSAIQFRMLNISKGPAMWSPRTQNDRMKFAEEWRLLLEQ----NPNVDF 118 Query: 120 IQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 Q G E + + I +VVLT GTFL G+IH+G+ + GR+G+ S Sbjct: 119 WQDMSNGLIVEGGKVVGVRTSMGLSIYGKSVVLTNGTFLNGLIHLGEKQFGGGRIGEKGS 178 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIE 239 + + F++GR+KTGTP R+DG+++ + K E Q D+ FS+ + Q Sbjct: 179 TGITEDLIALGFESGRMKTGTPPRIDGRSLDYSKMEIQEGDKNPSKFSYGNTEALKIQRP 238 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT T+ TH ++ E S +++G IKS GPRYCPSIEDKI RF +R+ HQ+F+EPEG Sbjct: 239 CHITYTSTLTHDLLREGFDRSPMFNGAIKSSGPRYCPSIEDKINRFADRDRHQLFVEPEG 298 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 T +Y NG ST+LPE++Q + + +I G E + RPGYAIEYDY P +L TLETK Sbjct: 299 WKTVEIYVNGFSTSLPEDVQLRALHSIEGFENAKMFRPGYAIEYDYFPPTQLKHTLETKL 358 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GL+ AGQINGTTGYEEAA QGL+AGIN+A K + + + R+D+YIGV+IDDL +KG Sbjct: 359 IEGLYFAGQINGTTGYEEAACQGLMAGINAALKVQEREPLILGRSDAYIGVLIDDLITKG 418 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYRI LR DNAD RL P+ ++LG + Q+ + ++ N + L+ Sbjct: 419 TQEPYRMFTSRAEYRILLRQDNADIRLVPMAVELGL---QDQEALDRVNRKVNAAKELIG 475 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEF-----LSYPDFSIQNLFSICPDARKFSSLVIE 534 +L + + + G + + ++ P +++++ + R + E Sbjct: 476 ALRKEGVSPEIANPILEGVGSAPLSQQIKLSSVITRPHVTMEHVLEMSEHVRGLA----E 531 Query: 535 RLQIESS-----------YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEK 583 RL +E + Y Y R+ A ++ E +IP DY+S+ +LS E ++K Sbjct: 532 RLHVEHADAVEQAEILLKYEGYIAREEEVALKLSRMETLVIPASIDYNSMKSLSLEARDK 591 Query: 584 LSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 L+ +KP + QAS++ G++P+ +++LLI++ + Sbjct: 592 LTKIKPATIGQASRVSGVSPSDISVLLIHLGR 623 >gi|189501725|ref|YP_001957442.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Candidatus Amoebophilus asiaticus 5a2] gi|189497166|gb|ACE05713.1| hypothetical protein Aasi_0274 [Candidatus Amoebophilus asiaticus 5a2] Length = 621 Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust. Identities = 286/624 (45%), Positives = 380/624 (60%), Gaps = 21/624 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IV+G GHAGCEAAA AA++G+ LIT TI MSCNPA+GG+ KG ++REIDAL Sbjct: 5 YDIIVVGAGHAGCEAAAAAARMGSHVLLITMNMGTIAQMSCNPAMGGIAKGQIIREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADR----ELYRLAMQREILSQENLDVIQ 121 GL G + D + IQFR+LN KGPA+ PR Q+DR E +RLA+++ NLD Q Sbjct: 65 GGLSGIITDKSMIQFRMLNKSKGPAMWSPRAQSDRMRFAEEWRLALEQ----INNLDFWQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E + + IR V+LT GTFL G IHIG+ + GR G+ + Sbjct: 121 DLVKEILIENGRVIGVKTAMGLSIRAKAVILTNGTFLNGAIHIGEKQFKGGRTGEKSATG 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT-NRQIEC 240 L F++GR+KTGTP R+D +T+ + E+Q DE FSF+ I +Q C Sbjct: 181 LTEQLTNLGFESGRMKTGTPPRVDSRTLDYTCMEEQPGDENPSKFSFLDSTIPLTKQRSC 240 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +T TN H ++ + S +++ I+ GPRYCPSIEDKI RF ER HQIF+EPEG Sbjct: 241 HVTYTNKRVHELLEKGFDQSPMFNARIQGKGPRYCPSIEDKITRFAERERHQIFVEPEGW 300 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 NT VY NG S++LPE+IQ+ +R IPG E + RPGYAIEYDY +L TLET+ I Sbjct: 301 NTIEVYVNGFSSSLPEDIQYHALRAIPGFENAKMFRPGYAIEYDYFPATQLNDTLETRLI 360 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 S L+ AGQINGTTGYEEAA QGLVAGIN+ R N+L + FSR+++YIGV+IDDL +K Sbjct: 361 SNLYFAGQINGTTGYEEAACQGLVAGINAHRNINELGKVVFSRSEAYIGVLIDDLITKSS 420 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAE+RI LR DNAD RLT +G K+G E+R K N L LK Sbjct: 421 DEPYRMFTSRAEFRILLRQDNADLRLTELGYKIGLADEKRMSEVQKKQLHINQLIDTLKE 480 Query: 481 LVLTSKNLSSTSISFKQDG-----KTRTAYEFLSYPDFSIQNL----FSICPDARKFSSL 531 L L N ST+ SF + G + +T Y+ L P+ +I L S+ + Sbjct: 481 LKL---NPESTNNSFIESGIVPIRERQTIYQLLKRPELTISILKKYHESLSNALENYGIE 537 Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 VIE+ +I++ Y Y ++ ++ K E I FDY+ + ALS E +EKL KP Sbjct: 538 VIEQAEIQAKYEMYIQKEKELVEKFKRLENCHISPGFDYTQIKALSTEGREKLKKHKPTT 597 Query: 592 LLQASKIEGMTPAALNLLLIYIKK 615 + QASKI G++PA + +L++Y+ + Sbjct: 598 IGQASKISGVSPADIAILMVYMGR 621 >gi|170077730|ref|YP_001734368.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Synechococcus sp. PCC 7002] gi|205831563|sp|B1XJY4|MNMG_SYNP2 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|169885399|gb|ACA99112.1| glucose-inhibited division protein A [Synechococcus sp. PCC 7002] Length = 639 Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust. Identities = 263/617 (42%), Positives = 371/617 (60%), Gaps = 11/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIG GH+GCEAA +A+LG T ++T I CNPA+GG K L E+DAL Sbjct: 12 FDVIVIGAGHSGCEAALASARLGCRTLMLTLNLDKIAWQPCNPAVGGPAKSQLTHEVDAL 71 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE-- 123 G +G++AD +Q RVLN +GPAV R Q D+ Y M+ + +Q+NL + +G Sbjct: 72 GGEIGKMADRTYLQKRVLNASRGPAVWALRAQTDKREYAAVMKNIVENQDNLVIREGMAT 131 Query: 124 --VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V G N E I I + VVLTTGTFL G I IG +PAGR G+ + Sbjct: 132 DLVLGNNDE---ICGIQTYFGTCFGAKAVVLTTGTFLGGTIWIGNKSMPAGRAGEFAAVG 188 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIEC 240 + + + F+TGRLKTGTPAR+D +++ + K E Q ADE + FSF + R Q+ C Sbjct: 189 MTETLNELGFETGRLKTGTPARVDRRSVDYSKMEIQPADEEVRWFSFDPEAWVEREQMPC 248 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +TRT +TH++I +N+ S IY G I S GPRYCPSIEDKIVRF +++ HQIF+EPEG Sbjct: 249 YLTRTTPKTHQLIKDNLHLSPIYGGFIDSKGPRYCPSIEDKIVRFADKDSHQIFIEPEGR 308 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 +Y G ST LPE +Q Q ++++PG+E ++RP YA+EYDY+ + +PTL TK++ Sbjct: 309 TIPELYIQGFSTGLPESLQLQMLQSLPGMEDCVMLRPAYAVEYDYLPATQCYPTLMTKRV 368 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQINGTTGYEEAAAQG+VAGIN+A+ + D + F R SY+G +IDDL +K + Sbjct: 369 EGLFSAGQINGTTGYEEAAAQGIVAGINAAKFAQGQDMVVFPREQSYLGTLIDDLCTKDL 428 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRM TSR+EYR+ LR DNAD RLTP+G ++G IG+RR + + + L + Sbjct: 429 REPYRMLTSRSEYRLILRSDNADQRLTPLGREIGLIGDRRWALYQTKQENIAAEKERLHT 488 Query: 481 LVLTSKNLSSTSISFKQDGKTR---TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 + + I+ K + T + L P F +L S + + Sbjct: 489 ERVKELDPLGQKIAADTGQKIKSSVTLADLLRRPKFHYADLASYGLGNEALTQAEQAGAE 548 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ Y+ Y RQ + +I R +P+ DY ++ LS E +EKL+ ++P + QA++ Sbjct: 549 IDIKYSGYIKRQQNQIDQISRHANRKLPEGLDYLTVETLSMEAREKLNKVRPLTIGQATR 608 Query: 598 IEGMTPAALNLLLIYIK 614 I G+ PA +N LL+Y++ Sbjct: 609 IGGVNPADINALLVYLE 625 >gi|212546287|ref|XP_002153297.1| mitochondrial translation optimization protein (Mto1), putative [Penicillium marneffei ATCC 18224] gi|210064817|gb|EEA18912.1| mitochondrial translation optimization protein (Mto1), putative [Penicillium marneffei ATCC 18224] Length = 683 Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust. Identities = 259/604 (42%), Positives = 370/604 (61%), Gaps = 23/604 (3%) Query: 33 LITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVR 92 L+T IG SCNP+ GG+GKG ++REIDALDG+ GRV D AG+ FRVLN KGPAV Sbjct: 65 LVTPSLDNIGVCSCNPSFGGIGKGTMMREIDALDGVAGRVIDKAGVMFRVLNRSKGPAVW 124 Query: 93 GPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKN----------IISSIVMQDN 142 GPR Q DR+LY+ MQ E+++ +NL +++ +V ++ I + + Sbjct: 125 GPRAQIDRDLYKRYMQEELVATKNLSIVEAKVEDIVVSRDESDQNPHSAGKIVGVRLDSG 184 Query: 143 SMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPA 202 +I S VV+TTGTFL G IHIG P+GRMG++ +++L S + F GRLKTGTP Sbjct: 185 QVIPTSRVVITTGTFLGGEIHIGLEAYPSGRMGEAATHALSKSLRQAGFQLGRLKTGTPP 244 Query: 203 RLDGKTIIWDKTEKQFADERLIPFSFM--TDKITNR-QIECGITRTNLETHRIIMENIKH 259 RLD K+I + E Q D PFSFM T ++++ Q+ C +T TN TH II N+ + Sbjct: 245 RLDKKSIDFSSLEVQRGDSPPNPFSFMNKTTQVSDEGQLTCWMTHTNEATHDIIRANLDN 304 Query: 260 SAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN-TDVVYPNGISTALPEEI 318 S ++ GPRYCPS+E KI+RF + HQI+LEPEG +V+YPNGIS +P E Sbjct: 305 SIHIRETVR--GPRYCPSLEAKILRFKHKKEHQIWLEPEGFAPNEVIYPNGISMTVPVEA 362 Query: 319 QHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEA 378 Q +RTI GLE V +++P Y +EYDYI+P+ L PTLETK I GL+LAGQINGTTGYEEA Sbjct: 363 QEAMLRTIRGLENVRMLQPAYGVEYDYIDPRNLKPTLETKLIGGLYLAGQINGTTGYEEA 422 Query: 379 AAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLR 438 A QG++AG+N+ + + +R D YIG+M+DDL ++GV EPYRMFTSR+E+RIS R Sbjct: 423 AGQGILAGMNAGLAAQGKAPMVLTRADGYIGIMVDDLITRGVSEPYRMFTSRSEFRISSR 482 Query: 439 PDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQD 498 DNAD RLT +G + + + R F++ + + L LL + TS S + D Sbjct: 483 SDNADLRLTAMGREASVVSDERWAHFSETKAQIDELSQLLANTRYTSNQWSRLGFQTRVD 542 Query: 499 GKTRTAYEFLSYPDFSIQNLF-------SICPDARKFSSLVIERLQIESSYAAYTGRQMI 551 R+ + L I +L I + F + +R+ IE+ YA Y RQ + Sbjct: 543 TSYRSGLDMLCVDGIDIDSLIPHITSPSGIAYTSASFDPEIKKRVTIEAQYAPYVKRQSL 602 Query: 552 EAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLI 611 A++ + EE+ L+P + DYS++ LS E ++ L ++P N+ +IEG+TP+ +++ Sbjct: 603 MAEKFRREERMLLPSNMDYSAVHGLSTEERQALERVRPENIGMLRRIEGITPSGAVRIMM 662 Query: 612 YIKK 615 +++K Sbjct: 663 HLRK 666 >gi|195952805|ref|YP_002121095.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Hydrogenobaculum sp. Y04AAS1] gi|195932417|gb|ACG57117.1| glucose inhibited division protein A [Hydrogenobaculum sp. Y04AAS1] Length = 610 Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust. Identities = 270/615 (43%), Positives = 374/615 (60%), Gaps = 18/615 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DV+V+G GHAG EAA A+KL S L T IG MSCNPAIGG+ K +VREID L Sbjct: 3 FDVVVVGAGHAGIEAAIAASKLCDSVGLFTINIDNIGQMSCNPAIGGIAKSIVVREIDIL 62 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + DA GIQF++LN +KG AV PR QAD+ Y+ M++ +++ NL ++Q EV Sbjct: 63 GGEMAKAIDATGIQFKMLNRRKGEAVWAPRAQADKLKYKEYMKKALMNIPNLYLVQDEVI 122 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + N + + + +C VV+TTGTFL G I IG P GR + PS +L Sbjct: 123 DILVKDNEVIGVKTKLGIEYQCKAVVVTTGTFLNGKIFIGDKVFPGGRAWEPPSTTLDEF 182 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-------KITNRQI 238 + +F F R KTGTPARLD +TI +D+ E DE FS +D + +QI Sbjct: 183 YKRFGFTLKRFKTGTPARLDKRTINFDELEPAPGDEPAPKFSLFSDPRGSYWFEPNKKQI 242 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C IT TN +TH II +N+ +A+Y G IK GPRYCPSIEDK+V+F + HQIFLEPE Sbjct: 243 NCYITYTNPKTHEIIRKNLHRTALYGGLIKGVGPRYCPSIEDKVVKFESKAQHQIFLEPE 302 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 G +T +YPNG+ST+LPE+IQ + RTI GLE V +IRP YAIEYD ++P EL+PTLETK Sbjct: 303 GEDTIEIYPNGLSTSLPEDIQQEMYRTIKGLENVVLIRPAYAIEYDIVDPLELYPTLETK 362 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 KI+GLF AG NGTTGYEEAA QG++AGIN+ ++N + I R+ SYIG+M +DL +K Sbjct: 363 KINGLFHAGNFNGTTGYEEAAGQGILAGINAGLRANNKEPIILPRSISYIGLMAEDLATK 422 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 ++EPYR+FTSR+EYR+S+R DNA RL + LG + E K + + N+ Sbjct: 423 EIVEPYRLFTSRSEYRLSVRQDNAPERLLELSHNLGLLNEEDYKLAKELLNGINYYVDYY 482 Query: 479 KSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 KS T I+ ++ K T + ++ I L D + + + + +I Sbjct: 483 KS--------QKTVINLGENPKPYTLSQIIAIE--GIDKLKEFGFDVPQ-NPYIKDETEI 531 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 Y Y ++ +++K E +P D DY ++ L+ E EKL LKP + QA I Sbjct: 532 ILKYEYYIEKEKKLNEKLKMFEHIKLPPDMDYENVKGLTKEAIEKLKKLKPATIAQAKNI 591 Query: 599 EGMTPAALNLLLIYI 613 +G+TPA+++ +LI++ Sbjct: 592 DGITPASISAILIHM 606 >gi|260887477|ref|ZP_05898740.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Selenomonas sputigena ATCC 35185] gi|260862764|gb|EEX77264.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Selenomonas sputigena ATCC 35185] Length = 633 Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust. Identities = 274/617 (44%), Positives = 374/617 (60%), Gaps = 4/617 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 I YD+IV+G GHAG EAA AA LG T L T I M CNP+IGG K HLVRE Sbjct: 8 IAGEYDIIVLGAGHAGVEAALAAANLGCRTLLATLSLDNIALMPCNPSIGGPAKSHLVRE 67 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M AD A +Q+R+LN KGPAV R Q D++ Y+ M+ QE L+V Q Sbjct: 68 IDALGGAMAINADEAALQYRLLNTGKGPAVHALRAQEDKKAYQFRMKERCEQQEGLEVRQ 127 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 E IV + V+L TGT+L+G I IG+ G G + Sbjct: 128 LLAEKILIEDKEARGIVAETGEAYLARAVILATGTYLKGRIVIGEHTTSGGPNGQRAAGE 187 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L S + R KTGTPARLD +++ + K + Q DE FSFMT+K T Q+ C Sbjct: 188 LSRSLRENGIKIMRFKTGTPARLDARSLDYRKMQLQPGDEGAQSFSFMTEKRTREQLPCY 247 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN +TH II NI + + +G I+ GPRYCPSIE KI+RF +++ HQ+FLEPEG + Sbjct: 248 LTYTNEKTHEIIRANIDRAPMANGIIEGIGPRYCPSIESKILRFPDKDRHQLFLEPEGWH 307 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ VY G+ST+LP ++Q F+ TIPGLEK I+RPGYAIEYD I+P +L P+L KKI Sbjct: 308 TEEVYVQGMSTSLPVDVQEAFLHTIPGLEKARIMRPGYAIEYDCIDPLQLLPSLMFKKIR 367 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQ NGT+GYEEAAAQGL+AGIN+ SR ++YIGV+IDDL +KG Sbjct: 368 GLFSAGQSNGTSGYEEAAAQGLMAGINAVHYIRGKAPFVLSRAEAYIGVLIDDLVTKGTE 427 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRM TSRAEYR+ LR DNAD RLT G +G + E R ++F K R L++ Sbjct: 428 EPYRMMTSRAEYRLLLRQDNADLRLTEKGRAIGLVKEDRWQKFLKKKNGIIEARKTLENT 487 Query: 482 VL--TSKNLSSTSISFKQDGKTRTAY-EFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 VL + +NL+ + +T T+ +FL P+ L S+ + + V E+L+I Sbjct: 488 VLHPSVENLARLESAGLAPIRTSTSLADFLRRPEMDYAKLASLF-GLERLAPEVEEQLEI 546 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 Y Y +Q + + ++ E R +P D DY+ +P+L +E +EKL+ ++P ++ QAS+I Sbjct: 547 AIRYEGYIKKQQEQVERLEHLESRRLPVDLDYALVPSLRDEAREKLAAVRPLSVGQASRI 606 Query: 599 EGMTPAALNLLLIYIKK 615 G++PA +++LLI++++ Sbjct: 607 SGVSPADISVLLIWLEQ 623 >gi|116514944|ref|YP_813850.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|122274324|sp|Q047G0|MNMG_LACDB RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|116094259|gb|ABJ59412.1| tRNA uridine 5-carboxymethylaminomethyl modification FAD-utilizing enzyme [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 631 Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust. Identities = 267/622 (42%), Positives = 375/622 (60%), Gaps = 13/622 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 ++ YDVIV+G GHAGCEAA +A++G T L+T + M CNP++GG KG +VRE Sbjct: 5 VSNEYDVIVVGAGHAGCEAALASARMGEKTLLLTISLDMVAFMPCNPSVGGPAKGTVVRE 64 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G MG+ D IQ R+LN KGPAVR R QAD+ Y M+R I + NL + Q Sbjct: 65 IDALGGEMGKNIDKTYIQMRMLNTGKGPAVRALRAQADKWDYHEEMKRTIENTPNLTLRQ 124 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E +V + R +VVLTTGT RG I IG+L +G P+ Sbjct: 125 AVVDDLIVEDGECRGVVTNTGARYRAKSVVLTTGTAARGRIFIGELNYSSGPNNTIPAIK 184 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT---DKITNRQI 238 L S + F R KTGTP R++ TI + KTE++ D+ FSF + D +T+ Q Sbjct: 185 LSESLERLGFKLRRFKTGTPPRVNRHTIDYSKTEEEPGDKEPRHFSFTSRDEDYLTD-QT 243 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C +T TN +TH II EN+ S ++SGDI GPRYCPSIE K+VRF +++ HQIFLEPE Sbjct: 244 SCWMTYTNPKTHEIINENLDRSPMFSGDIVGVGPRYCPSIETKVVRFADKDRHQIFLEPE 303 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 G T+ +Y ST++PEE+Q + + T+ GLEKV ++RPGYAIEYD ++P +L TLETK Sbjct: 304 GRKTEEIYVGDFSTSMPEEVQLEMLHTVAGLEKVEMMRPGYAIEYDVVDPWQLTHTLETK 363 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 +I L+ AGQ+NGT+GYEEAA QGL+AGIN+A + R ++YIGV+IDDL +K Sbjct: 364 RIKHLYTAGQMNGTSGYEEAAGQGLIAGINAALSAEGKPAFTLGRDEAYIGVLIDDLVTK 423 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYR+ TSRAEYR+ LR DNAD RLT G LG I + R+A+++ + ++ L Sbjct: 424 GTEEPYRLLTSRAEYRLLLRHDNADLRLTEKGHDLGLIDD---DRYAEFLAKKELIQEDL 480 Query: 479 KSL-VLTSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLV 532 L +T + + G+T A FL P +++++ + V Sbjct: 481 DRLGEITVHPTIAVNEYLAGLGQTDLNGGVKADVFLRRPRVTVEDVERLTGQKLAGDRYV 540 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 E+++I+ YA Y +Q I+ ++ +E + IPKD DY + L+ E +EKL+ ++P L Sbjct: 541 KEQVEIDIKYAGYIKKQEIQVARLRRQEAKKIPKDIDYDQIEGLATEAREKLAKIRPETL 600 Query: 593 LQASKIEGMTPAALNLLLIYIK 614 QA +I G+ PA L +L +Y++ Sbjct: 601 AQAERISGVNPADLAILSVYVQ 622 >gi|256854959|ref|ZP_05560320.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Enterococcus faecalis T8] gi|307296565|ref|ZP_07576386.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis TX0411] gi|256709472|gb|EEU24519.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Enterococcus faecalis T8] gi|306495992|gb|EFM65579.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis TX0411] gi|315030088|gb|EFT42020.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis TX4000] Length = 632 Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust. Identities = 270/625 (43%), Positives = 383/625 (61%), Gaps = 16/625 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+G GHAG EAA AA++G T L+T + M CNP++GG KG +VREIDA Sbjct: 8 SYDVIVVGAGHAGSEAALAAARMGVKTLLLTINLDMVAFMPCNPSVGGPAKGVVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ R+LN KGPAVR R QAD+ Y M+ I +ENL + QG V Sbjct: 68 LGGEMGKNIDKTYIQMRMLNTGKGPAVRALRAQADKHAYATEMKHTIEKEENLTLRQGIV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + +V + R VV+T GT LRG I IG+LK +G PS L N Sbjct: 128 EELIVEDGVCCGVVTSTGAAYRSQAVVITAGTALRGEIIIGELKYSSGPNNSQPSVGLAN 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNRQIE-CGI 242 + + R KTGTP R+ TI + TE+Q D+ FS+ T D N+ E C + Sbjct: 188 HLKELGLEIDRFKTGTPPRVKSSTIDYSVTEEQPGDKEPNHFSYSTPDSAYNQNQEPCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II +N+ + +++G ++ G RYCPSIEDKIVRF ++ HQ+FLEPEGLNT Sbjct: 248 TYTNETTHEIIQKNLHRAPMFTGIVEGVGARYCPSIEDKIVRFADKPRHQLFLEPEGLNT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q + + +I GLEKV ++R GYAIEYD + P +L PTLETK I Sbjct: 308 EEVYVQGLSTSLPEDVQTEMLHSIEGLEKVEMMRTGYAIEYDVVVPHQLRPTLETKVIEN 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQ NGT+GYEEAA QGL+AGIN+ K + + R+D YIGVMIDDL +KG E Sbjct: 368 LYTAGQTNGTSGYEEAAGQGLMAGINATLKIQGKEPLVLKRSDGYIGVMIDDLVTKGTNE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRS----LL 478 PYR+ TSRAEYR+ LR DNAD RLT +G ++G + +++++A Y+ + + + L Sbjct: 428 PYRLLTSRAEYRLILRHDNADLRLTEMGHEIGLV---KEEQYAAYLVKKAAVEAEIARLG 484 Query: 479 KSLVLTSKN----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARK-FSSLVI 533 K + +K L + + +DG A +FL P+ S Q + P + VI Sbjct: 485 KHRIKPTKEVQAFLETKGAAGLKDGI--LARDFLKRPEISYQEVAQFIPAPEEALDPKVI 542 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I+ Y Y + M + +++K E + IP++ DY ++ L+ E K+KL ++P + Sbjct: 543 EQVEIQIKYEGYIKKAMEKVEKLKRMEAKRIPENIDYQAINGLATEAKQKLQKIQPETIA 602 Query: 594 QASKIEGMTPAALNLLLIYIKKNTV 618 QAS+I G+ PA +++L++YI++ + Sbjct: 603 QASRISGVNPADISILMVYIEQGKI 627 >gi|163814996|ref|ZP_02206383.1| hypothetical protein COPEUT_01149 [Coprococcus eutactus ATCC 27759] gi|158449679|gb|EDP26674.1| hypothetical protein COPEUT_01149 [Coprococcus eutactus ATCC 27759] Length = 630 Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust. Identities = 267/622 (42%), Positives = 377/622 (60%), Gaps = 11/622 (1%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 +++ YDV+++G GHAGCEAA +A+LG +T + T ++ M CNP +GG KGHLVR Sbjct: 3 VLDEEYDVVIVGAGHAGCEAALASARLGLNTIIFTVSMDSVAMMPCNPNVGGSSKGHLVR 62 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G MG+ D IQ ++LN KGPAV R QAD+ Y M+ + + +NL + Sbjct: 63 EIDALGGEMGKNIDKTYIQSKMLNSSKGPAVHSLRAQADKANYSRTMKYTLENTDNLTLR 122 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q EV+ + I+ + + + VVL TGT+L+ G + G G +N Sbjct: 123 QAEVSEILVDDGIVKGVKTYSGATYKAKAVVLCTGTYLKARCIYGDVVYHTGPNGLMAAN 182 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK--ITNRQI 238 L +S R KTGTPARLD +TI + + E+Q DE+++PFSF + I QI Sbjct: 183 HLSDSMKNAGISIRRFKTGTPARLDKRTIDFSQMEEQKGDEKIVPFSFTNTESDIKREQI 242 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C + TN +TH II NI+ S ++SG I+ GPRYCPSIEDK+ +F +++ HQIF+EPE Sbjct: 243 SCWLCYTNEKTHEIIRNNIERSPLFSGVIEGTGPRYCPSIEDKVTKFPDKSRHQIFIEPE 302 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 G T+ +Y G+S++LPE++Q+ I ++ GLE IIR YAIEYD IN L P+LE K Sbjct: 303 GEFTNEMYMGGMSSSLPEDVQYDMIHSMKGLENAKIIRNAYAIEYDCINAINLKPSLEFK 362 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 ISGLF AGQING++GYEEAAAQGL+AGIN+ARK + R+ +YIGV+IDDL +K Sbjct: 363 TISGLFGAGQINGSSGYEEAAAQGLMAGINAARKVQGKTPVVLDRSQAYIGVLIDDLVTK 422 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 EPYRM TSRAEYR+ LR DNAD RLT IG +G I + +R++K+I + + + Sbjct: 423 ETSEPYRMMTSRAEYRLLLRQDNADIRLTDIGHDIGLIDD---ERYSKFILKKKQIEKEI 479 Query: 479 KSLVLTSKNLSSTSISF---KQDGKTRTA---YEFLSYPDFSIQNLFSICPDARKFSSLV 532 L T ++T F K +TA E + P+ S +++ I K V Sbjct: 480 YRLENTMVGANATIQKFLEKKNSTGLKTAASLAELIRRPELSYEDIEEIDEGREKLPDDV 539 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 IE++ I Y Y RQ + + K E R +P D DY + L E ++KLS ++P N+ Sbjct: 540 IEQINITIKYKGYIDRQNQQVHQFKKLESRRLPDDIDYEQIKNLRLEARQKLSKIRPENI 599 Query: 593 LQASKIEGMTPAALNLLLIYIK 614 QAS+I G++PA +++LL+Y+K Sbjct: 600 GQASRISGVSPADISVLLVYMK 621 >gi|326509425|dbj|BAJ91629.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 716 Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust. Identities = 263/620 (42%), Positives = 378/620 (60%), Gaps = 10/620 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + YDVIV+GGGHAGCEAA +A+LGA T L+T I CNPA+GG K LV E Sbjct: 56 LRERYDVIVVGGGHAGCEAALASARLGARTLLLTLNIDRIAWQPCNPAVGGPAKSQLVHE 115 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENL---D 118 +DAL G +G++AD +Q RVLN KGPAVR R Q D+ Y + M++ + S +NL + Sbjct: 116 VDALGGDIGKIADRCYLQKRVLNSSKGPAVRALRAQTDKREYAMEMRKVVESTQNLFIRE 175 Query: 119 VIQGEVA-GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 + EV G N + + D +VVLTTGTF+ G I +G+ +PAGR G+S Sbjct: 176 AMATEVMIGKNDSVEGVRTFFGMD---FYAPSVVLTTGTFMSGKIWVGRTSMPAGRAGES 232 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR- 236 S+ L + + F+T RLKTGTP R+D +T+ + + E Q DE + FSF + T R Sbjct: 233 ASHGLTENLQQLGFETDRLKTGTPPRIDRRTVDFSRLEAQHGDEEVGWFSFDPEFHTERE 292 Query: 237 QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLE 296 Q+ C +TRT ETH+I+ +N+ + Y G +++ GPRYCP+IEDKIVRF ++ HQ+FLE Sbjct: 293 QMCCYLTRTTKETHQIVTDNLDETPTYGGWVEAKGPRYCPAIEDKIVRFKDKESHQVFLE 352 Query: 297 PEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLE 356 PEG + +Y G ST LPE +Q +RT+PGLE ++RP YA+EYDY+ + +L Sbjct: 353 PEGRDVPELYLQGFSTGLPERLQLPLVRTLPGLENCVMLRPAYAVEYDYLPAYQCSRSLM 412 Query: 357 TKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 TK+ GLF +GQINGTTGYEEAAAQG+V+GIN+AR S+ I R SYIG +IDDL Sbjct: 413 TKRFEGLFFSGQINGTTGYEEAAAQGIVSGINAARHSDGKPLIVLERESSYIGTLIDDLV 472 Query: 417 SKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRS 476 +K + EPYRM TSR+E+R+ R DNAD+RLTP G ++G I +RR + + + Sbjct: 473 TKDLREPYRMLTSRSEHRLLFRSDNADSRLTPFGREIGLIDDRRWELYKSKQARIKEEKE 532 Query: 477 LLKSLVLTSKNLSS--TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIE 534 LK ++ ++ T++S + ++ T L P + L S + + Sbjct: 533 RLKHTRVSGVEFAAEVTAVSNQPVKESSTLEAILKKPHVQYKLLDKHGYGNEHLSPIEKD 592 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 ++I+ Y + RQ + ++I +E R +P+D DY S+ LS E +EKLS ++P L Q Sbjct: 593 CVEIDIKYEGFIARQQSQLQQIINQEHRKLPEDLDYHSMLNLSLEAREKLSKVRPQTLGQ 652 Query: 595 ASKIEGMTPAALNLLLIYIK 614 A +I G++PA + +LLI ++ Sbjct: 653 AGRIGGVSPADMTVLLISME 672 >gi|222824097|ref|YP_002575671.1| glucose inhibited division protein A [Campylobacter lari RM2100] gi|222539319|gb|ACM64420.1| glucose inhibited division protein A [Campylobacter lari RM2100] Length = 617 Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust. Identities = 272/612 (44%), Positives = 367/612 (59%), Gaps = 3/612 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EA+A AA++G T L+T IG+ SCNPAIGGL KGHLV+EIDA+ Sbjct: 2 FDVIVIGGGHAGIEASAAAARMGKKTLLLTTLVEQIGAASCNPAIGGLAKGHLVKEIDAM 61 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLMG++ D AGIQFR+LN KG AVRG R Q D + YR+ + ++L +NL++ Q +V Sbjct: 62 GGLMGQITDEAGIQFRILNESKGVAVRGSRAQIDMDAYRICARNKLLKLQNLEISQEQVL 121 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + + ++LTTGTFL G+IHIG+ K+ AGR+G+ S SL Sbjct: 122 SLIIENDEVKGVKTNLENTYFAKKIILTTGTFLNGLIHIGEKKLQAGRVGELASVSLGEY 181 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + GRLKTGT R+D K+I + E Q DE PFSF T T Q+ C I RT Sbjct: 182 LKQSGLKIGRLKTGTCPRVDAKSIDFSVLEIQNGDENPKPFSFKTKNFTPNQLPCYIART 241 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 NL+TH II +N + +++G I+ GPRYCPSIEDKI RF ++ H +F+EP+ + Sbjct: 242 NLKTHEIIKDNFYRAPLFTGQIEGIGPRYCPSIEDKINRFSDKESHHLFIEPQTKDATEY 301 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG ST+LP E+Q +R+I G E I R GYAIEYDYI+P EL TLETKKI L+ Sbjct: 302 YINGFSTSLPYEVQIAMLRSIKGFENAKITRFGYAIEYDYIDPTELRHTLETKKIKNLYC 361 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAAAQG +AGIN+ D R ++YIGV+IDDL KG EPYR Sbjct: 362 AGQINGTTGYEEAAAQGFMAGINAVLSIENKDPFILGRDEAYIGVLIDDLVLKGTKEPYR 421 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAEYR+ LR +NA RL G + + Q + L T Sbjct: 422 MFTSRAEYRLLLREENAILRLGEYGYNFKLLSDDDFAYINNIKQNVSKGLDFLLQTTWTP 481 Query: 486 KNLSSTSI-SFKQDGKTR--TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSY 542 N ++ + S K++ T + ++ F+++ L ++ + + E+ Y Sbjct: 482 NNKNNEFLQSIKEEKITSIINLQKIVARASFNVEKLKALDKIFENMDEYSLNEILSEAKY 541 Query: 543 AAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMT 602 Y Q + +++K IP++FD+ S+ LSNE+ EKL P + AS+I G+T Sbjct: 542 YHYIAMQKAQIEKMKNLSDLKIPENFDFKSVSGLSNEVVEKLQKFNPPTIFAASQISGIT 601 Query: 603 PAALNLLLIYIK 614 PAAL++L IYIK Sbjct: 602 PAALDILHIYIK 613 >gi|300811990|ref|ZP_07092446.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497016|gb|EFK32082.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|325685112|gb|EGD27243.1| glucose inhibited division protein A [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 631 Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust. Identities = 267/622 (42%), Positives = 375/622 (60%), Gaps = 13/622 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 ++ YDVIV+G GHAGCEAA +A++G T L+T + M CNP++GG KG +VRE Sbjct: 5 VSNEYDVIVVGAGHAGCEAALASARMGEKTLLLTIGLDMVAFMPCNPSVGGPAKGTVVRE 64 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G MG+ D IQ R+LN KGPAVR R QAD+ Y M+R I + NL + Q Sbjct: 65 IDALGGEMGKNIDKTYIQMRMLNTGKGPAVRALRAQADKWDYHEEMKRTIENTPNLTLRQ 124 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E +V + R +VVLTTGT RG I IG+L +G P+ Sbjct: 125 AVVDDLIVEDGECRGVVTNTGARYRAKSVVLTTGTAARGRIFIGELNYSSGPNNTIPAIK 184 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT---DKITNRQI 238 L S + F R KTGTP R++ TI + KTE++ D+ FSF + D +T+ Q Sbjct: 185 LSESLERLGFKLRRFKTGTPPRVNRHTIDYSKTEEEPGDKEPRHFSFTSRDEDYLTD-QT 243 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C +T TN +TH II EN+ S ++SGDI GPRYCPSIE K+VRF +++ HQIFLEPE Sbjct: 244 SCWMTYTNPKTHEIINENLDRSPMFSGDIVGVGPRYCPSIETKVVRFADKDRHQIFLEPE 303 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 G T+ +Y ST++PEE+Q + + T+ GLEKV ++RPGYAIEYD ++P +L TLETK Sbjct: 304 GRKTEEIYVGDFSTSMPEEVQLEMLHTVAGLEKVEMMRPGYAIEYDVVDPWQLTHTLETK 363 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 +I L++AGQ+NGT+GYEEAA QGL+AGIN+A + R ++YIGV+IDDL +K Sbjct: 364 RIKHLYMAGQMNGTSGYEEAAGQGLIAGINAALSAEGKPAFTLGRDEAYIGVLIDDLVTK 423 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYR+ TSRAEYR+ LR DNAD RLT G LG I + R+A+++ + ++ L Sbjct: 424 GTEEPYRLLTSRAEYRLLLRHDNADLRLTEKGHDLGLIDD---DRYAEFLVKKELIQEDL 480 Query: 479 KSL-VLTSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLV 532 L +T + + G+T A FL P +++++ + V Sbjct: 481 DRLHEITVHPTIAVNEYLAGLGQTDLNGGVKADVFLRRPRVTVEDVERLTGQKLAGDRYV 540 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 E+++I+ YA Y +Q I+ ++ +E + IPKD DY + L+ E +EK + ++P L Sbjct: 541 KEQVEIDIKYAGYIKKQEIQVARLRRQEAKKIPKDIDYDQIEGLATEAREKFAKIRPETL 600 Query: 593 LQASKIEGMTPAALNLLLIYIK 614 QA +I G+ PA L +L +YI+ Sbjct: 601 AQAERISGVNPADLAILSVYIQ 622 >gi|227529883|ref|ZP_03959932.1| glucose-inhibited division protein A [Lactobacillus vaginalis ATCC 49540] gi|227350187|gb|EEJ40478.1| glucose-inhibited division protein A [Lactobacillus vaginalis ATCC 49540] Length = 632 Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust. Identities = 266/620 (42%), Positives = 372/620 (60%), Gaps = 9/620 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAG EAA AA++G T L+T + M CNP++GG KG +VREIDA Sbjct: 13 NYDVIVVGAGHAGSEAALAAARMGNKTLLVTINLDMVAFMPCNPSVGGPAKGIVVREIDA 72 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG D +Q R+LN KGPAVR R QAD+ Y +M+ I Q NLD+ Q V Sbjct: 73 LGGEMGHNIDKTYVQMRMLNTGKGPAVRALRAQADKHAYHRSMKETIEKQPNLDLRQATV 132 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ + TVVLT GT RG I IG+L+ +G + L Sbjct: 133 DQLIVEDGVCKGVITNTGARYHAKTVVLTVGTAARGKIIIGELQYESGPNNSKSAVKLSE 192 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT----NRQIEC 240 + + FD R KTGTP R++G TI +++TE+Q D+ + FSF T + QI C Sbjct: 193 NLEELGFDLERFKTGTPPRINGNTIHYNETEEQPGDKEVHHFSFDTPDDHYLPLSEQISC 252 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +T TN TH +I +N+ + ++SG IK GPRYCPSIEDK+VRF +++ HQIFLEPEG Sbjct: 253 WLTYTNPGTHELIRDNLDRAPMFSGVIKGVGPRYCPSIEDKVVRFADKSRHQIFLEPEGR 312 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 +TD Y +G+ST++PEEIQ + + ++ GLE ++RPGYAIEYD + P +L PTLETK + Sbjct: 313 DTDEWYVDGLSTSMPEEIQQKILHSVKGLEDAQLMRPGYAIEYDVVAPYQLHPTLETKLV 372 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 L+ AGQ NGT+GYEEAA QGL+AGIN+ ++ R+D+YIGVMIDDL +KG Sbjct: 373 KNLYTAGQTNGTSGYEEAAGQGLIAGINAGLRALGKKPFVLKRSDAYIGVMIDDLVTKGT 432 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYR+ TSRAEYR+ LR DNAD RL G ++G + + R + K ++ + LKS Sbjct: 433 KEPYRLLTSRAEYRLILRHDNADFRLMGKGHEIGLVSDERYAKMEKKEKQVQDEIARLKS 492 Query: 481 LVLTSKNLSSTS-ISFKQDGKTR---TAYEFLSYPDFSIQNLFSICP-DARKFSSLVIER 535 L N I D + + TA +F+ P + + L P A + VIE+ Sbjct: 493 EKLKPNNDEVNQFIEAHGDNRLKDAITAADFIKRPYVNYETLMKFIPAPAEELDRQVIEQ 552 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ YA Y ++ + +K E + IP + DY + L+ E ++KL ++P L QA Sbjct: 553 VEIQLKYAGYIKKEEEKVARLKRMEAKRIPANIDYEKVDGLATEGRQKLEKIRPETLAQA 612 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G+ PA L +L +YI+K Sbjct: 613 SRISGVNPADLAILSVYIRK 632 >gi|194476846|ref|YP_002049025.1| glucose-inhibited division protein A [Paulinella chromatophora] gi|171191853|gb|ACB42815.1| glucose-inhibited division protein A [Paulinella chromatophora] Length = 638 Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust. Identities = 266/622 (42%), Positives = 383/622 (61%), Gaps = 16/622 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++++IV+GGGHAGCEAA AA+LG STAL + IG CNPA+GG K LV E+DA Sbjct: 10 TFELIVVGGGHAGCEAAIAAARLGISTALFSLNLDRIGWQPCNPAVGGPAKSQLVHEVDA 69 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G++G++ADA +Q RVLN +GPAV R Q D+ Y M + + + NL + + V Sbjct: 70 LGGIIGKLADATALQKRVLNSSRGPAVWALRAQTDKRQYACQMLQTLQNTPNLALREAMV 129 Query: 125 AGF------NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSP 178 NT N++ + S+ ++LTTGTFL G I +GK +PAGR G++P Sbjct: 130 TSIETVNSSNTGINVVCGVRTYFGSLYAGKAIILTTGTFLGGQIWVGKQSMPAGRAGEAP 189 Query: 179 SNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQ 237 + L + F RLKTGTPAR+D ++I E Q ++ FSF I+++Q Sbjct: 190 AEGLTENLRNLGFIIERLKTGTPARVDRRSISIHALEAQPSNASNRFFSFDPSLWISSKQ 249 Query: 238 IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 + C +TRT TH++I +N+ + IY G I+S GPRYCPSIEDK+VRF ++ HQIFLEP Sbjct: 250 MNCYMTRTTSSTHKLIRQNLHLTPIYGGSIESKGPRYCPSIEDKVVRFADKESHQIFLEP 309 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EG +T +Y G ST LPE +Q +RT+PGLE +++P YA++YDY+ +L TLET Sbjct: 310 EGRDTPELYIQGFSTGLPERLQLALLRTLPGLENCVMLKPAYAVDYDYLPATQLKSTLET 369 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 K ++GLF AGQINGTTGYEEAAAQGLVAG+N++R + I F+R +SYIG +IDDL Sbjct: 370 KHVAGLFCAGQINGTTGYEEAAAQGLVAGLNASRFISGEKTITFARENSYIGTLIDDLVK 429 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL 477 + + EPYR+ TSR+EYR++LR DNAD RLTP+G ++G I +RR + + +Q ++ Sbjct: 430 QNLREPYRVLTSRSEYRLTLRGDNADRRLTPLGYEIGLIDKRRWELYQHKLQAIENEKNR 489 Query: 478 LKSLVLTSKN------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL 531 L+ + L + +S T +S K + T E L P +L + Sbjct: 490 LEKVRLKVTDFANSVIVSETGVSIK---GSITLAELLRRPGMHAIDLVRHGLMSDNLRKD 546 Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 V E ++I++ Y Y RQ + ++K +E + IP D +Y S+ LS E +E LS +KP N Sbjct: 547 VRESVEIDTKYRGYLSRQQQQIDQVKKQEHKPIPMDTNYLSIHTLSKEARENLSKIKPTN 606 Query: 592 LLQASKIEGMTPAALNLLLIYI 613 L QA++I G++ A + L+I++ Sbjct: 607 LGQAARIPGVSQADMTALIIWL 628 >gi|317054821|ref|YP_004103288.1| glucose inhibited division protein A [Ruminococcus albus 7] gi|315447090|gb|ADU20654.1| glucose inhibited division protein A [Ruminococcus albus 7] Length = 620 Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust. Identities = 261/615 (42%), Positives = 372/615 (60%), Gaps = 5/615 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++D+IVIG GHAGCEAA A+LG TAL T + +M CNP+IGG KGHLVREIDA Sbjct: 3 NFDIIVIGAGHAGCEAALAGARLGLKTALFTITLDAVANMPCNPSIGGTAKGHLVREIDA 62 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR AD IQ R+LN KGPAV R Q DR Y M++ I E L + Q E+ Sbjct: 63 LGGEMGRAADKTLIQSRMLNRGKGPAVHSLRAQIDRMAYHNLMKKTIEDTEGLYLKQAEI 122 Query: 125 AG--FNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 F + + + C V++ +GT+L G IH+G +G P+ L Sbjct: 123 TDVLFEDDGKTVRGVRTHLGVEYGCRAVIIASGTYLNGEIHVGTTTYASGPDSVLPARRL 182 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGI 242 +S + R KTGTPAR+ ++I +DK E Q DE + PFSF + +++C + Sbjct: 183 SDSLKEAGMTLRRFKTGTPARVHKRSIDFDKLEVQHGDEDIQPFSFTNEVPPENKVDCYV 242 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 TN ETH++IM+NI S IYSG I + GPRYCPSIEDKI+RF ++ HQ+F+EP GL+T Sbjct: 243 AYTNAETHKVIMDNIHLSPIYSGRIHAIGPRYCPSIEDKIMRFSDKPRHQLFIEPMGLDT 302 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + Y G+S++LP ++Q +F+RTI GLE V I+R YAIEYD +P +L PTLE K+ G Sbjct: 303 EEYYLQGMSSSLPVDVQLKFLRTIKGLENVEIMRNAYAIEYDCCDPNDLLPTLEFKEFHG 362 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 ++ AGQ NGT+GYEEAAAQGLVAGIN+A K + + R SYIG ++DDL +KGV + Sbjct: 363 IYGAGQFNGTSGYEEAAAQGLVAGINAALKLKGEEPMVLDRASSYIGTLVDDLCTKGVSD 422 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL- 481 PYRM TSR+EYR+ LR DNAD RLT G ++G I + R F K ++ + ++ Sbjct: 423 PYRMLTSRSEYRLLLRQDNADLRLTETGHRVGLISDERYAAFTKKKEQIEAEVKRVSAIN 482 Query: 482 VLTSKNLSSTSISFKQD--GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + S+ L+ +S D + + P + + L I P+ + V E++++ Sbjct: 483 IAPSEELNEYLVSQGTDPINNGIKLTQLIRRPQLTYKGLAFIDPERPELPDDVCEQVELT 542 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y Q+ + ++ E + IP++ DYS + +L E EKL+ ++P ++ QAS+I Sbjct: 543 IKYEGYIKIQLEQVAAMRKLENKKIPENIDYSKVGSLRLEAAEKLAKIRPLSVGQASRIS 602 Query: 600 GMTPAALNLLLIYIK 614 G+ PA +N+LL+Y++ Sbjct: 603 GVNPADINVLLVYLE 617 >gi|295101870|emb|CBK99415.1| glucose-inhibited division protein A [Faecalibacterium prausnitzii L2-6] Length = 623 Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust. Identities = 272/615 (44%), Positives = 367/615 (59%), Gaps = 10/615 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAG EAA AA LGA TA+ T IG+M CNP+IGG KG LVRE+DAL Sbjct: 7 YDVIVIGAGHAGIEAAHAAAMLGAKTAVFTMSLDAIGNMPCNPSIGGTAKGTLVRELDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+MG ADA +Q R+LN KGPAV R Q DR+ Y M+ + L + Q E+ Sbjct: 67 GGVMGLAADATYLQSRMLNKGKGPAVHALRVQTDRKRYHEYMKHALELTPGLAIHQAEII 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + +V Q N VV+ TGT L G I +G +G G +N+L S Sbjct: 127 SIEVEDGHVKGVVTQLNGEYGAKCVVIATGTNLGGKIFVGDAWYASGPDGMHAANALTES 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFAD--ERLIPFSFMTDKITNRQIECGIT 243 R KTGTPAR+ ++I + K E Q D L PFSFMTD + ++EC I Sbjct: 187 LKAAGLPLRRFKTGTPARVHRRSIDFSKLECQPGDPNNELQPFSFMTDAPMHNKVECWIA 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN ETHRII++NI+ S +Y G I+ GPRYCPSIEDK+VRF ++ H IF+EP G NT+ Sbjct: 247 YTNPETHRIILDNIQRSPLYGGMIEGVGPRYCPSIEDKVVRFAGKDRHPIFVEPCGENTE 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G S++LPE++Q+ F R+I G E + I+RP YAIEYD ++P L TLE+K + GL Sbjct: 307 EMYLQGASSSLPEDVQNAFYRSIKGFENIEIMRPAYAIEYDCVDPTSLEATLESKVVRGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQ NGT+GYEEAAAQGL+AG+N+AR + + R SY+G ++DDL +KGV++P Sbjct: 367 YGAGQFNGTSGYEEAAAQGLLAGLNAARNALGESQLILPRQSSYLGTLVDDLVTKGVMDP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFL---RSLLKS 480 YRM TSR+EYR++LR DNAD RLTPIG + G + + R+ KY Q L R L Sbjct: 427 YRMMTSRSEYRLTLRQDNADTRLTPIGREYGLV---QDDRWTKYQQTQAVLDAERRRLHD 483 Query: 481 LVLTSKNLSST--SISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 L + +L + + + A E L P+ + + + ++ ERL+ Sbjct: 484 AHLRTADLRAAMEAAGLAPAAEGGIAEELLRRPEIDYPLIAGMIGWGEGITPMLAERLET 543 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E YA Y RQ E+ EK LIP+DF Y+ L L+ E +EKL+ ++P NL QA +I Sbjct: 544 EIKYAGYIARQDRMIHEVARHEKTLIPEDFSYTELTGLTLEAREKLARIRPKNLGQAGRI 603 Query: 599 EGMTPAALNLLLIYI 613 G++P+ + L I + Sbjct: 604 PGVSPSDVAQLSIAL 618 >gi|212697395|ref|ZP_03305523.1| hypothetical protein ANHYDRO_01965 [Anaerococcus hydrogenalis DSM 7454] gi|212675587|gb|EEB35194.1| hypothetical protein ANHYDRO_01965 [Anaerococcus hydrogenalis DSM 7454] Length = 633 Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust. Identities = 268/619 (43%), Positives = 373/619 (60%), Gaps = 6/619 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 I+ SYD++VIG GHAGCEAA +A+LG T ++T ++ M CNP IGG GKGH+VRE Sbjct: 9 IDESYDIVVIGAGHAGCEAALSSARLGFKTLVLTTSMESVADMPCNPNIGGTGKGHIVRE 68 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M D IQ R+LN KGPAV R QAD+ Y M++ + +QENLD+ + Sbjct: 69 IDALGGEMAINIDKTFIQSRMLNTSKGPAVHSLRVQADKIKYHQEMKKTLENQENLDLFE 128 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 EV N E + SI ++ V+ TGT+L G I +G + +G G S + Sbjct: 129 QEVDKINVEDGKVKSIETVQGAIFPTKACVVCTGTYLNGKILMGDFQKTSGPHGLSAATH 188 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT---DKITNRQI 238 L +S + F R KTGTPAR+D K++ KTE Q DE ++ FSF+ D +Q Sbjct: 189 LSDSLEELGFSLRRFKTGTPARVDRKSLDLTKTEIQKGDENIVAFSFLNEGKDFSDKKQE 248 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C +T T +T IIMEN++ S +Y G +K GPRYCPSIEDK+VRF +R+ HQ+F+EPE Sbjct: 249 ACYLTYTTEKTKEIIMENLERSPMYGGLVKGIGPRYCPSIEDKMVRFPDRDIHQVFIEPE 308 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 L+TD +Y G+S+ LP+E+Q +F +TI GLE IIRP Y IEYD ++ L +LE+K Sbjct: 309 SLSTDEMYVQGVSSTLPQEVQKEFYKTIEGLEDCKIIRPAYGIEYDCLDSTNLKRSLESK 368 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 +I LF AGQING++GYEEAA QGLVAGIN+A K D + R+D+YIGV+IDDL +K Sbjct: 369 EIENLFFAGQINGSSGYEEAAGQGLVAGINAALKLRGDDPLILDRSDAYIGVLIDDLVTK 428 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCI-GERRQKRFAKYIQEYNFLRSL 477 G EPYRM TSR EYR+++R DNAD RLT ++G + ER QK K ++ L Sbjct: 429 GTNEPYRMMTSRCEYRLTMRQDNADLRLTEKAHEIGLVTDERYQKMIEKRKNIEGEIKRL 488 Query: 478 LKSLVLTSK--NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIER 535 K +V S+ N I + ++ + P+ + + L + D + Sbjct: 489 QKIMVGPSQENNKIMEEIGSSPLKTGYSLFDLIKRPELTYEKLEILDRDRPTLPKFQQIQ 548 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 +Q E Y Y +QM + + K E + + D DY+ + L E EKL+ +KP ++ QA Sbjct: 549 VQTEIKYQGYIKKQMADIGKFKKLENKKLDHDTDYTKIKGLKKESAEKLNKIKPDSIGQA 608 Query: 596 SKIEGMTPAALNLLLIYIK 614 S+I G++PA +N+LLI +K Sbjct: 609 SRISGVSPADINVLLIRLK 627 >gi|322391190|ref|ZP_08064662.1| glucose inhibited division protein A [Streptococcus peroris ATCC 700780] gi|321145943|gb|EFX41332.1| glucose inhibited division protein A [Streptococcus peroris ATCC 700780] Length = 638 Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust. Identities = 258/615 (41%), Positives = 372/615 (60%), Gaps = 6/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DAL Sbjct: 9 YDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + D IQ ++LN KGPAVR R QAD+ELY M++ + +QENL Q + Sbjct: 69 GGEMAKNIDKTYIQMKMLNTGKGPAVRALRAQADKELYSKEMRKTVENQENLTFRQTMID 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + V++TTGT LRG I IG LK +G S +L ++ Sbjct: 129 EILVEDGKVFGVRTATHQEYGAKAVIVTTGTALRGEIIIGDLKYSSGPNHSLASVNLADN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 + + GR KTGTP R+ +I +D+TE Q DE FS+ + + Q+ C +T Sbjct: 189 LKELGLEIGRFKTGTPPRVKASSINYDETEIQPGDETPNHFSYTSRDEDYLKDQVPCWLT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +H II N+ + +++G +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG +T+ Sbjct: 249 YTNGHSHEIIQNNLYRAPMFTGVVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRDTE 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE++Q + +I GLE ++R GYAIEYD + P +L TLETKKISGL Sbjct: 309 EVYVQGLSTSLPEDVQRDLVHSIKGLENAEMMRTGYAIEYDMVLPHQLRATLETKKISGL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMIDDL +KG +EP Sbjct: 369 FTAGQTNGTSGYEEAAGQGIIAGINAALKIQGKPELILKRSDGYIGVMIDDLVTKGTVEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G ++G + + R RF ++ L+S+ L Sbjct: 429 YRLLTSRAEYRLILRHDNADMRLTEMGREIGLVDDERWTRFEIKKNQFENEMKRLESIKL 488 Query: 484 ---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQIE 539 N ++ FK TA EFL P+ S Q++ + I P A +IE ++ E Sbjct: 489 KPVKETNEKVAAMGFKPLTDAVTAKEFLRRPEVSYQDVVAFIGPAAEDLDDKIIELIETE 548 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + M + ++K E++ IP + D+ + +++ E ++K ++ P + QAS+I Sbjct: 549 IKYEGYISKAMDQVAKMKRMEEKRIPANIDWDDIDSIATEARQKFKLINPETIGQASRIS 608 Query: 600 GMTPAALNLLLIYIK 614 G+ PA +++L++Y++ Sbjct: 609 GVNPADISILMVYLE 623 >gi|319940178|ref|ZP_08014531.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Streptococcus anginosus 1_2_62CV] gi|319810649|gb|EFW06979.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Streptococcus anginosus 1_2_62CV] Length = 638 Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust. Identities = 259/616 (42%), Positives = 370/616 (60%), Gaps = 6/616 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYD++VIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DA Sbjct: 8 SYDIVVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M + D IQ ++LN KGPAVR R QAD+ELY M++ + QENL + Q + Sbjct: 68 LGGEMAKNIDKTYIQMKMLNTGKGPAVRALRAQADKELYSKEMRKTVQHQENLTLRQTII 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + + VV+TTGT LRG I IG LK +G + +L + Sbjct: 128 DEILVENGKVVGVKTATHQEFATKAVVVTTGTALRGEIIIGDLKYSSGPNHSLAAINLAD 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGI 242 + F+ GR KTGTP R+ +I +++T+ Q DE+ FS+ + + QI C + Sbjct: 188 NLRDLGFEIGRFKTGTPPRVKASSINYEETDIQPGDEKANHFSYTSHDEDYLKEQIPCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +H II N+ + ++SG +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG +T Sbjct: 248 TYTNGRSHEIIQNNLYRAPMFSGMVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRDT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q + +I GLE ++R GYAIEYD I P +L TLETKKISG Sbjct: 308 EEVYIQGLSTSLPEDVQKDLVHSIKGLENAELMRTGYAIEYDMIMPHQLRATLETKKISG 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQ NGT+GYEEAA QG+VAGIN+A K + R+D YIGVMIDDL +KG +E Sbjct: 368 LFTAGQTNGTSGYEEAAGQGIVAGINAALKVQGKPELILKRSDGYIGVMIDDLVTKGTVE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYR+ TSRAEYR+ LR DNAD RLT IG ++G + + R RF +Y L ++ Sbjct: 428 PYRLLTSRAEYRLILRHDNADMRLTEIGRRVGLVDDERWLRFEIRKNQYETEMKRLSTIK 487 Query: 483 L---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQI 538 L N + FK TA EFL P+ S Q++ + A +IE ++ Sbjct: 488 LKPIKETNEMVEKLGFKPLTDAVTAKEFLRRPEVSYQDVVKFVGSAAEDLDEKIIELIET 547 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E Y Y + + + +++K E++ IP + D+ + +++ E ++K + P + QAS+I Sbjct: 548 EVKYEGYISKALDQVEKMKRMEEKRIPANIDWDDIDSIATEARQKFKKINPETIGQASRI 607 Query: 599 EGMTPAALNLLLIYIK 614 G+ PA +++L++Y++ Sbjct: 608 SGVNPADISILMVYLE 623 >gi|227498805|ref|ZP_03928945.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Acidaminococcus sp. D21] gi|226904257|gb|EEH90175.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Acidaminococcus sp. D21] Length = 626 Score = 493 bits (1269), Expect = e-137, Method: Compositional matrix adjust. Identities = 275/625 (44%), Positives = 373/625 (59%), Gaps = 26/625 (4%) Query: 12 GGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGR 71 G GHAGCEAA AA++G T L T I M CNP++GG KGHLVREIDAL G MG Sbjct: 13 GAGHAGCEAALAAARMGKKTLLATLSMDNIALMPCNPSVGGPAKGHLVREIDALGGQMGI 72 Query: 72 VADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEK 131 AD A IQ R+LN KG AV+ R QAD+ LY M+ + + ENLDV Q + Sbjct: 73 AADEACIQMRMLNTGKGYAVQALRAQADKPLYHTIMKEVVENTENLDVKQLMIDELLVRG 132 Query: 132 NIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDF 191 + IV + + V+L TGT+LRG I G++ AG G + L +S +K Sbjct: 133 GAVEGIVAETGEVFEAPCVILATGTYLRGRILYGEVAYMAGPNGQRSAMKLTDSLVKAGL 192 Query: 192 DTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTNLETHR 251 R KTGTPAR+D +TI + +TE Q+ DE + FSF++ +Q+ C +T TN TH+ Sbjct: 193 TLMRFKTGTPARVDRRTIDFSRTEPQYGDEAVRNFSFISPITERQQVPCYLTYTNPRTHQ 252 Query: 252 IIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGIS 311 II +N+ S +++G I+ GPRYCPSIE KIVRF +++ HQ+FLEPEGL T+ +Y G+S Sbjct: 253 IIRDNLDRSCMFNGTIEGVGPRYCPSIEAKIVRFADKSRHQLFLEPEGLRTNEIYVQGMS 312 Query: 312 TALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQING 371 ++LP EIQ F++TIPGLE ++R GYAIEYD ++P +L +LE K I GLF GQ NG Sbjct: 313 SSLPAEIQVAFMQTIPGLEHCKMMRAGYAIEYDCLDPLQLTASLEHKAIKGLFSCGQANG 372 Query: 372 TTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRA 431 T+GYEEAAAQGL+AGIN+A K + R+D+YIGV+IDDL +KG EPYRM TSRA Sbjct: 373 TSGYEEAAAQGLMAGINAALKLDHRPPFILGRSDAYIGVLIDDLVTKGTTEPYRMMTSRA 432 Query: 432 EYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSST 491 EYR+ LR DNAD RLT G +G + + R F K E R+L L+ KNL+ + Sbjct: 433 EYRLLLRQDNADLRLTQKGRNVGLVKDDRYTAFTKKRDEIE--RAL---FALSKKNLAPS 487 Query: 492 -----------SISFKQDGKTRTAYEFLSYPDFS---IQNLFSICPDARKFSSLVIERLQ 537 S+ K + E L P+ + +Q F + P S + E + Sbjct: 488 EENQQKIMAMGSVPLK---SSINMMELLRRPEITYEKLQQAFDLEP----LSPVAAEEVD 540 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 +E Y Y +Q E E RL+P D DYS+L LS+E EKL +P ++ QAS+ Sbjct: 541 VEVKYKGYIDKQKQEVMRAMKLENRLLPDDIDYSALHELSSEAAEKLEKQRPLSIGQASR 600 Query: 598 IEGMTPAALNLLLIYIKKNTVKLNE 622 I G++PA +++L++Y++ K E Sbjct: 601 ISGVSPADISVLMVYLESRRRKGEE 625 >gi|157738409|ref|YP_001491093.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Arcobacter butzleri RM4018] gi|205831487|sp|A8EWV0|MNMG_ARCB4 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|157700263|gb|ABV68423.1| glucose inhibited division protein A [Arcobacter butzleri RM4018] Length = 625 Score = 493 bits (1269), Expect = e-137, Method: Compositional matrix adjust. Identities = 269/611 (44%), Positives = 363/611 (59%), Gaps = 6/611 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+GGGHAG EA+ +A++G T LIT IG+ SCNPAIGGL KGHLVRE+DA Sbjct: 2 NYDVIVVGGGHAGIEASLASARMGKKTLLITMLVEQIGAASCNPAIGGLAKGHLVRELDA 61 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 + G MG D GIQFR+LN KG AV+G R Q D + YR M++ + NL+V Q EV Sbjct: 62 IGGEMGLCTDNTGIQFRILNASKGAAVQGSRAQIDMDKYREYMRKVCHNTPNLEVYQDEV 121 Query: 125 AGFNTEK-NIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 + N + + + VVLTTGTF+RG++HIG+ K AGR + PS +L Sbjct: 122 TALLVKNDNEVCGVKTKLTEEFIAKKVVLTTGTFMRGLVHIGENKYEAGRAWELPSTTLS 181 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK--ITNRQIECG 241 + GRLKTGTP+RLD +I + + D PFSF T+K Q C Sbjct: 182 TQLKELGLRVGRLKTGTPSRLDANSIDFSVMDMHGGDVNPAPFSFRTNKSDFAPTQFPCY 241 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT TN +TH II N + +++G I+ GPRYCPSIEDK+ RF ER+ HQ+FLEP+ Sbjct: 242 ITYTNEKTHEIISSNFYRAPLFTGQIEGLGPRYCPSIEDKVNRFAERDRHQLFLEPQTAM 301 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 Y NG+S++LP ++Q I ++ GLE IIR GYAIEYDY++P EL TLETKKI Sbjct: 302 CTEYYINGMSSSLPIDVQKAMIHSVKGLENAKIIRYGYAIEYDYVDPTELKHTLETKKIK 361 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 L+ AGQIN TTGYEEAAAQGL+AGIN+ ++ + R ++YIGV+IDDL +KG Sbjct: 362 NLYHAGQINATTGYEEAAAQGLIAGINACLSIDEKEPFILRRDEAYIGVLIDDLVTKGTN 421 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+ LR +NAD RL+ G K G I + K+ + + + Sbjct: 422 EPYRMFTSRAEYRLLLREENADLRLSQYGHKFGLIDDETIKKVENKRKTIEEAIEFMANE 481 Query: 482 VLTSKNLS---STSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 +TSK + SI ++ + + I + P + + E++ I Sbjct: 482 WMTSKKETLELLESIGEEKINDRVLLVDLIGRNSIDIFKFEKLVPSFAHLDNYLKEQIII 541 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E+ Y Y +Q + +++K K IP+ F Y LP LSNE+ EKL +P + AS I Sbjct: 542 EAKYYRYIQKQQKQIEKMKKMLKATIPESFSYKGLPGLSNEVVEKLEKHRPPTIFNASLI 601 Query: 599 EGMTPAALNLL 609 G+TPAAL+++ Sbjct: 602 SGVTPAALDII 612 >gi|118475109|ref|YP_892585.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Campylobacter fetus subsp. fetus 82-40] gi|205831518|sp|A0RQV2|MNMG_CAMFF RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|118414335|gb|ABK82755.1| glucose-inhibited division protein A [Campylobacter fetus subsp. fetus 82-40] Length = 621 Score = 493 bits (1269), Expect = e-137, Method: Compositional matrix adjust. Identities = 288/637 (45%), Positives = 382/637 (59%), Gaps = 41/637 (6%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+GGGHAG EA+ AAK+GA T LIT IG+ SCNPAIGGL KGHLV+EIDA Sbjct: 2 NYDVIVVGGGHAGIEASLAAAKMGAKTLLITILAEQIGAASCNPAIGGLAKGHLVKEIDA 61 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG DA GIQFR+LN KGPAVRG R Q D + YR+ M+ +L+ NL+V Q E+ Sbjct: 62 LGGQMGLTTDACGIQFRLLNESKGPAVRGSRAQIDMDRYRVYMRNLLLNTPNLEVTQ-EI 120 Query: 125 AG--FNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 A + NII DN+ +++TTGTFL G+IH+G K+ AGR+G+ S SL Sbjct: 121 ATEILTKDNNIIGVKTHLDNNY-GTKKLIITTGTFLNGLIHVGFNKLEAGRVGELSSKSL 179 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGI 242 S + + GRLKTGT R+ K+I + E+Q D+ PFSF T + Q+ C I Sbjct: 180 SASLKSLNLEMGRLKTGTCPRVLAKSIDFSVLERQDGDQDPTPFSFRTKEFNKTQLPCYI 239 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 TN +TH II N + +++G I+ GPRYCPSIEDKI RFG+R H +F+EP+ Sbjct: 240 AYTNEKTHEIIRSNFDRAPLFTGQIEGIGPRYCPSIEDKINRFGDRERHHLFIEPQTREA 299 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 Y NG ST+LP + Q + +R++ G + I+R GYAIEYDY++P EL TLETKKI+G Sbjct: 300 TEYYINGFSTSLPYDAQVEMLRSVKGFQNAKIVRHGYAIEYDYVSPTELKHTLETKKING 359 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+LAGQINGTTGYEEAAAQGL+AGIN+A + + R +SYIGV+IDDL +KG E Sbjct: 360 LYLAGQINGTTGYEEAAAQGLMAGINAALNLKTREPLILRRDESYIGVLIDDLVTKGTKE 419 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS-- 480 PYRMFTSRAEYR+ LR DNA+ RL+ G +G + + + K L+S L+ Sbjct: 420 PYRMFTSRAEYRLLLREDNANLRLSKYGYNVGLLPKEAFEEMLK-------LKSNLEKGM 472 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ--- 537 +L +K++S + EFL+ D I N S IE+L+ Sbjct: 473 EILLTKDMSP----------NKENLEFLASIDEDIINEKVPLQKIAARKSFTIEKLRKLN 522 Query: 538 ---------------IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKE 582 E+ Y Y +Q IE +++K IPK ++ S+ LSNE+ E Sbjct: 523 EFFLNLDDKSLNQILTEAKYYHYIAQQQIEVEKMKGLLDIKIPKSLEFKSISGLSNEVVE 582 Query: 583 KLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 KL+ P L AS I G+TP A+++L I IK + K Sbjct: 583 KLNKFAPPTLAAASNISGITPVAIDILHIAIKYHCQK 619 >gi|315151267|gb|EFT95283.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterococcus faecalis TX0012] Length = 632 Score = 493 bits (1269), Expect = e-137, Method: Compositional matrix adjust. Identities = 270/625 (43%), Positives = 383/625 (61%), Gaps = 16/625 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+G GHAG EAA AA++G T L+T + M CNP++GG KG +VREIDA Sbjct: 8 SYDVIVVGAGHAGSEAALAAARMGVKTLLLTINLDMVAFMPCNPSVGGPAKGVVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ R+LN KGPAVR R QAD+ Y M+ I + NL + QG V Sbjct: 68 LGGEMGKNIDKTYIQMRMLNTGKGPAVRALRAQADKHAYATEMKHTIEKEGNLTLRQGIV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + +V + R VV+T GT LRG I IG+LK +G PS L N Sbjct: 128 EELIVEDGVCRGVVTSTGAAYRSQAVVITAGTALRGEIIIGELKYSSGPNNSQPSVGLAN 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNRQIE-CGI 242 + + R KTGTP R+ TI + TE+Q D+ FS+ T D N+ E C + Sbjct: 188 HLKELGLEIDRFKTGTPPRVKSSTIDYSVTEEQPGDKEPNHFSYSTPDSAYNQNQEPCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II +N+ + +++G ++ G RYCPSIEDKIVRF ++ HQ+FLEPEGLNT Sbjct: 248 TYTNETTHEIIQKNLHRAPMFTGIVEGVGARYCPSIEDKIVRFADKPRHQLFLEPEGLNT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q + + +I GLEKV ++R GYAIEYD + P +L PTLETK I Sbjct: 308 EEVYVQGLSTSLPEDVQTEMLHSIEGLEKVEMMRTGYAIEYDVVVPHQLRPTLETKVIEN 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQ NGT+GYEEAA QGL+AGIN+A K + + R+D YIGVMIDDL +KG E Sbjct: 368 LYTAGQTNGTSGYEEAAGQGLMAGINAALKIQGKEPLVLKRSDGYIGVMIDDLVTKGTNE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRS----LL 478 PYR+ TSRAEYR+ LR DNAD RLT +G ++G + +++++A Y+ + + + L Sbjct: 428 PYRLLTSRAEYRLILRHDNADLRLTEMGHEIGLV---KEEQYAAYLVKKAAVEAEIARLG 484 Query: 479 KSLVLTSKN----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARK-FSSLVI 533 K + +K L + + +DG A +FL P+ S Q + P + VI Sbjct: 485 KHRIKPTKEVQAFLETKGAAGLKDGI--LARDFLKRPEISYQEVAQFIPAPEEALDPKVI 542 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I+ Y Y + M + +++K E + IP++ DY ++ L+ E K+KL ++P + Sbjct: 543 EQVEIQIKYEGYIKKAMEKVEKLKRMEAKRIPENIDYQAINGLATEAKQKLQKIQPETIA 602 Query: 594 QASKIEGMTPAALNLLLIYIKKNTV 618 QAS+I G+ PA +++L++YI++ + Sbjct: 603 QASRISGVNPADISILMVYIEQGKI 627 >gi|331083513|ref|ZP_08332625.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Lachnospiraceae bacterium 6_1_63FAA] gi|330404206|gb|EGG83754.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Lachnospiraceae bacterium 6_1_63FAA] Length = 627 Score = 493 bits (1268), Expect = e-137, Method: Compositional matrix adjust. Identities = 260/634 (41%), Positives = 382/634 (60%), Gaps = 35/634 (5%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 ++ +YDV ++G GHAGCEAA A+LG T + T +I M CNP IGG KGHLV+ Sbjct: 3 VLTENYDVAIVGAGHAGCEAALACARLGLETIMFTVSVDSIALMPCNPNIGGSSKGHLVK 62 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G MG+ D IQ ++LNV KGPAV R QAD++ Y M++ + + E+L + Sbjct: 63 EIDALGGEMGKNIDKTFIQSKMLNVSKGPAVHSLRAQADKQEYTREMRKTLENTEHLTIR 122 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q EV E ++ + + R VVL TGT+L+ G + G G +N Sbjct: 123 QAEVTKIMAEDGVVKGVKTYSGAEYRTKAVVLCTGTYLKARCIYGDISNETGPNGLQAAN 182 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQI 238 L NS + + R KTGTPAR+D ++I + K E+QF DER++PFSF T + + QI Sbjct: 183 YLTNSLKELGIEMYRFKTGTPARIDKRSIDFSKMEEQFGDERVVPFSFSTNPEDVQIDQI 242 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C +T TN +TH II N+ S +YSG I+ GPRYCPSIEDK+V+F ++N HQ+F+EPE Sbjct: 243 SCWLTYTNEKTHEIIRNNLDRSPLYSGMIEGTGPRYCPSIEDKVVKFADKNRHQVFIEPE 302 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL+T+ +Y G+S++LPE++Q++ ++PGLE I+R YAIEYD I+ ++L+PTLE K Sbjct: 303 GLSTNEMYIGGMSSSLPEDVQYEMYHSVPGLENAKIVRNAYAIEYDCIDARQLYPTLEFK 362 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I GLF GQ NG++GYEEAAAQGLVAGIN+A + + + R++SYIGV+IDDL +K Sbjct: 363 NIKGLFSGGQFNGSSGYEEAAAQGLVAGINAAMEVLGREQLVLDRSESYIGVLIDDLVTK 422 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 EPYRM TSRAEYR+ LR DNAD RL G ++G + + ++Y++++ Sbjct: 423 ENREPYRMMTSRAEYRLLLRQDNADLRLREKGYQVGLVTQ----------EQYDYIQWKK 472 Query: 479 KSLVLTSKNLSSTSISFKQDGKTRTAYEFL-SYPDFSIQNLFS--------------ICP 523 + + ++ + + G + E L Y ++N S + P Sbjct: 473 EKIEEETQRMEHVHV-----GAVKEVQELLEQYGSTPLKNGISLGDLIRRPELSYDIVAP 527 Query: 524 DARKFSSL---VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNEL 580 +K L V E++ I Y Y RQ+ + + K E + +PKD DY ++ L E Sbjct: 528 LDKKRPELPYDVREQININIKYDGYIRRQLKQVEGFKKLENKKLPKDIDYDAISGLRIEA 587 Query: 581 KEKLSILKPFNLLQASKIEGMTPAALNLLLIYIK 614 K+KL+ +P ++ QAS+I G++PA +++LL+Y++ Sbjct: 588 KQKLNAYRPISIGQASRIAGVSPADISVLLVYME 621 >gi|224437483|ref|ZP_03658445.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Helicobacter cinaedi CCUG 18818] gi|313143939|ref|ZP_07806132.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Helicobacter cinaedi CCUG 18818] gi|313128970|gb|EFR46587.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Helicobacter cinaedi CCUG 18818] Length = 632 Score = 493 bits (1268), Expect = e-137, Method: Compositional matrix adjust. Identities = 274/630 (43%), Positives = 375/630 (59%), Gaps = 32/630 (5%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+V+GGGHAG EA+ +AK+GA T L+T I SCNPA+GGLGKGHLV+EIDAL Sbjct: 3 YDVLVVGGGHAGLEASIASAKMGAKTHLLTLLIQNIALASCNPAVGGLGKGHLVKEIDAL 62 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+MG + D GIQFR+LN KGPAVRG R Q D + Y + + L+ NL + Q V Sbjct: 63 GGVMGEITDKCGIQFRILNSSKGPAVRGTRAQIDMDRYSIIAKDIALNTPNLTLSQESVE 122 Query: 126 GFNTEKN-----IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 E++ I + V+LTTGTFLRG++HIG+ KI GR G+ Sbjct: 123 SLIYEQDSQGRFIAKGVKTNIGKTYYAKAVILTTGTFLRGLVHIGESKIQNGRFGEMSPQ 182 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 +L S + GRLKTGT AR+DG++I + + E D FS T Q+ C Sbjct: 183 NLSTSLQELGLSLGRLKTGTCARIDGRSIDFSRLETHSGDSNPPHFSHKTKDFAPTQLPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +T TN +TH II N + +++G I+ GPRYCPSIEDKI RF ++ HQ+FLEP+ Sbjct: 243 FVTYTNEKTHNIIRSNFHRAPLFTGQIEGVGPRYCPSIEDKINRFADKERHQLFLEPQTQ 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 Y NG++T+LP ++Q + I +I GLE +I R GYAIEYDY+ P EL+ TLETKK Sbjct: 303 EAVEYYINGLTTSLPIDVQEEMIHSIEGLENAHITRYGYAIEYDYVEPTELYHTLETKKC 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 + LFLAGQINGTTGYEEAAAQG++AGIN+A S K + +R ++YIGVMIDDL +KG Sbjct: 363 ANLFLAGQINGTTGYEEAAAQGIMAGINAAL-SLKGESFSLARNEAYIGVMIDDLVTKGT 421 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIG----ERRQKRFAKYIQEYNFLRS 476 EPYR+FTSRAEYR+ LR DNA RL P LG + E+ + I N+L++ Sbjct: 422 KEPYRVFTSRAEYRLLLREDNAYLRLVPYAFALGLVTKEYYEKTMQDKEHIINTMNYLQN 481 Query: 477 -----------LLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSIC--P 523 +LKSL L+ +S ++ G+ ++ L + C Sbjct: 482 NYLTPSQISLDMLKSLNLSP--ISDKTLLIHIIGREELE-------PHRLRTLLAKCGVE 532 Query: 524 DARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEK 583 + S IE++ IES Y Y +Q + +++ + IP+DF + +P LS E+ EK Sbjct: 533 NVESMSEKAIEQIFIESKYFDYIQKQKEQIGQMEQMLQVEIPRDFVFDKIPGLSLEVIEK 592 Query: 584 LSILKPFNLLQASKIEGMTPAALNLLLIYI 613 L P +L +AS+I G+TPA++++L +YI Sbjct: 593 LKKFTPKSLFEASEISGITPASIDVLHLYI 622 >gi|126701302|ref|YP_001090199.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium difficile 630] gi|255102893|ref|ZP_05331870.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium difficile QCD-63q42] gi|255308713|ref|ZP_05352884.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium difficile ATCC 43255] gi|122973577|sp|Q181S8|MNMG_CLOD6 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|115252739|emb|CAJ70584.1| transfer RNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG (Glucose-inhibited division protein A) [Clostridium difficile] Length = 631 Score = 493 bits (1268), Expect = e-137, Method: Compositional matrix adjust. Identities = 268/618 (43%), Positives = 378/618 (61%), Gaps = 13/618 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAA A++G T +IT +I M CNP+IGG GKG LV+EIDAL Sbjct: 9 YDVIVVGAGHAGCEAALATARMGYKTLIITMSLDSIALMPCNPSIGGTGKGQLVKEIDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG D IQ R+LN KGPAV R QAD+ Y M++ + + NLD+ EV Sbjct: 69 GGQMGLNIDKTYIQSRMLNTAKGPAVHSLRAQADKFKYHEEMKKTLEDEPNLDIAMDEVV 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E N++ + + + V+L TG +L I++G++ G + L +S Sbjct: 129 EILHEGNVVIGVGTKLGCSFKSKAVILATGVYLNSKIYMGEVAFYEGPNALGYAKYLTDS 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 ++ R KTGTPAR+ +I + Q DE++ PFSFM + I +Q C +TRT Sbjct: 189 LVELGLRMRRFKTGTPARVHRDSIDFSVMSLQEGDEKVTPFSFMNENIEKKQEPCYLTRT 248 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 ET ++I++N+K SA+YSG I+S GPRYCPSIEDK+VRF ++ HQ+F+EPEGLNT + Sbjct: 249 TEETQKVILDNLKRSAMYSGVIESTGPRYCPSIEDKVVRFSDKTSHQLFIEPEGLNTKEM 308 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y GIST+LP E+Q +TI GLE I+RP YAIEYD ++P +L +LE K + LF Sbjct: 309 YIQGISTSLPFEVQLDMYKTIKGLENCKIMRPAYAIEYDCVDPTQLKISLEIKGVENLFS 368 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ NGT+GYEEAAAQGL+AGIN+ RK + R+++YIGV++DDL +KG EPYR Sbjct: 369 AGQFNGTSGYEEAAAQGLMAGINAVRKIEGKEPFVLDRSEAYIGVLLDDLVTKGTNEPYR 428 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF--AKYIQEYNFLRSLLKSLVL 483 M TSRAEYR+ LR DNAD RLT G +G + + R +RF K E F R LK+ + Sbjct: 429 MMTSRAEYRLYLRQDNADMRLTQKGYDIGLVKKDRYERFLNKKAAVEKEFER--LKNERV 486 Query: 484 TSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDA-RKFSSLVIERLQ 537 T K ++S ++ G T + YEFL P+ + + L + A S V E+ Sbjct: 487 TPKEVNSL---LEEKGATPIKVGISLYEFLKRPEVTYELLEELGKGAGDDVSREVKEQCV 543 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I + Y Y +Q+ + + K E + + + +YSS+ L E ++KL +KP ++ QAS+ Sbjct: 544 IITKYEGYIEKQLKQIDQFKKLENKKLDEKINYSSIEGLRLEARQKLDDIKPISIGQASR 603 Query: 598 IEGMTPAALNLLLIYIKK 615 I G++PA +++LLIY+++ Sbjct: 604 ISGVSPADISVLLIYLEQ 621 >gi|323486761|ref|ZP_08092080.1| hypothetical protein HMPREF9474_03831 [Clostridium symbiosum WAL-14163] gi|323694903|ref|ZP_08109053.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium symbiosum WAL-14673] gi|323399900|gb|EGA92279.1| hypothetical protein HMPREF9474_03831 [Clostridium symbiosum WAL-14163] gi|323500993|gb|EGB16905.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium symbiosum WAL-14673] Length = 640 Score = 493 bits (1268), Expect = e-137, Method: Compositional matrix adjust. Identities = 266/622 (42%), Positives = 378/622 (60%), Gaps = 11/622 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +YD++V+G GHAGCEAA AA+LG T + T +I M CNP IGG KGHLVRE Sbjct: 4 LTENYDIVVVGAGHAGCEAALAAARLGFETIIFTVSVDSIALMPCNPNIGGSSKGHLVRE 63 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DAL G MG+ D IQ ++LN KGPAV R QAD++ Y M+ + + ++L + Q Sbjct: 64 LDALGGEMGKNIDETFIQSKMLNQSKGPAVHSLRAQADKQAYTKRMRHTLENTKHLTIRQ 123 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 GEV + I I ++ C V+L TGT+LR G + P G G +N Sbjct: 124 GEVCEILAKDGKIEGIKTFSGAVYYCKAVILATGTYLRARCIYGDVSNPTGPNGLQAANH 183 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KITNRQIE 239 L S + R KTGTPAR+D ++I + K E+QF DER+IPFSF TD + Q+ Sbjct: 184 LTESLKNLGIEMYRFKTGTPARVDKRSIDFTKMEEQFGDERVIPFSFSTDPESVQKEQVS 243 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +T TN +TH II EN+ S ++SG I+ GPRYCPSIEDK+V+F ++ HQ+F+EPEG Sbjct: 244 CWLTYTNEKTHEIIRENLDRSPLFSGAIEGTGPRYCPSIEDKVVKFPDKIRHQVFVEPEG 303 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T+ +Y G+S++LPE++Q RT+PGLE V I+R YAIEYD IN ++L +LE K Sbjct: 304 LYTNEMYLAGMSSSLPEDVQFAMYRTVPGLENVKIVRNAYAIEYDCINSRQLKASLEFKN 363 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF GQ NG++GYEEAA QG +AG+N+ARK + I R+ +YIGV+IDDL +K Sbjct: 364 IEGLFSGGQFNGSSGYEEAAVQGFMAGVNAARKIQGKEPIILDRSQAYIGVLIDDLVTKE 423 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF----AKYIQEYNFLR 475 EPYRM TSRAEYR+ LR DNAD RL+ IG ++G + + +R + QE + Sbjct: 424 SHEPYRMMTSRAEYRLLLRQDNADLRLSAIGHEIGLVSDELYERILWKESAIAQE---VT 480 Query: 476 SLLKSLVLTSKNLSSTSISFKQDG-KTRTAY-EFLSYPDFSIQNLFSICPDARKFSSLVI 533 L K + +K + +S KT T E + P+ L I P+ V Sbjct: 481 RLEKKTIGATKEVQEFLVSHDSTPLKTGTTLAELVRRPELDYVMLTEIDPERPSLPEDVA 540 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E++ I Y Y RQM + + K E + + ++FDYS + +L E +KL++ KP N+ Sbjct: 541 EQININIKYEGYIRRQMQQVAQFKKMEGKKLDENFDYSEVKSLRKEAVQKLNLYKPANIG 600 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I G++PA +++L++++++ Sbjct: 601 QASRISGVSPADISVLMVHLEQ 622 >gi|325126644|gb|ADY85974.1| Glucose inhibited division protein A [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 631 Score = 493 bits (1268), Expect = e-137, Method: Compositional matrix adjust. Identities = 267/622 (42%), Positives = 374/622 (60%), Gaps = 13/622 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 ++ YDVIV+G GHAGCEAA +A++G T L+T + M CNP++GG KG +VRE Sbjct: 5 VSNEYDVIVVGAGHAGCEAALASARMGEKTLLLTISLDMVAFMPCNPSVGGPAKGTVVRE 64 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G MG+ D IQ R+LN KGPAVR R QAD+ Y M+R I + NL + Q Sbjct: 65 IDALGGEMGKNIDKTYIQMRMLNTGKGPAVRALRAQADKWDYHEEMKRTIENTPNLTLRQ 124 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E +V + R +VVLTTGT RG I IG+L +G P+ Sbjct: 125 AVVDDLIVEDGECRGVVTNTGARYRAKSVVLTTGTAARGRIFIGELNYSSGPNNTIPAIK 184 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT---DKITNRQI 238 L S + F R KTGTP R++ TI + KTE++ D+ FSF + D +T+ Q Sbjct: 185 LSESLERLGFKLRRFKTGTPPRVNRHTIDYSKTEEEPGDKEPRHFSFTSRDEDYLTD-QT 243 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C +T TN +TH II EN+ S ++SGDI GPRYCPSIE K+VRF +++ HQIFLEPE Sbjct: 244 SCWMTYTNPKTHEIINENLDRSPMFSGDIVGVGPRYCPSIETKVVRFADKDRHQIFLEPE 303 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 G T+ +Y ST++PEE+Q + + T+ GLEKV ++RPGYAIEYD ++P +L TLETK Sbjct: 304 GRKTEEIYVGDFSTSMPEEVQLEMLHTVAGLEKVEMMRPGYAIEYDVVDPWQLTHTLETK 363 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 +I L+ AGQ+NGT+GYEEAA QGL+AGIN+A + R ++YIGV+IDDL +K Sbjct: 364 RIKHLYTAGQMNGTSGYEEAAGQGLIAGINAALSAEGKPAFTLGRDEAYIGVLIDDLVTK 423 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYR+ TSRAEYR+ LR DNAD RLT G LG I + R+A+++ + ++ L Sbjct: 424 GTEEPYRLLTSRAEYRLLLRHDNADLRLTEKGHDLGLIDD---DRYAEFLAKKELIQEDL 480 Query: 479 KSL-VLTSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLV 532 L +T + + G+T A FL P +++++ + V Sbjct: 481 DRLGEITVHPTIAVNEYLAGLGQTDLNGGVKADVFLRRPRVTVEDVERLTGQKLAGDRYV 540 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 E+++I YA Y +Q I+ ++ +E + IPKD DY + L+ E +EKL+ ++P L Sbjct: 541 KEQVEIYIKYAGYIKKQEIQVARLRRQEAKKIPKDIDYDQIEGLATEAREKLAKIRPETL 600 Query: 593 LQASKIEGMTPAALNLLLIYIK 614 QA +I G+ PA L +L +Y++ Sbjct: 601 AQAERISGVNPADLAILSVYVQ 622 >gi|260588824|ref|ZP_05854737.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Blautia hansenii DSM 20583] gi|260540603|gb|EEX21172.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Blautia hansenii DSM 20583] Length = 627 Score = 493 bits (1268), Expect = e-137, Method: Compositional matrix adjust. Identities = 260/634 (41%), Positives = 382/634 (60%), Gaps = 35/634 (5%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 ++ +YDV ++G GHAGCEAA A+LG T + T +I M CNP IGG KGHLV+ Sbjct: 3 VLTENYDVAIVGAGHAGCEAALACARLGLETIMFTVSVDSIALMPCNPNIGGSSKGHLVK 62 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G MG+ D IQ ++LNV KGPAV R QAD++ Y M++ + + E+L + Sbjct: 63 EIDALGGEMGKNIDKTFIQSKMLNVSKGPAVHSLRAQADKQEYTREMRKTLENTEHLTIR 122 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q EV E ++ + + R VVL TGT+L+ G + G G +N Sbjct: 123 QAEVTKIMAEDGVVKGVKTYSGAEYRTKAVVLCTGTYLKARCIYGDISNETGPNGLQAAN 182 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQI 238 L NS + + R KTGTPAR+D ++I + K E+QF DER++PFSF T + + QI Sbjct: 183 YLTNSLKELGIEMYRFKTGTPARIDKRSIDFSKMEEQFGDERVVPFSFSTNPEDVQIDQI 242 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C +T TN +TH II N+ S +YSG I+ GPRYCPSIEDK+V+F ++N HQ+F+EPE Sbjct: 243 SCWLTYTNEKTHEIIRNNLDRSPLYSGMIEGTGPRYCPSIEDKVVKFADKNRHQVFIEPE 302 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL+T+ +Y G+S++LPE++Q++ ++PGLE I+R YAIEYD I+ ++L+PTLE K Sbjct: 303 GLSTNEMYIGGMSSSLPEDVQYEMYHSVPGLENAKIVRNAYAIEYDCIDARQLYPTLEFK 362 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I GLF GQ NG++GYEEAAAQGLVAGIN+A + + + R++SYIGV+IDDL +K Sbjct: 363 NIKGLFSGGQFNGSSGYEEAAAQGLVAGINAAMEVLGREQLVLDRSESYIGVLIDDLVTK 422 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 EPYRM TSRAEYR+ LR DNAD RL G ++G + + ++Y++++ Sbjct: 423 ENREPYRMMTSRAEYRLLLRQDNADLRLREKGYQVGLVTQ----------EQYDYIQWKK 472 Query: 479 KSLVLTSKNLSSTSISFKQDGKTRTAYEFL-SYPDFSIQNLFS--------------ICP 523 + + ++ + + G + E L Y ++N S + P Sbjct: 473 EKIEEETQRMEHIHV-----GAVKEVQELLQQYGSTPLKNGISLGDLIRRPELSYDIVAP 527 Query: 524 DARKFSSL---VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNEL 580 +K L V E++ I Y Y RQ+ + + K E + +PKD DY ++ L E Sbjct: 528 LDKKRPELPYDVREQININIKYDGYIRRQLKQVEGFKKLENKKLPKDIDYDAISGLRIEA 587 Query: 581 KEKLSILKPFNLLQASKIEGMTPAALNLLLIYIK 614 K+KL+ +P ++ QAS+I G++PA +++LL+Y++ Sbjct: 588 KQKLNAYRPISIGQASRIAGVSPADISVLLVYME 621 >gi|315636706|ref|ZP_07891936.1| glucose inhibited division protein A [Arcobacter butzleri JV22] gi|315479021|gb|EFU69724.1| glucose inhibited division protein A [Arcobacter butzleri JV22] Length = 625 Score = 493 bits (1268), Expect = e-137, Method: Compositional matrix adjust. Identities = 272/622 (43%), Positives = 368/622 (59%), Gaps = 10/622 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+GGGHAG EA+ +A++G T LIT IG+ SCNPAIGGL KGHLVRE+DA Sbjct: 2 NYDVIVVGGGHAGIEASLASARMGKKTLLITMLVEQIGAASCNPAIGGLAKGHLVRELDA 61 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 + G MG D GIQFR+LN KG AV+G R Q D + YR M++ + NL+V Q EV Sbjct: 62 IGGEMGLCTDNTGIQFRILNASKGAAVQGSRAQIDMDKYREYMRKVCHNTPNLEVYQDEV 121 Query: 125 AGFNTEK-NIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 + N + + + VVLTTGTF+RG++HIG+ K AGR + PS +L Sbjct: 122 TALLVKNGNEVCGVKTKLTEEFIAKKVVLTTGTFMRGLVHIGENKYEAGRAWELPSTTLS 181 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK--ITNRQIECG 241 + GRLKTGTP+RLD +I + + D PFSF T+K Q C Sbjct: 182 TQLKELGLRVGRLKTGTPSRLDANSIDFSVMDMHGGDVNPAPFSFRTNKSDFAPTQFPCY 241 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT TN +TH II N + +++G I+ GPRYCPSIEDK+ RF ER+ HQ+FLEP+ Sbjct: 242 ITYTNEKTHEIISSNFYRAPLFTGQIEGLGPRYCPSIEDKVNRFAERDRHQLFLEPQTAM 301 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 Y NG+S++LP ++Q I ++ GLE IIR GYAIEYDY++P EL TLETKKI Sbjct: 302 CTEYYINGMSSSLPIDVQKAMIHSVKGLENAKIIRYGYAIEYDYVDPTELKHTLETKKIK 361 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 L+ AGQIN TTGYEEAAAQGL+AGIN+ ++ + R ++YIGV+IDDL +KG Sbjct: 362 NLYHAGQINATTGYEEAAAQGLIAGINACLSIDEKEPFILRRDEAYIGVLIDDLVTKGTN 421 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+ LR +NAD RL+ G + G I + K+ + + + Sbjct: 422 EPYRMFTSRAEYRLLLREENADLRLSQYGYEFGLIDDETIKKVENKRKTIEEAIEFMANE 481 Query: 482 VLTSKNLS---STSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 +TSK + SI ++ + + I + P + + E++ I Sbjct: 482 WMTSKKETLELLESIGEEKINDRVLLVDLIGRNSIDIFKFEKLVPSFAHLDNYLKEQIII 541 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E+ Y Y +Q + +++K K IP+ F Y LP LSNE+ EKL +P + AS I Sbjct: 542 EAKYYRYIQKQQKQIEKMKKMLKATIPESFSYKGLPGLSNEVVEKLEKHRPPTIFNASLI 601 Query: 599 EGMTPAALNL----LLIYIKKN 616 G+TPAAL++ L I++K N Sbjct: 602 SGVTPAALDIIHLNLNIFVKSN 623 >gi|257871381|ref|ZP_05651034.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Enterococcus gallinarum EG2] gi|257805545|gb|EEV34367.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Enterococcus gallinarum EG2] Length = 633 Score = 492 bits (1267), Expect = e-137, Method: Compositional matrix adjust. Identities = 261/621 (42%), Positives = 375/621 (60%), Gaps = 11/621 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 Y+VIV+G GHAG EAA A+++G T L+T + M CNP++GG KG +VREIDAL Sbjct: 9 YEVIVVGAGHAGSEAALAASRMGCKTLLLTINLDMVAFMPCNPSVGGPAKGVVVREIDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ D IQ R+LN KGPAVR R QAD+ Y M++ I ++NL + QG V Sbjct: 69 GGEMGKNIDKTYIQMRMLNTGKGPAVRALRAQADKHAYASEMKKTIEMEQNLTLRQGIVE 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E I +V + + +V++T GT LRG I IG+LK +G PS L + Sbjct: 129 KLIVEDGICKGVVTATGARYQAKSVIITAGTALRGEIIIGELKYSSGPNNSQPSIGLADH 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 + + R KTGTP R+ TI +D TE Q DE FS+ T + Q C +T Sbjct: 189 LKELGLEIARFKTGTPPRVKSSTINYDVTEIQPGDEAPNHFSYSTPDSQYKTNQEPCWLT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH+II +N+ + +++G ++ G RYCPSIEDKIVRF +++ HQ+FLEPEGL+T+ Sbjct: 249 YTNEHTHQIINDNLHRAPMFTGIVEGVGARYCPSIEDKIVRFADKSRHQLFLEPEGLDTE 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE++Q + +I GLEKV ++R GYAIEYD + P +L PTLETK I+ L Sbjct: 309 EVYVQGLSTSLPEDVQVNMLHSIAGLEKVEMMRTGYAIEYDVVVPHQLRPTLETKVIANL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ NGT+GYEEAA QGL+AGIN+A K + R+D YIGVMIDDL +KG EP Sbjct: 369 FTAGQTNGTSGYEEAAGQGLIAGINAALKIQGKEPFIMKRSDGYIGVMIDDLVTKGTNEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL-V 482 YR+ TSRAEYR+ LR DNAD RLT +G ++G + E ++ Y+ + + ++ L Sbjct: 429 YRLLTSRAEYRLLLRHDNADLRLTEVGHQIGLVEE---PQYQAYLTKKTAVEEEIQRLKK 485 Query: 483 LTSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 + K S K+ G A EFL P+ + Q L IE+++ Sbjct: 486 VRIKPTPSVQTFLKEKGTAPLKDGVLANEFLRRPEVNYQELLQFIEANPALKPKEIEQVE 545 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ Y Y + + + +++K E + IP++ DY ++ L+ E K+KL ++P + QAS+ Sbjct: 546 IQIKYEGYIKKALEKVEKLKRMEAKRIPENIDYEAINGLATEAKQKLQKIQPETIAQASR 605 Query: 598 IEGMTPAALNLLLIYIKKNTV 618 I G+ PA +++L++Y+++ + Sbjct: 606 ISGVNPADISILMVYVEQGKI 626 >gi|167753844|ref|ZP_02425971.1| hypothetical protein ALIPUT_02129 [Alistipes putredinis DSM 17216] gi|167658469|gb|EDS02599.1| hypothetical protein ALIPUT_02129 [Alistipes putredinis DSM 17216] Length = 630 Score = 492 bits (1267), Expect = e-137, Method: Compositional matrix adjust. Identities = 263/622 (42%), Positives = 375/622 (60%), Gaps = 16/622 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IV+GGGHAGCEAA+ AA+LG+ T L+T + + MSCNPA+GG+ KG +VREIDAL Sbjct: 5 YDIIVVGGGHAGCEAASAAARLGSRTLLVTMDMTKLADMSCNPAVGGVAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MGR+ D +QFR+LN KG A+ PR Q D+ + +R + + NL + Q Sbjct: 65 GGQMGRITDLTAVQFRMLNRSKGAAMWSPRAQCDKSRFSAEWRRTLENTPNLYLWQDTAV 124 Query: 126 GF-------NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSP 178 + + I Q V+LT GTFL GV++ G+ GR GDS Sbjct: 125 ELLFGQRPAEEGRPQVRGIRTQMGVEFSADCVILTAGTFLAGVMYCGRSHAEGGRAGDSA 184 Query: 179 SNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQ 237 S+ + S + F+ GR+KTGTPARLD +TI ++ E Q+ DE FSF D Q Sbjct: 185 SHGVTESLVAMGFEAGRMKTGTPARLDARTINFEILEPQYGDENPSKFSFSADTHPVQNQ 244 Query: 238 IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 + C + T+ + H I+ + S +++G I+ GPRYCPSIEDK+ F +++ HQ+FLEP Sbjct: 245 LPCFLVYTSKKVHDILRKGFGDSPLFNGTIRGIGPRYCPSIEDKLNTFADKDQHQLFLEP 304 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EG +T+ Y NG S++LP +IQ + + I G E ++I RPGYAIEYDY P +L +LET Sbjct: 305 EGRSTNEYYLNGFSSSLPWDIQWEALHAIEGFEDLHIFRPGYAIEYDYFLPTQLHHSLET 364 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 K + GL+ AGQINGTTGYEEA AQG++AGIN+ R+ + + +R ++YIGV+IDDL + Sbjct: 365 KLVDGLYFAGQINGTTGYEEAGAQGVMAGINAHRRRMGEEPLVLARDEAYIGVLIDDLVT 424 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL 477 KGV EPYRMFTSRAEYRI LR DNAD RLTPIG K+G I ++R F K + L + Sbjct: 425 KGVDEPYRMFTSRAEYRILLRQDNADIRLTPIGYKIGLISQKRYDSFCKKNRLVESLVAF 484 Query: 478 LKSLVLTSKNLSSTSISFKQDG--KTRTAYEFLSYPDFSIQNLFSICPDARKF------S 529 + L + ++ S D + R ++ L + + L + P F Sbjct: 485 ARGLSVKPDEINDCLKSLGCDAISQGRKLHDLLMRNNVTFDLLSGVLPKLGDFLREQEMD 544 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 + V+E +I+ Y Y R+ A ++ E IP DFD+ S+ AL+ E ++KL+ ++P Sbjct: 545 AEVVEEAEIQIKYKGYIEREKFIADKLHRLENIRIPADFDFHSMNALTIEARQKLTRIRP 604 Query: 590 FNLLQASKIEGMTPAALNLLLI 611 + QAS+I G++PA +N+LL+ Sbjct: 605 ATIGQASRIPGVSPADVNVLLV 626 >gi|255657632|ref|ZP_05403041.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium difficile QCD-23m63] gi|296452687|ref|ZP_06894378.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium difficile NAP08] gi|296880061|ref|ZP_06904030.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium difficile NAP07] gi|296258469|gb|EFH05373.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium difficile NAP08] gi|296428928|gb|EFH14806.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium difficile NAP07] Length = 631 Score = 492 bits (1267), Expect = e-137, Method: Compositional matrix adjust. Identities = 268/618 (43%), Positives = 377/618 (61%), Gaps = 13/618 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAA A++G T +IT +I M CNP+IGG GKG LV+EIDAL Sbjct: 9 YDVIVVGAGHAGCEAALATARMGYKTLIITMSLDSIALMPCNPSIGGTGKGQLVKEIDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG D IQ R+LN KGPAV R QAD+ Y M++ + + NLD+ EV Sbjct: 69 GGQMGLNIDKTYIQSRMLNTAKGPAVHSLRAQADKFKYHEEMKKTLEDEPNLDIAMDEVV 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E N++ + + + V+L TG +L I++G++ G + L +S Sbjct: 129 EILHEGNVVIGVGTKLGCSFKSKAVILATGVYLNSKIYMGEVAFYEGPNALGYAKYLTDS 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 ++ R KTGTPAR+ +I + Q DE++ PFSFM + I Q C +TRT Sbjct: 189 LVELGLRMRRFKTGTPARVHRDSIDFSVMSLQEGDEKVTPFSFMNENIEKEQEPCYLTRT 248 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 ET ++I++N+K SA+YSG I+S GPRYCPSIEDK+VRF ++ HQ+F+EPEGLNT + Sbjct: 249 TEETQKVILDNLKRSAMYSGVIESTGPRYCPSIEDKVVRFSDKTSHQLFIEPEGLNTKEM 308 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y GIST+LP E+Q +TI GLE I+RP YAIEYD ++P +L +LE K + LF Sbjct: 309 YIQGISTSLPFEVQLDMYKTIKGLENCKIMRPAYAIEYDCVDPTQLKISLEIKGVENLFS 368 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ NGT+GYEEAAAQGL+AGIN+ RK + R+++YIGV++DDL +KG EPYR Sbjct: 369 AGQFNGTSGYEEAAAQGLMAGINAVRKIEGKEPFVLDRSEAYIGVLLDDLVTKGTNEPYR 428 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF--AKYIQEYNFLRSLLKSLVL 483 M TSRAEYR+ LR DNAD RLT G +G + + R +RF K E F R LK+ + Sbjct: 429 MMTSRAEYRLYLRQDNADMRLTQKGYDIGLVKKDRYERFLNKKAAVEKEFER--LKNERV 486 Query: 484 TSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDA-RKFSSLVIERLQ 537 T K ++S ++ G T + YEFL P+ + + L + A S V E+ Sbjct: 487 TPKEVNSL---LEEKGATPIKVGISLYEFLKRPEVTYELLEELGKGAGEDVSREVKEQCV 543 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I + Y Y +Q+ + + K E + + + +YSS+ L E ++KL +KP ++ QAS+ Sbjct: 544 IITKYEGYIEKQLKQIDQFKKLENKKLDEKINYSSIEGLRLEARQKLDDIKPISIGQASR 603 Query: 598 IEGMTPAALNLLLIYIKK 615 I G++PA +++LLIY+++ Sbjct: 604 ISGVSPADISVLLIYLEQ 621 >gi|239630796|ref|ZP_04673827.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301067923|ref|YP_003789946.1| tRNA uridine 5-carboxymethylaminomethyl modification FAD-utilizing enzyme [Lactobacillus casei str. Zhang] gi|239527079|gb|EEQ66080.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300440330|gb|ADK20096.1| tRNA uridine 5-carboxymethylaminomethyl modification FAD-utilizing enzyme [Lactobacillus casei str. Zhang] Length = 633 Score = 492 bits (1267), Expect = e-137, Method: Compositional matrix adjust. Identities = 272/620 (43%), Positives = 374/620 (60%), Gaps = 8/620 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAGCEAA AA++G T L+T + M CNP++GG KG +VREIDA Sbjct: 11 TYDVIVVGAGHAGCEAALAAARMGQKTLLLTISLEMLAFMPCNPSLGGPAKGIVVREIDA 70 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ R+LN KGPAVR R QAD+ Y +M+ I + NLD+ QG Sbjct: 71 LGGEMGKNIDRTYIQMRMLNTGKGPAVRALRAQADKAAYHRSMKHVIENTPNLDLRQGLA 130 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E IV +M R +VVLT GT RG I IG+L +G PS L Sbjct: 131 TEVLVENGQAVGIVAATGAMYRAKSVVLTAGTSSRGKIIIGELMYSSGPNNSLPSIKLSE 190 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNR-QIECGI 242 + + F R KTGTP R++G TI +DKTE+Q D+ FSF T D + + Q+ C + Sbjct: 191 NLEQLGFKLRRFKTGTPPRVNGNTIEFDKTEEQPGDKTPNHFSFTTPDSVYLKDQLSCWM 250 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH+II +N+ + ++SG IK GPRYCPSIEDKIVRF ++ HQ+FLEPEG +T Sbjct: 251 TYTNATTHQIIRDNLDRAPMFSGVIKGVGPRYCPSIEDKIVRFADKPRHQLFLEPEGRDT 310 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 Y ST++PEEIQ + + ++ GLE ++R GYAIEYD I P +L TLETK + Sbjct: 311 SEYYVGDFSTSMPEEIQLKMLHSVAGLEHAELMRAGYAIEYDVIEPWQLKATLETKVVDN 370 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQ+NGT+GYEEAA QG++AGIN+A ++ R+D+YIGVMIDDL +KG E Sbjct: 371 LFTAGQMNGTSGYEEAAGQGIMAGINAALRAQGKGPFTLKRSDAYIGVMIDDLVTKGTNE 430 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYR+ TSRAEYR+ LR DNAD RLTP+G +LG I + R F Q + L + Sbjct: 431 PYRLLTSRAEYRLLLRHDNADLRLTPMGHELGLISDERYAEFLAKRQAIETELNRLNTTR 490 Query: 483 LTSKN----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 L K+ L + + +DG A +FL P+ Q + PD VIE+++I Sbjct: 491 LKPKDVNPWLEAHHYAPLKDGV--LASDFLKRPEIDYQTMAQFLPDNPTLDHRVIEQVEI 548 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + YA Y ++ ++K E + IP +Y+++ L+ E ++KL ++P + QAS+I Sbjct: 549 QIKYAGYIAKEEASVAKLKRLEGKKIPLRINYAAINGLATEARQKLVKIQPETIAQASRI 608 Query: 599 EGMTPAALNLLLIYIKKNTV 618 G+ PA + +L +YI++ + Sbjct: 609 SGVNPADVAILSVYIEQGRI 628 >gi|332881635|ref|ZP_08449283.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332680274|gb|EGJ53223.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 623 Score = 492 bits (1267), Expect = e-137, Method: Compositional matrix adjust. Identities = 265/627 (42%), Positives = 379/627 (60%), Gaps = 25/627 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAGCEAAA +A +GA T L+T + IG MSCNPA+GG+ KG +VREIDAL Sbjct: 5 YDVIVIGGGHAGCEAAAASANMGAQTCLVTMDMNKIGQMSCNPAVGGIAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG V D IQFR+LN KGPA+ PR Q DR + A + + + NL + Q +V Sbjct: 65 GGYMGIVTDRTAIQFRMLNRSKGPAMWSPRAQCDRGKFIWAWREILENTPNLHIWQDQVK 124 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E ++ + + IR V+LTTGTFL G++HIG ++P GR+ + S L S Sbjct: 125 ELLVEHGEVAGVKTYFDVTIRARCVILTTGTFLNGLMHIGHTQLPGGRVAEPASYHLTES 184 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + + GR+KTGTP R+DG+++ +++ E Q + FSFM +Q+ C T Sbjct: 185 IARHGINYGRMKTGTPVRIDGRSVHFEEMEIQEGEHDYHKFSFMGRDRQLKQLPCWTCFT 244 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N E H ++ + S +Y+G I+S GPRYCPSIE K+V F ER+ HQ+FLEPEG +T Sbjct: 245 NPEVHEVLRSGLPDSPLYNGQIQSIGPRYCPSIETKLVTFPERDQHQLFLEPEGESTQEY 304 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG S++LP IQ + ++ IP + I RPGYAIEYDY +P +L+ TLE+K + GLF+ Sbjct: 305 YLNGFSSSLPLHIQIEALKKIPAFRDLAIYRPGYAIEYDYFDPTQLYHTLESKILPGLFM 364 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ+NGTTGYEEA QG+VAGIN+A K + + R +SYIGV+IDDL +KGV EPYR Sbjct: 365 AGQVNGTTGYEEAGGQGIVAGINAALKCSGGEPFVMHRDESYIGVLIDDLVTKGVDEPYR 424 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQ----------KRFAKYIQEYNFLR 475 MFTSRAEYRI LR D+AD RLT ++G R +R + +E++ Sbjct: 425 MFTSRAEYRILLRQDDADARLTERSYQIGLATRERYDHWLSKKDAVERIVSFCKEFSLKP 484 Query: 476 SLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSL--- 531 +L+ S + + L +T + + +E ++ P +++N+ I P +L Sbjct: 485 ALINSGL---EALGTTPLKYGC-----KLFELINRPQITVKNIAEHIAPLKALLDTLTDR 536 Query: 532 ---VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 +IE ++ Y Y R+ I A +++ E I FDY ++ +LS E ++KL + Sbjct: 537 RDEIIEAAEVLIKYHGYIARERIIADKMQRLESIKIKGRFDYKNMNSLSTEARQKLEKIN 596 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIKK 615 P L QA +I G++P+ +N+LL+ + + Sbjct: 597 PETLAQAGRIPGVSPSDINVLLVLLGR 623 >gi|191639863|ref|YP_001989029.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus casei BL23] gi|227533514|ref|ZP_03963563.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA (glucose-inhibited division protein A) [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|190714165|emb|CAQ68171.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA (Glucose-inhibited division protein A) [Lactobacillus casei BL23] gi|227188843|gb|EEI68910.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA (glucose-inhibited division protein A) [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|327383977|gb|AEA55453.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus casei LC2W] gi|327387161|gb|AEA58635.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus casei BD-II] Length = 633 Score = 492 bits (1266), Expect = e-137, Method: Compositional matrix adjust. Identities = 272/620 (43%), Positives = 374/620 (60%), Gaps = 8/620 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAGCEAA AA++G T L+T + M CNP++GG KG +VREIDA Sbjct: 11 TYDVIVVGAGHAGCEAALAAARMGQKTLLLTISLEMLAFMPCNPSLGGPAKGIVVREIDA 70 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ R+LN KGPAVR R QAD+ Y +M+ I + NLD+ QG Sbjct: 71 LGGEMGKNIDRTYIQMRMLNTGKGPAVRALRAQADKAAYHRSMKHVIENTPNLDLRQGLA 130 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E IV +M R +VVLT GT RG I IG+L +G PS L Sbjct: 131 TEVLVENGQAVGIVAATGAMYRAKSVVLTAGTSSRGKIIIGELMYSSGPNNSLPSIKLSE 190 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNR-QIECGI 242 + + F R KTGTP R++G TI +DKTE+Q D+ FSF T D + + Q+ C + Sbjct: 191 NLEQLGFKLRRFKTGTPPRVNGNTIDFDKTEEQPGDKTPNHFSFTTPDSVYLKDQLSCWM 250 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH+II +N+ + ++SG IK GPRYCPSIEDKIVRF ++ HQ+FLEPEG +T Sbjct: 251 TYTNATTHQIIRDNLDRAPMFSGVIKGVGPRYCPSIEDKIVRFADKPRHQLFLEPEGRDT 310 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 Y ST++PEEIQ + + ++ GLE ++R GYAIEYD I P +L TLETK + Sbjct: 311 SEYYVGDFSTSMPEEIQLKMLHSVAGLEHAELMRAGYAIEYDVIEPWQLKATLETKVVDN 370 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQ+NGT+GYEEAA QG++AGIN+A ++ R+D+YIGVMIDDL +KG E Sbjct: 371 LFTAGQMNGTSGYEEAAGQGIMAGINAALRAQGKGPFTLKRSDAYIGVMIDDLVTKGTNE 430 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYR+ TSRAEYR+ LR DNAD RLTP+G +LG I + R F Q + L + Sbjct: 431 PYRLLTSRAEYRLLLRHDNADLRLTPMGHELGLISDERYAEFLAKRQAIETELNRLNTTR 490 Query: 483 LTSKN----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 L K+ L + + +DG A +FL P+ Q + PD VIE+++I Sbjct: 491 LKPKDVNPWLEAHHYAPLKDGV--LASDFLKRPEIDYQTMAQFLPDNPTLDHRVIEQVEI 548 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + YA Y ++ ++K E + IP +Y+++ L+ E ++KL ++P + QAS+I Sbjct: 549 QIKYAGYIAKEEASVAKLKRLEGKKIPLRINYAAINGLATEARQKLVKIQPETIAQASRI 608 Query: 599 EGMTPAALNLLLIYIKKNTV 618 G+ PA + +L +YI++ + Sbjct: 609 SGVNPADVAILSVYIEQGRI 628 >gi|254977336|ref|ZP_05273808.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium difficile QCD-66c26] gi|255094667|ref|ZP_05324145.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium difficile CIP 107932] gi|255316420|ref|ZP_05358003.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium difficile QCD-76w55] gi|255519080|ref|ZP_05386756.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium difficile QCD-97b34] gi|255652263|ref|ZP_05399165.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium difficile QCD-37x79] gi|260685217|ref|YP_003216502.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium difficile CD196] gi|260688876|ref|YP_003220010.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium difficile R20291] gi|306521978|ref|ZP_07408325.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium difficile QCD-32g58] gi|260211380|emb|CBA67034.1| glucose inhibited division protein A [Clostridium difficile CD196] gi|260214893|emb|CBE07698.1| glucose inhibited division protein A [Clostridium difficile R20291] Length = 631 Score = 492 bits (1266), Expect = e-137, Method: Compositional matrix adjust. Identities = 267/618 (43%), Positives = 378/618 (61%), Gaps = 13/618 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAA A++G T +IT +I M CNP+IGG GKG LV+EIDAL Sbjct: 9 YDVIVVGAGHAGCEAALATARMGYKTLIITMSLDSIALMPCNPSIGGTGKGQLVKEIDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG D IQ R+LN KGPAV R QAD+ Y M++ + + NLD+ EV Sbjct: 69 GGQMGLNIDKTYIQSRMLNTAKGPAVHSLRAQADKFKYHEEMKKTLEDEPNLDIAMDEVV 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E N++ + + + V+L TG +L I++G++ G + L +S Sbjct: 129 EILHEGNVVIGVGTKLGCSFKSKAVILATGVYLNSKIYMGEVAFYEGPNALGYAKYLTDS 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 ++ R KTGTPAR+ +I + Q DE++ PFSFM + I +Q C +TRT Sbjct: 189 LVELGLRMRRFKTGTPARVHRDSIDFSVMSLQEGDEKVTPFSFMNENIEKKQEPCYLTRT 248 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 ET ++I++N+K SA+YSG I+S GPRYCPSIEDK+VRF ++ HQ+F+EPEGLNT + Sbjct: 249 TEETQKVILDNLKRSAMYSGVIESTGPRYCPSIEDKVVRFSDKTSHQLFIEPEGLNTKEM 308 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y GIST+LP E+Q +TI GLE I+RP YAIEYD ++P +L +LE K + LF Sbjct: 309 YIQGISTSLPFEVQLDMYKTIKGLENCKIMRPAYAIEYDCVDPTQLKISLEIKGVENLFS 368 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ NGT+GYEEAAAQGL+AGIN+ RK + R+++YIGV++DDL +KG EPYR Sbjct: 369 AGQFNGTSGYEEAAAQGLMAGINAVRKIEGKEPFVLDRSEAYIGVLLDDLVTKGTNEPYR 428 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF--AKYIQEYNFLRSLLKSLVL 483 M TSRAEYR+ LR DNAD RLT G +G + + R +RF K + F R LK+ + Sbjct: 429 MMTSRAEYRLYLRQDNADMRLTQKGYDIGLVKKDRYERFLNKKAAVDKEFER--LKNERV 486 Query: 484 TSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDA-RKFSSLVIERLQ 537 T K ++S ++ G T + YEFL P+ + + L + A S V E+ Sbjct: 487 TPKEVNSL---LEEKGATPIKVGISLYEFLKRPEVTYELLEELGKGAGEDVSREVKEQCV 543 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I + Y Y +Q+ + + K E + + + +YSS+ L E ++KL +KP ++ QAS+ Sbjct: 544 IITKYEGYIEKQLKQIDQFKKLENKKLDEKINYSSIEGLRLEARQKLDDIKPISIGQASR 603 Query: 598 IEGMTPAALNLLLIYIKK 615 I G++PA +++LLIY+++ Sbjct: 604 ISGVSPADISVLLIYLEQ 621 >gi|224418682|ref|ZP_03656688.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Helicobacter canadensis MIT 98-5491] gi|253826781|ref|ZP_04869666.1| glucose-inhibited division protein A [Helicobacter canadensis MIT 98-5491] gi|313142204|ref|ZP_07804397.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Helicobacter canadensis MIT 98-5491] gi|253510187|gb|EES88846.1| glucose-inhibited division protein A [Helicobacter canadensis MIT 98-5491] gi|313131235|gb|EFR48852.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Helicobacter canadensis MIT 98-5491] Length = 639 Score = 492 bits (1266), Expect = e-137, Method: Compositional matrix adjust. Identities = 283/639 (44%), Positives = 386/639 (60%), Gaps = 29/639 (4%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIGGGHAG EA+ V+AK G T L+T IG+ SCNPA+GGLGKGHLV+E+DA Sbjct: 2 TYDVIVIGGGHAGIEASIVSAKRGCKTLLLTMLVEQIGAASCNPAVGGLGKGHLVKEVDA 61 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ-ENLDVIQGE 123 L G+MG + D +GIQFR LN KGPAVRG R Q D + Y++ + REI Q +NL+V Q Sbjct: 62 LGGVMGYITDKSGIQFRTLNASKGPAVRGTRAQIDMDRYKI-IAREICYQTKNLEVSQQI 120 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 E N I + + V+LTTGTFLRG IHIG+ GR G+ P+ L Sbjct: 121 AESLLLENNCIVGVKTNIGKVYHAKKVILTTGTFLRGKIHIGENISNNGRAGEPPAMELG 180 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK------ITNRQ 237 + + GRLKTGT AR+ +I ++ EK + D FS T K + Q Sbjct: 181 ECLRELGLEVGRLKTGTCARIKASSINFEALEKHYGDMPPPFFSKQTQKELGNKEFSPTQ 240 Query: 238 IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 + C +T TN +TH II N + ++ G I+ GPRYCPSIEDK+ RF ++ HQ+FLEP Sbjct: 241 LPCYVTYTNAKTHEIIRNNFHRAPMFIGQIEGIGPRYCPSIEDKVNRFSDKERHQLFLEP 300 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 + L + Y NG++T+LP ++Q + I +I GLE I+R GYAIEYDYINP EL TLET Sbjct: 301 QTLEANEYYINGLTTSLPFDVQEEMIHSIEGLENAEIVRYGYAIEYDYINPTELKHTLET 360 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 KKI L+ AGQINGTTGYEEAAAQG+ AGIN++ + I R ++YIGVMIDDL + Sbjct: 361 KKIKNLYCAGQINGTTGYEEAAAQGIFAGINASLSVQGKEEITLKRNEAYIGVMIDDLVT 420 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL 477 KG EPYRMF+SRAEYR+ LR NA RL + KLG + +++ + +Q+ + ++ Sbjct: 421 KGTKEPYRMFSSRAEYRLLLREGNAIFRLGELAYKLGLM---QEEEYQALLQDKSDIQKG 477 Query: 478 LKSLVLTSKNLSSTSISF-------KQDGKT--RTAYEFLSYPDFSIQNLFSICPDA-RK 527 L+ L T+ + ++F K KT RT S+ + + I P K Sbjct: 478 LQWLDSTALTPTQEILTFLDSIQEEKISDKTIWRTIVGRRSFDLPKLLKIGEIIPTPFEK 537 Query: 528 FSSLVIERLQIESSYAAYTGRQ--MIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 FS +E + +E+ YA Y +Q +I+ + K IP DF + ++P LS E+ EKL Sbjct: 538 FSHRALEEILVEAKYANYIQKQQSLIDNMDKMLSIK--IPADFSFDTIPGLSLEVVEKLK 595 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYI----KKNTVKL 620 P +L +AS+I G+TPA+L +L +YI KK +++L Sbjct: 596 KFTPKSLFEASEISGVTPASLEVLQLYIHLYHKKKSLEL 634 >gi|283954746|ref|ZP_06372262.1| glucose inhibited division protein A [Campylobacter jejuni subsp. jejuni 414] gi|283793586|gb|EFC32339.1| glucose inhibited division protein A [Campylobacter jejuni subsp. jejuni 414] Length = 619 Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust. Identities = 274/618 (44%), Positives = 374/618 (60%), Gaps = 15/618 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EA+A AA++G T L+T IG+ SCNPAIGGL KGHLV+E+DA+ Sbjct: 2 FDVIVIGGGHAGVEASAAAARMGKKTLLLTTLIEQIGAASCNPAIGGLAKGHLVKELDAM 61 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLMG + D AGIQFR+LN KG AV+G R Q D + YR+ + ++L NL++ Q + + Sbjct: 62 GGLMGEITDEAGIQFRILNESKGIAVQGSRAQIDMDKYRIIARNKLLKLSNLEISQEQAS 121 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + + V+LTTGTFL G+IH+G+ K+ AGR+G+ S +L N Sbjct: 122 TLIIENDEVKGVKTNLENTYFAKKVILTTGTFLNGLIHVGENKLQAGRVGELASVNLGNY 181 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 D GRLKTGT R+D K+I + E Q D FSF + Q+ C I RT Sbjct: 182 LQTLDLKMGRLKTGTCPRVDAKSIDFSVLEIQDGDVNPKAFSFRSRNFNPTQLPCYIART 241 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N TH II N + +++G I+ GPRYCPSIEDKI RF ++ H +F+EP+ ++ Sbjct: 242 NTTTHEIIKSNFYRAPLFTGQIEGVGPRYCPSIEDKINRFSDKESHHLFIEPQTIDATEY 301 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG ST+LP E+Q Q + +I G E I R GYAIEYDYI P EL TLE KKI L+ Sbjct: 302 YINGFSTSLPYEVQAQMLHSIKGFENAKITRFGYAIEYDYIEPTELKHTLELKKIKNLYC 361 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAAAQGL+AGIN++ + + + R ++YIGV+IDDL KG EPYR Sbjct: 362 AGQINGTTGYEEAAAQGLMAGINASLSIDTKEPLILRRDEAYIGVLIDDLVVKGTKEPYR 421 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL-VLT 484 MFTSRAE+R+ LR +NA RL G LG + E+ FA YIQ N +L K L L Sbjct: 422 MFTSRAEFRLFLREENAILRLGKYGYDLGLLSEQ---DFA-YIQ--NIANNLQKGLEFLL 475 Query: 485 SKNLSST--------SISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 SK + S+ + + ++ F+++ L + P + + + Sbjct: 476 SKKFTPNNQNNAFLESLGEDKISSIVNLQKIVARASFNVEKLKKLNPMFEAMDNYSLREI 535 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 E+ Y Y Q + +++K + IP++FD+ S+ LSNE+ EKL+ KP + AS Sbjct: 536 LNEAKYYHYISMQKAQVEKMKNLSELKIPENFDFKSVSGLSNEVIEKLNHHKPPTIFAAS 595 Query: 597 KIEGMTPAALNLLLIYIK 614 +I G+TPAAL++L IYIK Sbjct: 596 QISGITPAALDILQIYIK 613 >gi|282898664|ref|ZP_06306652.1| Glucose-inhibited division protein A subfamily [Cylindrospermopsis raciborskii CS-505] gi|281196532|gb|EFA71441.1| Glucose-inhibited division protein A subfamily [Cylindrospermopsis raciborskii CS-505] Length = 648 Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust. Identities = 268/625 (42%), Positives = 368/625 (58%), Gaps = 25/625 (4%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAGCEAA AA+LG T L+T I CNPA+GG K L E+DA Sbjct: 24 AYDVIVVGAGHAGCEAALAAARLGCPTLLLTLNLDKIAWQPCNPAVGGPAKSQLTHEVDA 83 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G +G++AD +Q RVLN +GPAV R Q D+ Y M+ + +QENL + + V Sbjct: 84 LGGEIGKMADRTYLQKRVLNSSRGPAVWALRAQTDKREYAAVMKGIVENQENLTIREAMV 143 Query: 125 AGFNTEKNI-ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 KN I + C V+LTTGTFL G I +G + AGR G+ + L Sbjct: 144 TDLVLGKNDEIIGVETYFGVAFACKAVILTTGTFLGGRIWVGNKSMEAGRAGEFAAVGLT 203 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + + F+TGRLKTGTPAR+D +++ + K E Q D + FSF + QI C + Sbjct: 204 TTLHRLGFETGRLKTGTPARVDKRSVDYSKMEIQPGDGEVRWFSFDPQVWVEKEQIPCYM 263 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 TRT ETHR+I EN+ S +Y G + + GPRYCPSIEDKIVRF ++ HQIF+EPEG + Sbjct: 264 TRTTPETHRLIQENLGLSPVYGGWVDAKGPRYCPSIEDKIVRFADKESHQIFIEPEGRDI 323 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +Y G ST LPE +Q +R++PGLEK ++RP YA+EYDY+ + +P+L TKKI G Sbjct: 324 PELYIQGFSTGLPETLQILMLRSLPGLEKCVMLRPAYAVEYDYLPATQCYPSLMTKKIEG 383 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGLVAGIN+ + + + + F R SYIG +IDDL +K + E Sbjct: 384 LFCAGQINGTTGYEEAAAQGLVAGINAVQFAQGREMVIFPREQSYIGTLIDDLCTKDLRE 443 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRM TSR+EYR+ LR DNAD R+TP+G +G I +RR +N + ++ Sbjct: 444 PYRMLTSRSEYRLLLRSDNADQRMTPLGRAIGLIDDRR----------WNLFTRKQEQII 493 Query: 483 LTSKNLSSTSISFKQD-GKTRTAY------------EFLSYPDFSIQNLFSICPDARKFS 529 + L ST I +D G+ T + + L P+ +L Sbjct: 494 GEKERLHSTRIKEHEDIGRLITQHTQQVIKGSITLADLLRRPEIHYSDLERYGLGNPHLH 553 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 E +I+ Y+ Y RQ + +I + R +P + DY+S+ LS E +EKL+ +KP Sbjct: 554 GAEKEGAEIDIKYSGYLARQQNQIDQIARQANRHLPPNLDYNSITTLSKEAREKLTTVKP 613 Query: 590 FNLLQASKIEGMTPAALNLLLIYIK 614 + QAS+I G+ PA +N LL+Y++ Sbjct: 614 LTVGQASRIGGVNPADINALLVYLE 638 >gi|41058565|gb|AAR99265.1| glucose-inhibited division protein A [Candidatus Blochmannia schaefferi] Length = 602 Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust. Identities = 274/600 (45%), Positives = 376/600 (62%), Gaps = 25/600 (4%) Query: 33 LITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVR 92 LITH T+G MSCNPAIGG+GKGHLV+EIDA+ G+M D +GIQFR++N KG AVR Sbjct: 1 LITHNIDTLGQMSCNPAIGGIGKGHLVKEIDAMGGIMAHAIDRSGIQFRIINNSKGAAVR 60 Query: 93 GPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSM-IRCSTVV 151 R QAD+ LYR ++ + E L ++Q V KN + +++ + +R +VV Sbjct: 61 ATRAQADKILYRQMVRNTLEYMECLLIMQASVEDLIIHKNKVCGVIIPKMGIKLRALSVV 120 Query: 152 LTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMK-FDFDTGRLKTGTPARLDGKTII 210 LTTGTFL G IHIG GR GD +SL ++ +K +LKTGT R+ K I Sbjct: 121 LTTGTFLNGKIHIGFNNFMGGRAGDIGYSSLLSTRLKELSLRVSQLKTGTSPRVHSKGIN 180 Query: 211 WDKTEKQFADERLIPFSFM-TDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKS 269 +D Q +D + FSFM + + +QI C IT TN +TH II N+ S IYSG IK Sbjct: 181 FDCLCAQNSDNPVPVFSFMGSVQQHPKQIPCYITHTNNKTHEIIKSNLHRSPIYSGVIKG 240 Query: 270 YGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGL 329 PRYCPSIEDKI+RF +R+ HQ+FLEPEGL T +Y NGIST+LP + Q Q I++I GL Sbjct: 241 VAPRYCPSIEDKIIRFSDRDSHQVFLEPEGLTTPEIYLNGISTSLPFDTQIQIIKSIKGL 300 Query: 330 EKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINS 389 E +IIRPGYA+EYD+ +P++L TLE+K ISGLF +GQINGTTGYEEAAAQGL+AGIN+ Sbjct: 301 ENAHIIRPGYAVEYDFFDPRDLKLTLESKLISGLFFSGQINGTTGYEEAAAQGLLAGINA 360 Query: 390 ARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPI 449 AR + + R +Y+GV++DDL + G+ EPYRM SRAEYR+SLR DNAD RLT I Sbjct: 361 ARFAQNKEGWYPRRDQAYLGVLVDDLCTHGITEPYRMXXSRAEYRLSLREDNADLRLTAI 420 Query: 450 GMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL--------VLTSKNLSSTSISFKQDGKT 501 KLG I E R + F + + R L++ V+ +L +T + + G+ Sbjct: 421 ARKLGLIDESRWEFFCRKQENIERERQRLRNTYIFPHSVDVVQLNSLLNTPLKHRISGE- 479 Query: 502 RTAYEFLSYPDFSIQNLFSICPDARKFSSLVIE-----RLQIESSYAAYTGRQMIEAKEI 556 E L P+ + L + + FSS +++ +++++ Y Y RQ E + Sbjct: 480 ----ELLKRPEINYIQLLQL----QTFSSPILDSQVFCQIELQIKYEGYIRRQQEEIERS 531 Query: 557 KFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKN 616 F E L+P + D+S + LS E+ EKL+ KP ++ QAS+I G+TPAA++ LL+++KKN Sbjct: 532 IFNENVLLPTNMDFSIVSGLSKEVIEKLNDCKPCSVGQASRISGVTPAAISNLLVWLKKN 591 >gi|160946572|ref|ZP_02093775.1| hypothetical protein PEPMIC_00530 [Parvimonas micra ATCC 33270] gi|158446956|gb|EDP23951.1| hypothetical protein PEPMIC_00530 [Parvimonas micra ATCC 33270] Length = 628 Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust. Identities = 271/621 (43%), Positives = 381/621 (61%), Gaps = 12/621 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 I+ YDV+VIG GHAGCEA +A+LG TA++T ++ M CNP IGG GKGHLVRE Sbjct: 5 IDEKYDVVVIGAGHAGCEAGLASARLGLKTAILTISMDSVADMPCNPNIGGTGKGHLVRE 64 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M D IQ R+LN KGPAV R QAD+++Y M++ + +++N+D+IQ Sbjct: 65 IDALGGEMAINIDKTFIQSRMLNTSKGPAVHSLRVQADKKMYHTEMKKVLENEKNIDLIQ 124 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 EV TE N I+ ++ N + V++ TGT+L+ +I IG+ +G S Sbjct: 125 AEVKEILTENNEITGVLTTSNEIFPAKAVIICTGTYLKSMILIGENCYESGPNNWKCSTY 184 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KITNRQIE 239 L +S R KTGTPAR+ +I + K + Q D+ +IPFSFM + I N + + Sbjct: 185 LSDSLRNLGIPLRRFKTGTPARVHRDSIDYSKMDIQKGDDNIIPFSFMNEGKDIGNHKED 244 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +T T LET +II +N+ S +Y+G +K GPRYCPSIEDKIVRF E++ HQ+F+EPEG Sbjct: 245 CFLTYTTLETKKIIEQNLHRSPMYAGIVKGVGPRYCPSIEDKIVRFNEKDEHQVFIEPEG 304 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L+T +Y G+S+ LP E+Q Q ++I GLE V I+RP Y IEYD I+P L TLE K Sbjct: 305 LDTSEMYVQGVSSTLPLEVQKQMYKSILGLENVKIMRPAYGIEYDCIDPTILRATLEHKD 364 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I LF AGQING++GYEEAA+QG++AGINSA + +R+D+YIGV+IDDL +KG Sbjct: 365 IKNLFFAGQINGSSGYEEAASQGIIAGINSAMNILGKEPFVLTRSDAYIGVLIDDLITKG 424 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLG-CIGERRQKRFAKYIQEYNFLRSLL 478 EPYRM TSR EYR+SLR DNAD RLT + +G ER +K K N + L Sbjct: 425 TDEPYRMMTSRTEYRLSLRQDNADLRLTEMSYNIGLATKERYEKCLNKKTLIENEIER-L 483 Query: 479 KSLVLTSKNLSSTSISFKQDGKTRTA---YEFLSYPDFSIQNLFSICPDARKFSSLVIER 535 KS +LT K ++ ++ K +TA Y+ + P+ + + + + + Sbjct: 484 KSSILTPKENTNNALEALGSMKLKTAVSLYDLIKRPELDYEIIKDLDTTREPLDREIKMQ 543 Query: 536 LQIESSYAAYTGR--QMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 +Q Y Y + Q IEA + K E K+L ++ DY+SL L E +KL+ +P + Sbjct: 544 VQTMIKYEGYIEKQSQQIEAFK-KLENKKL--ENIDYNSLSGLRIEAVQKLAKFRPETVG 600 Query: 594 QASKIEGMTPAALNLLLIYIK 614 QAS+I G++PA +N+LLI+++ Sbjct: 601 QASRISGVSPADINVLLIHLE 621 >gi|83591334|ref|YP_431343.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Moorella thermoacetica ATCC 39073] gi|123725614|sp|Q2RFI9|MNMG_MOOTA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|83574248|gb|ABC20800.1| glucose inhibited division protein A [Moorella thermoacetica ATCC 39073] Length = 630 Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust. Identities = 271/618 (43%), Positives = 379/618 (61%), Gaps = 9/618 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIG GHAGCEAA AAKLG T ++T +I M CNP+IGG KGHLVREIDA Sbjct: 6 NYDVIVIGAGHAGCEAALAAAKLGCRTLMLTISLESIAMMPCNPSIGGPAKGHLVREIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G+MG D + IQ R LN KGPAVR R QAD++LY+ M + QE+LDV Q EV Sbjct: 66 LGGIMGLNIDRSRIQIRRLNSGKGPAVRALRAQADKKLYQREMTLTLERQEHLDVKQAEV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 TE + ++ + + C +VLTTGT+LRG I IG++ G G P+ L Sbjct: 126 IRILTESGRVKGVLTRTGAYFACRAIVLTTGTYLRGRIIIGEVAYAGGPNGQFPAIELAA 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S + GR KTGTP R+ G++I WDK +Q D + FSF + + C +T Sbjct: 186 SLKELGLRMGRFKTGTPPRVSGRSINWDKMTEQPGDPGPLRFSFWEEGPERPNVSCWLTH 245 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II +N+ + ++SG I+ GPRYCPSIEDK+VRF ++ GHQIFLEPEG+ T+ Sbjct: 246 TNTTTHNIIKDNLHRAPLFSGLIEGKGPRYCPSIEDKVVRFADKPGHQIFLEPEGMGTEE 305 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 Y G+ST+LPE++Q + ++PGLE+ ++RPGYAIEYDYI+P +L +LE K I+GLF Sbjct: 306 WYVQGLSTSLPEDVQLAVLHSVPGLEQAEMMRPGYAIEYDYIDPTQLKASLECKHIAGLF 365 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAAAQGLVAGIN+AR + + + R +YIGV+IDDL ++GV EPY Sbjct: 366 TAGQINGTSGYEEAAAQGLVAGINAARLVREQEPLILRRDQAYIGVLIDDLVTRGVTEPY 425 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAE+R+ LR DNAD RL IG ++G + E+R ++ + N L + Sbjct: 426 RLLTSRAEHRLLLREDNADLRLGRIGYEIGLLDEQRFRKLEAKEKAINDGLVYLGKQHVG 485 Query: 485 SKNLSSTSISFKQDGK----TRTAYEFLSYPDFSIQNLFS--ICPDARKFSSLVIERLQI 538 N I T + + + P Q+L + + P+ + +++ Sbjct: 486 GNNPKIQEIIVACGEPPLKGTTSLKDLMRRPRIKYQDLAAAGLVPE---LPPEIAAEIEM 542 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 Y Y ++ I+ + + E R++P D +YS + LS E + L +KP +L QA +I Sbjct: 543 MVKYEGYIAKEKIQVERLAKLEARVLPADLNYSEIRGLSRESIDHLERVKPRSLGQALRI 602 Query: 599 EGMTPAALNLLLIYIKKN 616 G+TPA +++LL+Y+++ Sbjct: 603 PGVTPADISVLLVYLEQK 620 >gi|149278193|ref|ZP_01884331.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pedobacter sp. BAL39] gi|149230959|gb|EDM36340.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pedobacter sp. BAL39] Length = 620 Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust. Identities = 279/623 (44%), Positives = 382/623 (61%), Gaps = 16/623 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIV+G GHAGCEAAA AA LG+S LIT TI MSCNPA+GG+ KG +VREID Sbjct: 3 KEYDVIVVGAGHAGCEAAAAAANLGSSVLLITMNMETIAQMSCNPAMGGVAKGQIVREID 62 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADR----ELYRLAMQREILSQENLDV 119 A+ G G ++D +QFR+LN+ KGPA+ PR Q DR E +RLA++R N+D Sbjct: 63 AMGGYSGIISDKTTLQFRMLNLSKGPAMWSPRAQNDRKRFAEEWRLALER----TPNVDF 118 Query: 120 IQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 Q V+ + N ++ + I +VVLT GTFL G+IHIG+ K GR + + Sbjct: 119 WQDMVSSLVIKNNTVTGVKTSLGIEISGKSVVLTNGTFLNGLIHIGEKKFGGGRTAERAA 178 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIE 239 + F+ GR+KTGTP R+DG+++ + E+Q+ DE FS+ Q Sbjct: 179 TGITEQLTTLGFEAGRMKTGTPPRVDGRSLNYSLMEEQWGDENPGRFSYTNVARPTEQRC 238 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN + H + E + S +++G IK GPRYCPSIEDKI RF ER HQIF+EPEG Sbjct: 239 CWITYTNADVHETLKEGFEKSPMFTGRIKGLGPRYCPSIEDKINRFAERERHQIFVEPEG 298 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 NT +Y NG ST+LPE++Q++ + IPG E + RPGYAIEYDY P +L TLETK Sbjct: 299 WNTCEIYVNGFSTSLPEDVQYRALTQIPGFENAKMFRPGYAIEYDYFPPTQLGLTLETKL 358 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I+ LF AGQINGTTGYEEAA+QG +AGIN+ +K N L + R++SYIGV+IDDL +KG Sbjct: 359 INNLFFAGQINGTTGYEEAASQGFIAGINAHQKVNDLHELIMKRSESYIGVLIDDLVTKG 418 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAE+R+ LR DNAD RL+PIG +LG I + R + I + + + K Sbjct: 419 TEEPYRMFTSRAEHRLLLRQDNADIRLSPIGHQLGLISDERLDLVKQKISNSDAIVTFSK 478 Query: 480 --SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPD----ARKFSSLVI 533 + ++ N + + L P +I +L ++ +F I Sbjct: 479 KQGIDMSEANDKLAELGTTALNQNVKIVSLLGRPQVNINDLRTMSKPFDHYLEQFDQETI 538 Query: 534 ERLQIESSYAAYTGR-QMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 E+ +I+ Y +Y + Q I K K E+K + P DFDYS L +LS E +EKL +KP L Sbjct: 539 EQAEIKIKYESYFEKEQEIVNKMQKMEDKDINP-DFDYSQLVSLSKEAREKLLKIKPRTL 597 Query: 593 LQASKIEGMTPAALNLLLIYIKK 615 QAS+I G++P+ +++L+++I K Sbjct: 598 GQASRISGVSPSDISVLMVHISK 620 >gi|229551113|ref|ZP_04439838.1| glucose-inhibited division protein A [Lactobacillus rhamnosus LMS2-1] gi|229315505|gb|EEN81478.1| glucose-inhibited division protein A [Lactobacillus rhamnosus LMS2-1] Length = 639 Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust. Identities = 271/620 (43%), Positives = 374/620 (60%), Gaps = 8/620 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAGCEAA AA++G T L+T + M CNP++GG KG +VREIDA Sbjct: 17 TYDVIVVGAGHAGCEAALAAARMGEKTLLLTISLEMLAFMPCNPSLGGPAKGIVVREIDA 76 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ R+LN KGPAVR R QAD+ Y +M+ I +LD+ QG Sbjct: 77 LGGEMGKNIDRTYIQMRMLNTGKGPAVRALRAQADKAAYHRSMKHVIEDTPHLDLRQGLA 136 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E IV ++ R ++VLT GT RG I IG+L +G PS L Sbjct: 137 TEVLVEDGKAVGIVAATGAIYRAKSIVLTAGTSSRGKIIIGELMYSSGPNNSLPSIKLSE 196 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNR-QIECGI 242 + + F R KTGTP R++G TI + KTE+Q D+ FSF T D + + Q+ C + Sbjct: 197 NLEQLGFKLRRFKTGTPPRVNGNTIDFSKTEEQPGDKTPNHFSFTTPDSVYLKDQLSCWM 256 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH+II EN+ + ++SG IK GPRYCPSIEDKIVRF ++ HQ+FLEPEG +T Sbjct: 257 TYTNATTHQIIRENLDRAPMFSGVIKGVGPRYCPSIEDKIVRFADKPRHQLFLEPEGRDT 316 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 Y ST++PEEIQ + + ++ GLE ++R GYAIEYD I P +L TLETK + Sbjct: 317 SEYYVGDFSTSMPEEIQLKMLHSVAGLEHAELMRAGYAIEYDVIEPWQLKATLETKVVRN 376 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQ+NGT+GYEEAA QG+VAGIN+AR++ R+D+YIGVMIDDL +KG E Sbjct: 377 LYTAGQMNGTSGYEEAAGQGIVAGINAARRAQGKGPFTLKRSDAYIGVMIDDLVTKGTNE 436 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYR+ TSRAEYR+ LR DNAD RLTP+G +LG I ++R F Q + L+ Sbjct: 437 PYRLLTSRAEYRLLLRHDNADLRLTPMGHELGLISDQRYADFLAKRQAITDELARLEHTR 496 Query: 483 LTSKN----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 L K+ L + + +DG A +FL P+ + Q L P+ VIE+++I Sbjct: 497 LKPKDVNPWLEAHHFAPLKDGV--LASDFLKRPEINYQTLAQFLPETPTLDHRVIEQVEI 554 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + YA Y ++ ++K E + IP DY ++ L+ E ++KL ++P + QAS+I Sbjct: 555 QIKYAGYIAKEEASVAKLKRLEGKKIPARIDYEAINGLATEARQKLVKIQPETIAQASRI 614 Query: 599 EGMTPAALNLLLIYIKKNTV 618 G+ PA + +L +YI++ + Sbjct: 615 SGVNPADVAILSVYIEQGRI 634 >gi|193211683|ref|YP_001997636.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Chlorobaculum parvum NCIB 8327] gi|193085160|gb|ACF10436.1| glucose inhibited division protein A [Chlorobaculum parvum NCIB 8327] Length = 621 Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust. Identities = 266/625 (42%), Positives = 370/625 (59%), Gaps = 20/625 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAA A+ G LIT S + MSCNPAIGG+ KG + REIDAL Sbjct: 2 YDVIVVGAGHAGCEAALAVARSGLECLLITSDLSAVARMSCNPAIGGVAKGQMTREIDAL 61 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + DA GIQFR+LN KG A+ PR QAD+ LY L M+ I + N+D++Q V Sbjct: 62 GGEMAKAIDATGIQFRLLNRSKGAALHSPRAQADKTLYSLYMRSVIEHEPNIDILQDTVI 121 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGR-MGDSPSNSLFN 184 G + K S+ + I+ +L GTFL G+IHIG P GR + + P L Sbjct: 122 GVSAPKGTFKSVTVMSGRAIKAKAAILACGTFLNGLIHIGMDHYPGGRSVAEPPVTGLTE 181 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGIT 243 S F GRLKTGTP R+D +++ +D +Q D+ + FSF T+ + +R + C +T Sbjct: 182 SLAALGFSFGRLKTGTPPRIDSRSVNYDLVTEQPGDDDPVAFSFSTESVAHRNLVCCHLT 241 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 +T +TH I+ S +++G ++ GPRYCPSIEDKI RF E+ IFLEPEG +T Sbjct: 242 KTTEKTHEILRSGFDRSPLFTGKVQGVGPRYCPSIEDKIYRFPEKLSQHIFLEPEGADTI 301 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y NG ST+LPE+IQ +R+IPGLE+ +IRPGYAIEYDY +P ++ T+ET+ + L Sbjct: 302 EMYVNGFSTSLPEDIQLAGLRSIPGLEEAKMIRPGYAIEYDYFHPWQIRSTMETRPVENL 361 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGT+GYEEAA QGL+AGIN+ RK + I R +YIGV+IDDL +K EP Sbjct: 362 YFAGQINGTSGYEEAAGQGLMAGINAVRKILGKEPIVLGRDQAYIGVLIDDLITKETNEP 421 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTS AE+R+ LR DNAD RL+ +G + G + E + ++ LKSL L Sbjct: 422 YRMFTSSAEHRLILRHDNADLRLSTVGYECGLVSEHQLEKTKAITDLAGECIERLKSLKL 481 Query: 484 TSKNLSS--TSISFKQDGKTRTAYEFLSYPDFSIQNLF-----------SICPDARKFSS 530 ++ + ++ +A L P + +L C D R Sbjct: 482 KPDEINQLLANKGAQELKSPASALSVLKRPGIELADLLRHSAAVQAAIGETCEDVR---- 537 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 V E++QIE Y Y R+ + A+ I + IP +F Y SL +LSNE +EKL +P Sbjct: 538 -VAEQVQIEIKYEGYIKREKLVAERIARLDALHIPDNFKYESLNSLSNEGREKLIKHRPS 596 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 + QAS+I G++P+ +++L+I + + Sbjct: 597 TIGQASRILGVSPSDVSILMIRLGR 621 >gi|258541096|ref|YP_003175595.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus rhamnosus Lc 705] gi|257152772|emb|CAR91744.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG/GidA [Lactobacillus rhamnosus Lc 705] Length = 633 Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust. Identities = 271/620 (43%), Positives = 374/620 (60%), Gaps = 8/620 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAGCEAA AA++G T L+T + M CNP++GG KG +VREIDA Sbjct: 11 TYDVIVVGAGHAGCEAALAAARMGEKTLLLTISLEMLAFMPCNPSLGGPAKGIVVREIDA 70 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ R+LN KGPAVR R QAD+ Y +M+ I +LD+ QG Sbjct: 71 LGGEMGKNIDRTYIQMRMLNTGKGPAVRALRAQADKAAYHRSMKHVIEDTPHLDLRQGLA 130 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E IV ++ R ++VLT GT RG I IG+L +G PS L Sbjct: 131 TEVLVEDGKAVGIVAATGAIYRAKSIVLTAGTSSRGKIIIGELMYSSGPNNSLPSIKLSE 190 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNR-QIECGI 242 + + F R KTGTP R++G TI + KTE+Q D+ FSF T D + + Q+ C + Sbjct: 191 NLEQLGFKLRRFKTGTPPRVNGNTIDFSKTEEQPGDKTPNHFSFTTPDSVYLKDQLSCWM 250 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH+II EN+ + ++SG IK GPRYCPSIEDKIVRF ++ HQ+FLEPEG +T Sbjct: 251 TYTNATTHQIIRENLDRAPMFSGVIKGVGPRYCPSIEDKIVRFADKPRHQLFLEPEGRDT 310 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 Y ST++PEEIQ + + ++ GLE ++R GYAIEYD I P +L TLETK + Sbjct: 311 SEYYVGDFSTSMPEEIQLKMLHSVAGLEHAELMRAGYAIEYDVIEPWQLKATLETKVVRN 370 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQ+NGT+GYEEAA QG+VAGIN+AR++ R+D+YIGVMIDDL +KG E Sbjct: 371 LYTAGQMNGTSGYEEAAGQGIVAGINAARRAQGKGPFTLKRSDAYIGVMIDDLVTKGTNE 430 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYR+ TSRAEYR+ LR DNAD RLTP+G +LG I ++R F Q + L+ Sbjct: 431 PYRLLTSRAEYRLLLRHDNADLRLTPMGHELGLISDQRYADFLAKRQAITDELARLEHTR 490 Query: 483 LTSKN----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 L K+ L + + +DG A +FL P+ + Q L P+ VIE+++I Sbjct: 491 LKPKDVNPWLEAHHFAPLKDGV--LASDFLKRPEINYQTLAQFLPETPTLDHRVIEQVEI 548 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + YA Y ++ ++K E + IP DY ++ L+ E ++KL ++P + QAS+I Sbjct: 549 QIKYAGYIAKEEASVAKLKRLEGKKIPARIDYEAINGLATEARQKLVKIQPETIAQASRI 608 Query: 599 EGMTPAALNLLLIYIKKNTV 618 G+ PA + +L +YI++ + Sbjct: 609 SGVNPADVAILSVYIEQGRI 628 >gi|261878875|ref|ZP_06005302.1| glucose-inhibited division protein A [Prevotella bergensis DSM 17361] gi|270334515|gb|EFA45301.1| glucose-inhibited division protein A [Prevotella bergensis DSM 17361] Length = 624 Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust. Identities = 267/626 (42%), Positives = 377/626 (60%), Gaps = 13/626 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M + +YDVIVIGGGHAGCEAA AA LGA T L+T + I MSCNPA+GG+ KG LVR Sbjct: 1 MKDFNYDVIVIGGGHAGCEAATAAANLGAKTCLVTMDMNKIAQMSCNPAVGGIAKGQLVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G MG+V DA IQFR+LN KGPAV PR Q DRE Y + +R + NLD+ Sbjct: 61 EIDALGGFMGKVTDATAIQFRMLNKGKGPAVWSPRAQCDREKYIVEWRRVLDRTPNLDIW 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q + T + IR VV+T GTFL G++HIG+ + P GR + Sbjct: 121 QDQADELLTVHGEAVGVRTVWGVEIRAKAVVVTAGTFLNGLMHIGRKQYPGGRCAEPAVL 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 S ++ GR+KTGTP RLD ++I ++ TE+Q + FS++ + T +Q+ C Sbjct: 181 HFTESITRWGVRAGRMKTGTPVRLDKRSIHFEDTEEQPGENDFHKFSYLWSQPTLKQLPC 240 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 TN + H I+ E+I +S +Y+G I+S GPRYCPSIE K+V F +R+ H +F+EPEG Sbjct: 241 WTCSTNSDAHEILREDIANSPLYNGQIESIGPRYCPSIETKLVTFPDRDSHPLFIEPEGE 300 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 +T+ +Y NG S+++P E Q + + IP L + I RPGYAIEYDY +P +L +LE+K I Sbjct: 301 DTNEMYLNGFSSSMPLETQLKALHQIPALREAKIYRPGYAIEYDYFDPTQLKHSLESKII 360 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF+AGQ+NGTTGYEEA AQG+VAG+N+A + + R +SYIGV+IDDLT+KGV Sbjct: 361 KGLFMAGQVNGTTGYEEAGAQGIVAGVNAALHCSGNEPFVMRRDESYIGVLIDDLTTKGV 420 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYRI LR D+AD RLT +LG R + + + + + K+ Sbjct: 421 DEPYRMFTSRAEYRILLRQDDADARLTEKAYELGLASRERLDWWLEKKEAIDRMIQYCKN 480 Query: 481 LVLTSKNLSST----SISFKQDGKTRTAYEFLSYPDFSIQNLFSICP-------DARKFS 529 + K ++S+ I + G T + + P +++ L I P R + Sbjct: 481 TSVKPKEINSSLEALGIPPLRMGCKLT--DLIGRPQLNMKVLAEIIPGLKEQMESPRNRA 538 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 ++E ++I Y Y R+ + A ++ E I F+Y L +S E ++KL + P Sbjct: 539 EEIVEGVEIRIKYRGYIEREKLIADKMHRLENIRIKGKFNYQDLKEISTEGRQKLERIDP 598 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKK 615 L QAS+I G++P+ +N+LL+ + + Sbjct: 599 ETLGQASRIPGVSPSDINVLLVLMGR 624 >gi|227893843|ref|ZP_04011648.1| glucose-inhibited division protein A [Lactobacillus ultunensis DSM 16047] gi|227864332|gb|EEJ71753.1| glucose-inhibited division protein A [Lactobacillus ultunensis DSM 16047] Length = 632 Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust. Identities = 267/614 (43%), Positives = 360/614 (58%), Gaps = 5/614 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAA +A +G T L+T + M CNP++GG KG +VREIDAL Sbjct: 10 YDVIVVGAGHAGCEAALASAHMGQKTLLVTIGLDMVAFMPCNPSVGGPAKGTVVREIDAL 69 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ DA IQ R+LN KGPAVR R QAD+ Y M+ I + NL + Q V Sbjct: 70 GGQMGKNIDATYIQMRMLNTGKGPAVRALRAQADKWQYHEHMKDTIENTPNLTLRQAIVD 129 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + ++ + +VVLTTGT RG I IG+L +G +PS L + Sbjct: 130 ELVVEDGVCKGVITNTGAKYHAKSVVLTTGTAARGKIIIGELTYSSGPNNTTPSIKLSEN 189 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--NRQIECGIT 243 K F R KTGTP R++G TI + KTE++ D+ FSF + QI C +T Sbjct: 190 LEKLGFKLRRFKTGTPPRVNGNTIDYSKTEEEPGDKTPRHFSFESRDADYLKHQISCWMT 249 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II N+ + +++G IK GPRYCPSIEDK+VRF ++N HQIFLEPEG T Sbjct: 250 YTNPVTHEIIRNNLDRAPMFTGVIKGVGPRYCPSIEDKVVRFADKNRHQIFLEPEGKTTK 309 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY ST++PEE+Q + + ++ GLE ++RPGYAIEYD I P +L TLETKK+ L Sbjct: 310 EVYVGDFSTSMPEEVQLKMVHSVAGLEHAELMRPGYAIEYDVIEPWQLKHTLETKKLKHL 369 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ+NGT+GYEEAA QGL+AGIN+A + R D+YIGV+IDDL +KG EP Sbjct: 370 FTAGQMNGTSGYEEAAGQGLIAGINAALSAQNKPGFTLGRNDAYIGVLIDDLVTKGTNEP 429 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL-V 482 YR+ TSRAEYR+ LR DNAD RLT G +LG I + R KRF + Q + L + V Sbjct: 430 YRLLTSRAEYRLILRTDNADLRLTEYGHQLGLISDERYKRFEEKKQAIRDAKERLHGITV 489 Query: 483 LTSKNLSSTSISFKQDGKTR--TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + + S Q+ A FL P+ +I ++ + + K V E+++I Sbjct: 490 HLTDEVQEFLKSIGQEPMKAGVKADVFLRRPNVTIDDIERLTGEKIKGDRYVKEQVEIGI 549 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 YA Y ++ +K +E + IP D DY + L+ E ++K ++P L QA +I G Sbjct: 550 KYAGYIKKEETRIARLKRQEAKKIPADIDYEMIEGLATEARQKFEKIRPETLAQAERISG 609 Query: 601 MTPAALNLLLIYIK 614 + PA L +L +YI+ Sbjct: 610 VNPADLAILSVYIQ 623 >gi|227543713|ref|ZP_03973762.1| glucose-inhibited division protein A [Lactobacillus reuteri CF48-3A] gi|300908778|ref|ZP_07126241.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus reuteri SD2112] gi|227186281|gb|EEI66352.1| glucose-inhibited division protein A [Lactobacillus reuteri CF48-3A] gi|300894185|gb|EFK87543.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus reuteri SD2112] Length = 647 Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust. Identities = 268/625 (42%), Positives = 372/625 (59%), Gaps = 15/625 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+G GHAG EAA A ++G T L+T + M CNP++GG KG +VREIDA Sbjct: 19 SYDVIVVGAGHAGSEAALAATRMGNKTLLVTINLEMVAFMPCNPSVGGPAKGIVVREIDA 78 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG D +Q R+LN KGPAVR R QAD+ Y AM++ I + NL + Q V Sbjct: 79 LGGEMGHNIDKTYVQMRMLNTGKGPAVRALRAQADKHAYHRAMKQTIEEEPNLTLRQATV 138 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ + TVVLT GT RG I IG+L+ +G + L Sbjct: 139 DQLIVEDGVCKGVITNTGARYHAKTVVLTVGTAARGKIIIGELQYESGPNNSKSAVKLSE 198 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT----NRQIEC 240 + + FD R KTGTP R++GKTI + TE+Q DE FSF T + Q+ C Sbjct: 199 NLEELGFDLERFKTGTPPRVNGKTIDYSVTEEQPGDEEPHHFSFDTPDSAYIPISEQLSC 258 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +T TN TH II EN+ + ++SG IK GPRYCPSIEDKIVRF ++ HQ+FLEPEG Sbjct: 259 WLTYTNEGTHAIIRENLSRAPMFSGVIKGVGPRYCPSIEDKIVRFADKPRHQVFLEPEGR 318 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 +TD Y +GIST++PEEIQ + + +I GLE ++RPGYAIEYD + P +L PTLETK I Sbjct: 319 DTDEYYLDGISTSMPEEIQQKIVHSIKGLENAEMMRPGYAIEYDVVAPYQLHPTLETKII 378 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 L+ AGQ NG++GYEEAA QGL+AGIN+ ++ + R+D+YIGVMIDDL +KG Sbjct: 379 KNLYTAGQTNGSSGYEEAAGQGLIAGINAGLRAQGKEPFVLKRSDAYIGVMIDDLVTKGT 438 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYR+ TSRAEYR+ LR DNAD RL +G +G + + +R AK ++ + + +K Sbjct: 439 KEPYRLLTSRAEYRLILRHDNADFRLMEMGHNVGLVSD---ERLAKMEEKKRQVAAEIKR 495 Query: 481 LVLTSKNLSSTSIS--FKQDGKTR-----TAYEFLSYPDFSIQNLFSICP-DARKFSSLV 532 L S ++ + G R A + L P F Q L P ++ V Sbjct: 496 LEEIKLKPSDDKVNEFIEAHGDNRLKDGIAAADLLKRPYFDYQTLAEFIPAPEQELDRHV 555 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 IE+++I+ YA Y ++ ++ + +K E + IP D DY + L+ E ++KL ++P L Sbjct: 556 IEQVEIQLKYAGYIKKEEVKVERMKRMEAKRIPDDIDYGDIDGLATEGRQKLEKIRPETL 615 Query: 593 LQASKIEGMTPAALNLLLIYIKKNT 617 QAS+I G+ PA + +L +Y+++ T Sbjct: 616 AQASRISGVNPADIAILSVYVRQGT 640 >gi|50365486|ref|YP_053911.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Mesoplasma florum L1] gi|81170555|sp|Q6F0E6|MNMG_MESFL RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|50364042|gb|AAT76027.1| glucose inhibited division protein A [Mesoplasma florum L1] Length = 626 Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust. Identities = 260/624 (41%), Positives = 380/624 (60%), Gaps = 13/624 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +N+ +DVIVIGGGHAG EAA +A+L TALI I +M CNP++GG KG +VRE Sbjct: 1 MNKHFDVIVIGGGHAGVEAALASARLNKKTALINLYKDRIAAMPCNPSVGGPAKGIVVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M + AD +Q ++LN +GP V R Q+D+E Y MQ+ + Q NL +I+ Sbjct: 61 IDALGGEMAKAADKTALQTKLLNSSRGPGVWALRVQSDKEEYSKYMQKIVEEQINLQLIE 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 E N ++ ++++D +++ VVLTTGT+L+ I G K +G + SN Sbjct: 121 SIATDLIIENNTVTGVLLKDGEILKSKCVVLTTGTYLKSEILTGHEKFSSGPNEEPTSNG 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--NRQIE 239 + S K + R KTGTP R+ ++ K K+ + + FSF T++ T +Q Sbjct: 181 ISESLKKSGVELFRFKTGTPPRIYKNSVDLSKAIKEPGTDAKLAFSFSTNEYTPIEKQEL 240 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C + ++ ET +II +N+ SA+YSG ++S GPRYCPS EDKIVRF + HQIF+EPE Sbjct: 241 CYLIHSSSETKKIIEDNLTKSAMYSGKVESIGPRYCPSFEDKIVRFSSKETHQIFIEPES 300 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 ++ D Y G ST++P ++Q IR++PG EK + YAIEYD +NP +L P+LE K Sbjct: 301 ISGDAWYIQGFSTSMPTDVQLLMIRSLPGFEKAEVKTWAYAIEYDCVNPMQLNPSLEIKN 360 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I+ LF AGQINGT+GYEEAA QGL+AGIN++RK + LD + R ++YIGVMIDDL +KG Sbjct: 361 INNLFTAGQINGTSGYEEAAGQGLIAGINASRKIDGLDPLILRRDEAYIGVMIDDLINKG 420 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 V EPYR+ TSRAE+R+ LR DNA++RL G ++G I + + KY +E N L+ Sbjct: 421 VWEPYRLLTSRAEHRLLLRNDNAEHRLKEKGYEIGLIKQAEYNEYLKYTEEINNAIKELE 480 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAY-----EFLSYPDFSIQNLFSICPDARKFSSLVIE 534 + T K S +I K+ G+ ++ E L P I+ + + + ++ Sbjct: 481 EIRFTPK--SELAIKLKELGQADLSHGYSGIEILKIPTVDIEVMIPYISSLQNLKNNQLQ 538 Query: 535 RLQIESSYAAY--TGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 + IE+ +A Y T R+ +E + +K E+K+ IP D DY + L+ E ++KL +KP N+ Sbjct: 539 SIVIETRFAGYVKTERKTVE-RLVKLEKKK-IPSDIDYDKVENLATEARQKLKKVKPLNI 596 Query: 593 LQASKIEGMTPAALNLLLIYIKKN 616 QAS+I G+ PA + +LL Y+K N Sbjct: 597 GQASRITGVNPADIQMLLFYLKNN 620 >gi|227511144|ref|ZP_03941193.1| glucose-inhibited division protein A [Lactobacillus buchneri ATCC 11577] gi|227523331|ref|ZP_03953380.1| glucose-inhibited division protein A [Lactobacillus hilgardii ATCC 8290] gi|227085626|gb|EEI20938.1| glucose-inhibited division protein A [Lactobacillus buchneri ATCC 11577] gi|227089522|gb|EEI24834.1| glucose-inhibited division protein A [Lactobacillus hilgardii ATCC 8290] Length = 645 Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust. Identities = 260/626 (41%), Positives = 376/626 (60%), Gaps = 14/626 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+G GHAGCEAA AA++G T ++T + M CNP++GG KG +VRE+D Sbjct: 16 KNYDVIVVGAGHAGCEAALAAARMGNKTLVLTINLDMVAFMPCNPSVGGPAKGTVVREVD 75 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G MGR D +Q R+LN KGPAV+ R QAD+ Y M+ + ++ NL + Q Sbjct: 76 ALGGEMGRNIDKTYVQMRMLNTGKGPAVQALRAQADKHAYHAEMKHTMENEPNLTLRQAI 135 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + ++ + +VV+ GT RG I IG+L +G P+ L Sbjct: 136 VDSLIVEDGVCKGVITNTGAKYFAKSVVIAAGTAARGKIIIGELMYASGPNNSQPAEKLS 195 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSF-MTDK---ITNRQIE 239 S + FD R KTGTP R+DG TI + KTE+Q DE+ FSF +DK Q+ Sbjct: 196 GSLEELGFDLERFKTGTPPRVDGTTIDYSKTEEQPGDEKPHHFSFESSDKDYLAVKDQLS 255 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +T TN TH+II EN+ + +++G I+ GPRYCPSIEDKIVRF +++ HQ+FLEPEG Sbjct: 256 CWLTYTNETTHKIIRENLDRAPMFTGVIEGVGPRYCPSIEDKIVRFADKSRHQLFLEPEG 315 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 T+ Y +G+ST++PEE+Q Q + TI GLE ++RPGYAIEYD + P +L PTLETK Sbjct: 316 RKTEEWYVDGLSTSMPEEVQQQMLHTISGLENAEMMRPGYAIEYDVVAPYQLKPTLETKI 375 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 + LF AGQ NGT+GYEEAA QG++AGIN+ R++ R ++YIGVMIDDL +KG Sbjct: 376 VKNLFTAGQTNGTSGYEEAAGQGIIAGINAGRRALGQGPFVLKRNEAYIGVMIDDLVTKG 435 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRS--- 476 EPYR+ TSRAEYR+ LR DNAD RLT G ++G I + +R+A+++ + + S Sbjct: 436 TKEPYRLLTSRAEYRLLLRTDNADMRLTEKGHEIGLISD---ERYAQFLSKKKAIESEID 492 Query: 477 LLKSLVLTSKNLSSTSISFKQDGKTRT---AYEFLSYPDFSIQNLFSICPDARK-FSSLV 532 L S+ + ++ + + D + A FL P Q L D + V Sbjct: 493 RLNSIRIKPSDVVNKFVEAHGDKPLKDGVIASVFLRRPYVDYQTLLQFISDPEQHLDRHV 552 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 IE+++I++ YA Y + +++K E + IP DY ++ ++ E ++KL + P + Sbjct: 553 IEQVEIQTKYAGYIAKAESSVEKMKRMEAKKIPNRIDYEAIDGIATEARQKLQKIHPETI 612 Query: 593 LQASKIEGMTPAALNLLLIYIKKNTV 618 QAS+I G+ PA + +L +YI++ + Sbjct: 613 AQASRISGVNPADIAILSVYIQQGKI 638 >gi|317504353|ref|ZP_07962339.1| glucose inhibited division protein A [Prevotella salivae DSM 15606] gi|315664544|gb|EFV04225.1| glucose inhibited division protein A [Prevotella salivae DSM 15606] Length = 623 Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust. Identities = 257/623 (41%), Positives = 372/623 (59%), Gaps = 15/623 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIGGGHAGCEAA +A++GA T LIT + +G MSCNPA+GG+ KG +VREIDA Sbjct: 4 NYDVIVIGGGHAGCEAAVASARMGAKTCLITMDMNKVGQMSCNPAVGGIAKGQIVREIDA 63 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGRV D IQFR+LN+ KGPAV PR Q DR + + + + +NLD+ Q EV Sbjct: 64 LGGQMGRVTDKTAIQFRMLNIGKGPAVWSPRAQCDRGKFIWEWRTTLDNTDNLDIWQDEV 123 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + + + + ++V+T GTFL G++HIG I GR + + Sbjct: 124 NELIVQNHEAIGVKTIWDVEFYAKSIVVTAGTFLNGLMHIGHKMIEGGRCAEPAVHHFTE 183 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S ++ + R+KTGTP R+D +++ ++ E+Q D FS++ + T RQ+ C T Sbjct: 184 SITRWGITSSRMKTGTPVRIDKRSVDFNAMEEQQGDHDFHQFSYLNEHRTLRQLPCWTTY 243 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN H + + + S +++G I+S GPRYCPSIE K+V F +++ H +FLEPEG NT+ Sbjct: 244 TNAAVHEELQKGLADSPLFNGQIQSTGPRYCPSIETKLVTFPDKHQHPLFLEPEGENTNE 303 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y NG S+++P ++Q + IP L + I RPGYAIEYDY +P +L +LE+K +SGLF Sbjct: 304 MYLNGFSSSMPMDVQLAALHKIPALREAKIYRPGYAIEYDYFDPTQLKHSLESKILSGLF 363 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ+NGTTGYEEA QG+VAGIN+A K + + R SYIGV+IDDLT+KGV EPY Sbjct: 364 FAGQVNGTTGYEEAGGQGIVAGINAALKCSGSEPFVMQRDQSYIGVLIDDLTTKGVDEPY 423 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYRI LR D+AD RLT +LG R + + + L K + Sbjct: 424 RMFTSRAEYRILLRQDDADARLTEKAYELGIATRERYDWWLQKKEAVQRLIDFCKDFPIK 483 Query: 485 SKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSL-------V 532 ++ ++S + G T + ++ P ++QNL I P ++ +L + Sbjct: 484 AQEINS---ELEALGTTPLRAGCKLSDLIARPHLTLQNLSEIIPALKEAINLSENRKEEI 540 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 E +I+ Y Y R+ + A ++ E I F YS L +S E ++KL + P L Sbjct: 541 AEAAEIQLKYQGYIEREKLIADKMHRLENIKIKGRFKYSELHEISTEGRQKLEKINPETL 600 Query: 593 LQASKIEGMTPAALNLLLIYIKK 615 QAS+I G++P+ +N+LL+ + + Sbjct: 601 AQASRIPGVSPSDINVLLVLLGR 623 >gi|295398146|ref|ZP_06808195.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Aerococcus viridans ATCC 11563] gi|294973665|gb|EFG49443.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Aerococcus viridans ATCC 11563] Length = 633 Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust. Identities = 264/623 (42%), Positives = 378/623 (60%), Gaps = 12/623 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAG EAA AA++GA T LIT + M CNP+IGG KG +VREIDAL Sbjct: 10 YDVIVVGAGHAGSEAALAAARMGAETMLITINIDMVAFMPCNPSIGGPAKGVVVREIDAL 69 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MGR D IQ R+LN KGPAVR R QAD++ Y M++ I +Q++L + QG V Sbjct: 70 GGEMGRNIDKTYIQMRMLNTGKGPAVRALRAQADKDEYAKEMRKTIENQDHLTLRQGLVD 129 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF-N 184 E + + I+ ++ R V+LTTGT RG I IG+LK +G P+ L N Sbjct: 130 DLIIEDDTVKGIITNTGAIYRADAVILTTGTAARGEIIIGELKYSSGPNNSQPAEKLTRN 189 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN----RQIEC 240 K+ FD R KTGTP R+D +TI +D TE Q D+ FSFM+ Q+ C Sbjct: 190 MAEKYGFDIARFKTGTPPRVDKRTINYDATEIQPGDDAPNHFSFMSKDADYLPLVDQVPC 249 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +T TN TH I EN+ + +++G ++ G RYCPSIEDKIVRF ++ HQIFLEPEGL Sbjct: 250 FLTYTNEATHETIRENLHRAPMFTGIVEGVGARYCPSIEDKIVRFADKPKHQIFLEPEGL 309 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + + +Y G+ST+LPE++Q+ I ++ GLE I+R GYAIEYD + P +L LETK++ Sbjct: 310 DNEEIYVQGLSTSLPEDVQNDMIHSVKGLENARIMRNGYAIEYDVVKPNQLKVNLETKQV 369 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 + LF AGQ NGT+GYEEAA QGL AGIN+ K + R YIGVMIDDL +KG Sbjct: 370 ANLFTAGQTNGTSGYEEAAGQGLYAGINAVLKIRGEEPFVIGRDQGYIGVMIDDLVTKGT 429 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF----AKYIQEYNFLRS 476 EPYR+ TSRAEYR+ LR DNAD RLT G + G + E + + A+ +E + L + Sbjct: 430 TEPYRLLTSRAEYRLLLRHDNADTRLTEKGYEFGLVSEEQYNLYKSNQAEVAEELDRLAN 489 Query: 477 L-LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIER 535 + LK L+ + + +DG A + L P+ I ++ P + S V+E+ Sbjct: 490 VRLKPTQELQDYLAEKNSAALKDGI--MASDLLRRPELKIDDILKFAPSDKDLSRQVLEQ 547 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ YA Y ++ + +++ E++ IP D D+ ++ +L+ E +++L + P L QA Sbjct: 548 VEIQIKYAGYIVKEQRKVEKLHRLEQKEIPADIDWDAIDSLATEARQRLKEIGPRTLAQA 607 Query: 596 SKIEGMTPAALNLLLIYIKKNTV 618 S++ G+ PA ++++++Y++ V Sbjct: 608 SRVSGVNPADVSIIMVYLQGGHV 630 >gi|268610511|ref|ZP_06144238.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ruminococcus flavefaciens FD-1] Length = 629 Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust. Identities = 274/632 (43%), Positives = 386/632 (61%), Gaps = 28/632 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DV V+G GHAG EAA AA+LG T + T I +M CNP+IGG KGHLVREIDAL Sbjct: 8 FDVAVVGAGHAGVEAALAAARLGCRTVMFTISLDQIANMPCNPSIGGTAKGHLVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ AD IQ R+LN KGPAV R QADR Y M+ QENL V Q +VA Sbjct: 68 GGEMGKGADECFIQSRMLNRGKGPAVHSLRVQADRVKYHNYMKNVCEKQENLYVKQADVA 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E I + V++ TGT+L+G IHIG++ +G PS L +S Sbjct: 128 EVICENGKIIGVRTSLGVEYSVKAVIIATGTYLKGKIHIGEVSYESGPDSALPSVRLSDS 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 + R KTGTP R++ ++I +D E+Q D++++PFSF T D + N Q+ C +T Sbjct: 188 LRAAGVELRRFKTGTPCRVNKRSIDFDVMERQDGDDKIVPFSFETPVDGLEN-QVSCYVT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH +I+ N+ S +YSG I+ GPRYCPSIEDKIVRF ++ HQ+F+EP GL+T+ Sbjct: 247 YTNSNTHEVILSNLDRSPLYSGRIEGVGPRYCPSIEDKIVRFSDKPRHQLFVEPMGLSTE 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 Y G+S++LPE++Q F+RTI GLE V I+RP YAIEYD +P +L PTLE KKI GL Sbjct: 307 EYYLQGMSSSLPEDVQLAFLRTITGLEHVEIMRPAYAIEYDCCDPLQLLPTLEFKKIEGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQ NG++GYEEAAAQG+VAGIN+A K + + R SYIG ++DDL +KG +P Sbjct: 367 YGAGQFNGSSGYEEAAAQGIVAGINAALKIKGEEPMILDRASSYIGTLVDDLVTKGCSDP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRM TSR+EYR+ LR DNAD RLTPIG K+G I + R ++ I+ + +KS + Sbjct: 427 YRMMTSRSEYRLILRQDNADQRLTPIGHKIGLISDERYRKLLSKIKLVDDEIKRVKSTNI 486 Query: 484 TSKN-----LSSTSISFKQDG--------KTRTAYEFLSYPDFSIQNLFSICPDARKFSS 530 + + L S S G + + YE L+ D S + L PD Sbjct: 487 SPNSELNAFLESIGTSAMTTGCKLADLIRRPQVKYEDLAKYDVSRETL----PDD----- 537 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 V E+++++ Y Y +Q+ + +++ E + +PK+ DYS + L E EKL+ ++P Sbjct: 538 -VCEQVELQIKYEGYISKQLEQIDQVRKLEDKKLPKNTDYSQIRGLRLEAAEKLNKIQPL 596 Query: 591 NLLQASKIEGMTPAALNLLLIYIKKNTVKLNE 622 ++ QAS+I G++PA +++L++++ +T+K E Sbjct: 597 SIGQASRISGVSPADVSMLVVWL--HTMKEGE 626 >gi|229824622|ref|ZP_04450691.1| hypothetical protein GCWU000282_01969 [Catonella morbi ATCC 51271] gi|229785993|gb|EEP22107.1| hypothetical protein GCWU000282_01969 [Catonella morbi ATCC 51271] Length = 638 Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust. Identities = 257/623 (41%), Positives = 381/623 (61%), Gaps = 13/623 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 Y+VIV+G GHAG EAA AA++G T L+T + M CNP++GG KG +VREIDAL Sbjct: 9 YEVIVVGAGHAGSEAALSAARMGCRTLLLTISLEMVAFMPCNPSVGGPAKGVVVREIDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MGR D IQ R+LN KGPAV+ R QAD+ Y AM++ I + NLD+ QG V Sbjct: 69 GGEMGRNIDKTYIQMRMLNTGKGPAVQALRAQADKHAYATAMKQTIEACPNLDLKQGLVD 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E+ + +V + VVLT GT RG I IG+LK +G PS L Sbjct: 129 RLVVEEGQVRGVVTSTGARYSADAVVLTAGTSSRGQIIIGELKYSSGPNNTLPSQKLSEH 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ--IECGIT 243 ++ F+ R KTGTP R+ +I ++ E Q D + FSF+T R + C +T Sbjct: 189 LLELGFELARFKTGTPMRIHKSSINYEAMEIQPGDSQPNHFSFLTPDADYRPDFVPCWLT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 T+ +TH +I N+ + +++G ++ G RYCPSIEDKIVRF ++ HQIF+EPEGL TD Sbjct: 249 HTSQDTHEVIKANLHRAPMFTGIVEGVGARYCPSIEDKIVRFSDKPRHQIFVEPEGLTTD 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G+ST++PE++Q + + ++ GLE ++RPGYAIEYD + P +L +LETK + GL Sbjct: 309 EMYIQGLSTSMPEDVQLEMLHSVAGLENAKLMRPGYAIEYDVVIPHQLRASLETKLVRGL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQ+NGT+GYEEAA QGL+AGIN+AR+ D + R+D YIGVMIDDL +KG EP Sbjct: 369 YTAGQMNGTSGYEEAAGQGLIAGINAARQVQGKDPLIIKRSDGYIGVMIDDLVTKGTTEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF--AKYIQEYNFLRSLLKSL 481 YR+ TSRAEYR+ LR DNAD RLT IG ++G + ++R + + K + + R LK + Sbjct: 429 YRLLTSRAEYRLLLRHDNADLRLTEIGHQIGLVDDQRYETYLAKKALVDAEIKR--LKKI 486 Query: 482 VLTSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDAR-KFSSLVIER 535 LT K + F++ G + +A+ L P+ +L ++ P E+ Sbjct: 487 TLTPKTPGLEEL-FERVGSSSLLDGISAFNLLKRPEIRYLDLVTLIPRPEGPLERQEAEQ 545 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y + + + +++K E++ IP+D DY ++ L+NE +++L +++P L QA Sbjct: 546 VEIQIKYEGYIQKAIEKVEKVKAMEEKRIPEDIDYDAILNLANEARDRLKLIQPTTLAQA 605 Query: 596 SKIEGMTPAALNLLLIYIKKNTV 618 S++ G+ PA + +L +YI++ + Sbjct: 606 SRVSGVNPADIAILSVYIQQGKI 628 >gi|331002966|ref|ZP_08326478.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Lachnospiraceae oral taxon 107 str. F0167] gi|330413010|gb|EGG92385.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Lachnospiraceae oral taxon 107 str. F0167] Length = 628 Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust. Identities = 263/623 (42%), Positives = 378/623 (60%), Gaps = 9/623 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD++V+G GHAGCEAA V A+LG T + T +I M CNP IGG KGHLV+E+DAL Sbjct: 7 YDIVVVGAGHAGCEAALVGARLGLKTVIFTVSVDSIALMPCNPNIGGSSKGHLVKELDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ D IQ ++LN KGPAV R QAD++ Y M++ + + NL + Q E+ Sbjct: 67 GGEMGKCIDKTFIQSKMLNASKGPAVHSLRAQADKQEYSKEMRKTLENTPNLSICQKEIT 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E NI + S V+L TGT+L G++ G G +N L +S Sbjct: 127 KLIIEDNICKGVETISGSKYYAKAVILATGTYLNARCIYGEVAEYTGPNGLKSANHLTSS 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KITNRQIECGIT 243 +++ D R KTGTPAR+DG+TI ++ E+Q+ D ++PFSF TD I Q++C + Sbjct: 187 LIEYGIDLNRFKTGTPARVDGRTINYEVMEEQYGDNPVVPFSFETDPESIQKEQVKCYLA 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 T+ +TH II +NI S ++SG IK GPRYCPSIEDK+V+F +++ HQIF+EPEG T+ Sbjct: 247 YTSEKTHEIIRKNIDRSPLFSGAIKGTGPRYCPSIEDKVVKFPDKDRHQIFVEPEGFYTN 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y +G+S++LPE++Q + IR+I G E V I+R GYAIEYD I+ ++L +LE + I GL Sbjct: 307 EMYLSGLSSSLPEDVQDEMIRSIEGFENVEIVRNGYAIEYDCIDARQLKDSLEFRAIEGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ NG++GYEEAA QGL+AGIN++ K D + R YIGV+IDDL +K EP Sbjct: 367 FAAGQFNGSSGYEEAAVQGLMAGINASMKILGRDPVVIGRDQGYIGVLIDDLVTKESHEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRM TSR+EYR+ LR DNAD RLT +G +G I E R +R + ++ + LK++ + Sbjct: 427 YRMMTSRSEYRLLLRQDNADIRLTKLGYDIGLISEERYQRLLEKEKQIEEEINRLKNIHI 486 Query: 484 TSKNLSSTSISFKQDGKT-----RTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 + NL K +G T E + P+ + I + ++ V +++ I Sbjct: 487 GA-NLKVQEFLVK-NGSTPLQTSANLAEVIRRPELNYDLTKEIDDNRKELRKEVRDQVNI 544 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 Y Y RQ + K+ K E + IP D DYS + +L E +KLS +KP ++ QAS+I Sbjct: 545 NIKYEGYIKRQESQVKQFKKLENKKIPADIDYSKVNSLRIEAVQKLSKVKPSSIGQASRI 604 Query: 599 EGMTPAALNLLLIYIKKNTVKLN 621 G++PA + +LL+Y++ K N Sbjct: 605 SGVSPADITVLLVYLETYKEKKN 627 >gi|116496319|ref|YP_808053.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus casei ATCC 334] gi|122262284|sp|Q033L1|MNMG_LACC3 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|116106469|gb|ABJ71611.1| tRNA uridine 5-carboxymethylaminomethyl modification FAD-utilizing enzyme [Lactobacillus casei ATCC 334] Length = 633 Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust. Identities = 271/620 (43%), Positives = 373/620 (60%), Gaps = 8/620 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAGCEAA AA++G T L+T + M CNP++GG KG +VREIDA Sbjct: 11 TYDVIVVGAGHAGCEAALAAARMGQKTLLLTISLEMLAFMPCNPSLGGPAKGIVVREIDA 70 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ R+LN KGPAVR R QAD+ Y +M+ I + NLD+ QG Sbjct: 71 LGGEMGKNIDRTYIQMRMLNTGKGPAVRALRAQADKAAYHRSMKHVIENTPNLDLRQGLA 130 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E IV +M R +VVLT GT RG I IG+L +G PS L Sbjct: 131 TEVLVENGQAVGIVAATGAMYRAKSVVLTAGTSSRGKIIIGELMYSSGPNNSLPSIKLSE 190 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNR-QIECGI 242 + + F R KTGTP R++G TI +DKTE+Q D+ FSF T D + + Q+ C + Sbjct: 191 NLEQLGFKLRRFKTGTPPRVNGNTIDFDKTEEQPGDKTPNHFSFTTPDSVYLKDQLSCWM 250 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH+II +N+ + ++SG IK GPRYCPSIEDKIVRF ++ HQ+FLEPEG +T Sbjct: 251 TYTNATTHQIIRDNLDRAPMFSGVIKGVGPRYCPSIEDKIVRFADKPRHQLFLEPEGRDT 310 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 Y ST++PEEIQ + + ++ GLE ++R GYAIEYD I P +L TLETK + Sbjct: 311 SEYYVGDFSTSMPEEIQLKMLHSVAGLEHAELMRAGYAIEYDVIEPWQLKATLETKVVDN 370 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQ+NGT+GYEEAA QG++AGIN+A ++ R+D+YIGVMIDDL +KG E Sbjct: 371 LFTAGQMNGTSGYEEAAGQGIMAGINAALRAQGKGPFTLKRSDAYIGVMIDDLVTKGTNE 430 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYR+ TSRAEYR+ LR DNAD RL P+G +LG I + R F Q + L + Sbjct: 431 PYRLLTSRAEYRLLLRHDNADLRLKPMGHELGLISDERYAEFLAKRQAIETELNRLNTTR 490 Query: 483 LTSKN----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 L K+ L + + +DG A +FL P+ Q + PD VIE+++I Sbjct: 491 LKPKDVNPWLEAHHYAPLKDGV--LASDFLKRPEIDYQTMAQFLPDNPTLDHRVIEQVEI 548 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + YA Y ++ ++K E + IP +Y+++ L+ E ++KL ++P + QAS+I Sbjct: 549 QIKYAGYIAKEEASVAKLKRLEGKKIPLRINYAAINGLATEARQKLVKIQPETIAQASRI 608 Query: 599 EGMTPAALNLLLIYIKKNTV 618 G+ PA + +L +YI++ + Sbjct: 609 SGVNPADVAILSVYIEQGRI 628 >gi|298207256|ref|YP_003715435.1| glucose-inhibited division protein A [Croceibacter atlanticus HTCC2559] gi|83849892|gb|EAP87760.1| glucose-inhibited division protein A [Croceibacter atlanticus HTCC2559] Length = 623 Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust. Identities = 276/636 (43%), Positives = 388/636 (61%), Gaps = 38/636 (5%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M YDVIV+G GHAG EAAA AA +G ST LIT I MSCNPA+GG+ KG +VR Sbjct: 1 MFESEYDVIVVGAGHAGSEAAAAAANMGCSTLLITMNLQNIAQMSCNPAMGGIAKGQIVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G G V+D + IQF++LN KGPA+ PR Q+DR + + ++ NLD Sbjct: 61 EIDALGGYSGIVSDTSAIQFKMLNKSKGPAMWSPRVQSDRMRFAEDWRLKLEQTPNLDFY 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q VAG EK+ + + +R TVVLT GTFL G+IHIG+ + GR G+ + Sbjct: 121 QEMVAGLIVEKDKLVGVRTSLGLEVRGKTVVLTNGTFLNGLIHIGEKQFGGGRAGERAAT 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT---NRQ 237 + + F++GR+KTGTP R+DG+++ + K +Q D+ IP+ F IT +Q Sbjct: 181 GITADLLNLGFESGRMKTGTPPRVDGRSLDYSKMTEQPGDD--IPWKFSYSDITKPLEKQ 238 Query: 238 IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 C +T T+ E H ++ E S +++G I+S GPRYCPSIEDKI RF +++ HQ+F+EP Sbjct: 239 RSCYMTYTSPEVHDLLREGFDRSPMFNGRIQSIGPRYCPSIEDKINRFADKDRHQMFIEP 298 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EG NT VY NG ST+LPE++Q + +R++ G EKV RPGYAIEYDY P +L TLET Sbjct: 299 EGWNTVEVYVNGFSTSLPEDVQFKALRSVVGFEKVKFFRPGYAIEYDYFPPTQLKHTLET 358 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 K + GLF AGQINGTTGYEEAA+QGL+AG+N+A K + D R ++YIGV+IDDL + Sbjct: 359 KLVDGLFFAGQINGTTGYEEAASQGLIAGVNAALKVKEQDEFILKRDEAYIGVLIDDLIT 418 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL 477 KG EPYRMFTSRAEYR LR DNAD RLT ++G E +R+ K + + + S Sbjct: 419 KGTEEPYRMFTSRAEYRTLLRQDNADFRLTGKSFEIGLASE---ERYNKMLDKKDKSESF 475 Query: 478 LKSLVLTSKNL--------SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFS 529 + TS + + S + KQ+ K ++ S P ++ D R+F+ Sbjct: 476 VDFFKNTSYDWKEANEILKENNSATVKQNDKL---FKLFSRPQITMD-------DVRQFN 525 Query: 530 SL------------VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALS 577 + V+E+ +++ YA Y ++ A +++ E IP DFDYS L ++S Sbjct: 526 DVENYIQEHNLDTEVLEQTEVQVKYAGYIEKEKNNADKLQRLEYVKIPSDFDYSQLKSMS 585 Query: 578 NELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYI 613 E +EKL ++P + QAS++ G+ PA +++LL+Y+ Sbjct: 586 YEAREKLQEIQPRTVSQASRVSGVNPADISVLLVYL 621 >gi|302388591|ref|YP_003824413.1| glucose inhibited division protein A [Clostridium saccharolyticum WM1] gi|302199219|gb|ADL06790.1| glucose inhibited division protein A [Clostridium saccharolyticum WM1] Length = 633 Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust. Identities = 258/618 (41%), Positives = 377/618 (61%), Gaps = 11/618 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+++G GHAGCEAA A+LG T + T +I M CNP IGG KGHLVRE+DAL Sbjct: 8 YDVVIVGAGHAGCEAALACARLGLETIMFTVSVDSIALMPCNPNIGGSSKGHLVRELDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ D IQ ++LN KGPAV R QAD++ Y AM+ + + ++L + Q EV+ Sbjct: 68 GGEMGKNIDKTFIQSKMLNQSKGPAVHSLRAQADKQEYSRAMRMTLENTDHLTIRQAEVS 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E ++ + ++ C VL TGT+L+ G + G G +N L +S Sbjct: 128 EIIVEDGTLTGVKTISGAVYHCKAAVLATGTYLKARCIYGDVSEYTGPNGLKAANHLTDS 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK--ITNRQIECGIT 243 + + R KTGTPAR+D ++I + + E+QF DE+++PFSF TD+ + Q+ C +T Sbjct: 188 LKEHGIEMLRFKTGTPARVDKRSIDFSRMEEQFGDEKVVPFSFSTDRKALQKDQVSCWLT 247 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH+II ENI S +YSG I+ GPRYCPSIEDK+V+F ++ HQ+F+EPEGL T+ Sbjct: 248 YTNENTHQIIRENIDRSPLYSGAIEGTGPRYCPSIEDKVVKFSDKERHQVFVEPEGLFTN 307 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G+S++LPE++Q+ RT+PGLE V I+R YAIEYD IN ++L TLE I GL Sbjct: 308 EMYLAGMSSSLPEDVQYAMYRTVPGLENVRIVRNAYAIEYDCINSRQLKSTLELMSIRGL 367 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F GQ NG++GYEEAA QG +AG+N+A K + + R+ +YIGV+IDDL +K EP Sbjct: 368 FCGGQFNGSSGYEEAAVQGFMAGVNAAMKLLGREQVVLDRSQAYIGVLIDDLVTKENHEP 427 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRM TSRAEYR+ LR DNAD RL IG +G I +++ K +++ + ++ L Sbjct: 428 YRMMTSRAEYRLLLRQDNADLRLMKIGHDIGLIS---HEQYEKLLEKERLIEEEIRRLES 484 Query: 484 TSKNLSSTSISF-KQDGKT-----RTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 T+ S +F +++G T T E + P+ L +I VIE++ Sbjct: 485 TNIGASREVQAFLEENGSTPLKTGTTLAELVRRPELDYIMLTNIDNQRPLLPEDVIEQVN 544 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I Y Y RQ + + K E + + +FDYSS+ L E +KL++ KP ++ QAS+ Sbjct: 545 INIKYDGYIRRQKQQVIQYKKLENKRLDVEFDYSSVKGLRREAIQKLNLYKPMSIGQASR 604 Query: 598 IEGMTPAALNLLLIYIKK 615 I G++PA +++LL+++++ Sbjct: 605 ISGVSPADISVLLVFLEQ 622 >gi|332653662|ref|ZP_08419406.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ruminococcaceae bacterium D16] gi|332516748|gb|EGJ46353.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ruminococcaceae bacterium D16] Length = 627 Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust. Identities = 262/616 (42%), Positives = 366/616 (59%), Gaps = 3/616 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YD+ VIG GHAG EAA AA++G T T +G+M CNPAIGG GKGHLVRE+DA Sbjct: 8 QYDIAVIGAGHAGIEAALAAARMGLRTVCFTINLDAVGNMPCNPAIGGTGKGHLVRELDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR AD A IQ+R+LN KGPAV R QADR Y+ M+ + QENL V Q EV Sbjct: 68 LGGEMGRAADKACIQYRILNRGKGPAVWSLRAQADRREYQKIMKHTLERQENLWVKQAEV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 TE +S++V ++ ++ TGT+L G +G++ +G G + + L Sbjct: 128 VAIRTENGAVSAVVTHTGAVFAVKAAIIATGTYLGGRTIVGEVVRDSGPDGLAAALPLTQ 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S ++ R KTGTP R++ +++ + + E Q D PFSF T + + C +T Sbjct: 188 SLLELGVSIRRFKTGTPPRVNARSVDFSQMELQEGDPDAQPFSFTTREHPQNRAVCYLTY 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH II N+ S +Y G I+ GPRYCPSIE KIVRF ++ HQ+F+EP GL+T+ Sbjct: 248 TNAKTHDIIRANLDRSPLYDGTIEGVGPRYCPSIETKIVRFPDKERHQLFVEPMGLDTEE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G S++LPE++Q + + TIPGLE+ + RP YAIEYD I+P +L TLE K + GL+ Sbjct: 308 LYIQGFSSSLPEQVQIEMLHTIPGLEQAEMTRPAYAIEYDCIDPTQLLATLEVKTVPGLY 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ NG++GYEEAA QG VAG+N+A K + R YIGV+IDDL +KG EPY Sbjct: 368 GAGQFNGSSGYEEAAVQGFVAGVNAALKIQGKEPFILGRDQGYIGVLIDDLVTKGTNEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCI-GERRQKRFAKYIQEYNFLRSLLKSLVL 483 RM TSR EYR+ R DNAD RLTP+G +LG + E+ + AKY + L + V Sbjct: 428 RMMTSRTEYRLLHRQDNADQRLTPLGYELGLVPKEQLEAVQAKYAAVDRECKRLEHTGVA 487 Query: 484 TSKNLSSTSISFKQDGKTRTA--YEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 S L + Q A + L P S ++L PD S + + ++I Sbjct: 488 PSPALDAFLAERNQAPVQNGARLADLLRRPPVSYESLAPFDPDRPDLSPEITQAVEIAVK 547 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y RQ+ + +E+K E +P D DY ++ L E ++KL ++P NL QAS++ G+ Sbjct: 548 YQGYIQRQLRQVEEMKKLESWPLPADTDYEAIQGLRLEARQKLQQIRPRNLGQASRVSGV 607 Query: 602 TPAALNLLLIYIKKNT 617 +PA + +L++Y+K+ T Sbjct: 608 SPADVAVLMVYLKQRT 623 >gi|260910778|ref|ZP_05917430.1| glucose-inhibited division protein A [Prevotella sp. oral taxon 472 str. F0295] gi|260635100|gb|EEX53138.1| glucose-inhibited division protein A [Prevotella sp. oral taxon 472 str. F0295] Length = 623 Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust. Identities = 255/622 (40%), Positives = 368/622 (59%), Gaps = 15/622 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+VIGGGHAGCEAA A +LGA T LIT + I MSCNPA+GG+ KG +VRE+DAL Sbjct: 5 YDVLVIGGGHAGCEAACAATRLGAKTCLITMDMNKIAQMSCNPAVGGIAKGQIVREVDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG + D+ IQFR+LN KGPAV PR Q DR Y + + S E LD+ Q + Sbjct: 65 GGEMGIITDSTSIQFRMLNKGKGPAVWSPRAQCDRAKYITKWRETLDSIEGLDIWQDQAD 124 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + R ++V+T GTFL G++H+GK++IP GR + S Sbjct: 125 ELLVENGTAVGVRTLWGAEFRAKSIVITAGTFLNGLMHVGKVQIPGGRCAEPAVYRFSES 184 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + R+KTGTP R+D +T+ +++ E+Q + FS+M T Q+ C T Sbjct: 185 ITRHGIAVDRMKTGTPVRIDARTVHFEEMERQDGEVDFHQFSYMGTPRTLTQLPCWTFYT 244 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 E H+ + E I S +++G I+S GPRYCPSIE K+V F ++ H +FLEPEG NT + Sbjct: 245 TQEAHQALQEGIADSPLFNGQIQSTGPRYCPSIETKLVTFPDKEQHLLFLEPEGENTAEM 304 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG S+++P ++Q +R IP L RPGYAIEYDY +P L +LE+K I GLF Sbjct: 305 YLNGFSSSMPLDVQLNALRKIPALRDAKAFRPGYAIEYDYFDPTLLHASLESKIIKGLFF 364 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ+NGTTGYEEAA QGLVAGIN+A N + R +SYIGV+IDDLT+KGV EPYR Sbjct: 365 AGQVNGTTGYEEAAGQGLVAGINAAIACNGGEPFVMKRDESYIGVLIDDLTTKGVDEPYR 424 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAEYRI LR D+AD RLT K+G ++R+ +I++ + +++ ++ Sbjct: 425 MFTSRAEYRILLRQDDADARLTERAYKIGLAS---RQRYDHWIEKKESIERIIRFCETST 481 Query: 486 KNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKF-------SSLVI 533 + + + ++ G T + ++ P ++Q L + P+ + ++ Sbjct: 482 VRANYINAALERWGTTPLNGSVKLADLIARPQLNVQGLAEVLPELKAVIEQTPNRKEEIV 541 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E +I+ Y Y R+ I A +++ E I F+Y L +S E ++KL+ + P L Sbjct: 542 EAAEIKMKYKGYIEREKIVADKMRRLENIRIKGHFNYEELHEISTEGRQKLARINPETLA 601 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I G++P+ +N+LL+ + + Sbjct: 602 QASRIPGVSPSDINVLLVLMNR 623 >gi|307128531|ref|YP_003880561.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG/GidA [Candidatus Sulcia muelleri CARI] gi|306482993|gb|ADM89863.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG/GidA [Candidatus Sulcia muelleri CARI] Length = 613 Score = 489 bits (1259), Expect = e-136, Method: Compositional matrix adjust. Identities = 267/628 (42%), Positives = 376/628 (59%), Gaps = 28/628 (4%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M YDVIV+GGGH+G EAA A+ LG+ T LIT IG MSCNPA+GG+ KG +++ Sbjct: 1 MFVNQYDVIVVGGGHSGSEAALAASNLGSRTLLITTNLYNIGQMSCNPAMGGIAKGQIIK 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADR----ELYRLAMQREILSQEN 116 EIDAL G G + D + IQFR+LN KGPA+ PR Q DR + +RL +++ + N Sbjct: 61 EIDALGGYSGIITDKSMIQFRMLNKSKGPAMWSPRAQCDRLKFSKEWRLTLEKNV----N 116 Query: 117 LDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGD 176 L Q V + N + + I+ +V+LT GTFL G+IHIG K GR+ + Sbjct: 117 LSFYQDTVIDLIIKNNKVIGVKTIFGISIKSKSVILTNGTFLNGIIHIGNKKKNGGRISE 176 Query: 177 SPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR 236 + L K F +G++KTGT RLDG ++ + K +Q D + PFS ++ Sbjct: 177 NSVKGLTEKLKKIGFLSGKMKTGTSPRLDGNSLNYSKMIEQLGDYPIEPFSSLSKLKIKN 236 Query: 237 QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLE 296 + +C IT TN++TH+++ E S +++G+IK GPRYCPSIE+KI RF + HQIF+E Sbjct: 237 KKKCYITYTNVKTHKLLREKFHKSPLFNGNIKCVGPRYCPSIEEKIYRFSNKENHQIFVE 296 Query: 297 PEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLE 356 PEG+NT VY NG ST++PE+IQ++ + TIPG EK +IRPGYAIEYDY P +L LE Sbjct: 297 PEGVNTREVYINGFSTSMPEKIQYKALITIPGFEKAKMIRPGYAIEYDYFTPTQLKNNLE 356 Query: 357 TKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 TK I LF AGQINGTTGYEEAAAQGL+AGIN+ K N+ R ++YIGV+IDDL Sbjct: 357 TKLIENLFFAGQINGTTGYEEAAAQGLIAGINANLKINEKKPFIIKRNEAYIGVLIDDLI 416 Query: 417 SKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRS 476 KG EPYRMFTSRAEYRI LR DNAD RLTPIG KLG + +F R Sbjct: 417 YKGTEEPYRMFTSRAEYRILLRQDNADERLTPIGEKLGLV---------------SFDRI 461 Query: 477 LLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNL--FSICPD---ARKFSSL 531 + K+ + + LS P+ I ++ +S+ D + Sbjct: 462 KKLEKKIKKIKKCLFFFKKKKIKENIKICDLLSRPEIDINDIIKYSLIKDFIKKNNINKK 521 Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 ++E++ I Y Y ++ K++ E IP +F+Y+ + ++S E +EKL KP + Sbjct: 522 ILEQISILIKYKGYLLKEEENVKKMLRLENIRIPNNFNYNKVKSISIEAREKLINYKPNS 581 Query: 592 LLQASKIEGMTPAALNLLLIYIKKNTVK 619 + +AS+I G++P+ +++L+I+++K K Sbjct: 582 IGEASRISGVSPSDISILIIFLRKKNKK 609 >gi|281355411|ref|ZP_06241905.1| glucose inhibited division protein A [Victivallis vadensis ATCC BAA-548] gi|281318291|gb|EFB02311.1| glucose inhibited division protein A [Victivallis vadensis ATCC BAA-548] Length = 624 Score = 489 bits (1259), Expect = e-136, Method: Compositional matrix adjust. Identities = 268/625 (42%), Positives = 359/625 (57%), Gaps = 13/625 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+VIG GHAGCEAA +A++GA T LIT I MSCNPAIGG+ KG +VREIDA+ Sbjct: 4 YDVVVIGAGHAGCEAAMASARIGAKTLLITLNMDHIAQMSCNPAIGGIAKGQVVREIDAM 63 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG V D+A IQFR+LN KGPAV PR+Q D+ Y+ M+ + +DV+Q EV Sbjct: 64 GGAMGIVTDSASIQFRMLNRTKGPAVWSPRSQCDKVCYQRGMKLWLEQMPQVDVLQSEVT 123 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 F + I+ + Q I C+ V+TTGTFL G +H G P GR GD PSNSL + Sbjct: 124 AFLMDNGKITGVTNQFGDEIHCAAAVVTTGTFLNGKLHYGLRNFPGGRAGDFPSNSLSAA 183 Query: 186 F-MKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-------DKITNRQ 237 + GRLKTGTPAR+ KTI + + +Q D FS + + Sbjct: 184 LGEQLKLRLGRLKTGTPARILAKTIDFSQMARQECDSAEERFSCWSAGHSPALPEAVRHD 243 Query: 238 IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 + C + ET I+ N+++S +Y G IK G RYCPS EDK+VRF + H +FLEP Sbjct: 244 LPCYQVYSTDETAEIVRRNLQYSPMYQGVIKGIGTRYCPSFEDKVVRFPQHPRHLLFLEP 303 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EG T+ Y NG+ST+LP E+Q Q I ++PG+E + R YAIEYD++ P +L TL Sbjct: 304 EGAQTEEYYINGLSTSLPPEVQRQLIHSVPGMEHAVLSRYAYAIEYDFVFPDQLERTLRI 363 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 K LF AGQINGT+GYEEAA QGL+AG+N+AR + + R SYIGVMIDDLT+ Sbjct: 364 KSCDNLFTAGQINGTSGYEEAAGQGLLAGLNAARIAQGKSPVELGRDSSYIGVMIDDLTT 423 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL 477 K ++EPYR+FTSRAEYR+ LR DNAD RL+ + G + E + + F Y + L Sbjct: 424 KDIIEPYRLFTSRAEYRLVLRQDNADLRLSEFAYETGLLPESKYREFCAYRSALTEVLEL 483 Query: 478 LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 +S K+L + A L +P L D R+ + E LQ Sbjct: 484 CRSRRHAGKSLLVHLKDLPDNTPLAEATVRLPFP----AGLLPELNDDRQGRRIWRE-LQ 538 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 +E+ Y Y R+ E ++ E IP DFDY + LSNE + KL ++P L QA + Sbjct: 539 VEARYDGYLQREAAEISRLRKLETLQIPADFDYDRIKGLSNESRSKLLKVRPTTLAQAGR 598 Query: 598 IEGMTPAALNLLLIYIKKNTVKLNE 622 I+G+TPA + LL + + + + E Sbjct: 599 IDGVTPADIALLQVALSRKNREATE 623 >gi|237752671|ref|ZP_04583151.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Helicobacter winghamensis ATCC BAA-430] gi|229376160|gb|EEO26251.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Helicobacter winghamensis ATCC BAA-430] Length = 629 Score = 489 bits (1259), Expect = e-136, Method: Compositional matrix adjust. Identities = 279/629 (44%), Positives = 372/629 (59%), Gaps = 29/629 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAG EA+ V+A++G T L+T IG+ SCNPA+GGLGKGHLV+EIDAL Sbjct: 3 YDVIVIGGGHAGIEASIVSARMGCKTLLLTMLVEQIGAASCNPAVGGLGKGHLVKEIDAL 62 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+MG + D +GIQFR LN KGPAVRG R Q D + Y++ + +NL+V Q V Sbjct: 63 GGVMGYITDKSGIQFRTLNASKGPAVRGTRAQIDMDRYKIIARNLCYHTKNLEVSQQIVE 122 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 EK+ + + + + VVLTTGTFLRG IHIG+ GR G+ P+ L + Sbjct: 123 SLVLEKDSVIGVKTTIGKVYQAKKVVLTTGTFLRGKIHIGENTSNNGRAGEPPAMELGEN 182 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR--------- 236 + D G LKTGT AR+ +I ++ EK + D +P F + K Sbjct: 183 LRELGLDVGILKTGTCARIKASSINFEILEKHYGD---MPAPFFSKKTQKELGENPFNPM 239 Query: 237 QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLE 296 Q+ C +T TN +TH II EN + +++G I+ GPRYCPSIEDK+ RF ++ HQ+FLE Sbjct: 240 QLPCYVTYTNAKTHAIIRENFHRAPMFTGQIEGIGPRYCPSIEDKVNRFSDKERHQLFLE 299 Query: 297 PEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLE 356 P+ L + Y NG++++LP ++Q I +I GLE I+R GYAIEYDYINP EL TLE Sbjct: 300 PQTLEANEYYINGLTSSLPFDVQEAMIHSIEGLENAEIVRYGYAIEYDYINPTELKHTLE 359 Query: 357 TKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 TKKI L+ AGQINGTTGYEEA AQG+ AGIN+A + I R ++YIGVM+DDL Sbjct: 360 TKKIRNLYCAGQINGTTGYEEAGAQGIFAGINAALSVKGKEQITLKRNEAYIGVMVDDLV 419 Query: 417 SKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAK---YIQE-YN 472 +KG EPYRMF+SRAEYR+ LR NA RL + LG + E K K I+E Sbjct: 420 TKGTKEPYRMFSSRAEYRLLLREGNAIFRLGDLAYSLGLMEEEEYKELQKDKVAIKEGLE 479 Query: 473 FLRSLL---KSLVLTSKN-LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF 528 +L++ +LVL N + IS K + T P CP A + Sbjct: 480 WLKNTEVTPNALVLKFLNSICEEKISDKTNWGTIVGRRSFDVPKLLKIQEVENCPFA-SY 538 Query: 529 SSLVIERLQIESSYAAYTGRQ--MIEA--KEIKFEEKRLIPKDFDYSSLPALSNELKEKL 584 S +E + +E+ Y Y +Q MIE K + E IP+DF + +P LS E+ EKL Sbjct: 539 SERALEEILVEAKYFNYIQKQQNMIENMDKMLSIE----IPQDFVFDKIPGLSLEVIEKL 594 Query: 585 SILKPFNLLQASKIEGMTPAALNLLLIYI 613 P +L +AS+I G+TPA+L +L +YI Sbjct: 595 KKFNPKSLFEASEISGVTPASLEVLQLYI 623 >gi|298243492|ref|ZP_06967299.1| glucose-inhibited division protein A [Ktedonobacter racemifer DSM 44963] gi|297556546|gb|EFH90410.1| glucose-inhibited division protein A [Ktedonobacter racemifer DSM 44963] Length = 686 Score = 489 bits (1259), Expect = e-136, Method: Compositional matrix adjust. Identities = 264/664 (39%), Positives = 390/664 (58%), Gaps = 57/664 (8%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCE+A +A++G T L+T ++ M CNP++GG KGHL++EIDAL Sbjct: 20 YDVIVVGAGHAGCESALASARMGLKTLLLTMNLDSVALMPCNPSMGGPAKGHLIKEIDAL 79 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G +GR D IQ R+LN KGPAV+ R Q D++ YRLAM+ + SQ NLD+ Q + Sbjct: 80 GGEIGRNTDRTFIQMRLLNTSKGPAVQALRAQCDKQAYRLAMKFVLESQPNLDLRQATIL 139 Query: 126 GF-----NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 + ++++ +V + +VV+TTGTF+ G + +G+ P GR G+ P+ Sbjct: 140 RLLSTQRDDGRHVMHGVVTSNGWEYHARSVVMTTGTFINGRLVVGEKTQPGGRAGEGPAL 199 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR---- 236 + +S + R KTGTP R+D +TI + KTE+Q IP F D Sbjct: 200 GISDSLRALGLEMRRFKTGTPPRIDARTIDFSKTERQPGS--TIPLYFSQDTEAREDIQV 257 Query: 237 ---------------------QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYC 275 Q+ C + RT TH+II +N+ S +Y+G I+ GPRYC Sbjct: 258 PGGKPNSVYPVLEEDLRGWRPQLPCYLVRTTERTHQIIRDNLHRSPLYTGIIEGVGPRYC 317 Query: 276 PSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNII 335 PSIEDKIVRF ++ HQIFLEPEG T VY G++T+LPE++Q + +R+IP LEK I+ Sbjct: 318 PSIEDKIVRFADKVSHQIFLEPEGWRTGEVYVQGMNTSLPEDVQLEMLRSIPALEKAEIM 377 Query: 336 RPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNK 395 R GYA+EYDY+ P +LFPTLETK ++GLFLAGQINGT+GYEEAAAQG++AGIN+A + Sbjct: 378 RVGYAVEYDYVLPTQLFPTLETKPVAGLFLAGQINGTSGYEEAAAQGIMAGINAALYARG 437 Query: 396 LDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGC 455 D R ++YIGV+IDDL ++ + EPYR+ TSRAE+R+ LRP++AD RL +LG Sbjct: 438 EDGFVLGRHEAYIGVLIDDLVTRPMSEPYRLHTSRAEHRLLLRPESADLRLGDHAYRLGM 497 Query: 456 IGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLS---STSISFKQDGKTRTAYEFLSYPD 512 IG+ R ++ + + +L+S+ TS ++ + ++ G+ +A E L P Sbjct: 498 IGDERYEQVVRKREAIQSTLEVLESVSFTSSRVTEQHAETLGIAPLGQKMSAKELLRRPA 557 Query: 513 ---FSIQNLFS------ICPDARKFSSLVI-----------ERLQIESSYAAYTGRQ-MI 551 F I L + D + +S + E ++++ Y Y +Q + Sbjct: 558 VKYFQIAQLSQRMVEERVSMDGAESASRIFMELTDLPEDTAEEVELQVKYENYVRKQEQL 617 Query: 552 EAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLI 611 + + EE R IP++ DY + L E ++KL +P + QAS++EG+TPA + +L++ Sbjct: 618 VRRTSRLEEMR-IPENLDYRDVQHLRTEARQKLLKTQPRTVGQASRVEGVTPADIAILMV 676 Query: 612 YIKK 615 YI+K Sbjct: 677 YIQK 680 >gi|292669285|ref|ZP_06602711.1| glucose inhibited division protein A [Selenomonas noxia ATCC 43541] gi|292649126|gb|EFF67098.1| glucose inhibited division protein A [Selenomonas noxia ATCC 43541] Length = 626 Score = 489 bits (1259), Expect = e-136, Method: Compositional matrix adjust. Identities = 274/626 (43%), Positives = 382/626 (61%), Gaps = 21/626 (3%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 N +YD+IVIG GHAG EAA AA++G T ++T I M CNP+IGG GK HLVREI Sbjct: 4 NTNYDIIVIGAGHAGVEAALAAARMGRRTLILTLSLDNIAMMPCNPSIGGPGKSHLVREI 63 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G MG AD A IQ R+LN KGPAV R QAD+ LY+ M+ + + ENL V Q Sbjct: 64 DALGGEMGIAADRASIQRRLLNTGKGPAVHALRMQADKFLYQRIMKETLENTENLHVRQL 123 Query: 123 EVAGFNTEKNI----ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSP 178 V +E++ ++ IV + + V+L TGT+LRG I +G+ +G G P Sbjct: 124 LVTELLSEEHAGEKRVTGIVCETGERLTARAVILATGTYLRGRIILGETIYDSGPNGQRP 183 Query: 179 SNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQI 238 S SL +S R KTGTPAR+D ++I + KT Q D FSF+T+++ Q Sbjct: 184 SMSLSDSLRAVGLKLMRFKTGTPARIDRRSIDFAKTSMQEGDPAAPAFSFLTNEMPAEQT 243 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C +T TN ETH +I N+ + + +G I+ GPRYCPS+E KI RF ++ HQ+FLEPE Sbjct: 244 PCWLTYTNEETHAVIRANLHRAPMANGVIEGIGPRYCPSVETKIARFPDKERHQLFLEPE 303 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL+T+ +Y G+ST+LP ++Q F+ TIPGLE I+RPGYAIEYD ++P +L TL K Sbjct: 304 GLHTNEMYVQGMSTSLPTDVQEAFLTTIPGLEHARIMRPGYAIEYDCLDPLQLEATLAVK 363 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I+GL+ AGQ NGT+GYEEAAAQGL+AGIN+AR + + R+D YIGV+IDDL +K Sbjct: 364 GIAGLYSAGQSNGTSGYEEAAAQGLIAGINAARSIGGEEPLVLRRSDGYIGVLIDDLVTK 423 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYRM TSRAEYR+ LR DNAD RLTP G +G + + R RF + +LL Sbjct: 424 GTEEPYRMMTSRAEYRLVLRQDNADLRLTPRGRAVGLVTDERWVRFTAKRDAIDAALALL 483 Query: 479 KSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL------- 531 + L+ S+ + + D L P S+ L S D R ++L Sbjct: 484 RERRLSP---SAETEALLADA----GISPLRVP-MSLFALLSREGDYRVLAALFDLPALA 535 Query: 532 --VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 V E ++I + Y Y +Q + ++ E R IP +FDY+++ +L E EKL+ ++P Sbjct: 536 DDVREEVEITARYDGYIRKQEEQIARMERLESRRIPAEFDYAAVTSLRLEAAEKLAAVRP 595 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKK 615 ++ QAS+I G++PA +++LL+Y+++ Sbjct: 596 RSIGQASRISGVSPADISVLLVYLER 621 >gi|159489444|ref|XP_001702707.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Chlamydomonas reinhardtii] gi|158280729|gb|EDP06486.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Chlamydomonas reinhardtii] Length = 625 Score = 489 bits (1259), Expect = e-136, Method: Compositional matrix adjust. Identities = 262/617 (42%), Positives = 374/617 (60%), Gaps = 10/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAA AA+LG T L+T IG CNPA+GG K LV E+DAL Sbjct: 4 YDVIVVGAGHAGCEAALAAARLGCRTLLLTLNLDRIGWQPCNPAVGGPAKSQLVHEVDAL 63 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G +G++AD +Q RVLN KGPAV R Q D++ Y +++ + NL++ + V Sbjct: 64 GGEIGKMADRCYLQKRVLNRSKGPAVWALRAQTDKQEYSRVIRKVLEETPNLEIREAMVV 123 Query: 126 GFNTEKN-IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 G + N + + VVLTTGTF+ G I +G+ + AGR G++ S L Sbjct: 124 GLDVGPNDQVRGVRTYFGITFAARAVVLTTGTFMNGTIWVGRQSMSAGRAGEAASVGLTE 183 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGIT 243 + + F+T RLKTGTPAR+D +T+ + E Q DE FSF + + Q+ C +T Sbjct: 184 ALQQLGFETDRLKTGTPARIDSRTVDFGALEPQPGDEDERWFSFDPEVHVPRPQLSCYLT 243 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 RT ETHR+I EN++ + IY G + S GPRYCPSIEDKIVRF +++ HQIFLEPEG +T Sbjct: 244 RTTAETHRLIRENLQETPIYGGWVDSKGPRYCPSIEDKIVRFADKDSHQIFLEPEGRDTP 303 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G ST LPE +Q ++T+PGL +V ++RP YA+EYDY+ + PTLETKKI GL Sbjct: 304 EMYVQGFSTGLPERLQLALLQTLPGLGRVKMLRPAYAVEYDYLPAHQCHPTLETKKIRGL 363 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F +GQ+NGTTGYEEAAAQGLVAG+N+A ++ + + R SY+G ++DDL +K + EP Sbjct: 364 FFSGQLNGTTGYEEAAAQGLVAGMNAALRAQERPPVALPRDSSYLGTLVDDLVTKDLREP 423 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRM TSR+EYR+ LR DNAD RLTP+G +G + +RR F ++ L + + Sbjct: 424 YRMLTSRSEYRLLLRSDNADRRLTPLGRDIGLVDDRRWALFTAKQARIEAEKARLGTTRV 483 Query: 484 TSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDAR---KFSSLVIERLQ 537 + + + S+S + T E L P L D +FS E ++ Sbjct: 484 RADSPVAAEAGSLSGHAVPGSPTLEELLRRPHVHYSVLERHGLDGGEQLRFSER--EAVE 541 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ YA + RQ + + + + +P D DYS++ LS E +EKL ++P ++ QAS+ Sbjct: 542 IDIKYAGFIARQEKQLASLASKASKPLPADLDYSAIATLSMEAREKLGKIRPRDIGQASR 601 Query: 598 IEGMTPAALNLLLIYIK 614 I G++PA ++ LL++++ Sbjct: 602 IGGVSPADVSALLVHLE 618 >gi|304413041|ref|ZP_07394514.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Candidatus Regiella insecticola LSR1] gi|304283884|gb|EFL92277.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Candidatus Regiella insecticola LSR1] Length = 597 Score = 489 bits (1258), Expect = e-136, Method: Compositional matrix adjust. Identities = 269/620 (43%), Positives = 374/620 (60%), Gaps = 58/620 (9%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDAL Sbjct: 7 FDVIIIGGGHAGTEAAMASARMGCQTLLLTHNIETLGEMSCNPAIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLMG+ E+L + Sbjct: 67 GGLMGKAI-------------------------------XXXXXXXXXXEDLII------ 89 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E N ++ V + R TV+LT GTFL G IHIG GR GD S +L + Sbjct: 90 ----ENNSVAGAVTKTGQRFRAKTVILTVGTFLDGKIHIGLENHSGGRAGDPASITLSHR 145 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR--QIECGIT 243 + RLKTGTP R+D KTI + + Q D + FSF+ D +T R QI C IT Sbjct: 146 LKELPLRVNRLKTGTPPRIDAKTIDFSQLTVQLGDTPIPNFSFL-DHLTQRPKQIACHIT 204 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH II N+ S +Y+G+I+ GPRYCPSIEDK+VRF +R+ HQIFLEPEGLN++ Sbjct: 205 HTNKKTHEIIRNNLDRSPMYTGEIEGIGPRYCPSIEDKVVRFADRDTHQIFLEPEGLNSN 264 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP + Q I +I G+E IIRPGYAIEYDY +P++L TLE+K + GL Sbjct: 265 EIYPNGISTSLPLDTQINLIHSIKGMENARIIRPGYAIEYDYFDPRDLKNTLESKHLHGL 324 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+AR + + R ++Y+GV++DDL++ G EP Sbjct: 325 FFAGQINGTTGYEEAAAQGLLAGLNAARLAKGKESWSPRRDEAYLGVLVDDLSTLGTKEP 384 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT IG LG + + R K + + +++ R L++ + Sbjct: 385 YRMFTSRAEYRLMLREDNADLRLTKIGRGLGLVDDDRWKHYCEKVEKIEKERQRLRNTWV 444 Query: 484 TSKN--------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIER 535 + + L T +S + +G+ ++Y + + NLF P + + + + Sbjct: 445 SPHSPHITQLNKLLKTPLSKEANGEELLRRPEINYHNLTALNLFG--PALQDYQAAA--Q 500 Query: 536 LQIESSYAAYTGRQMIE-AKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 ++I++ Y Y RQ E K+++ E +L + +Y +P LSNE+ KL+ KP ++ Q Sbjct: 501 VEIQTKYQGYIERQQEEITKQLRNENTKL-SINTNYHEIPGLSNEVIAKLNDHKPHSIGQ 559 Query: 595 ASKIEGMTPAALNLLLIYIK 614 AS+I G+TPAA+++LLI++K Sbjct: 560 ASRISGITPAAISILLIWLK 579 >gi|41058547|gb|AAR99253.1| glucose-inhibited division protein A [Candidatus Blochmannia sansabeanus] Length = 591 Score = 489 bits (1258), Expect = e-136, Method: Compositional matrix adjust. Identities = 277/591 (46%), Positives = 377/591 (63%), Gaps = 25/591 (4%) Query: 41 IGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADR 100 +G MSCNPAIGG+GKGHLV+EID++ G M D AGIQFR+LN KG AVRG R QAD+ Sbjct: 1 LGQMSCNPAIGGIGKGHLVKEIDSMGGAMAYAIDNAGIQFRILNKSKGAAVRGTRAQADK 60 Query: 101 ELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSM-IRCSTVVLTTGTFLR 159 LYR ++ + Q+ L +IQ V KN I + + M I ++VVLTTGTFL Sbjct: 61 MLYRQMIRNVLEYQDFLLIIQASVEDLIISKNKIVGVFVPKIGMKINATSVVLTTGTFLN 120 Query: 160 GVIHIGKLKIPAGRMGDSPSNSLFNSFMK-FDFDTGRLKTGTPARLDGKTIIWDKTEKQF 218 G +HIG GR GD S+SL + +K F GRLKTGT R+ K I +D + Q+ Sbjct: 121 GKMHIGMNNFIGGRAGDIESSSLLSKRLKEFSLRVGRLKTGTSPRVHSKGINFDVLQAQY 180 Query: 219 ADERLIPFSFM-TDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPS 277 +D + FSF+ ++K +Q+ C IT TN +TH I+ N+ S I +G I+ PRYCPS Sbjct: 181 SDNPVPVFSFIGSEKQHPKQVPCYITYTNDKTHEIVRSNLNQSPIQTGLIEGTAPRYCPS 240 Query: 278 IEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRP 337 IEDK+ RF +RN HQIFLEPEGL T +Y NGIST+LP +Q Q I++I GLE +IIRP Sbjct: 241 IEDKVTRFSDRNAHQIFLEPEGLTTSEIYLNGISTSLPFYVQIQIIQSIQGLENAHIIRP 300 Query: 338 GYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLD 397 GYAIEYD+ +P++L TLE+K ISGLF +GQINGTTGYEEAAAQGL+AGIN+AR S + Sbjct: 301 GYAIEYDFFDPRDLKLTLESKFISGLFFSGQINGTTGYEEAAAQGLLAGINAARFSQNKE 360 Query: 398 CICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIG 457 R +Y+GV++DDL + G EPYRMFTSRAEYR+SLR DNAD RLT I +LG + Sbjct: 361 GWYPRRDQAYLGVLVDDLCTHGTEEPYRMFTSRAEYRLSLREDNADLRLTAIARQLGLVD 420 Query: 458 ERRQKRFAKYIQEYNFLRSLLKSLVLT-----SKNLSS---TSISFKQDGKTRTAYEFLS 509 E R K F + R L++ + +K L+S T + ++ G+ E L Sbjct: 421 ELRWKNFCLKKENIEKERQRLRNTYIVPYSTDAKQLNSFIKTPLIYEVSGE-----ELLR 475 Query: 510 YPDFSIQNLFSICPDARKFSSLVIER-----LQIESSYAAYTGRQMIEAKEIKFEEKRLI 564 P+ + NLF + + FSS +++R ++I+ Y Y Q E + + E L+ Sbjct: 476 RPEINYTNLFKL----KSFSSFMLDRQVYEQIEIQIKYEGYIRHQQKEIERNIYNEHILL 531 Query: 565 PKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 P + DY+ + LS E+ +KL+ KP+++ QAS+I G+TPAA++ LL+++KK Sbjct: 532 PTNIDYNIISGLSKEVIDKLNDYKPYSIGQASRISGITPAAISNLLVWLKK 582 >gi|291277040|ref|YP_003516812.1| glucose inhibited division protein A [Helicobacter mustelae 12198] gi|290964234|emb|CBG40083.1| glucose inhibited division protein A homolog [Helicobacter mustelae 12198] Length = 632 Score = 489 bits (1258), Expect = e-136, Method: Compositional matrix adjust. Identities = 269/632 (42%), Positives = 368/632 (58%), Gaps = 19/632 (3%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R +DV+VIGGGHAG EA+ ++A++GA T L+T IG SCNPAIGGLGKGHLV+E+D Sbjct: 3 REWDVLVIGGGHAGIEASCISARMGARTHLLTMLIENIGLASCNPAIGGLGKGHLVKEVD 62 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G+MGR++D +GIQ+R+LN KGPAVRG R Q D + YR+ + +L NL V Q Sbjct: 63 ALGGVMGRLSDKSGIQYRILNASKGPAVRGTRAQIDMDAYRIHARNHVLHTPNLSVSQEV 122 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E I + V++TTGTFLRG++HIG+ + GR G+ +N L Sbjct: 123 VEELLVEDGKIKGVKTNIGKCYFAKKVIITTGTFLRGLVHIGESQSQNGRFGEDSANKLS 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 S + F+ GRLKTGT R+DG++I + E DE FS+ T Q+ C +T Sbjct: 183 LSLKELGFELGRLKTGTCPRIDGRSIDFSGLEIHHGDEIPPHFSYHTKDFAPSQLPCFVT 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH II +N + +++G I+ GPRYCPSIEDK+ RF + HQ+FLEP+ + Sbjct: 243 YTNAKTHEIIAQNFHRAPLFTGQIEGVGPRYCPSIEDKVHRFASKERHQLFLEPQTRDGV 302 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 Y NG+ST+LP +IQ I +I GLE I R GYAIEYDY NP L+ TLET+ ISGL Sbjct: 303 EYYVNGLSTSLPYDIQELVIHSIAGLENARITRYGYAIEYDYCNPTALYHTLETRLISGL 362 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSA------RKSNKLDCICFSRTDSYIGVMIDDLTS 417 + AGQINGTTGYEEAAAQG++AGIN+ + ++ + R + YIGVMIDDL + Sbjct: 363 YFAGQINGTTGYEEAAAQGIMAGINAVLSLEGNAQKFGMEQLVLRRDEGYIGVMIDDLVT 422 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL 477 KG EPYR+FTSRAEYR+ LR DNA RL +LG + E + K ++ + Sbjct: 423 KGTNEPYRVFTSRAEYRLLLREDNALFRLGKYAYRLGLMEEEDYQMLQKDQEDIDRGMEF 482 Query: 478 LKSLVLTS--------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFS 529 L LT + + I K + S F + + F + FS Sbjct: 483 LTKKTLTPSKETLALLEKIHEAPIVDKCSAVLVAGRDSFSEEKFDVLDEF-----FKDFS 537 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 +L+I Y AY +Q ++++ + IP DF + + LS E+ EKL++ +P Sbjct: 538 LRARSQLRILCKYDAYIEKQKQSVEQMEEMLRIKIPGDFVFEGIAGLSLEVVEKLNLHRP 597 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKKNTVKLN 621 L A I G+TPA+L +L +YI + K N Sbjct: 598 ATLFHAKNISGITPASLEVLHLYIHLHHKKSN 629 >gi|227508119|ref|ZP_03938168.1| glucose-inhibited division protein A [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227192348|gb|EEI72415.1| glucose-inhibited division protein A [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 645 Score = 489 bits (1258), Expect = e-136, Method: Compositional matrix adjust. Identities = 260/626 (41%), Positives = 374/626 (59%), Gaps = 14/626 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+G GHAGCEAA AA++G T ++T + M CNP++GG KG +VRE+D Sbjct: 16 KNYDVIVVGAGHAGCEAALAAARMGNKTLVLTINLDMVAFMPCNPSVGGPAKGTVVREVD 75 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G MGR D +Q R+LN KGPAV+ R QAD+ Y M+ + ++ NL + Q Sbjct: 76 ALGGEMGRNIDKTYVQMRMLNTGKGPAVQALRAQADKHAYHAEMKHTMENEPNLTLRQAI 135 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + ++ + +VV+ GT RG I IG+L +G P+ L Sbjct: 136 VDSLIVEDGVCKGVITNTGAKYFAKSVVIAAGTAARGKIIIGELMYASGPNNSQPAEKLS 195 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSF-MTDK---ITNRQIE 239 S + FD R KTGTP R+DG TI + KTE+Q DE+ FSF +DK Q+ Sbjct: 196 GSLEELGFDLERFKTGTPPRVDGTTIDYSKTEEQPGDEKPHHFSFESSDKDYLAVKDQLS 255 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +T TN TH+II EN+ + +++G I+ GPRYCPSIEDKIVRF +++ HQ+FLEPEG Sbjct: 256 CWLTYTNETTHKIIRENLDRAPMFTGVIEGVGPRYCPSIEDKIVRFADKSRHQLFLEPEG 315 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 T+ Y +G+ST++PEE+Q Q + TI GLE ++RPGYAIEYD + P +L PTLETK Sbjct: 316 RKTEEWYVDGLSTSMPEEVQQQMLHTISGLENAEMMRPGYAIEYDVVAPYQLKPTLETKI 375 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 + LF AGQ NGT+GYEEAA QG++AGIN+ R++ R ++YIGVMIDDL +KG Sbjct: 376 VKNLFTAGQTNGTSGYEEAAGQGIIAGINAGRRALGQGPFVLKRNEAYIGVMIDDLVTKG 435 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRS--- 476 EPYR+ TSRAEYR+ LR DNAD RLT G ++G I + +R+A+++ + + S Sbjct: 436 TKEPYRLLTSRAEYRLLLRTDNADMRLTEKGHEIGLISD---ERYAQFLSKKRAIESEID 492 Query: 477 LLKSLVLTSKNLSSTSISFKQDGKTRT---AYEFLSYPDFSIQNLFSICPDA-RKFSSLV 532 L S+ + + + + D + A FL P Q L D V Sbjct: 493 RLNSIRIKPSDAVNKFVEAHGDKPLKDGVIASVFLRRPYVDYQTLLQFISDPEHHLDRHV 552 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 IE+++I++ YA Y + +++K E + IP DY ++ ++ E ++KL + P + Sbjct: 553 IEQVEIQTKYAGYIAKAESSVEKMKRMEAKKIPNRIDYEAIDGIATEARQKLQKIHPETI 612 Query: 593 LQASKIEGMTPAALNLLLIYIKKNTV 618 QAS+I G+ PA + +L +YI++ + Sbjct: 613 AQASRISGVNPADIAILSVYIQQGKI 638 >gi|194216193|ref|XP_001914686.1| PREDICTED: similar to mitochondrial translation optimization 1 homolog isoform b (predicted) [Equus caballus] Length = 689 Score = 489 bits (1258), Expect = e-136, Method: Compositional matrix adjust. Identities = 267/612 (43%), Positives = 385/612 (62%), Gaps = 25/612 (4%) Query: 29 ASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKG 88 S L+TH+ IG MSCNP+ GG+GKGHL+RE+DALDGL R+ D +G+ ++VLN +KG Sbjct: 58 GSRLLLTHRADVIGQMSCNPSFGGIGKGHLMREVDALDGLCCRICDQSGVHYKVLNRRKG 117 Query: 89 PAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGF--------NTEKNIISSIVMQ 140 PAV G R Q DR+LY+ MQ+EIL+ L V +G V +T K + +V+ Sbjct: 118 PAVWGLRAQIDRKLYKQNMQKEILNTPLLTVQEGAVEDLILTEPEPEHTGKCRVHGVVLV 177 Query: 141 DNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGT 200 D S + +V+LTTGTFLRGV+ IG PAGR+GD PS L + + F GRLKTGT Sbjct: 178 DGSTVFAESVILTTGTFLRGVMVIGLEMHPAGRLGDQPSIGLAQTLERLGFVVGRLKTGT 237 Query: 201 PARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR---QIECGITRTNLETHRIIMENI 257 P R+ ++I + KQ D PFSF+ + + + Q+ C +T TN I+++N+ Sbjct: 238 PPRIAKESINFSILNKQTPDNPPTPFSFIHETVWIKPEDQLPCYLTHTNPRVDEIVLQNL 297 Query: 258 KHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEE 317 ++ + GPRYCPSIE K++RF R HQ++LEPEGL++ ++YP G+S LP E Sbjct: 298 HLNSHVKETTR--GPRYCPSIESKVLRFPNRL-HQVWLEPEGLDSGLIYPQGLSVTLPAE 354 Query: 318 IQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEE 377 +Q + I I GLEK +++PGY ++YDY++P+++ P+LET + LF AGQINGTTGYEE Sbjct: 355 LQEKMITCIRGLEKAKMVQPGYGVQYDYLDPRQITPSLETHLVQRLFFAGQINGTTGYEE 414 Query: 378 AAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISL 437 AAAQG++AGIN++ + + SRT+ YIGV+IDDLT+ G EPYRMFTSRAE+R+SL Sbjct: 415 AAAQGVIAGINASLRVRRQPPFIISRTEGYIGVLIDDLTTLGTNEPYRMFTSRAEFRLSL 474 Query: 438 RPDNADNRLTPIGMK-LGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS----KNLSSTS 492 RPDNAD+RLT G K GC+ ++R +R + S+LKS+ +S K + S Sbjct: 475 RPDNADSRLTFRGYKEAGCVSQQRYERASWMKSSLEEGISVLKSIEFSSSKWKKLIPEAS 534 Query: 493 ISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA-RKFSSL--VIERLQIESSYAAYTGRQ 549 IS + R A + L Y + ++ L P+ +K++ + +RL+IE++Y + Q Sbjct: 535 ISVSKSLPLR-ALDVLKYEEVDMEVLAKAIPEPLKKYTECRELAKRLKIEATYESVLFHQ 593 Query: 550 MIEAKEIKFEEKRLIPKDFDYSSLP--ALSNELKEKLSILKPFNLLQASKIEGMTPAALN 607 E KE++ E +P+D DY +L +LS E++EKL +P + AS+I G+TPAAL Sbjct: 594 QQEIKEVQRNEALQLPEDLDYLTLRDVSLSYEVREKLQFSRPLTIGAASRIPGVTPAALI 653 Query: 608 LLLIYIKKNTVK 619 LL ++K K Sbjct: 654 NLLRFVKTTQQK 665 >gi|33862231|ref|NP_893792.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|81170571|sp|Q7TU19|MNMG_PROMP RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|33634449|emb|CAE20134.1| Glucose inhibited division protein A [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 654 Score = 488 bits (1257), Expect = e-136, Method: Compositional matrix adjust. Identities = 278/637 (43%), Positives = 371/637 (58%), Gaps = 24/637 (3%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 N S+D+IVIGGGHAGCEAA AKLG STAL T I CNPA+GG K LV EI Sbjct: 8 NESFDIIVIGGGHAGCEAAITTAKLGFSTALFTINLDRIAWQPCNPAVGGPAKSQLVHEI 67 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G++G++AD IQ R+LN +GPAV R Q D+ Y M + + +NL + + Sbjct: 68 DALGGIIGQLADETAIQKRILNASRGPAVWALRAQTDKREYSKRMIEILQNTDNLSLKEA 127 Query: 123 EVAGFN-TEKNIISSIVMQDNSMIR-----------CSTVVLTTGTFLRGVIHIGKLKIP 170 + E S+ + I+ ++++T GTFL G I IG + Sbjct: 128 MITELVIKEAETFSNNLKNKTKKIKGVKTFFGTYYYAKSIIITAGTFLEGRIWIGNKSMS 187 Query: 171 AGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT 230 AGR G+ + L S T RLKTGTPAR+D K+I +D+ + Q + FSF Sbjct: 188 AGRSGEQAAQGLTQSLHNLGIKTERLKTGTPARVDKKSISFDELDIQPSTASDKYFSF-D 246 Query: 231 DKITNR--QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGER 288 KI N Q+ C ITRT L+TH +I N+ + IY G I S GPRYCPSIEDKIV+F ++ Sbjct: 247 PKIKNNMPQVSCHITRTTLKTHELIRNNLHLTPIYGGFIDSKGPRYCPSIEDKIVKFADK 306 Query: 289 NGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINP 348 N HQIFLEPEG+NT +Y G ST LPE IQ +RT+PGL K ++RP YA+EY+YI Sbjct: 307 NSHQIFLEPEGINTPEIYVQGFSTGLPENIQLDLLRTLPGLNKCKMLRPAYAVEYEYIPA 366 Query: 349 KELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYI 408 +L +LET +I LF AGQINGTTGYEEAAAQGLVAGIN+ RK N D I FSR SYI Sbjct: 367 TQLKSSLETIEIENLFSAGQINGTTGYEEAAAQGLVAGINATRKLNMKDPIIFSRESSYI 426 Query: 409 GVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR---QKRFA 465 G MI+DL ++ + EPYR+ TSR+EYR++LR DNAD RLTP+G ++G I ERR K+ Sbjct: 427 GTMINDLITRDLKEPYRVLTSRSEYRLTLRGDNADRRLTPLGFEIGLIDERRWLAHKKKM 486 Query: 466 KYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTR---TAYEFLSYPDFSIQNLFSIC 522 K ++E N S L++ L + + I K + T E L P+ + Sbjct: 487 KSLKEEN---SRLENTRLKCTDEIAKKIELDSGSKIKGSTTLKELLKRPNLHYSDFIRYD 543 Query: 523 PDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKE 582 + VIE ++I+ Y Y RQ +I + + + + +Y + LS E +E Sbjct: 544 LVDKTLPISVIEGVEIDIKYEGYLKRQKNNIDQINRQSLKSLSSEINYDQIDTLSLEARE 603 Query: 583 KLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 L+ +KP N ASKI G++ A L LL+++K +K Sbjct: 604 NLNKIKPTNFGDASKIPGVSKADLTALLVWLKIKELK 640 >gi|81301232|ref|YP_401440.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Synechococcus elongatus PCC 7942] gi|123556262|sp|Q31KG6|MNMG_SYNE7 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|81170113|gb|ABB58453.1| glucose inhibited division protein A [Synechococcus elongatus PCC 7942] Length = 635 Score = 488 bits (1257), Expect = e-136, Method: Compositional matrix adjust. Identities = 260/617 (42%), Positives = 370/617 (59%), Gaps = 11/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIG GHAGCEAA AA+LG T L+T IG CNPA+GG K L E+DAL Sbjct: 7 FDVIVIGAGHAGCEAALAAARLGCQTLLLTLNLDRIGWQPCNPAVGGPAKSQLAHEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G +G++AD +Q RVLN +GPAV R Q D+ Y +++ + Q NL + +G V Sbjct: 67 GGEIGKMADRTYLQKRVLNASRGPAVWALRAQTDKREYAAVIKQVLEQQPNLRLREGMVT 126 Query: 126 ----GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G N E + + S R V+LTTGTFL G I +G +PAGR G+ + Sbjct: 127 DLLIGPNDE---VQGVTTYFGSSFRAKAVILTTGTFLGGCIWVGNKSMPAGRAGEFAAVG 183 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIEC 240 L + + F+T RLKTGTPAR+D +++ + + E Q D + FSF + R Q+ C Sbjct: 184 LTETLQRLGFETDRLKTGTPARVDKRSVDYSRLEPQPGDPEVRWFSFDPEAWVEREQLPC 243 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +TRT ETH++I +N+ + +Y G I + GPRYCPSIEDKIVRF ++ HQIF+EPEG Sbjct: 244 YLTRTTAETHKLIRDNLHLTPVYGGYIDAKGPRYCPSIEDKIVRFADKESHQIFIEPEGR 303 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + +Y G ST LPE++Q ++T+PGLE ++RP YA+EYDY+ + PTL T+++ Sbjct: 304 DIPELYIQGFSTGLPEDLQLALLQTLPGLEDCVMLRPAYAVEYDYLPATQCLPTLMTRRV 363 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQ+NGTTGYEEAAAQG+VAGIN+AR D I F R SYIG +IDDL +K + Sbjct: 364 EGLFSAGQLNGTTGYEEAAAQGIVAGINAARFVQGQDAIVFPREGSYIGTLIDDLCTKDL 423 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYR+ TSR+EYR+ LR DNAD R+TP+G ++G I +RR F + ++ L Sbjct: 424 REPYRVLTSRSEYRLLLRADNADQRMTPLGREIGLIDDRRWALFEQKQARIAAEQTRLTQ 483 Query: 481 LVLTSKNLSSTSISFKQDGKTR---TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 + + +I+ + + T + L P+F +L + + E + Sbjct: 484 QRVKEHDPVGQAIAQQTQAPIKGSATLADLLRRPNFHYIDLEAHGLGDPSLAIAEKEGAE 543 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I YA Y RQ + ++ + +R +P D DYS++ ++ E +EKL+ +P L QAS+ Sbjct: 544 IAIKYAGYLQRQQAQVDQVVRQSQRPLPVDLDYSAITSMRLEAREKLARFRPLTLGQASR 603 Query: 598 IEGMTPAALNLLLIYIK 614 I G+ PA +N LLI+++ Sbjct: 604 IGGVNPADINALLIWLE 620 >gi|149369360|ref|ZP_01889212.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [unidentified eubacterium SCB49] gi|149356787|gb|EDM45342.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [unidentified eubacterium SCB49] Length = 623 Score = 488 bits (1257), Expect = e-136, Method: Compositional matrix adjust. Identities = 279/634 (44%), Positives = 393/634 (61%), Gaps = 30/634 (4%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M ++ YDVIV+G GHAG EAAA AA +GAST LIT IG MSCNPA+GG+ KG +VR Sbjct: 1 MFDKIYDVIVVGAGHAGGEAAASAANMGASTLLITMNLQNIGQMSCNPAMGGIAKGQIVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADR----ELYRLAMQREILSQEN 116 EIDAL G G ++D IQF++LN KGPA+ PR Q+DR E +RL ++R N Sbjct: 61 EIDALGGYSGIISDDTAIQFKMLNKSKGPAMWSPRVQSDRMRFSEAWRLKLER----TPN 116 Query: 117 LDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGD 176 LD Q VAG E + I+ + +R +VVLT GTFL G+IHIG + GR G+ Sbjct: 117 LDFYQEMVAGIVVEDSKIAGVKTSLGLTVRGKSVVLTNGTFLNGLIHIGDKQFGGGRAGE 176 Query: 177 SPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITN 235 S + + F+TGR+KTGTP R+DG+++ + K Q D FS+ + K Sbjct: 177 RASTGITKELVDLGFETGRMKTGTPPRVDGRSLDFSKMIVQPGDVNPEKFSYSSSTKPLT 236 Query: 236 RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFL 295 +Q +C +T T+ + H ++ E S +++G I+S GPRYCPSIEDKI RF +++ HQ+F+ Sbjct: 237 KQRDCHLTYTSPQVHDMLKEGFDRSPMFNGTIESLGPRYCPSIEDKINRFADKDRHQLFV 296 Query: 296 EPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTL 355 EPEG +T Y NG ST+LPE+IQ + +R + G E V RPGYAIEYDY P +L TL Sbjct: 297 EPEGWDTVEYYINGFSTSLPEDIQFKALREVAGFENVKFFRPGYAIEYDYFPPTQLKHTL 356 Query: 356 ETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDL 415 ETK ++GLF AGQINGTTGYEEAA+QGL+AGIN+A + D R ++YIGV++DDL Sbjct: 357 ETKLVAGLFFAGQINGTTGYEEAASQGLMAGINAALLVQEKDPFILKRNEAYIGVLVDDL 416 Query: 416 TSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR-------QKRFAKYI 468 +KG EPYRMFTSRAEYR LR DNAD RLTP G +LG E R QK+ ++ Sbjct: 417 ITKGTEEPYRMFTSRAEYRTLLRQDNADFRLTPKGFELGLASEDRLREMEIKQKKSDAFV 476 Query: 469 QEYNFLRSLLKSLVLTSKNLSS--TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICP--- 523 NF + S + + L + +++ + D R+ S P+ ++ ++ I Sbjct: 477 ---NFFTTTSVSHEVINPILEAKKSALVSQSDKMIRS----FSRPNITMDDMRKIAAVEE 529 Query: 524 --DARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELK 581 +A + + V+++ +I+ YA Y ++ A ++ E IP +FDYS L +LS E + Sbjct: 530 YINANELDTEVLQQAEIQVKYAGYIAKEKNNADKLNRLEGIKIPDNFDYSKLKSLSFEAR 589 Query: 582 EKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 EKL+ +KP + QAS+I G++P +++LL+Y+ + Sbjct: 590 EKLTKIKPVTVSQASRISGVSPNDISVLLVYMGR 623 >gi|295094323|emb|CBK83414.1| glucose-inhibited division protein A [Coprococcus sp. ART55/1] Length = 621 Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust. Identities = 266/622 (42%), Positives = 374/622 (60%), Gaps = 21/622 (3%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 ++N YDV+V+G GHAGCEAA +A+LG +T + T ++ M CNP +GG KGHLVR Sbjct: 3 VLNEEYDVVVVGAGHAGCEAALASARLGLNTIIFTVSMDSVAMMPCNPNVGGSSKGHLVR 62 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G MG+ D IQ ++LN KGPAV R QAD+ Y M+ + + +NL + Sbjct: 63 EIDALGGEMGKNIDKTYIQSKMLNASKGPAVHSLRAQADKANYSRTMKHTLENTDNLTLR 122 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q EV+ E N++ + + VVL TGT+L+ G + G G +N Sbjct: 123 QAEVSEIIIEDNVVKGVKTYSGATYFAKAVVLCTGTYLKARCIYGDVVYHTGPNGLMAAN 182 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK--ITNRQI 238 L +S + R KTGTPARLD +TI + + E+Q DE+++PFSF + I QI Sbjct: 183 YLSDSMKNAGIEIRRFKTGTPARLDKRTIDFSQMEEQKGDEKIVPFSFTNTEADIRRDQI 242 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C + TN +TH II +NI S ++SG I+ GPRYCPSIEDK+ +F ++ HQIF+EPE Sbjct: 243 SCWLCYTNEKTHEIIRDNIDRSPLFSGVIEGTGPRYCPSIEDKVTKFPDKTRHQIFIEPE 302 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 G T+ +Y G+S++LPE++Q++ I ++ GLE IIR YAIEYD IN L P+LE K Sbjct: 303 GEYTNEMYMGGMSSSLPEDVQYEMIHSMKGLENAKIIRNAYAIEYDCINAINLKPSLEFK 362 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 +SGLF AGQING++GYEEAAAQG++AGIN+ARK + + R+ +YIGV+IDDL +K Sbjct: 363 SVSGLFGAGQINGSSGYEEAAAQGIMAGINAARKVQGKEAVVLDRSQAYIGVLIDDLVTK 422 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQE-YNFLRSL 477 EPYRM TSRAEYR+ LR DNAD RLT IG ++G I ++R F K Q+ + ++ L Sbjct: 423 ETSEPYRMMTSRAEYRLLLRQDNADLRLTEIGHEIGLIDDKRYAAFTKKRQQIMDEIQRL 482 Query: 478 LKSLVLTS-------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS 530 ++V + +NL ST + + E + P+ S + + I K Sbjct: 483 ESTMVGANSTIQKFLENLGSTGLK-----TAASLAELIRRPELSYEAIDPIDEGITKLPD 537 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 VIE++ I Y Y RQ + + K EK+ +P D DY+ + L E ++KLS+++P Sbjct: 538 DVIEQINITIKYQGYIDRQNQQVNQFKKLEKKKLPADIDYNDISNLRIEARQKLSLIRPE 597 Query: 591 NLLQASKIEGMTPAALNLLLIY 612 N+ QAS+I G L LIY Sbjct: 598 NIGQASRISGF------LRLIY 613 >gi|163789247|ref|ZP_02183689.1| glucose-inhibited division protein A [Flavobacteriales bacterium ALC-1] gi|159875462|gb|EDP69524.1| glucose-inhibited division protein A [Flavobacteriales bacterium ALC-1] Length = 623 Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust. Identities = 277/639 (43%), Positives = 386/639 (60%), Gaps = 44/639 (6%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M N YDVIV+G GHAG EAAA +A +G+ T LIT I MSCNPA+GG+ KG +VR Sbjct: 1 MFNDVYDVIVVGAGHAGSEAAAASANMGSKTLLITMNLQNIAQMSCNPAMGGIAKGQIVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADR----ELYRLAMQREILSQEN 116 EIDAL G G V+D + IQF++LN KGPA+ PR Q+DR E +RL ++ N Sbjct: 61 EIDALGGYSGIVSDTSAIQFKMLNKSKGPAMWSPRVQSDRMRFAEDWRLLLE----GTPN 116 Query: 117 LDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGD 176 LD Q V+G E + + + ++ TVVLT GTFL G+IHIG GR G+ Sbjct: 117 LDFYQEMVSGLIVENHKVVGVKTSLGIEVKAKTVVLTNGTFLNGLIHIGDKNFGGGRAGE 176 Query: 177 SPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITN 235 + + + FD+GR+KTGTP R+DG+++ + K +Q DE FS++ K Sbjct: 177 RAATGITEQLVNLGFDSGRMKTGTPPRVDGRSLDYSKMIEQPGDENPEKFSYLDITKPLQ 236 Query: 236 RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFL 295 Q C +T T+ + H ++ E S +++G IKS GPRYCPSIEDKI RF +++ HQ+F+ Sbjct: 237 EQRSCHMTYTSEQVHDLLREGFDRSPMFNGRIKSVGPRYCPSIEDKINRFADKDRHQLFV 296 Query: 296 EPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTL 355 EPEG NT VY NG ST+LPE++Q + +R++ G E V RPGYAIEYDY P +L TL Sbjct: 297 EPEGWNTCEVYVNGFSTSLPEDVQFKALRSVVGFENVKFFRPGYAIEYDYFPPTQLKHTL 356 Query: 356 ETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDL 415 ETK + GL+ AGQINGTTGYEEAA+QGL+AGIN++ K + + R ++YIGV+IDDL Sbjct: 357 ETKLVDGLYFAGQINGTTGYEEAASQGLMAGINASLKVQEREVFTLKRDEAYIGVLIDDL 416 Query: 416 TSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLR 475 +KG EPYRMFTSRAEYR LR DNAD RLTP G ++G +RR R + + + Sbjct: 417 ITKGTEEPYRMFTSRAEYRTLLRQDNADFRLTPKGYEIGLATKRRLSRMEEKQSKSDAFV 476 Query: 476 SLLKSL---------VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDAR 526 K VL +KN S KQ K ++ + P+ + Q D R Sbjct: 477 QFFKDTSVKPEEANPVLEAKNSSPV----KQQDK---MFKLFARPNITTQ-------DVR 522 Query: 527 KFSSL------------VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLP 574 KF+++ VIE+ +I+ YA Y ++ A ++ E IP DFDY+ L Sbjct: 523 KFNAVERYIQDNNLDTEVIEQTEIQVKYAGYIEKEKNNADKLNRLENLKIPVDFDYNKLK 582 Query: 575 ALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYI 613 ++S E ++KL+ ++P + QAS+I G++P +++LL+Y+ Sbjct: 583 SMSMEARQKLTEIQPVTISQASRISGVSPNDISVLLVYL 621 >gi|218438725|ref|YP_002377054.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cyanothece sp. PCC 7424] gi|218171453|gb|ACK70186.1| glucose inhibited division protein A [Cyanothece sp. PCC 7424] Length = 634 Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust. Identities = 266/624 (42%), Positives = 374/624 (59%), Gaps = 23/624 (3%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 S+D+IV+G GH+GCEAA A+LG T ++T I CNPA+GG K L E+DA Sbjct: 12 SFDLIVVGAGHSGCEAALATARLGCRTLMLTLNLDKIAWQPCNPAVGGPAKSQLTHEVDA 71 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G +G++AD +Q R+LN +GPAV R Q D+ Y M++ + +QENL + +G Sbjct: 72 LGGEIGKMADRTYLQKRILNASRGPAVWALRAQTDKREYAAVMKQIVENQENLVIREGMA 131 Query: 125 AGFNTEKNI-ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 KN + + + V+LTTGTFL G I IG + AGR G+ + L Sbjct: 132 TDLVLGKNDEVIGVQTYFGTCFAAKAVILTTGTFLGGRIWIGGKSMAAGRAGEFAAVGLT 191 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGI 242 + + F+TGRLKTGTPAR+D +++ + K E Q DE++ FSF + R Q+ C + Sbjct: 192 ETLNQLGFETGRLKTGTPARVDKRSVDYSKLEPQPPDEQVGWFSFDPEVWVEREQMNCYL 251 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 TRT +TH++I +N+ S IY G I S GPRYCPSIEDKIVRF ++ HQIF+EPEG + Sbjct: 252 TRTTAKTHQLIRDNLHLSPIYGGFIDSKGPRYCPSIEDKIVRFADKESHQIFIEPEGRDI 311 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +Y G ST LPE IQ + T+PGLE ++RP YA+EYDY+ + +PTL TKKI G Sbjct: 312 PELYIQGFSTGLPENIQLAMLHTLPGLENCVMLRPAYAVEYDYLPATQCYPTLMTKKIEG 371 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQ+NGTTGYEEAAAQG+VAGIN+ R I F R +SYIG ++DDL +K + E Sbjct: 372 LFCAGQVNGTTGYEEAAAQGIVAGINAVRFIKGQSMIVFPREESYIGTLVDDLCTKDLRE 431 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR----QKRFAKYIQEYNFLR--- 475 PYRM TSR+EYR+ LR DNAD RLTP+G ++G I +RR Q++ A I E L Sbjct: 432 PYRMLTSRSEYRLILRSDNADQRLTPLGREIGLIDDRRWQLFQQKQANIIAEKERLHETR 491 Query: 476 -----SLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS 530 L K++V + SI D R + +++ + + NL ++ P + Sbjct: 492 IKENDELGKAIVADTGQKIKGSICLA-DLLRRPGFHYVNLEHYGLGNL-NLTPAEK---- 545 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 E +I+ Y+ Y RQ + ++I R + ++ DY + LS E +EKL+ +KP Sbjct: 546 ---EGAEIDIKYSGYIKRQQNQIEQISRHSHRPLSENLDYMKIDTLSMEAREKLTKVKPL 602 Query: 591 NLLQASKIEGMTPAALNLLLIYIK 614 + QAS+I G+ PA +N LL+Y++ Sbjct: 603 TIGQASRIGGVNPADINALLVYLE 626 >gi|163791743|ref|ZP_02186130.1| glucose-inhibited division protein A [Carnobacterium sp. AT7] gi|159872985|gb|EDP67102.1| glucose-inhibited division protein A [Carnobacterium sp. AT7] Length = 631 Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust. Identities = 267/621 (42%), Positives = 378/621 (60%), Gaps = 9/621 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+G GHAG EAA AA++G+ T LIT + M CNP+IGG KG +VREIDA Sbjct: 8 NFDVIVVGAGHAGSEAALAAARMGSQTLLITINLDMVAFMPCNPSIGGPAKGVVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ +Y M++ I ENL + QG Sbjct: 68 LGGEMGRNIDKTYIQMRMLNTGKGPAVRALRAQADKFMYANEMKKTIEETENLVLRQGIA 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E I I+ ++ R V+LT GT RG I IG+LK +G PS L Sbjct: 128 DELIIEDGICKGIITNTGAIYRSKAVILTAGTSSRGQIIIGELKYSSGPNNSQPSIKLSE 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGI 242 S ++ F+ R KTGTP R+ TI + TE+Q DE+ FS+ T Q+ C + Sbjct: 188 SLLENGFELNRFKTGTPPRVKSSTIDYSVTEEQPGDEKPNHFSYETPNSAYLKDQLSCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH+ I +N+ + +++G ++ G RYCPSIEDK+VRF ++ HQ+FLEPEG NT Sbjct: 248 TYTNEATHQKIQDNLHRAPMFTGIVEGVGARYCPSIEDKVVRFSDKPRHQLFLEPEGRNT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q I +I GLE ++R GYAIEYD + P +L P+LETK + Sbjct: 308 EEVYVQGLSTSLPEDVQQDIIHSIEGLENAEMMRTGYAIEYDVVTPHQLRPSLETKIVEN 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQ+NGT+GYEEAA QG++AGIN+A K + R++ YIGVMIDDL +KG E Sbjct: 368 LFTAGQMNGTSGYEEAAGQGIMAGINAALKVQGKEPFVMKRSEGYIGVMIDDLVTKGTNE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF----AKYIQEYNFLRSL- 477 PYR+ TSRAEYR+ LR DNAD RLT IG ++G + + R F A++ E L S+ Sbjct: 428 PYRLLTSRAEYRLLLRHDNADFRLTEIGHEIGLVTKERYDTFVAKKAQFEGEIERLGSIR 487 Query: 478 LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 LK L + + +DG A +FL P+ S Q+L + P + V E+++ Sbjct: 488 LKPTTEIQSYLIENNQAPLKDGI--LAKDFLRRPEVSYQDLLAFVPRDYELPLAVEEQVE 545 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ Y Y + + ++K E + IP++ DY+S+ ++ E KEKL ++P + QAS+ Sbjct: 546 IQVKYEGYIAKAAQKVDKLKRMENKRIPENIDYASINGIATEAKEKLIKIQPETIAQASR 605 Query: 598 IEGMTPAALNLLLIYIKKNTV 618 I G+ PA +++L++Y+++ + Sbjct: 606 ISGVNPADISILMVYVEQGKI 626 >gi|199598241|ref|ZP_03211662.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus rhamnosus HN001] gi|199590844|gb|EDY98929.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus rhamnosus HN001] Length = 633 Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust. Identities = 270/620 (43%), Positives = 374/620 (60%), Gaps = 8/620 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAGCEAA AA++G T L+T + M CNP++GG KG +VREIDA Sbjct: 11 TYDVIVVGAGHAGCEAALAAARMGEKTLLLTISLEMLAFMPCNPSLGGPAKGIVVREIDA 70 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ R+LN KGPAVR R QAD+ Y +M+ I +LD+ QG Sbjct: 71 LGGEMGKNIDRTYIQMRMLNTGKGPAVRALRAQADKAAYHRSMKHVIEDTPHLDLRQGLA 130 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E IV ++ R ++VLT GT RG I IG+L +G PS L Sbjct: 131 TEVLVEDGKAVGIVAATGAIYRAKSIVLTAGTSSRGKIIIGELMYSSGPNNSLPSIKLSE 190 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNR-QIECGI 242 + + F R KTGTP R++G TI + KTE+Q D+ FSF T D + + Q+ C + Sbjct: 191 NLEQLGFKLRRFKTGTPPRVNGNTIDFSKTEEQPGDKTPNHFSFTTPDSVYLKDQLSCWM 250 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH+II EN+ + ++SG IK GPRYCPSIEDKIVRF ++ HQ+FLEPEG +T Sbjct: 251 TYTNATTHQIIRENLDRAPMFSGVIKGVGPRYCPSIEDKIVRFADKPRHQLFLEPEGRDT 310 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 Y ST++PEEIQ + + ++ GLE ++R GYAIEYD I P +L TLETK + Sbjct: 311 SEYYVGDFSTSMPEEIQLKMLHSVAGLEHAELMRAGYAIEYDVIEPWQLKATLETKVVEN 370 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQ+NGT+GYEEAA QG+VAGIN+AR++ R+D+YIGVMIDDL +KG E Sbjct: 371 LYTAGQMNGTSGYEEAAGQGIVAGINAARRAQGKGPFTLKRSDAYIGVMIDDLVTKGTNE 430 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYR+ TSRAEYR+ LR DNAD RLTP+G +LG I ++R F Q + L+ Sbjct: 431 PYRLLTSRAEYRLLLRHDNADLRLTPMGHELGLISDQRYAVFLAKRQAITDELARLEHTR 490 Query: 483 LTSKN----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 L K+ L + + +DG A +FL P+ + Q L P+ VIE+++I Sbjct: 491 LKPKDVNPWLEAHHFASLKDGV--LASDFLKRPEINYQTLEQFLPENPTLDHRVIEQVEI 548 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + YA Y ++ ++K E + IP +Y ++ L+ E ++KL ++P + QAS+I Sbjct: 549 QIKYAGYIAKEEASVAKLKRLEGKKIPARINYEAINGLATEARQKLVKIQPETIAQASRI 608 Query: 599 EGMTPAALNLLLIYIKKNTV 618 G+ PA + +L +YI++ + Sbjct: 609 SGVNPADVAILSVYIEQGRI 628 >gi|254445039|ref|ZP_05058515.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Verrucomicrobiae bacterium DG1235] gi|198259347|gb|EDY83655.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Verrucomicrobiae bacterium DG1235] Length = 612 Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust. Identities = 271/628 (43%), Positives = 371/628 (59%), Gaps = 39/628 (6%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV G GHAGCEAA AA++GA T +++ TI +MSCNPAIGG+ KG +VREIDAL Sbjct: 5 YDVIVCGAGHAGCEAALAAARMGARTLVVSGNIDTIAAMSCNPAIGGVAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M AD +GIQFR+LN KGPAV+ PR Q D+++Y L M+ + QENL + Q V Sbjct: 65 GGEMAVNADVSGIQFRLLNASKGPAVQSPRAQCDKKVYALRMKHVLELQENLSIFQATVT 124 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 G + ++ + +VV+TTGTFLRG++HIGK K GRMGD + +L +S Sbjct: 125 GLIFKAGKVAGCRTNLDVEFFGKSVVVTTGTFLRGLMHIGKNKNEGGRMGDFSAQTLSSS 184 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK-------ITNR-- 236 F++ + RLKTGTP RL G+TI + + E+Q DER F F + + R Sbjct: 185 FLEAGIELERLKTGTPPRLLGRTIDFSQLEEQKGDERPSLFGFYDTRGEKDLFHVEQRGE 244 Query: 237 ----------QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFG 286 Q+ C IT T+ +T RI+ EN+ SA+Y G+I+ GPRYCPSIEDK VRF Sbjct: 245 RLAGWKPGTDQVSCWITYTSADTQRIVNENLHLSAMYGGEIEGTGPRYCPSIEDKFVRFA 304 Query: 287 ERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI 346 + H +FLEPEG NTD Y NG+ST+LP Q + +R+I GLE V+++RP YA+EYD+ Sbjct: 305 NKTRHMLFLEPEGRNTDEYYVNGLSTSLPFAAQLEMLRSIEGLEAVHLLRPAYAVEYDFA 364 Query: 347 NPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDS 406 P +LF LE+KK+ LF AGQINGT+GYEEAA QGLVAG+N+ K + + R D Sbjct: 365 PPTQLFSHLESKKVENLFFAGQINGTSGYEEAACQGLVAGVNAVLKVRGEEPMVLKRHDG 424 Query: 407 YIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAK 466 YIGV+IDDL +KG EPYRMFTSRAEYR+ +A+ R+ K G + + R R + Sbjct: 425 YIGVLIDDLVTKGTREPYRMFTSRAEYRLLFNHGSAELRMLDHASKHGLVSDERLARMKR 484 Query: 467 YIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDAR 526 ++ L+ V + S +I + GK E R Sbjct: 485 KKEDVEKWIHWLE--VNRMGHDSWATIVRRGVGKDELPEEL------------------R 524 Query: 527 KFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSI 586 + +E++ Y Y R+ + +++K EK IP DFDYS L L NE KL+ Sbjct: 525 SLEASTLEQVLYRVKYKGYLERETRQIEKLKDVEKIKIPADFDYSKLKGLRNESVVKLTE 584 Query: 587 LKPFNLLQASKIEGMTPAALNLLLIYIK 614 +P L QAS+I G+ P+ +++L+I ++ Sbjct: 585 TQPATLAQASRISGVNPSDISILMIALR 612 >gi|258646489|ref|ZP_05733958.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Dialister invisus DSM 15470] gi|260403897|gb|EEW97444.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Dialister invisus DSM 15470] Length = 626 Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust. Identities = 260/620 (41%), Positives = 370/620 (59%), Gaps = 8/620 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAGCEAA AA++G T L T + M CNPAIGG GK HLV+EIDA Sbjct: 6 TYDVIVVGAGHAGCEAALAAARMGCRTLLTTISLDNVAMMPCNPAIGGPGKSHLVKEIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG ADA +Q R+LN KGPAV R Q+D+ Y M+ + + +NLD+ Q +V Sbjct: 66 LGGEMGIAADATAVQMRMLNRGKGPAVYALRAQSDKGAYHRYMKNVVENTDNLDLKQVQV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E I + + R V+L TGT+L +I IG G G S L Sbjct: 126 MDIIVEDGKCVGITTELDEEYRAKAVILCTGTYLDSMIIIGDTMYSGGPNGMRSSVGLSA 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + K + R KTGTP+R+D +++ + E + D FSFM+++ + C +T Sbjct: 186 NLKKHGLEILRFKTGTPSRVDRRSLHLEGMELEEGDPENHAFSFMSERKDRNKRNCWLTY 245 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH II ENI + Y+G I G RYCPSIEDK+VRF +++ HQ+F+EPEGL+T Sbjct: 246 TNEKTHDIIRENIMRAPKYAGKIHGIGARYCPSIEDKVVRFADKDRHQLFVEPEGLDTTE 305 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+ST++P ++Q+ F+RTIPG E V ++RP YAIEYD ++P +L+PTLE K+ GL+ Sbjct: 306 MYVQGMSTSMPIDVQYAFLRTIPGFEDVKMMRPAYAIEYDLLDPLQLYPTLEVIKLPGLY 365 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ NGT+GYEEAAAQGLVAGIN+A K D +R ++YIG ++DDL +KG EPY Sbjct: 366 SAGQSNGTSGYEEAAAQGLVAGINAALKIQGKDPFILARHEAYIGSLVDDLVTKGADEPY 425 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSR+EYR+ LR DNAD RLT G +G +GE R RF + ++Y +++ T Sbjct: 426 RMMTSRSEYRLILRQDNADLRLTEKGHSIGLVGEERYARFLERKKKYEEAMDYIRTQRFT 485 Query: 485 SK---NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI--CPDARKFSSLVIERLQIE 539 K N + S+ A + L P+ + + + CP F +E ++I Sbjct: 486 PKEEINRALESMGTAPLTTGTGADQILKRPEMTYRKMMETLGCP---SFDEEAVEEMEIT 542 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ ++ E +P D DY SL +S E ++K+ ++P +L QA++I Sbjct: 543 VKYEGYIARQEAAVRKAARMENEKLPLDMDYLSLDGISTEARQKMDKIRPLSLGQAARIP 602 Query: 600 GMTPAALNLLLIYIKKNTVK 619 G++PA +++L++Y+K+ K Sbjct: 603 GVSPADISVLMVYVKQRKGK 622 >gi|258509932|ref|YP_003172683.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus rhamnosus GG] gi|257149859|emb|CAR88832.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG/GidA [Lactobacillus rhamnosus GG] gi|259651192|dbj|BAI43354.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Lactobacillus rhamnosus GG] Length = 633 Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust. Identities = 270/620 (43%), Positives = 374/620 (60%), Gaps = 8/620 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAGCEAA AA++G T L+T + M CNP++GG KG +VREIDA Sbjct: 11 TYDVIVVGAGHAGCEAALAAARMGEKTLLLTISLEMLAFMPCNPSLGGPAKGIVVREIDA 70 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ R+LN KGPAVR R QAD+ Y +M+ I +LD+ QG Sbjct: 71 LGGEMGKNIDRTYIQMRMLNTGKGPAVRALRAQADKAAYHRSMKHVIEDTPHLDLRQGLA 130 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E IV ++ R ++VLT GT RG I IG+L +G PS L Sbjct: 131 TEVLVEDGKAVGIVAATGAIYRAKSIVLTAGTSSRGKIIIGELMYSSGPNNSLPSIKLSE 190 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNR-QIECGI 242 + + F R KTGTP R++G TI + KTE+Q D+ FSF T D + + Q+ C + Sbjct: 191 NLEQLGFKLRRFKTGTPPRVNGNTIDFSKTEEQPGDKTPNHFSFTTPDSVYLKDQLSCWM 250 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH+II EN+ + ++SG IK GPRYCPSIEDKIVRF ++ HQ+FLEPEG +T Sbjct: 251 TYTNATTHQIIRENLDRAPMFSGVIKGVGPRYCPSIEDKIVRFADKPRHQLFLEPEGRDT 310 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 Y ST++PEEIQ + + ++ GLE ++R GYAIEYD I P +L TLETK + Sbjct: 311 SEYYVGDFSTSMPEEIQLKMLHSVAGLEHAELMRAGYAIEYDVIEPWQLKATLETKVVEN 370 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQ+NGT+GYEEAA QG+VAGIN+AR++ R+D+YIGVMIDDL +KG E Sbjct: 371 LYTAGQMNGTSGYEEAAGQGIVAGINAARRAQGKGPFTLKRSDAYIGVMIDDLVTKGTNE 430 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYR+ TSRAEYR+ LR DNAD RLTP+G +LG I ++R F Q + L+ Sbjct: 431 PYRLLTSRAEYRLLLRHDNADLRLTPMGHELGLISDQRYADFLAKRQAITDELARLEHTR 490 Query: 483 LTSKN----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 L K+ L + + +DG A +FL P+ + Q L P+ VIE+++I Sbjct: 491 LKPKDVNPWLEAHHFAPLKDGV--LASDFLKRPEINYQTLEQFLPENPTLDHRVIEQVEI 548 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + YA Y ++ ++K E + IP +Y ++ L+ E ++KL ++P + QAS+I Sbjct: 549 QIKYAGYIAKEEASVAKLKRLEGKKIPARINYEAINGLATEARQKLVKIQPETIAQASRI 608 Query: 599 EGMTPAALNLLLIYIKKNTV 618 G+ PA + +L +YI++ + Sbjct: 609 SGVNPADVAILSVYIEQGRI 628 >gi|87302071|ref|ZP_01084905.1| glucose-inhibited division protein A [Synechococcus sp. WH 5701] gi|87283639|gb|EAQ75594.1| glucose-inhibited division protein A [Synechococcus sp. WH 5701] Length = 662 Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust. Identities = 260/619 (42%), Positives = 367/619 (59%), Gaps = 17/619 (2%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 + ++++IV+GGGHAGCEAA AA+LG STAL + I CNPA+GG K LV E+ Sbjct: 8 SETFELIVVGGGHAGCEAALTAARLGISTALFSLNLDRIAWQPCNPAVGGPAKSQLVHEV 67 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G++GR+ADA +Q RVLN +GPAV R Q D+ Y M + + NL + + Sbjct: 68 DALGGVIGRLADATTLQKRVLNASRGPAVWALRAQTDKRQYARQMLQLLQHTPNLHLREA 127 Query: 123 EVAGF-------------NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKI 169 V G N I+ + S+ V+LTTGTFL G I +G + Sbjct: 128 MVTGLEVDLEGNGPNQVGNGAVGRITGVRTFFGSVYAAPAVILTTGTFLGGQIWVGNQSM 187 Query: 170 PAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSF- 228 AGR G+ S L + F T RLKTGTPAR+D +++ D+ E+Q +D FSF Sbjct: 188 SAGRAGEQASEGLTEALQALGFHTDRLKTGTPARVDRRSVALDQLEEQPSDAEGRYFSFD 247 Query: 229 MTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGER 288 +++ + C +TRT TH++I +N+ + IY G I S GPRYCPSIEDKIVRF ++ Sbjct: 248 PAAWVSSEPMACHLTRTTAATHQLIRDNLHLTPIYGGFIDSKGPRYCPSIEDKIVRFADK 307 Query: 289 NGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINP 348 HQIFLEPEG +T +Y G ST LPE +Q + +RT+PGLE ++RP YA+EYDY+ Sbjct: 308 PSHQIFLEPEGRDTPELYIQGFSTGLPERLQLELLRTLPGLEHCVMLRPAYAVEYDYLPA 367 Query: 349 KELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYI 408 + P+L TK++ GLF AGQ+NGTTGYEEAAAQGLVAG+N+AR + + F R SYI Sbjct: 368 TQCLPSLMTKRVRGLFSAGQLNGTTGYEEAAAQGLVAGLNAARLLRGQEPVHFPREGSYI 427 Query: 409 GVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYI 468 G +IDDL +K + EPYR+ TSR+EYR+ LR DNAD RLTP+G +LG I +RR F Sbjct: 428 GTLIDDLVTKDLHEPYRVLTSRSEYRLVLRGDNADRRLTPLGRELGLIDDRRWGLFEAKQ 487 Query: 469 QEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTR---TAYEFLSYPDFSIQNLFSICPDA 525 + L+++ L + + + + T + L F ++L + Sbjct: 488 AAIAAEKQRLETVRLKVSDPVAPEAEARSGAPIKGSITLADLLRRSGFHSRDLVDLGLAD 547 Query: 526 RKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 + V E +I+ Y+ Y RQ + +++ +++R IP DYS++ LS E +EKL+ Sbjct: 548 ADLPAGVREGAEIDLKYSGYLARQQQQIDQVRKQDQRPIPGGIDYSAIATLSKEAREKLA 607 Query: 586 ILKPFNLLQASKIEGMTPA 604 ++P NL QAS+I G++PA Sbjct: 608 AVQPLNLGQASRIPGVSPA 626 >gi|331702697|ref|YP_004399656.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Lactobacillus buchneri NRRL B-30929] gi|329130040|gb|AEB74593.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Lactobacillus buchneri NRRL B-30929] Length = 643 Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust. Identities = 262/631 (41%), Positives = 371/631 (58%), Gaps = 15/631 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIV+G GHAGCEAA AA++G T L+T + M CNP++GG KG +VRE+D Sbjct: 16 QDYDVIVVGAGHAGCEAALAAARMGNKTLLLTINLDMVAFMPCNPSVGGPAKGTVVREVD 75 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G MG+ D IQ R+LN KGPAV+ R QAD+ Y M+ I + NL + QG Sbjct: 76 ALGGEMGKNIDKTYIQMRMLNTGKGPAVQALRAQADKHAYHAEMKHTIEKEPNLTLRQGI 135 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + ++ + VV+ GT RG I IG+L +G P+ L Sbjct: 136 VDSLIVEDGVCKGVITNTGAECYAKAVVIAAGTAARGKIIIGELMYASGPNNSQPAEKLS 195 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK----ITNRQIE 239 + FD R KTGTP R+DG TI + KTE+Q DE+ FSF + Q+ Sbjct: 196 GNLEALGFDLERFKTGTPPRVDGTTIDYSKTEEQPGDEKPHHFSFESSDENYLAVKDQLS 255 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +T TN TH+II +N+ + +++G I+ GPRYCPSIEDK+VRF +++ HQ+FLEPEG Sbjct: 256 CWLTYTNETTHKIIRDNLDRAPMFTGVIEGVGPRYCPSIEDKVVRFADKSRHQLFLEPEG 315 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 T+ Y +G+ST++PEE+Q + I +I G+E ++RPGYAIEYD + P +L PTLETK Sbjct: 316 RKTEEWYVDGLSTSMPEEVQQKMIHSIVGMENAQMMRPGYAIEYDVVAPYQLKPTLETKV 375 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 + LF AGQ NGT+GYEEAA QGL+AGIN+ R++ R ++YIGVMIDDL +KG Sbjct: 376 VKNLFTAGQTNGTSGYEEAAGQGLIAGINAGRRALGKGPFVLKRNEAYIGVMIDDLVTKG 435 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYR+ TSRAEYR+ LR DNAD RLT G ++G I + +R+AK++ + + + Sbjct: 436 TKEPYRLLTSRAEYRLLLRTDNADMRLTEKGHEIGLISD---ERYAKFLAKKKAIEAEFD 492 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYE------FLSYPDFSIQNLFSICPDAR-KFSSLV 532 L S F Q+ + + FL P Q L P A K V Sbjct: 493 RLNTIRIKPSDEVNQFVQEHGDKPLQDGVLASIFLRRPYVDYQTLMRFIPQAETKPDRHV 552 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 IE+++I++ YA Y + +++K E + IP DY ++ ++ E ++KL + P + Sbjct: 553 IEQIEIQTKYAGYIKKAEQSVEKMKRMEAKKIPDRIDYDAIDGIATEARQKLQKIHPETI 612 Query: 593 LQASKIEGMTPAALNLLLIYIKKNTV-KLNE 622 QAS+I G+ PA + +L +YI++ + KL E Sbjct: 613 AQASRISGVNPADIAILSVYIQQGKISKLAE 643 >gi|56751692|ref|YP_172393.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Synechococcus elongatus PCC 6301] gi|81170584|sp|Q5N1E7|MNMG_SYNP6 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|56686651|dbj|BAD79873.1| glucose inhibited division protein [Synechococcus elongatus PCC 6301] Length = 635 Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust. Identities = 260/617 (42%), Positives = 370/617 (59%), Gaps = 11/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIG GHAGCEAA AA+LG T L+T IG CNPA+GG K L E+DAL Sbjct: 7 FDVIVIGAGHAGCEAALAAARLGCQTLLLTLNLDRIGWQPCNPAVGGPAKSQLAHEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G +G++AD +Q RVLN +GPAV R Q D+ Y +++ + Q NL + +G V Sbjct: 67 GGEIGKMADRTYLQKRVLNASRGPAVWALRAQTDKREYAAVIKQVLEQQPNLRLREGMVT 126 Query: 126 ----GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G N E + + S R V+LTTGTFL G I +G +PAGR G+ + Sbjct: 127 DLLIGPNDE---VQGVTTYFGSSFRAKAVILTTGTFLGGCIWVGNKSMPAGRAGEFAAVG 183 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIEC 240 L + + F+T RLKTGTPAR+D +++ + + E Q D + FSF + R Q+ C Sbjct: 184 LTETLQRLGFETDRLKTGTPARVDKRSVDYSRLEPQPGDPEVRWFSFDPEAWVEREQLPC 243 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +TRT ETH++I +N+ + +Y G I + GPRYCPSIEDKIVRF ++ HQIF+EPEG Sbjct: 244 YLTRTTAETHKLIRDNLYLTPVYGGYIDAKGPRYCPSIEDKIVRFADKESHQIFIEPEGR 303 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + +Y G ST LPE++Q ++T+PGLE ++RP YA+EYDY+ + PTL T+++ Sbjct: 304 DIPELYIQGFSTGLPEDLQLALLQTLPGLEDCVMLRPAYAVEYDYLPATQCLPTLMTRRV 363 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQ+NGTTGYEEAAAQG+VAGIN+AR D I F R SYIG +IDDL +K + Sbjct: 364 EGLFSAGQLNGTTGYEEAAAQGIVAGINAARFVQGQDAIVFPREGSYIGTLIDDLCTKDL 423 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYR+ TSR+EYR+ LR DNAD R+TP+G ++G I +RR F + ++ L Sbjct: 424 REPYRVLTSRSEYRLLLRADNADQRMTPLGREIGLIDDRRWALFEQKQARIAAEQTRLTQ 483 Query: 481 LVLTSKNLSSTSISFKQDGKTR---TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 + + +I+ + + T + L P+F +L + + E + Sbjct: 484 QRVKEHDPVGQAIAQQTQAPIKGSATLADLLRRPNFHYIDLEAHGLGDPSLAIAEKEGAE 543 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I YA Y RQ + ++ + +R +P D DYS++ ++ E +EKL+ +P L QAS+ Sbjct: 544 IAIKYAGYLQRQQAQVDQVVRQSQRPLPVDLDYSAITSMRLEAREKLARFRPLTLGQASR 603 Query: 598 IEGMTPAALNLLLIYIK 614 I G+ PA +N LLI+++ Sbjct: 604 IGGVNPADINALLIWLE 620 >gi|319953029|ref|YP_004164296.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmg [Cellulophaga algicola DSM 14237] gi|319421689|gb|ADV48798.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Cellulophaga algicola DSM 14237] Length = 622 Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust. Identities = 269/632 (42%), Positives = 386/632 (61%), Gaps = 31/632 (4%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M ++ YDVIV+G GHAGCEAAA AA +G+ L+T I MSCNPA+GG+ KG +VR Sbjct: 1 MFDKEYDVIVVGAGHAGCEAAAAAANMGSKVLLVTMNLQNIAQMSCNPAMGGIAKGQIVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADR----ELYRLAMQREILSQEN 116 EIDAL G G ++D + IQF++LN KGPA+ PRTQ DR E +RLA++ N Sbjct: 61 EIDALGGYSGIISDKSAIQFKMLNKSKGPAMWSPRTQNDRMVFAEEWRLALE----DTPN 116 Query: 117 LDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGD 176 +D Q V+G E N + I+ +VVLT GTFL G+IHIG GR G+ Sbjct: 117 VDFYQEMVSGLLVENNKAVGVTTSLGIKIKSKSVVLTNGTFLNGLIHIGDKNFGGGRAGE 176 Query: 177 SPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR 236 + + + F++GR+KTGTP R+DG+++ + K Q D FS+ K Sbjct: 177 RAATGITEQLLSLGFESGRMKTGTPPRVDGRSLDYSKMIIQPGDAIPEKFSYSPTKALEH 236 Query: 237 QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLE 296 Q +C +T T+ H ++ E S +++G IKS GPRYCPSIEDKI RF ++N HQ+F+E Sbjct: 237 QRDCHMTHTSELVHDLLREGFDRSPMFNGRIKSLGPRYCPSIEDKINRFADKNSHQLFVE 296 Query: 297 PEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLE 356 PEG T VY NG ST+LPE++Q + +R++ G E V RPGYAIEYDY P +L TLE Sbjct: 297 PEGWRTVEVYVNGFSTSLPEDVQFKALRSVVGFENVKFFRPGYAIEYDYFPPTQLKHTLE 356 Query: 357 TKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 TK +S L+ AGQINGTTGYEEAA+QGL+AGIN+ +K N+ + R ++YIGV+IDDL Sbjct: 357 TKLVSNLYFAGQINGTTGYEEAASQGLMAGINAHQKINEKEDFILKRDEAYIGVLIDDLI 416 Query: 417 SKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKR----------FAK 466 +KG EPYRMFTSRAEYR LR DNAD RLTP+G K+G E R KR F + Sbjct: 417 TKGTEEPYRMFTSRAEYRTLLRQDNADLRLTPMGYKIGLAREDRLKRMEDKLEKSEKFVQ 476 Query: 467 YIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICP--- 523 + ++ + L + + S N + SFK ++ S P+ ++ ++ +I Sbjct: 477 FFKDTSVLPDQINP-IFESVNSAVVDQSFKM-------FKAFSRPNVTMDHMMTIASVSN 528 Query: 524 --DARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELK 581 + V+E+ +++ Y+ Y ++ A ++ E IP +FDY+ L +LS E + Sbjct: 529 FVKENDLNREVLEQAEVQVKYSGYIAKEKNNADKLHRLENVKIPANFDYTKLKSLSTEAR 588 Query: 582 EKLSILKPFNLLQASKIEGMTPAALNLLLIYI 613 +KL+ ++P + QAS+I G++P+ +++LL+++ Sbjct: 589 QKLTKIQPVTISQASRISGVSPSDISVLLVFL 620 >gi|167754941|ref|ZP_02427068.1| hypothetical protein CLORAM_00445 [Clostridium ramosum DSM 1402] gi|237735331|ref|ZP_04565812.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Mollicutes bacterium D7] gi|167704991|gb|EDS19570.1| hypothetical protein CLORAM_00445 [Clostridium ramosum DSM 1402] gi|229381076|gb|EEO31167.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Coprobacillus sp. D7] Length = 620 Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust. Identities = 263/625 (42%), Positives = 375/625 (60%), Gaps = 15/625 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IV+GGGHAG EAA A++ T L+T +GS+ CN +IGG KG +VREIDAL Sbjct: 2 YDIIVVGGGHAGIEAALAPARMNQKTVLVTSNFDNVGSLPCNTSIGGPAKGIIVREIDAL 61 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + AD +Q ++LN KGP V+ R QAD+++Y MQ + QENLD+I+G V Sbjct: 62 GGQMPKTADKTYLQMKMLNTAKGPGVQSLRAQADKKVYPRYMQEVLKKQENLDIIEGMVE 121 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E N + +++ + I V+LTTGT+L+ I G K +G S L Sbjct: 122 DLIVEDNCVKGVILDNGQTIEGRMVILTTGTYLKAEILCGDQKHASGPDQQKESKYLSEK 181 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--NRQIECGIT 243 RLKTGTP R++ ++ + KT Q + + FS+ T++ Q C +T Sbjct: 182 LANLGMRIQRLKTGTPPRVEINSVDYSKTSLQPGTDANLAFSYQTNEFIPIEEQTPCYLT 241 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH+II +N+ S++YSG +K GPRYCPSIEDKIV+F ++ HQIFLEPE D Sbjct: 242 YTNEKTHQIIRDNLHRSSMYSGIVKGIGPRYCPSIEDKIVKFSDKPQHQIFLEPESAEMD 301 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G ST+LP ++Q + IRTIPGLE I++ YAIEYD I+P +L+P+LETK I L Sbjct: 302 TIYVQGFSTSLPHDVQEEMIRTIPGLENCKILKYAYAIEYDAIDPLQLWPSLETKIIKNL 361 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGT+GYEEAA QGL+AGIN+ K+ + + R ++YIGVMIDDL +KG EP Sbjct: 362 FTAGQINGTSGYEEAAGQGLIAGINATLKNQGKEPLILKRDEAYIGVMIDDLVTKGTDEP 421 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRM TSRAEYR+ +R DNAD RL G +G + ++ + + + E L ++ Sbjct: 422 YRMLTSRAEYRLLIRHDNADERLMKYGHDVGLVSDQIYQAYLDKMSEIFAEIDRLDTIRF 481 Query: 484 TSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 T K+ + + + G R +A E + P+ + + + +A K S +R+ I Sbjct: 482 TPKH--EINDALEHFGSARLTEGISAKELIKRPELTYEKILPYV-EAPKLSEEQRKRVTI 538 Query: 539 ESSYAAYTGRQMIEA-KEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 Y Y + +A K++K EEK+ IP D DY + L+ E K+KLS ++P + QAS+ Sbjct: 539 LIKYKGYIDKARRQADKQVKMEEKK-IPADIDYEDISNLALEAKQKLSKIRPLTIGQASR 597 Query: 598 IEGMTPAALNLLLIYIKKNTVKLNE 622 I G+ PA +++LLIY+K+ K NE Sbjct: 598 ISGINPADISVLLIYLKQ---KYNE 619 >gi|110598308|ref|ZP_01386583.1| glucose inhibited division protein A [Chlorobium ferrooxidans DSM 13031] gi|110340116|gb|EAT58616.1| glucose inhibited division protein A [Chlorobium ferrooxidans DSM 13031] Length = 621 Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust. Identities = 260/620 (41%), Positives = 367/620 (59%), Gaps = 10/620 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IV G GHAGCEAA AA+ G S LIT S+I MSCNPAIGG+ KG + REIDAL Sbjct: 2 YDIIVAGAGHAGCEAALAAARSGCSCLLITTDLSSIARMSCNPAIGGVAKGQITREIDAL 61 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M R DA GIQFR+LN KGPA+ PR QAD+ +Y L M++ I + N+D++Q V Sbjct: 62 GGEMARAIDANGIQFRMLNRSKGPAMHSPRAQADKAMYSLYMRKVIERETNIDLLQDTVV 121 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRM-GDSPSNSLFN 184 G + + + + +I +L GTFL G+IHIG GR + P L Sbjct: 122 GIESHEGVFQGARISSGRVIAGGAAILCCGTFLNGLIHIGMNHYDGGRTTAEPPVRGLTE 181 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGIT 243 ++ F GRLKTGTP R+D +++ + + E Q D FSF NR Q+ C IT Sbjct: 182 DLLRLGFVAGRLKTGTPPRIDARSVDYSRVESQQGDAEPSAFSFSKSLDRNRRQVSCYIT 241 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 +T +TH I+ + S +++G ++ GPRYCPS+EDKI RF ++ H IFLEPEG++T+ Sbjct: 242 KTTPQTHDILKKGFSRSPLFTGKVQGIGPRYCPSVEDKICRFPDKESHHIFLEPEGIDTN 301 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y NG ST+LPE+IQ + +R+IPGL IIRPGYAIEYDY P ++ TLETK I L Sbjct: 302 EMYVNGFSTSLPEDIQEEGLRSIPGLSNAKIIRPGYAIEYDYFFPYQIKGTLETKLIENL 361 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGT+GYEEAAAQGL+AGIN++ K+ I R+++YIGV+IDD+ +K LEP Sbjct: 362 YFAGQINGTSGYEEAAAQGLMAGINASLKARSRPPINLRRSEAYIGVLIDDIITKETLEP 421 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTS AE+R+ LR DNAD RL G + G + I++ N L++L + L Sbjct: 422 YRMFTSSAEHRLHLRHDNADVRLVTFGYEAGLVQHETYHLCLSKIEKINHLKALCANTRL 481 Query: 484 TSKNLSS--TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARK------FSSLVIER 535 + ++ + + L P +++ + + R + E+ Sbjct: 482 QPEEINRMLAKSGYAHVDVSHHVAALLKRPGITLELILAESEAFRNSVHQITIDRSIYEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 + I+ Y Y R ++ A++I E IP F+Y + LSNE KEKL KP + A Sbjct: 542 VDIDLKYEGYLKRDLLMAEKISRLESLRIPPRFNYDGISGLSNEGKEKLKKHKPETIGVA 601 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G++P+ +++L + + + Sbjct: 602 SRIPGVSPSDISVLTVRLGR 621 >gi|32265512|ref|NP_859544.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Helicobacter hepaticus ATCC 51449] gi|81170547|sp|Q7VK79|MNMG_HELHP RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|32261560|gb|AAP76610.1| glucose inhibited division protein A [Helicobacter hepaticus ATCC 51449] Length = 629 Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust. Identities = 275/635 (43%), Positives = 379/635 (59%), Gaps = 24/635 (3%) Query: 9 IVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGL 68 +VIGGGHAG EA+ V+AK+GA T LIT I SCNPA+GGLGKGHLV+EIDAL G+ Sbjct: 1 MVIGGGHAGVEASIVSAKMGAKTHLITLLIQNIALASCNPAVGGLGKGHLVKEIDALGGV 60 Query: 69 MGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFN 128 MG + D GIQFR+LN KGPAVRG R Q D + Y + + L+ NL + Q V Sbjct: 61 MGVITDKCGIQFRILNASKGPAVRGTRAQIDMDRYSIFAKEIALNTPNLTISQESVESLI 120 Query: 129 TEKN-----IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 E++ I+ + V+LTTGTFLRG++HIG+ K+ GR G+ +L Sbjct: 121 YEQDSKGRYIVKGVTTNIGKTYFAKKVILTTGTFLRGLVHIGETKLQNGRFGEMSPQNLS 180 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 NS GRLKTGT AR+DG++I + E DE+ FS+ T + Q+ C +T Sbjct: 181 NSLQDMGLTLGRLKTGTCARIDGRSIDFSALEIHNGDEKPPHFSYKTINFSPTQLPCFVT 240 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH+II +N + +++G I+ GPRYCPSIEDK+ RF +++ HQ+FLEP+ Sbjct: 241 YTNENTHKIIRDNFHRAPLFTGQIEGVGPRYCPSIEDKVNRFADKSRHQLFLEPQTQEAV 300 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 Y NG+ST+LP ++Q I +I GLE +I R GYAIEYDY+ P EL+ TLETKK + L Sbjct: 301 EYYINGLSTSLPIDVQEAVIHSIKGLENAHITRYGYAIEYDYVEPTELYHTLETKKCANL 360 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 FLAGQINGTTGYEEAAAQG++AGIN A S + +R ++YIGVMIDDL +KG EP Sbjct: 361 FLAGQINGTTGYEEAAAQGIMAGIN-ATLSLQNKSFTLARNEAYIGVMIDDLVTKGTKEP 419 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFA----------KYIQEYNF 473 YR+FTSRAEYR+ LR DNA RL K G I + R + Y+Q ++ Sbjct: 420 YRVFTSRAEYRLLLREDNAYLRLGTYAYKFGLIDKVRYTQIMADKTHIEHTINYLQNHHI 479 Query: 474 LRSLLKSLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS 530 S +L S L S ++ G+ L ++ I D S Sbjct: 480 TPSSSNLTMLASLGLPPISDKALLIHIVGREELDCALLR----TLLTHLGIT-DVESMSD 534 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 L IE++ IES Y Y +Q + +++ + IP+DF + ++P LS E+ EKL P Sbjct: 535 LAIEQIFIESKYFDYIQKQKQQIGQMRQMLQVEIPRDFIFDNIPGLSLEVIEKLKKFTPK 594 Query: 591 NLLQASKIEGMTPAALNLLLIYIKKNTVKLNEIVL 625 +L +A++I G+TPA++++L +YI + K ++I++ Sbjct: 595 SLFEANEISGITPASIDVLHLYIHLHHKKKSQILV 629 >gi|283956586|ref|ZP_06374065.1| glucose inhibited division protein A [Campylobacter jejuni subsp. jejuni 1336] gi|283791835|gb|EFC30625.1| glucose inhibited division protein A [Campylobacter jejuni subsp. jejuni 1336] Length = 619 Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust. Identities = 272/618 (44%), Positives = 368/618 (59%), Gaps = 15/618 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EA+A AA++G T L+T IG+ SCNPAIGGL KGHLV+E+DA+ Sbjct: 2 FDVIVIGGGHAGVEASAAAARMGKKTLLLTTLIEQIGAASCNPAIGGLAKGHLVKELDAM 61 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLMG + D AGIQFR+LN KG AV+G R Q D + YR+ + ++L NL++ Q + Sbjct: 62 GGLMGEITDEAGIQFRILNESKGVAVQGSRAQIDMDKYRIIARNKLLKLPNLEISQEQAN 121 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + + V+LTTGTFL G+IHIG+ K+ AGR+G+ S +L N Sbjct: 122 ALIVENDEVKGVKTNLENTYFAKKVILTTGTFLNGLIHIGENKLQAGRVGELASVNLGNY 181 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 GRLKTGT R+D K+I + E Q D FSF + Q+ C I RT Sbjct: 182 LQTLGLKMGRLKTGTCPRVDAKSIDFSALEIQDGDVNPKAFSFRSRNFNPTQLPCYIART 241 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N TH II N + +++G I+ GPRYCPSIEDKI RF ++ H +F+EP+ ++ Sbjct: 242 NTTTHEIIKNNFYRAPLFTGQIEGVGPRYCPSIEDKINRFSDKESHHLFIEPQTIDATEY 301 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG ST+LP E+Q Q +R++ G E I R GYAIEYDYI P EL TLE KKI L+ Sbjct: 302 YINGFSTSLPYEVQTQMLRSVKGFENAKITRFGYAIEYDYIEPTELKHTLELKKIKNLYC 361 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAAAQG +AGIN++ + + + R ++YIGV+IDDL KG EPYR Sbjct: 362 AGQINGTTGYEEAAAQGFMAGINASLSIDMKEPLILRRDEAYIGVLIDDLVVKGTKEPYR 421 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL-VLT 484 MFTSRAE+R+ LR +NA RL G LG + E+ YIQ N +L K L L Sbjct: 422 MFTSRAEFRLLLREENAILRLGKYGYDLGLLSEQD----FTYIQ--NIANNLQKGLEFLL 475 Query: 485 SKNLSST--------SISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 SK + S+ + + ++ F I+ L + P + + Sbjct: 476 SKEFTPNNQNNAFLESLGEDKISSIVNLQKIVARASFDIEKLKKLDPMFETMDHYSLREI 535 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 E+ Y Y Q + +++K + IP++FD+ S+ LSNE+ EKL+ KP + AS Sbjct: 536 LNEAKYYHYISMQKAQVEKMKNLSELKIPENFDFKSVSGLSNEVVEKLNHHKPPTIFAAS 595 Query: 597 KIEGMTPAALNLLLIYIK 614 +I G+TPAAL++L IYIK Sbjct: 596 QISGITPAALDILQIYIK 613 >gi|161508217|ref|YP_001578188.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus helveticus DPC 4571] gi|205831539|sp|A8YTQ6|MNMG_LACH4 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|160349206|gb|ABX27880.1| Glucose inhibited division protein [Lactobacillus helveticus DPC 4571] Length = 661 Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust. Identities = 265/614 (43%), Positives = 360/614 (58%), Gaps = 5/614 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAA +A +G T L+T + M CNP++GG KG +VREIDAL Sbjct: 10 YDVIVVGAGHAGCEAALASAHMGQKTLLVTIGLDMVAFMPCNPSVGGPAKGTVVREIDAL 69 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ DA IQ R+LN KGPAVR R QAD+ Y M+ I + NL + Q V Sbjct: 70 GGQMGKNIDATYIQMRMLNTGKGPAVRALRAQADKWQYHEHMKDTIENTPNLTLRQAIVD 129 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + ++ + +VVLTTGT RG I IG+L +G +PS L + Sbjct: 130 QLVVEDGVCKGVITNTGAKYHAKSVVLTTGTAARGKIIIGELTYSSGPNNTTPSIKLSEN 189 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--NRQIECGIT 243 K F R KTGTP R++G TI + KTE++ D+ FS+ + + QI C +T Sbjct: 190 LEKLGFKLRRFKTGTPPRVNGNTIDYSKTEEEPGDKTPRHFSYESKDVDYLKNQISCWMT 249 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II EN+ + ++SG IK GPRYCPSIEDK+VRF +++ HQIFLEPEG T Sbjct: 250 YTNNGTHEIIRENLNRAPMFSGIIKGVGPRYCPSIEDKVVRFADKDRHQIFLEPEGRTTK 309 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY ST++PEEIQ + + ++ GLE ++RPGYAIEYD + P +L TLETK I L Sbjct: 310 EVYVGDFSTSMPEEIQLKMVHSVAGLEHAEMMRPGYAIEYDVVEPWQLKHTLETKNIKHL 369 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ+NGT+GYEEAA QGL+AGIN+A + R D+YIGV+IDDL +KG EP Sbjct: 370 FTAGQMNGTSGYEEAAGQGLIAGINAALSAQDKPGFTLGRNDAYIGVLIDDLVTKGTNEP 429 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL-V 482 YR+ TSRAEYR+ LR DNAD RLT G +LG I + R ++F + Q + L + V Sbjct: 430 YRLLTSRAEYRLILRHDNADLRLTEYGHELGLISDERYEKFEEKKQAIRDAKERLHEITV 489 Query: 483 LTSKNLSSTSISFKQDGKTR--TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 S ++ S Q+ A FL P+ I ++ + + V E+++I Sbjct: 490 HLSDDVQEFLKSIGQEPMKAGVKADVFLRRPNVKIADIERLTGEKIPGDRYVKEQVEIGI 549 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 YA Y ++ +K +E + IP D DY + L+ E ++K ++P L QA +I G Sbjct: 550 KYAGYIKKEETRIARLKRQEAKKIPADIDYEMIEGLATEARQKFEKIRPETLAQAERISG 609 Query: 601 MTPAALNLLLIYIK 614 + PA L +L +YI+ Sbjct: 610 VNPADLAILSVYIQ 623 >gi|87123456|ref|ZP_01079307.1| glucose inhibited division protein A [Synechococcus sp. RS9917] gi|86169176|gb|EAQ70432.1| glucose inhibited division protein A [Synechococcus sp. RS9917] Length = 644 Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust. Identities = 263/624 (42%), Positives = 371/624 (59%), Gaps = 20/624 (3%) Query: 11 IGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMG 70 +GGGHAGCEAA AA+LG +TAL + I CNPA+GG K LV E+DAL G++G Sbjct: 1 MGGGHAGCEAAITAARLGLNTALFSLNLDRIAWQPCNPAVGGPAKSQLVHEVDALGGVIG 60 Query: 71 RVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTE 130 R+ADA IQ R+LN +GPAV R Q D+ Y M R + NL + + V G E Sbjct: 61 RLADATAIQKRILNASRGPAVWALRAQTDKRQYSRQMLRLLQHTPNLALREAMVTGLEIE 120 Query: 131 KNI----------------ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRM 174 + I+ + S+ VVLT GTFL G I +G + AGR Sbjct: 121 GDPTGGGDDWDPRQGAAARITGVRTYFGSVYGARAVVLTAGTFLGGRIWVGHQSMAAGRA 180 Query: 175 GDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSF-MTDKI 233 G+ + L + + F T RLKTGTPAR+D ++I D+ E+Q +D FSF + Sbjct: 181 GEQAAEGLTEALQQLGFHTDRLKTGTPARVDRRSIALDQLEEQPSDAADRFFSFDPAAWV 240 Query: 234 TNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQI 293 + Q+ C ITRT TH++I +N+ +AIY G I S GPRYCPSIEDKIVRF +++ HQI Sbjct: 241 SGEQMSCHITRTTAATHQLIQDNLHLTAIYGGVIDSKGPRYCPSIEDKIVRFADKDSHQI 300 Query: 294 FLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFP 353 FLEPEG +T +Y G ST LPE IQ Q +R++PGLE+ ++R Y+++YDY+ +L P Sbjct: 301 FLEPEGRDTPEIYVQGFSTGLPEPIQLQLLRSLPGLEQCVMLRAAYSVDYDYLPATQLLP 360 Query: 354 TLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMID 413 +LETK++ GLF AGQ+NGTTGYEEAAAQGLVAG+N+AR+ + + F R SYIG MID Sbjct: 361 SLETKRVEGLFSAGQLNGTTGYEEAAAQGLVAGLNAARRIRGQEPVHFPREGSYIGTMID 420 Query: 414 DLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNF 473 DL S+ + EPYR+ TSR+EYR+ LR DNAD RLTP+G +LG I +RR F + + Sbjct: 421 DLVSQDLREPYRVLTSRSEYRLVLRGDNADRRLTPLGRELGLIDDRRWHLFQEKLAALEG 480 Query: 474 LRSLLKSLVLTSKNLSSTSISFKQDGKTR---TAYEFLSYPDFSIQNLFSICPDARKFSS 530 L+ L + ++++ + + T + L P +L Sbjct: 481 ETQRLERQRLKVSDPVASAVEAETGAPIKGSITLADLLRRPGVHSADLVRHGLADADLPL 540 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 V E +I+ Y+ Y RQ + ++K + +R +P D DY+++ LS E +EKL+ ++P Sbjct: 541 PVREGAEIDIKYSGYLQRQQQQIDQVKRQGQRRLPADLDYTNIGTLSREAREKLAAVRPV 600 Query: 591 NLLQASKIEGMTPAALNLLLIYIK 614 +L QAS+I G++ A L LL++++ Sbjct: 601 SLGQASQIPGVSQADLTALLVWLE 624 >gi|86152857|ref|ZP_01071062.1| glucose-inhibited division protein A [Campylobacter jejuni subsp. jejuni HB93-13] gi|85843742|gb|EAQ60952.1| glucose-inhibited division protein A [Campylobacter jejuni subsp. jejuni HB93-13] Length = 619 Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust. Identities = 271/618 (43%), Positives = 370/618 (59%), Gaps = 15/618 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EA+A AA++G T L+T IG+ SCNPAIGGL KGHLV+E+DA+ Sbjct: 2 FDVIVIGGGHAGVEASAAAARMGKKTLLLTTLIEQIGAASCNPAIGGLAKGHLVKELDAM 61 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLMG + D AGIQFR+LN KG AV+G R Q D + YR+ + ++L NL++ Q + + Sbjct: 62 GGLMGEITDEAGIQFRILNESKGVAVQGSRAQIDMDKYRIIARNKLLKLPNLEISQEQAS 121 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + ++ V+LTTGTFL G+IH+G+ K+ AGR+G+ S +L N Sbjct: 122 VLIVENDEVKGVKTNLENIYFAKKVILTTGTFLNGLIHVGENKLQAGRVGELASVNLGNY 181 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 GRLKTGT R+D K+I + E Q D FSF + Q+ C I RT Sbjct: 182 LQTLGLKMGRLKTGTCPRVDAKSIDFSVLEIQDGDVNPKAFSFRSRNFNPTQLPCYIART 241 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N TH II N + +++G I+ GPRYCPSIEDKI RF ++ H +F+EP+ ++ Sbjct: 242 NTTTHEIIKNNFYRAPLFTGQIEGVGPRYCPSIEDKINRFSDKESHHLFIEPQTIDATEY 301 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG ST+LP E+Q Q +R++ G E I R GYAIEYDYI P EL TLE KKI L+ Sbjct: 302 YINGFSTSLPYEVQTQMLRSVEGFENAKITRFGYAIEYDYIEPTELKHTLELKKIKNLYC 361 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAAAQG +AGIN++ + + + R ++YIGV+IDDL KG EPYR Sbjct: 362 AGQINGTTGYEEAAAQGFMAGINASLSIDMKEPLILRRDEAYIGVLIDDLVVKGTKEPYR 421 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL-VLT 484 MFTSRAE+R+ LR +NA RL G LG + E+ YIQ N +L K L L Sbjct: 422 MFTSRAEFRLLLREENAILRLGKYGYDLGLLSEQD----FTYIQ--NIANNLQKGLEFLL 475 Query: 485 SKNLSST--------SISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 SK + S+ + + ++ F I+ L + P + + Sbjct: 476 SKEFTPNNQNNAFLESLGEDKISSIVNLQKIVARASFDIEKLKKLDPIFETMDHYSLREI 535 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 E+ Y Y Q + +++K + IP++FD+ S+ LSNE+ EKL+ KP + AS Sbjct: 536 LNEAKYYHYISMQKAQVEKMKNLSELKIPENFDFKSVSGLSNEVVEKLNHYKPPTIFAAS 595 Query: 597 KIEGMTPAALNLLLIYIK 614 +I G+TPAAL++L IYIK Sbjct: 596 QISGITPAALDILQIYIK 613 >gi|255994564|ref|ZP_05427699.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Eubacterium saphenum ATCC 49989] gi|255993277|gb|EEU03366.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Eubacterium saphenum ATCC 49989] Length = 641 Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust. Identities = 257/621 (41%), Positives = 369/621 (59%), Gaps = 12/621 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DV VIG GHAGCEA AA+LG T + + M+CNP+IGG GKG LVREIDAL Sbjct: 19 FDVAVIGAGHAGCEAGLAAARLGLKTVVFASTLEAVAMMACNPSIGGTGKGQLVREIDAL 78 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV- 124 G MG DA +Q ++LN KGPA++ R QAD++ Y M+ + +ENL++ Q E+ Sbjct: 79 GGEMGVNIDATMVQSKMLNTGKGPAIQSLRAQADKKEYHARMKSVLEKEENLELKQAEIV 138 Query: 125 ---AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 A + K +++++ + + V+L TGTFL I IG + +G G + N Sbjct: 139 TIEAAYTEGKKRVTAVITKTGARYEAKAVILATGTFLSSKIFIGHSEYSSGPDGMAACNE 198 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L S R KTGTPAR T + +++ D+ ++PFSF+T I Q+ C Sbjct: 199 LSQSIRTLGLKLRRFKTGTPARALKNTFDYSLMKREEGDQPVVPFSFLTKNINIDQLPCY 258 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN +TH II +N SA++SG I+ GPRYCPSIEDK+ RF ++ HQ+F+EPEG N Sbjct: 259 LTYTNEKTHEIIRDNFNRSAMFSGKIEGAGPRYCPSIEDKVKRFADKKRHQLFIEPEGRN 318 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ +Y G+S++LPE++Q F RTIPGLE + I RP YAIEYD I+ ELF TLETK++ Sbjct: 319 TEEMYIQGMSSSLPEDVQTLFYRTIPGLENIEISRPAYAIEYDCIDSLELFHTLETKEVG 378 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 L+ AGQING++GYEEA AQGL+AGIN+ K R ++YIGV+IDDL +KG Sbjct: 379 NLYCAGQINGSSGYEEAGAQGLIAGINAGLKLRNKPPFVLGRDEAYIGVLIDDLVTKGTN 438 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRM TSRAEYR+ LR DNAD RLT G ++G + R ++ + Q + LK Sbjct: 439 EPYRMMTSRAEYRLLLRQDNADLRLTQRGYEIGLASDERLEKMKRKRQGIEDELARLKKH 498 Query: 482 VLTSKNLSSTSISFKQDG-----KTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 + + ++ +Q G K + YE L P S + L ++ + VI ++ Sbjct: 499 KASPEEVNDI---LEQKGTGAISKKTSLYELLKRPQLSYEELGAVDGERPALDDGVITQV 555 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I Y Y +Q+ + K E + + + DY S+ L E EKL+ +KP ++ AS Sbjct: 556 EISCKYEGYINKQLEQVDRFKQLEDKALSANLDYLSIKGLRLEAAEKLAAIKPASVGAAS 615 Query: 597 KIEGMTPAALNLLLIYIKKNT 617 +I G++PA + +LL+Y+++ T Sbjct: 616 RISGVSPADIGVLLVYLERMT 636 >gi|322378813|ref|ZP_08053239.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Helicobacter suis HS1] gi|321148737|gb|EFX43211.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Helicobacter suis HS1] Length = 624 Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust. Identities = 274/616 (44%), Positives = 367/616 (59%), Gaps = 7/616 (1%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALD 66 D++V+GGGHAG EA+ VAAK+GA L+T IG SCNPAIGGLGKGHLV+EIDAL Sbjct: 3 DIVVVGGGHAGIEASIVAAKMGAKVHLLTLLIENIGLASCNPAIGGLGKGHLVKEIDALG 62 Query: 67 GLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAG 126 G+MG ++D +G+QFR+LN KGPAVRG R Q D +LYR + +L+ NL V Q V G Sbjct: 63 GVMGILSDLSGLQFRILNASKGPAVRGTRAQIDMDLYRQNARNLVLNTSNLSVSQEMVEG 122 Query: 127 FNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSF 186 E + + + S V+LTTGTFL+G++HIG GR G+S S L Sbjct: 123 LLIENGAVVGVKSTLGKEYKASKVILTTGTFLQGLVHIGTHTSQNGRFGESASIELAKHL 182 Query: 187 MKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTN 246 + GRLKTGT RL G +I + + E F D FS T Q+ C IT TN Sbjct: 183 KTLGLEIGRLKTGTCPRLAGNSIDFTELEAHFGDFPPPKFSHKTKDFNPIQLPCFITYTN 242 Query: 247 LETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVY 306 +TH +I +N + ++SG I+ GPRYCPSIEDKI RF ++ HQ+FLEP+ + Y Sbjct: 243 SKTHALIEQNFHLAPMFSGQIEGVGPRYCPSIEDKIYRFKDKERHQLFLEPQTKSGSEYY 302 Query: 307 PNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLA 366 NG+ST+LP +Q Q I +I GLE +I R GYAIEYD+I P L +LE+K+I L+LA Sbjct: 303 VNGLSTSLPFHLQEQVIHSIKGLEHAHITRYGYAIEYDFIQPTGLEYSLESKQIKNLYLA 362 Query: 367 GQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRM 426 GQINGTTGYEEAAAQGL+AGIN+ + R ++YIGVMIDDL SKG EPYRM Sbjct: 363 GQINGTTGYEEAAAQGLLAGINACLTLQNKPPLILRRDEAYIGVMIDDLVSKGTQEPYRM 422 Query: 427 FTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL--LKSLVLT 484 FTSRAEYR+ LR DNA RL LG + E+ + K Q+ ++L LK+ T Sbjct: 423 FTSRAEYRLLLREDNARWRLCKYAYALGLMSEKEHAKLQK--QQDQITKALENLKNTHFT 480 Query: 485 -SKNLSSTSISFKQDG-KTRTAYEFLSYPD-FSIQNLFSICPDARKFSSLVIERLQIESS 541 SK Q+G + FL+ D S++ L S+ + V+E+++I Sbjct: 481 PSKETLQKLQDLGQEGINDKCNGVFLAGRDSCSVEILSSLFSFLQNLEPEVLEQVKIACK 540 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y +Y +Q ++ + IP DF + +P L E EKL +P +L +AS+I G+ Sbjct: 541 YHSYIEKQSASIARMEQMLQNKIPSDFVFHKIPGLGLEAIEKLERFRPKSLFEASQISGI 600 Query: 602 TPAALNLLLIYIKKNT 617 TP+ L +L +Y+ +T Sbjct: 601 TPSNLEVLQLYLHLHT 616 >gi|330997306|ref|ZP_08321159.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Paraprevotella xylaniphila YIT 11841] gi|329571101|gb|EGG52808.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Paraprevotella xylaniphila YIT 11841] Length = 623 Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust. Identities = 264/624 (42%), Positives = 370/624 (59%), Gaps = 19/624 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAGCEAAA +A +GA T L+T + IG MSCNPA+GG+ KG +VREIDAL Sbjct: 5 YDVIVIGGGHAGCEAAAASANMGAQTCLVTMDMNKIGQMSCNPAVGGIAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG V D IQFR+LN KGPA+ PR Q DR + A + + + NL + Q +V Sbjct: 65 GGYMGIVTDRTAIQFRMLNRSKGPAMWSPRAQCDRGKFIWAWREILENTPNLHIWQDQVK 124 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E ++ + + IR V+LT GTFL G++HIG ++P GR+ + S L S Sbjct: 125 ELLVEHGEVTGVKTYFDVTIRARCVILTAGTFLNGLMHIGHTQLPGGRVAEPASYHLTES 184 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + GR+KTGTP R+DG+++ +++ E Q + FSFM +Q+ C T Sbjct: 185 IACHGINYGRMKTGTPVRIDGRSVHFEEMEIQEGEHDYHKFSFMGRDRQLKQLPCWTCFT 244 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N E H ++ + S +Y+G I+S GPRYCPSIE K+V F ER HQ+FLEPEG +T Sbjct: 245 NPEVHEVLRSGLPDSPLYNGQIQSIGPRYCPSIETKLVTFPERGQHQLFLEPEGESTQEY 304 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG S++LP IQ + ++ IP + I RPGYAIEYDY +P +L+ TLE+K + GLF+ Sbjct: 305 YLNGFSSSLPLHIQIEALKKIPAFRDLAIYRPGYAIEYDYFDPTQLYHTLESKILPGLFM 364 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ+NGTTGYEEA QG+VAGIN+A K + + R +SYIGV+IDDL +KGV EPYR Sbjct: 365 AGQVNGTTGYEEAGGQGIVAGINAALKCSGGEPFIMHRDESYIGVLIDDLVTKGVDEPYR 424 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAEYRI LR D+AD RLT ++G R + + + S K L Sbjct: 425 MFTSRAEYRILLRQDDADARLTERSYQIGLATRERYDHWLSKKEAVEHIVSFCKDFSLKP 484 Query: 486 -------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSL------ 531 + L +T + + +E ++ P +++N+ I P +L Sbjct: 485 ALINPGLEALGTTPLKYGC-----KLFELINRPQITVKNIAEHITPLKALLDTLTDRRDE 539 Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 +IE ++ Y Y R+ I A +++ E I FDY S+ +LS E ++KL + P Sbjct: 540 IIEAAEVLIKYDGYIARERIIADKMQRLESIKIKGRFDYKSMISLSTEARQKLEKINPET 599 Query: 592 LLQASKIEGMTPAALNLLLIYIKK 615 L QA +I G++P+ +N+LL+ + + Sbjct: 600 LAQAGRIPGVSPSDINVLLVLLGR 623 >gi|81429489|ref|YP_396490.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus sakei subsp. sakei 23K] gi|123563598|sp|Q38UF0|MNMG_LACSS RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|78611132|emb|CAI56185.1| Cell division protein GidA [Lactobacillus sakei subsp. sakei 23K] Length = 630 Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust. Identities = 269/620 (43%), Positives = 368/620 (59%), Gaps = 9/620 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAG EAA AA++G T L+T + M CNP++GG KG +VREIDAL Sbjct: 9 YDVIVVGAGHAGSEAALAAARMGRETLLLTINLDMVAFMPCNPSLGGPAKGIVVREIDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MGR D IQ R+LN KGPAVR R QAD+ Y M+R I + E+L + QG Sbjct: 69 GGQMGRNIDKTYIQMRMLNTGKGPAVRALRAQADKHAYHRTMKRTIETTEHLTLRQGIAE 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + IV + +V+LT GT RG I IG+L +G PS L S Sbjct: 129 SLIVEDGVCKGIVTNTGARYSADSVILTAGTASRGKIIIGELTYSSGPNNSIPSIKLSES 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 F R KTGTP R+DG TI + KTE+Q D+ FSF T Q+ C +T Sbjct: 189 LEDNGFVLTRFKTGTPPRVDGTTIDFSKTEEQPGDKEPNHFSFETPDSAYLKDQLSCWMT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH++I +N+ + +++G I+ GPRYCPSIEDKIVRF ++ HQIFLEPEG T+ Sbjct: 249 YTNDTTHQVIRDNLDRAPMFTGVIEGVGPRYCPSIEDKIVRFADKPRHQIFLEPEGRETE 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 Y ST++PEEIQH+ I +I GLE ++RPGYAIEYD + P +L PTLETK + L Sbjct: 309 EYYVGDFSTSMPEEIQHKMIHSIEGLENAQMMRPGYAIEYDVVEPWQLKPTLETKVVENL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQ+NGT+GYEEAA QGL+AGIN+A K D R+++YIGV+IDDL +KG EP Sbjct: 369 YTAGQMNGTSGYEEAAGQGLMAGINAALKQTGRDPFILDRSEAYIGVLIDDLVTKGTKEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR-----QKRFAKYIQEYNFLRSLL 478 YR+ TSRAEYR+ LR DNAD RLT G +LG I + R K+ A + + L Sbjct: 429 YRLLTSRAEYRLMLRHDNADLRLTEKGHELGLINDDRFDSYEVKKAAVEAELARLEKIRL 488 Query: 479 KSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 K L++ + +DG A +FL P+ +L P + V+E+++I Sbjct: 489 KPTPEIQAFLAAKGEAPLKDGV--LASDFLKRPEVKYADLIQFIPAVEGIDNRVVEQVEI 546 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + YA Y ++ + ++K E + IP + DY ++ L+ E ++KL ++P L QAS+I Sbjct: 547 QVKYAGYIDKEKAKIAKLKRMEAKKIPANIDYDAIEGLATEGRQKLQKIQPETLAQASRI 606 Query: 599 EGMTPAALNLLLIYIKKNTV 618 G+ PA + +L +YI++ + Sbjct: 607 GGVNPADIGILSVYIQQGKI 626 >gi|86151119|ref|ZP_01069335.1| glucose inhibited division protein A [Campylobacter jejuni subsp. jejuni 260.94] gi|315124654|ref|YP_004066658.1| glucose inhibited division protein A [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85842289|gb|EAQ59535.1| glucose inhibited division protein A [Campylobacter jejuni subsp. jejuni 260.94] gi|315018376|gb|ADT66469.1| glucose inhibited division protein A [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 619 Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust. Identities = 271/618 (43%), Positives = 370/618 (59%), Gaps = 15/618 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EA+A AA++G T L+T IG+ SCNPAIGGL KGHLV+E+DA+ Sbjct: 2 FDVIVIGGGHAGVEASAAAARMGKKTLLLTTLIEQIGAASCNPAIGGLAKGHLVKELDAM 61 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLMG + D AGIQFR+LN KG AV+G R Q D + YR+ + ++L NL++ Q + + Sbjct: 62 GGLMGEITDEAGIQFRILNESKGVAVQGSRAQIDMDKYRIIARNKLLKLPNLEISQEQAS 121 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + ++ V+LTTGTFL G+IH+G+ K+ AGR+G+ S +L N Sbjct: 122 VLIVENDEVKGVKTNLENIYFAKKVILTTGTFLNGLIHVGENKLQAGRVGELASVNLGNY 181 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 GRLKTGT R+D K+I + E Q D FSF + Q+ C I RT Sbjct: 182 LQTLGLKMGRLKTGTCPRVDAKSIDFSVLEIQDGDVNPKAFSFRSRNFNPTQLPCYIART 241 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N TH II N + +++G I+ GPRYCPSIEDKI RF ++ H +F+EP+ ++ Sbjct: 242 NTTTHEIIKNNFYRAPLFTGQIEGVGPRYCPSIEDKINRFSDKESHHLFIEPQTIDATEY 301 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG ST+LP E+Q Q +R++ G E I R GYAIEYDYI P EL TLE KKI L+ Sbjct: 302 YINGFSTSLPYEVQTQMLRSVKGFENAKITRFGYAIEYDYIEPTELKHTLELKKIKNLYC 361 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAAAQG +AGIN++ + + + R ++YIGV+IDDL KG EPYR Sbjct: 362 AGQINGTTGYEEAAAQGFMAGINASLSIDMKEPLILRRDEAYIGVLIDDLVVKGTKEPYR 421 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL-VLT 484 MFTSRAE+R+ LR +NA RL G LG + E+ YIQ N +L K L L Sbjct: 422 MFTSRAEFRLLLREENAILRLGKYGYDLGLLSEQD----FTYIQ--NIANNLQKGLEFLL 475 Query: 485 SKNLSST--------SISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 SK + S+ + + ++ F I+ L + P + + Sbjct: 476 SKEFTPNNQNNAFLESLGEDKISSIVNLQKIVARASFDIEKLKKLDPIFETMDHYSLREI 535 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 E+ Y Y Q + +++K + IP++FD+ S+ LSNE+ EKL+ KP + AS Sbjct: 536 LNEAKYYHYISMQKAQVEKMKNLSELKIPENFDFKSVSGLSNEVVEKLNHHKPPTIFAAS 595 Query: 597 KIEGMTPAALNLLLIYIK 614 +I G+TPAAL++L IYIK Sbjct: 596 QISGITPAALDILQIYIK 613 >gi|57238060|ref|YP_179309.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Campylobacter jejuni RM1221] gi|73621003|sp|Q5HTS6|MNMG_CAMJR RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|57166864|gb|AAW35643.1| glucose inhibited division protein A [Campylobacter jejuni RM1221] gi|315058620|gb|ADT72949.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Campylobacter jejuni subsp. jejuni S3] Length = 619 Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust. Identities = 272/624 (43%), Positives = 372/624 (59%), Gaps = 15/624 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EA+A AA++G T L+T IG+ SCNPAIGGL KGHLV+E+DA+ Sbjct: 2 FDVIVIGGGHAGVEASAAAARMGKKTLLLTTLIEQIGAASCNPAIGGLAKGHLVKELDAM 61 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLMG + D AGIQFR+LN KG AV+G R Q D + YR+ + ++L NL++ Q + + Sbjct: 62 GGLMGEITDEAGIQFRILNESKGVAVQGSRAQIDMDKYRIIARNKLLKLPNLEISQEQAS 121 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + ++ V+LTTGTFL G+IH+G+ K+ AGR+G+ S +L N Sbjct: 122 VLIVENDEVKGVKTNLENIYFAKKVILTTGTFLNGLIHVGENKLQAGRVGELASVNLGNY 181 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 GRLKTGT R+D K+I + E Q D FSF + Q+ C I RT Sbjct: 182 LQTLGLKMGRLKTGTCPRVDAKSIDFSVLEIQDGDVNPKAFSFRSRNFNPTQLPCYIART 241 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N TH II N + +++G I+ GPRYCPSIEDKI RF ++ H +F+EP+ ++ Sbjct: 242 NTTTHEIIKNNFYRAPLFTGQIEGVGPRYCPSIEDKINRFSDKESHHLFIEPQTIDATEY 301 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG ST+LP E+Q Q +R++ G E I R GYAIEYDYI P EL TLE KKI L+ Sbjct: 302 YINGFSTSLPYEVQTQMLRSVKGFENAKITRFGYAIEYDYIEPTELKHTLELKKIKNLYC 361 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAAAQG +AGIN++ + + + R ++YIGV+IDDL KG EPYR Sbjct: 362 AGQINGTTGYEEAAAQGFMAGINASLSIDMKEPLILRRDEAYIGVLIDDLVVKGTKEPYR 421 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL-VLT 484 MFTSRAE+R+ LR +NA RL G LG + E+ YIQ N +L K L L Sbjct: 422 MFTSRAEFRLLLREENAILRLGKYGYDLGLLSEQD----FTYIQ--NIANNLQKGLEFLL 475 Query: 485 SKNLSST--------SISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 SK + S+ + + ++ F I+ L + P + + Sbjct: 476 SKEFTPNNQNNAFLESLGEDKISSIVNLQKIVARASFDIEKLKKLDPIFETMDHYSLREI 535 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 E+ Y Y Q + +++K + IP++FD+ S+ LSNE+ EKL+ KP + AS Sbjct: 536 LNEAKYYHYISMQKAQVEKMKNLSELKIPENFDFKSVSGLSNEVVEKLNHHKPPTIFAAS 595 Query: 597 KIEGMTPAALNLLLIYIKKNTVKL 620 +I G+TPAAL++L IYIK K+ Sbjct: 596 QISGITPAALDILQIYIKMQKKKV 619 >gi|23009716|ref|ZP_00050662.1| COG0445: NAD/FAD-utilizing enzyme apparently involved in cell division [Magnetospirillum magnetotacticum MS-1] Length = 389 Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust. Identities = 246/379 (64%), Positives = 295/379 (77%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+GGGHAG EAAA AA++GA TAL+TH+ +TIG+MSCNPAIGGLGKGHLVRE+DA Sbjct: 7 SYDVIVVGGGHAGVEAAAAAARVGARTALVTHRAATIGAMSCNPAIGGLGKGHLVREVDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRVADAAGIQFR+LN +KGPAVRGPRTQADR LY AMQR + L VI+GE Sbjct: 67 LDGLMGRVADAAGIQFRLLNRRKGPAVRGPRTQADRALYAAAMQRAVAETPGLTVIEGEA 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + ++ ++ D + + VV+TTGTFLRG+IHIG+ +IPAGR+G+ P+ L Sbjct: 127 EDLVVAEGRVAGAILTDGRTLTAAAVVITTGTFLRGLIHIGERQIPAGRVGEGPAVGLAQ 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + + F GRLKTGTPARLDG+TI W E Q ADE +PFS +T++IT QI CGITR Sbjct: 187 TLDRHGFRLGRLKTGTPARLDGRTIDWASLEMQHADEDPVPFSTLTERITTPQIACGITR 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T TH +I N+ S +YSG I S GPRYCPSIEDK+VRFG+R GHQIFLEPEGL+ Sbjct: 247 TTQATHDLIRANLHRSPMYSGGISSRGPRYCPSIEDKVVRFGDREGHQIFLEPEGLDDPT 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGISTALPEE+Q I +IPGLE+ I+RPGYAIEYDY++P+EL TL+ K++ GLF Sbjct: 307 VYPNGISTALPEEVQAGIIASIPGLERTRILRPGYAIEYDYVDPRELDATLQAKRLPGLF 366 Query: 365 LAGQINGTTGYEEAAAQGL 383 LAGQINGTTGYEEAA QGL Sbjct: 367 LAGQINGTTGYEEAAGQGL 385 >gi|328463991|gb|EGF35489.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus helveticus MTCC 5463] Length = 661 Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust. Identities = 265/614 (43%), Positives = 360/614 (58%), Gaps = 5/614 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAA +A +G T L+T + M CNP++GG KG +VREIDAL Sbjct: 10 YDVIVVGAGHAGCEAALASAHMGQKTLLVTIGLDMVAFMPCNPSVGGPAKGTVVREIDAL 69 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ DA IQ R+LN KGPAVR R QAD+ Y M+ I + NL + Q V Sbjct: 70 GGQMGKNIDATYIQMRMLNTGKGPAVRALRAQADKWQYHEHMKDTIENTPNLTLRQAIVD 129 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + ++ + +VVLTTGT RG I IG+L +G +PS L + Sbjct: 130 QLVVEDGVCKGVITNTGAKYHAKSVVLTTGTAARGKIIIGELTYSSGPNNTTPSIKLSEN 189 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--NRQIECGIT 243 K F R KTGTP R++G TI + KTE++ D+ FS+ + + QI C +T Sbjct: 190 LEKLGFKLRRFKTGTPPRVNGNTIDYSKTEEEPGDKTPRHFSYESKDVDYLKNQISCWMT 249 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II EN+ + ++SG IK GPRYCPSIEDK+VRF +++ HQIFLEPEG T Sbjct: 250 YTNNGTHEIIRENLNRAPMFSGIIKGVGPRYCPSIEDKVVRFADKDRHQIFLEPEGRTTK 309 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY ST++PEEIQ + + ++ GLE ++RPGYAIEYD + P +L TLETK I L Sbjct: 310 EVYVGDFSTSMPEEIQLKMVHSVAGLEHAEMMRPGYAIEYDVVEPWQLKHTLETKNIKHL 369 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ+NGT+GYEEAA QGL+AGIN+A + R D+YIGV+IDDL +KG EP Sbjct: 370 FTAGQMNGTSGYEEAAGQGLIAGINAALSAQDKPGFTLGRNDAYIGVLIDDLVTKGTNEP 429 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL-V 482 YR+ TSRAEYR+ LR DNAD RLT G +LG I + R ++F + Q + L + V Sbjct: 430 YRLLTSRAEYRLILRHDNADLRLTEYGHELGLISDERYEKFEEKKQAIRDAKERLHEITV 489 Query: 483 LTSKNLSSTSISFKQDGKTR--TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 S ++ S Q+ A FL P+ I ++ + + V E+++I Sbjct: 490 HLSDDVQEFLKSIGQEPMKAGVKADVFLRRPNVKIADIERLTGEKIPGDRYVKEQVEIGI 549 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 YA Y ++ +K +E + IP D DY + L+ E ++K ++P L QA +I G Sbjct: 550 KYAGYIKKEETRIARLKRQEAKKIPADIDYEMIEGLATEARQKFEKIRPETLAQAERISG 609 Query: 601 MTPAALNLLLIYIK 614 + PA L +L +YI+ Sbjct: 610 VNPADLAILSVYIQ 623 >gi|291561653|emb|CBL40452.1| glucose-inhibited division protein A [butyrate-producing bacterium SS3/4] Length = 649 Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust. Identities = 263/653 (40%), Positives = 384/653 (58%), Gaps = 48/653 (7%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 ++ +YD++V+G GHAGCEAA AA+LG T + T +I M CNP +GG KGHLVR Sbjct: 3 VVEETYDIVVVGAGHAGCEAALAAARLGFETIMFTVSVDSIALMPCNPNVGGSSKGHLVR 62 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DAL G MG+ D IQ ++LN KGPAV R QAD++ Y +M+R + + ++L + Sbjct: 63 ELDALGGEMGKNIDKTFIQSKMLNESKGPAVHSLRAQADKQEYTRSMRRVLENTDHLTIR 122 Query: 121 QGEVAGFNTE-----------------------KNIISSIVMQDNSMIRCSTVVLTTGTF 157 Q EVA TE K I + ++ +C VVL TG + Sbjct: 123 QAEVAEILTEEIPGEYGTFQEEHEGHQESGYPVKKRIVGVKTYSGAVYKCRAVVLATGVY 182 Query: 158 LRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQ 217 LR G + P G G +N L +S + R KTGTPAR D ++I + K E+Q Sbjct: 183 LRARCIYGNVSNPTGPNGLQAANHLTDSLKANGIEMYRFKTGTPARADKRSIDFSKMEEQ 242 Query: 218 FADERLIPFSFMTD--KITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYC 275 F D+R++PFSF TD + QI C +T TN +TH II N+ S ++SG I+ GPRYC Sbjct: 243 FGDKRVVPFSFSTDPESVQKEQISCWLTYTNEKTHEIIRNNLDRSPLFSGAIEGTGPRYC 302 Query: 276 PSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNII 335 PSIEDK+V+F ++ HQ+F+EPEGL T+ +Y G+S++LPE++Q+ RT+PGLE V I+ Sbjct: 303 PSIEDKVVKFPDKGRHQVFVEPEGLYTNEMYLGGMSSSLPEDVQYAMYRTVPGLENVKIV 362 Query: 336 RPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNK 395 R YAIEYD INP++L +LE K I GLF GQ NG++GYEEAA QG +AG+N+ARK + Sbjct: 363 RNAYAIEYDCINPRQLKASLEFKNIDGLFSGGQFNGSSGYEEAAVQGFMAGVNAARKLQE 422 Query: 396 LDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGC 455 + R+ +YIGV+IDDL +K EPYRM TSRAEYR+ LR DNAD RL IG ++G Sbjct: 423 KSAVVLDRSQAYIGVLIDDLVTKENHEPYRMMTSRAEYRLLLRQDNADLRLRGIGHEIGL 482 Query: 456 IGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSIS--------FKQDGKT-----R 502 + E ++Y ++ K++ K L ++ ++ G T Sbjct: 483 VSE----------EQYEYVLWKEKAIEEEIKRLEKATVGANEKVQEFLEKHGSTSLKSGS 532 Query: 503 TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKR 562 T E + P+ + + L + + + V E++ I Y Y RQ + + K E R Sbjct: 533 TLAELIKRPELNYEMLAELDEKRPELPADVREQVDINLKYDGYIRRQKQQVAQFKKLEGR 592 Query: 563 LIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 IP D DY+++ +L E +KL++ KP N+ QAS+I G++PA +++L++++++ Sbjct: 593 KIPVDLDYTTVGSLRREAVQKLNLYKPENIGQASRISGVSPADISVLMVHLEQ 645 >gi|260101883|ref|ZP_05752120.1| glucose-inhibited division protein A [Lactobacillus helveticus DSM 20075] gi|260084311|gb|EEW68431.1| glucose-inhibited division protein A [Lactobacillus helveticus DSM 20075] Length = 661 Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust. Identities = 265/614 (43%), Positives = 360/614 (58%), Gaps = 5/614 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAA +A +G T L+T + M CNP++GG KG +VREIDAL Sbjct: 10 YDVIVVGAGHAGCEAALASAHMGQKTLLVTIGLDMVAFMPCNPSVGGPAKGTVVREIDAL 69 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ DA IQ R+LN KGPAVR R QAD+ Y M+ I + NL + Q V Sbjct: 70 GGQMGKNIDATYIQMRMLNTGKGPAVRALRAQADKWQYHEHMKDTIENTPNLTLRQAIVD 129 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + ++ + +VVLTTGT RG I IG+L +G +PS L + Sbjct: 130 QLVVEDGVCKGVITNTGAKYHAKSVVLTTGTAARGKIIIGELTYSSGPNNTTPSIKLSEN 189 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--NRQIECGIT 243 K F R KTGTP R++G TI + KTE++ D+ FS+ + + QI C +T Sbjct: 190 LEKLGFKLRRFKTGTPPRVNGNTIDYSKTEEEPGDKTPRHFSYESKDVDYLKNQISCWMT 249 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II EN+ + ++SG IK GPRYCPSIEDK+VRF +++ HQIFLEPEG T Sbjct: 250 YTNNGTHEIIRENLNRAPMFSGIIKGVGPRYCPSIEDKVVRFADKDRHQIFLEPEGRTTK 309 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY ST++PEEIQ + + ++ GLE ++RPGYAIEYD + P +L TLETK I L Sbjct: 310 EVYVGDFSTSMPEEIQLKMVHSVAGLEHAEMMRPGYAIEYDVVEPWQLKHTLETKNIKHL 369 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ+NGT+GYEEAA QGL+AGIN+A + R D+YIGV+IDDL +KG EP Sbjct: 370 FTAGQMNGTSGYEEAAGQGLIAGINAALSAQDKPGFTLGRNDAYIGVLIDDLVTKGTNEP 429 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL-V 482 YR+ TSRAEYR+ LR DNAD RLT G +LG I + R ++F + Q + L + V Sbjct: 430 YRLLTSRAEYRLILRHDNADLRLTEYGHELGLISDERYEKFEEKKQAIRDAKEKLHEITV 489 Query: 483 LTSKNLSSTSISFKQDGKTR--TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 S ++ S Q+ A FL P+ I ++ + + V E+++I Sbjct: 490 HLSDDVQEFLKSIGQEPMKAGVKADVFLRRPNVKIADIERLTGEKIPGDRYVKEQVEIGI 549 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 YA Y ++ +K +E + IP D DY + L+ E ++K ++P L QA +I G Sbjct: 550 KYAGYIKKEETRIARLKRQEAKKIPADIDYEMIEGLATEARQKFEKIRPETLAQAERISG 609 Query: 601 MTPAALNLLLIYIK 614 + PA L +L +YI+ Sbjct: 610 VNPADLAILSVYIQ 623 >gi|88596189|ref|ZP_01099426.1| glucose inhibited division protein A [Campylobacter jejuni subsp. jejuni 84-25] gi|88191030|gb|EAQ95002.1| glucose inhibited division protein A [Campylobacter jejuni subsp. jejuni 84-25] Length = 619 Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust. Identities = 271/618 (43%), Positives = 370/618 (59%), Gaps = 15/618 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EA+A AA++G T L+T IG+ SCNPAIGGL KGHLV+E+DA+ Sbjct: 2 FDVIVIGGGHAGVEASAAAARMGKKTLLLTTLIEQIGAASCNPAIGGLAKGHLVKELDAM 61 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLMG + D AGIQFR+LN KG AV+G R Q D + YR+ + ++L NL++ Q + + Sbjct: 62 GGLMGEITDEAGIQFRILNESKGVAVQGSRAQIDMDKYRIITRNKLLKLSNLEISQEQAS 121 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + + V+LTTGTFL G+IH+G+ K+ AGR+G+ S +L N Sbjct: 122 ALIVENDEVKGVKTNLENTYFAKKVILTTGTFLNGLIHVGENKLQAGRVGELASVNLGNY 181 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 GRLKTGT R+D K+I + E Q D FSF + Q+ C I RT Sbjct: 182 LQTLGLKMGRLKTGTCPRVDAKSIDFSVLEIQDGDVNPKAFSFRSRNFNPTQLPCYIART 241 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N TH II N + +++G I+ GPRYCPSIEDKI RF ++ H +F+EP+ ++ Sbjct: 242 NTTTHEIIKNNFYRAPLFTGQIEGVGPRYCPSIEDKINRFSDKESHHLFIEPQTIDATEY 301 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG ST+LP E+Q Q +R++ G E I R GYAIEYDYI P EL TLE KKI L+ Sbjct: 302 YINGFSTSLPYEVQIQMLRSVKGFENAKITRFGYAIEYDYIEPTELKHTLELKKIKNLYC 361 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAAAQG +AGIN++ + + + R ++YIGV+IDDL KG EPYR Sbjct: 362 AGQINGTTGYEEAAAQGFMAGINASLSIDMKEPLILRRDEAYIGVLIDDLVVKGTKEPYR 421 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL-VLT 484 MFTSRAE+R+ LR +NA RL G LG + E+ YIQ N +L K L L Sbjct: 422 MFTSRAEFRLLLREENAILRLGKYGYDLGLLSEQD----FTYIQ--NIANNLQKGLEFLL 475 Query: 485 SKNLSST--------SISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 SK + S+ + + ++ F I+ L + P + + + Sbjct: 476 SKEFTPNNQNNAFLESLGEDKISSIVNLQKIVARASFDIEKLKKLDPIFEIMDNYSLREI 535 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 E+ Y Y Q + +++K + IP++FD+ S+ LSNE+ EKL+ KP + AS Sbjct: 536 LNEAKYYHYISMQKAQVEKMKNLSELKIPENFDFKSVSGLSNEVVEKLNHHKPPTIFAAS 595 Query: 597 KIEGMTPAALNLLLIYIK 614 +I G+TPAAL++L IYIK Sbjct: 596 QISGITPAALDILQIYIK 613 >gi|121613192|ref|YP_001000863.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Campylobacter jejuni subsp. jejuni 81-176] gi|167005775|ref|ZP_02271533.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Campylobacter jejuni subsp. jejuni 81-176] gi|218562800|ref|YP_002344579.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|21263699|sp|Q9PNA7|MNMG_CAMJE RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|166222922|sp|A1W0H2|MNMG_CAMJJ RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|87249308|gb|EAQ72269.1| glucose inhibited division protein A [Campylobacter jejuni subsp. jejuni 81-176] gi|112360506|emb|CAL35303.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|315927247|gb|EFV06592.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 619 Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust. Identities = 271/618 (43%), Positives = 370/618 (59%), Gaps = 15/618 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EA+A AA++G T L+T IG+ SCNPAIGGL KGHLV+E+DA+ Sbjct: 2 FDVIVIGGGHAGVEASAAAARMGKKTLLLTTLIEQIGAASCNPAIGGLAKGHLVKELDAM 61 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLMG + D AGIQFR+LN KG AV+G R Q D + YR+ + ++L NL++ Q + + Sbjct: 62 GGLMGEITDEAGIQFRILNESKGVAVQGSRAQIDMDKYRIIARNKLLKLPNLEISQEQAS 121 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + ++ V+LTTGTFL G+IH+G+ K+ AGR+G+ S +L N Sbjct: 122 VLIVENDEVKGVKTNLENIYFAKKVILTTGTFLNGLIHVGENKLQAGRVGELASVNLGNY 181 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 GRLKTGT R+D K+I + E Q D FSF + Q+ C I RT Sbjct: 182 LQTLGLKMGRLKTGTCPRVDAKSIDFSVLEIQDGDVNPKAFSFRSRNFNPTQLPCYIART 241 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N TH II N + +++G I+ GPRYCPSIEDKI RF ++ H +F+EP+ ++ Sbjct: 242 NTTTHEIIKNNFYRAPLFTGQIEGVGPRYCPSIEDKINRFSDKESHHLFIEPQTIDATEY 301 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG ST+LP E+Q Q +R++ G E I R GYAIEYDYI P EL TLE KKI L+ Sbjct: 302 YINGFSTSLPYEVQTQMLRSVEGFENAKITRFGYAIEYDYIEPTELKHTLELKKIKNLYC 361 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAAAQG +AGIN++ + + + R ++YIGV+IDDL KG EPYR Sbjct: 362 AGQINGTTGYEEAAAQGFMAGINASLSIDMKEPLILRRDEAYIGVLIDDLVVKGTKEPYR 421 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL-VLT 484 MFTSRAE+R+ LR +NA RL G LG + E+ YIQ N +L K L L Sbjct: 422 MFTSRAEFRLLLREENAILRLGKYGYDLGLLSEQD----FTYIQ--NIANNLQKGLEFLL 475 Query: 485 SKNLSST--------SISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 SK + S+ + + ++ F I+ L + P + + Sbjct: 476 SKEFTPNNQNNAFLESLGEDKISSIVNLQKIVARASFDIEKLKKLDPIFETMDHYSLREI 535 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 E+ Y Y Q + +++K + IP++FD+ S+ LSNE+ EKL+ KP + AS Sbjct: 536 LNEAKYYHYISMQKAQVEKMKNLSELKIPENFDFKSVSGLSNEVVEKLNHHKPPTIFAAS 595 Query: 597 KIEGMTPAALNLLLIYIK 614 +I G+TPAAL++L IYIK Sbjct: 596 QISGITPAALDILQIYIK 613 >gi|295425820|ref|ZP_06818501.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus amylolyticus DSM 11664] gi|295064513|gb|EFG55440.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus amylolyticus DSM 11664] Length = 631 Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust. Identities = 259/614 (42%), Positives = 361/614 (58%), Gaps = 5/614 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAA +A +G T ++T + M CNP++GG KG +VREIDAL Sbjct: 9 YDVIVVGAGHAGCEAALASAHMGLKTLVVTIGLDMVAFMPCNPSVGGPAKGTVVREIDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ DA IQ R+LN KGPAVR R QAD+ Y M+ I + NL + Q V Sbjct: 69 GGQMGKNIDATYIQMRMLNTGKGPAVRALRAQADKWQYHEHMKDVIENTPNLTLRQAIVD 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + + ++ + +VVLTTGT RG I IG+L +G P+ L + Sbjct: 129 QLVVKDGVCRGVITNTGAEYHAKSVVLTTGTAARGRIFIGELNYSSGPNNTIPAIKLSEN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--NRQIECGIT 243 K F R KTGTP R++G TI + KTE++ AD+ FS+ T Q+ C +T Sbjct: 189 LEKLGFKLRRFKTGTPPRVNGNTIDYSKTEEEPADKIPRHFSYETSDADYLKDQVSCWMT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH+II +N+ S ++SGDI GPRYCPSIE K+VRF ++N HQ+FLEPEG +T Sbjct: 249 YTNPTTHKIIRDNLDRSPMFSGDIVGVGPRYCPSIETKVVRFADKNRHQLFLEPEGRHTK 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY ST++PEE+Q + + T+ GLE ++RPGYAIEYD I P +L TLETK I L Sbjct: 309 EVYVGDFSTSMPEEVQLKMLHTVAGLEHAEMMRPGYAIEYDVIEPWQLKHTLETKNIKNL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ+NGT+GYEEAA QGL+AGIN+A ++ R ++YIGV+IDDL +KG EP Sbjct: 369 FTAGQMNGTSGYEEAAGQGLIAGINAALRAKGKPGFTLGRDEAYIGVLIDDLVTKGTNEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLTP G KLG I ++R F + +E + L ++ + Sbjct: 429 YRLLTSRAEYRLILRHDNADLRLTPYGHKLGLISDKRYAAFEEKKKEIAAAKEKLATITI 488 Query: 484 TSKNLSSTSISFKQDGKTRTAYE---FLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + + + K + FL P I ++ + + V E+++I Sbjct: 489 HPTDEVQEYLQNIGEDKLSAGLKADIFLRRPRVKIDDIEKLTGEKIADDRYVKEQVEINI 548 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 YA Y ++ + + +E + IP D DY ++ L+ E ++K ++P L QA +I G Sbjct: 549 KYAGYIKKEQVRIDRLHRQEAKKIPADIDYGAIEGLATEARQKFEKIRPETLAQAERISG 608 Query: 601 MTPAALNLLLIYIK 614 + PA L +L +YI+ Sbjct: 609 VNPADLAILSVYIQ 622 >gi|225028845|ref|ZP_03718037.1| hypothetical protein EUBHAL_03132 [Eubacterium hallii DSM 3353] gi|224953841|gb|EEG35050.1| hypothetical protein EUBHAL_03132 [Eubacterium hallii DSM 3353] Length = 627 Score = 486 bits (1251), Expect = e-135, Method: Compositional matrix adjust. Identities = 265/621 (42%), Positives = 371/621 (59%), Gaps = 29/621 (4%) Query: 12 GGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGR 71 G GHAGCEAA AA+LG T + T +++ M CNP IGG KGHLV+EIDAL G MG+ Sbjct: 14 GAGHAGCEAALAAARLGCETIIFTVSMNSVALMPCNPNIGGSSKGHLVKEIDALGGEMGK 73 Query: 72 VADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEK 131 D IQ ++LN KGPAV R QAD++ Y + M+ + + ++L + Q EV E Sbjct: 74 NIDKTYIQSKMLNKSKGPAVHSLRAQADKDAYSMTMRYTLQNTDHLTLRQAEVTELIVED 133 Query: 132 NIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDF 191 +I + ++ TVVL TGT+L+ G++ G G +N L S Sbjct: 134 GVIKGVKTFSGAIYHAKTVVLATGTYLKARCLYGEVVNYTGPNGLQAANYLSQSLKDNGV 193 Query: 192 DTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGITRTNLET 249 + R KTGTPAR+D +++ +D E+QF DE+++PFSF + I QI C +T TN ET Sbjct: 194 ELYRFKTGTPARIDKRSVNFDVMEEQFGDEKIVPFSFTNKEEDIKREQISCWLTYTNEET 253 Query: 250 HRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNG 309 H+II +N+ S IY+G I+ GPRYCPSIEDK+VRF +R HQ+F+EPEG T+ +Y G Sbjct: 254 HKIIRDNLDRSPIYAGVIEGTGPRYCPSIEDKVVRFADRKRHQLFIEPEGEFTNEMYVGG 313 Query: 310 ISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQI 369 +S++LPE++Q+ RT+ GLE V IIR YAIEYD INP +L +LE + I GLF GQ Sbjct: 314 MSSSLPEDVQYAMYRTVKGLENVKIIRNAYAIEYDCINPNQLKLSLEFRNIQGLFSGGQF 373 Query: 370 NGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTS 429 NG++GYEEAA QGL+AGIN+ARK D + R+ +YIGV+IDDL +K EPYRM TS Sbjct: 374 NGSSGYEEAACQGLIAGINAARKCLGKDPVILDRSQAYIGVLIDDLVTKENHEPYRMMTS 433 Query: 430 RAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF-------AKYIQEYNF--------L 474 RAEYR+ LR DNAD RLTPIG ++G I + R +F K I+ + Sbjct: 434 RAEYRLLLRQDNADMRLTPIGHEIGLIDDERYDKFLLKKEQIEKEIERLKHVNIGANKTV 493 Query: 475 RSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIE 534 + LL+SL T N S T E + P+ + + L I PD V E Sbjct: 494 QELLESLGSTKLNSGS------------TLEELIKRPELNYECLAPIDPDREPLDDDVAE 541 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 ++ I Y Y RQ+ + ++ K E +LIP +Y + L E +KL + P ++ Q Sbjct: 542 QININIKYEGYIKRQLQQVEQFKKMENKLIPDTINYDEVHNLRTEAVQKLKAVHPHSVGQ 601 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G++P+ +++L+IY+++ Sbjct: 602 ASRISGVSPSDISVLMIYMEQ 622 >gi|328958784|ref|YP_004376170.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [Carnobacterium sp. 17-4] gi|328675108|gb|AEB31154.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [Carnobacterium sp. 17-4] Length = 631 Score = 486 bits (1251), Expect = e-135, Method: Compositional matrix adjust. Identities = 263/621 (42%), Positives = 381/621 (61%), Gaps = 9/621 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+G GHAG EAA AA++G+ T LIT + M CNP+IGG KG +VREIDA Sbjct: 8 NFDVIVVGAGHAGSEAALAAARMGSHTLLITINLDMVAFMPCNPSIGGPAKGVVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ +Y M++ I ENL + QG Sbjct: 68 LGGEMGRNIDKTYIQMRMLNTGKGPAVRALRAQADKFMYANEMKKTIEETENLVLRQGIA 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E I I+ ++ R V+LT GT RG I IG+LK +G PS L Sbjct: 128 DELIIEDGICKGIITNTGAIYRSKAVILTAGTSSRGQIIIGELKYSSGPNNSQPSVKLSE 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--NRQIECGI 242 S ++ F+ R KTGTP R+ TI + TE+Q D++ FS+ T + Q+ C + Sbjct: 188 SLLENGFELNRFKTGTPPRVKSSTIDYSVTEEQPGDKKANHFSYETPNSSYLKDQLSCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH+ I +N+ + +++G ++ G RYCPSIEDK+VRF ++ HQ+FLEPEG +T Sbjct: 248 TYTNESTHQKIQDNLHRAPMFTGIVEGVGARYCPSIEDKVVRFSDKPRHQLFLEPEGRDT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q I +I GLE ++R GYAIEYD + P +L P+LETK + Sbjct: 308 EEVYVQGLSTSLPEDVQQDIIHSIEGLENAEMMRTGYAIEYDVVTPHQLRPSLETKVVEN 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQ+NGT+GYEEAA QG++AG+N+A K + R++ YIGVMIDDL +KG E Sbjct: 368 LFTAGQMNGTSGYEEAAGQGIMAGMNAALKVQGKEPFVMKRSEGYIGVMIDDLVTKGTNE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF----AKYIQEYNFLRSL- 477 PYR+ TSRAEYR+ LR DNAD RLT IG ++G + + R F A++ E + L S+ Sbjct: 428 PYRLLTSRAEYRLLLRHDNADFRLTEIGHQIGLVTKERYDTFVAKKAQFEGEIDRLGSIR 487 Query: 478 LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 LK L+ + + +DG A +FL P+ S Q+L + P + V E+++ Sbjct: 488 LKPTAEIQTYLTENNQAPLKDGI--LAKDFLRRPEVSYQDLLAFVPRDYELPLAVEEQVE 545 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ Y Y + + ++K E + IP++ DY+++ ++ E KEKL ++P + QAS+ Sbjct: 546 IQVKYEGYIAKASQKVDKLKRMENKRIPENIDYAAINGIATEAKEKLIKIQPETIAQASR 605 Query: 598 IEGMTPAALNLLLIYIKKNTV 618 I G+ PA +++L++Y+++ + Sbjct: 606 ISGVNPADISILMVYVEQGKI 626 >gi|167518690|ref|XP_001743685.1| hypothetical protein [Monosiga brevicollis MX1] gi|163777647|gb|EDQ91263.1| predicted protein [Monosiga brevicollis MX1] Length = 651 Score = 486 bits (1251), Expect = e-135, Method: Compositional matrix adjust. Identities = 278/611 (45%), Positives = 379/611 (62%), Gaps = 14/611 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+VIGGGHAGCEAAA AA+ GA TAL+T K TIG MSCNP+ GG+GKG L+RE+DAL Sbjct: 44 YDVVVIGGGHAGCEAAAAAARTGARTALVTQKLETIGEMSCNPSFGGVGKGILLREVDAL 103 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+ + D AGI FRVLN KGPAV GPR Q DR +YR MQ+ + SQ NLD+I V Sbjct: 104 GGVAPTICDRAGIHFRVLNRSKGPAVWGPRAQIDRSIYRSEMQQHMASQPNLDLIAAAVE 163 Query: 126 GFNTE-KNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + ++ + + + +I VV+TTGTFLRGVI+IG PAGR G+ PS L Sbjct: 164 DITVNGDHQVTGVALGNGQIIGTRAVVVTTGTFLRGVINIGAYFTPAGRKGEGPSVGLAQ 223 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--NRQIECGI 242 + F F GRL+TGTP R+ T+ +D +Q +D PFS++ +++ + I+C + Sbjct: 224 TLETFGFKLGRLRTGTPPRIKKSTVCFDGLLEQPSDYPATPFSYLNERVALEDSFIQCHL 283 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN H+++ + + + D + GPRYCPSIE K N HQ++LEPEGL++ Sbjct: 284 THTNSAAHQLVHDTLHENNHVRQD--ALGPRYCPSIESKA------NRHQVWLEPEGLDS 335 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 DV+YPNGIS +PEE Q +F+R+I GLE I + GY + YD+++P++L TLETK I Sbjct: 336 DVIYPNGISMTMPEEAQLRFVRSIAGLENAQITQLGYGVSYDFVDPRQLHRTLETKMIHS 395 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LFLAGQINGTTGYEEAA+QG++AGIN+A K RT +YIGV+IDDL +KGVLE Sbjct: 396 LFLAGQINGTTGYEEAASQGIIAGINAALKVRGEPSFTVDRTQAYIGVLIDDLVTKGVLE 455 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+SLR DNAD RLT +G G + E R + F + +E L LL+S+ Sbjct: 456 PYRMFTSRAEYRLSLRSDNADTRLTALGHACGAVDEPRFQHFCQQQKELAELTQLLESVE 515 Query: 483 LTSKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 LT +S K + +++ S + P R F+ ++ER++IE Sbjct: 516 LTPHEWNSGGWYNSLRCGLLKPCSVASMMAFGFVSDSTAADLVPALRSFNPRLVERVKIE 575 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + YA RQ A+ + + IP F + + +L E E+L P + A++I+ Sbjct: 576 AMYAHMMNRQRASAESYRRQASLEIPPGFAFEKVHSLPLEALERLREHAPRTIGDAAQIQ 635 Query: 600 GMTPAALNLLL 610 G+TP AL L+ Sbjct: 636 GITPDALARLV 646 >gi|293399749|ref|ZP_06643895.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291306149|gb|EFE47392.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 624 Score = 486 bits (1251), Expect = e-135, Method: Compositional matrix adjust. Identities = 257/614 (41%), Positives = 372/614 (60%), Gaps = 7/614 (1%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALD 66 DVIVIGGGHAG EAA A+L T L + I SM CNP++GG KG +VREIDAL Sbjct: 3 DVIVIGGGHAGVEAALACARLQKETILYSMHIDMIASMPCNPSVGGPAKGIVVREIDALG 62 Query: 67 GLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAG 126 G MG+ ADA +QF++LN KGP V+ R Q+D+ Y+ MQ+ +L+QE+L+V + V Sbjct: 63 GEMGKAADATALQFKMLNTTKGPGVQCLRVQSDKLAYKAYMQKVLLAQEHLEVREMCVEK 122 Query: 127 FNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSF 186 E ++ ++ D M C +++TTGTF+ I +G P+G G+ +N+L S Sbjct: 123 VIAEDGVVKGVLQADGHMEECKALIMTTGTFMSSNILVGHTSTPSGPDGEPTTNNLSQSL 182 Query: 187 MKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--NRQIECGITR 244 T RLKTGTPAR+ +I + KTE Q + + FS T I Q C +T Sbjct: 183 RDLGIRTFRLKTGTPARVLTSSIDFSKTEVQPGTDAFLCFSHETTNIRPFKEQALCYLTY 242 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHRII EN++ SA+YSG +K GPRYCPSIEDK+VRF ++ HQIFLEPE + D Sbjct: 243 TSPETHRIINENLERSAMYSGLVKGVGPRYCPSIEDKLVRFADKQRHQIFLEPESESLDT 302 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 Y G ST++P ++Q + ++PGLE I + YAIEYD I+P + PTLE K+I+ L+ Sbjct: 303 TYVQGFSTSMPHDVQEAMLHSLPGLENCVIKKYAYAIEYDAIDPLQCKPTLENKRIANLY 362 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAAAQGL+AGIN+ K + + R ++YIGVMIDDL +KG EPY Sbjct: 363 TAGQINGTSGYEEAAAQGLLAGINAVLKLDGKEPFILRRDEAYIGVMIDDLVTKGTKEPY 422 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLTP G +G I + R + F Q+ L ++ T Sbjct: 423 RLLTSRAEYRLLLRHDNADLRLTPYGHTIGLISDARYENFKGKEQQIIDCLEYLDTVRFT 482 Query: 485 SKNLSST---SISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 K+ +T + ++ + +A L P +++ L + F+ + ++++IE Sbjct: 483 PKSTVNTYMQELDYEPLKEGISAKTLLKRPKVTMEGLAPYL--EKTFAPAIAQQVEIEIK 540 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y + +A ++ + +P+ DY + LS E ++KL+ ++P + QAS+I G+ Sbjct: 541 YEGYIQKAKRDAAHLRQMDAVRLPEHIDYQQIQHLSLEARQKLNEVQPMTMGQASRISGV 600 Query: 602 TPAALNLLLIYIKK 615 PA + +L +Y+++ Sbjct: 601 NPADIAVLAVYLEQ 614 >gi|302380965|ref|ZP_07269426.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Finegoldia magna ACS-171-V-Col3] gi|302311186|gb|EFK93206.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Finegoldia magna ACS-171-V-Col3] Length = 627 Score = 486 bits (1250), Expect = e-135, Method: Compositional matrix adjust. Identities = 261/616 (42%), Positives = 372/616 (60%), Gaps = 9/616 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+V+G GHAGCEAA A+LG TA+++ ++ + CNP IGG GKGHLV+E+DAL Sbjct: 10 YDVVVVGAGHAGCEAALATARLGLKTAIMSISLDSVADLPCNPNIGGTGKGHLVKEVDAL 69 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG V D IQ R+LN KGPAV R QAD+ Y M+ + + ENLD+I+ EV Sbjct: 70 GGEMGLVIDKTYIQSRMLNTSKGPAVHSLRVQADKRKYHDEMKSVLENTENLDLIEAEVV 129 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E N I SI ++ V+L TGT+L+G++ +G+ +G G S L +S Sbjct: 130 DIGVEDNKIKSITTAQGAIFPTRAVILATGTYLKGLVMMGEYTYESGPHGMKSSKKLSDS 189 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KITNRQIECGIT 243 K + R KTGTPAR+ ++ ++ Q D+ +IPFSF+ D I+ +Q C +T Sbjct: 190 LKKLGIELRRFKTGTPARVHRDSLNYEVMTVQPGDDDVIPFSFLNDGKDISKKQEHCYLT 249 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 T L+T +II +N++ S +Y+G +K GPRYCPSIEDKIVRF +R+ HQ+FLEPEGL+T Sbjct: 250 YTTLKTKQIIEDNLERSPMYAGIVKGVGPRYCPSIEDKIVRFPDRDEHQVFLEPEGLSTK 309 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G+S+ LPEE+Q + +TI G E V +R Y IEYD I+P L TLE +I L Sbjct: 310 EMYIQGVSSTLPEEVQKEMYKTIIGFENVRFMRSAYGIEYDCIDPTILKRTLEHLEIKNL 369 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQING++GYEEAA QG++AGIN+A + R+D+YIGV+IDDL +KG EP Sbjct: 370 FFAGQINGSSGYEEAAGQGIIAGINAAMNLLGKEPFVLDRSDAYIGVLIDDLVTKGTNEP 429 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRM TSR EYR++LR DNAD RLT ++G + R ++ + + LKS+++ Sbjct: 430 YRMMTSRCEYRLTLRQDNADLRLTERAHEIGLATDERYEKMLHKKKTIDEEIERLKSIMV 489 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSY---PDFSIQNLFSICPDARKFSSLVIERLQIES 540 T ++ + + +T L P+ + DA + RLQ+E+ Sbjct: 490 TPTEETNEKLRNLGSSELKTGITLLDLIKRPELTYDKTEEF--DAERPELPRYLRLQVET 547 Query: 541 --SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 Y Y +QM + K+ K E R + DY + LSNE +KL+ +KP +L QAS+I Sbjct: 548 HIKYEGYIAKQMSQIKQFKKLENRKLDMIEDYKEVMGLSNEAVQKLNDIKPESLGQASRI 607 Query: 599 EGMTPAALNLLLIYIK 614 G++P+ +N+LLIY++ Sbjct: 608 SGVSPSDINVLLIYME 623 >gi|157415452|ref|YP_001482708.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Campylobacter jejuni subsp. jejuni 81116] gi|172047158|sp|A8FMP4|MNMG_CAMJ8 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|157386416|gb|ABV52731.1| glucose inhibited division protein A [Campylobacter jejuni subsp. jejuni 81116] Length = 619 Score = 486 bits (1250), Expect = e-135, Method: Compositional matrix adjust. Identities = 271/618 (43%), Positives = 370/618 (59%), Gaps = 15/618 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EA+A AA++G T L+T IG+ SCNPAIGGL KGHLV+E+DA+ Sbjct: 2 FDVIVIGGGHAGVEASAAAARMGKKTLLLTTLIEQIGAASCNPAIGGLAKGHLVKELDAM 61 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLMG + D AGIQFR+LN KG AV+G R Q D + YR+ + ++L NL++ Q + + Sbjct: 62 GGLMGEITDEAGIQFRILNESKGVAVQGSRAQIDMDKYRIIARNKLLKLPNLEISQEQAS 121 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + + V+LTTGTFL G+IH+G+ K+ AGR+G+ S +L N Sbjct: 122 VLIVENDEVKGVKTNLENTYFAKKVILTTGTFLNGLIHVGENKLQAGRVGELASVNLGNY 181 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 GRLKTGT R+D K+I + E Q D FSF + Q+ C I RT Sbjct: 182 LQTLGLKMGRLKTGTCPRVDAKSIDFSVLEIQDGDVNPKAFSFRSKNFNPTQLPCYIART 241 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N TH II N + +++G I+ GPRYCPSIEDKI RF ++ H +F+EP+ ++ Sbjct: 242 NTTTHEIIKNNFYRAPLFTGQIEGVGPRYCPSIEDKINRFSDKESHHLFIEPQTIDATEY 301 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG ST+LP E+Q Q +R++ G E I R GYAIEYDYI P EL TLE KKI L+ Sbjct: 302 YINGFSTSLPYEVQIQMLRSVKGFEDAKITRFGYAIEYDYIEPTELKHTLELKKIKNLYC 361 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAAAQG +AGIN++ + + + R ++YIGV+IDDL KG EPYR Sbjct: 362 AGQINGTTGYEEAAAQGFMAGINASLSIDMKEPLILRRDEAYIGVLIDDLVVKGTKEPYR 421 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL-VLT 484 MFTSRAE+R+ LR +NA RL G LG + E+ YIQ N +L K L L Sbjct: 422 MFTSRAEFRLLLREENAILRLGKYGYDLGLLSEQD----FTYIQ--NIANNLQKGLEFLL 475 Query: 485 SKNLSST--------SISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 SK + S+ + + ++ F I+ L + P + + + Sbjct: 476 SKEFTPNNQNNAFLESLGEDKISSIVNLQKIVARASFDIEKLKKLDPMFETMDNYSLREI 535 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 E+ Y Y Q + +++K + IP++FD+ S+ LSNE+ EKL+ KP + AS Sbjct: 536 LNEAKYYHYISMQKAQVEKMKNLSELKIPENFDFKSVSGLSNEVVEKLNHHKPPTIFAAS 595 Query: 597 KIEGMTPAALNLLLIYIK 614 +I G+TPAAL++L IYIK Sbjct: 596 QISGITPAALDILQIYIK 613 >gi|302393074|ref|YP_003828894.1| glucose inhibited division protein A [Acetohalobium arabaticum DSM 5501] gi|302205151|gb|ADL13829.1| glucose inhibited division protein A [Acetohalobium arabaticum DSM 5501] Length = 625 Score = 486 bits (1250), Expect = e-135, Method: Compositional matrix adjust. Identities = 259/615 (42%), Positives = 376/615 (61%), Gaps = 3/615 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIG GHAGCEAA AA++ T L+T I M CNP+IGG KGH+VREID Sbjct: 2 KEYDVIVIGAGHAGCEAALAAARMECKTLLLTLNVDHIALMPCNPSIGGPAKGHIVREID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D + I ++LN KGPAV R QAD+ +Y+L M + + Q++LD+ Q Sbjct: 62 ALGGQMAENIDKSYINIQLLNTSKGPAVHALRAQADKHIYQLEMTKTLQKQDDLDLKQSV 121 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + ++ + + +VLTTGT L G + IG +K GR G+ + L Sbjct: 122 VTELTADGQSVTGVKTITGMEYQADKIVLTTGTSLDGKVIIGDVKYVGGRQGEFAAVELS 181 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 +S + R +T TP R+ ++ + K Q E + FSF +I Q C +T Sbjct: 182 DSLKELGLTLERFQTATPPRVHRDSMNFSKMTAQPGSEEPLQFSFSKPRIEREQTPCWLT 241 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 T +T +II E I+ S + +G I+ GPRYCPSI+ KI+RF ++ HQ+F+EPEGLNT Sbjct: 242 YTTDDTKQIIKEKIEKSPLSTGIIEGEGPRYCPSIDRKIMRFPDKTSHQVFIEPEGLNTK 301 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y NG++TA+PEE Q +R++PGLE+ I+RP YA+EYDY+ P +L PTLETK+++GL Sbjct: 302 EMYVNGLTTAMPEEDQVDILRSVPGLEEAEIMRPAYAVEYDYLPPTQLRPTLETKEVNGL 361 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGT+GYEEAA QGL+AGIN+AR + I R+++YIGV+IDDL ++G EP Sbjct: 362 YTAGQINGTSGYEEAAGQGLMAGINAARDLQNKEPIILKRSEAYIGVLIDDLITEGTDEP 421 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRM TSRAEYR+ LR DNAD RLTP+G ++G + E R ++ + L+S+ + Sbjct: 422 YRMLTSRAEYRLVLRHDNADLRLTPVGYEIGLVEEEVYNRVKDKEEKLEEGQDYLESIQI 481 Query: 484 T-SKNLSSTSISFKQDG--KTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 +K + F+ G K + L P+ +L +F + E+++IE Sbjct: 482 NPTKEVRQKLKEFESGGLKKPVSLATLLKRPELEYDDLNLFDDQLPEFDEHIKEQIEIEV 541 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ + K+ + E++LIP+D DY L L E +EKL+ +KP +L QAS+I G Sbjct: 542 KYEGYIKRQKQQIKKFQQMEEKLIPEDIDYHQLDNLRTEAREKLAEIKPVSLGQASRISG 601 Query: 601 MTPAALNLLLIYIKK 615 ++PA +++L+IY+++ Sbjct: 602 VSPADISVLMIYLEE 616 >gi|41058553|gb|AAR99257.1| glucose-inhibited division protein A [Candidatus Blochmannia laevigatus] Length = 590 Score = 486 bits (1250), Expect = e-135, Method: Compositional matrix adjust. Identities = 274/585 (46%), Positives = 361/585 (61%), Gaps = 15/585 (2%) Query: 42 GSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRE 101 G MSCNPA+GG+GKGHLV+EIDA+ G M D +GIQFRVLN KG AVR R QAD+ Sbjct: 1 GQMSCNPAVGGVGKGHLVKEIDAMGGSMACAIDQSGIQFRVLNSSKGAAVRATRAQADKI 60 Query: 102 LYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSM-IRCSTVVLTTGTFLRG 160 LYR ++ + Q+ L VIQ V +N I +V M R ++VVLTTGTFL G Sbjct: 61 LYRQVIRNILEYQKFLLVIQASVEDLIVSRNKIVGVVTPKLGMKFRGTSVVLTTGTFLNG 120 Query: 161 VIHIGKLKIPAGRMGDSPSNSLFNSFMK-FDFDTGRLKTGTPARLDGKTIIWDKTEKQFA 219 IHIG GR GD+ S+SL + +K GRLKTGT R+ K I +D Q++ Sbjct: 121 KIHIGMNNFRGGRSGDAESSSLLSERLKELSLKVGRLKTGTSPRVHAKGINFDALRAQYS 180 Query: 220 DERLIPFSFM-TDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSI 278 D+ + FSF+ + K Q+ C IT TN +TH I+ N+ S +Y+G IK PRYCPSI Sbjct: 181 DDPVPVFSFIGSTKQHPTQVPCYITHTNNKTHEIVRSNLHQSPMYTGLIKGISPRYCPSI 240 Query: 279 EDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPG 338 EDKI RF +RN HQIFLEPEGL T VY NGIST+LP +Q Q I++I GLE IIRPG Sbjct: 241 EDKITRFSDRNAHQIFLEPEGLTTPEVYLNGISTSLPFCVQIQMIKSIQGLENAYIIRPG 300 Query: 339 YAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDC 398 YAIEYD+ +P++L TLE+K ISGLF +GQINGTTGYEEAAAQGL+AGIN+AR S + Sbjct: 301 YAIEYDFFDPRDLKLTLESKFISGLFFSGQINGTTGYEEAAAQGLLAGINAARFSQNKEG 360 Query: 399 ICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGE 458 R +Y+GV++DDL + G EPYRMFTSRAEYR+SLR DNAD RLT I +LG I E Sbjct: 361 WYPRRDQAYLGVLVDDLCTHGTEEPYRMFTSRAEYRLSLREDNADLRLTEIARQLGLIDE 420 Query: 459 RRQKRFAKYIQEYNFLRSLLKSL--------VLTSKNLSSTSISFKQDGKTRTAYEFLSY 510 R K F + R L++ + N + + +G ++Y Sbjct: 421 LRWKVFCCKKENIEKERQRLRNTYIFPYSADIAQLNNFLKAPLIHEANGXDLLRRXEINY 480 Query: 511 PDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDY 570 S + F R+ V E+++I+ Y Y Q E + + E L+P D D+ Sbjct: 481 XXLSQLSTFGSSVLDRQ----VFEQIEIQIKYEGYIRHQQEEIERHIYNENTLLPTDIDF 536 Query: 571 SSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 + + LS E+ +KL+ KP+++ QAS+I G+TPAA++ LL+++KK Sbjct: 537 NIVSGLSKEVIDKLNNYKPYSIGQASRISGITPAAISNLLVWLKK 581 >gi|284049396|ref|YP_003399735.1| glucose inhibited division protein A [Acidaminococcus fermentans DSM 20731] gi|283953617|gb|ADB48420.1| glucose inhibited division protein A [Acidaminococcus fermentans DSM 20731] Length = 626 Score = 486 bits (1250), Expect = e-135, Method: Compositional matrix adjust. Identities = 268/622 (43%), Positives = 377/622 (60%), Gaps = 20/622 (3%) Query: 12 GGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGR 71 G GHAGCEAA AA++G T L T I M CNP++GG KGHLVREIDAL G MG Sbjct: 13 GAGHAGCEAALAAARMGQKTLLATLSMDNIALMPCNPSVGGPAKGHLVREIDALGGQMGL 72 Query: 72 VADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEK 131 AD A IQ R+LN KG AV+ R QAD+ LY M+ + +Q+NLDV Q + + Sbjct: 73 AADEACIQMRMLNTGKGYAVQALRAQADKPLYHTIMKEVVENQDNLDVKQLMIDKLLVKN 132 Query: 132 NIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDF 191 + + + + V+L TGT+LRG I G++ +G +G + L S + Sbjct: 133 GQVQGVEAETGEVFEADAVILCTGTYLRGKILYGEVAYMSGPIGQRSAMKLTGSLQEAGL 192 Query: 192 DTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTNLETHR 251 R KTGTPAR+D +T+ + K E Q+ DER+ FSFM+ T Q+ C +T TN TH+ Sbjct: 193 QLMRFKTGTPARVDARTLDYTKMEPQYGDERVRNFSFMSTITTRNQVPCYLTYTNPRTHQ 252 Query: 252 IIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGIS 311 II +N+ S +++G I+ GPRYCPSIE KI+RF +++ HQ+FLEPEGL T+ VY G+S Sbjct: 253 IIRDNLDRSCMFNGMIEGVGPRYCPSIESKIIRFADKDRHQLFLEPEGLRTNEVYVQGMS 312 Query: 312 TALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQING 371 ++LP EIQ F++TIPGLE ++R GYAIEYD ++P +L LE K ISGLF AGQ NG Sbjct: 313 SSLPAEIQVAFMQTIPGLEHCKMMRAGYAIEYDCLDPLQLKANLEHKAISGLFSAGQANG 372 Query: 372 TTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRA 431 T+GYEEAAAQGL+AGIN+A K + R+D+YIGV+IDDL +KG EPYRM TSRA Sbjct: 373 TSGYEEAAAQGLMAGINAALKLQGKKPLILKRSDAYIGVLIDDLVTKGTTEPYRMMTSRA 432 Query: 432 EYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLS-S 490 EYR+ LR DNAD RLT G +G + + R+A + ++ + + L L+ NL+ S Sbjct: 433 EYRLLLRQDNADLRLTQKGRDVGLVTD---DRYAAFTRKRDVIERTL--FNLSKINLAPS 487 Query: 491 TSISFKQDGKTRTA-------YEFLSYPDFSIQNLFSICPDARKFSSLVI---ERLQIES 540 K G TA + L P+ + + L DA L + E++ ++ Sbjct: 488 EENQEKVTGMGSTALRSSINMLDLLRRPEVTYEKL----ADAFGLEKLPVDAAEQVDVQV 543 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y +Q E + E +L+P+D DY+ + LS+E EKL+ +P ++ QAS+I G Sbjct: 544 KYQGYIRKQKQEVERALKLEDKLLPEDMDYTKIQELSSEAMEKLTKQRPVSIGQASRISG 603 Query: 601 MTPAALNLLLIYIKKNTVKLNE 622 ++PA +++L+++++ K E Sbjct: 604 VSPADISVLMVWLETQRRKGEE 625 >gi|284926412|gb|ADC28764.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Campylobacter jejuni subsp. jejuni IA3902] Length = 619 Score = 486 bits (1250), Expect = e-135, Method: Compositional matrix adjust. Identities = 271/618 (43%), Positives = 369/618 (59%), Gaps = 15/618 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EA+A AA++G T L+T IG+ SCNPAIGGL KGHLV+E+DA+ Sbjct: 2 FDVIVIGGGHAGVEASAAAARMGKKTLLLTTLIEQIGAASCNPAIGGLAKGHLVKELDAM 61 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLMG + D AGIQFR+LN KG AV+G R Q D + YR+ + ++L NL++ Q + + Sbjct: 62 GGLMGEITDEAGIQFRILNESKGVAVQGSRAQIDMDKYRIITRNKLLKLSNLEISQEQAS 121 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + + V+LTTGTFL G+IH+G+ K+ AGR+G+ S +L N Sbjct: 122 VLIVENDEVKGVKTNLENTYFAKKVILTTGTFLNGLIHVGENKLQAGRVGELASVNLGNY 181 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 GRLKTGT R+D K+I + E Q D FSF + Q+ C I RT Sbjct: 182 LQTLGLKMGRLKTGTCPRVDAKSIDFSVLEIQDGDVNPKAFSFRSRNFNPTQLPCYIART 241 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N TH II N + +++G I+ GPRYCPSIEDKI RF ++ H +F+EP+ ++ Sbjct: 242 NTTTHEIIKNNFYRAPLFTGQIEGVGPRYCPSIEDKINRFSDKESHHLFIEPQTIDATEY 301 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG ST+LP E+Q Q +R++ G E I R GYAIEYDYI P EL TLE KKI L+ Sbjct: 302 YINGFSTSLPYEVQIQMLRSVKGFENAKITRFGYAIEYDYIEPTELKHTLELKKIKNLYC 361 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAAAQG +AGIN++ + + + R ++YIGV+IDDL KG EPYR Sbjct: 362 AGQINGTTGYEEAAAQGFMAGINASLSIDMKEPLILRRDEAYIGVLIDDLVVKGTKEPYR 421 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL-VLT 484 MFTSRAE+R+ LR +NA RL G LG + E+ YIQ N +L K L L Sbjct: 422 MFTSRAEFRLLLREENAILRLGKYGYGLGLLSEQD----FTYIQ--NIANNLQKGLEFLL 475 Query: 485 SKNLSST--------SISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 SK + S+ + + ++ F I+ L + P + + Sbjct: 476 SKEFTPNNQNNAFLESLGEDKISSIVNLQKIVARASFDIEKLKKLDPIFETMDHYSLREI 535 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 E+ Y Y Q + +++K + IP++FD+ S+ LSNE+ EKL+ KP + AS Sbjct: 536 LNEAKYYHYISMQKAQVEKMKNLSELKIPENFDFKSVSGLSNEVVEKLNHHKPPTIFAAS 595 Query: 597 KIEGMTPAALNLLLIYIK 614 +I G+TPAAL++L IYIK Sbjct: 596 QISGITPAALDILQIYIK 613 >gi|282858649|ref|ZP_06267807.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prevotella bivia JCVIHMP010] gi|282588567|gb|EFB93714.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prevotella bivia JCVIHMP010] Length = 631 Score = 486 bits (1250), Expect = e-135, Method: Compositional matrix adjust. Identities = 262/628 (41%), Positives = 374/628 (59%), Gaps = 19/628 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+VIGGGHAGCEAA AA +GA T L+T + I MSCNPA+GG+ KG +VREIDAL Sbjct: 5 YDVLVIGGGHAGCEAATAAANIGAKTCLLTMDMNKIAQMSCNPAVGGIAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ-ENLDVIQGEV 124 G MG V DA+ IQFR+LN KGPAV PR Q DR+L+ + RE L + ++LD+ Q + Sbjct: 65 GGHMGLVTDASAIQFRMLNRSKGPAVWSPRAQCDRQLF-INFWRETLDKTDHLDIFQDQA 123 Query: 125 AGFNTEKNIISSIVMQDNSMIR--------CSTVVLTTGTFLRGVIHIGKLKIPAGRMGD 176 EKN S+ Q +R TV++T GTFL G++HIGK ++ GR+ + Sbjct: 124 EELLVEKNDASAETEQRVIGVRTIWGIDVYARTVIITAGTFLNGLMHIGKKQVAGGRISE 183 Query: 177 SPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR 236 ++ S + R+KTGTP R+D +++ ++ TE+Q + FSF + + Sbjct: 184 PAVHNFSESITRLGITVARMKTGTPVRIDKRSVHFEDTEEQPGECDYHQFSFFGAQRSLP 243 Query: 237 QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLE 296 Q+ C TN E H + ++ S +++G I+S GPRYCPSIE K+V F ++ H +FLE Sbjct: 244 QLPCWTFNTNEEVHETLRNSLSESPLFNGQIQSTGPRYCPSIETKLVTFPDKQSHPLFLE 303 Query: 297 PEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLE 356 PEG+NT+ +Y NG S+++P ++Q + I IP L I RPGYAIEYDY +P +L P+LE Sbjct: 304 PEGVNTNEMYLNGFSSSMPWDVQLEAIHKIPALRDAKIYRPGYAIEYDYFDPTQLKPSLE 363 Query: 357 TKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 +K + GLF AGQ+NGTTGYEEA QG+VAGIN+AR +R +SYIGV+IDDLT Sbjct: 364 SKIVEGLFFAGQVNGTTGYEEAGGQGMVAGINAARLCTDNQPFIMNRDESYIGVLIDDLT 423 Query: 417 SKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRS 476 +KGV EPYRMFTSRAEYRI LR D+AD RLT LG R + + + N + + Sbjct: 424 TKGVDEPYRMFTSRAEYRILLRQDDADARLTEKAYALGVAKRDRYDWWLQKKENINRIET 483 Query: 477 LLKSLVLTSKNLSS--TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF------ 528 + + + ++ I T + + P+ SI NL + P ++ Sbjct: 484 FFNNTSVKPEQVNGLLEKIGSSTIKGTTKLIDLIGRPNVSINNLSEVLPQLKETIEASPN 543 Query: 529 -SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSIL 587 + E +I+ Y Y R+ I A+++ E I F+YS + LS E ++KL + Sbjct: 544 RKEEIAEATEIKMKYKGYIERERIFAEKMHRLENMKIKGHFNYSEIHDLSTECRQKLERI 603 Query: 588 KPFNLLQASKIEGMTPAALNLLLIYIKK 615 +P L QAS+I G++P +N+LL+ + + Sbjct: 604 QPETLAQASRIPGVSPNDINVLLVLMGR 631 >gi|124516565|gb|EAY58073.1| Glucose-inhibited division protein A [Leptospirillum rubarum] Length = 605 Score = 486 bits (1250), Expect = e-135, Method: Compositional matrix adjust. Identities = 263/615 (42%), Positives = 370/615 (60%), Gaps = 20/615 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DV++IGGGH+G EAAA ++++G T L+T IG MSCNP++GG+GKGH+V EI+A+ Sbjct: 4 WDVVIIGGGHSGIEAAAASSRMGLETLLVTLHLDLIGQMSCNPSVGGIGKGHIVSEIEAM 63 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M ++ADA+G+QF++LN +KG AV+ R Q DR YR + + NL QGEV Sbjct: 64 GGAMSKLADASGLQFKMLNTRKGYAVQALRVQCDRYRYRQQARFFLEKYPNLFFRQGEVV 123 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 G+ ++++S+++ D + I + VLTTGTFL G +H+G+ + GR G+ ++ L + Sbjct: 124 GWRLRGSLVTSVLLHDETEIFARSFVLTTGTFLSGKLHVGERLVEGGRGGEKNASHLSSR 183 Query: 186 FM-KFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK----ITNRQIEC 240 GRLKTGTP R+ GKTI + + + Q D + FS D Q C Sbjct: 184 LQGDLGLSVGRLKTGTPPRISGKTIDFSRMDIQPGDNPPVFFSHHPDNGRLFFDGPQYPC 243 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +T TN +T II EN+ S +YSG IK GPRYCPSIEDKIV+F ER H +F+EPEG Sbjct: 244 YLTSTNNQTADIIRENLSRSPLYSGKIKGIGPRYCPSIEDKIVKFPERESHHVFIEPEGA 303 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + D YPNGIST+LP ++Q + + +IPGLE I RPGYA+EYD++ P +L +L+ + Sbjct: 304 DVDEFYPNGISTSLPVDVQERIVHSIPGLENAQITRPGYAVEYDFVFPDQLDLSLKVSHL 363 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 +FLAGQINGTTGYEEAA QGLVAGIN+ + RT SYIGVMIDDL S+GV Sbjct: 364 ENVFLAGQINGTTGYEEAAGQGLVAGINAGLLAKGNAPWIPDRTFSYIGVMIDDLVSQGV 423 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAE R+ +R NAD+R+TP+G LG + + + + F K + ++ L+ +L++ Sbjct: 424 DEPYRMFTSRAENRLFIRHHNADDRMTPLGKSLGVVPDSQWRIFEKKRESFSQLKKILQT 483 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 KN T KQ +PD SI +++ P +F + E E Sbjct: 484 HRAEGKNFLQT---LKQ-----PEVHLDDFPDPSISGIYATWP---RFWQIGFES---EI 529 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y + +++K EE IP+ F S P +S E+ +L P +A I G Sbjct: 530 KYEGYIRISEKKTQDLK-EEDYPIPEGFWNSPPPGISREIFTRLVKASPRTFREAMHIRG 588 Query: 601 MTPAALNLLLIYIKK 615 MTP AL L +++ Sbjct: 589 MTPGALESLRTKLRQ 603 >gi|86150404|ref|ZP_01068630.1| glucose inhibited division protein A [Campylobacter jejuni subsp. jejuni CF93-6] gi|85839229|gb|EAQ56492.1| glucose inhibited division protein A [Campylobacter jejuni subsp. jejuni CF93-6] Length = 619 Score = 486 bits (1250), Expect = e-135, Method: Compositional matrix adjust. Identities = 270/618 (43%), Positives = 370/618 (59%), Gaps = 15/618 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EA+A AA++G T L+T IG+ SCNPAIGGL KGHLV+E+DA+ Sbjct: 2 FDVIVIGGGHAGVEASAAAARMGKKTLLLTTLIEQIGAASCNPAIGGLAKGHLVKELDAM 61 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLMG + D AGIQFR+LN KG AV+G R Q D + YR+ + ++L NL++ Q + + Sbjct: 62 GGLMGEITDEAGIQFRILNESKGVAVQGSRAQIDMDKYRIIARNKLLKLPNLEISQEQAS 121 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + ++ V+LTTGTFL G+IH+G+ K+ AGR+G+ S +L N Sbjct: 122 VLIVENDEVKGVKTNLENIYFAKKVILTTGTFLNGLIHVGENKLQAGRVGELASVNLGNY 181 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 GRLKTGT R+D K+I + E Q D FSF + Q+ C I RT Sbjct: 182 LQTLGLKMGRLKTGTCPRVDAKSIDFSVLEIQDGDVNPKAFSFRSRNFNPTQLPCYIART 241 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N TH II N + +++G I+ GPRYCPSIEDK+ RF ++ H +F+EP+ ++ Sbjct: 242 NTTTHEIIKNNFYRAPLFTGQIEGVGPRYCPSIEDKVNRFSDKESHHLFIEPQTIDATEY 301 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG ST+LP E+Q Q +R++ G E I R GYAIEYDYI P EL TLE KKI L+ Sbjct: 302 YINGFSTSLPYEVQTQMLRSVKGFENAKITRFGYAIEYDYIEPTELKHTLELKKIKNLYC 361 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAAAQG +AGIN++ + + + R ++YIGV+IDDL KG EPYR Sbjct: 362 AGQINGTTGYEEAAAQGFMAGINASLSIDMKEPLILRRDEAYIGVLIDDLVVKGTKEPYR 421 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL-VLT 484 MFTSRAE+R+ LR +NA RL G LG + E+ YIQ N +L K L L Sbjct: 422 MFTSRAEFRLLLREENAILRLGKYGYDLGLLSEQD----FTYIQ--NIANNLQKGLEFLL 475 Query: 485 SKNLSST--------SISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 SK + S+ + + ++ F I+ L + P + + Sbjct: 476 SKEFTPNNQNNAFLESLGEDKISSIVNLQKIVARASFDIEKLKKLDPIFETMDHYSLREI 535 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 E+ Y Y Q + +++K + IP++FD+ S+ LSNE+ EKL+ KP + AS Sbjct: 536 LNEAKYYHYISMQKAQVEKMKNLSELKIPENFDFKSVSGLSNEVVEKLNHHKPPTIFAAS 595 Query: 597 KIEGMTPAALNLLLIYIK 614 +I G+TPAAL++L IYIK Sbjct: 596 QISGITPAALDILQIYIK 613 >gi|153951262|ref|YP_001397717.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Campylobacter jejuni subsp. doylei 269.97] gi|166222921|sp|A7H2I7|MNMG_CAMJD RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|152938708|gb|ABS43449.1| glucose inhibited division protein A [Campylobacter jejuni subsp. doylei 269.97] Length = 619 Score = 485 bits (1249), Expect = e-135, Method: Compositional matrix adjust. Identities = 270/616 (43%), Positives = 373/616 (60%), Gaps = 11/616 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EA+A AA++G T L+T IG+ SCNPAIGGL KGHLV+E+DA+ Sbjct: 2 FDVIVIGGGHAGVEASAAAARMGKKTLLLTTLIEQIGAASCNPAIGGLAKGHLVKELDAM 61 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG + D AGIQFR+LN KG AV+G R Q D + YR+ + ++L NL++ Q +V+ Sbjct: 62 GGFMGEITDEAGIQFRILNESKGVAVQGSRVQIDMDKYRIIARNKLLKLPNLEISQEQVS 121 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + ++ V+LTTGTFL G+IH+G+ K+ AGR+G+ S +L N Sbjct: 122 ALIVENDKVKGVKTNLENIYFAKKVILTTGTFLNGLIHVGENKLQAGRVGELASVNLGNY 181 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 GRLKTGT R+D +I + E Q D FSF + Q+ C I RT Sbjct: 182 LQTLGLKMGRLKTGTCPRVDATSIDFSVLEIQDGDVNPKAFSFRSRNFNPTQLPCYIART 241 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N TH II N + +++G I+ GPRYCPSIEDKI RF ++ H +F+EP+ ++ Sbjct: 242 NTTTHEIIKNNFYRAPLFTGQIEGVGPRYCPSIEDKINRFSDKESHHLFIEPQTIDATEY 301 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG ST+LP E+Q Q + ++ G E I R GYAIEYDYI P EL TLE KKI L+ Sbjct: 302 YINGFSTSLPYEVQTQMLHSVKGFENAKITRFGYAIEYDYIEPTELKHTLELKKIKNLYC 361 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAA QG +AGIN++ + + + R ++YIGV+IDDL KG EPYR Sbjct: 362 AGQINGTTGYEEAAVQGFMAGINASLSIDMKEPLILRRDEAYIGVLIDDLVVKGTKEPYR 421 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEY-NFLRSLLKSLV-- 482 MFTSRAE+R+ LR +NA RL G LG + E+ FA YIQ N L+ L+ L+ Sbjct: 422 MFTSRAEFRLLLREENAILRLGKYGYVLGLLSEQ---DFA-YIQNIANNLQKGLEFLLSK 477 Query: 483 -LTSKNLSSTSISFKQDGKTRTAYEF---LSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 T N ++ + + K + F ++ F I+ L + P + + + Sbjct: 478 EFTPNNQNNAFLESLGEDKISSIVNFQKIVARASFDIEKLKKLDPMFETMDNYSLREILN 537 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E+ Y Y Q + +++K + IP++FD+ S+ LSNE+ EKL+ KP + AS+I Sbjct: 538 EAKYCHYISMQKAQVEKMKNLSELKIPENFDFKSVSGLSNEVVEKLNHHKPPTIFAASQI 597 Query: 599 EGMTPAALNLLLIYIK 614 G+TPAAL++L IYIK Sbjct: 598 SGITPAALDILQIYIK 613 >gi|242310097|ref|ZP_04809252.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Helicobacter pullorum MIT 98-5489] gi|239523394|gb|EEQ63260.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Helicobacter pullorum MIT 98-5489] Length = 637 Score = 485 bits (1249), Expect = e-135, Method: Compositional matrix adjust. Identities = 278/634 (43%), Positives = 373/634 (58%), Gaps = 19/634 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAG EA+ V+AK+G T L+T IG+ SCNPA+GGLGKGHLV+E+DAL Sbjct: 3 YDVIVIGGGHAGIEASIVSAKMGCKTLLLTILVEQIGAASCNPAVGGLGKGHLVKEVDAL 62 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ-ENLDVIQGEV 124 G+MG + D GIQFR LN KGPAVRG R Q D + Y++ + REI Q +NL++ Q V Sbjct: 63 GGVMGYITDKCGIQFRTLNASKGPAVRGTRAQIDMDRYKI-IAREICYQTQNLEISQQIV 121 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + R V+LTTGTFLRG IHIG+ GR G+ P+ L + Sbjct: 122 ESLIVENQSVVGVKTSIGKEYRAKKVILTTGTFLRGKIHIGENISNNGRAGEPPAMELGD 181 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK------ITNRQI 238 + + GRLKTGT AR+ +I + EK + D FS T K + Q+ Sbjct: 182 CLREMGLEVGRLKTGTCARIKASSINFAILEKHYGDIPTPYFSKQTQKELGNQEFSPTQL 241 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C +T TN +TH II N + ++ G I+ GPRYCPSIEDK+ RF ++ HQ+FLEP+ Sbjct: 242 PCYVTYTNAKTHEIIRNNFHRAPMFIGQIEGIGPRYCPSIEDKVNRFSDKERHQLFLEPQ 301 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 L + Y NG++T+LP +IQ + I +I GLE I+R GYAIEYDY+NP EL TLETK Sbjct: 302 TLEANEYYINGLTTSLPFDIQEEMIHSIEGLENAEIVRYGYAIEYDYVNPTELKHTLETK 361 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 K L+ AGQINGTTGYEEAAAQG+ AGIN++ + I R ++YIGVMIDDL +K Sbjct: 362 KYKNLYCAGQINGTTGYEEAAAQGIFAGINASLSVQGREEIILKRNEAYIGVMIDDLVTK 421 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYRMF+SRAEYR+ LR NA RL + LG + E + + + L Sbjct: 422 GTKEPYRMFSSRAEYRLLLREGNAIFRLGELAYNLGLMQEDEYQELLRDKKAIMEGIEWL 481 Query: 479 KSLVLTSKN--LSSTSISFKQDGKTRTAYEFL-SYPDFSIQNLFSICP----DARKFSSL 531 S +T N L+ + ++ +T + + S F I L IC S Sbjct: 482 NSTTITPTNEILAFLDLIGEEKISDKTTWRTIASRRSFDIHKLLKICEIIPTPFVGLSER 541 Query: 532 VIERLQIESSYAAYTGRQ--MIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 +E + IE+ YA Y +Q +I+ + K IP+DF + +P LS E+ EKL P Sbjct: 542 ALEEILIEAKYANYIEKQQNLIDNMDKMLSIK--IPQDFSFDGIPGLSLEVIEKLKKFTP 599 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKKNTVKLNEI 623 +L +AS+I G+TPA+L +L +YI K N++ Sbjct: 600 KSLFEASEISGVTPASLEVLQLYIHLYHQKQNKL 633 >gi|332291817|ref|YP_004430426.1| glucose inhibited division protein A [Krokinobacter diaphorus 4H-3-7-5] gi|332169903|gb|AEE19158.1| glucose inhibited division protein A [Krokinobacter diaphorus 4H-3-7-5] Length = 625 Score = 485 bits (1249), Expect = e-135, Method: Compositional matrix adjust. Identities = 269/628 (42%), Positives = 388/628 (61%), Gaps = 18/628 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + +YDVIV+G GHAGCEAAA AA +G+ST LIT TI MSCNPA+GG+ KG +VR Sbjct: 3 LFQDTYDVIVVGAGHAGCEAAAAAANMGSSTLLITMNLQTIAQMSCNPAMGGIAKGQIVR 62 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G G V+D IQF++LN KGPA+ PR Q+DR + + ++ +NLD Sbjct: 63 EIDALGGYSGIVSDKTAIQFKMLNKSKGPAMWSPRVQSDRMRFAEEWRMKLEGTKNLDFY 122 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V+G E + + + +R +VVLT GTFL G+IHIG + GR G+ + Sbjct: 123 QEMVSGLIVENDKVVGVKTSLGIEVRGRSVVLTNGTFLNGLIHIGDKQFGGGRAGERAAT 182 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN---RQ 237 + F F++GR+KTGTP R+DG+++ + K Q DE +P F K T+ Q Sbjct: 183 GITEQLAGFGFESGRMKTGTPPRVDGRSLDFSKMIIQPGDE--VPEKFSYSKETSPLTHQ 240 Query: 238 IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 C ++ T+LE H I+ E S +++G IKS GPRYCPSIEDKI RF +++ HQ+F+EP Sbjct: 241 RPCHMSYTSLEVHDILREGFDRSPMFNGRIKSLGPRYCPSIEDKINRFADKDRHQLFIEP 300 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EG NT +Y NG ST+LPE++Q + ++++ G E V RPGYAIEYDY P +L TLET Sbjct: 301 EGWNTCEIYVNGFSTSLPEDVQFKALKSVAGFENVKFFRPGYAIEYDYFPPTQLKHTLET 360 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 K +SGL+ AGQINGTTGYEEAA+QGL+AG+N+ K ++ D R ++YIGV+IDDL + Sbjct: 361 KLVSGLYFAGQINGTTGYEEAASQGLMAGMNAHLKVHEKDPFMLKRDEAYIGVLIDDLIT 420 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL 477 KG EPYRMFTSRAEYR LR DNAD RLTP+ +G E R K E N L + Sbjct: 421 KGTEEPYRMFTSRAEYRTLLRQDNADERLTPMSNAVGLASEERLITMEKKQAESNDLVNF 480 Query: 478 LKSLVLTSKNLSST-----SISFKQDGKTRTAYEFLSYPDFSIQNL-----FSICPDARK 527 + + + ++ S +Q K ++ S P ++ ++ + + + Sbjct: 481 FEETSILPEEVNDILEERGSSPMRQSDKM---FKVFSRPQITLDDMKGFEKVAAYIEEKD 537 Query: 528 FSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSIL 587 V+E+ +I+ YA Y ++ A +++ E IP+ FDY+ L +LS E +EKLS + Sbjct: 538 LDRDVLEQAEIKVKYAGYIAKEKANADKLQRLENIKIPEGFDYTKLKSLSFEAREKLSKI 597 Query: 588 KPFNLLQASKIEGMTPAALNLLLIYIKK 615 +P + QAS++ G++P+ ++++L+Y+ + Sbjct: 598 RPTTISQASRVSGVSPSDISVMLVYMGR 625 >gi|123967098|ref|YP_001012179.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prochlorococcus marinus str. MIT 9515] gi|166222718|sp|A2BZ61|MNMG_PROM5 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|123201464|gb|ABM73072.1| Glucose inhibited division protein A [Prochlorococcus marinus str. MIT 9515] Length = 654 Score = 485 bits (1249), Expect = e-135, Method: Compositional matrix adjust. Identities = 279/631 (44%), Positives = 369/631 (58%), Gaps = 24/631 (3%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 N S+DVIVIGGGHAGCEAA AKLG STAL T I CNPA+GG K LV E+ Sbjct: 8 NESFDVIVIGGGHAGCEAAITTAKLGFSTALFTINLDRIAWQPCNPAVGGPAKSQLVHEV 67 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G++G++AD IQ R+LN +GPAV R Q D+ Y M + + +NL + + Sbjct: 68 DALGGIIGKLADETAIQKRILNASRGPAVWALRAQTDKREYSKRMIEILQNTDNLSLKEA 127 Query: 123 --------EVAGFN-TEKNIISSIVMQDNSMIRC---STVVLTTGTFLRGVIHIGKLKIP 170 EV F KN I C ++++T GTFL G I IG + Sbjct: 128 MITELLIKEVETFTKNSKNTTKQIKGVKTFFGTCYSAKSIIITAGTFLEGRIWIGNKSMS 187 Query: 171 AGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT 230 AGR G+ + L S T RLKTGTPAR+D K+I +D + Q + FSF Sbjct: 188 AGRSGEQAAQGLTESLHSLGIKTERLKTGTPARVDKKSISFDALDIQPSTASDKYFSF-D 246 Query: 231 DKITNR--QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGER 288 KI N QI C ITRT +TH +I N+ + IY G I S GPRYCPSIEDKIV+F ++ Sbjct: 247 PKIKNDMPQICCHITRTTQKTHELIRNNLHLTPIYGGFIDSKGPRYCPSIEDKIVKFADK 306 Query: 289 NGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINP 348 N HQIFLEPEG+NT +Y G ST LPE IQ + +RT+PGL K ++RP YA+EY+YI Sbjct: 307 NSHQIFLEPEGINTPEIYVQGFSTGLPENIQLELLRTLPGLNKCKMLRPAYAVEYEYIPA 366 Query: 349 KELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYI 408 +L +LET +I LF AGQINGTTGYEEAAAQGLVAGIN+ RK N D I FSR SYI Sbjct: 367 TQLKLSLETIEIDNLFSAGQINGTTGYEEAAAQGLVAGINATRKLNMKDPIIFSRESSYI 426 Query: 409 GVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR---QKRFA 465 G MI+DL ++ + EPYR+ TSR+EYR++LR DNAD RLTP+G ++G I ERR K Sbjct: 427 GTMINDLITRDLKEPYRVLTSRSEYRLTLRGDNADRRLTPLGFEIGLIDERRWFAHKEKM 486 Query: 466 KYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTR---TAYEFLSYPDFSIQNLFSIC 522 K ++E N S L++ L + + +I + K + T + L P+ + Sbjct: 487 KLLKEEN---SRLENTRLKCTDEIARNIELESGSKIKGSTTLKDLLKRPNVHYSDFIKYD 543 Query: 523 PDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKE 582 + V+E ++I+ Y Y RQ +I + + +P + +Y + LS E +E Sbjct: 544 LANKSLPIAVMEGVEIDIKYEGYLKRQQNNIDQINRQSLKSLPIEINYDLIDTLSLEARE 603 Query: 583 KLSILKPFNLLQASKIEGMTPAALNLLLIYI 613 L+ +KP N ASKI G++ A L LL+++ Sbjct: 604 NLNKIKPTNFGDASKIPGVSKADLTALLVWL 634 >gi|320530989|ref|ZP_08032021.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Selenomonas artemidis F0399] gi|320136738|gb|EFW28688.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Selenomonas artemidis F0399] Length = 626 Score = 485 bits (1249), Expect = e-135, Method: Compositional matrix adjust. Identities = 262/615 (42%), Positives = 376/615 (61%), Gaps = 5/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IV+G GHAG EAA AA+LG T +T I M CNP++GG GK HLVREIDAL Sbjct: 7 YDIIVVGAGHAGVEAALAAARLGRRTLCVTLSLDNIAMMPCNPSVGGPGKSHLVREIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG AD A IQ R+LN KGPAV R QAD+ LY+ M+ + + +LDV Q V Sbjct: 67 GGEMGVAADRASIQRRLLNTGKGPAVHALRMQADKFLYQRIMKETLENTPHLDVRQLLVT 126 Query: 126 GFNTEKN----IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 +E+ ++ I + I V+L TGT+LRG I +G+ G G P+ Sbjct: 127 ELLSEETEDGRRVTGIRCETGEQITARAVILATGTYLRGRIILGETIYDGGPNGQRPAMQ 186 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L +S R KTGTPAR+D +T+ + +T+ Q +E PFSFMT+K+ Q+ C Sbjct: 187 LSDSLRALGLKIMRFKTGTPARVDARTVDFSRTQVQEGEENAPPFSFMTEKMPREQVRCW 246 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN TH +I N+ + + +G I+ GPRYCPS+E KI RF ++ HQ+FLEPEGL+ Sbjct: 247 LTYTNAATHEVIRVNLHRAPMANGVIEGIGPRYCPSVETKIARFPDKERHQLFLEPEGLH 306 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ +Y G+ST+LP ++Q +F+RTI GLE I+RPGYAIEYD +P L P+L K ++ Sbjct: 307 TNELYVQGMSTSLPTDVQEEFLRTIAGLEHARIMRPGYAIEYDCFDPLGLEPSLAVKGVA 366 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GL+ GQ NGT+GYEEAAAQGL+AGIN+AR++ + + R+D YIGV+IDDL +KG Sbjct: 367 GLYSCGQANGTSGYEEAAAQGLIAGINAAREAAGEEPLILGRSDGYIGVLIDDLVTKGTE 426 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRM TSRAEYR+ LR DNAD RLTP+G ++G + + R +F LL++ Sbjct: 427 EPYRMMTSRAEYRLILRQDNADLRLTPVGREIGLVSDARWAKFTAKRDAIEAALHLLETT 486 Query: 482 VLTSKNLSSTSISFKQDGKTRTAYEFLS-YPDFSIQNLFSICPDARKFSSLVIERLQIES 540 LT + ++ RT + ++ S D + V E ++I Sbjct: 487 KLTPDAATEGRLADAGLLPLRTPMNLAALLRREGSYDVLSALFDLPILADDVKEEVEITV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y +Q + ++ E+R IP++ DY+++ +L E +EKL+ ++P ++ QAS+I G Sbjct: 547 RYDGYIRKQREQIARMERLERRRIPEEIDYAAITSLRLEAQEKLAAVRPHSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKK 615 ++PA +++LL+Y++K Sbjct: 607 VSPADVSMLLVYLEK 621 >gi|293380886|ref|ZP_06626922.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus crispatus 214-1] gi|290922559|gb|EFD99525.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus crispatus 214-1] Length = 634 Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust. Identities = 264/617 (42%), Positives = 364/617 (58%), Gaps = 11/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAA +A +G T L+T + M CNP++GG KG +VREIDAL Sbjct: 12 YDVIVVGAGHAGCEAALASAHMGQKTLLVTIGLDMVAFMPCNPSVGGPAKGTVVREIDAL 71 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ DA IQ R+LN KGPAVR R QAD+ Y M+ I + NL + Q V Sbjct: 72 GGQMGKNIDATYIQMRMLNTGKGPAVRALRAQADKWQYHEHMKDTIENTPNLTLRQAIVD 131 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + ++ + +VVLTTGT RG I IG+L +G +PS L + Sbjct: 132 ELVVEDGVCKGVITNTGAKYHAKSVVLTTGTAARGKIIIGELTYSSGPNNTTPSIKLSEN 191 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 K F R KTGTP R++G TI + KTE++ D+ FS+ + + +QI C +T Sbjct: 192 LEKLGFKLRRFKTGTPPRVNGNTIDYSKTEEEPGDKTPRHFSYESRDEDYLQKQISCWMT 251 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II N+ + ++SG IK GPRYCPSIEDK+VRF +++ HQIFLEPEG T Sbjct: 252 YTNPTTHTIIRNNLDRAPMFSGIIKGVGPRYCPSIEDKVVRFADKDHHQIFLEPEGKTTK 311 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY ST++PEEIQ + I ++ GLE ++RPGYAIEYD + P +L TLETK + L Sbjct: 312 EVYVGDFSTSMPEEIQLKMIHSVAGLEHAEMMRPGYAIEYDVVEPWQLKHTLETKNVKHL 371 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ+NGT+GYEEAA QGL+AGIN+A + R D+YIGV+IDDL +KG EP Sbjct: 372 FTAGQMNGTSGYEEAAGQGLIAGINAALSAQDKPGFTLGRNDAYIGVLIDDLVTKGTNEP 431 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT G LG I + +RFA++ ++ + + L Sbjct: 432 YRLLTSRAEYRLILRNDNADLRLTEYGHDLGLISD---ERFARFEEKKHAIEDAKTRLHE 488 Query: 484 TSKNLSSTSISFKQD-GKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 + +L+ F Q G+ A FL P+ +I ++ + + V E+++ Sbjct: 489 ITVHLTDEVQEFLQSIGQEPMKAGVKADVFLRRPNVTIADIERLTGEKVPGDRYVKEQVE 548 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I YA Y ++ +K +E + IP D DY+ + L+ E ++K ++P L QA + Sbjct: 549 IGIKYAGYIKKEETRIARLKRQEAKKIPADIDYNQIEGLATEARQKFEKIRPETLAQAER 608 Query: 598 IEGMTPAALNLLLIYIK 614 I G+ PA L +L +YI+ Sbjct: 609 ISGVNPADLAILSVYIQ 625 >gi|323467507|gb|ADX71194.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Lactobacillus helveticus H10] Length = 661 Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust. Identities = 264/614 (42%), Positives = 360/614 (58%), Gaps = 5/614 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAA +A +G T L+T + M CNP++GG KG +VREIDAL Sbjct: 10 YDVIVVGAGHAGCEAALASAHMGQKTLLVTIGLDMVAFMPCNPSVGGPAKGTVVREIDAL 69 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ DA IQ R+LN KGPAVR R QAD+ Y M+ I + NL + Q V Sbjct: 70 GGQMGKNIDATYIQMRMLNTGKGPAVRALRAQADKWQYHEHMKDTIENTPNLTLRQAIVD 129 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + ++ + +VVLTTGT RG I IG+L +G +PS L + Sbjct: 130 QLVVEDGVCKGVITNTGAKYHAKSVVLTTGTAARGKIIIGELTYSSGPNNTTPSIKLSEN 189 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--NRQIECGIT 243 K F R KTGTP R++G TI + KTE++ D+ FS+ + + QI C +T Sbjct: 190 LEKLGFKLRRFKTGTPPRVNGNTIDYSKTEEEPGDKTPRHFSYESKDVDYLKNQISCWMT 249 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II EN+ + ++SG IK GPRYCPSIEDK+VRF +++ HQIFLEPEG T Sbjct: 250 YTNNGTHEIIRENLNRAPMFSGIIKGVGPRYCPSIEDKVVRFADKDRHQIFLEPEGRTTR 309 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY ST++PEEIQ + + ++ GLE ++RPGYAIEYD + P +L TLETK I L Sbjct: 310 EVYVGDFSTSMPEEIQLKMVHSVAGLEHAEMMRPGYAIEYDVVEPWQLKHTLETKNIKHL 369 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ+NGT+GYEEAA QGL+AGIN+A + R D+YIGV+IDDL +KG EP Sbjct: 370 FTAGQMNGTSGYEEAAGQGLIAGINAALSAQDKPGFTLGRNDAYIGVLIDDLVTKGTNEP 429 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL-V 482 YR+ TSRAEYR+ LR DNAD RLT G +LG I + R ++F + Q + L + V Sbjct: 430 YRLLTSRAEYRLILRHDNADLRLTEYGHELGLISDERYEKFEEKKQAIRDAKERLHEITV 489 Query: 483 LTSKNLSSTSISFKQDGKTR--TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + ++ S Q+ A FL P+ I ++ + + V E+++I Sbjct: 490 HLNDDVQEFLKSIGQEPMKAGVKADVFLRRPNVKIADIERLTGEKIPGDRYVKEQVEIGI 549 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 YA Y ++ +K +E + IP D DY + L+ E ++K ++P L QA +I G Sbjct: 550 KYAGYIKKEETRIARLKRQEAKKIPADIDYEMIEGLATEARQKFEKIRPETLAQAERISG 609 Query: 601 MTPAALNLLLIYIK 614 + PA L +L +YI+ Sbjct: 610 VNPADLAILSVYIQ 623 >gi|41058573|gb|AAR99270.1| glucose-inhibited division protein A [Candidatus Blochmannia pennsylvanicus] Length = 594 Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust. Identities = 279/587 (47%), Positives = 366/587 (62%), Gaps = 15/587 (2%) Query: 40 TIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQAD 99 T+G MSCNPA+GG+GKGHLV+EIDA+ G M D +GIQFRVLN KG AVR R QAD Sbjct: 3 TLGQMSCNPAVGGIGKGHLVKEIDAMGGSMAYAIDQSGIQFRVLNSSKGAAVRATRAQAD 62 Query: 100 RELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSM-IRCSTVVLTTGTFL 158 + LYR A++ + Q+ L VIQ V N I ++ M ++VVLTTGTFL Sbjct: 63 KILYRQAIRSILEYQKFLLVIQASVEDLIVSGNKIVGVITPKLGMKFSGTSVVLTTGTFL 122 Query: 159 RGVIHIGKLKIPAGRMGDSPSNSLFNSFMK-FDFDTGRLKTGTPARLDGKTIIWDKTEKQ 217 G IHIG GR GDS S+SL + +K F RLKTGT R+ K I + Q Sbjct: 123 NGKIHIGMNNFRGGRSGDSESSSLLSERLKELSFQISRLKTGTSPRVHTKGINFGSLRAQ 182 Query: 218 FADERLIPFSFM-TDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCP 276 ++D+ + FSF+ + K+ Q+ C IT TN +TH I+ N+ S +Y+G IK PRYCP Sbjct: 183 YSDDPIPVFSFIGSTKLHPTQVPCYITHTNNKTHEIVRSNLYQSPMYTGLIKGIAPRYCP 242 Query: 277 SIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIR 336 SIEDKI RF +RN HQIFLEPEGL T VY NGIST+LP +Q Q I++I GLE IIR Sbjct: 243 SIEDKITRFSDRNAHQIFLEPEGLTTPEVYLNGISTSLPFCVQMQMIKSIQGLENACIIR 302 Query: 337 PGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKL 396 PGYAIEYD+ +P++L TLE+K ISGLF +GQINGTTGYEEAAAQGL+AGIN+AR S Sbjct: 303 PGYAIEYDFFDPRDLKLTLESKIISGLFFSGQINGTTGYEEAAAQGLLAGINAARFSKNK 362 Query: 397 DCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCI 456 + R +Y+GV++DDL + G EPYRMFTSRAEYR+SLR DNAD RLT I +LG I Sbjct: 363 EGWYPRRDQAYLGVLVDDLCTHGTEEPYRMFTSRAEYRLSLREDNADLRLTEIARQLGLI 422 Query: 457 GERRQKRFAKYIQEYNFLRSLLK--------SLVLTSKNLSSTSISFKQDGKTRTAYEFL 508 E R K F + R L+ S V N T ++ + +G+ + Sbjct: 423 DESRWKAFCCKKENIEKERQRLRNTYIFPYSSDVAQLNNFLKTPLTHETNGEDLLRRPEI 482 Query: 509 SYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDF 568 +Y S + FS R+ V E+++I+ Y Y Q E K + E L+P D Sbjct: 483 NYKKLSQLSTFSPSILDRQ----VFEQIEIQIKYEGYIRHQQEEIKRHIYNENTLLPTDI 538 Query: 569 DYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 D++ + LS E+ +KL+ KP+++ QAS+I G+TPAA++ LL+++KK Sbjct: 539 DFNIVSGLSQEVIDKLNNYKPYSIGQASRISGITPAAISNLLVWLKK 585 >gi|86131106|ref|ZP_01049705.1| glucose inhibited division protein A [Dokdonia donghaensis MED134] gi|85818517|gb|EAQ39677.1| glucose inhibited division protein A [Dokdonia donghaensis MED134] Length = 625 Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust. Identities = 268/627 (42%), Positives = 387/627 (61%), Gaps = 16/627 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + +YDVIV+G GHAGCEAAA AA +G+ST L+T TI MSCNPA+GG+ KG +VR Sbjct: 3 LFQDTYDVIVVGAGHAGCEAAAAAANMGSSTLLVTMNLQTIAQMSCNPAMGGIAKGQIVR 62 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G G V+D IQF++LN KGPA+ PR Q+DR + + + NLD Sbjct: 63 EIDALGGYSGIVSDKTAIQFKMLNKSKGPAMWSPRVQSDRMRFAEEWRLRLEGTPNLDFY 122 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V+G E N + + +R +VVLT GTFL G+IHIG+ + GR G+ + Sbjct: 123 QEMVSGLLVENNKVVGVTTSLGIKVRGRSVVLTNGTFLNGLIHIGEKQFGGGRAGERAAT 182 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM--TDKITNRQI 238 + + F FD+GR+KTGTP R+DG+++ + K Q D+ FS+ T +TN Q Sbjct: 183 GITEQLLDFGFDSGRMKTGTPPRVDGRSLDFSKMIIQPGDDVPEKFSYSKETSPLTN-QR 241 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C ++ T+ E H ++ E S +++G IKS GPRYCPSIEDKI RF +++ HQ+F+EPE Sbjct: 242 PCHMSYTSPEVHDLLREGFDRSPMFNGRIKSLGPRYCPSIEDKINRFADKDRHQLFVEPE 301 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 G +T +Y NG ST+LPE++Q + +R++ G E V RPGYAIEYDY P +L TLETK Sbjct: 302 GWDTCEIYVNGFSTSLPEDVQFKALRSVAGFENVKFFRPGYAIEYDYFPPTQLKHTLETK 361 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 +SGL+ AGQINGTTGYEEAA+QGL+AG+N+ K + + R ++YIGV+IDDL +K Sbjct: 362 LVSGLYFAGQINGTTGYEEAASQGLIAGMNAHLKVHDQEPFTLQRDEAYIGVLIDDLITK 421 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYRMFTSRAEYR LR DNAD RLTP K+G E R K ++ + L Sbjct: 422 GTEEPYRMFTSRAEYRTLLRQDNADERLTPRSHKVGLASEERLVTMEKKREQSDNLVKFF 481 Query: 479 KSLVLTSKNLSST-----SISFKQDGKTRTAYEFLSYPDFSIQNL-----FSICPDARKF 528 + + + +++ S +Q K ++ S P ++++ + D Sbjct: 482 EDTSILPEEVNNILEERGSSPMRQSDKM---FKVFSRPQIHLEDMKQFKKVAAYIDEYSL 538 Query: 529 SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 V+E+ +I+ YA Y ++ A +++ E IP +FDYS L +LS E +EKLS ++ Sbjct: 539 ERDVLEQAEIKVKYAGYIAKEKANADKLQRLENIKIPDNFDYSKLKSLSFEAREKLSKIR 598 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIKK 615 P + QAS++ G++P+ ++++L+Y+ + Sbjct: 599 PTTISQASRVSGVSPSDISVMLVYMGR 625 >gi|307265443|ref|ZP_07546999.1| glucose inhibited division protein A [Thermoanaerobacter wiegelii Rt8.B1] gi|306919557|gb|EFN49775.1| glucose inhibited division protein A [Thermoanaerobacter wiegelii Rt8.B1] Length = 581 Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust. Identities = 255/564 (45%), Positives = 350/564 (62%), Gaps = 10/564 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+V+G GHAG EAA A+LG T +I M+CNP+IGG K LVREIDAL Sbjct: 8 YDVVVVGLGHAGSEAALACARLGLKTVGFAVNLDSIALMACNPSIGGPAKAQLVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D + +Q R LN KGPAVR R Q D++LY++ M+ + QENLD+ Q E+ Sbjct: 68 GGEMAINTDKSLLQIRTLNTSKGPAVRSLRAQVDKKLYQMNMKYTLERQENLDIKQAEIV 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E N ++ +V + ++ +C ++TTGTFL+G + IG + +G G P+N L + Sbjct: 128 DILVEDNKVTGVVTKLGAIYKCKACIITTGTFLKGRVIIGDVSFNSGPSGLFPANELSET 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + F R KTGTPAR+D ++I + K E Q DE + PFS+M DKI Q+ C +T T Sbjct: 188 LKRLGFKLMRFKTGTPARVDKRSIDFSKMEIQPGDEVITPFSYMHDKIEIEQLPCWLTYT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N TH IIM NI S ++SG+I G RYCPSIEDK+V+F + HQIF+EPEGLNT + Sbjct: 248 NKRTHEIIMANIDRSPLFSGEITGVGVRYCPSIEDKVVKFPHKERHQIFIEPEGLNTYEM 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+S++LPE++Q +F+RT+PGLE V ++RP YAIEYD I+P +L TLE+KKI GL+ Sbjct: 308 YVQGMSSSLPEDVQLEFLRTVPGLENVRVMRPAYAIEYDCIDPTQLKATLESKKIEGLYF 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ+NGT+GYEEAAAQGL+AGIN+A K + R+ +YIGV+IDDL +KG EPYR Sbjct: 368 AGQVNGTSGYEEAAAQGLMAGINAAMKLLNEPSVILDRSQAYIGVLIDDLVTKGTNEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF-AKYIQEYNFLRSLLKSLVLT 484 M TSRAEYR+ LR DNAD RLT +G K+G + E R ++F K IQ ++ L +V Sbjct: 428 MLTSRAEYRLLLRQDNADFRLTELGYKIGLVTEERYQKFLKKKIQLEKEMQRLPGVIVKP 487 Query: 485 SKNLSSTSISFKQDGKTRTA-----YEFLSYPDFSIQNLFSICPD-ARKFSSLVIERLQI 538 S+ +++ IS G T Y L P+ ++ + D V E++ I Sbjct: 488 SEEVNNFLIS---KGSTPLVTGIDLYTLLKRPEIDYKSTKFLDKDRPHDILDSVAEQIDI 544 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKR 562 Y Y +Q+ + + K E + Sbjct: 545 NIKYEGYIMKQLRQVEHFKALENK 568 >gi|148926192|ref|ZP_01809877.1| glucose inhibited division protein A like protein [Campylobacter jejuni subsp. jejuni CG8486] gi|145845363|gb|EDK22456.1| glucose inhibited division protein A like protein [Campylobacter jejuni subsp. jejuni CG8486] Length = 619 Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust. Identities = 270/618 (43%), Positives = 369/618 (59%), Gaps = 15/618 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EA+A AA++G T L+T IG+ SCNPAIGGL KGHLV+E+DA+ Sbjct: 2 FDVIVIGGGHAGVEASAAAARMGKKTLLLTTLIEQIGAASCNPAIGGLAKGHLVKELDAM 61 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLMG + D AGIQFR+LN KG AV+G R Q D + YR+ + ++L NL++ Q + + Sbjct: 62 GGLMGEITDEAGIQFRILNESKGVAVQGSRAQIDMDKYRIIARNKLLKLPNLEISQEQAS 121 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + ++ V+LTTGTFL G+IH+G+ K+ AGR+G+ S +L N Sbjct: 122 VLIVENDEVKGVKTNLENIYFAKKVILTTGTFLNGLIHVGENKLQAGRVGELASVNLGNY 181 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 GRLKTGT R+D K+I + E Q D FSF + Q+ C I RT Sbjct: 182 LQTLGLKMGRLKTGTCPRVDAKSIDFSVLEIQDGDVNPKAFSFRSRNFNPTQLPCYIART 241 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N TH II N + +++G I+ GPRYCPSIEDKI RF ++ H +F+EP+ ++ Sbjct: 242 NTTTHEIIKNNFYRAPLFTGQIEGVGPRYCPSIEDKINRFSDKESHHLFIEPQTIDATEY 301 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG ST+LP E+Q Q +R++ G E I R GYAIEYDYI P EL TLE KKI L+ Sbjct: 302 YINGFSTSLPYEVQTQMLRSVKGFENAKITRFGYAIEYDYIEPTELKHTLELKKIKNLYC 361 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAA QG +AGIN++ + + + R ++YIGV+IDDL KG EPYR Sbjct: 362 AGQINGTTGYEEAAVQGFMAGINASLSIDMKEPLILRRDEAYIGVLIDDLVVKGTKEPYR 421 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL-VLT 484 MFTSRAE+R+ LR +NA RL G LG + E+ YIQ N +L K L L Sbjct: 422 MFTSRAEFRLLLREENAILRLGKYGYDLGLLSEQD----FTYIQ--NIANNLQKGLEFLL 475 Query: 485 SKNLSST--------SISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 SK + S+ + + ++ F I+ L + P + + Sbjct: 476 SKEFTPNNQNNAFLESLGEDKISSIVNLQKIVARASFDIEKLKKLDPIFETMDHYSLREI 535 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 E+ Y Y Q + +++K + IP++FD+ S+ LSNE+ EKL+ KP + AS Sbjct: 536 LNEAKYYHYISMQKAQVEKMKNLSELKIPENFDFKSVSGLSNEVVEKLNHHKPPTIFAAS 595 Query: 597 KIEGMTPAALNLLLIYIK 614 +I G+TPAAL++L IYIK Sbjct: 596 QISGITPAALDILQIYIK 613 >gi|41058582|gb|AAR99276.1| glucose-inhibited division protein A [Candidatus Blochmannia novaeboracensis] Length = 593 Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust. Identities = 277/587 (47%), Positives = 366/587 (62%), Gaps = 15/587 (2%) Query: 40 TIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQAD 99 T+G MSCNPA+GG+GKGHLV+EIDA+ G M D +GIQFRVLN KG AVR R QAD Sbjct: 2 TLGQMSCNPAVGGIGKGHLVKEIDAMGGSMAYAIDQSGIQFRVLNSSKGAAVRATRAQAD 61 Query: 100 RELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSM-IRCSTVVLTTGTFL 158 + LYR A++ + Q+ L VIQ V +N I ++ M ++VVLTTGTFL Sbjct: 62 KILYRQAIRNILEYQKFLLVIQASVEDLIVSRNRIVGVITPKLGMKFSGTSVVLTTGTFL 121 Query: 159 RGVIHIGKLKIPAGRMGDSPSNSLFNSFMK-FDFDTGRLKTGTPARLDGKTIIWDKTEKQ 217 G IHIG GR GDS S+SL + +K RLKTGT R+ K I +D Q Sbjct: 122 NGKIHIGMNNFRGGRSGDSESSSLLSERLKELSLQVNRLKTGTSPRVHTKGINFDSLRAQ 181 Query: 218 FADERLIPFSFM-TDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCP 276 ++D+ + FSF+ + K+ Q+ C IT TN +TH II N+ S +Y+G IK PRYCP Sbjct: 182 YSDDPIPVFSFIGSTKLHPTQVPCYITHTNNKTHEIIRSNLHQSPMYTGVIKGIAPRYCP 241 Query: 277 SIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIR 336 SIEDKI RF +RN HQIFLEPEGL T VY NGIST+LP +Q + I++I GLE +I+R Sbjct: 242 SIEDKITRFSDRNAHQIFLEPEGLTTPEVYLNGISTSLPFCVQMKMIKSIQGLENADIVR 301 Query: 337 PGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKL 396 PGYAIEYD+ +P++L TLE+K ISGLF +GQINGTTGYEEAAAQGL+AGIN+AR S Sbjct: 302 PGYAIEYDFFDPRDLKLTLESKIISGLFFSGQINGTTGYEEAAAQGLLAGINAARFSQNK 361 Query: 397 DCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCI 456 + R +Y+GV++DDL + G EPYRMFTSRAEYR+SLR DNAD RLT I +LG I Sbjct: 362 EGWYPRRDQAYLGVLVDDLCTHGTEEPYRMFTSRAEYRLSLREDNADLRLTEIARQLGLI 421 Query: 457 GERRQKRFAKYIQEYNFLRSLLK--------SLVLTSKNLSSTSISFKQDGKTRTAYEFL 508 E R K F + R L+ S V N T + + +G+ + Sbjct: 422 DESRWKDFCCKKENIEKERQRLRNTYVFPYSSDVAQLNNFLKTPLIHEANGEDLLRRPEI 481 Query: 509 SYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDF 568 +Y S + F R+ V E+++I+ Y Y Q E K + E L+P D Sbjct: 482 NYTKLSQLSTFGPSVLDRQ----VFEQIEIQIKYEGYIRHQQEEIKRHIYNENTLLPTDI 537 Query: 569 DYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 D++ + LS E+ +KL+ KP+++ QAS+I G+TPAA++ LL+++KK Sbjct: 538 DFNIVSGLSKEVIDKLNNYKPYSIGQASRISGITPAAISNLLVWLKK 584 >gi|256843836|ref|ZP_05549323.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus crispatus 125-2-CHN] gi|256613741|gb|EEU18943.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus crispatus 125-2-CHN] Length = 632 Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust. Identities = 265/617 (42%), Positives = 363/617 (58%), Gaps = 11/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAA +A +G T L+T + M CNP++GG KG +VREIDAL Sbjct: 10 YDVIVVGAGHAGCEAALASAHMGQKTLLVTIGLDMVAFMPCNPSVGGPAKGTVVREIDAL 69 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ DA IQ R+LN KGPAVR R QAD+ Y M+ I + NL + Q V Sbjct: 70 GGQMGKNIDATYIQMRMLNTGKGPAVRALRAQADKWQYHEHMKDTIENTPNLTLRQAIVD 129 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + ++ + +VVLTTGT RG I IG+L +G +PS L + Sbjct: 130 ELVVEDGVCKGVITNTGAKYHAKSVVLTTGTAARGKIIIGELTYSSGPNNTTPSIKLSEN 189 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 K F R KTGTP R++G TI + KTE++ D+ FS+ + + +QI C +T Sbjct: 190 LEKLGFKLRRFKTGTPPRVNGNTIDYSKTEEEPGDKIPRHFSYESRDEDYLQKQISCWMT 249 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II N+ + ++SG IK GPRYCPSIEDK+VRF +++ HQIFLEPEG T Sbjct: 250 YTNPTTHTIIRNNLDRAPMFSGIIKGVGPRYCPSIEDKVVRFADKDRHQIFLEPEGKTTK 309 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY ST++PEEIQ + I ++ GLE ++RPGYAIEYD + P +L TLETK + L Sbjct: 310 EVYVGDFSTSMPEEIQLKMIHSVAGLEHAEMMRPGYAIEYDVVEPWQLKHTLETKNVKHL 369 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ+NGT+GYEEAA QGL+AGIN+A + R D+YIGV+IDDL +KG EP Sbjct: 370 FTAGQMNGTSGYEEAAGQGLIAGINAALSAQDKPGFTLGRNDAYIGVLIDDLVTKGTNEP 429 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT G LG I + +RFA++ ++ + + L Sbjct: 430 YRLLTSRAEYRLILRNDNADLRLTEYGHDLGLISD---ERFARFEEKKHAIEDAKTRLHE 486 Query: 484 TSKNLSSTSISFKQD-GKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 + +L+ F Q G+ A FL P+ +I ++ + + V E+++ Sbjct: 487 ITVHLTDEVQEFLQSIGQEPMKAGVKADVFLRRPNVTIADIERLTGEKVPGDRYVKEQVE 546 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I YA Y ++ +K +E + IP D DY + L+ E ++K ++P L QA + Sbjct: 547 IGIKYAGYIKKEETRIARLKRQEAKKIPADIDYDQIEGLATEARQKFEKIRPETLAQAER 606 Query: 598 IEGMTPAALNLLLIYIK 614 I G+ PA L +L +YIK Sbjct: 607 ISGVNPADLAILSVYIK 623 >gi|228469898|ref|ZP_04054837.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Porphyromonas uenonis 60-3] gi|228308533|gb|EEK17321.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Porphyromonas uenonis 60-3] Length = 625 Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust. Identities = 269/630 (42%), Positives = 378/630 (60%), Gaps = 29/630 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D+IVIG GHAGCEAA A++GAST LIT + + +SCNPA+GG+ KG +VREIDAL Sbjct: 5 FDIIVIGAGHAGCEAACATARMGASTLLITGDMNKVAQLSCNPAMGGIAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADR----ELYRLAMQREILSQENLDVIQ 121 G G+++DAA IQ+R+LN KGPA+ PR Q DR EL+R + R + LD+ Q Sbjct: 65 GGYTGQLSDAATIQWRMLNRSKGPAMWSPRAQLDRMRFMELWRGQLDR----TDGLDLWQ 120 Query: 122 GEVA----GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 V G K+++ V Q + V++T GTFL G++H G+ IP GR+ + Sbjct: 121 DFVVDIKFGAADGKHLV---VTQLGMTFTAAKVIVTAGTFLGGLMHFGRTMIPGGRISEP 177 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNR 236 S+ L + R+KTGTPAR+DG+++ W E+Q D+ FSF+ + R Sbjct: 178 ASHGLTECLVAAGHHADRMKTGTPARIDGRSVDWSLVEEQPGDDETGHFSFLPMQRKPLR 237 Query: 237 QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLE 296 Q C I TN H I+ ++ S +Y+G I+S GPRYCPSIE KIV F +R HQ+FLE Sbjct: 238 QRSCYILYTNEACHDILRASLSDSPLYNGQIQSIGPRYCPSIETKIVNFADRTRHQLFLE 297 Query: 297 PEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLE 356 PEG T+ Y NG S++LP + Q + ++TIP L V + RPGYAIEYD+ +P++L TLE Sbjct: 298 PEGEETNEYYLNGFSSSLPIDTQIRALQTIPALRHVQLYRPGYAIEYDFFDPRDLHHTLE 357 Query: 357 TKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 +K +SGL+LAGQ+NGTTGYEEAA QGL+AGIN+A K + R ++YIGV+IDDL Sbjct: 358 SKVVSGLYLAGQVNGTTGYEEAAGQGLLAGINAALALQKKAPLILRRDEAYIGVLIDDLV 417 Query: 417 SKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRS 476 +KGV EPYRMFTSRAEYRI LR DNAD RLTP +LG R R + Q L Sbjct: 418 TKGVDEPYRMFTSRAEYRILLRQDNADLRLTPYAERLGLATAERLSRLEQIKQRMAELEQ 477 Query: 477 LLKSLVLTSKNLSSTSISFKQD----GKTRTAYEFLSYPDFSIQNLFSICPD-ARKFSSL 531 L + + ++++ S ++ G T L P SI L + D A + +S+ Sbjct: 478 LCANYSVKPESVNGYLSSLGENPLDFGTKLTT--LLLRPHVSISGLIAHLNDFATQVASI 535 Query: 532 ------VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 V+ R + Y Y R+ A+++ E + FDY + AL E +EKLS Sbjct: 536 IGDDTEVLTRTETSIKYQGYIEREEQAAQKLHRLESLTLGDKFDYQQISALPIEAREKLS 595 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 ++P + QA++I G++P+ +N+LL+ + + Sbjct: 596 RIRPATIAQAARIPGISPSDINILLVLLGR 625 >gi|149199475|ref|ZP_01876510.1| glucose-inhibited division protein A [Lentisphaera araneosa HTCC2155] gi|149137410|gb|EDM25828.1| glucose-inhibited division protein A [Lentisphaera araneosa HTCC2155] Length = 609 Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust. Identities = 268/621 (43%), Positives = 378/621 (60%), Gaps = 31/621 (4%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIVIGGGHAG EA+ +A++GA T LIT IG MSCNPAIGG+ KGH+VREID Sbjct: 2 KNYDVIVIGGGHAGIEASLASARMGAETLLITQNLDHIGQMSCNPAIGGIAKGHVVREID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 A+ G MG+ DA+ +QFR+LN +GPAV PR Q D+ LY+ M++++ E L Q E Sbjct: 62 AMGGEMGQNTDASALQFRMLNASRGPAVWSPRAQCDKVLYQRRMKQQLEKTEKLHTHQAE 121 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 F TEK+ I ++ Q + VL GTF+RG++H G ++P GR GD+ ++++ Sbjct: 122 GLSFVTEKSKIIAVQTQFGDKFEAKSFVLCCGTFMRGLMHFGPQQLPGGRTGDTAADAIS 181 Query: 184 NSFMK-FDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--------DKIT 234 S + RLKTGTP R+ KTI ++K E+Q D FS+ D+ Sbjct: 182 ESLKNDLGLELMRLKTGTPPRVLAKTIDFEKLERQ--DGECGEFSYWPREKEYETIDRGG 239 Query: 235 NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 Q+ C I RT+ ET ++I +N+ S +Y+G I + G RYCPSIEDKI RFG+++ HQ+F Sbjct: 240 IPQMPCYIGRTSAETKQVIADNLHLSPMYNGSIDAIGTRYCPSIEDKIHRFGDKDSHQVF 299 Query: 295 LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT 354 LEPEG+ T+ Y NGIST+LP +IQ++ + +IPGLEK I R YA+EYD ++P + + Sbjct: 300 LEPEGVFTEEYYLNGISTSLPVQIQNKIVHSIPGLEKAEIARYAYAVEYDVVSPHQTQNS 359 Query: 355 LETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDD 414 L K LF+AGQINGT+GYEEAA QGL+AG N+A + R +YIGVMIDD Sbjct: 360 LALKSWPNLFVAGQINGTSGYEEAAGQGLIAGANAAGLVAGKPPLILERDQAYIGVMIDD 419 Query: 415 LTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFL 474 L +K + EPYR+FTSRAEYR+ LR DNAD RL+ I G + + K AK + Sbjct: 420 LVTKDISEPYRLFTSRAEYRLLLRQDNADRRLSKIAYDYGLLPYEKYK-IAKDKE----- 473 Query: 475 RSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIE 534 +L+ + KN + GK+ +E LS S +N + V E Sbjct: 474 -TLIDDEIERLKNE-------RHHGKS--LWEHLS----SHKNTYESVVGESDLPDDVKE 519 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 ++QI++ Y Y R+ + + K K IP+D DY ++ L NE K KLS +P +L Q Sbjct: 520 QVQIDARYECYIQREKQQVERQKRLAKNPIPEDLDYLNITGLGNEAKNKLSRYRPVDLGQ 579 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 A++I+G+TPA + L+ ++IK+ Sbjct: 580 AARIDGVTPAEIGLIQVHIKR 600 >gi|71894526|ref|YP_278634.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Mycoplasma synoviae 53] gi|123644047|sp|Q4A5P8|MNMG_MYCS5 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|71851314|gb|AAZ43923.1| glucose inhibited division protein A [Mycoplasma synoviae 53] Length = 609 Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust. Identities = 264/615 (42%), Positives = 379/615 (61%), Gaps = 15/615 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +N ++D IVIG GHAG EAA AK ALIT S I M CNP+IGG KG + RE Sbjct: 1 MNNNFDAIVIGAGHAGVEAAFALAKSNNKVALITFDLSKITMMPCNPSIGGPAKGIITRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G+ G +D A IQ ++LN KGPAVR R Q D+E Y ++ ++ N+ +I+ Sbjct: 61 IDALGGIQGYYSDLAMIQIKMLNDSKGPAVRAIRAQIDKEKYSKLIREDLQKNSNITLIE 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V +K + S+V+ I VLTTGT++ I G +G G +N Sbjct: 121 AGVYEIKADKKVFKSVVLSTGEEIFAKVCVLTTGTYMNSQILRGSSVTVSGPDGQKTTNK 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 + S K F+ R KTGTPAR+ +I + K EK+ D + FS ++K N+Q+ C Sbjct: 181 ISESLKKLGFELQRFKTGTPARIYKSSIDFSKVEKEILDTNDLNFSNRSNKKLNQQVSCY 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN +TH II+ N+ S++YSG IK GPRYCPSIEDK+VRF +RN HQ+F EPE L+ Sbjct: 241 LTYTNEKTHEIILNNLDKSSMYSGLIKGTGPRYCPSIEDKVVRFSDRNRHQVFFEPETLD 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 ++Y NG+ST++PE+IQ QF++TIPGLE + I + GYAIEYD +N +L +LETK I Sbjct: 301 ETIIYLNGLSTSMPEDIQMQFLKTIPGLENLKIQKYGYAIEYDALNSLDLKHSLETKVIK 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 F AGQINGT+GYEEAAAQGL+AGIN+A K + R+D+YIGV+IDDL KG Sbjct: 361 NFFAAGQINGTSGYEEAAAQGLIAGINAALKLKNKKPLVLKRSDAYIGVLIDDLVIKGTK 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRM TSRAEYR+ LR DN+D RL+ G KLG I + +++ ++Y + S + Sbjct: 421 EPYRMLTSRAEYRLLLRHDNSDYRLSKYGYKLGLIS---KDEYSQIQKKYKNINSKIN-- 475 Query: 482 VLTSKNLSSTS-ISFKQDGKTRTAY-EFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 L+ K LS+ S I+ K + K T+Y + L P+ + +++ K+ + ++ ++++E Sbjct: 476 YLSKKYLSTNSNIAKKYNIKEATSYLKLLLRPEINPKDILK----NYKYQNELLIKIKLE 531 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y +Q +A +K EK IP + +Y + L++E K+KL I+KP + QA +I Sbjct: 532 ----GYIKKQKQDASRMKNLEKIKIPNNINYDKVLNLASEAKDKLKIIKPETIAQAYRIS 587 Query: 600 GMTPAALNLLLIYIK 614 G+ P+ + +L+ ++K Sbjct: 588 GINPSDIQMLIFHLK 602 >gi|295693882|ref|YP_003602492.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmg [Lactobacillus crispatus ST1] gi|295031988|emb|CBL51467.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Lactobacillus crispatus ST1] Length = 634 Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust. Identities = 264/617 (42%), Positives = 363/617 (58%), Gaps = 11/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAA +A +G T L+T + M CNP++GG KG +VREIDAL Sbjct: 12 YDVIVVGAGHAGCEAALASAHMGQKTLLVTIGLDMVAFMPCNPSVGGPAKGTVVREIDAL 71 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ DA IQ R+LN KGPAVR R QAD+ Y M+ I + NL + Q V Sbjct: 72 GGQMGKNIDATYIQMRMLNTGKGPAVRALRAQADKWQYHEHMKDTIENTPNLTLRQAIVD 131 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + ++ + +VVLTTGT RG I IG+L +G +PS L + Sbjct: 132 ELVVEDGVCKGVITNTGAKYHAKSVVLTTGTAARGKIIIGELTYSSGPNNTTPSIKLSEN 191 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 K F R KTGTP R++G TI + KTE++ D+ FS+ + + +QI C +T Sbjct: 192 LEKLGFKLRRFKTGTPPRVNGNTIDYSKTEEEPGDKTPRHFSYESRDEDYLQKQISCWMT 251 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II N+ + ++SG IK GPRYCPSIEDK+VRF +++ HQIFLEPEG T Sbjct: 252 YTNPTTHTIIRNNLDRAPMFSGIIKGVGPRYCPSIEDKVVRFADKDRHQIFLEPEGKTTK 311 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY ST++PEEIQ + I ++ GLE ++RPGYAIEYD + P +L TLETK + L Sbjct: 312 EVYVGDFSTSMPEEIQLKMIHSVAGLEHAEMMRPGYAIEYDVVEPWQLKHTLETKNVKHL 371 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ+NGT+GYEEAA QGL+AGIN+A + R D+YIGV+IDDL +KG EP Sbjct: 372 FTAGQMNGTSGYEEAAGQGLIAGINAALSAQDKPGFTLGRNDAYIGVLIDDLVTKGTNEP 431 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT G LG I + +RFA++ ++ + + L Sbjct: 432 YRLLTSRAEYRLILRNDNADLRLTEYGHDLGLISD---ERFARFEEKKHAIEDAKTRLHE 488 Query: 484 TSKNLSSTSISFKQD-GKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 + +L+ F Q G+ A FL P+ +I ++ + + V E+++ Sbjct: 489 ITVHLTDEVQEFLQSIGQEPMKAGVKADVFLRRPNVTIADIERLTGEKVPGDRYVKEQVE 548 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I YA Y ++ +K +E + IP D DY + L+ E ++K ++P L QA + Sbjct: 549 IGIKYAGYIKKEETRIARLKRQEAKKIPADIDYDQIEGLATEARQKFEKIRPETLAQAER 608 Query: 598 IEGMTPAALNLLLIYIK 614 I G+ PA L +L +YI+ Sbjct: 609 ISGVNPADLAILSVYIQ 625 >gi|304437939|ref|ZP_07397885.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369079|gb|EFM22758.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 626 Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust. Identities = 266/622 (42%), Positives = 379/622 (60%), Gaps = 13/622 (2%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 N +YD+IVIG GHAG EAA AA++G T ++T I M CNP++GG GK HLVREI Sbjct: 4 NTNYDIIVIGAGHAGVEAALAAARMGRRTLILTLSLDNIAMMPCNPSVGGPGKSHLVREI 63 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G MG AD A IQ R+LN KGPAV R QAD+ LY+ M+ + + ENLDV Q Sbjct: 64 DALGGEMGLAADRASIQRRLLNTGKGPAVHALRMQADKFLYQRIMKETLENTENLDVRQL 123 Query: 123 EVAGFNTEKNI----ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSP 178 V TE++ ++ +V + + V+L TGT+LRG I +G+ G G P Sbjct: 124 LVTELITEESTGEKRVTGVVCETGERLTAHAVILATGTYLRGRIILGETIYDGGPNGQRP 183 Query: 179 SNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQI 238 + + +S R KTGTPAR+D +T+ +T Q D FSF+TD + + Q Sbjct: 184 AMAFSDSLRTAGLRLMRFKTGTPARVDRRTLDLAETALQEGDTDAPAFSFLTDTMPDAQT 243 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C +T TN TH +I N+ + + +G I+ GPRYCPSIE KI RF ++ HQ+FLEPE Sbjct: 244 PCYLTYTNEATHAVIRANLHRAPMANGVIEGIGPRYCPSIETKIARFPDKERHQLFLEPE 303 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL+T+ +Y G+ST+LP ++Q +F+RTIPG+ ++RPGYAIEYD ++P +L +L K Sbjct: 304 GLHTNEIYVQGMSTSLPTDVQEEFLRTIPGMHHARMMRPGYAIEYDCLDPLQLEASLAVK 363 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 +I+GL+ AGQ NGT+GYEEAAAQGLVAGIN+AR + + R+D YIGV+IDDL +K Sbjct: 364 EIAGLYSAGQANGTSGYEEAAAQGLVAGINAARACMGEEPLILRRSDGYIGVLIDDLVTK 423 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYRM TSRAEYR+ LR DNAD RLTPIG ++G + + R RF + LL Sbjct: 424 GTEEPYRMMTSRAEYRLVLRQDNADLRLTPIGRRIGLVSDARWTRFTAKRGAIDAALRLL 483 Query: 479 KSLVLTSKNLSSTSISFKQDGKTRTAYEFLSY----PDFSI-QNLFSICPDARKFSSLVI 533 + L+ + ++ RT + D+ + +F + P + V Sbjct: 484 RERRLSPSAETEALLAGAGISPLRTPMTLFALLAREGDYRVLAAVFDLPP----LADDVR 539 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E ++I + Y Y +Q + ++ E R IP FDY+++ +L E EKLS ++P ++ Sbjct: 540 EEVEITARYDGYIRKQEEQIARMERLEARRIPAAFDYAAVTSLRLEAAEKLSAVRPRSIG 599 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I G++PA +++LL+Y+++ Sbjct: 600 QASRISGVSPADISVLLVYLER 621 >gi|154496172|ref|ZP_02034868.1| hypothetical protein BACCAP_00456 [Bacteroides capillosus ATCC 29799] gi|150274727|gb|EDN01791.1| hypothetical protein BACCAP_00456 [Bacteroides capillosus ATCC 29799] Length = 621 Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust. Identities = 270/618 (43%), Positives = 365/618 (59%), Gaps = 9/618 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++D+ VIG GHAG EAA AA+LG T T +G+M CNPAIGG GKGHLVREIDA Sbjct: 7 TFDIAVIGAGHAGIEAALAAARLGLQTVCFTVNLDAVGNMPCNPAIGGTGKGHLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR ADAA IQ+R+LN KGPAV R QADR Y+ M+ + QENL V Q EV Sbjct: 67 LGGEMGRAADAACIQYRILNKGKGPAVWSLRAQADRREYQKVMKHTLERQENLWVKQAEV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 TE+ +S++V ++ V+ TGTFL G +G + +G G S + L + Sbjct: 127 VEIRTEQGAVSAVVTATGAVYAVKAAVVCTGTFLGGRTIVGDVVRDSGPDGLSAALPLTD 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 R KTGTP R+ +++ + K E Q D PFSF T + C +T Sbjct: 187 CLKSLGLSIRRFKTGTPPRVHRRSVDFSKMELQPGDPDAQPFSFETATAPENKAVCHLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH +I N+ S +Y G I+ GPRYCPSIE KIVRF E+ HQ+F+EP GL+T+ Sbjct: 247 TNAATHAVIRANLDRSPLYDGTIEGVGPRYCPSIETKIVRFPEKERHQLFIEPMGLDTEE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+S++LPEE+Q + + TIPGLE+ + R YAIEYD ++P EL PTLE KK+ GL+ Sbjct: 307 LYIQGLSSSLPEEVQVEMLHTIPGLERAEMTRAAYAIEYDCVDPTELLPTLECKKVPGLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ NG++GYEEAAAQGLVAGIN+A K + SR YIGV+IDDL +KG EPY Sbjct: 367 GAGQFNGSSGYEEAAAQGLVAGINAALKLLGRPPMVLSRDQGYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSR EYR+ R DNAD RLT +G ++G + E +R+ + +Y + L T Sbjct: 427 RMMTSRTEYRLLCRQDNADRRLTGVGHEVGLVSE---ERYRAMLDKYAAVDRECARLERT 483 Query: 485 SKNLSSTSISFKQDGKTRTA------YEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 + S + D A + L P + +L + P + V E ++I Sbjct: 484 GVSPSPVLDALLSDKGEPPAPNGARLADLLRRPRMTYGDLTPLDPARPDLPAAVTEAVEI 543 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + Y Y RQ + +E++ E R +P D DY SL L E ++KLS ++P NL QAS+I Sbjct: 544 DLKYRGYIERQQRQVEEMRRLESRPLPPDLDYQSLQGLRLEARQKLSEIRPLNLGQASRI 603 Query: 599 EGMTPAALNLLLIYIKKN 616 G++PA + L+I +++ Sbjct: 604 SGVSPADIAALMIALERG 621 >gi|28379976|ref|NP_786868.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus plantarum WCFS1] gi|308182179|ref|YP_003926307.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus plantarum subsp. plantarum ST-III] gi|38257498|sp|Q88RX6|MNMG_LACPL RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|28272817|emb|CAD65746.1| cell division protein GidA [Lactobacillus plantarum WCFS1] gi|308047670|gb|ADO00214.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus plantarum subsp. plantarum ST-III] Length = 636 Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust. Identities = 266/623 (42%), Positives = 362/623 (58%), Gaps = 8/623 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R YDVIV+G GHAG EAA AA++G T L+T + M CNP++GG KG +VREID Sbjct: 10 RDYDVIVVGAGHAGSEAALAAARMGNRTLLMTINLDMVAFMPCNPSVGGPAKGIVVREID 69 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G MGR D +Q R+LN KGPAVR R QAD+ Y M+ I + NL + QG Sbjct: 70 ALGGEMGRNIDKTYVQMRMLNTGKGPAVRALRAQADKHAYHAEMKHTIEREPNLTLRQGI 129 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V G E + ++ + +VVLTTGT RG I IG+L +G P+ L Sbjct: 130 VDGLIVEDGVCKGVITNTGARYSAKSVVLTTGTAARGKIIIGELMYSSGPNNSQPAMKLS 189 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT---DKIT-NRQIE 239 + F+ R KTGTP R+DG TI + TE+Q D FSF T D I Q+ Sbjct: 190 GDLERLGFNLERFKTGTPPRVDGNTIDYSVTEEQPGDPEPHHFSFETKDADYIDLKHQLS 249 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +T TN TH+II EN+ + +++G I+ GPRYCPSIEDKIVRF ++ HQ+FLEPEG Sbjct: 250 CWLTYTNETTHKIIRENLDRAPMFTGVIEGVGPRYCPSIEDKIVRFADKKRHQLFLEPEG 309 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 NTD Y G+ST++PEE+Q + + +I GLE ++RPGYAIEYD + P +L TLETK Sbjct: 310 RNTDEWYVQGLSTSMPEEVQQRILHSIKGLEDAEMMRPGYAIEYDVVAPYQLKATLETKL 369 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 + L+ AGQ NGT+GYEEAA QGL+AGIN+ ++ R+D+YIGVMIDDL +KG Sbjct: 370 VKNLYTAGQTNGTSGYEEAAGQGLIAGINAGLRALDRGQFTLKRSDAYIGVMIDDLVTKG 429 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYR+ TSRAEYR+ LR DNAD RLT G +LG I + R F Q L Sbjct: 430 TNEPYRLLTSRAEYRLILRHDNADLRLTDKGRELGLIDDERYAAFEAKRQAIKNELDRLG 489 Query: 480 SLVLTSKNLSSTSISFKQDGKTRT---AYEFLSYPDFSIQNLFSICPDA-RKFSSLVIER 535 + + + + + G+ + A +FL P+ +L P A VIE+ Sbjct: 490 KIRIKPNDEVNAFLRAHNSGELKDGVLAADFLKRPEVQYADLMKFIPAAPEPLERHVIEQ 549 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ YA Y + +K E + IP DY ++ L+ E +KL ++P + QA Sbjct: 550 VEIQIKYAGYIQKAEERVDRLKKMEAKKIPDRIDYDAIDGLATEAHQKLKKIQPTTIAQA 609 Query: 596 SKIEGMTPAALNLLLIYIKKNTV 618 S+I G+ PA + +L +YI++ + Sbjct: 610 SRISGVNPADIAILSVYIQQGRI 632 >gi|313904718|ref|ZP_07838092.1| glucose inhibited division protein A [Eubacterium cellulosolvens 6] gi|313470511|gb|EFR65839.1| glucose inhibited division protein A [Eubacterium cellulosolvens 6] Length = 631 Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust. Identities = 253/625 (40%), Positives = 371/625 (59%), Gaps = 5/625 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 +I ++YDV+V+G GHAGCEAA +A+LG +T + T +I M CNP +GG KGHLVR Sbjct: 3 VIEKTYDVVVVGAGHAGCEAALASARLGLNTIVFTVSVDSIAMMPCNPNVGGTSKGHLVR 62 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G MG+ D IQ ++LN KGPAV R QAD+ Y M+ + +QENL + Sbjct: 63 EIDALGGEMGKNIDRTFIQSKMLNRSKGPAVHSLRAQADKREYSQRMREVMENQENLTIK 122 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q EV+ E + + ++ VVL TG +L G P G G + Sbjct: 123 QAEVSEIIVEDGVCKGVKTFSGAIYHSKAVVLCTGVYLNSRCLYGDTVNPTGPNGLQTAT 182 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KITNRQI 238 L +S + R KTGTPAR+D +TI + K E+Q D ++PFSF TD + Q+ Sbjct: 183 HLTDSLKANGIEIFRFKTGTPARIDKRTIDFSKMEEQKGDNPVVPFSFSTDPEDVQIEQV 242 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C +T TN +TH II +NI S +YSG I + GPRYCPSIEDK+V+F +++ HQ+F+EPE Sbjct: 243 SCWLTHTNEKTHEIIRKNIDRSPLYSGKIHATGPRYCPSIEDKVVKFADKDSHQVFIEPE 302 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 G T+ +Y +G+S+++PE++Q R++PGLE I+R YAIEYD INP +L +LE K Sbjct: 303 GRYTNEMYIDGMSSSMPEDVQDAMYRSVPGLENAKIVRNAYAIEYDCINPIQLDASLEFK 362 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 KI GLF GQ NG++GYEEAAAQG++AG+N+A + + + R+++YIGV+IDDL +K Sbjct: 363 KIKGLFSGGQFNGSSGYEEAAAQGIIAGLNAALEVKGEEPVILDRSEAYIGVLIDDLVTK 422 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIG-ERRQKRFAKYIQEYNFLRSL 477 EPYRM TSRAEYR+ LR DNAD RL G + G + E +K K Q + + Sbjct: 423 QTFEPYRMMTSRAEYRLLLRQDNADLRLRKYGHRAGLVSDEEYEKTLLKEKQIKEEIERV 482 Query: 478 LKSLVLTSKNLSSTSISFKQD--GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIER 535 + V ++ + +S + E + P+ + + L I + + E+ Sbjct: 483 ENTYVGQTEKVQKFLVSHNSTELKSGSSLAELIRRPELNYEMLAEIDEARPELPAATAEQ 542 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 + I Y Y RQ+ + + K +E R IP +Y +P+L E ++KL +P N+ QA Sbjct: 543 VSIHIKYEGYIKRQLKQVEAFKKKEARKIPASINYDDVPSLRIEARQKLEQYRPMNIGQA 602 Query: 596 SKIEGMTPAALNLLLIYIKKNTVKL 620 S+I G++P+ +++L++Y++ KL Sbjct: 603 SRISGVSPSDISVLMVYLESIGKKL 627 >gi|42561530|ref|NP_975981.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|42561553|ref|NP_976004.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|81170560|sp|Q6MRU5|MNMG_MYCMS RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|42493029|emb|CAE77623.1| Glucose inhibited division protein A [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|42493052|emb|CAE77646.1| Glucose inhibited division protein A [Mycoplasma mycoides subsp. mycoides SC str. PG1] Length = 629 Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust. Identities = 258/621 (41%), Positives = 374/621 (60%), Gaps = 14/621 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+GGGHAG EAA +A+L TALI I +M CNP++GG KG +VREIDA Sbjct: 4 NYDVIVVGGGHAGVEAALASARLNKKTALINLYEDKIATMPCNPSVGGPAKGIVVREIDA 63 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M + ADA +Q ++LN +GP V R Q+D+E Y M+ I +Q+NLD+I Sbjct: 64 LGGEMAKAADATALQTKLLNSSRGPGVWALRVQSDKEEYSKYMRNVIKNQKNLDLITRAC 123 Query: 125 AGFNTEKN-IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 G ++N ++ I + D +++ V++TTGT+L+ I G + +G + + + Sbjct: 124 TGLVYDENKTVTGIYLDDQTILNAKAVIITTGTYLKSEILKGVDRYESGPNNEKTTKGIS 183 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--NRQIECG 241 S + R KTGTPAR+ ++ + + + FSF T T +Q C Sbjct: 184 QSLIDLGIKLMRFKTGTPARVYRDSVDLSNAVLEPGTDMKLAFSFSTSTYTPIEKQQPCY 243 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 + + LET +II +N++ SA+YSG +KS GPRYCPS EDK VRF E++ HQIF+EPE LN Sbjct: 244 LIHSTLETKKIIEDNLEKSAMYSGTVKSIGPRYCPSFEDKAVRFREKDTHQIFIEPETLN 303 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 D Y G ST++P E+Q ++++PG E V + YAIEYD I+P +L P+LE K + Sbjct: 304 GDTWYVQGFSTSMPIEVQEMMLKSLPGFENVRVKHWAYAIEYDCIDPMQLSPSLELKDVK 363 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 LF AGQINGT+GYEEAA QGL+AGIN++RK + LD I R ++YIGVMIDDL +KGV Sbjct: 364 NLFTAGQINGTSGYEEAAGQGLIAGINASRKIDGLDPIILRRDEAYIGVMIDDLINKGVW 423 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAE+R+ LR DNA+ RL G ++G I ++ ++ Y++E LK + Sbjct: 424 EPYRLLTSRAEHRLLLRNDNAETRLKQYGKEIGLISDQEWNQYLIYVKEIEQAIKELKEI 483 Query: 482 VLTSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 T K S +I+ K + + YE + P I L P +K + ++ + Sbjct: 484 RFTPK--SQLAINLKNKNQADLSHGYSGYEIIKIPTVDINELIEFIPSLQKLKTNQLQSI 541 Query: 537 QIESSYAAYTG--RQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 IE + Y RQ+++ K +K E K+ IP D +YS + L+ E K+KL ++P N+ Q Sbjct: 542 VIEIRFEGYVKKERQLVD-KLVKLERKK-IPLDINYSKVDNLATEAKDKLEKIRPLNIGQ 599 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G+ PA + +LL Y+KK Sbjct: 600 ASRITGVNPADIQMLLFYLKK 620 >gi|315650201|ref|ZP_07903276.1| glucose inhibited division protein A [Eubacterium saburreum DSM 3986] gi|315487558|gb|EFU77866.1| glucose inhibited division protein A [Eubacterium saburreum DSM 3986] Length = 628 Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust. Identities = 263/629 (41%), Positives = 370/629 (58%), Gaps = 25/629 (3%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 +I + YD++V+G GHAGCEAA +A+LG T + T +I M CNP IGG KGHLV+ Sbjct: 2 IIEKKYDIVVVGAGHAGCEAALASARLGLKTIIFTVSADSIAMMPCNPNIGGSSKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DAL G MG+ D IQ ++LN KGPAV R QAD++ Y M++ + + NL + Sbjct: 62 ELDALGGEMGKCIDKTFIQSKMLNASKGPAVHSLRAQADKQEYSKQMRKTLENTPNLTIC 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q E+ E NI + VVL TGT+L G++ G G +N Sbjct: 122 QKEITKLIIEDNICRGVESISGGKYYAKAVVLATGTYLNARCIYGEVAEYTGPNGLKSAN 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KITNRQI 238 L +S R KTGTPAR+DG++I + ++Q+ D ++PFSF TD + Q+ Sbjct: 182 HLSDSLSDVGISLNRFKTGTPARVDGRSIDYTVMQEQYGDNPVVPFSFETDPDSVQKEQV 241 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 +C + TN TH II ENI S ++SG IK GPRYCPSIEDK+V+F +++ HQIF+EPE Sbjct: 242 KCYLAYTNEYTHEIIRENIDRSPLFSGAIKGTGPRYCPSIEDKVVKFPDKDRHQIFVEPE 301 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL T+ +Y +G+S++LPE++Q + IR+I G E NI+R GYAIEYD I+ ++L +LE + Sbjct: 302 GLYTNEMYLSGLSSSLPEDVQDKMIRSIKGFENANIVRNGYAIEYDCIDARQLKDSLEFR 361 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 + GLF AGQ NG++GYEEAA QGL+AGIN+A K + + R YIGV+IDDL +K Sbjct: 362 NLEGLFAAGQFNGSSGYEEAAVQGLMAGINAAMKVLGREPVIIGRDQGYIGVLIDDLVTK 421 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 EPYRM TSR+EYR+ LR DNAD RLT IG K+G I E+R YN L Sbjct: 422 ESHEPYRMMTSRSEYRLLLRQDNADLRLTKIGYKVGLISEKR----------YNSLLEKE 471 Query: 479 KSL---VLTSKNLSSTSISFKQDGKTRTA----------YEFLSYPDFSIQNLFSICPDA 525 K + V KN+ + S QD R E + P+ + + D Sbjct: 472 KQIANEVERLKNIHIGATSKVQDFLVRNGSTPLQTSANLAELIRRPELNYDLTAELDDDR 531 Query: 526 RKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 +K V +++ I Y Y RQ + K+ K E + IP D DYS + +L E +KL Sbjct: 532 KKLRKDVRDQVNINIKYEGYIKRQESQVKQFKKLENKKIPPDIDYSKVNSLRIEAVQKLG 591 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYIK 614 ++P ++ QAS+I G++PA + +LL+Y++ Sbjct: 592 KVRPSSVGQASRISGVSPADITVLLVYLE 620 >gi|266620967|ref|ZP_06113902.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium hathewayi DSM 13479] gi|288867389|gb|EFC99687.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium hathewayi DSM 13479] Length = 635 Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust. Identities = 257/622 (41%), Positives = 384/622 (61%), Gaps = 11/622 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + SYD++V+G GHAGCEAA AA+LG T + T +I M CNP IGG KGHLVRE Sbjct: 4 LEESYDIVVVGAGHAGCEAALAAARLGLETIMFTVSVDSIALMPCNPNIGGSSKGHLVRE 63 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DA+ G MG+ D IQ ++LN KGPAV R QAD++ Y M+ + + ++L + Q Sbjct: 64 LDAMGGEMGKNIDKTFIQSKMLNESKGPAVHSLRAQADKQNYSREMRNTLENTDHLTIRQ 123 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 EV E +++ + ++ C VL TGT+L+ G + G G +N Sbjct: 124 AEVTDIIVENGVLTGVKTFSGAVYHCKAAVLATGTYLKARCIYGDVSNATGPNGLQAANH 183 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KITNRQIE 239 L +S + + R KTGTPAR+D ++I + + E+QF D++++PFSF TD I Q+ Sbjct: 184 LTDSLKEHGIEMYRFKTGTPARVDKRSIDFSRMEEQFGDKKIVPFSFSTDPETIQKEQVS 243 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +T T+ +TH II N+ S ++SG I+ GPRYCPSIEDK+V+F ++N HQ+F+EPEG Sbjct: 244 CWLTYTSEKTHEIIRANLDRSPLFSGAIEGTGPRYCPSIEDKVVKFPDKNRHQVFVEPEG 303 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T+ +Y G+S++LPE++QH RT+PGLE V I+R YAIEYD IN ++L TLE K Sbjct: 304 LYTNEMYLGGMSSSLPEDVQHAMYRTVPGLEHVKIVRNAYAIEYDCINSRQLKATLEFKT 363 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 ISGLF GQ NG++GYEEAA QG +AG+N++ K + R+ +YIGV+IDDL +K Sbjct: 364 ISGLFSGGQFNGSSGYEEAAVQGFMAGVNASMKVLGRESFVLDRSQAYIGVLIDDLVTKE 423 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRM TSRAEYR+ LR DNAD RL IG ++G + + +++ K +++ + + + +K Sbjct: 424 NHEPYRMMTSRAEYRLLLRQDNADLRLMGIGHEIGLVSD---EQYEKLLEKESAIETEIK 480 Query: 480 SLVLTSKNLSSTSISF-KQDGKT-----RTAYEFLSYPDFSIQNLFSICPDARKFSSLVI 533 L T+ S F +++G T T E + P+ + L + + S VI Sbjct: 481 RLESTNIGASKEVQEFLERNGSTLLKTGTTLAELIRRPELNYVMLTELDSKRPELSVDVI 540 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E++ I Y Y RQ + + K E + + DFDYSS+ +L E +KL + +P ++ Sbjct: 541 EQVDINIKYDGYIRRQKQQVAQYKKLENKKLDADFDYSSVKSLRKEAVQKLDLYRPMSIG 600 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I G++PA +++LL+++++ Sbjct: 601 QASRISGVSPADISVLLVHLEQ 622 >gi|260061290|ref|YP_003194370.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Robiginitalea biformata HTCC2501] gi|88785422|gb|EAR16591.1| glucose-inhibited division protein A [Robiginitalea biformata HTCC2501] Length = 624 Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust. Identities = 273/626 (43%), Positives = 387/626 (61%), Gaps = 15/626 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M YDVIV+GGGHAGCEAAA AA LG+ T L+T TIG MSCNPA+GG+ KG +VR Sbjct: 3 MFTEEYDVIVVGGGHAGCEAAAAAANLGSKTLLVTMNLQTIGQMSCNPAMGGIAKGQIVR 62 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADR----ELYRLAMQREILSQEN 116 EIDAL G G V+D + IQF++LN KGPA+ PRTQ DR E +RL+++R ++ Sbjct: 63 EIDALGGYSGIVSDRSAIQFKMLNKSKGPAMWSPRTQNDRMRFAEEWRLSLER----TQH 118 Query: 117 LDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGD 176 LD Q V+ ++ + + IR +VVLT GTFL G+IHIG+ + GR G+ Sbjct: 119 LDFYQEMVSDLIVSEDRVVGVRTSLGLEIRGRSVVLTNGTFLNGLIHIGEKQFGGGRAGE 178 Query: 177 SPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR 236 + + + FDTGR+KTGTP R+DG+++ + K Q D FS++ R Sbjct: 179 RAARGITEQLAEMGFDTGRMKTGTPPRVDGRSLDFSKMIPQPGDAEPGRFSYLDTPKLTR 238 Query: 237 QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLE 296 Q EC +T T+ E H ++ME S +++G I+S GPRYCPSIEDKI RF +++ HQ+F+E Sbjct: 239 QRECHMTYTSPEVHELLMEGFDRSPMFNGRIQSIGPRYCPSIEDKIHRFKDKDRHQLFVE 298 Query: 297 PEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLE 356 PEG +T VY NG ST+LPE++Q + +R++ G E V RPGYAIEYDY P +L TLE Sbjct: 299 PEGWDTVEVYVNGFSTSLPEDVQFRALRSVAGFENVKFFRPGYAIEYDYFPPTQLRHTLE 358 Query: 357 TKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 TK I L+ AGQINGTTGYEEAA+QGL+AGIN+ K N+ + R ++YIGV+IDDL Sbjct: 359 TKLIENLYFAGQINGTTGYEEAASQGLMAGINAHLKLNEKEPFILRRDEAYIGVLIDDLI 418 Query: 417 SKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRS 476 +KG EPYRMFTSRAEYR LR DNAD RLT ++G E R + + + L Sbjct: 419 TKGTEEPYRMFTSRAEYRTLLRQDNADLRLTEKSFRMGLASEERMRAVEQKKAQSQDLVG 478 Query: 477 LLK--SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLF---SICPDAR--KFS 529 K S V N ++ K + ++ S P ++++ S+ R + Sbjct: 479 FFKKTSFVPEEINPILETVGSKNVDQGDKLFKVFSRPQVQMEHMMQLESVSEYVRENQLG 538 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 V+E+ +IE Y+ Y ++ A +++ E IP+ FDYS + +LS E +EKL ++P Sbjct: 539 QEVLEQAEIEVKYSGYIEKEKNNADKLQRLENVKIPEGFDYSQVKSLSYEAREKLGRIRP 598 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKK 615 L QAS++ G++P+ +++L++++ + Sbjct: 599 ATLSQASRVSGVSPSDISVLMVFLNR 624 >gi|307748094|gb|ADN91364.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Campylobacter jejuni subsp. jejuni M1] Length = 619 Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust. Identities = 270/618 (43%), Positives = 369/618 (59%), Gaps = 15/618 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EA+A AA++G T L+T IG+ SCNPAIGGL KGHLV+E+DA+ Sbjct: 2 FDVIVIGGGHAGVEASAAAARMGKKTLLLTTLIEQIGAASCNPAIGGLAKGHLVKELDAM 61 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLMG + D AGIQFR+LN KG AV+G R Q D + YR+ + ++L NL++ Q + + Sbjct: 62 GGLMGEITDEAGIQFRILNESKGVAVQGSRAQIDMDKYRIIARNKLLKLPNLEISQEQAS 121 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + + V+LTTGTFL G+IH+G+ K+ AGR+G+ S +L N Sbjct: 122 VLIVENDEVKGVKTNLENTYFAKKVILTTGTFLNGLIHVGENKLQAGRVGELASVNLGNY 181 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 GRLKTGT R+D K+I + E Q D FSF + Q+ C I RT Sbjct: 182 LQTLGLKMGRLKTGTCPRVDAKSIDFSVLEIQDGDVNPKAFSFRSKNFNPTQLPCYIART 241 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N TH II N + +++G I+ GPRYCPSIEDKI RF ++ H +F+EP+ ++ Sbjct: 242 NTTTHEIIKNNFYRAPLFTGQIEGVGPRYCPSIEDKINRFSDKESHHLFIEPQTIDATEY 301 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG ST+LP E+Q Q +R++ G E I R GYAIEYDYI P EL TLE KKI L+ Sbjct: 302 YINGFSTSLPYEVQIQMLRSVKGFEDAKITRFGYAIEYDYIEPTELKHTLELKKIKNLYC 361 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAAAQG +AGIN++ + + + R ++YIGV+IDDL KG EPYR Sbjct: 362 AGQINGTTGYEEAAAQGFMAGINASLSIDMKEPLILRRDEAYIGVLIDDLVVKGTKEPYR 421 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL-VLT 484 MFTSRAE+R+ LR +N RL G LG + E+ YIQ N +L K L L Sbjct: 422 MFTSRAEFRLLLREENVILRLGKYGYDLGLLSEQD----FTYIQ--NIANNLQKGLEFLL 475 Query: 485 SKNLSST--------SISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 SK + S+ + + ++ F I+ L + P + + + Sbjct: 476 SKEFTPNNQNNAFLESLGEDKISSIVNLQKIVARASFDIEKLKKLDPMFETMDNYSLREI 535 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 E+ Y Y Q + +++K + IP++FD+ S+ LSNE+ EKL+ KP + AS Sbjct: 536 LNEAKYYHYISMQKAQVEKMKNLSELKIPENFDFKSVSGLSNEVVEKLNHHKPPTIFAAS 595 Query: 597 KIEGMTPAALNLLLIYIK 614 +I G+TPAAL++L IYIK Sbjct: 596 QISGITPAALDILQIYIK 613 >gi|189485614|ref|YP_001956555.1| glucose-inhibited cell division protein GidA [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|205831570|sp|B1H0R2|MNMG_UNCTG RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|170287573|dbj|BAG14094.1| glucose-inhibited cell division protein GidA [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 597 Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust. Identities = 253/621 (40%), Positives = 365/621 (58%), Gaps = 49/621 (7%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + R Y+V V+G GHAGCEA+ A++G T +IT ++ M CNPA+GG+ KG +VRE Sbjct: 1 MERKYNVAVVGAGHAGCEASLACARMGLKTLIITLNADSMARMPCNPAVGGIAKGQMVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDA+ G +GR+ D A +QF++LN +GPAV PR Q D+ELY + M + + +Q+NL+++Q Sbjct: 61 IDAMGGEIGRITDRAVLQFKMLNSSRGPAVWSPRAQCDKELYSVLMSKSVQNQQNLEILQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 E + + + + I VV+TTGTFL+G IH+GK+ GR + + Sbjct: 121 SEATSLTVKNGKVCGVKILTGETIEADAVVITTGTFLKGTIHLGKMHFNGGRFNEVSALY 180 Query: 182 LFNSFMK-FDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD----KITNR 236 L S ++ GR KT T R++ ++I + K +QF DE+ +PFS+ T + + Sbjct: 181 LSKSLIEDCGLKLGRFKTTTTPRINSRSIDYSKMTEQFGDEKPVPFSYSTKVEEWRKNLK 240 Query: 237 QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLE 296 Q+ C +T TN TH+I+ +N+ S+IY G++ S PRYCPSIE+KI R+ E+ H +F+E Sbjct: 241 QLSCWLTYTNPITHKIVSDNLGLSSIYIGEVNSKSPRYCPSIEEKIERYPEKTSHHVFVE 300 Query: 297 PEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLE 356 PEG NT+ VY NG+ T LP +Q Q I +I GLE +IR GYAIEYDY +P ++ TLE Sbjct: 301 PEGYNTNEVYLNGLYTGLPFNLQQQMINSIVGLENAKVIRYGYAIEYDYSSPLQIKKTLE 360 Query: 357 TKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 TK + LFL GQINGTTGYEEAAAQG VAG+N+ K R +SYIG+++DD+T Sbjct: 361 TKTVKNLFLGGQINGTTGYEEAAAQGFVAGVNAGLKVLGKTPFILERNESYIGILVDDIT 420 Query: 417 SKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRS 476 +KG+ EPYRMFTSRAEYR+S+R DNAD RL G +G I ++ K+F Y Sbjct: 421 TKGMDEPYRMFTSRAEYRLSIRNDNADLRLMDAGHSIGLISDKAYKKFELY--------- 471 Query: 477 LLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 R A F + + +NL PD S IE+ Sbjct: 472 -------------------------RKA--FTDICENNAENL----PDDEDLSPWSIEKA 500 Query: 537 Q----IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 + I Y Y Q ++K + R IP+DFDY+ L +LS E K++L ++P + Sbjct: 501 KEEVYIHKKYEGYIEIQNKMINKMKKSKDRKIPEDFDYNKLKSLSAETKQRLFEVRPQTI 560 Query: 593 LQASKIEGMTPAALNLLLIYI 613 QAS+I + P+ + +L +Y+ Sbjct: 561 GQASRICAIKPSDIAILTVYL 581 >gi|313892286|ref|ZP_07825879.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Dialister microaerophilus UPII 345-E] gi|313119424|gb|EFR42623.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Dialister microaerophilus UPII 345-E] Length = 624 Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust. Identities = 256/616 (41%), Positives = 381/616 (61%), Gaps = 8/616 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAGCEAA AA+LGA T L T + M CNPAIGG GK HLV+EIDA Sbjct: 6 TYDVIVVGAGHAGCEAALAAARLGARTLLFTISLENVAMMPCNPAIGGPGKSHLVKEIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG AD IQ R+LN+ KGPAV R Q+D+ Y + + + +NL++ Q ++ Sbjct: 66 LGGQMGIAADETAIQMRMLNLGKGPAVYALRAQSDKGAYHRYFKSILENTDNLELKQAQI 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ + + + R V+L TGT+L I +G+ G G PS L Sbjct: 126 MDIVVEDGKCKGVITEFDEIYRSKAVILCTGTYLDSRIIVGEYMYTGGPNGMRPSVGLSE 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + K D R KTGTP+R+DG+++ +D + + D+ FSF++++ +C ++ Sbjct: 186 NLKKHGIDILRFKTGTPSRVDGRSLNYDHMKLEEGDKENHAFSFLSERKDRNIKDCYLSY 245 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH+I+ +N+ S IYSG I G RYCPSIEDK+VRF +++ HQ+F+EPEGL+T Sbjct: 246 TNENTHKILRDNLHRSPIYSGKIHGVGARYCPSIEDKVVRFADKDKHQLFVEPEGLDTTE 305 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+ST++P ++Q+ F++TIPG E V ++RP YAIEYD ++P +L+PTLE K+ GL+ Sbjct: 306 MYVQGMSTSMPIDVQYAFLKTIPGFENVKVMRPAYAIEYDLLDPLQLYPTLEVIKMEGLY 365 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ NGT+GYEEAAAQGL+AGIN+A K + +R ++YIG +IDDL +KG EPY Sbjct: 366 SAGQSNGTSGYEEAAAQGLMAGINAALKIQGKEPFILARHEAYIGTLIDDLVTKGTNEPY 425 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSR+EYR+ LR DNAD RLT G K+G + E R K F + +++ + + T Sbjct: 426 RMMTSRSEYRLILRQDNADLRLTEKGYKIGLVNEERYKHFIERKRKFEEAMDYITTKRFT 485 Query: 485 SKNLSSTSISFKQDGKTRT-----AYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 K + + ++ G T A + L P+ + +++ ++F + +E ++I Sbjct: 486 PK--EDVNKALEELGTTPLTTGIGADKILKRPEITYKDMVEKL-GCKEFDAEAVEEMEIT 542 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ K+ + E + IP+D D+ L +S E ++KL+ +KP +L QAS+I Sbjct: 543 VKYEGYITRQENAIKKAEKMENKKIPQDMDFMKLEGISIEARQKLTKIKPLSLGQASRIS 602 Query: 600 GMTPAALNLLLIYIKK 615 G++PA + +L++Y+KK Sbjct: 603 GVSPADIAILMVYVKK 618 >gi|315606900|ref|ZP_07881907.1| glucose inhibited division protein A [Prevotella buccae ATCC 33574] gi|315251408|gb|EFU31390.1| glucose inhibited division protein A [Prevotella buccae ATCC 33574] Length = 623 Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust. Identities = 260/622 (41%), Positives = 371/622 (59%), Gaps = 15/622 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAGCEAA AA +GA T LIT + I MSCNPA+GG+ KG +VREIDAL Sbjct: 5 YDVIVIGGGHAGCEAATAAAHMGAHTCLITMDMNKIAQMSCNPAVGGIAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG V D IQFR+LN+ KGPAV PR Q DR + + + +NLDV Q + Sbjct: 65 GGQMGLVTDNTAIQFRMLNIGKGPAVWSPRAQCDRGKFIWEWRTMLDRTDNLDVWQDQAD 124 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + R +V++T GTFL G++H+G+ KI GR + + S Sbjct: 125 ELIVENGEAVGVTTIWGVAFRAKSVIVTAGTFLNGLMHVGRHKIEGGRCAEPAVHYFTES 184 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + + R+KTGTP R+D +++ ++ E Q D FS+M + +Q+ C T Sbjct: 185 ITRHGIVSARMKTGTPVRIDKRSVHFEDMEIQQGDSGFHRFSYMGQERKLKQLPCWTCYT 244 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N E H ++ + S +++G I+S GPRYCPSIE K+V F +++ H +FLEPEG NT+ + Sbjct: 245 NGEVHEVLKGGLADSPLFNGQIQSTGPRYCPSIETKLVTFPDKDQHPLFLEPEGENTNEM 304 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG S+++P +IQ + I IP L I RPGYAIEYDY +P +L +LE+K +SGLF Sbjct: 305 YLNGFSSSMPLDIQLEAIHKIPALRDAKIYRPGYAIEYDYFDPTQLKHSLESKILSGLFF 364 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ+NGTTGYEEA QGLVAG+N+A N + +R +SYIGV+IDDLT+KGV EPYR Sbjct: 365 AGQVNGTTGYEEAGGQGLVAGVNAAIHCNGGEPFVMNRDESYIGVLIDDLTTKGVDEPYR 424 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAEYRI LR D+AD+RLT LG +KR+ ++++ + +++ T Sbjct: 425 MFTSRAEYRILLRQDDADSRLTKKAYNLGI---STRKRYDWWLEKKEAIERIIRFCEDTP 481 Query: 486 KNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKF-------SSLVI 533 N + + G T + ++ P+ ++QNL I P ++ + Sbjct: 482 INKEHINPQLEALGTTPLRAGCKLVDLVTRPNLTLQNLSEIIPSLKEILESPKNRKEEIT 541 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E +I+ Y Y R+ I A ++ E I FDY++L +S E ++KLS ++P L Sbjct: 542 EAAEIKMKYKGYIDRERIVADKMHRLENIKIKGRFDYATLHEISTEGRQKLSSIEPETLA 601 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I G++P+ +N+LL+ + + Sbjct: 602 QASRIPGVSPSDINVLLVLLGR 623 >gi|41058586|gb|AAR99279.1| glucose-inhibited division protein A [Candidatus Blochmannia americanus] Length = 591 Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust. Identities = 272/588 (46%), Positives = 361/588 (61%), Gaps = 17/588 (2%) Query: 41 IGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADR 100 +G MSCNPA+GG+GKGHLV+EIDA+ G+M AD AGIQFR+LN KG AVR R QAD+ Sbjct: 1 LGQMSCNPAVGGIGKGHLVKEIDAMGGVMAYAADKAGIQFRILNSSKGAAVRATRAQADK 60 Query: 101 ELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCST-VVLTTGTFLR 159 LYR ++ + Q+ L +IQ V +KN I +V+ M ST VVLTTGTFL Sbjct: 61 ILYRQVIRSVLEYQKFLSIIQASVEDLIIDKNKIIGVVVPKIGMKFSSTSVVLTTGTFLN 120 Query: 160 GVIHIGKLKIPAGRMGDSPSNSLFNSFMK-FDFDTGRLKTGTPARLDGKTIIWDKTEKQF 218 G IHIG GR GD S+SL + +K RLKTGT R+ I + Q+ Sbjct: 121 GKIHIGMKNFSGGRAGDVESSSLLSERLKGLSLRVNRLKTGTSPRVHANGINFGSLIAQY 180 Query: 219 ADERLIPFSFM-TDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPS 277 +D + FSFM + + Q+ C IT TN TH I+ N+ S +Y+G IK PRYCPS Sbjct: 181 SDNPIPVFSFMGSTEQHPAQVPCYITHTNDNTHEIVRSNLYQSPMYTGLIKGRSPRYCPS 240 Query: 278 IEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRP 337 IEDKI RF +R+ HQIFLEPEGL T +Y NGIST+LP +Q Q IR+I GLE V+IIRP Sbjct: 241 IEDKITRFSDRDAHQIFLEPEGLTTPEIYLNGISTSLPFYVQIQMIRSIRGLENVHIIRP 300 Query: 338 GYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLD 397 GYAIEYD+ +P++L TLE+K +SGLF +GQINGTTGYEEAAAQGL+AGIN+AR S + Sbjct: 301 GYAIEYDFFDPRDLKLTLESKFVSGLFFSGQINGTTGYEEAAAQGLLAGINAARFSQNKE 360 Query: 398 CICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIG 457 R +Y+GV++DDL + G EPYRMFTSRAEYR+SLR DNAD RLT I +LG I Sbjct: 361 GWYPRRDQAYLGVLVDDLCTHGAEEPYRMFTSRAEYRLSLREDNADLRLTAIAQQLGLID 420 Query: 458 ERRQKRFAKYIQEYNFLRSLLK--------SLVLTSKNLSSTSISFKQDGKTRTAYEFLS 509 + R K F + R L+ S V+ N T + + +G+ E L Sbjct: 421 KTRWKAFCLKRENIEKERQRLRDTYIFPYSSDVVQLNNFLKTPLMREANGE-----ELLR 475 Query: 510 YPDFSIQNLFSICP-DARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDF 568 P+ L + + E+++I+ Y Y Q E ++ E L+P D Sbjct: 476 RPEIDYTKLSQLSTFGPFMLDRQIFEQIEIQIKYEGYIRHQQEEIEKYICNENTLLPTDI 535 Query: 569 DYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKN 616 D+ + LS E+ +KL+ +P+++ QAS+I G+TPAA++ LL+++KK Sbjct: 536 DFKVVSGLSKEVIDKLNNCRPYSIGQASRISGITPAAISNLLVWLKKQ 583 >gi|260665205|ref|ZP_05866054.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus jensenii SJ-7A-US] gi|260560942|gb|EEX26917.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus jensenii SJ-7A-US] Length = 634 Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust. Identities = 261/617 (42%), Positives = 362/617 (58%), Gaps = 9/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAA +A++G T LIT + M CNP++GG KG +VREIDAL Sbjct: 10 YDVIVVGAGHAGCEAALASARMGQKTLLITISLDMVAFMPCNPSVGGPAKGTVVREIDAL 69 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ DA IQ R+LN KGPAVR R QAD+ Y M+R I NL + Q V Sbjct: 70 GGQMGKNIDATYIQMRILNTGKGPAVRALRAQADKVQYHETMKRTIEDTPNLTLRQATVD 129 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + ++ + +VVLTTGT RG I IG+L +G + L + Sbjct: 130 ELIVEDGVCHGVITNTGAKYLAKSVVLTTGTSARGRIIIGELTYSSGPNNTIAAIKLSEN 189 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 K F R KTGTP R++G TI + KTE++ D FSF T + Q+ C +T Sbjct: 190 LEKLGFKLRRFKTGTPPRVNGNTIDFSKTEEEPGDTEPRHFSFETKDEDYLKDQLSCWMT 249 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH+II +N+ + +Y+G I+ GPRYCPSIE KIVRF ++ HQIFLEPEG NTD Sbjct: 250 YTNETTHKIIRDNLDRAPMYTGVIEGVGPRYCPSIETKIVRFADKPRHQIFLEPEGKNTD 309 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 Y ST++PEE+Q + +I GLE ++RPGYAIEYD I P +L TLETK I L Sbjct: 310 EYYVGDFSTSMPEEVQQDMVHSIAGLENAEMMRPGYAIEYDVIEPWQLKHTLETKNIKNL 369 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ+NGT+GYEEA QG+VAGIN+A ++ R ++YIGV+IDDL +KG EP Sbjct: 370 FTAGQMNGTSGYEEAGGQGIVAGINAALRAQGKSGFTLGRDEAYIGVLIDDLVTKGTNEP 429 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT G KLG I + R + F ++ ++L + + Sbjct: 430 YRLLTSRAEYRLLLRNDNADLRLTEYGHKLGLISDERYQEFED--KKATIKQTLAELYDI 487 Query: 484 TSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 T K G++ A FL P +I + + + V E+++I Sbjct: 488 TIHPNDEVQAYLKSIGQSPLNAGLKASAFLRRPGVTIAAIEKLSGEKLNSDRYVREQVEI 547 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + YA Y +Q ++ ++++ E + IP+ DYS + L+ E ++K ++P ++ QA +I Sbjct: 548 DVKYAGYIKKQELQVQKLRRLESKKIPEGIDYSKIAGLATEARQKFEKIRPESIAQAERI 607 Query: 599 EGMTPAALNLLLIYIKK 615 G+ PA + +L +YI++ Sbjct: 608 SGVNPADIAILTVYIQQ 624 >gi|218780478|ref|YP_002431796.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Desulfatibacillum alkenivorans AK-01] gi|218761862|gb|ACL04328.1| glucose inhibited division protein A [Desulfatibacillum alkenivorans AK-01] Length = 628 Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust. Identities = 265/623 (42%), Positives = 376/623 (60%), Gaps = 9/623 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YD+IVIG GHAGCEAA AA++G T L T ++ M C+P+IGG GKG LV+E+D Sbjct: 3 KRYDIIVIGAGHAGCEAALAAARMGCKTLLTTIHLDSVAGMPCSPSIGGTGKGQLVKEVD 62 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M RV D + +R LN +KGPAV+ RTQ D+ +Y M++ + Q NLD+ Q + Sbjct: 63 ALGGAMARVTDRTAMSYRTLNTRKGPAVQSTRTQNDKHMYHQMMKQCVEDQPNLDLKQAK 122 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 + + + ++ +V + V+L TGTFL GVIHIG + AGR G+ S SL Sbjct: 123 INRLVLDGDRVAGVVDHFGYEYQAEAVILATGTFLSGVIHIGHKSMKAGRAGEFASYSLA 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + M+ F GR+KTGTPAR+ +I + E+Q +E PFS + + Sbjct: 183 SHLMELGFAMGRMKTGTPARVAKDSIDFSCFEEQAGEENPRPFSLFSKASLLTPMSSFNG 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 RTN THRII +N+ SA+Y G +K RYCPS EDKIV+F ER HQI LE EG++T Sbjct: 243 RTNERTHRIIRDNLSCSALYGGIVKGVSARYCPSFEDKIVKFPERESHQIILEHEGVHTR 302 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y +G+ ++P E+Q + R+IPG+E+V I+RP YAIEYD+++P L PTLETK + GL Sbjct: 303 EIYVSGLGNSMPLEVQIKLYRSIPGMEQVEIMRPAYAIEYDFLHPTGLKPTLETKLVKGL 362 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGT+GYEEA AQG+ AGIN+A K R+++Y+ VM+DDL ++G EP Sbjct: 363 YAAGQINGTSGYEEAGAQGMWAGINAACKIQGRPPFLPDRSEAYMAVMVDDLVTRGTSEP 422 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF---AKYIQ-EYNFLRS-LL 478 YRMFTSRAEYR+ LR DN D RL G LG I + K K IQ E + +RS ++ Sbjct: 423 YRMFTSRAEYRLMLREDNPDLRLMEYGHGLGLIDDDAFKDLIERKKQIQAELDRVRSTII 482 Query: 479 KSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 K L ++ L + ++ + + + P + V +++I Sbjct: 483 KPLPEVNQYLEDKGTAPLKEAAPLD--RLMKRVQLGYDAVEKLAPSPEPINPRVSRQVEI 540 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 Y Y +Q+ E ++ + E+ IP+ FD+ ++ LSNELK KL LKP +L QAS++ Sbjct: 541 AIKYEGYIAKQLREIEKFREMERVRIPEGFDFEAVHGLSNELKAKLGALKPVSLGQASRM 600 Query: 599 EGMTPAALNLLLIYIK--KNTVK 619 EG+TPAAL+ ++I++ KNT K Sbjct: 601 EGITPAALSAVMIHLHQVKNTEK 623 >gi|254558110|ref|YP_003064527.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus plantarum JDM1] gi|300769098|ref|ZP_07078987.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|254047037|gb|ACT63830.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus plantarum JDM1] gi|300493338|gb|EFK28517.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 636 Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust. Identities = 265/623 (42%), Positives = 362/623 (58%), Gaps = 8/623 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R YDVIV+G GHAG EAA AA++G T L+T + M CNP++GG KG +VREID Sbjct: 10 RDYDVIVVGAGHAGSEAALAAARMGNRTLLMTINLDMVAFMPCNPSVGGPAKGIVVREID 69 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G MGR D +Q R+LN KGPAVR R QAD+ Y M+ I + NL + QG Sbjct: 70 ALGGEMGRNIDKTYVQMRMLNTGKGPAVRALRAQADKHAYHAEMKHTIEREPNLTLRQGI 129 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V G E + ++ + +VVLTTGT RG I IG+L +G P+ L Sbjct: 130 VDGLIVEDGVCKGVITNTGARYSAKSVVLTTGTAARGKIIIGELMYSSGPNNSQPAMKLS 189 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT---DKIT-NRQIE 239 + F+ R KTGTP R+DG TI + TE+Q D FSF T D I Q+ Sbjct: 190 GDLERLGFNLERFKTGTPPRVDGNTIDYSVTEEQPGDPEPHHFSFETKDADYIDLKHQLS 249 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +T TN TH+II EN+ + +++G I+ GPRYCPSIEDKIVRF ++ HQ+FLEPEG Sbjct: 250 CWLTYTNETTHKIIRENLDRAPMFTGVIEGVGPRYCPSIEDKIVRFADKKRHQLFLEPEG 309 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 NTD Y G+ST++PEE+Q + + +I GLE ++RPGYAIEYD + P +L TLETK Sbjct: 310 RNTDEWYVQGLSTSMPEEVQQRILHSIKGLEDAEMMRPGYAIEYDVVAPYQLKATLETKL 369 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 + L+ AGQ NGT+GYEEAA QGL+AGIN+ ++ R+D+YIGVMIDDL +KG Sbjct: 370 VKNLYTAGQTNGTSGYEEAAGQGLIAGINAGLRALDRGQFTLKRSDAYIGVMIDDLVTKG 429 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYR+ TSRAEYR+ LR DNAD RLT G +LG I + R F Q L Sbjct: 430 TNEPYRLLTSRAEYRLILRHDNADLRLTDKGRELGLIDDERYAAFEAKRQAIKNELDRLG 489 Query: 480 SLVLTSKNLSSTSISFKQDGKTRT---AYEFLSYPDFSIQNLFSICPDA-RKFSSLVIER 535 + + + + + G+ + A +FL P+ +L P A +IE+ Sbjct: 490 KIRIKPNDEVNAFLRAHNSGELKDGVLAADFLKRPEVQYADLMKFIPAAPEPLERHIIEQ 549 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ YA Y + +K E + IP DY ++ L+ E +KL ++P + QA Sbjct: 550 VEIQIKYAGYIQKAEERVDRLKKMEAKKIPDRIDYDAIDGLATEAHQKLKKIQPTTIAQA 609 Query: 596 SKIEGMTPAALNLLLIYIKKNTV 618 S+I G+ PA + +L +YI++ + Sbjct: 610 SRISGVNPADIAILSVYIQQGRI 632 >gi|329121703|ref|ZP_08250320.1| glucose inhibited division protein A [Dialister micraerophilus DSM 19965] gi|327468173|gb|EGF13659.1| glucose inhibited division protein A [Dialister micraerophilus DSM 19965] Length = 624 Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust. Identities = 256/616 (41%), Positives = 381/616 (61%), Gaps = 8/616 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAGCEAA AA+LGA T L T + M CNPAIGG GK HLV+EIDA Sbjct: 6 TYDVIVVGAGHAGCEAALAAARLGARTLLFTISLENVAMMPCNPAIGGPGKSHLVKEIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG AD IQ R+LN+ KGPAV R Q+D+ Y + + + +NL++ Q ++ Sbjct: 66 LGGQMGIAADETAIQMRMLNLGKGPAVYALRAQSDKGAYHRYFKSILENTDNLELKQAQI 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ + + + R V+L TGT+L I +G+ G G PS L Sbjct: 126 MDIVVEDGKCKGVITEFDEIYRSKAVILCTGTYLDSRIIVGEYMYTGGPNGMRPSVGLSE 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + K D R KTGTP+R+DG+++ +D + + D+ FSF++++ +C ++ Sbjct: 186 NLKKHGIDILRFKTGTPSRVDGRSLNYDHMKLEEGDKANHAFSFLSERKDRNIKDCYLSY 245 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH+I+ +N+ S IYSG I G RYCPSIEDK+VRF +++ HQ+F+EPEGL+T Sbjct: 246 TNENTHKILRDNLHRSPIYSGKIHGVGARYCPSIEDKVVRFADKDKHQLFVEPEGLDTTE 305 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+ST++P ++Q+ F++TIPG E V ++RP YAIEYD ++P +L+PTLE K+ GL+ Sbjct: 306 MYVQGMSTSMPIDVQYAFLKTIPGFENVKVMRPAYAIEYDLLDPLQLYPTLEVIKMEGLY 365 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ NGT+GYEEAAAQGL+AGIN+A K + +R ++YIG +IDDL +KG EPY Sbjct: 366 SAGQSNGTSGYEEAAAQGLMAGINAALKIQGKEPFILARHEAYIGTLIDDLVTKGTNEPY 425 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSR+EYR+ LR DNAD RLT G K+G + E R K F + +++ + + T Sbjct: 426 RMMTSRSEYRLILRQDNADLRLTEKGYKIGLVNEERYKHFIERKRKFEEAMDYITTKRFT 485 Query: 485 SKNLSSTSISFKQDGKTRT-----AYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 K + + ++ G T A + L P+ + +++ ++F + +E ++I Sbjct: 486 PK--EDVNKALEELGTTPLTTGIGADKILKRPEITYKDMVEKL-GCKEFDAEAVEEMEIT 542 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ K+ + E + IP+D D+ L +S E ++KL+ +KP +L QAS+I Sbjct: 543 VKYEGYITRQENAIKKAEKMENKKIPQDMDFMKLEGISIEARQKLTKIKPLSLGQASRIS 602 Query: 600 GMTPAALNLLLIYIKK 615 G++PA + +L++Y+KK Sbjct: 603 GVSPADIAILMVYVKK 618 >gi|313665756|ref|YP_004047627.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Mycoplasma leachii PG50] gi|312949569|gb|ADR24165.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Mycoplasma leachii PG50] Length = 629 Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust. Identities = 255/620 (41%), Positives = 376/620 (60%), Gaps = 12/620 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+GGGHAG EAA +A+L TALI I +M CNP++GG KG +VREIDA Sbjct: 4 NYDVIVVGGGHAGVEAALASARLNKKTALINLYEDKIATMPCNPSVGGPAKGIVVREIDA 63 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ ADA +Q ++LN +GP V R Q+D+E Y M+ I QENLD+I Sbjct: 64 LGGEMGKAADATALQTKLLNSSRGPGVWALRVQSDKEEYSKYMRNVIKKQENLDLITKAC 123 Query: 125 AG--FNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 G ++ KN+ + I ++D + V++TTGT+L+ I G + +G + + + Sbjct: 124 TGLVYDDSKNV-TGIYLEDQITLNAKVVIITTGTYLKSEILKGVDRYESGPNNEKTTKGI 182 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--NRQIEC 240 S + R KTGTPAR+ ++ + + + + FSF T+ T +Q C Sbjct: 183 SKSLIDLGIKLMRFKTGTPARVYRDSVDLSRATIEPGTDMKLAFSFSTNTYTPIEQQQPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 + + LET +II +N++ SA+YSG ++S GPRYCPS EDK+VRF E++ HQIF+EPE L Sbjct: 243 YLIHSTLETKKIIQDNLEKSAMYSGTVESIGPRYCPSFEDKVVRFKEKDTHQIFIEPETL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 N D Y G ST++P E+Q ++++PG E V + YAIEYD I+P +L P+LE K + Sbjct: 303 NGDTWYVQGFSTSMPIEVQELMLKSLPGFENVRVKHWAYAIEYDCIDPMQLSPSLELKDV 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 LF AGQINGT+GYEEAA QGL+AGIN++RK + LD I R ++YIGVMIDDL +KGV Sbjct: 363 KNLFTAGQINGTSGYEEAAGQGLIAGINASRKIDGLDPIILRRDEAYIGVMIDDLINKGV 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYR+ TSRAE+R+ LR DNA+ RL G ++G I + + + Y++E LK Sbjct: 423 WEPYRLLTSRAEHRLLLRNDNAETRLKQYGKEIGLISDTEWEEYLSYVKEIEQAIKELKE 482 Query: 481 LVLTSKNLSSTSISFKQDGKTR---TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 + T K+ + ++ K+ + YE + P I L P ++ + ++ + Sbjct: 483 IRFTPKSQLAINLKNKKQADLSHGYSGYEIIKIPTVDINELIEFIPSLQRLKTNQLQSIV 542 Query: 538 IESSYAAYTGR--QMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 IE + Y + Q+++ K +K E K+ IP + +YS + L+ E K+KL ++P N+ QA Sbjct: 543 IEIRFEGYVKKECQLVD-KLVKLERKK-IPLNINYSKVDNLATEAKDKLEKIRPLNIGQA 600 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G+ PA + +LL Y+KK Sbjct: 601 SRITGVNPADIQMLLFYLKK 620 >gi|303234692|ref|ZP_07321320.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Finegoldia magna BVS033A4] gi|302494175|gb|EFL53953.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Finegoldia magna BVS033A4] Length = 627 Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust. Identities = 259/618 (41%), Positives = 374/618 (60%), Gaps = 13/618 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+V+G GHAGCEAA A+LG TA+++ ++ + CNP IGG GKGHLV+E+DAL Sbjct: 10 YDVVVVGAGHAGCEAALATARLGLKTAIMSISLDSVADLPCNPNIGGTGKGHLVKEVDAL 69 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG V D IQ R+LN KGPAV R QAD+ Y M+ + + ENLD+I+ EV Sbjct: 70 GGEMGLVIDKTYIQSRMLNTSKGPAVHSLRVQADKRKYHDEMKSVLENTENLDLIEAEVV 129 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E N I SI ++ V+L TGT+L+G++ +G+ +G G S L +S Sbjct: 130 DIGVEDNKIKSITTAQGAIFPTRAVILATGTYLKGLVMMGEYTYESGPHGMKSSKKLSDS 189 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KITNRQIECGIT 243 + R KTGTPAR+ ++ ++ Q D+ +IPFSF+ D I+ +Q C +T Sbjct: 190 LKNLGIELRRFKTGTPARVHRDSLNYEVMTVQPGDDDVIPFSFLNDGKDISKKQEHCYLT 249 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 T L+T +II +N++ S +Y+G +K GPRYCPSIEDKIVRF +R+ HQ+F+EPEGL+T Sbjct: 250 YTTLKTKQIIEDNLERSPMYAGIVKGVGPRYCPSIEDKIVRFPDRDEHQVFVEPEGLSTK 309 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G+S+ LPEE+Q + +TI G E V +R Y IEYD I+P L TLE +I+ L Sbjct: 310 EMYIQGVSSTLPEEVQKEMYKTIIGFENVRFMRSAYGIEYDCIDPTILKRTLEHLEINNL 369 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQING++GYEEAA QG++AGIN+A + R+D+YIGV+IDDL +KG EP Sbjct: 370 FFAGQINGSSGYEEAAGQGIIAGINAAMNLLGKEPFVLDRSDAYIGVLIDDLVTKGTNEP 429 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRM TSR EYR++LR DNAD RLT ++G + R ++ + + LKS+++ Sbjct: 430 YRMMTSRCEYRLTLRQDNADLRLTERAHEIGLATDERYEKMLHKKKTIDEEIERLKSIMV 489 Query: 484 TSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 T T+ ++ G + T + + P+ + D + + RLQ+ Sbjct: 490 TPT--EETNEKLRKLGSSELKTGITLLDLIKRPELTYDKTEEFDADRPELPRYL--RLQV 545 Query: 539 ES--SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 E+ Y Y +QM + K+ K E R + DY + LSNE +KL+ +KP +L QAS Sbjct: 546 ETHIKYEGYIAKQMSQIKQFKKLENRKLDMIEDYKEVMGLSNEAVQKLNDIKPESLGQAS 605 Query: 597 KIEGMTPAALNLLLIYIK 614 +I G++P+ +N+LLIY++ Sbjct: 606 RISGVSPSDINVLLIYME 623 >gi|227878342|ref|ZP_03996299.1| glucose-inhibited division protein A [Lactobacillus crispatus JV-V01] gi|256849609|ref|ZP_05555041.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Lactobacillus crispatus MV-1A-US] gi|312984012|ref|ZP_07791360.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus crispatus CTV-05] gi|227862078|gb|EEJ69640.1| glucose-inhibited division protein A [Lactobacillus crispatus JV-V01] gi|256713725|gb|EEU28714.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Lactobacillus crispatus MV-1A-US] gi|310894514|gb|EFQ43588.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus crispatus CTV-05] Length = 634 Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust. Identities = 264/617 (42%), Positives = 363/617 (58%), Gaps = 11/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAA +A +G T L+T + M CNP++GG KG +VREIDAL Sbjct: 12 YDVIVVGAGHAGCEAALASAHMGQKTLLVTIGLDMVAFMPCNPSVGGPAKGTVVREIDAL 71 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ DA IQ R+LN KGPAVR R QAD+ Y M+ I + NL + Q V Sbjct: 72 GGQMGKNIDATYIQMRMLNTGKGPAVRALRAQADKWQYHEHMKDTIENTPNLTLRQAIVD 131 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + ++ + +VVLTTGT RG I IG+L +G +PS L + Sbjct: 132 ELVVEDGVCKGVITNTGAKYHAKSVVLTTGTAARGKIIIGELTYSSGPNNTTPSIKLSEN 191 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 K F R KTGTP R++G TI + KTE++ D+ FS+ + + +QI C +T Sbjct: 192 LEKLGFKLRRFKTGTPPRVNGNTIDYSKTEEEPGDKIPRHFSYESRDEDYLQKQISCWMT 251 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II N+ + ++SG IK GPRYCPSIEDK+VRF +++ HQIFLEPEG T Sbjct: 252 YTNPTTHTIIRNNLDRAPMFSGIIKGVGPRYCPSIEDKVVRFADKDRHQIFLEPEGKTTK 311 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY ST++PEEIQ + I ++ GLE ++RPGYAIEYD + P +L TLETK + L Sbjct: 312 EVYVGDFSTSMPEEIQLKMIHSVAGLEHAEMMRPGYAIEYDVVEPWQLKHTLETKNVKHL 371 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ+NGT+GYEEAA QGL+AGIN+A + R D+YIGV+IDDL +KG EP Sbjct: 372 FTAGQMNGTSGYEEAAGQGLIAGINAALSAQDKPGFTLGRNDAYIGVLIDDLVTKGTNEP 431 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT G LG I + +RFA++ ++ + + L Sbjct: 432 YRLLTSRAEYRLILRNDNADLRLTEYGHDLGLISD---ERFARFEEKKHAIEDAKTRLHE 488 Query: 484 TSKNLSSTSISFKQD-GKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 + +L+ F Q G+ A FL P+ +I ++ + + V E+++ Sbjct: 489 ITVHLTDEVQEFLQSIGQEPMKAGVKADVFLRRPNVTIADIERLTGEKVPGDRYVKEQVE 548 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I YA Y ++ +K +E + IP D DY + L+ E ++K ++P L QA + Sbjct: 549 IGIKYAGYIKKEETRIARLKRQEAKKIPADIDYDQIEGLATEARQKFEKIRPETLAQAER 608 Query: 598 IEGMTPAALNLLLIYIK 614 I G+ PA L +L +YI+ Sbjct: 609 ISGVNPADLAILSVYIQ 625 >gi|256384192|gb|ACU78762.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Mycoplasma mycoides subsp. capri str. GM12] gi|256385024|gb|ACU79593.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Mycoplasma mycoides subsp. capri str. GM12] gi|296455448|gb|ADH21683.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [synthetic Mycoplasma mycoides JCVI-syn1.0] Length = 629 Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust. Identities = 257/621 (41%), Positives = 374/621 (60%), Gaps = 14/621 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+GGGHAG EAA +A+L TALI I +M CNP++GG KG +VREIDA Sbjct: 4 NYDVIVVGGGHAGVEAALASARLNKKTALINLYEDKIATMPCNPSVGGPAKGIVVREIDA 63 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M + ADA +Q ++LN +GP V R Q+D+E Y M+ I +Q+NLD+I Sbjct: 64 LGGEMAKAADATALQTKLLNSSRGPGVWALRVQSDKEEYSKYMRNVIKNQKNLDLITRAC 123 Query: 125 AGFNTEKN-IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 G + N ++ I + D +++ V++TTGT+L+ I G + +G + + + Sbjct: 124 TGLVYDDNKTVTGIYLDDQTILNAKAVIITTGTYLKSEILKGVDRYESGPNNEKTTKGIS 183 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--NRQIECG 241 S + R KTGTPAR+ ++ + + + FSF T+ T +Q C Sbjct: 184 KSLIDLGIKLMRFKTGTPARVYRDSVDLTNAVLEPGTDMKLAFSFSTNTYTPIEKQQPCY 243 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 + + LET +II +N++ SA+YSG ++S GPRYCPS EDK+VRF E++ HQIF+EPE LN Sbjct: 244 LIHSTLETKKIIEDNLEKSAMYSGTVESIGPRYCPSFEDKVVRFKEKDTHQIFIEPETLN 303 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 D Y G ST++P E+Q ++++PG E V + YAIEYD I+P +L P+LE K + Sbjct: 304 GDTWYVQGFSTSMPIEVQELMLKSLPGFENVRVKHWAYAIEYDCIDPMQLSPSLELKDVR 363 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 LF AGQINGT+GYEEAA QGL+AGIN++RK + LD I R ++YIGVMIDDL +KGV Sbjct: 364 NLFTAGQINGTSGYEEAAGQGLIAGINASRKIDGLDPIILRRDEAYIGVMIDDLVNKGVW 423 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAE+R+ LR DNA+ RL G ++G I ++ ++ Y+ E LK + Sbjct: 424 EPYRLLTSRAEHRLLLRNDNAETRLKQYGREIGLISDQEWNQYLIYVNEIEQAIKELKEI 483 Query: 482 VLTSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 T K S +I+ K + + YE + P I L P +K + ++ + Sbjct: 484 RFTPK--SQLAINLKNKNQADLSHGYSGYEIIKIPTVDINELIEFIPSLQKLKTNQLQSI 541 Query: 537 QIESSYAAYTG--RQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 IE + Y RQ+++ K +K E K+ IP D +YS + L+ E K+KL ++P N+ Q Sbjct: 542 VIEIRFEGYVKKERQLVD-KLVKLERKK-IPLDINYSKVDNLATEAKDKLEKIRPLNIGQ 599 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G+ PA + +LL Y+KK Sbjct: 600 ASRITGVNPADIQMLLFYLKK 620 >gi|262046277|ref|ZP_06019240.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus crispatus MV-3A-US] gi|260573607|gb|EEX30164.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus crispatus MV-3A-US] Length = 632 Score = 483 bits (1243), Expect = e-134, Method: Compositional matrix adjust. Identities = 264/617 (42%), Positives = 363/617 (58%), Gaps = 11/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAA +A +G T L+T + M CNP++GG KG +VREIDAL Sbjct: 10 YDVIVVGAGHAGCEAALASAHMGQKTLLVTIGLDMVAFMPCNPSVGGPAKGTVVREIDAL 69 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ DA IQ R+LN KGPAVR R QAD+ Y M+ I + NL + Q V Sbjct: 70 GGQMGKNIDATYIQMRMLNTGKGPAVRALRAQADKWQYHEHMKDTIENTPNLTLRQAIVD 129 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + ++ + +VVLTTGT RG I IG+L +G +PS L + Sbjct: 130 ELVVEDGVCKGVITNTGAKYHAKSVVLTTGTAARGKIIIGELTYSSGPNNTTPSIKLSEN 189 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 K F R KTGTP R++G TI + KTE++ D+ FS+ + + +QI C +T Sbjct: 190 LEKLGFKLRRFKTGTPPRVNGNTIDYSKTEEEPGDKIPRHFSYESRDEDYLQKQISCWMT 249 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II N+ + ++SG IK GPRYCPSIEDK+VRF +++ HQIFLEPEG T Sbjct: 250 YTNPTTHTIIRNNLDRAPMFSGIIKGVGPRYCPSIEDKVVRFADKDRHQIFLEPEGKTTK 309 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY ST++PEEIQ + I ++ GLE ++RPGYAIEYD + P +L TLETK + L Sbjct: 310 EVYVGDFSTSMPEEIQLKMIHSVAGLEHAEMMRPGYAIEYDVVEPWQLKHTLETKNVKHL 369 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ+NGT+GYEEAA QGL+AGIN+A + R D+YIGV+IDDL +KG EP Sbjct: 370 FTAGQMNGTSGYEEAAGQGLIAGINAALSAQDKPGFTLGRNDAYIGVLIDDLVTKGTNEP 429 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT G LG I + +RFA++ ++ + + L Sbjct: 430 YRLLTSRAEYRLILRNDNADLRLTEYGHDLGLISD---ERFARFEEKKHAIEDAKTRLHE 486 Query: 484 TSKNLSSTSISFKQD-GKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 + +L+ F Q G+ A FL P+ +I ++ + + V E+++ Sbjct: 487 ITVHLTDEVQEFLQSIGQEPMKAGVKADVFLRRPNVTIADIERLTGEKVPGDRYVKEQVE 546 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I YA Y ++ +K +E + IP D DY + L+ E ++K ++P L QA + Sbjct: 547 IGIKYAGYIKKEETRIARLKRQEAKKIPADIDYDQIEGLATEARQKFEKIRPETLAQAER 606 Query: 598 IEGMTPAALNLLLIYIK 614 I G+ PA L +L +YI+ Sbjct: 607 ISGVNPADLAILSVYIQ 623 >gi|225377578|ref|ZP_03754799.1| hypothetical protein ROSEINA2194_03228 [Roseburia inulinivorans DSM 16841] gi|225210554|gb|EEG92908.1| hypothetical protein ROSEINA2194_03228 [Roseburia inulinivorans DSM 16841] Length = 645 Score = 483 bits (1243), Expect = e-134, Method: Compositional matrix adjust. Identities = 258/620 (41%), Positives = 376/620 (60%), Gaps = 18/620 (2%) Query: 12 GGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGR 71 G GHAGCEAA A+LG T + T +I M CNP IGG KGHLVREIDAL G MG+ Sbjct: 19 GAGHAGCEAALACARLGLETIIFTVSVDSIAMMPCNPNIGGSSKGHLVREIDALGGEMGK 78 Query: 72 VADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEK 131 D IQ ++LN KGPAV R QAD+ Y + M++ + + ++L + Q EV+ TE Sbjct: 79 NIDKTFIQSKMLNKSKGPAVHSLRAQADKMNYSMEMRKTLQNTDHLTIRQAEVSEIITET 138 Query: 132 NII---------SSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 + + + ++ C VVL TGT+L G++ G G +N L Sbjct: 139 TALENGKEIQKMTGVKTFSGAVYHCKAVVLCTGTYLCARCLTGEMITYTGPNGLQAANHL 198 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIEC 240 +S + + R KTGTPAR+D +++ + K ++Q DER++PFSF T + + Q+ C Sbjct: 199 TDSLKEHGIEMFRFKTGTPARIDKRSVDFSKMQEQKGDERVVPFSFTTNPEDVQIDQVSC 258 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +T TN +TH II N+ S IY+G I+ GPRYCPSIEDK+V+F +++ HQIF+EPEG+ Sbjct: 259 WLTYTNEKTHEIIRNNLDRSPIYAGIIEGTGPRYCPSIEDKVVKFADKDRHQIFIEPEGI 318 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 NT+ +Y G+S++LPE++QH+ RT+PGLE V I+R YAIEYD INP +L+ TLE K I Sbjct: 319 NTNEMYVGGMSSSLPEDVQHEMYRTLPGLEHVKIVRNAYAIEYDCINPNQLYATLEFKNI 378 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF GQ NG++GYEEAA QGLVAGIN+A + + R+++YIGV+IDDL +K Sbjct: 379 KGLFSGGQFNGSSGYEEAACQGLVAGINAAMSILGKEPLILDRSEAYIGVLIDDLVTKEN 438 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFA-KYIQEYNFLRSLLK 479 EPYRM TSRAEYR+ LR DNAD RL+ G ++G I + R K + N + + Sbjct: 439 HEPYRMMTSRAEYRLLLRQDNADLRLSKKGYEIGLISQERYDWICQKEVLIQNEIERVAG 498 Query: 480 SLVLTSKNLSSTSISFK----QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIER 535 + +K + + S+ G T T E + P+ + L I + + V+E+ Sbjct: 499 VKIGANKEVQALLESYGSIPLNTGTTLT--ELIRRPELDYEKLAPIDKERPELPYDVVEQ 556 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 + I Y Y RQ+ + + K E + I +DFDY +P+L E ++KL + +P ++ QA Sbjct: 557 VNINIKYDGYIVRQIKQVEHYKKLENKKIAEDFDYDEVPSLRIEARQKLKLYRPLSIGQA 616 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G++PA +++LL+Y+++ Sbjct: 617 SRISGVSPADISVLLVYMEQ 636 >gi|146298764|ref|YP_001193355.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Flavobacterium johnsoniae UW101] gi|205831512|sp|A5FL86|MNMG_FLAJ1 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|146153182|gb|ABQ04036.1| glucose inhibited division protein A [Flavobacterium johnsoniae UW101] Length = 623 Score = 483 bits (1243), Expect = e-134, Method: Compositional matrix adjust. Identities = 274/625 (43%), Positives = 385/625 (61%), Gaps = 16/625 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M YDVIV+G GHAG EAAA AA LG+ T L+T I MSCNPA+GG+ KG +VR Sbjct: 1 MFLEEYDVIVVGAGHAGSEAAAAAANLGSKTLLVTMSLQNIAQMSCNPAMGGIAKGQIVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G G V+D IQF++LN KGPA+ PR Q+DR + + + NLD Sbjct: 61 EIDALGGYSGIVSDRTAIQFKMLNKSKGPAMWSPRVQSDRMRFAEEWRMMLEGTPNLDFY 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V G E I I IR +VVLT GTFL G+IHIG+ + GR G+S + Sbjct: 121 QEMVKGLIIENGKIKGIRTSLGVEIRSKSVVLTNGTFLNGLIHIGEKQFGGGRAGESAAT 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSF--MTDKITNRQI 238 + +K F+ GR+KTGTP R+DG+++ + K ++ D + FS+ +T +T +Q Sbjct: 181 GITEDLVKAGFEAGRMKTGTPPRVDGRSLDYSKMNEEKGDAKPDKFSYSDLTKPLT-QQR 239 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C +T T+L H I+ E S +++G IKS GPRYCPSIEDKI RF ++ HQ+F+EPE Sbjct: 240 SCYMTYTSLNVHDILREGFDRSPMFNGRIKSLGPRYCPSIEDKINRFADKERHQLFVEPE 299 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 G NT VY NG ST+LPE+IQ + +R++ G E V RPGYAIEYDY P +L TLETK Sbjct: 300 GWNTCEVYVNGFSTSLPEDIQFKALRSVAGFENVKFFRPGYAIEYDYFPPTQLKHTLETK 359 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 + GL+ AGQINGTTGYEEAA+QGL+AGIN+ K ++ + R ++YIGV+IDDL +K Sbjct: 360 LVEGLYFAGQINGTTGYEEAASQGLMAGINAHLKVHEKAPLILKRDEAYIGVLIDDLITK 419 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYRMFTSRAEYR LR DNAD RLTP+ ++G E R +R + E + + Sbjct: 420 GTEEPYRMFTSRAEYRTLLRQDNADFRLTPMSFEIGLASEDRMRRMEHKLNESEKMVAFF 479 Query: 479 K--SLVLTSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNL--FSICPDARKFSSL 531 K S+ + N + S Q K ++ S P ++++ F K ++L Sbjct: 480 KETSVTVAETNPILIEKESAPISQGDKM---FKVFSRPQIELEDMLKFEKVDSYIKENNL 536 Query: 532 ---VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 ++E+ I+ Y+ Y ++ A ++ E+ IP++FDY+ + ++S E K+KLS ++ Sbjct: 537 DEEIVEQAVIQVKYSGYIEKERNNADKLNRLEEVKIPENFDYNKIKSMSIEAKQKLSKIR 596 Query: 589 PFNLLQASKIEGMTPAALNLLLIYI 613 P + QAS+I G++P+ +++LLIY+ Sbjct: 597 PVTISQASRISGVSPSDISVLLIYM 621 >gi|295697831|ref|YP_003591069.1| glucose inhibited division protein A [Bacillus tusciae DSM 2912] gi|295413433|gb|ADG07925.1| glucose inhibited division protein A [Bacillus tusciae DSM 2912] Length = 628 Score = 483 bits (1243), Expect = e-134, Method: Compositional matrix adjust. Identities = 261/614 (42%), Positives = 368/614 (59%), Gaps = 8/614 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+V+G GHAG EAA AA+LG T L+T + M CNP++GG KG +VREIDAL Sbjct: 8 YDVVVVGAGHAGSEAALAAARLGCRTLLLTINVDAVAYMPCNPSVGGPAKGIVVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M R AD + IQ R+LN KGPAVR R QAD+ LY M+ + L + QG V Sbjct: 68 GGEMARNADRSHIQMRMLNTGKGPAVRALRAQADKVLYGRRMKEVLEYTPGLTLRQGLVE 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + + VVLTTGT+LRG + IG + +G G P+ +L ++ Sbjct: 128 EILVRGGRAVGVRTNTGAEYLAQAVVLTTGTYLRGRVIIGDVSYSSGPAGQMPALALSDN 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 F R KTGTP R++ ++I + K Q D++ + FS Q+ C +T T Sbjct: 188 LTDLGFQLVRFKTGTPPRVNRRSIDFTKLMVQPGDDQWLHFSHEERLPRRPQVPCWLTYT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N TH IIM+N+ + +YSG+IK GPRYCPSIEDK+VRF +R HQ+FLEPEGL T Sbjct: 248 NERTHAIIMDNLDRAPMYSGEIKGRGPRYCPSIEDKVVRFSDRPAHQVFLEPEGLFTAEW 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+ST+LPE+IQ + + TI GLE I+RPGYAIEYD + P +L+PTLETK + GLF Sbjct: 308 YVQGMSTSLPEDIQVEMLHTIRGLENAEILRPGYAIEYDALVPTQLWPTLETKAVPGLFT 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGT+GYEEAA QG++AGIN+A K + + SR + YIGVMIDDL +KG EPYR Sbjct: 368 AGQINGTSGYEEAAGQGIIAGINAALKVLGREPLVLSRAEGYIGVMIDDLVTKGTNEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 + TSRAE+R+ LR DNAD RL G +LG + ER +R K + L + Sbjct: 428 LLTSRAEHRLLLRHDNADLRLMEKGYRLGLVPEREYERLLKKRERIEEELDRLSGTRVRG 487 Query: 486 KNLSSTSISFKQDGKTRTAY-----EFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 +++ S ++ G + + L P+ + ++ P V+E+++I Sbjct: 488 EDVESL---LRERGSAPVSGSVALDQLLRRPELDYSLVQAVAPPREALDPEVVEQVEIAV 544 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 YA Y ++ + ++ E++ IP+ DY + LS+E +EKLS+++P ++ QAS+I G Sbjct: 545 KYAGYMAKEQQTIEHMRKMEEKRIPEGLDYGKVRGLSHEGREKLSLVQPRSVGQASRISG 604 Query: 601 MTPAALNLLLIYIK 614 ++PA + +LL+Y++ Sbjct: 605 VSPADIAILLVYLE 618 >gi|331703909|ref|YP_004400596.1| tRNA uridine 5 carboxymethylaminomethyl modification enzyme [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328802464|emb|CBW54619.1| tRNA uridine 5 carboxymethylaminomethyl modification enzyme [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 629 Score = 483 bits (1243), Expect = e-134, Method: Compositional matrix adjust. Identities = 257/621 (41%), Positives = 375/621 (60%), Gaps = 14/621 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+GGGHAG EAA +A+L TALI I +M CNP++GG KG +VREIDA Sbjct: 4 NYDVIVVGGGHAGVEAALASARLNKKTALINLYEDKIATMPCNPSVGGPAKGIVVREIDA 63 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M + ADA +Q ++LN +GP V R Q+D+E Y M+ I +Q+NLD+I Sbjct: 64 LGGEMAKAADATALQTKLLNSSRGPGVWALRVQSDKEEYSKYMRNVIKNQKNLDLITRAC 123 Query: 125 AGFNTEKN-IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 G ++N ++ I + D +++ V++TTGT+L+ I G + +G + + + Sbjct: 124 TGLVYDENKTVTGIYLDDQTILNAKAVIITTGTYLKSEILKGVDRYESGPNNEKTTKGIS 183 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--NRQIECG 241 S + R KTGTPAR+ ++ + + + FSF T+ T +Q C Sbjct: 184 KSLIDLGIKLMRFKTGTPARVYRDSVDLTNAVLEPGTDMKLAFSFSTNTYTPIEQQQLCY 243 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 + + LET +II +N++ SA+YSG ++S GPRYCPS EDK+VRF E++ HQIF+EPE LN Sbjct: 244 LIHSTLETKKIIEDNLEKSAMYSGTVESIGPRYCPSFEDKVVRFKEKDTHQIFIEPETLN 303 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 D Y G ST++P E+Q ++++PG E V + YAIEYD I+P +L P+LE K + Sbjct: 304 GDTWYVQGFSTSMPIEVQELMLKSLPGFENVRVKHWAYAIEYDCIDPMQLSPSLELKDVK 363 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 LF AGQINGT+GYEEAA QGL+AGIN++RK + LD I R ++YIGVMIDDL +KGV Sbjct: 364 NLFTAGQINGTSGYEEAAGQGLIAGINASRKIDGLDPIILRRDEAYIGVMIDDLINKGVW 423 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAE+R+ LR DNA+ RL G ++G I + ++ Y++E LK + Sbjct: 424 EPYRLLTSRAEHRLLLRNDNAETRLKQYGREIGLISDHEWNQYLIYVKEIEQAIKELKEI 483 Query: 482 VLTSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 T K S +I+ K + + YE + P I L P +K + ++ + Sbjct: 484 RFTPK--SQLAINLKNKNQADLSHGYSGYEIIKIPTVDINELIEFIPSLQKLKTNQLQSI 541 Query: 537 QIESSYAAYTG--RQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 IE + Y RQ+++ K +K E K+ IP D +YS + L+ E K+KL ++P N+ Q Sbjct: 542 VIEIRFEGYVKKERQLVD-KLVKLERKK-IPLDINYSKVDNLATEAKDKLEKIRPLNIGQ 599 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G+ PA + +LL Y+KK Sbjct: 600 ASRITGVNPADIQMLLFYLKK 620 >gi|301320718|gb|ADK69361.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 629 Score = 483 bits (1243), Expect = e-134, Method: Compositional matrix adjust. Identities = 257/621 (41%), Positives = 374/621 (60%), Gaps = 14/621 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+GGGHAG EAA +A+L TALI I +M CNP++GG KG +VREIDA Sbjct: 4 NYDVIVVGGGHAGVEAALASARLNKKTALINLYEDKIATMPCNPSVGGPAKGIVVREIDA 63 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M + ADA +Q ++LN +GP V R Q+D+E Y M+ I +Q+NLD+I Sbjct: 64 LGGEMAKAADATALQTKLLNSSRGPGVWALRVQSDKEEYSKYMRNVIKNQKNLDLITRAC 123 Query: 125 AGFNTEKN-IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 G ++N ++ I + D +++ V++TTGT+L+ I G + +G + + + Sbjct: 124 TGLVYDENKTVTGIYLDDQTILNAKAVIITTGTYLKSEILKGVDRYESGPNNEKTTKGIS 183 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--NRQIECG 241 S + R KTGTPAR+ ++ + + + FSF T T +Q C Sbjct: 184 QSLIDLGIKLMRFKTGTPARVYRDSVDLSNAVLEPGTDMKLAFSFSTSTYTPIEKQQPCY 243 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 + + LET +II +N++ SA+YSG ++S GPRYCPS EDK VRF E++ HQIF+EPE LN Sbjct: 244 LIHSTLETKKIIEDNLEKSAMYSGTVESIGPRYCPSFEDKAVRFREKDTHQIFIEPETLN 303 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 D Y G ST++P E+Q ++++PG E V + YAIEYD I+P +L P+LE K + Sbjct: 304 GDTWYVQGFSTSMPIEVQEMMLKSLPGFENVRVKHWAYAIEYDCIDPMQLSPSLELKDVK 363 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 LF AGQINGT+GYEEAA QGL+AGIN++RK + LD I R ++YIGVMIDDL +KGV Sbjct: 364 NLFTAGQINGTSGYEEAAGQGLIAGINASRKIDGLDPIILRRDEAYIGVMIDDLINKGVW 423 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAE+R+ LR DNA+ RL G ++G I ++ ++ Y++E LK + Sbjct: 424 EPYRLLTSRAEHRLLLRNDNAETRLKQYGKEIGLISDQEWNQYLIYVKEIEQAIKELKEI 483 Query: 482 VLTSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 T K S +I+ K + + YE + P I L P +K + ++ + Sbjct: 484 RFTPK--SQLAINLKNKNQADLSHGYSGYEIIKIPTVDINELIEFIPSLQKLKTNQLQSI 541 Query: 537 QIESSYAAYTG--RQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 IE + Y RQ+++ K +K E K+ IP D +YS + L+ E K+KL ++P N+ Q Sbjct: 542 VIEIRFEGYVKKERQLVD-KLVKLERKK-IPLDINYSKVDNLATEAKDKLEKIRPLNIGQ 599 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G+ PA + +LL Y+KK Sbjct: 600 ASRITGVNPADIQMLLFYLKK 620 >gi|302510603|ref|XP_003017253.1| hypothetical protein ARB_04131 [Arthroderma benhamiae CBS 112371] gi|291180824|gb|EFE36608.1| hypothetical protein ARB_04131 [Arthroderma benhamiae CBS 112371] Length = 605 Score = 483 bits (1243), Expect = e-134, Method: Compositional matrix adjust. Identities = 252/579 (43%), Positives = 353/579 (60%), Gaps = 23/579 (3%) Query: 58 LVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENL 117 ++REIDALDG+ GR D AGIQFR+LN KGPAV GPR Q DR LY+ M E+ + L Sbjct: 1 MIREIDALDGVAGRTVDKAGIQFRILNRSKGPAVWGPRAQIDRALYKKYMLEELSNTPGL 60 Query: 118 DVIQGEVA----------GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKL 167 +++G+VA N + I + ++ MI V++TTGTFL G IHIG Sbjct: 61 SIVEGKVADIVISKENIPSLNGSQGEIVGVKLESGEMIPTQKVIITTGTFLGGEIHIGLD 120 Query: 168 KIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFS 227 P+GRMG++ + L S + F GRLKTGTP RLD KTI + E Q D PFS Sbjct: 121 VFPSGRMGEAATFGLSKSLREAGFQLGRLKTGTPPRLDRKTIDFSTLEVQPGDSPPSPFS 180 Query: 228 FMTDKIT---NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVR 284 ++ D + Q+ C TN +H ++ EN+ S + GPRYCPS+E KI+R Sbjct: 181 YLNDSVQIGDKGQLNCWAAHTNEASHAVVRENLNKSIHIRETVN--GPRYCPSLESKIIR 238 Query: 285 FGERNGHQIFLEPEGLN-TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEY 343 F ++ H I+LEPEGL DV+YPNGIS +P + Q + +RT+ GLE V +++PGY +EY Sbjct: 239 FKDKPRHMIWLEPEGLAPNDVIYPNGISMTIPADAQEKMLRTVRGLENVTMLQPGYGVEY 298 Query: 344 DYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSR 403 DY++P+ L PTLETK ISGL+LAGQINGTTGYEEAAAQG++AGIN+ S + SR Sbjct: 299 DYVDPRSLRPTLETKLISGLYLAGQINGTTGYEEAAAQGIIAGINAGLASQSKPPMTLSR 358 Query: 404 TDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKR 463 D +IG+MIDDL +KGV EPYRMFT+R+EYRIS R DNAD RLT G G + ++R ++ Sbjct: 359 ADGFIGIMIDDLITKGVSEPYRMFTTRSEYRISTRSDNADLRLTAKGRAAGVVSDKRWRQ 418 Query: 464 FAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICP 523 F + ++ ++L++LL++ S S + D R+A+E LS+ S+ ++ Sbjct: 419 FNETKEQMSYLQALLENTKYPSTVWSRKGFPVRTDSSVRSAFELLSHNGVSLDDVIPHIE 478 Query: 524 DA-------RKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPAL 576 A FS + R+ IE YA YT RQ A + +E L+P D DYS++ L Sbjct: 479 SAPGTIHSLSSFSPEIKSRMAIEGRYAPYTKRQEATALLFERDEGMLLPPDIDYSTMLGL 538 Query: 577 SNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 S E ++ L ++P ++ A ++EG+TP LL++++K Sbjct: 539 STEERQVLEKVRPVSIGMARRVEGVTPVGALKLLMHVRK 577 >gi|41058576|gb|AAR99272.1| glucose-inhibited division protein A [Candidatus Blochmannia chromaiodes] Length = 594 Score = 483 bits (1243), Expect = e-134, Method: Compositional matrix adjust. Identities = 278/587 (47%), Positives = 365/587 (62%), Gaps = 15/587 (2%) Query: 40 TIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQAD 99 T+G MSCNPA+GG+GKGHLV+EIDA+ G M D +GIQFRVLN KG AVR R QAD Sbjct: 3 TLGQMSCNPAVGGIGKGHLVKEIDAMGGSMAYAIDQSGIQFRVLNSSKGAAVRATRAQAD 62 Query: 100 RELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSM-IRCSTVVLTTGTFL 158 + LYR A++ + Q+ L VIQ V N I ++ M ++VVLTTGTFL Sbjct: 63 KILYRQAIRSILEYQKFLLVIQASVEDLIVSGNKIVGVITPKLGMKFSGTSVVLTTGTFL 122 Query: 159 RGVIHIGKLKIPAGRMGDSPSNSLFNSFMK-FDFDTGRLKTGTPARLDGKTIIWDKTEKQ 217 G IHIG GR GDS S+SL + +K RLKTGT R+ K I + Q Sbjct: 123 NGKIHIGMNNFRGGRSGDSESSSLLSERLKELSLQISRLKTGTSPRVHTKGINFGSLRAQ 182 Query: 218 FADERLIPFSFM-TDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCP 276 ++D+ + FSF+ + K+ Q+ C IT TN +TH I+ N+ S +Y+G IK PRYCP Sbjct: 183 YSDDPIPVFSFIGSTKLHPTQVPCYITHTNNKTHEIVRSNLYQSPMYTGLIKGIAPRYCP 242 Query: 277 SIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIR 336 SIEDKI RF +RN HQIFLEPEGL T VY NGIST+LP +Q Q I++I GLE IIR Sbjct: 243 SIEDKITRFSDRNAHQIFLEPEGLTTPEVYLNGISTSLPFCVQMQMIKSIQGLENACIIR 302 Query: 337 PGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKL 396 PGYAIEYD+ +P++L TLE+K ISGLF +GQINGTTGYEEAAAQGL+AGIN+AR S Sbjct: 303 PGYAIEYDFFDPRDLKLTLESKIISGLFFSGQINGTTGYEEAAAQGLLAGINAARFSQNK 362 Query: 397 DCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCI 456 + R +Y+GV++DDL + G EPYRMFTSRAEYR+SLR DNAD RLT I +LG I Sbjct: 363 EGWYPRRDQAYLGVLVDDLCTHGTEEPYRMFTSRAEYRLSLREDNADLRLTEIARQLGLI 422 Query: 457 GERRQKRFAKYIQEYNFLRSLLK--------SLVLTSKNLSSTSISFKQDGKTRTAYEFL 508 E R K F + R L+ S V N T ++ + +G+ + Sbjct: 423 DESRWKAFCCKRENIEKERQRLRNTYIFPYSSDVAQLNNFLKTPLTHETNGEDLLRRPEI 482 Query: 509 SYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDF 568 +Y S + FS R+ V E+++I+ Y Y Q E K + E L+P D Sbjct: 483 NYKKLSQLSTFSPSILDRQ----VFEQIEIQIKYEGYIRHQQEEIKRHIYNENTLLPTDI 538 Query: 569 DYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 D++ + LS E+ +KL+ KP+++ QAS+I G+TPAA++ LL+++KK Sbjct: 539 DFNIVSGLSQEVIDKLNNYKPYSIGQASRISGITPAAISNLLVWLKK 585 >gi|205356211|ref|ZP_03222977.1| glucose inhibited division protein A [Campylobacter jejuni subsp. jejuni CG8421] gi|205345816|gb|EDZ32453.1| glucose inhibited division protein A [Campylobacter jejuni subsp. jejuni CG8421] Length = 619 Score = 483 bits (1243), Expect = e-134, Method: Compositional matrix adjust. Identities = 270/618 (43%), Positives = 368/618 (59%), Gaps = 15/618 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EA+A AA++G T L+T IG+ SCNPAIGGL KGHLV+E+DA+ Sbjct: 2 FDVIVIGGGHAGVEASAAAARMGKKTLLLTTLIEQIGAASCNPAIGGLAKGHLVKELDAM 61 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLMG + D AGIQFR+LN KG AV+G R Q D + YR+ + ++L NL++ Q + + Sbjct: 62 GGLMGEITDEAGIQFRILNESKGVAVQGSRAQIDMDKYRIIARNKLLKLPNLEISQEQAS 121 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + + V+LTTGTFL G+IH+G+ K+ AGR+G+ S +L N Sbjct: 122 VLIVENDEVKGVKTNLENTYFAKKVILTTGTFLNGLIHVGENKLQAGRVGELASVNLGNY 181 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 GRLKTGT R+D K+I + E Q D FSF + Q+ C I RT Sbjct: 182 LQTLGLKMGRLKTGTCPRVDAKSIDFSVLEIQDGDVNPKAFSFRSRNFNPTQLPCYIART 241 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N TH II N + +++G I+ GPRYCPSIEDKI RF ++ H +F+EP+ ++ Sbjct: 242 NTTTHEIIKNNFYRAPLFTGQIEGVGPRYCPSIEDKINRFSDKESHHLFIEPQTIDATEY 301 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG ST+LP E+Q Q + ++ G E I R GYAIEYDYI P EL TLE KKI L+ Sbjct: 302 YINGFSTSLPYEVQTQMLHSVNGFENAKITRFGYAIEYDYIEPTELKHTLELKKIKNLYC 361 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAAAQG +AGIN++ + + + R ++YIGV+IDDL KG EPYR Sbjct: 362 AGQINGTTGYEEAAAQGFMAGINASLSIDMKEPLILRRDEAYIGVLIDDLVVKGTKEPYR 421 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL-VLT 484 MFTSRAE+R+ LR +NA RL G LG + E+ YIQ N +L K L L Sbjct: 422 MFTSRAEFRLLLREENAILRLGKYGYGLGLLSEQD----FTYIQ--NIANNLQKGLEFLL 475 Query: 485 SKNLSST--------SISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 SK + S+ + + ++ F I+ L + P + + Sbjct: 476 SKEFTPNNQNNAFLESLGEDKISSIVNLQKIVARASFDIEKLKKLDPIFETMDHYSLREI 535 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 E+ Y Y Q + +++K + IP++FD+ S+ LSNE+ EKL+ KP + AS Sbjct: 536 LNEAKYYHYISMQKAQVEKMKNLSELKIPENFDFKSVSGLSNEVVEKLNHHKPPTIFAAS 595 Query: 597 KIEGMTPAALNLLLIYIK 614 +I G+TPAAL++L IYIK Sbjct: 596 QISGITPAALDILQIYIK 613 >gi|154250326|ref|YP_001411151.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Fervidobacterium nodosum Rt17-B1] gi|205831510|sp|A7HNL1|MNMG_FERNB RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|154154262|gb|ABS61494.1| glucose inhibited division protein A [Fervidobacterium nodosum Rt17-B1] Length = 626 Score = 483 bits (1243), Expect = e-134, Method: Compositional matrix adjust. Identities = 283/621 (45%), Positives = 376/621 (60%), Gaps = 19/621 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIV+GGGHAG EAA +A++G T LIT IG SCNPAIGG KG +VREIDAL Sbjct: 13 FEVIVVGGGHAGIEAAFASARMGFKTLLITGNPDNIGWASCNPAIGGSAKGIVVREIDAL 72 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + D I R+LN KGPAV+ R Q D+ Y M+R++ QENL + G V Sbjct: 73 GGEMAKTTDETMINVRMLNTSKGPAVQALRAQIDKYSYSRTMKRKLEEQENLLIRYGIVE 132 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + +V V+LTTGTFLRG I IG+ + AGRMGD + L NS Sbjct: 133 EILVENGKVKGVVDSFGIDYMAKAVILTTGTFLRGKIFIGRETMEAGRMGDFSARGLTNS 192 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFS-FMTDKITNRQIECGITR 244 +K F GR KTGTPAR+ K+I + K +Q D++ FS F K+ + C +T Sbjct: 193 LIKLGFTVGRFKTGTPARVLKKSIDFSKMVRQDTDDKPWAFSHFNEPKVLEKDYPCWLTH 252 Query: 245 TNLETHRIIMENIKHSAIYSGDIK---SYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 T E+H+II + + S +Y G++K + GPRYCPSIEDK+V+F ER HQIF+EPEG + Sbjct: 253 TTPESHKIIRDYLIFSPLY-GEVKLIQAKGPRYCPSIEDKVVKF-ERESHQIFVEPEGKD 310 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T Y NG+ST+LP Q + +RTIPGLE V I+RP YA+EYDYI+P +L+PTLE+K I Sbjct: 311 TQEYYLNGLSTSLPYAAQIKMLRTIPGLENVKIVRPAYAVEYDYIDPTQLYPTLESKIIE 370 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 L+ AGQINGT+GYEEAAAQGL+AGIN+ K I R++SYIGVMIDDL +KGV Sbjct: 371 NLYFAGQINGTSGYEEAAAQGLIAGINAGLKLRGEKPIVLKRSESYIGVMIDDLVTKGVD 430 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ +SRAEYR+ LR DNA RL G ++G I + + K I N ++ ++ L Sbjct: 431 EPYRLLSSRAEYRLLLRHDNAHLRLAKYGYQVGLIP---RWFYDKIINLENNIKYHIERL 487 Query: 482 VLTSKNLSSTSISFKQDGKTRTAYE------FLSYPDFSIQNLFSICPDARKFSSLVIER 535 SS+ Q T E L P+ S L + P+ + VIE+ Sbjct: 488 ENVKVPASSSVNELLQSLGTTPLTEGTRLAKLLRRPEVSYNALKHLDPEPISDTD-VIEQ 546 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIP-KDFDYSSLPALSNELKEKLSILKPFNLLQ 594 ++I+ Y Y M+E +I FEE +P + +S +P LS E +EKL +KP ++ Q Sbjct: 547 IEIQLKYEGYIN-SMLEQVQI-FEEYENLPIVNVIFSEVPNLSTEAREKLEKIKPLSIGQ 604 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G+TPA + LL YIKK Sbjct: 605 ASRIPGVTPADILALLTYIKK 625 >gi|194467397|ref|ZP_03073384.1| glucose inhibited division protein A [Lactobacillus reuteri 100-23] gi|194454433|gb|EDX43330.1| glucose inhibited division protein A [Lactobacillus reuteri 100-23] Length = 647 Score = 483 bits (1242), Expect = e-134, Method: Compositional matrix adjust. Identities = 267/623 (42%), Positives = 372/623 (59%), Gaps = 15/623 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+G GHAG EAA AA++G T L+T + M CNP++GG KG +VREIDA Sbjct: 19 SYDVIVVGAGHAGSEAALAAARMGNKTLLVTINLEMVAFMPCNPSVGGPAKGIVVREIDA 78 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG D +Q R+LN KGPAVR R QAD+ Y AM++ I + NL + Q V Sbjct: 79 LGGEMGHNIDKTYVQMRMLNTGKGPAVRALRAQADKHAYHRAMKQTIEEEPNLTLRQATV 138 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ + TVVLT GT RG I IG+L+ +G + L Sbjct: 139 DQLIVEDGVCKGVITNTGARYHAKTVVLTVGTAARGKIIIGELQYESGPNNSKSAVKLSE 198 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT----NRQIEC 240 + + FD R KTGTP R++GKTI + TE+Q DE FSF T + Q+ C Sbjct: 199 NLEELGFDLERFKTGTPPRVNGKTIDYSVTEEQPGDEEPHHFSFDTPDSAYIPISEQLSC 258 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +T TN TH II EN+ + ++SG IK GPRYCPSIEDK+VRF ++ HQ+FLEPEG Sbjct: 259 WLTYTNEGTHAIIRENLSRAPMFSGVIKGVGPRYCPSIEDKVVRFADKPRHQVFLEPEGR 318 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 +TD Y +GIST++PEEIQ + + +I GLE ++RPGYAIEYD + P +L PTLETK I Sbjct: 319 DTDEYYLDGISTSMPEEIQQKIVHSIKGLENAEMMRPGYAIEYDVVAPYQLHPTLETKII 378 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 L+ AGQ NG++GYEEAA QGL+AGIN+ ++ + R+D+YIGVMIDDL +KG Sbjct: 379 KNLYTAGQTNGSSGYEEAAGQGLIAGINAGLRAQGKEPFVLKRSDAYIGVMIDDLVTKGT 438 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYR+ TSRAEYR+ LR DNAD RL +G +G + + +R AK ++ + + +K Sbjct: 439 KEPYRLLTSRAEYRLILRHDNADFRLMEMGHNVGLVSD---ERLAKMEEKKRQVAAEIKR 495 Query: 481 LVLTSKNLSSTSIS--FKQDGKTR-----TAYEFLSYPDFSIQNLFSICP-DARKFSSLV 532 L S ++ + G R A + L P F Q L P ++ V Sbjct: 496 LEEIKLKPSDDKVNEFIEAHGDNRLKDGIAAADLLKRPYFDYQTLAEFIPVPEQELDRHV 555 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 IE+++I+ YA Y ++ ++ + +K E + IP D DY + L+ E ++KL ++P L Sbjct: 556 IEQVEIQLKYAGYIKKEEVKVERMKRMEAKRIPDDIDYGDIDGLATEGRQKLEKIRPETL 615 Query: 593 LQASKIEGMTPAALNLLLIYIKK 615 QAS+I G+ PA + +L +Y+++ Sbjct: 616 AQASRISGVNPADIAILSVYVRQ 638 >gi|288925946|ref|ZP_06419876.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prevotella buccae D17] gi|288337370|gb|EFC75726.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prevotella buccae D17] Length = 623 Score = 483 bits (1242), Expect = e-134, Method: Compositional matrix adjust. Identities = 262/622 (42%), Positives = 371/622 (59%), Gaps = 15/622 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAGCEAA AA +GA T LIT + I MSCNPA+GG+ KG +VREIDAL Sbjct: 5 YDVIVIGGGHAGCEAATAAAHMGAHTCLITMDMNKIAQMSCNPAVGGIAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG V D IQFR+LN+ KGPAV PR Q DR + + + +NLDV Q + Sbjct: 65 GGQMGLVTDNTAIQFRMLNIGKGPAVWSPRAQCDRGKFIWEWRTMLDRTDNLDVWQDQAD 124 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + R +V++T GTFL G++H+G+ KI GR + + S Sbjct: 125 ELIVENGEAVGVTTIWGVEFRAKSVIVTAGTFLNGLMHVGRHKIEGGRCAEPAVHYFTES 184 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + + R+KTGTP R+D +++ ++ E Q D FS+M + +Q+ C T Sbjct: 185 ITRHGIVSARMKTGTPVRIDKRSVHFEDMEIQQGDSGFHRFSYMGQERKLKQLPCWTCYT 244 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N E H ++ + S +++G I+S GPRYCPSIE K+V F +++ H +FLEPEG NT+ + Sbjct: 245 NGEVHEVLKGGLADSPLFNGQIQSTGPRYCPSIETKLVTFPDKDQHPLFLEPEGENTNEM 304 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG S+++P +IQ + I IP L I RPGYAIEYDY +P +L +LE+K +SGLF Sbjct: 305 YLNGFSSSMPLDIQLEAIHKIPALRDAKIYRPGYAIEYDYFDPTQLKHSLESKILSGLFF 364 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ+NGTTGYEEA QGLVAG+N+A N + +R +SYIGV+IDDLT+KGV EPYR Sbjct: 365 AGQVNGTTGYEEAGGQGLVAGVNAAIHCNGGEPFVMNRDESYIGVLIDDLTTKGVDEPYR 424 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAEYRI LR D+AD+RLT LG I R KR+ ++++ + ++ T Sbjct: 425 MFTSRAEYRILLRQDDADSRLTEKAYNLG-IATR--KRYDWWLEKKEAIERIISFCEDTP 481 Query: 486 KNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKF-------SSLVI 533 N + + G T + ++ P+ ++QNL I P ++ + Sbjct: 482 INKEHINPQLEALGTTPLRAGCKLVDLVTRPNLTLQNLSEIIPSLKEILESPKNRKEEIT 541 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E +I+ Y Y R+ I A ++ E I FDY++L +S E ++KLS ++P L Sbjct: 542 EAAEIKMKYKGYIDRERIVADKMHRLENIKIKGRFDYATLHEISTEGRQKLSSIEPETLA 601 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I G++P+ +N+LL+ + + Sbjct: 602 QASRIPGVSPSDINVLLVLLGR 623 >gi|332299652|ref|YP_004441573.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Porphyromonas asaccharolytica DSM 20707] gi|332176715|gb|AEE12405.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Porphyromonas asaccharolytica DSM 20707] Length = 638 Score = 483 bits (1242), Expect = e-134, Method: Compositional matrix adjust. Identities = 268/627 (42%), Positives = 376/627 (59%), Gaps = 23/627 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D+IVIG GHAGCEAA A++GAST LIT + + +SCNPA+GG+ KG +VREIDAL Sbjct: 18 FDIIVIGAGHAGCEAACATARMGASTLLITGDMNKVAQLSCNPAMGGIAKGQIVREIDAL 77 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADR----ELYRLAMQREILSQENLDVIQ 121 G G+++DAA IQ+R+LN KGPA+ PR Q DR EL+R + R + LD+ Q Sbjct: 78 SGYTGQMSDAATIQWRMLNRSKGPAMWSPRAQLDRMRFMELWRGQLDR----TDGLDLWQ 133 Query: 122 GEVAG--FNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 V F E N +V Q + VVLT GTFL G++H GK IP GR+ + S Sbjct: 134 DFVVDIKFGAEDNK-HLVVTQLGMTFTAAKVVLTAGTFLGGLMHFGKTMIPGGRISEPAS 192 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQI 238 + + + R+KTGTPAR+DG+++ W E+Q DE FSF+ + + RQ Sbjct: 193 HGITECLVAAGHHADRMKTGTPARIDGRSVDWSLVEEQPGDEEAGRFSFLPMQRSQLRQR 252 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C I TN H I+ ++ S +Y+G I+S GPRYCPSIE KIV F +R HQ+FLEPE Sbjct: 253 SCYILYTNEACHDILRASLSDSPLYNGQIQSIGPRYCPSIETKIVNFADRTRHQLFLEPE 312 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 G T+ Y NG S++LP +IQ + ++TIP L V + RPGYAIEYD+ +P++L TLE+K Sbjct: 313 GEETNEYYLNGFSSSLPIDIQIRALQTIPALRDVQLYRPGYAIEYDFFDPRDLHHTLESK 372 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 + GL+LAGQ+NGTTGYEEAA QGL+AGIN+A K + R ++YIGV+IDDL +K Sbjct: 373 LVPGLYLAGQVNGTTGYEEAAGQGLLAGINAALALQKKAPLVLRRDEAYIGVLIDDLVTK 432 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 GV EPYRMFTSRAEYRI LR DNAD RLTP +LG R R + + L +L Sbjct: 433 GVDEPYRMFTSRAEYRILLRQDNADLRLTPYAEQLGLATAERLSRLEQIKEGIATLDNLC 492 Query: 479 KSLVLTSKNLSSTSISFKQ---DGKTRTAYEFLSYPDFSIQNLFSICPD-ARKFSSL--- 531 + + + ++ S + D T+ L P S+ L + A + + L Sbjct: 493 ANYSVKPEEVNGYLASLGEKPLDFGTKLT-TLLLRPHVSLSGLIAQLDGFATQVAGLIGD 551 Query: 532 ---VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 ++ R + Y Y R+ A+++ E ++ DY + AL E +EKLS ++ Sbjct: 552 DEEILTRTETAIKYRGYIEREEQAAQKLHRLESLMLGDKLDYQQISALPIEAREKLSRIR 611 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIKK 615 P + QA++I G++P+ +N+LL+ + + Sbjct: 612 PATIAQAARIPGISPSDINILLVLLGR 638 >gi|108758960|ref|YP_635597.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Myxococcus xanthus DK 1622] gi|123247073|sp|Q1CVH6|MNMG_MYXXD RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|108462840|gb|ABF88025.1| glucose inhibited division protein A [Myxococcus xanthus DK 1622] Length = 615 Score = 483 bits (1242), Expect = e-134, Method: Compositional matrix adjust. Identities = 263/621 (42%), Positives = 368/621 (59%), Gaps = 30/621 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAG EAA A++G +T +T K +SCNPA+GG KGHLVRE+DAL Sbjct: 5 YDVIVVGLGHAGSEAALACARMGLATLGLTLKRERSAVLSCNPAVGGTAKGHLVRELDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MGR AD G F+ LN KGPAV+ R DR+ Y + MQ + SQ NL V +GEVA Sbjct: 65 GGEMGRAADQVGTHFKTLNASKGPAVQASRLLCDRDAYAVGMQAVLFSQPNLTVREGEVA 124 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + +V+ D + + S V+LTTGTFL+ ++H+G+ K GR+GD + L S Sbjct: 125 ALVAGGGRVEGVVLGDGTQVSASAVLLTTGTFLQALMHVGEQKEVGGRLGDDAARGLSES 184 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-------RQ- 237 F GR KTGTPARL +I WD E Q D R+ PFS+ T K+ RQ Sbjct: 185 LRALGFTLGRFKTGTPARLARASIDWDALEPQPGDTRVRPFSWRT-KVEGEGGMPFPRQP 243 Query: 238 -IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLE 296 + C +T T TH ++ +N+ S +Y GDI GPRYCPS+EDK+VRF R HQ+FLE Sbjct: 244 SVTCALTETTPRTHAVLRDNLHRSPLYQGDIVGRGPRYCPSLEDKVVRFASRERHQVFLE 303 Query: 297 PEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLE 356 PEG + +VYP G+ST+LP ++Q F+ TI GLE+V ++R GYA+EYDY P +L TLE Sbjct: 304 PEGPTSPLVYPAGLSTSLPADVQLTFLHTIRGLEQVEVVRFGYAVEYDYAPPTQLKATLE 363 Query: 357 TKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 TK I+GL+ AGQ+NGT+GYEEAA QGL AGIN+A + + R +++ V++DDL Sbjct: 364 TKAIAGLYFAGQLNGTSGYEEAAFQGLWAGINAALQLKGEPPLLPGRDEAHGAVLVDDLV 423 Query: 417 SKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRS 476 +KGV EP+RMFTSR+E+R+ LR NAD RL G ++G + +R + + Sbjct: 424 TKGVDEPFRMFTSRSEHRLKLREGNADLRLARHGHRVGLLPREALERVEARGRAVTEEVA 483 Query: 477 LLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 LK L ++ L +++ Q G+ R + LS PD + + + K+ V + Sbjct: 484 RLKRTGLAAR-LRRPEVTYAQLGEGREDWPVLS-PDVAEEVEVEV-----KYEGYVAQAA 536 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 + + A T R IP+ + + + LS+E EKL+ +P + QA Sbjct: 537 RAAAREAESTDRWR-------------IPEGYCFHEVRGLSSEAVEKLTAHRPGTVGQAR 583 Query: 597 KIEGMTPAALNLLLIYIKKNT 617 +I G+TPAA++LLL+ +K+ T Sbjct: 584 RIPGLTPAAVSLLLVALKRGT 604 >gi|326334829|ref|ZP_08201031.1| glucose inhibited division protein A [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325693008|gb|EGD34945.1| glucose inhibited division protein A [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 619 Score = 483 bits (1242), Expect = e-134, Method: Compositional matrix adjust. Identities = 275/620 (44%), Positives = 377/620 (60%), Gaps = 16/620 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAAA AA GA T LI+ + + MSCNPA+GG+ KG +VREIDAL Sbjct: 2 YDVIVVGAGHAGCEAAAAAANTGAKTLLISMQLQNMAQMSCNPAVGGIAKGQIVREIDAL 61 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG + D IQF++LN KGPA+ PR Q+DR + A + ++ NLD Q V Sbjct: 62 GGYMGIITDQTAIQFKMLNKSKGPAMWSPRAQSDRMRFSEAWRLQLEKLPNLDFFQEMVC 121 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E N + + S+I +VVLT GTFL GVIH+G + GR+G+ + + S Sbjct: 122 EVLIEHNKVIGVKTSLGSIIHSKSVVLTNGTFLNGVIHVGLKHLSGGRVGEKAAKGITES 181 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNRQIECGITR 244 + F+ GR+KTGTP R+DG+++ + K Q DE FSF+ K Q++C +T Sbjct: 182 LVAHGFEAGRMKTGTPPRVDGRSLDYSKMTPQPGDENPEKFSFLPITKPLIHQLDCYMTY 241 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ + H I+ S +++G I GPRYCPSIEDKI RF +++ HQ+F+EPEG +T Sbjct: 242 TSEQVHDILRTGFDRSPMFTGLIHGVGPRYCPSIEDKINRFADKDHHQLFIEPEGWHTVE 301 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y NG ST+LPEEIQ++ +R + G E V RPGYAIEYDY P +L TLETK + LF Sbjct: 302 MYVNGFSTSLPEEIQYEALRKVAGFENVKFFRPGYAIEYDYFPPTQLKHTLETKLVENLF 361 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AGIN++RK + R ++YIGV+IDDL +KG EPY Sbjct: 362 FAGQINGTTGYEEAGAQGLMAGINASRKVQEQSPFVLKRNEAYIGVLIDDLITKGTEEPY 421 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR LR DNAD RLTP+G LG E R + + + K +T Sbjct: 422 RMFTSRAEYRTLLRQDNADARLTPMGYALGLASEERMRLLEEKQAKTQAFVQFFKDTSIT 481 Query: 485 SKNLSST-----SISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF------SSLVI 533 + + S S KQ K + L+ P+ ++ +L I P ++F + Sbjct: 482 PEQANPILEKYDSSSMKQGDKMA---KVLARPNITVASLMEI-PSVKEFVQRKQLGKEEL 537 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E +IE YA Y ++ A ++ E IP++F+Y L +LS E +EKL ++P +L Sbjct: 538 ESTEIEIKYAGYIEKEKNNADKLNRLEDIRIPENFNYDKLTSLSFESREKLKKIRPTSLS 597 Query: 594 QASKIEGMTPAALNLLLIYI 613 QAS+I G++PA +++LLIY+ Sbjct: 598 QASRISGVSPADISILLIYM 617 >gi|4680645|gb|AAD27712.1|AF132937_1 CGI-02 protein [Homo sapiens] Length = 618 Score = 483 bits (1242), Expect = e-134, Method: Compositional matrix adjust. Identities = 261/592 (44%), Positives = 378/592 (63%), Gaps = 25/592 (4%) Query: 44 MSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELY 103 MSCNP+ GG+GKGHL+RE+DALDGL R+ D +G+ ++VLN +KGPAV G R Q DR+LY Sbjct: 1 MSCNPSFGGIGKGHLMREVDALDGLCSRICDQSGVHYKVLNRRKGPAVWGLRAQIDRKLY 60 Query: 104 RLAMQREILSQENLDVIQGEVAGF--------NTEKNIISSIVMQDNSMIRCSTVVLTTG 155 + MQ+EIL+ L V +G V +T K +S +V+ D S + +V+LTTG Sbjct: 61 KQNMQKEILNTPLLTVQEGAVEDLILTEPEPEHTGKCRVSGVVLVDGSTVYAESVILTTG 120 Query: 156 TFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTE 215 TFLRG+I IG PAGR+GD PS L + K F GRLKTGTP R+ ++I + Sbjct: 121 TFLRGMIVIGLETHPAGRLGDQPSIGLAQTLEKLGFVVGRLKTGTPPRIAKESINFSILN 180 Query: 216 KQFADERLIPFSFMTDKITNR---QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGP 272 K D IPFSF + + + Q+ C +T TN I+++N++ ++ + GP Sbjct: 181 KHIPDNPSIPFSFTNETVWIKPEDQLPCYLTHTNPRVDEIVLKNLQLNSHVKETTR--GP 238 Query: 273 RYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKV 332 RYCPSIE K++RF R HQ++LEPEG+++D++YP G+S LP E+Q + I I GLEK Sbjct: 239 RYCPSIESKVLRFPNRL-HQVWLEPEGMDSDLIYPQGLSMTLPAELQEKMITCIRGLEKA 297 Query: 333 NIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARK 392 +I+PGY ++YDY++P+++ P+LET + LF AGQINGTTGYEEAAAQG++AGIN++ + Sbjct: 298 KVIQPGYGVQYDYLDPRQITPSLETHLVQRLFFAGQINGTTGYEEAAAQGVIAGINASLR 357 Query: 393 SNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMK 452 ++ SRT+ YIGV+IDDLT+ G EPYRMFTSR E+R+SLRPDNAD+RLT G K Sbjct: 358 VSRKPPFVVSRTEGYIGVLIDDLTTLGTSEPYRMFTSRVEFRLSLRPDNADSRLTLRGYK 417 Query: 453 -LGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS----KNLSSTSISFKQDGKTRTAYEF 507 GC+ ++R +R S+LKS+ S K + SIS + R A + Sbjct: 418 DAGCVSQQRYERACWMKSSLEEGISVLKSIEFLSSKWKKLIPEASISTSRSLPVR-ALDV 476 Query: 508 LSYPDFSIQNLFSICPDA-RKFSSL--VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLI 564 L Y + + +L P+ +K++ + ERL+IE++Y + Q+ E K ++ +E + Sbjct: 477 LKYEEVDMDSLAKAVPEPLKKYTKCRELAERLKIEATYESVLFHQLQEIKGVQQDEALQL 536 Query: 565 PKDFDYSSLP--ALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIK 614 PKD DY ++ +LS+E++EKL +P + AS+I G+TPAA+ LL ++K Sbjct: 537 PKDLDYLTIRDVSLSHEVREKLHFSRPQTIGAASRIPGVTPAAIINLLRFVK 588 >gi|238855501|ref|ZP_04645806.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus jensenii 269-3] gi|282931527|ref|ZP_06337026.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus jensenii 208-1] gi|238831867|gb|EEQ24199.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus jensenii 269-3] gi|281304334|gb|EFA96437.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus jensenii 208-1] Length = 634 Score = 482 bits (1241), Expect = e-134, Method: Compositional matrix adjust. Identities = 261/617 (42%), Positives = 362/617 (58%), Gaps = 9/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAA +A++G T LIT + M CNP++GG KG +VREIDAL Sbjct: 10 YDVIVVGAGHAGCEAALASARMGQKTLLITISLDMVAFMPCNPSVGGPAKGTVVREIDAL 69 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ DA IQ R+LN KGPAVR R QAD+ Y M+R I NL + Q V Sbjct: 70 GGQMGKNIDATYIQMRILNTGKGPAVRALRAQADKVQYHETMKRTIEDTPNLTLRQATVD 129 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + ++ + +VVLTTGT RG I IG+L +G + L + Sbjct: 130 ELIVEDGVCHGVITNTGAKYLAKSVVLTTGTSARGRIIIGELTYSSGPNNTIAAIKLSEN 189 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 K F R KTGTP R++G TI + KTE++ D FSF T + Q+ C +T Sbjct: 190 LEKLGFKLRRFKTGTPPRVNGNTIDFSKTEEEPGDTEPRHFSFETKDEDYLKDQLSCWMT 249 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH+II +N+ + +Y+G I+ GPRYCPSIE KIVRF ++ HQIFLEPEG NTD Sbjct: 250 YTNETTHKIIRDNLDRAPMYTGVIEGVGPRYCPSIETKIVRFADKPRHQIFLEPEGKNTD 309 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 Y ST++PEE+Q + +I GLE ++RPGYAIEYD I P +L TLETK I L Sbjct: 310 EYYVGDFSTSMPEEVQQDMVHSIAGLENAEMMRPGYAIEYDVIEPWQLKHTLETKNIKNL 369 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ+NGT+GYEEA QG+VAGIN+A ++ R ++YIGV+IDDL +KG EP Sbjct: 370 FTAGQMNGTSGYEEAGGQGIVAGINAALRAQGKSGFTLGRDEAYIGVLIDDLVTKGTNEP 429 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT G KLG I + R + F ++ ++L + + Sbjct: 430 YRLLTSRAEYRLLLRNDNADLRLTEYGHKLGLISDERYQEFED--KKATIKQTLAELYDI 487 Query: 484 TSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 T K G++ A FL P +I + + + V E+++I Sbjct: 488 TIHPNDEVQAYLKSIGQSPLNAGLKASAFLRRPGVTIVAIEKLSGEKLNSDRYVREQVEI 547 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + YA Y +Q ++ ++++ E + IP+ DYS + L+ E ++K ++P ++ QA +I Sbjct: 548 DVKYAGYIKKQELQVQKLRRLESKKIPEGIDYSKIAGLATEARQKFEKIRPESIAQAERI 607 Query: 599 EGMTPAALNLLLIYIKK 615 G+ PA + +L +YI++ Sbjct: 608 SGVNPADIAILTVYIQQ 624 >gi|282880577|ref|ZP_06289284.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prevotella timonensis CRIS 5C-B1] gi|281305680|gb|EFA97733.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prevotella timonensis CRIS 5C-B1] Length = 623 Score = 482 bits (1241), Expect = e-134, Method: Compositional matrix adjust. Identities = 261/622 (41%), Positives = 369/622 (59%), Gaps = 15/622 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+VIGGGHAGCEAA AA+LGA T L+T + I MSCNPAIGG+ KG +VREIDAL Sbjct: 5 YDVLVIGGGHAGCEAATAAAQLGAKTCLVTMDMNKIAQMSCNPAIGGIAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG + DA IQFR+LN KGPAV PR Q DR Y L + + NLD+ Q E Sbjct: 65 GGHMGMITDATSIQFRMLNKGKGPAVWSPRAQCDRSKYILEWRTVLDHTPNLDIWQDEAC 124 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 T + ++ + + ++++T GTFL G++HIG+ K+P GR + L S Sbjct: 125 ELLTANSEVTGVRTVWGVELYAKSIIITAGTFLNGLMHIGRKKLPGGRCAEPAVYHLSES 184 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + R+KTGTP R+D +++ ++ E Q + FS+M+ +Q+ C T Sbjct: 185 IAQHGITVQRMKTGTPVRIDARSVHFEDMEVQDGENDFHQFSYMSGSRNLKQLPCWTCYT 244 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 E+H ++ + + S +++G I+S GPRYCPS+E K+V F +++ H +FLEPEG NT+ + Sbjct: 245 TPESHEVLRKGLPDSPLFNGQIQSTGPRYCPSVETKLVTFPDKDRHPLFLEPEGENTNEM 304 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG S+++P IQ + +R IP + I R GYAIEYDY +P +L P+LE+K + GLF Sbjct: 305 YLNGFSSSMPLNIQIEALRQIPAFREAKIYRAGYAIEYDYFDPTQLKPSLESKIVKGLFF 364 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ+NGTTGYEEAA QG+VAGIN+A D R +SYIGV+IDDLT+KGV EPYR Sbjct: 365 AGQVNGTTGYEEAAGQGIVAGINAAIHCFGGDPFVMKRDESYIGVLIDDLTTKGVDEPYR 424 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAEYRI LR D+AD RLT +LG ++ RF + Q+ + L+ TS Sbjct: 425 MFTSRAEYRILLRQDDADARLTEKAYQLGLA---KRDRFDWWTQKKESISHLMDYCNNTS 481 Query: 486 KNLSSTSISFKQDGKTRTAY-----EFLSYPDFSIQNLFSICPDAR-------KFSSLVI 533 + +++G + E ++ P SIQ L + P S +I Sbjct: 482 IKPKEINEMLERNGTSTLRMGCKISELIARPQISIQLLAEMIPSLSDEICKIPNRKSEII 541 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E +I+ Y Y R+ I A+++ E I FDY L LS E ++KL + P L Sbjct: 542 EATEIKIKYKGYIEREKIIAEKMHRLENIRIQDRFDYDQLHELSTEARQKLKRINPETLA 601 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 +AS+I G++P+ +N+LL+ + + Sbjct: 602 KASRIPGVSPSDINVLLVLLGR 623 >gi|298372104|ref|ZP_06982094.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroidetes oral taxon 274 str. F0058] gi|298275008|gb|EFI16559.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroidetes oral taxon 274 str. F0058] Length = 625 Score = 482 bits (1241), Expect = e-134, Method: Compositional matrix adjust. Identities = 267/631 (42%), Positives = 375/631 (59%), Gaps = 29/631 (4%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYD+IVIG GH+GCEAAA A+ LG+ L+T + I MSCNPA+GG+ KG +VREIDA Sbjct: 4 SYDIIVIGAGHSGCEAAAAASNLGSKVLLLTMDMNNIAQMSCNPAVGGIAKGQIVREIDA 63 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREIL-SQENLDVIQGE 123 L G MG V D IQFR+LN KG A+ PR+Q+DR Y + RE+L S NLD+ Q Sbjct: 64 LGGYMGIVTDDTSIQFRMLNRSKGAAMWSPRSQSDRAKY-IQRWRELLDSCPNLDIRQDV 122 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V F + + + + V+LT+GTFL G++H GK+++ GR+ ++ S L Sbjct: 123 VTEFIIKDGTVQGVKTRLMCEFGAKCVILTSGTFLNGLMHFGKIQVAGGRISETASYGLT 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNRQIECGI 242 + F TGR+KTGTP R++G +I + + +Q ++ FSF+ K T RQ C + Sbjct: 183 EQLREVGFVTGRMKTGTPLRINGNSIDFSRLTQQNGEDDFHKFSFLVRGKNTLRQRPCYL 242 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH I+ +I S +Y+G I+S GPRYCPSIE KIV F ++ HQ+F+EPEG T Sbjct: 243 THTNTRTHEILNRHIDESPLYNGQIQSIGPRYCPSIETKIVTFADKTSHQLFIEPEGETT 302 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 Y NG S++LP E+Q + + TI GLE+ I RPGYAIEYDY +P +L TLETK + Sbjct: 303 QEYYLNGFSSSLPIEVQLEALHTIEGLEQARIYRPGYAIEYDYFDPVQLKNTLETKLVKN 362 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQ+NGTTGYEEAA QGL+AGIN+ R ++YIGV+IDDLT+KGV E Sbjct: 363 LFFAGQVNGTTGYEEAAGQGLIAGINAHINCFGGKEFVLRRDEAYIGVLIDDLTTKGVDE 422 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKR----------FAKYIQEYN 472 PYRMFTSR+EYRI LR D+AD+RLT LG R+K Y ++ + Sbjct: 423 PYRMFTSRSEYRIILRQDSADSRLTRKSFDLGLATTERKKLLDVKNDNIDGLLSYFKQRS 482 Query: 473 FLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV 532 L + + L+ + +T IS K Y+ L P+ +I + PD R+ + V Sbjct: 483 VLPAEINGLL---EKTGATPIS-----KKTKLYDLLLRPNITIGAMCETLPDVREQADKV 534 Query: 533 --------IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKL 584 +E +I Y Y R+ + A + E IP++ +Y + +LS E ++KL Sbjct: 535 DQSRVEEILEEAEIVVKYGGYIDRERLIANKTNRLEYVNIPQEINYDDIQSLSTEARQKL 594 Query: 585 SILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 P + QAS+I G++P+ +N+L++ + + Sbjct: 595 KKHLPQTIGQASRIPGVSPSDINVLIVMLGR 625 >gi|169825320|ref|YP_001692931.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Finegoldia magna ATCC 29328] gi|205831511|sp|B0S3V1|MNMG_FINM2 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|167832125|dbj|BAG09041.1| glucose inhibited division protein A [Finegoldia magna ATCC 29328] Length = 627 Score = 482 bits (1241), Expect = e-134, Method: Compositional matrix adjust. Identities = 259/616 (42%), Positives = 371/616 (60%), Gaps = 9/616 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+V+G GHAGCEAA A+LG TA+++ ++ + CNP IGG GKGHLV+E+DAL Sbjct: 10 YDVVVVGAGHAGCEAALATARLGLKTAIMSISLDSVADLPCNPNIGGTGKGHLVKEVDAL 69 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG V D IQ R+LN KGPAV R QAD+ Y M+ + + ENLD+I+ EV Sbjct: 70 GGEMGLVIDKTYIQSRMLNTSKGPAVHSLRVQADKRKYHDEMKSVLENTENLDLIEAEVV 129 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E N I SI ++ V+L TGT+L+G++ +G+ +G G S L S Sbjct: 130 DIEVEDNKIKSITTAQGAIFPTRAVILATGTYLKGLVMMGEYTYESGPHGMKSSKKLSYS 189 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KITNRQIECGIT 243 + R KTGTPAR+ ++ ++ Q D+ +IPFSF+ D I+ +Q C +T Sbjct: 190 LKNLGIELRRFKTGTPARVHRDSLNYEVMTVQPGDDDVIPFSFLNDGKDISKKQEHCYLT 249 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 T L+T +II +N++ S +Y+G +K GPRYCPSIEDKIVRF +R+ HQ+F+EPEGL+T Sbjct: 250 YTTLKTKQIIEDNLERSPMYAGIVKGVGPRYCPSIEDKIVRFPDRDEHQVFVEPEGLSTK 309 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G+S+ LPEE+Q + +TI G E V +R Y IEYD I+P L TLE +I+ L Sbjct: 310 EMYIQGVSSTLPEEVQKEMYKTIIGFENVRFMRSAYGIEYDCIDPTILKRTLEHLEINNL 369 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQING++GYEEAA QG++AGIN+A + R+D+YIGV+IDDL +KG EP Sbjct: 370 FFAGQINGSSGYEEAAGQGIIAGINAAMNLLGKEPFVLDRSDAYIGVLIDDLVTKGTNEP 429 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRM TSR EYR++LR DNAD RLT ++G + R ++ + + LKS+++ Sbjct: 430 YRMMTSRCEYRLTLRQDNADLRLTERAHEIGLATDERYEKMLHKKKTIDEEIERLKSIMV 489 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSY---PDFSIQNLFSICPDARKFSSLVIERLQIES 540 T ++ + + +T L P+ + DA + RLQ+E+ Sbjct: 490 TPTEETNEKLRNLGSSELKTGITLLDLIKRPELTYDKTEEF--DAERTELPRYLRLQVET 547 Query: 541 --SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 Y Y +QM + K+ K E R + DY + LSNE +KL+ +KP +L QAS+I Sbjct: 548 HIKYEGYIAKQMSQIKQFKKLENRKLDMIEDYKEVMGLSNEAVQKLNDIKPESLGQASRI 607 Query: 599 EGMTPAALNLLLIYIK 614 G++P+ +N+LLIY++ Sbjct: 608 SGVSPSDINVLLIYME 623 >gi|304383737|ref|ZP_07366196.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prevotella marshii DSM 16973] gi|304335261|gb|EFM01532.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prevotella marshii DSM 16973] Length = 623 Score = 482 bits (1240), Expect = e-134, Method: Compositional matrix adjust. Identities = 260/620 (41%), Positives = 366/620 (59%), Gaps = 11/620 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+VIGGGHAGCEAA +A +GA+T LIT + I MSCNPAIGG+ KG +VREIDAL Sbjct: 5 YDVLVIGGGHAGCEAATASANMGATTCLITMDMNKIAQMSCNPAIGGIAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQE-NLDVIQGEV 124 G MG V DA IQFR+LN KGPA+ PR Q DRE + + R IL NLD+ Q + Sbjct: 65 GGQMGLVTDATAIQFRMLNRSKGPAMWSPRAQCDRERF-IWEWRSILDHTPNLDIWQDQA 123 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + + + + + ++V+T GTFL GV+HIGK ++ GR+ + Sbjct: 124 EELIVKNHTAVGVRTMWGAEMFAKSIVITAGTFLNGVMHIGKTQVQGGRLAEPAVLKFSE 183 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S + GR+KTGTP RLD ++I ++ TE Q + FSF+ Q+ C Sbjct: 184 SITQHGIRKGRMKTGTPVRLDKRSIHFEDTEIQKGESDFHQFSFIGKPRKLNQLPCWTFY 243 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ++H ++ +K S +Y+G I+S GPRYCPSIE K++ F ++ H +FLEPEG T+ Sbjct: 244 TTPQSHEVLRLGLKDSPLYNGQIQSIGPRYCPSIETKLITFPDKQQHPLFLEPEGETTNE 303 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y NG S+++P E+Q + + IP L + I RPGYAIEYDY +P +L +LE+K ISGLF Sbjct: 304 MYLNGFSSSMPMEVQIEALHQIPALREAKIYRPGYAIEYDYFDPIQLTHSLESKVISGLF 363 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ+NGTTGYEEA QGLVAGIN+A N R +SYIGV+IDDL +KGV EPY Sbjct: 364 FAGQVNGTTGYEEAGGQGLVAGINAAIHCNNGTPFIMHRDESYIGVLIDDLVTKGVDEPY 423 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYRI LR D+AD RLT LG R + + + + S + L Sbjct: 424 RMFTSRAEYRILLRQDDADARLTERAYHLGIAKRERYDYWQEKRENIQKILSFCEKTSLK 483 Query: 485 SKNLSSTSISFKQDGKTRTA--YEFLSYPDFSIQNLFSICPD-------ARKFSSLVIER 535 +K+++S R+A + ++ P S+ + SI P+ + +IE Sbjct: 484 AKDINSALERIGTTPIQRSAKIIDLIARPQVSLNAIGSIIPELNDILNAPKNRKEEIIEA 543 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 +I+ Y Y R+ I A+++ E I F+Y + L+ E ++KL + P L QA Sbjct: 544 TEIQIKYRGYVERERIIAEKMHRLENIKIKDRFNYMEMNQLATEARQKLQNINPETLAQA 603 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G++P+ +N+LL+ + + Sbjct: 604 SRIPGVSPSDINVLLVLLGR 623 >gi|284040354|ref|YP_003390284.1| glucose inhibited division protein A [Spirosoma linguale DSM 74] gi|283819647|gb|ADB41485.1| glucose inhibited division protein A [Spirosoma linguale DSM 74] Length = 620 Score = 482 bits (1240), Expect = e-134, Method: Compositional matrix adjust. Identities = 262/620 (42%), Positives = 360/620 (58%), Gaps = 12/620 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+G GHAGCEAA AA +G+ LIT TI MSCNPA+GG+ KG +VRE+DA Sbjct: 4 SYDVIVVGAGHAGCEAANAAATMGSKVLLITMNMQTIAQMSCNPAMGGVAKGQIVREVDA 63 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GL G ++D + IQFR+LN KGPA+ PR Q+DR ++ ++ + N+D Q V Sbjct: 64 LGGLSGIISDKSMIQFRMLNRSKGPAMWSPRCQSDRNVFAWEWRKALEENHNVDFWQDTV 123 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + + N + + VVLT GTFL G + IG+ GR + + L Sbjct: 124 SEVIVKDNRVKGVKTSLGVEFSAKAVVLTNGTFLNGQMFIGEKVFGGGRTAERSATGLTE 183 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F+ GR+KTGTP R+DG+++ + E+Q DE FS+ +Q C IT Sbjct: 184 QLVHLGFEAGRMKTGTPPRVDGRSLNYALMEEQLGDENPGKFSYTNTPALTKQRSCWITY 243 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN H + S +++G IK GPRYCPS+EDKI RF +++ HQIF+EPEG +T Sbjct: 244 TNQAVHDELKTGFDKSPMFTGRIKGLGPRYCPSVEDKINRFADKDRHQIFVEPEGWDTVE 303 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY NG ST+LPE +Q+ +R I G E V + RPGYA+EYD+ P +L PTLET+ + LF Sbjct: 304 VYVNGFSTSLPETVQYNALRKIQGFENVRMFRPGYAVEYDFFPPTQLKPTLETQLVQNLF 363 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAA QGL+AGIN+ R S++ R++ YIGV+IDDL +KG EPY Sbjct: 364 FAGQINGTTGYEEAACQGLMAGINAHRNSHEEAEFTIKRSEGYIGVLIDDLITKGTEEPY 423 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR LR DNAD RLT G IG Q+R+ + + + L +++ T Sbjct: 424 RMFTSRAEYRTLLRQDNADLRLTEKGY---AIGLASQERYETMLAKREGIAKLTETIRAT 480 Query: 485 SKNLSSTSISFKQDG-----KTRTAYEFLSYPDF---SIQNLFSICPD-ARKFSSLVIER 535 + + G + + Y L P+ ++ + S PD IE+ Sbjct: 481 KVKPEEINTFLESKGSAPLREKGSLYTLLKRPEIDQSDVKGILSSLPDMPNGVGEETIEQ 540 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 IE Y Y R+ A ++ E I FDY L ALS E KEKL L+P + QA Sbjct: 541 TVIEIKYEDYLNREKQNADKLDKWENLSINPTFDYDRLKALSFEGKEKLKRLRPSTIGQA 600 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G++P+ +++LL+Y+ + Sbjct: 601 SRISGVSPSDVSILLVYMGR 620 >gi|160932435|ref|ZP_02079825.1| hypothetical protein CLOLEP_01270 [Clostridium leptum DSM 753] gi|156868394|gb|EDO61766.1| hypothetical protein CLOLEP_01270 [Clostridium leptum DSM 753] Length = 626 Score = 482 bits (1240), Expect = e-134, Method: Compositional matrix adjust. Identities = 259/615 (42%), Positives = 377/615 (61%), Gaps = 5/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+VIG GHAG EAA AA+LG TA+ T +G+ CNP+IGG KGHLVREIDAL Sbjct: 8 YDVVVIGAGHAGIEAALAAARLGCKTAVFTINMDAVGNCPCNPSIGGTAKGHLVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ AD +Q R+LN KGPAV R Q DR Y M+ ++ QENLD+ QGE+ Sbjct: 68 GGEMGKTADQCLLQMRMLNRGKGPAVHSLRAQIDRRKYSEVMKHKLELQENLDLRQGEIT 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + V + N++ V++ TGT+L G I++G++ +G G P+ L S Sbjct: 128 EIRRLGDDRWQAVTRMNAVFEAKAVIVATGTYLGGRIYVGEVSYESGPDGTFPAAFLGKS 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + R KTGTPAR+ +I + ++Q ++ +IPFS+ T + + C I+ T Sbjct: 188 LKELGLRLRRFKTGTPARVLKSSIDFSGLQEQPGEDPVIPFSYDTAEPLKNKAVCHISWT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N +T +II+ENI S +Y G I+ GPRYCPS+EDKIVRF ++ HQ+F+EP G NT+ + Sbjct: 248 NEKTKQIILENIHRSPLYGGKIEGVGPRYCPSLEDKIVRFADKERHQLFIEPCGENTEEM 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+S++LPEE+Q QF +I GLE ++R YAIEYD ++P ++ TLE GL+ Sbjct: 308 YLQGMSSSLPEEVQLQFYHSIKGLEHCLVMRCAYAIEYDCVDPLQMAATLEFMDYPGLYG 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ NG++GYEEAAAQGLVAG+N+A K + + R SYIG +IDDL +KGV +PYR Sbjct: 368 AGQFNGSSGYEEAAAQGLVAGMNAALKIKGREQVVLDRASSYIGTLIDDLVTKGVEDPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQ-EYNFLRSLLKSLVLT 484 M TSR+EYR+ LR DNAD RLTP+G ++G I + R RF + + + L L K+ + Sbjct: 428 MMTSRSEYRLVLRQDNADERLTPLGREIGLISDSRWNRFVEKQELKRKELNRLKKTSLPP 487 Query: 485 SKNLSSTSISFKQDGKTRTA---YEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +K L+ +S ++ T E L P L + + E++++E Sbjct: 488 TKELNEILVS-RETSPVETGIRLLELLKRPQVDYACLAPVDTTRPDLDPNIFEQVEVEIK 546 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y RQ + E++ E + +PK+ DY + +S+E +EKL+ ++P N+ QAS+I G+ Sbjct: 547 YEGYIRRQKSQIDEMRRLEGKRLPKELDYQEIHGISSEAQEKLNRVRPGNIGQASRISGV 606 Query: 602 TPAALNLLLIYIKKN 616 +PA +++LLI++ +N Sbjct: 607 SPADISVLLIWLSQN 621 >gi|226315526|ref|YP_002775422.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Brevibacillus brevis NBRC 100599] gi|226098476|dbj|BAH46918.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Brevibacillus brevis NBRC 100599] Length = 632 Score = 482 bits (1240), Expect = e-134, Method: Compositional matrix adjust. Identities = 265/629 (42%), Positives = 380/629 (60%), Gaps = 18/629 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 S+DVIVIG GHAG EAA AA++G ST L+T + M CNP++GG KGH+VRE+DA Sbjct: 11 SFDVIVIGAGHAGAEAALAAARMGCSTLLLTINLDAVAYMPCNPSVGGPAKGHVVRELDA 70 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAV R QAD+ Y+ M++ I + NL + Q V Sbjct: 71 LGGEMGRNTDKTHIQMRMLNTGKGPAVHALRAQADKFAYQHEMKKTIENTPNLILRQAMV 130 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + ++ Q + +VVLTTGT+LRG I +G L+ +G PS L + Sbjct: 131 EELIVNDGVCEGVITQTGARYMAKSVVLTTGTYLRGKIILGDLQYESGPNNMRPSIRLAH 190 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F+ R KTGTP R+ ++ + K E Q D FS+ T + Q+ C +T Sbjct: 191 HLKELGFEMTRFKTGTPPRVHSSSVDFSKMEIQPGDPVPRAFSYETTEFIMDQLPCWLTY 250 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN ETH +I N+ + +YSG I+ GPRYCPSIEDK+VRF ++ HQIFLEPEG NT+ Sbjct: 251 TNEETHGLINSNLHRAPMYSGMIEGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTEE 310 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+ST+LPE++Q +R++ G+E+V ++RPGYAIEYD I P +L+P+LETK + GLF Sbjct: 311 MYVQGLSTSLPEDVQLSMLRSMAGMEEVKMMRPGYAIEYDSIVPTQLWPSLETKTLPGLF 370 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+AR+ + R ++YIGV+IDDL +KG EPY Sbjct: 371 TAGQINGTSGYEEAAGQGLMAGINAARRVQGKPPVILGRDEAYIGVLIDDLVTKGTHEPY 430 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL---KSL 481 R+ TSRAEYR+ LR DNAD RLT IG ++G I E R RF N R L+ K Sbjct: 431 RLLTSRAEYRLLLRHDNADLRLTDIGHEIGLISEERYHRF-------NQKRELIEQEKER 483 Query: 482 VLTSK---NLSSTSISFKQDGKTRTA-----YEFLSYPDFSIQNLFSICPDARKFSSLVI 533 V ++ ++ + G + L P+ + ++ + P V Sbjct: 484 VANTRVRPEMAHVQEVLRNAGSPELTDVIELAQLLRRPEINYSHIAQMVPAPEALPEDVT 543 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E+++I+ Y Y + + + + +K E+R IP D DY + LS E ++ ++ ++P N+ Sbjct: 544 EQVEIQIKYDGYIKKSLQQVERMKKMEERRIPTDIDYHQISGLSKESRDNMTKIRPLNIG 603 Query: 594 QASKIEGMTPAALNLLLIYIKKNTVKLNE 622 QA++I G+TPA +++L++Y++ V + E Sbjct: 604 QAARIAGVTPADISVLMVYLEYKRVGVAE 632 >gi|228472157|ref|ZP_04056923.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Capnocytophaga gingivalis ATCC 33624] gi|228276360|gb|EEK15084.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Capnocytophaga gingivalis ATCC 33624] Length = 619 Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust. Identities = 274/622 (44%), Positives = 378/622 (60%), Gaps = 16/622 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAAA AA GA T LIT + + MSCNPA+GG+ KG +VREIDAL Sbjct: 2 YDVIVVGAGHAGCEAAAAAANTGAKTLLITMQLQNMAQMSCNPAVGGIAKGQIVREIDAL 61 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG + D IQF++LN KGPA+ PR Q+DR + A + ++ NLD Q V Sbjct: 62 GGYMGIITDQTAIQFKMLNKSKGPAMWSPRAQSDRMRFSEAWRLQLERLPNLDFFQEMVT 121 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + S IR +VVLT GTFL G+IHIG ++ GR G+ + + Sbjct: 122 EVLIEGGKATGVKTSLGSEIRAKSVVLTNGTFLNGIIHIGLKQLGGGRAGEKAAKGITEC 181 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM--TDKITNRQIECGIT 243 + F+ GR+KTGTP R+DG+++ + K Q DE FS++ T +T+ Q++C +T Sbjct: 182 LVAHGFEAGRMKTGTPPRVDGRSLDYSKMTPQPGDENPEKFSYLPLTQPLTH-QLDCYMT 240 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 T+ E H I+ S +++G I GPRYCPSIEDKI RF +++ HQIF+EPEG +T Sbjct: 241 YTSEEVHDILRTGFDRSPMFTGIIHGVGPRYCPSIEDKINRFADKDRHQIFVEPEGWHTV 300 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y NG ST+LPEE+Q+ +R + G E+V +RPGYAIEYDY P +L TLETK I L Sbjct: 301 EMYVNGFSTSLPEEVQYTALRKVAGFEQVKFLRPGYAIEYDYFPPTQLKATLETKIIENL 360 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEA AQGL+AGIN++RK + R ++YIGV+IDDL +KG EP Sbjct: 361 FFAGQINGTTGYEEAGAQGLIAGINASRKVQEQSPFVLKRNEAYIGVLIDDLITKGTEEP 420 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR LR DNAD RLTP+G LG E R + + + K + Sbjct: 421 YRMFTSRAEYRTLLRQDNADMRLTPMGYALGLASEERMRLLEEKQTKTAAFVQFFKETSI 480 Query: 484 TSKNLSS-----TSISFKQDGKTRTAYEFLSYPDFSIQNLFSI-----CPDARKFSSLVI 533 T + + S KQ K + L+ P+ ++++ + A++ S V+ Sbjct: 481 TPEEANPLLEKYDSSPMKQGDKMA---KVLARPNITVEDFMELPQVKAFAHAQQLSKEVL 537 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E +IE YA Y ++ A ++ E IP+ F+Y L +LS E +EKL ++P L Sbjct: 538 ESTEIEIKYAGYIEKEKNNADKLNRLEDIRIPESFNYDKLTSLSFESREKLKKIRPTTLS 597 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I G++PA +++LL+Y+ + Sbjct: 598 QASRISGVSPADISILLVYMGR 619 >gi|227873161|ref|ZP_03991452.1| glucose-inhibited division protein A [Oribacterium sinus F0268] gi|227840992|gb|EEJ51331.1| glucose-inhibited division protein A [Oribacterium sinus F0268] Length = 633 Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust. Identities = 262/616 (42%), Positives = 377/616 (61%), Gaps = 11/616 (1%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALD 66 D++V+G GHAG EAA V+AK G T L T +I M+CNP IGG KGHLVRE+DAL Sbjct: 9 DIVVVGAGHAGVEAALVSAKRGHKTLLFTLSPDSISMMACNPNIGGSSKGHLVRELDALG 68 Query: 67 GLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAG 126 G+MG+V D + +Q R+LN KGPAV R QAD+++Y M+ + +QENL + QGE+ Sbjct: 69 GMMGKVCDQSFLQSRMLNQSKGPAVHSLRAQADKQVYSRNMRHLVENQENLHIRQGEIVS 128 Query: 127 F--NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 N EK I +V + V++ TG +L G++ G G + L Sbjct: 129 LLCNEEKTEIRGVVSSTGARYYAKAVLICTGVYLNARCIYGEVSEETGPNGLRRATKLSQ 188 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR--QIECGI 242 + + F R KTGTPAR+D +++ + K E Q D ++PFSF TD + + Q +C + Sbjct: 189 ALLDLGFRLQRFKTGTPARVDRRSLDFSKMEVQKGDVPVVPFSFSTDPASVQIPQEDCYL 248 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T T E H +I ENI S +Y+G I+ GPRYCPSIEDK+++F E+N HQIF+EPEG T Sbjct: 249 TYTCEEGHEMIRENIDRSPMYNGVIQGTGPRYCPSIEDKVMKFPEKNRHQIFVEPEGRYT 308 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + +Y +G+S++LPE++Q + +RT+ G EK ++R GYAIEYD +N EL TLETKKISG Sbjct: 309 NEMYLSGLSSSLPEDVQMRILRTMAGFEKSEMVRCGYAIEYDCLNSLELENTLETKKISG 368 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQ+NG++GYEEAA QG +AGIN+ +K + R+++YIGV+IDDL +K E Sbjct: 369 LYFAGQMNGSSGYEEAAVQGFMAGINAVQKIEGKEPFVLDRSEAYIGVLIDDLVTKENKE 428 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGER-----RQKRFAKYIQEYNFLRSL 477 PYRM TSRAEYR+ LR DNAD RL G LG + E R+K+ A + + Sbjct: 429 PYRMMTSRAEYRLLLRQDNADLRLREKGYALGMVSEEEIKATREKQEAIQKELRRMETTY 488 Query: 478 LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 + + ++ L S S S Q G + E P+ + QN+ + P+ S + E ++ Sbjct: 489 IGANAENNRILESISSSPIQSGI--SLRELCKRPECNYQNIAPLDPERPFLSPFIQEEVE 546 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 IE Y Y RQ+ + + K E++ +PKD Y + L E ++KL +++P N+ AS+ Sbjct: 547 IEIKYEGYIKRQIQQVEAFKKMERKKLPKDICYHDIHNLRLEARQKLDLIRPENMGMASR 606 Query: 598 IEGMTPAALNLLLIYI 613 I G++PA L++LLIY+ Sbjct: 607 ISGVSPADLSVLLIYL 622 >gi|119569151|gb|EAW48766.1| mitochondrial translation optimization 1 homolog (S. cerevisiae), isoform CRA_g [Homo sapiens] Length = 618 Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust. Identities = 261/592 (44%), Positives = 377/592 (63%), Gaps = 25/592 (4%) Query: 44 MSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELY 103 MSCNP+ GG+GKGHL+RE+DALDGL R+ D +G+ ++VLN +KGPAV G R Q DR+LY Sbjct: 1 MSCNPSFGGIGKGHLMREVDALDGLCSRICDQSGVHYKVLNRRKGPAVWGLRAQIDRKLY 60 Query: 104 RLAMQREILSQENLDVIQGEVAGF--------NTEKNIISSIVMQDNSMIRCSTVVLTTG 155 + MQ+EIL+ L V +G V +T K +S +V+ D S + +V+LTTG Sbjct: 61 KQNMQKEILNTPLLTVQEGAVEDLILTEPEPEHTGKCRVSGVVLVDGSTVYAESVILTTG 120 Query: 156 TFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTE 215 TFLRG+I IG PAGR+GD PS L + K F GRLKTGTP R+ ++I + Sbjct: 121 TFLRGMIVIGLETHPAGRLGDQPSIGLAQTLEKLGFVVGRLKTGTPPRIAKESINFSILN 180 Query: 216 KQFADERLIPFSFMTDKITNR---QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGP 272 K D IPFSF + + + Q+ C +T TN I+++N+ ++ + GP Sbjct: 181 KHIPDNPSIPFSFTNETVWIKPEDQLPCYLTHTNPRVDEIVLKNLHLNSHVKETTR--GP 238 Query: 273 RYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKV 332 RYCPSIE K++RF R HQ++LEPEG+++D++YP G+S LP E+Q + I I GLEK Sbjct: 239 RYCPSIESKVLRFPNRL-HQVWLEPEGMDSDLIYPQGLSMTLPAELQEKMITCIRGLEKA 297 Query: 333 NIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARK 392 +I+PGY ++YDY++P+++ P+LET + LF AGQINGTTGYEEAAAQG++AGIN++ + Sbjct: 298 KVIQPGYGVQYDYLDPRQITPSLETHLVQRLFFAGQINGTTGYEEAAAQGVIAGINASLR 357 Query: 393 SNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMK 452 ++ SRT+ YIGV+IDDLT+ G EPYRMFTSR E+R+SLRPDNAD+RLT G K Sbjct: 358 VSRKPPFVVSRTEGYIGVLIDDLTTLGTSEPYRMFTSRVEFRLSLRPDNADSRLTLRGYK 417 Query: 453 -LGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS----KNLSSTSISFKQDGKTRTAYEF 507 GC+ ++R +R S+LKS+ S K + SIS + R A + Sbjct: 418 DAGCVSQQRYERACWMKSSLEEGISVLKSIEFLSSKWKKLIPEASISTSRSLPVR-ALDV 476 Query: 508 LSYPDFSIQNLFSICPDA-RKFSSL--VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLI 564 L Y + + +L P+ +K++ + ERL+IE++Y + Q+ E K ++ +E + Sbjct: 477 LKYEEVDMDSLAKAVPEPLKKYTKCRELAERLKIEATYESVLFHQLQEIKGVQQDEALQL 536 Query: 565 PKDFDYSSLP--ALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIK 614 PKD DY ++ +LS+E++EKL +P + AS+I G+TPAA+ LL ++K Sbjct: 537 PKDLDYLTIRDVSLSHEVREKLHFSRPQTIGAASRIPGVTPAAIINLLRFVK 588 >gi|163848990|ref|YP_001637034.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Chloroflexus aurantiacus J-10-fl] gi|222526950|ref|YP_002571421.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Chloroflexus sp. Y-400-fl] gi|205831520|sp|A9WKL7|MNMG_CHLAA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|163670279|gb|ABY36645.1| glucose inhibited division protein A [Chloroflexus aurantiacus J-10-fl] gi|222450829|gb|ACM55095.1| glucose inhibited division protein A [Chloroflexus sp. Y-400-fl] Length = 651 Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust. Identities = 271/639 (42%), Positives = 363/639 (56%), Gaps = 29/639 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAA AA+LG T L+T + MSCNP+IGG KGHLVREIDAL Sbjct: 5 YDVIVVGAGHAGCEAAHAAARLGCRTLLLTIDLDKLAHMSCNPSIGGPAKGHLVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLMGR+ D + IQ R+LN KGPAV+ R Q D+ LY M+ + NLD+ Q V Sbjct: 65 GGLMGRITDRSAIQIRLLNESKGPAVQSLRAQCDKRLYARLMKETLERVPNLDLRQAMVE 124 Query: 126 GFNTEKNIISSIVMQDNSMIR--CSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 + ++ R V+LTTGTFLRG G+ AGR G++P+ +L Sbjct: 125 RIAPPNADTQCFTVTTHTGWRYLAPAVILTTGTFLRGRAITGEAMWGAGRAGEAPAMALS 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI---------- 233 F RLKTGTP RL TI + TE Q + + F ++ Sbjct: 185 EDLAALGFPLVRLKTGTPPRLAAATIDFSLTELQPGSDTPLSFGHYYPELGETIPPPEYH 244 Query: 234 --------------TNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIE 279 Q+ C T E H II EN+ + ++SG I+ GPRYCPSIE Sbjct: 245 GPPAPVYPHPQLDGWRPQLPCYQVHTTPEFHAIIRENLHRAPLFSGIIEGVGPRYCPSIE 304 Query: 280 DKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGY 339 DKIVRF ++ H +FLEPEG T VY G +T+LPE++Q +R+IP L V ++R GY Sbjct: 305 DKIVRFADKERHGLFLEPEGWTTSEVYVQGCNTSLPEDVQWAMLRSIPALRNVELMRIGY 364 Query: 340 AIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCI 399 AIEYD + E+ ++T+++ GLF AGQINGTTGYEEAAAQGL+AGIN+A + Sbjct: 365 AIEYDAVATGEITADMQTRRLRGLFFAGQINGTTGYEEAAAQGLMAGINAAHYVQGKPPV 424 Query: 400 CFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCI-GE 458 R ++YIGV+IDDLT+K + EPYRMFTSRAEYR+ LR DNAD RLTP+ +LG + GE Sbjct: 425 ILGRAEAYIGVLIDDLTTKEIREPYRMFTSRAEYRLLLRGDNADLRLTPLAYRLGLVDGE 484 Query: 459 RRQKRFAKYIQEYNFLRSLLKSLVLTSK--NLSSTSISFKQDGKTRTAYEFLSYPDFSIQ 516 R A+ Q + L+ + + + S N S + K + T E L+ P+ Sbjct: 485 RAAVVEARRQQTEHALQQMRERRIFPSAAVNASLEAHGIKPISQPVTVAEVLARPEVRYT 544 Query: 517 NLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPAL 576 L PD S VIE+++I Y+ Y RQ E ++ E R IP DFDY+SLP L Sbjct: 545 QLRDALPDLPALSDAVIEQVEIGCKYSGYIARQEREVARMQKMEHRRIPPDFDYTSLPGL 604 Query: 577 SNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 NE ++ L +P L QA ++ G+ PA + ++L +++ Sbjct: 605 RNEARQVLMRFRPATLGQAGRLAGINPADVAIILFALER 643 >gi|254424794|ref|ZP_05038512.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Synechococcus sp. PCC 7335] gi|196192283|gb|EDX87247.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Synechococcus sp. PCC 7335] Length = 629 Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust. Identities = 256/617 (41%), Positives = 370/617 (59%), Gaps = 11/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DV+V+G GHAGCEAA AA+LG T L+T I CNPA+GG K L E+DAL Sbjct: 9 FDVVVVGAGHAGCEAALAAARLGCRTLLLTMNLDRIAWQPCNPAVGGPAKSQLAHEVDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G +G++AD +Q R+LN +GPAV R Q D+ Y M+ + +QENL + +G Sbjct: 69 GGEIGKIADRTYLQKRILNSSRGPAVWALRAQTDKREYAAVMKSVVENQENLILREGMAT 128 Query: 126 GFNT-EKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 ++ I I C +LTTGTFL G I +GK + AGR G+ + + Sbjct: 129 DLVLGDRGEIIGIETHFGMTFGCQAAILTTGTFLNGTIWVGKKSLSAGRAGEPAAIGMSE 188 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGIT 243 + + F+T RLKTGTPAR+D +++ + + E+Q D + FSF + R QI C +T Sbjct: 189 TLSRLGFETSRLKTGTPARVDKRSVDYSRLEEQPGDPNVRWFSFDPEVWQEREQIPCYMT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 RT TH+++ +N+ S +Y G +++ GPRYCP IEDKIVRF ++ HQIF+EPEG + Sbjct: 249 RTTAATHQLVRDNLHLSPVYGGWVEAKGPRYCPCIEDKIVRFADKESHQIFIEPEGRDYP 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G ST LPE +Q + T+PGLE ++RP YA++YDYI + FPTL TKK+ GL Sbjct: 309 ELYIQGFSTGLPEHLQVDMLHTLPGLENCTMLRPAYAVDYDYIPATQCFPTLMTKKVEGL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAA QGLVAGIN+AR + I F R SY+G +IDDL +K + EP Sbjct: 369 FCAGQINGTTGYEEAAGQGLVAGINAARLVQAKELIVFPREGSYLGTLIDDLCTKDLREP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR----QKRFAKYIQEYNFLRS--L 477 YR+ TSR+EYR+ LR DNAD RLTP+G ++G I +RR Q++ A I E L + + Sbjct: 429 YRVLTSRSEYRLILRSDNADQRLTPLGREIGLIDDRRWQLYQQKQANIIAEKERLHTERV 488 Query: 478 LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 + + + + T K + T + + P F ++L S + ++ E + Sbjct: 489 KEQTEVGQQIYADTQQKIK---GSVTLADLIRRPKFHYEHLESYGLGNQALTTAEKEGAE 545 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ Y+ Y RQ + + + R +P+D DY ++ LS E +EKL+ +KP + QA++ Sbjct: 546 IDIKYSGYIQRQQKQIDLVSRQTNRSLPQDLDYMTVETLSMESREKLNKVKPLTVGQATR 605 Query: 598 IEGMTPAALNLLLIYIK 614 I G+ PA +N LL++++ Sbjct: 606 IGGVNPADVNALLVFLE 622 >gi|169351491|ref|ZP_02868429.1| hypothetical protein CLOSPI_02271 [Clostridium spiroforme DSM 1552] gi|169291713|gb|EDS73846.1| hypothetical protein CLOSPI_02271 [Clostridium spiroforme DSM 1552] Length = 620 Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust. Identities = 262/624 (41%), Positives = 376/624 (60%), Gaps = 13/624 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAG EAA A++ T LIT +GS+ CN +IGG KG +VREIDAL Sbjct: 2 YDVIVVGGGHAGIEAALAPARMKQKTVLITANFDNVGSLPCNTSIGGPAKGIIVREIDAL 61 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + AD +Q ++LN KGP V+ R QAD++ Y MQ + Q+NLD+I+G V Sbjct: 62 GGQMAKTADETYLQMKMLNTAKGPGVQSLRAQADKKAYPRYMQAVLKKQDNLDIIEGMVE 121 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E N + +++ + I TV+LTTGT+L+ I G K +G L Sbjct: 122 DLMVEDNCVKGVILANGQEIIGKTVILTTGTYLKAEILCGDQKHASGPDDQEECKYLSTR 181 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--NRQIECGIT 243 + RLKTGTP R++ ++ + KT Q + + FS+ T+K + Q+ C +T Sbjct: 182 LKELGLRIQRLKTGTPPRVEINSVDYSKTSLQPGSDAKLAFSYQTNKFIPIDEQVPCYLT 241 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH+II EN+ S++Y G + GPRYCPSIEDKIV+F ++ HQIFLEPE + Sbjct: 242 YTNEKTHKIIKENLHRSSMYGGYVSGVGPRYCPSIEDKIVKFSDKPQHQIFLEPESKEMN 301 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G ST+LP ++Q + IRTIPGLE I++ YAIEYD I+P +L+P+LETK I L Sbjct: 302 TIYVQGFSTSLPHDVQEEMIRTIPGLEHCKILKYAYAIEYDAIDPLQLWPSLETKIIKNL 361 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGT+GYEEAA+QGL+AGIN+ K+ + + R ++YIGVMIDDL +KG EP Sbjct: 362 FTAGQINGTSGYEEAASQGLIAGINATLKNQNKEPLILKRDEAYIGVMIDDLVTKGTEEP 421 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRM TSRAEYR+ +R DNAD RL G +G I + +++ + + L ++ Sbjct: 422 YRMLTSRAEYRLLIRHDNADERLMKYGHDVGLISDDIYQQYLNKMSNIFNEIARLDTIRF 481 Query: 484 TSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 T K+ + +Q G TR +A E + P+ + + DA + +R+ I Sbjct: 482 TPKH--PINDVLEQLGSTRLNEGISAKELIKRPELDYEKILPFI-DAPDLNEEERKRITI 538 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 Y Y + M +A++ K E++ IP+D DY+ + L+ E K+KLS ++P + QAS+I Sbjct: 539 LIKYKGYIDKAMRQAEKQKKMEEKKIPEDVDYNEISNLALEAKQKLSSIRPLTIGQASRI 598 Query: 599 EGMTPAALNLLLIYIKKNTVKLNE 622 G+ PA +++LLIY+K+ K NE Sbjct: 599 SGINPADISVLLIYLKQ---KYNE 619 >gi|332297240|ref|YP_004439162.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Treponema brennaborense DSM 12168] gi|332180343|gb|AEE16031.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Treponema brennaborense DSM 12168] Length = 627 Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust. Identities = 266/646 (41%), Positives = 369/646 (57%), Gaps = 89/646 (13%) Query: 19 EAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGI 78 EAA A+++G T L+T +IG MSCNP+IGG+ KG++VREIDAL G MGR+ D + I Sbjct: 21 EAALAASRMGLKTLLVTQTIDSIGRMSCNPSIGGIAKGNIVREIDALGGEMGRLIDKSMI 80 Query: 79 QFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNI----- 133 QFR+LN +GPAV+ PR QAD+ LY + + S NL V+Q V +++ Sbjct: 81 QFRLLNRSRGPAVQAPRAQADKLLYAQLARHTLESAPNLSVLQDTVVDIEAAESVASLPP 140 Query: 134 -------------------------ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLK 168 IS++V + I VLTTGTFL G I IG Sbjct: 141 DSSGISEPGSLPGETRGGGASMRQKISALVTERGRRIPVRAAVLTTGTFLGGRIFIGAYD 200 Query: 169 IPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSF 228 P GR+G+ + L + K F TGRLKTGTP R+ +I + E Q D +IPFSF Sbjct: 201 APCGRLGEQGAFGLTQALNKLGFTTGRLKTGTPPRVLKSSIDFSVLELQQGDLDVIPFSF 260 Query: 229 MTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGER 288 T +I + C + TN ETHRII ENI S +YSG I GPRYCPSIEDK++RF ER Sbjct: 261 DTKQIDRPMVPCHLVYTNTETHRIIRENISKSPLYSGKISGIGPRYCPSIEDKVMRFAER 320 Query: 289 NGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINP 348 HQ+F+EPEGL TD +Y NG S++LPE++Q F+RT+PG + RPGYA+EYD+I+P Sbjct: 321 ERHQLFVEPEGLTTDEMYINGFSSSLPEDVQDSFLRTLPGFADAVVSRPGYAVEYDFIDP 380 Query: 349 KELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSA--RKSNKLDC-------- 398 +LFP+LETK ++GLF AGQINGT+GYEEAA QGLVAGIN+A K++ L C Sbjct: 381 TQLFPSLETKPVAGLFTAGQINGTSGYEEAAGQGLVAGINAALYAKAHALLCGPFPCHPD 440 Query: 399 ----------ICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTP 448 + SR+++YIGV+IDDL + G EPYRMFT+RAEYR+ LR D AD RL Sbjct: 441 RRADIPSYEPLVLSRSEAYIGVLIDDLVTLGTKEPYRMFTARAEYRLKLRHDTADRRLCG 500 Query: 449 IGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFL 508 G G Q R+ +++ +R + L L ++N ++ Sbjct: 501 KGFAAGL---NSQSRYEAVLEK---IRMEDEILALLARNPAA------------------ 536 Query: 509 SYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDF 568 D + + + E Q++ Y Y +Q +++K + IP +F Sbjct: 537 ---------------DNPGYPAALWEEAQVDFKYKHYIEKQDKRVEKLKRMDTARIPDNF 581 Query: 569 DYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIK 614 DY+++P+LS E ++KL ++P L QAS+I G+ + + LL++Y+K Sbjct: 582 DYAAIPSLSAESRQKLEKIRPLTLGQASRISGIRNSDIMLLMVYLK 627 >gi|290968161|ref|ZP_06559706.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Megasphaera genomosp. type_1 str. 28L] gi|290781836|gb|EFD94419.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Megasphaera genomosp. type_1 str. 28L] Length = 629 Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust. Identities = 266/624 (42%), Positives = 379/624 (60%), Gaps = 24/624 (3%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIG GHAGCEAA AA+LG T + T I M CNPA+GG GK HLVREIDA Sbjct: 6 TYDVIVIGAGHAGCEAALAAARLGVRTLICTLNLDNIALMPCNPAVGGPGKSHLVREIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D IQ R+LN KGPAV R Q+D+++Y++ M + +Q+NLDV Q + Sbjct: 66 LGGEMAINTDKTCIQMRMLNTGKGPAVYSLRAQSDKKVYQMTMTETLENQKNLDVKQLLI 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E N ++ +V + + R V+L TGT+L+G I IG G MG + +L Sbjct: 126 TELLFEGNKVTGVVTELGEVYRAKAVILATGTYLKGKILIGDCSYAGGPMGQRSAEALSA 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S + R KTGTPAR+D +T+ ++ EKQ D + FSF+ + C +T Sbjct: 186 SLRQAGIRLMRFKTGTPARVDRRTLRTEEMEKQEGDTKGHAFSFLLPRQNRNTDCCWLTF 245 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN ETHRII +N+ + +G ++ GPRYCPSIE KI RF ++ HQ+F+EPEG T+ Sbjct: 246 TNEETHRIIRDNLHRAPTCNGTVQGIGPRYCPSIESKIQRFADKKRHQLFIEPEGKMTEE 305 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+ST+LP ++Q+ F++TIPGLE V I+RP YAIEYD ++P +L L K+ GL+ Sbjct: 306 MYIQGMSTSLPVDVQYAFLKTIPGLEDVKIMRPAYAIEYDCLDPLQLDAALAVKEKEGLY 365 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ NGT+GYEEAAAQGL+AGIN+AR + D +R ++YIGV+IDDL +KG EPY Sbjct: 366 SAGQANGTSGYEEAAAQGLIAGINAARFVLQQDPFILTRAEAYIGVLIDDLVTKGTQEPY 425 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSR+EYR+ LR DNAD RLT G +G + +R+A + Q+ ++ LK+L Sbjct: 426 RMMTSRSEYRLLLRQDNADLRLTQKGYDMGLVTP---ERYAVFQQKQQAIQEALKAL--- 479 Query: 485 SKNLSSTSISFKQDGKTR----------TAYEFLSYPDF---SIQNLFSICPDARKFSSL 531 K + T + Q+ R TAY+ L + ++Q +F + P S+ Sbjct: 480 -KECAVTPTAITQEKLRRIGTAPVRTGTTAYDLLRRNEVTYDTLQQVF-LLPS---VSAE 534 Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 V E ++I Y Y RQ + +++ E++L+P Y SL +S E +EKL+ ++P + Sbjct: 535 VQEEMEIMVKYEGYIERQAEQVEKMNRLEQKLLPSSIQYDSLTTVSAEGREKLARIRPRS 594 Query: 592 LLQASKIEGMTPAALNLLLIYIKK 615 + QA +I G++PA + LLIY+++ Sbjct: 595 IGQAGRISGVSPADITALLIYLEQ 618 >gi|83319255|ref|YP_424798.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|123535456|sp|Q2SR15|MNMG_MYCCT RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|83283141|gb|ABC01073.1| glucose inhibited division protein A [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 629 Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust. Identities = 255/619 (41%), Positives = 374/619 (60%), Gaps = 10/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+GGGHAG EAA +A+L TALI I +M CNP++GG KG +VREIDA Sbjct: 4 NYDVIVVGGGHAGVEAALASARLNKKTALINLYEDKIATMPCNPSVGGPAKGIVVREIDA 63 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M + ADA +Q ++LN +GP V R Q+D+E Y M+ I Q+NLD+I Sbjct: 64 LGGEMAKAADATALQTKLLNSSRGPGVWALRVQSDKEEYSKYMRNVIKKQKNLDLITKAC 123 Query: 125 AGFNTEKN-IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 G + N ++ I + D ++ V++TTGT+L+ I G + +G + + + Sbjct: 124 TGLVYDDNKSVTGIYLDDEIILNAKAVIITTGTYLKSEILKGIDRYESGPNNEKTTKGIS 183 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--NRQIECG 241 S + R KTGTPAR+ ++ + + + + FSF T+ T +Q C Sbjct: 184 KSLIDLGIKLMRFKTGTPARVYRDSVDLSRAIIEPGTDMKLAFSFSTNTYTPIEKQQPCY 243 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 + + LET +II +N++ SA+YSG ++S GPRYCPS EDK+VRF E++ HQIF+EPE LN Sbjct: 244 LIHSTLETKKIIEDNLEKSAMYSGTVESIGPRYCPSFEDKVVRFKEKDTHQIFIEPETLN 303 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 D Y G ST++P E+Q ++++PG E V + YAIEYD I+P +L P+LE K + Sbjct: 304 GDTWYVQGFSTSMPIEVQELMLKSLPGFENVRVKHWAYAIEYDCIDPMQLSPSLELKDVR 363 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 LF AGQINGT+GYEEAA QGL+AGIN++RK + LD I R ++YIGVMIDDL +KGV Sbjct: 364 NLFTAGQINGTSGYEEAAGQGLIAGINASRKIDGLDPIILRRDEAYIGVMIDDLINKGVW 423 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAE+R+ LR DNA+ RL G ++G I + +++ Y++E LK + Sbjct: 424 EPYRLLTSRAEHRLLLRNDNAETRLKQYGREIGLISDTEWEQYLIYVKEIEQAIKELKEI 483 Query: 482 VLTSKNLSSTSISFKQDGKTR---TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 T K+ + ++ K+ + YE + P I L P +K + ++ + I Sbjct: 484 RFTPKSQLAINLKNKKQADLSHGYSGYEIIKIPTVDINELIEFIPSLQKLKTNQLQSIVI 543 Query: 539 ESSYAAYTG--RQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 E + Y RQ+++ K +K E K+ IP D +YS + L+ E K+KL ++P N+ QAS Sbjct: 544 EIRFEGYVKKERQLVD-KLVKLERKK-IPLDINYSKVDNLATEAKDKLEKIRPLNIGQAS 601 Query: 597 KIEGMTPAALNLLLIYIKK 615 +I G+ PA + +LL Y+KK Sbjct: 602 RITGVNPADIQMLLFYLKK 620 >gi|50552478|ref|XP_503649.1| YALI0E06941p [Yarrowia lipolytica] gi|49649518|emb|CAG79231.1| YALI0E06941p [Yarrowia lipolytica] Length = 688 Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust. Identities = 274/646 (42%), Positives = 382/646 (59%), Gaps = 39/646 (6%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+V+GGGHAGCEA+A AA+ GA T L+T K IG+ SCNP+IGG+GKG LV E+DA+ Sbjct: 38 YDVVVVGGGHAGCEASAAAARSGARTLLVTPKFDNIGTCSCNPSIGGIGKGTLVTEVDAM 97 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGLMGRVAD AGI F++LN +G AV G R Q DR++Y+ MQ+ I NL+V++G V Sbjct: 98 DGLMGRVADKAGIHFKMLNRSRGFAVWGLRAQIDRKIYKKEMQQLIRDYPNLEVLEGTVE 157 Query: 126 GFNTEKNI----------ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMG 175 T I+ + ++ I VV+TTGTFL G IHIG P+GRMG Sbjct: 158 DLLTTPEATPDAVKSYGSIAGLTLESGETINTEKVVITTGTFLGGEIHIGLEAYPSGRMG 217 Query: 176 DSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI-- 233 + + + N+ + F GRLKTGTP R+D TI + + DE PFS++ D + Sbjct: 218 EKATFGISNTLREVGFMLGRLKTGTPPRIDSTTIDYSTMLPELQDEDPFPFSYLNDDVPA 277 Query: 234 ------------------TNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYC 275 N + C +T TH +I +N+ S D+K GPRYC Sbjct: 278 AKTDGSVNEETPAELRGPNNHSVVCYKAKTVKATHDLIRDNLDKSIHIREDVK--GPRYC 335 Query: 276 PSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNII 335 PSIE KI+RF +++ H I++EPEGL+T +YPNGIST LP E Q Q ++TIPG E V + Sbjct: 336 PSIESKIIRFADKDSHVIWVEPEGLDTTTIYPNGISTTLPAETQLQVLKTIPGFENVTMT 395 Query: 336 RPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNK 395 +PGY +EYDY++P+EL TLETK + GL+LAGQINGTTGYEEAAAQG++AG N+ ++ Sbjct: 396 QPGYGVEYDYVDPRELKNTLETKLVHGLYLAGQINGTTGYEEAAAQGIIAGFNAGLQAQN 455 Query: 396 LDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGC 455 + R+D YIGV+IDDL +KGV EPYRMFTSR+E+R S+R DNAD RLT + G Sbjct: 456 KEPFTMRRSDGYIGVLIDDLITKGVSEPYRMFTSRSEFRFSVRADNADERLTVKAFERGL 515 Query: 456 IGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFK-----QDGKTRTAYEFLSY 510 + RR R + + ++ + +S LT + + +K +GK TA L Sbjct: 516 VDSRRVSRLEQRNEAIADIKKIFESKRLTPTEWNE-QLGYKVFPRLVEGKM-TAAHMLLV 573 Query: 511 PDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDY 570 LF+ P+ K+ +I R+ E Y Y ++ + ++ +E +P++ DY Sbjct: 574 KGIDDDLLFATMPELSKYPPRLILRVTTEYRYKMYLDKERQQIASVERDESLKLPENLDY 633 Query: 571 SSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKN 616 S+ L E + L ++P L QA +IEG++ + LL Y+ KN Sbjct: 634 MSMAGLKIEYRTVLDKVRPATLGQAKRIEGISNSVCFYLLKYVHKN 679 >gi|315039280|ref|YP_004032848.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus amylovorus GRL 1112] gi|325957754|ref|YP_004293166.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus acidophilus 30SC] gi|312277413|gb|ADQ60053.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus amylovorus GRL 1112] gi|325334319|gb|ADZ08227.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus acidophilus 30SC] gi|327184387|gb|AEA32834.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus amylovorus GRL 1118] Length = 632 Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust. Identities = 265/617 (42%), Positives = 360/617 (58%), Gaps = 11/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAA +A +G T L+T + M CNP++GG KG +VREIDAL Sbjct: 10 YDVIVVGAGHAGCEAALASAHMGQKTLLLTIGLDMVAFMPCNPSVGGPAKGTVVREIDAL 69 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ DA IQ R+LN KGPAVR R QAD+ Y M+ I + NL + Q V Sbjct: 70 GGQMGKNIDATYIQMRMLNTGKGPAVRALRAQADKWQYHEHMKDTIENTPNLTLRQAIVD 129 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + ++ + +VVLTTGT RG I IG+L +G +PS L + Sbjct: 130 EVVVEDGVCKGVITNTGAKYHAKSVVLTTGTAARGKIIIGELTYSSGPNNTTPSIKLSEN 189 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--NRQIECGIT 243 K F R KTGTP R++G TI + KTE++ D+ FSF T QI C +T Sbjct: 190 LEKLGFKLRRFKTGTPPRVNGNTIDYSKTEEEPGDKTPRHFSFETKDADYLQHQISCWMT 249 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II N+ + +++G IK GPRYCPSIEDK+VRF +++ HQIFLEPEG T Sbjct: 250 YTNPTTHEIIRNNLDRAPMFTGVIKGVGPRYCPSIEDKVVRFADKDRHQIFLEPEGETTK 309 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY ST++PEE+Q + + ++ GLE ++RPGYAIEYD + P +L TLETK + L Sbjct: 310 EVYVGDFSTSMPEEVQLKMVHSVAGLEHAEMMRPGYAIEYDVVEPWQLKHTLETKNVKHL 369 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ+NGT+GYEEAA QGL+AGIN+A + R D+YIGV+IDDL +KG EP Sbjct: 370 FTAGQMNGTSGYEEAAGQGLIAGINAALSAQNKPGFTLGRNDAYIGVLIDDLVTKGTNEP 429 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT G +LG I + R KRF + Q + L + + Sbjct: 430 YRLLTSRAEYRLILRTDNADLRLTEYGHELGLISDERYKRFEEKKQAIKKAKERLHEITV 489 Query: 484 TSKNLSSTSISF-KQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 +L+ F K G+ A FL P+ I ++ + + V E+++ Sbjct: 490 ---HLTDEVQDFLKSIGQEPMKAGVKADVFLRRPNVKIADIERLTGEKIPGDRYVKEQVE 546 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I YA Y ++ +K +E + IP D DY ++ L+ E ++K ++P L QA + Sbjct: 547 IGIKYAGYIKKEETRIARLKRQEAKKIPADIDYEAIEGLATEARQKFEKIRPETLAQAER 606 Query: 598 IEGMTPAALNLLLIYIK 614 I G+ PA L +L +YI+ Sbjct: 607 ISGVNPADLAILSVYIQ 623 >gi|255037550|ref|YP_003088171.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Dyadobacter fermentans DSM 18053] gi|254950306|gb|ACT95006.1| glucose inhibited division protein A [Dyadobacter fermentans DSM 18053] Length = 620 Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust. Identities = 268/618 (43%), Positives = 374/618 (60%), Gaps = 6/618 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIV+G GHAGCEAAA AA +G+S LIT TI MSCNPA+GG+ KG +VREID Sbjct: 3 QEYDVIVVGAGHAGCEAAAAAATMGSSVLLITMNMHTIAQMSCNPAMGGVAKGQIVREID 62 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G G V+D IQFR+LN+ KGPA+ PR Q+DR + + + + N+D Q Sbjct: 63 ALGGQSGIVSDKTMIQFRMLNLSKGPAMWSPRCQSDRVRFAEEWRSILENNPNVDFWQDT 122 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 E + +V IR VVLT GTFL G+IHIG+ GR G+ + L Sbjct: 123 AKNIIVEDGKVCGVVTSLGIQIRSKAVVLTNGTFLNGLIHIGEKNFGGGRTGEKSATGLT 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + F+ GR+KTGTP R+DG+++ + K E+Q DE FS+ K +Q C IT Sbjct: 183 EQLVTLGFEAGRMKTGTPPRVDGRSLDYSKMEEQPGDEVPAKFSYTDTKPLAKQRSCWIT 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN E H ++ + S ++SG IK GPRYCPS+EDKI RF +++ HQIF+EPEG +T Sbjct: 243 YTNQEVHDVLKTGFEKSPMFSGRIKGLGPRYCPSVEDKINRFADKDRHQIFVEPEGWDTV 302 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY NG ST+LPE++Q+ +R IPG E + RPGYAIEYDY P +L TLET + L Sbjct: 303 EVYVNGFSTSLPEDVQYAALRKIPGFENAKMFRPGYAIEYDYFPPTQLKSTLETHLVKNL 362 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAA QGL+AGIN+ R N LD R+++YIGV+IDDL +KG EP Sbjct: 363 FFAGQINGTTGYEEAACQGLMAGINAHRNVNDLDPFVLKRSEAYIGVLIDDLINKGTEEP 422 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR LR DNAD RLT G ++G + R + K +E + + L + L Sbjct: 423 YRMFTSRAEYRTLLRQDNADLRLTEKGYEIGLASDERVEAVRKKKRETEEVIAKLNATKL 482 Query: 484 TSKNLSST--SISFKQDGKTRTAYEFLSYPDFSIQNLFS----ICPDARKFSSLVIERLQ 537 T ++ +I Q + + L P SI L + ++++ +++ + Sbjct: 483 TPDEINPALEAIGTAQIREKIAVAQLLRRPQISIDQLLEASAVVTELLAEYANDSVQQAE 542 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I Y +Y ++M+ ++ E I ++F+Y + +LS E +EKL +P + QAS+ Sbjct: 543 INLKYDSYIEKEMLLVDKMNKLENLAIVENFNYDGVTSLSFEGREKLKRTRPSTIGQASR 602 Query: 598 IEGMTPAALNLLLIYIKK 615 I G++P+ +++L++YI + Sbjct: 603 ISGVSPSDISVLMLYIGR 620 >gi|256851669|ref|ZP_05557057.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus jensenii 27-2-CHN] gi|260661614|ref|ZP_05862526.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus jensenii 115-3-CHN] gi|282934248|ref|ZP_06339525.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus jensenii 208-1] gi|297205278|ref|ZP_06922674.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus jensenii JV-V16] gi|256615627|gb|EEU20816.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus jensenii 27-2-CHN] gi|260547671|gb|EEX23649.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus jensenii 115-3-CHN] gi|281301722|gb|EFA93989.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus jensenii 208-1] gi|297149856|gb|EFH30153.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus jensenii JV-V16] Length = 634 Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust. Identities = 263/617 (42%), Positives = 361/617 (58%), Gaps = 9/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAA +AK+G T LIT + M CNP++GG KG +VREIDAL Sbjct: 10 YDVIVVGAGHAGCEAALASAKMGQKTLLITISLDMVAFMPCNPSVGGPAKGTVVREIDAL 69 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ DA IQ R+LN KGPAVR R QAD+ Y M+R I NL + Q V Sbjct: 70 GGQMGKNIDATYIQMRMLNTGKGPAVRALRAQADKVQYHETMKRTIEDTPNLTLRQATVD 129 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + +V + +VVLTTGT RG I IG+L +G + L + Sbjct: 130 ELIVEDGVCHGVVTNTGAKYLAKSVVLTTGTSARGRIIIGELTYSSGPNNTIAAIKLSEN 189 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 K F R KTGTP R++G TI + KTE++ D FSF T + Q+ C +T Sbjct: 190 LEKLGFKLRRFKTGTPPRVNGNTIDFSKTEEEPGDSEPRHFSFETKDEDYLKDQLSCWMT 249 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH+II +N+ + +Y+G I+ GPRYCPSIE KIVRF ++ HQIFLEPEG +TD Sbjct: 250 YTNETTHKIIRDNLDRAPMYTGVIEGIGPRYCPSIETKIVRFADKPRHQIFLEPEGKHTD 309 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 Y ST++PEE+Q + +I GLE ++RPGYAIEYD I P +L TLETK I L Sbjct: 310 EYYVGDFSTSMPEEVQQDMVHSIAGLENAEMMRPGYAIEYDVIEPWQLKHTLETKNIKNL 369 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ+NGT+GYEEA QG+VAGIN+A ++ R ++YIGV+IDDL +KG EP Sbjct: 370 FTAGQMNGTSGYEEAGGQGIVAGINAALRAQGKPGFTLGRDEAYIGVLIDDLVTKGTNEP 429 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT G KLG I + R ++F + + L + + Sbjct: 430 YRLLTSRAEYRLLLRNDNADLRLTEYGHKLGLISDERYQKFEEKKAAIKQTLAELYDITI 489 Query: 484 TSKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 + L S S G +A FL P +I + + V E+++I Sbjct: 490 HPNDEVQEYLESIGQSPLNAGLKASA--FLRRPGVTIAAIEKLSGTKLNSDRYVREQVEI 547 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + YA Y +Q ++ ++++ E + IP+ DYS + L+ E ++K ++P ++ QA +I Sbjct: 548 DVKYAGYIKKQELQVQKLRRLESKKIPEGIDYSKIAGLATEARQKFEKIRPESIAQAERI 607 Query: 599 EGMTPAALNLLLIYIKK 615 G+ PA + +L +YI++ Sbjct: 608 SGVNPADIAILTVYIQQ 624 >gi|238926590|ref|ZP_04658350.1| glucose-inhibited division protein A [Selenomonas flueggei ATCC 43531] gi|238885536|gb|EEQ49174.1| glucose-inhibited division protein A [Selenomonas flueggei ATCC 43531] Length = 626 Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust. Identities = 265/620 (42%), Positives = 375/620 (60%), Gaps = 13/620 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YD+IVIG GHAG EAA AA++G T ++T I M CNP++GG GK HLVREIDA Sbjct: 6 NYDIIVIGAGHAGVEAALAAARMGQRTLIVTLSLDNIAMMPCNPSVGGPGKSHLVREIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG AD A IQ R+LN KGPAV R QAD+ LY+ M+ + + ENLDV Q V Sbjct: 66 LGGEMGIAADRASIQRRLLNTGKGPAVHALRMQADKFLYQRIMKETLENTENLDVRQLLV 125 Query: 125 AGFNTEKNI----ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 TE+ ++ +V + + V+L TGT+LRG I +G+ G G P+ Sbjct: 126 TELITEERTGEKRVTGVVCETGERLTAHAVILATGTYLRGRIILGETIYDGGPNGQRPAM 185 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 + S R KTGTPAR+D +T+ +T Q D FSF+TD + + Q C Sbjct: 186 AFSESLRAAGLRLMRFKTGTPARVDRRTLDLAETALQAGDPDAPAFSFLTDAMPDAQTPC 245 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +T TN TH +I N+ + + +G I+ GPRYCPSIE KI RF ++ HQ+FLEPEGL Sbjct: 246 YLTYTNEATHAVIRANLHRAPMANGVIEGIGPRYCPSIETKIARFPDKERHQLFLEPEGL 305 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 +T+ +Y G+ST+LP ++Q +F+RTIPG+ ++RPGYAIEYD ++P +L +L K+I Sbjct: 306 HTNEIYVQGMSTSLPTDVQEEFLRTIPGMHHARMMRPGYAIEYDCLDPLQLEASLAVKEI 365 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 +GL+ AGQ NGT+GYEEAAAQGLVAGIN+AR + + R+D YIGV+IDDL +KG Sbjct: 366 AGLYSAGQANGTSGYEEAAAQGLVAGINAARACMGEEPLILRRSDGYIGVLIDDLVTKGT 425 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRM TSRAEYR+ LR DNAD RLTPIG ++G + + R RF + LL+ Sbjct: 426 EEPYRMMTSRAEYRLVLRQDNADLRLTPIGRRIGLVSDARWARFTAKRGAIDAALRLLRE 485 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSY----PDFSI-QNLFSICPDARKFSSLVIER 535 L+ + ++ RT + D+ + +F + P + V E Sbjct: 486 RRLSPSAETEALLAGAGISPLRTPMTLFALLAREGDYRVLAAVFDLPP----LADDVREE 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I + Y Y +Q + ++ E R IP D DY+++ +L E EKLS ++P + QA Sbjct: 542 VEIMARYDGYIRKQEEQIARMERLEARRIPADTDYAAIGSLRLEAAEKLSAVRPRCIGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G++PA +++LL+Y+++ Sbjct: 602 SRISGVSPADISVLLVYLER 621 >gi|261749197|ref|YP_003256882.1| glucose-inhibited division protein A [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497289|gb|ACX83739.1| glucose-inhibited division protein A [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 624 Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust. Identities = 275/616 (44%), Positives = 378/616 (61%), Gaps = 9/616 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAG EAA+ +AK+G+ T LIT TIG MSCNPAIGG+ KG ++REIDAL Sbjct: 8 YDVIVVGGGHAGAEAASASAKMGSKTLLITTNLQTIGQMSCNPAIGGIAKGQIIREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G G + D + IQFR+LN KGPA+ PR Q DR+L+ + + + LD+ Q V Sbjct: 68 GGNSGIITDYSMIQFRMLNKSKGPAMWSPRAQCDRKLFSNNWRYFLEKNQKLDLYQDTVT 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 +K + ++ + I+ +V+LT GTFL G IHIGK + GR+ + + Sbjct: 128 SLIVKKEKVKGVITSFGTKIKGKSVILTNGTFLNGKIHIGKKIVSGGRIAEQEVKGITEQ 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 F GR+KTGT R+DG+++ + K Q D FSF +Q +C IT T Sbjct: 188 LKSLGFRYGRMKTGTSPRVDGRSLNYHKMGSQEGDLNPKKFSFSNTIKLRKQRKCHITCT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N + H +I +N+K S I++G I+ PRYCPSIE+KI RF ++ H IF+EPEG NT V Sbjct: 248 NKKVHDLIRKNLKFSPIFTGSIQGVSPRYCPSIEEKIYRFTDKEEHHIFVEPEGWNTVEV 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG ST+LPE+IQ Q +R I G EK ++RPGYAIEYDY P +L TLE++ IS LF Sbjct: 308 YINGFSTSLPEKIQSQALRNISGFEKAKMLRPGYAIEYDYFPPIQLKLTLESRLISNLFF 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAAAQGL+AGIN+ K ++ + R+ +YIGV+IDDL +KG EPYR Sbjct: 368 AGQINGTTGYEEAAAQGLIAGINAHLKIHQKEPFILKRSQAYIGVLIDDLITKGTEEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAEYR+ LR DNAD RLT +G K+G I + + K K + S + L Sbjct: 428 MFTSRAEYRMLLRQDNADERLTYMGYKIGLISDGKMKAVDKKKSKVEKCLSFFQKENLKP 487 Query: 486 KNLSSTSISFKQD--GKTRTAYEFLSYPDFSIQNLFSICP------DARKFSSLVIERLQ 537 K ++ I K + LS + I ++ SI P + FS ++E++ Sbjct: 488 KIINPILIEKKSPIISHEKKIDIILSRSEIDIHDIISI-PFLKNKIEKNNFSQEILEQVS 546 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I Y Y R+ AK++ E IP++FDY +P+LS E +EKL+ +P +L QAS+ Sbjct: 547 IRIKYRGYLDREKENAKKLLKLENLKIPENFDYEKIPSLSLEAREKLAYHRPNSLAQASR 606 Query: 598 IEGMTPAALNLLLIYI 613 I G++P+ L++LL+Y+ Sbjct: 607 ISGVSPSDLSILLVYM 622 >gi|58338214|ref|YP_194799.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus acidophilus NCFM] gi|227902599|ref|ZP_04020404.1| glucose-inhibited division protein A [Lactobacillus acidophilus ATCC 4796] gi|81170549|sp|Q5FHQ6|MNMG_LACAC RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|58255531|gb|AAV43768.1| glucose inhibited division protein A [Lactobacillus acidophilus NCFM] gi|227869688|gb|EEJ77109.1| glucose-inhibited division protein A [Lactobacillus acidophilus ATCC 4796] Length = 632 Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust. Identities = 260/614 (42%), Positives = 359/614 (58%), Gaps = 5/614 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAA +A +G T L+T + M CNP++GG KG +VREIDAL Sbjct: 10 YDVIVVGAGHAGCEAALASAHMGQKTLLVTIGLDMVAFMPCNPSVGGPAKGTVVREIDAL 69 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ DA IQ R+LN KGPAVR R QAD+ Y M+ I + NL + Q V Sbjct: 70 GGQMGKNIDATYIQMRMLNTGKGPAVRALRAQADKWQYHEYMKDTIENTPNLTLRQAIVD 129 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + ++ + +VVLTTGT RG I IG+L +G +PS L + Sbjct: 130 ELVVEDGVCKGVITNTGAKYHAKSVVLTTGTAARGKIIIGELMYSSGPNNTTPSIKLSEN 189 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 K F R KTGTP R++G TI + KTE++ D+ FS+ + + QI C +T Sbjct: 190 LEKLGFKLRRFKTGTPPRVNGNTIDYSKTEEEPGDKVPRHFSYESKDENYLQNQISCWMT 249 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH +I +N+ + +++G IK GPRYCPSIEDK+VRF +++ HQIFLEPEG T Sbjct: 250 YTNPVTHEVIRDNLDRAPMFTGVIKGVGPRYCPSIEDKVVRFADKDRHQIFLEPEGKTTK 309 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY ST++PEE+Q + + ++ GLE ++RPGYAIEYD + P +L TLETK + L Sbjct: 310 EVYVGDFSTSMPEEVQLKMVHSVAGLEHAEMMRPGYAIEYDVVEPWQLKHTLETKNVKHL 369 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ+NGT+GYEEAA QGL+AGIN+A + R D+YIGV+IDDL +KG EP Sbjct: 370 FTAGQMNGTSGYEEAAGQGLIAGINAALSAQGKSGFTLGRNDAYIGVLIDDLVTKGTNEP 429 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL-V 482 YR+ TSRAEYR+ LR DNAD RLT G KLG I + R + F + Q ++ L + V Sbjct: 430 YRLLTSRAEYRLILRHDNADLRLTEYGHKLGLISDDRYQAFEEKKQAIKDTQARLHEITV 489 Query: 483 LTSKNLSSTSISFKQDGKTR--TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + + S Q+ A FL P +I ++ + V E+++I Sbjct: 490 HVTDEVQDFLKSIGQEPMKAGVKADVFLRRPHVTINDIERLTGQKIDGDRYVKEQVEIGI 549 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 YA Y ++ +K +E + IP D DY+ + L+ E ++K ++P L QA +I G Sbjct: 550 KYAGYIKKEETRIARLKRQEAKKIPADIDYNMIEGLATEARQKFEKIRPETLAQAERISG 609 Query: 601 MTPAALNLLLIYIK 614 + PA L +L +YI+ Sbjct: 610 VNPADLAILSVYIQ 623 >gi|242214297|ref|XP_002472972.1| predicted protein [Postia placenta Mad-698-R] gi|220727944|gb|EED81849.1| predicted protein [Postia placenta Mad-698-R] Length = 612 Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust. Identities = 254/587 (43%), Positives = 367/587 (62%), Gaps = 27/587 (4%) Query: 33 LITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVR 92 L+T K IG +SCNP++GG+GKG L+RE+DALDGL GRVAD AGIQF++LN KG AV Sbjct: 35 LLTQKLDNIGELSCNPSMGGVGKGTLMREVDALDGLCGRVADQAGIQFQILNRSKGAAVW 94 Query: 93 GPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVL 152 GPR Q DR LY+ MQ + + +LD+ V+ + + I++ +I+CS V++ Sbjct: 95 GPRAQIDRSLYKQHMQAALHNYPSLDIRSASVSDLVFDHDGINAF-SDSGEVIKCSQVII 153 Query: 153 TTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWD 212 TGTFL G IHIG + PAGR+ ++PS L S F GRL+TGTPARL +I + Sbjct: 154 CTGTFLSGEIHIGMKRFPAGRINEAPSVGLSGSLRSAGFQLGRLQTGTPARLYKDSIDFR 213 Query: 213 KTEKQFADERLIPFSFMTDKITN--RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSY 270 E+Q D PFSFM +++N QI C +T T ETH+II +N+ H +++ + K Sbjct: 214 NLEQQRGDSTPHPFSFMNSRVSNANNQIMCYLTYTTPETHQIIRDNL-HQSVHIQETKK- 271 Query: 271 GPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLE 330 GPRYCPS+E K++RF ++N H ++LEPEG +++++YPNG+S ++PEE+Q RT+PGLE Sbjct: 272 GPRYCPSLEAKVIRFPQKNQHVVWLEPEGYDSELIYPNGLSCSMPEEVQLMMYRTVPGLE 331 Query: 331 KVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSA 390 V + RP Y +EYDY++P+EL TLETK+I GLFLAGQINGTTGYEEAAAQG++AGIN+ Sbjct: 332 NVKLARPAYGVEYDYVDPRELKSTLETKRIKGLFLAGQINGTTGYEEAAAQGVLAGINAG 391 Query: 391 RKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIG 450 + + SR D +IG + RMFTSR+EYR+++R DNAD RLT Sbjct: 392 MSALHRAPLVLSRADGFIGEQRNHAN--------RMFTSRSEYRMTIRSDNADLRLTEKA 443 Query: 451 MKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSK--NLSSTSISFKQDGKTRTAYEFL 508 G I + R K+F +E + LLKS VL+ + N+SS +AY+ L Sbjct: 444 RNAGAITDERWKQFEATREELTRVTDLLKSHVLSPQVSNISS------------SAYDML 491 Query: 509 SYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDF 568 + +I+ LF P+ + S ++ R++IE Y + RQ + + +E + Sbjct: 492 RHRSVTIEQLFLAIPELKLVDSRILTRVEIEGIYRTHLRRQEADLRVFLEDEGLTLDPHL 551 Query: 569 DYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 DY + LS+E+KE+L ++P ++ A ++EGMTP ++ LL + K+ Sbjct: 552 DYEIVEGLSSEVKERLYRVRPTSIGVAKRMEGMTPTSIVSLLKFAKR 598 >gi|206603437|gb|EDZ39917.1| Glucose-inhibited division protein A [Leptospirillum sp. Group II '5-way CG'] Length = 605 Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust. Identities = 266/617 (43%), Positives = 371/617 (60%), Gaps = 24/617 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DV++IGGGHAG EAAA ++++G+ T L+T IG MSCNP++GG+GKGH+V EI+A+ Sbjct: 4 WDVVIIGGGHAGIEAAAASSRMGSETLLVTLHLDLIGQMSCNPSVGGIGKGHIVAEIEAM 63 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M ++ADA+G+QF++LN +KG AV+ R Q DR YR + + + NL QGEV Sbjct: 64 GGAMSKLADASGLQFKMLNTRKGYAVQALRVQCDRYRYRQQARLLLENYPNLFFRQGEVV 123 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 G+ + ++++S+++ D + I + VLTTGTFL G +H+G+ + GR G+ ++ L + Sbjct: 124 GWKLKGSLVTSVLLHDETEIFARSFVLTTGTFLSGKLHVGERLVEGGRGGEKNASHLSSR 183 Query: 186 FM-KFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK----ITNRQIEC 240 GRLKTGTP RL GKTI + + Q D + FS D Q C Sbjct: 184 LQGDLGLSVGRLKTGTPPRLSGKTIDFSCMDIQPGDNPPVFFSHNPDNNRFFFDGPQYPC 243 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +T TN +T II EN+ S +YSG IK GPRYCPSIEDKIV+F ER H +F+EPEG Sbjct: 244 YLTSTNHQTADIIRENLSRSPLYSGKIKGIGPRYCPSIEDKIVKFPERQSHHVFIEPEGA 303 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 D YPNGIST+LP ++Q Q + +IPGLE I RPGYA+EYD++ P +L +L+ + Sbjct: 304 GVDEFYPNGISTSLPVDVQEQIVHSIPGLENAQITRPGYAVEYDFVFPDQLDLSLKVAHL 363 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 +FLAGQINGTTGYEEAA QGLVAGIN+ + R SYIGVMIDDL S+GV Sbjct: 364 DNVFLAGQINGTTGYEEAAGQGLVAGINAGLLAKGKMPWIPDRALSYIGVMIDDLVSQGV 423 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAE R+ +R NAD+R+TPIG LG + E + + F K ++ L+ +L+S Sbjct: 424 DEPYRMFTSRAENRLLIRHHNADDRMTPIGQSLGVVPESQWRIFEKKRDSFSQLKKILQS 483 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAY--EFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 KN F Q K + +FL + S ++++ P +F + E Sbjct: 484 HRTDGKN-------FFQALKQPDVHLDDFLEH---SFSDIYASWP---RFWQIGFES--- 527 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E Y Y + +++K E+ IP+ F S P +S E+ +L P +A I Sbjct: 528 EIKYEGYIRISEKKTQDLKGEDYP-IPEGFWNSPPPGISREIFTRLVKASPRTFREAMHI 586 Query: 599 EGMTPAALNLLLIYIKK 615 GMTP AL L +++ Sbjct: 587 RGMTPGALESLRTKLRQ 603 >gi|110639868|ref|YP_680078.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cytophaga hutchinsonii ATCC 33406] gi|122966492|sp|Q11PC8|MNMG_CYTH3 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|110282549|gb|ABG60735.1| glucose-inhibited division protein A [Cytophaga hutchinsonii ATCC 33406] Length = 621 Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust. Identities = 270/619 (43%), Positives = 382/619 (61%), Gaps = 15/619 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAAA AA +G+ L T TI MSCNPA+GG+ KG +VREIDAL Sbjct: 5 YDVIVVGAGHAGCEAAAAAANMGSKVLLATMNMQTIAQMSCNPAMGGVAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GL G V+D + IQFR+LN KGPA+ PR+Q DR ++ + ++ + N+D Q ++ Sbjct: 65 GGLSGIVSDKSMIQFRMLNRSKGPAMWSPRSQNDRHMFAWEWRMQLEALPNVDFWQEMIS 124 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 G + + + I C +VVLT GTFL G+IHIG+ K+ GR G+ + + Sbjct: 125 GLIVKNGKVCGVRTGLGIEIPCKSVVLTNGTFLNGIIHIGEKKLGGGRTGEKAATGITEQ 184 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT-NRQIECGITR 244 ++ F++GR+KTGTP R+DG+++ + ++Q DE FS+ + +Q C IT Sbjct: 185 LVELGFESGRMKTGTPPRVDGRSLDYSVMQEQEGDENPSKFSYSKQTTSLTKQRSCHITY 244 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN H + E S +++G IK GPRYCPS+EDKI RF E+ HQIF+EPEG NT Sbjct: 245 TNQAVHDTLKEGFDRSPMFTGRIKGLGPRYCPSVEDKINRFAEKERHQIFVEPEGWNTVE 304 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY NG ST+LPE++Q++ IR I G E + RPGYAIEYD+ P +L +LET+ + LF Sbjct: 305 VYVNGFSTSLPEDVQYKAIRKIAGFENAKMFRPGYAIEYDFFPPTQLQLSLETRLVKNLF 364 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAA QGL+AGIN+ + + + + R+++YIGV+IDDL +KG EPY Sbjct: 365 FAGQINGTTGYEEAACQGLMAGINAHKAAKDHEALILKRSEAYIGVLIDDLVNKGTEEPY 424 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYRI LR DNAD RLTPIG ++G E R + ++++N L++ + T Sbjct: 425 RMFTSRAEYRILLRQDNADLRLTPIGYEIGLATEERYQDM--LLKKHNS-EKLVEEIKNT 481 Query: 485 SKNLSSTSISFKQDG-----KTRTAYEFLSYPDFSIQNLFSICPDARK-----FSSLVIE 534 + + +++G + Y L P+ + +LF+ + K ++ IE Sbjct: 482 KIKPETANEILEENGSAPIKEKVVLYNLLKRPNMEV-SLFAEKVEEIKTLIEPYTQEEIE 540 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 + IE Y Y ++ A ++ E + DFDY + ALS E +EKLS LKP L Q Sbjct: 541 QAMIEVKYRDYIDKEEQMALKMTQLENMALNPDFDYKKIQALSLEAREKLSKLKPATLGQ 600 Query: 595 ASKIEGMTPAALNLLLIYI 613 AS+I G+ PA +++L+IY+ Sbjct: 601 ASRISGVNPADISILMIYM 619 >gi|317419350|emb|CBN81387.1| 'Protein MTO1 homolog, mitochondrial ' [Dicentrarchus labrax] Length = 692 Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust. Identities = 284/642 (44%), Positives = 394/642 (61%), Gaps = 39/642 (6%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIV+GGGHAG EAAA AA++GA T L+T K TIG++SCNP++GG+GKG LV+E+D Sbjct: 26 QQYDVIVVGGGHAGTEAAAAAARVGAETLLVTQKIHTIGALSCNPSLGGVGKGQLVKEVD 85 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDGL GR D AGI F +LN +KGPAV GPR Q DRE YR +Q E+LS L V++G Sbjct: 86 ALDGLCGRAGDWAGIHFSILNRRKGPAVWGPRAQLDRERYRKFIQSELLSTPRLTVVEGS 145 Query: 124 VAG-FNTEKNI-------ISSIVMQDNS-MIRCSTVVLTTGTFLRGVIHIGKLKIPAGRM 174 V TE N ++ I +++ S I S+V+LTTGTFL G + +G+ P GR+ Sbjct: 146 VEDLLVTEPNPEEPGHHKVTGIRLENGSDPISASSVILTTGTFLTGSLFMGQTMSPGGRI 205 Query: 175 GDSPSNSLFNSFM--KFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM--- 229 GD+PS++ + M + GRL+TGTP R+ ++ + D PFSF+ Sbjct: 206 GDAPSSAGLSRTMRERLGLRIGRLRTGTPPRIVKDSVDLAQAHLHLPDSPPTPFSFLNTH 265 Query: 230 TDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERN 289 T Q+ C +T T R++ E++ + D K GPRYCPSIE +++RF R Sbjct: 266 TRCKPEEQLPCYLTYTTPGVERVVQESLHLNCHIQQDAK--GPRYCPSIESRVLRFPGRK 323 Query: 290 GHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPG----------- 338 HQ++LEPEG+ +D++YP G+S +P +IQ + IR IP + + I PG Sbjct: 324 -HQVWLEPEGVTSDLLYPQGLSMTMPPDIQLRLIREIPAMHRAEIHTPGTRPESCLIACS 382 Query: 339 YAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDC 398 Y ++YD++ P +L P L+ K GLFLAGQINGTTGYEEAAAQGL AG+N+AR + + Sbjct: 383 YGVQYDFVCPTQLSPALQVKSTQGLFLAGQINGTTGYEEAAAQGLWAGVNAARWALSMPA 442 Query: 399 ICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGM-KLGCIG 457 + SRT+SYIGV+IDDL S+GV EPYRMFTSRAE+R SLRPDNAD RLT G ++GC+ Sbjct: 443 VTLSRTESYIGVLIDDLVSRGVTEPYRMFTSRAEFRTSLRPDNADLRLTLKGFEEVGCVS 502 Query: 458 ERRQKRFAKYIQEYNFLRSLLKSLVLTSKN----LSSTSISFKQDGKTRTAYEFLSYPDF 513 R + + + + L+SLVL+S N L I ++G + L Y D Sbjct: 503 SLRYQEAVRVRDSLHEALAALQSLVLSSPNWKKKLPDIHICEAKNG-----MDVLQYSDV 557 Query: 514 SIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSL 573 S + L S P+ +RL+IE+ Y + Q E I+ EE +P+D DY SL Sbjct: 558 SFEMLASAFPECLSPYMEFSQRLKIEAVYKRHCDLQRKEIARIQKEENMSLPQDMDYISL 617 Query: 574 P-ALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIK 614 P +LSNE +E L ++P L A++++G+TPAA+ LL Y++ Sbjct: 618 PVSLSNEAREILDRVRPSTLGAATRLQGITPAAIVHLLHYVR 659 >gi|315453460|ref|YP_004073730.1| glucose inhibited division protein A-like protein [Helicobacter felis ATCC 49179] gi|315132512|emb|CBY83140.1| glucose inhibited division protein A homolog [Helicobacter felis ATCC 49179] Length = 626 Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust. Identities = 273/623 (43%), Positives = 364/623 (58%), Gaps = 27/623 (4%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALD 66 D++V+GGGHAG EAA V AK+GA ++T + SCNPAIGGLGKGHLV+EIDAL Sbjct: 4 DIVVVGGGHAGLEAALVGAKMGARVHMLTLLVDNMALASCNPAIGGLGKGHLVKEIDALG 63 Query: 67 GLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAG 126 G+MG +AD + +Q R+LN KGPAVRG R Q D ++YR+ + L NL V Q Sbjct: 64 GVMGLLADKSALQCRILNASKGPAVRGTRAQIDMDIYRMEARNLALQTPNLSVSQEMAET 123 Query: 127 FNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSF 186 E + + + R V+LTTGTFL+G++HIG + GR G+S S L Sbjct: 124 LLLEGGAVVGVQTHIGKIYRAKKVILTTGTFLQGLVHIGTHQSQNGRFGESASIELSKHL 183 Query: 187 MKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTN 246 GRLKTGT RL G +I + + E + D FS T Q+ C +T TN Sbjct: 184 SALGLQVGRLKTGTCPRLAGASIDFSQLEPHYGDSIPPKFSHKTHNFNPTQLPCYLTYTN 243 Query: 247 LETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVY 306 TH II N+ + ++SG I+S GPRYCPSIEDKI RF ++ HQ+FLEP+ + Y Sbjct: 244 PNTHAIIEANLHQAPMFSGQIESVGPRYCPSIEDKICRFKDKERHQLFLEPQTRSASEYY 303 Query: 307 PNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLA 366 NG+ST+LP EIQ Q I +I GLE I R GYAIEYD++ P +L TLETKKI L+LA Sbjct: 304 VNGLSTSLPFEIQEQVIHSIKGLENAQITRYGYAIEYDFVQPTQLQHTLETKKIPNLYLA 363 Query: 367 GQINGTTGYEEAAAQGLVAGINS-------ARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 GQINGTTGYEEAAAQGL+AGIN+ A+KS +R ++YIGVMIDDL KG Sbjct: 364 GQINGTTGYEEAAAQGLMAGINAALGLGLGAQKS-----FVLARNEAYIGVMIDDLVCKG 418 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCI-GERRQKRFAKYIQEYNFLRSLL 478 EPYRMFT+RAEYR+ LR DNA RL LG + Q+ A+ Q L +L Sbjct: 419 TQEPYRMFTARAEYRLLLREDNARLRLGAHAHALGLMRASEYQELQAQQEQINQALHTLQ 478 Query: 479 KSLVLTSKN-------LSSTSISFKQDGKTRTAYEFLSYPD-FSIQNLFSICPDARKFSS 530 + + +K L+ T I+ K +G FL+ D F +L + R S Sbjct: 479 HTTITPNKQTLEKLQALNQTPINDKCNGV------FLAGRDGFEEADLRAFFECLRNLDS 532 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 +V+E+++I Y +Y +Q +++ + IP DF++ + L E EKLS +P Sbjct: 533 VVLEQVKITCKYHSYIEKQSESIAKMQNLGESKIPSDFNFEKITGLGLEAIEKLSKHRPQ 592 Query: 591 NLLQASKIEGMTPAALNLLLIYI 613 LL+AS I G+TPA + +L +Y+ Sbjct: 593 TLLEASYISGITPANIEVLQLYL 615 >gi|282879091|ref|ZP_06287851.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prevotella buccalis ATCC 35310] gi|281298825|gb|EFA91234.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prevotella buccalis ATCC 35310] Length = 626 Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust. Identities = 260/626 (41%), Positives = 359/626 (57%), Gaps = 11/626 (1%) Query: 1 MINRS--YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHL 58 MIN YDVI+IGGGHAGCEAA +A +GAST LIT + +G MSCNPAIGG+ KG + Sbjct: 1 MINMKFKYDVIIIGGGHAGCEAATASANIGASTCLITMDMNKVGQMSCNPAIGGIAKGQI 60 Query: 59 VREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLD 118 VREIDAL G MG + DA IQFR+LN KGPAV PR Q DR Y ++ + + NLD Sbjct: 61 VREIDALGGQMGLITDATAIQFRMLNKGKGPAVWSPRAQCDRGKYIWEWRKVLDNTPNLD 120 Query: 119 VIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSP 178 + Q E E + R +VV+T GTFL G++HIG+ ++P GR + Sbjct: 121 IWQDEARELIVENGEAVGVNTVWGVEFRAKSVVITAGTFLNGLMHIGRHQLPGGRCAEPA 180 Query: 179 SNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQI 238 L S + R+KTGTP R+D +T+ ++ E+Q + FS+M + +Q+ Sbjct: 181 VYHLSESISRHGIRVDRMKTGTPVRIDARTVHFEDMERQDGENDFHQFSYMGEPRKLKQL 240 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C TN E H ++ + + S +++G I+S GPRYCPS+E K+V F +++ H +FLEPE Sbjct: 241 PCWTCYTNQECHEVLRQGLSDSPLFNGQIQSTGPRYCPSVETKLVTFPDKDQHPLFLEPE 300 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 G T+ +Y NG S+++P IQ + I IP I R GYAIEYDY +P +L TLE+K Sbjct: 301 GECTNEMYLNGFSSSMPLHIQLEAIHKIPAFRDAKIYRAGYAIEYDYFDPTQLKRTLESK 360 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 + GLFLAGQ+NGTTGYEEAA QGLVAG+N+A + R +SYIGV+IDDLT+K Sbjct: 361 VLKGLFLAGQVNGTTGYEEAAGQGLVAGVNAALHCTNSEPFIMHRDESYIGVLIDDLTTK 420 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 GV EPYRMFTSRAEYRI LR D+AD RLT +LG R + + + L Sbjct: 421 GVDEPYRMFTSRAEYRILLRQDDADARLTEKAYQLGLANRERYDWWMEKKESIKALLDFC 480 Query: 479 KSLVLTSKNLSS--TSISFKQDGKTRTAYEFLSYPDFS-------IQNLFSICPDARKFS 529 + K +++ SI T + + P S I L + R Sbjct: 481 NQTPIKPKEINNFLESIGTSPLHGTSKISDLVGRPQVSLTQLAEHITTLKEMLNKPRNRK 540 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 + E +I+ Y Y R+ + A+++ I F YS L LS E ++KL + P Sbjct: 541 EEIAEATEIKIKYKGYIEREKLMAEKMHRLRDIKIKGRFQYSELHELSTEARQKLERIDP 600 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKK 615 L QAS+I G++P+ +N+LL+ + + Sbjct: 601 ETLAQASRIPGISPSDINVLLVLLGR 626 >gi|159030162|emb|CAO91054.1| gidA [Microcystis aeruginosa PCC 7806] Length = 635 Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust. Identities = 263/620 (42%), Positives = 368/620 (59%), Gaps = 17/620 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+G GH+GCEAA A+LG T L+T I CNPA+GG K L E+DAL Sbjct: 13 FDVIVVGAGHSGCEAALACARLGCRTLLLTLNLDKIAWQPCNPAVGGPAKSQLTHEVDAL 72 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G +G++AD +Q RVLN +GPAV R Q D+ Y M+ + +Q NL VI+ +A Sbjct: 73 GGEIGKMADRTYLQKRVLNASRGPAVWALRAQTDKREYAAVMKGIVETQANL-VIREAMA 131 Query: 126 -----GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 G N + + + + V+LTTGTFL G I IG + AGR G+ + Sbjct: 132 TDLILGANEQ---VLGVETYFGTCFAAKAVILTTGTFLGGKIWIGGKSMAAGRAGEFAAV 188 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIE 239 L + + F+TGRLKTGTPAR+D +++ + + E Q D+ + FSF + R Q+ Sbjct: 189 GLTETLNRLGFETGRLKTGTPARVDKRSVDYSRMEPQPPDDEVRWFSFDPEVWIEREQMN 248 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +TRT TH++I +N+ S IY G I S GPRYCPSIEDKIVRF ++ HQIF+EPEG Sbjct: 249 CHLTRTTAATHQLIRDNLHLSPIYGGFIDSKGPRYCPSIEDKIVRFADKESHQIFIEPEG 308 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 + +Y G ST LPE +Q +RT+PGLE ++R YA+EYDY+ + +PTL TKK Sbjct: 309 RDIPELYIQGFSTGLPENVQLAMLRTLPGLENCVMLRAAYAVEYDYLPATQCYPTLMTKK 368 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGLVAGIN+AR + + I F R +SY+G ++DDL +K Sbjct: 369 IEGLFCAGQINGTTGYEEAAAQGLVAGINAARFALGKELIVFPREESYLGTLVDDLCTKD 428 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 + EPYRM TSR+EYR+ LR DNAD RLTP+G ++G I +RR + F + ++ N + + Sbjct: 429 LREPYRMLTSRSEYRLVLRSDNADQRLTPLGREIGLIDDRRWQLFQR--KQTNIIAEKER 486 Query: 480 SLVLTSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIE 534 K +I+ +D + + + + L P +L + E Sbjct: 487 LHETRIKERDQVAIAIVKDTEQKIKGSLSLADLLRRPSLHYLDLDRYGLGNPDINLAERE 546 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 ++IE Y+ Y RQ + +I R + D DY + LS E +EKL+ +KP + Q Sbjct: 547 GVEIEIKYSGYLKRQQNQIDQISRHSNRHLSPDIDYMKIETLSMESREKLTKIKPATIGQ 606 Query: 595 ASKIEGMTPAALNLLLIYIK 614 AS+I G+ PA +N LL+Y++ Sbjct: 607 ASRIGGVNPADINALLVYLE 626 >gi|320537815|ref|ZP_08037736.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Treponema phagedenis F0421] gi|320145354|gb|EFW37049.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Treponema phagedenis F0421] Length = 629 Score = 479 bits (1234), Expect = e-133, Method: Compositional matrix adjust. Identities = 259/624 (41%), Positives = 380/624 (60%), Gaps = 17/624 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAG EAA AA++G T LIT +IG +SCNP+IGG+ KG++VREIDAL Sbjct: 8 YDVIVVGGGHAGIEAALAAARMGEQTLLITQTIDSIGRLSCNPSIGGISKGNIVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG++ADA IQ+R+LN +GPAV+ PR QAD+ LY + + Q+NL + Q V Sbjct: 68 GGEMGKLADACMIQYRLLNKSRGPAVQSPRIQADKFLYAQKAKHALELQKNLHIYQDTVV 127 Query: 126 GF---------NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGD 176 E + +I+ I VVL+TGTF+ G I+IG+ + GR+G+ Sbjct: 128 DVLSSGTSETGTVESGAVQAILTARGRTISAKAVVLSTGTFMEGKIYIGEYEAAEGRLGE 187 Query: 177 SPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR 236 + L ++ + F GRLKTGTP R+ K++ K E Q AD + PFSF ++ Sbjct: 188 KAAIGLGSALAQKGFTLGRLKTGTPCRVLRKSVDLSKMEIQEADAIMRPFSFAAAEVHRP 247 Query: 237 QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLE 296 Q C I TN THRII EN S ++SG I++ G RYCPS+EDK+ +F ERN HQI++E Sbjct: 248 QATCYIAYTNEHTHRIIRENFHRSPLFSGKIQATGARYCPSVEDKVKKFPERNRHQIYIE 307 Query: 297 PEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLE 356 PEGL+T+ +Y NG+S++LPE++Q IRTI G E V I RPGYA++Y Y++P +L L+ Sbjct: 308 PEGLDTEELYINGLSSSLPEDVQDAMIRTIEGFESVVITRPGYAVDYAYVSPLQLGADLQ 367 Query: 357 TKKISGLFLAGQINGTTGYEEAAAQGLVAGINS-----ARKSNK-LDCICFSRTDSYIGV 410 T +I GLF AGQ NGT+GYEEA QG++AGIN+ A+K+ K + R ++YIGV Sbjct: 368 THRIKGLFTAGQTNGTSGYEEAGGQGIIAGINAALYSRAQKTQKPYEPFVLGRDEAYIGV 427 Query: 411 MIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQE 470 MIDDL ++GV EPYRMFT+RAEYR+ LR D AD RLT +G + R I+E Sbjct: 428 MIDDLITQGVDEPYRMFTARAEYRLKLRHDTADERLTEKAYAIGLQTDSAVHRVRDKIKE 487 Query: 471 YNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS 530 + + + ++L +TS + GKT + L P + + ++ A + + Sbjct: 488 RSGIIAHWQTLRITSTQAEANPELQSHIGKTFA--QTLQDPTVPLSLIVNLDVQAAEHNE 545 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 ++ ++E Y Y Q ++++ E IP +F Y+++ LS E + +L ++P Sbjct: 546 EILHAAELEIRYEHYIIAQNKRIEKMRKMENTKIPPNFSYANISGLSTESRTRLEKVRPE 605 Query: 591 NLLQASKIEGMTPAALNLLLIYIK 614 + QA++I+G+ P+ + LL++ ++ Sbjct: 606 TIGQAARIQGIRPSDIMLLMVQLR 629 >gi|116334861|ref|YP_796388.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus brevis ATCC 367] gi|122268460|sp|Q03N65|MNMG_LACBA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|116100208|gb|ABJ65357.1| tRNA uridine 5-carboxymethylaminomethyl modification FAD-utilizing enzyme [Lactobacillus brevis ATCC 367] Length = 636 Score = 479 bits (1234), Expect = e-133, Method: Compositional matrix adjust. Identities = 265/627 (42%), Positives = 365/627 (58%), Gaps = 16/627 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIV+G GHAG EAA AA++G T L+T + M CNP++GG KG +VREID Sbjct: 10 QDYDVIVVGAGHAGSEAALAAARMGNRTLLMTINLDMVAFMPCNPSVGGPAKGIVVREID 69 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G MGR D +Q R+LN KGPAVR R QAD+ Y M+ I + NL + QG Sbjct: 70 ALGGEMGRNIDKTYVQMRMLNTGKGPAVRALRAQADKHAYHAEMKHTIEREPNLTLRQGI 129 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E ++ + R VV+ GT RG I IG+L +G P+ L Sbjct: 130 VDDLIVEDGECQGVITNTGARYRAKAVVIAAGTAARGKIIIGELMYSSGPNNSQPATKLT 189 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT----NRQIE 239 + K+ FD R KTGTP R+DG TI +D+TE+Q D FSF T Q+ Sbjct: 190 ANLPKYGFDLERFKTGTPPRVDGNTIHYDETEEQPGDVEPNHFSFTTPDSAYLDLKNQLS 249 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +T TN +TH II N+ + +++G I+ GPRYCPSIEDKIVRF ++ HQ+FLEPEG Sbjct: 250 CWLTYTNEKTHEIIKANLDRAPMFTGVIEGVGPRYCPSIEDKIVRFADKPRHQLFLEPEG 309 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 TD Y G+ST++PEE+Q + + +I GLE ++RPGYAIEYD ++P +L PTLETK Sbjct: 310 RKTDEWYVQGLSTSMPEEVQQKILHSIKGLEDAQMMRPGYAIEYDVVSPYQLRPTLETKP 369 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 + LF AGQ NGT+GYEEAA QGL+AGIN+ ++ R+D+YIGVM+DDL +KG Sbjct: 370 LKNLFTAGQTNGTSGYEEAAGQGLLAGINAGLRALGKPGFTLKRSDAYIGVMVDDLVTKG 429 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYR+ TSRAEYR+ LR DNAD RLT G +LG I + +R+A ++ + L++ L Sbjct: 430 TKEPYRLLTSRAEYRLILRHDNADLRLTAKGHELGLISD---ERYADFLAKKATLQAELD 486 Query: 480 SL--VLTSKN------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL 531 L + N + S QDG A+ Y D+ F P+ + Sbjct: 487 RLNQIRIKPNDEINAFVESHGDKPLQDGVLAAAFLRRPYVDYQTLLQFIDAPE-QPLDRH 545 Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 +IE ++I YA Y + ++K E + IP DY ++ L+ E +KL ++P Sbjct: 546 IIEEIEISLKYAGYIKKAEENVAKLKRMEAKAIPAQIDYDAIDGLATEAHQKLKKIQPET 605 Query: 592 LLQASKIEGMTPAALNLLLIYIKKNTV 618 L QAS+I G+ PA + +L +YI++ + Sbjct: 606 LAQASRISGVNPADIAILSVYIEQGKI 632 >gi|184154470|ref|YP_001842811.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus reuteri JCM 1112] gi|183225814|dbj|BAG26331.1| cell division protein [Lactobacillus reuteri JCM 1112] Length = 641 Score = 479 bits (1234), Expect = e-133, Method: Compositional matrix adjust. Identities = 267/623 (42%), Positives = 370/623 (59%), Gaps = 15/623 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+G GHAG EAA AA++G T L+T + M CNP++GG KG +VREIDA Sbjct: 13 SYDVIVVGAGHAGSEAALAAARMGNKTLLVTINLEMVAFMPCNPSVGGPAKGIVVREIDA 72 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG D +Q R+LN KGPAVR R QAD+ Y AM++ I + NL + Q V Sbjct: 73 LGGEMGHNIDKTYVQMRMLNTGKGPAVRALRAQADKHAYHRAMKQTIEEEPNLTLRQATV 132 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ + TVVLT GT RG I IG+L+ +G + L Sbjct: 133 DQLIVEDGVCKGVITNTGARYHAKTVVLTVGTAARGKIIIGELQYESGPNNSKSAVKLSE 192 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT----NRQIEC 240 + + FD R KTGTP R++GKTI + TE+Q D+ FSF T + Q+ C Sbjct: 193 NLEELGFDLERFKTGTPPRVNGKTIDYSVTEEQPGDKEPHHFSFDTPDSAYIPISEQLSC 252 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +T TN TH II EN+ + ++SG IK GPRYCPSIEDKIVRF ++ HQ+FLEPEG Sbjct: 253 WLTYTNEGTHAIIRENLSRAPMFSGVIKGVGPRYCPSIEDKIVRFADKPRHQVFLEPEGR 312 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 +TD Y +GIST++PEEIQ + + +I GLE ++RPGYAIEYD + P +L PTLETK I Sbjct: 313 DTDEYYLDGISTSMPEEIQQKIVHSIKGLENAEMMRPGYAIEYDVVAPYQLHPTLETKII 372 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 L+ AGQ NG++GYEEAA QGL+AGIN+ ++ R+D+YIGVMIDDL +KG Sbjct: 373 KNLYTAGQTNGSSGYEEAAGQGLIAGINAGLRAQGKKPFVLKRSDAYIGVMIDDLVTKGT 432 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYR+ TSRAEYR+ LR DNAD RL +G +G + + +R AK ++ + + +K Sbjct: 433 KEPYRLLTSRAEYRLILRHDNADFRLMEMGHHVGLVSD---ERLAKMEEKKRQVAAEIKR 489 Query: 481 LVLTSKNLSSTSIS--FKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARK-FSSLV 532 L S ++ + G R A + L P F Q L P + V Sbjct: 490 LEEIKLKPSDDKVNEFIEAHGDNRLKDGIAAADLLKRPYFDYQTLAEFIPAPEQDLDRHV 549 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 IE+++I+ YA Y ++ ++ + +K E + IP D DY + L+ E ++KL ++P L Sbjct: 550 IEQVEIQLKYAGYIKKEEVKVERMKRMEAKRIPDDIDYGDIDGLATEGRQKLEKIRPETL 609 Query: 593 LQASKIEGMTPAALNLLLIYIKK 615 QAS+I G+ PA + +L +Y+++ Sbjct: 610 AQASRISGVNPADIAILSVYVRQ 632 >gi|148545138|ref|YP_001272508.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus reuteri DSM 20016] gi|227364301|ref|ZP_03848394.1| glucose-inhibited division protein A [Lactobacillus reuteri MM2-3] gi|325683500|ref|ZP_08163016.1| glucose inhibited division protein A [Lactobacillus reuteri MM4-1A] gi|148532172|gb|ABQ84171.1| glucose inhibited division protein A [Lactobacillus reuteri DSM 20016] gi|227070614|gb|EEI08944.1| glucose-inhibited division protein A [Lactobacillus reuteri MM2-3] gi|324977850|gb|EGC14801.1| glucose inhibited division protein A [Lactobacillus reuteri MM4-1A] Length = 647 Score = 479 bits (1233), Expect = e-133, Method: Compositional matrix adjust. Identities = 267/623 (42%), Positives = 370/623 (59%), Gaps = 15/623 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+G GHAG EAA AA++G T L+T + M CNP++GG KG +VREIDA Sbjct: 19 SYDVIVVGAGHAGSEAALAAARMGNKTLLVTINLEMVAFMPCNPSVGGPAKGIVVREIDA 78 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG D +Q R+LN KGPAVR R QAD+ Y AM++ I + NL + Q V Sbjct: 79 LGGEMGHNIDKTYVQMRMLNTGKGPAVRALRAQADKHAYHRAMKQTIEEEPNLTLRQATV 138 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ + TVVLT GT RG I IG+L+ +G + L Sbjct: 139 DQLIVEDGVCKGVITNTGARYHAKTVVLTVGTAARGKIIIGELQYESGPNNSKSAVKLSE 198 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT----NRQIEC 240 + + FD R KTGTP R++GKTI + TE+Q D+ FSF T + Q+ C Sbjct: 199 NLEELGFDLERFKTGTPPRVNGKTIDYSVTEEQPGDKEPHHFSFDTPDSAYIPISEQLSC 258 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +T TN TH II EN+ + ++SG IK GPRYCPSIEDKIVRF ++ HQ+FLEPEG Sbjct: 259 WLTYTNEGTHAIIRENLSRAPMFSGVIKGVGPRYCPSIEDKIVRFADKPRHQVFLEPEGR 318 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 +TD Y +GIST++PEEIQ + + +I GLE ++RPGYAIEYD + P +L PTLETK I Sbjct: 319 DTDEYYLDGISTSMPEEIQQKIVHSIKGLENAEMMRPGYAIEYDVVAPYQLHPTLETKII 378 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 L+ AGQ NG++GYEEAA QGL+AGIN+ ++ R+D+YIGVMIDDL +KG Sbjct: 379 KNLYTAGQTNGSSGYEEAAGQGLIAGINAGLRAQGKKPFVLKRSDAYIGVMIDDLVTKGT 438 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYR+ TSRAEYR+ LR DNAD RL +G +G + + +R AK ++ + + +K Sbjct: 439 KEPYRLLTSRAEYRLILRHDNADFRLMEMGHHVGLVSD---ERLAKMEEKKRQVAAEIKR 495 Query: 481 LVLTSKNLSSTSIS--FKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARK-FSSLV 532 L S ++ + G R A + L P F Q L P + V Sbjct: 496 LEEIKLKPSDDKVNEFIEAHGDNRLKDGIAAADLLKRPYFDYQTLAEFIPAPEQDLDRHV 555 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 IE+++I+ YA Y ++ ++ + +K E + IP D DY + L+ E ++KL ++P L Sbjct: 556 IEQVEIQLKYAGYIKKEEVKVERMKRMEAKRIPDDIDYGDIDGLATEGRQKLEKIRPETL 615 Query: 593 LQASKIEGMTPAALNLLLIYIKK 615 QAS+I G+ PA + +L +Y+++ Sbjct: 616 AQASRISGVNPADIAILSVYVRQ 638 >gi|239617771|ref|YP_002941093.1| glucose inhibited division protein A [Kosmotoga olearia TBF 19.5.1] gi|239506602|gb|ACR80089.1| glucose inhibited division protein A [Kosmotoga olearia TBF 19.5.1] Length = 634 Score = 479 bits (1233), Expect = e-133, Method: Compositional matrix adjust. Identities = 261/620 (42%), Positives = 373/620 (60%), Gaps = 15/620 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++D++VIG GHAG EA AAK+G T ++ T+G CNPA+GG KG + RE+DA Sbjct: 9 NFDIVVIGAGHAGIEAGLAAAKMGLKTLVLAINLDTVGWAPCNPAVGGPAKGIVAREVDA 68 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G + + DA I R+LN KGPAVR R Q D+ Y + M+R + SQENL + G Sbjct: 69 LGGQIAKTTDATMINVRMLNTSKGPAVRALRAQIDKHEYSMEMKRILESQENLFIRSGIA 128 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + E ++ +V + RC V+T+GTFLRG I +G+ AGR+G+ P+ +L Sbjct: 129 SEILVENGKVTGVVTHFGVVYRCRAAVVTSGTFLRGKIFVGQKVFEAGRLGEFPAKALSQ 188 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGIT 243 S F R KTGTPAR+ GK+I + K E+Q + + FS+ + ++ + C +T Sbjct: 189 SLETLGFTLSRFKTGTPARIQGKSIDFSKMERQDTSDEPLAFSYFDEPRVLPKDYPCWLT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIK---SYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 TN TH +I ++K S +Y GD+K S GPRYCPSIEDK+V+F + HQ+F+EPEG Sbjct: 249 HTNPSTHAVIRRDLKFSPLY-GDVKLIQSIGPRYCPSIEDKVVKFSSKESHQVFVEPEGK 307 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 NTD Y NG+ST+LP E Q + IRT+PGLE I+RP YA+EYDY+ P +L+PTLE+K + Sbjct: 308 NTDEYYLNGLSTSLPFETQVEMIRTVPGLENAVIVRPAYAVEYDYVTPDQLYPTLESKLV 367 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 L+ AGQ+ GT+GYEEAA G+VAGIN+A K ++ R++SYIGVMIDDL +KGV Sbjct: 368 ENLYFAGQVIGTSGYEEAAGLGIVAGINAAAKLLGMEQFVPKRSESYIGVMIDDLVTKGV 427 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYR+ TSRAEYR+ +R DNA RL+ G K G I + ++ ++ L + Sbjct: 428 DEPYRLLTSRAEYRLLIRHDNAHIRLSKYGYKYGLIPKWFYEKVLDLERQIEGEIERLNN 487 Query: 481 LVLTSKNLSSTSISFKQDG------KTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIE 534 +V+ K LS+ + G TR + + L P S + L P+ + L+ E Sbjct: 488 VVV--KPLSTLNNKLVAAGTSPIYQSTRLS-QLLKRPQVSYEILKEFDPEPIE-DLLLRE 543 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y R E K + E +IP +Y +P LS E +EKL L+P ++ Q Sbjct: 544 QVEIQLKYEGYILRMEQELKRFERLEMEIIPPKVNYDEVPNLSTESREKLKKLRPRSIGQ 603 Query: 595 ASKIEGMTPAALNLLLIYIK 614 A +I G+TPA + L +Y+K Sbjct: 604 AMRIPGITPADIMNLSVYLK 623 >gi|302344817|ref|YP_003813170.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prevotella melaninogenica ATCC 25845] gi|302149647|gb|ADK95909.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prevotella melaninogenica ATCC 25845] Length = 623 Score = 479 bits (1233), Expect = e-133, Method: Compositional matrix adjust. Identities = 262/627 (41%), Positives = 371/627 (59%), Gaps = 25/627 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+VIGGGHAGCEAA AA LGA+T L+T + IG MSCNPA+GG+ KG +VRE+DAL Sbjct: 5 YDVLVIGGGHAGCEAATAAANLGANTCLVTMDMNKIGQMSCNPAVGGIAKGQIVREVDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG V DA IQFR+LN KGPAV PR Q DR + + + +NLD+ Q + Sbjct: 65 GGYMGLVTDATAIQFRMLNRSKGPAVWSPRAQCDRGKFIWEWRTILDHTDNLDIFQDQAD 124 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + I I TV++T GTFL G++HIGK K+ GR + ++ S Sbjct: 125 ELLVENGKVLGIKTIWGIDIYARTVIITAGTFLNGLMHIGKRKVEGGRCAEPAVHNFTES 184 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + R+KTGTP R+D +++ +D+ E Q + FSF Q+ C T Sbjct: 185 ITRHGIRADRMKTGTPVRIDRRSVHFDEMEPQPGETDYHQFSFYGPHRHLPQLPCWTCNT 244 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N E H ++ + S +++G I+S GPRYCPSIE K+V F +++ H +FLEPEG++T+ + Sbjct: 245 NEEAHEVLRRGVADSPLFNGQIQSTGPRYCPSIETKLVTFPDKSSHPLFLEPEGVDTNEM 304 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG S+++P E+Q I IP L I RPGYAIEYDY +P +L +LE+K I GLF Sbjct: 305 YLNGFSSSMPWEVQLDAIHKIPALRDAKIYRPGYAIEYDYFDPTQLKQSLESKVIEGLFF 364 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ+NGTTGYEEA QGLVAGIN+A D +R +SYIGV+IDDLT+KGV EPYR Sbjct: 365 AGQVNGTTGYEEAGGQGLVAGINAALLCAGKDPFVMNRDESYIGVLIDDLTTKGVDEPYR 424 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAEYRI LR D+AD RLT +G +Q R+ ++Q+ + +L TS Sbjct: 425 MFTSRAEYRILLRQDDADARLTERAYNIGIA---KQDRYDWWMQKKEHINRILDFCNNTS 481 Query: 486 ----------KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF------- 528 ++L ++ I G T+ + ++ P + +NL ++ P ++ Sbjct: 482 VKPEVVNGFLEHLGTSPIK----GATKIV-DLVARPQVNFENLSAVIPSLKEAIEASPNR 536 Query: 529 SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 + E +I+ Y Y R+ + A++++ E I F YS L LS E ++KL ++ Sbjct: 537 KEEIAEAAEIKLKYKGYIDRERVFAEKMRRLEDIKIKGHFKYSELHDLSTECRQKLEQIQ 596 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIKK 615 P L QAS+I G++P+ +N+LL+ + + Sbjct: 597 PETLAQASRIPGVSPSDINVLLVLMGR 623 >gi|302653989|ref|XP_003018808.1| hypothetical protein TRV_07168 [Trichophyton verrucosum HKI 0517] gi|291182486|gb|EFE38163.1| hypothetical protein TRV_07168 [Trichophyton verrucosum HKI 0517] Length = 605 Score = 479 bits (1232), Expect = e-133, Method: Compositional matrix adjust. Identities = 250/579 (43%), Positives = 352/579 (60%), Gaps = 23/579 (3%) Query: 58 LVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENL 117 ++REIDALDG+ GR D AGIQFR+LN KGPAV GPR Q DR LY+ M E+ L Sbjct: 1 MIREIDALDGVAGRTVDKAGIQFRILNRSKGPAVWGPRAQIDRSLYKKYMLEELSKTPGL 60 Query: 118 DVIQGEVA----------GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKL 167 ++++G+VA N + I + ++ MI V++TTGTFL G IHIG Sbjct: 61 NIVEGKVADIVISKENMTSLNGSQGEIVGVRLESGEMIPTQKVIITTGTFLGGEIHIGLD 120 Query: 168 KIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFS 227 P+GRMG++ + L S + F GRLKTGTP RLD KTI + E Q D PFS Sbjct: 121 VFPSGRMGEAATFGLSKSLREAGFQLGRLKTGTPPRLDRKTIDFSTLEVQPGDSPPSPFS 180 Query: 228 FMTDKIT---NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVR 284 ++ D + Q+ C TN +H ++ +N+ S + GPRYCPS+E KI+R Sbjct: 181 YLNDSVQIGDKGQLNCWAAHTNEASHAVVRDNLNKSIHIRETVN--GPRYCPSLESKIIR 238 Query: 285 FGERNGHQIFLEPEGLN-TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEY 343 F ++ H I+LEPEGL DV+YPNGIS +P + Q + +RT+ GLE V +++PGY +EY Sbjct: 239 FKDKPRHMIWLEPEGLAPNDVIYPNGISMTIPADAQEKMLRTVRGLENVTMLQPGYGVEY 298 Query: 344 DYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSR 403 DY++P+ L PTLETK I GL+LAGQINGTTGYEEAAAQG++AGIN+ S + SR Sbjct: 299 DYVDPRSLRPTLETKLIGGLYLAGQINGTTGYEEAAAQGIIAGINAGLASQLKPPMTLSR 358 Query: 404 TDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKR 463 D +IG+MIDDL +KGV EPYRMFT+R+EYRIS R DNAD RLT G G + ++R ++ Sbjct: 359 ADGFIGIMIDDLITKGVSEPYRMFTTRSEYRISTRSDNADLRLTAKGRAAGVVSDKRWRQ 418 Query: 464 FAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICP 523 F + ++ ++L++LL++ S S + D R+A+E LS+ S+ ++ Sbjct: 419 FNETKEQMSYLQALLENTKYPSTVWSRKGFPVRTDSSVRSAFELLSHNGVSLDDVIPHIE 478 Query: 524 DA-------RKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPAL 576 A FS + R+ IE YA YT RQ A + +E L+P D DYS++ L Sbjct: 479 SAPGTIHSLSSFSPEIKSRMAIEGRYAPYTKRQEATALLFERDEGMLLPPDIDYSTMLGL 538 Query: 577 SNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 S E ++ L ++P ++ A ++EG+TP LL++++K Sbjct: 539 STEERQVLEKVRPVSIGMARRVEGVTPVGALKLLMHVRK 577 >gi|41058589|gb|AAR99281.1| glucose-inhibited division protein A [Candidatus Blochmannia nearcticus] Length = 590 Score = 479 bits (1232), Expect = e-133, Method: Compositional matrix adjust. Identities = 269/587 (45%), Positives = 367/587 (62%), Gaps = 19/587 (3%) Query: 42 GSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRE 101 G MSCNPAIGG+GKGHLV+EIDA+ GLM D +GIQFR LN KG AVR R QAD+ Sbjct: 1 GQMSCNPAIGGIGKGHLVKEIDAMGGLMACAIDESGIQFRKLNSSKGVAVRATRAQADKI 60 Query: 102 LYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSM-IRCSTVVLTTGTFLRG 160 LYR ++ ++ QE L ++Q V E N I ++ M R +VVLTTGTFL G Sbjct: 61 LYRQVIRNKLEYQECLLIVQASVEDLIIENNKIVGVITPKIGMKFRAMSVVLTTGTFLNG 120 Query: 161 VIHIGKLKIPAGRMGDSPSNSLFNSFMK-FDFDTGRLKTGTPARLDGKTIIWDKTEKQFA 219 I+IG GR GD S+SL + +K GRLKTGT R+ K + +D KQ + Sbjct: 121 RIYIGLNNFSGGRAGDIGSSSLLSIRLKELSSRVGRLKTGTSPRIHSKGVNFDCLHKQHS 180 Query: 220 DERLIPFSFMTDKITN-RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSI 278 D + FSF+ + RQ+ C IT TN +TH I+ N+ S +YSG +K PRYCPSI Sbjct: 181 DNPVPVFSFIGSVEQHPRQVPCYITHTNSKTHDIVRSNLHQSPMYSGLMKGVSPRYCPSI 240 Query: 279 EDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPG 338 EDK+VRF +R+ HQIFLEPEGL T +Y NGIST+LP IQ Q I+++ GLE NIIRPG Sbjct: 241 EDKVVRFSDRSAHQIFLEPEGLTTPEIYLNGISTSLPFNIQIQMIKSVQGLENANIIRPG 300 Query: 339 YAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDC 398 YAIEYD+ +P++L TLE+K ISGLF +GQINGTTGYEEAAAQGL+AGIN+AR S + Sbjct: 301 YAIEYDFFDPRDLKLTLESKFISGLFFSGQINGTTGYEEAAAQGLLAGINAARFSQDKEG 360 Query: 399 ICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGE 458 R +Y+GV++DDL + G EPYRMFTSRAEYR+SLR DNAD RLT I + G I E Sbjct: 361 WYPRRDQAYLGVLVDDLCTHGTEEPYRMFTSRAEYRLSLREDNADLRLTAIAYRFGLIDE 420 Query: 459 -------RRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSS---TSISFKQDGKTRTAYEFL 508 R++++ K +Q + + + +K L++ T ++ + +G + Sbjct: 421 FLWENFCRKKEKIEKELQRLR--NTYIAPHSVDAKQLNALLKTPLTHEINGAELLKRPEI 478 Query: 509 SYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDF 568 SY S ++F + + V ++++I+ Y Y RQ + E L+P + Sbjct: 479 SYIKLSQLSVFGLS----ELDKQVFDQIEIQIKYEGYIRRQQEDIDRYLCNENTLLPINM 534 Query: 569 DYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 D++ + LS E+ EKL+ +P ++ QAS+I G+TPAA++ LL+++KK Sbjct: 535 DFNIVSGLSREVIEKLNQCRPCSIGQASRIPGITPAAISNLLVWLKK 581 >gi|219847173|ref|YP_002461606.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Chloroflexus aggregans DSM 9485] gi|219541432|gb|ACL23170.1| glucose inhibited division protein A [Chloroflexus aggregans DSM 9485] Length = 656 Score = 479 bits (1232), Expect = e-133, Method: Compositional matrix adjust. Identities = 266/645 (41%), Positives = 366/645 (56%), Gaps = 29/645 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAA AA+LG T L+T + MSCNP+IGG KGHLVREIDA+ Sbjct: 5 YDVIVVGAGHAGCEAAHAAARLGCRTLLLTIDLDKLAHMSCNPSIGGPAKGHLVREIDAM 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLMGR+ D + IQ R+LN KGPAV+ R Q D+ LY M+ + NLD+ Q V Sbjct: 65 GGLMGRITDRSAIQIRLLNESKGPAVQSLRAQCDKRLYARLMKETLERVPNLDLRQAMVE 124 Query: 126 GFNTEKNIISSIVMQDNSMIR--CSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 + ++ R V+LTTGTFLRG G+ AGR G++P+ +L Sbjct: 125 RIAPPNADTQCFTVTTHTGWRYLAPAVILTTGTFLRGRAITGEAVWGAGRAGEAPAMALS 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI---------- 233 F RLKTGTP RL TI + TE Q ++ + F ++ Sbjct: 185 EDLAALGFPLVRLKTGTPPRLAAATIDFSLTELQPGSDKPLAFGHYYAELGETIPPPEYH 244 Query: 234 --------------TNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIE 279 Q+ C T E H II +N+ + ++SG I+ GPRYCPSIE Sbjct: 245 GPPAPVYPHPQLNGWRPQLPCYQVHTTPEFHAIIRQNLHRAPLFSGIIEGVGPRYCPSIE 304 Query: 280 DKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGY 339 DKIVRF ++ H +FLEPEG T VY G +T+LPE++Q +R+IP L V ++R GY Sbjct: 305 DKIVRFADKERHSLFLEPEGWTTAEVYVQGCNTSLPEDVQWAMLRSIPALRNVELMRIGY 364 Query: 340 AIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCI 399 AIEYD + E+ ++T+++ GLF AGQINGTTGYEEAAAQGL+AGIN+A + Sbjct: 365 AIEYDAVATGEITADMQTRRLRGLFFAGQINGTTGYEEAAAQGLMAGINAAHYVQGKPPV 424 Query: 400 CFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCI-GE 458 R ++YIGV+IDDLT+K + EPYRMFTSRAEYR+ LR DNAD RLTP+ +LG + G+ Sbjct: 425 ILGRAEAYIGVLIDDLTTKEIREPYRMFTSRAEYRLLLRGDNADLRLTPLAYRLGLVDGD 484 Query: 459 RRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSST--SISFKQDGKTRTAYEFLSYPDFSIQ 516 R + Q L+ + + + S +++ + K + T E L+ PD S + Sbjct: 485 RAAVVEQRRRQAEQALQQMHERCIFPSAAINNALEAQGVKPLNQPATVAEVLARPDVSYR 544 Query: 517 NLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPAL 576 L + PD S V E+++I Y Y RQ E ++ E R IP DFDY++LP L Sbjct: 545 QLRTAIPDLPDLSPSVAEQVEIGCKYRGYIARQEREVARMQKMEHRRIPPDFDYTTLPGL 604 Query: 577 SNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVKLN 621 NE ++ L +P L QA ++ G+ PA + ++L +++ V + Sbjct: 605 RNEARQVLMRFRPATLGQAGRLAGINPADVAIILFALERRQVHTD 649 >gi|294675111|ref|YP_003575727.1| glucose-inhibited division protein A [Prevotella ruminicola 23] gi|294474361|gb|ADE83750.1| glucose-inhibited division protein A [Prevotella ruminicola 23] Length = 637 Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust. Identities = 257/638 (40%), Positives = 375/638 (58%), Gaps = 33/638 (5%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAGCEAA +A +GA T L+T + I MSCNPAIGG+ KG +VREIDAL Sbjct: 5 YDVIVIGGGHAGCEAACASANMGAKTCLVTMDMNKIAQMSCNPAIGGIAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG V DA IQFR+LNV KGPAV PR Q DR + +R I +NLDV Q + Sbjct: 65 GGQMGLVTDATSIQFRMLNVGKGPAVWSPRAQCDRGKFIWEWRRTIDETDNLDVWQDQAD 124 Query: 126 GFNTE------KNIISSIVMQD--NSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 TE I ++ ++ + I ++V+T GTFL G++HIG+ +P GR+ + Sbjct: 125 ELLTEPISGSESGAIRAVGVRTIWGTEIYAKSIVITAGTFLNGLMHIGRKMVPGGRIAEP 184 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ 237 S + R+KTGTP R+D +++ ++ E Q + R FS+M +Q Sbjct: 185 AVPHFTESITRHGVTAARMKTGTPVRIDKRSVHFEDLEVQPGETRPYQFSYMNKGGALKQ 244 Query: 238 IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 + C TN E H I+ + S +Y+G I+S GPRYCPSIE K+V F +R+ H +FLEP Sbjct: 245 LPCWTVNTNAEVHEILKSGLADSPLYNGQIQSIGPRYCPSIETKLVTFPDRDKHPLFLEP 304 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EG +T+ +Y NG S++LP ++Q + ++ +P V + RPGYAIEYD+ +P +L +LE+ Sbjct: 305 EGEDTNEMYLNGFSSSLPMDVQIEALKKMPAFRDVKVYRPGYAIEYDFFDPTQLNHSLES 364 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARK--------SNKLDCICFSRTDSYIG 409 K I GLF+AGQ+NGTTGYEEA QG +AGIN+A K +NK R ++YIG Sbjct: 365 KIIDGLFMAGQVNGTTGYEEAGGQGTLAGINAALKAGCAGSDTANKQ--FVLHRDEAYIG 422 Query: 410 VMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQ 469 V+IDDL +KGV EPYRMFTSRAEYRI LR D+AD RLT +LG + + R + + Q Sbjct: 423 VLIDDLVTKGVDEPYRMFTSRAEYRILLRQDDADARLTEKAYELGIVKKDRYDWWLQKKQ 482 Query: 470 EYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAY-----EFLSYPDFSIQNLFSICPD 524 + + ++ + + ++S + + G T + + ++ P +++NL + P Sbjct: 483 AIEEIEAFCQNFAIKPRLINS---ALEALGTTPLQFGCKLSDLVNRPQLNLKNLSEVIPS 539 Query: 525 ARKF-------SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALS 577 ++ + E +I Y Y R+ + A ++ E I F+Y L LS Sbjct: 540 LKEALDRPSNRKEEIAEAAEIRMKYKGYIERERLVADKMHRLENIRIKGRFNYEELQGLS 599 Query: 578 NELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 E ++KL ++P L QAS+I G++P+ +N+LL+ + + Sbjct: 600 TECRQKLQKIQPETLAQASRIPGVSPSDINVLLVLMGR 637 >gi|5672641|dbj|BAA82679.1| 77%-identity [Bacillus halodurans] Length = 579 Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust. Identities = 252/566 (44%), Positives = 352/566 (62%), Gaps = 4/566 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVIV+G GHAG EA AA++GA+T ++T + M CNP++GG KG +VREIDA Sbjct: 7 EFDVIVVGAGHAGVEAGLAAARMGANTLMLTLNLDAVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M R D IQ R+LN KGPAVR R QAD+ LY+ M++ I +ENL + QG V Sbjct: 67 LGGEMARNIDKTHIQMRMLNTGKGPAVRALRAQADKFLYQHEMKKTIEEEENLLLRQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ + R VV+TTGT+LRG I IG L +G PS +L Sbjct: 127 ERLIIEDGECRGVITNTGAEYRAKAVVVTTGTYLRGKIIIGDLAYESGPNNMQPSINLSY 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F+ R KTGTP R++G+TI +DKTE Q DE FS+ T K Q+ C +T Sbjct: 187 HLQELGFEMVRFKTGTPPRVNGETIDYDKTEIQPGDEVPRAFSYETTKYITDQLPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T +TH+II +N+ S +YSG I+ GPRYCPSIEDKIVRF ++ HQIFLEPEG +T Sbjct: 247 TGDKTHQIINDNLGRSPMYSGMIEGTGPRYCPSIEDKIVRFNDKPRHQIFLEPEGRHTSE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +++IPGLEK ++RPGYAIEYD I P +L+PTLETKK+ GLF Sbjct: 307 VYVQGLSTSLPEDVQLDVLKSIPGLEKARMMRPGYAIEYDAIVPTQLWPTLETKKVPGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QG++AGIN+A + D + R+++YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGIMAGINAALRVQGKDGLILDRSEAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT G ++G I R +RF + + + L+S+ + Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEKGYEIGLIARERYERFCEKKAQIAAEKKRLESITVK 486 Query: 485 SKNLSSTSISFKQDGKTRTAYE---FLSYPDFSIQNLFSICP-DARKFSSLVIERLQIES 540 + + + A + FL P+ + +++ + P ++ S+ V E+++I+ Sbjct: 487 PSKEVNALLEEVGSAPLKEAVQANVFLKRPEVTYEHVAKVIPAPEQELSADVAEQVEIQI 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPK 566 Y Y + + + + K + IP+ Sbjct: 547 KYEGYISKMLQQVERAKKMNDKKIPR 572 >gi|299142032|ref|ZP_07035166.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prevotella oris C735] gi|298576494|gb|EFI48366.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prevotella oris C735] Length = 623 Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust. Identities = 261/622 (41%), Positives = 363/622 (58%), Gaps = 15/622 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+VIGGGHAGCEAAA +A +GA T LIT + I MSCNPA+GG+ KG +VREIDAL Sbjct: 5 YDVLVIGGGHAGCEAAAASANMGAKTCLITMDMNKIAQMSCNPAVGGIAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG V D IQFR+LN+ KGPAV PR Q DR + + + ENLD+ Q + Sbjct: 65 GGNMGIVTDRTAIQFRMLNIGKGPAVWSPRAQCDRGKFIWEWRTTLDHTENLDIWQDQAD 124 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + N + ++V+T GTFL G++H+G+ I GR + + S Sbjct: 125 ELIVKNNEAVGVKTIWGVTFYAKSIVVTAGTFLNGLMHVGRKMIEGGRCAEPAVHHFTES 184 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 ++ + R+KTGTP R+D +T+ +D+ E+Q D FS+M + RQ+ C T T Sbjct: 185 ITRWGITSARMKTGTPIRIDKRTVHFDEMEEQEGDTDFHQFSYMGEHRILRQLSCWTTYT 244 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N E H + E + S +++G I+S GPRYCPSIE K+V F ++ H +FLEPEG +T+ + Sbjct: 245 NKEVHETLREGLTDSPLFNGQIQSTGPRYCPSIETKLVTFPDKEQHPLFLEPEGEDTNEM 304 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG S+++P +IQ I IP V I RPGYAIEYDY +P +L +LE+K + GLF Sbjct: 305 YLNGFSSSMPMDIQLAAIHKIPAFRDVKIYRPGYAIEYDYFDPTQLKHSLESKILPGLFF 364 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ+NGTTGYEEA QG+VAGIN+A + R SYIGV+IDDLT+KGV EPYR Sbjct: 365 AGQVNGTTGYEEAGGQGIVAGINAALHCTGSEPFIMQRDQSYIGVLIDDLTTKGVDEPYR 424 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAEYRI LR D+AD RLT I LG R + + + + L K + + Sbjct: 425 MFTSRAEYRILLRQDDADARLTEIAYDLGIAKRNRYDWWHQKKEAVHRLIHFCKEYPIKA 484 Query: 486 KNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSL-------VI 533 ++S S G T + ++ P ++QNL I P+ ++ + + Sbjct: 485 SEINSQLESL---GTTPLRAGCKLSDLIARPHLTLQNLSEIIPELKEALLMPENRKEEIA 541 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E +I+ Y Y R+ I A ++ E I F YS L +S E ++KL + P L Sbjct: 542 EAAEIQMKYQGYIERERIIADKMHRLENIKIKGRFKYSELQEISTEGRQKLEKIDPETLA 601 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I G++P+ +N+LLI + + Sbjct: 602 QASRIPGVSPSDINVLLILLGR 623 >gi|307564761|ref|ZP_07627289.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prevotella amnii CRIS 21A-A] gi|307346483|gb|EFN91792.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prevotella amnii CRIS 21A-A] Length = 631 Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust. Identities = 266/635 (41%), Positives = 383/635 (60%), Gaps = 33/635 (5%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+VIGGGHAGCEAA AA +GA T L+T + I MSCNPAIGG+ KG +VREIDAL Sbjct: 5 YDVLVIGGGHAGCEAATAAANMGAKTCLLTMDMNKIAQMSCNPAIGGIAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG + DA+ IQFR+LN KGPAV PR Q DR+ Y ++ I + ENL + Q + Sbjct: 65 GGYMGLITDASSIQFRMLNRSKGPAVWSPRAQCDRQKYIDNWRKTIDNTENLYIFQDQAT 124 Query: 126 GFNTEKNIISSIVMQDNSMIR--------CSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 EK+ S Q ++ TV++T GTFL G++HIG ++ GR+ + Sbjct: 125 ELLVEKSNTSKEAAQRVIGVKTIWGIDMYARTVIITAGTFLNGLMHIGNKQVEGGRISEP 184 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ 237 ++ +S ++ R+KTGTP R+D +++ ++ TEKQ D FSF + + Q Sbjct: 185 AVHNFTDSITRWGITVARMKTGTPVRIDKRSVHFEYTEKQPGDSDYHQFSFFGKQRSLPQ 244 Query: 238 IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 + C TN + HRII ++ + I +G I+S GPRYCPSIE K++ F +++ H +FLEP Sbjct: 245 MPCWTFNTNEKAHRIIRNSLSEAPILNGQIQSTGPRYCPSIETKLITFPDKSSHPLFLEP 304 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EG++T+ +Y NG S+++P +IQ + I IP L I RPGYAIEYDY +P +L P+LE+ Sbjct: 305 EGVDTNEMYLNGFSSSMPWDIQIEAIHQIPALSDAKIYRPGYAIEYDYFDPTQLKPSLES 364 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 K I GLF AGQ+NGTTGYEEA QG+VAGIN+A + R +SYIGV+IDDLT+ Sbjct: 365 KIIEGLFFAGQVNGTTGYEEAGGQGIVAGINAANLCSNNQPFIMKRDESYIGVLIDDLTT 424 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQ-------- 469 KGV EPYRMFTSRAEYRI LR D+AD RLT LG +++R+ +++ Sbjct: 425 KGVDEPYRMFTSRAEYRILLRQDDADARLTEKAYTLGIA---KRERYDWWLEKKEHILRI 481 Query: 470 EYNFLRSLLKSLVLTS--KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARK 527 E F + +K + S + + S+ I G T+ + + P+ +I +L +I P ++ Sbjct: 482 ENFFYNNTVKPEYVNSLLEKIGSSPIK----GTTKLI-DLIGRPNVTITDLANILPTLKE 536 Query: 528 F-------SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNEL 580 +IE +I+ Y Y R+ I A+++ E I F+Y+ + LS E Sbjct: 537 CLETCTNRKEEIIEATEIKMKYKGYIERERIFAEKMHRLENIKIKGHFNYNKIHDLSTEC 596 Query: 581 KEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 ++KL ++P L QAS+I G++P +N+LLI + + Sbjct: 597 RQKLERIQPETLAQASRIPGVSPNDINVLLILMGR 631 >gi|145347894|ref|XP_001418395.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144578624|gb|ABO96688.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 693 Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust. Identities = 264/631 (41%), Positives = 375/631 (59%), Gaps = 32/631 (5%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAA +A+ GAST L+T + CNPA+GG K LV EIDAL Sbjct: 59 YDVIVVGAGHAGCEAALASARAGASTLLLTLNLDRVAWQPCNPAVGGPAKSQLVHEIDAL 118 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG ++D +Q RVLN +GPAV R Q D+ Y M+ + ++ NL + +G Sbjct: 119 GGAMGIISDKTYLQKRVLNASRGPAVWALRAQTDKWEYSREMRTTLEAEPNLSIREG--- 175 Query: 126 GFNTEKNIISSIVMQDNSMIR-----------CSTVVLTTGTFLRGVIHIGKLKIPAGRM 174 +++ +V+ N +R +VVLTTGTF+ G I +G+ + AGR Sbjct: 176 -------MVTELVLGTNDDVRGVRTHFGMEFEAPSVVLTTGTFMGGQIWVGRKTLAAGRA 228 Query: 175 GDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KI 233 G++PS L + F+ RLKTGTPAR+D ++I + E+Q DE + FSF D + Sbjct: 229 GEAPSEGLTEYLQEIGFEIDRLKTGTPARVDSRSIDYTNLEEQPGDEDMRWFSFDEDAHV 288 Query: 234 TNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQI 293 Q+ C +TRT TH++I +N+ + Y G + + GPRYCPSIEDKIVRF ++ HQI Sbjct: 289 VREQMACHMTRTTAATHKLIQDNLLETPTYGGWVGAKGPRYCPSIEDKIVRFADKESHQI 348 Query: 294 FLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFP 353 FLEPEG VY G ST LPE +Q + +RT+PGLE I+RP YA+EYD++ + P Sbjct: 349 FLEPEGRTVPEVYVQGFSTGLPETLQLELLRTLPGLENCKILRPAYAVEYDFLPAYQCKP 408 Query: 354 TLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSAR-----KSNKLDCICFSRTDSYI 408 TLETKKISGLF +GQINGTTGYEEAAAQGL+AGIN+A+ SN + R SY+ Sbjct: 409 TLETKKISGLFFSGQINGTTGYEEAAAQGLLAGINAAQLAKGGASNGAKELILPREGSYL 468 Query: 409 GVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYI 468 G ++DDL +K + EPYRM TSR+EYR+ LR DNAD RLTP+G ++G I + R +F K Sbjct: 469 GTLVDDLCTKDLREPYRMLTSRSEYRLVLRSDNADMRLTPLGREVGLISDARWAKFEKKR 528 Query: 469 QEYNFLRSLLKSLVLTSKN---LSSTSISFKQDGKTRTAYEFLSYPD--FSIQNLFSICP 523 + + L+S L K+ + +S ++ T E L P +S+ F Sbjct: 529 DAVDNEMARLQSTRLNVKDEFCQRALDVSGSGSRQSYTLEELLRRPQVPYSMLEEFGQGN 588 Query: 524 DARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEK 583 + E ++I Y+ + RQ ++ + + + IP D DY+S+ L E +EK Sbjct: 589 VDAPLTRWEAEAVEIRVKYSGFIKRQELQVERESSKFGKPIPDDVDYASISTLRMEAREK 648 Query: 584 LSILKPFNLLQASKIEGMTPAALNLLLIYIK 614 L+ ++P + QAS+I G+TPA ++ LL++++ Sbjct: 649 LARVRPATIGQASRIGGVTPADVSSLLVHLE 679 >gi|258648858|ref|ZP_05736327.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prevotella tannerae ATCC 51259] gi|260850878|gb|EEX70747.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prevotella tannerae ATCC 51259] Length = 625 Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust. Identities = 267/620 (43%), Positives = 374/620 (60%), Gaps = 17/620 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDV+VIG GHAGCEAA AA +GA+T LIT + I MSCNPAIGG+ KG +VREIDA Sbjct: 6 SYDVLVIGAGHAGCEAAYAAATMGANTCLITIDMNKIAQMSCNPAIGGIAKGQIVREIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLMG + D A IQFR+LN KGPA+ PR Q DR Y LAM+ + NL + Q EV Sbjct: 66 LGGLMGEITDLATIQFRILNRSKGPAMWSPRAQCDRMQYSLAMRERLEQTPNLHIWQDEV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + + + + V++T GTFL G++HIG+ + GR + + L + Sbjct: 126 TELLVEHERVVGVRTIWDIVFQAKAVIITAGTFLNGLMHIGRKMVEGGRCAEPAAKFLTD 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S K R+KTGTP R+D +++ D+ E + + FS++ + +Q+ C Sbjct: 186 SIAKNGISYARMKTGTPVRIDARSVHLDEMEIEPGEMDFHRFSYIGTERKLKQMVCWTCY 245 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN E H ++ + + S +Y+G I S GPRYCPSIE K+V F +R H +FLEPEG +T+ Sbjct: 246 TNPEVHAVLEKALPDSPLYNGQIDSIGPRYCPSIETKLVTFPDREQHPLFLEPEGTSTNE 305 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y NG S++LP Q + +R IP V + RPGYAIEYD+ +P +L TLE+K I+GLF Sbjct: 306 LYLNGFSSSLPLHAQLEALRKIPCFRDVALFRPGYAIEYDFFDPTQLKHTLESKVINGLF 365 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQ+NGTTGYEEAA QGLVAGIN+ + R ++YIGV+IDDL +KGV EPY Sbjct: 366 LAGQVNGTTGYEEAAGQGLVAGINAVLLLSGRPAFTLRRDEAYIGVLIDDLVTKGVDEPY 425 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF-AKYIQEYNFLRSLLKSLVL 483 RMFTSRAEYRI LR DNAD RLTP ++ G R RF +K Q L +++ + Sbjct: 426 RMFTSRAEYRILLRQDNADIRLTPYAIQFGLASSERIHRFESKKAQ----LENIITTAQY 481 Query: 484 TSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPD-ARKFSSLVIER-- 535 TS + + ++ G T AY+ ++ P+ ++ L P ++ ++ +R Sbjct: 482 TSIKPDNINTYLEEIGSTLLRRGCKAYDLVTRPEITLSELAKHTPALSKTLDAVSSDREE 541 Query: 536 ----LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 +IE Y+ Y R+ A +I+ E I FDYS+L LS E ++KLS + P Sbjct: 542 TIEAAEIEIKYSGYIARERQLADKIQRLENIKIRGVFDYSTLHQLSTEARQKLSKIDPET 601 Query: 592 LLQASKIEGMTPAALNLLLI 611 L QAS+I G++P+ +++LL+ Sbjct: 602 LAQASRIPGISPSDISVLLL 621 >gi|313899762|ref|ZP_07833265.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium sp. HGF2] gi|312955377|gb|EFR37042.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium sp. HGF2] Length = 624 Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust. Identities = 257/616 (41%), Positives = 375/616 (60%), Gaps = 11/616 (1%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALD 66 DVIVIGGGHAG EAA A+L +T L + I SM CNP++GG KG +VREIDAL Sbjct: 3 DVIVIGGGHAGVEAALACARLKKTTILYSMHIDMIASMPCNPSVGGPAKGIVVREIDALG 62 Query: 67 GLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAG 126 G MG+ ADA +QF++LN KGP V+ R Q+D+ Y+ MQ ++L QE+L++ + V Sbjct: 63 GEMGKAADATALQFKMLNTTKGPGVQCLRVQSDKLEYKRYMQDKLLQQEHLEIREMCVEE 122 Query: 127 FNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSF 186 + IS + +D +++ C +++TTGTF+ + +G +G + + +L S Sbjct: 123 VLAKDGRISGVRQKDGTVVNCRALIMTTGTFMSSTVLVGHTSTLSGPEDEPTTENLSQSL 182 Query: 187 MKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--NRQIECGITR 244 +T RLKTGTPAR+ +I + KT Q + I FS T +I ++Q C +T Sbjct: 183 RNLGIETFRLKTGTPARVRTASIDFSKTAVQPGTDEFICFSEDTKEIRPFDQQAVCYLTY 242 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T +TH II N+K SA+YSG +K GPRYCPSIEDK+VRF ++ HQIFLEPE + D Sbjct: 243 TTAKTHDIINSNLKRSAMYSGLVKGVGPRYCPSIEDKLVRFADKERHQIFLEPESESLDT 302 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 Y G ST++P ++Q + ++PGLE I + YAIEYD I+P + PTLE K I L+ Sbjct: 303 TYVQGFSTSMPYDVQEAMLHSLPGLENCTIEKYAYAIEYDAIDPLQCKPTLENKIIENLY 362 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAAAQGL+AGIN+ RK + + + R ++YIGVMIDDL +KG EPY Sbjct: 363 TAGQINGTSGYEEAAAQGLMAGINAVRKLDHKEPLILHRDEAYIGVMIDDLVTKGTKEPY 422 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RL+ G + G I + R R+ K +Q + S L S+ T Sbjct: 423 RLLTSRAEYRLLLRHDNADARLSEYGYETGLISDERYARYQKKMQNIEEMISYLASVRFT 482 Query: 485 SKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 K+ L + ++G +A E L P +I L R+F + + ++IE Sbjct: 483 PKSTVNGLLERLGLDVLKEGI--SAAELLKRPGITIALLEPYL--EREFDPAIAKLVEIE 538 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + +A+ ++ +K +P+ FDY+ + LS E ++KL+ ++P + QAS+I Sbjct: 539 IRYEGYIKKAKRDAEHLRAMDKVCLPERFDYNQVVNLSLEARQKLNKVQPLTMGQASRIS 598 Query: 600 GMTPAALNLLLIYIKK 615 G+ PA + +L +++++ Sbjct: 599 GVNPADIAVLAVFMEQ 614 >gi|281424807|ref|ZP_06255720.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prevotella oris F0302] gi|281401177|gb|EFB32008.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prevotella oris F0302] Length = 623 Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust. Identities = 260/622 (41%), Positives = 364/622 (58%), Gaps = 15/622 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+VIGGGHAGCEAAA +A +GA T LIT + I MSCNPA+GG+ KG +VREIDAL Sbjct: 5 YDVLVIGGGHAGCEAAAASANMGAKTCLITMDMNKIAQMSCNPAVGGIAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG V D IQFR+LN+ KGPAV PR Q DR + + + ENLD+ Q + Sbjct: 65 GGNMGIVTDRTAIQFRMLNIGKGPAVWSPRAQCDRGKFIWEWRTTLDHTENLDIWQDQAD 124 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + N + ++V+T GTFL G++H+G+ I GR + + S Sbjct: 125 ELIVKNNEAVGVKTIWGVTFYAKSIVVTAGTFLNGLMHVGRKMIEGGRCAEPAVHHFTGS 184 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 ++ + R+KTGTP R+D +T+ +D+ E+Q D FS+M + RQ+ C T T Sbjct: 185 ITRWGITSARMKTGTPIRIDKRTVHFDEMEEQKGDTDFHQFSYMGEHRILRQLSCWTTYT 244 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N E H + + + S +++G I+S GPRYCPSIE K+V F ++ H +FLEPEG +T+ + Sbjct: 245 NKEVHETLRKGLTDSPLFNGQIQSTGPRYCPSIETKLVTFPDKEQHPLFLEPEGEDTNEM 304 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG S+++P +IQ I IP V I RPGYAIEYDY +P +L +LE+K + GLF Sbjct: 305 YLNGFSSSMPMDIQLAAIHKIPAFRDVKIYRPGYAIEYDYFDPTQLKHSLESKILPGLFF 364 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ+NGTTGYEEA QG+VAGIN+A + R SYIGV+IDDLT+KGV EPYR Sbjct: 365 AGQVNGTTGYEEAGGQGIVAGINAALHCTGSEPFIMQRDQSYIGVLIDDLTTKGVDEPYR 424 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAEYRI LR D+AD RLT I LG R + + + + L K + + Sbjct: 425 MFTSRAEYRILLRQDDADARLTEIAYNLGIAKRNRYDWWHQKKEAVHRLIHFCKEYPIKA 484 Query: 486 KNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSL-------VI 533 ++S S G T + ++ P ++QNL I P+ ++ + + Sbjct: 485 SEINSQLESL---GTTPLRAGCKLSDLIARPHLTLQNLSEIIPELKEALQIPENRKEEIA 541 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E +I+ Y Y R+ I A ++ E I F+YS L +S E ++KL + P L Sbjct: 542 EATEIQMKYQGYIERERIIADKMHRLENIKIKGRFNYSELQEISTEGRKKLEKIDPETLA 601 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I G++P+ +N+LLI + + Sbjct: 602 QASRIPGVSPSDINVLLILLGR 623 >gi|260662532|ref|ZP_05863427.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus fermentum 28-3-CHN] gi|260553223|gb|EEX26166.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus fermentum 28-3-CHN] Length = 644 Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust. Identities = 261/624 (41%), Positives = 366/624 (58%), Gaps = 10/624 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDVIV+G GHAG EAA AA++G T LIT + M CNP++GG KG +VREIDA Sbjct: 22 DYDVIVVGAGHAGSEAALAAARMGNKTLLITISLEMVAFMPCNPSLGGPAKGVVVREIDA 81 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG D IQ R+LN KGPAVR R QAD+ Y M+ I ++NL + QG V Sbjct: 82 LGGEMGHNIDKTYIQMRMLNTGKGPAVRALRAQADKHAYHRQMKWTIEKEKNLTLRQGVV 141 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ + VVLT GT RG I IG+L+ +G + L Sbjct: 142 DDLIVEDGTVKGVITNTGAAYHAKAVVLTVGTAARGKIIIGELQYQSGPNNSKAAVKLSE 201 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT----NRQIEC 240 + + FD R KTGTP R+DG TI + KTE+Q D+ FSF T + QI Sbjct: 202 ALERLGFDLQRFKTGTPPRVDGNTIDYSKTEEQPGDQTPNHFSFDTPDTSYIPVKDQISS 261 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +T TN TH I+ N+ + ++SG I+ GPRYCPSIEDKIVRF +++ HQ+FLEPEG Sbjct: 262 WLTYTNPTTHEILRNNLDRAPMFSGVIEGVGPRYCPSIEDKIVRFADKDRHQVFLEPEGR 321 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 +TD Y +G+ST++PEEIQHQ I ++ GLE ++RPGYAIEYD + P +L TLETK + Sbjct: 322 DTDEFYLDGLSTSMPEEIQHQMIHSVAGLEHAELMRPGYAIEYDVVAPYQLKATLETKLV 381 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 + L+ AGQ NGT+GYEEAA QGL+AGIN+ ++ + R+D+YIGVMIDDL +KG Sbjct: 382 NNLYTAGQTNGTSGYEEAAGQGLIAGINAGLRAQGKEPFVLKRSDAYIGVMIDDLVTKGT 441 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYR+ TSRAEYR+ LR DNAD RL G +G + + R + Q + LK Sbjct: 442 KEPYRLLTSRAEYRLILRHDNADLRLMEKGHAIGLVSDERLAAMEEKKQRVEDEIARLKD 501 Query: 481 L-VLTSKNLSSTSISFK----QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIER 535 + + + + ++ +D A+ Y D+ F P A + +E+ Sbjct: 502 FRIKPGEEIDAFVVAHGDKPLKDAIAADAFLRRPYVDYPTLLKFVDAP-AVELDRQEVEQ 560 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ YA Y ++ + + +K E + IP D DY ++ L+ E ++KL ++P L QA Sbjct: 561 VEIQLKYAGYIEKEEAKIERLKRMEAKRIPADIDYQAIEGLATEGRQKLEQIRPTTLAQA 620 Query: 596 SKIEGMTPAALNLLLIYIKKNTVK 619 S+I G+ PA L +L +Y+++ +K Sbjct: 621 SRISGVNPADLAILSVYLRQGKLK 644 >gi|269837669|ref|YP_003319897.1| glucose-inhibited division protein A [Sphaerobacter thermophilus DSM 20745] gi|269786932|gb|ACZ39075.1| glucose-inhibited division protein A [Sphaerobacter thermophilus DSM 20745] Length = 663 Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust. Identities = 259/652 (39%), Positives = 377/652 (57%), Gaps = 40/652 (6%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIG GHAGCEAA +A+ G +T ++T IG M CNP+IGG KGHLVRE+DAL Sbjct: 8 FDVIVIGAGHAGCEAALASARAGCTTLVLTPNLDRIGFMPCNPSIGGPAKGHLVREVDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MGR D IQ R+LN KGPAV+ PR QAD+ LY +AM+ + Q L + Q V Sbjct: 68 GGEMGRAIDRTAIQIRMLNTSKGPAVQAPRAQADKMLYPMAMKEALERQPRLTLRQEAVT 127 Query: 126 GFNT----EKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 ++ + ++ + VV+T GTFLRG + G+ + GR GD + + Sbjct: 128 DIELVTAGGRHRVQAVRTDAGNRYLAGAVVVTAGTFLRGRMIAGEWRAAGGRAGDPAATA 187 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR----- 236 L S RLKTGTP R+D ++I + K E Q +R + FSF D R Sbjct: 188 LSASLSDLGIRLRRLKTGTPPRIDARSIDFSKAEVQTGSDRPLWFSF--DGAQGRIERLE 245 Query: 237 ----------------QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIED 280 Q+ C + TN TH II NI + +++G I++ G RYCPSIED Sbjct: 246 LPPLPIYPGITDGWRVQMPCYLIHTNPATHDIIAANIDRAPMFNGTIQAVGTRYCPSIED 305 Query: 281 KIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYA 340 KIVRF ++ H +FLEPEG T VY G +T+LP+++Q F+RTIP L + I R GYA Sbjct: 306 KIVRFRDKPSHGLFLEPEGWRTTEVYVQGANTSLPQDVQLAFLRTIPALAEATITRYGYA 365 Query: 341 IEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCIC 400 +EYD I+ EL TL +++ GLF AGQ+ GT+GYEEAA QG+VAG+N+A + + + Sbjct: 366 VEYDAIDSSELTRTLAARRVDGLFFAGQVCGTSGYEEAAGQGIVAGLNAACFTQGAEPLV 425 Query: 401 FSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR 460 R SYIGVMIDDLT++ +EPYRM TSRAE+R+ LR DNA+ RL+ I + G I Sbjct: 426 LRRDQSYIGVMIDDLTTQEFVEPYRMLTSRAEHRLLLRCDNAEARLSDIAYRFGLIS--- 482 Query: 461 QKRFAKYIQEYNFLRSLLKSLVLTSKNLSS-TSISFKQDG-----KTRTAYEFLSYPDFS 514 ++R+ E + L L +++ T+ + ++ G + +TA ++L P+ Sbjct: 483 RERWEAVQAESRIITETLARLAAHHLSMNPRTAEALERAGLPPLARNQTALDYLRRPEVR 542 Query: 515 IQNLFSIC----PDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDY 570 + L S+ D+ S + ER+++E+ Y AY +++ + I+ E+R IP DY Sbjct: 543 YEALASVLEALGADSLSVPSRLAERIEVEARYEAYIEKELARVERIRHLEERPIPDGIDY 602 Query: 571 SSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVKLNE 622 ++L L NE +EKL+ +P L QAS+I G+TP + +L++++++ + E Sbjct: 603 TALAGLRNEAREKLARFRPATLGQASRIAGVTPGDVAVLMVHLERGAASIEE 654 >gi|184156314|ref|YP_001844654.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus fermentum IFO 3956] gi|227514111|ref|ZP_03944160.1| glucose-inhibited division protein A [Lactobacillus fermentum ATCC 14931] gi|183227658|dbj|BAG28174.1| glucose inhibited division protein [Lactobacillus fermentum IFO 3956] gi|227087482|gb|EEI22794.1| glucose-inhibited division protein A [Lactobacillus fermentum ATCC 14931] gi|299783730|gb|ADJ41728.1| Glucose inhibited division protein A [Lactobacillus fermentum CECT 5716] Length = 634 Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust. Identities = 263/624 (42%), Positives = 363/624 (58%), Gaps = 10/624 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDVIV+G GHAG EAA AA++G T LIT + M CNP++GG KG +VREIDA Sbjct: 12 DYDVIVVGAGHAGSEAALAAARMGNKTLLITISLEMVAFMPCNPSLGGPAKGVVVREIDA 71 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG D IQ R+LN KGPAVR R QAD+ Y M+ I ++NL + QG V Sbjct: 72 LGGEMGHNIDKTYIQMRMLNTGKGPAVRALRAQADKHAYHRQMKWTIEKEKNLTLRQGVV 131 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ + VVLT GT RG I IG+L+ +G + L Sbjct: 132 DDLIVEDGTVKGVITNTGAAYHAKAVVLTVGTAARGKIIIGELQYQSGPNNSKAAVKLSE 191 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT----NRQIEC 240 + + FD R KTGTP R+DG TI + KTE+Q D+ FSF T + QI Sbjct: 192 ALERLGFDLQRFKTGTPPRVDGNTIDYSKTEEQPGDQTPNHFSFDTPDTSYIPVKDQISS 251 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +T TN TH I+ N+ + ++SG I+ GPRYCPSIEDKIVRF +++ HQ+FLEPEG Sbjct: 252 WLTYTNPTTHEILRNNLDRAPMFSGVIEGVGPRYCPSIEDKIVRFADKDRHQVFLEPEGR 311 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 +TD Y +G+ST++PEEIQHQ I ++ GLE ++RPGYAIEYD + P +L TLETK + Sbjct: 312 DTDEFYLDGLSTSMPEEIQHQMIHSVAGLEHAELMRPGYAIEYDVVAPYQLKATLETKLV 371 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 + L+ AGQ NGT+GYEEAA QGL+AGIN+ ++ + R+D+YIGVMIDDL +KG Sbjct: 372 NNLYTAGQTNGTSGYEEAAGQGLIAGINAGLRAQGKEPFVLKRSDAYIGVMIDDLVTKGT 431 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYR+ TSRAEYR+ LR DNAD RL G +G + + R + Q + LK Sbjct: 432 KEPYRLLTSRAEYRLILRHDNADLRLMEKGHAIGLVSDERLAAMEEKKQRVEDEIARLKD 491 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAY---EFLSYP--DFSIQNLFSICPDARKFSSLVIER 535 + + D + A FL P D+ F P A + +E+ Sbjct: 492 FRIKPGEEIDAFVVAHGDKPLKDAIAADAFLRRPYVDYPTLLKFVDAP-AVELDRQEVEQ 550 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ YA Y ++ + + +K E + IP D DY ++ L+ E ++KL ++P L QA Sbjct: 551 VEIQLKYAGYIEKEEAKIERLKRMEAKRIPADIDYQAIEGLATEGRQKLEQIRPTTLAQA 610 Query: 596 SKIEGMTPAALNLLLIYIKKNTVK 619 S+I G+ PA L +L +Y+++ +K Sbjct: 611 SRISGVNPADLAILSVYLRQGKLK 634 >gi|297588068|ref|ZP_06946712.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Finegoldia magna ATCC 53516] gi|297574757|gb|EFH93477.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Finegoldia magna ATCC 53516] Length = 627 Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust. Identities = 255/616 (41%), Positives = 371/616 (60%), Gaps = 9/616 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+V+G GHAGCEAA A+LG TA+++ ++ + CNP IGG GKGHLV+E+DAL Sbjct: 10 YDVVVVGAGHAGCEAALATARLGLKTAIMSISLDSVADLPCNPNIGGTGKGHLVKEVDAL 69 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG V D IQ R+LN KGPAV R QAD+ Y M+ + + ENLD+I+ EV Sbjct: 70 GGEMGLVIDKTYIQSRMLNTSKGPAVHSLRVQADKRKYHDEMKSVLENTENLDLIEAEVV 129 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E N I S+ ++ V+L TGT+L+G++ +G+ +G G S L +S Sbjct: 130 DIGVEDNKIKSVTTAQGAIFPTRAVILATGTYLKGLVMMGEYTYESGPHGMKSSKKLSDS 189 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KITNRQIECGIT 243 + R KTGTPAR+ ++ ++ Q D+ +IPFSF+ D I+ +Q C +T Sbjct: 190 LKNLGIELRRFKTGTPARVHKDSLNYEVMTVQPGDDDVIPFSFLNDGKDISKKQENCYLT 249 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 T +T +II +N++ S +Y+G +K GPRYCPSIEDKIVRF +R+ HQ+F+EPEGL+T Sbjct: 250 YTTHKTKQIIEDNLERSPMYAGIVKGVGPRYCPSIEDKIVRFPDRDEHQVFVEPEGLSTK 309 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G+S+ LPEE+Q + +TI G E V +R Y IEYD I+P L TLE +I+ L Sbjct: 310 EMYIQGVSSTLPEEVQKEMYKTIIGFENVRFMRSAYGIEYDCIDPTILKRTLEHLEINNL 369 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQING++GYEEAA QG++AGIN+A + R+D+YIGV+IDDL +KG EP Sbjct: 370 FFAGQINGSSGYEEAAGQGIIAGINAAMNLLGKEPFVLDRSDAYIGVLIDDLVTKGTNEP 429 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRM TSR EYR++LR DNAD RLT ++G + R ++ + + LKS+++ Sbjct: 430 YRMMTSRCEYRLTLRQDNADLRLTERAHEIGLATDERYEKMLHKKKTIDEEIERLKSIMV 489 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSY---PDFSIQNLFSICPDARKFSSLVIERLQIES 540 T ++ + + +T L P+ + + + + RLQ+E+ Sbjct: 490 TPTEETNEKLRKLGSSELKTGINLLDLIKRPELTYDKTEEFDVNRPELPRYL--RLQVET 547 Query: 541 --SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 Y Y +QM + K+ K E R + DY + LSNE +KL+ +KP +L QAS+I Sbjct: 548 HIKYEGYIAKQMSQIKQFKKLENRKLYMIEDYKEVMGLSNEAVQKLNDIKPESLGQASRI 607 Query: 599 EGMTPAALNLLLIYIK 614 G++P+ +N+LLIY++ Sbjct: 608 SGVSPSDINVLLIYME 623 >gi|166368239|ref|YP_001660512.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Microcystis aeruginosa NIES-843] gi|189039347|sp|B0JGQ4|MNMG_MICAN RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|166090612|dbj|BAG05320.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Microcystis aeruginosa NIES-843] Length = 635 Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust. Identities = 269/627 (42%), Positives = 369/627 (58%), Gaps = 31/627 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+G GH+GCEAA A+LG T L+T I CNPA+GG K L E+DAL Sbjct: 13 FDVIVVGAGHSGCEAALACARLGCRTLLLTLNLDKIAWQPCNPAVGGPAKSQLTHEVDAL 72 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G +G++AD +Q RVLN +GPAV R Q D+ Y M+ + +Q NL VI+ +A Sbjct: 73 GGEIGKMADRTYLQKRVLNASRGPAVWALRAQTDKREYAAVMKGIVETQANL-VIREAMA 131 Query: 126 -----GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 G N + + + + V+LTTGTFL G I IG + AGR G+ + Sbjct: 132 TDLILGANEQ---VLGVETYFGTCFAAKAVILTTGTFLGGKIWIGGKSMAAGRAGEFAAV 188 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIE 239 L + + F+TGRLKTGTPAR+D +++ + + E Q D+ + FSF + R Q+ Sbjct: 189 GLTETLNRLGFETGRLKTGTPARVDKRSVDYSRMEPQPPDDEVRWFSFDPEVWIEREQMN 248 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +TRT TH++I +N+ S IY G I S GPRYCPSIEDKIVRF ++ HQIF+EPEG Sbjct: 249 CHLTRTTAATHQLIRDNLHLSPIYGGFIDSKGPRYCPSIEDKIVRFADKESHQIFIEPEG 308 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 + +Y G ST LPE +Q +RT+PGLE ++R YA+EYDY+ + +PTL TKK Sbjct: 309 RDIPELYIQGFSTGLPENVQLAMLRTLPGLENCVMLRAAYAVEYDYLPATQCYPTLMTKK 368 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGLVAGIN+AR + + I F R +SY+G ++DDL +K Sbjct: 369 IEGLFCAGQINGTTGYEEAAAQGLVAGINAARFALGKELIVFPREESYLGTLVDDLCTKD 428 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF----AKYIQEYNFLR 475 + EPYRM TSR+EYR+ LR DNAD RLTP+G ++G I RR + F A I E L Sbjct: 429 LREPYRMLTSRSEYRLVLRSDNADQRLTPLGREIGLIDNRRWQLFQSKQANIIAEKERLH 488 Query: 476 --------SLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARK 527 + ++V ++ S+S D R + +L + + N PD Sbjct: 489 ETRIKERDQVAIAIVKDTEQKIKGSLSLA-DLLRRPSLHYLDLDRYGLGN-----PDINL 542 Query: 528 FSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSIL 587 E ++IE Y+ Y RQ + +I R + D DY + LS E +EKL+ + Sbjct: 543 AER---EGVEIEIKYSGYLKRQQNQIDQISRHSNRHLSPDIDYMKIETLSMESREKLTKI 599 Query: 588 KPFNLLQASKIEGMTPAALNLLLIYIK 614 KP + QAS+I G+ PA +N LL+Y++ Sbjct: 600 KPATIGQASRIGGVNPADINALLVYLE 626 >gi|319936585|ref|ZP_08010999.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Coprobacillus sp. 29_1] gi|319808383|gb|EFW04943.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Coprobacillus sp. 29_1] Length = 617 Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust. Identities = 259/624 (41%), Positives = 376/624 (60%), Gaps = 22/624 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAG EA A++G T LIT +GS+ CN +IGG KG +VREIDAL Sbjct: 2 YDVIVVGGGHAGIEACLAPARIGMKTLLITSHFENVGSLPCNTSIGGPAKGIIVREIDAL 61 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ +DA +Q ++LN KGP V+ R QAD++ Y MQ+ + QE+LD+I+G V Sbjct: 62 GGQMGKTSDATYLQLKMLNTAKGPGVQSLRAQADKKAYPRYMQKVLKKQEHLDIIEGMVE 121 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E+ + +++ + TV+LTTGT+L+ I +G K P+G + S L + Sbjct: 122 NLIVEEQTVKGVILDNGKEYFGKTVILTTGTYLKAEILVGDQKTPSGPDQERQSLFLSDR 181 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--NRQIECGIT 243 + F RLKTGTP R+D +++ + +T+ Q + FS+ T Q C +T Sbjct: 182 LTELGFRIQRLKTGTPPRVDIESVDFSQTQLQPGTNEPLAFSYETTSYIPIEEQTPCYLT 241 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH+II +N+ ++YSG +K GPRYCPSIEDKIV+F ++ HQIFLEPE + Sbjct: 242 YTNEDTHKIIKDNLHKCSMYSGIVKGIGPRYCPSIEDKIVKFSDKPQHQIFLEPESKEMN 301 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G ST++P +IQ Q IRTIPGL+ I++ YAIEYD I+P +L+P+LETK I L Sbjct: 302 TIYVQGFSTSMPHDIQEQMIRTIPGLQNCKILKYAYAIEYDAIDPLQLWPSLETKVIKNL 361 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGT+GYEEAAAQGL+AG+N+A+K + + R ++YIGVMIDDL +KG EP Sbjct: 362 FTAGQINGTSGYEEAAAQGLIAGLNAAKKLRGENPLILKRDEAYIGVMIDDLVTKGTKEP 421 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRM TSRAEYR+ LR DNAD RL G + + + ++ + L+++ Sbjct: 422 YRMLTSRAEYRLLLRHDNADERLRKYGYDAHLVKPEVYQIYLDKMERIHNEIERLETIRF 481 Query: 484 TSKN--------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIE- 534 T K+ L ST +S + +A L P+ + + +SL +E Sbjct: 482 TPKHEINNILETLGSTRLS-----EGISAKSLLQRPEMDYSKIKPYIGE----TSLTLEE 532 Query: 535 --RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 R+ I Y Y + + + + K E++ IP D +Y ++ LS E K+KLS ++P + Sbjct: 533 EKRVTILIKYKGYIDKALRQVDKQKKMEEKQIPVDINYDAVLNLSLEAKQKLSQIRPLTI 592 Query: 593 LQASKIEGMTPAALNLLLIYIKKN 616 QAS+I G+ PA +++LLIY+K++ Sbjct: 593 AQASRISGINPADISVLLIYLKQH 616 >gi|312869221|ref|ZP_07729393.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus oris PB013-T2-3] gi|311095242|gb|EFQ53514.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus oris PB013-T2-3] Length = 647 Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust. Identities = 261/620 (42%), Positives = 363/620 (58%), Gaps = 11/620 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAG EAA AA++G T L+T + M CNP++GG KG +VREIDAL Sbjct: 20 YDVIVVGAGHAGSEAALAAARMGNKTLLVTINLDMVAFMPCNPSVGGPAKGIVVREIDAL 79 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG D +Q R+LN KGPAVR R QAD+ Y M+ I ++ NL + QG V Sbjct: 80 GGEMGHNIDKTYVQMRMLNTGKGPAVRALRAQADKHAYHRQMKLTIENEPNLTLRQGTVD 139 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + +V + VVLT GT RG I IG+L+ +G + L + Sbjct: 140 QLIVEDGVCKGVVTNTGARYHAKAVVLTVGTAARGKIIIGELQYQSGPNNSKSAVKLSEN 199 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT----NRQIECG 241 + FD R KTGTP R++GK+I +D+TE+Q D FSF T + Q+ C Sbjct: 200 LEELGFDLERFKTGTPPRVNGKSIQFDETEEQPGDAAPHHFSFDTPDSSYIAVTDQLACW 259 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN TH II N+ + ++SG IK GPRYCPSIEDKIVRF +++ HQ+FLEPEG + Sbjct: 260 LTYTNEGTHGIIRANLDRAPMFSGVIKGVGPRYCPSIEDKIVRFADKSRHQVFLEPEGRD 319 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 TD Y +GIST++PEE+Q + + +I GLEK ++RPGYAIEYD + P +L PTLETK + Sbjct: 320 TDEYYLDGISTSMPEEVQQKIVHSIKGLEKAELMRPGYAIEYDVVAPYQLRPTLETKLVQ 379 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 L+ AGQ NGT+GYEEAA QGL+AGIN+ ++ R+D+YIGVMIDDL +KG Sbjct: 380 NLYTAGQTNGTSGYEEAAGQGLIAGINAGLRAQGKGPFVLGRSDAYIGVMIDDLVTKGTK 439 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAEYR+ LR DNAD RL G +G + + R + L+++ Sbjct: 440 EPYRLLTSRAEYRLILRHDNADFRLMEKGHAVGLVSDERLAKMEAKKAAVAAEIKRLETI 499 Query: 482 VLTSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICP-DARKFSSLVIER 535 + + ++ G R +A + + P Q L P A + VIE+ Sbjct: 500 KFKPSDEAVNDF-IEEHGDNRLKDAISAADLIKRPYVDYQTLTRFIPAPAEELDRHVIEQ 558 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ YA Y ++ + +K E + IP DY+ + L+ E ++KL ++P L QA Sbjct: 559 VEIQLKYAGYIKKEEQKVDRMKRMEAKRIPDSIDYNDIDGLATEGRQKLEKIRPATLAQA 618 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G+ PA L +L +YI++ Sbjct: 619 SRISGVNPADLAILSVYIRQ 638 >gi|91215357|ref|ZP_01252328.1| glucose-inhibited division protein A [Psychroflexus torquis ATCC 700755] gi|91186309|gb|EAS72681.1| glucose-inhibited division protein A [Psychroflexus torquis ATCC 700755] Length = 623 Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust. Identities = 266/631 (42%), Positives = 387/631 (61%), Gaps = 28/631 (4%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M +YDVIV+G GHAG EAAA AA +G+ST L+T I MSCNPA+GG+ KG ++R Sbjct: 1 MFKDTYDVIVVGAGHAGSEAAAAAANMGSSTLLVTMNLQNIAQMSCNPAMGGIAKGQILR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDA+ G G V+D + IQF++LN KGPA+ PR Q+DR ++ + ++ +NLD Sbjct: 61 EIDAIGGYSGIVSDTSAIQFKMLNKSKGPAMWSPRVQSDRMMFSQHWREKLEQTQNLDFY 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V+G EK+ + + I+ TV+LT GTFL G+IHIG GR G+ S Sbjct: 121 QEMVSGLMVEKHKVVGVRTSLGLEIKAKTVILTNGTFLNGLIHIGNKNFGGGRAGERAST 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIE 239 + ++ F+ GR+KTGTP R+DG+++ + K E+Q DE FS+ ++ K +Q Sbjct: 181 GMTAELIELGFEAGRMKTGTPPRVDGRSLDFSKMEEQPGDENPWKFSYSSETKPLEKQRS 240 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +T T+ E H I+ E S +++G I+S GPRYCPSIEDKI +F ++ HQ+F+EPEG Sbjct: 241 CWMTYTSPEVHNILKEGFDRSPMFNGAIQSTGPRYCPSIEDKIHKFADKERHQMFVEPEG 300 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 NT Y NG ST+LPE+IQ++ ++ + G E V RPGYAIEYDY P +L TLETK Sbjct: 301 WNTIEYYVNGFSTSLPEDIQYKALKLVAGFENVKFFRPGYAIEYDYFPPTQLRHTLETKL 360 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 + GL+ AGQINGTTGYEEAA+QGL+AG+N+A K + + SR+++YIGV+IDDL +KG Sbjct: 361 VEGLYFAGQINGTTGYEEAASQGLMAGMNAALKVQEKEDFILSRSEAYIGVLIDDLITKG 420 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR LR DNAD RLT +G R K + ++ K Sbjct: 421 TEEPYRMFTSRAEYRTLLRQDNADFRLTGKSFGVGLASSERMKVMEEKKKKSETFVEFFK 480 Query: 480 SLVLTSKNL-----SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL--- 531 + +T+ + S S Q GK Y+ L+ P+ + D RK S+ Sbjct: 481 NQSVTTDEINPILGSKKSSKVDQQGKL---YKILARPNI-------VMEDMRKLESVKKH 530 Query: 532 ---------VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKE 582 V+E+++++ YA Y ++ + A ++ E IP+ F+Y+ L ++S E +E Sbjct: 531 IEENNLGNEVLEQVEVQVKYAGYIEKEKLNADKLNRLENVRIPEHFNYNGLKSMSLEARE 590 Query: 583 KLSILKPFNLLQASKIEGMTPAALNLLLIYI 613 KL+ +KP + QAS++ G+ P+ +++LL+++ Sbjct: 591 KLTKIKPRTISQASRVSGVNPSDVSVLLVHM 621 >gi|289523930|ref|ZP_06440784.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289502586|gb|EFD23750.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 628 Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust. Identities = 258/617 (41%), Positives = 359/617 (58%), Gaps = 9/617 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R++DVIV+G GHAGCEAA V+A++GA T L+ I M CNP+IGG KGH+ REID Sbjct: 7 RNFDVIVVGAGHAGCEAALVSARMGARTLLLNLYLDNIALMPCNPSIGGPAKGHITREID 66 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G + ADA+ I R LN KGPAVR R Q D Y M+ + + NL V Q Sbjct: 67 ALGGEQAKAADASTIHIRWLNTSKGPAVRALRVQCDLSDYHKYMRNTLETTINLYVHQAL 126 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V EK + + V++TTG + G + IG P+G +G S L Sbjct: 127 VTDLWVEKGRVRGVKTWLGEEYYSPCVIITTGPYTNGRVFIGSHSFPSGPLGQMASLELS 186 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 NS + F TGRL+T T RL TI + KQ + + + FS C +T Sbjct: 187 NSLKRIGFITGRLRTDTTPRLHADTINFTSLTKQDSADEPLCFSHWGIPRIYSGYSCYLT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 R+ +TH II ++ S + G+I S GPRYCPSIEDK++RF E+ H IFLEP ++ Sbjct: 247 RSTAKTHEIIKSSLTRSPMAKGEINSPGPRYCPSIEDKVMRFPEKESHPIFLEPTCRHSK 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y ST+LP ++Q + +R++PG E+ +I+RPGYAIEYDY P +L+P LETK + GL Sbjct: 307 EIYMQNFSTSLPYDVQVEMVRSVPGCERAHILRPGYAIEYDYFPPTQLYPWLETKLVEGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGT+GYEEAAAQGL+AGIN+ K K D I R ++YIGV+IDDL +KG EP Sbjct: 367 FFAGQINGTSGYEEAAAQGLMAGINAVLKLRKEDPIVLGRDEAYIGVLIDDLVTKGTEEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQ----KRFAKYIQEYNFLRSLLK 479 YRM TSR EYR+ +R DNAD RL PIG +LG I + + K++ +E + L+ Sbjct: 427 YRMLTSRCEYRLLMRHDNADKRLAPIGRRLGLIDDEKWSLLLKKWKSMDEEIDRLKG--- 483 Query: 480 SLVLTSKNLSSTSISFKQDG--KTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 + + S +++ S Q +T +AY+ L P L+ I P + + R++ Sbjct: 484 TKIYPSYGVNTLLSSLNQPKLEETVSAYDLLKRPGIDYDILYKIAPLEESLNEEIKSRIE 543 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 IE Y+ Y RQ A +++ E+ IP D +Y + LS+E +EKL + P L QA + Sbjct: 544 IEVKYSGYIERQTSLASKLQRIEQLRIPLDLNYDEIKGLSSEGREKLKKILPGTLGQAGR 603 Query: 598 IEGMTPAALNLLLIYIK 614 I G+TP+ L +L +Y++ Sbjct: 604 ISGVTPSDLQILWMYLE 620 >gi|22538276|ref|NP_689127.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Streptococcus agalactiae 2603V/R] gi|22535190|gb|AAN01000.1|AE014288_18 glucose-inhibited division protein A [Streptococcus agalactiae 2603V/R] Length = 613 Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust. Identities = 264/606 (43%), Positives = 369/606 (60%), Gaps = 14/606 (2%) Query: 19 EAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGI 78 EA+ A+++G T L T + M CNP+IGG KG +VREIDAL G MG+ D I Sbjct: 2 EASLAASRMGCKTLLATINLEMLAFMPCNPSIGGSAKGIVVREIDALGGEMGKNIDKTYI 61 Query: 79 QFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIV 138 Q ++LN KGPAVR R QAD+ LY M++ + QENL + Q + E + + Sbjct: 62 QMKMLNTGKGPAVRALRAQADKALYAQTMKQTVEKQENLTLRQAMIDEILVEDGKVVGVR 121 Query: 139 MQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKT 198 N +VV+TTGT LRG I +G LK +G S +L ++ + GR KT Sbjct: 122 TATNQKFSAKSVVITTGTALRGEIILGDLKYSSGPNNSLASVTLADNLRDLGLEIGRFKT 181 Query: 199 GTPARLDGKTIIWDKTEKQFADERLIPFSFMT---DKITNRQIECGITRTNLETHRIIME 255 GTP R+ +I ++KTE Q DE+ FSFM+ D IT+ Q+ C +T TN +H II + Sbjct: 182 GTPPRVKASSINYEKTEIQPGDEQPNHFSFMSRDEDYITD-QVPCWLTYTNTLSHDIINQ 240 Query: 256 NIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALP 315 N+ + ++SG +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG T+ VY G+ST+LP Sbjct: 241 NLHRAPMFSGIVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRYTEEVYVQGLSTSLP 300 Query: 316 EEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGY 375 E++Q +R+I GLE ++R GYAIEYD + P +L TLETK I+GLF AGQ NGT+GY Sbjct: 301 EDVQVDLLRSIKGLENAEMMRTGYAIEYDIVLPHQLRATLETKVIAGLFTAGQTNGTSGY 360 Query: 376 EEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRI 435 EEAA QGLVAGIN+A K + R+D+YIGVMIDDL +KG LEPYR+ TSRAEYR+ Sbjct: 361 EEAAGQGLVAGINAALKVQGKPELILKRSDAYIGVMIDDLVTKGTLEPYRLLTSRAEYRL 420 Query: 436 SLRPDNADNRLTPIGMKLGCIGERR----QKRFAKYIQEYNFLRSL-LKSLVLTSKNLSS 490 LR DNAD RLT IG ++G + E R +KR ++ E L S+ LK + T+K + Sbjct: 421 ILRHDNADMRLTEIGYEIGLVDEERYAIFKKRQMQFENELERLDSIKLKPVSETNKRIQ- 479 Query: 491 TSISFKQDGKTRTAYEFLSYPD--FSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGR 548 + FK TA EF+ P +++ F C D S VIE L+ E Y Y + Sbjct: 480 -ELGFKPLTDALTAKEFMRRPQITYAVATDFVGCAD-EPLDSKVIELLETEIKYEGYIKK 537 Query: 549 QMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNL 608 + + ++K E++ IP D+ + +++ E ++K + P L QAS+I G+ PA +++ Sbjct: 538 ALDQVAKMKRMEEKRIPPHIDWDDIDSIATEARQKFKKINPETLGQASRISGVNPADISI 597 Query: 609 LLIYIK 614 L++Y++ Sbjct: 598 LMVYLE 603 >gi|51894469|ref|YP_077160.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Symbiobacterium thermophilum IAM 14863] gi|81170583|sp|Q67J34|MNMG_SYMTH RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|51858158|dbj|BAD42316.1| Glucose inhibited division protein A [Symbiobacterium thermophilum IAM 14863] Length = 630 Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust. Identities = 253/619 (40%), Positives = 365/619 (58%), Gaps = 7/619 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + + YDVIV+G GHAG EAA AA+ G TA T IG+M+CNP+IGG KGHLVRE Sbjct: 3 LTKEYDVIVVGAGHAGIEAALAAARKGMRTACFTTTLENIGAMNCNPSIGGPAKGHLVRE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M ADA +Q R+LN KGPAV+ R Q D+ Y AM+ + NLD+ Q Sbjct: 63 IDALGGQMALTADATFLQMRLLNSGKGPAVQALRAQIDKRAYAWAMRLVLERTPNLDLKQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E + IV VVL+TGT+L G IG+++ +G G +P+ Sbjct: 123 AMVQEIVVEDGRVRGIVTATGIFYGAKAVVLSTGTYLHGRTIIGEVQRSSGPGGLAPAVG 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L S + F+ GR KTGTP R+DG+T+ + + +Q D FSFM+ Q+ C Sbjct: 183 LTESLKRLGFEVGRFKTGTPPRVDGRTVDFSRMVRQDGDPEPHRFSFMSPLDHREQLPCW 242 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T T +H +I N+ + +++G I+ GPRYCPS+EDK+VRF ++ HQ+FLEPE Sbjct: 243 LTHTTPASHELIRRNLHRAPMFTGVIEGRGPRYCPSVEDKVVRFADKESHQVFLEPESRE 302 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 + +Y G+ST+LPEE+Q + +RT+PG+E+ ++RPGYAIEYDYI +L P+LETK + Sbjct: 303 SHEMYVLGLSTSLPEEVQIELVRTVPGMEEAELMRPGYAIEYDYIVSTQLKPSLETKLVR 362 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF GQINGT+GYEEAAAQGL+AGIN+A + + SR++ YIGV+IDDL +KG Sbjct: 363 GLFCGGQINGTSGYEEAAAQGLIAGINAACYVEGREPLVISRSEGYIGVLIDDLVTKGSP 422 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKY-----IQEYNFLRS 476 EPYRM TSRAE+R+ LR DNA RLT G + G + + R + F + R+ Sbjct: 423 EPYRMLTSRAEFRMMLRQDNAHLRLTEKGREYGLVDDARWEVFVALRDGIEAERERLART 482 Query: 477 LLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 ++ + L + + G T + L P+ ++L + + + Sbjct: 483 VVGPAPEVQRVLERLGSAPLKAGV--TLEQLLRRPEVRYEHLVEMGLGRPDLDEAIWREV 540 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 + + YA Y ++ + ++ E R IP DY +L LS E +EKLS ++P L QAS Sbjct: 541 ETQVKYAGYIAKEQQQVDRMRRMEARRIPPTLDYQALTGLSMEAREKLSRIRPETLGQAS 600 Query: 597 KIEGMTPAALNLLLIYIKK 615 +I G++PA + +L++++ + Sbjct: 601 RISGVSPADVAVLMVHLDR 619 >gi|305665798|ref|YP_003862085.1| glucose-inhibited division protein A [Maribacter sp. HTCC2170] gi|88710564|gb|EAR02796.1| glucose-inhibited division protein A [Maribacter sp. HTCC2170] Length = 622 Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust. Identities = 268/627 (42%), Positives = 385/627 (61%), Gaps = 21/627 (3%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M YDVIV+GGGHAG EAAA AA +G+ T L T TIG MSCNPA+GG+ KG +VR Sbjct: 1 MFGEEYDVIVVGGGHAGAEAAAAAANMGSKTLLATMNLQTIGQMSCNPAMGGIAKGQIVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADR----ELYRLAMQREILSQEN 116 EIDAL G G + D + IQF++LN KGPA+ PRTQ DR E +RLA++ + N Sbjct: 61 EIDALGGYSGIITDKSAIQFKMLNKSKGPAMWSPRTQNDRMRFAEEWRLALE----NTPN 116 Query: 117 LDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGD 176 +D Q ++G + N + + ++ +VVLT GTFL G+IHIG+ + GR G+ Sbjct: 117 VDFYQEMISGLLLDGNKVVGVRTSLGIDVKGKSVVLTNGTFLNGLIHIGEKQFGGGRAGE 176 Query: 177 SPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR 236 + + FD+GR+KTGTP R+DG+++ + K Q D FS++ + + Sbjct: 177 RAATGITEQLTDLGFDSGRMKTGTPPRVDGRSLDFSKMILQPGDTIPEKFSYLDTPVLTK 236 Query: 237 QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLE 296 Q +C +T T+ H ++ E + S +++G IKS GPRYCPSIEDKI RF +++ HQ+F+E Sbjct: 237 QRDCHMTHTSKLVHDLLKEGFERSPMFNGRIKSLGPRYCPSIEDKINRFADKDSHQLFVE 296 Query: 297 PEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLE 356 PEG +T VY NG ST+LPE++Q + +R++ G E V RPGYAIEYDY P +L TLE Sbjct: 297 PEGWDTVEVYVNGFSTSLPEDVQFKALRSVVGFENVKFFRPGYAIEYDYFPPTQLKHTLE 356 Query: 357 TKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 TK I L+ AGQINGTTGYEEAA+QGL+AGIN+ K N+ + R ++YIGV+IDDL Sbjct: 357 TKLIDNLYFAGQINGTTGYEEAASQGLMAGINAHLKLNEKEPFILKRDEAYIGVLIDDLI 416 Query: 417 SKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRS 476 +KG EPYRMFTSRAEYR LR DNAD RLTP ++G + R KR + ++ + Sbjct: 417 TKGTEEPYRMFTSRAEYRTLLRQDNADLRLTPKSHEIGLATDDRLKRMDEKKRKSDAFVQ 476 Query: 477 LLKSLVLTSKNL-----SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS- 530 KS + + + S S KQ K ++ S P ++ ++ + + S Sbjct: 477 FFKSTSVGPEAINPILESVDSSLVKQSDK---MFKVFSRPKVTMNHMLQLDSVSEFVSDN 533 Query: 531 ----LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSI 586 V+E+ +I+ Y+ Y ++ A ++ E IP +FDYS L +LS E +EKL Sbjct: 534 DLDREVMEQAEIQVKYSGYIQKEKNNADKLHRLENVKIPDNFDYSKLKSLSYEAREKLET 593 Query: 587 LKPFNLLQASKIEGMTPAALNLLLIYI 613 ++P + QAS+I G++P+ +++LL+++ Sbjct: 594 IRPVTISQASRISGVSPSDISVLLVFM 620 >gi|42519902|ref|NP_965832.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus johnsonii NCC 533] gi|81170550|sp|Q74H95|MNMG_LACJO RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|41584192|gb|AAS09798.1| glucose inhibited division protein A [Lactobacillus johnsonii NCC 533] gi|329668159|gb|AEB94107.1| glucose inhibited division protein A [Lactobacillus johnsonii DPC 6026] Length = 632 Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust. Identities = 258/618 (41%), Positives = 361/618 (58%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAG EAA +A++G T L+T + M CNP++GG KG +VREIDAL Sbjct: 9 YDVIVVGAGHAGVEAALASARMGEKTLLLTINLDMVAFMPCNPSVGGPAKGTVVREIDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ DA IQ R+LN KGPAVR R QAD+ Y M+ I ++ NL + Q Sbjct: 69 GGEMGKNIDATYIQMRMLNTGKGPAVRALRAQADKWQYHERMKDTIENEPNLTLRQAVAD 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + ++ + +VVLTTGT RG I IG+L +G PS L + Sbjct: 129 ELIVEDGVCKGLITNTGAKYYAKSVVLTTGTAARGKIIIGELAYSSGPNNSLPSIKLPEN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 K F R KTGTP R+DG TI + KT+++ D+ FS+ + Q+ C +T Sbjct: 189 LEKLGFKLRRFKTGTPPRVDGNTIDYSKTQEEPGDKEPRHFSYTSKDSDYLEDQMSCYMT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II N+ + ++SG IK GPRYCPSIEDK+VRF +++ HQIFLEPEG +T Sbjct: 249 YTNTVTHDIIRANLDRAPMFSGVIKGVGPRYCPSIEDKVVRFADKDRHQIFLEPEGRHTK 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y ST++PEE+Q + + ++ GLEK ++RPGYAIEYD I P +L TLETK I L Sbjct: 309 EIYVGDFSTSMPEEVQLKMLHSVAGLEKAELMRPGYAIEYDVIEPWQLKHTLETKNIKHL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ+NGT+GYEEAA QGL+AGIN+A + R ++YIGV+IDDL +KG EP Sbjct: 369 FTAGQMNGTSGYEEAAGQGLIAGINAALSAQNKPGFTLQRDEAYIGVLIDDLVTKGTNEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYN-FLRSLLKSLV 482 YR+ TSRAEYR+ LR DNAD RLT G +LG I E R K F Q + + ++ K + Sbjct: 429 YRLLTSRAEYRLLLRHDNADLRLTEKGHELGLISEDRYKEFQDKKQAISQAMEAIKKVTI 488 Query: 483 LTSKNLSSTSISFKQD--GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + + S KQD + +FL P + + + + V E+++I Sbjct: 489 HPTDEVQEYLASVKQDRLNAGVSGADFLKRPRVTFDAVERLSGETLATDRYVKEQVEIAL 548 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y ++ + E + IP D DY+++P+L+ E ++K ++P ++ QA +I G Sbjct: 549 KYEGYIKKEKTLVDRLHRLESKKIPVDIDYNAIPSLATEARQKFEKIRPESIAQAERISG 608 Query: 601 MTPAALNLLLIYIKKNTV 618 + PA L +L YI++ + Sbjct: 609 VNPADLAILTAYIQQGRI 626 >gi|323343709|ref|ZP_08083936.1| glucose inhibited division protein A [Prevotella oralis ATCC 33269] gi|323095528|gb|EFZ38102.1| glucose inhibited division protein A [Prevotella oralis ATCC 33269] Length = 625 Score = 476 bits (1226), Expect = e-132, Method: Compositional matrix adjust. Identities = 251/622 (40%), Positives = 366/622 (58%), Gaps = 15/622 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAGCEAA +A +GA T L+T + I MSCNPA+GG+ KG +VREIDAL Sbjct: 7 YDVIVVGGGHAGCEAATASANMGADTCLVTMDMNKIAQMSCNPAVGGIAKGQIVREIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG V D IQFR+LN KGPAV PR Q DRE + ++ + + NL + Q + Sbjct: 67 GGQMGHVTDETAIQFRMLNKGKGPAVWSPRAQCDREKFIWKWRQILDNTPNLSIWQDQAN 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + N I +R ++++T GTFL G++HIG+ ++ GR + + S Sbjct: 127 ELIVKNNEAVGIKTIWGVELRAKSIIITAGTFLNGLMHIGRHQVTGGRCAEPAVPNFTES 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 ++ R+KTGTP R+D +++ +++ E Q + FS+M + RQ+ C T Sbjct: 187 ITRWGIRAERMKTGTPVRIDKRSVHFEEMEIQPGENDFHQFSYMGNYRVLRQLPCWTCYT 246 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 E H I+ + + S +++G I+S GPRYCPSIE K+V F +++ H +FLEPEG +T+ + Sbjct: 247 TKECHDILHQGLADSPLFNGQIQSIGPRYCPSIETKLVTFPDKDQHPLFLEPEGEDTNEM 306 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG S+++P ++Q + I IP L I RPGYAIEYDY +P +L +LE+K I+GLF Sbjct: 307 YLNGFSSSMPMDVQLKAIHQIPALRDAKIYRPGYAIEYDYFDPTQLKHSLESKIIAGLFF 366 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ+NGTTGYEEA QGLVAG+N+A + R +SYIGV+IDDLT+KGV EPYR Sbjct: 367 AGQVNGTTGYEEAGGQGLVAGVNAALHCTNAEPFVMKRDESYIGVLIDDLTTKGVDEPYR 426 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAEYRI LR D+AD RLT LG ++ R+ +I++ N ++ +L TS Sbjct: 427 MFTSRAEYRILLRQDDADARLTEKSYTLGLA---KKDRYDWWIEKKNAIKHILNYCNNTS 483 Query: 486 KNLSSTSISFKQDGKTRTAY-----EFLSYPDFSIQNLFSICPDARKF-------SSLVI 533 + + G T + + P ++ L + P+ ++ +I Sbjct: 484 VKAKDINSALGAIGTTPLRMGCKISDLIGRPQVGLKYLANFIPELKEIINTPTNRKEEII 543 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E +I Y Y R+ + A++++ E I F Y L LS E ++KL + P L Sbjct: 544 EASEINIKYKGYIERERMIAEKMRRLEDIKIKDRFKYKELHELSTEARQKLERINPETLA 603 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I G++P+ +N+LLI + + Sbjct: 604 QASRIPGISPSDINVLLILLGR 625 >gi|325281348|ref|YP_004253890.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Odoribacter splanchnicus DSM 20712] gi|324313157|gb|ADY33710.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Odoribacter splanchnicus DSM 20712] Length = 627 Score = 476 bits (1225), Expect = e-132, Method: Compositional matrix adjust. Identities = 264/620 (42%), Positives = 366/620 (59%), Gaps = 10/620 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAA AA LG+ T LIT + I MSCNPAIGG+ KG +VREIDAL Sbjct: 8 YDVIVVGAGHAGCEAACAAAHLGSHTLLITLDMNKIAQMSCNPAIGGIAKGQIVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GL G V D + IQFR+LN KGPA+ PR+Q DR + + ++ + LD+ Q +V Sbjct: 68 GGLTGIVTDQSSIQFRMLNRSKGPAMWSPRSQCDRMKFSANWRYQLEHTDGLDMWQDDVV 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + + + + V+LT GTFL G++HIG++ GR+ + S+ L Sbjct: 128 ELVVKDGQVYGVKTALGVVFNAKRVILTNGTFLNGLMHIGRVSFEGGRISEPASHGLTAQ 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIE--CGIT 243 F+TGR+KTGTP R+DGK+I + K +Q D FS++ N I+ C + Sbjct: 188 LCSLGFETGRMKTGTPVRIDGKSIDFSKLTEQGGDNDFHCFSYLHYDYRNTLIQRPCYMA 247 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN H + + S +++G I+S GPRYCPSIE K+ F +R H +FLEPEG T Sbjct: 248 YTNEAVHHALRQGFTDSPLFNGTIQSVGPRYCPSIETKLNTFADRTSHHLFLEPEGETTT 307 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 Y NG S++LP ++Q +R I G E V I RPGYAIEYDY P +L+ TLETK I GL Sbjct: 308 EFYLNGFSSSLPWDVQLTGLRLIEGFENVRIFRPGYAIEYDYFPPTQLYHTLETKLIQGL 367 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGTTGYEEAAAQGL+AGIN+ + +R ++YIGV+IDDL +KGV EP Sbjct: 368 YFAGQINGTTGYEEAAAQGLMAGINAHLSLHSSVEFVLNRDEAYIGVLIDDLVTKGVDEP 427 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYRI LR D+AD RLTP G ++G + R K + I++ + L +K+ + Sbjct: 428 YRMFTSRAEYRILLRQDDADMRLTPKGFQIGLVTNNRHKIYLDKIEKRDLLIDFIKNFSV 487 Query: 484 TSKNLSSTSISFKQDG--KTRTAYEFLSYPDFSIQNLFSICPDARKF------SSLVIER 535 ++S +S + + LS P + L + P F +IE Sbjct: 488 KPDEINSFLLSLNTAPIRQGMKLVDILSRPQVGLLALIDVLPSLNNFIGEFVLRDEIIEA 547 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 +I Y+ Y R+ + A ++ E +I F+Y L LS E ++KLS ++P + QA Sbjct: 548 AEISIKYSGYIERERMLADKLSRLENLVIAGKFNYEELTNLSIEARQKLSKIQPRTIGQA 607 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G++PA +N+LLI + + Sbjct: 608 SRISGVSPADINVLLILMGR 627 >gi|259500782|ref|ZP_05743684.1| glucose-inhibited division protein A [Lactobacillus iners DSM 13335] gi|302190767|ref|ZP_07267021.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus iners AB-1] gi|259167476|gb|EEW51971.1| glucose-inhibited division protein A [Lactobacillus iners DSM 13335] Length = 630 Score = 476 bits (1225), Expect = e-132, Method: Compositional matrix adjust. Identities = 263/619 (42%), Positives = 364/619 (58%), Gaps = 7/619 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAA AA++G T L+T + M CNP++GG KG +VRE+DAL Sbjct: 9 YDVIVVGAGHAGCEAALAAARMGEKTLLLTINLDMVAFMPCNPSVGGPAKGTVVREVDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ DA +Q R+LN KGPAVR R QAD+ Y M+ I + NL + QG Sbjct: 69 GGQMGKNIDATYVQMRMLNTGKGPAVRALRAQADKWKYHEYMKNTIENTPNLTLRQGMAD 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E+ I ++ + +VVLT GT RG I IG+L +G PS L + Sbjct: 129 ELIVEEGICKGLITNTGAKYLAKSVVLTPGTATRGRIIIGELTYSSGPNNSLPSIKLAEN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 K F R KTGTP R+DG TI + KTE++ D+ FS+ T D Q+ C +T Sbjct: 189 LEKLGFKMRRFKTGTPPRVDGNTIDYSKTEEEPGDKEPRHFSYTTSDDDYLKDQLSCYMT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II +N+ + ++SG IK GPRYCPSIE KIVRF +++ HQIFLEPEG T Sbjct: 249 YTNPVTHEIIRKNLDRAPMFSGVIKGVGPRYCPSIESKIVRFADKDRHQIFLEPEGWKTR 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y ST++PEE+Q + + ++ GLEK ++RPGYAIEYD I P +L TLETK IS L Sbjct: 309 EIYVGDFSTSMPEEVQLKMLHSVAGLEKAEMMRPGYAIEYDVIEPWQLKHTLETKNISHL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ+NGT+GYEEAA QGL+AGIN+A + R ++YIGV+IDDL +KG EP Sbjct: 369 FTAGQMNGTSGYEEAAGQGLIAGINAALSAQNKPEFVLGRDEAYIGVLIDDLVTKGTNEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT G LG I E R + F + + +KS+ + Sbjct: 429 YRLLTSRAEYRLLLRHDNADLRLTEKGYNLGLISEERYQEFLRKKEAIATTMKNIKSITI 488 Query: 484 -TSKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 ++ + + KQD G A +FL P + + + V E+++I Sbjct: 489 HPTEEVQNYLKDIKQDALNGAVNGA-DFLKRPRVTFDAIEKLTGKKLAADRYVKEQVEIA 547 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y ++ I + E + IP+ DY+++P+L+ E ++K ++P ++ QA +I Sbjct: 548 LKYEGYIKKEKIMVDRLHRLESKKIPEGIDYAAIPSLATEARQKFEKIRPESIAQAERIS 607 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA L +L YI++ + Sbjct: 608 GVNPADLAVLTAYIQQGRI 626 >gi|259502138|ref|ZP_05745040.1| glucose-inhibited division protein A [Lactobacillus antri DSM 16041] gi|259169951|gb|EEW54446.1| glucose-inhibited division protein A [Lactobacillus antri DSM 16041] Length = 647 Score = 476 bits (1225), Expect = e-132, Method: Compositional matrix adjust. Identities = 261/620 (42%), Positives = 361/620 (58%), Gaps = 11/620 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAG EAA AA++G T L+T + M CNP++GG KG +VREIDAL Sbjct: 20 YDVIVVGAGHAGSEAALAAARMGNKTLLVTINLDMVAFMPCNPSVGGPAKGIVVREIDAL 79 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG D +Q R+LN KGPA+R R QAD+ Y M+ I ++ NL + QG V Sbjct: 80 GGEMGHNIDKTYVQMRMLNTGKGPAIRALRAQADKHAYHRQMKLTIENEPNLTLRQGTVD 139 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + ++ + VVLT GT RG I IG+L+ +G + L + Sbjct: 140 QLIVEDGVCQGVITNTGARYHAKAVVLTVGTAARGKIIIGELQYQSGPNNSKSAVKLSEN 199 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT----NRQIECG 241 + FD R KTGTP R++G TI + +TEKQ DE FSF T + Q+ C Sbjct: 200 LEELGFDLERFKTGTPPRVNGNTIKFAETEKQPGDEDPHHFSFDTPDSSYIAVTDQLACW 259 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN TH II N+ + ++SG IK GPRYCPSIEDKIVRF +++ HQ+FLEPEG + Sbjct: 260 LTYTNEGTHGIIRANLDRAPMFSGVIKGVGPRYCPSIEDKIVRFADKSRHQVFLEPEGRD 319 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 TD Y +GIST++PEE+Q + + +I GLE ++RPGYAIEYD + P +L PTLETK + Sbjct: 320 TDEYYLDGISTSMPEEVQQKIVHSIKGLEAAELMRPGYAIEYDVVAPYQLHPTLETKLVK 379 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 L+ AGQ NGT+GYEEAA QGLVAGIN+ ++ R+D+YIGVMIDDL +KG Sbjct: 380 NLYTAGQTNGTSGYEEAAGQGLVAGINAGLRAQGKGPFVLGRSDAYIGVMIDDLVTKGTK 439 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAEYR+ LR DNAD RL G +G + R + L+S+ Sbjct: 440 EPYRLLTSRAEYRLILRHDNADFRLMEKGHAVGLVSAERLAKMEAKKAAVAAEIKRLQSI 499 Query: 482 VLTSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICP-DARKFSSLVIER 535 + + ++ G R +A + + P Q L P A + VIE+ Sbjct: 500 KFKPSDEAVNDF-IEEHGDNRLKDAISAADLIKRPYVDYQTLTRFIPAPATELDRHVIEQ 558 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ YA Y ++ + +K E + IP + DY+ + L+ E ++KL ++P L QA Sbjct: 559 VEIQLKYAGYIKKEEQKVDRMKRMEAKRIPDNIDYNDIDGLATEGRQKLEKIRPETLAQA 618 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G+ PA L +L +YI++ Sbjct: 619 SRISGVNPADLAILSVYIRQ 638 >gi|323141444|ref|ZP_08076334.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Phascolarctobacterium sp. YIT 12067] gi|322414100|gb|EFY04929.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Phascolarctobacterium sp. YIT 12067] Length = 641 Score = 476 bits (1224), Expect = e-132, Method: Compositional matrix adjust. Identities = 267/627 (42%), Positives = 380/627 (60%), Gaps = 26/627 (4%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 I ++DVIV+G GHAG EAA AA+LG T L T + M CNP+IGG KGHLVRE Sbjct: 18 ITDTFDVIVVGAGHAGVEAALAAARLGGKTLLATLSLDNVALMPCNPSIGGPAKGHLVRE 77 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DAL G MG AD A IQ R+LN KG AV R Q D+ Y M++ + QENL++ Q Sbjct: 78 LDALGGQMGISADLACIQMRLLNTGKGYAVHALRGQEDKPFYHTLMKKIVEDQENLELKQ 137 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 + E + + + + V+L TGT+LRG I G++ G G + Sbjct: 138 LMIDKLLVENGAVVGVEAETGEVFEAKCVILATGTYLRGRIVYGQVNYECGPNGLRSAQK 197 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L S ++ + R KTGTPAR+D +++ + K E Q+ DE + FSF++D T Q+ C Sbjct: 198 LSASLLENGVELMRFKTGTPARIDARSLDYSKMEPQYGDEEVRNFSFISDIKTREQVPCY 257 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN TH+II +N+ S +Y+G I+ GPRYCPSIE KIVRF + HQ+F+EPEG + Sbjct: 258 LTYTNEATHKIIRDNLHLSGMYNGMIEGVGPRYCPSIESKIVRFANKERHQLFIEPEGRS 317 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ +Y G+S++LP IQ QF++TIPGLE ++R GYAI+YD ++P +L P+LE K IS Sbjct: 318 TNEMYVQGMSSSLPAHIQLQFMQTIPGLEHCKMMRAGYAIDYDCLDPLQLRPSLEHKAIS 377 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQ NGT+GYEEAAAQGL+AGIN+ K N + + R ++YIGV+IDDL +KG Sbjct: 378 GLFSAGQSNGTSGYEEAAAQGLMAGINAMMKINGREPLVLRRDEAYIGVLIDDLVTKGTS 437 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRM TSRAEYR+ LR DNAD RLT G +G + ++R F + R+ L+ Sbjct: 438 EPYRMMTSRAEYRLLLRQDNADLRLTEKGRAIGLVDDKRYGIFTEK-------RTALERT 490 Query: 482 V--LTSKNLSSTSISFKQDGKTRTA--------YEFLSYPDFS---IQNLFSICPDARKF 528 V L +N+S ++ + + TA + L + + +Q F + + Sbjct: 491 VSELGKQNISPSAENNAKLDAMGTAPLRSGSSLLDLLRRKEVTYSKLQQAFGLS----EL 546 Query: 529 SSLVIERLQIESSYAAYTGRQMIEAKE-IKFEEKRLIPKDFDYSSLPALSNELKEKLSIL 587 + V E+ +I + Y Y +Q E + +K E KRL P D DY ++ LS+E EKL + Sbjct: 547 APQVAEQAEIFAKYEGYITKQRQEVERFMKLENKRL-PDDIDYRAIKELSSEAAEKLDKV 605 Query: 588 KPFNLLQASKIEGMTPAALNLLLIYIK 614 +P N+ QAS+I G++PA +++L+I ++ Sbjct: 606 RPANIGQASRISGVSPADISVLMIALE 632 >gi|315654125|ref|ZP_07907041.1| glucose inhibited division protein A [Lactobacillus iners ATCC 55195] gi|315488821|gb|EFU78467.1| glucose inhibited division protein A [Lactobacillus iners ATCC 55195] Length = 630 Score = 476 bits (1224), Expect = e-132, Method: Compositional matrix adjust. Identities = 265/629 (42%), Positives = 365/629 (58%), Gaps = 27/629 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAA AA++G T L+T + M CNP++GG KG +VRE+DAL Sbjct: 9 YDVIVVGAGHAGCEAALAAARMGEKTLLLTINLDMVAFMPCNPSVGGPAKGTVVREVDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ DA +Q R+LN KGPAVR R QAD+ Y M+ I + NL + QG Sbjct: 69 GGQMGKNIDATYVQMRMLNTGKGPAVRALRAQADKWKYHEYMKNTIENTPNLTLRQGMAD 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E+ I ++ + +VVLT GT RG I IG+L +G PS L + Sbjct: 129 ELIVEEGICKGLITNTGAKYLAKSVVLTPGTATRGRIIIGELTYSSGPNNSLPSIKLAEN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 K F R KTGTP R+DG TI + KTE++ D+ FS+ T D Q+ C +T Sbjct: 189 LEKLGFKMRRFKTGTPPRVDGNTIDYSKTEEEPGDKEPRHFSYTTSDDDYLKDQLSCYMT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II +N+ + ++SG IK GPRYCPSIE KIVRF +++ HQIFLEPEG T Sbjct: 249 YTNPVTHEIIRKNLDRAPMFSGVIKGVGPRYCPSIESKIVRFADKDRHQIFLEPEGWKTR 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y ST++PEE+Q + + ++ GLEK ++RPGYAIEYD I P +L TLETK IS L Sbjct: 309 EIYVGDFSTSMPEEVQLKMLHSVAGLEKAEMMRPGYAIEYDVIEPWQLKHTLETKNISHL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ+NGT+GYEEAA QGL+AGIN+A + R ++YIGV+IDDL +KG EP Sbjct: 369 FTAGQMNGTSGYEEAAGQGLIAGINAALSAQNKPEFVLGRDEAYIGVLIDDLVTKGTNEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT G LG I E R + F + ++ + Sbjct: 429 YRLLTSRAEYRLLLRHDNADLRLTEKGHNLGLISEERYQEFLHKKE----------AIAM 478 Query: 484 TSKNLSSTSI-----------SFKQD---GKTRTAYEFLSYPDFSIQNLFSICPDARKFS 529 T KN+ + +I KQD G A +FL P + ++ + Sbjct: 479 TMKNIKAITIHPTEEVQNYLKDIKQDALNGAVNGA-DFLKRPRVTFDSIEKLTGKKLAAD 537 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 V E+++I Y Y ++ I + E + IP+ DY+++P+L+ E ++K ++P Sbjct: 538 RYVKEQVEIALKYEGYIKKEKIMVDRLHRLESKKIPEGIDYAAIPSLATEARQKFEKIRP 597 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKKNTV 618 ++ QA +I G+ PA L +L YI++ + Sbjct: 598 ESIAQAERISGVNPADLAVLTAYIQQGRI 626 >gi|126662719|ref|ZP_01733718.1| glucose-inhibited division protein A [Flavobacteria bacterium BAL38] gi|126626098|gb|EAZ96787.1| glucose-inhibited division protein A [Flavobacteria bacterium BAL38] Length = 623 Score = 475 bits (1223), Expect = e-132, Method: Compositional matrix adjust. Identities = 273/635 (42%), Positives = 383/635 (60%), Gaps = 32/635 (5%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M YDVIV+G GHAGCEAAA AA +G ST L+T I MSCNPA+GG+ KG +VR Sbjct: 1 MFLNQYDVIVVGAGHAGCEAAAAAANMGCSTLLVTMNLQNIAQMSCNPAMGGIAKGQIVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G G V+D IQF++LN KGPA+ PR Q+DR + + + + NLD Sbjct: 61 EIDALGGYSGIVSDKTAIQFKMLNKSKGPAMWSPRVQSDRMRFSDEWRTMLENTPNLDFY 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q VAG ++ I + I+ ++VVLT GTFL G+IHIG + GR G+S S Sbjct: 121 QEMVAGLLSDNGKIVGVKTSLGVEIKSTSVVLTNGTFLNGLIHIGDKQFGGGRAGESASF 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT---NRQ 237 + +K F++GR+KTGTP R+DG+++ + K +Q DE +P F +T Q Sbjct: 181 GITEDLVKLGFESGRMKTGTPPRVDGRSLDFSKMSEQPGDE--VPEKFSYSNLTAPLKTQ 238 Query: 238 IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 C ++ T+LE H I+ E S +++G IKS GPRYCPSIEDKI RF ++ HQ+F+EP Sbjct: 239 RSCWMSYTSLEVHDILREGFDRSPMFNGRIKSLGPRYCPSIEDKINRFADKERHQLFVEP 298 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EG T Y NG ST+LPE++Q + +R++ G E V RPGYAIEYDY P +L TLET Sbjct: 299 EGWTTCEYYINGFSTSLPEDVQFKALRSVAGFENVKFFRPGYAIEYDYFPPTQLQHTLET 358 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 K + GL+ AGQINGTTGYEEAA+QGL+AGIN+A K + R ++YIGV+IDDL + Sbjct: 359 KLVEGLYFAGQINGTTGYEEAASQGLMAGINAALKVQNREPFILKRDEAYIGVLIDDLIT 418 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR----QKRFAKYIQEYNF 473 KG EPYRMFTSRAEYR LR DNAD RLTP ++G E R +++F++ NF Sbjct: 419 KGTEEPYRMFTSRAEYRTLLRQDNADFRLTPKAFEIGLAKEERLIRMEQKFSQSDAMVNF 478 Query: 474 LR-SLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL- 531 R + LK + S Q K ++ S P ++ D RKF + Sbjct: 479 FRETSLKPEEANPILEAKGSAPMSQPDKM---FKVFSRPQLDLE-------DFRKFKKVA 528 Query: 532 -----------VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNEL 580 V+E+ +I+ Y+ Y ++ A ++ E +IP +F++ + ++S E Sbjct: 529 AYIEEHDLDQEVVEQAEIQVKYSGYIEKEKNNADKLTRLEDMVIPDNFNFDKIQSISIEA 588 Query: 581 KEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 K+KL+ ++P + QAS+I G++P+ +++LLIY+ + Sbjct: 589 KQKLNKIRPRTIAQASRISGVSPSDISVLLIYMGR 623 >gi|213963856|ref|ZP_03392104.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Capnocytophaga sputigena Capno] gi|213953536|gb|EEB64870.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Capnocytophaga sputigena Capno] Length = 623 Score = 475 bits (1223), Expect = e-132, Method: Compositional matrix adjust. Identities = 277/630 (43%), Positives = 381/630 (60%), Gaps = 22/630 (3%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M YDVIV+GGGHAG EAAA AA +GA T LIT I MSCNPA+GG+ KG +VR Sbjct: 1 MFTTEYDVIVVGGGHAGAEAAAAAANMGAQTLLITMNLQHIAQMSCNPAVGGIAKGQIVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G MG + D IQF++LN KGPA+ PR Q+DR + A + ++ S LD Sbjct: 61 EIDALGGYMGIITDKTAIQFKMLNQSKGPAMWSPRAQSDRMRFSEAWRLQLESLPTLDFF 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 QG V EK+ + + I+ +VVLT GTFL GV+HIG + GR+G+ + Sbjct: 121 QGMVNDLLIEKDRVVGVRTSLGVTIKAKSVVLTNGTFLNGVMHIGLKQFGGGRVGEPAAY 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIE 239 L ++ F+ GR+KTGTP R+D +++ + K Q DE FSF ++ K Q + Sbjct: 181 GLTECLVQHGFEAGRMKTGTPPRVDARSLDFTKMVPQPGDEHPQKFSFSSETKPLAVQKD 240 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +T T+ H I+ S ++ G I GPRYCPSIEDKI RF ++ HQIF+EPEG Sbjct: 241 CYMTYTSERVHNILRTGFDRSPMFQGIIHGVGPRYCPSIEDKINRFADKERHQIFVEPEG 300 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 +T +Y NG ST+LPEE+Q+ + + G EKV +RPGYAIEYDY P +L TLETK Sbjct: 301 WHTVEMYVNGFSTSLPEEVQYAALSQVAGFEKVKFLRPGYAIEYDYFPPTQLKHTLETKL 360 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I L+ AGQINGTTGYEEAAAQGL+AGIN+ K + + R ++YIGV+IDDL +KG Sbjct: 361 IENLYFAGQINGTTGYEEAAAQGLMAGINAVLKVREREPFILKRDEAYIGVLIDDLITKG 420 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR LR DNAD+RLTP+G ++G + E R + + ++ N + +K Sbjct: 421 TEEPYRMFTSRAEYRTLLRQDNADSRLTPLGYEIGTVSEERYRAWETKNRKVNEFITYIK 480 Query: 480 SLVLTSKNLSS-----TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIE 534 L +T ++ S KQ K + + LS PD ++ + SI + +S + E Sbjct: 481 ELSVTPDEVNPILEKYDSSPMKQGDKLQ---KVLSRPDVTLADFESI----DRIASYIKE 533 Query: 535 R---------LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 ++E YA Y ++ A ++ E IP +FDY + +LS E +EKL Sbjct: 534 NDLNEEEKTCAEVEVKYAGYIEKERNNADKLNRLESVRIPDNFDYDKIISLSFEGREKLK 593 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 ++P L QAS+I G++PA +++LLIY+ + Sbjct: 594 KIRPTTLSQASRISGVSPADISILLIYMGR 623 >gi|333029486|ref|ZP_08457547.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacteroides coprosuis DSM 18011] gi|332740083|gb|EGJ70565.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacteroides coprosuis DSM 18011] Length = 624 Score = 475 bits (1223), Expect = e-132, Method: Compositional matrix adjust. Identities = 260/623 (41%), Positives = 366/623 (58%), Gaps = 16/623 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAGCEAA AA+LG+ T LIT + I MSCNPAIGG+ KG +VREIDAL Sbjct: 5 YDVIVIGAGHAGCEAATAAARLGSKTCLITMDMNKIAQMSCNPAIGGIAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG + D IQFR+LN KGPA+ PR Q DR Y + + S +NLD+ Q V Sbjct: 65 GGEMGLITDRTAIQFRMLNRSKGPAMWSPRAQCDRNKYIWEWREVLDSTDNLDIWQDSVK 124 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + + + + ++++T GTFL G++H+GK ++P GRM + S L S Sbjct: 125 DLIIKDGQVIGVNTLWEATFYAKSIIITAGTFLNGLMHVGKTQLPGGRMAEPASYYLTES 184 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQIECGITR 244 + R+KTGTP R+D +++ ++ E Q D+ FSFM T K + C Sbjct: 185 INSYGIRFDRMKTGTPVRIDSRSVHFEDMEPQEGDDDFHKFSFMDTGKRHLDALPCWTCY 244 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T E+H + + + S +Y+G IKS GPRYCPS+E KIV F + HQ+FLEPEG+ T+ Sbjct: 245 TTPESHETLRKGLVDSPLYNGQIKSIGPRYCPSVETKIVNFPTKEKHQLFLEPEGVITNE 304 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y NG S++LP +IQ + +R IP V++ RPGYAIEYD+ +P +L TLE+K I LF Sbjct: 305 MYLNGFSSSLPMDIQLKALRQIPAFRDVHVYRPGYAIEYDFFDPTQLTHTLESKVIKNLF 364 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ+NGTTGYEEAA QGL+AGIN+ + R ++YIGV+IDDL +KGV EPY Sbjct: 365 FAGQVNGTTGYEEAAGQGLIAGINAHINCHGGKEFILGRDEAYIGVLIDDLVTKGVDEPY 424 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYRI LR D+AD RLTP LG R ++ ++ + + + + Sbjct: 425 RMFTSRAEYRILLRMDDADMRLTPKAWDLGLASRERYNLYSSKKEQIDRILEFANNYSVK 484 Query: 485 SKNLSST-----SISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARK-------FSSLV 532 ++ + S K K E L+ P + +N+ P ++ + Sbjct: 485 PAYINEALEKLGTTSLKHGCKL---IEVLTRPQITFENIQDSIPAFKEELDKIKGRREEI 541 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 IE +I Y+ Y R+ + A++ K E I FDYS + +LS E +EKL + P N+ Sbjct: 542 IEAAEILVKYSGYIEREKLIAEKTKRLENIKIRGKFDYSQIHSLSFEAREKLQKIDPENI 601 Query: 593 LQASKIEGMTPAALNLLLIYIKK 615 QAS+I G++P+ +N+LL+ ++K Sbjct: 602 AQASRIPGVSPSDINVLLVLVRK 624 >gi|300121848|emb|CBK22422.2| Glucose-inhibited division protein A [Blastocystis hominis] Length = 684 Score = 475 bits (1223), Expect = e-132, Method: Compositional matrix adjust. Identities = 285/656 (43%), Positives = 383/656 (58%), Gaps = 46/656 (7%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+VIGGGHAG EAAA AA++G TAL+T STIG MSCNP++GG+GKGHL+REIDAL Sbjct: 35 YDVVVIGGGHAGVEAAAAAARMGVKTALVTTNFSTIGEMSCNPSMGGIGKGHLIREIDAL 94 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG--- 122 DGL+GR+ D GIQFRVLN +GPAV GPR Q DR+LY+ MQ+ I + NL VI+ Sbjct: 95 DGLIGRMTDYGGIQFRVLNASRGPAVHGPRAQVDRDLYKKHMQQAIRNYPNLTVIEDGAH 154 Query: 123 -----------EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPA 171 + + I +V + I CS VVL TGTFL GV HIGK +PA Sbjct: 155 VPLPFSASSHPQEFEMDASNKTIHGVVTRKGQHIHCSAVVLCTGTFLHGVCHIGKWNVPA 214 Query: 172 GRMG------DSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP 225 GR D PS L + R TGTP RL +I W + Q +D +P Sbjct: 215 GRFHRDTLNVDPPSIHLADFLHSLHLPIERFTTGTPPRLHRDSIDWSRLATQASDAPAVP 274 Query: 226 FSFMT----DKITN--RQIECGITRTNLETHRIIMENIKHSAIYSGDI-KSYGPRYCPSI 278 SF+ D I N R + C T TN ETH I + ++G+ K GPRYCPSI Sbjct: 275 LSFLNIYAGDFIPNQSRLLRCATTYTNEETHAICNAHRGELPSFTGNRGKGQGPRYCPSI 334 Query: 279 EDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPG 338 E K++RF E+ H I+LEPEGL T VVYPNG++TA E Q + +RT+ GLE V+++RPG Sbjct: 335 EKKVLRFPEKKRHLIWLEPEGLETPVVYPNGLATAYDAETQLKLLRTMRGLEHVDMLRPG 394 Query: 339 YAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDC 398 YA+EYDY++P L P + ++ LFLAGQINGTTGYEEAAAQG++AGIN+AR+ Sbjct: 395 YAVEYDYVDPAVLTPAFRLRLLANLFLAGQINGTTGYEEAAAQGIMAGINAARQVMGKPA 454 Query: 399 ICFSRTDSYIGVMIDDLTSKG-----VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKL 453 + R+ + IGV+ DDLT G EP+RMFTSR+EYRI++R DNAD RLT G + Sbjct: 455 VILERSRAMIGVLTDDLTRGGYRTDLTREPFRMFTSRSEYRITVRADNADLRLTEWGYQE 514 Query: 454 GCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDF 513 G +GE R +F + +E LK+ LSS + K +A++ ++YP Sbjct: 515 GIVGEERYAKFMEKKEELLKCNEFLKAY-----RLSSEEWGLPGEHKYISAFDAMAYPKI 569 Query: 514 SIQNLFSICPDARKFSSL------VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKD 567 SI+ + I + + + L V + L I + Y Y +Q + IP++ Sbjct: 570 SIKTVEDIIRNKQGDTVLNHTTRGVKQTLYITAKYGVYLEKQKKDIDLFNRSNGLKIPEN 629 Query: 568 FDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK--NTVKLN 621 FD+S+LP +S E K+KL KP ++ + I G+ P+ ++ I+K N V+ N Sbjct: 630 FDFSALP-ISQEEKDKLMDTKPSSIEEVKHILGIKPSTFLFIIKAIRKSGNEVEQN 684 >gi|120437623|ref|YP_863309.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Gramella forsetii KT0803] gi|205831516|sp|A0M6J7|MNMG_GRAFK RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|117579773|emb|CAL68242.1| glucose inhibited division protein A [Gramella forsetii KT0803] Length = 623 Score = 475 bits (1223), Expect = e-132, Method: Compositional matrix adjust. Identities = 268/626 (42%), Positives = 385/626 (61%), Gaps = 18/626 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M + YDVIV+G GHAG EAAA AA +G+ T LIT I MSCNPA+GG+ KG +VR Sbjct: 1 MFEKQYDVIVVGAGHAGSEAAAAAANMGSKTLLITMNLQNIAQMSCNPAMGGIAKGQIVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDA+ G G V+D + IQF++LN KGPA+ PR Q+DR + + ++ NLD Sbjct: 61 EIDAMGGYSGIVSDTSAIQFKMLNKSKGPAMWSPRVQSDRMRFAEDWRLKLEGTPNLDFY 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q VAG E + + + + +VV T GTFL G+IHIG + GR G+ + Sbjct: 121 QEMVAGLIIENDKVIGVRTSLGLEVFAKSVVCTNGTFLNGLIHIGDKQFGGGRAGERAAT 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIE 239 + ++ F+ GR+KTGTP R+DG+++ + K +Q D+ FS+ + K ++Q Sbjct: 181 GITKDLIEVGFEAGRMKTGTPPRVDGRSLDYSKMTEQPGDDIPGKFSYSDETKPLSKQRS 240 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +T T+ E H I+ E S +++G I+S GPRYCPSIEDKI RF +++ HQ+F+EPEG Sbjct: 241 CHMTYTSNEVHDILKEGFDRSPMFNGRIQSIGPRYCPSIEDKINRFADKDRHQLFVEPEG 300 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 NT VY NG ST+LPE++Q + +R++ G E V RPGYAIEYDY P +L TLETK Sbjct: 301 WNTVEVYVNGFSTSLPEDVQFKALRSVAGFENVKFFRPGYAIEYDYFPPTQLKHTLETKL 360 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 + GL+ AGQINGTTGYEEAA QG++AGIN+A K + D R ++YIGV+IDDL +KG Sbjct: 361 VEGLYFAGQINGTTGYEEAACQGMMAGINAALKVQEKDEFILKRNEAYIGVLIDDLITKG 420 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFA----KYIQEYNFLR 475 EPYRMFTSRAEYR LR DNAD RLT LG E+R ++ K ++ +L+ Sbjct: 421 TEEPYRMFTSRAEYRTLLRQDNADFRLTERSYNLGLASEKRMRKMEEKKDKSLKFVQYLK 480 Query: 476 SLLKSLVLTSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNL--FSICPD---ARK 527 L S+V N S KQ K ++ S P +++++ FS + + Sbjct: 481 DL--SVVPEEANPVLEKRNSSPMKQSDK---VFKVFSRPQITMEDVKNFSGVEEFISENE 535 Query: 528 FSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSIL 587 + +IE+ +I+ Y+ Y ++ A ++ E IPK+FDYS++ ++S E +EKL + Sbjct: 536 LNEEMIEQTEIQVKYSGYIEKEKNNADKLNRLEDMKIPKNFDYSNIKSMSYEAREKLKKV 595 Query: 588 KPFNLLQASKIEGMTPAALNLLLIYI 613 +P + QAS+I G++P +++LL+Y+ Sbjct: 596 QPATVSQASRISGVSPNDISVLLVYM 621 >gi|102139963|gb|ABF70103.1| glucose-inhibited division A family protein [Musa balbisiana] Length = 730 Score = 475 bits (1223), Expect = e-132, Method: Compositional matrix adjust. Identities = 271/621 (43%), Positives = 381/621 (61%), Gaps = 12/621 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 I YDVIV+GGGHAGCEAA AA+LGA T L+T I CNPA+GG K LV E Sbjct: 76 IEEQYDVIVVGGGHAGCEAALAAARLGARTLLLTLNIDRIAWQPCNPAVGGPAKSQLVHE 135 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DAL G +G++AD +Q RVLN KGPAVR R Q D+ Y L M++ + S NL + + Sbjct: 136 VDALGGEIGKIADRCYLQKRVLNRSKGPAVRALRAQTDKREYALEMKKVVESTTNLFIRE 195 Query: 122 GEVAGFNTEKNIISSIVMQDNSM-IRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 V KN V M +VVLTTGTF+ G I +G+ + AGR G+S S+ Sbjct: 196 AMVTNILVGKNDTVEGVSTFFGMNFYAPSVVLTTGTFMSGKIWVGRTSMAAGRAGESASH 255 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIE 239 L S + F+T RLKTGTPAR+D +++ + E Q DE + FSF D + Q+ Sbjct: 256 GLTESLQQLGFETDRLKTGTPARVDYRSVNFSGLEPQHGDEEVNWFSFDPDYHVEREQMC 315 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +TRT +TH++I +N+ + Y G +++ GPRYCPSIEDKIVRF +++ HQIFLEPEG Sbjct: 316 CYLTRTTKDTHQLIKDNLHETPTYGGWVEAKGPRYCPSIEDKIVRFQDKDSHQIFLEPEG 375 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 +Y G ST LPE +Q +RT+PGLE ++RP YA+EYDY+ + +L TKK Sbjct: 376 RTVPELYVQGFSTGLPERLQLTLLRTLPGLENCLMLRPAYAVEYDYLPAHQCSRSLMTKK 435 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF +GQINGTTGYEEAAAQGLV+GIN+AR S+ I R SYIG +IDDL +K Sbjct: 436 IEGLFFSGQINGTTGYEEAAAQGLVSGINAARHSDGKSIIILERESSYIGTLIDDLVTKD 495 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR----QKRFAKYIQEYNFLR 475 + EPYRM TSR+E+R+ LR DNAD+RLTP+G +G I ERR Q + + ++E + Sbjct: 496 LREPYRMLTSRSEHRLLLRADNADSRLTPLGWDIGLIDERRWNLYQLKQTRILEE----K 551 Query: 476 SLLKSLVLTSKNLSS--TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVI 533 LKS+ ++ + ++ + +S + + + L P + L S + Sbjct: 552 ERLKSVRISGGDFAAEVSHLSGQPVKDSSSLESILKKPHVEYKVLDKHGYGNELLSRIEK 611 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E ++I+ YA + RQ + ++I ++ + +P+D DY S+ LS E +EKLS ++P + Sbjct: 612 ECVEIDIKYAGFIARQRSQLQQIVNQQHKRLPEDLDYYSMTTLSLEAREKLSKVRPQTIG 671 Query: 594 QASKIEGMTPAALNLLLIYIK 614 QAS++ G++PA + LLI ++ Sbjct: 672 QASRVGGVSPADMTALLICLE 692 >gi|148269797|ref|YP_001244257.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Thermotoga petrophila RKU-1] gi|281412319|ref|YP_003346398.1| glucose inhibited division protein A [Thermotoga naphthophila RKU-10] gi|205831566|sp|A5IKF8|MNMG_THEP1 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|147735341|gb|ABQ46681.1| glucose inhibited division protein A [Thermotoga petrophila RKU-1] gi|281373422|gb|ADA66984.1| glucose inhibited division protein A [Thermotoga naphthophila RKU-10] Length = 626 Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust. Identities = 263/621 (42%), Positives = 377/621 (60%), Gaps = 11/621 (1%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 +R YDVIV+G GHAG EAA AA++G ++ T+G CNPAIGG KG +VREI Sbjct: 6 DRVYDVIVVGAGHAGIEAALAAARMGFRVLVLAVNPDTVGWAPCNPAIGGPAKGVVVREI 65 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G M + D I R+LNV KGPAVR R Q D+ LY M+R++ + N+ + G Sbjct: 66 DALGGEMAKTTDETMINIRMLNVSKGPAVRALRAQIDKILYSRTMKRKLETNPNIVLRHG 125 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRC--STVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 V TEK + +V DN I V++TTGTFLRG I IG+ PAGRMG+ P+ Sbjct: 126 IVEKILTEKGKVKGVV--DNYGIDYLGKAVIVTTGTFLRGKIFIGRSTFPAGRMGEFPAT 183 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIE 239 L S ++ F+ GR KTGTPAR+ ++I + E+Q + + FSF + ++ + Sbjct: 184 KLTESLIELGFEVGRFKTGTPARVLKRSINFSVMERQDTSDEPLAFSFFDEPRVLPKDYP 243 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGD--IKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 C +TRTN ETH II + ++ S +Y I+ GPRYCPSIEDK+V+F ++ HQ+F+EP Sbjct: 244 CWLTRTNPETHSIIRQYLEFSPLYGTVKLIEGVGPRYCPSIEDKVVKFKDKESHQVFVEP 303 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EG +T+ Y NG+ST+LP E Q + IR++ GLE I RP YAIEYDYI+P++L+PTLE+ Sbjct: 304 EGRDTEEYYLNGLSTSLPYEAQIKMIRSVKGLENAIITRPAYAIEYDYIDPRQLYPTLES 363 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 K + L+ AGQ+NGT+GYEEAA QG++AGIN+A K + R+++YIGV+IDDL + Sbjct: 364 KLVENLYFAGQVNGTSGYEEAAGQGIIAGINAALKLRGESPLILKRSEAYIGVLIDDLVT 423 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYN-FLRS 476 +GV EPYR+ TSRAEYR+ LR DNA RL G ++G I + ++ + N + Sbjct: 424 RGVDEPYRLLTSRAEYRLLLRHDNAHLRLAKYGYRVGLIPKWFYEKVLSLERRINEEIER 483 Query: 477 LLKSLVLTSKNLSS--TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIE 534 L K V S ++ TS+ ++ + Y L P S L + P+ V+E Sbjct: 484 LKKVAVKPSDRINDLLTSLGTSPLKESVSLYHLLKRPQLSYSTLKFLDPNPMD-DPEVVE 542 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I Y Y + E + E +P D DY ++P LS E K+KL ++P ++ Q Sbjct: 543 QVEINVKYEGYIQKMFEEVAVFEKYENYEVPYDLDYDAVPNLSTEAKDKLKKIRPRSIGQ 602 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 A +I G+ P+ ++ L+IY+ K Sbjct: 603 AMRIPGINPSDISNLIIYLDK 623 >gi|223983477|ref|ZP_03633663.1| hypothetical protein HOLDEFILI_00943 [Holdemania filiformis DSM 12042] gi|223964649|gb|EEF68975.1| hypothetical protein HOLDEFILI_00943 [Holdemania filiformis DSM 12042] Length = 620 Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust. Identities = 260/620 (41%), Positives = 363/620 (58%), Gaps = 11/620 (1%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALD 66 DVIV+GGGHAG EAA + A+LG TALI+ IG M CNP++GG KG +VREIDAL Sbjct: 3 DVIVVGGGHAGIEAALITARLGCETALISLSLENIGKMPCNPSVGGPAKGIVVREIDALG 62 Query: 67 GLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAG 126 G MG AD +QF++LN KGP V+ R Q+D+ Y MQ EI QE L +I G G Sbjct: 63 GQMGITADQTALQFKMLNTTKGPGVQSLRVQSDKLAYARRMQEEIQRQERLRLILGICTG 122 Query: 127 FNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSF 186 E I+ I M+D ++ V+LTTGT++ + I P+G G+ +N L S Sbjct: 123 ILVENGKITGITMEDGQILEARAVILTTGTYMSSSVMISSEVTPSGPDGEPTTNKLSESL 182 Query: 187 MKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIE--CGITR 244 + T RLKTGTP R+ ++I + KT Q ++ + FS T I + + C +T Sbjct: 183 RQAGLKTFRLKTGTPPRVLTESIDFSKTTPQPGTDQFVAFSTTTQTIRKPEDQKLCYLTY 242 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T +TH +I+ N+K S++YSG +K GPRYCPSIEDK+VRF ++ HQIFLEPE D Sbjct: 243 TTPQTHELILANLKKSSMYSGVVKGVGPRYCPSIEDKLVRFSDKPRHQIFLEPESEALDT 302 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 Y G ST+LP ++Q + ++PGLE I + YAIEYD I+P +L P+LET + LF Sbjct: 303 TYVQGFSTSLPRDLQELMVHSLPGLEHAVIRKYAYAIEYDAIDPLQLKPSLETLVVENLF 362 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAAAQGL+AGIN+ K + R ++YIGVMIDDL +KG EPY Sbjct: 363 TAGQINGTSGYEEAAAQGLMAGINAVLKLRNQPPLVLRRDEAYIGVMIDDLVTKGTQEPY 422 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAE+R+ LR DNAD RL G +LG I E R + + + L+ LK+ LT Sbjct: 423 RLLTSRAEFRLLLRHDNADQRLMRYGYELGSISEPRWQDYQHRRAQVEQLKEQLKTCRLT 482 Query: 485 SKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 K+ L + DG +A E + P ++ L F + +IE Sbjct: 483 PKSPIQDALEEVGYAALTDGV--SAEELVRRPHITVAMLKPAL--DFDFDPAAAAQAEIE 538 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + EA+++ + ++P+D DY + LS E ++KL ++P L QAS+I Sbjct: 539 LKYEGYINKARKEAEKMMAMDHVVLPEDLDYDQVQHLSLEGRQKLKAIQPHTLGQASRIS 598 Query: 600 GMTPAALNLLLIYIKKNTVK 619 G++PA + +L + +++ K Sbjct: 599 GVSPADVAMLAMVLEQRHRK 618 >gi|260591942|ref|ZP_05857400.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prevotella veroralis F0319] gi|260536226|gb|EEX18843.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prevotella veroralis F0319] Length = 623 Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust. Identities = 259/623 (41%), Positives = 367/623 (58%), Gaps = 17/623 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+VIGGGHAGCEAA AA +GA T LIT + IG MSCNPAIGG+ KG +VREIDAL Sbjct: 5 YDVLVIGGGHAGCEAATAAANMGAMTCLITMDMNKIGQMSCNPAIGGIAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG V DA IQFR+LN KGPAV PR Q DR + + + +NLD+ Q + Sbjct: 65 GGYMGLVTDATAIQFRMLNRSKGPAVWSPRAQCDRGKFIWEWRTRLDHTDNLDIFQDQAD 124 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + N + I + TV++T GTFL G++HIGK K+ GR + ++ S Sbjct: 125 ELLVDNNKVLGIKTIWGIDLYARTVIITAGTFLNGLMHIGKRKVEGGRCAEPAVHNFTES 184 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + + R+KTGTP R+D +++ +++ E Q + FS+ Q+ C T Sbjct: 185 ITRHGIRSARMKTGTPVRIDRRSVHFEEMEPQPGESDYHQFSYHGQYRHLPQLPCWTCNT 244 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N E H ++ + S +++G I+S GPRYCPSIE K+V F +++ H +FLEPEG +T+ + Sbjct: 245 NEEVHDVLRSGLAESPLFNGQIQSTGPRYCPSIETKLVTFPDKDSHPLFLEPEGTDTNEM 304 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG S+++P +IQ I IP L I RPGYAIEYDY +P +L +LE+K I GLF Sbjct: 305 YLNGFSSSMPWDIQLSAIHKIPALRDAKIYRPGYAIEYDYFDPTQLKHSLESKIIDGLFF 364 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ+NGTTGYEEA QG+VAGIN+A D R +SYIGV+IDDLT+KGV EPYR Sbjct: 365 AGQVNGTTGYEEAGGQGIVAGINAALLCTGKDPFIMKRDESYIGVLIDDLTTKGVDEPYR 424 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAEYRI LR D+AD RLT +G ++ R+ +IQ+ + +L TS Sbjct: 425 MFTSRAEYRILLRQDDADARLTERAYNIGIA---KRDRYDWWIQKKENIDRILNYCNTTS 481 Query: 486 KNLSSTSISFKQ------DGKTRTAYEFLSYPDFSIQNLFSICPDARKF-------SSLV 532 + + Q G T+ + ++ P + +NL ++ P+ ++ + Sbjct: 482 VKPTEVNDFLVQLGTSPIKGSTKIT-DLVARPQVNFENLSAVMPNLKEVIETTPNRKEEI 540 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 E +I+ Y Y R+ + A+++ E I F YS L LS E ++KL ++P L Sbjct: 541 AEAAEIKLKYKGYIDRERVFAEKMHRLEDIKIKGHFKYSELHDLSTECRQKLEHIQPETL 600 Query: 593 LQASKIEGMTPAALNLLLIYIKK 615 QAS+I G++P+ +N+LL+ + + Sbjct: 601 AQASRIPGVSPSDINVLLVLMGR 623 >gi|309804043|ref|ZP_07698124.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus iners LactinV 11V1-d] gi|308163811|gb|EFO66077.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus iners LactinV 11V1-d] Length = 630 Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust. Identities = 263/619 (42%), Positives = 363/619 (58%), Gaps = 7/619 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAA AA++G T L+T + M CNP++GG KG +VRE+DAL Sbjct: 9 YDVIVVGAGHAGCEAALAAARMGEKTLLLTINLDMVAFMPCNPSVGGPAKGTVVREVDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ DA +Q R+LN KGPAVR R QAD+ Y M+ I + NL + QG Sbjct: 69 GGQMGKNIDATYVQMRMLNTGKGPAVRALRAQADKWKYHEYMKNTIENTPNLTLRQGMAD 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E+ I ++ + +VVLT GT RG I IG+L +G PS L + Sbjct: 129 ELIVEEGICKGLITNTGAKYLAKSVVLTPGTATRGRIIIGELTYSSGPNNSLPSIKLAEN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 K F R KTGTP R+DG TI + KTE++ D+ FS+ T D Q+ C +T Sbjct: 189 LEKLGFKMRRFKTGTPPRVDGNTIDYSKTEEEPGDKEPRHFSYTTSDDDYLKDQLSCYMT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II +N+ + ++SG IK GPRYCPSIE KIVRF +++ HQIFLEPEG T Sbjct: 249 YTNPVTHEIIRKNLDRAPMFSGVIKGVGPRYCPSIESKIVRFADKDRHQIFLEPEGWKTR 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y ST++PEE+Q + + ++ GLEK ++RPGYAIEYD I P +L TLETK IS L Sbjct: 309 EIYVGDFSTSMPEEVQLKMLHSVAGLEKAEMMRPGYAIEYDVIEPWQLKHTLETKNISHL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ+NGT+GYEEAA QGL+AGIN+A + R ++YIGV+IDDL +KG EP Sbjct: 369 FTAGQMNGTSGYEEAAGQGLIAGINAALSAQNKPEFVLGRDEAYIGVLIDDLVTKGTNEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT G LG I E R + F + +KS+ + Sbjct: 429 YRLLTSRAEYRLLLRHDNADLRLTEKGYNLGLISEERYQEFLHKKEAIATTMKNIKSITI 488 Query: 484 -TSKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 ++ + + KQD G A +FL P + + + V E+++I Sbjct: 489 HPTEEVQNYLKDIKQDALNGAVNGA-DFLKRPRVTFDAIEKLTGKNLAADRYVKEQVEIA 547 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y ++ I + E + IP+ DY+++P+L+ E ++K ++P ++ QA +I Sbjct: 548 LKYEGYIKKEKIMVDRLHRLESKKIPEGIDYAAIPSLATEARQKFEKIRPESIAQAERIS 607 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA L +L YI++ + Sbjct: 608 GVNPADLAVLTAYIQQGRI 626 >gi|185178729|ref|ZP_02964544.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188024346|ref|ZP_02997018.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188518461|ref|ZP_03003948.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|188524182|ref|ZP_03004246.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|198273495|ref|ZP_03206031.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209554149|ref|YP_002284456.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225551143|ref|ZP_03772089.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|226700965|sp|B5ZAL6|MNMG_UREU1 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|184209330|gb|EDU06373.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188018610|gb|EDU56650.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188998104|gb|EDU67201.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|195659997|gb|EDX53377.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|198250015|gb|EDY74795.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209541650|gb|ACI59879.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225378958|gb|EEH01323.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ureaplasma urealyticum serovar 8 str. ATCC 27618] Length = 614 Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust. Identities = 247/614 (40%), Positives = 369/614 (60%), Gaps = 7/614 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIG GHAG EAA + L TALIT IG M CNP+IGG KG + REID Sbjct: 2 KKYDVIVIGAGHAGLEAAFATSNLNLQTALITLDEKGIGMMPCNPSIGGPAKGIVTREID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G+ G+ ADA +Q ++LN KGP V R Q D+ Y+ +++I Q+NLD+I E Sbjct: 62 ALGGIQGKAADATTMQMKILNSSKGPGVWAIRAQIDKIAYQRWFKQQIKQQKNLDLIIAE 121 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V+ E NI+ +++ D +I+ V++TTGT+L+ + H G + + G G + L Sbjct: 122 VSDLLVENNIVKGVILSDQKIIQADYVIITTGTYLKSITHRGSVCVDEGADGTKNAKFLS 181 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KITNRQIECG 241 + +K F+ RLKTGTPAR+ +I + + + I FS K ++Q+ C Sbjct: 182 DVLVKLGFELIRLKTGTPARIKKDSIDFTNMVLEPGTNQKIAFSHYHPVYKPYDKQLPCH 241 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 I TN +TH+II EN+ SA+Y G I GPRYCPSIEDKIV+F E+ HQIF+EPE Sbjct: 242 IIYTNEQTHQIIRENLNKSAMYGGMISGIGPRYCPSIEDKIVKFSEKPRHQIFVEPESYE 301 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 D +Y G ST++P ++Q + IR++PGLE I++ YAIEYD I+P +L+P+LE+K ++ Sbjct: 302 LDSMYLGGFSTSMPIDVQEKMIRSLPGLEDCEILKYAYAIEYDAIDPTQLYPSLESKLVN 361 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 LF AGQINGT+GYEEAAAQGL+A IN ++K + I R +YIGVMIDD+ +KGV+ Sbjct: 362 NLFFAGQINGTSGYEEAAAQGLMAAINVSQKHKNKEPIVLGRDQAYIGVMIDDIVTKGVV 421 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAE+R++LR DNAD+RL IG ++G + ++ +++ N + + LK+ Sbjct: 422 EPYRLLTSRAEHRLALRNDNADDRLMKIGFEIGLLKPEVYDQYLNNLKQINEVLNWLKTT 481 Query: 482 VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 + + + F ++L P+ + +L CP + +I ++QI+ Sbjct: 482 TVGQID----DLKFTTLKTNSYLIDYLKRPEVKLNDLLIYCP-IKIEDEQIINKVQIQVK 536 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 + Y Q K++K + DY +P +S E +KL+ +KP +L QAS+I G+ Sbjct: 537 FEGYIKNQEENLKQLKRLNNIKLHGIVDYKEVPNISLETIDKLNKIKPLDLEQASRISGV 596 Query: 602 TPAALNLLLIYIKK 615 + ++ Y+++ Sbjct: 597 NLTDIAMIKYYLER 610 >gi|225550750|ref|ZP_03771699.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225379904|gb|EEH02266.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 614 Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust. Identities = 249/614 (40%), Positives = 369/614 (60%), Gaps = 7/614 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIG GHAG EAA + L TALIT IG M CNP+IGG KG + REID Sbjct: 2 KKYDVIVIGAGHAGLEAAFATSNLNLQTALITLDEKGIGMMPCNPSIGGPAKGIVTREID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G+ G+VADA +Q ++LN KGP V R Q D+ Y+ +++I Q+NLD+I E Sbjct: 62 ALGGIQGKVADATTMQMKILNSSKGPGVWAIRAQIDKIAYQRWFKQQIKQQKNLDLIIAE 121 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V+ E NI+ +++ D +I+ V++TTGT+L+ + H G + + G G + L Sbjct: 122 VSDLLVENNIVKGVILSDQKIIQADYVIITTGTYLKSITHRGSVCVDEGADGTKNAKFLS 181 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KITNRQIECG 241 ++ +K F+ RLKTGTPAR+ +I + + + I FS K ++Q+ C Sbjct: 182 DALVKLGFELIRLKTGTPARIKKDSIDFINMVLEPGTNQKIAFSHYHPVYKPYDKQLPCH 241 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 I TN +TH+II EN+ SA+Y G I GPRYCPSIEDKIV+F E+ HQIF+EPE Sbjct: 242 IIYTNEQTHQIIRENLNKSAMYGGMISGIGPRYCPSIEDKIVKFSEKPRHQIFVEPESYE 301 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 D +Y G ST++P ++Q + IR++PGLE I++ YAIEYD I+P +L+P+LE+K + Sbjct: 302 LDSMYLGGFSTSMPIDVQEKMIRSLPGLENCEILKYAYAIEYDAIDPTQLYPSLESKLVK 361 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 LF AGQINGT+GYEEAAAQGL+A IN +K + + R +YIGVMIDD+ +KGV+ Sbjct: 362 NLFFAGQINGTSGYEEAAAQGLMAAINVNQKYQNKEPVILGRDQAYIGVMIDDIVTKGVV 421 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAE+R++LR DNAD+RL IG K+G + + + + +Y+ ++ +L L Sbjct: 422 EPYRLLTSRAEHRLALRNDNADDRLMKIGFKIGLL---KPEVYDQYLNNLKQIKEILNWL 478 Query: 482 VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 T+ + F ++L P+ + +L CP + +I ++QI+ Sbjct: 479 KTTTVG-QIDDLKFTTLKTNSYLIDYLKRPEIKLNDLLIYCP-IKIEDEQIINKVQIQVK 536 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 + Y Q K++K + DY +P +S E +KL+ +KP +L QAS+I G+ Sbjct: 537 FEGYIKNQEENLKQLKRLNNIKLHGIVDYKEVPNISLETIDKLNKIKPLDLEQASRISGV 596 Query: 602 TPAALNLLLIYIKK 615 + ++ Y+++ Sbjct: 597 NLTDIAMIKYYLER 610 >gi|170590250|ref|XP_001899885.1| Hypothetical 71.7 kDa protein F52H3.2 in chromosome II, putative [Brugia malayi] gi|158592517|gb|EDP31115.1| Hypothetical 71.7 kDa protein F52H3.2 in chromosome II, putative [Brugia malayi] Length = 638 Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust. Identities = 284/623 (45%), Positives = 383/623 (61%), Gaps = 18/623 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAGCEAAA AA+ A T L+T++ TIG MSCNP+ GG+GKGHL+RE+DAL Sbjct: 18 YDVIVIGGGHAGCEAAAAAARCCAHTLLLTNRKDTIGEMSCNPSFGGVGKGHLIREVDAL 77 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILS-QENLDVIQGEV 124 DGL GR+ D + I + LN GPAV G R Q DR+LY+ MQ EIL+ +NLDV++ V Sbjct: 78 DGLCGRICDKSAINYHALNSSHGPAVLGLRAQIDRKLYKEYMQHEILNCTKNLDVMEKAV 137 Query: 125 AG----FNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 + K V+ D ++ +V+TTGTFL G + G AGR+G+ S+ Sbjct: 138 DDLVIKYEEGKTPRVGGVVADGEILNAKALVVTTGTFLGGKLFRGSESYAAGRLGEKASS 197 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT---NRQ 237 L +F + F GR +TGTPARL TI + K Q D + IPFSF+T+ I+ ++Q Sbjct: 198 KLSETFSRLGFKLGRFRTGTPARLFKNTIDFSKFAAQRPDRKPIPFSFLTEHISLPYHQQ 257 Query: 238 IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 + + TN ++++++ + + GPRYCPS+E K++RF N H+IFLEP Sbjct: 258 LPSYLGFTNNLLAQMVLKHFNECNYIRSE--ANGPRYCPSLESKVIRFPHLN-HRIFLEP 314 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EGL++D++YP G+S E+Q + R IPGLE V I + GY IEYDY++PK+L TL+T Sbjct: 315 EGLDSDLIYPQGMSMTFAPEVQLEVYRCIPGLENVEISQAGYGIEYDYVDPKQLKLTLQT 374 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 K + GLFLAGQINGTTGYEEAAAQG+VAGIN+A S RT+ YIGV+IDDLTS Sbjct: 375 KAVEGLFLAGQINGTTGYEEAAAQGIVAGINAAASSQNKKPFVIDRTEGYIGVLIDDLTS 434 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL 477 G EPYRMFTSRAE R+ LRPDNAD RLT G + G + E R RF K + YN + L Sbjct: 435 LGTSEPYRMFTSRAELRLHLRPDNADMRLTKKGYEHGAVSEHRYNRFLKMLSAYNKAQDL 494 Query: 478 LKSLVLTSKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPD--ARKFSSLV 532 LKS + N I ++ K +A++ L + + P R + Sbjct: 495 LKS-IKYPMNFWKKLIPCLENARVTKVYSAFDLLCRYEVDFMEIQKAVPFELERLLENKE 553 Query: 533 IE-RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 IE RL+IE+ Y Y + + + + I+ E +IP +FDYS L +S E +EKL+ +P N Sbjct: 554 IEYRLKIEAXYYFYLDKSLAKIERIRKECDTIIPDNFDYSKLNNISEECREKLNFWRPQN 613 Query: 592 LLQASKIEGMTPAALNLLLIYIK 614 L AS++ G T AL LL ++K Sbjct: 614 LAAASRVPGATTEALMELLNFLK 636 >gi|288573675|ref|ZP_06392032.1| glucose inhibited division protein A [Dethiosulfovibrio peptidovorans DSM 11002] gi|288569416|gb|EFC90973.1| glucose inhibited division protein A [Dethiosulfovibrio peptidovorans DSM 11002] Length = 626 Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust. Identities = 255/613 (41%), Positives = 348/613 (56%), Gaps = 5/613 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M N+ YDVIV+G GHAGCEAA VAA++G T L+ I M CNP+IGG KGHLVR Sbjct: 1 MTNKVYDVIVVGAGHAGCEAALVAARMGHDTLLLNLYLDNIALMPCNPSIGGPAKGHLVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ-ENLDV 119 EI AL G R D + + R LN KGPAVR R Q D Y RE+L L++ Sbjct: 61 EISALGGEQARATDRSALMMRWLNTSKGPAVRALRAQCDLHDYHWHY-REVLEHCPGLEL 119 Query: 120 IQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 Q V G E + + + +V+LTTGT+L G +HIG + +G +G P+ Sbjct: 120 HQDTVVGLIVEGDRVKGVETLYGLSYHARSVILTTGTYLDGRVHIGNVNFSSGPLGQIPA 179 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIE 239 + L + +K F GRLKTGT R+ +I W + + Q +E R I Sbjct: 180 HGLGENLLKLGFRMGRLKTGTTPRVHSDSIDWSELQIQEGEEEPQSMDLWDKPEVYRHIT 239 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 CG+ +TNL+THRII EN+ S + SG I GPRYCPSIE K+++F +++ H +F EP Sbjct: 240 CGVGKTNLDTHRIITENLDRSPVSSGTITGTGPRYCPSIESKVMQFPDKDSHTVFFEPVA 299 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 + +Y ST+LP ++Q + RT+PG + I+R GYAIEYDY++P +L P LETK Sbjct: 300 RGSKEIYLQNFSTSLPYDVQIEMTRTLPGCREARIMRAGYAIEYDYMDPTQLTPWLETKA 359 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGT+GYEEAAAQGL+AGIN+ + + R ++YIGV+IDDL +KG Sbjct: 360 IKGLFCAGQINGTSGYEEAAAQGLMAGINAVLRLRGEPYLVLGRHEAYIGVLIDDLVTKG 419 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNF-LRSLL 478 EPYRM TSR E+R+ +R DNAD RL+ IG KLG + + R + + + + ++ L Sbjct: 420 TREPYRMLTSRCEHRLLMRHDNADRRLSGIGRKLGLLDDGRWEILVERWRNTDREIKRLG 479 Query: 479 KSLVLTSKNLSS--TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 + + S +++S SI ++ T E L P L P + R+ Sbjct: 480 STRIKPSDDVNSDLASIGEAPMDRSLTGAELLRRPGVDYDFLSRYIPSGEDLEGHIRRRV 539 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 ++E YA Y RQ K+ + E IP DFDY S+ L E EKL ++P L QA Sbjct: 540 EVEIKYAGYVARQERSVKKFERMEALTIPDDFDYRSMKGLLAESLEKLERIRPKTLGQAR 599 Query: 597 KIEGMTPAALNLL 609 +I G+TP L LL Sbjct: 600 RISGVTPTDLQLL 612 >gi|300362684|ref|ZP_07058860.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus gasseri JV-V03] gi|300353675|gb|EFJ69547.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus gasseri JV-V03] Length = 633 Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust. Identities = 259/618 (41%), Positives = 360/618 (58%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAG EAA AA++G T L+T + M CNP++GG KG +VREIDAL Sbjct: 11 YDVIVVGAGHAGVEAALAAARMGEKTLLLTINLDMVAFMPCNPSVGGPAKGTVVREIDAL 70 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ DA IQ R+LN KGPAVR R QAD+ Y M+ I ++ NL + Q Sbjct: 71 GGEMGKNIDATYIQMRMLNTGKGPAVRALRAQADKWQYHEHMKDTIENEPNLTLRQAVAD 130 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + ++ + +VVLTTGT RG I IG+L +G PS L + Sbjct: 131 ELIVENGVCKGLITNTGAKYHAKSVVLTTGTAARGKIIIGELTYSSGPNNSLPSIKLPEN 190 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 K F R KTGTP R+DG T+ + KT+++ D+ FS+ + Q+ C +T Sbjct: 191 LEKLGFKLRRFKTGTPPRVDGNTVDYSKTQEEPGDKEPRHFSYTSKDSDYLKDQMSCYMT 250 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II N+ + ++SG IK GPRYCPSIEDK+VRF +++ HQIFLEPEG NT Sbjct: 251 YTNTVTHDIIRANLDRAPMFSGVIKGVGPRYCPSIEDKVVRFADKDRHQIFLEPEGRNTK 310 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y ST++PEE+Q + + ++ GLEK ++RPGYAIEYD I P +L TLETK I L Sbjct: 311 EIYVGDFSTSMPEEVQLKMLHSVAGLEKAELMRPGYAIEYDVIEPWQLKHTLETKNIEHL 370 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ+NGT+GYEEAA QGL+AGIN+A + R ++YIGV+IDDL +KG EP Sbjct: 371 FTAGQMNGTSGYEEAAGQGLIAGINAALSAQNKPGFTLQRDEAYIGVLIDDLVTKGTNEP 430 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT G KLG I E R +F Q + + +K + + Sbjct: 431 YRLLTSRAEYRLLLRHDNADLRLTEKGHKLGLISEERYAKFEAKKQAISRAMAAIKKVTI 490 Query: 484 -TSKNLSSTSISFKQD--GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + + S KQD + +FL P + + + V E+++I Sbjct: 491 HPTDEVQEYLASVKQDRLNAGVSGADFLKRPRVTFDAVEKLSGQTLATDRYVKEQVEIAL 550 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y ++ + E + IP D DY+++P+L+ E ++K ++P ++ QA +I G Sbjct: 551 KYEGYIKKEKTLVDRLHRLESKKIPVDIDYNAIPSLATEARQKFEKIRPESIAQAERISG 610 Query: 601 MTPAALNLLLIYIKKNTV 618 + PA L +L YI++ + Sbjct: 611 VNPADLAILTAYIQQGRI 628 >gi|86144116|ref|ZP_01062453.1| glucose-inhibited division protein A [Leeuwenhoekiella blandensis MED217] gi|85829378|gb|EAQ47843.1| glucose-inhibited division protein A [Leeuwenhoekiella blandensis MED217] Length = 625 Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust. Identities = 270/625 (43%), Positives = 384/625 (61%), Gaps = 26/625 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAGCEAAA AA G+ T L+T TI MSCNPA+GG+ KG +VREIDAL Sbjct: 8 YDVIVVGGGHAGCEAAAAAANSGSKTLLVTMNLQTIAQMSCNPAMGGIAKGQIVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADR----ELYRLAMQREILSQENLDVIQ 121 G G V+D IQF++LN KGPA+ PR Q+DR E +RL ++ + NLD Q Sbjct: 68 GGYSGIVSDKTAIQFKMLNKSKGPAMWSPRVQSDRMRFAEEWRLMLE----NTANLDFYQ 123 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V G E + ++ + I+ +V+LT GTFL G+IHIG+ + GR G+ + Sbjct: 124 EMVNGLLVEGDRVAGVRTSLGIEIKSKSVILTNGTFLNGLIHIGEKQFGGGRAGERKATG 183 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQIEC 240 + + FD+GR+KTGTP R+DG+++ + K +Q DE FSF K +Q C Sbjct: 184 ITEQLVDLGFDSGRMKTGTPPRVDGRSLDFSKMIEQPGDEDPQKFSFSNATKPLTKQRSC 243 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 ++ T+ E H ++ E S +++G I+S GPRYCPSIEDKI RF +++ HQ+F+EPEG Sbjct: 244 QMSYTSPEVHNLLREGFDRSPMFNGRIQSTGPRYCPSIEDKINRFADKDRHQLFVEPEGW 303 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 NT Y NG ST+LPEE+Q + +R + G E V RPGYAIEYDY P +L TLETK + Sbjct: 304 NTIEYYVNGFSTSLPEEVQFKALRQVSGFENVKFFRPGYAIEYDYFPPTQLKHTLETKLV 363 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GL+ AGQINGTTGYEEAA+QGLVAG+N++ K + D R ++YIGV++DDL +KG Sbjct: 364 DGLYFAGQINGTTGYEEAASQGLVAGLNASLKVQEKDPFILKRDEAYIGVLVDDLITKGT 423 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIG-ERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR LR DNAD RLTP ++G ER Q K Q N L++ Sbjct: 424 KEPYRMFTSRAEYRTLLRQDNADARLTPRSFEVGLASKERMQALEKKEAQAVN----LVE 479 Query: 480 SLVLTSKNLSSTSISFKQDGKT-----RTAYEFLSYPDFSIQNLFSICPDARKF------ 528 TS + + G T + S P +++++ S D +++ Sbjct: 480 FFNTTSIQPEEANPVLAEKGTTPMKQSDKMVKIFSRPQIALEDMLSF-KDVKEYVAENNL 538 Query: 529 SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 + V+E+ +I Y+ Y ++ A +++ E IP +FDY+ L +LS E +EKL+ ++ Sbjct: 539 ETEVLEQAEIRIKYSGYIEKEKANADKLQRLENIKIPDNFDYTKLKSLSYEAREKLTKIQ 598 Query: 589 PFNLLQASKIEGMTPAALNLLLIYI 613 P + QAS++ G++P+ ++++L+Y+ Sbjct: 599 PTTISQASRVSGVSPSDISVMLVYM 623 >gi|325913679|ref|ZP_08176041.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus iners UPII 60-B] gi|325477038|gb|EGC80188.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus iners UPII 60-B] Length = 630 Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust. Identities = 262/619 (42%), Positives = 363/619 (58%), Gaps = 7/619 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAA AA++G T L+T + M CNP++GG KG +VRE+DAL Sbjct: 9 YDVIVVGAGHAGCEAALAAARMGEKTLLLTINLDMVAFMPCNPSVGGPAKGTVVREVDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ DA +Q R+LN KGPAVR R QAD+ Y M+ I + NL + QG Sbjct: 69 GGQMGKNIDATYVQMRMLNTGKGPAVRALRAQADKWKYHEYMKNTIENTPNLTLRQGMAD 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E+ I ++ + +VVLT GT RG I IG+L +G PS L + Sbjct: 129 ELIVEEGICKGLITNTGAKYLAKSVVLTPGTATRGRIIIGELTYSSGPNNSLPSIKLAEN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 K F R KTGTP R+DG TI + KTE++ D+ FS+ T D Q+ C +T Sbjct: 189 LEKLGFKMRRFKTGTPPRVDGNTIDYSKTEEEPGDKEPRHFSYTTSDDDYLKDQLSCYMT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II +N+ + ++SG IK GPRYCPSIE KIVRF +++ HQIFLEPEG T Sbjct: 249 YTNPVTHEIIRKNLDRAPMFSGVIKGVGPRYCPSIESKIVRFADKDRHQIFLEPEGWKTR 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y ST++PEE+Q + + ++ GLEK ++RPGYAIEYD I P +L TLETK I L Sbjct: 309 EIYVGDFSTSMPEEVQLKMLHSVVGLEKAEMMRPGYAIEYDVIEPWQLKHTLETKNIRHL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ+NGT+GYEEAA QGL+AGIN+A + R ++YIGV+IDDL +KG EP Sbjct: 369 FTAGQMNGTSGYEEAAGQGLIAGINAALSAQNKPGFVLGRDEAYIGVLIDDLVTKGTNEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT G LG I E R + F + + +KS+ + Sbjct: 429 YRLLTSRAEYRLLLRHDNADLRLTEKGYNLGLISEERYQEFLRKKEAIATTMKNIKSITI 488 Query: 484 -TSKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 ++ + + KQD G A +FL P + + + V E+++I Sbjct: 489 HPTEEVQNYLKDIKQDALNGAVNGA-DFLKRPHVTFDAIEKLTGKKLAADRYVKEQVEIA 547 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y ++ I + E + IP+ DY+++P+L+ E ++K ++P ++ QA +I Sbjct: 548 LKYEGYIKKEKIMVDRLHRLESKKIPEGIDYAAIPSLATEARQKFEKIRPESIAQAERIS 607 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA L +L YI++ + Sbjct: 608 GVNPADLAVLTAYIQQGRI 626 >gi|251772738|gb|EES53300.1| glucose inhibited division protein A [Leptospirillum ferrodiazotrophum] Length = 613 Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust. Identities = 274/617 (44%), Positives = 362/617 (58%), Gaps = 26/617 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DV+V+GGGHAG EAA +A+ G+ T L+T IG MSCNP++GG+GKGH+VREIDA+ Sbjct: 10 WDVVVVGGGHAGIEAAYASARQGSRTLLLTLHLDFIGQMSCNPSVGGIGKGHIVREIDAM 69 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG +AD + +Q RVLN +KG AV+ R Q DR YR +R + S L + QGEV Sbjct: 70 GGAMGSLADQSALQLRVLNTRKGAAVQAIRAQCDRHRYRTLARRLLDSHPLLFLRQGEVV 129 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + +SS+ + D S I +VLT+GTFL G +HIG GR G+ S SL Sbjct: 130 SLERSGDRLSSLALSDGSRIFFDALVLTSGTFLNGQLHIGLSSTSGGRGGERSSLSLSQF 189 Query: 186 FMK-FDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK-----ITNRQIE 239 + GRLKTGTP RL G+++ + + E Q DE L FS ++ + Sbjct: 190 LSEECGLSLGRLKTGTPPRLHGRSLDFSRMEPQPGDEPLPFFSQLSPPPEGLFFGGSSLP 249 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +T T ET II +N+ S +YSG I+ GPRYCPSIEDKIV+F + H IF+EPEG Sbjct: 250 CYLTHTTPETRDIIQKNLDRSPLYSGKIRGIGPRYCPSIEDKIVKFPDHLTHHIFIEPEG 309 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L+ D YPNGIST+LP ++Q Q + +IPGLE I+RPGYA+EYD++ P +L TL K Sbjct: 310 LDVDEFYPNGISTSLPVDVQEQILSSIPGLENAIILRPGYAVEYDFVFPDQLHHTLAVKS 369 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 LFLAGQINGTTGYEEAA QGLVAGIN+AR S L R SYIGVM+DDL + Sbjct: 370 TPNLFLAGQINGTTGYEEAAGQGLVAGINAARHSQGLSTWTPDRQSSYIGVMVDDLVTHS 429 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 + EPYRMFTSRAE R+ +R DNA R+TP + LG + ++ + F I+ N LR+LL Sbjct: 430 IDEPYRMFTSRAENRLYIRNDNAVERMTPQALALGLLSPQQIEAFNDRIEYQNSLRALLH 489 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLF-SICPDARKFSSLVIERLQI 538 S L K+L + L PD +++ L D L ++ L+ Sbjct: 490 SSRLEGKSL----------------HHRLRSPDVTLRQLLREQAIDFSAIPPLWLDALEQ 533 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E Y Y M + IP F +P LSNE++ +L +P L QA + Sbjct: 534 EIKYEGYVRISMDRWDRMA---DLPIPPSFFDRDIPGLSNEVRTRLRKSRPTTLHQALSL 590 Query: 599 EGMTPAALNLLLIYIKK 615 GMTP A++LL IY+ K Sbjct: 591 RGMTPGAIDLLRIYLTK 607 >gi|171920648|ref|ZP_02931885.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|195867356|ref|ZP_03079360.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|171903380|gb|EDT49669.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|195660832|gb|EDX54085.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ureaplasma urealyticum serovar 9 str. ATCC 33175] Length = 614 Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust. Identities = 249/614 (40%), Positives = 366/614 (59%), Gaps = 7/614 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIG GHAG EAA + L TALIT IG M CNP+IGG KG + REID Sbjct: 2 KKYDVIVIGAGHAGLEAAFATSNLNLQTALITLDEKGIGMMPCNPSIGGPAKGIVTREID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G+ G+ ADA +Q ++LN KGP V R Q D+ Y+ +++I Q+NLD+I E Sbjct: 62 ALGGIQGKAADATTMQMKILNSSKGPGVWAIRAQIDKIAYQRWFKQQIKQQKNLDLIIAE 121 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V+ E NI+ +++ D +I V++TTGT+L+ + H G + + G G + L Sbjct: 122 VSDLLVENNIVKGVILSDQKIIHADYVIITTGTYLKSITHRGSVCVDEGADGTKNAKFLS 181 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM--TDKITNRQIECG 241 NS K F+ RLKTGTPAR+ +I + + + I F+ T K Q+ C Sbjct: 182 NSLAKLGFELIRLKTGTPARIKKDSIDFTNMIVEPGTNQKIAFNHYHPTYKPYEEQVPCH 241 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 I TN TH+II EN+ SA+Y G I GPRYCPSIEDKIV+F E+ HQIF+EPE Sbjct: 242 IIYTNETTHQIIRENLDKSAMYGGMISGIGPRYCPSIEDKIVKFSEKPRHQIFVEPESYE 301 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 D +Y G ST++P ++Q + IR++PGLE I++ YAIEYD I+P +L+P+LE+K ++ Sbjct: 302 LDSMYLGGFSTSMPIDVQEKMIRSLPGLEDCEILKYAYAIEYDAIDPTQLYPSLESKLVN 361 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 LF AGQINGT+GYEEAAAQGL+A IN ++K + I R +YIGVMIDD+ +KGV+ Sbjct: 362 NLFFAGQINGTSGYEEAAAQGLMAAINVSQKHKNKEPIVLGRDQAYIGVMIDDIVTKGVV 421 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAE+R++LR DNAD+RL IG ++G + ++ +++ N + + LK+ Sbjct: 422 EPYRLLTSRAEHRLALRNDNADDRLMKIGFEIGLLKPEVYDQYLNNLKQINEVLNWLKTT 481 Query: 482 VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 + + + F ++L P+ + +L CP + +I ++QI+ Sbjct: 482 TVGQID----DLKFTTLKTNSYLIDYLKRPEVKLNDLLIYCP-IKIEDEQIINKVQIQVK 536 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 + Y Q K++K + DY +P +S E +KL+ +KP +L QAS+I G+ Sbjct: 537 FEGYIKNQEENLKKLKRLNNIKLHGIVDYKEVPNISLETIDKLNKIKPLDLEQASRISGV 596 Query: 602 TPAALNLLLIYIKK 615 + ++ Y+++ Sbjct: 597 NLTDIAMIKYYLER 610 >gi|309804868|ref|ZP_07698930.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus iners LactinV 09V1-c] gi|309809721|ref|ZP_07703575.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus iners SPIN 2503V10-D] gi|312871148|ref|ZP_07731246.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus iners LEAF 3008A-a] gi|312874789|ref|ZP_07734808.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus iners LEAF 2053A-b] gi|325912328|ref|ZP_08174725.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus iners UPII 143-D] gi|308165807|gb|EFO68028.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus iners LactinV 09V1-c] gi|308169900|gb|EFO71939.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus iners SPIN 2503V10-D] gi|311089534|gb|EFQ47959.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus iners LEAF 2053A-b] gi|311093162|gb|EFQ51508.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus iners LEAF 3008A-a] gi|325475987|gb|EGC79156.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus iners UPII 143-D] Length = 630 Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust. Identities = 262/619 (42%), Positives = 363/619 (58%), Gaps = 7/619 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAA AA++G T L+T + M CNP++GG KG +VRE+DAL Sbjct: 9 YDVIVVGAGHAGCEAALAAARMGEKTLLLTINLDMVAFMPCNPSVGGPAKGTVVREVDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ DA +Q R+LN KGPAVR R QAD+ Y M+ I + NL + QG Sbjct: 69 GGQMGKNIDATYVQMRMLNTGKGPAVRALRAQADKWKYHEYMKNTIENTPNLTLRQGMAD 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E+ I ++ + +VVLT GT RG I IG+L +G PS L + Sbjct: 129 ELIVEEGICKGLITNTGAKYLAKSVVLTPGTATRGRIIIGELTYSSGPNNSLPSIKLAEN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 K F R KTGTP R+DG TI + KTE++ D+ FS+ T D Q+ C +T Sbjct: 189 LEKLGFKMRRFKTGTPPRVDGNTIDYSKTEEEPGDKEPRHFSYTTSDDDYLKDQLSCYMT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II +N+ + ++SG IK GPRYCPSIE KIVRF +++ HQIFLEPEG T Sbjct: 249 YTNPVTHEIIRKNLDRAPMFSGVIKGVGPRYCPSIESKIVRFADKDRHQIFLEPEGWKTR 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y ST++PEE+Q + + ++ GLEK ++RPGYAIEYD I P +L TLETK I L Sbjct: 309 EIYVGDFSTSMPEEVQLKMLHSVVGLEKAEMMRPGYAIEYDVIEPWQLKHTLETKNIRHL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ+NGT+GYEEAA QGL+AGIN+A + R ++YIGV+IDDL +KG EP Sbjct: 369 FTAGQMNGTSGYEEAAGQGLIAGINAALSAQNKPGFVLGRDEAYIGVLIDDLVTKGTNEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT G LG I E R + F + + +KS+ + Sbjct: 429 YRLLTSRAEYRLLLRHDNADLRLTEKGYNLGLISEERYQEFLRKKEAIATTMKNIKSITI 488 Query: 484 -TSKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 ++ + + KQD G A +FL P + + + V E+++I Sbjct: 489 HPTEEVQNYLKDIKQDALNGAVNGA-DFLKRPRVTFDAIEKLTGKKLAADRYVKEQVEIA 547 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y ++ I + E + IP+ DY+++P+L+ E ++K ++P ++ QA +I Sbjct: 548 LKYEGYIKKEKIMVDRLHRLESKKIPEGIDYAAIPSLATEARQKFEKIRPESIAQAERIS 607 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA L +L YI++ + Sbjct: 608 GVNPADLAVLTAYIQQGRI 626 >gi|309775308|ref|ZP_07670317.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Erysipelotrichaceae bacterium 3_1_53] gi|308916971|gb|EFP62702.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Erysipelotrichaceae bacterium 3_1_53] Length = 618 Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust. Identities = 255/617 (41%), Positives = 378/617 (61%), Gaps = 11/617 (1%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALD 66 DVIVIGGGHAG EAA A+L +T L + I SM CNP++GG KG +VREIDAL Sbjct: 3 DVIVIGGGHAGVEAALACARLKKTTILYSMHIDMIASMPCNPSVGGPAKGIVVREIDALG 62 Query: 67 GLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAG 126 G MG+ ADA +QF++LN KGP V+ R Q+D+ Y+ MQ+++L Q +L+V + V Sbjct: 63 GEMGKAADATALQFKMLNTTKGPGVQCLRVQSDKLAYKQYMQQKVLQQPHLEVREMCVEQ 122 Query: 127 FNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSF 186 E ++ I +D ++ C +++TTGTF+ I +G +G + + +L S Sbjct: 123 VLAEDGRVTGIRQKDGVVVNCRALIVTTGTFMSSSILVGHTSTLSGPEDEPTTENLSQSL 182 Query: 187 MKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--NRQIECGITR 244 + T RLKTGTPAR+ +I + KT Q + I FS T +I ++Q C +T Sbjct: 183 RELGIQTFRLKTGTPARVLTSSIDFTKTAIQPGTDAFICFSQDTKEIRPFDKQAVCYLTY 242 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T +TH II N++ SA+YSG +K GPRYCPSIEDK+VRF ++ HQIFLEPE + D Sbjct: 243 TTAKTHDIINRNLERSAMYSGLVKGVGPRYCPSIEDKLVRFADKERHQIFLEPESESLDT 302 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 Y G ST++P ++Q + + ++PGLE I + YAIEYD I+P + PTLE K + L+ Sbjct: 303 TYVQGFSTSMPHDVQEEMLHSLPGLENCVIEKYAYAIEYDAIDPLQCKPTLENKLVENLY 362 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAAAQGL+AGIN+ RK ++ + + R ++YIGVMIDDL +KG EPY Sbjct: 363 TAGQINGTSGYEEAAAQGLIAGINAVRKLDQKEPLILHRDEAYIGVMIDDLVTKGTKEPY 422 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RL+ G +G + + R RF K +++ S L S+ T Sbjct: 423 RLLTSRAEYRLLLRHDNADARLSRYGHDIGLLSDERFARFEKKMKDIEETISYLDSVRFT 482 Query: 485 SKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 K+ L + S+ ++G +A E L P +I +L D R+ + + ++IE Sbjct: 483 PKSTVNELLQTLSLDVLKEGI--SAAELLKRPGVTI-DLLQPYLD-RRIDIAIAKLVEIE 538 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + +A+ ++ ++ +P+ FDY + LS E ++KL+ ++P + QAS+I Sbjct: 539 IRYEGYIKKAKRDAQHLRAMDQVRLPEHFDYDQVVNLSLEARQKLNKIQPLTMGQASRIS 598 Query: 600 GMTPAALNLLLIYIKKN 616 G+ PA + +L +++++ Sbjct: 599 GVNPADIAVLAVFMEQQ 615 >gi|323342281|ref|ZP_08082513.1| glucose inhibited division protein A [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463393|gb|EFY08587.1| glucose inhibited division protein A [Erysipelothrix rhusiopathiae ATCC 19414] Length = 616 Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust. Identities = 251/615 (40%), Positives = 370/615 (60%), Gaps = 9/615 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAG EAA +A++G TAL T I SM CNP+IGG KG +VREI+AL Sbjct: 2 YDVIVVGGGHAGVEAAVASARMGQRTALFTLNVDKIASMPCNPSIGGPAKGIVVREIEAL 61 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+MG++AD +QFR+LN KGP V+ R Q+D+ Y AM+ +L++ ++++Q V Sbjct: 62 GGVMGKIADKTALQFRILNSSKGPGVQCLRVQSDKLAYSRAMRDAVLAEPGIEIVQKMVE 121 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 G E +++ + + + + TV++T+GT++ I + +G GD +N+L S Sbjct: 122 GVVAENGVVTGVRCKGDEFVAAKTVIITSGTYMSSKILLSSTVTVSGPDGDPTTNNLSES 181 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 T RLKTGTPAR+ +I + KT Q D+ FS T D + Q C +T Sbjct: 182 LRALGLKTFRLKTGTPARVYTDSIDFSKTTIQPGDDEPYYFSNSTKKDDVIKEQYPCYLT 241 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH +I N++ S++YSG ++ G RYCPSIEDKIVRF ++N HQIFLEPE D Sbjct: 242 YTNPTTHDLIEANLEKSSMYSGVVEGVGARYCPSIEDKIVRFSDKNRHQIFLEPESAELD 301 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 Y G+S++LPE++Q IRT+PGLE + R GYAIEYD I+P +L P+LE + L Sbjct: 302 TTYVQGLSSSLPEDVQDAMIRTVPGLENCRVQRYGYAIEYDAIDPIQLKPSLEIMTVENL 361 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGT+GYEEAA QGL+AGIN+A K+ + + R ++YIGVM+DDL +KG LEP Sbjct: 362 FTAGQINGTSGYEEAAGQGLMAGINAALKNQGKEPLILKRDEAYIGVMLDDLVTKGTLEP 421 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNA RL+ G ++G + + ++ IQ + K++ L Sbjct: 422 YRLLTSRAEYRLLLRHDNAYRRLSHFGHEIGLLSDEDYEKIELDIQIIDEFIEASKTIKL 481 Query: 484 TSKNLSSTSISFKQ---DGKTRTAYEFLSYPDFSIQNLFSICP-DARKFSSLVIERLQIE 539 + K T Y+ + P + + + + RK + ++Q+E Sbjct: 482 PHNPEFEAYFAEKDSPFQAHDLTIYDAVKRPGIELLEVLELMDMEVRKDLAF---QIQVE 538 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + M EA++++ E +P+D +Y S+ LS E ++KL+ ++P + QAS+I Sbjct: 539 IKYEGYIKKAMKEAEKLRSMENIKLPEDINYDSIENLSIEGRQKLTAVRPITMGQASRIS 598 Query: 600 GMTPAALNLLLIYIK 614 G+ PA + +L + +K Sbjct: 599 GVNPADIAILAMVLK 613 >gi|307109991|gb|EFN58228.1| hypothetical protein CHLNCDRAFT_20360 [Chlorella variabilis] Length = 705 Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust. Identities = 269/636 (42%), Positives = 360/636 (56%), Gaps = 56/636 (8%) Query: 31 TALITHKTS-TIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGP 89 T L+T S +IG MSCNP+IGG+ KG LVRE+DALDGLM R ADAAGIQFR+LN KGP Sbjct: 41 TLLVTPSPSASIGEMSCNPSIGGVAKGTLVREVDALDGLMARAADAAGIQFRMLNASKGP 100 Query: 90 AVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIV--------MQD 141 AVRGPR Q DR LY+ A+QR + L + G V E + Sbjct: 101 AVRGPRAQMDRVLYKWAVQRMLGGVPGLAIHDGAVVDLLVEPRPSGGGPGPVVAGVVLAS 160 Query: 142 NSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGD------------------------- 176 I C +VV+TTGTFLRGVIH+G PAGR+ Sbjct: 161 GERILCRSVVVTTGTFLRGVIHVGSHSRPAGRIASLTSAREASRPEAAREAELTDEADVT 220 Query: 177 --SPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT 234 + L F F GRLKTGTP RLDG+TI W E+Q D PFSF+ + Sbjct: 221 AAGAATRLARRFADLGFALGRLKTGTPPRLDGRTIDWSVCEEQPGDGAPTPFSFLHLQQP 280 Query: 235 NR-----QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYG----PRYCPSIEDKIVRF 285 Q+ C TRT + ++++ + G + G PRYCPS+E K RF Sbjct: 281 GWSPPAGQVSCFGTRTTAASEALVLDCMASGERRDGMTVAQGGCVEPRYCPSLETKFRRF 340 Query: 286 GERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDY 345 R H ++LEPEGL TDVVYPNGIS ++ E Q + ++TIPGL ++ P YA+EYDY Sbjct: 341 PGRT-HHVWLEPEGLGTDVVYPNGISNSMEPEDQLRLLQTIPGLGAARMLAPAYAVEYDY 399 Query: 346 INPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTD 405 ++P+EL PTLET+++ GL+LAGQINGTTGYEEAAAQGLVAG N+A + D + SR D Sbjct: 400 VDPRELAPTLETRRLRGLYLAGQINGTTGYEEAAAQGLVAGANAAAPGGR-DPLLLSRAD 458 Query: 406 SYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFA 465 Y+GV++DDL +G EPYRM ++RAE+R+ LRPDNAD RLT G++LG +G R F Sbjct: 459 GYLGVLVDDLVGRGTSEPYRMLSARAEFRLRLRPDNADLRLTEAGLQLGLVGAERAASFQ 518 Query: 466 KYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI---- 521 + Q+ LL ++ L+S + + QDG +A + L+ P ++ L + Sbjct: 519 QRRQQVEDAEQLLDAIQLSSSAWARRGLHVSQDGDYISAAQMLTRPGITLSQLAAAAAAE 578 Query: 522 -CPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNEL 580 P ++ L S Y + E E++ +E LIP+ DYS+L LS E Sbjct: 579 QVPGWQQLQELAA---AAAVSAVPYLEKMEAEVAELRRDEALLIPEWLDYSAL-QLSAED 634 Query: 581 KEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKN 616 +EKL+ +P +L A +I G+TP+AL LLL +++K Sbjct: 635 REKLTAARPTSLAAAQRIPGVTPSALLLLLQHVRKR 670 >gi|320587853|gb|EFX00328.1| mitochondrial translation optimization protein [Grosmannia clavigera kw1407] Length = 1223 Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust. Identities = 257/618 (41%), Positives = 362/618 (58%), Gaps = 58/618 (9%) Query: 33 LITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVR 92 LIT K +G SCNP+ GG+GKG ++REIDALDGL+GRV D AG+QFRVLN KGPAV Sbjct: 601 LITPKLDNLGVCSCNPSFGGIGKGIILREIDALDGLVGRVVDQAGVQFRVLNRSKGPAVW 660 Query: 93 GPRTQADRELYRLAMQREILSQENLDVIQGEVA--------------------GFNTEK- 131 GPR Q DR LY+ M+ + NL +++G V+ G+ ++ Sbjct: 661 GPRAQIDRGLYKQHMREMLEGYPNLSILEGSVSDIVVAEARGDEWRMGGVEENGYEKQQA 720 Query: 132 -NIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFD 190 I+ + ++ ++R VV+TTGTFL G IHIG PAGRMG++P+ L S + Sbjct: 721 SRRITGVRLETGEVVRTGRVVITTGTFLGGEIHIGMETRPAGRMGEAPTYGLSRSLREAG 780 Query: 191 FDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM--TDKITNR---QIECGITRT 245 F GRLKTGTP RLD +TI + E Q DE +PFS+M T +++R Q+ C T T Sbjct: 781 FALGRLKTGTPPRLDRRTIDYGALEAQRGDEPAVPFSYMDSTVAVSSREGGQLLCHATYT 840 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N TH I+ N+ + +K GPRYCPS+E K+ RFG + H ++LEPEG +DVV Sbjct: 841 NAATHAIVRANLDKTVHIRESVK--GPRYCPSLESKVQRFGHKERHIVWLEPEGFGSDVV 898 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YPNG+S +P Q Q +RTI GLE+V +++PGY +EYDY++P+ L TLETK I+GL+L Sbjct: 899 YPNGLSMTVPATAQEQLLRTIGGLERVTMLQPGYGVEYDYVDPRGLRATLETKAIAGLYL 958 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAA QG+VAGIN+ R + L+ GV EPYR Sbjct: 959 AGQINGTTGYEEAAGQGVVAGINAGRAAQGLEA--------------------GVSEPYR 998 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFT+R+E+R+S R DNAD RLTP+G + G +G+ R RF + + LR +L++ V ++ Sbjct: 999 MFTTRSEFRLSARFDNADARLTPLGRRWGVVGDVRWARFERDRDQAAALRGVLQTTVRSA 1058 Query: 486 KNLSSTSISFKQDGKTRTAYEFLSYPDF-SIQNLF------SICPDARKFSSLVIERLQI 538 + + D + R + L I +L ++ DA FS+ + R+ I Sbjct: 1059 PAWRRLGFAVRDDSRMRDGLDMLRVGGVDGIDDLVARGGVDALLVDA--FSADIRRRVAI 1116 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E+ YA Y Q +E + ++ +P D DY+++ LS K L+ +P +L QA ++ Sbjct: 1117 EAMYAPYETIQSVERARVARDDALRLPTDLDYAAVVGLSLAEKAVLAATRPESLAQARRV 1176 Query: 599 EGMTPAALNLLLIYIKKN 616 EGMTP LL ++ + Sbjct: 1177 EGMTPVGCVRLLAHVHRT 1194 >gi|307069506|ref|YP_003877983.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG (gidA) [Candidatus Zinderia insecticola CARI] gi|306482766|gb|ADM89637.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG (gidA) [Candidatus Zinderia insecticola CARI] Length = 624 Score = 473 bits (1217), Expect = e-131, Method: Compositional matrix adjust. Identities = 273/626 (43%), Positives = 395/626 (63%), Gaps = 20/626 (3%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DVI+IGGGHAG EAA + + + + T LI++ IG +SCNP+IGG+GK HLV+EID Sbjct: 5 KKFDVIIIGGGHAGIEAANICSNMNSITLLISNNIELIGELSCNPSIGGIGKSHLVKEID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 +L G+MG +D + I F++LN KG AV+ R Q DR++Y+ ++ ++ +++NL + QG Sbjct: 65 SLGGIMGICSDESSINFQILNYSKGNAVKSTRVQLDRKIYKDSIINKLKNKKNLFLFQGI 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 + EKNI+ I ++N + +++TTGTF +IHIG +GR+G++ ++ LF Sbjct: 125 IDDIIIEKNIVLGIKTKNNFIFLSKCLIITTGTFFNPLIHIGNYSYISGRLGENLNSKLF 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 KF F LKTGTP RLDGK+I + K +KQF + + FS ++D KI +QI C I Sbjct: 185 EKLKKFGFQYSTLKTGTPPRLDGKSINFLKLKKQFLNSNIQYFSILSDNKIKKKQINCWI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN T+ II +NI S++++G+I S GPRYCPSIEDKI +FG++ H+IFLEPEGLN+ Sbjct: 245 TNTNFYTYYIIKKNIYQSSLFNGNINSIGPRYCPSIEDKINKFGKK-KHKIFLEPEGLNS 303 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + YPNGIS +LP EIQ + +RT+ GLE VNI RPGY+IEY+Y L +LE+K IS Sbjct: 304 NEFYPNGISNSLPIEIQIKILRTLNGLENVNITRPGYSIEYNYFIGNHLKHSLESKIISN 363 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAA+QG++AGIN++ KSN R +YIGV+IDDL K + E Sbjct: 364 LFFAGQINGTTGYEEAASQGIIAGINASLKSNNKKKWYPKRYQAYIGVLIDDLIKKKINE 423 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYR+FT+ +EY+++LR DN RLT IG KL C+ ++ F K + + LLK+ + Sbjct: 424 PYRIFTTSSEYKLNLREDNVYLRLTEIGRKLKCVKNKQWFLFKKKKKIFKKKIRLLKTNL 483 Query: 483 LTSKNLSSTSISFKQDG-KTRTAYEFLSYPDFSIQNLFSICPDA------------RKFS 529 LT N+ ++ I+F + K + Y F F I N F + D + F Sbjct: 484 LTFNNIKNSKINFLFNNIKKKNIYSF-----FEIINKFKLNYDNFFNIFTNNNFKYKIFE 538 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 + + E+++ Y Y +Q+ +I + I K+ +Y+ + +LS E K K +ILKP Sbjct: 539 NDIKEQIENFCKYYGYYNKQLKNILKINKNKNYKINKNLNYNFIKSLSKEAKIKFNILKP 598 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKK 615 NL +A I G+ + L YIKK Sbjct: 599 NNLKEALSISGIDFNDILNLFFYIKK 624 >gi|309805920|ref|ZP_07699952.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus iners LactinV 03V1-b] gi|312873295|ref|ZP_07733350.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus iners LEAF 2052A-d] gi|308167696|gb|EFO69843.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus iners LactinV 03V1-b] gi|311091175|gb|EFQ49564.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus iners LEAF 2052A-d] Length = 630 Score = 473 bits (1217), Expect = e-131, Method: Compositional matrix adjust. Identities = 262/619 (42%), Positives = 362/619 (58%), Gaps = 7/619 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAA AA++G T L+T + M CNP++GG KG +VRE+DAL Sbjct: 9 YDVIVVGAGHAGCEAALAAARMGEKTLLLTINLDMVAFMPCNPSVGGPAKGTVVREVDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ DA +Q R+LN KGPAVR R QAD+ Y M+ I + NL + QG Sbjct: 69 GGQMGKNIDATYVQMRMLNTGKGPAVRALRAQADKWKYHEYMKNTIENTPNLTLRQGMAD 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E+ I ++ + +VVLT GT RG I IG+L +G PS L + Sbjct: 129 ELIVEEGICKGLITNTGAKYLAKSVVLTPGTATRGRIIIGELTYSSGPNNSLPSIKLAEN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 K F R KTGTP R+DG TI + KTE++ D+ FS+ T D Q+ C +T Sbjct: 189 LEKLGFKMRRFKTGTPPRVDGNTIDYSKTEEEPGDKEPRHFSYTTSDDDYLKDQLSCYMT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II +N+ + ++SG IK GPRYCPSIE KIVRF +++ HQIFLEPEG T Sbjct: 249 YTNPVTHEIIRKNLDRAPMFSGVIKGVGPRYCPSIESKIVRFADKDRHQIFLEPEGWKTR 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y ST++PEE+Q + + ++ GLEK ++RPGYAIEYD I P +L TLETK I L Sbjct: 309 EIYVGDFSTSMPEEVQLKMLHSVAGLEKAEMMRPGYAIEYDVIEPWQLKHTLETKNIRHL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ+NGT+GYEEAA QGL+AGIN+A + R ++YIGV+IDDL +KG EP Sbjct: 369 FTAGQMNGTSGYEEAAGQGLIAGINAALSAQNKPEFVLGRDEAYIGVLIDDLVTKGTNEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT G LG I E R + F + +KS+ + Sbjct: 429 YRLLTSRAEYRLLLRHDNADLRLTEKGYNLGLISEERYQEFLHKKEAITTTMKNIKSITI 488 Query: 484 -TSKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 ++ + + KQD G A +FL P + + + V E+++I Sbjct: 489 HPTEEVQNYLKDIKQDALNGAVNGA-DFLKRPRVTFDAIEKLTGKNLAADRYVKEQVEIA 547 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y ++ I + E + IP+ DY+++P+L+ E ++K ++P ++ QA +I Sbjct: 548 LKYEGYIKKEKIMVDRLHRLESKKIPEGIDYAAIPSLATEARQKFEKIRPESIAQAERIS 607 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA L +L YI++ + Sbjct: 608 GVNPADLAVLTAYIQQGRI 626 >gi|294055630|ref|YP_003549288.1| glucose-inhibited division protein A [Coraliomargarita akajimensis DSM 45221] gi|293614963|gb|ADE55118.1| glucose-inhibited division protein A [Coraliomargarita akajimensis DSM 45221] Length = 638 Score = 473 bits (1217), Expect = e-131, Method: Compositional matrix adjust. Identities = 260/647 (40%), Positives = 377/647 (58%), Gaps = 60/647 (9%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 N+ YDVI+ G GHAGCEAA AA++GAST ++T TI MSCNPAIGG KGH+VREI Sbjct: 10 NQPYDVIICGAGHAGCEAALAAARMGASTLMLTGNLDTIAQMSCNPAIGGQAKGHIVREI 69 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G M D IQFR+LN KGPAV+ PR Q D++ Y+ M+ I Q NLD+ Q Sbjct: 70 DALGGEMAVNTDTTAIQFRLLNATKGPAVQAPRAQCDKKAYQYRMKHVIELQPNLDLFQA 129 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 V G + + + TVV+TTGTFLRG++H+G+ GRMGD + L Sbjct: 130 TVEGLIYRSGRVVGVRTNLDVEFYGHTVVVTTGTFLRGLMHVGQNMNEGGRMGDFSAKGL 189 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQ----------FADERLIPFSFMTDK 232 SF++ + RLKTGTPAR+ G +I ++ E+Q F D R + F + Sbjct: 190 SGSFLEAGIELERLKTGTPARILGSSINFEGLEEQEGDALPTLFAFYDTRGVDDVFHVEH 249 Query: 233 ITNR----------------------QIECGITRTNLETHRIIMENIKHSAIYSGDIKSY 270 ++ Q+ C +T T+ ET ++ EN+ SA+YSG+I+ Sbjct: 250 SSDAERALFHVEHSGQRKLGWAPGTDQVSCYMTYTSAETQSVVHENLHRSAMYSGEIEGT 309 Query: 271 GPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLE 330 GPRYCPSIEDK VRF +++ H +FLEPEG NT+ Y NG+ST+LP ++Q +R++ GLE Sbjct: 310 GPRYCPSIEDKFVRFKDKDRHMLFLEPEGRNTNEWYINGLSTSLPFDVQLAMLRSVQGLE 369 Query: 331 KVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSA 390 KV+++RP YA+EYD+ P +L+P+LE+K++ LF AGQINGT+GYEEAA QGLVAG+N+ Sbjct: 370 KVHMLRPAYAVEYDFAPPTQLYPSLESKQVENLFFAGQINGTSGYEEAAGQGLVAGVNAV 429 Query: 391 RKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIG 450 +K L+ + R + Y+GV+IDDL +KG EPYRMF+SRAE+R+ +A+ RL Sbjct: 430 QKLRGLEPMVLKRHECYLGVLIDDLVTKGTKEPYRMFSSRAEHRLLFNHPSAELRLKHHS 489 Query: 451 MKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDG----KTRTAYE 506 +G + R +R + +RS + L S + + G +TR+ + Sbjct: 490 SAMGLVDPERMQRIEA---KDRAIRSWVD-------RLESERVGGQLYGDIVRRTRSVSD 539 Query: 507 FLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPK 566 F PD D + V + + ++ Y R+ + ++++ +K LIP Sbjct: 540 F---PD-----------DLKALPREVKDEVMYRVAFRGYLEREAKQIEKMRHIDKILIPT 585 Query: 567 DFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYI 613 DFD+ + L NE EKL+ + P L QA +I G+ PA +++L++Y+ Sbjct: 586 DFDFRKVRGLRNESAEKLAAISPRTLGQAGRISGVNPADISILMVYL 632 >gi|312872751|ref|ZP_07732816.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus iners LEAF 2062A-h1] gi|311091793|gb|EFQ50172.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus iners LEAF 2062A-h1] Length = 630 Score = 473 bits (1216), Expect = e-131, Method: Compositional matrix adjust. Identities = 262/619 (42%), Positives = 362/619 (58%), Gaps = 7/619 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAA AA++G T L+T + M CNP++GG KG +VRE+DAL Sbjct: 9 YDVIVVGAGHAGCEAALAAARMGEKTLLLTINLDMVAFMPCNPSVGGPAKGTVVREVDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ DA +Q R+LN KGPAVR R QAD+ Y M+ I + NL + QG Sbjct: 69 GGQMGKNIDATYVQMRMLNTGKGPAVRALRAQADKWKYHEYMKNTIENTPNLTLRQGMAD 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E+ I ++ + +VVLT GT RG I IG+L +G PS L + Sbjct: 129 ELIVEEGICKGLITNTGAKYLAKSVVLTPGTATRGRIIIGELTYSSGPNNSLPSIKLAEN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 K F R KTGTP R+DG TI + KTE++ D+ FS+ T D Q+ C +T Sbjct: 189 LEKLGFKMRRFKTGTPPRVDGNTIDYSKTEEEPGDKEPRHFSYTTSDDDYLKDQLSCYMT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II +N+ + ++SG IK GPRYCPSIE KIVRF +++ HQIFLEPEG T Sbjct: 249 YTNPVTHEIIRKNLDRAPMFSGVIKGVGPRYCPSIESKIVRFADKDRHQIFLEPEGWKTR 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y ST++PEE+Q + + ++ GLEK ++RPGYAIEYD I P +L TLETK I L Sbjct: 309 EIYVGDFSTSMPEEVQLKMLHSVAGLEKAEMMRPGYAIEYDVIEPWQLKHTLETKNIRHL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ+NGT+GYEEAA QGL+AGIN+A + R ++YIGV+IDDL +KG EP Sbjct: 369 FTAGQMNGTSGYEEAAGQGLIAGINAALSAQNKPEFVLDRDEAYIGVLIDDLVTKGTNEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT G LG I E R + F + +KS+ + Sbjct: 429 YRLLTSRAEYRLLLRHDNADLRLTEKGYNLGLISEERYQEFLHKKEAIATTMKNIKSITI 488 Query: 484 -TSKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 ++ + + KQD G A +FL P + + + V E+++I Sbjct: 489 HPTEEVQNYLKDIKQDALNGAVNGA-DFLKRPRVTFDAIEKLTGKNLAADRYVKEQVEIA 547 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y ++ I + E + IP+ DY+++P+L+ E ++K ++P ++ QA +I Sbjct: 548 LKYEGYIKKEKIMVDRLHRLESKKIPEGIDYAAIPSLATEARQKFEKIRPESIAQAERIS 607 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA L +L YI++ + Sbjct: 608 GVNPADLAVLTAYIQQGRI 626 >gi|309807861|ref|ZP_07701793.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus iners LactinV 01V1-a] gi|329919809|ref|ZP_08276760.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus iners SPIN 1401G] gi|308168963|gb|EFO71049.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus iners LactinV 01V1-a] gi|328937156|gb|EGG33584.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus iners SPIN 1401G] Length = 630 Score = 473 bits (1216), Expect = e-131, Method: Compositional matrix adjust. Identities = 264/629 (41%), Positives = 363/629 (57%), Gaps = 27/629 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAA AA++G T L+T + M CNP++GG KG +VRE+DAL Sbjct: 9 YDVIVVGAGHAGCEAALAAARMGEKTLLLTINLDMVAFMPCNPSVGGPAKGTVVREVDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ DA +Q R+LN KGPAVR R QAD+ Y M+ I + NL + QG Sbjct: 69 GGQMGKNIDATYVQMRMLNTGKGPAVRALRAQADKWKYHEYMKNTIENTPNLTLRQGMAD 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E+ I ++ + +VVLT GT RG I IG+L +G PS L + Sbjct: 129 ELIVEEGICKGLITNTGAKYLAKSVVLTPGTATRGRIIIGELTYSSGPNNSLPSIKLAEN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 K F R KTGTP R+DG TI + KTE++ D+ FS+ T D Q+ C +T Sbjct: 189 LEKLGFKMRRFKTGTPPRVDGNTIDYSKTEEEPGDKEPRHFSYTTSDDDYLKDQLSCYMT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II +N+ + ++SG IK GPRYCPSIE KIVRF +++ HQIFLEPEG T Sbjct: 249 YTNPVTHEIIRKNLDRAPMFSGVIKGVGPRYCPSIESKIVRFADKDRHQIFLEPEGWKTR 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y ST++PEE+Q + + ++ GLEK ++RPGYAIEYD I P +L TLETK I L Sbjct: 309 EIYVGDFSTSMPEEVQLKMLHSVVGLEKAEMMRPGYAIEYDVIEPWQLKHTLETKNIRHL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ+NGT+GYEEAA QGL+AGIN+A + R ++YIGV+IDDL +KG EP Sbjct: 369 FTAGQMNGTSGYEEAAGQGLIAGINAALSAQNKPGFVLGRDEAYIGVLIDDLVTKGTNEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT G LG I E R + F + ++ + Sbjct: 429 YRLLTSRAEYRLLLRHDNADLRLTEKGHNLGLISEERYQEFLHKKE----------AIAM 478 Query: 484 TSKNLSSTSI-----------SFKQD---GKTRTAYEFLSYPDFSIQNLFSICPDARKFS 529 T KN+ + +I KQD G A +FL P + + + Sbjct: 479 TMKNIKAITIHPTEEVQNYLKDIKQDALNGAVNGA-DFLKRPRVTFDAIEKLTGKKLAAD 537 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 V E+++I Y Y ++ I + E + IP+ DY+++P+L+ E ++K ++P Sbjct: 538 RYVKEQVEIALKYEGYIKKEKIMVDRLHRLESKKIPEGIDYAAIPSLATEARQKFEKIRP 597 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKKNTV 618 ++ QA +I G+ PA L +L YI++ + Sbjct: 598 ESIAQAERISGVNPADLAVLTAYIQQGRI 626 >gi|170288483|ref|YP_001738721.1| glucose inhibited division protein A [Thermotoga sp. RQ2] gi|205831569|sp|B1L9P0|MNMG_THESQ RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|170175986|gb|ACB09038.1| glucose inhibited division protein A [Thermotoga sp. RQ2] Length = 626 Score = 473 bits (1216), Expect = e-131, Method: Compositional matrix adjust. Identities = 260/621 (41%), Positives = 378/621 (60%), Gaps = 11/621 (1%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 +R YDVIV+G GHAG EAA AA++G ++T T+G CNPAIGG KG +VREI Sbjct: 6 DRVYDVIVVGAGHAGIEAALAAARMGFRVLVLTVNPDTVGWAPCNPAIGGPAKGVVVREI 65 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G M + D I R+LNV KGPAVR R Q D+ Y M+R++ + N+ + G Sbjct: 66 DALGGEMAKTTDETMINVRMLNVSKGPAVRALRAQIDKISYSRTMKRKLETNPNIVLRHG 125 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRC--STVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 V TEK + +V DN I V++TTGTFLRG I IG+ PAGRMG+ P+ Sbjct: 126 IVERILTEKGRVKGVV--DNYGIDYLGKAVIVTTGTFLRGKIFIGRSTFPAGRMGEFPAT 183 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIE 239 L S ++ F+ GR KTGTPAR+ ++I + E+Q + + FSF + ++ + Sbjct: 184 KLTESLIELGFEVGRFKTGTPARVLKRSINFSVMERQDTSDEPLAFSFFDEPRVLPKDYP 243 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGD--IKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 C +TRTN ETH II + ++ S +Y I+ GPRYCPSIEDK+V+F ++ HQ+F+EP Sbjct: 244 CWLTRTNPETHSIIKQYLEFSPLYGTVKLIEGIGPRYCPSIEDKVVKFKDKESHQVFVEP 303 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EG +T+ Y NG+ST+LP E Q + IR++ GLE + RP YAIEYDYI+P++L+PTLE+ Sbjct: 304 EGRDTEEYYLNGLSTSLPYEAQIKMIRSVKGLENAIVTRPAYAIEYDYIDPRQLYPTLES 363 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 K + L+ AGQ+NGT+GYEEAA QG++AGIN+A K + R+++YIGV+IDDL + Sbjct: 364 KLVENLYFAGQVNGTSGYEEAAGQGIIAGINAALKLRGEPPLILKRSEAYIGVLIDDLVT 423 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL 477 KGV EPYR+ TSRAEYR+ LR DNA RL G ++G I + ++ + N Sbjct: 424 KGVDEPYRLLTSRAEYRLLLRHDNAHLRLAKYGYRVGLIPKWFYEKVLSLERRINEEIER 483 Query: 478 LKSLVLTSKNLSS---TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIE 534 LK +++ + + TS+ ++ + Y+ L P S L + P+ V+E Sbjct: 484 LKKVIVKPSDRVNDLLTSLGTSPLKESVSLYQLLKRPQLSYSALKFLDPNPID-DPEVVE 542 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I Y Y + E + E IP D DY ++P LS E ++KL ++P ++ Q Sbjct: 543 QVEINVKYEGYIQKMFEEVAVFEKYENYEIPHDLDYDAVPNLSTEARDKLKKIRPRSIGQ 602 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 A +I G+ P+ ++ L+IY+ + Sbjct: 603 AMRIPGINPSDISNLIIYLDR 623 >gi|13357595|ref|NP_077869.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|170762033|ref|YP_001752118.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|13626942|sp|Q9PRA6|MNMG_UREPA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|189039365|sp|B1AI24|MNMG_UREP2 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|11277859|pir||D82942 glucose inhibited division protein UU039 [imported] - Ureaplasma urealyticum gi|6898986|gb|AAF30444.1|AE002103_9 glucose inhibited division protein [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|168827610|gb|ACA32872.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ureaplasma parvum serovar 3 str. ATCC 27815] Length = 614 Score = 472 bits (1215), Expect = e-131, Method: Compositional matrix adjust. Identities = 248/614 (40%), Positives = 368/614 (59%), Gaps = 7/614 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIG GHAG EAA + L TALIT IG M CNP+IGG KG + REID Sbjct: 2 KKYDVIVIGAGHAGLEAAFATSNLNLQTALITLDEKGIGMMPCNPSIGGPAKGIVTREID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G+ G+ ADA +Q ++LN KGP V R Q D+ Y+ +++I Q+NLD+I E Sbjct: 62 ALGGIQGKAADATTMQMKILNSSKGPGVWAIRAQIDKIAYQRWFKQQIKQQKNLDLIIAE 121 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V+ E NI+ +V+ D +I+ V++TTGT+L+ + H G + + G G + L Sbjct: 122 VSDLLVENNIVKGVVLSDQKIIQADYVIITTGTYLKSITHRGSVCVDEGADGTKNAKFLS 181 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KITNRQIECG 241 ++ +K F+ RLKTGTPAR+ +I + + + I FS K + Q+ C Sbjct: 182 DALVKLGFELIRLKTGTPARIKKDSIDFTNMILEPGTNQKIAFSHYHPVYKPYDEQLPCH 241 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 I TN +TH+II EN+ SA+Y G I GPRYCPSIEDKIV+F E+ HQIF+EPE Sbjct: 242 IIYTNEQTHQIIRENLNKSAMYGGMISGIGPRYCPSIEDKIVKFSEKPRHQIFVEPESYE 301 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 D +Y G ST++P ++Q + IR++PGLE I++ YAIEYD I+P +L+P+LE+K ++ Sbjct: 302 LDSMYLGGFSTSMPIDVQEKMIRSLPGLENCEILKYAYAIEYDAIDPTQLYPSLESKLVN 361 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 LF AGQINGT+GYEEAAAQGL+A IN +K + + R +YIGVMIDD+ +KGV+ Sbjct: 362 NLFFAGQINGTSGYEEAAAQGLMAAINVNQKYQNKEPVILGRDQAYIGVMIDDIVTKGVV 421 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAE+R++LR DNAD+RL IG ++G + + + + +Y+ ++ +L L Sbjct: 422 EPYRLLTSRAEHRLALRNDNADDRLMKIGFEIGLL---KPEVYDQYLNNLKQIKEILNWL 478 Query: 482 VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 T+ + F ++L P+ + +L CP + +I ++QI+ Sbjct: 479 KTTTVG-QIDDLKFTTLKTNSYLIDYLKRPEIKLNDLLIYCP-IKIEDEQIINKVQIQVK 536 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 + Y Q K++K + DY +P +S E +KL+ +KP +L QAS+I G+ Sbjct: 537 FEGYIKNQEENLKQLKRLNNIKLHAIVDYKEVPNISLETIDKLNKIKPLDLEQASRISGV 596 Query: 602 TPAALNLLLIYIKK 615 + ++ Y+++ Sbjct: 597 NLTDIAMIKYYLER 610 >gi|325268313|ref|ZP_08134946.1| glucose inhibited division protein A [Prevotella multiformis DSM 16608] gi|324989455|gb|EGC21405.1| glucose inhibited division protein A [Prevotella multiformis DSM 16608] Length = 623 Score = 472 bits (1215), Expect = e-131, Method: Compositional matrix adjust. Identities = 256/622 (41%), Positives = 365/622 (58%), Gaps = 15/622 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+VIGGGHAGCEAA AA +GA T L+T + IG MSCNPA+GG+ KG +VREIDAL Sbjct: 5 YDVLVIGGGHAGCEAATAAANMGADTCLVTMDMNKIGQMSCNPAVGGIAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG V DA IQFR+LN KGPAV PR Q DR + ++ + ++LD+ Q + Sbjct: 65 GGYMGLVTDATAIQFRMLNRSKGPAVWSPRAQCDRGKFIWEWRKRLDHTDHLDIFQDQAD 124 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 TE + I + TV++T GTFL G++HIG+ K+ GR + + S Sbjct: 125 ELLTENGKVLGIRTIWGICLYAQTVIVTAGTFLNGLMHIGRRKVEGGRCAEPAVHHFTES 184 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + + R+KTGTP R+D +++ +D+ E Q + FSF Q+ C T Sbjct: 185 ITRHGIRSERMKTGTPVRIDRRSVHFDEMESQPGETDYHQFSFFGPHRQLPQLPCWTCNT 244 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N + H ++ + S +++G I+S GPRYCPSIE K+V F +++ H +FLEPEG +T+ + Sbjct: 245 NEQVHEVLRSGLADSPLFNGQIQSTGPRYCPSIETKLVTFPDKHSHPLFLEPEGTDTNEM 304 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG S+++P EIQ + I IP L I RPGYAIEYDY +P +L +LE+K I GLF Sbjct: 305 YLNGFSSSMPWEIQLEAIHRIPALRNAKIYRPGYAIEYDYFDPTQLKHSLESKIIDGLFF 364 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ+NGTTGYEEA QG VAGIN+A +R +SYIGV+IDDLT+KGV EPYR Sbjct: 365 AGQVNGTTGYEEAGGQGTVAGINAALLCAGKAPFVMNRDESYIGVLIDDLTTKGVDEPYR 424 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAEYRI LR D+AD RLT +LG R+ R+ ++Q+ + + TS Sbjct: 425 MFTSRAEYRILLRQDDADARLTEQAYRLGIA---RRDRYEWWLQKKEHISRITDFCNNTS 481 Query: 486 KNLSSTSISFKQDGKTRTA-----YEFLSYPDFSIQNLFSICPDARKF-------SSLVI 533 + +Q G + + ++ P + +NL ++ P ++ + Sbjct: 482 VKPDVVNGLLEQLGTSPIKGAARITDLVARPQVNFENLSAVVPALKEAIEASPNRQEEIA 541 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E +I+ Y Y R+ + A+++ E I FDY L LS E ++KL ++P L Sbjct: 542 EAAEIKLKYKGYIDRERVFAEKMHRLEDIKIKGYFDYGRLHDLSTECRQKLERIQPETLA 601 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I G++P+ +N+LL+ + + Sbjct: 602 QASRIPGVSPSDINVLLVLMGR 623 >gi|313887477|ref|ZP_07821166.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Porphyromonas asaccharolytica PR426713P-I] gi|312923119|gb|EFR33939.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Porphyromonas asaccharolytica PR426713P-I] Length = 638 Score = 472 bits (1215), Expect = e-131, Method: Compositional matrix adjust. Identities = 261/625 (41%), Positives = 371/625 (59%), Gaps = 19/625 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D+IVIG GHAGCEAA A++GAST LIT + + +SCNPA+GG+ KG +VREIDAL Sbjct: 18 FDIIVIGAGHAGCEAACATARMGASTLLITGDMNKVAQLSCNPAMGGIAKGQIVREIDAL 77 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADR----ELYRLAMQREILSQENLDVIQ 121 G G+++DAA IQ+R+LN KGPA+ PR Q DR EL+R + R D + Sbjct: 78 GGYTGQMSDAATIQWRMLNRSKGPAMWSPRAQLDRMRFMELWRGQLDRTDRLALWQDFVV 137 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G K+++ V Q + V+LT GTFL G++H GK IP GR+ + S+ Sbjct: 138 DIKFGAEDSKHLV---VTQLGMTFTAAKVILTAGTFLGGLMHFGKTMIPGGRISEPASHG 194 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIEC 240 + + R+KTGTPA +DG+++ W E+Q DE FSF+ + + RQ C Sbjct: 195 ITECLVAAGHHADRMKTGTPACIDGRSVDWSLVEEQPGDEEAGRFSFLPMQRSQLRQRSC 254 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 I TN H I+ ++ S +Y+G I+S GPRYCPSIE KIV F +R HQ+FLEPEG Sbjct: 255 YILYTNEACHDILRASLSDSPLYNGQIQSIGPRYCPSIETKIVNFADRTRHQLFLEPEGE 314 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T+ Y NG S++LP + Q + ++TIP L V + RPGYAIEYD+ +P++L TLE+K + Sbjct: 315 ETNEYYLNGFSSSLPIDTQIRALQTIPALRDVQLYRPGYAIEYDFFDPRDLHHTLESKLV 374 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GL+LAGQ+NGTTGYEEAA QGL+AGIN+A K + R ++YIGV+IDDL +KGV Sbjct: 375 PGLYLAGQVNGTTGYEEAAGQGLLAGINAALALQKKAPLVLRRDEAYIGVLIDDLVTKGV 434 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYRI LR DNAD RLTP +LG R R + + L +L + Sbjct: 435 DEPYRMFTSRAEYRILLRQDNADLRLTPYAEQLGLATAERLSRLEQIKEGIAALDNLCAN 494 Query: 481 LVLTSKNLSSTSISFKQ---DGKTRTAYEFLSYPDFSIQNLFSICPD-ARKFSSL----- 531 + + ++ +S + D T+ L P S+ L + A + + L Sbjct: 495 YSVKPEEVNGYLVSLGEKPLDFGTKLT-TLLLRPHVSLSGLIAQLDGFATQVAGLIGDDE 553 Query: 532 -VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 ++ R + Y Y R+ A+++ E + DY + AL E +EKLS ++P Sbjct: 554 EILTRTETAIKYRGYIEREEQAAQKLHRLESLTLGDKLDYQQISALPIEAREKLSRIRPA 613 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 + QA++I G++P+ +N+LL+ + + Sbjct: 614 TIAQAARIPGISPSDINILLVLLGR 638 >gi|288800538|ref|ZP_06405996.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prevotella sp. oral taxon 299 str. F0039] gi|288332751|gb|EFC71231.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prevotella sp. oral taxon 299 str. F0039] Length = 624 Score = 472 bits (1214), Expect = e-131, Method: Compositional matrix adjust. Identities = 260/627 (41%), Positives = 365/627 (58%), Gaps = 16/627 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +N YDVIV+GGGHAG EAA A+ +GA T LIT + IG MSCNPAIGG+ KG +VRE Sbjct: 1 MNFKYDVIVVGGGHAGNEAATAASNMGAKTCLITIDMNKIGQMSCNPAIGGIAKGQIVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G MG + DA IQFR+LN KGPAV PR Q DRE + + + ENLD+ Q Sbjct: 61 IDALGGQMGLITDATAIQFRMLNRGKGPAVWSPRAQCDREKFITKWKETLDKTENLDIWQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 +V + N I + V++T GTFL G++HIG+ P GR + Sbjct: 121 DQVDELIVKNNEIVGVKTVWGVEFTAKCVIITAGTFLNGLMHIGRRTFPGGRCAEPAVPH 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L + R+KTGTP R+D +++ +D+ E Q D FS+M +Q+ C Sbjct: 181 LTECINHLGIRSDRMKTGTPVRIDKRSVHFDEMEIQDGDFDFHQFSYMNLHKPLKQLPCW 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 T E H + + I S +++G I+S GPRYCPSIE K+V F +++ H +FLEPEG + Sbjct: 241 TFYTTPEAHMELNKGIADSPLFNGQIQSTGPRYCPSIETKLVTFPDKDKHPLFLEPEGTD 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ +Y NG S+++P E+Q + IP L I RPGYAIEYDY +P +L TLE+K + Sbjct: 301 TNEMYLNGFSSSMPFEVQLNALHKIPALRDAKIYRPGYAIEYDYFDPTQLKHTLESKVVK 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDC-ICFSRTDSYIGVMIDDLTSKGV 420 GL+ AGQ+NGTTGYEEAA QGLVAGIN+A + D R +SYIGV+IDDLT+KGV Sbjct: 361 GLYFAGQVNGTTGYEEAAGQGLVAGINAALRCFYNDKEFIMKRDESYIGVLIDDLTTKGV 420 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYRI LR D+AD RLT +LG ++R+ + Q+ + +++ Sbjct: 421 DEPYRMFTSRAEYRILLRQDDADYRLTSKAFELGIA---TKERYDWWKQKEESISKIIQF 477 Query: 481 LVLTSKNLSSTSISFKQDGKTRTA-----YEFLSYPDFSIQNLFSICPDARKF------- 528 TS + S ++ G T + ++ P ++ NL + P Sbjct: 478 CDETSIKPKEINASLERLGTTPIHSSIKISDLIARPQLTMNNLAEVIPHLNDILKAVPNR 537 Query: 529 SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 + + E +I Y Y R+ I A +++ E I F+YS L +S E ++KL ++ Sbjct: 538 QAEITEAAEIRIKYRGYIERERIIADKMRRLEDIRIKGRFNYSQLHEISTEGRQKLEKIQ 597 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIKK 615 P L +AS+I G++P+ +N+LLI + + Sbjct: 598 PETLAEASRIPGVSPSDINVLLILLGR 624 >gi|327312874|ref|YP_004328311.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Prevotella denticola F0289] gi|326945842|gb|AEA21727.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prevotella denticola F0289] Length = 623 Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust. Identities = 256/622 (41%), Positives = 365/622 (58%), Gaps = 15/622 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+VIGGGHAGCEAA AA +GA T L+T + IG MSCNPA+GG+ KG +VREIDAL Sbjct: 5 YDVLVIGGGHAGCEAATAAANMGADTCLVTMDMNKIGQMSCNPAVGGIAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG V DA IQFR+LN KGPAV PR Q DR + ++ + ++LD+ Q + Sbjct: 65 GGYMGMVTDATAIQFRMLNRSKGPAVWSPRAQCDRGKFIWEWRKRLDHTDHLDIFQDQAD 124 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 TE + I + TV++T GTFL G++HIG+ K+ GR + + S Sbjct: 125 ELLTENGKVLGIKTIWGICLYAQTVIVTAGTFLNGLMHIGRRKVEGGRCAEPAVHHFTES 184 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + + R+KTGTP R+D +++ +D+ E Q + FSF Q+ C T Sbjct: 185 ITRHGIRSERMKTGTPVRIDRRSVHFDEMESQPGETDYHQFSFFGPHRQLPQLPCWTCNT 244 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N + H ++ + S +++G I+S GPRYCPSIE K+V F +++ H +FLEPEG +T+ + Sbjct: 245 NEQVHEVLRSGLADSPLFNGQIQSTGPRYCPSIETKLVTFPDKHSHPLFLEPEGTDTNEM 304 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG S+++P EIQ + I IP L I RPGYAIEYDY +P +L +LE+K I GLF Sbjct: 305 YLNGFSSSMPWEIQLEAIHRIPALRDAKIYRPGYAIEYDYFDPTQLKHSLESKVIDGLFF 364 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ+NGTTGYEEA QG VAGIN+A +R +SYIGV+IDDLT+KGV EPYR Sbjct: 365 AGQVNGTTGYEEAGGQGTVAGINAALLCASKAPFVMNRDESYIGVLIDDLTTKGVDEPYR 424 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAEYRI LR D+AD RLT ++G R+ R+ ++Q+ + + TS Sbjct: 425 MFTSRAEYRILLRQDDADARLTEQAYEIGIA---RRNRYEWWLQKKANINRITDFCNNTS 481 Query: 486 KNLSSTSISFKQDGKTRTA-----YEFLSYPDFSIQNLFSICPDAR-------KFSSLVI 533 + +Q G + + ++ P + +NL ++ P + + Sbjct: 482 VKPDVVNGLLEQLGTSPIKGAARITDLVARPQVNFKNLSAVVPALKGAIEASPNRQEEIA 541 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E +I+ Y Y R+ + A+++ E I FDYS L LS E ++KL ++P L Sbjct: 542 EAAEIKLKYKGYIDRERVFAEKMHRLEDIKIKGYFDYSRLHDLSTECRQKLERIQPETLA 601 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I G++P+ +N+LL+ + + Sbjct: 602 QASRIPGVSPSDINVLLVLMGR 623 >gi|57168067|ref|ZP_00367206.1| glucose inhibited division protein A [Campylobacter coli RM2228] gi|57020441|gb|EAL57110.1| glucose inhibited division protein A [Campylobacter coli RM2228] Length = 597 Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust. Identities = 256/611 (41%), Positives = 363/611 (59%), Gaps = 43/611 (7%) Query: 27 LGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVK 86 +G T L+T IG+ SCNPAIGGL KGHLV+E+DA+ GLMG + D AGIQFR+LN Sbjct: 1 MGKKTLLLTTLIEQIGAASCNPAIGGLAKGHLVKELDAMGGLMGEITDEAGIQFRILNES 60 Query: 87 KGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIR 146 KG AV+G R Q D + YR+ + ++L NL++ Q +V E + + + Sbjct: 61 KGVAVQGSRAQIDMDKYRIIARNKLLKLPNLEISQEQVCELIYENGSVVGVKTNLQNTYE 120 Query: 147 CSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDG 206 V+LTTGTFL G+IH+G+ K+ AGR+G+ S +L + + GRLKTGT R+D Sbjct: 121 AKKVILTTGTFLNGLIHVGENKLTAGRVGELASVNLGQNLLSTSLKMGRLKTGTCPRVDA 180 Query: 207 KTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGD 266 K+I +D E Q+ D+ FSF T Q+ C I RTN TH II N + +++G Sbjct: 181 KSIDFDVLEIQYGDQNPKAFSFRTKNFNPIQLPCYIARTNTTTHEIIKNNFYRAPLFTGQ 240 Query: 267 IKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTI 326 I+ GPRYCPSIEDKI RF ++ H +F+EP+ ++ Y NG ST+LP E+Q Q +R++ Sbjct: 241 IEGVGPRYCPSIEDKINRFSDKESHHLFIEPQTIDATEYYINGFSTSLPYEVQTQMLRSV 300 Query: 327 PGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAG 386 G E+ I R GYAIEYDYI P EL+ TLETKKI L+ AGQINGTTGYEEAAAQG +AG Sbjct: 301 KGFEEAKITRFGYAIEYDYIEPTELYHTLETKKIKNLYCAGQINGTTGYEEAAAQGFMAG 360 Query: 387 INSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRL 446 +N+ + + R ++YIGV+IDDL KG EPYRMFTSRAE+R+ LR +NA RL Sbjct: 361 VNAVLALDNKEPFILRRDEAYIGVLIDDLVIKGTKEPYRMFTSRAEFRLLLREENAIVRL 420 Query: 447 TPIGMKLGCIGERR-------------------QKRFAKYIQEYNFLRSL----LKSLVL 483 G +LG + + +K F + FL S+ + S+V Sbjct: 421 GKYGKELGLLEDESYQFIENIRLNTQKGLELLLEKEFTPNTENNAFLASIGEEKITSIVN 480 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 K ++ +S ++ K T +E + ++S++ + + +A+ + + +++ Q+E Sbjct: 481 LQKIVARSSFDIEKLKKLNTIFENMD--EYSLREILN---EAKYYHYIAMQKSQVEKM-- 533 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 + +I+ K IP DFD++S+ LSNE+ EKL KP L AS+I G+TP Sbjct: 534 ----KNLIDMK---------IPSDFDFTSVSGLSNEVVEKLQKHKPLTLFAASEISGITP 580 Query: 604 AALNLLLIYIK 614 AAL++L IYIK Sbjct: 581 AALDILQIYIK 591 >gi|15643033|ref|NP_228076.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Thermotoga maritima MSB8] gi|7674053|sp|Q9WYA1|MNMG_THEMA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|4980759|gb|AAD35351.1|AE001708_19 glucose-inhibited division protein A [Thermotoga maritima MSB8] Length = 629 Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust. Identities = 260/621 (41%), Positives = 377/621 (60%), Gaps = 11/621 (1%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 +R YDVIV+G GHAG EAA AA++G ++T T+G CNPAIGG KG +VREI Sbjct: 9 DRVYDVIVVGAGHAGIEAALAAARMGFRVLVLTVNPDTVGWAPCNPAIGGPAKGVVVREI 68 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G M + D I R+LNV KGPAVR R Q D+ Y M+R++ + N+ + G Sbjct: 69 DALGGEMAKTTDETMINVRMLNVSKGPAVRALRAQIDKISYSRTMKRKLETNPNIVLRHG 128 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRC--STVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 V TEK + +V DN I V++TTGTFLRG I IG+ PAGRMG+ P+ Sbjct: 129 IVERILTEKGRVKGVV--DNYGIDYLGKAVIVTTGTFLRGKIFIGRSTFPAGRMGEFPAT 186 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIE 239 L S ++ F+ GR KTGTPAR+ ++I + E+Q + + FSF + ++ + Sbjct: 187 KLTESLIELGFEVGRFKTGTPARVLKRSINFSVMERQDTSDEPLAFSFFDEPRVLPKDYP 246 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGD--IKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 C +TRTN ETH II + ++ S +Y I+ GPRYCPSIEDK+V+F ++ HQ+F+EP Sbjct: 247 CWLTRTNPETHSIIKQYLEFSPLYGTVKLIEGIGPRYCPSIEDKVVKFKDKESHQVFVEP 306 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EG +T+ Y NG+ST+LP E Q + IR++ GLE + RP YAIEYDYI+P++L+PTLE+ Sbjct: 307 EGRDTEEYYLNGLSTSLPYEAQIKMIRSVKGLENAIVTRPAYAIEYDYIDPRQLYPTLES 366 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 K + L+ AGQ+NGT+GYEEAA QG++AGIN+A K + R+++YIGV+IDDL + Sbjct: 367 KLVENLYFAGQVNGTSGYEEAAGQGIIAGINAALKLRGEPPLILKRSEAYIGVLIDDLVT 426 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL 477 KGV EPYR+ TSRAEYR+ LR DNA RL G ++G I + ++ + N Sbjct: 427 KGVDEPYRLLTSRAEYRLLLRHDNAHLRLAKYGYRVGLIPKWFYEKVLSLERRINEEIER 486 Query: 478 LKSLVLTSKNLSS---TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIE 534 LK +++ + + TS+ + + Y+ L P S L + P+ V+E Sbjct: 487 LKKVIVKPSDRVNDLLTSLRTSPLKEPVSFYQLLKRPQLSYSALKFLDPNPID-DPEVVE 545 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I Y Y + E + E IP D DY ++P LS E ++KL ++P ++ Q Sbjct: 546 QVEINVKYEGYIQKMFEEVAVFEKYENYEIPHDLDYDAVPNLSTEARDKLKKIRPRSIGQ 605 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 A +I G+ P+ ++ L+IY+ + Sbjct: 606 AMRIPGINPSDISNLIIYLDR 626 >gi|257452321|ref|ZP_05617620.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Fusobacterium sp. 3_1_5R] gi|317058864|ref|ZP_07923349.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG 2 [Fusobacterium sp. 3_1_5R] gi|313684540|gb|EFS21375.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG 2 [Fusobacterium sp. 3_1_5R] Length = 630 Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust. Identities = 283/628 (45%), Positives = 383/628 (60%), Gaps = 21/628 (3%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DVIV+G GHAG EAA AA+LG TA+ T IG MSCNP++GG K HLVREID Sbjct: 3 QEFDVIVVGAGHAGAEAALAAARLGKKTAIFTISLDNIGVMSCNPSLGGPAKSHLVREID 62 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G MGR D IQ RVLN KKGPAVR R QAD+ Y M+R I + ENL IQG Sbjct: 63 ALGGEMGRNIDKTYIQIRVLNTKKGPAVRSLRAQADKIRYAKEMKRTIETCENLSAIQGM 122 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V+ E I +++ R ++L TGTFLRG+IHIG+ GRMG+ S L Sbjct: 123 VSELLVEDGKAVGIKIREGVEYRAKRIILATGTFLRGLIHIGESHFSGGRMGELSSEDLP 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFAD-ERLIPFSFMT-DK--ITNRQIE 239 S +K D R KTGTP+R+D +TI + E+Q + +++ FS T DK RQI Sbjct: 183 LSLLKHGLDLQRFKTGTPSRIDARTIDFSVLEEQPGETAKILKFSNRTSDKELKDRRQIS 242 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C I TN E H I N + S +++G I+ GPRYCPSIEDK+ R+ ++ H +FLE EG Sbjct: 243 CYIAHTNEEVHTEIKNNRERSPLFNGTIQGLGPRYCPSIEDKVYRYADKPQHHLFLEREG 302 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 +T+ +Y G+S++LP ++Q I I G E I+R GYAIEYDYI P E+ +LE++ Sbjct: 303 YDTNEIYLGGLSSSLPVDVQENMIHKIHGFEHAQIMRYGYAIEYDYIPPSEIQYSLESRT 362 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I LFLAGQINGT+GYEEA AQGL+AGIN+ R + D I R DSYIG +IDDL KG Sbjct: 363 IPNLFLAGQINGTSGYEEAGAQGLMAGINAVRSIDGKDPIVLDRADSYIGTLIDDLVLKG 422 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR-QKRFAKYIQEYNFLRSLL 478 EPYRMFT+R+EYR+ LR DNAD RL+ IG ++G + E QK K N + +L Sbjct: 423 TNEPYRMFTARSEYRLVLREDNADLRLSKIGYEVGLVSEEEYQKVETKRENVRNIIEALQ 482 Query: 479 KSLV-----LTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVI 533 ++ V ++ LS +DG + +E L P+ + +++ + + F Sbjct: 483 QNFVGPGNPRVNERLSEKGEEILKDGA--SLFEVLRRPEITYEDIEYMTEGTKTFDFTSY 540 Query: 534 E-----RLQIESSYAAYTGR--QMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSI 586 + ++++++ Y+ Y R +MIE K EEKR IP+D DY SL + E KEKL Sbjct: 541 DEDTKYQVEVQTKYSGYIERSFKMIE-KHKSMEEKR-IPQDIDYDSLQNIPKEAKEKLKK 598 Query: 587 LKPFNLLQASKIEGMTPAALNLLLIYIK 614 ++P N+ QAS+I G++PA + +LLIY+K Sbjct: 599 IRPNNIGQASRISGVSPADIQVLLIYLK 626 >gi|268320268|ref|YP_003293924.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Lactobacillus johnsonii FI9785] gi|262398643|emb|CAX67657.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Lactobacillus johnsonii FI9785] Length = 632 Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust. Identities = 259/618 (41%), Positives = 361/618 (58%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAG EAA AA++G T L+T + M CNP++GG KG +VREIDAL Sbjct: 9 YDVIVVGAGHAGVEAALAAARMGEKTLLLTINLDMVAFMPCNPSVGGPAKGTVVREIDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ DA IQ R+LN KGPAVR R QAD+ Y M+ I ++ NL + Q Sbjct: 69 GGEMGKNIDATYIQMRMLNTGKGPAVRALRAQADKWQYHERMKDTIENEPNLTLRQAVAD 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + ++ + +VVLTTGT RG I IG+L +G PS L + Sbjct: 129 ELIVEDGVCKGLITNTGAKYYAKSVVLTTGTAARGKIIIGELAYSSGPNNSLPSIKLPEN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 K F R KTGTP R+DG TI + KT+++ D+ FS+ + Q+ C +T Sbjct: 189 LEKLGFKLRRFKTGTPPRVDGNTIDYSKTQEEPGDKEPRHFSYTSKDSDYLEDQMSCYMT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II N+ + ++SG IK GPRYCPSIEDK+VRF +++ HQIFLEPEG +T Sbjct: 249 YTNTVTHDIIRANLDRAPMFSGVIKGVGPRYCPSIEDKVVRFADKDRHQIFLEPEGRHTK 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y ST++PEE+Q + + ++ GLEK ++RPGYAIEYD I P +L TLETK I L Sbjct: 309 EIYVGDFSTSMPEEVQLKMLHSVAGLEKAELMRPGYAIEYDVIEPWQLKHTLETKNIKHL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ+NGT+GYEEAA QGL+AGIN+A + R ++YIGV+IDDL +KG EP Sbjct: 369 FTAGQMNGTSGYEEAAGQGLIAGINAALSAQNKPGFTLQRDEAYIGVLIDDLVTKGTNEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYN-FLRSLLKSLV 482 YR+ TSRAEYR+ LR DNAD RLT G +LG I E R K F Q + + ++ K + Sbjct: 429 YRLLTSRAEYRLLLRHDNADLRLTEKGHELGLISEDRYKEFQDKKQAISQAMEAIKKVTI 488 Query: 483 LTSKNLSSTSISFKQD--GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + + S KQD + +FL P + + + + V E+++I Sbjct: 489 HPTDEVQEYLASVKQDRLNAGVSGADFLKRPRVTFDAVEKLSGETLATDRYVKEQVEIAL 548 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y ++ + E + IP D DY+++P+L+ E ++K ++P ++ QA +I G Sbjct: 549 KYEGYIKKEKTLVDRLHRLESKKIPVDIDYNAIPSLATEARQKFEKIRPESIAQAERISG 608 Query: 601 MTPAALNLLLIYIKKNTV 618 + PA L +L YI++ + Sbjct: 609 VNPADLAILTAYIQQGRI 626 >gi|86134803|ref|ZP_01053385.1| glucose inhibited division protein A [Polaribacter sp. MED152] gi|85821666|gb|EAQ42813.1| glucose inhibited division protein A [Polaribacter sp. MED152] Length = 625 Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust. Identities = 270/623 (43%), Positives = 373/623 (59%), Gaps = 12/623 (1%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + +R+YDVIV+GGGHAG EAAA AA +GA T LIT I MSCNPA+GG+ KG ++R Sbjct: 3 LFSRTYDVIVVGGGHAGSEAAAAAANMGAHTLLITMNLQNIAQMSCNPAMGGIAKGQIIR 62 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G G V D IQF++LN KGPA+ PR Q+DR + + + EN+D Sbjct: 63 EIDALGGYSGIVTDKTAIQFKMLNKSKGPAMWSPRAQSDRMQFAECWRTMLEQTENVDFY 122 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V G + N I + I TV++T GTFL G+IHIG GR G++ S Sbjct: 123 QDSVNGLVFDGNKIIGVKTALGLEINAKTVIITAGTFLNGLIHIGDKSFGGGRAGEAASR 182 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQIE 239 + + F+ GR+KTGTP R+DG+++ + K +Q DE FS++ T +Q Sbjct: 183 GITEDLVAKGFEAGRMKTGTPPRVDGRSLDYSKMTEQPGDEITEKFSYLPTTTALKKQRS 242 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +T TN E H ++ E S +++G I+S GPRYCPS+EDK+ RF + HQIF+EPEG Sbjct: 243 CWLTYTNPEVHNLLREGFDRSPMFNGRIQSSGPRYCPSVEDKVDRFATKERHQIFVEPEG 302 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 +T +Y NG ST+LPE+IQ + IR + G E V +R GYAIEYD+ P +L +LETK Sbjct: 303 WSTIEMYVNGFSTSLPEDIQDKAIRAVAGFENVKFLRYGYAIEYDFFQPTQLKHSLETKL 362 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I LF AGQINGTTGYEEAAAQGL+AG+N+A K D R ++YI V+IDDL +KG Sbjct: 363 IENLFFAGQINGTTGYEEAAAQGLMAGVNAALKVQGKDPFTLKRDEAYIAVLIDDLITKG 422 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR LR DNAD RLTP G +LG + R R + ++ + L L+ Sbjct: 423 TEEPYRMFTSRAEYRTLLRQDNADLRLTPKGFELGLASKERMDRVLEKQRKTDLLIQFLE 482 Query: 480 SL---------VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS 530 +L +KNL+ + S K A L + DF S + Sbjct: 483 KTSVKKEEVNPILEAKNLALINQSMKL--FKIAARPQLDFSDFESVEKLSAFIEENDIDK 540 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 +IE+ +I Y+ Y ++ A ++ E IP F+Y L +LS E +EKL+ ++P Sbjct: 541 EIIEQAEIHLKYSGYINKEKNNADKLNRLENVKIPASFNYQKLQSLSFEAREKLTKIQPT 600 Query: 591 NLLQASKIEGMTPAALNLLLIYI 613 ++ QAS+I G++P+ +++LL+Y+ Sbjct: 601 SISQASRISGVSPSDISVLLVYM 623 >gi|77410825|ref|ZP_00787182.1| glucose inhibited division protein A [Streptococcus agalactiae CJB111] gi|77163043|gb|EAO73997.1| glucose inhibited division protein A [Streptococcus agalactiae CJB111] Length = 604 Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust. Identities = 260/598 (43%), Positives = 365/598 (61%), Gaps = 14/598 (2%) Query: 27 LGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVK 86 +G T L T + M CNP+IGG KG +VREIDAL G MG+ D IQ ++LN Sbjct: 1 MGCKTLLATINLEMLAFMPCNPSIGGSAKGIVVREIDALGGEMGKNIDKTYIQMKMLNTG 60 Query: 87 KGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIR 146 KGPAVR R QAD+ LY M++ + QENL + Q + E + + N Sbjct: 61 KGPAVRALRAQADKALYAQTMKQTVEKQENLTLRQAMIDEILVEDGKVVGVRTATNQKFS 120 Query: 147 CSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDG 206 +VV+TTGT LRG I +G+LK +G S +L ++ + GR KTGTP R+ Sbjct: 121 AKSVVITTGTALRGEIILGELKYSSGPNNSLASVTLADNLRDLGLEIGRFKTGTPPRVKA 180 Query: 207 KTIIWDKTEKQFADERLIPFSFMT---DKITNRQIECGITRTNLETHRIIMENIKHSAIY 263 +I +++TE Q DE+ FSFM+ D IT+ Q+ C +T TN +H II +N+ + ++ Sbjct: 181 SSINYEETEIQPGDEQPNHFSFMSRDEDYITD-QVPCWLTYTNTLSHDIINQNLHRAPMF 239 Query: 264 SGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFI 323 SG +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG +T+ VY G+ST+LPE++Q + Sbjct: 240 SGIVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRHTEEVYVQGLSTSLPEDVQVDLL 299 Query: 324 RTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGL 383 R+I GLE ++R GYAIEYD + P +L TLETK I+GLF AGQ NGT+GYEEAA QGL Sbjct: 300 RSIKGLENAEMMRTGYAIEYDIVLPHQLRATLETKVIAGLFTAGQTNGTSGYEEAAGQGL 359 Query: 384 VAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNAD 443 VAGIN+A K + R+D+YIGVMIDDL +KG LEPYR+ TSRAEYR+ LR DNAD Sbjct: 360 VAGINAALKVQGKPELILKRSDAYIGVMIDDLVTKGTLEPYRLLTSRAEYRLILRHDNAD 419 Query: 444 NRLTPIGMKLGCIGERR----QKRFAKYIQEYNFLRSL-LKSLVLTSKNLSSTSISFKQD 498 RLT IG ++G + E R +KR ++ E L S+ LK + T+K + + FK Sbjct: 420 MRLTEIGYEIGLVDEERYAIFKKRQMQFENELERLDSIKLKPVSETNKRIQ--ELGFKPL 477 Query: 499 GKTRTAYEFLSYPD--FSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEI 556 TA EF+ P +++ F C D S VIE L+ E Y Y + + + ++ Sbjct: 478 TDALTAKEFMRRPQITYAVATDFVGCTD-EPLDSKVIELLETEIKYEGYIKKALDQVAKM 536 Query: 557 KFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIK 614 K E++ IP D+ + +++ E ++K + P L QAS+I G+ PA +++L++Y++ Sbjct: 537 KRMEEKRIPPHIDWDDIDSIATEARQKFKKINPETLGQASRISGVNPADISILMVYLE 594 >gi|227889161|ref|ZP_04006966.1| glucose-inhibited division protein A [Lactobacillus johnsonii ATCC 33200] gi|227850390|gb|EEJ60476.1| glucose-inhibited division protein A [Lactobacillus johnsonii ATCC 33200] Length = 634 Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust. Identities = 259/618 (41%), Positives = 361/618 (58%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAG EAA AA++G T L+T + M CNP++GG KG +VREIDAL Sbjct: 11 YDVIVVGAGHAGVEAALAAARMGEKTLLLTINLDMVAFMPCNPSVGGPAKGTVVREIDAL 70 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ DA IQ R+LN KGPAVR R QAD+ Y M+ I ++ NL + Q Sbjct: 71 GGEMGKNIDATYIQMRMLNTGKGPAVRALRAQADKWQYHERMKDTIENEPNLTLRQAVAD 130 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + ++ + +VVLTTGT RG I IG+L +G PS L + Sbjct: 131 ELIVEDGVCKGLITNTGAKYYAKSVVLTTGTAARGKIIIGELAYSSGPNNSLPSIKLPEN 190 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 K F R KTGTP R+DG TI + KT+++ D+ FS+ + Q+ C +T Sbjct: 191 LEKLGFKLRRFKTGTPPRVDGNTIDYSKTQEEPGDKEPRHFSYTSKDSDYLEDQMSCYMT 250 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II N+ + ++SG IK GPRYCPSIEDK+VRF +++ HQIFLEPEG +T Sbjct: 251 YTNTVTHDIIRANLDRAPMFSGVIKGVGPRYCPSIEDKVVRFADKDRHQIFLEPEGRHTK 310 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y ST++PEE+Q + + ++ GLEK ++RPGYAIEYD I P +L TLETK I L Sbjct: 311 EIYVGDFSTSMPEEVQLKMLHSVAGLEKAELMRPGYAIEYDVIEPWQLKHTLETKNIKHL 370 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ+NGT+GYEEAA QGL+AGIN+A + R ++YIGV+IDDL +KG EP Sbjct: 371 FTAGQMNGTSGYEEAAGQGLIAGINAALSAQNKPGFTLQRDEAYIGVLIDDLVTKGTNEP 430 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYN-FLRSLLKSLV 482 YR+ TSRAEYR+ LR DNAD RLT G +LG I E R K F Q + + ++ K + Sbjct: 431 YRLLTSRAEYRLLLRHDNADLRLTEKGHELGLISEDRYKEFQDKKQAISQAMEAIKKVTI 490 Query: 483 LTSKNLSSTSISFKQD--GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + + S KQD + +FL P + + + + V E+++I Sbjct: 491 HPTDEVQEYLASVKQDRLNAGVSGADFLKRPRVTFDAVEKLSGETLATDRYVKEQVEIAL 550 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y ++ + E + IP D DY+++P+L+ E ++K ++P ++ QA +I G Sbjct: 551 KYEGYIKKEKTLVDRLHRLESKKIPVDIDYNAIPSLATEARQKFEKIRPESIAQAERISG 610 Query: 601 MTPAALNLLLIYIKKNTV 618 + PA L +L YI++ + Sbjct: 611 VNPADLAILTAYIQQGRI 628 >gi|240276892|gb|EER40403.1| mitochondrial translation optimization protein [Ajellomyces capsulatus H143] Length = 659 Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust. Identities = 269/638 (42%), Positives = 370/638 (57%), Gaps = 65/638 (10%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDV+VIGGGHAG EA A AA+LGA TAL+T S IG SCNP+IGG+GKG ++REID Sbjct: 36 QAYDVVVIGGGHAGSEACAAAARLGARTALVTPSRSNIGVCSCNPSIGGIGKGTMIREID 95 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDG+ G+VAD AGIQFR+LN KG AV GPR Q DR LYR M E+ + L +++G+ Sbjct: 96 ALDGVAGKVADKAGIQFRILNRSKGEAVWGPRAQIDRVLYRQNMLDELSNTPGLSIVEGK 155 Query: 124 VAGFNTEKN--------IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMG 175 V K+ I + ++ +I V++TTGTFL G IHIG P+GR+G Sbjct: 156 VGDIIVSKDNLPAGSQGKIVGVRLESGEVIPTGRVIITTGTFLGGEIHIGLDVFPSGRLG 215 Query: 176 DSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT- 234 ++ + L S + F GRLKTGTP RLD KTI + E Q D IPFS++ +++ Sbjct: 216 EAATFGLSRSLREAGFQLGRLKTGTPPRLDKKTIDFSNLEVQPGDSPPIPFSYLNNRVDV 275 Query: 235 --NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQ 292 Q+ C C RF ++ H Sbjct: 276 DDEDQLPC----------------------------------C--------RFKDKQRHM 293 Query: 293 IFLEPEGLNTD-VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKEL 351 I+LEPEG D V+YPNGIS +P + Q +RT+ GLE V +++ GY +EYDY++P+ L Sbjct: 294 IWLEPEGFEPDEVIYPNGISMTIPADAQLAVLRTVAGLENVRMLQAGYGVEYDYVDPRSL 353 Query: 352 FPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 PTLETK ISGL+LAGQINGTTGYEEAA QG++AGIN+ S SR+D +IG+M Sbjct: 354 RPTLETKLISGLYLAGQINGTTGYEEAAGQGILAGINAGLASKSKPPFTLSRSDGFIGIM 413 Query: 412 IDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEY 471 +DDL +KGV EPYRMFTSR+EYRI+ R DNAD RLT G ++G +G++R + F++ + Sbjct: 414 VDDLITKGVSEPYRMFTSRSEYRIATRSDNADLRLTARGREVGVVGDKRWEHFSQVQAQI 473 Query: 472 NFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLF-SICP------- 523 L++LL++ S S D R+A++ L D SI ++ I P Sbjct: 474 TELQTLLENTKFPSALWSRKGFGVHYDNNVRSAFDLLRLRDISIDDIIPHIEPPSSSRSG 533 Query: 524 ---DARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNEL 580 A F+S + R+ +E YA Y + + +E L+P D DYS + LS E Sbjct: 534 KAYTASSFASEIKHRVAVEGRYAPYVKMHADRTRNFEKDEALLLPPDIDYSLITGLSAEE 593 Query: 581 KEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTV 618 + L ++P ++ A +IEGMTP A LL+Y+++ T Sbjct: 594 RAALENVRPESIGMARRIEGMTPVAALKLLVYVRRTTA 631 >gi|283768648|ref|ZP_06341560.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bulleidia extructa W1219] gi|283105040|gb|EFC06412.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bulleidia extructa W1219] Length = 624 Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust. Identities = 263/628 (41%), Positives = 371/628 (59%), Gaps = 32/628 (5%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IVIG GHAG EA AA+LG TALIT TIG M CNP++GG KG + REIDAL Sbjct: 4 YDIIVIGAGHAGIEAGLAAARLGKKTALITINQETIGKMPCNPSVGGPAKGIVTREIDAL 63 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG VAD +QF++LN KGP VR R Q+D+ Y M+ L QENL VI+ V Sbjct: 64 GGQMGYVADKTALQFKMLNSAKGPGVRALRVQSDKLAYSSMMKEICLKQENLTVIESLVE 123 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 EK + +QD S++ V++TTGT++ G I G + +N L S Sbjct: 124 RLIVEKQEARGVELQDGSVLLSRAVIMTTGTYMSGKNMISDDVKIGGPDLEPTTNQLSES 183 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKIT--NRQIECG 241 + T RLKTGTP R+ TI + KT+ + FS +T D + +Q+ C Sbjct: 184 LRQVGVRTFRLKTGTPPRIRTSTIDFSKTKLEPGTPGFYHFSSLTKPDDVLPFEKQVSCY 243 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T T ETH II+ N+ S++YSG ++ GPRYCPSIEDK+VRF ++ H +FLEPE L+ Sbjct: 244 MTHTVPETHEIILNNLTKSSMYSGVVEGVGPRYCPSIEDKLVRFKDKERHLLFLEPESLS 303 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 Y G S++LP+E+Q Q + T+PGLE I++ YAIEYD ++P ++ + E+K I Sbjct: 304 LPTTYIQGFSSSLPKEVQFQMVHTLPGLENCEIMKYAYAIEYDALDPVQMKSSFESKVIK 363 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 LF AGQINGT+GYEEAA QGL+AGIN+ RK ++ + I FSR +YIGV++DDLT+KG Sbjct: 364 NLFTAGQINGTSGYEEAAGQGLLAGINAVRKLDEKEPIIFSRDQAYIGVLVDDLTTKGTK 423 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAEYR+ LR DNA+ RLT IG ++G I + R + FLR+ +SL Sbjct: 424 EPYRLLTSRAEYRLLLRHDNAEERLTGIGHQIGLISDERYE---------AFLRN--QSL 472 Query: 482 VLTSKNLSSTSISFKQDGKTRT-----AYEFLSY----------PDFSIQNLFSICPDAR 526 + K TS+ D + + Y+ LS+ P ++LF + + Sbjct: 473 LALKKEELQTSLFSMNDDRVKQYLLNHGYDDLSFSMNGEDLVKRPRLQARDLFKL--QGK 530 Query: 527 KFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSI 586 + + E++ I+ Y Y + EA+ +K + R++ + DY +P LS E ++KL Sbjct: 531 EIDDNIAEKIDIDIKYEGYIAKAKREAERLKTMDHRMLSETLDYDEIPNLSIEGRQKLKE 590 Query: 587 LKPFNLLQASKIEGMTPAALNLLLIYIK 614 KP L +AS+I G+ PA + +L +Y+K Sbjct: 591 FKPETLGKASRISGVNPADIAVLSMYLK 618 >gi|257465888|ref|ZP_05630199.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Fusobacterium gonidiaformans ATCC 25563] gi|315917044|ref|ZP_07913284.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG 2 [Fusobacterium gonidiaformans ATCC 25563] gi|313690919|gb|EFS27754.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG 2 [Fusobacterium gonidiaformans ATCC 25563] Length = 630 Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust. Identities = 283/628 (45%), Positives = 384/628 (61%), Gaps = 21/628 (3%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DVIV+G GHAG EAA AA+LG TA+ T IG MSCNP++GG K HLVREID Sbjct: 3 QEFDVIVVGAGHAGAEAALAAARLGKKTAIFTISLDNIGVMSCNPSLGGPAKSHLVREID 62 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G MGR D IQ RVLN KKGPAVR R QAD+ Y M+R I + ENL IQG Sbjct: 63 ALGGEMGRNIDKTYIQIRVLNTKKGPAVRSLRAQADKIRYAKEMKRTIETCENLSAIQGM 122 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V+ E I +++ R ++L TGTFLRG+IHIG+ GRMG+ S L Sbjct: 123 VSELLVEDGKAVGIKIREGVEYRAKRIILATGTFLRGLIHIGESHFSGGRMGELSSEDLP 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFAD-ERLIPFSFMT-DK--ITNRQIE 239 S +K D R KTGTP+R+D +TI + E+Q + +++ FS T DK RQI Sbjct: 183 LSLLKHGLDLQRFKTGTPSRIDARTIDFSVLEEQPGETAKILKFSNRTSDKELKDRRQIS 242 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C I TN E H I N + S +++G I+ GPRYCPSIEDK+ R+ ++ H +FLE EG Sbjct: 243 CYIAHTNEEVHTEIKNNRERSPLFNGTIQGLGPRYCPSIEDKVYRYADKPQHHLFLEREG 302 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 +T+ +Y G+S++LP ++Q I I G E+ I+R GYAIEYDYI P E+ +LE++ Sbjct: 303 YDTNEIYLGGLSSSLPVDVQENMIHKIHGFEQARIMRYGYAIEYDYIPPSEIQYSLESRT 362 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I LFLAGQINGT+GYEEA AQGL+AGIN+ R + D I R DSYIG +IDDL KG Sbjct: 363 IPNLFLAGQINGTSGYEEAGAQGLMAGINAVRSIDGKDPIILDRADSYIGTLIDDLVLKG 422 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR-QKRFAKYIQEYNFLRSLL 478 EPYRMFT+R+EYR+ LR DNAD RL+ IG ++G + E QK AK + +L Sbjct: 423 TNEPYRMFTARSEYRLVLREDNADLRLSKIGYEVGLVSEEEYQKVEAKRENVRKIIEALQ 482 Query: 479 KSLV-----LTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVI 533 ++ V ++ LS +DG + +E L P+ + +++ + + F Sbjct: 483 QNFVGPGNPRVNERLSEKGEQILKDGA--SLFEVLRRPEITYEDVEYMTEGTKTFDFTSY 540 Query: 534 E-----RLQIESSYAAYTGR--QMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSI 586 + ++++++ Y+ Y R +MIE K EEKR IP+D DY SL + E KEKL Sbjct: 541 DEDTKYQVEVQTKYSGYIERSFKMIE-KHKSMEEKR-IPQDIDYDSLQNIPKEAKEKLKK 598 Query: 587 LKPFNLLQASKIEGMTPAALNLLLIYIK 614 ++P N+ QAS+I G++PA + +LLIY+K Sbjct: 599 IRPNNIGQASRISGVSPADIQVLLIYLK 626 >gi|148555755|ref|YP_001263337.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Sphingomonas wittichii RW1] gi|205831558|sp|A5VA83|MNMG_SPHWW RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|148500945|gb|ABQ69199.1| glucose inhibited division protein A [Sphingomonas wittichii RW1] Length = 619 Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust. Identities = 279/613 (45%), Positives = 380/613 (61%), Gaps = 2/613 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 S+DVIV+GGGHAGCEAAA AA+ GA TAL++ + IG+MSCNPAIGGLGKGHLVRE+DA Sbjct: 4 SFDVIVVGGGHAGCEAAAAAARTGARTALVSMRRDMIGAMSCNPAIGGLGKGHLVREVDA 63 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG-- 122 DGL+ R AD A I +R+LN KG AV+GPR QADR+LY+ A+ + +L++++G Sbjct: 64 CDGLIARAADRAAIHYRMLNSSKGAAVQGPRVQADRKLYKAAIHDLLAELPSLEIVEGSA 123 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 E + S +V+ D ++ VVL TGTFL +H G GR+G++ + L Sbjct: 124 ERLLLDDVSRGTSGLVLADGRELKAGAVVLATGTFLNARLHFGMDCRTGGRVGEAAAVGL 183 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGI 242 D RLKTGTP RLDG+TI W + ++Q +D FS +T Q+ C I Sbjct: 184 AEQLRALDLPIARLKTGTPPRLDGRTIDWARLDRQPSDGEGWTFSALTPHRLVPQLACAI 243 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 TRTN TH +I + S ++SG I GPRYCPSIEDK+ RFG+R+GHQIFLEPEGL+ Sbjct: 244 TRTNQRTHDVIRAGLDRSPLFSGAITGVGPRYCPSIEDKVHRFGDRDGHQIFLEPEGLDD 303 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 VYPNG+ST+LPE++Q +RT+PGLE+V I++PGYA+EYDYI+P+ L L + + G Sbjct: 304 PTVYPNGVSTSLPEDVQLAMLRTVPGLERVEILQPGYAVEYDYIDPRALTAGLALRALPG 363 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL AG+N+A + I F R SYIGVMIDDLT +GV E Sbjct: 364 LFCAGQINGTTGYEEAAAQGLAAGMNAAAFAAGRPEIHFDRATSYIGVMIDDLTLQGVSE 423 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRM T+RAEYR+ LR DNA RLT G I R+ + + L + Sbjct: 424 PYRMLTARAEYRLRLRADNAGTRLTSWADAHGAISAARRMFHVEREARRIAMADCLDRRI 483 Query: 483 LTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSY 542 S L + + D R+ E+L +P+ L + P+ V + + Y Sbjct: 484 AGSAELIAAGAAVAADHARRSLTEWLRFPEVGDAELTVLAPELVDVPEDVRAEVIQDGRY 543 Query: 543 AAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMT 602 A Y RQ E ++ +E+ + DY ++ LSNE+ E+L+ +P +L A ++ G+T Sbjct: 544 APYLARQDQEIARLRADERIGLAVIVDYGAIAGLSNEMVERLNAARPADLAAAGRVRGVT 603 Query: 603 PAALNLLLIYIKK 615 PAAL ++++ ++ Sbjct: 604 PAALAAIMVHARR 616 >gi|171920380|ref|ZP_02931708.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|186701825|ref|ZP_02971495.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|171902814|gb|EDT49103.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|186701112|gb|EDU19394.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 614 Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust. Identities = 248/614 (40%), Positives = 366/614 (59%), Gaps = 7/614 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIG GHAG EAA + L TALIT IG M CNP+IGG KG + REID Sbjct: 2 KKYDVIVIGAGHAGLEAAFATSNLNLQTALITLDEKGIGMMPCNPSIGGPAKGIVTREID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G+ G+ ADA +Q ++LN KGP V R Q D+ Y+ +++I Q+NLD+I E Sbjct: 62 ALGGIQGKAADATTMQMKILNSSKGPGVWAIRAQIDKIAYQRWFKQQIKQQKNLDLIIAE 121 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V+ E NII +++ D +I + V++TTGT+L+ + H G + + G G + L Sbjct: 122 VSDLLVENNIIKGVILSDQKIIYANYVIITTGTYLKSITHRGSVCVDEGADGTKNAKFLS 181 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KITNRQIECG 241 ++ +K F RLKTGTPAR+ +I + + + I FS K + Q+ C Sbjct: 182 DALVKLGFKLIRLKTGTPARIKKDSIDFTNMILEPGTNQKIAFSHYHPVYKPYDEQLPCH 241 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 I TN +TH+II EN+ SA+Y G I GPRYCPSIEDKIV+F E+ HQIF+EPE Sbjct: 242 IIYTNEQTHQIIRENLNKSAMYGGMISGIGPRYCPSIEDKIVKFSEKPRHQIFVEPESYE 301 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 D +Y G ST++P ++Q + IR++PGLE I++ YAIEYD I+P +L+P+LE+K + Sbjct: 302 LDSMYLGGFSTSMPIDVQEKMIRSLPGLESCKILKYAYAIEYDAIDPTQLYPSLESKLVK 361 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 LF AGQINGT+GYEEAAAQGL+A IN +K + + R +YIGVMIDD+ +KGV+ Sbjct: 362 NLFFAGQINGTSGYEEAAAQGLMAAINVNQKYQNKEPVILGRDQAYIGVMIDDIVTKGVV 421 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAE+R++LR DNAD+RL IG ++G + + + + +Y+ ++ +L L Sbjct: 422 EPYRLLTSRAEHRLALRNDNADDRLMKIGFEIGLL---KSEVYDQYLNNLKQIKEILNWL 478 Query: 482 VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 T+ + F ++L P+ + +L CP + +I ++QI+ Sbjct: 479 KTTTVG-QIDDLKFTTLKTNSYLIDYLKRPEIKLNDLLIYCP-IKIEDEQIINKVQIQVK 536 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 + Y Q K++K + DY +P +S E +KL+ +KP +L QAS+I G+ Sbjct: 537 FEGYIKNQEENLKQLKRLNNIKLHTIVDYKEVPNISLETIDKLNKIKPLDLEQASRISGV 596 Query: 602 TPAALNLLLIYIKK 615 + ++ Y+++ Sbjct: 597 NLTDIAMIKYYLER 610 >gi|116630434|ref|YP_819587.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus gasseri ATCC 33323] gi|116096016|gb|ABJ61168.1| tRNA uridine 5-carboxymethylaminomethyl modification FAD-utilizing enzyme [Lactobacillus gasseri ATCC 33323] Length = 637 Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust. Identities = 258/618 (41%), Positives = 359/618 (58%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAG EAA AA++G T L+T + M CNP++GG KG +VREIDAL Sbjct: 15 YDVIVVGAGHAGVEAALAAARMGEKTLLLTINLDMVAFMPCNPSVGGPAKGTVVREIDAL 74 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ DA IQ R+LN KGPAVR R QAD+ Y M+ I ++ NL + Q Sbjct: 75 GGEMGKNIDATYIQMRMLNTGKGPAVRALRAQADKWQYHEHMKDTIENEPNLTLRQAVAD 134 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E ++ + +VVLTTGT RG I IG+L +G PS L + Sbjct: 135 ELIVEDGACKGLITNTGAKYHAKSVVLTTGTAARGKIIIGELTYSSGPNNSLPSIKLPEN 194 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 K F R KTGTP R+DG T+ + KT+++ D+ FS+ + Q+ C +T Sbjct: 195 LEKLGFKLRRFKTGTPPRVDGNTVDYSKTQEEPGDKEPRHFSYTSKDSDYLKDQMSCYMT 254 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II N+ + ++SG IK GPRYCPSIEDK+VRF +++ HQIFLEPEG NT Sbjct: 255 YTNTVTHDIIRANLDRAPMFSGVIKGVGPRYCPSIEDKVVRFADKDRHQIFLEPEGRNTK 314 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y ST++PEE+Q + + ++ GLEK ++RPGYAIEYD I P +L TLETK I L Sbjct: 315 EIYVGDFSTSMPEEVQLKMLHSVAGLEKAELMRPGYAIEYDVIEPWQLKHTLETKNIKHL 374 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ+NGT+GYEEAA QGL+AGIN+A + R ++YIGV+IDDL +KG EP Sbjct: 375 FTAGQMNGTSGYEEAAGQGLIAGINAALSAQNKPGFTLQRDEAYIGVLIDDLVTKGTNEP 434 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT G +LG I E R +F Q + + +K + + Sbjct: 435 YRLLTSRAEYRLLLRHDNADLRLTEKGHELGLISEERYAKFEAKKQAISRAMAAIKKVTI 494 Query: 484 -TSKNLSSTSISFKQD--GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + + S KQD + +FL P + + + V E+++I Sbjct: 495 HPTDEVQEYLASVKQDRLNAGVSGADFLKRPRVTFDAVEKLSGQTLATDRYVKEQVEIAL 554 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y ++ + E + IP D DY+++P+L+ E ++K ++P ++ QA +I G Sbjct: 555 KYEGYIKKEKTLVDRLHRLESKKIPVDIDYNAIPSLATEARQKFEKIRPESIAQAERISG 614 Query: 601 MTPAALNLLLIYIKKNTV 618 + PA L +L YI++ + Sbjct: 615 VNPADLAILTAYIQQGRI 632 >gi|183508643|ref|ZP_02958143.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|182676109|gb|EDT88014.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ureaplasma parvum serovar 14 str. ATCC 33697] Length = 614 Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust. Identities = 247/614 (40%), Positives = 367/614 (59%), Gaps = 7/614 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIG GHAG EAA + L TALIT IG M CNP+IGG KG + REID Sbjct: 2 KKYDVIVIGAGHAGLEAAFATSNLNLQTALITLDEKGIGMMPCNPSIGGPAKGIVTREID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G+ G+ ADA +Q ++LN KGP V R Q D+ Y+ +++I Q NLD+I E Sbjct: 62 ALGGIQGKAADATTMQMKILNSSKGPGVWAIRAQIDKIAYQRWFKQQIKQQINLDLIIAE 121 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V+ E NI+ ++++D +I+ V++TTGT+L+ + H G + + G G + L Sbjct: 122 VSDLLVENNIVKGVILRDQKIIQADYVIITTGTYLKSITHRGSVCVDEGADGTKNAKFLS 181 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KITNRQIECG 241 ++ +K F+ RLKTGTPAR+ +I + + + I FS K + Q+ C Sbjct: 182 DALVKLGFELIRLKTGTPARIKKDSIDFTNMILEPGTNQKIAFSHYHPVYKPYDEQLPCH 241 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 I TN +TH+II EN+ SA+Y G I GPRYCPSIEDKIV+F E+ HQIF+EPE Sbjct: 242 IIYTNEQTHQIIRENLNKSAMYGGMISGIGPRYCPSIEDKIVKFSEKPRHQIFVEPESYE 301 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 D +Y G ST++P ++Q + IR++PGLE I++ YAIEYD I+P +L+P+LE+K + Sbjct: 302 LDSMYLGGFSTSMPIDVQEKMIRSLPGLENCEILKYAYAIEYDAIDPTQLYPSLESKSVK 361 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 LF AGQINGT+GYEEAAAQGL+A IN +K + + R +YIGVMIDD+ +KGV+ Sbjct: 362 NLFFAGQINGTSGYEEAAAQGLMAAINVNQKYQNKEPVILGRDQAYIGVMIDDIVTKGVV 421 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAE+R++LR DNAD+RL IG ++G + + + + +Y+ ++ +L L Sbjct: 422 EPYRLLTSRAEHRLALRNDNADDRLMKIGFEIGLL---KPEVYDQYLNNLRQIKEILSWL 478 Query: 482 VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 T+ + F ++L P+ + +L CP + +I ++QI+ Sbjct: 479 KTTTVG-QIDDLKFTTLKTNSYLIDYLKRPEIKLNDLLIYCP-IKIEDEQIINKVQIQVK 536 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 + Y Q K++K + DY +P +S E +KL+ +KP +L QAS+I G+ Sbjct: 537 FEGYIKNQEENLKQLKRLNNIKLHGIVDYKEVPNISLETIDKLNKIKPLDLEQASRISGV 596 Query: 602 TPAALNLLLIYIKK 615 + ++ Y+++ Sbjct: 597 NLTDIAMIKYYLER 610 >gi|238853334|ref|ZP_04643714.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus gasseri 202-4] gi|205831544|sp|Q040F4|MNMG_LACGA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|238834022|gb|EEQ26279.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus gasseri 202-4] Length = 631 Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust. Identities = 258/618 (41%), Positives = 359/618 (58%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAG EAA AA++G T L+T + M CNP++GG KG +VREIDAL Sbjct: 9 YDVIVVGAGHAGVEAALAAARMGEKTLLLTINLDMVAFMPCNPSVGGPAKGTVVREIDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ DA IQ R+LN KGPAVR R QAD+ Y M+ I ++ NL + Q Sbjct: 69 GGEMGKNIDATYIQMRMLNTGKGPAVRALRAQADKWQYHEHMKDTIENEPNLTLRQAVAD 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E ++ + +VVLTTGT RG I IG+L +G PS L + Sbjct: 129 ELIVEDGACKGLITNTGAKYHAKSVVLTTGTAARGKIIIGELTYSSGPNNSLPSIKLPEN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 K F R KTGTP R+DG T+ + KT+++ D+ FS+ + Q+ C +T Sbjct: 189 LEKLGFKLRRFKTGTPPRVDGNTVDYSKTQEEPGDKEPRHFSYTSKDSDYLKDQMSCYMT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II N+ + ++SG IK GPRYCPSIEDK+VRF +++ HQIFLEPEG NT Sbjct: 249 YTNTVTHDIIRANLDRAPMFSGVIKGVGPRYCPSIEDKVVRFADKDRHQIFLEPEGRNTK 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y ST++PEE+Q + + ++ GLEK ++RPGYAIEYD I P +L TLETK I L Sbjct: 309 EIYVGDFSTSMPEEVQLKMLHSVAGLEKAELMRPGYAIEYDVIEPWQLKHTLETKNIKHL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ+NGT+GYEEAA QGL+AGIN+A + R ++YIGV+IDDL +KG EP Sbjct: 369 FTAGQMNGTSGYEEAAGQGLIAGINAALSAQNKPGFTLQRDEAYIGVLIDDLVTKGTNEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT G +LG I E R +F Q + + +K + + Sbjct: 429 YRLLTSRAEYRLLLRHDNADLRLTEKGHELGLISEERYAKFEAKKQAISRAMAAIKKVTI 488 Query: 484 -TSKNLSSTSISFKQD--GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + + S KQD + +FL P + + + V E+++I Sbjct: 489 HPTDEVQEYLASVKQDRLNAGVSGADFLKRPRVTFDAVEKLSGQTLATDRYVKEQVEIAL 548 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y ++ + E + IP D DY+++P+L+ E ++K ++P ++ QA +I G Sbjct: 549 KYEGYIKKEKTLVDRLHRLESKKIPVDIDYNAIPSLATEARQKFEKIRPESIAQAERISG 608 Query: 601 MTPAALNLLLIYIKKNTV 618 + PA L +L YI++ + Sbjct: 609 VNPADLAILTAYIQQGRI 626 >gi|325859685|ref|ZP_08172815.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prevotella denticola CRIS 18C-A] gi|325482611|gb|EGC85614.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prevotella denticola CRIS 18C-A] Length = 623 Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust. Identities = 255/622 (40%), Positives = 365/622 (58%), Gaps = 15/622 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+VIGGGHAGCEAA AA +GA T L+T + IG MSCNPA+GG+ KG +VREIDAL Sbjct: 5 YDVLVIGGGHAGCEAATAAANMGADTCLVTMDMNKIGQMSCNPAVGGIAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG V DA IQFR+LN KGPAV PR Q DR + ++ + ++LD+ Q + Sbjct: 65 GGYMGMVTDATAIQFRMLNRSKGPAVWSPRAQCDRGKFIWEWRKRLDHTDHLDIFQDQAD 124 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 TE + I + TV++T GTFL G++HIG+ K+ GR + + S Sbjct: 125 ELLTENGKVLGIKTIWGICLYAQTVIVTAGTFLNGLMHIGRRKVEGGRCAEPAVHHFTES 184 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + + R+KTGTP R+D +++ +D+ E Q + FSF Q+ C T Sbjct: 185 ITRHGIRSERMKTGTPVRIDRRSVHFDEMESQPGETDYHQFSFFGPHRQLPQLPCWTCNT 244 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N + H ++ + S +++G I+S GPRYCPSIE K+V F +++ H +FLEPEG +T+ + Sbjct: 245 NEQVHEVLRSGLADSPLFNGQIQSTGPRYCPSIETKLVTFPDKHSHPLFLEPEGTDTNEM 304 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG S+++P EIQ + I IP L I RPGYAIEYDY +P +L +LE+K I GLF Sbjct: 305 YLNGFSSSMPWEIQLEAIHRIPALRDAKIYRPGYAIEYDYFDPTQLKHSLESKVIDGLFF 364 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ+NGTTGYEEA QG VAGIN+A +R +SYIGV+IDDLT+KGV EPYR Sbjct: 365 AGQVNGTTGYEEAGGQGTVAGINAALLCAGKAPFVMNRDESYIGVLIDDLTTKGVDEPYR 424 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAEYRI LR D+AD RLT ++G R+ R+ ++Q+ + + TS Sbjct: 425 MFTSRAEYRILLRQDDADARLTEQAYEIGIA---RRDRYEWWLQKKANINRITDFCNNTS 481 Query: 486 KNLSSTSISFKQDGKTRTA-----YEFLSYPDFSIQNLFSICPDARKF-------SSLVI 533 + +Q G + + ++ P + +NL ++ P ++ + Sbjct: 482 VKPDVVNGLLEQLGTSPIKGAARITDLVARPQVNFKNLSAVVPALKEAIEASPNRQEEIA 541 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E +I+ Y Y R+ + A+++ E I FDY L LS E ++KL ++P L Sbjct: 542 EAAEIKLKYKGYIDRERVFAEKMHRLEDIKIKGYFDYGRLHDLSTECRQKLERIQPETLA 601 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I G++P+ +N+LL+ + + Sbjct: 602 QASRIPGVSPSDINVLLVLMGR 623 >gi|320581620|gb|EFW95840.1| Mitochondrial protein, forms a heterodimer complex with Mss1p [Pichia angusta DL-1] Length = 797 Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust. Identities = 253/606 (41%), Positives = 362/606 (59%), Gaps = 40/606 (6%) Query: 19 EAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGI 78 EAAA +A+ G T L+T S I E+DALDG+ RV D +GI Sbjct: 49 EAAAGSARTGVFTTLVTPDISKI-------------------EVDALDGIAPRVVDMSGI 89 Query: 79 QFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGF----------- 127 QF+VLN +G AV G R Q DR+LY MQ+ + NL+++Q V Sbjct: 90 QFKVLNRSRGAAVWGHRAQIDRKLYLTEMQKLLKDYPNLNILQARVEDLVVVPFTNESGD 149 Query: 128 -NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSF 186 N+ I +V+ D ++RC VV+TTGTFL IH+G PAGR+G+ PS L +F Sbjct: 150 KNSYDAKICGVVLSDGEILRCEKVVITTGTFLSAEIHLGLDTWPAGRIGEDPSYGLSKTF 209 Query: 187 MKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KITNRQIECGITR 244 + F GRLKTGTP R+ KT+ + K ++ D P SF+ + KI + Q+ C T Sbjct: 210 REAGFRLGRLKTGTPPRISAKTVDYSKVAEEPGDNPPEPMSFLNEIPKIED-QLLCYSTY 268 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T H++I+ N+ S +K GPRYCPSIE K++RF ++ H+++LEPEGL+TDV Sbjct: 269 TTPAMHKLILSNLDKSVHIRETVK--GPRYCPSIESKLIRFSDKTRHRVWLEPEGLDTDV 326 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIS +P EIQ ++ I GLE+V +++PGY +EYDYI+P+ L TLETK ISGL+ Sbjct: 327 MYPNGISCTMPPEIQEAMLKNIIGLEEVKMLQPGYGVEYDYIDPRGLKRTLETKTISGLY 386 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEAAAQG+VAGIN+ + R+D YIG++IDDL +KGV EPY Sbjct: 387 LAGQINGTTGYEEAAAQGIVAGINAGLGFQNKKPLILDRSDGYIGILIDDLITKGVEEPY 446 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSR+E+RIS+R DNAD RLTP G +LGC+ +R F + + Y LK L Sbjct: 447 RMFTSRSEFRISVRADNADLRLTPKGHELGCVSAQRWDHFTEENKLYQESLDFLKDYKLP 506 Query: 485 SKNLSS--TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA--RKFSSLVIERLQIES 540 S+ + + + D ++A++ L Y + S+ +L + + + +++ I Sbjct: 507 SQEWAKLVPRLKIRTDSSYKSAFDLLRYENMSLDDLIPVLHNKSLEALPRKIKQKIDIHG 566 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y GR+ + + K +E ++P +FDY+S+ +LS+E + L+ KP + QA +I+G Sbjct: 567 DYQGYLGRENAQIRAFKSDENLVLPTNFDYTSMSSLSSEARALLNESKPETIGQARRIQG 626 Query: 601 MTPAAL 606 +TPAA+ Sbjct: 627 ITPAAI 632 >gi|167999482|ref|XP_001752446.1| predicted protein [Physcomitrella patens subsp. patens] gi|162696346|gb|EDQ82685.1| predicted protein [Physcomitrella patens subsp. patens] Length = 682 Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust. Identities = 262/623 (42%), Positives = 376/623 (60%), Gaps = 16/623 (2%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 + +DVIV+GGGHAGCEAA AA++GA T L+T I CNPA+GG K LV E+ Sbjct: 23 DERFDVIVVGGGHAGCEAALAAARMGAQTLLLTLNLDRIAWQPCNPAVGGPAKSQLVHEV 82 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G +GR+AD +Q RVLN KGPAV R Q D+ Y L M++ I + +NL + + Sbjct: 83 DALGGEIGRMADRCYLQKRVLNRSKGPAVWALRAQTDKREYALEMKKIIENTKNLQIREA 142 Query: 123 EV----AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSP 178 V G N + + + D +VVLTTGTF+ G I +G+ + AGR G+S Sbjct: 143 MVTEILVGNNDDVTGVRTFFGVD---FIAPSVVLTTGTFMNGKIWVGRSSMSAGRAGESA 199 Query: 179 SNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD---KITN 235 S L + F F+T RLKTGTPAR+D +++ + E Q DE + FS D I Sbjct: 200 SEGLTENLQNFGFETDRLKTGTPARVDVRSVDFSVMEAQPGDEDVRWFS--NDPLVHIER 257 Query: 236 RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFL 295 Q+ C +TRT TH++I +N+ + Y G +++ GPRYCPSIEDKIVRF ++ HQIFL Sbjct: 258 EQMSCYLTRTTPATHKMINDNLHETPTYGGWVEAKGPRYCPSIEDKIVRFKDKETHQIFL 317 Query: 296 EPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTL 355 EPEG + +Y G ST LPE +Q +RT+PGLEK ++RP YA+EYDY+ + +L Sbjct: 318 EPEGRDVPELYVQGFSTGLPERLQLALLRTLPGLEKCTMLRPAYAVEYDYLPAHQCHRSL 377 Query: 356 ETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDL 415 TKK+ GLF +GQINGTTGYEEAAAQGLVAG+N+A +++ + R S+IG +IDDL Sbjct: 378 MTKKLEGLFFSGQINGTTGYEEAAAQGLVAGVNAALRADGKSLLVLERESSFIGTLIDDL 437 Query: 416 TSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFA-KYIQEYNFL 474 +K + EPYRM TSR+E+R+ LR DNAD+RLTP+G LG + +R F K I+ + Sbjct: 438 VTKDLREPYRMLTSRSEHRLLLRADNADSRLTPLGRDLGLVDDRMWNLFQDKQIRIASEK 497 Query: 475 RSLLKSLVLTSKNLSSTSISFKQDG--KTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV 532 L + V ++ ++ G +T L P L + + +S+ Sbjct: 498 NRLQTTKVTPNEKIAEEVAQVSGQGIKETVALATILKRPHVHYSVLENHGYGNSELTSME 557 Query: 533 IERLQIESSYAAYTGRQMIE-AKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 E ++I+ YA + RQ + +++ ++ + IP D DY+S+ +S E +EKL+ ++P N Sbjct: 558 KECVEIDIKYAGFIMRQQGQLEQQMVHKQHKAIPDDLDYNSISTISMEAREKLTKIRPQN 617 Query: 592 LLQASKIEGMTPAALNLLLIYIK 614 + QAS+I G+ PA + LLI+++ Sbjct: 618 IGQASRIGGVNPADITALLIHLE 640 >gi|257463656|ref|ZP_05628047.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Fusobacterium sp. D12] gi|317061206|ref|ZP_07925691.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG 2 [Fusobacterium sp. D12] gi|313686882|gb|EFS23717.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG 2 [Fusobacterium sp. D12] Length = 630 Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust. Identities = 271/629 (43%), Positives = 383/629 (60%), Gaps = 23/629 (3%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DVIV+G GHAG EAA AA+LG TA+ T IG MSCNP++GG K HLVREID Sbjct: 3 QEFDVIVVGAGHAGAEAALAAARLGKKTAIFTISLDNIGVMSCNPSLGGPAKSHLVREID 62 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G MGR D IQ RVLN KKGPAVR R QAD+ Y M+R I S ENL IQG Sbjct: 63 ALGGEMGRNIDKTYIQIRVLNTKKGPAVRSLRAQADKIAYAKEMKRTIESCENLSAIQGM 122 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V+ E I +++ R ++L TGTFLRG+IHIG+ GRMG+ S L Sbjct: 123 VSELLVENGKAVGIKIREGVEYRAKRIILATGTFLRGLIHIGESHFSGGRMGELSSEELP 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADE-RLIPFSFMT---DKITNRQIE 239 S +K D R KTGTP+R+D ++I + E+Q ++ R++ FS T D +QI Sbjct: 183 LSLLKHGLDLQRFKTGTPSRIDARSIDFSVLEEQPGEKSRILKFSNRTKEEDLKDRKQIS 242 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C I TN H I +N + S +++G I+ GPRYCPSIEDK+ R+ ++ H +FLE EG Sbjct: 243 CYIAHTNEAVHEEIKKNRERSPLFNGTIQGLGPRYCPSIEDKVYRYADKQQHHLFLEREG 302 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 T+ +Y G+S++LP ++Q I I G E I+R GYAIEYDYI P E+ +LE++ Sbjct: 303 YETNEIYLGGLSSSLPVDVQENMIHQIRGFEHAQIMRYGYAIEYDYIPPSEIQYSLESRS 362 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I LFLAGQINGT+GYEEA AQGL+AGIN+ R + + I R DSYIG +IDDL KG Sbjct: 363 IPNLFLAGQINGTSGYEEAGAQGLIAGINAVRSIDGKEAIVLDRADSYIGTLIDDLVLKG 422 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFT+R+EYR+ LR DNAD RL+ IG ++G + E + + K Q+ ++ +++ Sbjct: 423 TNEPYRMFTARSEYRLLLREDNADLRLSKIGYEVGLVSE---EEYQKVEQKRENVKKIIE 479 Query: 480 SLVL---------TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS 530 +L ++ L +DG + +E L P+ + +++ + + + F+ Sbjct: 480 ALQQNFVGPGNPRVNERLHEKGEQILKDGA--SLFEVLRRPEINYEDIEYMTEETKVFNF 537 Query: 531 LVIE-----RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 + ++++++ Y+ Y R + ++ K E++ IP+D DY SL + E KEKL Sbjct: 538 GAYDEDTKYQVEVQTKYSGYIERSLKMIEKHKSMEQKRIPEDMDYDSLQNIPKEAKEKLK 597 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYIK 614 +KP N+ QAS+I G++PA + +LLIY+K Sbjct: 598 KIKPSNIGQASRISGVSPADIQVLLIYLK 626 >gi|19112323|ref|NP_595531.1| mitochondrial tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Schizosaccharomyces pombe 972h-] gi|3915337|sp|O13670|MTO1_SCHPO RecName: Full=Protein MTO1 homolog, mitochondrial; Flags: Precursor gi|2257569|dbj|BAA21461.1| HYPOTHETICAL 75.4KD PROTEIN IN HAP2-ADE 5,6 INTERGENIC REGION [Schizosaccharomyces pombe] gi|3417432|emb|CAA20319.1| mitochondrial tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Schizosaccharomyces pombe] Length = 666 Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust. Identities = 275/631 (43%), Positives = 383/631 (60%), Gaps = 17/631 (2%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 NR +V+VIGGGHAG EAAA A++LGA T L+T IG MSCNPA GG+GKG L+REI Sbjct: 14 NRRKNVVVIGGGHAGVEAAAAASRLGAKTTLLTKSFDNIGQMSCNPAFGGIGKGTLMREI 73 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILS-QENLDVIQ 121 DAL G++ V D + IQF +LN GPAV PR Q DR +++ MQ+ I + ++NL V + Sbjct: 74 DALGGVVSGVCDESAIQFHMLNRSNGPAVWSPRAQMDRSVFKKNMQKTISTYRKNLQVRE 133 Query: 122 GEVAGFN--TE---KNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGD 176 G N TE K + SIV++D + I S +V+TTGTFL G I++G ++ AGR G+ Sbjct: 134 GAAVSINVLTEDDGKQVCDSIVLEDGTAIPASCIVITTGTFLGGQINVGLTQLAAGRYGE 193 Query: 177 SPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK---- 232 PS L F GRLKTGTP RL I TE Q DE FSF+ + Sbjct: 194 RPSLPLSKCLSNLGFKMGRLKTGTPPRLSSPINISKMTE-QTGDEIPETFSFLNLERDFS 252 Query: 233 ITNRQIECGITRTNLETHRIIMENIKHSA-IYSGDIKSYGPRYCPSIEDKIVRFGERNGH 291 Q C T T TH I+ +N+ + + +GDI S PRYCPS+E K+ RF + H Sbjct: 253 PALPQRSCYRTYTTELTHEIVRKNLAFAPHMLAGDILS--PRYCPSLEAKVTRFPHKARH 310 Query: 292 QIFLEPEGLNTD-VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKE 350 I+LEPEGL+ + YPNG+S ++PEEIQH IR+IPGLE NI+RP Y + YDY+ P + Sbjct: 311 LIWLEPEGLDPNSWWYPNGLSNSMPEEIQHNIIRSIPGLENCNIVRPAYGVMYDYVIPTQ 370 Query: 351 LFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGV 410 L TLETKKI GL+LAGQINGTTGYEEAAAQG++AG+N+ + + + R + +GV Sbjct: 371 LKATLETKKIQGLYLAGQINGTTGYEEAAAQGILAGLNAGLSALGREPVDIPRNTALLGV 430 Query: 411 MIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGER-RQKRFAKYIQ 469 M+DDL +KGV EPYR+FTSR+EYR++ R DNAD RLTP+ +G + ++ + F + Sbjct: 431 MVDDLITKGVKEPYRVFTSRSEYRLTTRADNADLRLTPLAQSIGLLDDQTHWESFQRTKS 490 Query: 470 EYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFS 529 +F + K +L+ + S + DGK R+A++ LS+ + + + S P + Sbjct: 491 LLDFSNKIAKEFILSPQQWSKLGMPIPNDGKYRSAWDLLSFTNLDLFCVISCIPKLKDIP 550 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKF-EEKRLIPKDFDYSSLPALSNELKEKLSILK 588 V++RL IE Y Y RQ + K++ +E +IP DFD+ +L ++S E L ++ Sbjct: 551 KRVLQRLIIEGKYTYYIKRQGTQNKQLNCRDESTVIPSDFDFDTLHSVSAEELMLLKTIR 610 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 P + Q +I+G+ P + LL + N K Sbjct: 611 PATIGQLKRIQGIKPGTIIRLLRHTYYNPAK 641 >gi|293368669|ref|ZP_06615276.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides ovatus SD CMC 3f] gi|292636311|gb|EFF54796.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides ovatus SD CMC 3f] Length = 628 Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust. Identities = 272/623 (43%), Positives = 376/623 (60%), Gaps = 20/623 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAGCEAAA AA LG+ T LIT + IG MSCNPA+GG+ KG +VREIDAL Sbjct: 5 YDVIVIGAGHAGCEAAAAAANLGSKTCLITMDMNKIGQMSCNPAVGGIAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG V D IQFR+LN KGPA+ PR Q DR + + + ++ + NL + Q V Sbjct: 65 GGQMGLVTDETAIQFRILNRSKGPAMWSPRAQCDRAKFIWSWREKLENTPNLHIWQDTVC 124 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E ++ +V + +VLT GTFL G++H+G+ K+P GRM + S L S Sbjct: 125 ELLVENGEVTGLVTAWGVTFKAKCIVLTAGTFLNGLMHVGRHKLPGGRMAEPASYQLTES 184 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GR+KTGTP R+D +++ +D+ E Q + FSFM + +Q++C Sbjct: 185 IARHGISYGRMKTGTPVRIDARSVHFDQMETQDGESDFHKFSFMNTSTHHLKQLQCWTCY 244 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN E HRI+ E + S +++G I+S GPRYCPSIE KIV F +++ HQ+FLEPEG T Sbjct: 245 TNEEVHRILREGLPDSPLFNGQIQSIGPRYCPSIETKIVTFPDKDQHQLFLEPEGETTQE 304 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y NG S++LP EIQ ++ IP + + I RPGYAIEYDY +P +L TLE+K I LF Sbjct: 305 LYLNGFSSSLPMEIQIAALKQIPAFKDLVIYRPGYAIEYDYFDPTQLKHTLESKIIKNLF 364 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ+NGTTGYEEA QGL+AGIN+ + + +R ++YIGV+IDDL +KGV EPY Sbjct: 365 FAGQVNGTTGYEEAGGQGLIAGINAHINCHGGEAFTLARDEAYIGVLIDDLVTKGVDEPY 424 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQK--RFAKYIQEY--NFLRSLLKS 480 RMFTSRAEYRI LR D+AD RLT KLG E R + R K E +F R+ Sbjct: 425 RMFTSRAEYRILLRMDDADMRLTEKAFKLGLAKEDRYQLVRGKKEAVEQIISFARNYSMK 484 Query: 481 LVLTSKNLSST-SISFKQDGKTRTAYEFLSYPDFSIQNLFSICP----DARKFSSL---- 531 L + L + S +Q K E L+ P +I+N+ P + K +S Sbjct: 485 PALINDALEKIGTTSLRQGCKL---IEILNRPQVTIENIAEYVPAFQRELEKATSSDQDR 541 Query: 532 ---VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 ++E +I Y Y R+ + A+++ E I FDYS++ +LS E ++KL+ + Sbjct: 542 KEEILEAAEILIKYQGYIDRERMIAEKLARLESIKIKGKFDYSTIQSLSTEARQKLAKIN 601 Query: 589 PFNLLQASKIEGMTPAALNLLLI 611 P + QAS+I G++P+ +N+LL+ Sbjct: 602 PETIAQASRIPGVSPSDINVLLV 624 >gi|160916053|ref|ZP_02078260.1| hypothetical protein EUBDOL_02080 [Eubacterium dolichum DSM 3991] gi|158431777|gb|EDP10066.1| hypothetical protein EUBDOL_02080 [Eubacterium dolichum DSM 3991] Length = 619 Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust. Identities = 253/620 (40%), Positives = 367/620 (59%), Gaps = 11/620 (1%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALD 66 DVIVIGGGHAG EAA A++ T L + I SM CNP++GG KG +VREIDAL Sbjct: 3 DVIVIGGGHAGVEAALACARMKKKTLLYSMNIDMIASMPCNPSVGGPAKGIVVREIDALG 62 Query: 67 GLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAG 126 G MG+ ADA +QF++LN KGP V+ R Q+D+ Y+ MQ +LS ENL+V + V Sbjct: 63 GEMGKAADATALQFKMLNTNKGPGVQCLRVQSDKLAYKKYMQDVVLSCENLEVREMCVEK 122 Query: 127 FNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSF 186 E + ++ +D V++T+GT++ I +G P+G + +N+L S Sbjct: 123 VLAENGKVKGVLQKDGHEEYSQAVIVTSGTYMSSCILVGHTSTPSGPDQEPTTNALSQSL 182 Query: 187 MKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--NRQIECGITR 244 T RLKTGTPAR+ +I + KTE Q + + FS T I ++Q C +T Sbjct: 183 RDLGITTFRLKTGTPARVKTSSIDFSKTEVQPGSDAFLAFSTETKSIRPFDKQALCYLTY 242 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH+II +N+ SA+YSG +K GPRYCPSIEDK+VRF ++ HQIFLEPE D Sbjct: 243 TNAKTHQIIRDNLDKSAMYSGLVKGVGPRYCPSIEDKLVRFADKERHQIFLEPESEQLDT 302 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 Y G ST++P ++Q + ++ GLE I + YAIEYD I+P + PTLE K + L+ Sbjct: 303 TYIQGFSTSMPHDVQEDMLHSLAGLEHCEIEKYAYAIEYDAIDPLQCKPTLENKLVENLY 362 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+ K + + R ++YIGV+IDDL +KG EPY Sbjct: 363 TAGQINGTSGYEEAAGQGLMAGINACLKLDHKAPLILHRDEAYIGVLIDDLVTKGTQEPY 422 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RL G +LG I E R R+ + +++ ++ L+++ T Sbjct: 423 RLLTSRAEYRLLLRHDNADQRLMRYGHELGLISEERYARYKQKLKDIEDTKAYLETVRFT 482 Query: 485 SKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 K S ++ K +G +A E L P+ ++ L RK + V +L+I+ Sbjct: 483 PK--SEINMFLKANGYDELKEGVSARELLKRPNVTMYMLMPYLD--RKVDAEVSRQLEID 538 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + +AK ++ + ++P D Y + LS E ++KL+ + P + QAS+I Sbjct: 539 IKYEGYILKAKRDAKHLRDMDNVVLPTDICYDEVANLSLEARQKLAKVMPLTMGQASRIS 598 Query: 600 GMTPAALNLLLIYIKKNTVK 619 G+ PA + +L +Y+++ K Sbjct: 599 GVNPADIAVLAVYLEQRKRK 618 >gi|256819913|ref|YP_003141192.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Capnocytophaga ochracea DSM 7271] gi|256581496|gb|ACU92631.1| glucose inhibited division protein A [Capnocytophaga ochracea DSM 7271] Length = 623 Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust. Identities = 274/626 (43%), Positives = 379/626 (60%), Gaps = 14/626 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M YDVIV+GGGHAG EAAA AA +GAST LIT I MSCNPA+GG+ KG +VR Sbjct: 1 MFTTEYDVIVVGGGHAGAEAAAAAANMGASTLLITMNLQHIAQMSCNPAVGGIAKGQIVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G MG + D IQF++LN KGPA+ PR Q+DR + A + ++ S LD Sbjct: 61 EIDALGGYMGIITDKTAIQFKMLNQSKGPAMWSPRAQSDRMRFSEAWRLQLESLPTLDFF 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 QG V EK+ + + I+ +VVLT GTFL GV+HIG + GR G+ + Sbjct: 121 QGMVNDLLIEKDKVVGVRTSLGITIKAKSVVLTNGTFLNGVMHIGMKQFGGGRAGEPAAY 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIE 239 + ++ F+ GR+KTGTP R+D +++ + K Q DE FSF + + Q + Sbjct: 181 GITECLVQHGFEAGRMKTGTPPRVDARSLDFSKMIPQPGDEHPQKFSFSAETQPLAVQKD 240 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +T T+ H I+ S ++ G I GPRYCPSIEDKI RF +++ HQ+F+EPEG Sbjct: 241 CYMTYTSERVHNILRTGFDRSPMFQGIIHGVGPRYCPSIEDKINRFADKDHHQLFVEPEG 300 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 +T +Y NG ST+LPEE+Q+ + + G EKV RPGYAIEYDY P +L TLETK Sbjct: 301 WHTVEMYVNGFSTSLPEEVQYAALSQVAGFEKVKFFRPGYAIEYDYFPPTQLKHTLETKL 360 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I L+ AGQINGTTGYEEAAAQGL+AG+N+ K + R ++YIGV+IDDL +KG Sbjct: 361 IENLYFAGQINGTTGYEEAAAQGLMAGVNAVLKIRERAPFVLKRDEAYIGVLIDDLITKG 420 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR LR DNAD RLTP+G ++G + E R + + ++ + + +K Sbjct: 421 TEEPYRMFTSRAEYRTLLRQDNADRRLTPLGYEIGTVSEARYRAWEAKERKVSAFITYIK 480 Query: 480 SLVLTSKNLSS-----TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDAR--KFSSLV 532 L +T + ++ S KQ K + + LS PD ++ + +I A K + L Sbjct: 481 ELSVTPEEVNPILEKYESSPMKQGDKFQ---KVLSRPDVTLADFEAIDRIAEYIKNNELT 537 Query: 533 IER---LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 E ++E YA Y ++ A ++ E IP +FDY + +LS E +EKL ++P Sbjct: 538 EEEKTCAEVEVKYAGYIEKERNNADKLNRLESVRIPDNFDYDKIVSLSFEGREKLKKIRP 597 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKK 615 L QAS+I G++PA +++LLIY+ + Sbjct: 598 VTLSQASRISGVSPADISILLIYMGR 623 >gi|299145227|ref|ZP_07038295.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides sp. 3_1_23] gi|298515718|gb|EFI39599.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides sp. 3_1_23] Length = 628 Score = 469 bits (1207), Expect = e-130, Method: Compositional matrix adjust. Identities = 272/623 (43%), Positives = 375/623 (60%), Gaps = 20/623 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAGCEAAA AA LG+ T LIT + IG MSCNPA+GG+ KG +VREIDAL Sbjct: 5 YDVIVIGAGHAGCEAAAAAANLGSKTCLITMDMNKIGQMSCNPAVGGIAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG V D IQFR+LN KGPA+ PR Q DR + + + ++ + NL + Q V Sbjct: 65 GGQMGLVTDETAIQFRILNRSKGPAMWSPRAQCDRAKFIWSWREKLENTPNLHIWQDTVC 124 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E ++ +V + +VLTTGTFL G++H+G K+P GRM + S L S Sbjct: 125 ELLVENGEVTGLVTAWGVTFKAKCIVLTTGTFLNGLMHVGHHKLPGGRMAEPASYQLTES 184 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GR+KTGTP R+D +++ +D+ E Q + FSFM + +Q++C Sbjct: 185 IARHGISYGRMKTGTPVRIDARSVHFDQMETQDGESDFHKFSFMNTSTHHLKQLQCWTCY 244 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN E HRI+ E + S +++G I+S GPRYCPSIE KIV F +++ HQ+FLEPEG T Sbjct: 245 TNEEVHRILREGLPDSPLFNGQIQSIGPRYCPSIETKIVTFPDKDQHQLFLEPEGETTQE 304 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y NG S++LP EIQ ++ IP + + I RPGYAIEYDY +P +L TLE+K I LF Sbjct: 305 LYLNGFSSSLPMEIQIAALKQIPAFKDLVIYRPGYAIEYDYFDPTQLKHTLESKIIKNLF 364 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ+NGTTGYEEA QGL+AGIN+ + + +R ++YIGV+IDDL +KGV EPY Sbjct: 365 FAGQVNGTTGYEEAGGQGLIAGINAHINCHGGETFTLARDEAYIGVLIDDLVTKGVDEPY 424 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQK--RFAKYIQEY--NFLRSLLKS 480 RMFTSRAEYRI LR D+AD RLT KLG E R + R K E +F R+ Sbjct: 425 RMFTSRAEYRILLRMDDADMRLTEKAFKLGLAKEDRYQLVRSKKEAVEQIISFARNYSMK 484 Query: 481 LVLTSKNLSSTSIS-FKQDGKTRTAYEFLSYPDFSIQNLFSICP----DARKFSSL---- 531 L + L + +Q K E L+ P +I+N+ P + K +S Sbjct: 485 PALINDALEKIGTTPLRQGCKL---IEILNRPQVTIENIAEYVPAFQRELEKATSSDQDR 541 Query: 532 ---VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 ++E +I Y Y R+ + A+++ E I FDYS++ +LS E ++KL+ + Sbjct: 542 KEEILEAAEILIKYQGYIDRERMIAEKLARLESIKIKGKFDYSTIQSLSTEARQKLAKID 601 Query: 589 PFNLLQASKIEGMTPAALNLLLI 611 P + QAS+I G++P+ +N+LL+ Sbjct: 602 PETIAQASRIPGVSPSDINVLLV 624 >gi|197294686|ref|YP_001799227.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Candidatus Phytoplasma australiense] gi|171854013|emb|CAM11978.1| Glucose inhibited division protein A [Candidatus Phytoplasma australiense] Length = 614 Score = 469 bits (1207), Expect = e-130, Method: Compositional matrix adjust. Identities = 258/616 (41%), Positives = 369/616 (59%), Gaps = 15/616 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD IV+G GHAG EAA + AK T LI+ I S+ CNP+IGG KG +VREIDAL Sbjct: 3 YDSIVVGAGHAGVEAALILAK-KHQTLLISGSLKKIASLHCNPSIGGPAKGVVVREIDAL 61 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+MG+ AD A IQ ++LN KGPAVR R Q D+ Y + + + + NLD+++G V Sbjct: 62 GGVMGKAADLAQIQMKMLNFSKGPAVRALRAQIDKIQYPKIILKMLQTAPNLDLLEGLVN 121 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + N I + + D I TV++TTGT+L I IG+ K +G G + + Sbjct: 122 HLLIKNNQIQGVCLLDGRKIYAKTVIITTGTYLSSQILIGETKTASGPNGTPTTYGISQQ 181 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGITR 244 F+ RLKTGTP R+ TI + +T+ Q D L FSF +D K Q C +T Sbjct: 182 LKDLGFEIIRLKTGTPPRIKKATIDYAQTKIQLGDTDLQTFSFDSDIKKLGSQEACFLTH 241 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH++I +++ SA+Y G IK GPRYCPSIEDK+VRF ++ HQIF+EPE ++ D Sbjct: 242 TNEKTHQVIQKHLNKSAMYGGYIKGTGPRYCPSIEDKVVRFFDKKSHQIFIEPESVSLDE 301 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+ST++P+ IQH+ ++TIPGL+ I + GYAIEYD NP +L LETKKI+ LF Sbjct: 302 MYLQGLSTSMPQNIQHEILKTIPGLQNAEIAKYGYAIEYDAFNPSQLKHNLETKKINNLF 361 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ+NGT+GYEEAA QGL+AGIN++ K R ++YIGV+IDDL +KG EPY Sbjct: 362 FAGQMNGTSGYEEAACQGLMAGINASLKLQNKSPFVLKRNEAYIGVLIDDLITKGTKEPY 421 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAE+R+ LR DNAD RL G I + + F K + + + ++ + Sbjct: 422 RLLTSRAEFRLLLRHDNADLRLKEYSNHFGLIDAKNYEAFKKKKESLQLILKMSQNHEIL 481 Query: 485 S--KNLSSTSISFKQDGKTRTAYEFLSYPDF---SIQNLFSICPDARKFSSLVIERLQIE 539 S KNL + T ++ L P+F ++Q+ I D + + E+ +I+ Sbjct: 482 SEEKNLDYLKTTLT---GKTTLFQLLKRPEFNYQTLQHFLKIKADQKTY-----EQAEIQ 533 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + EA+++ E++ IP+ +YS + LS E +EKL+++KP L QAS+I Sbjct: 534 IKYEGYIAKAKKEAEKLLKLEQKKIPEKINYSEIKNLSKEAQEKLTLIKPETLGQASRIL 593 Query: 600 GMTPAALNLLLIYIKK 615 G+ +++LLIY+ K Sbjct: 594 GVNQVDISILLIYLGK 609 >gi|315225301|ref|ZP_07867118.1| glucose inhibited division protein A [Capnocytophaga ochracea F0287] gi|314944984|gb|EFS97016.1| glucose inhibited division protein A [Capnocytophaga ochracea F0287] Length = 623 Score = 469 bits (1206), Expect = e-130, Method: Compositional matrix adjust. Identities = 273/626 (43%), Positives = 380/626 (60%), Gaps = 14/626 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M YDVIV+GGGHAG EAAA AA +GAST LIT I MSCNPA+GG+ KG +VR Sbjct: 1 MFTTEYDVIVVGGGHAGAEAAAAAANMGASTLLITMNLQHIAQMSCNPAVGGIAKGQIVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G MG + D IQF++LN KGPA+ PR Q+DR + A + ++ S LD Sbjct: 61 EIDALGGYMGIITDKTAIQFKMLNQSKGPAMWSPRAQSDRMRFSEAWRLQLESLPTLDFF 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 QG V EK+ + + I+ +VVLT GTFL GV+HIG + GR G+ + Sbjct: 121 QGMVNDLLIEKDKVVGVRTSLGITIKAKSVVLTNGTFLNGVMHIGLKQFGGGRAGEPAAY 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIE 239 + ++ F+ GR+KTGTP R+D +++ + K Q DE+ FSF + + Q + Sbjct: 181 GITECLVQHGFEAGRMKTGTPPRVDARSLDFSKMIPQPGDEQPQKFSFSAETQPLAVQKD 240 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +T T+ H I+ S ++ G I GPRYCPSIEDKI RF +++ HQ+F+EPEG Sbjct: 241 CYMTYTSERVHNILRTGFDRSPMFQGIIHGVGPRYCPSIEDKINRFADKDHHQLFVEPEG 300 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 +T +Y NG ST+LPEE+Q+ + + G EKV RPGYAIEYDY P +L TLETK Sbjct: 301 WHTVEMYVNGFSTSLPEEVQYAALSQVAGFEKVKFFRPGYAIEYDYFPPTQLKHTLETKL 360 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I L+ AGQINGTTGYEEAAAQGL+AG+N+ K + R ++YIGV+IDDL +KG Sbjct: 361 IENLYFAGQINGTTGYEEAAAQGLMAGVNAVLKIRERAPFVLKRDEAYIGVLIDDLITKG 420 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR LR DNAD RLTP+G ++G + E R + + ++ + + +K Sbjct: 421 TEEPYRMFTSRAEYRTLLRQDNADRRLTPLGYEIGTVSEARYRAWEAKERKVSGFITYIK 480 Query: 480 SLVLTSKNLSS-----TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDAR--KFSSLV 532 L +T + ++ S +Q K + + LS PD ++ + +I A K + L Sbjct: 481 ELSVTPEEVNPILEKYESSPMRQGDKLQ---KVLSRPDVTLADFETIDRIAEYIKKNELT 537 Query: 533 IER---LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 E ++E YA Y ++ A ++ E IP +FDY + +LS E +EKL ++P Sbjct: 538 EEEKTCAEVEVKYAGYIEKERNNADKLNRLESMRIPDNFDYDKIVSLSFEGREKLKKIRP 597 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKK 615 L QAS+I G++PA +++LLIY+ + Sbjct: 598 VTLSQASRISGVSPADISILLIYMGR 623 >gi|294101019|ref|YP_003552877.1| glucose inhibited division protein A [Aminobacterium colombiense DSM 12261] gi|293615999|gb|ADE56153.1| glucose inhibited division protein A [Aminobacterium colombiense DSM 12261] Length = 632 Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust. Identities = 260/619 (42%), Positives = 353/619 (57%), Gaps = 6/619 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M + YDVIV+GGGHAGCEA+ AA++GA T ++ M CNP+IGG KGHLVR Sbjct: 1 MEQKKYDVIVVGGGHAGCEASLAAARMGARTLMLNLYLDNTALMPCNPSIGGPAKGHLVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E +AL G R AD + + R LN KGPAV+ R Q D Y I + NL+V Sbjct: 61 EGNALGGEQARAADYSTMLVRWLNTSKGPAVQALRAQCDLRDYHDHFIWTIETTPNLEVH 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E I + + V+LTTGT+LRG +HIG L +G MG PS Sbjct: 121 QDIVTDLWIENGSIRGVKTKYGFTYEAGAVILTTGTYLRGQVHIGLLNYSSGPMGQVPST 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 L S ++ + GR++T T RL TI +Q + E + F +K T C Sbjct: 181 ELSRSLLESGIEMGRMRTDTTPRLHIDTIDTSSLIEQKSAEEPLCFDLWGEKKTYTGYSC 240 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +TRTN H II EN++ S +++G + GPRYCPSIEDKI+RF +++ H IFLEP Sbjct: 241 YLTRTNSYLHNIIRENLERSPLWTGRMSGLGPRYCPSIEDKIIRFPDKDSHLIFLEPVSR 300 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 VY ST+LP +IQ + + +PG EK I R GYAIEYDY+ P +L P+LETK I Sbjct: 301 KNKEVYVQNFSTSLPYDIQVEIVHALPGCEKAQITRAGYAIEYDYVIPTQLAPSLETKNI 360 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQINGT+GYEEAAAQGL+AG+N+ + K + R+D+YIGV+IDDL +KG Sbjct: 361 RGLFCAGQINGTSGYEEAAAQGLIAGMNAVLYTRKEAPVVLKRSDAYIGVLIDDLVTKGT 420 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR----QKRFAKYIQEYNFLRS 476 EPYRM TSR EYR+ LR DNAD RL PIG ++G I + + ++++A E L + Sbjct: 421 NEPYRMLTSRCEYRLLLRFDNADRRLAPIGRRMGLIDDVKWQILREKWAAVDHEKERLSN 480 Query: 477 LLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPD-ARKFSSLVIER 535 L + + + S + R A + L P+ + + P R + + Sbjct: 481 LRINPSEEVNDWLVRAGSSPLEESVR-AIDLLCRPEVTYGAMRPFLPSIERPLTDEEAQS 539 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 L IE YA Y RQ + + EK IP+DF Y +P L +E ++KL ++P NL QA Sbjct: 540 LAIEVKYAGYIERQQRQVIRLSKGEKVYIPEDFSYDEVPGLLSESRQKLEKIRPQNLAQA 599 Query: 596 SKIEGMTPAALNLLLIYIK 614 S+I G+TPA + LL +Y++ Sbjct: 600 SRISGVTPADIQLLSVYLE 618 >gi|309791316|ref|ZP_07685839.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Oscillochloris trichoides DG6] gi|308226626|gb|EFO80331.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Oscillochloris trichoides DG6] Length = 677 Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust. Identities = 267/649 (41%), Positives = 367/649 (56%), Gaps = 41/649 (6%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IV+G GHAGCEAA AA++G T L+T IG M CNP+IGG KGHLVREIDAL Sbjct: 33 YDIIVVGAGHAGCEAANAAARMGCRTLLLTIDLDKIGYMPCNPSIGGPAKGHLVREIDAL 92 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM RV D + IQ RVLN KGPAV+ R QAD+ Y M+ + NLDV Q V Sbjct: 93 GGLMARVTDQSAIQIRVLNESKGPAVQSLRAQADKRHYAQVMKETLEQVPNLDVRQAMVE 152 Query: 126 GFNTEKNIISSIVMQDNSMIRCST--------VVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 + S + ++ T +VLT GTFLRG + G+ PAGR G++ Sbjct: 153 QIRMLAAEVDSDLTPYAFQVQTHTGYTYQARALVLTVGTFLRGRVITGEATWPAGRAGEA 212 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQ-----------FADERLIPF 226 P+ +L + F RLKTGTP R+ +I + +T+ Q + + +P Sbjct: 213 PAVALGENLAALGFPLVRLKTGTPPRVHAASIDFSQTDIQQGSRVPVAFGHYGPQERLPN 272 Query: 227 SFMTDKIT----------NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCP 276 F Q+ C + T + H II +N+ + ++SG I GPRYCP Sbjct: 273 PFTGPPCPYFPNPQRDGWRPQLPCYLVHTTPQFHAIIRDNLHRAPLFSGVIAGVGPRYCP 332 Query: 277 SIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIR 336 SIEDKIVRF +++ H +FLEPEG T VY G +T+LPE++Q +R+IP L ++R Sbjct: 333 SIEDKIVRFADKDRHGLFLEPEGWTTSEVYVQGCNTSLPEDVQWAMLRSIPALRNAELMR 392 Query: 337 PGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKL 396 GYAIEYD + E+ L+ ++++GLFLAGQ+NGTTGYEEAAAQGL+AGIN+ R + Sbjct: 393 IGYAIEYDAVASGEIGADLQARRMAGLFLAGQVNGTTGYEEAAAQGLIAGINAVRYVRRQ 452 Query: 397 DCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCI 456 + R +YIGV+IDDL +K + EPYRMFTSRAE+R+ LR DNAD RLTP+ +LG + Sbjct: 453 PAVILGRDQAYIGVLIDDLVTKEITEPYRMFTSRAEHRLLLRGDNADLRLTPLAYELGLV 512 Query: 457 GERR-----QKRFAKYIQEYNFL--RSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLS 509 G R QKR A Q Y L + L +L N + T + + + + L+ Sbjct: 513 GAERLAAVEQKREA-VAQLYGQLAGQRLFPTLAF---NTALTEVGVDPLSQPMSVIDLLA 568 Query: 510 YPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFD 569 P L ++ D + VIE+L+I + Y Y RQ E ++ E R IP D Sbjct: 569 RPHVKYPQLQALL-DLPVADAGVIEQLEISAKYGGYIERQQREVDRLRKMESRRIPATLD 627 Query: 570 YSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTV 618 Y+SLP L NE ++ L +P L QA ++ G+TPA + +LL +++ V Sbjct: 628 YTSLPGLRNEARQVLLRFRPATLGQAGRLAGITPADVTILLFALERQGV 676 >gi|119331162|ref|NP_001073232.1| protein MTO1 homolog, mitochondrial [Gallus gallus] gi|53136448|emb|CAG32553.1| hypothetical protein RCJMB04_29e2 [Gallus gallus] Length = 646 Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust. Identities = 259/609 (42%), Positives = 372/609 (61%), Gaps = 38/609 (6%) Query: 44 MSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELY 103 MSCNP+ GG+GKGHL+RE+DALDGL GR+ D AG+ ++VLN KGPAV G R Q DR Y Sbjct: 1 MSCNPSFGGIGKGHLMREVDALDGLCGRICDVAGVHYKVLNRSKGPAVWGLRAQIDRRRY 60 Query: 104 RLAMQREILSQENLDVIQGEVAGF--------NTEKNIISSIVMQDNSMIRCSTVVLTTG 155 R +Q+EILS L V + V + K ++ +V+ D S + +V+LTTG Sbjct: 61 RDGVQKEILSTPLLTVREASVEDLLLTEPETNHPGKCQVTGVVLGDGSTVSAGSVILTTG 120 Query: 156 TFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTE 215 TFLRGVI +G PAGR+GD P+ L + K F GRLKTGTP RL TI + E Sbjct: 121 TFLRGVILMGLETHPAGRLGDQPAVWLAQTLEKLGFTVGRLKTGTPPRLAKDTINFSGLE 180 Query: 216 KQFADERLIPFSFMTDKITNR---QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGP 272 ++ D +PFSF++ + + Q+ C +T TNL+ +I+++N+ H + + P Sbjct: 181 ERVPDNPPVPFSFLSKAVWIKPEDQLLCYLTHTNLKAQQIVLDNL-HLNDHVRETNEGPP 239 Query: 273 -----------RYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQ 321 YCPS E K++RF R HQ++LEPEGL +DV+YP G+S LP E+Q Q Sbjct: 240 VRMWPHLRLLKAYCPSFESKVLRFPNRE-HQVWLEPEGLESDVIYPQGLSMTLPPELQEQ 298 Query: 322 FIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQ 381 IR+I GLEK I++PGY ++YD+++P++L +LE++ + LF AGQINGTTGYEEAAAQ Sbjct: 299 VIRSIRGLEKARILQPGYGVQYDFLDPRQLTASLESRLVQRLFFAGQINGTTGYEEAAAQ 358 Query: 382 GLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDN 441 G++AGIN+ + SRT+ Y+GV+IDDLT+ G EPYRMFTSR E+R+SLRPDN Sbjct: 359 GVIAGINACLRVQGKPPFIVSRTEGYVGVLIDDLTTLGTTEPYRMFTSRVEFRMSLRPDN 418 Query: 442 ADNRLTPIGM-KLGCIGERRQKRFAKYIQEYNFLR---SLLKSLVLTSKNLSSTSISFKQ 497 AD RLT G + GC+ Q+R+ + +Q L + LKSL + S Sbjct: 419 ADARLTHRGFEEAGCVS---QQRYEQAVQMRAALEDGIATLKSLQFSISKWSHLVPEVPI 475 Query: 498 DGKTR---TAYEFLSYPDFSIQNLFSICPDA-RKFSSL--VIERLQIESSYAAYTGRQMI 551 R +A++ L YP+ +++ L P+ RK + + ERL+IE++Y Q Sbjct: 476 SSNRRSPLSAFDILRYPEANMEILARAIPEPLRKLAEWRELSERLKIEAAYEWCVVNQQQ 535 Query: 552 EAKEIKFEEKRLIPKDFDYSSLPA-LSNELKEKLSILKPFNLLQASKIEGMTPAALNLLL 610 E +E++ +E +P+D DY ++ A LS E++EKL+ +P + S+I G+TPAA+ LL Sbjct: 536 EIEEVRRDEALRLPEDIDYFAIDASLSAEVREKLNSSRPQTIGAVSRIPGVTPAAIINLL 595 Query: 611 IYIKKNTVK 619 ++K +K Sbjct: 596 RFVKAEKLK 604 >gi|148657274|ref|YP_001277479.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Roseiflexus sp. RS-1] gi|205375712|sp|A5UY26|MNMG_ROSS1 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|148569384|gb|ABQ91529.1| glucose-inhibited division protein A [Roseiflexus sp. RS-1] Length = 679 Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust. Identities = 265/663 (39%), Positives = 373/663 (56%), Gaps = 48/663 (7%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAA AA++G T L+T + MSCNP+IGG KGHLVREIDAL Sbjct: 9 YDVIVVGAGHAGCEAAHAAARMGCRTLLLTIDLDKLAHMSCNPSIGGPAKGHLVREIDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLMGRV D IQ R+LN KGPAV+ PR QAD+ LY M+ + + NLD+ Q + Sbjct: 69 GGLMGRVTDRTFIQIRLLNESKGPAVQAPRAQADKRLYAKVMKETLETIPNLDLRQAMIE 128 Query: 126 GFNTEKNIIS----------------SIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKI 169 + I ++V + +C +VLTTGTFLRG G Sbjct: 129 RIILPRPINRNGSDTDDAEALCPGHYAVVTHTRRIYQCRALVLTTGTFLRGRAITGDAIW 188 Query: 170 PAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM 229 AGR G++P+ +L F RLKTGTP R+D +TI + T Q + F F Sbjct: 189 GAGRAGEAPATALGEDLAALGFPLVRLKTGTPPRIDARTIDFSLTSVQHGSATPLFFGFY 248 Query: 230 TDKITNR------------------------QIECGITRTNLETHRIIMENIKHSAIYSG 265 + Q+ C + T E H I+ N+ + ++SG Sbjct: 249 YRALNEAPPEPAFGGPPASAYPEPLLDAWRPQLPCYLVHTTPEFHEIVRRNLDRAPLFSG 308 Query: 266 DIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRT 325 I+ GPRYCPSIEDKIVRF ++ H +FLEPEG +T VY G +T+LPE++Q +R+ Sbjct: 309 IIEGVGPRYCPSIEDKIVRFADKERHGLFLEPEGWSTHEVYVQGCNTSLPEDVQWAMLRS 368 Query: 326 IPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVA 385 IP L +V ++R GYAIEYD + E+ + +++ GLF AGQINGTTGYEEAAAQGL+A Sbjct: 369 IPALRRVELMRAGYAIEYDALATGEIAADMSSRRAPGLFFAGQINGTTGYEEAAAQGLMA 428 Query: 386 GINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNR 445 GIN+AR + R ++YIGV+IDDL +K + EPYRMFTSRAE+R+ LR DNAD R Sbjct: 429 GINAARFVQGKPSVLLRRDEAYIGVLIDDLVTKEIREPYRMFTSRAEHRLLLRADNADLR 488 Query: 446 LTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL-----TSKNLSSTSISFKQDGK 500 LTP+ +LG + R + +E L ++L+ L + LS+ I+ G+ Sbjct: 489 LTPLAGELGLVDRERVAVVERKREEVERLLAVLRGKRLYPSAAINARLSAAGIA-PLTGE 547 Query: 501 TRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEE 560 +A E L P+ + L D + V E++ IE+ Y+ Y +Q E + ++ E Sbjct: 548 M-SAEEVLRRPEVRYRQLQPAL-DLPACEADVAEQVDIEAKYSGYLLKQQREVERLRRME 605 Query: 561 KRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVKL 620 R IP DFD+++L L NE ++ L +P + QA+++ G+ PA + LLL+ +++ T + Sbjct: 606 SRRIPPDFDFAALRGLRNEARQTLQRFRPATIGQAARLAGINPADIALLLVALERQTRQA 665 Query: 621 NEI 623 + Sbjct: 666 TPV 668 >gi|145347494|ref|XP_001418199.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144578428|gb|ABO96492.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 608 Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust. Identities = 269/613 (43%), Positives = 361/613 (58%), Gaps = 54/613 (8%) Query: 44 MSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELY 103 MSCNP+IGGLGKG L RE+DALDGLM R AD GIQFR+LN KGPAVRG R Q DRELY Sbjct: 1 MSCNPSIGGLGKGTLAREVDALDGLMARAADGGGIQFRMLNSSKGPAVRGARAQMDRELY 60 Query: 104 RLAMQREILSQENLDVIQGEVAGFNTE------KNIISSIVMQDNSMIRCSTVVLTTGTF 157 + +QR + + LDV+ V + + + ++ +V+ + +R +VV+TTGTF Sbjct: 61 KGEIQRLVSAVGGLDVVDAAVVDLDIDHASDGSRGVMRGVVLDNGRTLRAKSVVITTGTF 120 Query: 158 LRGVIHIGKLKIPAGRMGDS-----------PSNSLFNSFMKFDFDTGRLKTGTPARLDG 206 L GV+HIG ++ AGR+ + ++SL + F GR+KTGTP RLDG Sbjct: 121 LNGVLHIGSKRVVAGRLANDTTQQADLKAGEAAHSLARTLYGIGFKMGRMKTGTPPRLDG 180 Query: 207 KTIIWDKTEKQFADERLIPFSFMTD---------KITNRQIECGITRTNLETHRIIMENI 257 KTI W Q D +PF+F + K RQI C T T ET + I Sbjct: 181 KTIDWSACAPQPGDAVPVPFAFTSSSRPVHAEAWKPPARQIMCHSTYTTSETEKYIAAAP 240 Query: 258 KHSAIYSGDIKS-YGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPE 316 K S D++S PRYCPSIE K+ RF R H+I+LEPEGLNTDVVYPNGI+ L Sbjct: 241 K-SKYELDDVESPTTPRYCPSIESKVRRFPGRT-HRIWLEPEGLNTDVVYPNGITNNLEP 298 Query: 317 EIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYE 376 E+Q + +RTIPGLE I+ PGY +EYDY++P+EL TLETK+I GLFLAGQINGTTGYE Sbjct: 299 ELQKEMVRTIPGLENAVILSPGYGVEYDYVDPRELRITLETKRIQGLFLAGQINGTTGYE 358 Query: 377 EAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRIS 436 EAAAQG++AG N+A S + R SY+GV++DDLTS+G EPYRMF+SR EYR+S Sbjct: 359 EAAAQGVIAGANAA--SVDGEEFVVPRYSSYLGVLVDDLTSRGTSEPYRMFSSRVEYRLS 416 Query: 437 LRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT------------ 484 +R DNAD RLT +G + G + R + A+ L ++ L Sbjct: 417 IRSDNADLRLTELGERYGVVSAERARAAARRRTLVEQAGGALDAITLIPSRWQAYAPDLP 476 Query: 485 ----SKNLSSTSI---SFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 ++LS++++ + D R + L D ++ L S+ + R E Sbjct: 477 IAKHGRHLSASNMLAQGWDVDKILRVVADVLGPLDPHVRALRSVNEEDRS----AFECAA 532 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 IE+ Y Y RQ + +++ EE+ IP+ FDYS++ LS E +EKL ++P +AS+ Sbjct: 533 IEAYYKPYIERQAQDIDDMRREEELAIPETFDYSAIDNLSLEDREKLEAVRPTTFARASR 592 Query: 598 IEGMTPAALNLLL 610 I G+TPAAL LL Sbjct: 593 ISGVTPAALLSLL 605 >gi|224541705|ref|ZP_03682244.1| hypothetical protein CATMIT_00877 [Catenibacterium mitsuokai DSM 15897] gi|224525374|gb|EEF94479.1| hypothetical protein CATMIT_00877 [Catenibacterium mitsuokai DSM 15897] Length = 619 Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust. Identities = 247/617 (40%), Positives = 366/617 (59%), Gaps = 12/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IV+G GHAG EA A+ G T LIT S GSM CN +IGG KG +VREIDAL Sbjct: 2 YDIIVVGAGHAGIEACLAGARTGNKTLLITSNFSNAGSMPCNTSIGGPAKGIIVREIDAL 61 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ DA +Q ++LN KGP V+ R QAD++ Y MQ+ + QENLD+++ V Sbjct: 62 GGQMGKTTDATYLQMKMLNTAKGPGVQSLRAQADKKAYPRYMQKVLKEQENLDIVEAMVE 121 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + +++ D + T +LTTGT+L+ + +G K P+G S L + Sbjct: 122 DLIVEGDECKGVILADGTRYESHTTILTTGTYLKAEVLVGHSKTPSGPDKQKESLYLSSK 181 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--NRQIECGIT 243 + F RLKTGTP R++ +I + KT Q + + FS+ T T Q C +T Sbjct: 182 LKDYGFRIQRLKTGTPPRVEINSIDYSKTTVQPGTDAKLSFSYETTHFTPVEDQTVCYLT 241 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 T +TH++I +N+ A++SG IK GPRYCPSIEDK+V+F ++ HQIFLEPE + Sbjct: 242 YTTAQTHKLIRDNLDKCAMFSGLIKGIGPRYCPSIEDKVVKFADKERHQIFLEPESKEMN 301 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G ST++P +IQ + + ++PGLE I++ YAIEYD I+P +L+P+LETK + L Sbjct: 302 TIYVQGFSTSMPHDIQEKMVHSLPGLENCTILKYAYAIEYDAIDPLQLWPSLETKVLKNL 361 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGT+GYEEAA QGL+AGIN+++K + R ++YIGV+IDDL +KG EP Sbjct: 362 FTAGQINGTSGYEEAAGQGLIAGINASKKVKGNKPLILKRDEAYIGVLIDDLVTKGTKEP 421 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL-V 482 YRM TSRAEYR+ LR DNAD RL G G + + + ++ Y+ + N + + ++ L Sbjct: 422 YRMLTSRAEYRLLLRHDNADERLRKYGHDAGLVND---EVYSLYLDKMNRIHAEIERLDT 478 Query: 483 LTSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 + S + ++ G TR TA L P+ ++L + + R+ Sbjct: 479 IHFSPKSEINDLLEEKGSTRLKEGVTARAILQRPELVYEDLLPYIEHV-DLTEEEMRRVT 537 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I Y Y + + + +++K E++ IP D DY + LS E ++KL ++P + QA++ Sbjct: 538 ILIKYKGYIEKTLRQVEKVKNMEEKQIPADLDYDDVLNLSLEARQKLKKVRPVTIGQATR 597 Query: 598 IEGMTPAALNLLLIYIK 614 I G+ PA +++LLI++K Sbjct: 598 ISGINPADISVLLIHLK 614 >gi|325299507|ref|YP_004259424.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacteroides salanitronis DSM 18170] gi|324319060|gb|ADY36951.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacteroides salanitronis DSM 18170] Length = 623 Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust. Identities = 262/624 (41%), Positives = 366/624 (58%), Gaps = 17/624 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIG GHAGCEAAA +A LG+ T LIT + I MSCNPA+GG+ KG +VREIDA Sbjct: 4 NYDVIVIGAGHAGCEAAAASANLGSKTCLITMDMNKIAQMSCNPAVGGIAKGQIVREIDA 63 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ-ENLDVIQGE 123 L G MG V D IQFR+LN KGPA+ PR Q DR + + REIL NL + Q Sbjct: 64 LGGYMGIVTDRTAIQFRMLNRSKGPAMWSPRAQCDRAKF-IWTWREILENIPNLHIWQDT 122 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + +V V+LT GTFL G++HIG+ + GR + S L Sbjct: 123 VEELLVEDGEVKGVVTCWGVTFYARCVILTAGTFLNGLMHIGRKMLAGGRCAEPASYHLT 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 S + GR+KTGTP R+D +++ + E Q + FSFM++ +Q++C Sbjct: 183 ESITRHGITAGRMKTGTPVRIDARSVDFSLMETQDGENDFHSFSFMSEPRHLKQLQCWTC 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN E H ++ + S +Y+G I+S GPRYCPSIE KIV F ++ HQ+FLEPEG T Sbjct: 243 YTNEEVHAVLRSGLADSPLYNGQIQSIGPRYCPSIETKIVTFPDKPQHQLFLEPEGETTR 302 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y NG S++LP +IQ +R IP V RPGYAIEYDY +P +L TLE+K I L Sbjct: 303 ELYLNGFSSSLPMDIQFAALRKIPCFRNVVAYRPGYAIEYDYFDPTQLTHTLESKVIKNL 362 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ+NGTTGYEEA QG++AGIN+ + + R ++YIGV+IDDL +KGV EP Sbjct: 363 FFAGQVNGTTGYEEAGGQGIIAGINAHQNCTGGEPFVLGRDEAYIGVLIDDLVTKGVDEP 422 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYRI LR D+AD RLT +LG ++ R+ ++ ++ L++ + Sbjct: 423 YRMFTSRAEYRILLRQDDADMRLTERAYRLGLA---KRDRYDMLCRKREMIQHLVEFAKV 479 Query: 484 TSKNLSSTSISFKQDGKTRTAY-----EFLSYPDFSIQNLFSICPDARKFSSLVIERLQ- 537 S + + + G R A+ + LS P +I+N+ P + V +R + Sbjct: 480 YSIKTDKINDTLESLGTARLAHGCKLIDLLSRPQITIENIAPHIPAFQAELDKVTDRKEE 539 Query: 538 -IESS-----YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 +E++ Y Y R+ + A +I E I FDY++L +LS E ++KL + P Sbjct: 540 TLEAAEVLIKYQGYIDRERMIADKIHRLESIKIKGRFDYANLNSLSTEARQKLIKIDPET 599 Query: 592 LLQASKIEGMTPAALNLLLIYIKK 615 L QAS+I G++P+ +N+LL+ + + Sbjct: 600 LAQASRIPGISPSDINVLLVLLGR 623 >gi|115375135|ref|ZP_01462403.1| glucose-inhibited division protein A subfamily [Stigmatella aurantiaca DW4/3-1] gi|115367881|gb|EAU66848.1| glucose-inhibited division protein A subfamily [Stigmatella aurantiaca DW4/3-1] Length = 621 Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust. Identities = 254/630 (40%), Positives = 365/630 (57%), Gaps = 36/630 (5%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + YDVIV+G GHAGCEAA ++LG ST +T K MSCNPA+GG KGHLVRE Sbjct: 15 MKHRYDVIVVGLGHAGCEAALACSRLGLSTLGLTLKRDRAAVMSCNPAVGGTAKGHLVRE 74 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DAL G MGR AD +G F+ LN KGPAV+ R DR+ Y +Q + SQ +L V + Sbjct: 75 LDALGGEMGRAADLSGTHFKTLNASKGPAVQATRILCDRDAYARTVQAALFSQPHLTVHE 134 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 EV+ E ++ +V+ D S ++ V+LTTGTFL+ ++H+G+ K GR+GD + Sbjct: 135 AEVSSLAVEDGHVAGVVLGDGSQVQARAVLLTTGTFLQALMHVGEKKEVGGRLGDEAARG 194 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK--------I 233 L S F GR KTGTPARL +I WD E Q D PFS+ T + Sbjct: 195 LSLSLRSLGFTLGRFKTGTPARLRRDSIDWDAVEPQPTDAPPRPFSWRTRQDIASGVPFP 254 Query: 234 TNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQI 293 + CGIT T THR++ +N+ S ++ GDI GPRYCPS+EDK+VRF R HQ+ Sbjct: 255 LQPSVTCGITFTTEATHRLLRDNLHRSPLFQGDIVGRGPRYCPSLEDKVVRFAARERHQV 314 Query: 294 FLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFP 353 FLEPEG ++ +VYP G+ST++P ++Q F+R+IPGL +V ++R GYA+EYDY P +L Sbjct: 315 FLEPEGPDSPLVYPAGLSTSMPADVQLDFLRSIPGLAQVEVVRFGYAVEYDYAPPTQLSS 374 Query: 354 TLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMID 413 TLETK + GLF AGQ+NGT+GYEEAA QGL AG+N+A + + R +++ V++D Sbjct: 375 TLETKAVRGLFFAGQLNGTSGYEEAAFQGLYAGLNAALQVKGEPPLLLGREEAHGAVLVD 434 Query: 414 DLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNF 473 +L +KGV EP+RMFTSR+E+R+ LR NA+ RL G ++G + +R + Sbjct: 435 ELVTKGVDEPFRMFTSRSEHRLKLREGNAEARLARHGHRVGLLPREALERVEARVHAVQR 494 Query: 474 LRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVI 533 + LK L ++ L P+ + S+ +AR++ + Sbjct: 495 EVARLKRSGLGAR---------------------LKRPEVTYA---SLAAEAREWPEVPP 530 Query: 534 ERLQIESSYAAYTG----RQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 E + Y G + A+E + +IP F ++ + LS+E EKLS +P Sbjct: 531 EVAEEVEVEVKYEGYIAQAERAAAREADAWDGWVIPAGFRFAEVRGLSSEAVEKLSAHRP 590 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 + Q +I G+TPAAL+L+L+ +K+ + Sbjct: 591 GTVGQVRRIPGLTPAALSLVLVALKRERAR 620 >gi|310825572|ref|YP_003957930.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmg [Stigmatella aurantiaca DW4/3-1] gi|309398644|gb|ADO76103.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [Stigmatella aurantiaca DW4/3-1] Length = 607 Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust. Identities = 254/630 (40%), Positives = 365/630 (57%), Gaps = 36/630 (5%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + YDVIV+G GHAGCEAA ++LG ST +T K MSCNPA+GG KGHLVRE Sbjct: 1 MKHRYDVIVVGLGHAGCEAALACSRLGLSTLGLTLKRDRAAVMSCNPAVGGTAKGHLVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DAL G MGR AD +G F+ LN KGPAV+ R DR+ Y +Q + SQ +L V + Sbjct: 61 LDALGGEMGRAADLSGTHFKTLNASKGPAVQATRILCDRDAYARTVQAALFSQPHLTVHE 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 EV+ E ++ +V+ D S ++ V+LTTGTFL+ ++H+G+ K GR+GD + Sbjct: 121 AEVSSLAVEDGHVAGVVLGDGSQVQARAVLLTTGTFLQALMHVGEKKEVGGRLGDEAARG 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK--------I 233 L S F GR KTGTPARL +I WD E Q D PFS+ T + Sbjct: 181 LSLSLRSLGFTLGRFKTGTPARLRRDSIDWDAVEPQPTDAPPRPFSWRTRQDIASGVPFP 240 Query: 234 TNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQI 293 + CGIT T THR++ +N+ S ++ GDI GPRYCPS+EDK+VRF R HQ+ Sbjct: 241 LQPSVTCGITFTTEATHRLLRDNLHRSPLFQGDIVGRGPRYCPSLEDKVVRFAARERHQV 300 Query: 294 FLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFP 353 FLEPEG ++ +VYP G+ST++P ++Q F+R+IPGL +V ++R GYA+EYDY P +L Sbjct: 301 FLEPEGPDSPLVYPAGLSTSMPADVQLDFLRSIPGLAQVEVVRFGYAVEYDYAPPTQLSS 360 Query: 354 TLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMID 413 TLETK + GLF AGQ+NGT+GYEEAA QGL AG+N+A + + R +++ V++D Sbjct: 361 TLETKAVRGLFFAGQLNGTSGYEEAAFQGLYAGLNAALQVKGEPPLLLGREEAHGAVLVD 420 Query: 414 DLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNF 473 +L +KGV EP+RMFTSR+E+R+ LR NA+ RL G ++G + +R + Sbjct: 421 ELVTKGVDEPFRMFTSRSEHRLKLREGNAEARLARHGHRVGLLPREALERVEARVHAVQR 480 Query: 474 LRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVI 533 + LK L ++ L P+ + S+ +AR++ + Sbjct: 481 EVARLKRSGLGAR---------------------LKRPEVTYA---SLAAEAREWPEVPP 516 Query: 534 ERLQIESSYAAYTG----RQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 E + Y G + A+E + +IP F ++ + LS+E EKLS +P Sbjct: 517 EVAEEVEVEVKYEGYIAQAERAAAREADAWDGWVIPAGFRFAEVRGLSSEAVEKLSAHRP 576 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 + Q +I G+TPAAL+L+L+ +K+ + Sbjct: 577 GTVGQVRRIPGLTPAALSLVLVALKRERAR 606 >gi|291297418|ref|YP_003508816.1| glucose inhibited division protein A [Meiothermus ruber DSM 1279] gi|290472377|gb|ADD29796.1| glucose inhibited division protein A [Meiothermus ruber DSM 1279] Length = 610 Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust. Identities = 257/623 (41%), Positives = 364/623 (58%), Gaps = 32/623 (5%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M R+YDVIV+GGGHAG EAA AA+LGA L+T IG M CNPA+GG GK LV Sbjct: 7 MGMRAYDVIVVGGGHAGIEAAWAAARLGARVGLVTSNPERIGLMPCNPAVGGPGKSQLVA 66 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EI+AL GLMGR+ADA I RVLN KGPAV+ R Q DR+LY L QR +L ++ + Sbjct: 67 EIEALGGLMGRLADATAIHTRVLNRSKGPAVQSLRVQVDRDLYALEAQRVLLGHPQIESV 126 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 + EVA E+ + + D + VV+ +GTFL+GV+ G+ PAGR G+ P+ Sbjct: 127 RAEVAALWVERGRLCGVQTVDGRKLPARAVVVASGTFLQGVVWYGRQSRPAGRQGEPPAR 186 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERL-----IPFSFMTDKITN 235 L S R KTGTP R+ ++ + K E AD +P T + T Sbjct: 187 FLSESLRAVGHRLLRFKTGTPPRIQADSVDYQKLEVVPADNPPETFSGVPGPHATARPTW 246 Query: 236 RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFL 295 + TRT THR+I EN+ S +Y GDI+ GPRYCPSIEDK+VRF ++ H +F+ Sbjct: 247 Q------TRTTAATHRLIQENLHLSPLYGGDIEGIGPRYCPSIEDKVVRFSDKETHLLFV 300 Query: 296 EPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTL 355 EP+GL+T +Y G S++LP E+Q Q ++++PG E+ I R YA+EYD ++P EL P L Sbjct: 301 EPDGLHTTELYLQGFSSSLPPELQIQMVQSLPGFERAVIQRYAYAVEYDAVDPLELTPGL 360 Query: 356 ETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDL 415 +++ + GLF AGQ+NGT+GYEEAAAQGL+AG+N+AR + L+ R YIGVMIDDL Sbjct: 361 QSRMLPGLFTAGQLNGTSGYEEAAAQGLLAGLNAARYAMGLEEAHLPRASGYIGVMIDDL 420 Query: 416 TSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGC-IGERRQKRFAKYIQEYNFL 474 +GV EPYRM TSR E R+ R DNAD RL P+ G + E + AKY + L Sbjct: 421 VHRGVDEPYRMMTSRVELRLLCRSDNADERLVPLAADWGLRLAEDLKAVQAKYARVQGEL 480 Query: 475 RSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI--CPDARKFSSLV 532 L +S + + +A ++L P+ S + + + P+ S Sbjct: 481 LRLQRSRI-----------------EGVSALQYLRRPEASYEQVLQMIGSPEM-PLSKAE 522 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 ++++ + YA Y RQ +++K E +P D DY+ +P+LS E EKL ++P ++ Sbjct: 523 AYQVEVRAKYAGYMERQARLREKLKELEAYRLPADLDYACVPSLSKEAVEKLGRIRPHSV 582 Query: 593 LQASKIEGMTPAALNLLLIYIKK 615 +AS++ G+ + + LL++I K Sbjct: 583 AEASRVPGIRDSDITALLVHIAK 605 >gi|38197078|gb|AAH05808.2| MTO1 protein [Homo sapiens] Length = 653 Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust. Identities = 261/617 (42%), Positives = 377/617 (61%), Gaps = 50/617 (8%) Query: 44 MSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELY 103 MSCNP+ GG+GKGHL+RE+DALDGL R+ D +G+ ++VLN +KGPAV G R Q DR+LY Sbjct: 11 MSCNPSFGGIGKGHLMREVDALDGLCSRICDQSGVHYKVLNRRKGPAVWGLRAQIDRKLY 70 Query: 104 RLAMQREILSQENLDVIQGEVAGF--------NTEKNIISSIVMQDNSMIRCSTVVLTTG 155 + MQ+EIL+ L V +G V +T K +S +V+ D S + +V+LTTG Sbjct: 71 KQNMQKEILNTPLLTVQEGAVEDLILTEPEPEHTGKCRVSGVVLVDGSTVYAESVILTTG 130 Query: 156 TFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTE 215 TFLRG+I IG PAGR+GD PS L + K F GRLKTGTP R+ ++I + Sbjct: 131 TFLRGMIVIGLETHPAGRLGDQPSIGLAQTLEKLGFVVGRLKTGTPPRIAKESINFSILN 190 Query: 216 KQFADERLIPFSFMTDKITNR---QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGP 272 K D IPFSF + + + Q+ C +T TN I+++N+ ++ + GP Sbjct: 191 KHIPDNPSIPFSFTNETVWIKPEDQLPCYLTHTNPRVDEIVLKNLHLNSHVKETTR--GP 248 Query: 273 RYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKV 332 RYCPSIE K++RF R HQ++LEPEG+++D++YP G+S LP E+Q + I I GLEK Sbjct: 249 RYCPSIESKVLRFPNRL-HQVWLEPEGMDSDLIYPQGLSMTLPAELQEKMITCIRGLEKA 307 Query: 333 NIIRP-------------------------GYAIEYDYINPKELFPTLETKKISGLFLAG 367 +I+P GY ++YDY++P+++ P+LET + LF AG Sbjct: 308 KVIQPDGVLLLLPRMECNGAISAHHNLPLPGYGVQYDYLDPRQITPSLETHLVQRLFFAG 367 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 QINGTTGYEEAAAQG++AGIN++ + ++ SRT+ YIGV+IDDLT+ G EPYRMF Sbjct: 368 QINGTTGYEEAAAQGVIAGINASLRVSRKPPFVVSRTEGYIGVLIDDLTTLGTSEPYRMF 427 Query: 428 TSRAEYRISLRPDNADNRLTPIGMK-LGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS- 485 TSR E+R+SLRPDNAD+RLT G K GC+ ++R +R S+LKS+ S Sbjct: 428 TSRVEFRLSLRPDNADSRLTLRGYKDAGCVSQQRYERACWMKSSLEEGISVLKSIEFLSS 487 Query: 486 ---KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA-RKFSSL--VIERLQIE 539 K + SIS + R A + L Y + + +L P+ +K++ + ERL+IE Sbjct: 488 KWKKLIPEASISTSRSLPVR-ALDVLKYEEVDMDSLAKAVPEPLKKYTKCRELAERLKIE 546 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLP--ALSNELKEKLSILKPFNLLQASK 597 ++Y + Q+ E K ++ +E +PKD DY ++ +LS+E++EKL +P + AS+ Sbjct: 547 ATYESVLFHQLQEIKGVQQDEALQLPKDLDYLTIRDVSLSHEVREKLHFSRPQTIGAASR 606 Query: 598 IEGMTPAALNLLLIYIK 614 I G+TPAA+ LL ++K Sbjct: 607 IPGVTPAAIINLLRFVK 623 >gi|55961491|emb|CAI14882.1| mitochondrial translation optimization 1 homolog (S. cerevisiae) [Homo sapiens] gi|119569149|gb|EAW48764.1| mitochondrial translation optimization 1 homolog (S. cerevisiae), isoform CRA_e [Homo sapiens] Length = 643 Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust. Identities = 261/617 (42%), Positives = 377/617 (61%), Gaps = 50/617 (8%) Query: 44 MSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELY 103 MSCNP+ GG+GKGHL+RE+DALDGL R+ D +G+ ++VLN +KGPAV G R Q DR+LY Sbjct: 1 MSCNPSFGGIGKGHLMREVDALDGLCSRICDQSGVHYKVLNRRKGPAVWGLRAQIDRKLY 60 Query: 104 RLAMQREILSQENLDVIQGEVAGF--------NTEKNIISSIVMQDNSMIRCSTVVLTTG 155 + MQ+EIL+ L V +G V +T K +S +V+ D S + +V+LTTG Sbjct: 61 KQNMQKEILNTPLLTVQEGAVEDLILTEPEPEHTGKCRVSGVVLVDGSTVYAESVILTTG 120 Query: 156 TFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTE 215 TFLRG+I IG PAGR+GD PS L + K F GRLKTGTP R+ ++I + Sbjct: 121 TFLRGMIVIGLETHPAGRLGDQPSIGLAQTLEKLGFVVGRLKTGTPPRIAKESINFSILN 180 Query: 216 KQFADERLIPFSFMTDKITNR---QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGP 272 K D IPFSF + + + Q+ C +T TN I+++N+ ++ + GP Sbjct: 181 KHIPDNPSIPFSFTNETVWIKPEDQLPCYLTHTNPRVDEIVLKNLHLNSHVKETTR--GP 238 Query: 273 RYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKV 332 RYCPSIE K++RF R HQ++LEPEG+++D++YP G+S LP E+Q + I I GLEK Sbjct: 239 RYCPSIESKVLRFPNRL-HQVWLEPEGMDSDLIYPQGLSMTLPAELQEKMITCIRGLEKA 297 Query: 333 NIIRP-------------------------GYAIEYDYINPKELFPTLETKKISGLFLAG 367 +I+P GY ++YDY++P+++ P+LET + LF AG Sbjct: 298 KVIQPDGVLLLLPRMECNGAISAHHNLPLPGYGVQYDYLDPRQITPSLETHLVQRLFFAG 357 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 QINGTTGYEEAAAQG++AGIN++ + ++ SRT+ YIGV+IDDLT+ G EPYRMF Sbjct: 358 QINGTTGYEEAAAQGVIAGINASLRVSRKPPFVVSRTEGYIGVLIDDLTTLGTSEPYRMF 417 Query: 428 TSRAEYRISLRPDNADNRLTPIGMK-LGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS- 485 TSR E+R+SLRPDNAD+RLT G K GC+ ++R +R S+LKS+ S Sbjct: 418 TSRVEFRLSLRPDNADSRLTLRGYKDAGCVSQQRYERACWMKSSLEEGISVLKSIEFLSS 477 Query: 486 ---KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA-RKFSSL--VIERLQIE 539 K + SIS + R A + L Y + + +L P+ +K++ + ERL+IE Sbjct: 478 KWKKLIPEASISTSRSLPVR-ALDVLKYEEVDMDSLAKAVPEPLKKYTKCRELAERLKIE 536 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLP--ALSNELKEKLSILKPFNLLQASK 597 ++Y + Q+ E K ++ +E +PKD DY ++ +LS+E++EKL +P + AS+ Sbjct: 537 ATYESVLFHQLQEIKGVQQDEALQLPKDLDYLTIRDVSLSHEVREKLHFSRPQTIGAASR 596 Query: 598 IEGMTPAALNLLLIYIK 614 I G+TPAA+ LL ++K Sbjct: 597 IPGVTPAAIINLLRFVK 613 >gi|303280357|ref|XP_003059471.1| predicted protein [Micromonas pusilla CCMP1545] gi|226459307|gb|EEH56603.1| predicted protein [Micromonas pusilla CCMP1545] Length = 731 Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust. Identities = 263/630 (41%), Positives = 370/630 (58%), Gaps = 31/630 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAA +A+ GA T L+T + CNPA+GG K LV E+DAL Sbjct: 77 YDVIVVGAGHAGCEAALASARKGARTLLLTLSLDRVAWQPCNPAVGGPAKSQLVHEVDAL 136 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G +GR+AD +Q RVLN +GPAV R Q D+ Y M R L +E L I+ Sbjct: 137 GGEIGRIADKTYLQKRVLNASRGPAVWALRAQTDKWEYSREM-RARLEREPLIAIR---- 191 Query: 126 GFNTEKNIISSIVMQDNSMIR-----------CSTVVLTTGTFLRGVIHIGKLKIPAGRM 174 + + + +V+ DN ++ VVLTTGTF+ G I +G+ + AGR Sbjct: 192 -----EGMATELVLGDNDDVKGVKTFFGMTFTSRAVVLTTGTFMSGQIWVGRKTLAAGRA 246 Query: 175 GDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT 234 G++PS L + F+T RLKTGTPAR+D ++I + E+Q DE + F+F + Sbjct: 247 GEAPSVGLTECLVDLGFETDRLKTGTPARVDSRSIQYRGLERQPGDEDVRWFTFDENAHV 306 Query: 235 NR-QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQI 293 R Q++C +TRT ETH +I EN+ + Y G + + GPRYCPSIEDKIVRF E++ HQI Sbjct: 307 ARPQMDCHLTRTTAETHALIRENLHETPTYGGWVGAKGPRYCPSIEDKIVRFAEKDSHQI 366 Query: 294 FLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFP 353 FLEPEG + VY G ST LPE +Q +RT+PGLE ++RP YA+EYD++ + P Sbjct: 367 FLEPEGRDVPEVYVQGFSTGLPERLQLALLRTLPGLEACKMLRPAYAVEYDFLPAYQCGP 426 Query: 354 TLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMID 413 TLETKKISGLF +GQINGTTGYEEAA QGL+AG N+A + + R SY+G +ID Sbjct: 427 TLETKKISGLFFSGQINGTTGYEEAAGQGLLAGANAAAVALATSALILPRESSYLGTLID 486 Query: 414 DLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR-----QKRFAKYI 468 DL +K + EPYRM TSR+EYR+ LR DNAD RLTP+G + G + + R +KR A Sbjct: 487 DLCTKDLREPYRMLTSRSEYRLVLRSDNADARLTPLGRECGLVDDDRWRFFTEKRDAMER 546 Query: 469 QEYNFLRSLLKSLVLTSKNL--SSTSISFKQDGKTRTAYEFLSYPDFSIQNL--FSICPD 524 + + +KS ++ + S + + K ++ T E L P S + D Sbjct: 547 ETTRLTTTRVKSDTPLAQRVIDISGANAAKPSRQSFTLRELLRRPRVSHATFAEYGHGGD 606 Query: 525 ARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKL 584 S E ++ E Y + RQ ++ ++ + + IPKD Y+ + L E +EKL Sbjct: 607 ENSLSRWAAEAVETEVKYEGFIKRQEVQVAKVAGKMNKAIPKDVCYADVTTLRMEAREKL 666 Query: 585 SILKPFNLLQASKIEGMTPAALNLLLIYIK 614 + ++P + QAS+I G+TPA + LL++++ Sbjct: 667 AKMRPTTIGQASRIGGVTPADVASLLVHLE 696 >gi|295131913|ref|YP_003582589.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Zunongwangia profunda SM-A87] gi|294979928|gb|ADF50393.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Zunongwangia profunda SM-A87] Length = 623 Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust. Identities = 271/631 (42%), Positives = 378/631 (59%), Gaps = 28/631 (4%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M N+ YDVIV+G GHAG EAAA AA +G ST L+T I MSCNPA+GG+ KG +VR Sbjct: 1 MFNKEYDVIVVGAGHAGSEAAAAAANMGCSTLLVTMNLQNIAQMSCNPAMGGIAKGQIVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDA+ G G V+D + IQF++LN KGPA+ PR Q+DR + + + NLD Sbjct: 61 EIDAMGGYSGLVSDTSAIQFKMLNKSKGPAMWSPRVQSDRMRFAEDWRLRLEQTPNLDFY 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V G E I + IR +VV T GTFL G+IHIG + GR G++ + Sbjct: 121 QEMVHGLIIENGKIKGVRTSLGIEIRAKSVVCTNGTFLNGLIHIGDKQRGGGRAGEAAAT 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIE 239 + + F+ GR+KTGTP R+DG+++ + K +Q DE FS+ + K ++Q Sbjct: 181 GITKDLIDAGFEAGRMKTGTPPRVDGRSLDYSKMIEQPGDEVPGKFSYSDETKPLSKQRS 240 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +T T+ E H I+ S +++G IKS GPRYCPSIEDKI RF +++ HQ+F+EPEG Sbjct: 241 CYMTYTSNEVHDILRSGFDRSPMFNGRIKSLGPRYCPSIEDKINRFADKDRHQLFVEPEG 300 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 NT VY NG ST+LPE++Q + ++ G E V RPGYAIEYDY P +L TLETK Sbjct: 301 WNTVEVYVNGFSTSLPEDVQFAALSSVAGFENVKFFRPGYAIEYDYFPPTQLQHTLETKL 360 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 + GL+ AGQINGTTGYEEAA QG++AGIN+A K + D R ++YIGV+IDDL +KG Sbjct: 361 VDGLYFAGQINGTTGYEEAACQGMMAGINAALKVQEKDPFILQRNEAYIGVLIDDLITKG 420 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR LR DNAD RLT KLG E R ++ + ++ S LK Sbjct: 421 TEEPYRMFTSRAEYRTLLRQDNADFRLTERSYKLGLASEDRMRKMEEKKEKSLAFVSFLK 480 Query: 480 SLVLTSKNLSS-----TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL--- 531 + ++ + S KQ K ++ S P+ ++ D RKF + Sbjct: 481 DTSVVPEDANPVLADYNSSPMKQSDKI---FKIFSRPNIAMD-------DVRKFPGVEEY 530 Query: 532 ---------VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKE 582 ++E+ +I+ Y+ Y ++ A ++ E IPK FDYS + ++S E +E Sbjct: 531 IQQHHLDTEMLEQTEIQIKYSGYIQKEKNNADKLNRLEDVKIPKHFDYSKIKSMSFEARE 590 Query: 583 KLSILKPFNLLQASKIEGMTPAALNLLLIYI 613 KL+ ++P N+ QAS+I G++P +++LL+Y+ Sbjct: 591 KLNKIQPANVSQASRISGVSPNDISVLLVYM 621 >gi|194246538|ref|YP_002004177.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Candidatus Phytoplasma mali] gi|193806895|emb|CAP18324.1| Glucose-inhibited division protein A [Candidatus Phytoplasma mali] Length = 624 Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust. Identities = 254/616 (41%), Positives = 376/616 (61%), Gaps = 8/616 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YD IV+GGGHAG EAA + AK T LIT IG + CNPAIGG KG +VREIDA Sbjct: 2 NYDSIVVGGGHAGIEAALILAKKNKKTLLITGSLEQIGCLPCNPAIGGPAKGVVVREIDA 61 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G+MG+ AD + IQ ++LN KGPAVR R Q D+ Y + + NL +++G V Sbjct: 62 LGGIMGKAADLSQIQMKMLNSSKGPAVRALRAQIDKLKYPKVILEILKKTNNLTLLEGLV 121 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 N I + +++ S+I TV++TTGT+L I IG+ KI +G + + + Sbjct: 122 EELIINNNQIEGVKLKNKSIIFGKTVIITTGTYLSSKIFIGEDKILSGPNNNPTNYGISK 181 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGIT 243 + +F+ RLKTGTP R+ TI + KT+ Q+ ++ FSF + K +Q C +T Sbjct: 182 QLKQNNFEIIRLKTGTPPRIKKNTIDYSKTKIQYGNDVFQTFSFDSPIKTIGKQEPCFLT 241 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +T+ II + +K S++Y G I+ GPRYCPSIEDK+VRF +N HQ+F+EPE L + Sbjct: 242 YTNQKTNDIINKYLKQSSMYGGYIEGKGPRYCPSIEDKVVRFCNKNQHQVFIEPESLKLN 301 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G+ST++P+ +QH+ ++TIPGLE I++ GYAIEYD +NP +L+ +LETKKI L Sbjct: 302 EMYLQGLSTSMPKHVQHKILKTIPGLENAEIVKYGYAIEYDALNPNQLYHSLETKKIKNL 361 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGT+GYEEAA QGL+AGIN++ K R ++YIGV+IDDL +KG EP Sbjct: 362 FFAGQINGTSGYEEAACQGLIAGINASLKMENKPPFILKRNEAYIGVLIDDLINKGTHEP 421 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAE+R+ LR DNAD RL K+ I E ++F + + +++L + Sbjct: 422 YRLLTSRAEFRLLLRHDNADLRLKEHAYKMALISEENYQKFKTKKNKIKDVLKQIENLQI 481 Query: 484 --TSKNLSSTSISFKQD--GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 KNL+ S +F+ + + + L P+ + L + + E+++I+ Sbjct: 482 EPNKKNLNYLS-NFQSSLISEKTSLSQLLKRPEINFHFLKYFFQE--NIDHYIFEQVEIQ 538 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + E ++ E ++I + +YS + LS E +EKL ++KP+NL QAS+I Sbjct: 539 IKYQGYIKKAQKEVDKLLKLEGKIISTNIEYSKINNLSKEAQEKLDLIKPYNLGQASRIS 598 Query: 600 GMTPAALNLLLIYIKK 615 G+ P +++L+IY++K Sbjct: 599 GINPTDISILMIYLEK 614 >gi|257457426|ref|ZP_05622596.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Treponema vincentii ATCC 35580] gi|257445155|gb|EEV20228.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Treponema vincentii ATCC 35580] Length = 639 Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust. Identities = 262/637 (41%), Positives = 373/637 (58%), Gaps = 36/637 (5%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAG EA+ AA+LGA T LIT TIG MSCNP+IGG+ KG++VREIDAL Sbjct: 11 YDVIVVGGGHAGIEASLAAARLGAHTLLITQTVDTIGRMSCNPSIGGVSKGNIVREIDAL 70 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENL-------- 117 G MG++ADA IQ+R+LN +GPAV+ PR QAD+ LY Q + ++NL Sbjct: 71 GGEMGKLADACMIQYRLLNKSRGPAVQSPRIQADKFLYAQTAQYTLEKEKNLHIYQDTVV 130 Query: 118 DVIQGEVAGFNT-EKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGD 176 DVI + A E + +++ I VVLTTGTF+ G I+IG+ + GR+G+ Sbjct: 131 DVISSQTAESGVVENGSVQAVLTARGRTISARAVVLTTGTFMEGKIYIGEFEAEEGRLGE 190 Query: 177 SPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR 236 + L + + F GRLKTGTP R+ K++ E Q AD + PFSF T +I Sbjct: 191 KAAIGLGTALARKGFTMGRLKTGTPCRVLRKSVDLSVLEIQEADAVMRPFSFDTAEIFRP 250 Query: 237 QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLE 296 C + TN TH +I +N S ++SG I + G RYCPSIEDK+ +F ER HQ+++E Sbjct: 251 SAVCYVCYTNEHTHEVIRQNFHRSPLFSGKIHATGARYCPSIEDKVRKFPERTRHQLYIE 310 Query: 297 PEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLE 356 PEGL +D +Y NG S++LPE++Q Q +RT+ G I RP YA++Y I+P +L P L+ Sbjct: 311 PEGLMSDELYINGFSSSLPEDVQDQMLRTLTGFADAVITRPAYAVDYAVISPLQLGPDLQ 370 Query: 357 TKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKL-------------DCICFSR 403 T++I+GLF AGQINGT+GYEEA QGL+AGIN+A S + R Sbjct: 371 TRRIAGLFTAGQINGTSGYEEAGGQGLIAGINAALYSRACSTQPQPGTRPAAYEPFTLRR 430 Query: 404 TDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGE----R 459 ++YIGVMIDDL ++GV EPYRMFT+RAEYR+ LR D AD RLT ++G + R Sbjct: 431 DEAYIGVMIDDLITQGVDEPYRMFTARAEYRLKLRHDTADERLTERAFRIGLQKQSSFTR 490 Query: 460 RQKRFAKY--IQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQN 517 Q++ A+ + E+ R + SL L Q ++ + L P S++ Sbjct: 491 LQEKLAQRGELIEHWRERKITGSLAEAEPAL--------QCHLGKSFADALHDPLISLEL 542 Query: 518 LFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALS 577 + P++ ++S + ++E Y Y Q ++K E IP +F+Y ++ LS Sbjct: 543 ICRCDPESTRYSDAIKTAAELEIRYEHYIIAQDKRIDKMKKMETSRIPANFNYDAVSGLS 602 Query: 578 NELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIK 614 E +L + P + QAS+I G+ P+ + +L++ IK Sbjct: 603 TESLARLKKVMPATIGQASRIPGIRPSDIMVLMVAIK 639 >gi|166222943|sp|Q4AAU6|MNMG_MYCHJ RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|144227418|gb|AAZ44097.2| glucose inhibited division protein A [Mycoplasma hyopneumoniae J] Length = 619 Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust. Identities = 265/611 (43%), Positives = 361/611 (59%), Gaps = 15/611 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D IV+GGGHAG EA K LIT + SM CNPAIGG KG + REIDAL Sbjct: 12 FDAIVVGGGHAGIEAVYALLKKKLKVVLITLDKKKLASMPCNPAIGGPAKGIITREIDAL 71 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+ G+ +D A IQ + LN KGPAV R Q D+E Y + +++ QENL +I+ V+ Sbjct: 72 GGVQGKFSDLAMIQIKYLNESKGPAVLAIRAQIDKEKYSKLILKDLKKQENLLIIEDLVS 131 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 EKN + + + TV++TTGT++ + G L IP+G G SN L N+ Sbjct: 132 ELLVEKNRVFGLKTAKKQVFFSKTVIITTGTYMDSKVLRGSLAIPSGPDGQQTSNLLSNN 191 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + F+ RLKTGTP R+ +I + K EK+ I FSF + +QI C +T T Sbjct: 192 LKRLGFELQRLKTGTPPRIFTSSIDFSKVEKEVLPVYNINFSFQSKHKIKKQISCYLTYT 251 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 +TH II +N+ S++YSG I GPRYCPSIEDKIVRF E+ HQIF EPE D++ Sbjct: 252 TAKTHDIINKNLGKSSMYSGLISGVGPRYCPSIEDKIVRFSEKPRHQIFFEPETKKQDIM 311 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG+ST++PE++Q + ++TIPGLE I + GYAIEYD +NP EL +LETKK+ GLF+ Sbjct: 312 YINGLSTSMPEDVQLEMVKTIPGLENAKIAKFGYAIEYDALNPLELKKSLETKKVKGLFM 371 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGT+GYEEAAAQGLVAGIN+ + + R D YIGV+IDDL +KG EPYR Sbjct: 372 AGQINGTSGYEEAAAQGLVAGINAGQFVLGKKPVEILRNDGYIGVLIDDLVTKGTKEPYR 431 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF-AKYIQEYNFLRSLLKSLVLT 484 M TSRAEYR+ LR DNAD R+ +K G I ++ + AKY + + L K V Sbjct: 432 MLTSRAEYRLILRNDNADIRMAKYALKSGLISKKEYLKIKAKYAKIDRKILELSKEFVSP 491 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDAR-KFSSLVIERLQIESSYA 543 L+ K+ K + +S+P+ N I PD + V+ RL+ Sbjct: 492 KDELAKKYNLEKRISKLK----LISWPNV---NFKDILPDFEFGYELTVMARLK------ 538 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y +Q EA+++ EK LIP D +Y + LS+E +K ++P + +AS+I G+ P Sbjct: 539 GYIQKQNSEAQKMIRLEKLLIPGDLNYEKVANLSSEALDKFQKVRPKTIGEASRISGVNP 598 Query: 604 AALNLLLIYIK 614 A + +LL +IK Sbjct: 599 ADIQMLLFHIK 609 >gi|39938754|ref|NP_950520.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Onion yellows phytoplasma OY-M] gi|81170563|sp|Q6YQV5|MNMG_ONYPE RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|39721863|dbj|BAD04353.1| glucose inhibited division protein A [Onion yellows phytoplasma OY-M] Length = 617 Score = 466 bits (1199), Expect = e-129, Method: Compositional matrix adjust. Identities = 254/617 (41%), Positives = 367/617 (59%), Gaps = 12/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD IVIG GHAG EAA + AK +T LIT + S+ CNP+IGG KG +VREIDAL Sbjct: 3 YDSIVIGAGHAGVEAALILAK-KHNTLLITGSLKQVASLPCNPSIGGPAKGVVVREIDAL 61 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+M + AD A IQ ++LN KGPAVR R Q D+ Y + + NL +++G V Sbjct: 62 GGVMAKAADLAQIQIKMLNSSKGPAVRALRAQIDKLEYPQIIFEILQKTLNLTLLEGLVN 121 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + N + + + D + I TV++TTGT+L I IG K +G G + + Sbjct: 122 NLVIQNNQVQGVCLIDGTKINAKTVIITTGTYLASQILIGDTKKSSGPNGVPTTYGISTQ 181 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + F+ RLKTGTP R+ +I + +T+ Q D FSF+ Q C +T T Sbjct: 182 LKELGFEVIRLKTGTPPRVKKNSIDYSQTKIQMGDNLEQIFSFVPQTNQRPQEPCFLTHT 241 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N TH++I +++ SA+Y G ++ GPRYCPSIEDK+VRF ++N HQIF+EPE L+ D + Sbjct: 242 NQTTHQVIQKHLNQSAMYGGYVEGTGPRYCPSIEDKVVRFCDKNSHQIFIEPESLSLDEM 301 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+ST++P+ +QH+ ++TIPGL+ I + YAIEYD NP +L +LETKKI LFL Sbjct: 302 YLQGLSTSMPQHVQHEILKTIPGLQNAQITKYAYAIEYDAFNPNQLKHSLETKKIQNLFL 361 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ+NGT+GYEEAA QGL+AGIN++ K R ++YIGV+IDDL +KG EPYR Sbjct: 362 AGQMNGTSGYEEAACQGLMAGINASLKLQNKPPFVLKRNEAYIGVLIDDLITKGAKEPYR 421 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFL--RSLLKSLVL 483 + TSRAE+R+ LR DNAD RL G +LG I E+ F + N L +S +++ Sbjct: 422 LLTSRAEFRLLLRHDNADLRLKDYGYQLGLIDEKDYNNFQNKKAKINLLLEKSKNYEILV 481 Query: 484 TSKNLS----STSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 S NLS S S G+ T + L P+ + L + K + E+++I+ Sbjct: 482 NSDNLSYLKQQKSASL---GEKTTLAQLLKRPELNFCTLQHFLQE--KADKTIYEQVEIQ 536 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + EA+++ E++ IP +Y+ + LS E +EKL ++KP L QA++I Sbjct: 537 IKYEGYIAKAQKEAQKLARLEQKKIPSKINYADIKNLSKEAQEKLDLIKPQTLGQATRIL 596 Query: 600 GMTPAALNLLLIYIKKN 616 G+ +++LL+Y++K+ Sbjct: 597 GVNQVDISILLVYLEKH 613 >gi|237720610|ref|ZP_04551091.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides sp. 2_2_4] gi|229450361|gb|EEO56152.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides sp. 2_2_4] Length = 628 Score = 466 bits (1199), Expect = e-129, Method: Compositional matrix adjust. Identities = 271/623 (43%), Positives = 374/623 (60%), Gaps = 20/623 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAGCEAAA AA LG+ T LIT + IG MSCNPA+GG+ KG +VREIDAL Sbjct: 5 YDVIVIGAGHAGCEAAAAAANLGSKTCLITMDMNKIGQMSCNPAVGGIAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG V D IQFR+LN KGPA+ PR Q DR + + + ++ + NL + Q V Sbjct: 65 GGQMGLVTDETAIQFRILNRSKGPAMWSPRAQCDRAKFIWSWREKLENTPNLHIWQDTVC 124 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E ++ +V + +VLT GTFL G++H+G+ K+P GRM + S L S Sbjct: 125 ELLVENGEVTGLVTAWGVTFKAKCIVLTAGTFLNGLMHVGRHKLPGGRMAEPASYQLTES 184 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GR+KTGTP R+D +++ +D+ E Q + FSFM + +Q++C Sbjct: 185 IARHGISYGRMKTGTPVRIDARSVHFDQMETQDGESDFHKFSFMNTSTHHLKQLQCWTCY 244 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN E HRI+ E + S +++G I+S GPRYCPSIE KIV F +++ HQ+FLEPEG T Sbjct: 245 TNEEVHRILREGLPDSPLFNGQIQSIGPRYCPSIETKIVTFPDKDQHQLFLEPEGETTQE 304 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y NG S++LP EIQ ++ IP + + I RPGYAIEYDY +P +L TLE+K I LF Sbjct: 305 LYLNGFSSSLPMEIQIAALKQIPAFKDLVIYRPGYAIEYDYFDPTQLKHTLESKIIKNLF 364 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ+NGTTGYEEA QGL+AGIN+ + + +R ++YIGV+IDDL +KGV EPY Sbjct: 365 FAGQVNGTTGYEEAGGQGLIAGINAHINCHGGEAFTLARDEAYIGVLIDDLVTKGVDEPY 424 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQK--RFAKYIQEY--NFLRSLLKS 480 RMFTSRAEYRI LR D+AD RLT KLG E R + R K E +F R+ Sbjct: 425 RMFTSRAEYRILLRMDDADMRLTEKAFKLGLAKEDRYQLVRGKKEAVEQIISFARNYSMK 484 Query: 481 LVLTSKNLSSTSIS-FKQDGKTRTAYEFLSYPDFSIQNLFSICP----DARKFSSL---- 531 L + L + +Q K E L+ P +I+N+ P + K +S Sbjct: 485 PALINDALEKIGTTPLRQGCKL---IEILNRPQVTIKNIAEYVPAFQRELEKATSSDQDR 541 Query: 532 ---VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 ++E +I Y Y R+ + A+++ E I FDYS++ +LS E ++KL + Sbjct: 542 KEEILEAAEILIKYQGYIDRERMIAEKLARLESIKIKGKFDYSTIQSLSTEARQKLVKID 601 Query: 589 PFNLLQASKIEGMTPAALNLLLI 611 P + QAS+I G++P+ +N+LL+ Sbjct: 602 PETIAQASRIPGVSPSDINVLLV 624 >gi|72080345|ref|YP_287403.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Mycoplasma hyopneumoniae 7448] Length = 610 Score = 466 bits (1199), Expect = e-129, Method: Compositional matrix adjust. Identities = 265/611 (43%), Positives = 361/611 (59%), Gaps = 15/611 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D IV+GGGHAG EA K LIT + SM CNPAIGG KG + REIDAL Sbjct: 3 FDAIVVGGGHAGIEAVYALLKKKLKVVLITLDKKKLASMPCNPAIGGPAKGIITREIDAL 62 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+ G+ +D A IQ + LN KGPAV R Q D+E Y + +++ QENL +I+ V+ Sbjct: 63 GGVQGKFSDLAMIQIKYLNESKGPAVLAIRAQIDKEKYSKLILKDLKKQENLLIIEDLVS 122 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 EKN + + + TV++TTGT++ + G L IP+G G SN L N+ Sbjct: 123 ELLVEKNRVFGLKTAKKQVFFSKTVIITTGTYMDSKVLRGSLAIPSGPDGQQTSNLLSNN 182 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + F+ RLKTGTP R+ +I + K EK+ I FSF + +QI C +T T Sbjct: 183 LKRLGFELQRLKTGTPPRIFTSSIDFSKVEKEVLPVYNINFSFQSKHKLKKQISCYLTYT 242 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 +TH II +N+ S++YSG I GPRYCPSIEDKIVRF E+ HQIF EPE D++ Sbjct: 243 TAKTHDIINKNLGKSSMYSGLISGVGPRYCPSIEDKIVRFSEKPRHQIFFEPETKKQDIM 302 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG+ST++PE++Q + ++TIPGLE I + GYAIEYD +NP EL +LETKK+ GLF+ Sbjct: 303 YINGLSTSMPEDVQLEMVKTIPGLENAKIAKFGYAIEYDALNPLELKKSLETKKVKGLFM 362 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGT+GYEEAAAQGLVAGIN+ + + R D YIGV+IDDL +KG EPYR Sbjct: 363 AGQINGTSGYEEAAAQGLVAGINAGQFVLGKKPVEILRNDGYIGVLIDDLVTKGTKEPYR 422 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF-AKYIQEYNFLRSLLKSLVLT 484 M TSRAEYR+ LR DNAD R+ +K G I ++ + AKY + + L K V Sbjct: 423 MLTSRAEYRLILRNDNADIRMAKYALKSGLISKKEYLKIKAKYAKIDRKILELSKEFVSP 482 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDAR-KFSSLVIERLQIESSYA 543 L+ K+ K + +S+P+ N I PD + V+ RL+ Sbjct: 483 KDELAKKYNLEKRISKLK----LISWPNV---NFKDILPDFEFGYELTVMARLK------ 529 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y +Q EA+++ EK LIP D +Y + LS+E +K ++P + +AS+I G+ P Sbjct: 530 GYIQKQNSEAQKMIRLEKLLIPGDLNYEKVANLSSEALDKFQKVRPKTIGEASRISGVNP 589 Query: 604 AALNLLLIYIK 614 A + +LL +IK Sbjct: 590 ADIQMLLFHIK 600 >gi|255693287|ref|ZP_05416962.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides finegoldii DSM 17565] gi|260620966|gb|EEX43837.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides finegoldii DSM 17565] Length = 628 Score = 466 bits (1199), Expect = e-129, Method: Compositional matrix adjust. Identities = 269/628 (42%), Positives = 377/628 (60%), Gaps = 30/628 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAGCEAAA AA LG+ T LIT + IG MSCNPA+GG+ KG +VREIDAL Sbjct: 5 YDVIVIGAGHAGCEAAAAAANLGSKTCLITMDMNKIGQMSCNPAVGGIAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG V D IQFR+LN KGPA+ PR Q DR + + + + + NL + Q V Sbjct: 65 GGQMGLVTDETAIQFRILNRSKGPAMWSPRAQCDRAKFIWSWRERLENTPNLHIWQDTVC 124 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E ++ +V + +VLT GTFL G++HIG+ K+P GRM + S L S Sbjct: 125 ELLVENGEVTGLVTVWGVTFKAKCIVLTAGTFLNGLMHIGRHKLPGGRMAEPASYQLTES 184 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GR+KTGTP R+D +++ +D+ E Q + FSFM + + +Q++C Sbjct: 185 IARHGITYGRMKTGTPVRIDARSVHFDRMETQDGECDFHKFSFMNTSVRHLKQLQCWTCY 244 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN E HRI+ E + S +++G I+S GPRYCPSIE KIV F +++ HQ+FLEPEG T Sbjct: 245 TNEEVHRILREGLPDSPLFNGQIQSIGPRYCPSIETKIVTFPDKSQHQLFLEPEGETTQE 304 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y NG S++LP +IQ ++ IP + + I RPGYAIEYDY +P +L TLE+K I LF Sbjct: 305 LYLNGFSSSLPMDIQIAALKQIPAFKDLVIYRPGYAIEYDYFDPTQLKHTLESKIIKNLF 364 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ+NGTTGYEEA QGL+AGIN+ + + +R ++YIGV+IDDL +KGV EPY Sbjct: 365 FAGQVNGTTGYEEAGGQGLIAGINAHINCHGGEAFTLARDEAYIGVLIDDLVTKGVDEPY 424 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQK----------RFAKYIQEYNFL 474 RMFTSRAEYRI LR D+AD RLT +LG E R + + + Q Y+ Sbjct: 425 RMFTSRAEYRILLRMDDADMRLTERAYQLGLAKENRYQLMKSKKGTVEQIVSFAQNYSMK 484 Query: 475 RSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICP----DARKFSS 530 +L+ + K + +T + +Q K E L+ P +I+N+ P + K +S Sbjct: 485 PALINDAL---KKIGTTPL--RQGCKL---IEILNRPQVTIENISEHIPAFQRELEKATS 536 Query: 531 L-------VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEK 583 +IE +I Y Y R+ + A+++ E I FDY+S+ +LS E ++K Sbjct: 537 SDEGRKEEIIEAAEILIKYQGYIDRERMIAEKLARLESIKIKGKFDYASIQSLSTEARQK 596 Query: 584 LSILKPFNLLQASKIEGMTPAALNLLLI 611 L + P + QAS+I G++P+ +N+LL+ Sbjct: 597 LVKIDPETIAQASRIPGVSPSDINVLLV 624 >gi|166222942|sp|Q4A909|MNMG_MYCH7 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|144575231|gb|AAZ53380.2| glucose inhibited division protein A [Mycoplasma hyopneumoniae 7448] Length = 619 Score = 466 bits (1199), Expect = e-129, Method: Compositional matrix adjust. Identities = 265/611 (43%), Positives = 361/611 (59%), Gaps = 15/611 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D IV+GGGHAG EA K LIT + SM CNPAIGG KG + REIDAL Sbjct: 12 FDAIVVGGGHAGIEAVYALLKKKLKVVLITLDKKKLASMPCNPAIGGPAKGIITREIDAL 71 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+ G+ +D A IQ + LN KGPAV R Q D+E Y + +++ QENL +I+ V+ Sbjct: 72 GGVQGKFSDLAMIQIKYLNESKGPAVLAIRAQIDKEKYSKLILKDLKKQENLLIIEDLVS 131 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 EKN + + + TV++TTGT++ + G L IP+G G SN L N+ Sbjct: 132 ELLVEKNRVFGLKTAKKQVFFSKTVIITTGTYMDSKVLRGSLAIPSGPDGQQTSNLLSNN 191 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + F+ RLKTGTP R+ +I + K EK+ I FSF + +QI C +T T Sbjct: 192 LKRLGFELQRLKTGTPPRIFTSSIDFSKVEKEVLPVYNINFSFQSKHKLKKQISCYLTYT 251 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 +TH II +N+ S++YSG I GPRYCPSIEDKIVRF E+ HQIF EPE D++ Sbjct: 252 TAKTHDIINKNLGKSSMYSGLISGVGPRYCPSIEDKIVRFSEKPRHQIFFEPETKKQDIM 311 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG+ST++PE++Q + ++TIPGLE I + GYAIEYD +NP EL +LETKK+ GLF+ Sbjct: 312 YINGLSTSMPEDVQLEMVKTIPGLENAKIAKFGYAIEYDALNPLELKKSLETKKVKGLFM 371 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGT+GYEEAAAQGLVAGIN+ + + R D YIGV+IDDL +KG EPYR Sbjct: 372 AGQINGTSGYEEAAAQGLVAGINAGQFVLGKKPVEILRNDGYIGVLIDDLVTKGTKEPYR 431 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF-AKYIQEYNFLRSLLKSLVLT 484 M TSRAEYR+ LR DNAD R+ +K G I ++ + AKY + + L K V Sbjct: 432 MLTSRAEYRLILRNDNADIRMAKYALKSGLISKKEYLKIKAKYAKIDRKILELSKEFVSP 491 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDAR-KFSSLVIERLQIESSYA 543 L+ K+ K + +S+P+ N I PD + V+ RL+ Sbjct: 492 KDELAKKYNLEKRISKLK----LISWPNV---NFKDILPDFEFGYELTVMARLK------ 538 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y +Q EA+++ EK LIP D +Y + LS+E +K ++P + +AS+I G+ P Sbjct: 539 GYIQKQNSEAQKMIRLEKLLIPGDLNYEKVANLSSEALDKFQKVRPKTIGEASRISGVNP 598 Query: 604 AALNLLLIYIK 614 A + +LL +IK Sbjct: 599 ADIQMLLFHIK 609 >gi|160883398|ref|ZP_02064401.1| hypothetical protein BACOVA_01367 [Bacteroides ovatus ATCC 8483] gi|260172652|ref|ZP_05759064.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides sp. D2] gi|315920943|ref|ZP_07917183.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides sp. D2] gi|156111118|gb|EDO12863.1| hypothetical protein BACOVA_01367 [Bacteroides ovatus ATCC 8483] gi|313694818|gb|EFS31653.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides sp. D2] Length = 628 Score = 466 bits (1199), Expect = e-129, Method: Compositional matrix adjust. Identities = 271/623 (43%), Positives = 374/623 (60%), Gaps = 20/623 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAGCEAAA AA LG+ T LIT + IG MSCNPA+GG+ KG +VREIDAL Sbjct: 5 YDVIVIGAGHAGCEAAAAAANLGSKTCLITMDMNKIGQMSCNPAVGGIAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG V D IQFR+LN KGPA+ PR Q DR + + + ++ + NL + Q V Sbjct: 65 GGQMGLVTDETAIQFRILNRSKGPAMWSPRAQCDRAKFIWSWREKLENTPNLHIWQDTVC 124 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E ++ +V + +VLT GTFL G++H+G+ K+P GRM + S L S Sbjct: 125 ELLVENGEVTGLVTAWGVTFKAKCIVLTAGTFLNGLMHVGRHKLPGGRMAEPASYQLTES 184 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GR+KTGTP R+D +++ +D+ E Q + FSFM + +Q++C Sbjct: 185 IARHGITYGRMKTGTPVRIDARSVHFDQMETQDGESDFHKFSFMNTSTRHLKQLQCWTCY 244 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN E HRI+ E + S +++G I+S GPRYCPSIE KIV F +++ HQ+FLEPEG T Sbjct: 245 TNEEVHRILREGLPDSPLFNGQIQSIGPRYCPSIETKIVTFPDKDQHQLFLEPEGETTQE 304 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y NG S++LP EIQ ++ IP + + I RPGYAIEYDY +P +L TLE+K I LF Sbjct: 305 LYLNGFSSSLPMEIQIAALKQIPAFKDLVIYRPGYAIEYDYFDPTQLKHTLESKIIKNLF 364 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ+NGTTGYEEA QGL+AGIN+ + + +R ++YIGV+IDDL +KGV EPY Sbjct: 365 FAGQVNGTTGYEEAGGQGLIAGINAHINCHGGEAFTLARDEAYIGVLIDDLVTKGVDEPY 424 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQK--RFAKYIQEY--NFLRSLLKS 480 RMFTSRAEYRI LR D+AD RLT KLG E R + R K E +F R+ Sbjct: 425 RMFTSRAEYRILLRMDDADMRLTEKAFKLGLAKEDRYQLVRGKKEAVEQIISFARNYSMK 484 Query: 481 LVLTSKNLSSTSIS-FKQDGKTRTAYEFLSYPDFSIQNLFSICP----DARKFSSL---- 531 L + L + +Q K E L+ P +I+N+ P + K +S Sbjct: 485 PALINDALERIGTTPLRQGCKL---IEILNRPQVTIENIAEYVPAFQRELEKATSSDQDR 541 Query: 532 ---VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 ++E +I Y Y R+ + A+++ E I FDYS++ +LS E ++KL + Sbjct: 542 KEEILEAAEILIKYQGYIDRERMIAEKLARLESIKIKGKFDYSTIQSLSTEARQKLVKID 601 Query: 589 PFNLLQASKIEGMTPAALNLLLI 611 P + QAS+I G++P+ +N+LL+ Sbjct: 602 PETIAQASRIPGVSPSDINVLLV 624 >gi|256419795|ref|YP_003120448.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Chitinophaga pinensis DSM 2588] gi|256034703|gb|ACU58247.1| glucose inhibited division protein A [Chitinophaga pinensis DSM 2588] Length = 622 Score = 466 bits (1198), Expect = e-129, Method: Compositional matrix adjust. Identities = 274/630 (43%), Positives = 381/630 (60%), Gaps = 30/630 (4%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+G GHAGCEAAA AA +G+ L+T TI MSCNPA+GG+ KG +VREIDA Sbjct: 4 SYDVIVVGAGHAGCEAAAAAANMGSKVLLVTMNMQTIAQMSCNPAMGGIAKGQIVREIDA 63 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQE-NLDVIQGE 123 L G G + D + IQFR+LN KGPA+ PRTQ DR L+ A RE L Q N+D Q Sbjct: 64 LGGYSGIITDQSMIQFRMLNRSKGPAMWSPRTQNDRMLF-AAKWREALEQTPNVDFYQDM 122 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V G + +V I+ +VVLT GTFL GV+HIG + GR+ + + + Sbjct: 123 VKGLLVKDGRCYGVVTGLGHEIKAKSVVLTNGTFLNGVMHIGDKQFGGGRVAEKAATGIT 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKIT-NRQIECG 241 + F++ RLKTGTP R+D +++ + K E+Q D+ + FS++ +KI +Q C Sbjct: 183 EQLVSLGFESDRLKTGTPPRIDARSLDYSKMEEQPGDDVITGFSYLDVEKIKPEQQRSCH 242 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT T+ + H ++ S ++ G I+ GPRYCPSIEDKI RF ER+ HQ+F+EPEG N Sbjct: 243 ITYTSDKVHEMLKTGFDRSPMFQGRIQGVGPRYCPSIEDKINRFAERDRHQLFVEPEGWN 302 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T +Y NG ST+LPE++Q++ ++ +PG E V + RPGYAIEYDY P +L +LETK I Sbjct: 303 TVEIYVNGFSTSLPEDVQYKALQLVPGFENVKMFRPGYAIEYDYFPPTQLQFSLETKHIQ 362 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 LF AGQINGTTGYEEAA QGL+AGIN+ K++ R+++YIGV+IDDL +KG Sbjct: 363 NLFFAGQINGTTGYEEAACQGLMAGINAHLKASGQAPFVLKRSEAYIGVLIDDLINKGTD 422 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYI---QEYNFLRSLL 478 EPYRMFTSRAE+R LR DNAD RLT ++G RQ R K I + ++++L Sbjct: 423 EPYRMFTSRAEFRTLLRQDNADLRLTEQSFEMGLA---RQNRLDKVIVKKEGVEKIKAIL 479 Query: 479 KSL---------VLTSKNLSSTSISFKQDGKTRTAYEFLSYPD---FSIQN-LFSICPDA 525 K L +L KN S + AY+ L P FS++N + I Sbjct: 480 KELPVDPEEINHLLAEKNTSPLPQRMR-------AYQILLRPTMDIFSMKNHVAKIGKAL 532 Query: 526 RKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 +F +E+ +I+ Y Y ++ K + E LIP FDY+ L +LS E ++K + Sbjct: 533 AEFGDETLEQAEIQIKYEVYIEKENDLVKRMSQMEDLLIPDGFDYTKLVSLSAEARQKFN 592 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 ++P L QAS+I G+ P+ + +L++Y+ + Sbjct: 593 KIRPRTLGQASRISGVNPSDVQILMVYMGR 622 >gi|47458989|ref|YP_015851.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Mycoplasma mobile 163K] gi|81170559|sp|Q6KID6|MNMG_MYCMO RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|47458317|gb|AAT27640.1| glucose inhibited division protein a [Mycoplasma mobile 163K] Length = 611 Score = 466 bits (1198), Expect = e-129, Method: Compositional matrix adjust. Identities = 254/628 (40%), Positives = 375/628 (59%), Gaps = 29/628 (4%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M + YD IVIGGGHAG EAA + +K + ALI+ + + SM CNP+IGG KG + R Sbjct: 1 MAAKIYDAIVIGGGHAGVEAAFILSKKNFNVALISLNQNRLASMPCNPSIGGPAKGIITR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G AD A IQ ++LN KGPAVR R Q D+E Y + + + +N+D+I Sbjct: 61 EIDALGGKQAYFADQAMIQIKMLNTSKGPAVRAIRAQIDKEKYSQIILKAVQETKNIDLI 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 + V T+ N IS ++ + N ++ T ++T GT+L I G+ K +G G+ SN Sbjct: 121 EDMVFEIQTKDNKISGVITEKNGLLETKTAIITAGTYLDSYILRGEEKYSSGPDGEKTSN 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 SL NS +K F RLKTGTP R+ +I + + E++ E + FS K ++QI C Sbjct: 181 SLSNSLIKLGFKLLRLKTGTPPRIYANSIDFSEVEEEILPESNLNFSIYHSKKLSKQIHC 240 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +T T+ +TH+II++NI S++YSG IK GPRYCPS+EDKIVRF ++ HQIF EPE + Sbjct: 241 YLTYTSEKTHQIILDNINKSSMYSGLIKGIGPRYCPSVEDKIVRFKDKERHQIFFEPETI 300 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 D++Y NG+ST++P ++Q Q I++I GL+ + + YAIEYD I+P +L +LE+K+I Sbjct: 301 KADIMYINGLSTSMPIDVQDQMIKSINGLKNAKVAKYAYAIEYDAIDPLQLKKSLESKEI 360 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 LF AGQINGT+GYEEAA QGL+AGIN++ K + + R+DSYIGV+IDDLT+KG Sbjct: 361 ENLFFAGQINGTSGYEEAAGQGLLAGINASLKLENREALNLKRSDSYIGVLIDDLTTKGT 420 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRM TSRAEYR+ LR DNAD RL + ++AK + + + K Sbjct: 421 KEPYRMLTSRAEYRLLLRNDNADIRLL------------KYAKYAKTLTDKEIATTEAKY 468 Query: 481 LVLTSK--NLSSTSISF------KQDGKTRTAY-EFLSYPDFSIQNLFSICPDARKFSSL 531 ++T K L + IS K + T++ + +S + I+ + P Sbjct: 469 DLITKKIAELENQYISINDPLAKKYNLANSTSFLQLISRHEIDIKEIVGNFP-------- 520 Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 +E L Y +Q+ +A ++ E +P+D +Y ++ L+ E ++KL ++KP Sbjct: 521 FLEELSTNVRLDGYIKKQLSQADKMLRLENLKLPEDLNYDNVVNLAFEARQKLKMIKPLT 580 Query: 592 LLQASKIEGMTPAALNLLLIYIKKNTVK 619 + QAS+I G+ PA + +L+ ++ VK Sbjct: 581 IGQASRISGINPADIQMLMFHLNLKVVK 608 >gi|71893362|ref|YP_278808.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Mycoplasma hyopneumoniae J] Length = 610 Score = 466 bits (1198), Expect = e-129, Method: Compositional matrix adjust. Identities = 265/611 (43%), Positives = 361/611 (59%), Gaps = 15/611 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D IV+GGGHAG EA K LIT + SM CNPAIGG KG + REIDAL Sbjct: 3 FDAIVVGGGHAGIEAVYALLKKKLKVVLITLDKKKLASMPCNPAIGGPAKGIITREIDAL 62 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+ G+ +D A IQ + LN KGPAV R Q D+E Y + +++ QENL +I+ V+ Sbjct: 63 GGVQGKFSDLAMIQIKYLNESKGPAVLAIRAQIDKEKYSKLILKDLKKQENLLIIEDLVS 122 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 EKN + + + TV++TTGT++ + G L IP+G G SN L N+ Sbjct: 123 ELLVEKNRVFGLKTAKKQVFFSKTVIITTGTYMDSKVLRGSLAIPSGPDGQQTSNLLSNN 182 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + F+ RLKTGTP R+ +I + K EK+ I FSF + +QI C +T T Sbjct: 183 LKRLGFELQRLKTGTPPRIFTSSIDFSKVEKEVLPVYNINFSFQSKHKIKKQISCYLTYT 242 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 +TH II +N+ S++YSG I GPRYCPSIEDKIVRF E+ HQIF EPE D++ Sbjct: 243 TAKTHDIINKNLGKSSMYSGLISGVGPRYCPSIEDKIVRFSEKPRHQIFFEPETKKQDIM 302 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG+ST++PE++Q + ++TIPGLE I + GYAIEYD +NP EL +LETKK+ GLF+ Sbjct: 303 YINGLSTSMPEDVQLEMVKTIPGLENAKIAKFGYAIEYDALNPLELKKSLETKKVKGLFM 362 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGT+GYEEAAAQGLVAGIN+ + + R D YIGV+IDDL +KG EPYR Sbjct: 363 AGQINGTSGYEEAAAQGLVAGINAGQFVLGKKPVEILRNDGYIGVLIDDLVTKGTKEPYR 422 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF-AKYIQEYNFLRSLLKSLVLT 484 M TSRAEYR+ LR DNAD R+ +K G I ++ + AKY + + L K V Sbjct: 423 MLTSRAEYRLILRNDNADIRMAKYALKSGLISKKEYLKIKAKYAKIDRKILELSKEFVSP 482 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDAR-KFSSLVIERLQIESSYA 543 L+ K+ K + +S+P+ N I PD + V+ RL+ Sbjct: 483 KDELAKKYNLEKRISKLK----LISWPNV---NFKDILPDFEFGYELTVMARLK------ 529 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y +Q EA+++ EK LIP D +Y + LS+E +K ++P + +AS+I G+ P Sbjct: 530 GYIQKQNSEAQKMIRLEKLLIPGDLNYEKVANLSSEALDKFQKVRPKTIGEASRISGVNP 589 Query: 604 AALNLLLIYIK 614 A + +LL +IK Sbjct: 590 ADIQMLLFHIK 600 >gi|221126291|ref|XP_002164847.1| PREDICTED: similar to predicted protein, partial [Hydra magnipapillata] Length = 607 Score = 466 bits (1198), Expect = e-129, Method: Compositional matrix adjust. Identities = 257/600 (42%), Positives = 353/600 (58%), Gaps = 39/600 (6%) Query: 57 HLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQEN 116 HLV+E+DA+ G M D AGIQFR+LN KGPAVR R QADR LY+ A++R + +Q N Sbjct: 1 HLVKEVDAMGGAMALATDEAGIQFRILNSSKGPAVRATRAQADRVLYKAAIRRMLENQPN 60 Query: 117 LDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGD 176 L + Q V E + + V Q R TVVLT GTFL G IH+G AGR GD Sbjct: 61 LSLFQQAVDDLMVEGDRVVGAVTQVGIRFRGKTVVLTAGTFLDGKIHVGLNNYAAGRAGD 120 Query: 177 SPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFAD------ERLIPF-SFM 229 P+ SL + GRLKTGTP R+DG++I + K +Q D ++P SFM Sbjct: 121 PPAVSLSARLKELKLPQGRLKTGTPPRIDGRSIDFSKCIEQPGDGVPGGMSDVMPVVSFM 180 Query: 230 TD-KITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGER 288 + + +Q+ C IT TN TH II S +++G I+ GPRYCPS+EDKI RF ++ Sbjct: 181 GNVAMHPQQVPCWITHTNERTHDIIRSGFDRSPMFTGKIEGVGPRYCPSVEDKINRFADK 240 Query: 289 NGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINP 348 + HQIFLEPEGL T YPNGIST+LP +IQ++ +R++ GLE +I+RPGYAIEYDY +P Sbjct: 241 DSHQIFLEPEGLTTHEYYPNGISTSLPFDIQYELVRSMAGLENAHILRPGYAIEYDYFDP 300 Query: 349 KELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYI 408 + L + ET++I GLF AGQINGTTGYEEAAAQG+ AGIN+A + D R +Y+ Sbjct: 301 RSLKGSFETRQIGGLFFAGQINGTTGYEEAAAQGMFAGINAALQVYSDDTWLPGRDQAYL 360 Query: 409 GVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYI 468 GV++DDL +KGV EPYRMFTSRAE+R+ LR DNAD RLT +G +LG + R F + Sbjct: 361 GVLVDDLITKGVTEPYRMFTSRAEFRLQLREDNADARLTEVGRELGLVDNARWDAFCRKR 420 Query: 469 QEYNFLRSLLKSLVLTSKNLS---STSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA 525 + L+S + +NL+ S + K + L P+ S L S+ D Sbjct: 421 DAVSRETERLRSTWVNPRNLAADESERVLGKSIEHEYNLADLLRRPNVSYGGLMSL--DH 478 Query: 526 RKFSS--------------------------LVIERLQIESSYAAYTGRQMIEAKEIKFE 559 K+++ V+E+++I + Y+ Y RQ E + Sbjct: 479 GKYANRDLLDVVSRETAGLPTVDAAEVAFVAAVVEQVEIAAKYSGYINRQKDEVERAAHY 538 Query: 560 EKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 E +P D DY + ALS E +++LS +P L QAS++ G+TPA ++LL+I++KK + Sbjct: 539 ENLRLPDDLDYMQVTALSIEARQRLSKYRPETLGQASRLSGITPATISLLMIHLKKGNFR 598 >gi|258569531|ref|XP_002543569.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Uncinocarpus reesii 1704] gi|237903839|gb|EEP78240.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Uncinocarpus reesii 1704] Length = 680 Score = 465 bits (1197), Expect = e-129, Method: Compositional matrix adjust. Identities = 266/625 (42%), Positives = 374/625 (59%), Gaps = 22/625 (3%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R +DV+VIGGGHAG EA A AA+ GA TAL+T S IG SCNP+ GG+GKG ++RE+D Sbjct: 35 RPFDVVVIGGGHAGSEACAAAARSGARTALVTPSRSNIGVCSCNPSFGGIGKGTMIREVD 94 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPR-TQADRELYR-LAMQREILSQENLDVIQ 121 ALDG+ GR+ D AGIQFRVLN KG + G + ++ R+LY+ + R + + L +++ Sbjct: 95 ALDGVAGRIVDKAGIQFRVLNRSKGSRLSGAQGSRLIRDLYKQYKLGRVVRPIQGLSIVE 154 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G+VA + + + + R V RG P+GRMG++ + Sbjct: 155 GKVADIVLSREDLENTPGRKRQNCRRQVRV-------RGSHSNWACVFPSGRMGEAATFG 207 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT---NRQI 238 L S F GRLKTGTP RLD KTI + E Q D PFSF+ D + Q+ Sbjct: 208 LSKSLRDAGFQLGRLKTGTPPRLDRKTIDFSTLEVQPGDSPPPPFSFLNDTVAVGDEDQL 267 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C T TN + H I+ N+ S +K GPRYCPS+E KI+RF ++ H I+LEPE Sbjct: 268 ACWSTYTNEKAHAIVTANLDKSVHIRETVK--GPRYCPSLESKIIRFKDKLRHMIWLEPE 325 Query: 299 GLN-TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 G DV+YPNGIS +P + Q++ ++TI GLE V +++PGY +EYDY++P+ L PTLET Sbjct: 326 GFAPNDVIYPNGISMTIPADAQYEMLKTIQGLEHVKMLQPGYGVEYDYVDPRSLKPTLET 385 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 K ISGL+LAGQINGTTGYEEAA QG++AGIN+ S + SR+D +IG+M+DDL + Sbjct: 386 KLISGLYLAGQINGTTGYEEAAGQGILAGINAGLASQSKAPLTLSRSDGFIGIMVDDLIT 445 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL 477 KGV EPYRMFT+R+EYRIS R DNAD RLT +G G I ++R K F++ ++ L++L Sbjct: 446 KGVTEPYRMFTTRSEYRISTRADNADLRLTEMGRAAGVITDKRWKHFSETKEQLVELQTL 505 Query: 478 LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYP----DFSIQNLFS---ICPDARKFSS 530 L++ S S D R+A++ L D IQ+L S + F Sbjct: 506 LENTKYPSTIWSRKGFRVHTDSSLRSAFDLLCLNNANIDTIIQHLTSPTGLPYTTDSFDP 565 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 + R+ IE +Y+ Y RQ A+ +E L+P D DYS + LS E + L ++P Sbjct: 566 KIKARIAIEGTYSPYVKRQANSARIFARDEALLLPPDLDYSKIHGLSTEERHALERVRPE 625 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 ++ A +IEG+TP+ LL+++++ Sbjct: 626 SVGMARRIEGVTPSGALKLLLHVRR 650 >gi|88801788|ref|ZP_01117316.1| glucose-inhibited division protein A [Polaribacter irgensii 23-P] gi|88782446|gb|EAR13623.1| glucose-inhibited division protein A [Polaribacter irgensii 23-P] Length = 625 Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust. Identities = 267/623 (42%), Positives = 369/623 (59%), Gaps = 22/623 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAAA +A +GA T LIT I MSCNPA+GG+ KG +VREIDAL Sbjct: 8 FDVIVVGGGHAGSEAAAASANMGAHTLLITTNLQNIAQMSCNPAMGGIAKGQIVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G G V D IQF++LN KGPA+ PR Q+DR + + + E LD Q V Sbjct: 68 GGYSGIVTDKTAIQFKMLNKSKGPAMWSPRVQSDRMQFSECWRTMLEQTEKLDFYQDSVN 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + N I + I+ TV++T GTFL G+IHIG+ GR G+ S + + Sbjct: 128 ELLFDGNKIIGVKTALGLEIKAKTVIITAGTFLNGLIHIGEKSFGGGRAGEGASTGITEA 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQIECGITR 244 +K F++GR+KTGTP R+D +++ + K +Q DE FS + + K Q C +T Sbjct: 188 LVKKGFESGRMKTGTPPRVDSRSLDFSKMIEQPGDEITEKFSHLPSTKALTEQRSCYLTY 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN + H ++ E S +++G IKS GPRYCPS+EDKI RF ++ HQIF+EPEG T Sbjct: 248 TNPKVHELLREGFDRSPMFNGRIKSTGPRYCPSVEDKIDRFATKDRHQIFVEPEGWTTVE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y NG ST+LPE+IQ + IR I G E V +R GYAIEYD+ P +L +LETK I LF Sbjct: 308 MYVNGFSTSLPEDIQDKAIRAIEGFENVKFLRYGYAIEYDFFQPTQLKHSLETKLIENLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+A K+ R ++YIGV+IDDL +KG EPY Sbjct: 368 FAGQINGTTGYEEAAAQGLMAGVNAALKTQGKAPFILKRNEAYIGVLIDDLITKGTEEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL--- 481 RMFTSRAEYR LR DNAD RLTP+G KLG + R R + ++ L L Sbjct: 428 RMFTSRAEYRTLLRQDNADLRLTPLGYKLGLASQERMDRMLEKQKKTALLIQFLNETSVK 487 Query: 482 ------VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICP-----DARKFSS 530 +L++K L+ + S K ++ + P S+ + + + Sbjct: 488 QEEVNPILSAKGLALVNQSMK-------LFKVAARPQLSLSDFMHLTKLKDFLHEHVIQA 540 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 IE+ QI Y+ Y ++ A ++ E +IP F Y + +LS E EKL+ +KP Sbjct: 541 DAIEQAQIHLKYSGYIDKEKNNADKLNRLENVVIPSSFIYEKVKSLSFEATEKLNKVKPT 600 Query: 591 NLLQASKIEGMTPAALNLLLIYI 613 ++ QAS+I G++P+ +++LL+Y+ Sbjct: 601 SISQASRISGVSPSDISVLLVYM 623 >gi|332879861|ref|ZP_08447550.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332682238|gb|EGJ55146.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 623 Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust. Identities = 268/626 (42%), Positives = 376/626 (60%), Gaps = 14/626 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M YDVIV+G GHAG EAAA AA +GA T LIT I MSCNPA+GG+ KG +VR Sbjct: 1 MFTTEYDVIVVGAGHAGAEAAAAAANMGAKTLLITMNLQHIAQMSCNPAVGGIAKGQIVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G MG + D IQF++LN KGPA+ PR Q+DR + A + ++ S LD Sbjct: 61 EIDALGGYMGIITDKTAIQFKMLNQSKGPAMWSPRAQSDRMRFSEAWRLQLESLPTLDFF 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 QG V EK+ + + I+ +VVLT GTFL GV+HIG + GR G+ + Sbjct: 121 QGMVNDLLIEKHKVVGVRTSLGISIKAKSVVLTNGTFLNGVMHIGMKQFGGGRAGEPAAY 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSF-MTDKITNRQIE 239 + ++ F+ GR+KTGTP R+D +++ + K Q DE FSF + Q + Sbjct: 181 GITECLVQQGFEAGRMKTGTPPRVDARSLDFSKMIPQPGDEHPQKFSFSAATQPLQVQKD 240 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +T T+ H I+ S ++ G I GPRYCPSIEDKI RF +++ HQIF+EPEG Sbjct: 241 CYMTYTSERVHNILRTGFDRSPMFQGIIHGVGPRYCPSIEDKINRFADKDRHQIFVEPEG 300 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 +T +Y NG ST+LPEE+Q+ + + G EKV +RPGYAIEYDY P +L TLETK Sbjct: 301 WHTVEMYVNGFSTSLPEEVQYAALSQVVGFEKVKFLRPGYAIEYDYFPPTQLKHTLETKL 360 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I L+ AGQINGTTGYEEAAAQGL+AGIN+ K + + + R +YIGV+IDDL +KG Sbjct: 361 IEHLYFAGQINGTTGYEEAAAQGLMAGINAVLKIREREPLILKRDQAYIGVLIDDLITKG 420 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR LR DNAD+RLTPIG ++G + E R + + Q + + +K Sbjct: 421 TEEPYRMFTSRAEYRTLLRQDNADSRLTPIGYEIGTVSEERYRAWEAKEQRVDDFITYIK 480 Query: 480 SLVLTSKNLSST-----SISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIE 534 L +T + ++ S KQ K + + L+ P ++ + + +R + + Sbjct: 481 ELSVTPEEVNPILEKYDSSPMKQGDKLQ---KVLTRPSVTLSDFEQLSKVSRYIAEHDLS 537 Query: 535 R-----LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 + ++ YA Y ++ A ++ E IP++FDY + +LS E +EKL ++P Sbjct: 538 QEEKTCAEVAIKYAGYIEKEKNNADKLNRLESVRIPENFDYDKIVSLSFEGREKLKKIRP 597 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKK 615 L QAS+I G++PA +++L+IY+ + Sbjct: 598 ITLSQASRISGVSPADISVLVIYMGR 623 >gi|255074319|ref|XP_002500834.1| predicted protein [Micromonas sp. RCC299] gi|226516097|gb|ACO62092.1| predicted protein [Micromonas sp. RCC299] Length = 731 Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust. Identities = 259/616 (42%), Positives = 362/616 (58%), Gaps = 37/616 (6%) Query: 40 TIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQAD 99 ++G MSCNP+IGGL KG LVREIDAL G+MG ADA+GIQFRVLN KGPAVRGPR Q D Sbjct: 95 SVGEMSCNPSIGGLAKGALVREIDALGGIMGAAADASGIQFRVLNASKGPAVRGPRAQMD 154 Query: 100 RELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLR 159 R Y+ ++Q + N++V+ + A ++ ++ + D I VV+ TGTFLR Sbjct: 155 RTTYKRSVQAMLFGTPNVEVV--DAAAYDLITCAVAGVETADGRKITAEAVVVATGTFLR 212 Query: 160 GVIHIGKLKIPAGRM----GDSP-------SNSLFNSFMKFDFDTGRLKTGTPARLDGKT 208 GV+H+G +IPAGRM ++P +++L + F GRLKTGTP RLDG + Sbjct: 213 GVLHVGGRRIPAGRMPTAITENPDATAARGAHALADRLYGLGFQMGRLKTGTPPRLDGAS 272 Query: 209 IIWDKTEKQFADERLIPFSFMTDKI---TNRQIECGITRTNLETHRIIMENIKHSAIYSG 265 I + E+Q DE PF F+ DK +Q+ C TRTN ET R++ E+ G Sbjct: 273 IDYSGLEEQRGDEPPRPFGFLHDKAWVPPMKQVSCWATRTNAETERVMKESRGFLNFEGG 332 Query: 266 DI-KSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIR 324 + ++ GPRYCPS+E K+ RF R+ H ++LEPEGL+TDVVYPNG+S L E Q +R Sbjct: 333 ENGEAIGPRYCPSLEMKVKRFPGRS-HIVWLEPEGLDTDVVYPNGLSNTLDEPDQIAMLR 391 Query: 325 TIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLV 384 T+ GLE V ++RPGY +EYDY++P+EL TLETK++ GLF AGQINGTTGYEEAAAQGLV Sbjct: 392 TVAGLENVKMLRPGYGVEYDYVDPRELRWTLETKRVGGLFFAGQINGTTGYEEAAAQGLV 451 Query: 385 AGINSARKS------NKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLR 438 AG N+A + + L R SY+GV++DDLT +G EPYRMF+SR E+R+S+R Sbjct: 452 AGANAAATALSRLGMDALPPSIVGRGASYLGVLVDDLTRRGTSEPYRMFSSRVEHRLSVR 511 Query: 439 PDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSIS---F 495 PDNAD RLT G G + R + + + L+ + ++ ++ + Sbjct: 512 PDNADQRLTAAGELAGLVDSARALIARRRGDATDRAIAALEDARMGAQAWAAHGVDNAPA 571 Query: 496 KQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVI----------ERLQIESSYAAY 545 + G+T +A E L+ P + S +A K + + +E YA Y Sbjct: 572 GKSGRTVSAAELLAIPGVGYARVTSALAEAGKTTGESTASGGIDDSRADSATVECYYAPY 631 Query: 546 TGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAA 605 RQ + + ++ EE +P D DY ++ LS E +EKL +P L A +I G+TP+A Sbjct: 632 LARQRRDVETMRKEEAMELPMDLDYDAVGGLSAEDREKLKEFRPATLAAAQRISGVTPSA 691 Query: 606 LNLLLIYIKKNTVKLN 621 L ++ +K N Sbjct: 692 AIALFRFVAAQKLKGN 707 >gi|312600976|gb|ADQ90231.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Mycoplasma hyopneumoniae 168] Length = 619 Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust. Identities = 264/611 (43%), Positives = 361/611 (59%), Gaps = 15/611 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D IV+GGGHAG EA K LIT + SM CNPAIGG KG + REIDAL Sbjct: 12 FDAIVVGGGHAGIEAVYALLKKKLKVVLITLDKKKLASMPCNPAIGGPAKGIITREIDAL 71 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+ G+ +D A IQ + LN KGPAV R Q D+E Y + +++ QENL +I+ V+ Sbjct: 72 GGVQGKFSDLAMIQIKYLNESKGPAVLAIRAQIDKEKYSKLILKDLKKQENLLIIEDLVS 131 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 EKN + + + TV++TTGT++ + G L IP+G G SN L N+ Sbjct: 132 ELLVEKNRVFGLKTAKKQVFFSKTVIITTGTYMDSKVLRGSLAIPSGPDGQQTSNLLSNN 191 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + F+ RLKTGTP R+ +I + + EK+ I FSF + +QI C +T T Sbjct: 192 LKRLGFELQRLKTGTPPRIFTSSIDFSRVEKEVLPVYNINFSFQSKHKLKKQISCYLTYT 251 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 +TH II +N+ S++YSG I GPRYCPSIEDKIVRF E+ HQIF EPE D++ Sbjct: 252 TAKTHDIINKNLGKSSMYSGLISGVGPRYCPSIEDKIVRFSEKPRHQIFFEPETKKQDIM 311 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG+ST++PE++Q + ++TIPGLE I + GYAIEYD +NP EL +LETKK+ GLF+ Sbjct: 312 YINGLSTSMPEDVQLEMVKTIPGLENAKIAKFGYAIEYDALNPLELKKSLETKKVKGLFM 371 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGT+GYEEAAAQGLVAGIN+ + + R D YIGV+IDDL +KG EPYR Sbjct: 372 AGQINGTSGYEEAAAQGLVAGINAGQFVLGKKPVEILRNDGYIGVLIDDLVTKGTKEPYR 431 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF-AKYIQEYNFLRSLLKSLVLT 484 M TSRAEYR+ LR DNAD R+ +K G I ++ + AKY + + L K V Sbjct: 432 MLTSRAEYRLILRNDNADIRMAKYALKSGLISKKEYLKIKAKYAKIDRKILELSKEFVSP 491 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDAR-KFSSLVIERLQIESSYA 543 L+ K+ K + +S+P+ N I PD + V+ RL+ Sbjct: 492 KDELAKKYNLEKRISKLK----LISWPNV---NFKDILPDFEFGYELTVMARLK------ 538 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y +Q EA+++ EK LIP D +Y + LS+E +K ++P + +AS+I G+ P Sbjct: 539 GYIQKQNSEAQKMIRLEKLLIPGDLNYEKVANLSSEALDKFQKVRPKTIGEASRISGVNP 598 Query: 604 AALNLLLIYIK 614 A + +LL +IK Sbjct: 599 ADIQMLLFHIK 609 >gi|319900537|ref|YP_004160265.1| glucose inhibited division protein A [Bacteroides helcogenes P 36-108] gi|319415568|gb|ADV42679.1| glucose inhibited division protein A [Bacteroides helcogenes P 36-108] Length = 624 Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust. Identities = 271/624 (43%), Positives = 378/624 (60%), Gaps = 26/624 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAGCEAAA AA +G+ T LIT + IG MSCNPA+GG+ KG +VREIDAL Sbjct: 5 YDVIVIGAGHAGCEAAAAAANMGSKTCLITMDMNKIGQMSCNPAVGGIAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG V D IQFR+LN KGPA+ PR Q DR + A + + + NL + Q V Sbjct: 65 GGYMGLVTDRTAIQFRILNRSKGPAMWSPRAQCDRNKFIWAWREILENTPNLHIWQDTVR 124 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + +V +VLT GTFL G++H+G+ +P GRM + S L S Sbjct: 125 EILVENGEVVGLVTFWGVTFHAKCIVLTAGTFLNGLMHVGRTMLPGGRMAEPASYELTES 184 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 K GR+KTGTP R+DG+++ ++ + Q + FSFM + + +Q+ C Sbjct: 185 IAKHGITYGRMKTGTPVRIDGRSVHYELMDIQDGENDFHKFSFMNTGVRHLKQLPCWTCF 244 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN ETH I+ E + S +++G I+S GPRYCPSIE KIV F ++ HQ+FLEPEG T Sbjct: 245 TNEETHHILREGLPDSPLFNGQIQSIGPRYCPSIETKIVTFPDKPQHQLFLEPEGETTQE 304 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y NG S++LP +IQ ++ IP + + I RPGYAIEYDY +P +L TLETKKI LF Sbjct: 305 LYLNGFSSSLPMDIQIAALKKIPAFKDLIIYRPGYAIEYDYFDPTQLKHTLETKKIKNLF 364 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ+NGTTGYEEAA QG++AGIN+ + + +R ++YIGV+IDDL +KGV EPY Sbjct: 365 FAGQVNGTTGYEEAAGQGIIAGINAHINCHGGEPFTLARDEAYIGVLIDDLVTKGVDEPY 424 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGER-----RQKRFA-----KYIQEYNFL 474 RMFTSRAEYRI LR D+AD RLT KLG + E RQKR A + ++Y+ Sbjct: 425 RMFTSRAEYRILLRMDDADMRLTEKAWKLGLVKEDRYELLRQKREAVSHIINFARDYSMK 484 Query: 475 RSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNL-FSICPDARKFSSL-- 531 +L+ ++ + L +T + +Q K + ++ P +I N+ + R+ + Sbjct: 485 PTLINPIL---EQLGTTPL--RQGCKL---IDLINRPQITIDNMAVHVSALKRELDKVND 536 Query: 532 ----VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSIL 587 +IE +I Y Y GR+ I A ++ E I FDY+S+ +LS E ++KL+ + Sbjct: 537 RKEEIIEAAEILIKYEGYIGRERIIADKLARLESIKIKGKFDYNSIQSLSTEARQKLTKI 596 Query: 588 KPFNLLQASKIEGMTPAALNLLLI 611 P + QAS+I G++P+ +N+LL+ Sbjct: 597 DPETIAQASRIPGISPSDVNVLLV 620 >gi|300727531|ref|ZP_07060922.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prevotella bryantii B14] gi|299775234|gb|EFI71835.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prevotella bryantii B14] Length = 623 Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust. Identities = 251/623 (40%), Positives = 366/623 (58%), Gaps = 15/623 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIGGGHAGCEAAA +A +GA T L+T + IG MSCNPA+GG+ KG +VREIDA Sbjct: 4 NYDVIVIGGGHAGCEAAAASANMGAKTCLVTMDMNKIGQMSCNPAVGGIAKGQIVREIDA 63 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG V D IQFR+LN+ KGPAV PR Q DR + + + + NL + Q + Sbjct: 64 LGGQMGLVTDKTAIQFRMLNIGKGPAVWSPRAQCDRGKFIWEWRTVLDNTPNLKIWQDQA 123 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + ++++T GTFL G++HIG+ + GR + ++ Sbjct: 124 DKLLVENGEAIGVHTIWGVELYAKSIIVTAGTFLNGLMHIGRKMVEGGRCAEPAVHNFTE 183 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S ++ + R+KTGTP R+D +++ ++ + Q D FS+M +Q+ C T Sbjct: 184 SITRWGITSARMKTGTPVRIDKRSVHFEDMDVQDGDSDFHQFSYMGPHRVLQQLPCWTTY 243 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN E H + E + S +++G I+S GPRYCPSIE K+V F ++ H +FLEPEG +T+ Sbjct: 244 TNKEVHDTLKEGLADSPLFNGQIQSTGPRYCPSIETKLVTFPDKEQHPLFLEPEGEDTNE 303 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y NG S+++P ++Q IR I V I RPGYAIEYDY +P +L +LE+K I GLF Sbjct: 304 MYLNGFSSSMPMDVQLNAIRKIRAFRDVEIYRPGYAIEYDYFDPTQLKHSLESKIIKGLF 363 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ+NGTTGYEEA QG +AGIN+A N + R +SYIGV+IDDL +KGV EPY Sbjct: 364 FAGQVNGTTGYEEAGGQGTIAGINAAIYCNNGEPFIMKRDESYIGVLIDDLVTKGVDEPY 423 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYRI LR D+AD RLT LG R + + Q + L + + + Sbjct: 424 RMFTSRAEYRILLRQDDADARLTEKAYHLGIAKRDRYDWWIQKKQAVDELIQFCEQMPIK 483 Query: 485 SKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSL-------V 532 +K+++S + G T + ++ P ++QNL I P ++ + + Sbjct: 484 AKDINS---QLEALGTTPLRAGCKLIDLIARPHLNLQNLAEIIPALKEKLHMPENRKEEI 540 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 E +I+ Y Y R+ I A+++ E I F+Y+ L +S E ++KL+ + P L Sbjct: 541 AEAAEIKMKYKGYIEREKIVAEKMHRLENIKIKGRFNYAELHEISTEGRQKLTKIDPETL 600 Query: 593 LQASKIEGMTPAALNLLLIYIKK 615 QAS+I G++P+ +N+LL+ + + Sbjct: 601 AQASRIPGVSPSDINVLLVLLGR 623 >gi|15828724|ref|NP_326084.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Mycoplasma pulmonis UAB CTIP] gi|21263679|sp|Q98QV8|MNMG_MYCPU RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|14089666|emb|CAC13426.1| GLUCOSE INHIBITED DIVISION PROTEIN A [Mycoplasma pulmonis] Length = 611 Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust. Identities = 258/616 (41%), Positives = 361/616 (58%), Gaps = 17/616 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 MI +++DVIVIGGGHAG EA AK+ ALIT IG+M CNP+IGG KG + + Sbjct: 1 MIRKNFDVIVIGGGHAGVEATFALAKMNLKVALITIYKDKIGAMPCNPSIGGPAKGIITK 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G+ G AD A IQ ++LN KGP+VR R Q D+E Y + +++L EN+ + Sbjct: 61 EIDALGGVQGYYADKAMIQVKMLNESKGPSVRAIRAQIDKEKYSEIIVKDLLQNENVTIF 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 + E + I + ++ N I + VV+TTGT++ I G G G+ Sbjct: 121 EDFATDLIVENDQIVGVELEKNKTISSNLVVMTTGTYMNSRILRGSDIEHTGPNGEKTGI 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 L + + F+ RLKTGTP R+ +I + K E++ D FS ++ ++QI C Sbjct: 181 GLSKALERLGFELIRLKTGTPPRIYSDSIDFSKVEEEVLDVNGYVFSPRSNVKIDKQIHC 240 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +T TN +TH+II +NI SA+YS I+ GPRYCPS+EDKI++F ++ HQIF EPE Sbjct: 241 YLTYTNEKTHKIIQDNINKSAMYSQLIEGTGPRYCPSVEDKIMKFADKERHQIFFEPETS 300 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 D++Y NG+ST+ P E+Q Q ++TIPGLE + GYAIEYD INP +L +LE+KKI Sbjct: 301 RQDIMYINGLSTSFPVEVQKQIVKTIPGLENARVKIWGYAIEYDAINPLQLKKSLESKKI 360 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLFLAGQINGT+GYEEAAAQGL+AGIN+ K D I R YIGV+IDDL +KG Sbjct: 361 KGLFLAGQINGTSGYEEAAAQGLIAGINAGLKFKGEDEIVIQRNHGYIGVLIDDLVTKGT 420 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRM TSRAEYR+ LR DN D RL G+K I Q+ + K +++Y + ++ Sbjct: 421 QEPYRMLTSRAEYRLLLRNDNVDIRLAHYGLKAHLIS---QQDYQKILEKYKKIDEKIEE 477 Query: 481 LVLTSKNLSSTSISFKQDGKTRTA---YEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 L S+ F Q K ++ L+ PD +L + F L + Sbjct: 478 L---KTKFVSSKTDFAQKYKIENGISYFQALTRPDIEPSDLI------KDFEFL--NEMT 526 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ Y +Q A +++ E IP+ DYS + L+NE +EK + ++P + QAS+ Sbjct: 527 IQIRLEGYIKKQNNAAAKMERLENLKIPEKIDYSQILNLANEAREKFNKIRPQTIGQASR 586 Query: 598 IEGMTPAALNLLLIYI 613 I G+ PA + +LL Y+ Sbjct: 587 ISGINPADIQMLLFYL 602 >gi|205831495|sp|Q2NJ23|MNMG_AYWBP RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A Length = 618 Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust. Identities = 253/618 (40%), Positives = 369/618 (59%), Gaps = 13/618 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD IVIG GHAG E+A + AK +T LIT + S+ CNP+IGG KG +VREIDAL Sbjct: 3 YDSIVIGAGHAGIESALILAK-KHNTLLITGSLKQVASLPCNPSIGGPAKGVVVREIDAL 61 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+M + D A IQ ++LN KGPAVR R Q D+ Y + + + NL +++G V Sbjct: 62 GGIMAKATDLAQIQIKMLNSSKGPAVRALRAQIDKLEYPQIILEILQNTPNLTLLEGLVN 121 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 +KN + + + D I TV++TTGT+L I IG K +G G + + Sbjct: 122 NLIIQKNQVQGVCLIDGRKINAKTVIITTGTYLASQILIGDTKKASGPNGVPTTYGISTQ 181 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + F+ RLKTGTP R+ +I + +T+ Q D F F+T + T R Q C +T Sbjct: 182 LKEIGFEVIRLKTGTPPRVKKNSIDYSQTKIQMGDNLEQTFGFLTPQTTKRPQEPCFLTH 241 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH++I +++ SA+Y G ++ GPRYCPSIEDK+VRF ++N HQIF+EPE L + Sbjct: 242 TNQTTHQVIRKHLNQSAMYGGYVEGIGPRYCPSIEDKVVRFCDKNSHQIFIEPESLYLNE 301 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+ST++P+ +QH+ ++TIPGL+ I + YAIEYD NP +L +LETKKI LF Sbjct: 302 MYLQGLSTSMPQHVQHEILKTIPGLQNAKITKYAYAIEYDAFNPNQLKHSLETKKIQNLF 361 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQ+NGT+GYEEAA QGL+AGIN++ K R ++YIGV+IDDL +KG EPY Sbjct: 362 LAGQMNGTSGYEEAACQGLMAGINASLKLQNKPPFVLKRNEAYIGVLIDDLITKGAKEPY 421 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFL--RSLLKSLV 482 R+ TSRAE+R+ LR DNAD RL G +LG I ++ F + N L +S ++ Sbjct: 422 RLLTSRAEFRLLLRHDNADLRLKDYGYQLGLIDKKDYNSFQNKKAKINLLLEKSKNYEIL 481 Query: 483 LTSKNLS----STSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 + S NLS S S G+ T + + P+ + L + K + E+++I Sbjct: 482 VNSDNLSYLKQQNSASL---GEKTTLAQLIKRPELNFCTLQHFLQE--KADKTIYEQVEI 536 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + Y Y + EA+++ E++ IP +Y+ + LS E KEKL ++KP L QA++I Sbjct: 537 QIKYEGYIAKAQKEAQKLARLEQKKIPSKINYADIKNLSKEAKEKLDLIKPQTLGQATRI 596 Query: 599 EGMTPAALNLLLIYIKKN 616 G+ +++LL+Y++K+ Sbjct: 597 LGVNQVDISILLVYLEKH 614 >gi|85057733|ref|YP_456649.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Aster yellows witches'-broom phytoplasma AYWB] gi|84789838|gb|ABC65570.1| glucose inhibited division protein A [Aster yellows witches'-broom phytoplasma AYWB] Length = 634 Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust. Identities = 253/618 (40%), Positives = 369/618 (59%), Gaps = 13/618 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD IVIG GHAG E+A + AK +T LIT + S+ CNP+IGG KG +VREIDAL Sbjct: 19 YDSIVIGAGHAGIESALILAK-KHNTLLITGSLKQVASLPCNPSIGGPAKGVVVREIDAL 77 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+M + D A IQ ++LN KGPAVR R Q D+ Y + + + NL +++G V Sbjct: 78 GGIMAKATDLAQIQIKMLNSSKGPAVRALRAQIDKLEYPQIILEILQNTPNLTLLEGLVN 137 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 +KN + + + D I TV++TTGT+L I IG K +G G + + Sbjct: 138 NLIIQKNQVQGVCLIDGRKINAKTVIITTGTYLASQILIGDTKKASGPNGVPTTYGISTQ 197 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + F+ RLKTGTP R+ +I + +T+ Q D F F+T + T R Q C +T Sbjct: 198 LKEIGFEVIRLKTGTPPRVKKNSIDYSQTKIQMGDNLEQTFGFLTPQTTKRPQEPCFLTH 257 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH++I +++ SA+Y G ++ GPRYCPSIEDK+VRF ++N HQIF+EPE L + Sbjct: 258 TNQTTHQVIRKHLNQSAMYGGYVEGIGPRYCPSIEDKVVRFCDKNSHQIFIEPESLYLNE 317 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+ST++P+ +QH+ ++TIPGL+ I + YAIEYD NP +L +LETKKI LF Sbjct: 318 MYLQGLSTSMPQHVQHEILKTIPGLQNAKITKYAYAIEYDAFNPNQLKHSLETKKIQNLF 377 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQ+NGT+GYEEAA QGL+AGIN++ K R ++YIGV+IDDL +KG EPY Sbjct: 378 LAGQMNGTSGYEEAACQGLMAGINASLKLQNKPPFVLKRNEAYIGVLIDDLITKGAKEPY 437 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFL--RSLLKSLV 482 R+ TSRAE+R+ LR DNAD RL G +LG I ++ F + N L +S ++ Sbjct: 438 RLLTSRAEFRLLLRHDNADLRLKDYGYQLGLIDKKDYNSFQNKKAKINLLLEKSKNYEIL 497 Query: 483 LTSKNLS----STSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 + S NLS S S G+ T + + P+ + L + K + E+++I Sbjct: 498 VNSDNLSYLKQQNSASL---GEKTTLAQLIKRPELNFCTLQHFLQE--KADKTIYEQVEI 552 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + Y Y + EA+++ E++ IP +Y+ + LS E KEKL ++KP L QA++I Sbjct: 553 QIKYEGYIAKAQKEAQKLARLEQKKIPSKINYADIKNLSKEAKEKLDLIKPQTLGQATRI 612 Query: 599 EGMTPAALNLLLIYIKKN 616 G+ +++LL+Y++K+ Sbjct: 613 LGVNQVDISILLVYLEKH 630 >gi|313204555|ref|YP_004043212.1| glucose inhibited division protein a [Paludibacter propionicigenes WB4] gi|312443871|gb|ADQ80227.1| glucose inhibited division protein A [Paludibacter propionicigenes WB4] Length = 624 Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust. Identities = 259/622 (41%), Positives = 373/622 (59%), Gaps = 14/622 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAG EAA AA +G+ T LIT + IG MSCNPA+GG+ KG +VREIDAL Sbjct: 5 YDVIVIGAGHAGNEAACAAANMGSKTLLITMDMNKIGQMSCNPAVGGIAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG + D + IQFR+LN KGPA+ PR+Q+DR + I + NL V Q V Sbjct: 65 GGQMGIITDRSAIQFRMLNRSKGPAMWSPRSQSDRHQFIQHWISTITNIPNLYVWQDTVK 124 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E ++ ++ R +VVLT GTFL G++H GK ++ GR+ + S + Sbjct: 125 ELVIENGEVTGLISALGVHFRAKSVVLTAGTFLGGLMHFGKNQLVGGRISEPASFGITEQ 184 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGITR 244 F T R+KTGTP R+DG++I + K +Q + FSF+ + K +Q C IT Sbjct: 185 LKSIGFTTDRMKTGTPCRIDGRSIDFSKMSEQKGENDFHKFSFLEEAKRELKQESCWITN 244 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH + + + S +++G I+S GPRYCPSIE KIV F ++ HQ+FLEPEG+++ Sbjct: 245 TNQTTHDELRKGLADSPLFNGQIQSIGPRYCPSIETKIVTFADKISHQLFLEPEGVDSQE 304 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 Y NG S++LP +Q I TI GLE + RPGYAIEYD+ +P +L TLETK+I LF Sbjct: 305 YYLNGFSSSLPLRVQIDAIHTIQGLENAQLFRPGYAIEYDFFDPTQLKHTLETKRIKNLF 364 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ+NGTTGYEEA QGL+AGIN+ +R ++YIGV+IDDL +KGV EPY Sbjct: 365 FAGQVNGTTGYEEAGGQGLIAGINAHINCMGGKEFTLARNEAYIGVLIDDLVTKGVDEPY 424 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL--- 481 RMFTSRAEYR+ LR D+AD RLT G ++G R ++ I++ N L +K+ Sbjct: 425 RMFTSRAEYRLILRQDDADVRLTGKGYEIGLATNNRFQQLNTKIEKQNILTEFIKNYSIK 484 Query: 482 -VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDAR-KFSSL------VI 533 ++ L+S + S + G + + + P SI++L P + K ++ ++ Sbjct: 485 PAFINEFLASRNSSELKHGCKLS--DLVLRPQLSIEDLSEAIPALKEKIEAIGSRKEEIV 542 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E ++ Y Y R+ + A +++ E I DY+++ +LS E ++KLS + P + Sbjct: 543 EATEVLLKYEGYIEREKLIADKLQRLEHINIRGRIDYNTIQSLSTEARQKLSKIDPETIG 602 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I G++P+ +N+LL+ + + Sbjct: 603 QASRIPGISPSDVNILLVLLGR 624 >gi|298484266|ref|ZP_07002430.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides sp. D22] gi|298269591|gb|EFI11188.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides sp. D22] Length = 628 Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust. Identities = 269/623 (43%), Positives = 374/623 (60%), Gaps = 20/623 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAGCEAAA AA LG+ T LIT + IG MSCNPA+GG+ KG +VREIDAL Sbjct: 5 YDVIVIGAGHAGCEAAAAAANLGSKTCLITMDMNKIGQMSCNPAVGGIAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG V D IQFR+LN KGPA+ PR Q DR + + + ++ + NL + Q V Sbjct: 65 GGQMGLVTDETAIQFRILNRSKGPAMWSPRAQCDRAKFIWSWREKLENTPNLHIWQDTVC 124 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E ++ +V + +VLT GTFL G++H+G+ ++P GRM + S L S Sbjct: 125 ELLVENGEVTGLVTAWGVTFKAKCIVLTAGTFLNGLMHVGRHQLPGGRMAEPASYQLTES 184 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GR+KTGTP R+D +++ +D+ E Q + FSFM + +Q++C Sbjct: 185 IARHGITYGRMKTGTPVRIDARSVHFDQMETQAGECDFHKFSFMNTSTHHLKQLQCWTCY 244 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN E HRI+ E + S +++G I+S GPRYCPSIE KIV F +++ HQ+FLEPEG T Sbjct: 245 TNEEVHRILREGLPDSPLFNGQIQSIGPRYCPSIETKIVTFPDKDQHQLFLEPEGETTQE 304 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y NG S++LP EIQ ++ IP + + I RPGYAIEYDY +P +L TLE+K I LF Sbjct: 305 LYLNGFSSSLPMEIQIAALKQIPAFKDLVIYRPGYAIEYDYFDPTQLKHTLESKIIKNLF 364 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ+NGTTGYEEA QGLVAGIN+ + + +R ++Y GV+IDDL +KGV EPY Sbjct: 365 FAGQVNGTTGYEEAGGQGLVAGINAHINCHGGEAFTLARDEAYTGVLIDDLVTKGVDEPY 424 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQK--RFAKYIQE--YNFLRSLLKS 480 RMFTSRAEYRI LR D+AD RLT KLG + R + R K E +F R+ Sbjct: 425 RMFTSRAEYRILLRMDDADMRLTEKAFKLGLAKKDRYQLVRSKKEAVEQIVSFARNYSMK 484 Query: 481 LVLTSKNLSSTSIS-FKQDGKTRTAYEFLSYPDFSIQNLFSICP----DARKFSSL---- 531 L + L + +Q K E L+ P +I+N+ P + K +S Sbjct: 485 PALINDALEKIGTTPLRQGCKL---IEILNRPQVTIENIIEHVPAFQRELEKATSSDQDR 541 Query: 532 ---VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 ++E +I Y Y R+ + A+++ E I FDYS++ +LS E ++KL+ + Sbjct: 542 KEEILEAAEILIKYQGYIDRERMIAEKLARLESIKIKGKFDYSTIQSLSTEARQKLAKID 601 Query: 589 PFNLLQASKIEGMTPAALNLLLI 611 P + QAS+I G++P+ +N+LL+ Sbjct: 602 PETIAQASRIPGVSPSDINVLLV 624 >gi|218258581|ref|ZP_03474924.1| hypothetical protein PRABACTJOHN_00579 [Parabacteroides johnsonii DSM 18315] gi|218225351|gb|EEC98001.1| hypothetical protein PRABACTJOHN_00579 [Parabacteroides johnsonii DSM 18315] Length = 625 Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust. Identities = 260/626 (41%), Positives = 366/626 (58%), Gaps = 19/626 (3%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAGCEAAA +A LG+ T LIT + I MSCNPA+GG+ KG +VREIDA Sbjct: 4 NYDVIVVGAGHAGCEAAAASANLGSKTLLITMDMNKIAQMSCNPAVGGIAKGQIVREIDA 63 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ-ENLDVIQGE 123 L G MG V D IQFR+LN KGPA+ PR+Q+DR + + R IL NL + Q Sbjct: 64 LGGYMGIVTDRTAIQFRMLNQSKGPAMWSPRSQSDRARF-IECWRGILENLPNLYIWQDT 122 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + N I + +VVLT GTFL G++HIG+ +I GR+ + + L Sbjct: 123 VRELLLDGNTICGVKTDMGVEFHAKSVVLTNGTFLNGLMHIGRTQIRGGRIAEPAAFGLT 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQIECGI 242 + + R+KTGTP R+D +++ +D+ +Q + FS+M T +Q+ C Sbjct: 183 EQLVSLGIKSERMKTGTPVRIDARSVHFDEMAEQPGENDFHKFSYMDTSHRVLKQLSCWT 242 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN H ++ E + S +Y+G I+S GPRYCPSIE KIV F ++ HQ+FLEPEG T Sbjct: 243 TFTNEACHAVLREGLPDSPLYNGQIRSIGPRYCPSIETKIVTFADKPQHQLFLEPEGETT 302 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 Y NG S++LP EIQ + ++ IP + I RPGYAIEYD+ +P +L LETK+I Sbjct: 303 QEYYLNGFSSSLPLEIQLRALQQIPAFRDIQIYRPGYAIEYDFFDPTQLHHNLETKQIRN 362 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEA QGLVAGIN+ + + R ++YIGV+IDDL +KGV E Sbjct: 363 LFFAGQINGTTGYEEAGGQGLVAGINAHINCHGGEPFVLGRDEAYIGVLIDDLVTKGVDE 422 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYRI LR D+AD RLT LG + R + + + + + Sbjct: 423 PYRMFTSRAEYRILLRQDDADMRLTEKSYALGLAKQDRYDLLNEKKTSRDAIIAFAANYS 482 Query: 483 LTSKNLSSTSISFKQDGKTRTAY-----EFLSYPDFSIQNLFSICPDAR--------KFS 529 + + ++S + G T A+ E + P +++N+ + P R Sbjct: 483 IKPQYINS---GLETLGTTPLAHGCKLIELIPRPQITLENIAELVPAFRAELDKVPVSRK 539 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 +IE +I Y+ Y R+ I A +I E I FDY+S+ +LS E ++KL+ + P Sbjct: 540 EEIIEAAEILIKYSGYIRREQIIADKINRLENIHIKGKFDYNSIQSLSTEARQKLTRIDP 599 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKK 615 + QAS+I G++P+ +N+LL+ + + Sbjct: 600 DTIAQASRIPGISPSDINILLVLLGR 625 >gi|167764036|ref|ZP_02436163.1| hypothetical protein BACSTE_02419 [Bacteroides stercoris ATCC 43183] gi|167698152|gb|EDS14731.1| hypothetical protein BACSTE_02419 [Bacteroides stercoris ATCC 43183] Length = 638 Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust. Identities = 274/631 (43%), Positives = 379/631 (60%), Gaps = 34/631 (5%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAGCEAAA AA LG+ T LIT + IG MSCNPA+GG+ KG +VREIDAL Sbjct: 13 YDVIVIGAGHAGCEAAAAAANLGSKTCLITMDMNKIGQMSCNPAVGGIAKGQIVREIDAL 72 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ-ENLDVIQGEV 124 G MG V D IQFR+LN KGPA+ PR Q DR + + REIL NL + Q V Sbjct: 73 GGYMGLVTDKTAIQFRILNRSKGPAMWSPRAQCDRNKF-IWTWREILENIPNLHIWQDTV 131 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ + R VVLT GTFL G++H+G+ +P GRM + S L Sbjct: 132 QEILVENGEVTGLTTVWGVTFRAKCVVLTAGTFLNGLMHVGRTMLPGGRMAEPASYQLTE 191 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 S + GR+KTGTP R+DG+++ ++ E Q + FSFM + + + +Q+ C Sbjct: 192 SIARHGITYGRMKTGTPVRIDGRSVHYEDMEIQEGENDFHKFSFMNNGVRHLKQLPCWTC 251 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN ETHRI+ E + S +++G I+S GPRYCPSIE KIV F ++ HQ+FLEPEG T Sbjct: 252 FTNEETHRILREGLPDSPLFNGQIQSIGPRYCPSIETKIVTFPDKEQHQLFLEPEGETTQ 311 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y NG S++LP +IQ ++ IP + I RPGYAIEYDY +P +L TLETKKI L Sbjct: 312 ELYLNGFSSSLPMDIQIAALKKIPAFRDLVIYRPGYAIEYDYFDPTQLKHTLETKKIKNL 371 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ+NGTTGYEEAA QG++AGIN+ + + +R ++YIGV+IDDL +KGV EP Sbjct: 372 FFAGQVNGTTGYEEAAGQGIIAGINAHINCHGGEPFTLARDEAYIGVLIDDLVTKGVDEP 431 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR-----QKRFA-----KYIQEYNF 473 YRMFTSRAEYRI LR D+AD RLT KLG E R KR A ++ + Y+ Sbjct: 432 YRMFTSRAEYRILLRMDDADMRLTERAWKLGLAKEDRYELLKSKREAVTSIIEFTRSYSM 491 Query: 474 LRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSL- 531 +L+ ++ + L +T + +Q K + ++ P +++N+ + R+ + Sbjct: 492 KPALINPVL---EQLGTTPL--RQGCKL---VDLINRPQVTLENMAEHVSAFRRELDKIT 543 Query: 532 -----------VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNEL 580 ++E +I Y Y GR+ I A ++ E I FDY+S+ +LS E Sbjct: 544 EQDKVADRRDEIVEAAEILIKYEGYIGRERIIADKLARLESIKIKGRFDYNSIQSLSTEA 603 Query: 581 KEKLSILKPFNLLQASKIEGMTPAALNLLLI 611 ++KL + P + QAS+I G++P+ +N+LL+ Sbjct: 604 RQKLVKIDPETIAQASRIPGVSPSDINVLLV 634 >gi|308804970|ref|XP_003079797.1| GLUCOSE INHIBITED DIVISION PROTEIN A (ISS) [Ostreococcus tauri] gi|116058254|emb|CAL53443.1| GLUCOSE INHIBITED DIVISION PROTEIN A (ISS) [Ostreococcus tauri] Length = 920 Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust. Identities = 271/606 (44%), Positives = 366/606 (60%), Gaps = 52/606 (8%) Query: 40 TIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQAD 99 TIG MSCNP++GGLGKG LVRE+DALDGLMGR+ADA+GIQFRVLN KGPAVRG R Q D Sbjct: 314 TIGEMSCNPSVGGLGKGTLVREVDALDGLMGRIADASGIQFRVLNSSKGPAVRGARAQMD 373 Query: 100 RELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLR 159 RELY+ R + L+V E G + +++ +R TVV+TTGTFL Sbjct: 374 RELYKKEALRLVSGIGGLEVSSNEGGGR------VRGVMLDTGRALRSRTVVITTGTFLN 427 Query: 160 GVIHIGKLKIPAGRMGDS-----------PSNSLFNSFMKFDFDTGRLKTGTPARLDGKT 208 GV+HIG ++ AGR+ ++ ++SL + FD GR+KTGTP RLDG + Sbjct: 428 GVLHIGSKRVVAGRLANASTENADVQAGKAAHSLAKTLYGVGFDMGRMKTGTPPRLDGNS 487 Query: 209 IIWDKTEKQFADERLIPFSFMTD---------KITNRQIECGITRTNLETHRIIMENIKH 259 I W + Q DE IPF+F + + T QI C T T ET + I K Sbjct: 488 IDWAACQPQPGDELPIPFTFTSSSRRVGAEPWRPTAPQIMCHSTYTTPETEKFIAAAPKS 547 Query: 260 SAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQ 319 + PRYCPSIE K+ RF RN H+++LEPEGLNT VVYPNGI+ L ++Q Sbjct: 548 KYELDMEGSPTTPRYCPSIESKVRRFPGRN-HRVWLEPEGLNTSVVYPNGITNNLEPDLQ 606 Query: 320 HQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAA 379 + +RTIPGLEKV+I++PGY +EYDY++P+EL LETKK+ GLFLAGQINGTTGYEEAA Sbjct: 607 VKMVRTIPGLEKVDILKPGYGVEYDYVDPRELKINLETKKVRGLFLAGQINGTTGYEEAA 666 Query: 380 AQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRP 439 AQG++AG N+A S + R SY+GV++DDLTS+G EPYRMF+SR EYR+S+R Sbjct: 667 AQGIIAGANAA--STDGEEFILPRYSSYLGVLVDDLTSRGTSEPYRMFSSRVEYRLSIRS 724 Query: 440 DNADNRLTPIGMKLGCIGERRQ----------KRFAKYIQEYNFLRSLLKS------LVL 483 DNAD RLT +G + G + R K+ ++ + + L S +S + Sbjct: 725 DNADLRLTELGERFGLVSAERARAGARRSALVKQASEALDAISLLPSRWQSYAPDLPIAK 784 Query: 484 TSKNLSSTSI---SFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + LS++++ + D R A + L D +Q L ++ + R E IE+ Sbjct: 785 HGRPLSASNMLSQRWDIDEILRAATDALGASDARVQVLHAVNGEDRS----AFECAAIEA 840 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ + ++I+ EE+ +IP FDYS++ LS E +EKL ++P +AS+I G Sbjct: 841 YYRPYVERQAQDIEDIRREEELVIPDAFDYSTIDNLSLEDREKLEAVRPTTFARASRISG 900 Query: 601 MTPAAL 606 +TPAAL Sbjct: 901 VTPAAL 906 >gi|110004173|emb|CAK98511.1| probable glucose inhibited division protein a [Spiroplasma citri] Length = 626 Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust. Identities = 250/630 (39%), Positives = 364/630 (57%), Gaps = 18/630 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIG GHAG EA+ AA++ T L+T I M CNP+IGG KG +VREID Sbjct: 2 KKYDVIVIGAGHAGVEASLAAARMQKKTLLVTLHKDKIALMPCNPSIGGPAKGIVVREID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 A+ G M + ADA +Q ++LN +GPAV R Q+D+ Y MQ+ I Q+NLD+ +G Sbjct: 62 AIGGEMAKAADATALQMKLLNSSRGPAVWALRAQSDKIQYAKYMQKVIEKQDNLDLYEGA 121 Query: 124 VAGFNTEK-NIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 V + N ++++D + V+LTTGT+++ ++ G K G GD + L Sbjct: 122 VQSLLVDDDNNCYGVMLKDQTQFFAKKVILTTGTYMQSLVLQGMTKKAEGPDGDITTAGL 181 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--NRQIEC 240 F+ RLKTGTPAR+ +I + K + + + + FS+ T T Q C Sbjct: 182 STQLKHLGFELFRLKTGTPARVLNTSIDYSKAQPEQGSDLQLAFSYSTKTFTPLEEQELC 241 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 + + +TH I+ N+ SA+YSG++K GPRYCPS EDKIVRF ++ HQIFLEPE Sbjct: 242 WLIHSTPKTHSIVQNNLTASAMYSGNVKGTGPRYCPSFEDKIVRFADKPRHQIFLEPESK 301 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + + +Y G ST++P ++Q + +R++PG E V +++ YAIEYD + P +L TLETKKI Sbjct: 302 SLNTIYVQGFSTSMPIDVQEKMLRSLPGFENVEVLKWAYAIEYDAVVPTQLKHTLETKKI 361 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 L+ AGQINGT+GYEEAA QGL+AGIN+ ++ + R +YIGV+IDDL +KG Sbjct: 362 KNLYTAGQINGTSGYEEAACQGLMAGINAVLSIDQKEPFILRRDQAYIGVLIDDLITKGT 421 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYR+ TSRAEYR+ LR DN++ RL +LG I ++ + +Q YN + LLK Sbjct: 422 EEPYRLLTSRAEYRLLLRNDNSEERLKNYAYQLGLIDQKSWTEYQNNVQSYNEVMQLLKE 481 Query: 481 LVLTSK--------NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV 532 T+K NL T I+ + G Y L P+ ++ L P S + Sbjct: 482 TYFTAKSPLIQKLANLGVTKITERISG-----YNLLKRPNIELKYLEDELPPLNNLKSFL 536 Query: 533 IERLQIESSYAAYTGR-QMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 + L I + Y + Q I K IK E K LIP + +Y + L+ E +EK ++P + Sbjct: 537 KQNLLINIRFEGYIKKEQEIALKTIKLENK-LIPANLNYDLVDNLALEAREKFKKIRPIS 595 Query: 592 LLQASKIEGMTPAALNLLLIYIKKNTVKLN 621 + QA++I G+ PA + +LL ++KK + N Sbjct: 596 IGQANRISGINPADIQMLLFHLKKMELDAN 625 >gi|288928687|ref|ZP_06422533.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prevotella sp. oral taxon 317 str. F0108] gi|288329671|gb|EFC68256.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prevotella sp. oral taxon 317 str. F0108] Length = 623 Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust. Identities = 255/627 (40%), Positives = 370/627 (59%), Gaps = 16/627 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 MI R YDV+VIGGGHAGCEAA AAKLGA T L+T + I MSCNPA+GG+ KG +VR Sbjct: 1 MIFR-YDVLVIGGGHAGCEAACAAAKLGAKTCLVTMDMNKIAQMSCNPAVGGIAKGQIVR 59 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DAL G MG + D+ IQFR+LN KGPAV PR Q DR + + + S E LD+ Sbjct: 60 EVDALGGEMGIITDSTSIQFRMLNKGKGPAVWSPRAQCDRAKFITKWRETLDSTEGLDIW 119 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q + E + + + R ++V+T GTFL G++H+GK++IP GR + Sbjct: 120 QDQADELLVEDGMAVGVRTLWGAEFRAKSIVVTAGTFLNGLMHVGKVQIPGGRCAEPAVY 179 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 S + R+KTGTP R+D +T+ +++ E+Q + FS+M T Q+ C Sbjct: 180 RFSESIARHGITVDRMKTGTPVRIDARTVHFEEMERQDGEIDFHQFSYMPTPRTLTQLPC 239 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 T E H+ + I S +++G I+S GPRYCPSIE K+V F ++ H +FLEPEG Sbjct: 240 WTFYTTQEAHQALQAGIADSPLFNGQIQSTGPRYCPSIETKLVTFPDKEQHPLFLEPEGE 299 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 NT +Y NG S+++P ++Q +R IP L RPGYAIEYDY +P L +LE+K + Sbjct: 300 NTAEMYLNGFSSSMPLDVQLNALRKIPALRDAKAYRPGYAIEYDYFDPTLLHASLESKVV 359 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLFLAGQ+NGTTGYEEAA QGLVAGIN+A ++ + R +SYIGV+IDDLT+KGV Sbjct: 360 KGLFLAGQVNGTTGYEEAAGQGLVAGINAAIACSRGEPFVMKRDESYIGVLIDDLTTKGV 419 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYRI LR D+AD RLT ++G + R+ ++++ + ++ Sbjct: 420 DEPYRMFTSRAEYRILLRQDDADARLTERAYQIGLA---TRHRYDHWMEKKESIERIISF 476 Query: 481 LVLTSKNLSSTSISFKQDGKT-----RTAYEFLSYPDFSIQNLFSICPDARKF------- 528 TS + + + ++ G T + ++ P ++ L P+ + Sbjct: 477 CETTSVKANDINAALERWGTTPLNGSAKLADLIARPQLNLLVLADAVPELKAAIAQIPNR 536 Query: 529 SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 ++E +I+ Y Y R+ I A +++ E I F+Y L +S E ++KL+ + Sbjct: 537 QEEIVEAAEIKMKYKGYIEREKIVADKMRRLENIRIKGHFNYEELHEISTEGRQKLARIN 596 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIKK 615 P L QAS+I G++P+ +N+LL+ + + Sbjct: 597 PETLAQASRIPGVSPSDINVLLVLMNR 623 >gi|54019972|ref|YP_115518.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Mycoplasma hyopneumoniae 232] gi|81170558|sp|Q602E7|MNMG_MYCH2 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|53987145|gb|AAV27346.1| glucose inhibited division protein A [Mycoplasma hyopneumoniae 232] Length = 619 Score = 462 bits (1190), Expect = e-128, Method: Compositional matrix adjust. Identities = 263/611 (43%), Positives = 361/611 (59%), Gaps = 15/611 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D IV+GGGHAG EA K LIT + SM CNPAIGG KG + REIDAL Sbjct: 12 FDAIVVGGGHAGIEAVYALLKKKLKVVLITLDKKKLASMPCNPAIGGPAKGIITREIDAL 71 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+ G+++D A IQ + LN KGPAV R Q D+E Y + +++ QENL +I+ V+ Sbjct: 72 GGVQGKLSDLAMIQIKYLNESKGPAVLAIRAQIDKEKYSKLILKDLKKQENLLIIEDLVS 131 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 EKN + + + TV++TTGT++ + G L IP+G G SN L N+ Sbjct: 132 ELLVEKNRVFGLKTAKKQVFFSKTVIITTGTYMDSKVLRGSLAIPSGPDGQQTSNLLSNN 191 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 F+ RLKTGTP R+ +I + K EK+ I FSF + +QI C +T T Sbjct: 192 LKTLGFELQRLKTGTPPRIFTSSIDFSKVEKEVLPVYNINFSFQSKHKLKKQISCYLTYT 251 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 +TH II +N+ S++YSG I GPRYCPSIEDKIVRF E+ HQIF EPE D++ Sbjct: 252 TAKTHDIINKNLGKSSMYSGLISGVGPRYCPSIEDKIVRFSEKPRHQIFFEPETKKQDIM 311 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG+ST++PE++Q + ++TIPGLE I + GYAIEYD +NP EL +LETK++ GLF+ Sbjct: 312 YINGLSTSMPEDVQLEMVKTIPGLENAKIAKFGYAIEYDALNPLELKKSLETKRVKGLFM 371 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGT+GYEEAAAQGLVAGIN+ + + R D YIGV+IDDL +KG EPYR Sbjct: 372 AGQINGTSGYEEAAAQGLVAGINAGQFVLGKKPVEILRNDGYIGVLIDDLVTKGTKEPYR 431 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF-AKYIQEYNFLRSLLKSLVLT 484 M TSRAEYR+ LR DNAD R+ +K G I ++ + AKY + + L K V Sbjct: 432 MLTSRAEYRLILRNDNADIRMAKYALKSGLISKKEYLKIKAKYAKIDRKILELSKEFVSP 491 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDAR-KFSSLVIERLQIESSYA 543 L+ K+ K + +S+P+ N I PD + V+ RL+ Sbjct: 492 KDELAKKYNLEKRISKLK----LISWPNV---NFKDILPDFEFGYELTVMARLK------ 538 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y +Q EA+++ EK LIP + +Y + LS+E +K ++P + +AS+I G+ P Sbjct: 539 GYIQKQNSEAQKMIRLEKLLIPGELNYEKVANLSSEALDKFQKVRPKTIGEASRISGVNP 598 Query: 604 AALNLLLIYIK 614 A + +LL +IK Sbjct: 599 ADIQMLLFHIK 609 >gi|53711391|ref|YP_097383.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides fragilis YCH46] gi|265764837|ref|ZP_06093112.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides sp. 2_1_16] gi|81170517|sp|Q650H5|MNMG_BACFR RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|52214256|dbj|BAD46849.1| glucose-inhibited division protein A [Bacteroides fragilis YCH46] gi|263254221|gb|EEZ25655.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides sp. 2_1_16] Length = 625 Score = 462 bits (1190), Expect = e-128, Method: Compositional matrix adjust. Identities = 273/628 (43%), Positives = 376/628 (59%), Gaps = 33/628 (5%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAGCEAAA AA LG+ T LIT + + MSCNPA+GG+ KG +VREIDAL Sbjct: 5 YDVIVIGAGHAGCEAAAAAANLGSKTCLITMDMNKVAQMSCNPAVGGIAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ-ENLDVIQGEV 124 G MG V D IQFR+LN KGPA+ PR Q DR + A REIL NL + Q V Sbjct: 65 GGYMGLVTDQTAIQFRILNRSKGPAMWSPRAQCDRNKFIWAW-REILENIPNLHIWQDTV 123 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + + +VLT GTFL G++H+GK ++P GRM + S L Sbjct: 124 KEIIVENGEVVGLKTFWDVTFHARCIVLTAGTFLNGLMHVGKTQLPGGRMAEPASYKLTE 183 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 S K + GR+KTGTP R+DG+++ ++ + Q + FSFM + + +Q++C Sbjct: 184 SIAKHGIEYGRMKTGTPVRIDGRSVHYELMDTQDGECDFHKFSFMNTSVRHLKQLQCWTC 243 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN E H ++ + S +++G I+S GPRYCPSIE KIV F ++ HQ+FLEPEG T Sbjct: 244 FTNEEAHNVLRNGLADSPLFNGQIQSIGPRYCPSIETKIVTFPDKEQHQLFLEPEGETTQ 303 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y NG S++LP EIQ + ++ IP + + I RPGYAIEYDY +P +L TLE+KKI L Sbjct: 304 ELYLNGFSSSLPMEIQIEALKKIPAFKDLVIYRPGYAIEYDYFDPTQLKHTLESKKIKNL 363 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ+NGTTGYEEA QG++AGIN+ + + +R ++YIGV+IDDL +KGV EP Sbjct: 364 FFAGQVNGTTGYEEAGGQGIIAGINAHINCHGGEPFTLARDEAYIGVLIDDLVTKGVDEP 423 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR-----QKRFA-----KYIQEYNF 473 YRMFTSRAEYRI LR D+AD RLT KLG + E R KR A + + Y+ Sbjct: 424 YRMFTSRAEYRILLRMDDADMRLTERAYKLGLVKEDRYALLKSKREAVENIVNFTRNYSI 483 Query: 474 LRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICP---------- 523 +L+ + +NL +T + +Q K + ++ P +I+N+ P Sbjct: 484 KAALINDAL---ENLGTTPL--RQGCKL---IDLINRPQITIENISEYVPAFKRELDKIT 535 Query: 524 DARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEK 583 D RK ++E +I Y Y GR+ I A ++ E I FDY SL +LS E ++K Sbjct: 536 DERK--EEILEAAEILIKYEGYIGRERIIADKLARLESIKIKGKFDYDSLQSLSTEARQK 593 Query: 584 LSILKPFNLLQASKIEGMTPAALNLLLI 611 L + P + QAS+I G++P+ +N+LL+ Sbjct: 594 LKKIDPETIAQASRIPGVSPSDINVLLV 621 >gi|41058550|gb|AAR99255.1| glucose-inhibited division protein A [Candidatus Blochmannia vafer] Length = 595 Score = 462 bits (1190), Expect = e-128, Method: Compositional matrix adjust. Identities = 254/586 (43%), Positives = 364/586 (62%), Gaps = 21/586 (3%) Query: 41 IGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADR 100 +G MSCNP+IGG+GKGHLV+EIDA+ G+M D +GIQFR+LN KG AV+ R QAD+ Sbjct: 1 LGQMSCNPSIGGIGKGHLVKEIDAMGGIMANAIDRSGIQFRILNSSKGAAVKSTRAQADK 60 Query: 101 ELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSM-IRCSTVVLTTGTFLR 159 LY+ +++ + Q L ++Q V N + +++ + M I +V+LTTGTFL Sbjct: 61 ILYKQIIRQSLEDQSYLYILQASVEDVIIRHNKVMGVIIPNIEMKIFARSVILTTGTFLN 120 Query: 160 GVIHIGKLKIPAGRMGDSPSNSLFNS-FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQF 218 G I+IG GR GD S+SL + + RLKTGT R+ K + ++ +Q Sbjct: 121 GKIYIGMNNFEGGRAGDLESSSLLSRRLQELSLKVNRLKTGTSPRIYAKGVNFECMVEQH 180 Query: 219 ADERLIPFSFM-TDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPS 277 +D + FSF+ + K +QI C IT TN +TH II N+ HS +Y+G I PRYCPS Sbjct: 181 SDCPIPVFSFIGSSKQHPKQIPCYITHTNSKTHDIIRSNLHHSPVYAGLINGIPPRYCPS 240 Query: 278 IEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRP 337 IEDK++RF +++ HQIFLEPEGL T +Y NG++T+LP +Q Q I++I GLE I+RP Sbjct: 241 IEDKVIRFPDKDTHQIFLEPEGLTTSEIYLNGVATSLPFNVQIQIIQSIKGLENARILRP 300 Query: 338 GYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLD 397 GYAIEYD+ NP +L TLE+K ISGLFL+GQINGTTGYEEAAAQGL++GIN+AR + Sbjct: 301 GYAIEYDFFNPIDLKLTLESKFISGLFLSGQINGTTGYEEAAAQGLLSGINAARYAQNKT 360 Query: 398 CICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIG 457 R SY+GV++DDL + G EPYRMFTSRAEYR+SLR DNAD RLT I +LG I Sbjct: 361 EWYPKRDQSYLGVLVDDLCTHGTTEPYRMFTSRAEYRLSLREDNADLRLTDIARQLGLIT 420 Query: 458 ERRQKRFAKYIQEYNFLRSLLK----------SLVLTSKNLSSTSISFKQDGKTRTAYEF 507 + R + F +++ N R + + ++ ++ + K +G+ Sbjct: 421 DNRWRIFC--VKQENIEREFQRFRNTYIFPNTTDIIKLNSILKVPLMNKVNGEDLLKRPE 478 Query: 508 LSYPDFSIQNLFS-ICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPK 566 ++Y S + F + D + V E+++I+ YA Y RQ E E L+P Sbjct: 479 INYATLSQLSTFKPVISDNQ-----VYEQIEIQIKYAGYLNRQKEEIDRNLRNEDTLLPF 533 Query: 567 DFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIY 612 D +Y+++ LS E+ EKL+ +P+++ QAS+I G+TP A+++LL++ Sbjct: 534 DINYNNIVGLSTEVVEKLNYCRPYSVGQASRISGITPVAISILLVW 579 >gi|160888678|ref|ZP_02069681.1| hypothetical protein BACUNI_01095 [Bacteroides uniformis ATCC 8492] gi|317478017|ref|ZP_07937199.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides sp. 4_1_36] gi|156861992|gb|EDO55423.1| hypothetical protein BACUNI_01095 [Bacteroides uniformis ATCC 8492] gi|316905806|gb|EFV27578.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides sp. 4_1_36] Length = 624 Score = 462 bits (1188), Expect = e-128, Method: Compositional matrix adjust. Identities = 274/625 (43%), Positives = 373/625 (59%), Gaps = 28/625 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAGCEAAA AA LG+ T LIT + IG MSCNPA+GG+ KG +VREIDAL Sbjct: 5 YDVIVIGAGHAGCEAAAAAANLGSKTCLITMDMNKIGQMSCNPAVGGIAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ-ENLDVIQGEV 124 G MG V D IQFR+LN KGPA+ PR Q DR + A REIL NL + Q V Sbjct: 65 GGYMGLVTDQTAIQFRILNRSKGPAMWSPRAQCDRNKFIWAW-REILENIPNLHIWQDTV 123 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E I+ +V VVLT GTFL G++H+G+ +P GRM + S L Sbjct: 124 QEILVENGEITGVVTLWGVTFHAKCVVLTAGTFLNGLMHVGRTMLPGGRMAEPASYQLTE 183 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 S K GR+KTGTP R+DG+++ ++ E Q + FSFM + + +Q+ C Sbjct: 184 SIAKHGITFGRMKTGTPVRIDGRSVHYEDMEIQDGECDFHKFSFMDTHVRHLKQLPCWTC 243 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN E HRI+ E + S +++G I+S GPRYCPSIE KIV F ++ HQ+FLEPEG T Sbjct: 244 FTNEEAHRILQEGLPDSPLFNGQIQSIGPRYCPSIETKIVTFPDKPQHQLFLEPEGETTQ 303 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y NG S++LP IQ ++ IP + I RPGYAIEYD+ +P +L TLETK I L Sbjct: 304 ELYLNGFSSSLPMNIQIAALKKIPAFRDLVIYRPGYAIEYDFFDPTQLKHTLETKNIKNL 363 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ+NGTTGYEEAA QG++AGIN+ + + +R ++YIGV+IDDL +KGV EP Sbjct: 364 FFAGQVNGTTGYEEAAGQGIMAGINAHINCHGGEPFTLARDEAYIGVLIDDLVTKGVDEP 423 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQK----------RFAKYIQEYNF 473 YRMFTSRAEYRI LR D+AD RLT KLG E R K R + + Y+ Sbjct: 424 YRMFTSRAEYRILLRMDDADMRLTEKAWKLGLAKEERYKLLTEKREAVNRIIDFARNYSM 483 Query: 474 LRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSL- 531 +L+ ++ + L +T + +Q K + ++ P +I+N+ + R+ + Sbjct: 484 KPALINPVL---EQLGTTPL--RQGCKL---IDLINRPQITIENIAEHVSAFKRELDKIS 535 Query: 532 -----VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSI 586 ++E +I Y Y GR+ I A ++ E I FDY+S+ +LS E ++KL Sbjct: 536 DRKEEIVEAAEILIKYEGYIGRERIIADKLARLESIKIKGKFDYNSIQSLSTEARQKLMK 595 Query: 587 LKPFNLLQASKIEGMTPAALNLLLI 611 + P + QAS+I G++P+ +N+LL+ Sbjct: 596 IDPETIAQASRIPGVSPSDINVLLV 620 >gi|237716852|ref|ZP_04547333.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides sp. D1] gi|262405623|ref|ZP_06082173.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides sp. 2_1_22] gi|294644432|ref|ZP_06722195.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides ovatus SD CC 2a] gi|294810426|ref|ZP_06769083.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides xylanisolvens SD CC 1b] gi|229442835|gb|EEO48626.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides sp. D1] gi|262356498|gb|EEZ05588.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides sp. 2_1_22] gi|292640267|gb|EFF58522.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides ovatus SD CC 2a] gi|294442391|gb|EFG11201.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides xylanisolvens SD CC 1b] gi|295085942|emb|CBK67465.1| glucose-inhibited division protein A [Bacteroides xylanisolvens XB1A] Length = 628 Score = 462 bits (1188), Expect = e-128, Method: Compositional matrix adjust. Identities = 267/623 (42%), Positives = 372/623 (59%), Gaps = 20/623 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAGCEAAA AA LG+ T LIT + IG MSCNPA+GG+ KG +VREIDAL Sbjct: 5 YDVIVIGAGHAGCEAAAAAANLGSKTCLITMDMNKIGQMSCNPAVGGIAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG V D IQFR+LN KGPA+ PR Q DR + + + ++ + NL + Q V Sbjct: 65 GGQMGLVTDETAIQFRILNRSKGPAMWSPRAQCDRAKFIWSWREKLENTPNLHIWQDTVC 124 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + +V + +VLT GTFL G++H+G+ ++P GRM + S L S Sbjct: 125 ELLVENGEATGLVTAWGVTFKAKCIVLTAGTFLNGLMHVGRHQLPGGRMAEPASYQLTES 184 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GR+KTGTP R+D +++ +D+ + Q + FSFM + +Q++C Sbjct: 185 IARHGITYGRMKTGTPVRIDARSVHFDQMDTQAGECDFHKFSFMNTSTHHLKQLQCWTCY 244 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN E HRI+ E + S +++G I+S GPRYCPSIE KIV F +++ HQ+FLEPEG T Sbjct: 245 TNEEVHRILREGLPDSPLFNGQIQSIGPRYCPSIETKIVTFPDKDQHQLFLEPEGETTQE 304 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y NG S++LP EIQ ++ IP + + I RPGYAIEYDY +P +L TLE+K I LF Sbjct: 305 LYLNGFSSSLPMEIQIAALKQIPAFKDLVIYRPGYAIEYDYFDPTQLKHTLESKIIKNLF 364 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ+NGTTGYEEA QGL+AGIN+ + + +R ++YIGV+IDDL +KGV EPY Sbjct: 365 FAGQVNGTTGYEEAGGQGLIAGINAHINCHGGEAFTLARDEAYIGVLIDDLVTKGVDEPY 424 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR----QKRFAKYIQEYNFLRSLLKS 480 RMFTSRAEYRI LR D+AD RLT KLG E R + + Q +F R+ Sbjct: 425 RMFTSRAEYRILLRMDDADMRLTEKAFKLGLAKEDRYQLVKSKKEAVEQIVSFARNYSMK 484 Query: 481 LVLTSKNLSSTSIS-FKQDGKTRTAYEFLSYPDFSIQNLFSICP----DARKFSSL---- 531 L + L + +Q K E L+ P +I+N+ P + K +S Sbjct: 485 PALINDALEKIGTTPLRQGCKL---IEILNRPQVTIENITEYVPAFQRELEKATSSDQDR 541 Query: 532 ---VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 ++E +I Y Y R+ + A+++ E I FDYS++ +LS E ++KL + Sbjct: 542 KEEILEAAEILIKYQGYIDRERMIAEKLARLESIKIKGKFDYSTIQSLSTEARQKLVKID 601 Query: 589 PFNLLQASKIEGMTPAALNLLLI 611 P + QAS+I G++P+ +N+LL+ Sbjct: 602 PETIAQASRIPGVSPSDINVLLV 624 >gi|313885557|ref|ZP_07819307.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Eremococcus coleocola ACS-139-V-Col8] gi|312619287|gb|EFR30726.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Eremococcus coleocola ACS-139-V-Col8] Length = 638 Score = 462 bits (1188), Expect = e-128, Method: Compositional matrix adjust. Identities = 255/621 (41%), Positives = 373/621 (60%), Gaps = 13/621 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAG EAA AA++ T L+T + M CNP++GG KG +VREIDA Sbjct: 8 NYDVIVVGAGHAGSEAALAAARMDCKTLLLTISLEMVAFMPCNPSVGGPAKGVVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAV+ R QAD+ Y +M+ I + L++ QG V Sbjct: 68 LGGEMGRNIDRTSIQTRMLNTSKGPAVQALRAQADKAAYARSMKAVIEDTDGLELHQGLV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + ++ VVLT GT RG I IG+LK +G PS L Sbjct: 128 EELIVEDGQVKGVRTNTGAIYHSQAVVLTAGTSSRGKIIIGELKYSSGPNNTLPSIKLSE 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNRQ-IECGI 242 + ++ + R KTGTP R+ +I +D+TE Q D FS+ T D+ N + C + Sbjct: 188 NLLELGIELARFKTGTPPRIHYDSIDFDQTEIQPGDIEPNHFSYETPDEAFNPESTPCWL 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II +N+ + ++SG ++ G RYCPSIEDKIVRF ++ HQIF+EPEGL T Sbjct: 248 THTNEKTHEIIRKNLHRAPMFSGMVEGVGARYCPSIEDKIVRFSDKPRHQIFIEPEGLET 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +Y G+ST++PEEIQ + ++ G+E+ ++RPGYAIEYD + P +L LE KK+ G Sbjct: 308 KEMYVQGLSTSMPEEIQLDMLHSVKGMERARLMRPGYAIEYDVVIPHQLNLNLEVKKLPG 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQ+NGT+GYEEAA QG++AGIN+A K D R ++YIGVMIDDL +KG E Sbjct: 368 LFTAGQMNGTSGYEEAAGQGIMAGINAALKVQGKDPFILRRDEAYIGVMIDDLVTKGTTE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL- 481 PYR+ TSRAE+R+ LR DNAD RLT G ++G IG+ +R+A Y ++N ++ +K L Sbjct: 428 PYRLLTSRAEFRLLLRHDNADLRLTERGRQIGLIGD---ERYAAYQAKFNLVQDEIKRLE 484 Query: 482 -VLTSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARK-FSSLVIE 534 + + N S F + G A E L P+ ++L ++ PD + + Sbjct: 485 GLRLTPNTPGLSEYFDRVGSAPLKDGILASELLKRPEIKYRDLVALLPDRDQVLDRQEGQ 544 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ YA Y + + + + E + IP D D+ ++ L+NE +++L ++ P L Q Sbjct: 545 QVEIQIKYAGYIKKALRKVDRMAGMESKHIPHDIDWDAIGNLANEARDRLKLINPSTLGQ 604 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS++ G+ PA + +L +Y+++ Sbjct: 605 ASRVSGVNPADIAILSVYLQQ 625 >gi|222099397|ref|YP_002533965.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Thermotoga neapolitana DSM 4359] gi|221571787|gb|ACM22599.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Thermotoga neapolitana DSM 4359] Length = 626 Score = 462 bits (1188), Expect = e-128, Method: Compositional matrix adjust. Identities = 257/622 (41%), Positives = 373/622 (59%), Gaps = 17/622 (2%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 +R YD+IV+G GHAG EAA +A++G ++T T+G CNPAIGG KG +VREI Sbjct: 6 DRVYDIIVVGAGHAGIEAALASARMGFRVLVLTVNPDTVGWAPCNPAIGGPAKGVVVREI 65 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G M + D I R+LNV KGPAVR R Q D+ Y M+R++ + N+ + G Sbjct: 66 DALGGEMAKTTDETMINVRMLNVSKGPAVRALRAQIDKISYSRTMKRKLETNPNIVLRHG 125 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRC--STVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 V EK + + DN I V++TTGTFLRG I IG+ PAGRMG+ P+ Sbjct: 126 IVERLLVEKG--KVVGVVDNYGIDYLGKAVIITTGTFLRGKIFIGRSVFPAGRMGEFPAA 183 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIE 239 L S ++ F+ GR KTGTPAR+ ++I + E+Q + + FSF ++ K+ + Sbjct: 184 KLTQSLIELGFEVGRFKTGTPARVLKRSINFSVMERQDTSDEPLAFSFFSEPKVLPKDYP 243 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGD--IKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 C +TRTN ETH II + ++ S +Y I+ GPRYCPSIEDK+++F ++ HQ+F+EP Sbjct: 244 CWLTRTNPETHNIIRQYLEFSPLYGTVKLIEGVGPRYCPSIEDKVIKFRDKESHQVFVEP 303 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EG +T+ Y NG+ST+LP E Q + IR++ GLE I RP YAIEYDYI+P++L+PTLE+ Sbjct: 304 EGRDTEEYYLNGLSTSLPYEAQIKMIRSVKGLENAIITRPAYAIEYDYIDPRQLYPTLES 363 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 K + LF AGQ+NGT+GYEEAA QGL+AGIN+A K + R+++YIGV+IDDL + Sbjct: 364 KIVENLFFAGQVNGTSGYEEAAGQGLIAGINAALKLRGEPPLILKRSEAYIGVLIDDLVT 423 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL 477 +GV EPYR+ TSRAEYR+ LR DNA RL G ++G I + ++ + Sbjct: 424 RGVDEPYRLLTSRAEYRLLLRHDNAHLRLAKHGYRVGLIPKWFYEKVLSLERRVKEEIER 483 Query: 478 LKSLVLTSKN------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL 531 LK +V+ + ++ + K+ + Y+ L P+ S + L P+ Sbjct: 484 LKKVVIKPSDRINDILMAEGTTPLKE---ATSLYQLLKRPELSYEVLKRFDPNPID-DPE 539 Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 V E+++I Y Y + E + E IP D DY +P LS E ++KL ++P + Sbjct: 540 VAEQVEINVKYEGYIQKMFEEVAIFEKYESYEIPADIDYDVVPNLSTEARDKLKRIRPRS 599 Query: 592 LLQASKIEGMTPAALNLLLIYI 613 + QA +I G+ P+ ++ L+IY+ Sbjct: 600 IGQAMRIPGINPSDISNLIIYL 621 >gi|253564501|ref|ZP_04841958.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacteroides sp. 3_2_5] gi|251948277|gb|EES88559.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacteroides sp. 3_2_5] gi|301161173|emb|CBW20711.1| putative glucose inhibited division protein A [Bacteroides fragilis 638R] Length = 625 Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust. Identities = 273/628 (43%), Positives = 376/628 (59%), Gaps = 33/628 (5%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAGCEAAA AA LG+ T LIT + + MSCNPA+GG+ KG +VREIDAL Sbjct: 5 YDVIVIGAGHAGCEAAAAAANLGSKTCLITMDMNKVAQMSCNPAVGGIAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ-ENLDVIQGEV 124 G MG V D IQFR+LN KGPA+ PR Q DR + A REIL NL + Q V Sbjct: 65 GGYMGLVTDQTAIQFRILNRSKGPAMWSPRAQCDRNKFIWAW-REILENIPNLHIWQDTV 123 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + + +VLT GTFL G++H+GK ++P GRM + S L Sbjct: 124 KEIIVENGEVVGLKTFWDVTFHARCIVLTAGTFLNGLMHVGKNQLPGGRMAEPASYKLTE 183 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 S K + GR+KTGTP R+DG+++ ++ + Q + FSFM + + +Q++C Sbjct: 184 SIAKHGIEYGRMKTGTPVRIDGRSVHYELMDTQDGECDFHKFSFMNTSVRHLKQLQCWTC 243 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN E H ++ + S +++G I+S GPRYCPSIE KIV F ++ HQ+FLEPEG T Sbjct: 244 FTNEEAHNVLRNGLADSPLFNGQIQSIGPRYCPSIETKIVTFPDKEQHQLFLEPEGETTQ 303 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y NG S++LP EIQ + ++ IP + + I RPGYAIEYDY +P +L TLE+KKI L Sbjct: 304 ELYLNGFSSSLPMEIQIEALKKIPAFKDLVIYRPGYAIEYDYFDPTQLKHTLESKKIKNL 363 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ+NGTTGYEEA QG++AGIN+ + + +R ++YIGV+IDDL +KGV EP Sbjct: 364 FFAGQVNGTTGYEEAGGQGIIAGINAHINCHGGEPFTLARDEAYIGVLIDDLVTKGVDEP 423 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR-----QKRFA-----KYIQEYNF 473 YRMFTSRAEYRI LR D+AD RLT KLG + E R KR A + + Y+ Sbjct: 424 YRMFTSRAEYRILLRMDDADMRLTERAYKLGLVKEDRYALLKSKREAVENIVNFTRNYSI 483 Query: 474 LRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICP---------- 523 +L+ + +NL +T + +Q K + ++ P +I+N+ P Sbjct: 484 KAALINDAL---ENLGTTPL--RQGCKL---IDLINRPQITIENISEYVPAFKRELDKIT 535 Query: 524 DARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEK 583 D RK ++E +I Y Y GR+ I A ++ E I FDY SL +LS E ++K Sbjct: 536 DERK--EEILEAAEILIKYEGYIGRERIIADKLARLESIKIKGKFDYDSLQSLSTEARQK 593 Query: 584 LSILKPFNLLQASKIEGMTPAALNLLLI 611 L + P + QAS+I G++P+ +N+LL+ Sbjct: 594 LKKIDPETIAQASRIPGVSPSDINVLLV 621 >gi|270295024|ref|ZP_06201225.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides sp. D20] gi|270274271|gb|EFA20132.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides sp. D20] Length = 624 Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust. Identities = 274/625 (43%), Positives = 373/625 (59%), Gaps = 28/625 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAGCEAAA AA LG+ T LIT + IG MSCNPA+GG+ KG +VREIDAL Sbjct: 5 YDVIVIGAGHAGCEAAAAAANLGSKTCLITMDMNKIGQMSCNPAVGGIAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ-ENLDVIQGEV 124 G MG V D IQFR+LN KGPA+ PR Q DR + A REIL NL + Q V Sbjct: 65 GGYMGLVTDQTAIQFRILNRSKGPAMWSPRAQCDRNKFIWAW-REILENIPNLHIWQDTV 123 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E I+ +V VVLT GTFL G++H+G+ +P GRM + S L Sbjct: 124 QEILVENGEITGVVTLWGVTFHAKCVVLTAGTFLNGLMHVGRTMLPGGRMAEPASYQLTE 183 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 S K GR+KTGTP R+DG+++ ++ E Q + FSFM + + +Q+ C Sbjct: 184 SIAKHGITFGRMKTGTPVRIDGRSVHYEDMEIQDGECDFHKFSFMDIHVRHLKQLPCWTC 243 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN E HRI+ E + S +++G I+S GPRYCPSIE KIV F ++ HQ+FLEPEG T Sbjct: 244 FTNEEAHRILQEGLPDSPLFNGQIQSIGPRYCPSIETKIVTFPDKPQHQLFLEPEGETTQ 303 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y NG S++LP IQ ++ IP + I RPGYAIEYD+ +P +L TLETK I L Sbjct: 304 ELYLNGFSSSLPMNIQIAALKKIPAFRDLVIYRPGYAIEYDFFDPTQLKHTLETKNIKNL 363 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ+NGTTGYEEAA QG++AGIN+ + + +R ++YIGV+IDDL +KGV EP Sbjct: 364 FFAGQVNGTTGYEEAAGQGIMAGINAHINCHGGEPFTLARDEAYIGVLIDDLVTKGVDEP 423 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQK----------RFAKYIQEYNF 473 YRMFTSRAEYRI LR D+AD RLT KLG E R K R + + Y+ Sbjct: 424 YRMFTSRAEYRILLRMDDADMRLTEKAWKLGLAKEERYKLLTEKREAVNRIIDFARNYSM 483 Query: 474 LRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSL- 531 +L+ ++ + L +T + +Q K + ++ P +I+N+ + R+ + Sbjct: 484 KPALINPVL---EQLGTTPL--RQGCKL---IDLINRPQITIENIAEHVSAFKRELDKIS 535 Query: 532 -----VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSI 586 ++E +I Y Y GR+ I A ++ E I FDY+S+ +LS E ++KL Sbjct: 536 DRKEEIVEAAEILIKYEGYIGRERIIADKLARLESIKIKGKFDYNSIQSLSTEARQKLMK 595 Query: 587 LKPFNLLQASKIEGMTPAALNLLLI 611 + P + QAS+I G++P+ +N+LL+ Sbjct: 596 IDPETIAQASRIPGVSPSDINVLLV 620 >gi|240047139|ref|YP_002960527.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Mycoplasma conjunctivae HRC/581] gi|239984711|emb|CAT04683.1| tRNA uridine 5-carboxymethylaminomethyl modifi [Mycoplasma conjunctivae] Length = 613 Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust. Identities = 266/618 (43%), Positives = 361/618 (58%), Gaps = 23/618 (3%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 N+ +D IV+GGGHAG EA AK G ALIT + + SM CNP+IGG KG + REI Sbjct: 4 NKKFDAIVVGGGHAGVEAVFALAKKGLKVALITLSKNKLASMPCNPSIGGSAKGIITREI 63 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G+ + AD A IQ ++LN KGPAVR RTQ D+E Y A+ + N+ + + Sbjct: 64 DALGGVQAKFADQAMIQIKILNESKGPAVRAIRTQIDKEKYSKAVLSSMKKLNNVFIFED 123 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 V + + + Q N V++TTGT+L + G + +G G S+ L Sbjct: 124 IVLELLVKNKKVYGVRSQKNGDFFAKAVIITTGTYLDSKVLRGSSSVSSGPDGQITSDQL 183 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGI 242 + +K FD RLKTGTP R+ +I + + EK+ I FSF + K +QI C + Sbjct: 184 SKNLIKLGFDLQRLKTGTPPRIYTDSIDFSEVEKEDVPLLNINFSFSSKKRIKKQISCYL 243 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T T+ +TH IIM+N+ S++YSG IK GPRYCPS+EDKIVRF + HQIF EPE Sbjct: 244 TYTSPKTHEIIMQNLDKSSMYSGLIKGIGPRYCPSVEDKIVRFSTKERHQIFFEPETKKQ 303 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 D++Y NG+ST++PE++Q Q +++IPGL+ I + GYAIEYD INP EL P+LETKKI Sbjct: 304 DIMYINGLSTSMPEDVQIQMVKSIPGLKNARIAKFGYAIEYDAINPLELKPSLETKKIKS 363 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF+AGQINGT+GYEEAAAQGL+AGIN+ +K I R D YIGV+IDDL +KG E Sbjct: 364 LFMAGQINGTSGYEEAAAQGLIAGINAGQKIEGKRAIKILRNDGYIGVLIDDLVTKGTKE 423 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNF----LRSLL 478 PYRM TSRAEYR+ LR DNAD R+ K G I ++ + K IQ+Y + L Sbjct: 424 PYRMLTSRAEYRLILRNDNADIRMAKYAYKSGTI---TKEEYLKVIQKYRLIDKKISQLD 480 Query: 479 KSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDAR-KFSSLVIERLQ 537 K V L K + +S PD ++ I D + +V+ RL+ Sbjct: 481 KEFVSPKDELGKKYNVLNGISKLK----LISRPDTDYKD---IVKDFEFGYELMVLCRLK 533 Query: 538 IESSYAAYTGRQMIEA-KEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 Y +Q A K I+ E R IP+ +YS + LS+E +KL +KP + QAS Sbjct: 534 ------GYIQKQNNAAQKMIRLEHLR-IPESLNYSEVANLSSEALDKLKKVKPKTIGQAS 586 Query: 597 KIEGMTPAALNLLLIYIK 614 +I G+ PA + +LL ++K Sbjct: 587 RISGINPADIQMLLFHLK 604 >gi|60679709|ref|YP_209853.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides fragilis NCTC 9343] gi|81170516|sp|Q5LIY5|MNMG_BACFN RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|60491143|emb|CAH05891.1| putative glucose inhibited division protein A [Bacteroides fragilis NCTC 9343] Length = 625 Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust. Identities = 272/628 (43%), Positives = 376/628 (59%), Gaps = 33/628 (5%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAGCEAAA AA LG+ T LIT + + MSCNPA+GG+ KG +VREIDAL Sbjct: 5 YDVIVIGAGHAGCEAAAAAANLGSKTCLITMDMNKVAQMSCNPAVGGIAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ-ENLDVIQGEV 124 G MG V D IQFR+LN KGPA+ PR Q DR + A REIL NL + Q V Sbjct: 65 GGYMGLVTDQTAIQFRILNRSKGPAMWSPRAQCDRNKFIWAW-REILENIPNLHIWQDTV 123 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + + +VLT GTFL G++H+GK ++P GRM + S L Sbjct: 124 KEIIVENGEVVGLKTFWDVTFHARCIVLTAGTFLNGLMHVGKTQLPGGRMAEPASYKLTE 183 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 S + + GR+KTGTP R+DG+++ ++ + Q + FSFM + + +Q++C Sbjct: 184 SIAEHGIEYGRMKTGTPVRIDGRSVHYELMDTQDGECDFHKFSFMNTSVRHLKQLQCWTC 243 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN E H ++ + S +++G I+S GPRYCPSIE KIV F ++ HQ+FLEPEG T Sbjct: 244 FTNEEAHNVLRNGLADSPLFNGQIQSIGPRYCPSIETKIVTFPDKEQHQLFLEPEGETTQ 303 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y NG S++LP EIQ + ++ IP + + I RPGYAIEYDY +P +L TLE+KKI L Sbjct: 304 ELYLNGFSSSLPMEIQIEALKKIPAFKDLVIYRPGYAIEYDYFDPTQLKHTLESKKIKNL 363 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ+NGTTGYEEA QG++AGIN+ + + +R ++YIGV+IDDL +KGV EP Sbjct: 364 FFAGQVNGTTGYEEAGGQGIIAGINAHINCHGGEPFTLARDEAYIGVLIDDLVTKGVDEP 423 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR-----QKRFA-----KYIQEYNF 473 YRMFTSRAEYRI LR D+AD RLT KLG + E R KR A + + Y+ Sbjct: 424 YRMFTSRAEYRILLRMDDADMRLTERAYKLGLVKEDRYALLKSKREAVENIVNFTRNYSI 483 Query: 474 LRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICP---------- 523 +L+ + +NL +T + +Q K + ++ P +I+N+ P Sbjct: 484 KAALINDAL---ENLGTTPL--RQGCKL---IDLINRPQITIENISEYVPAFKRELDKIT 535 Query: 524 DARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEK 583 D RK ++E +I Y Y GR+ I A ++ E I FDY SL +LS E ++K Sbjct: 536 DERK--EEILEAAEILIKYEGYIGRERIIADKLARLESIKIKGKFDYDSLQSLSTEARQK 593 Query: 584 LSILKPFNLLQASKIEGMTPAALNLLLI 611 L + P + QAS+I G++P+ +N+LL+ Sbjct: 594 LKKIDPETIAQASRIPGVSPSDINVLLV 621 >gi|303238024|ref|ZP_07324567.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prevotella disiens FB035-09AN] gi|302481814|gb|EFL44866.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prevotella disiens FB035-09AN] Length = 625 Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust. Identities = 257/626 (41%), Positives = 366/626 (58%), Gaps = 15/626 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 I YDV+VIGGGHAGCEAA AA +GA L+T + I MSCNPA+GG+ KG +VRE Sbjct: 3 ITFKYDVLVIGGGHAGCEAATAAANIGAKVCLVTMDMNKIAQMSCNPAVGGIAKGQIVRE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G MG V DA IQFR+LN KGPAV PR Q DRE + +R + +NLD+ Q Sbjct: 63 IDALGGQMGIVTDATAIQFRMLNRSKGPAVWSPRAQCDREKFISEWKRTLDHTDNLDIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 + + + + +V+T GTFL G++HIG+ ++ GR + ++ Sbjct: 123 DQADELIVKNGKAIGVKTIWGIDLYAQAIVVTAGTFLNGLMHIGRKQVEGGRCAEPAVHN 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 S ++ R+KTGTP R+D +++ ++ E Q + FSF+ + Q+ C Sbjct: 183 FAESIARWGIRKERMKTGTPVRIDKRSVHFEDMEAQPGESDYHQFSFIGNYRKLPQLPCW 242 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 TN E H I+ + S +++G I+S GPRYCPSIE K+V F ++N H +FLEPEG++ Sbjct: 243 TCNTNEEAHEILRRGVADSPLFNGQIQSTGPRYCPSIETKLVTFPDKNTHPLFLEPEGVD 302 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ +Y NG S+++P EIQ +R IP L + RPGYAIEYDY +P +L P+LE+K I+ Sbjct: 303 TNEMYLNGFSSSMPWEIQLAALRKIPALRDAKMYRPGYAIEYDYFDPTQLKPSLESKIIA 362 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 LFLAGQ+NGTTGYEEA QG+VAGIN+A + R +SYIGV+IDDLT+KGV Sbjct: 363 HLFLAGQVNGTTGYEEAGGQGMVAGINAAMLCSGNQPFIMKRDESYIGVLIDDLTTKGVD 422 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL--- 478 EPYRMFTSRAEYRI LR D+AD RLT ++G ++R+ +I + N + + Sbjct: 423 EPYRMFTSRAEYRILLRQDDADARLTERAYEIGIA---TKERYDWWIIKKNHIERTIDYC 479 Query: 479 -KSLVLTSK-NLSSTSISFKQDGKTRTAYEFLSYPDFSIQ-------NLFSICPDARKFS 529 K+ V + N SI + + ++ P +I L I A Sbjct: 480 NKNAVKPHEINGYLESIGSSPIRGSVKISDLIARPGVNIHALSEHISELKEIINAAPNRK 539 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 + E +I+ Y Y R+ I A ++ E I FDYS++ LS E ++KL ++P Sbjct: 540 EEITEAAEIKIKYKGYIERERIFADKMHRLEDIKIKGHFDYSTIHDLSTECRQKLERIQP 599 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKK 615 L QAS+I G++P+ +N+LL+ + + Sbjct: 600 ETLAQASRIPGVSPSDINVLLVLMGR 625 >gi|226225436|ref|YP_002759542.1| glucose inhibited division protein A [Gemmatimonas aurantiaca T-27] gi|226088627|dbj|BAH37072.1| glucose inhibited division protein A [Gemmatimonas aurantiaca T-27] Length = 635 Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust. Identities = 258/640 (40%), Positives = 378/640 (59%), Gaps = 35/640 (5%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA+ GA ALIT +G +SCNPAIGG+ KG +VRE+DAL Sbjct: 2 FDVIVIGGGHAGTEAAVAAARSGARVALITGALEQLGQLSCNPAIGGIAKGTVVREVDAL 61 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+M R D A +QFR+LN KGPAV PR Q DR LYR A+++ + +Q NL +QG VA Sbjct: 62 GGIMARATDMATVQFRMLNRGKGPAVWAPRAQCDRGLYRRAVRQLLEAQPNLVTMQGMVA 121 Query: 126 G--FNTEKNI-------ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIG-KLKIPAGRMG 175 F+ ++ ++ + + VVLTTGTF RG +HIG +I GR G Sbjct: 122 RLLFDDAGSLASGATRRVAGVETMEGRRFGARAVVLTTGTFGRGTMHIGTDTRISGGRAG 181 Query: 176 DSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN 235 ++PS L T R KTGTP R+DG+++ + + ++Q ++ L +S+ T Sbjct: 182 EAPSVHLGQQLDAEGLTTERFKTGTPPRIDGRSVDYTRFDRQESEIDLFDYSWSHFWTTP 241 Query: 236 R-----------QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVR 284 R Q+ C + +I ++I SA+Y G I S GPRYCPS+EDK+V+ Sbjct: 242 RRTADGAMRSPEQMPCWVGWLEEAGTELIAKHINESAMYGGAIASRGPRYCPSVEDKVVK 301 Query: 285 FGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYD 344 F ++ HQ+FLEPEG +T +Y NG+ST+LP +Q +R++ GLE V + R GYAIEYD Sbjct: 302 FPDKVRHQLFLEPEGHDTSELYVNGLSTSLPAPVQLAVLRSVHGLEDVRMTRAGYAIEYD 361 Query: 345 YINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 Y P +L+P+L ++ I GLF AGQ+NGTTGYEEA QG++AG+N+AR + + + I R Sbjct: 362 YYPPTQLWPSLGSRAIDGLFFAGQVNGTTGYEEAGGQGVMAGLNAARFTQEREPIVLGRE 421 Query: 405 DSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF 464 SYIGV+I+DLT++GV EPYR+FTSR+E+R+++R DNA +RL P+ G + Sbjct: 422 SSYIGVLINDLTTRGVDEPYRLFTSRSEFRLTVRQDNALSRLAPVSEAAGLWQD------ 475 Query: 465 AKYIQEYNFLRSLLKSLVLTSKNLSSTSIS--FKQDGKTRT------AYEFLSYPDFSIQ 516 A+ + L ++ ++L L S +I+ + TR A E + ++Q Sbjct: 476 AELEVLHARLGAVREALRLAEATSMSPAIADPILEAAGTRPLAHAVRAVELARRSEITLQ 535 Query: 517 NLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPAL 576 LF + I ++E YA Y R+ ++A + + ++P DY+++ L Sbjct: 536 VLFDAAGVGAELPRDAIVGAELEIKYAGYFERERLQANRLVAQGAVVLPPTLDYAAMRTL 595 Query: 577 SNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKN 616 S E ++K LKP L QAS I G++PA L L++ ++K+ Sbjct: 596 SIEARQKFERLKPGTLAQASAIPGISPADLQNLMLELRKH 635 >gi|153807190|ref|ZP_01959858.1| hypothetical protein BACCAC_01468 [Bacteroides caccae ATCC 43185] gi|149130310|gb|EDM21520.1| hypothetical protein BACCAC_01468 [Bacteroides caccae ATCC 43185] Length = 628 Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust. Identities = 268/624 (42%), Positives = 373/624 (59%), Gaps = 22/624 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAGCEAAA AA LG+ T LIT + IG MSCNPA+GG+ KG +VREIDAL Sbjct: 5 YDVIVIGAGHAGCEAAAAAANLGSKTCLITMDMNKIGQMSCNPAVGGIAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG V D IQFR+LN KGPA+ PR Q DR + + + + + NL + Q V Sbjct: 65 GGQMGLVTDETAIQFRILNRSKGPAMWSPRAQCDRAKFIWSWRERLENTPNLHIWQDTVC 124 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E ++ +V + +VLT GTFL G++H+G+ ++P GRM + S L S Sbjct: 125 ELLVENGEVTGLVTVWGVTFKAKCIVLTAGTFLNGLMHVGRHQLPGGRMAEPASYQLTES 184 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GR+KTGTP R+D +++ +D+ E Q + FSFM + +Q++C Sbjct: 185 IARHGITYGRMKTGTPVRIDARSVHFDQMETQDGECDFHKFSFMNTSTRHLKQLQCWTCY 244 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN E HRI+ + + S +++G I+S GPRYCPSIE KIV F +++ HQ+FLEPEG T Sbjct: 245 TNEEVHRILRDGLPDSPLFNGQIQSIGPRYCPSIETKIVTFPDKDQHQLFLEPEGETTQE 304 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y NG S++LP +IQ ++ IP + + I RPGYAIEYDY +P +L TLE+K I LF Sbjct: 305 LYLNGFSSSLPMDIQIAALKKIPAFKDLVIYRPGYAIEYDYFDPTQLKHTLESKVIKNLF 364 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ+NGTTGYEEA QG +AGIN+ + + +R ++YIGV+IDDL +KGV EPY Sbjct: 365 FAGQVNGTTGYEEAGGQGAIAGINAHINCHGGEEFTLARDEAYIGVLIDDLVTKGVDEPY 424 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQE-----YNFLRSLLK 479 RMFTSRAEYRI LR D+AD RLT KLG E R R K +E +F R+ Sbjct: 425 RMFTSRAEYRILLRMDDADMRLTERAYKLGLAKEDRY-RLMKSKKEAVEQIISFARNYSM 483 Query: 480 SLVLTSKNLSSTSIS-FKQDGKTRTAYEFLSYPDFSIQNLFSICP----DARKFSSL--- 531 L + L + +Q K E L+ P +I+N+ P + K +S Sbjct: 484 KPALINDALEKIGTTPLRQGCKL---IEILNRPQVTIENIAEHIPAFQRELEKVTSANQD 540 Query: 532 ----VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSIL 587 ++E +I Y Y R+ + A+++ E I FDYSS+ +LS E ++KL+ + Sbjct: 541 RKEEILEAAEILIKYQGYIDRERMIAEKLARLESIKIKGKFDYSSIQSLSTEARQKLTKI 600 Query: 588 KPFNLLQASKIEGMTPAALNLLLI 611 P + QAS+I G++P+ +N+LL+ Sbjct: 601 DPETIAQASRIPGVSPSDINVLLV 624 >gi|297567556|ref|YP_003686528.1| glucose inhibited division protein A [Meiothermus silvanus DSM 9946] gi|296852005|gb|ADH65020.1| glucose inhibited division protein A [Meiothermus silvanus DSM 9946] Length = 600 Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust. Identities = 257/621 (41%), Positives = 365/621 (58%), Gaps = 34/621 (5%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAG EAA AA++GA L+T IG M CNPA+GG GK LV E+ A+ Sbjct: 4 YDVIVVGGGHAGIEAAWAAAQVGARVGLVTSNPERIGLMPCNPAVGGPGKSQLVAEVVAM 63 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLMG++ADA I RVLN KGPAV+ R Q DR+ Y L QR +L+ ++ I+ EVA Sbjct: 64 GGLMGQLADATAIHTRVLNQSKGPAVQSLRVQVDRDAYALEAQRVLLAHPRIESIRAEVA 123 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + ++ D IR S+VV+ +GTFL GV+ G+ PAGR G+ P+ L S Sbjct: 124 ALWVEGGELFGVLTVDGRQIRSSSVVIASGTFLSGVVWYGRQSRPAGRQGEPPARFLSES 183 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIW--------DKTEKQFADERLIPFSFMTDKITNRQ 237 R KTGTP R+ ++ + D + FA IP T + T + Sbjct: 184 IRAIGHRMLRFKTGTPPRIRADSVDYGVLEVVPPDVPPQTFAG---IPGPHATARPTWQ- 239 Query: 238 IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 TRT THR+I EN+ S +Y GDI+ GPRYCPSIEDK++RF ++ H +F+EP Sbjct: 240 -----TRTTEATHRLIQENLHLSPLYGGDIEGIGPRYCPSIEDKVIRFADKETHLLFVEP 294 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 +GL T +Y G S++LP ++Q + +RT+PG EK I R YA+EYD ++ EL L++ Sbjct: 295 DGLETSELYLQGFSSSLPPQLQERMVRTLPGFEKAIIQRYAYAVEYDAVDATELTAGLQS 354 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 K++ GLF AGQINGT+GYEEAAAQGLVAG+N+AR + + I SR YIGV+I+DL Sbjct: 355 KRLPGLFTAGQINGTSGYEEAAAQGLVAGLNAARFARGQEEIRLSRESGYIGVLINDLVH 414 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL 477 +G EPYRM TSR E R+ R DNAD RL P+ ++ G R + K ++Y +++ Sbjct: 415 RGTDEPYRMMTSRVELRLLCRADNADERLVPLAVEAGL---RTRSDLEKIQRKYQRIQAE 471 Query: 478 LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERL 536 L+ L + +TS A +L P+ + +L + + P + S+ I ++ Sbjct: 472 LER--LERLRIENTS-----------ALLWLRRPEATYSDLIARLGPSPFELSADEIIQV 518 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I + YA Y RQ ++ +K E IP DY +P+LS E +EKLS +P + +AS Sbjct: 519 EIRAKYAGYIQRQQKLSERLKELESYHIPMALDYDRIPSLSREAREKLSKTRPATVAEAS 578 Query: 597 KIEGMTPAALNLLLIYIKKNT 617 ++ G+ + L LL+Y+ K + Sbjct: 579 RVPGVRDSDLTALLVYLTKAS 599 >gi|189464898|ref|ZP_03013683.1| hypothetical protein BACINT_01242 [Bacteroides intestinalis DSM 17393] gi|189437172|gb|EDV06157.1| hypothetical protein BACINT_01242 [Bacteroides intestinalis DSM 17393] Length = 624 Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust. Identities = 271/625 (43%), Positives = 384/625 (61%), Gaps = 28/625 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAGCEAAA AA LG+ T LIT + IG MSCNPAIGG+ KG +VRE+DAL Sbjct: 5 YDVIVIGAGHAGCEAAAAAANLGSKTCLITMDMNKIGQMSCNPAIGGIAKGQIVREVDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ-ENLDVIQGEV 124 G MG V D IQFR+LN KGPA+ PR Q DR + A REIL NL + Q V Sbjct: 65 GGYMGLVTDQTAIQFRILNRSKGPAMWSPRAQCDRNKFIWAW-REILENIPNLHIWQDTV 123 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E I+ + + R ++LT GTFL G++HIG+ ++ GRM + S L Sbjct: 124 REILVENGEITGLTTFLDVTFRAKCIILTAGTFLNGLMHIGRTQLAGGRMAEPASYELTE 183 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 S + + GR+KTGTP R+DG+++ ++ E Q + FSFM + + +Q+ C Sbjct: 184 SIARHGIEYGRMKTGTPVRIDGRSVHYEYMETQDGECDFHKFSFMDTSVRHLKQLPCWTC 243 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN E HR++ E + S +++G I+S GPRYCPSIE KIV F ++ HQ+FLEPEG T Sbjct: 244 FTNEEVHRVLREGLPDSPLFNGQIQSIGPRYCPSIETKIVTFPDKEQHQLFLEPEGETTQ 303 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y NG S++LP IQ + ++ +P + + I RPGYAIEYDY +P +L TLE+K+I L Sbjct: 304 ELYLNGFSSSLPMNIQIEALKKVPAFKDLVIYRPGYAIEYDYFDPTQLKHTLESKRIKNL 363 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ+NGTTGYEEAA QG++AGIN+ + + +R ++YIGV+IDDL +KGV EP Sbjct: 364 FFAGQVNGTTGYEEAAGQGIIAGINAHINCHGGEPFTLARDEAYIGVLIDDLVTKGVDEP 423 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR-----QKRFA-----KYIQEYNF 473 YRMFTSRAEYRI LR D+AD RLT KLG + E R +KR A ++ + Y+ Sbjct: 424 YRMFTSRAEYRILLRMDDADMRLTEKAWKLGLVKEDRYELLKRKREAISNIVEFTRNYSM 483 Query: 474 LRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVI 533 +L+ ++ + L +T + +Q K + ++ P +++N+ R+ + V Sbjct: 484 KPALINPVL---EQLGTTPL--RQGCKL---IDLINRPQVTLENMAEHVDAFRRELNKVT 535 Query: 534 ERLQ--IESS-----YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSI 586 ER + IE++ Y Y GR+ I A ++ E I F+Y+S+ +LS E ++KL Sbjct: 536 ERKEEIIEAAEILIKYEGYIGRERIIADKLARLESIKIKGKFNYNSIQSLSTEARQKLVK 595 Query: 587 LKPFNLLQASKIEGMTPAALNLLLI 611 + P + QAS+I G++P+ +N+LL+ Sbjct: 596 IDPETIAQASRIPGVSPSDINVLLV 620 >gi|34541585|ref|NP_906064.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Porphyromonas gingivalis W83] gi|81170568|sp|Q7MTG9|MNMG_PORGI RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|34397902|gb|AAQ66963.1| glucose-inhibited division protein A [Porphyromonas gingivalis W83] Length = 625 Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust. Identities = 270/625 (43%), Positives = 371/625 (59%), Gaps = 25/625 (4%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAGCEAAA AAKLG+ LIT + I MSCNPA+GG+ KG +VREIDA Sbjct: 4 NYDVIVVGAGHAGCEAAAAAAKLGSQVLLITPDMNKIAQMSCNPAVGGIAKGQIVREIDA 63 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG V DA IQFR+LN KGPA+ PR Q+DR + A + + + NL + Q V Sbjct: 64 LGGRMGIVTDATAIQFRMLNRSKGPAMWSPRAQSDRMRFMEAWRDIVEHEPNLYMWQDSV 123 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + + ++ +V + TVVLTTGTFL GV+H G+ I GR+ + + + Sbjct: 124 RCLSIRQGAVAGVVTALGVEFQARTVVLTTGTFLGGVMHFGERMIEGGRIAEPAFHGITE 183 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQIECGIT 243 F T R+KTGTPAR+DG++I + T +Q +E FS+M T + RQ C Sbjct: 184 QLRDLGFRTDRMKTGTPARIDGRSIDFSLTTEQSGEEDHHRFSYMDTPRRVLRQRSCYAL 243 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN E H I+ + + S +Y+G I+S GPRYCPSIE KIV F ++ HQ+FLEPEG ++ Sbjct: 244 YTNPECHEILSKGLDRSPLYNGQIQSIGPRYCPSIETKIVTFADKEMHQLFLEPEGETSN 303 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 Y NG S++LP EIQ + ++ IP L V+I RPGYAIEYD+ +P +L TLETK + GL Sbjct: 304 EFYLNGFSSSLPLEIQLEALKAIPALRHVHIYRPGYAIEYDFFDPTQLRHTLETKPVKGL 363 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAA QGL+AGIN+ + R ++YIGV+IDDL SKGV EP Sbjct: 364 FFAGQINGTTGYEEAAGQGLIAGINAHLHCHGAGEFTLGRDEAYIGVLIDDLVSKGVDEP 423 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL------ 477 YRMFTSRAEYRI LR D+AD RLTP +G RR ++ ++E R Sbjct: 424 YRMFTSRAEYRILLRQDDADMRLTPKAEAIGLADSRR----SELLREKQVFRDKLIDFTH 479 Query: 478 ---LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF------ 528 LK ++ S+ + KQ K Y+ L P + + S+ P ++ Sbjct: 480 KFSLKPDLINPHLESAGHLPLKQGIKL---YDLLLRPQIGMNEVCSMVPSLQRIVEEIPA 536 Query: 529 --SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSI 586 ++E +I Y Y R+ A +I E +P+ DY + +LS E ++KL+ Sbjct: 537 SRREEIVEAAEILIKYDGYIKRERALADKINRLESIRLPQHVDYMQMQSLSTEARQKLTS 596 Query: 587 LKPFNLLQASKIEGMTPAALNLLLI 611 ++P + QAS+I G++P +++LL+ Sbjct: 597 IRPETIAQASRIPGVSPHDVSILLV 621 >gi|218131739|ref|ZP_03460543.1| hypothetical protein BACEGG_03360 [Bacteroides eggerthii DSM 20697] gi|317474644|ref|ZP_07933918.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides eggerthii 1_2_48FAA] gi|217986042|gb|EEC52381.1| hypothetical protein BACEGG_03360 [Bacteroides eggerthii DSM 20697] gi|316909325|gb|EFV31005.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides eggerthii 1_2_48FAA] Length = 624 Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust. Identities = 267/624 (42%), Positives = 376/624 (60%), Gaps = 26/624 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAGCEAAA AA LG+ T LIT + IG MSCNPA+GG+ KG +VREIDAL Sbjct: 5 YDVIVIGAGHAGCEAAAAAANLGSKTCLITMDMNKIGQMSCNPAVGGIAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG V D IQFR+LN KGPA+ PR Q DR + A + + + NL + Q V Sbjct: 65 GGYMGLVTDKTAIQFRILNRSKGPAMWSPRAQCDRNKFIWAWREILENTPNLHIWQDTVQ 124 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E ++ + R +VLT GTFL G++H+G+ +P GRM + S L S Sbjct: 125 EILVENGEVTGLTTLWGVTFRAKCIVLTAGTFLNGLMHVGRTMLPGGRMAEPASYQLTES 184 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GR+KTGTP R+DG+++ ++ + Q + FSFM + + + +Q+ C Sbjct: 185 IARHGITYGRMKTGTPVRIDGRSVHYEDMDVQDGENDFHKFSFMDNGVRHLKQLPCWTCF 244 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN E HRI+ E + S +++G I+S GPRYCPSIE KIV F ++ HQ+FLEPEG T Sbjct: 245 TNEEAHRILREGLPDSPLFNGQIQSIGPRYCPSIETKIVTFPDKEQHQLFLEPEGETTQE 304 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y NG S++LP +IQ + ++ IP + I RPGYAIEYD+ +P +L TLETKKI LF Sbjct: 305 LYLNGFSSSLPMDIQIEALKKIPAFRDLVIYRPGYAIEYDFFDPTQLKHTLETKKIKNLF 364 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ+NGTTGYEEAA QG++AGIN+ + + +R ++YIGV+IDDL +KGV EPY Sbjct: 365 FAGQVNGTTGYEEAAGQGIIAGINAHINCHGGEPFTLARDEAYIGVLIDDLVTKGVDEPY 424 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGER-----RQKRFA-----KYIQEYNFL 474 RMFTSRAEYRI LR D+AD RLT KLG R KR A + + Y+ Sbjct: 425 RMFTSRAEYRILLRMDDADMRLTERAWKLGLAKNDRYELLRSKREAVTNIINFTRNYSMK 484 Query: 475 RSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSL-- 531 +L+ ++ + L +T + +Q K + ++ P +++N+ + R+ + Sbjct: 485 PALINPVL---EQLGTTPL--RQGCKL---IDLINRPQITLENMAQHVGAFHRELDKITE 536 Query: 532 ----VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSIL 587 +IE +I Y Y GR+ I A ++ E I FDY+S+ +LS E ++KL + Sbjct: 537 RKDEIIEAAEILIKYEGYIGRERIIADKLARLESIKIKGKFDYNSIQSLSTEARQKLVKI 596 Query: 588 KPFNLLQASKIEGMTPAALNLLLI 611 P + QAS+I G++P+ +N+LL+ Sbjct: 597 DPETIAQASRIPGVSPSDINVLLV 620 >gi|163786965|ref|ZP_02181413.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Flavobacteriales bacterium ALC-1] gi|159878825|gb|EDP72881.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Flavobacteriales bacterium ALC-1] Length = 586 Score = 459 bits (1181), Expect = e-127, Method: Compositional matrix adjust. Identities = 264/603 (43%), Positives = 359/603 (59%), Gaps = 44/603 (7%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M N YDVIV+G GHAG EAAA +A +G+ T LIT I MSCNPA+GG+ KG +VR Sbjct: 1 MFNDVYDVIVVGAGHAGSEAAAASANMGSKTLLITMNLQNIAQMSCNPAMGGIAKGQIVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADR----ELYRLAMQREILSQEN 116 EIDAL G G V+D + IQF++LN KGPA+ PR Q+DR E +RL ++ N Sbjct: 61 EIDALGGYSGIVSDTSAIQFKMLNKSKGPAMWSPRVQSDRMRFAEDWRLLLE----GTPN 116 Query: 117 LDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGD 176 LD Q V+G E + + + ++ TVVLT GTFL G+IHIG GR G+ Sbjct: 117 LDFYQEMVSGLIVENHKVVGVKTSLGIEVKAKTVVLTNGTFLNGLIHIGDKNFGGGRAGE 176 Query: 177 SPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITN 235 + + + FD+GR+KTGTP R+DG+++ + K +Q DE FS++ K Sbjct: 177 RAATGITEQLVNLGFDSGRMKTGTPPRVDGRSLDYSKMIEQPGDENPEKFSYLDITKPLQ 236 Query: 236 RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFL 295 Q C +T T+ + H ++ E S +++G IKS GPRYCPSIEDKI RF +++ HQ+F+ Sbjct: 237 EQRSCHMTYTSEQVHDLLREGFDRSPMFNGRIKSVGPRYCPSIEDKINRFADKDRHQLFV 296 Query: 296 EPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTL 355 EPEG NT VY NG ST+LPE++Q + +R++ G E V RPGYAIEYDY P +L TL Sbjct: 297 EPEGWNTCEVYVNGFSTSLPEDVQFKALRSVVGFENVKFFRPGYAIEYDYFPPTQLKHTL 356 Query: 356 ETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDL 415 ETK + GL+ AGQINGTTGYEEAA+QGL+AGIN++ K + + R ++YIGV+IDDL Sbjct: 357 ETKLVDGLYFAGQINGTTGYEEAASQGLMAGINASLKVQEREVFTLKRDEAYIGVLIDDL 416 Query: 416 TSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLR 475 +KG EPYRMFTSRAEYR LR DNAD RLTP G ++G +RR R + + + Sbjct: 417 ITKGTEEPYRMFTSRAEYRTLLRQDNADFRLTPKGYEIGLATKRRLSRMEEKQSKSDAFV 476 Query: 476 SLLKSL---------VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDAR 526 K VL +KN S KQ K ++ + P+ + Q D R Sbjct: 477 QFFKDTSVKPEEANPVLEAKNSSPV----KQQDK---MFKLFARPNITTQ-------DVR 522 Query: 527 KFSSL------------VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLP 574 KF+++ VIE+ +I+ YA Y ++ A ++ E IP DFDY+ L Sbjct: 523 KFNAVERYIQDNNLDTEVIEQTEIQVKYAGYIEKEKNNADKLNRLENLKIPVDFDYNKLK 582 Query: 575 ALS 577 ++S Sbjct: 583 SMS 585 >gi|281422331|ref|ZP_06253330.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prevotella copri DSM 18205] gi|281403652|gb|EFB34332.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prevotella copri DSM 18205] Length = 623 Score = 459 bits (1180), Expect = e-127, Method: Compositional matrix adjust. Identities = 249/625 (39%), Positives = 366/625 (58%), Gaps = 19/625 (3%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDV+VIGGGHAGCEAAA +A +GA T LIT + IG MSCNPAIGG+ KG +VREIDA Sbjct: 4 NYDVLVIGGGHAGCEAAAASANMGAKTCLITMDMNKIGQMSCNPAIGGIAKGQIVREIDA 63 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG V D IQFR+LN+ KGPAV PR Q DR + + + +NLD+ Q + Sbjct: 64 LGGQMGIVTDKTAIQFRMLNIGKGPAVWSPRAQCDRGKFIWEWRTILDHTDNLDIWQDQA 123 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + + ++++T GTFL G++H+G+ + GR + ++ Sbjct: 124 DELLVADGEAIGVKTIWGAEFYAKSIIITAGTFLNGLMHVGRKMVEGGRCAEPAVHNFTE 183 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S ++ T R+KTGTP R+D +++ ++ E+Q D FS+M + +Q+ C Sbjct: 184 SITRWGITTARMKTGTPVRIDKRSVHFEDMEEQPGDSDFHQFSYMGEHRVLKQLPCWTCY 243 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN + H + + S +Y+G I+S GPRYCPSIE K+V F +++ H +FLEPEG +T+ Sbjct: 244 TNKKVHETLKSGLADSPLYNGQIQSTGPRYCPSIETKLVTFPDKDQHPLFLEPEGEDTNE 303 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y NG S+++P +IQ + IP L I RPGYAIEYDY +P +L +LE+K I GLF Sbjct: 304 MYLNGFSSSMPMDIQLNALHEIPALRDAKIYRPGYAIEYDYFDPTQLKHSLESKIIKGLF 363 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ+NGTTGYEEA QG VAGIN+A +R +SYIGV+IDDLT+KGV EPY Sbjct: 364 FAGQVNGTTGYEEAGGQGTVAGINAALHCVGDKTFEMNRDESYIGVLIDDLTTKGVDEPY 423 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYRI LR D+AD RLT +LG ++ R+ +I++ + +++ Sbjct: 424 RMFTSRAEYRILLRQDDADARLTEKAYELGIA---KRDRYDWWIEKKEAIGRIIE--FCA 478 Query: 485 SKNLSSTSISFKQDGKTRTAY-------EFLSYPDFSIQNLFSICPDARKFSSL------ 531 + + I+ K + T + ++ P ++ NL I PD + + Sbjct: 479 NYPIKKDEINPKLEALGTTPLRAGCKLIDLIARPHLNLTNLSEIIPDLKTALEIPANRKE 538 Query: 532 -VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 + E +I+ Y Y R+ + A ++ E I F+YS L +S E ++KL + P Sbjct: 539 EIAEAAEIKMKYKGYIERERLIADKMHRLEDIKIKGRFNYSELHEISTEGRQKLERIDPE 598 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 L QAS+I G++P+ +N++L+ + + Sbjct: 599 TLAQASRIPGVSPSDINVMLVLLGR 623 >gi|229496352|ref|ZP_04390072.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Porphyromonas endodontalis ATCC 35406] gi|229316930|gb|EEN82843.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Porphyromonas endodontalis ATCC 35406] Length = 626 Score = 459 bits (1180), Expect = e-127, Method: Compositional matrix adjust. Identities = 268/626 (42%), Positives = 378/626 (60%), Gaps = 19/626 (3%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M YDVIV+G GHAGCEAAA AA +G+ LIT + I +SCNPA+GG+ KG +VR Sbjct: 1 MNREEYDVIVVGAGHAGCEAAAAAAAMGSRVLLITLDMNKIAQLSCNPAMGGIAKGQIVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DAL G G ++DA+ IQFR+LN KGPA+ PR Q DR + + + + NL + Sbjct: 61 EVDALGGWSGWISDASSIQFRMLNRSKGPAMWSPRAQIDRMRFMERWRETLDTIPNLHIW 120 Query: 121 QGEVAGFNTE-KNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 Q VA + K +I + CS VVLT GTFL G++H G+ IP GR+ + S Sbjct: 121 QDGVAELLVKNKRVIGVKTLLLKEFYSCS-VVLTVGTFLGGMMHFGRTMIPGGRISEPAS 179 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADE-RLIPFSFMTDKI-TNRQ 237 L T R+KTGTPAR+DG+++ W T +Q DE FS+ T+ T RQ Sbjct: 180 YGLTEQLRDLGCRTDRMKTGTPARIDGRSVDWSLTTEQKGDEGDFHHFSYCTEGANTLRQ 239 Query: 238 IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 + C I T+ E H I+ ++ S +Y+G I+S GPRYCPSIE KIV F ++ HQ+FLEP Sbjct: 240 LSCHILYTSPECHEILRASLADSPLYNGQIQSIGPRYCPSIETKIVTFADKEQHQLFLEP 299 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EG NT+ Y NG S++LP E+Q + +RT+P L V I RPGYAIEYD+ +P +L+PTL Sbjct: 300 EGENTNEYYINGFSSSLPLEVQLEALRTLPALRNVRIYRPGYAIEYDFFDPTQLYPTLAH 359 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 K + GL++AGQINGTTGYEEAA QG++AGIN+ +++ L R+++YIGV++DDL + Sbjct: 360 KLLGGLYMAGQINGTTGYEEAAGQGILAGINAHNEAHGLGDFVLQRSEAYIGVLVDDLVT 419 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL 477 KGV EPYRMFTSRAE+R LR DNAD+RLTP MKLG E R+ RF Q +++ Sbjct: 420 KGVDEPYRMFTSRAEFRTLLRQDNADDRLTPYAMKLGLASELRRNRFTYKEQMIEEVKAF 479 Query: 478 LKSLVLTSKNLSSTSISFKQDGKTRTAYEF-----LSYPDFSIQNLFSICPDARKF---- 528 + + ++S +Q G+ + L P ++ +L + P F Sbjct: 480 MAQYSVRPDRVNSL---LEQQGEQPLKHAIRLRELLLRPRLTLDHLLDVLPPFHTFVEKI 536 Query: 529 ---SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 ++ER++I+ YA Y R+ +A E + FDY SL LS E ++KL Sbjct: 537 ASQREEILERVEIDIKYAGYIEREKQQADRAMRLESITLGNRFDYLSLEQLSTEARQKLD 596 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLI 611 ++P + QA++I G++P +++LL+ Sbjct: 597 RIRPETIGQAARIPGVSPHDISVLLV 622 >gi|329960638|ref|ZP_08298981.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides fluxus YIT 12057] gi|328532511|gb|EGF59305.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides fluxus YIT 12057] Length = 632 Score = 458 bits (1179), Expect = e-127, Method: Compositional matrix adjust. Identities = 272/627 (43%), Positives = 373/627 (59%), Gaps = 32/627 (5%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAGCEAAA AA LG+ T LIT + IG MSCNPA+GG+ KG +VREIDAL Sbjct: 13 YDVIVIGAGHAGCEAAAAAANLGSKTCLITMDMNKIGQMSCNPAVGGIAKGQIVREIDAL 72 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG V D IQFR+LN KGPA+ PR Q DR + A + + + NL + Q V Sbjct: 73 GGYMGLVTDQTAIQFRILNRSKGPAMWSPRAQCDRNKFIWAWREILENTPNLSIWQDTVR 132 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + +V +VLT GTFL G++H+G+ +P GRM + S L S Sbjct: 133 EILVENGEVIGLVTLWGVTFYSKCIVLTAGTFLNGLMHVGRTMLPGGRMAEPASYQLTES 192 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 GR+KTGTP R+DG+++ ++ + Q + FSFM + + +Q+ C Sbjct: 193 IAAHGITYGRMKTGTPVRIDGRSVHYEYMDIQDGENDFHKFSFMDTGVRHLKQLPCWTCF 252 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN E HRI+ E + S +++G I+S GPRYCPSIE KIV F ++ HQ+FLEPEG T Sbjct: 253 TNEEAHRILREGLPDSPLFNGQIQSIGPRYCPSIETKIVTFPDKPQHQLFLEPEGETTQE 312 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y NG S++LP +IQ ++ IP + + I RPGYAIEYDY +P +L TLETKKI LF Sbjct: 313 LYLNGFSSSLPLDIQIAALKKIPAFKDLVIYRPGYAIEYDYFDPTQLKHTLETKKIKNLF 372 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAA QG++AGIN+ + + +R ++YIGV+IDDL +KGV EPY Sbjct: 373 FAGQINGTTGYEEAAGQGIIAGINAHINCHGGEPFTLARDEAYIGVLIDDLVTKGVDEPY 432 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR-----QKRFA-----KYIQEYNFL 474 RMFTSRAEYRI LR D+AD RLT KLG + + R QKR A + + Y+ Sbjct: 433 RMFTSRAEYRILLRMDDADMRLTEKAWKLGLVKKERYELLTQKREAVNRIIDFARNYSMK 492 Query: 475 RSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS---- 530 +L+ ++ + L +T + +Q K + ++ P +I+N I + F Sbjct: 493 PTLINPVL---EQLGTTPL--RQGCKL---IDLINRPQVTIEN---IAEHVKAFKQELDK 541 Query: 531 ------LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKL 584 +IE +I Y Y GR+ I A ++ E I FDY S+ +LS E ++KL Sbjct: 542 ISDRKEEIIEAAEILIKYEGYIGRERIIADKLARLESIKIKGKFDYESIQSLSTEARQKL 601 Query: 585 SILKPFNLLQASKIEGMTPAALNLLLI 611 + P + QAS+I G++P+ +N+LL+ Sbjct: 602 VKIDPETIAQASRIPGVSPSDINVLLV 628 >gi|307108896|gb|EFN57135.1| hypothetical protein CHLNCDRAFT_30521 [Chlorella variabilis] Length = 791 Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust. Identities = 250/627 (39%), Positives = 366/627 (58%), Gaps = 20/627 (3%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDV+V+GGGHAGCEAA +A+LG T L+T I CNPA+GG K LV E+DA Sbjct: 115 AYDVVVVGGGHAGCEAALASARLGCKTLLLTLNLDRIAWQPCNPAVGGPAKSQLVHEVDA 174 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G +G++AD +Q RVLN KGPAV R Q D+ Y M+R + NL + +G V Sbjct: 175 LGGEIGKMADRCYLQKRVLNHSKGPAVWALRAQTDKIEYAAGMRRVLEHSPNLFIREGMV 234 Query: 125 AGFNTEKN-IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 G + N + + C VLTTGTF+ G I +G+ + AGR G++ S L Sbjct: 235 TGVEVDGNDQVCGVSTFFGITFPCKAAVLTTGTFMNGQIWVGRQSMSAGRAGEAASTGLT 294 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR---QIEC 240 M+ F+T RLKTGTPAR+D +T+ + E+Q DE + FSF D +R Q+ C Sbjct: 295 ERLMELGFETDRLKTGTPARVDKRTVNFAGLEEQPGDEEVRWFSF--DPAVHRPRPQLPC 352 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +T T ETHRI+ +N+ + +Y G + + GPRYCPSIEDKIVRF ++ HQ+FLEPE Sbjct: 353 HLTHTTAETHRILRDNLHETPVYGGWLDAKGPRYCPSIEDKIVRFADKESHQVFLEPESR 412 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 +T +Y G ST LPE +Q + ++PGLE+ ++RP YA+EYDY+ + +LETK++ Sbjct: 413 STPELYVQGFSTGLPERLQLALLHSLPGLERCKMLRPAYAVEYDYLPAHQCHASLETKRV 472 Query: 361 SGLFLAGQINGTTGYE------EAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDD 414 GLF +GQ+NGTTG EAAAQGLVAG+N+AR++ +L + R SYIG ++DD Sbjct: 473 GGLFFSGQLNGTTGKHAFRSGAEAAAQGLVAGLNAARRAQELPPVVLPRESSYIGTLLDD 532 Query: 415 LTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFL 474 L +K + EPYRM TSR+EYR+ LR DNAD RLTP+G +LG + +RR F + Sbjct: 533 LVTKDLREPYRMLTSRSEYRLVLRSDNADRRLTPLGRQLGLVDDRRWGLFQAKQARIDGE 592 Query: 475 RSLLKS--------LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDAR 526 R L++ L ++ SS ++ + YP + + Sbjct: 593 RRRLEAARVPAGHPLTAAAEAASSQTVPPLVTLADLLRRPHVHYPLLEAHGMGAPPLAPA 652 Query: 527 KFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSI 586 ++ E ++++ Y + RQ + + + + IP DY ++ LS E +EKLS Sbjct: 653 ALTAAEKESVEVDIKYEGFIRRQAKQLASVAAKHAKRIPDTLDYHAIHTLSMEAREKLSK 712 Query: 587 LKPFNLLQASKIEGMTPAALNLLLIYI 613 ++P ++ QAS+I G+ P+ ++ LL+++ Sbjct: 713 IRPRDIGQASRIGGVNPSDISNLLVHL 739 >gi|255010265|ref|ZP_05282391.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides fragilis 3_1_12] gi|313148060|ref|ZP_07810253.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides fragilis 3_1_12] gi|313136827|gb|EFR54187.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides fragilis 3_1_12] Length = 625 Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust. Identities = 271/630 (43%), Positives = 376/630 (59%), Gaps = 37/630 (5%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAGCEAAA AA LG+ T LIT + + MSCNPA+GG+ KG +VREIDAL Sbjct: 5 YDVIVIGAGHAGCEAAAAAANLGSKTCLITMDMNKVAQMSCNPAVGGIAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ-ENLDVIQGEV 124 G MG V D IQFR+LN KGPA+ PR Q DR + + REIL NL + Q V Sbjct: 65 GGYMGLVTDQTAIQFRILNRSKGPAMWSPRAQCDRNKF-IWTWREILENIPNLHIWQDTV 123 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + + +VLT GTFL G++H+GK K+P GRM + S L Sbjct: 124 KEIIVENGEVVGLKTFWDVTFHAKCIVLTAGTFLNGLMHVGKTKLPGGRMAEPASYELTE 183 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 S K + GR+KTGTP R+DG+++ ++ + Q + FSFM + + +Q++C Sbjct: 184 SIAKHGVEYGRMKTGTPVRIDGRSVHYELMDTQDGECDFHKFSFMNTSVRHLKQLQCWTC 243 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN E H I+ + S +++G I+S GPRYCPSIE KIV F ++ HQ+FLEPEG T Sbjct: 244 FTNEEVHDILRNGLSDSPLFNGQIQSIGPRYCPSIETKIVTFPDKEQHQLFLEPEGETTQ 303 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y NG S++LP +IQ + ++ IP + + I RPGYAIEYDY +P +L TLE+KKI L Sbjct: 304 ELYLNGFSSSLPMDIQIKALKKIPAFKDLVIYRPGYAIEYDYFDPTQLKHTLESKKIRNL 363 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ+NGTTGYEEA QG++AGIN+ + + +R ++YIGV+IDDL +KGV EP Sbjct: 364 FFAGQVNGTTGYEEAGGQGIIAGINAHINCHGGEPFTLARDEAYIGVLIDDLVTKGVDEP 423 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRS---LLKS 480 YRMFTSRAEYRI LR D+AD RLT KLG + E R Y L+S ++S Sbjct: 424 YRMFTSRAEYRILLRMDDADMRLTERAYKLGLVKEDR----------YALLKSKREAIES 473 Query: 481 LVLTSKNLSSTSI----SFKQDGKTRTAY-----EFLSYPDFSIQNLFSICP-------- 523 +V ++N S + + ++ G T + + ++ P +I+N+ P Sbjct: 474 IVNFARNYSIKAALINDALEKLGTTPLRHGCKLIDLINRPQITIENISEHIPAFKRELEK 533 Query: 524 --DARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELK 581 D RK ++E +I Y Y GR+ I A ++ E I FDY +L +LS E + Sbjct: 534 ITDERK--DEILEAAEILIKYEGYIGRERIIADKLARLESIKIKGKFDYDNLQSLSTEAR 591 Query: 582 EKLSILKPFNLLQASKIEGMTPAALNLLLI 611 +KL + P + QAS+I G++P+ +N+LL+ Sbjct: 592 QKLKKIDPETIAQASRIPGVSPSDINVLLV 621 >gi|260221689|emb|CBA30505.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Curvibacter putative symbiont of Hydra magnipapillata] Length = 628 Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust. Identities = 257/617 (41%), Positives = 354/617 (57%), Gaps = 56/617 (9%) Query: 57 HLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQEN 116 HLV+E+DA+ G M D AGIQFR+LN KGPAVR R QADR LY+ A++R + +Q N Sbjct: 5 HLVKEVDAMGGAMALATDEAGIQFRILNSSKGPAVRATRAQADRVLYKAAIRRMLENQPN 64 Query: 117 LDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGD 176 L + Q V E + + V Q R TVVLT GTFL G IH+G AGR GD Sbjct: 65 LSLFQQAVDDLMVEGDRVVGAVTQVGIRFRGKTVVLTAGTFLDGKIHVGLNNYAAGRAGD 124 Query: 177 SPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFAD------ERLIPF-SFM 229 P+ SL + GRLKTGTP R+DG++I + K +Q D ++P SFM Sbjct: 125 PPAVSLSARLKELKLPQGRLKTGTPPRIDGRSIDFSKCIEQPGDGVPGGMSDVMPVVSFM 184 Query: 230 TD-KITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGER 288 + + +Q+ C IT TN TH II S +++G I+ GPRYCPS+EDKI RF ++ Sbjct: 185 GNVAMHPQQVPCWITHTNERTHDIIRSGFDRSPMFTGKIEGVGPRYCPSVEDKINRFADK 244 Query: 289 NGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINP 348 + HQIFLEPEGL T YPNGIST+LP +IQ++ +R++ GLE +I+RPGYAIEYDY +P Sbjct: 245 DSHQIFLEPEGLTTHEYYPNGISTSLPFDIQYELVRSMAGLENAHILRPGYAIEYDYFDP 304 Query: 349 KELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKL------------ 396 + L + ET++I GLF AGQINGTTGYEEAAAQG+ AGIN+A + + Sbjct: 305 RSLKGSFETRQIGGLFFAGQINGTTGYEEAAAQGMFAGINAALQVRAMGGGDVALSAAGS 364 Query: 397 -----DCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGM 451 D R +Y+GV++DDL +KGV EPYRMFTSRAE+R+ LR DNAD RLT +G Sbjct: 365 ASYSDDTWLPGRDQAYLGVLVDDLITKGVTEPYRMFTSRAEFRLQLREDNADARLTEVGR 424 Query: 452 KLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLS---STSISFKQDGKTRTAYEFL 508 +LG + R F + + L+S + +NL+ S + K + L Sbjct: 425 ELGLVDNARWDAFCRKRDAVSRETERLRSTWVNPRNLAADESERVLGKSIEHEYNLADLL 484 Query: 509 SYPDFSIQNLFSICPDARKFSS--------------------------LVIERLQIESSY 542 P+ S L S+ D K+++ V+E+++I + Y Sbjct: 485 RRPNVSYGGLMSL--DHGKYANRDLLDVVSRETAGLPTVDAAEVAFVAAVVEQVEIAAKY 542 Query: 543 AAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMT 602 + Y RQ E + E +P D DY + ALS E +++LS +P L QAS++ G+T Sbjct: 543 SGYINRQKDEVERAAHYENLRLPDDLDYMQVTALSIEARQRLSKYRPETLGQASRLSGIT 602 Query: 603 PAALNLLLIYIKKNTVK 619 PA ++LL+I++KK + Sbjct: 603 PATISLLMIHLKKGNFR 619 >gi|329956355|ref|ZP_08296952.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides clarus YIT 12056] gi|328524252|gb|EGF51322.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides clarus YIT 12056] Length = 624 Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust. Identities = 267/624 (42%), Positives = 375/624 (60%), Gaps = 26/624 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAGCEAAA AA LG+ T LIT + IG MSCNPA+GG+ KG +VREIDAL Sbjct: 5 YDVIVIGAGHAGCEAAAAAANLGSKTCLITMDMNKIGQMSCNPAVGGIAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG V D IQFR+LN KGPA+ PR Q DR + A + + + NL + Q + Sbjct: 65 GGYMGLVTDKTAIQFRILNRSKGPAMWSPRAQCDRNKFIWAWREILENTPNLHIWQDTIC 124 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + R VVLT GTFL G++H+G +P GRM + S L S Sbjct: 125 EILVENGEVVGLTTLWGVTFRSKCVVLTAGTFLNGLMHVGHTMLPGGRMAEPASYQLTES 184 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GR+KTGTP R+DG+++ ++ + Q + FSFM + + + +Q+ C Sbjct: 185 IARHGITYGRMKTGTPVRIDGRSVHYEDMDIQDGENDFHKFSFMNNGVRHLKQLPCWTCF 244 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN E HRI+ E + S +++G I+S GPRYCPSIE KIV F ++ HQ+FLEPEG T Sbjct: 245 TNEEAHRILREGLPDSPLFNGQIQSIGPRYCPSIETKIVTFPDKEQHQLFLEPEGETTQE 304 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y NG S++LP IQ + ++ IP + I RPGYAIEYD+ +P +L TLETKKI LF Sbjct: 305 LYLNGFSSSLPMNIQIEALKKIPAFRDLVIYRPGYAIEYDFFDPTQLKHTLETKKIKNLF 364 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ+NGTTGYEEAA QG++AGIN+ + + +R ++YIGV+IDDL +KGV EPY Sbjct: 365 FAGQVNGTTGYEEAAGQGIIAGINAHINCHGGEPFTLARDEAYIGVLIDDLVTKGVDEPY 424 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGER-----RQKRFA-----KYIQEYNFL 474 RMFTSRAEYRI LR D+AD RLT KLG + R KR A ++ + Y+ Sbjct: 425 RMFTSRAEYRILLRMDDADMRLTERAWKLGLAQKDRYELLRSKREAVTNIIEFTRNYSMK 484 Query: 475 RSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSL-- 531 +L+ ++ + L +T + +Q K + ++ P +++N+ + R+ + Sbjct: 485 PTLINPVL---EQLGTTPL--RQGCK---LIDLINRPQVTLENMAEHVSAFRRELDKITD 536 Query: 532 ----VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSIL 587 +IE +I Y Y GR+ I A ++ E I FDY+S+ +LS E ++KL + Sbjct: 537 RKDEIIEAAEILIKYEGYIGRERIIADKLARLESIKIKGKFDYNSIQSLSTEARQKLVKI 596 Query: 588 KPFNLLQASKIEGMTPAALNLLLI 611 P + QAS+I G++P+ +N+LL+ Sbjct: 597 DPETIAQASRIPGVSPSDINVLLV 620 >gi|150003782|ref|YP_001298526.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides vulgatus ATCC 8482] gi|294777394|ref|ZP_06742845.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides vulgatus PC510] gi|166222908|sp|A6KZP0|MNMG_BACV8 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|149932206|gb|ABR38904.1| glucose-inhibited division protein A [Bacteroides vulgatus ATCC 8482] gi|294448462|gb|EFG17011.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides vulgatus PC510] Length = 623 Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust. Identities = 261/622 (41%), Positives = 366/622 (58%), Gaps = 15/622 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAGCEAAA AA +G+ T LIT + IG MSCNPA+GG+ KG +VREIDAL Sbjct: 5 YDVIVIGAGHAGCEAAAAAANMGSKTCLITMDMNKIGQMSCNPAVGGIAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG V D IQFR+LN KGPA+ PR Q DR + A + + + NL + Q V Sbjct: 65 GGYMGLVTDRTAIQFRMLNRSKGPAMWSPRAQCDRGKFIWAWREILENTPNLHIWQDTVE 124 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + ++ +VLT GTFL G++HIG ++ GRM + S L S Sbjct: 125 ELIVENGEATGVMTCWGVTFHAKCIVLTAGTFLNGLMHIGHKQLAGGRMAEPASYHLTES 184 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + GR+KTGTP R+DG+++ +D E Q + FSFM++ +Q++C T Sbjct: 185 ITRHGITAGRMKTGTPVRIDGRSVHYDLMETQDGENDFHRFSFMSEPRKLKQLQCWTCFT 244 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N E H I+ + + S +++G I+S GPRYCPSIE KIV F ++ HQ+FLEPEG T + Sbjct: 245 NEEVHEILRKGLPDSPLFNGQIQSIGPRYCPSIETKIVTFPDKPQHQLFLEPEGETTQEL 304 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG S++LP +IQ ++ +P + + + RPGYAIEYDY +P +L TLE+K I LFL Sbjct: 305 YLNGFSSSLPMDIQLAALKKVPAFKDLVVYRPGYAIEYDYFDPTQLKHTLESKIIKNLFL 364 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ+NGTTGYEEA QG++AGIN+ + + R ++YIGV+IDDL +KGV EPYR Sbjct: 365 AGQVNGTTGYEEAGGQGIIAGINAHINCHGGEPFTLGRDEAYIGVLIDDLVTKGVDEPYR 424 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAEYRI LR D+AD RLT KLG + + R + + N + K+ + + Sbjct: 425 MFTSRAEYRILLRQDDADMRLTERAYKLGLVKQDRYEHLCSKREAVNQIIDFAKTFSIKA 484 Query: 486 KNLSSTSISFKQDGKTRTAY-----EFLSYPDFSIQNLFSICPDARKF-------SSLVI 533 ++ S G R + + L+ P +I+N+ P + VI Sbjct: 485 ALINDALESL---GTARLTHGCKLIDLLNRPQITIENIAGHIPAFKAMLDQITDRKEEVI 541 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E ++ Y Y R+ + A +I E I FDY+SL +LS E ++KL + P L Sbjct: 542 EAAEVLIKYQGYIDRERMIADKIHRLEAIRIKGKFDYNSLNSLSTEARQKLMKIDPETLA 601 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I G++P+ +N+LL+ + + Sbjct: 602 QASRIPGISPSDINVLLVLLGR 623 >gi|188995801|ref|YP_001930053.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Porphyromonas gingivalis ATCC 33277] gi|188595481|dbj|BAG34456.1| glucose-inhibited division protein A [Porphyromonas gingivalis ATCC 33277] Length = 625 Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust. Identities = 268/622 (43%), Positives = 372/622 (59%), Gaps = 19/622 (3%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAGCEAAA AAKLG+ LIT + I MSCNPA+GG+ KG +VREID+ Sbjct: 4 NYDVIVVGAGHAGCEAAAAAAKLGSQVLLITPDMNKIAQMSCNPAVGGIAKGQIVREIDS 63 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG V DA IQFR+LN KGPA+ PR Q+DR + A + + + NL + Q V Sbjct: 64 LGGRMGIVTDATAIQFRMLNRSKGPAMWSPRAQSDRMRFMEAWRDIVEHEPNLYMWQDSV 123 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + + ++ +V + TVVLTTGTFL GV+H G+ I GR+ + + + Sbjct: 124 RCLSIRQGAVAGVVTALGVEFQARTVVLTTGTFLGGVMHFGERMIEGGRIAEPAFHGITE 183 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQIECGIT 243 F T R+KTGTPAR+DG++I + T +Q +E FS+M T + RQ C Sbjct: 184 QLRDLGFRTDRMKTGTPARIDGRSIDFSLTTEQSGEEDHHRFSYMDTPRRVLRQRSCYAL 243 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN E H I+ + + S +Y+G I+S GPRYCPSIE KIV F ++ HQ+FLEPEG ++ Sbjct: 244 YTNPECHEILSKGLDRSPLYNGQIQSIGPRYCPSIETKIVTFADKEMHQLFLEPEGETSN 303 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 Y NG S++LP EIQ + ++ IP L V+I RPGYAIEYD+ +P +L TLETK + GL Sbjct: 304 EFYLNGFSSSLPLEIQLEALKAIPALRHVHIYRPGYAIEYDFFDPTQLRHTLETKPVKGL 363 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAA QGL+AGIN+ + + R ++YIGV+IDDL SKGV EP Sbjct: 364 FFAGQINGTTGYEEAAGQGLIAGINAHLQCHGAGEFTLGRDEAYIGVLIDDLVSKGVDEP 423 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR------QKRFAKYIQEYNFLRSL 477 YRMFTSRAEYRI LR D+AD RLTP +G RR ++ F + ++ SL Sbjct: 424 YRMFTSRAEYRILLRQDDADMRLTPKAEAIGLADSRRCELLREKQVFRDKLIDFTHKFSL 483 Query: 478 LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF--------S 529 L+ S+ + KQ K Y+ L P + + ++ P ++ Sbjct: 484 KPDLI-NPHLESAGHLPLKQGIKL---YDLLLRPQIGMNEVCTMVPSLQRIVEEIPASRR 539 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 ++E +I Y Y R+ A +I E +P+ DY + +LS E ++KL+ ++P Sbjct: 540 EEIVEAAEILIKYDGYIKRERALADKINRLESIRLPQHVDYMQMQSLSTEARQKLTSIRP 599 Query: 590 FNLLQASKIEGMTPAALNLLLI 611 + QAS+I G++P +++LL+ Sbjct: 600 ETIAQASRIPGVSPHDVSILLV 621 >gi|224536936|ref|ZP_03677475.1| hypothetical protein BACCELL_01812 [Bacteroides cellulosilyticus DSM 14838] gi|224521423|gb|EEF90528.1| hypothetical protein BACCELL_01812 [Bacteroides cellulosilyticus DSM 14838] Length = 624 Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust. Identities = 262/618 (42%), Positives = 370/618 (59%), Gaps = 14/618 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAGCEAAA AA LG+ T LIT + IG MSCNPA+GG+ KG +VRE+DAL Sbjct: 5 YDVIVIGAGHAGCEAAAAAANLGSKTCLITMDMNKIGQMSCNPAVGGIAKGQIVREVDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG V D IQFR+LN KGPA+ PR Q DR + A + + + NL + Q V Sbjct: 65 GGYMGLVTDQTAIQFRILNRSKGPAMWSPRAQCDRNKFIWAWREILENTPNLHIWQDTVR 124 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + R +VLT GTFL G++H+G+ K+ GRM + S L S Sbjct: 125 EILVENGEVVGLTTLLDVTFRAKCIVLTAGTFLNGLMHVGRTKLAGGRMAEPASYELTES 184 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + + GR+KTGTP R+DG+++ ++ E Q + FSF+ + + +Q+ C Sbjct: 185 IARHGIEYGRMKTGTPVRIDGRSVHYEYMETQDGECDFHKFSFLDTSVRHLKQLPCWTCF 244 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN E HR++ E + S +++G I+S GPRYCPSIE KIV F ++ HQ+FLEPEG T Sbjct: 245 TNEEVHRVLREGLPDSPLFNGQIQSIGPRYCPSIETKIVTFPDKEQHQLFLEPEGETTQE 304 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y NG S++LP IQ + ++ +P + + I RPGYAIEYDY +P +L TLETKKI LF Sbjct: 305 LYLNGFSSSLPMNIQIEALKKVPAFKDLVIYRPGYAIEYDYFDPTQLKHTLETKKIKNLF 364 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ+NGTTGYEEAA QG++AGIN+ + + +R ++YIGV+IDDL +KGV EPY Sbjct: 365 FAGQVNGTTGYEEAAGQGIIAGINAHINCHGGEPFTLARDEAYIGVLIDDLVTKGVDEPY 424 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYN----FLRSLLKS 480 RMFTSRAEYRI LR D+AD RLT KLG + R + + N F R+ Sbjct: 425 RMFTSRAEYRILLRMDDADMRLTEKAWKLGLVKSDRYELLKRKRDSINSIIEFTRNYSMK 484 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ--I 538 L + L + + G + ++ P +++N+ R+ V ER + I Sbjct: 485 PALINPVLEQLGTTPLRQGC--KLIDLINRPQVTLENMAEHVSAFRRELDKVTERKEEII 542 Query: 539 ESS-----YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E++ Y Y GR+ + A ++ E I FDY+++ +LS E ++KL + P + Sbjct: 543 EAAEILIKYEGYIGRERMIADKLARLESIKIKGKFDYNAIQSLSTEARQKLVKIDPETIA 602 Query: 594 QASKIEGMTPAALNLLLI 611 QAS+I G++P+ +N+LL+ Sbjct: 603 QASRIPGVSPSDINVLLV 620 >gi|160331657|ref|XP_001712535.1| gidA [Hemiselmis andersenii] gi|159765984|gb|ABW98210.1| gidA [Hemiselmis andersenii] Length = 653 Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust. Identities = 262/615 (42%), Positives = 368/615 (59%), Gaps = 6/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+VIGGGHAG E+A +AK GA T LIT IG CNP+IGG K LV EIDAL Sbjct: 40 YDVVVIGGGHAGIESALASAKRGAFTLLITLNLDKIGWQPCNPSIGGPAKSTLVHEIDAL 99 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG++AD + R+LN KGPAV R Q D++ Y ++ + + NL + +G V+ Sbjct: 100 GGGMGKIADRTFLHKRILNKSKGPAVWALRVQTDKKEYSEENKKMLDNYPNLTIQEGMVS 159 Query: 126 GFNTEKNI-ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 K+ + I +IRC T ++TTGTFL G I IG KI AGR G+ S L Sbjct: 160 DILISKSFKLKGIKTYFGGIIRCKTAIVTTGTFLGGTIWIGSKKISAGRAGEMASIGLTQ 219 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGIT 243 + +F T RLKTGTP R+D + I +K EKQ +DE FSF + +R+ ++C +T Sbjct: 220 TLRNLEFKTSRLKTGTPPRIDSRHINLEKIEKQKSDETENWFSFDRMEWNSRKTMDCFLT 279 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 T T +I +N+ S Y G +KS GPRYCPSIEDKIVRF ++ HQIFLEPEG + Sbjct: 280 HTTSRTFALIRKNLHLSPKYGGFMKSTGPRYCPSIEDKIVRFFDKKEHQIFLEPEGRILN 339 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y GIST LPE +Q + I+TIPGLE ++RP Y+++YDYI +L L +K + GL Sbjct: 340 EIYVQGISTGLPENLQIEIIKTIPGLENSKMVRPAYSVDYDYIFASQLDKNLMSK-VEGL 398 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQI GTTGYEEA AQG++AG+N++ K + IC SR S+IG +IDDL +K + EP Sbjct: 399 FFAGQICGTTGYEEAGAQGILAGLNASLFCEKKNMICLSREGSFIGNLIDDLCTKQLKEP 458 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEY-NFLRSLLKSLV 482 YR+ TSR+E+R+ LR DNAD RLTP+G K G + +R+ K+F IQ N R L K+ + Sbjct: 459 YRVLTSRSEFRLLLRSDNADFRLTPLGRKYGLVNDRKWKKFKNKIQRIENESRRLNKTFI 518 Query: 483 -LTSKNLSSTSISFKQDGKTRTAY-EFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + SK L K ++ + + P+F L ++ + I+RL+IE Sbjct: 519 KVNSKILKILESEIGNIVKKESSLAKLIGRPNFDFFQLNNLDLQNTSLNYEEIQRLEIEI 578 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ ++ K + I K+ ++ + LS E +EKL+ +P +L +A KI G Sbjct: 579 KYLNYIERQELQIKNVDRIMNTQIKKNINFMKITQLSKEGREKLTKRRPVDLREALKIGG 638 Query: 601 MTPAALNLLLIYIKK 615 ++ + + L ++ ++ Sbjct: 639 ISASDIQTLFLFTRQ 653 >gi|302787481|ref|XP_002975510.1| hypothetical protein SELMODRAFT_415636 [Selaginella moellendorffii] gi|300156511|gb|EFJ23139.1| hypothetical protein SELMODRAFT_415636 [Selaginella moellendorffii] Length = 1151 Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust. Identities = 258/610 (42%), Positives = 358/610 (58%), Gaps = 27/610 (4%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 S+DVIV+GGGHAGCEAA AA++GA T ++T I CNPA+GG K LV E+DA Sbjct: 49 SFDVIVVGGGHAGCEAALAAARMGARTLMLTLNLDRIAWQPCNPAVGGPAKSQLVHEVDA 108 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G +G++ D +Q RVLN KGPAV R Q D+ Y M++ + + ENL Sbjct: 109 LGGEIGKITDKCYLQKRVLNRSKGPAVWALRAQTDKREYAREMKKVVETTENL------- 161 Query: 125 AGFNTEKNIISSIVMQDNSMIRCST----------VVLTTGTFLRGVIHIGKLKIPAGRM 174 F E + +V +++++ T VVLTTGTF+ G I +G+ + AGR Sbjct: 162 --FIRESMVTEVLVGRNDNVEGVGTFFGVSFFAPAVVLTTGTFMNGKIWVGRKSMSAGRA 219 Query: 175 GDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT 234 G+S S L + F F+T RLKTGTPAR+D +T+ + E Q D+ + FSF Sbjct: 220 GESASQGLTENLQSFGFETDRLKTGTPARVDVRTVDTSRLESQPGDDEVRWFSFDPAAHV 279 Query: 235 NR-QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQI 293 R Q C ITRT ETHR+I EN+ + Y G ++S GPRYCPSIEDKIVRF +++ HQI Sbjct: 280 ERAQQCCYITRTTPETHRLINENLLETPTYGGWVESKGPRYCPSIEDKIVRFKDKDSHQI 339 Query: 294 FLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFP 353 FLEPEG + +Y G ST LPE +Q ++T+PGLE ++RP YA+EYDY+ + +P Sbjct: 340 FLEPEGRSVPELYVQGFSTGLPERLQLALLQTLPGLEHCAMLRPAYAVEYDYLPANQCYP 399 Query: 354 TLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMID 413 TL TKK+ GL+ +GQINGTTGYEEAAAQG VAG+N+AR K D R SYIG +ID Sbjct: 400 TLMTKKLEGLYFSGQINGTTGYEEAAAQGFVAGVNAARYCCKKDSFVLERESSYIGTLID 459 Query: 414 DLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNF 473 DL +K + EPYR+ R+E+R+ LR DNAD+RLTP+G LG I +RR + + + Sbjct: 460 DLVTKNLREPYRI---RSEHRLLLRADNADSRLTPVGRDLGLIDDRRWSLYQEKQSRISD 516 Query: 474 LRSLLKSLVLTSKNLSSTSISFKQ---DGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS 530 + L++ S+ +++ + DG L P + L S Sbjct: 517 DKKRLQTTRYCSEKMNAEVLQLSGQPVDGPVLLNM-LLKRPHVHYELLDKHGAGNPLLSR 575 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 E ++I+ Y RQ I+ K++ + + IP DY+S+ LS E +EKL+ ++P Sbjct: 576 EEKECVEIDIKYEGLIARQTIQLKQMALKLHKEIPDSVDYTSVATLSKEAREKLTQIRPR 635 Query: 591 NLLQASKIEG 600 N+ QAS+I G Sbjct: 636 NIGQASRIGG 645 >gi|302823766|ref|XP_002993532.1| hypothetical protein SELMODRAFT_449154 [Selaginella moellendorffii] gi|300138663|gb|EFJ05424.1| hypothetical protein SELMODRAFT_449154 [Selaginella moellendorffii] Length = 1256 Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust. Identities = 256/609 (42%), Positives = 357/609 (58%), Gaps = 27/609 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAGCEAA AA++GA T ++T I CNPA+GG K LV E+DAL Sbjct: 50 FDVIVVGGGHAGCEAALAAARMGARTLMLTLNLDRIAWQPCNPAVGGPAKSQLVHEVDAL 109 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G +G++ D +Q RVLN KGPAV R Q D+ Y M++ + + ENL Sbjct: 110 GGEIGKITDKCYLQKRVLNRSKGPAVWALRAQTDKREYAREMKKVVETTENL-------- 161 Query: 126 GFNTEKNIISSIVMQDNSMIRCST----------VVLTTGTFLRGVIHIGKLKIPAGRMG 175 F E + +V +++++ T VVLTTGTF+ G I +G+ + AGR G Sbjct: 162 -FIRESMVTEVLVGRNDNVEGVGTFFGVNFFAPAVVLTTGTFMNGKIWVGRKSMSAGRAG 220 Query: 176 DSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN 235 +S S L + F F+T RLKTGTPAR+D +T+ + E Q DE + FSF Sbjct: 221 ESASQGLTENLQSFGFETDRLKTGTPARVDVRTVDTSRLESQPGDEEVRWFSFDPAAHVE 280 Query: 236 RQIECG-ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 R +C ITRT ETHR+I EN+ + Y G ++S GPRYCPSIEDKIVRF +++ HQIF Sbjct: 281 RDQQCCYITRTTPETHRLINENLLETPTYGGWVESKGPRYCPSIEDKIVRFKDKDSHQIF 340 Query: 295 LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT 354 LEPEG + +Y G ST LPE +Q ++T+PGLE ++RP YA+EYDY+ + +PT Sbjct: 341 LEPEGRSVPELYVQGFSTGLPERLQLALLQTLPGLEHCAMLRPAYAVEYDYLPANQCYPT 400 Query: 355 LETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDD 414 L TKK+ GL+ +GQINGTTGYEEAAAQG VAG+N+AR K D R SYIG +IDD Sbjct: 401 LMTKKLEGLYFSGQINGTTGYEEAAAQGFVAGVNAARYCCKKDSFVLERESSYIGTLIDD 460 Query: 415 LTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFL 474 L +K + EPYR+ R+E+R+ LR DNAD+RLTP+G LG I +RR + + + Sbjct: 461 LVTKNLREPYRI---RSEHRLLLRADNADSRLTPVGRDLGLIDDRRWSLYQEKQSRISDD 517 Query: 475 RSLLKSLVLTSKNLSSTSISFKQ---DGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL 531 + L++ S+ +++ + DG L P + L S Sbjct: 518 KKRLQTTRYCSEKMNAEVLQLSGQPVDGPVLLNM-LLKRPHVHYELLDKHGAGNPLLSRE 576 Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 E ++I+ Y RQ ++ K++ + + IP DY+S+ LS E +EKL+ ++P N Sbjct: 577 EKECVEIDIKYEGLIARQTMQLKQMALKLHKEIPDSVDYTSVATLSKEAREKLTQIRPRN 636 Query: 592 LLQASKIEG 600 + QAS+I G Sbjct: 637 IGQASRIGG 645 >gi|291457895|ref|ZP_06597285.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Oribacterium sp. oral taxon 078 str. F0262] gi|291419439|gb|EFE93158.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Oribacterium sp. oral taxon 078 str. F0262] Length = 642 Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust. Identities = 258/631 (40%), Positives = 373/631 (59%), Gaps = 15/631 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M SYDV V+G GHAG EAA A+LG T + I M CNP IGG KGHLVR Sbjct: 14 MTELSYDVAVVGAGHAGVEAALACARLGLKTIMFCLSADHIAMMPCNPNIGGSSKGHLVR 73 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DAL G MG+ D +Q R+LN KGPAV R QAD++ Y M+R + +QENL + Sbjct: 74 ELDALGGEMGKNIDKTFLQSRMLNRSKGPAVHSLRAQADKQEYMKEMRRTVENQENLTIR 133 Query: 121 QGEVAGF-----NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMG 175 Q E+ E+ I + + VVL TG +L G++ G G Sbjct: 134 QAEITELLLKESEGEREIFG-VRDAAGTDFFARAVVLCTGVYLNSRCIYGEVSEDTGPNG 192 Query: 176 DSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD--KI 233 + L + R KTGTPAR+DG+TI + K E Q D +IPFSF TD + Sbjct: 193 LRNAGHLSGFLRRAGVRMLRFKTGTPARIDGRTIDFSKMEIQKGDRPVIPFSFSTDPDTV 252 Query: 234 TNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQI 293 QI+C +T TN +TH II +NI+ S +Y+G+I+ GPRYCPSIEDK++RF E+ HQI Sbjct: 253 QKEQIDCYLTYTNEKTHEIIRKNIERSPMYNGEIEGTGPRYCPSIEDKVMRFPEKERHQI 312 Query: 294 FLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFP 353 F+EPEGL T+ +Y +G+S++LPE++Q R++ GLE+ I+R YAIEYD I+ ++L Sbjct: 313 FIEPEGLYTNEMYLSGMSSSLPEDVQIDMYRSMEGLERAEIVRNAYAIEYDCIDSQQLKS 372 Query: 354 TLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMID 413 +LE + I GLF GQ NG++GYEEAA QG +AG+N+A + + R+++YIGV+ID Sbjct: 373 SLEFQTIRGLFSGGQFNGSSGYEEAAVQGFMAGVNAAMRCLGKKAVVLDRSEAYIGVLID 432 Query: 414 DLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIG-----ERRQKRFAKYI 468 DL +K EPYRM TSRAEYR+ LR DNAD RL IG ++G I + ++K+ A Sbjct: 433 DLVTKENREPYRMMTSRAEYRLLLRQDNADLRLREIGYRIGLISAEELRKTQEKKLAIER 492 Query: 469 QEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF 528 + +S + T++ L + + G + E P+ + ++L + PD + Sbjct: 493 ETERMEKSFVGGGEETNRILRKLGTAEIKSGVSLA--ELCRRPELNYESLRPLDPDRPEL 550 Query: 529 SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 S+ V E ++IE Y Y RQ+ + K E++ IP+D DY+ + L E ++KL +++ Sbjct: 551 SAEVREEVEIEIRYKGYIARQLQQVSHFKSMEEKRIPEDIDYAEVGNLRLEARQKLKLIR 610 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 P N+ AS+I G++PA +++LL+Y++K K Sbjct: 611 PDNVGMASRISGVSPADISVLLVYLEKRRRK 641 >gi|237724395|ref|ZP_04554876.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacteroides sp. D4] gi|229437264|gb|EEO47341.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacteroides dorei 5_1_36/D4] Length = 623 Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust. Identities = 259/622 (41%), Positives = 367/622 (59%), Gaps = 15/622 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAGCEAAA AA +G+ T LIT + IG MSCNPA+GG+ KG +VREIDAL Sbjct: 5 YDVIVIGAGHAGCEAAAAAANMGSKTCLITMDMNKIGQMSCNPAVGGIAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG V D IQFR+LN KGPA+ PR Q DR + A + + + NL + Q V Sbjct: 65 GGYMGLVTDRTAIQFRMLNRSKGPAMWSPRAQCDRGKFIWAWREILENTPNLHIWQDTVE 124 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + ++ +VLT GTFL G++HIG ++ GRM + S L S Sbjct: 125 ELIVENGEATGVMTCWGVTFHAKCIVLTAGTFLNGLMHIGHKQLAGGRMAEPASYHLTES 184 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + GR+KTGTP R+DG+++ ++ E Q + FSFM++ +Q++C T Sbjct: 185 ITRHGITAGRMKTGTPVRIDGRSVHYELMETQDGENDFHRFSFMSEPRKLKQLQCWTCFT 244 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N E H ++ + + S +++G I+S GPRYCPSIE KIV F ++ HQ+FLEPEG T + Sbjct: 245 NEEVHEVLRKGLPDSPLFNGQIQSIGPRYCPSIETKIVTFPDKPQHQLFLEPEGETTQEL 304 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG S++LP +IQ ++ +P + + + RPGYAIEYDY +P +L TLE+K I LFL Sbjct: 305 YLNGFSSSLPMDIQLAALKKVPAFKDLVVYRPGYAIEYDYFDPTQLKHTLESKIIKNLFL 364 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ+NGTTGYEEA QG++AGIN+ + + R ++YIGV+IDDL +KGV EPYR Sbjct: 365 AGQVNGTTGYEEAGGQGIIAGINAHINCHGGEPFTLGRDEAYIGVLIDDLVTKGVDEPYR 424 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAEYRI LR D+AD RLT KLG + + R + + N + K+ + + Sbjct: 425 MFTSRAEYRILLRQDDADMRLTERAYKLGLVKQDRYEHLCSKREAVNQIIDFAKTFSIKA 484 Query: 486 KNLSSTSISFKQDGKTRTAY-----EFLSYPDFSIQNLFSICPDARKF-------SSLVI 533 ++ S G R + + L+ P +I+N+ P + VI Sbjct: 485 ALINDALESL---GTARLTHGCKLIDLLNRPQITIENIAGHIPAFKAMLDQITDRKEEVI 541 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E ++ Y Y R+ + A++I E I FDY+SL +LS E ++KL + P L Sbjct: 542 EAAEVLIKYQGYIDRERMIAEKIHRLEAIRIKGKFDYNSLNSLSTEARQKLMKIDPETLA 601 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I G++P+ +N+LL+ + + Sbjct: 602 QASRIPGISPSDINVLLVLLGR 623 >gi|157363553|ref|YP_001470320.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Thermotoga lettingae TMO] gi|205831565|sp|A8F522|MNMG_THELT RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|157314157|gb|ABV33256.1| glucose inhibited division protein A [Thermotoga lettingae TMO] Length = 605 Score = 456 bits (1173), Expect = e-126, Method: Compositional matrix adjust. Identities = 264/611 (43%), Positives = 362/611 (59%), Gaps = 25/611 (4%) Query: 19 EAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGI 78 EAA A+LG TAL+T + CNPAIGG KG +VREIDAL G M +V D I Sbjct: 2 EAALATARLGFKTALLTSNLDRVAWAPCNPAIGGPAKGIIVREIDALGGEMAKVTDETMI 61 Query: 79 QFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIV 138 R+LN KG +VR R Q D+ Y M+R + +NL + +V EK + S+V Sbjct: 62 NVRMLNTSKGASVRALRAQIDKVSYSQKMKRILEETQNLYLRHSQVCDILVEKGKVKSVV 121 Query: 139 MQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKT 198 + ++LT GTFL G I IG AGR+GD PS L S K+ R KT Sbjct: 122 DTLGIEYKSRAIILTAGTFLNGKIFIGHATFEAGRLGDFPSKGLTESLEKYGIRFQRFKT 181 Query: 199 GTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK--ITNRQIECGITRTNLETHRIIMEN 256 GTPAR+ GK+I + K +Q + + FS+ DK I ++ C +T TN +TH II +N Sbjct: 182 GTPARILGKSIDFSKMIRQDTSKEPLCFSYF-DKPVILSKDYPCWLTYTNEKTHEIIRKN 240 Query: 257 IKHSAIYSGDIK---SYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTA 313 ++ S +Y GD+K GPRYCPSIEDK+V+F +N HQIF+EPEG T Y NG+ST+ Sbjct: 241 LRFSPLY-GDVKLIVGKGPRYCPSIEDKVVKFPSKNMHQIFVEPEGKTTGEYYLNGLSTS 299 Query: 314 LPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTT 373 LP E+Q + IRTIPGLE +I RP YAIEYDY +P +L+ TLE+K + GLFLAGQINGT+ Sbjct: 300 LPYEVQLEMIRTIPGLENAHITRPAYAIEYDYADPTQLYHTLESKIVEGLFLAGQINGTS 359 Query: 374 GYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEY 433 GYEEAA QGL+AGIN+A K + R+++YIGVMIDD+ +KGV EPYR+ TSRAE+ Sbjct: 360 GYEEAAGQGLIAGINAALKLRGENQFTLDRSEAYIGVMIDDIVTKGVDEPYRILTSRAEF 419 Query: 434 RISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLS---- 489 R+ LR DNA RL+ G ++G I + + +E L S +K+ + K +S Sbjct: 420 RLLLRHDNAHLRLSKKGYQIGLIPKW-------FYEEILTLESRIKTEIERLKQVSIKPT 472 Query: 490 ------STSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 TSI+ + T ++ L PD + + L S+ P S VIE++++ + Y Sbjct: 473 GQINDFLTSINTHPLRQPTTLFQILKRPDITYEQLRSLDPSPMD-SPEVIEQIELTAKYE 531 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y + + E K EK IP+ DY +P LS +EKL ++ N+LQ S++ G+TP Sbjct: 532 DYIEKMLEETKVFNDLEKITIPEAIDYGKIPNLSVVAREKLEKIRLRNVLQVSRVPGITP 591 Query: 604 AALNLLLIYIK 614 A + L+ Y+K Sbjct: 592 ADILALITYLK 602 >gi|156742847|ref|YP_001432976.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Roseiflexus castenholzii DSM 13941] gi|205375711|sp|A7NN26|MNMG_ROSCS RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|156234175|gb|ABU58958.1| glucose inhibited division protein A [Roseiflexus castenholzii DSM 13941] Length = 676 Score = 456 bits (1172), Expect = e-126, Method: Compositional matrix adjust. Identities = 255/656 (38%), Positives = 366/656 (55%), Gaps = 46/656 (7%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IV+G GHAGCEAA AA++G T L+T + MSCNP+IGG KGHLVREIDAL Sbjct: 9 YDLIVVGAGHAGCEAAHAAARMGCRTLLLTIDLDKLAHMSCNPSIGGPAKGHLVREIDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ---- 121 GLMGRV D IQ R+LN KGPAV+ PR QAD+ LY M+ + + NLD+ Q Sbjct: 69 GGLMGRVTDRTFIQIRLLNESKGPAVQAPRAQADKRLYAKVMKETLETTPNLDLRQAMIE 128 Query: 122 -----------GEVAGFNTEKNIIS---SIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKL 167 G A + + +++ + + +VLTTGTFLRG G+ Sbjct: 129 RILLPQPPGRNGSAAPADDPAGVQPGHYAVITHTRRVYQSRALVLTTGTFLRGRAITGEA 188 Query: 168 KIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKT------------- 214 AGR G++P+ +L F RLKTGTP R+D +TI + +T Sbjct: 189 IWGAGRAGEAPATALGEDLAALGFPLVRLKTGTPPRIDARTIDFSQTSVQQGSPTPLFFG 248 Query: 215 -----------EKQFADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIY 263 E F + Q+ C + T E H I+ N+ + ++ Sbjct: 249 HYYRVLGEIPPEPAFTGAPACAYPEPLRAAWRPQLPCYLVHTTPEFHEIVRRNLDRAPLF 308 Query: 264 SGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFI 323 SG I+ GPRYCPSIEDKIVRF ++ H +FLEPEG +T VY G +T+LPE++Q + Sbjct: 309 SGIIEGVGPRYCPSIEDKIVRFADKERHGLFLEPEGWSTHEVYVQGCNTSLPEDVQWAML 368 Query: 324 RTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGL 383 R+IP L +V ++R GYAIEYD + E+ + +++I GLF AGQINGTTGYEEAAAQGL Sbjct: 369 RSIPALRRVELMRAGYAIEYDALATGEIAADMSSRRIPGLFFAGQINGTTGYEEAAAQGL 428 Query: 384 VAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNAD 443 +AGIN+AR I R ++YIGV+IDDL +K + EPYRMFTSRAE+R+ LR DNAD Sbjct: 429 MAGINAARFIQGKPPIILRRDEAYIGVLIDDLITKEIREPYRMFTSRAEHRLLLRTDNAD 488 Query: 444 NRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL---TSKNLSSTSISFKQDGK 500 RLT + +LG + R + + +E L +L+ L + N + + Sbjct: 489 LRLTRLAGELGLVDRERVEAVERKREESERLLRVLRGQRLFPSAATNARLSDVGIAPLSS 548 Query: 501 TRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEE 560 +A + L P+ + L D + + E+++IE+ Y Y +Q E + ++ E Sbjct: 549 EMSAEDVLRRPEVRYEQLRQAL-DLPACDADIAEQVEIEAKYGGYLQKQQREVERLRRME 607 Query: 561 KRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKN 616 R IP DFD+++L L NE ++ L +P + QA+++ G+ PA + +L++ +++ Sbjct: 608 ARRIPPDFDFTALRGLRNEARQTLQRFRPATVGQAARLAGINPADVAILIVALERR 663 >gi|307298513|ref|ZP_07578316.1| glucose inhibited division protein A [Thermotogales bacterium mesG1.Ag.4.2] gi|306915678|gb|EFN46062.1| glucose inhibited division protein A [Thermotogales bacterium mesG1.Ag.4.2] Length = 628 Score = 456 bits (1172), Expect = e-126, Method: Compositional matrix adjust. Identities = 266/622 (42%), Positives = 367/622 (59%), Gaps = 21/622 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D+IVIG GHAG EAA A++G T ++ T+G CNPA+GG KG +VREID L Sbjct: 10 FDIIVIGAGHAGIEAAIAGARMGMKTLILNINLDTVGWTPCNPAMGGPAKGIVVREIDVL 69 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G + + D A + R+LN KG AVR R Q D+ Y M+R + QENL + G V Sbjct: 70 GGEIAKSTDQASLNIRILNTSKGAAVRALRAQVDKIRYSQTMKRSMEMQENLFIQSGIVK 129 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 TEK + ++ +V++ +GTFL G I IG + PAGR+G+ PS L S Sbjct: 130 AIETEKGSVKGVITNFGLRYSARSVIVASGTFLGGKIFIGPHEFPAGRLGEFPSTELTGS 189 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK-ITNRQIECGITR 244 F+ R KTGTPAR+ G++I + + E+Q E + FS ++ + C +TR Sbjct: 190 LRSIGFEVRRFKTGTPARIAGRSIDFAEMERQGTSETPLCFSHFSEPYVLEDDHPCWLTR 249 Query: 245 TNLETHRIIMENIKHSAIYSGDIK---SYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 TN ETH II ++ S +Y GD+K S GPRYCPSIEDK+++F ++ HQ+F+EPE Sbjct: 250 TNKETHDIIKRDLHFSPLY-GDLKLIDSRGPRYCPSIEDKVIKFSSKDSHQLFVEPESAY 308 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 ++ Y NG+ST+LP E Q + IRTIPGL + I+RP YAIEYDYINP +L+ TLE+K + Sbjct: 309 SNEYYLNGLSTSLPYETQLEMIRTIPGLGRAEIVRPAYAIEYDYINPTQLYSTLESKVVE 368 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 L+ AGQ+NGT+GYEEAA QGL+AGIN++ K + SR+++YIGVMIDDL +KGV Sbjct: 369 NLYFAGQVNGTSGYEEAAGQGLIAGINASAKLLGEKQLVLSRSEAYIGVMIDDLVTKGVD 428 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNF-LRSLLKS 480 EPYR+ TSRAEYR+ LR DNA RLT G + G + ++R +E L L K Sbjct: 429 EPYRLLTSRAEYRLLLRHDNAHIRLTEYGYRYGLVPAWFKERVDSLTREIKTQLIRLQKI 488 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLS--------YPDFSIQNLFSICPDARKFSSLV 532 V S+ L+ IS K K +F S Y D S+ + I D V Sbjct: 489 NVRPSEGLNELLIS-KGSSKIDLPVKFSSLLKRAGVGYRDISMFDPEPILDDD------V 541 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 I +++IE Y+ Y R E K ++ E+ LIP DY ++ LS E KEKL KP ++ Sbjct: 542 IGQVEIEVKYSGYIDRLKAEVKRLEEIEEDLIPSTMDYDAVSNLSTEAKEKLKKTKPASV 601 Query: 593 LQASKIEGMTPAALNLLLIYIK 614 QA +I G+TP+ + L ++K Sbjct: 602 GQAMRIPGLTPSDIMNLSFHLK 623 >gi|206895192|ref|YP_002247577.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Coprothermobacter proteolyticus DSM 5265] gi|206737809|gb|ACI16887.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Coprothermobacter proteolyticus DSM 5265] Length = 614 Score = 456 bits (1172), Expect = e-126, Method: Compositional matrix adjust. Identities = 265/614 (43%), Positives = 352/614 (57%), Gaps = 11/614 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+G GHAGCEAA +AAKLGA T LIT T+ + CNPAIGG GK LVREIDA Sbjct: 2 SYDVIVVGAGHAGCEAAHIAAKLGAKTLLITSFIDTVALLPCNPAIGGPGKSQLVREIDA 61 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLMGRV + + IQ RVLN KGPAV R Q D+ LY M + +NL+++Q V Sbjct: 62 LGGLMGRVTNRSYIQARVLNKSKGPAVWANRAQVDKYLYPSEMLNRLSQTKNLELMQAHV 121 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 G ++N + + +D I TV+LTTGTFL G I+I PAGR G+ P+ + Sbjct: 122 NGLLYDQNTVYGVKTEDGRHIEGKTVILTTGTFLEGRIYISSWSKPAGRWGEFPATGISE 181 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 K F GR TGT R+D KTI + K Q D L FSF + + R Sbjct: 182 DLKKLGFSMGRFNTGTTPRIDEKTIDYSKATIQENDPGL-SFSFWEEPNPPGYKPVYMVR 240 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN T ++ ENI +A + + GPRYCPSIE+K V F E+ H IFLEP GL T Sbjct: 241 TNARTMALVRENINLTASRASTMVRVGPRYCPSIEEKAVWFPEKTEHLIFLEPVGLGTSE 300 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNG++ +LP +IQ + +RTI GLE+V IIRPGY ++YD + P +L TLE K + LF Sbjct: 301 IYPNGLAISLPVDIQQKVLRTIEGLEEVEIIRPGYTVDYDMVWPMQLNITLEAKHVKNLF 360 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEAAAQG++AGIN+A K+ R + +IG +ID+LT+K + EPY Sbjct: 361 LAGQINGTTGYEEAAAQGIIAGINAALKALGEPPFTILRHEGFIGTLIDELTTKELAEPY 420 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSR+E+R+ R DNA RL G + Q ++K + + + L T Sbjct: 421 RMLTSRSEFRMIHRQDNAIWRLAEKAHSRGIL---TQAEYSKVQERKTKMDEVFNKLKET 477 Query: 485 SKNLSSTSISF-KQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 S +S T F KQ K T L P+ + ++ P+ S ++IE Y Sbjct: 478 S--VSPTYFPFLKQPVKAETV---LRRPEVHLGDMEQFIPEIAVLSDEEKLTVEIEVKYE 532 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y ++M IK E IP+DF Y LP +S E + L KP L QAS++ G+ Sbjct: 533 GYLQKEMSLLNSIKKLENLNIPQDFQYDGLP-ISREALDVLKKTKPSTLGQASRLAGVHM 591 Query: 604 AALNLLLIYIKKNT 617 + L ++L ++K + Sbjct: 592 SDLAVILSALRKGS 605 >gi|212692562|ref|ZP_03300690.1| hypothetical protein BACDOR_02059 [Bacteroides dorei DSM 17855] gi|265752647|ref|ZP_06088216.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides sp. 3_1_33FAA] gi|212664847|gb|EEB25419.1| hypothetical protein BACDOR_02059 [Bacteroides dorei DSM 17855] gi|263235833|gb|EEZ21328.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides sp. 3_1_33FAA] Length = 623 Score = 456 bits (1172), Expect = e-126, Method: Compositional matrix adjust. Identities = 259/622 (41%), Positives = 366/622 (58%), Gaps = 15/622 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAGCEAAA AA +G+ T LIT + IG MSCNPA+GG+ KG +VREIDAL Sbjct: 5 YDVIVIGAGHAGCEAAAAAANMGSKTCLITMDMNKIGQMSCNPAVGGIAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG V D IQFR+LN KGPA+ PR Q DR + A + + + NL + Q V Sbjct: 65 GGYMGLVTDRTAIQFRMLNRSKGPAMWSPRAQCDRGKFIWAWREILENTPNLHIWQDTVE 124 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + ++ +VLT GTFL G++HIG ++ GRM + S L S Sbjct: 125 ELIVENGEATGVMTCWGVTFHAKCIVLTAGTFLNGLMHIGHKQLAGGRMAEPASYHLTES 184 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 GR+KTGTP R+DG+++ ++ E Q + FSFM++ +Q++C T Sbjct: 185 ITHHGITAGRMKTGTPVRIDGRSVHYELMETQDGENDFHRFSFMSEPRKLKQLQCWTCFT 244 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N E H ++ + + S +++G I+S GPRYCPSIE KIV F ++ HQ+FLEPEG T + Sbjct: 245 NEEVHEVLRKGLPDSPLFNGQIQSIGPRYCPSIETKIVTFPDKPQHQLFLEPEGETTQEL 304 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG S++LP +IQ ++ +P + + + RPGYAIEYDY +P +L TLE+K I LFL Sbjct: 305 YLNGFSSSLPMDIQLAALKKVPAFKDLVVYRPGYAIEYDYFDPTQLKHTLESKIIKNLFL 364 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ+NGTTGYEEA QG++AGIN+ + + R ++YIGV+IDDL +KGV EPYR Sbjct: 365 AGQVNGTTGYEEAGGQGIIAGINAHINCHGGEPFTLGRDEAYIGVLIDDLVTKGVDEPYR 424 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAEYRI LR D+AD RLT KLG + + R + + N + K+ + + Sbjct: 425 MFTSRAEYRILLRQDDADMRLTERAYKLGLVKQDRYEHLCSKREAVNQIIDFAKTFSIKA 484 Query: 486 KNLSSTSISFKQDGKTRTAY-----EFLSYPDFSIQNLFSICPDARKF-------SSLVI 533 ++ S G R + + L+ P +I+N+ P + VI Sbjct: 485 ALINDALESL---GTARLTHGCKLIDLLNRPQITIENIAGHIPAFKAMLDQITDRKEEVI 541 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E ++ Y Y R+ + A++I E I FDY+SL +LS E ++KL + P L Sbjct: 542 EAAEVLIKYQGYIDRERMIAEKIHRLEAIRIKGKFDYNSLNSLSTEARQKLMKIDPETLA 601 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I G++P+ +N+LL+ + + Sbjct: 602 QASRIPGISPSDINVLLVLLGR 623 >gi|332866945|ref|ZP_08437271.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Acinetobacter baumannii 6013113] gi|332734326|gb|EGJ65453.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Acinetobacter baumannii 6013113] Length = 557 Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust. Identities = 243/555 (43%), Positives = 339/555 (61%), Gaps = 8/555 (1%) Query: 68 LMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGF 127 L+ R +D IQFR+LN +KG AVR R QADR Y+ A++ + +Q NLD+ Q Sbjct: 2 LLNRSSDL--IQFRILNSRKGAAVRATRAQADRVRYKAAIRETLENQANLDIFQQAADDL 59 Query: 128 NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFM 187 E + + +V Q TVVLTTGTFL GVIH+G K GR GD PS +L Sbjct: 60 IVEGDTVKGVVTQMGIRFDAKTVVLTTGTFLGGVIHVGLEKSSGGRAGDPPSIALAQRLR 119 Query: 188 KFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGITRTN 246 + GRLKTGTP R+D +++ + Q D SFM D + Q+ C IT TN Sbjct: 120 ELKLPVGRLKTGTPPRIDARSVDFSVMTPQPGDFPSPVMSFMGDVSMHPEQVNCYITHTN 179 Query: 247 LETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVY 306 +TH II + S +Y+G I+ GPRYCPSIEDKI RF +++ HQ+FLEPEGL+T +Y Sbjct: 180 EKTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFSDKDSHQVFLEPEGLDTHELY 239 Query: 307 PNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLA 366 PNGIST+LP ++Q + +R+I G+E +I+RPGYAIEYDY NP+ L TLETK I+GL+ A Sbjct: 240 PNGISTSLPFDVQFELVRSIRGMENAHILRPGYAIEYDYFNPQALKFTLETKAINGLYFA 299 Query: 367 GQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRM 426 GQINGTTGYEEA AQGL+AG+N+AR++ + + R +Y+GV++DDL + G EPYRM Sbjct: 300 GQINGTTGYEEAGAQGLLAGLNAARRAWEQEEWTPKRDQAYMGVLVDDLITLGTKEPYRM 359 Query: 427 FTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSK 486 FTSRAEYR+ LR DNAD RLT IG +LG + + R + + ++ S L+ + Sbjct: 360 FTSRAEYRLMLREDNADQRLTTIGRELGLVDDVRWAAYCEKMEAVERETSRLQHVWAAPN 419 Query: 487 NLSS---TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 N ++ K +A + L P+ + + + + S V E+++I Y Sbjct: 420 NPMGKKFVEMTGADLSKECSAIDLLKRPNINFGQIAELT--GSEVSQQVGEQIEIAVKYE 477 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y RQ + ++K E+ IP DFDY + LS E+ +KL ++P L QAS+I G+TP Sbjct: 478 GYINRQHEDVAQLKRLEETKIPADFDYDVVSGLSREITQKLKTVRPETLAQASRIPGVTP 537 Query: 604 AALNLLLIYIKKNTV 618 AA+ L++I I+KN + Sbjct: 538 AAVQLVMITIRKNNM 552 >gi|254880986|ref|ZP_05253696.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides sp. 4_3_47FAA] gi|254833779|gb|EET14088.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides sp. 4_3_47FAA] Length = 662 Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust. Identities = 262/625 (41%), Positives = 368/625 (58%), Gaps = 21/625 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAGCEAAA AA +G+ T LIT + IG MSCNPA+GG+ KG +VREIDAL Sbjct: 44 YDVIVIGAGHAGCEAAAAAANMGSKTCLITMDMNKIGQMSCNPAVGGIAKGQIVREIDAL 103 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG V D IQFR+LN KGPA+ PR Q DR + A + + + NL + Q V Sbjct: 104 GGYMGLVTDRTAIQFRMLNRSKGPAMWSPRAQCDRGKFIWAWREILENTPNLHIWQDTVE 163 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + ++ +VLT GTFL G++HIG ++ GRM + S L S Sbjct: 164 ELIVENGEATGVMTCWGVTFHAKCIVLTAGTFLNGLMHIGHKQLAGGRMAEPASYHLTES 223 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + GR+KTGTP R+DG+++ +D E Q + FSFM++ +Q++C T Sbjct: 224 ITRQGITAGRMKTGTPVRIDGRSVHYDLMETQDGENDFHRFSFMSEPRKLKQLQCWTCFT 283 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N E H I+ + + S +++G I+S GPRYCPSIE KIV F ++ HQ+FLEPEG T + Sbjct: 284 NEEVHEILRKGLPDSPLFNGQIQSIGPRYCPSIETKIVTFPDKPQHQLFLEPEGETTQEL 343 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG S++LP +IQ ++ +P + + + RPGYAIEYDY +P +L TLE+K I LFL Sbjct: 344 YLNGFSSSLPMDIQLAALKKVPAFKDLVVYRPGYAIEYDYFDPTQLKHTLESKIIKNLFL 403 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ+NGTTGYEEA QG++AGIN+ + + R ++YIGV+IDDL +KGV EPYR Sbjct: 404 AGQVNGTTGYEEAGGQGIIAGINAHINCHGGEPFTLGRDEAYIGVLIDDLVTKGVDEPYR 463 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAEYRI LR D+AD RLT KLG + + R + + + + K+ + + Sbjct: 464 MFTSRAEYRILLRQDDADMRLTERAYKLGLVKQDRYEHLCSKREAVSRIIDFAKTFSIKA 523 Query: 486 KNLSSTSISFKQDGKTRTAY-----EFLSYPDFSIQNLFSICPDARKFSSL--------- 531 ++ S G R + + L+ P +I+N+ P F +L Sbjct: 524 ALINDALESL---GTARLTHGCKLIDLLNRPQITIENIAGHIP---AFKALLDQITDRKE 577 Query: 532 -VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 VIE ++ Y Y R+ + A +I E I FDY+SL +LS E ++KL + P Sbjct: 578 EVIEAAEVLIKYQGYIDRERMIADKIHRLEAIRIKGKFDYNSLNSLSTEARQKLMKIDPE 637 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 L QAS+I G++P+ +N+LL+ + + Sbjct: 638 TLAQASRIPGISPSDINVLLVLLGR 662 >gi|224023518|ref|ZP_03641884.1| hypothetical protein BACCOPRO_00220 [Bacteroides coprophilus DSM 18228] gi|224016740|gb|EEF74752.1| hypothetical protein BACCOPRO_00220 [Bacteroides coprophilus DSM 18228] Length = 623 Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust. Identities = 267/630 (42%), Positives = 365/630 (57%), Gaps = 23/630 (3%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +N +YDVIVIG GHAGCEAAA AA LG+ T LIT + IG MSCNPA+GG+ KG +VRE Sbjct: 1 MNFNYDVIVIGAGHAGCEAAAAAANLGSKTCLITMDMNKIGQMSCNPAVGGIAKGQIVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ-ENLDVI 120 IDAL G MG V D IQFR+LN KGPA+ PR Q DR + A REIL NL + Sbjct: 61 IDALGGYMGLVTDRTAIQFRMLNRSKGPAMWSPRAQCDRGKFIWAW-REILENIPNLHIW 119 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E ++ +V VVLT GTFL G++HIG+ + GR + S Sbjct: 120 QDTVEELLVENGEVTGVVTCWGVTFHAKCVVLTAGTFLNGLMHIGRKMLAGGRCAEPASY 179 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 L S + GR+KTGTP R+D +++ +D E Q + FS++++ +Q++C Sbjct: 180 HLTESITRHGITAGRMKTGTPVRIDARSVHFDLMETQDGENDFHRFSYISEPRKLKQLQC 239 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 TN E H + + S +Y+G I+S GPRYCPSIE KIV F ++ HQ+FLEPEG Sbjct: 240 WTCYTNEEVHDTLRSGLADSPLYNGQIQSIGPRYCPSIETKIVTFPDKPQHQLFLEPEGE 299 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T +Y NG S++LP EIQ + ++ IP + + RPGYAIEYDY +P +L TLE+K + Sbjct: 300 TTRELYLNGFSSSLPMEIQLEALKKIPCFRDLVVYRPGYAIEYDYFDPTQLKHTLESKIV 359 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 LF AGQ+NGTTGYEEA QG++AGIN+ + R ++YIGV+IDDL +KGV Sbjct: 360 KNLFFAGQVNGTTGYEEAGGQGIIAGINAHINCQGGEPFVLGRDEAYIGVLIDDLVTKGV 419 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYRI LR D+AD RLT +LG + + R + +E + K+ Sbjct: 420 DEPYRMFTSRAEYRILLRQDDADMRLTERAYRLGLVKQDRYDKLCSKREEIERIVEFAKT 479 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAY-----EFLSYPDFSIQNLFSICPDARKFSSL---- 531 + + ++ S G R + + +S P +I N I P F +L Sbjct: 480 YSIKADKINDALESL---GTARLTHGCKLIDIISRPQITIDN---IAPHVPAFQALLDRI 533 Query: 532 ------VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 +IE +I Y Y R+ A +I E I FDY+SL +LS E ++KL Sbjct: 534 EDRKEEIIEAAEIRIKYKGYIDRERTIADKIHRLESIRIKGKFDYASLQSLSTEARQKLV 593 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 + P L QAS+I G++P+ +N+LL+ + + Sbjct: 594 KIDPETLAQASRIPGVSPSDVNVLLVLLGR 623 >gi|312878756|ref|ZP_07738556.1| glucose inhibited division protein A [Aminomonas paucivorans DSM 12260] gi|310782047|gb|EFQ22445.1| glucose inhibited division protein A [Aminomonas paucivorans DSM 12260] Length = 627 Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust. Identities = 250/612 (40%), Positives = 351/612 (57%), Gaps = 4/612 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+V+GGGH GCEAA +A++GA T L+ M+CNP++GG KGHL+RE+DAL Sbjct: 8 YDVVVVGGGHGGCEAALASARMGARTLLLNLHLENAALMACNPSMGGPAKGHLIREVDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G RV D +Q R LN KGPAVR R Q D Y LA + + + +NL+V QGEV Sbjct: 68 GGFQARVTDRTTLQLRWLNTSKGPAVRTLRAQCDLVQYHLAFRMLLETTQNLEVHQGEVT 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E+ I + I VVL GT+L GV HIG + +G +G+ P++ L +S Sbjct: 128 DLWVEQGRIRGVRTALGDPIEARRVVLAAGTYLAGVAHIGLHRFASGPLGELPASRLSDS 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + F RLKTGT RL T+ W Q +D FS + K T + C RT Sbjct: 188 LRREGFRVERLKTGTTPRLHADTVDWASLPLQESDPEPGAFSHFSPKRTYQGYPCAQIRT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N TH +I ++ S +++G I+ GPRYCPSIEDK+VRF ER+ H +FLEP + Sbjct: 248 NRRTHDLIRAHLDRSPLFTGVIQGVGPRYCPSIEDKVVRFPERDSHPVFLEPLSATNREI 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y +ST+LP ++Q +RT+PG E+ +++PGYAIEYDY+ P +L P LETK + GLF Sbjct: 308 YVQNLSTSLPYDVQVALVRTLPGCERAKVLKPGYAIEYDYLPPTQLEPWLETKGVKGLFC 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ NGT+GYEEAA+QGL+AGIN+ R D + R ++Y+GV++DDL +KG EPYR Sbjct: 368 AGQTNGTSGYEEAASQGLLAGINAVRTLRGEDPVVLGRHEAYLGVLVDDLVTKGTQEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL-VLT 484 M TSR E+R+ LR DNAD RL P+G +LG + +R + + + L L++L V Sbjct: 428 MLTSRCEHRLLLRHDNADRRLAPLGRRLGLLEDRDWALLTERWRRQDDLEERLQALRVAP 487 Query: 485 SKNLSSTSISFKQDGKTR--TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSY 542 + + S S+ TA E L P + L +C E + +E+ Y Sbjct: 488 TDRVRSLLASWDTPAPEEPLTAKELLRRPQITWDRLAELC-GLEGEDREAGEYVAVETKY 546 Query: 543 AAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMT 602 Y RQ + ++ ++ +P+ FD+ S+P L E KL ++P L QA +I G+T Sbjct: 547 QGYVERQERQVARMRRFDEVPLPEGFDFRSVPGLLTESLTKLERVRPRTLGQAGRISGVT 606 Query: 603 PAALNLLLIYIK 614 PA L LL ++ Sbjct: 607 PADLQLLWATLE 618 >gi|289450689|ref|YP_003475558.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289185236|gb|ADC91661.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 658 Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust. Identities = 254/634 (40%), Positives = 370/634 (58%), Gaps = 25/634 (3%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 ++ + DV VIG GHAGCEAA AAKLG T L + + ++ CNP+IGG KG LVRE Sbjct: 14 LSDTIDVAVIGAGHAGCEAAVAAAKLGCRTVLFSLTLDAVANLPCNPSIGGTAKGQLVRE 73 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G+MG++AD IQ+R+LN KGPAV+ PR Q DR LY+ M+ + + NL + Q Sbjct: 74 IDALGGVMGKIADKCAIQYRMLNSSKGPAVQSPRAQIDRRLYQETMKSYLETVPNLHLFQ 133 Query: 122 GEVAGF--NTEKNI--------ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPA 171 EV TE I +S +V ++ ++ C V++ TGT+L G + IG+ + Sbjct: 134 AEVVNILIETENEIESDLKLGKVSGVVTRNGAIFTCKKVIIATGTYLAGKVFIGEHNYAS 193 Query: 172 GRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD 231 G P+ L + R KTGTP R++ ++ + + E Q D+ L FSF + Sbjct: 194 GPDNSQPAAELAINLRNLGLPLRRFKTGTPVRVNKYSVDFKQMESQTPDKDLWRFSFDYE 253 Query: 232 KITNR----QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGE 287 + Q C +T T +T II EN+ S +YSG I+ GPRYCPSIEDKIVRF + Sbjct: 254 NSPQKDLLPQQNCWLTWTTGDTAEIIRENLYRSPLYSGQIEGIGPRYCPSIEDKIVRFPD 313 Query: 288 RNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN 347 + HQIF+EP G T +Y G+S++LPE++Q + + ++PGL + I R YAIEYD + Sbjct: 314 KLRHQIFIEPMGQTTAEMYLQGLSSSLPEDVQLKIVHSLPGLAEAVIQRSAYAIEYDCLP 373 Query: 348 PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSY 407 P L L+T+ I+GL+ AGQ NGT+GYEEAAAQGLVAGIN+AR + + SR +Y Sbjct: 374 PTCLKNDLQTRLIAGLYGAGQFNGTSGYEEAAAQGLVAGINAARACHLQQPLVLSRDQAY 433 Query: 408 IGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF--- 464 IGV+IDDL +KG EPYRM TSRAEYR+ LR DNAD RL +G LG + R R+ Sbjct: 434 IGVLIDDLVTKGTNEPYRMMTSRAEYRLLLRQDNADERLIELGYNLGLNSQERLDRYMNK 493 Query: 465 ----AKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS 520 AK I+ N ++ + + L+ + Q G T + L P+ S + L Sbjct: 494 AAAIAKEIKRLNEVK--VTGTAAINDYLAEQGVPALQGGTTLA--QLLLRPNMSYEKLAP 549 Query: 521 ICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNEL 580 I + ++ + +I Y Y + ++ + E++L+P + DY+ + L E Sbjct: 550 IDQTRPELPQVIKDGAEIRIKYQGYIALEEKRIEKFRKMERKLLPPEIDYNDIGGLRIEA 609 Query: 581 KEKLSILKPFNLLQASKIEGMTPAALNLLLIYIK 614 K+KLS +P ++ QA++I G++PA +++LL+Y++ Sbjct: 610 KQKLSQFRPMSIGQAARISGVSPADISVLLVYLE 643 >gi|237709122|ref|ZP_04539603.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides sp. 9_1_42FAA] gi|229456818|gb|EEO62539.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides sp. 9_1_42FAA] Length = 623 Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust. Identities = 258/622 (41%), Positives = 366/622 (58%), Gaps = 15/622 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAGCEAAA AA +G+ T LIT + IG MSCNPA+GG+ KG +VREIDAL Sbjct: 5 YDVIVIGAGHAGCEAAAAAANMGSKTCLITMDMNKIGQMSCNPAVGGIAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG V D IQFR+LN KGPA+ PR Q DR + A + + + NL + Q V Sbjct: 65 GGYMGLVTDRTAIQFRMLNRSKGPAMWSPRAQCDRGKFIWAWREILENTPNLHIWQDTVE 124 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + ++ +VLT GTFL G++HIG ++ GRM + S L S Sbjct: 125 ELIVENGEATGVMTCWGVTFHAKCIVLTAGTFLNGLMHIGHKQLAGGRMAEPASYHLTES 184 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + GR+KTGTP R+DG+++ ++ E Q + FSFM++ +Q++C T Sbjct: 185 ITRHGITAGRMKTGTPVRIDGRSVHYELMETQDGENDFHRFSFMSEPRKLKQLQCWTCFT 244 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N E H ++ + + S +++G I+S GPRYCPSIE KIV F ++ HQ+FLEPEG T + Sbjct: 245 NEEVHEVLRKGLPDSPLFNGQIQSIGPRYCPSIETKIVTFPDKPQHQLFLEPEGETTQEL 304 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG S++LP +IQ ++ +P + + + RPGYAIEYDY +P +L TLE+K I LFL Sbjct: 305 YLNGFSSSLPMDIQLAALKKVPAFKDLVVYRPGYAIEYDYFDPTQLKHTLESKIIKNLFL 364 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ+NGTTGYEEA QG++AGIN+ + + R ++YIGV+IDDL +KGV EPYR Sbjct: 365 AGQVNGTTGYEEAGGQGIIAGINAHINCHGGEPFTLGRDEAYIGVLIDDLVTKGVDEPYR 424 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAEYRI LR D+ D RLT KLG + + R + + N + K+ + + Sbjct: 425 MFTSRAEYRILLRQDDVDMRLTERAYKLGLVKQDRYEHLCSKREAVNQIIDFAKTFSIKA 484 Query: 486 KNLSSTSISFKQDGKTRTAY-----EFLSYPDFSIQNLFSICPDARKF-------SSLVI 533 ++ S G R + + L+ P +I+N+ P + VI Sbjct: 485 ALINDALESL---GTARLTHGCKLIDLLNRPQITIENIAGHIPAFKAMLDQITDRKEEVI 541 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E ++ Y Y R+ + A++I E I FDY+SL +LS E ++KL + P L Sbjct: 542 EAAEVLIKYQGYIDRERMIAEKIHRLEAIRIKGKFDYNSLNSLSTEARQKLMKIDPETLA 601 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I G++P+ +N+LL+ + + Sbjct: 602 QASRIPGISPSDINVLLVLLGR 623 >gi|319639994|ref|ZP_07994721.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacteroides sp. 3_1_40A] gi|317388272|gb|EFV69124.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacteroides sp. 3_1_40A] Length = 623 Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust. Identities = 260/622 (41%), Positives = 366/622 (58%), Gaps = 15/622 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAGCEAAA AA +G+ T LIT + IG MSCNPA+GG+ KG +VREIDAL Sbjct: 5 YDVIVIGAGHAGCEAAAAAANMGSKTCLITMDMNKIGQMSCNPAVGGIAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG V D IQFR+LN KGPA+ PR Q DR + A + + + NL + Q V Sbjct: 65 GGYMGLVTDRTAIQFRMLNRSKGPAMWSPRAQCDRGKFIWAWREILENTPNLHIWQDTVE 124 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + ++ +VLT GTFL G++HIG ++ GRM + S L S Sbjct: 125 ELIVENGEATGVMTCWGVTFHAKCIVLTAGTFLNGLMHIGHKQLAGGRMAEPASYHLTES 184 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + GR+KTGTP R+DG+++ +D E Q + FSFM++ +Q++C T Sbjct: 185 ITRQGITAGRMKTGTPVRIDGRSVHYDLMETQDGENDFHRFSFMSEPRKLKQLQCWTCFT 244 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N E H I+ + + S +++G I+S GPRYCPSIE KIV F ++ HQ+FLEPEG T + Sbjct: 245 NEEVHEILRKGLPDSPLFNGQIQSIGPRYCPSIETKIVTFPDKPQHQLFLEPEGETTQEL 304 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG S++LP +IQ ++ +P + + + RPGYAIEYDY +P +L TLE+K I LFL Sbjct: 305 YLNGFSSSLPMDIQLAALKKVPAFKDLVVYRPGYAIEYDYFDPTQLKHTLESKIIKNLFL 364 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ+NGTTGYEEA QG++AGIN+ + + R ++YIGV+IDDL +KGV EPYR Sbjct: 365 AGQVNGTTGYEEAGGQGIIAGINAHINCHGGEPFTLGRDEAYIGVLIDDLVTKGVDEPYR 424 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAEYRI LR D+AD RLT KLG + + R + + + + K+ + + Sbjct: 425 MFTSRAEYRILLRQDDADMRLTERAYKLGLVKQDRYEHLCSKREAVSRIIDFAKTFSIKA 484 Query: 486 KNLSSTSISFKQDGKTRTAY-----EFLSYPDFSIQNLFSICPDARKF-------SSLVI 533 ++ S G R + + L+ P +I+N+ P + VI Sbjct: 485 ALINDALESL---GTARLTHGCKLIDLLNRPQITIENIAGHIPAFKALLDQITDRKEEVI 541 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E ++ Y Y R+ + A +I E I FDY+SL +LS E ++KL + P L Sbjct: 542 EAAEVLIKYQGYIDRERMIADKIHRLEAIRIKGKFDYNSLNSLSTEARQKLMKIDPETLA 601 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I G++P+ +N+LL+ + + Sbjct: 602 QASRIPGISPSDINVLLVLLGR 623 >gi|312377446|gb|EFR24275.1| hypothetical protein AND_11231 [Anopheles darlingi] Length = 556 Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust. Identities = 246/560 (43%), Positives = 362/560 (64%), Gaps = 22/560 (3%) Query: 27 LGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVK 86 +GA T L+THK STIG MSCNP+ GG+GKGHL+RE+DALDG+ GR D +G+Q++VLN + Sbjct: 1 MGARTLLVTHKRSTIGEMSCNPSFGGIGKGHLLREVDALDGVCGRCCDRSGVQYKVLNRR 60 Query: 87 KGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKN----IISSIVMQDN 142 KGPAV GPR Q DR LY+ +Q+E+ NL +I+ V + + +++ + + + Sbjct: 61 KGPAVWGPRAQIDRVLYKREVQQELARTPNLTIIEASVEDIDHVHDDHGAVLTGVKLANG 120 Query: 143 SMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPA 202 + +++V+TTGTFLRG I+IG PAGR+GD P+ L S + F GRLKTGTP Sbjct: 121 QTVTTTSLVITTGTFLRGQINIGLDTRPAGRIGDEPAIGLAKSIEQLGFRLGRLKTGTPP 180 Query: 203 RLDGKTIIWDKTEKQFADERLIPFSFMTDKI---TNRQIECGITRTNLETHRIIMENIKH 259 R+ +I ++ + D+ +PFSF+ D++ ++Q++C +T+T + I+ N+ Sbjct: 181 RIHRDSIRFEVLARNPGDDPPVPFSFLNDRVWLDADQQLDCFLTQTTPAVNEIVKRNLHC 240 Query: 260 SAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQ 319 + + ++ GPRYCPSIE K++RFG + HQI+LEPEG ++D++YPNG+S LPEE Q Sbjct: 241 NRHVTEELT--GPRYCPSIESKVLRFGHKL-HQIWLEPEGFDSDLIYPNGLSCTLPEEEQ 297 Query: 320 HQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAA 379 Q +R + GLEK ++RPGY +EYD+++P+EL+PTLETK++ GLFLAGQINGTTGYEEAA Sbjct: 298 VQLVRCLFGLEKAEVVRPGYGVEYDFVDPRELYPTLETKRVRGLFLAGQINGTTGYEEAA 357 Query: 380 AQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRP 439 AQGL+AG N+A K+ + SRT++Y+GV++DDLT+ G EPYRMFTSRAE+R+SLRP Sbjct: 358 AQGLLAGANAAAKALSKPPLTISRTEAYLGVLVDDLTTLGTNEPYRMFTSRAEFRLSLRP 417 Query: 440 DNADNRLTPIGMKLGCIGERRQKRF----AKYIQEYNFLRSLLKSLVLTSKNLSSTSISF 495 DNAD RLT G +G + E R +R + + LR + K +++ ++ + Sbjct: 418 DNADLRLTEKGYAIGLVSEERYRRTISIRERIAKAMEVLREIRKG---SNQWKAAMDLPA 474 Query: 496 KQDGKTRTAYEFL--SYPDFSIQNLFSICPDARKF---SSLVIERLQIESSYAAYTGRQM 550 + ++A+E L S D + + L + PD + + RL+IE+ YA Q Sbjct: 475 AKASIFKSAFEMLAISTDDITTERLCATEPDTFGWIRDDPELCRRLKIEALYALSIADQS 534 Query: 551 IEAKEIKFEEKRLIPKDFDY 570 E E++ E IP DY Sbjct: 535 REVDEVQRNEALRIPDTIDY 554 >gi|212550623|ref|YP_002308940.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212548861|dbj|BAG83529.1| glucose inhibited division protein A [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 624 Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust. Identities = 262/622 (42%), Positives = 362/622 (58%), Gaps = 14/622 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAGCEAA+ AA LG+ T LIT + I MSCNPA+GG+ KG ++REIDAL Sbjct: 5 YDVIVIGAGHAGCEAASAAANLGSKTLLITMDMNRIAQMSCNPAVGGIAKGQIIREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREIL-SQENLDVIQGEV 124 G MG +AD IQFR+LN KGPA+ PRTQ DR + + RE+L S NL + Q V Sbjct: 65 GGQMGLIADQTSIQFRMLNRSKGPAMWSPRTQNDRVEF-VKKWREVLDSIPNLFIWQDTV 123 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 I + + + +VL GTFL G+++IGK KI GRM + S + Sbjct: 124 TSLIIRNGIAIGVKTILDVEFQARAIVLAVGTFLNGLLYIGKSKISGGRMSEPASFGITE 183 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN--RQIECGI 242 ++ F R+KTGTP R+DG++I + E+Q + FS++ D I +Q+ C Sbjct: 184 QLVELGFKKSRMKTGTPVRIDGRSIDFSLMEEQKGEVDFHKFSYL-DFIRRPMKQLSCWT 242 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 + TN H ++ + + S +Y+G IK GPRYCPSIE KIV F + H +FLEPEG+NT Sbjct: 243 SHTNKACHGVLQDGLSESPLYNGKIKGIGPRYCPSIETKIVTFSYKEQHPLFLEPEGINT 302 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 Y NG S++LP IQ ++ IP I RPGYAIEYD+ +P +L +LETK I Sbjct: 303 QEYYLNGFSSSLPIFIQLLALKKIPAFRNARIYRPGYAIEYDFFHPTQLNHSLETKLIKN 362 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEA AQGL+AGIN+ + +R ++YIGV+IDDL +KGV E Sbjct: 363 LFFAGQINGTTGYEEAGAQGLIAGINAHINVHNEKSFILARNEAYIGVLIDDLVTKGVDE 422 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYRI LR DNAD RLT ++G + R + + + + ++ Sbjct: 423 PYRMFTSRAEYRILLRQDNADVRLTEKSYQIGLADKSRYNALVEKKKRIDNIIDFIRLYS 482 Query: 483 LTSKNLSST--SISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDAR----KFSSL---VI 533 + K ++S +I + L P +I + + P R K S +I Sbjct: 483 VDPKQVNSALEAIGTSPLRNKVKLTDLLLRPQLTINIISFLIPIVREQIDKISDCKEEII 542 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E ++I Y Y R+ I A++I E I DYS++ +LS E K+KL + P + Sbjct: 543 EAVEILIKYEGYIAREKIVAEKINRLENIKIRGRIDYSTVQSLSTEAKQKLISIDPETIA 602 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I G++P +N+LL+ +++ Sbjct: 603 QASRIPGVSPNDINVLLVLLRR 624 >gi|149919588|ref|ZP_01908067.1| glucose inhibited division protein A [Plesiocystis pacifica SIR-1] gi|149819531|gb|EDM78959.1| glucose inhibited division protein A [Plesiocystis pacifica SIR-1] Length = 579 Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust. Identities = 249/613 (40%), Positives = 337/613 (54%), Gaps = 50/613 (8%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDG 67 +IV+G GHAG EAA A+LG + ++T TIG CNP+IGG+ KGHLV EI AL G Sbjct: 1 MIVVGAGHAGLEAAFAGARLGVAVTVVTGSVGTIGQTPCNPSIGGVAKGHLVHEIHALGG 60 Query: 68 LMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGF 127 MG+ ADA I R LN+ KGPAV R Q D+ Y Q IL + V +G V Sbjct: 61 FMGKAADACAIHGRKLNLSKGPAVHSTRLQVDKLRYGAFAQAAILDHPGVVVREGLVVAV 120 Query: 128 NT-EKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSF 186 + ++ + + D + VV+TTGTFL GV+H G K P GR+G++P+ L Sbjct: 121 EVGDDGAVTGVRLADGERVAGQAVVVTTGTFLGGVLHTGSTKTPGGRVGEAPATELSTQL 180 Query: 187 MKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQI---ECGIT 243 F RLKTGTP RLD TI W E Q +D+ F + ++ C IT Sbjct: 181 ATLGFRLVRLKTGTPPRLDRTTIDWGALEAQGSDDPFPRFCAPDEPDAPPRLPEAHCYIT 240 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN E H +I E + S +YSG I+ GPRYCPSIEDK+VRF +R HQIFLEPEGL D Sbjct: 241 HTNAEVHALIRERLYESPMYSGQIEGVGPRYCPSIEDKVVRFADRERHQIFLEPEGLQPD 300 Query: 304 -VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 ++YPNGIST+LP E+Q + +R I GLE I+RPGYA+EYD ++ + L L + I G Sbjct: 301 ALIYPNGISTSLPAEVQVEMVRGIAGLEAARIVRPGYAVEYDAVDARALNHALASDAIPG 360 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L AGQINGT+GYEEA QGL+AG N+A + + + R +Y GV++DDL + G E Sbjct: 361 LAFAGQINGTSGYEEAGIQGLLAGANAALRLLGREPLELGRDQAYGGVLVDDLVTVGCDE 420 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RL I G I R +R + ++ Sbjct: 421 PYRMFTSRAEYRLLLREDNADERLAGIAHAHGLIPTARWERILRRLER------------ 468 Query: 483 LTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSY 542 ++ DG+ E + ++ + + +Y Sbjct: 469 ----------VAACVDGRANEEGE----------------------EAWIVAKARARKTY 496 Query: 543 AAYTGRQMIEAKEIKFEEKRL-IPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 A Y RQ E I+ E L +P D DY ++ L+ E E+L+ ++P + QA++I GM Sbjct: 497 AGYLERQRREVARIRGETGNLPLPADLDYFAIEGLTRESAERLARVQPSSTAQAARIPGM 556 Query: 602 TPAALNLLLIYIK 614 TPAAL+ + + + Sbjct: 557 TPAALSCVWAHAR 569 >gi|162606514|ref|XP_001713287.1| glucose inhibited division protein A [Guillardia theta] gi|12580753|emb|CAC27071.1| glucose inhibited division protein A [Guillardia theta] Length = 649 Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust. Identities = 256/625 (40%), Positives = 375/625 (60%), Gaps = 17/625 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+GGGH+GCEAA ++K G T LIT I CNP+IGG K +LV E+DA Sbjct: 31 SYDVIVVGGGHSGCEAAVASSKSGCKTLLITLNLDKIAWQPCNPSIGGPAKSNLVHEVDA 90 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 + G++G++ D + ++LN+ KGPAV R Q D+ Y M++ I S+ENL + +G V Sbjct: 91 IGGIIGKITDRTYLHKKLLNISKGPAVWALRAQTDKREYSEEMKKFIDSEENLSIQEGMV 150 Query: 125 AG--FNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 + K II I RC +VVLTTGTFL G I +G K+ AGR G+ S L Sbjct: 151 TQIFLDNNKKIIG-IGTHFGGFYRCRSVVLTTGTFLGGTIWVGPKKLSAGRSGEMASIGL 209 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECG 241 + +K + GRLKTGTP R+D +TI + K E Q +D+ + FSF T + +R+ + C Sbjct: 210 TENLIKSNIKFGRLKTGTPPRIDSRTIDYSKLEIQLSDQNELWFSFDTREWNSRETLPCY 269 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T+T +ET II +N+ S Y G ++S GPRYCPSIEDKIVRF ++ HQIFLEPEG N Sbjct: 270 LTKTTIETKNIIKQNLHLSPKYGGFMRSTGPRYCPSIEDKIVRFSNKDEHQIFLEPEGRN 329 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 + +Y G ST PE +Q IRTI GL I+RP Y+++YD++ +L TL + I Sbjct: 330 INEIYLQGFSTGFPENLQENLIRTIEGLHSCRILRPAYSVDYDFLPATQLEKTLMS-SIE 388 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQ+ GTTGYEEA+AQG+V G+N++ + K + SR S+IG MIDDL ++ + Sbjct: 389 GLFFAGQVCGTTGYEEASAQGIVTGLNASLYAQKKSLLTISRQGSFIGTMIDDLVTRSLN 448 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSR+EYR+ LR DNAD RL P+G K G + + F K +++ +L + Sbjct: 449 EPYRVLTSRSEYRMLLRGDNADIRLKPLGRKYGLVDDISWINFKKKVRDIKNKSLILNNT 508 Query: 482 VL-TSKNLSST-----SISFKQDGKTRTAYEFLSYPDFSIQNLFSI-CPDARKFSSLVIE 534 ++ + N+S ++ K+D + +S P+ S +L +I +++ L I Sbjct: 509 IIKINSNISGIIENELNVILKKD---LSLASMISRPNVSFDSLINIGIINSKNIEKLRI- 564 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 L+ E Y Y RQ + ++ I K+F++ + +S E +EKLS ++P L + Sbjct: 565 -LETEIKYQNYITRQNNQILSLERSLDLKIDKNFNFMDVNQISKEGREKLSKIRPKTLRE 623 Query: 595 ASKIEGMTPAALNLLLIYIKKNTVK 619 A+ I G++ + L++LLI ++K K Sbjct: 624 ATCIGGISSSDLHILLIIVEKYKFK 648 >gi|29348677|ref|NP_812180.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides thetaiotaomicron VPI-5482] gi|298387045|ref|ZP_06996599.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides sp. 1_1_14] gi|81170521|sp|Q8A2N7|MNMG_BACTN RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|29340582|gb|AAO78374.1| glucose-inhibited division protein A [Bacteroides thetaiotaomicron VPI-5482] gi|298260195|gb|EFI03065.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides sp. 1_1_14] Length = 628 Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust. Identities = 263/623 (42%), Positives = 369/623 (59%), Gaps = 20/623 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAGCEAAA AA LG+ T LIT + IG MSCNPA+GG+ KG +VREIDAL Sbjct: 5 YDVIVIGAGHAGCEAAAAAANLGSKTCLITMDMNKIGQMSCNPAVGGIAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG V D IQFR+LN KGPA+ PR Q DR + + + ++ + NL + Q V Sbjct: 65 GGQMGLVTDETAIQFRILNRSKGPAMWSPRAQCDRAKFIWSWREKLENTPNLHIWQDTVC 124 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + +V + +VLT GTFL G++H+G+ ++P GRM + S L S Sbjct: 125 ELLVENGEVVGLVTLWGVTFKAKCIVLTAGTFLNGLMHVGRHQLPGGRMAEPASYQLTES 184 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GR+KTGTP R+D ++I +D + Q + FSFM + +Q++C Sbjct: 185 IARHGIAYGRMKTGTPVRIDARSIHFDLMDTQDGECDFHKFSFMNTSTRHLKQLQCWTCY 244 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN E HRI+ E + S +++G I+S GPRYCPSIE KIV F ++ HQ+FLEPEG T Sbjct: 245 TNEEVHRILREGLPDSPLFNGQIQSIGPRYCPSIETKIVTFPDKEQHQLFLEPEGETTQE 304 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y NG S++LP +IQ ++ +P + + I RPGYAIEYDY +P +L +LE+K I LF Sbjct: 305 LYLNGFSSSLPMDIQIAALKKVPAFKDIVIYRPGYAIEYDYFDPTQLKHSLESKIIKNLF 364 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ+NGTTGYEEA QGL+AGIN+ + + +R ++YIGV+IDDL +KGV EPY Sbjct: 365 FAGQVNGTTGYEEAGGQGLIAGINAHINCHGGEAFTLARDEAYIGVLIDDLVTKGVDEPY 424 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR----QKRFAKYIQEYNFLRSLLKS 480 RMFTSRAEYRI LR D+AD RLT LG E R + + Q NF ++ Sbjct: 425 RMFTSRAEYRILLRMDDADMRLTERAYHLGLAREDRYQLMKTKKEALEQIVNFAKNYSMK 484 Query: 481 LVLTSKNLSSTSIS-FKQDGKTRTAYEFLSYPDFSIQNLFSICP----DARKFSSL---- 531 L + L + +Q K E L+ P +I+N+ P + K ++ Sbjct: 485 PALINDALEKLGTTPLRQGCKL---IEILNRPQITIENIAEHVPAFQRELEKATAADSDR 541 Query: 532 ---VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 ++E +I Y Y R+ + A+++ E I FDY+S+ +LS E ++KL + Sbjct: 542 KEEILEAAEILIKYQGYIDRERMIAEKLARLESIKIKGKFDYASIQSLSTEARQKLVKID 601 Query: 589 PFNLLQASKIEGMTPAALNLLLI 611 P + QAS+I G++P+ +N+LL+ Sbjct: 602 PETIAQASRIPGVSPSDINVLLV 624 >gi|195151127|ref|XP_002016499.1| GL10454 [Drosophila persimilis] gi|194110346|gb|EDW32389.1| GL10454 [Drosophila persimilis] Length = 479 Score = 452 bits (1164), Expect = e-125, Method: Compositional matrix adjust. Identities = 223/441 (50%), Positives = 306/441 (69%), Gaps = 13/441 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+VIGGGHAG EA+A AA++GA T L+THK TIG MSCNP+ GG+GKGHL+RE+DAL Sbjct: 30 YDVVVIGGGHAGTEASAAAARMGARTLLLTHKLETIGEMSCNPSFGGIGKGHLMREVDAL 89 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DG+ GR D +G+ ++VLN ++GPAV GPR Q DR+LY+ A+Q+E+ S +NL++ V Sbjct: 90 DGVCGRCCDVSGVHYKVLNKRRGPAVWGPRAQIDRQLYKKAVQKELHSTQNLEIRAAAVD 149 Query: 126 GF-----NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 + + +++ + ++R +VVLTTGTFLR I+IG PAGRMGD+P+ Sbjct: 150 NILIEDEQHQHRRCTGVLLANGEVVRSRSVVLTTGTFLRAHINIGLEVRPAGRMGDAPAK 209 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI---TNRQ 237 +L + + F GRLKTGTP R+ ++ + + E+ D+ PFSF+ + Q Sbjct: 210 ALGEAIDRLGFRMGRLKTGTPPRIAKSSVDFSQLERHEGDDPPTPFSFLNSHVWLPAKEQ 269 Query: 238 IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 + C +T T + I+ N+ + + +I GPRYCPSIE KI+RFG R HQ++LEP Sbjct: 270 LPCHLTYTTPLVNDIVRNNLHVNRHVTEEIT--GPRYCPSIESKILRFGARV-HQVWLEP 326 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EGL++ +VYP GIS LP E Q + + I GLE +++PGY +EYD+I+P+ELFPTLET Sbjct: 327 EGLDSPLVYPQGISCTLPHEQQVELVHAIKGLEHAEVVQPGYGVEYDFIDPRELFPTLET 386 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDC--ICFSRTDSYIGVMIDDL 415 K++ GLF AGQINGTTGYEEAAAQG+VAG N+A K+ D + SRT+ YIGV++DDL Sbjct: 387 KRMPGLFFAGQINGTTGYEEAAAQGIVAGANAAGKTRHADGRQLTISRTEGYIGVLVDDL 446 Query: 416 TSKGVLEPYRMFTSRAEYRIS 436 TS G + PYRMFTSRAE+R+S Sbjct: 447 TSLGTMSPYRMFTSRAEFRLS 467 >gi|162446948|ref|YP_001620080.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Acholeplasma laidlawii PG-8A] gi|189039327|sp|A9NEC4|MNMG_ACHLI RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|161985055|gb|ABX80704.1| glucose inhibited division protein A [Acholeplasma laidlawii PG-8A] Length = 617 Score = 452 bits (1164), Expect = e-125, Method: Compositional matrix adjust. Identities = 250/618 (40%), Positives = 364/618 (58%), Gaps = 16/618 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD I++G GHAG EAA AK+ +T LIT + + ++ CNP+IGG KG +VREIDAL Sbjct: 3 YDGIIVGAGHAGVEAALAMAKMKLNTLLITGDLTKVATLPCNPSIGGPAKGIVVREIDAL 62 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + AD + IQ ++LN KGPAVR R Q D+ Y M + + NL ++QG V Sbjct: 63 GGQMAKSADLSQIQMKMLNPSKGPAVRALRAQIDKLKYPKVMLDVLQNTPNLTLLQGFVD 122 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E N + + ++D S + TV++TTGT+L I IG K +G G+ + + N Sbjct: 123 TLIVEDNTVKGVNLEDGSQVFAQTVIITTGTYLGSQILIGHEKTSSGPNGERTTRGISNQ 182 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSF---MTDKITNRQIECGI 242 F+ RLKTGTP R+ +I + KT Q D FS +TD Q + Sbjct: 183 LKNLGFEMLRLKTGTPPRIARDSIDYSKTVPQPGDGVFQTFSHDSPITD--LGHQEFSYL 240 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T+ +T II N+ SA+Y G ++ GPRYCPSIEDK VRF +++ HQIF+EPE ++ Sbjct: 241 IHTSPDTKDIIFNNLDASAMYGGVVEGVGPRYCPSIEDKFVRFKDKDRHQIFIEPESMDL 300 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + +Y G+ST++P+ IQ Q +R++PG+E I+R YAIEYD INP++L+ +LETK I Sbjct: 301 NEMYIQGLSTSMPKHIQEQMVRSLPGMENARIVRYAYAIEYDAINPRQLYQSLETKVIHN 360 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGT+GYEEAA QGL+AGIN+ K + R ++YIGV+IDDL +KG E Sbjct: 361 LFCAGQINGTSGYEEAAGQGLMAGINAGLKVQGKKPLVLKRDEAYIGVLIDDLITKGTSE 420 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYR+ TSRAE+R+ LR DNAD RL G ++G + + +RF + L+ +++ Sbjct: 421 PYRLLTSRAEHRLLLRNDNADIRLRDYGYQIGLVDDATYERFE---HKKIALKEMIERAK 477 Query: 483 LTSKNLSSTSISFKQDGKTRTAYE------FLSYPDFSIQNLFSICPDARKFSSLVIERL 536 T N + ++++ + YE L P+ I+ L P ++ + E+L Sbjct: 478 STKINPTEENLNYLASVNSSPIYEGVTVFKLLERPELKIETLKHFLPS--DYNHEIYEQL 535 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I Y Y + EA ++ E R IP D +Y S+ +S E KEKLS +KP L QA+ Sbjct: 536 EIYIKYDGYIEKARREADKLLRYESRFIPNDINYHSIHNISAEAKEKLSKIKPETLGQAT 595 Query: 597 KIEGMTPAALNLLLIYIK 614 +I G+ P +++LL+Y++ Sbjct: 596 RILGVGPTDVSMLLVYLE 613 >gi|40557589|gb|AAR88089.1| glucose inhibited division protein A [Sweet potato little leaf phytoplasma] Length = 620 Score = 452 bits (1163), Expect = e-125, Method: Compositional matrix adjust. Identities = 252/598 (42%), Positives = 352/598 (58%), Gaps = 15/598 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + Y IV+GGGHAG EAA AK T LIT I S CNP+IGG KG +VREID Sbjct: 31 KYYQSIVVGGGHAGVEAALALAKQSHKTLLITGNLQQIASYPCNPSIGGPAKGVVVREID 90 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G+MG+ AD IQ ++LN KGPAVR R Q D+ Y + + + NL +++ Sbjct: 91 ALGGIMGKAADICQIQMKMLNTSKGPAVRSLRAQIDKIKYPMFILETLKKTLNLTLMEAL 150 Query: 124 VAGFNTEKN--IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V +N + + + + +I V+LTTGT+L I IG I +G + + Sbjct: 151 VEHLIIPENDLCVKGVKLTNGEVIYSDIVILTTGTYLTSKILIGSQVINSGPNKAPTTYN 210 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSF--MTDKITNRQIE 239 + +KF + RLKTGTP R+ TI + +T +Q D+ L FS + D + +++ Sbjct: 211 ISKQLIKFGMEVIRLKTGTPPRVHKDTIDYTQTVEQSGDKVLQTFSSPPVIDNLGVQKL- 269 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +T TN TH++I +N+ SA+YSG + S GP YCPSIEDKIVRF ++N HQ+F+EPE Sbjct: 270 CFLTHTNENTHQLIRQNLHKSAMYSGYVCSSGPPYCPSIEDKIVRFYDKNRHQLFIEPES 329 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L +D +Y G+S ++P E+Q + ++TIP K II+ YAIEYD NP +LF TLE+KK Sbjct: 330 LLSDEMYLQGLSMSMPSEVQEKILKTIPAFSKAKIIKYAYAIEYDAFNPNQLFHTLESKK 389 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I LFLAGQINGT+GYEEAA QGL+AGIN+A K R ++YIGV+IDDL +KG Sbjct: 390 IKNLFLAGQINGTSGYEEAACQGLIAGINAALKLQNKSPFILKRNEAYIGVLIDDLINKG 449 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYR+ TSRAE+R+ LR DNAD RL P G K G I + + N+L+ L Sbjct: 450 TYEPYRLLTSRAEFRLLLRHDNADLRLMPYGFKFGLIDHKTFDWLKNKQMQINYLKEKLH 509 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFS---IQNLFSICPDARKFSSLVIERL 536 + L + +L +I+ D + + Y+ L D + N F A ++S V+E++ Sbjct: 510 NFYLDADSLYKFNIN--SDSRRISLYQLLKRSDLKEDILNNFF-----ASQYSVDVLEQV 562 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 I+ Y Y + E K+ E+++IP + DY + LS E KEKL +KPFN+ Q Sbjct: 563 GIQIKYEDYILKSEKEVKKNSHLEEKVIPNNIDYKIIKNLSQEAKEKLXKIKPFNIAQ 620 >gi|148982566|ref|ZP_01816806.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrionales bacterium SWAT-3] gi|145960411|gb|EDK25802.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrionales bacterium SWAT-3] Length = 450 Score = 452 bits (1163), Expect = e-125, Method: Compositional matrix adjust. Identities = 227/448 (50%), Positives = 293/448 (65%), Gaps = 1/448 (0%) Query: 33 LITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVR 92 L+TH T+G MSCNPAIGG+GKGHLV+E+DA+ GLM + D AGIQFR LN KGPAVR Sbjct: 1 LLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAMGGLMAQAIDHAGIQFRTLNASKGPAVR 60 Query: 93 GPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVL 152 R QADR LY+ ++ + + NL + Q V E++ + +V Q R VVL Sbjct: 61 ATRAQADRALYKAFVRNVLENTPNLTLFQQSVDDLIVEQDQVVGVVTQMGLKFRADAVVL 120 Query: 153 TTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWD 212 T GTFL G IHIG GR GD PS +L + F RLKTGTP R+D +++ + Sbjct: 121 TVGTFLGGKIHIGMESSSGGRAGDPPSIALADRLRDLPFRVDRLKTGTPPRIDARSVDFS 180 Query: 213 KTEKQFADERLIPFSFMTDKITN-RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYG 271 + E Q D FSFM + RQI C IT TN TH +I N+ S +Y+G I+ G Sbjct: 181 ELEVQHGDNPTPVFSFMGSRAQQPRQIPCYITHTNENTHDVIRANLDRSPMYAGVIEGIG 240 Query: 272 PRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEK 331 PRYCPSIEDK++RF ++N HQIF+EPEGL T +YPNGIST+LP ++Q Q +R++ G E Sbjct: 241 PRYCPSIEDKVMRFADKNSHQIFIEPEGLTTHELYPNGISTSLPFDVQVQIVRSMKGFEN 300 Query: 332 VNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSAR 391 +I+RPGYAIEYD+ +P++L T ETK I GLF AGQINGTTGYEEAAAQGL+AG+N++ Sbjct: 301 AHIVRPGYAIEYDFFDPRDLKLTYETKFIKGLFFAGQINGTTGYEEAAAQGLMAGLNASL 360 Query: 392 KSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGM 451 + + R +Y+GV+IDDL++ G EPYRMFTSRAEYR+ LR DNAD RLT Sbjct: 361 FTQGKEGWSPRRDQAYMGVLIDDLSTMGTKEPYRMFTSRAEYRLLLREDNADIRLTEKSR 420 Query: 452 KLGCIGERRQKRFAKYIQEYNFLRSLLK 479 +LG + + R RF + + R LK Sbjct: 421 ELGLVDDARWARFNEKMDNMEKERQRLK 448 >gi|255013155|ref|ZP_05285281.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides sp. 2_1_7] Length = 625 Score = 452 bits (1163), Expect = e-125, Method: Compositional matrix adjust. Identities = 268/624 (42%), Positives = 372/624 (59%), Gaps = 15/624 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAGCEAAA AA LG+ T LIT + I MSCNPA+GG+ KG +VREIDA Sbjct: 4 NYDVIVVGAGHAGCEAAAAAANLGSKTLLITMDMNKIAQMSCNPAVGGIAKGQIVREIDA 63 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG V D IQFR+LN KGPA+ PR Q+DR + + + + NL + Q V Sbjct: 64 LGGYMGIVTDQTAIQFRMLNRSKGPAMWSPRAQSDRARFIDCWRGMLENMPNLSIWQDMV 123 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + N + R VVLT GTFL G++HIG+ +I GR+ + + L Sbjct: 124 QELIIEHGQVCGVRTGMNVVFRAGAVVLTNGTFLNGLLHIGRTQIRGGRIAEPAATGLTE 183 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQIECGIT 243 + T R+KTGTP R+DG+++ +D+ E+Q + FS+M T +Q+ C T Sbjct: 184 QLISLGIQTDRMKTGTPVRIDGRSVHFDEMEEQPGENDFHKFSYMDTSHRKLKQLSCWTT 243 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN H I+ E + S +Y+G IKS GPRYCPSIE KIV F ++ HQ+FLEPEG T Sbjct: 244 FTNEACHDILREGLPDSPLYNGQIKSIGPRYCPSIETKIVTFADKTQHQLFLEPEGETTQ 303 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 Y NG S++LP +IQ + ++ IP V I RPGYAIEYD+ +P +L LETK+I L Sbjct: 304 EYYLNGFSSSLPLDIQLRALQAIPAFRDVQIYRPGYAIEYDFFDPTQLRHNLETKQIRNL 363 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEA QGLVAGIN+ + R ++YIGV+IDDL +KGV EP Sbjct: 364 FFAGQINGTTGYEEAGGQGLVAGINAHINCHGGQPFILGRDEAYIGVLIDDLVTKGVDEP 423 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLG--------CIGERRQKRFA--KYIQEYNF 473 YRMFTSRAEYRI LR D+AD RLT ++G + E+++ R A ++ + Y+ Sbjct: 424 YRMFTSRAEYRILLRQDDADMRLTEKSYQMGLAKQDRYDLLREKKESRDAIIRFAETYSV 483 Query: 474 LRSLLKSLV--LTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL 531 + S + L + LS F + +T E L+ +++ P +RK Sbjct: 484 KPQYINSGLEKLGTAPLSHGCKLFDVVLRPQTTLENLADLVPALRAELDKVPASRK--EE 541 Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 +IE +I Y+ Y R+ I A +I E I FDY+S+ +LS E ++KL+ + P Sbjct: 542 IIEAAEILIKYSGYIKREQIIADKINRLENIRIKGKFDYNSIQSLSTEARQKLTRIDPDT 601 Query: 592 LLQASKIEGMTPAALNLLLIYIKK 615 + QAS+I G++P+ +N+LL+ + + Sbjct: 602 IAQASRIPGISPSDINILLVLLGR 625 >gi|261417286|ref|YP_003250969.1| glucose inhibited division protein A [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373742|gb|ACX76487.1| glucose inhibited division protein A [Fibrobacter succinogenes subsp. succinogenes S85] gi|302327734|gb|ADL26935.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Fibrobacter succinogenes subsp. succinogenes S85] Length = 633 Score = 452 bits (1163), Expect = e-125, Method: Compositional matrix adjust. Identities = 264/641 (41%), Positives = 368/641 (57%), Gaps = 32/641 (4%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 MI +DV+V+GGGHAG EA A K+G TA++T + IG MSCNPA+GG+ KG +VR Sbjct: 1 MIIAEFDVVVVGGGHAGIEATHAAWKIGVKTAMLTMDLNAIGRMSCNPAVGGVAKGQIVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 +IDAL GLMG + D AGIQFR+LN+ KGPAV GPR Q D + Y + + S L +I Sbjct: 61 DIDALGGLMGLLTDKAGIQFRMLNMSKGPAVWGPRAQCDMKYYSEVARETMESLPGLTLI 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 QGE+A F + +++ + +V+T+GTFL + G GR+G+ ++ Sbjct: 121 QGELASFERMNDGRLELILLNGDRYITRAIVVTSGTFLASKMFTGLETSIGGRVGEPSAD 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFS------FMTDKIT 234 L K RLKTGTP+RLD +I +++ + Q DE P S DK Sbjct: 181 KLSECLAKNGIRLRRLKTGTPSRLDPDSIDFNECDVQHGDEHPWPMSDRHFDGATPDKFW 240 Query: 235 NRQIE--------CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFG 286 QI C ITRTN++TH I+ K S ++SG I GPRYCPSIEDKI RFG Sbjct: 241 GDQINKFIRNDCVCWITRTNIKTHDILRSGFKDSPMFSGRIHGKGPRYCPSIEDKINRFG 300 Query: 287 ERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI 346 +R+GHQ+FLEPE + VY NG S++LP +IQ I TIPGL + +++ GYA+EYD + Sbjct: 301 DRDGHQLFLEPEQADIGRVYINGFSSSLPADIQLAAIHTIPGLTRAKVLQIGYAVEYDSV 360 Query: 347 NPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDS 406 + +L+PT E K + GL+ AGQ+ GT+GYEEAA QGL+AGIN+A K + R++S Sbjct: 361 DATQLYPTFECKNVPGLYFAGQVCGTSGYEEAAGQGLMAGINAALKVKGEEPFILGRSES 420 Query: 407 YIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAK 466 Y+GVM+DDL + + EPYRMFTSRAEYR+ LR DNA+ RL K+G I +R + Sbjct: 421 YLGVMVDDLVNILLDEPYRMFTSRAEYRLFLRSDNAEMRLKEKARKIGMISDR---DWED 477 Query: 467 YIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKT----RTAY-EFLSYPDFSIQNLFSI 521 + + + + SL TS + + G+ RT + L P + F + Sbjct: 478 WTRRRDLMASLKTQFTETSATPEEANTILEAGGQALASERTRWINVLRRPGIDPETFFKV 537 Query: 522 -CPDARKFSSLVIERLQI----ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPAL 576 PDA + R Q E YA + RQ E + K EK + DFDY S+ A+ Sbjct: 538 AAPDAN-----ITRRDQWYMYAEELYAGFFDRQEREIDDQKKMEKVKLSPDFDYMSITAI 592 Query: 577 SNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNT 617 S E +++L+ KP L QAS++ G+ PA + +L ++ T Sbjct: 593 SIESRQRLNAHKPLTLGQASRVPGVRPADITVLAHWLDSRT 633 >gi|320527142|ref|ZP_08028329.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Solobacterium moorei F0204] gi|320132470|gb|EFW25013.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Solobacterium moorei F0204] Length = 624 Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust. Identities = 248/622 (39%), Positives = 369/622 (59%), Gaps = 17/622 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D+IVIGGGHAG EAA AA+L +T L+T K IG M CNP++GG KG +VREIDAL Sbjct: 4 FDIIVIGGGHAGIEAALAAARLKKNTCLLTLKIENIGKMPCNPSVGGPAKGIVVREIDAL 63 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M AD +QF++LN KGP VR R Q+D+ Y+ MQ L QENL VI+G + Sbjct: 64 GGQMAITADKTALQFKMLNGAKGPGVRALRVQSDKLAYKKMMQDVCLKQENLTVIEGMAS 123 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 N N ++ + ++D +++ V++TTGT++ GV I P G + + L S Sbjct: 124 KLNVTNNKVTGVTLKDGTVLNAKIVIVTTGTYMAGVNMISSEVTPGGPDLEPTTGDLSES 183 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT----NRQIECG 241 + T RLKTGTP R+ +I + KT+ + E + FS +T + ++Q+ C Sbjct: 184 LRELGLRTFRLKTGTPPRILRSSIDFSKTKLEPGTEGFLHFSELTTREDVLPYDKQVSCH 243 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T T ETH I+EN+ S++YSG +K GPRYCPSIEDK+VRF ++ H +FLEPE L Sbjct: 244 MTYTTPETHEYILENLNKSSMYSGVVKGVGPRYCPSIEDKLVRFQDKPRHLLFLEPESLE 303 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 D +Y G ST+LP +IQ + + ++PG E I + YAIEYD I+P ++ P+ E+K I Sbjct: 304 LDTIYLQGFSTSLPRDIQEKMVHSLPGFENAIIKKYAYAIEYDAIDPIQMKPSFESKIIE 363 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 LF AGQ+NGT+GYEEAA QGL+AGIN+ K + + + +R ++YIGV++DDLT+KG L Sbjct: 364 NLFTAGQVNGTSGYEEAAGQGLLAGINACMKLDGKEPLILARNEAYIGVLVDDLTTKGTL 423 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAE+R+ LR DNAD RL G ++G + Q+R+ Y+ + ++ L + L Sbjct: 424 EPYRLLTSRAEFRLLLRHDNADQRLIEYGRQIGLVS---QERYDAYLAKMENIKKLEQHL 480 Query: 482 VLTS-------KNLSSTSISFKQDGKTR-TAYEFLSYPDFSIQNLFSICPDARKFSSLVI 533 T+ + TS+ ++ D + + P+ + + L + + + Sbjct: 481 SETTFVQDEEKVHAYLTSLGYESDAHIGINGIDLVRRPNVTTKELLATI--GEEADEEIA 538 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 + IE YA Y + EA ++K + + +F+Y + LS E ++KL KP + Sbjct: 539 NQCDIELKYAGYIEKAKREANKLKEMDSIKLGVNFNYDEVDNLSIEGRQKLMKYKPATMG 598 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QA +I G+ PA + +L I IK+ Sbjct: 599 QAFRISGVNPADIAVLAIAIKQ 620 >gi|262383154|ref|ZP_06076291.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides sp. 2_1_33B] gi|301311746|ref|ZP_07217671.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides sp. 20_3] gi|262296032|gb|EEY83963.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides sp. 2_1_33B] gi|300830306|gb|EFK60951.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides sp. 20_3] Length = 625 Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust. Identities = 268/624 (42%), Positives = 372/624 (59%), Gaps = 15/624 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAGCEAAA AA LG+ T LIT + I MSCNPA+GG+ KG +VREIDA Sbjct: 4 NYDVIVVGAGHAGCEAAAAAANLGSKTLLITMDMNKIAQMSCNPAVGGIAKGQIVREIDA 63 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG V D IQFR+LN KGPA+ PR Q+DR + + + + NL + Q V Sbjct: 64 LGGYMGIVTDQTAIQFRMLNRSKGPAMWSPRAQSDRARFIDCWRGILENMPNLSIWQDMV 123 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + N + R VVLT GTFL G++HIG+ +I GR+ + + L Sbjct: 124 QELIIEHGQVCGVRTGMNVVFRAGAVVLTNGTFLNGLLHIGRTQIRGGRIAEPAATGLTE 183 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQIECGIT 243 + T R+KTGTP R+DG+++ +D+ E+Q + FS+M T +Q+ C T Sbjct: 184 QLISLGIQTDRMKTGTPVRIDGRSVHFDEMEEQPGENDFHKFSYMDTSHRKLKQLSCWTT 243 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN H I+ E + S +Y+G IKS GPRYCPSIE KIV F ++ HQ+FLEPEG T Sbjct: 244 FTNETCHDILREGLPDSPLYNGQIKSIGPRYCPSIETKIVTFADKTQHQLFLEPEGETTQ 303 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 Y NG S++LP +IQ + ++ IP V I RPGYAIEYD+ +P +L LETK+I L Sbjct: 304 EYYLNGFSSSLPLDIQLRALQAIPAFRDVQIYRPGYAIEYDFFDPTQLRHNLETKQIRNL 363 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEA QGLVAGIN+ + R ++YIGV+IDDL +KGV EP Sbjct: 364 FFAGQINGTTGYEEAGGQGLVAGINAHINCHGGQPFILGRDEAYIGVLIDDLVTKGVDEP 423 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLG--------CIGERRQKRFA--KYIQEYNF 473 YRMFTSRAEYRI LR D+AD RLT ++G + E+++ R A ++ + Y+ Sbjct: 424 YRMFTSRAEYRILLRQDDADMRLTEKSYQMGLAKQDRYDLLREKKESRDAIIRFAETYSV 483 Query: 474 LRSLLKSLV--LTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL 531 + S + L + LS F + +T E L+ +++ P +RK Sbjct: 484 KPQYINSGLEKLGTAPLSHGCKLFDVVLRPQTTLENLADLVPALRAELDKVPASRK--EE 541 Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 +IE +I Y+ Y R+ I A +I E I FDY+S+ +LS E ++KL+ + P Sbjct: 542 IIEAAEILIKYSGYIKREQIIADKINRLENIRIKGKFDYNSIQSLSTEARQKLTRIDPDT 601 Query: 592 LLQASKIEGMTPAALNLLLIYIKK 615 + QAS+I G++P+ +N+LL+ + + Sbjct: 602 IAQASRIPGISPSDINILLVLLGR 625 >gi|253568978|ref|ZP_04846388.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacteroides sp. 1_1_6] gi|251840997|gb|EES69078.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacteroides sp. 1_1_6] Length = 628 Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust. Identities = 262/623 (42%), Positives = 369/623 (59%), Gaps = 20/623 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAGCEAAA AA LG+ T LIT + IG MSCNPA+GG+ KG +VREIDAL Sbjct: 5 YDVIVIGAGHAGCEAAAAAANLGSKTCLITMDMNKIGQMSCNPAVGGIAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG V D IQFR+LN KGPA+ PR Q DR + + + ++ + NL + Q V Sbjct: 65 GGQMGLVTDETAIQFRILNRSKGPAMWSPRAQCDRAKFIWSWREKLENTPNLHIWQDTVC 124 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + +V + +VLT GTFL G++H+G+ ++P GRM + S L S Sbjct: 125 ELLVENGEVVGLVTLWGVTFKAKCIVLTAGTFLNGLMHVGRHQLPGGRMAEPASYQLTES 184 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GR+KTGTP R+D ++I +D + Q + FSFM + +Q++C Sbjct: 185 IARHGIAYGRMKTGTPVRIDARSIHFDLMDTQDGECDFHKFSFMNTSTRHLKQLQCWTCY 244 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN E HRI+ + + S +++G I+S GPRYCPSIE KIV F ++ HQ+FLEPEG T Sbjct: 245 TNEEVHRILRKGLPDSPLFNGQIQSIGPRYCPSIETKIVTFPDKEQHQLFLEPEGETTQE 304 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y NG S++LP +IQ ++ +P + + I RPGYAIEYDY +P +L +LE+K I LF Sbjct: 305 LYLNGFSSSLPMDIQIAALKKVPAFKDIVIYRPGYAIEYDYFDPTQLKHSLESKIIKNLF 364 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ+NGTTGYEEA QGL+AGIN+ + + +R ++YIGV+IDDL +KGV EPY Sbjct: 365 FAGQVNGTTGYEEAGGQGLIAGINAHINCHGGEAFTLARDEAYIGVLIDDLVTKGVDEPY 424 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR----QKRFAKYIQEYNFLRSLLKS 480 RMFTSRAEYRI LR D+AD RLT LG E R + + Q NF ++ Sbjct: 425 RMFTSRAEYRILLRMDDADMRLTERAYHLGLAREDRYQLMKTKKEALEQIVNFAKNYSMK 484 Query: 481 LVLTSKNLSSTSIS-FKQDGKTRTAYEFLSYPDFSIQNLFSICP----DARKFSSL---- 531 L + L + +Q K E L+ P +I+N+ P + K ++ Sbjct: 485 PALINDALEKLGTTPLRQGCKL---IEILNRPQITIENIAEHVPAFQRELEKATAADSDR 541 Query: 532 ---VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 ++E +I Y Y R+ + A+++ E I FDY+S+ +LS E ++KL + Sbjct: 542 KEEILEAAEILIKYQGYIDRERMIAEKLARLESIKIKGKFDYASIQSLSTEARQKLMKID 601 Query: 589 PFNLLQASKIEGMTPAALNLLLI 611 P + QAS+I G++P+ +N+LL+ Sbjct: 602 PETIAQASRIPGVSPSDINVLLV 624 >gi|298373957|ref|ZP_06983915.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides sp. 3_1_19] gi|298268325|gb|EFI09980.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacteroides sp. 3_1_19] Length = 625 Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust. Identities = 268/624 (42%), Positives = 372/624 (59%), Gaps = 15/624 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAGCEAAA AA LG+ T LIT + I MSCNPA+GG+ KG +VREIDA Sbjct: 4 NYDVIVVGAGHAGCEAAAAAANLGSKTLLITMDMNKIAQMSCNPAVGGIAKGQIVREIDA 63 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG V D IQFR+LN KGPA+ PR Q+DR + + + + NL + Q V Sbjct: 64 LGGYMGIVTDQTAIQFRMLNRSKGPAMWSPRAQSDRARFIDCWRGILENMPNLSIWQDMV 123 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + N + R VVLT GTFL G++HIG+ +I GR+ + + L Sbjct: 124 QELIIEHGQVCGVRTGMNVVFRAGAVVLTNGTFLNGLLHIGRTQIRGGRIAEPAATGLTE 183 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQIECGIT 243 + T R+KTGTP R+DG+++ +D+ E+Q + FS+M T +Q+ C T Sbjct: 184 QLVSLGIQTDRMKTGTPVRIDGRSVHFDEMEEQPGENDFHKFSYMDTSHRKLKQLSCWTT 243 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN H I+ E + S +Y+G IKS GPRYCPSIE KIV F ++ HQ+FLEPEG T Sbjct: 244 FTNEACHDILREGLPDSPLYNGQIKSIGPRYCPSIETKIVTFADKTQHQLFLEPEGEATQ 303 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 Y NG S++LP +IQ + ++ IP V I RPGYAIEYD+ +P +L LETK+I L Sbjct: 304 EYYLNGFSSSLPLDIQLRALQAIPAFRDVQIYRPGYAIEYDFFDPTQLRHNLETKQIRNL 363 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEA QGLVAGIN+ + R ++YIGV+IDDL +KGV EP Sbjct: 364 FFAGQINGTTGYEEAGGQGLVAGINAHINCHGGQPFILGRDEAYIGVLIDDLVTKGVDEP 423 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLG--------CIGERRQKRFA--KYIQEYNF 473 YRMFTSRAEYRI LR D+AD RLT ++G + E+++ R A ++ + Y+ Sbjct: 424 YRMFTSRAEYRILLRQDDADMRLTEKSHQMGLAKQDRYDLLREKKESRDAIIRFAETYSV 483 Query: 474 LRSLLKSLV--LTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL 531 + S + L + LS F + +T E L+ +++ P +RK Sbjct: 484 KPQYINSGLEKLGTAPLSHGCKLFDVVLRPQTTLENLADLVPALRAELDKVPASRK--EE 541 Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 +IE +I Y+ Y R+ I A +I E I FDY+S+ +LS E ++KL+ + P Sbjct: 542 IIEAAEILIKYSGYIKREQIIADKINRLENIRIKGKFDYNSIQSLSTEARQKLTRIDPDT 601 Query: 592 LLQASKIEGMTPAALNLLLIYIKK 615 + QAS+I G++P+ +N+LL+ + + Sbjct: 602 IAQASRIPGISPSDINILLVLLGR 625 >gi|282856278|ref|ZP_06265559.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pyramidobacter piscolens W5455] gi|282585855|gb|EFB91142.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pyramidobacter piscolens W5455] Length = 630 Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust. Identities = 255/613 (41%), Positives = 349/613 (56%), Gaps = 7/613 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+GGGHAGCEAA AA +GA T +I + M CNP+IGG KGHLVREI A Sbjct: 8 TFDVIVVGGGHAGCEAALAAAHMGARTLMIVQDVDHVAHMPCNPSIGGPAKGHLVREISA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G+ R ADAA + R LN KGPAVR R Q D Y RE+++ NL V Q +V Sbjct: 68 LGGVQARAADAAAMMMRWLNTSKGPAVRALRAQCDLHDYHGYYLRELVNCPNLRVFQDQV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + + + V+LTTGT L G +H+G + +G MG P+ L Sbjct: 128 DALWVENDRLKGVKTRFQLSFEAPRVILTTGTHLGGRVHVGLVNFASGPMGQQPAVGLSR 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S + RLKTGT RL +I W E Q D + F F +K R+I CG+ R Sbjct: 188 SIAELGIVMQRLKTGTTPRLYRDSIDWSHIELQEGDPHPVGFDFWDEKKIRREISCGMIR 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN THRII +N+ S I G+I GPRYCPSIE K++ F E++ H IFLEP + Sbjct: 248 TNARTHRIIKDNLDRSPIVHGEITGVGPRYCPSIESKVMAFPEKDSHPIFLEPVARGSVE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y ST+LP ++Q RT+PG E+ I+RPGYAIEYD I+P++L +LE K++ GLF Sbjct: 308 IYVQNFSTSLPFDVQIAMTRTLPGCERAVILRPGYAIEYDAIDPQQLSLSLEMKRLPGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA+QGL+AG+N+ + + R ++Y+GV++DDL +KG EPY Sbjct: 368 CAGQINGTSGYEEAASQGLLAGVNAVLSMRGEEPLVLRRHEAYLGVLVDDLVTKGTHEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFA-KYIQEYNFLRSLLKSLVL 483 RM TSR E+R+ LR DNAD RL PIG +LG + + + ++ ++ +E + +L + V Sbjct: 428 RMLTSRCEHRLLLRHDNADRRLAPIGRRLGLLDDEKWRQLCERWEREDQEIETLERVHVA 487 Query: 484 -TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS- 541 T N + + +A E L P+ + L I PD R E +E++ Sbjct: 488 PTPANAVLAEEGLRPLERGMSAAELLRRPEVDYELLCRIVPDGRLKGE---EAANVETAV 544 Query: 542 -YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ ++ E IP FDY L L E +EKL ++P L QA +I G Sbjct: 545 KYQGYIARQQAAVDKMLRLESMKIPVGFDYGELRGLLAESREKLERVRPMTLGQAGRISG 604 Query: 601 MTPAALNLLLIYI 613 +TP L L +Y+ Sbjct: 605 VTPTDLQHLALYL 617 >gi|288801783|ref|ZP_06407225.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prevotella melaninogenica D18] gi|288335825|gb|EFC74258.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Prevotella melaninogenica D18] Length = 598 Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust. Identities = 245/606 (40%), Positives = 353/606 (58%), Gaps = 25/606 (4%) Query: 27 LGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVK 86 +GA+T L+T + IG MSCNPA+GG+ KG +VREIDAL G MG V DA IQF +LN Sbjct: 1 MGANTCLVTMDMNKIGQMSCNPAVGGIAKGQIVREIDALGGYMGLVTDATAIQFHMLNRS 60 Query: 87 KGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIR 146 KGPAV PR Q DR + + + +NLD+ Q + E + I I Sbjct: 61 KGPAVWSPRAQCDRGKFIWEWRTILDHTDNLDIFQDQADELLVENGKVLGIKTIWGIDIY 120 Query: 147 CSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDG 206 TV++T GTFL G++HIGK K+ GR + ++ S + R+KTGTP R+D Sbjct: 121 ARTVIITAGTFLNGLMHIGKRKVEGGRCAEPAVHNFTESITRHGIRADRMKTGTPVRIDR 180 Query: 207 KTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGD 266 +++ +D+ E Q + FSF Q+ C TN E H ++ + S +++G Sbjct: 181 RSVHFDEMEPQPGETDYHQFSFYGPHRHLPQLPCWTCNTNEEAHEVLRRGVADSPLFNGQ 240 Query: 267 IKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTI 326 I+S GPRYCPSIE K+V F ++N H +FLEPEG++T+ +Y NG S+++P E+Q + I I Sbjct: 241 IQSTGPRYCPSIETKLVTFPDKNSHPLFLEPEGVDTNEMYLNGFSSSMPWEVQLEAIHKI 300 Query: 327 PGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAG 386 P L I RPGYAIEYDY +P +L +LE+K I GLF AGQ+NGTTGYEEA QGLVAG Sbjct: 301 PALRDAKIYRPGYAIEYDYFDPTQLKQSLESKVIEGLFFAGQVNGTTGYEEAGGQGLVAG 360 Query: 387 INSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRL 446 IN+A D +R +SYIGV+IDDLT+KGV EPYRMFTSRAEYRI LR D+AD RL Sbjct: 361 INAALLCAGKDPFVMNRDESYIGVLIDDLTTKGVDEPYRMFTSRAEYRILLRQDDADARL 420 Query: 447 TPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS----------KNLSSTSISFK 496 T +G +Q R+ ++Q+ + +L TS ++L ++ I Sbjct: 421 TERAYNIGIA---KQDRYDWWMQKKEHINRILDFCNNTSVKPEVVNGFLEHLGTSPIK-- 475 Query: 497 QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-------SSLVIERLQIESSYAAYTGRQ 549 G T+ + ++ P + +NL ++ P ++ + E +I+ Y Y R+ Sbjct: 476 --GATKIV-DLVARPQVNFENLSAVIPSLKEAIEASPNRKEEIAEAAEIKLKYKGYIDRE 532 Query: 550 MIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLL 609 + A++++ E I F YS L LS E ++KL ++P L QAS+I G++P+ +N+L Sbjct: 533 RVFAEKMRRLEDIKIKGHFKYSELHDLSTECRQKLEQIQPETLAQASRIPGVSPSDINVL 592 Query: 610 LIYIKK 615 L+ + + Sbjct: 593 LVLMGR 598 >gi|150009552|ref|YP_001304295.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Parabacteroides distasonis ATCC 8503] gi|166222714|sp|A6LG59|MNMG_PARD8 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|149937976|gb|ABR44673.1| glucose-inhibited division protein A [Parabacteroides distasonis ATCC 8503] Length = 625 Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust. Identities = 268/624 (42%), Positives = 372/624 (59%), Gaps = 15/624 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAGCEAAA AA LG+ T LIT + I MSCNPA+GG+ KG +VREIDA Sbjct: 4 NYDVIVVGAGHAGCEAAAAAANLGSKTLLITMDMNKIAQMSCNPAVGGIAKGQIVREIDA 63 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG V D IQFR+LN KGPA+ PR Q+DR + + + + NL + Q V Sbjct: 64 LGGYMGIVTDQTAIQFRMLNRSKGPAMWSPRAQSDRARFIDCWRGILENMPNLSIWQDMV 123 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + N + R VVLT GTFL G++HIG+ +I GR+ + + L Sbjct: 124 QELIIEHGQVCGVRTGMNVVFRAGAVVLTNGTFLNGLLHIGRTQIRGGRIAEPAATGLTE 183 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQIECGIT 243 + T R+KTGTP R+DG+++ +D+ E+Q + FS+M T +Q+ C T Sbjct: 184 QLISLGIQTDRMKTGTPVRIDGRSVHFDEMEEQPGENDFHKFSYMDTSHRKLKQLSCWTT 243 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN H I+ E + S +Y+G IKS GPRYCPSIE KIV F ++ HQ+FLEPEG T Sbjct: 244 FTNEACHDILREGLPDSPLYNGQIKSIGPRYCPSIETKIVTFADKTQHQLFLEPEGEATQ 303 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 Y NG S++LP +IQ + ++ IP V I RPGYAIEYD+ +P +L LETK+I L Sbjct: 304 EYYLNGFSSSLPLDIQLRALQAIPAFRDVQIYRPGYAIEYDFFDPTQLRHNLETKQIRNL 363 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEA QGLVAGIN+ + R ++YIGV+IDDL +KGV EP Sbjct: 364 FFAGQINGTTGYEEAGGQGLVAGINAHINCHGGQPFILGRDEAYIGVLIDDLVTKGVDEP 423 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLG--------CIGERRQKRFA--KYIQEYNF 473 YRMFTSRAEYRI LR D+AD RLT ++G + E+++ R A ++ + Y+ Sbjct: 424 YRMFTSRAEYRILLRQDDADMRLTEKSYQMGLAKQDRYDLLREKKESRDAIIRFAETYSV 483 Query: 474 LRSLLKSLV--LTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL 531 + S + L + LS F + +T E L+ +++ P +RK Sbjct: 484 KPQYINSGLEKLGTAPLSHGCKLFDVVLRPQTTLENLADLVPALRAELDKVPASRK--EE 541 Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 +IE +I Y+ Y R+ I A +I E I FDY+S+ +LS E ++KL+ + P Sbjct: 542 IIEAAEILIKYSGYIKREQIIADKINRLENIRIKGKFDYNSIQSLSTEARQKLTRIDPDT 601 Query: 592 LLQASKIEGMTPAALNLLLIYIKK 615 + QAS+I G++P+ +N+LL+ + + Sbjct: 602 IAQASRIPGISPSDINILLVLLGR 625 >gi|256838284|ref|ZP_05543794.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Parabacteroides sp. D13] gi|256739203|gb|EEU52527.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Parabacteroides sp. D13] Length = 625 Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust. Identities = 271/625 (43%), Positives = 373/625 (59%), Gaps = 17/625 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAGCEAAA AA LG+ T LIT + I MSCNPA+GG+ KG +VREIDA Sbjct: 4 NYDVIVVGAGHAGCEAAAAAANLGSKTLLITMDMNKIAQMSCNPAVGGIAKGQIVREIDA 63 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQE-NLDVIQGE 123 L G MG V D IQFR+LN KGPA+ PR Q+DR + + R IL NL + Q Sbjct: 64 LGGYMGIVTDQTAIQFRMLNRSKGPAMWSPRAQSDRARF-IDCWRGILENMLNLSIWQDM 122 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + + N + R VVLT GTFL G++HIG+ +I GR+ + + L Sbjct: 123 VQELIIEHGQVCGVRTGMNVVFRAGAVVLTNGTFLNGLLHIGRTQIRGGRIAEPAATGLT 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQIECGI 242 + T R+KTGTP R+DG+++ +D+ E+Q + FS+M T +Q+ C Sbjct: 183 EQLVSLGIQTDRMKTGTPVRIDGRSVHFDEMEEQPGENDFHKFSYMDTSHRKLKQLSCWT 242 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN H I+ E + S +Y+G IKS GPRYCPSIE KIV F ++ HQ+FLEPEG T Sbjct: 243 TFTNEACHDILREGLPDSPLYNGQIKSIGPRYCPSIETKIVTFADKTQHQLFLEPEGEAT 302 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 Y NG S++LP +IQ + ++ IP V I RPGYAIEYD+ +P +L LETK+I Sbjct: 303 QEYYLNGFSSSLPLDIQLRALQAIPAFRDVQIYRPGYAIEYDFFDPTQLRHNLETKQIRN 362 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEA QGLVAGIN+ + R ++YIGV+IDDL +KGV E Sbjct: 363 LFFAGQINGTTGYEEAGGQGLVAGINAHINCHGGQPFILGRDEAYIGVLIDDLVTKGVDE 422 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLG--------CIGERRQKRFA--KYIQEYN 472 PYRMFTSRAEYRI LR D+AD RLT ++G + E+++ R A ++ + Y+ Sbjct: 423 PYRMFTSRAEYRILLRQDDADMRLTEKSYQMGLAKQDRYDLLREKKESRDAIIRFAETYS 482 Query: 473 FLRSLLKSLV--LTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS 530 + S + L + LS F + +T E L+ +++ P +RK Sbjct: 483 VKPQYINSGLEKLGTAPLSHGCKLFDVVLRPQTTLENLADLVPALRAELDKVPASRK--E 540 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 +IE +I Y+ Y R+ I A +I E I FDY+S+ +LS E ++KL+ + P Sbjct: 541 EIIEAAEILIKYSGYIKREQIIADKINRLENIRIKGKFDYNSIQSLSTEARQKLTRIDPD 600 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 + QAS+I G++P+ +N+LL+ + + Sbjct: 601 TIAQASRIPGISPSDINILLVLLGR 625 >gi|330723615|gb|AEC45985.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Mycoplasma hyorhinis MCLD] Length = 619 Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust. Identities = 256/616 (41%), Positives = 366/616 (59%), Gaps = 24/616 (3%) Query: 6 YDVIVIGGGHAGCEAA-AVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++ IV+GGGHAG EA A++ AL+T + SM CNP+IGG KG + REIDA Sbjct: 8 FNAIVVGGGHAGIEAIYALSKAENLKVALVTLNKHKLASMPCNPSIGGPAKGIITREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G+ G +D A IQ + LN KGPAV+ R Q D+E Y + ++I ++N+ +I+ V Sbjct: 68 LGGVQGYFSDLAMIQVKYLNESKGPAVKAIRAQIDKEKYSKLILKDIKQRKNITLIEDLV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + IS I ++ +I+ ++++TTGT+L I G+ + +G + SN L + Sbjct: 128 TKLEVKNKAISGIYLEKLGLIKTKSLIITTGTYLDSKILRGEEQYKSGPDNERTSNLLSD 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + + F+ RLKTGTP R+ +I + + E++ I FS T + +QI C +T Sbjct: 188 NLKELGFELQRLKTGTPPRIYSDSIDFSQVEREVLPLVNISFSSKTKQNIKKQISCFLTY 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN ETH+II EN+ S++YSG I GPRYCPSIEDKIVRF + HQIF EPE D+ Sbjct: 248 TNEETHKIINENLNRSSMYSGAINGVGPRYCPSIEDKIVRFSTKERHQIFFEPETKRQDI 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y NG+ST++P ++Q + IRTIPGL+ + + GYAIEYD +NP EL +LE+KK+ LF Sbjct: 308 MYINGMSTSMPVDVQDKLIRTIPGLKNARVAKWGYAIEYDALNPLELKRSLESKKVKNLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ+NGT+GYEEAAAQGLVAGIN+ K K I R D YIGV+IDDL +KG EPY Sbjct: 368 FAGQMNGTSGYEEAAAQGLVAGINAKEKLLKKRPIEILRNDGYIGVLIDDLVTKGTKEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSRAEYR+ LR DNAD R+ K G I K + K I++Y + ++ L Sbjct: 428 RMLTSRAEYRLILRNDNADIRMAKYAKKTGMIS---LKEYEKIIEKYRKIDKMIDKL--- 481 Query: 485 SKNLSSTSISFKQ-----DGKTRTAYEFLSYPDFSIQNLFSICPDAR-KFSSLVIERLQI 538 SK S + DG ++ + +S P ++ + PD + +VI RL+ Sbjct: 482 SKEFVSPKDKLGKKYEVSDGTSKL--KLISRPTVDYKD---VLPDFEYAYELMVIARLE- 535 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 Y +Q +A+++ EK IP + DY + LS+E +KL ++P + QAS+I Sbjct: 536 -----GYIRKQNNDAQKMIRLEKLKIPANIDYKKVNNLSSESVDKLMKIRPNTIGQASRI 590 Query: 599 EGMTPAALNLLLIYIK 614 G+ PA + +LL Y+K Sbjct: 591 SGVNPADIQMLLFYLK 606 >gi|304372809|ref|YP_003856018.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Mycoplasma hyorhinis HUB-1] gi|304309000|gb|ADM21480.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Mycoplasma hyorhinis HUB-1] Length = 619 Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust. Identities = 256/616 (41%), Positives = 366/616 (59%), Gaps = 24/616 (3%) Query: 6 YDVIVIGGGHAGCEAA-AVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++ IV+GGGHAG EA A++ AL+T + SM CNP+IGG KG + REIDA Sbjct: 8 FNAIVVGGGHAGIEAIYALSKAENLKVALVTLNKHKLASMPCNPSIGGPAKGIITREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G+ G +D A IQ + LN KGPAV+ R Q D+E Y + ++I ++N+ +I+ V Sbjct: 68 LGGVQGYFSDLAMIQVKYLNESKGPAVKAIRAQIDKEKYSKLILKDIKQRKNITLIEDLV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + IS I ++ +I+ ++++TTGT+L I G+ + +G + SN L + Sbjct: 128 TKLEVKNKAISGIYLEKLGLIKTKSLIITTGTYLDSKILRGEEQYKSGPDNERTSNLLSD 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + + F+ RLKTGTP R+ +I + + E++ I FS T + +QI C +T Sbjct: 188 NLKELGFELQRLKTGTPPRIYSDSIDFSQVEREVLPLVNISFSSKTKQNIKKQISCFLTY 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN ETH+II EN+ S++YSG I GPRYCPSIEDKIVRF + HQIF EPE D+ Sbjct: 248 TNEETHKIINENLNRSSMYSGAINGVGPRYCPSIEDKIVRFSTKERHQIFFEPETKRQDI 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y NG+ST++P ++Q + IRTIPGL+ + + GYAIEYD +NP EL +LE+KK+ LF Sbjct: 308 MYINGMSTSMPVDVQDKLIRTIPGLKNARVAKWGYAIEYDALNPLELKRSLESKKVKNLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ+NGT+GYEEAAAQGLVAGIN+ K K I R D YIGV+IDDL +KG EPY Sbjct: 368 FAGQMNGTSGYEEAAAQGLVAGINAKEKLLKRRPIEILRNDGYIGVLIDDLVTKGTKEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSRAEYR+ LR DNAD R+ K G I K + K I++Y + ++ L Sbjct: 428 RMLTSRAEYRLILRNDNADIRMAKYAKKTGMIS---LKEYEKIIEKYRKIDKMIDKL--- 481 Query: 485 SKNLSSTSISFKQ-----DGKTRTAYEFLSYPDFSIQNLFSICPDAR-KFSSLVIERLQI 538 SK S + DG ++ + +S P ++ + PD + +VI RL+ Sbjct: 482 SKEFVSPKDKLGKKYEVSDGTSKL--KLISRPTVDYKD---VLPDFEYAYELMVIARLE- 535 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 Y +Q +A+++ EK IP + DY + LS+E +KL ++P + QAS+I Sbjct: 536 -----GYIRKQNNDAQKMIRLEKLKIPANIDYKKVNNLSSESVDKLMKIRPNTIGQASRI 590 Query: 599 EGMTPAALNLLLIYIK 614 G+ PA + +LL Y+K Sbjct: 591 SGVNPADIQMLLFYLK 606 >gi|291520338|emb|CBK75559.1| glucose-inhibited division protein A [Butyrivibrio fibrisolvens 16/4] Length = 565 Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust. Identities = 241/564 (42%), Positives = 333/564 (59%), Gaps = 11/564 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +YDV+VIG GHAGCEAA +A++G +T T ++ M CNP IGG KGHLVRE Sbjct: 4 VEETYDVVVIGAGHAGCEAALASARMGLNTICFTISMDSVAMMPCNPNIGGSSKGHLVRE 63 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DAL G MG D IQ ++LN KGPAV R QAD+ Y M++ + ENL + Q Sbjct: 64 LDALGGQMGINIDHTFIQSKMLNSSKGPAVHSLRAQADKAAYSQRMRKTMQDTENLTLRQ 123 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 EV E N + + + C ++ TGT+LR G + G G +N Sbjct: 124 AEVTELIIENNKVCGVKTLSGATYHCKAAIICTGTYLRARCLYGDVIEHNGPNGLKAANY 183 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK--ITNRQIE 239 L +S + + D R KTGTPAR+D +I + K E Q D ++PFSF T + + Q+ Sbjct: 184 LTDSLLANNVDMNRFKTGTPARIDSNSIDYSKMEIQLGDNPVVPFSFSTKREDVQIEQVP 243 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +T TN +TH II N+ S +YSG I+ GPRYCPSIEDK+VRF ++N HQ+F+EPEG Sbjct: 244 CYLTYTNEKTHEIIRANLDRSPMYSGVIEGTGPRYCPSIEDKVVRFSDKNRHQLFVEPEG 303 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 LNT+ +Y G+S+++PE++Q+ RT+PGLE I+R YAIEYD IN +L +LE K Sbjct: 304 LNTNEMYIGGMSSSMPEDVQYAMYRTVPGLENCKIVRNAYAIEYDCINATQLKASLEFKD 363 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I+GLF AGQ NG++GYEEAAAQGLVAGIN+A K + + + R++SYIGV+IDDL +K Sbjct: 364 INGLFAAGQFNGSSGYEEAAAQGLVAGINAALKVLEKNPMILDRSNSYIGVLIDDLVTKE 423 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRM TSRAEYR+ LR DNAD RL+ IG ++G + + R + ++ + +K Sbjct: 424 TKEPYRMMTSRAEYRLLLRQDNADLRLSKIGYEVGLLSKERYDHVVEKERQIEEEVARVK 483 Query: 480 SLVLTSKN------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVI 533 + + ++ S SI K + + P+ L I PD + S V Sbjct: 484 EINIGARKEVQALLESYGSIPLSNGIKL---VDLIRRPELDYDKLAPIDPDRPELSEEVR 540 Query: 534 ERLQIESSYAAYTGRQMIEAKEIK 557 E + I Y Y RQ + K+ K Sbjct: 541 EEVNIYIKYEGYLTRQEKQVKQFK 564 >gi|150020716|ref|YP_001306070.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Thermosipho melanesiensis BI429] gi|166224335|sp|A6LL84|MNMG_THEM4 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|149793237|gb|ABR30685.1| glucose inhibited division protein A [Thermosipho melanesiensis BI429] Length = 624 Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust. Identities = 265/619 (42%), Positives = 364/619 (58%), Gaps = 15/619 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+G GHAG EAA A+LG T ++T +G CNPAIGG KG +VREID L Sbjct: 12 FDVIVVGTGHAGIEAALAPARLGLRTLILTTNLDNVGWAPCNPAIGGPAKGIVVREIDVL 71 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + D I R+LN KGPAVR R Q D+ Y M+ ++ SQENL + G V Sbjct: 72 GGEMAKTTDETMINVRMLNTGKGPAVRALRAQIDKYAYSQMMKNKLQSQENLVLRFGLVE 131 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + + +V R V+LTTGTFLRG I IG+ + AGRMGD P+ L S Sbjct: 132 KILVKDGKVYGVVDSFGIDYRAKAVILTTGTFLRGKIFIGRDTMEAGRMGDLPAKGLSKS 191 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFS-FMTDKITNRQIECGITR 244 M F R KTGTP+R+ +I + K +Q D+ FS F K+ + C +T Sbjct: 192 LMDIGFKLSRFKTGTPSRVLKSSINFSKMIRQDTDDEPRAFSHFSEPKVLPKDHPCWLTH 251 Query: 245 TNLETHRIIMENIKHSAIYSGD--IKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 TN +TH+II + + +S +Y I+S GPRYCPSIEDK+V+F R+ HQ+F+EPEG N+ Sbjct: 252 TNEKTHKIIRDYLVYSPLYGKVKLIQSVGPRYCPSIEDKVVKFN-RDSHQVFVEPEGKNS 310 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 Y NG+ST+LP Q + +RTIPGLE V I+RP YAIEYDYI+P +L+ TLE+K I G Sbjct: 311 QEYYLNGLSTSLPYAAQIKMLRTIPGLENVVIVRPAYAIEYDYIDPLQLYQTLESKLIEG 370 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQINGT+GYEEAA QGLVAGIN+A K + R++SYIG++IDDLT+KGV E Sbjct: 371 LYFAGQINGTSGYEEAAGQGLVAGINAAMKILGEKPLILKRSESYIGILIDDLTTKGVDE 430 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL- 481 PYR+ TSRAEYR+ LR DNA RL G ++G I + ++ + LK++ Sbjct: 431 PYRLLTSRAEYRLLLRHDNAHIRLAKYGYRVGLIPKWFYEKVLNLEKNIKLQIERLKNVK 490 Query: 482 VLTSKNLSST-----SISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 V S ++ S K+ K Y L P+ S ++ + + R ++E++ Sbjct: 491 VPVSDRVNDILVKLGSTPLKEGTKL---YNLLKRPEISYNDIEELDSE-RITDKELLEQI 546 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I Y Y + + E K + E I K + +P LS E +EKL + P ++ QA Sbjct: 547 EIYIKYEGYIEKMLEEVKIFEEYESVDISK-INLDKVPNLSTEAREKLKKVMPRSIGQAM 605 Query: 597 KIEGMTPAALNLLLIYIKK 615 +I G+TPA + ++ YI+K Sbjct: 606 RIPGVTPADIANIISYIEK 624 >gi|193216990|ref|YP_002000232.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Mycoplasma arthritidis 158L3-1] gi|254811515|sp|B3PNC6|MNMG_MYCA5 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|193002313|gb|ACF07528.1| glucose-inhibited division protein A [Mycoplasma arthritidis 158L3-1] Length = 607 Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust. Identities = 251/614 (40%), Positives = 364/614 (59%), Gaps = 14/614 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +N++YD IVIGGGHAG EAA AK + ALIT + + + CNP+IGG KG + RE Sbjct: 1 MNKTYDAIVIGGGHAGIEAAYALAKRAFNVALITLNINRLAMLPCNPSIGGSAKGIITRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G+ G AD A IQ ++LN KGPAV R Q D+E Y + +I Q N+ +I+ Sbjct: 61 IDALGGMQGYFADLAMIQIKMLNTSKGPAVWSLRAQIDKEKYCQIILDDIKKQSNITLIE 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 EV +N +V ++N I VV+TTG ++ I G G G+ S+S Sbjct: 121 DEVVDLIVNENQCHGVVTKENGNISAKVVVMTTGVYMNSRILRGTDIKYDGPDGEKTSSS 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L + MK+ F+ RLKTGTP R+ +I + K EK+ D+ + FS ++ + Q C Sbjct: 181 LSKNLMKYGFEILRLKTGTPCRIYTDSIDFSKVEKEQLDKNELSFSSHSNVKLDEQTCCF 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T T +T II+ N+ S++YSG I GPRYCPS+EDKIVRF E+ H IF EPE Sbjct: 241 LTHTTAKTKEIILNNLDKSSLYSGIIIGIGPRYCPSVEDKIVRFQEKETHHIFFEPETAK 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 D++Y NG+ST++PE +Q Q I +IPGLEK + + GYAIEYD INP L+ +LE+K +S Sbjct: 301 GDIMYINGLSTSMPESVQDQMIASIPGLEKARVQKYGYAIEYDAINPLNLYKSLESKTLS 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 F AGQ NGT+GYEEAAAQGL+AGIN+A K +K+ + R+ +YIGV+IDD+ +KG Sbjct: 361 NFFSAGQPNGTSGYEEAAAQGLIAGINAANKLDKMPMMEIKRSSAYIGVLIDDIVTKGTN 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRM TSRAEYR+ LR DN D RL+ + I + + K + +Y + + ++ Sbjct: 421 EPYRMLTSRAEYRLLLRNDNVDERLSQYAFENKMISAQ---SYNKVLDKYKLINNEIQK- 476 Query: 482 VLTSKNLSSTSISFKQDGKTR--TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 L + +SS S K+ T + + L+ P +++ F L + + I+ Sbjct: 477 -LKDEYVSSNSELAKKYNVTSGVSKLKLLANPAVDPKDIL-----GNDFPYL--DEITIQ 528 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y +Q A+++ EK +P D DY+ + L+ E ++KL+ +KP + QAS+I Sbjct: 529 VRLFGYLKKQESAAEKMFRLEKLKLPIDLDYNLVENLATEARQKLNQIKPTTIGQASRIS 588 Query: 600 GMTPAALNLLLIYI 613 G+ PA + +L+ Y+ Sbjct: 589 GINPADIQMLMYYL 602 >gi|198274089|ref|ZP_03206621.1| hypothetical protein BACPLE_00226 [Bacteroides plebeius DSM 17135] gi|198273167|gb|EDY97436.1| hypothetical protein BACPLE_00226 [Bacteroides plebeius DSM 17135] Length = 623 Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust. Identities = 263/622 (42%), Positives = 364/622 (58%), Gaps = 15/622 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAGCEAAA AA LG+ T LIT + IG MSCNPA+GG+ KG +VREIDAL Sbjct: 5 YDVIVIGAGHAGCEAAAAAANLGSKTCLITMDMNKIGQMSCNPAVGGIAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ-ENLDVIQGEV 124 G MG V D IQFR+LN KGPA+ PR Q DR + A REIL NL + Q V Sbjct: 65 GGYMGLVTDKTAIQFRMLNRSKGPAMWSPRAQCDRGKFIWAW-REILENLPNLHIWQDTV 123 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ +V VVLT GTFL G++HIG + GR + S L Sbjct: 124 EELLVENGEVTGVVTCWGVTFHAKCVVLTAGTFLNGLMHIGHKMLAGGRCAEPASYHLTE 183 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S + GR+KTGTP R+DGK++ +D + Q + FSF+++ +Q++C Sbjct: 184 SITRHGITAGRMKTGTPVRIDGKSVHFDLMDTQDGENDFHRFSFISEPRHLKQLQCWTCF 243 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN E H + + + S +++G I+S GPRYCPSIE KIV F ++ HQ+FLEPEG T Sbjct: 244 TNEEVHDTLRKGLADSPLFNGQIQSIGPRYCPSIETKIVTFPDKPQHQLFLEPEGETTQE 303 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y NG S++LP +IQ + ++ IP + + + RPGYAIEYDY +P +L TLE+K + LF Sbjct: 304 LYLNGFSSSLPMDIQLEALKKIPCFKDLVVYRPGYAIEYDYFDPTQLKHTLESKVVKNLF 363 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ+NGTTGYEEA QG++AGIN+ + + R ++YIGV+IDDL +KGV EPY Sbjct: 364 FAGQVNGTTGYEEAGGQGIIAGINAHLNCHGGEPFVLGRDEAYIGVLIDDLVTKGVDEPY 423 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYRI LR D+AD RLT +LG + R + K E + + + + + + Sbjct: 424 RMFTSRAEYRILLRQDDADMRLTERAYQLGLVKADRYEILQKKRAEIDRIVNFVSTFSVK 483 Query: 485 SKNLSSTSISFKQDGKTRTA--YEFLSYPDFSIQNLFSICP---------DARKFSSLVI 533 + ++ T + +S P +I+N+ P + RK VI Sbjct: 484 ADKINDALEKLGTAPLTHGCKLVDLISRPQITIENIAPYIPAFQAALDKIEERK--EEVI 541 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E +I Y Y R+ A +I E I FDY++L +LS E ++KL + P L Sbjct: 542 EAAEIRIKYKGYIDRERTIADKIHRLESIRIKGKFDYANLQSLSTEARQKLVKIDPETLA 601 Query: 594 QASKIEGMTPAALNLLLIYIKK 615 QAS+I G++P+ +N+LL+ + + Sbjct: 602 QASRIPGVSPSDINVLLVLLGR 623 >gi|189460231|ref|ZP_03009016.1| hypothetical protein BACCOP_00868 [Bacteroides coprocola DSM 17136] gi|189433092|gb|EDV02077.1| hypothetical protein BACCOP_00868 [Bacteroides coprocola DSM 17136] Length = 623 Score = 449 bits (1154), Expect = e-124, Method: Compositional matrix adjust. Identities = 263/626 (42%), Positives = 362/626 (57%), Gaps = 23/626 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAGCEAAA AA LG+ T LIT + IG MSCNPA+GG+ KG +VREIDAL Sbjct: 5 YDVIVIGAGHAGCEAAAAAANLGSKTCLITMDMNKIGQMSCNPAVGGIAKGQIVREIDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ-ENLDVIQGEV 124 G MG V D IQFR+LN KGPA+ PR Q DR + A REIL NL + Q V Sbjct: 65 GGYMGLVTDRTAIQFRMLNRSKGPAMWSPRAQCDRGKFIWAW-REILENIPNLHIWQDTV 123 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ +V ++LT GTFL G++HIG + GR + S L Sbjct: 124 EELLVENGEVTGLVTCWGVTFHAKCIILTAGTFLNGLMHIGHKMLAGGRCAEPASYHLTE 183 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S + GR+KTGTP R+D +++ + E Q + FSF+++ +Q++C Sbjct: 184 SITRHGITAGRMKTGTPVRIDARSVDFSLMETQDGENDFHRFSFISEPRQLKQLQCWTCY 243 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN E H ++ + S +++G I+S GPRYCPSIE KIV F ++ HQ+FLEPEG T Sbjct: 244 TNEEVHEVLRSGLADSPLFNGQIQSIGPRYCPSIETKIVTFPDKPQHQLFLEPEGETTQE 303 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y NG S++LP +IQ ++ IP + RPGYAIEYDY +P +L TLE+K + LF Sbjct: 304 LYLNGFSSSLPMDIQFAALKKIPCFRNIVAYRPGYAIEYDYFDPTQLKHTLESKVVKNLF 363 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ+NGTTGYEEA QG++AGIN+ + + R ++YIGV+IDDL +KGV EPY Sbjct: 364 FAGQVNGTTGYEEAGGQGIIAGINAHINCHGGEPFVLGRDEAYIGVLIDDLVTKGVDEPY 423 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYRI LR D+AD RLT KLG + R R + +E L K+ + Sbjct: 424 RMFTSRAEYRILLRQDDADMRLTERSYKLGLASKERYDRLCQKREEIQRLVEFAKTYSIK 483 Query: 485 SKNLSSTSISFKQDGKTRTAY-----EFLSYPDFSIQNLFSICPDARKFSSLV------- 532 + ++ + + G R + E LS P +I+N I P F + + Sbjct: 484 ADKIND---ALEGLGTARLTHGCKLIELLSRPQITIEN---IAPHVPSFQAALDKVTDRK 537 Query: 533 ---IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 IE ++ Y Y R+ + A +I E I FDY++L +LS E ++KL + P Sbjct: 538 EETIEAAEVLIKYQGYIDRERMIADKIHRLEAIRIKGKFDYANLNSLSTEARQKLIKIDP 597 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKK 615 L QAS+I G++P+ +N+LL+ + + Sbjct: 598 ETLAQASRIPGISPSDINVLLVLLGR 623 >gi|262166773|ref|ZP_06034510.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio mimicus VM223] gi|262026489|gb|EEY45157.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio mimicus VM223] Length = 566 Score = 449 bits (1154), Expect = e-124, Method: Compositional matrix adjust. Identities = 246/562 (43%), Positives = 334/562 (59%), Gaps = 15/562 (2%) Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 + GLM + D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Q V Sbjct: 1 MGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRSVLENTPNLTLFQQAV 60 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + I +V Q VVLT GTFL G IHIG GR GD PS +L + Sbjct: 61 DDVIVENDHIRGVVTQMGLKFHAKAVVLTVGTFLGGKIHIGLENFAGGRAGDPPSIALAH 120 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 + F RLKTGTP R+D ++ + E Q D FSFM + + RQI C IT Sbjct: 121 RLRELPFRVDRLKTGTPPRIDANSVDFSVLEAQHGDNPTPVFSFMGKREHHPRQIPCYIT 180 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEGL T Sbjct: 181 HTNERTHDVIRANLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEGLTTT 240 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK I GL Sbjct: 241 ELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKFIHGL 300 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G EP Sbjct: 301 FFAGQINGTTGYEEAAAQGLMAGLNASLYSQDKEGWSPRRDQAYMGVLIDDLSTMGTKEP 360 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT +LG + + R RF + I R L+ + Sbjct: 361 YRMFTSRAEYRLLLREDNADLRLTEKARELGLVDDERWARFNQKIDNMAKERQRLQETWM 420 Query: 484 TSKN--------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIE 534 + L T +S + G+ + L P+ + + L ++ S E Sbjct: 421 NPNSVGVEQLNALLKTPMSREASGE-----DLLRRPEMTYELLTTLPAFTPALEDSEAAE 475 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E ++ E +P D DY + LSNE+ KLS KP + Sbjct: 476 QVEIQVKYDGYIQRQQDEIEKSLRHEHTKLPVDLDYKQVKGLSNEVVLKLSTTKPETIGI 535 Query: 595 ASKIEGMTPAALNLLLIYIKKN 616 AS+I G+TPAA+++LL+++KK+ Sbjct: 536 ASRISGITPAAISILLVHLKKH 557 >gi|269791623|ref|YP_003316527.1| glucose inhibited division protein A [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099258|gb|ACZ18245.1| glucose inhibited division protein A [Thermanaerovibrio acidaminovorans DSM 6589] Length = 622 Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust. Identities = 240/611 (39%), Positives = 351/611 (57%), Gaps = 21/611 (3%) Query: 15 HAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVAD 74 HAGCEAA +A++G T L+ M+CNP+IGG KGHL RE+DA+ G + AD Sbjct: 17 HAGCEAALASARMGVRTLLLNMNLENTALMACNPSIGGPAKGHLTREVDAMGGFQAKAAD 76 Query: 75 AAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNII 134 + + R LN KGPAVR R Q D + A + ++ SQ NL V+Q E E I Sbjct: 77 RSALHVRWLNTSKGPAVRTLRIQCDMWEFHRAYRLQVESQPNLHVLQAEAVDLWVEDRRI 136 Query: 135 SSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTG 194 + ++ C V+L+ GT+ ++IG + AG MG+ S L S M G Sbjct: 137 RGVRTSLGQVVECLAVILSPGTYSGARVYIGLDRFQAGPMGNLGSYRLAESLMSLGLKLG 196 Query: 195 RLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTNLETHRIIM 254 RLKTGTP RL +I WD Q +E S ++ CG TRTNLETHRII+ Sbjct: 197 RLKTGTPPRLHRDSIDWDSIPHQEGEEEPCAMSVFSEPRVVSGFFCGCTRTNLETHRIII 256 Query: 255 ENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTAL 314 E + S +Y+G I+ GPRYCPSIEDK+VRF R+ H +FLEP G +++ VY ST+L Sbjct: 257 EALDRSPLYTGLIEGVGPRYCPSIEDKVVRFPHRDSHPVFLEPVGKDSNEVYVQNFSTSL 316 Query: 315 PEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTG 374 P ++Q + +RT+PG E I++PGYAIEY Y +P++L P LE K ++GLF+AGQ+NGT+G Sbjct: 317 PYDVQVRMVRTLPGCEGARILKPGYAIEYWYSDPRQLEPWLEVKGLAGLFMAGQVNGTSG 376 Query: 375 YEEAAAQGLVAGINSARKSNKL-DCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEY 433 YEEAA+QGLVAG+N A ++ + + R ++Y+GV+IDDL +KG EPYRM TSR E+ Sbjct: 377 YEEAASQGLVAGVNGALRAMGVNEPFVLGRHEAYVGVLIDDLVTKGTDEPYRMLTSRCEH 436 Query: 434 RISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS-------K 486 R+ LR DNAD RL+ +LG + + +++ LR L+ VL + Sbjct: 437 RLRLRHDNADRRLSFRARELGLLDDLSWGVVMSRMEDQRKLREALEGAVLKPDFVNPRLR 496 Query: 487 NLSSTSISFKQDGKTRTAYEFLSYPDF---SIQNLFSICPDARKFSSLVIERLQIESSYA 543 L S+ + + A E L P+ ++++L I + + S +++E Y Sbjct: 497 ELGSSPVE-----EPVRALELLRRPEVTWETLRDLTRIGGPSESWRS-----VEVEEKYR 546 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y R+ + + ++ IP+ FD+ S+ L E EKL+ ++P L QAS+I G+TP Sbjct: 547 GYVAREDRRVERMSRMDQVRIPEGFDFGSVRGLLRESLEKLNRVRPRTLGQASRISGVTP 606 Query: 604 AALNLLLIYIK 614 A + L+ ++++ Sbjct: 607 ADVELIWMHLE 617 >gi|218134367|ref|ZP_03463171.1| hypothetical protein BACPEC_02261 [Bacteroides pectinophilus ATCC 43243] gi|217989752|gb|EEC55763.1| hypothetical protein BACPEC_02261 [Bacteroides pectinophilus ATCC 43243] Length = 587 Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust. Identities = 243/578 (42%), Positives = 347/578 (60%), Gaps = 11/578 (1%) Query: 44 MSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELY 103 M CNP IGG KGHLVREIDAL G MG+ DA IQ ++LN KGPAV R QAD++ Y Sbjct: 1 MPCNPNIGGSSKGHLVREIDALGGEMGKNIDATFIQSKMLNASKGPAVHSLRAQADKQDY 60 Query: 104 RLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIH 163 M+ + + E+L + Q EV+ + + ++ V+L TGT+L+ Sbjct: 61 SRRMRMVMENTEHLHIRQAEVSELIVNDGRVQGVKTYSGAVYHAKAVILCTGTYLKARCI 120 Query: 164 IGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERL 223 G + G G +N L S + R KTGTPAR+D ++I + K +Q D+++ Sbjct: 121 YGDVSNYTGPNGLQAANHLTESLIANGISVRRFKTGTPARVDKRSIDFSKMAEQKGDDKI 180 Query: 224 IPFSFMT--DKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDK 281 +PFSF T D I Q+ C +T TN +TH II N+ S +YSG I GPRYCPSIEDK Sbjct: 181 VPFSFTTNPDDIQKEQVSCWLTYTNEKTHEIIRANLDRSPLYSGVIHGTGPRYCPSIEDK 240 Query: 282 IVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAI 341 +VRF ++ HQ+F+EPEG T+ +Y G+S++LPE++Q++ RT+PGLE V I+R YAI Sbjct: 241 VVRFADKERHQVFIEPEGNYTNEMYLGGMSSSLPEDVQYEMYRTVPGLENVRIVRNAYAI 300 Query: 342 EYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICF 401 EYD I+P +L +LE K I GLF GQ NG++GYEEAA+QG++AGIN+A K + Sbjct: 301 EYDCIDPVQLKLSLEFKNIEGLFAGGQFNGSSGYEEAASQGIIAGINAAMKVLGKSPLIL 360 Query: 402 SRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQ 461 R++SYIGV+IDDL +K EPYRM TSRAEYR+ LR DNAD RLT G ++G I E+R Sbjct: 361 KRSESYIGVLIDDLVTKENTEPYRMMTSRAEYRLLLRQDNADLRLTHYGYEIGLIDEKRM 420 Query: 462 KRFAKYIQEY--NFLRSLLKSLVLTSKN----LSSTSISFKQDGKTRTAYEFLSYPDFSI 515 + KY ++ + L + V TS+N L + + +G T + + P+ S Sbjct: 421 N-YVKYKEKAINEEIERLNNTFVGTSQNVQELLERRNSTLLTNGVTLA--DLVRRPELSY 477 Query: 516 QNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPA 575 ++ I D + S + E++ I YA Y RQ + + K E + IP D DY ++ Sbjct: 478 DDIEPIDKDRPELSEDIREQVNINIKYAGYIERQRRQVEHFKKLENKKIPSDIDYKAISG 537 Query: 576 LSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYI 613 L +E +KL +P N+ QA +I G++PA +++LL+Y+ Sbjct: 538 LRSEAVQKLDKFRPLNVGQAQRISGVSPADISVLLVYM 575 >gi|332827805|gb|EGK00540.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Dysgonomonas gadei ATCC BAA-286] Length = 624 Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust. Identities = 261/627 (41%), Positives = 368/627 (58%), Gaps = 16/627 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +N YDVIV+G GHAGCEAAA AA +G+ T LIT + I MSCNPA+GG+ KG +VRE Sbjct: 1 MNFKYDVIVVGAGHAGCEAAAAAANMGSKTLLITMDMNKIAQMSCNPAVGGIAKGQIVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G MG V D IQFR+LN KGPA+ PR Q+DR + L + I + +NL V Q Sbjct: 61 IDALGGQMGIVTDTTAIQFRMLNKSKGPAMWSPRAQSDRAQFILKWRGIIENTDNLFVWQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E + + +VVLT GTFL G++HIGK ++ GR+ + S Sbjct: 121 DTVTSLIIENKTATGVKTAMGVNFSAKSVVLTNGTFLNGLMHIGKTQLGGGRVSEPASFG 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNRQIEC 240 + +F F T R+KTGTPAR+DG+++ + E+Q D+ FS++ T +Q+ C Sbjct: 181 ITEQLREFGFTTDRMKTGTPARIDGRSVDFSLMEEQKGDDDFHKFSYLDFAPRTLKQLSC 240 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN E H + + + S +Y+G IKS GPRYCPSIE K+V F E+ HQ+FLEPEG Sbjct: 241 WITYTNEEVHSTLRDRLDDSPLYNGQIKSIGPRYCPSIETKVVTFAEKTSHQLFLEPEGE 300 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 +T Y NG S++LP Q + ++ IP ++I RPGYAIEYD+ +P +L TLETK I Sbjct: 301 STQEYYLNGFSSSLPLHTQIEALQRIPAFRNIHIYRPGYAIEYDFFDPTQLKHTLETKLI 360 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 LF AGQINGTTGYEEA QGL+AGIN+ K+ D R ++YIGV+IDDL +KGV Sbjct: 361 DNLFFAGQINGTTGYEEAGGQGLIAGINAHIKTQGGDEFILKRDEAYIGVLIDDLVTKGV 420 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYRI LR D+AD RLT G +G R + +E N + + Sbjct: 421 DEPYRMFTSRAEYRILLRQDDADARLTEKGYNMGLAKRERIDLLNQKKEEMNRIIDFTAN 480 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAY-----EFLSYPDFSIQNLFSICPDAR-------KF 528 L + ++ ++ G + + + ++ P SI ++ + P + Sbjct: 481 YSLKPEYINE---GLEKLGTSPLKHGLKLKDIITRPQVSIDSIAELVPAFKAELDKIPNR 537 Query: 529 SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 + E +I Y Y R+ + A +I E I F+Y ++ +LS E ++KL+ + Sbjct: 538 KEEIKEACEIIIKYDGYIKREQLIADKISRLENIQIKGKFNYEAILSLSTEARQKLAKID 597 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIKK 615 P + QAS+I G++P +++LL+ + + Sbjct: 598 PETIAQASRIPGVSPNDISILLVILGR 624 >gi|303280251|ref|XP_003059418.1| predicted protein [Micromonas pusilla CCMP1545] gi|226459254|gb|EEH56550.1| predicted protein [Micromonas pusilla CCMP1545] Length = 663 Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust. Identities = 293/653 (44%), Positives = 390/653 (59%), Gaps = 59/653 (9%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTS-TIGSMSCNPAIGGLGKGHLVREIDA 64 YDV+VIGGGHAG EAAA AA+ GAS ALIT + TIG MSCNP+IGGL KG LVREIDA Sbjct: 1 YDVVVIGGGHAGTEAAAAAARRGASVALITPSPAKTIGEMSCNPSIGGLAKGTLVREIDA 60 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMG ADAAGIQFRVLN KGPAVRGPR Q DR Y+ +Q + + + ++ V Sbjct: 61 LDGLMGVAADAAGIQFRVLNASKGPAVRGPRAQMDRTAYKNEIQSLLGNVGGVTIVDAAV 120 Query: 125 AGFNTEKNIISSIVMQ-----DNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRM----- 174 A T +++ ++ IR + VV+ TGTFL+GV+H+G IPAGR+ Sbjct: 121 ADLITPAPRALGVILDRGGGGASTRIRSAAVVVATGTFLKGVLHVGSETIPAGRLPTAVT 180 Query: 175 ------GDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSF 228 + +N L + F GR+KTGTP RLDG +I W E+Q DE PF+F Sbjct: 181 EGPDKSASAGANLLADRLYGMGFKMGRMKTGTPPRLDGASIDWGGLEEQPGDEPPRPFAF 240 Query: 229 MTDKI--------TNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIED 280 + T RQ+ C TRT +T + + PRYCPS+E Sbjct: 241 HNGSLASVVPWRPTLRQVSCYATRTTADTEAFVASKPRSKREAGAPGVGAAPRYCPSLES 300 Query: 281 KIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYA 340 K RF R H ++LEPEGL+TDVVYPNG+S +L Q + +RTIPGLE V ++RPGY Sbjct: 301 KFTRFPNRT-HLVWLEPEGLDTDVVYPNGLSNSLEPSDQVEMLRTIPGLENVKMLRPGYG 359 Query: 341 IEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNK-LDCI 399 +EYDY++P+EL TLET+++SGLFLAGQINGTTGYEEAAAQGL+AG N+A + + L I Sbjct: 360 VEYDYVDPRELRATLETRRVSGLFLAGQINGTTGYEEAAAQGLLAGANAAGAAREDLGAI 419 Query: 400 ---CFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCI 456 SR SY+GV++DDLT +G EPYRMF+SR E+R+S+RPDNAD RLT G++ G + Sbjct: 420 PNEITSRGGSYLGVLVDDLTRRGTSEPYRMFSSRVEHRLSIRPDNADLRLTSAGVRCGLV 479 Query: 457 GERRQKRFA----------KYIQEYNFLRSLLKSLVLTSK-----NLSSTSISFKQDGKT 501 GE R + A + +Q +L +S+ L ++ N S S+ T Sbjct: 480 GEARGRAAATRAALVTDALEALQSAKMSPTLWRSMGLRAEASEVCNASDASV-------T 532 Query: 502 RTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEK 561 + LS ++Q + S P A +E E YA Y +Q + +++K EE Sbjct: 533 DATFTALSDASATLQRVLSNDPSA-------LESAATECYYAPYLAKQRRDVEDLKSEEA 585 Query: 562 RLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIK 614 IP + DY+S+ +LS E EKL+ KP N+ A++I G+TPAAL L+ + + Sbjct: 586 TTIPAELDYASIGSLSAEDVEKLNEAKPANIAAAARISGVTPAALVSLIRHAR 638 >gi|330040419|ref|XP_003239903.1| glucose inhibited division protein A [Cryptomonas paramecium] gi|327206829|gb|AEA39005.1| glucose inhibited division protein A [Cryptomonas paramecium] Length = 647 Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust. Identities = 252/619 (40%), Positives = 359/619 (57%), Gaps = 11/619 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVI+IGGGHAGCEAA G ST L T I CNP+IGG K LV EID Sbjct: 31 QEYDVIIIGGGHAGCEAALSCCSQGVSTLLFTLNLDKIAWQPCNPSIGGPAKSILVHEID 90 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G MG++ D + I ++LN KGPAV R Q D+ Y M++ + NL + + Sbjct: 91 ALGGWMGKITDRSYIHKKILNTSKGPAVWSLRAQTDKREYSEEMKKVLNETSNLTISEEM 150 Query: 124 VAGF-NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 V+ T++ I + + C ++V+TTGTF++G I +G K AGR+G+ S +L Sbjct: 151 VSDIILTKEEKIKGVKTFFGGLFECKSIVITTGTFMKGTIWVGSKKFAAGRIGEMASFAL 210 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECG 241 +S K FD RLKTGTP R+D + I + EKQ +D FSF + +R + C Sbjct: 211 SDSLKKLKFDINRLKTGTPPRIDSRYINFKVMEKQNSDIMENWFSFDKSEWNSRHTLSCY 270 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 I+ T LET +I N+ S Y G ++S GPRYCPSIEDK+VRF ++ HQ+FLEPEG N Sbjct: 271 ISHTTLETLSVIRSNLHLSPKYGGFMRSTGPRYCPSIEDKVVRFDQKKEHQVFLEPEGKN 330 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ +Y G+ST LPE +Q I+TIPGLE IIRP Y+++YDYI +L TL + IS Sbjct: 331 TNEIYIQGMSTGLPENLQKNIIKTIPGLEYSKIIRPAYSVDYDYIPATQLDKTLMS-DIS 389 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQI GTTGYEEAAAQG VAG+N+A S + + R S+IG+++DDL +K + Sbjct: 390 GLFFAGQICGTTGYEEAAAQGWVAGLNAALYSLQNSLLSLRRESSFIGLLVDDLCTKKLK 449 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK-S 480 EPYR+ TS++E+R+ LR DNAD RLTP+G K G + ER+ K F + N + +++ Sbjct: 450 EPYRVLTSKSEHRLLLRGDNADFRLTPLGKKYGTVSERKWKSFEHKYE--NIQKEIIRVD 507 Query: 481 LVLTSKNLSSTSISFKQDGKTRTA-----YEFLSYPDFSIQNLFSICPDARKFSSLVIER 535 L KNL ++ T A L P S + L + ++ ++ Sbjct: 508 NALIEKNLQQRLTFVEKQTTTSCAKNCCVLNLLDQPFSSYKTLENFRLHNFNLNASEKKQ 567 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 L+IE Y+ Y RQ + ++ I K+ ++ + +S E +EKL+ +P L +A Sbjct: 568 LEIEIKYSVYIERQETQINALEEALDTKIQKNLNFMKIFQISKEAREKLAKKRPSTLREA 627 Query: 596 SKIEGMTPAALNLLLIYIK 614 ++ G++ + LL+Y+K Sbjct: 628 CQLGGVSLPDIQTLLVYVK 646 >gi|255074421|ref|XP_002500885.1| predicted protein [Micromonas sp. RCC299] gi|226516148|gb|ACO62143.1| predicted protein [Micromonas sp. RCC299] Length = 761 Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust. Identities = 258/621 (41%), Positives = 361/621 (58%), Gaps = 16/621 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+G GHAGCEAA A++ GA T L+T I CNPA+GG K LV E+DAL Sbjct: 102 FDVIVVGAGHAGCEAALAASRRGARTLLLTLSLDRIAWQPCNPAVGGPAKSQLVHEVDAL 161 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE-- 123 G +G++AD +Q RVLN +GPAV R Q D+ Y M+ + Q NL + +G Sbjct: 162 GGEIGKMADKCYLQKRVLNASRGPAVWALRAQTDKWEYSREMRLRLERQPNLMIREGMAT 221 Query: 124 --VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 + G N E + + + R VVLTTGTF+ G I +G+ + AGR G++PS Sbjct: 222 DVLVGSNDEVAGVRTFFGME---FRAPAVVLTTGTFMSGQIWVGRKTLAAGRAGEAPSEG 278 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSF-MTDKITNRQIEC 240 L S F+T RLKTGTPAR+D ++I + E Q DE FSF + Q+ C Sbjct: 279 LTESLCDLGFETDRLKTGTPARVDSRSIDYSLLEAQPGDEDERWFSFDPRAHVAREQMAC 338 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +TRT TH++I +N+ + Y G + + GPRYCPSIEDKIVRF ++ HQIFLEPEG Sbjct: 339 HLTRTTAATHQLIRDNLHETPTYGGWVGAKGPRYCPSIEDKIVRFADKESHQIFLEPEGR 398 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + VY G ST LPE +Q +RT+PGLEKVN++RP YA+EYD++ + TLETKKI Sbjct: 399 SCPEVYVQGFSTGLPERLQLALLRTLPGLEKVNMLRPAYAVEYDFLPAYQCDNTLETKKI 458 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF +GQINGTTGYEEAAAQGL+AG N+A + + R SY+G +IDDL +K + Sbjct: 459 RGLFFSGQINGTTGYEEAAAQGLLAGANAAAVALDGAKLVLPREGSYLGTLIDDLCTKDL 518 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRM TSR+EYR+ LR DNAD RLTPIG + G I + R F + LK+ Sbjct: 519 REPYRMLTSRSEYRLVLRSDNADQRLTPIGRECGLIDDERWGMFTDKMHAVEDELERLKN 578 Query: 481 LVLTSKNLSSTSI-------SFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVI 533 + S + +I + K ++ T E L P+ + + Sbjct: 579 TRVKSDSEVVQAILNAGAGGAKKPSRQSFTLEELLRRPEVDTA-MLDGFGLGGGLTRWDA 637 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E ++++ Y + RQ + ++ + + IP+ DY ++ L E +EKL+ + P + Sbjct: 638 EAVEVKVKYEGFIKRQEGQVAKVAGKMNKKIPEGIDYGAITTLRMEAREKLAKMTPRTVG 697 Query: 594 QASKIEGMTPAALNLLLIYIK 614 QAS+I G+TPA ++ LL++++ Sbjct: 698 QASRIGGVTPADISSLLVHLE 718 >gi|217077029|ref|YP_002334745.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Thermosipho africanus TCF52B] gi|217036882|gb|ACJ75404.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Thermosipho africanus TCF52B] Length = 624 Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust. Identities = 260/623 (41%), Positives = 375/623 (60%), Gaps = 17/623 (2%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 ++++DVIV+G GHAG EAA A+LG T L+T +G CNPAIGG KG +VREI Sbjct: 9 DKNFDVIVVGAGHAGIEAALSTARLGLRTLLLTTNLDNVGWAPCNPAIGGPAKGIVVREI 68 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G M + D I R+LN KGPAVR R Q D+ Y M+ ++ +QENL + G Sbjct: 69 DALGGEMAKTTDETMINVRMLNTGKGPAVRALRAQIDKFEYSKLMKNKLQTQENLILRYG 128 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 V E + +V V+LTTGTFLRG I IG+ + AGRMGD P+ L Sbjct: 129 VVEKVLVESGKVKGVVDSFGIDYYAKAVILTTGTFLRGKIFIGRDTMEAGRMGDLPAKGL 188 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECG 241 S ++ F R KTGTPAR+ +I + K +Q D+ FS+ ++ K+ + C Sbjct: 189 SKSLLELGFKLSRFKTGTPARVLKSSIDFSKMIRQDTDDEPRAFSYFSEPKVLPKDHPCW 248 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIK---SYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 +T TN +TH+II + + +S +Y GD+K S GPRYCPSIEDK+V+F R+ HQ+F+EPE Sbjct: 249 LTHTNQQTHKIIRDYLVYSPLY-GDVKLIQSVGPRYCPSIEDKVVKFN-RDSHQVFVEPE 306 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 G N+ Y NG+ST+LP Q + +RT+PGLE V I+RP YAIEYDYI+P +LF TLE+K Sbjct: 307 GRNSQEFYLNGLSTSLPYAAQVKMLRTVPGLENVVIVRPAYAIEYDYIDPTQLFQTLESK 366 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 + GL+ AGQINGT+GYEEAA QGL+AGIN+A K + + R++SYIG++IDDLT+K Sbjct: 367 IVEGLYFAGQINGTSGYEEAAGQGLIAGINAAMKILGEEPLILKRSESYIGILIDDLTTK 426 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 GV EPYR+ TSRAEYR+ LR DNA RL G ++G I + ++ ++ + L Sbjct: 427 GVDEPYRLLTSRAEYRLLLRHDNAHLRLAKYGYRVGLIPKWFYEKVINLEKQIQYQIERL 486 Query: 479 KSLVLTSKNLSST------SISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV 532 K++ + + ++ + S K+ K Y L P+ ++ + + L Sbjct: 487 KNVKVPASDIVNDRLVELGSTPLKEGTKL---YNLLKRPEIEYGHVKEFDSEPIEDREL- 542 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 +E+++I Y Y + + + K + E I K ++ +P LS E +EKL + P ++ Sbjct: 543 LEQIEILIKYEGYIEKMLEDVKVFEEYESVDISK-INFDKVPNLSTEAREKLKKILPRSI 601 Query: 593 LQASKIEGMTPAALNLLLIYIKK 615 QA +I G+TP+ + ++ YI+K Sbjct: 602 GQAMRIPGVTPSDIANIISYIEK 624 >gi|260890748|ref|ZP_05902011.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Leptotrichia hofstadii F0254] gi|260859301|gb|EEX73801.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Leptotrichia hofstadii F0254] Length = 488 Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust. Identities = 226/484 (46%), Positives = 315/484 (65%), Gaps = 22/484 (4%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R+YDVIV+G GHAG EAA +A+LG +TA+ T IG MSCNP++GG K HL +E+D Sbjct: 2 RNYDVIVVGAGHAGIEAALASARLGLNTAIFTITLDNIGVMSCNPSVGGPAKSHLAKEVD 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG- 122 AL G +GR D + +Q R+LN KKGPAVR R QADR++Y M++ I +Q+NLD +Q Sbjct: 62 ALGGEIGRNMDKSFVQMRILNTKKGPAVRSLRAQADRKIYAREMKKTIENQQNLDTVQDI 121 Query: 123 -------EVAGFNTE----KNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPA 171 EV F + + +I I + VVL TGTFLRG+++IG ++ Sbjct: 122 VTELIVEEVEIFEDDSRRIEKVIKGIRTKTGMEFFAKAVVLATGTFLRGLLYIGDKRVKG 181 Query: 172 GRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-- 229 GRMG+ ++ L +S F R KTGTP RLD +T+ +K E+Q IP F Sbjct: 182 GRMGELSADDLTDSLKSLGFKMDRFKTGTPPRLDIRTLNLEKLEEQPGITG-IPLKFSMR 240 Query: 230 ---TDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFG 286 ++ + Q+ C +TRTN TH+II++N+ + +Y+G I S GPRYCPSIEDK+V+F Sbjct: 241 TPNSEVLEKPQLSCYLTRTNETTHKIILDNLDKAPMYNGSISSTGPRYCPSIEDKVVKFN 300 Query: 287 ERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI 346 +++ H +FLEPEG +T VY +G+ST+ P +Q + + TI GLE +I+R GYA+EYD + Sbjct: 301 DKDSHHLFLEPEGFDTAEVYISGLSTSYPASLQQKIVNTIDGLENAHIMRYGYAVEYDIV 360 Query: 347 NPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDS 406 +P EL TLET+K+ GL+LAGQ+NGT+GYEEAAAQG++AGIN+A K + R S Sbjct: 361 DPSELDYTLETRKVKGLYLAGQLNGTSGYEEAAAQGIIAGINAALKIRGEEPFILDRESS 420 Query: 407 YIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAK 466 YIG MIDDL +K + EPYRMFT+R+E+R+ LR DNAD RL+ K+G + K++ Sbjct: 421 YIGTMIDDLINKELFEPYRMFTARSEFRLILREDNADIRLSEKAYKIGLL----DKKYYD 476 Query: 467 YIQE 470 +QE Sbjct: 477 IVQE 480 >gi|41058591|gb|AAR99282.1| glucose-inhibited division protein A [Candidatus Blochmannia floridanus] Length = 578 Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust. Identities = 247/567 (43%), Positives = 350/567 (61%), Gaps = 7/567 (1%) Query: 56 GHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQE 115 GHLV+E+DA+ G+M + D +GIQFR+LN +KG AV+ R QAD+ LYR A++ + Q+ Sbjct: 1 GHLVKEVDAMGGIMAKAIDQSGIQFRILNTRKGAAVKSTRAQADKILYRQAIRHALEIQD 60 Query: 116 NLDVIQGEVAGFNTEKNIISSIVMQDNSM-IRCSTVVLTTGTFLRGVIHIGKLKIPAGRM 174 +L ++Q V ++N + +V+ ++ I +VVLTTGTFL G IHIG GR Sbjct: 61 SLFILQASVEDLIIKQNKVIGVVIPKIAIEIYAKSVVLTTGTFLNGKIHIGMNNFKGGRS 120 Query: 175 GD-SPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI 233 GD S+SL F RLKTGT R+ K + +D Q +D L FSF Sbjct: 121 GDLESSSSLSQKLRDLSFRINRLKTGTSPRIHAKGVNFDCMSVQNSDSPLPVFSFTGSLE 180 Query: 234 TN-RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQ 292 + +QI C T TN +TH II N+ S +YSG I PRYCPSIEDK+VRF +R+ HQ Sbjct: 181 QHPKQIPCYSTYTNKKTHDIIRLNLNQSPVYSGLINGISPRYCPSIEDKVVRFSDRDAHQ 240 Query: 293 IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF 352 +FLEPEGL T +Y NG+ST+LP IQ + I +I GLE +IIRPGYAIEYD+ +P++L Sbjct: 241 VFLEPEGLTTSEIYVNGVSTSLPSNIQTEIIHSIFGLENAHIIRPGYAIEYDFFDPRDLK 300 Query: 353 PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMI 412 TLE+K ISGLFL+GQINGTTGYEEAAAQG++AGIN+AR R +Y+GV++ Sbjct: 301 LTLESKFISGLFLSGQINGTTGYEEAAAQGILAGINAARYVQNKPGWYPRRDQAYLGVLV 360 Query: 413 DDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYN 472 DDL + G EPYRMFTSR+EYR+SLR DNAD RLT + + G I + R + F + Sbjct: 361 DDLCTYGTKEPYRMFTSRSEYRLSLREDNADLRLTTVAREFGLIDDNRWRIFCLKQENIE 420 Query: 473 FLRSLLKSLVL--TSKNLSSTSISFKQDGKTRTAYE-FLSYPDFSIQNLFSICP-DARKF 528 R L++ + S+++ + K + + E L P+ + L + + K Sbjct: 421 KERQRLRNTYIFPYSEDIVQLNRFLNSPIKNKVSGEDLLKRPEMNYVKLMQLNTFQSVKL 480 Query: 529 SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 V E+++I+ Y+ Y RQ E K+ + E L+P D +Y + LS E+ +K + + Sbjct: 481 DYQVFEQVEIQIKYSGYLLRQQEEIKKYLYYENTLLPIDINYHDIAGLSKEVIDKFNDCR 540 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIKK 615 P+++ QAS+I G+TPAA++ +LI++KK Sbjct: 541 PYSIGQASRIPGVTPAAISNVLIWLKK 567 >gi|293363789|ref|ZP_06610530.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Mycoplasma alligatoris A21JP2] gi|292552655|gb|EFF41424.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Mycoplasma alligatoris A21JP2] Length = 612 Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust. Identities = 257/627 (40%), Positives = 364/627 (58%), Gaps = 30/627 (4%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +++ I++GGGHAG EAA A G +AL + +G M CNP+IGG KG + REIDA Sbjct: 6 NFEAIIVGGGHAGIEAAFALAHKGHKSALFSFDLKNLGMMPCNPSIGGPAKGIITREIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G+ G AD A IQ ++LN KGPAVR R Q D+E Y + ++ ENL +++ V Sbjct: 66 LGGMQGYFADLAMIQIKMLNESKGPAVRAIRAQIDKEKYSQIILKKAKETENLTLVEKSV 125 Query: 125 AGFNTEKN-IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 T++N + I +D VV+TTGT++ I G +G G +N L Sbjct: 126 VEILTDQNNQVIGIKTEDGEEYFAKVVVITTGTYMSSRIIRGSEITYSGPDGQKTTNLLS 185 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 S K FD RLKTGTP R+ +I + K EK+ D+ + FS + QI C +T Sbjct: 186 ESLKKIGFDLQRLKTGTPPRVFADSIDFSKVEKEKLDDSALCFSSRSGVKLPNQISCYLT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH+II +NI S +YSG I+ GPRYCPSIEDKI+RF ++ HQIF EPE + Sbjct: 246 YTNEKTHKIIEKNISLSGMYSGLIEGVGPRYCPSIEDKIMRFRDKTRHQIFFEPETNDGK 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 ++Y NG S+++P E+Q + I+TIPGLE + + YAIEYD +NP +L PTLETKK+ L Sbjct: 306 IIYVNGFSSSMPIEVQKEMIKTIPGLENAKVQKWAYAIEYDALNPLDLLPTLETKKVKNL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGT+GYEEAAAQGL+AGIN+A + I R ++YIGV+IDDL +KG EP Sbjct: 366 FSAGQINGTSGYEEAAAQGLIAGINAALYLENKEQIILKRHEAYIGVLIDDLVTKGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRM TSRAEYR+ LR DN+D RL+ G +G I + +Y+F+ + Sbjct: 426 YRMLTSRAEYRLLLRNDNSDLRLSKYGYDIGLIKK----------SDYDFIVDKYNKIEQ 475 Query: 484 TSKNLSSTSISFKQDGKTR-------TAYEFLSYPDFSIQNLFSICPDARKFSSLVIE-R 535 + L++T IS K + + + +S P+ + D + LV+ R Sbjct: 476 KIEELNNTFISSKDPLAIKYGITNGVSLIKVISRPEVDASDFLG---DFEFKNDLVVAVR 532 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 L Y +Q ++A ++ E IPKD D++ +P ++ E K+KL + P + QA Sbjct: 533 LD------GYIKKQKMDAAKMLRLENLKIPKDVDFNLIPNIATEAKQKLIKINPLTIGQA 586 Query: 596 SKIEGMTPAALNLLLIYIKKNTVKLNE 622 S+I G+ PA + ++L Y+ NT K +E Sbjct: 587 SRISGINPADIQMILFYL--NTRKKSE 611 >gi|28190319|gb|AAO33052.1| glucose-inhibited division protein [Buchnera aphidicola] Length = 532 Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust. Identities = 245/535 (45%), Positives = 343/535 (64%), Gaps = 11/535 (2%) Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M R D +GIQFR+LN +KGPAVR R QADR++Y ++ + +Q+ L +++ Sbjct: 1 IDALGGFMARAIDKSGIQFRILNSRKGPAVRSTRAQADRKIYSKTIKNFLQNQDKLSIVE 60 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 GEV E + +++ + +VVLT GTFL G I+IG + GR+GD S Sbjct: 61 GEVKDLIVENYSVKGVIIHNEIKFFSRSVVLTVGTFLGGKIYIGLDSVSGGRIGDHASID 120 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIEC 240 L + + + RLKTGTP RLD +TI + + E Q++D L FSFM + + +Q+ C Sbjct: 121 LASRLRELPVNVSRLKTGTPPRLDYRTINFKELECQYSDNPLPIFSFMGTILEHPKQVPC 180 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN TH II +N+ SAIYSG +K GPRYCPSIEDK++RF +++ HQIFLEPEGL Sbjct: 181 HITYTNEITHSIIRKNLHSSAIYSGILKGIGPRYCPSIEDKVIRFSKKSQHQIFLEPEGL 240 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + +YPNGIST+LPE +Q + I++I GLEK IIRPGYA+EYDY++P+ L TLE+K I Sbjct: 241 SGIEIYPNGISTSLPENVQIKIIQSIKGLEKAKIIRPGYAVEYDYLDPRHLKLTLESKFI 300 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 SGLFLAGQINGTTGYEEAAAQGL+AG+N++ ++ D R ++Y+GV+IDDL +KG Sbjct: 301 SGLFLAGQINGTTGYEEAAAQGLLAGLNASLHASDNDGWFPKRNEAYLGVLIDDLCNKGT 360 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYI----QEYNFLRS 476 EPYRMFT+RAEYR+ LR DNAD RLT IG KLG I E+R KR+ + + E L++ Sbjct: 361 KEPYRMFTARAEYRLILREDNADLRLTEIGRKLGLIDEKRWKRYNQKLMNIKNELKRLKN 420 Query: 477 LLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI---CPDARKFSSLVI 533 L S + + N + ++ K + K+ +A + L P+ + NL SI P + + Sbjct: 421 LTISPISNNINQLNKILNVKLNIKS-SAKDLLKRPEITYDNLMSINGFGPGIQDVEA--T 477 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 ++++I Y Y RQ E +E ++ K +Y + LS+E+ KL+ K Sbjct: 478 QQIEICEKYQGYISRQKKEIDRNLKKENIMLFKIKNYHEIRGLSHEVISKLNYYK 532 >gi|332886126|gb|EGK06370.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Dysgonomonas mossii DSM 22836] Length = 624 Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust. Identities = 260/625 (41%), Positives = 369/625 (59%), Gaps = 16/625 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +N YD+IV+G GHAGCEAAA AA +G+ T LIT + I MSCNPA+GG+ KG +VRE Sbjct: 1 MNFKYDIIVVGAGHAGCEAAAAAANMGSKTLLITMDMNKIAQMSCNPAVGGIAKGQIVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G MG V D IQFR+LN KGPA+ PR Q+DR + + + I + +NL + Q Sbjct: 61 IDALGGQMGIVTDKTAIQFRMLNKSKGPAMWSPRAQSDRARFIMKWREIIENTDNLFIWQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V + ++ + VVLT GTFL G++HIGK ++ GR+ + S Sbjct: 121 DTVTSLIVQDKTVTGVKTAMGVEFSAKAVVLTNGTFLNGLMHIGKTQLGGGRVSEPASFG 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNRQIEC 240 + F F T R+KTGTPAR+DG+++ + E+Q D+ FS++ + T +Q+ C Sbjct: 181 ITEQLRDFGFTTDRMKTGTPARVDGRSVDFSLMEEQKGDDDFHKFSYLDYEPRTLKQLSC 240 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH + + + S +Y+G IKS GPRYCPSIE KIV F E+ HQ+FLEPEG Sbjct: 241 WITYTNDDTHATLRDGLDDSPLYNGQIKSIGPRYCPSIETKIVTFEEKTSHQLFLEPEGE 300 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 +T Y NG S++LP Q + ++ IP ++I RPGYAIEYD+ +P +L TLETK + Sbjct: 301 STQEYYLNGFSSSLPLHTQIEALQKIPAFRNIHIYRPGYAIEYDFFDPTQLKHTLETKLV 360 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 LF AGQINGTTGYEEA QGL+AGIN+ ++ + R ++YIGV+IDDL +KGV Sbjct: 361 KNLFFAGQINGTTGYEEAGGQGLIAGINAHINTHGGNEFVLKRDEAYIGVLIDDLVTKGV 420 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEY----NFLRS 476 EPYRMFTSRAEYRI LR D+AD RLT G +G + R + +E NF+ + Sbjct: 421 DEPYRMFTSRAEYRILLRQDDADVRLTEKGYNIGLAKQERIALLNEKKEEVQKIINFVAN 480 Query: 477 LLKSLVLTSKNLSSTSIS-FKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIER 535 ++ LS + KQ K + + ++ P +I+++ P + + R Sbjct: 481 YSLKPEYINEGLSKLGTNPLKQGMKLK---DVITRPQITIKSIAEYIPAFKVELDKIPNR 537 Query: 536 -------LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 +I Y Y R+ A +I E I FDY ++ +LS E ++KLS + Sbjct: 538 REEIIEAAEIIIKYDGYIKREQTIADKITRLENIRIKDKFDYENISSLSTEARQKLSKIN 597 Query: 589 PFNLLQASKIEGMTPAALNLLLIYI 613 P + QAS+I G++P +++LL+ + Sbjct: 598 PETIAQASRIPGVSPNDISILLVLL 622 >gi|219116699|ref|XP_002179144.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217409035|gb|EEC48967.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 843 Score = 442 bits (1137), Expect = e-122, Method: Compositional matrix adjust. Identities = 307/732 (41%), Positives = 404/732 (55%), Gaps = 124/732 (16%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAGC+AAA AA+ GA TAL+T K +TIG +SCNP+IGG+GKGHLVREIDAL Sbjct: 96 YDVIVVGGGHAGCDAAAAAARTGARTALVTQKLATIGELSCNPSIGGIGKGHLVREIDAL 155 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGLMG VAD GI FR+LN +KGPAVRGPR Q DR+LY+ MQ + + NL +++ V Sbjct: 156 DGLMGNVADQGGIHFRLLNRRKGPAVRGPRAQMDRDLYQQCMQDILRNYPNLHLVEASVQ 215 Query: 126 GF----NTEKNIISSIVMQ-------------------DNS--------MIRCST----- 149 +T + S MQ DN MI+ +T Sbjct: 216 DLLLDQSTSAPLESMAPMQSGDLGQGLLGSTGRGSSPVDNGANVDQQARMIQAATSSSRN 275 Query: 150 ----------------------VVLTTGTFLRGVIHIGKLKIPAGR-MGDS-----PSNS 181 VV+TTGTFLRGV+ +G + GR + DS PS Sbjct: 276 ARIRGIVAETPDGKTIELASRAVVITTGTFLRGVLMMGHERYSGGRHLRDSEEVEPPSVG 335 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ---- 237 L + +F+F GRLKTGTPAR+DG TI W Q ++ PFS + + Q Sbjct: 336 LAQTLARFEFPLGRLKTGTPARIDGSTIDWSALAIQPSENPAQPFSHLR-QFNEEQPPLV 394 Query: 238 -----IECGITRTNLETHRIIMENIKHSAIYSG-DIKSYGPRYCPSIEDKIVRFGERNGH 291 I+C T TN ETH+++ME Y G D K GPRYCPSI K+ RF +R GH Sbjct: 395 EAGTLIDCYQTATNEETHKLVMEFEHMLPQYDGLDGKGNGPRYCPSIYKKVQRFPQRTGH 454 Query: 292 QIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKEL 351 FLEPEGLNTD+VYPNG+S P EIQ + +RT+ GL V IIRPGY +EYD++NP L Sbjct: 455 NCFLEPEGLNTDLVYPNGMSGPYPPEIQQKILRTMKGLGAVEIIRPGYDVEYDFVNPTAL 514 Query: 352 FPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDC-------ICFSRT 404 TLETK+I GL+LAGQI GTTGYEEAAAQG+VAG N+ R + R Sbjct: 515 THTLETKRIGGLYLAGQICGTTGYEEAAAQGIVAGANAGRAAAAATRGDPPPLPFVIGRD 574 Query: 405 DSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF 464 + YIGV++DDL ++G EPYRMFTSRAEYRISLR DNAD RLT GM+ G + + ++ Sbjct: 575 EGYIGVLVDDLVTRGTSEPYRMFTSRAEYRISLRADNADLRLTRKGMEYGLVKDE-ERMS 633 Query: 465 AKYIQEY------NFLRSL-LKSLVLTSK---NLSSTSISFKQDGKTRTAYEFLSYPDFS 514 A +E+ L S LK +S+ +L + ++ G+ +TA E L P+ + Sbjct: 634 ALDAREFLIDDRVGKLSSFQLKVTEWSSRGGLDLMGGAQMKRKIGQKKTAEEVLGMPNVT 693 Query: 515 IQNLFSICPDARKFSSLVIE----------RLQIES-------------------SYAAY 545 ++++ I K +V+E R +E+ Y +Y Sbjct: 694 LKDVEDIMKAVSKEPDVVVETTDPLPSKEVRAMLEAMDNFVPSPASVYDTVEASVKYQSY 753 Query: 546 TGRQMIEAKEIKFEEKRLIPKDFDY--SSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 RQ + + + + IP D +Y LP LS E EKLS ++P AS+I GMTP Sbjct: 754 VRRQHKDMESWRRAQGLRIPPDVEYVHKYLPTLSIEELEKLSQIRPATFADASQISGMTP 813 Query: 604 AALNLLLIYIKK 615 +L L ++++ Sbjct: 814 KSLIYLYHHVQR 825 >gi|159900273|ref|YP_001546520.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Herpetosiphon aurantiacus ATCC 23779] gi|159893312|gb|ABX06392.1| glucose inhibited division protein A [Herpetosiphon aurantiacus ATCC 23779] Length = 650 Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust. Identities = 259/645 (40%), Positives = 364/645 (56%), Gaps = 32/645 (4%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M+N +YDV+V+GGGHAGCEAA AA++G+ T L+T + MSCNP+IGG KG+LVR Sbjct: 1 MLNLTYDVVVVGGGHAGCEAALAAARMGSQTLLLTIDLDKLAHMSCNPSIGGPAKGNLVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G MG + D IQ R+LN KGPAV+ R Q+D+ LY AM+ + +Q NL + Sbjct: 61 EIDALGGAMGVITDRTLIQIRLLNETKGPAVQALRAQSDKRLYAKAMKEFLEAQPNLALK 120 Query: 121 QGEVAGF----NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGD 176 Q V + ++ Q R +VLTTGTFLRG G+ IPAGRMG+ Sbjct: 121 QAMVERIIPLADQADGARFAVETQTGWQYRAKALVLTTGTFLRGRAITGESIIPAGRMGE 180 Query: 177 SPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI--- 233 P+ +L + + F RLKTGTP R+D +TI + E Q + F F D Sbjct: 181 QPAINLSSDLSQLGFPLVRLKTGTPPRIDARTIDFSGLEIQPGSSTPLYFGFNYDGQRPE 240 Query: 234 ------------------TNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYC 275 Q+ C T E H+ I +N+ + ++SG I+ GPRYC Sbjct: 241 SLVHGPPNPIYPEPMLDGWQPQLPCYHIYTTPEFHQHIRDNLHRAPMFSGVIEGVGPRYC 300 Query: 276 PSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNII 335 PSIEDKIVRF ++ H FLEPEG T +Y G +T+LPE++Q +R+IP L KV I+ Sbjct: 301 PSIEDKIVRFADKESHGFFLEPEGWETLEIYVQGCNTSLPEDVQWAMLRSIPALRKVEIM 360 Query: 336 RPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNK 395 R GYAIEYD + E+ +LE K++ LF AGQINGTTGYEEA AQGL+AGIN+A K + Sbjct: 361 RVGYAIEYDAVATGEITASLEAKRLPNLFFAGQINGTTGYEEAGAQGLMAGINAALKVAE 420 Query: 396 LDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGC 455 R +YIGVMIDDL +K + EPYRMFTSRAE+R+ LR DNAD RLTP+ +LG Sbjct: 421 RAPFILRRDQAYIGVMIDDLVTKEIREPYRMFTSRAEHRLLLRGDNADLRLTPLAAELGL 480 Query: 456 IGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDG-----KTRTAYEFLSY 510 + R + + + L+ L T + T+ + G + + + L Sbjct: 481 VSAERAAQVERKQWAIDQASQQLRGLRYTPS--AETNGRLQAAGIEPLLQPASGEDILRR 538 Query: 511 PDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDY 570 L + PD + V E++++ + YA Y ++ + ++ E R +P D D Sbjct: 539 VGVKYAQLAEVQPDLPVVEADVAEQVELSAKYAVYIAKEQASVERVRKMEDRRLPADLDI 598 Query: 571 SSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 ++P+L E ++ L +P L QAS++ G+ PA + LLI++++ Sbjct: 599 EAIPSLRIEARQVLKRFRPATLGQASRLAGINPADIAHLLIHLER 643 >gi|294155785|ref|YP_003560169.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Mycoplasma crocodyli MP145] gi|291599896|gb|ADE19392.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Mycoplasma crocodyli MP145] Length = 612 Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust. Identities = 252/623 (40%), Positives = 363/623 (58%), Gaps = 29/623 (4%) Query: 1 MINRS--YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHL 58 MIN+ YD IVIGGGHAG EA A TAL + + + +M CNP+IGG KG + Sbjct: 1 MINKENEYDAIVIGGGHAGIEATFALANKDKKTALFSFNLNKLATMPCNPSIGGPAKGVI 60 Query: 59 VREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLD 118 REIDAL G G AD A IQ ++LN KGPAVR R Q D+E Y ++ +L+ E +D Sbjct: 61 TREIDALGGQQGFFADNAMIQIKMLNESKGPAVRAIRAQIDKEKYSKLVKEAVLNHEYID 120 Query: 119 VIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSP 178 + V + N I I +D + VV+TTGT++ I G +G G+ Sbjct: 121 AFEAIVTELVVDNNTIIGIKTEDGIFYKSKVVVITTGTYMSSRIIRGSDITYSGPDGEKT 180 Query: 179 SNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQI 238 +N L +S F+ RLKTGTP R+ +I + K EK+ D+ + FS + +QI Sbjct: 181 TNKLSDSLRNIGFNLQRLKTGTPPRIYADSIDFSKVEKEKLDDSFLCFSSRSHIKLPKQI 240 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C +T TN +TH +I +N+ S +YSG I+ GPRYCPSIEDKI+RF ++ HQIF EPE Sbjct: 241 SCYLTYTNSKTHELIEQNVHLSGMYSGLIEGIGPRYCPSIEDKIMRFRDKERHQIFFEPE 300 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 L+ ++Y NG+ST+LP IQ + I+TIPGLE + + YAIEYD ++P +L +LETK Sbjct: 301 TLDGSIIYINGLSTSLPISIQEKLIKTIPGLENAKVQKWAYAIEYDALDPLDLKASLETK 360 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 KI+ LF AGQINGT+GYEEAAAQGL+AGIN+A K + + + R ++YIGV+IDDL +K Sbjct: 361 KINNLFSAGQINGTSGYEEAAAQGLLAGINAALKIDCKEPLILKRHEAYIGVLIDDLVTK 420 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYRM TSRAEYR+ LR DN+D RL+ + G + E EYNF+++ Sbjct: 421 GTKEPYRMLTSRAEYRLLLRNDNSDIRLSKYAYEQGLLTE----------TEYNFIKNKY 470 Query: 479 KSLVLTSKNLSSTSISFKQDGKTR-------TAYEFLSYPDFSIQNLFSICPDARKFSSL 531 + + + L + IS K + + + ++ P+ + +F + Sbjct: 471 EKIDKKIEELKNVFISSKDPLALKYGITNGVSMLKVIARPEVDANDFLG----DFEFKNE 526 Query: 532 VIERLQIESSYAAYTGRQMIEA-KEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 ++ ++++ Y +Q A K IK E + IP + DY ++P ++ E K KL + P Sbjct: 527 LVVAIRLD----GYIKKQQQSASKMIKLEALK-IPTNIDYDNVPNIATEAKIKLKKILPL 581 Query: 591 NLLQASKIEGMTPAALNLLLIYI 613 + QAS+I G+ PA + +L+ Y+ Sbjct: 582 TIGQASRISGINPADIQMLIFYL 604 >gi|310779688|ref|YP_003968021.1| glucose inhibited division protein A [Ilyobacter polytropus DSM 2926] gi|309749011|gb|ADO83673.1| glucose inhibited division protein A [Ilyobacter polytropus DSM 2926] Length = 622 Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust. Identities = 241/628 (38%), Positives = 367/628 (58%), Gaps = 25/628 (3%) Query: 2 INR-SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 +NR +DVIV+GGGHAGCEAA +A+LG TA+ T I MSCNP+IGG GK HLV Sbjct: 1 MNRMEFDVIVVGGGHAGCEAALASARLGKKTAMFTMYLDNIAMMSCNPSIGGPGKSHLVA 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EID L G +GR D +Q + LN KGPA R R QAD+ YR+ M+ I + L+VI Sbjct: 61 EIDVLGGEIGRHTDRYNLQLKHLNTSKGPAARITRGQADKYWYRVKMKEIIENTPGLEVI 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q + TE ++ ++ + +VVL TGTFL+ + IG + PAGR G+ + Sbjct: 121 QETIDEIITEDGHVTGVISSLGIEYKAKSVVLATGTFLKAKVVIGDVVYPAGRQGEGSAE 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 L S +K D R +T TP R+D +T+ + K ++ +E FS T K NR + Sbjct: 181 ELSESLLKNGIDLERYQTATPPRIDKRTVDFSKLKEMHGEENPNFFSLFTKKEKNRTVPT 240 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +T T +T + E + S I +G IK++GPR+CPS++ K++ F ++ HQIFLE E + Sbjct: 241 WLTHTTEKTIDVARELLHFSPIVTGVIKTHGPRHCPSLDRKVLNFPDKKDHQIFLEMESM 300 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 ++ +Y NG++TA+P Q + +RTI GLE I+R GYA+EYDY +L+P+LE KK+ Sbjct: 301 ESNELYVNGLTTAMPPFAQEKMMRTIAGLENAEIMRYGYAVEYDYAPAYQLYPSLENKKV 360 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 L+ AGQINGT+GYEEAA QG +AG+N+ARK +K D + R+++YIGV+IDD+ K Sbjct: 361 RNLYFAGQINGTSGYEEAATQGFMAGVNAARKVDKKDPVIIDRSEAYIGVLIDDIIHKKT 420 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYR+ SRAEYR++LR DNA RL ++G I E + +L + +K+ Sbjct: 421 PEPYRVLPSRAEYRLTLRFDNAFMRLLDKSREIGIISEDK----------IEYLENCIKN 470 Query: 481 LVLTSKNLSSTSISF--------KQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARK 527 + L + L S+ K+ K R T + L + + S ++L I D ++ Sbjct: 471 IDLEVQRLKQESVPLSKANELLEKKGEKQRVVKGVTVSDILKFKNVSYEDLAYIT-DIQE 529 Query: 528 FSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSIL 587 F V +++ Y + R+ + ++ K E IP+DFD+S + +SN + + + Sbjct: 530 FPDFVKNQIETIIKYEVFIDRERSQIEKFKKLESLKIPEDFDFSEIKGVSNIARHGMEEV 589 Query: 588 KPFNLLQASKIEGMTPAALNLLLIYIKK 615 +P ++ +A++I G+T + LL+ +I++ Sbjct: 590 QPISIGEATRISGVTGHDIALLIAHIER 617 >gi|332850744|ref|ZP_08432991.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Acinetobacter baumannii 6013150] gi|332730581|gb|EGJ61897.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Acinetobacter baumannii 6013150] Length = 549 Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust. Identities = 234/537 (43%), Positives = 327/537 (60%), Gaps = 6/537 (1%) Query: 86 KKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMI 145 +KG AVR R QADR Y+ A++ + +Q NLD+ Q E + + +V Q Sbjct: 10 RKGAAVRATRAQADRVRYKAAIRETLENQANLDIFQQAADDLIVEGDTVKGVVTQMGIRF 69 Query: 146 RCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLD 205 TVVLTTGTFL GVIH+G K GR GD PS +L + GRLKTGTP R+D Sbjct: 70 DAKTVVLTTGTFLGGVIHVGLEKSSGGRAGDPPSIALAQRLRELKLPVGRLKTGTPPRID 129 Query: 206 GKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGITRTNLETHRIIMENIKHSAIYS 264 +++ + Q D SFM D + Q+ C IT TN +TH II + S +Y+ Sbjct: 130 ARSVDFSVMTPQPGDFPSPVMSFMGDVSMHPEQVNCYITHTNEKTHDIIRGGLDRSPMYT 189 Query: 265 GDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIR 324 G I+ GPRYCPSIEDKI RF +++ HQ+FLEPEGL+T +YPNGIST+LP ++Q + +R Sbjct: 190 GVIEGVGPRYCPSIEDKIHRFSDKDSHQVFLEPEGLDTHELYPNGISTSLPFDVQFELVR 249 Query: 325 TIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLV 384 +I G+E +I+RPGYAIEYDY NP+ L TLETK I+GL+ AGQINGTTGYEEA AQGL+ Sbjct: 250 SIRGMENAHILRPGYAIEYDYFNPQALKFTLETKAINGLYFAGQINGTTGYEEAGAQGLL 309 Query: 385 AGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADN 444 AG+N+AR++ + + R +Y+GV++DDL + G EPYRMFTSRAEYR+ LR DNAD Sbjct: 310 AGLNAARRAWEQEEWTPKRDQAYMGVLVDDLITLGTKEPYRMFTSRAEYRLMLREDNADQ 369 Query: 445 RLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSS---TSISFKQDGKT 501 RLT IG +LG + + R + + ++ S L+ + N ++ K Sbjct: 370 RLTTIGRELGLVDDVRWAAYCEKMEAVERETSRLQHVWAAPNNPMGKKFVEMTGADLSKE 429 Query: 502 RTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEK 561 +A + L P+ + + + + S V E+++I Y Y RQ + ++K E+ Sbjct: 430 CSAIDLLKRPNINFGQIAELT--GSEVSQQVGEQIEIAVKYEGYINRQHEDVAQLKRLEE 487 Query: 562 RLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTV 618 IP DFDY + LS E+ +KL ++P L QAS+I G+TPAA+ L++I I+KN + Sbjct: 488 TKIPADFDYDVVSGLSREITQKLKTVRPETLAQASRIPGVTPAAVQLVMITIRKNNM 544 >gi|291320104|ref|YP_003515362.1| glucose inhibited division protein A [Mycoplasma agalactiae] gi|290752433|emb|CBH40404.1| Glucose inhibited division protein A [Mycoplasma agalactiae] Length = 613 Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust. Identities = 252/621 (40%), Positives = 358/621 (57%), Gaps = 26/621 (4%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +N+ YD IVIGGGHAG EAA + G +T L+T + +G M CNP+IGG KG + RE Sbjct: 1 MNKKYDAIVIGGGHAGLEAAFAISHKGHNTLLLTFNSKKLGMMPCNPSIGGPAKGIITRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G+ G AD A IQ ++LN+ KGPAVR R Q D+E Y +L Q NL++++ Sbjct: 61 IDALGGMQGLWADLATIQLKMLNLSKGPAVRALRAQIDKEKYSQLAYEYVLKQPNLELLE 120 Query: 122 GEVAGFNTEKN-IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 G ++N +++++ +I V+TTGT++ I G+ +G + + Sbjct: 121 GVAEEVIVDENGYFKGVLVENIGLIEAKVCVITTGTYMNSRILRGQDITTSGPDNEKTTP 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 L S K F RLKTGTP R+ +I +D+ E++ + I FS ++ +QI C Sbjct: 181 KLSASLAKLGFTLQRLKTGTPPRIYSDSINFDEVEQEVLSDVNISFSSRSNLKMPKQIAC 240 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +T T ETHRII ENI S +YSG I+ GPRYCPS+EDKIV+F ++ HQIF EPE Sbjct: 241 YLTYTTPETHRIIEENIHRSPMYSGVIEGIGPRYCPSVEDKIVKFPDKERHQIFFEPETA 300 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + + Y NG+ST++P ++Q I++IPGL + + YAIEYD ++P +L +LETK + Sbjct: 301 DGAITYVNGLSTSMPIDVQELMIKSIPGLRNAKVQKWAYAIEYDALDPLQLKESLETKLV 360 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 LF AGQINGT+GYEEAAAQGL+AGIN+A K D I R YIGV+IDDL +KG Sbjct: 361 HNLFTAGQINGTSGYEEAAAQGLIAGINAALKLEDKDPIVILRNHGYIGVLIDDLVTKGT 420 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIG-ERRQKRFAKY------IQEYNF 473 EPYRM TSRAEYR+ LR DNAD+RL+ K G I E QK KY IQ N Sbjct: 421 KEPYRMLTSRAEYRLLLRNDNADDRLSEYAYKSGMISKEEYQKVLDKYKLIDDEIQRLNT 480 Query: 474 LRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVI 533 KS V N+++ S T +S PD ++ P + +++V Sbjct: 481 TYLSGKSDVALKYNITNGS----------TLLNVISRPDVDPSDIIPNFPYLEEITTMV- 529 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 RL Y +Q +A + E IP+D +Y + ++ E ++K ++P + Sbjct: 530 -RLH------GYIEKQKSDANKAVRLENLKIPEDLNYFDVKNIAIEARQKFEKIRPATIG 582 Query: 594 QASKIEGMTPAALNLLLIYIK 614 QAS+I G+ PA + +L+ +++ Sbjct: 583 QASRISGINPADIQMLMFHLE 603 >gi|15639038|ref|NP_218484.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Treponema pallidum subsp. pallidum str. Nichols] gi|189025278|ref|YP_001933050.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Treponema pallidum subsp. pallidum SS14] gi|6016130|sp|O83084|MNMG_TREPA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|238689312|sp|B2S1Z2|MNMG_TREPS RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|3322299|gb|AAC65038.1| glucose inhibited division protein A (gidA) [Treponema pallidum subsp. pallidum str. Nichols] gi|189017853|gb|ACD70471.1| glucose inhibited division protein A [Treponema pallidum subsp. pallidum SS14] gi|291059460|gb|ADD72195.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Treponema pallidum subsp. pallidum str. Chicago] Length = 630 Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust. Identities = 259/628 (41%), Positives = 376/628 (59%), Gaps = 23/628 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGGHAG EAA AA++G T LIT +IG +SCNP+IGG+ KG++VREIDAL Sbjct: 8 YDVIVVGGGHAGAEAALAAARMGEHTLLITQTIDSIGRLSCNPSIGGISKGNIVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ ADA IQ+R+LN +GPAV+ PR QAD+ LY ++ + ++L + Q V Sbjct: 68 GGEMGKFADACMIQYRLLNKSRGPAVQAPRIQADKFLYAQKVKYTLECTQHLHLYQDTVV 127 Query: 126 GF----NTEKNIIS-----SIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGD 176 T+ ++ ++V I VVLTTGTF+ G ++IG+ + P GR+G+ Sbjct: 128 DVVCSNTTDAGYVAYGAAHAVVTARGRRISARAVVLTTGTFMEGRVYIGEYEAPEGRLGE 187 Query: 177 SPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR 236 + L + K F GRLKTGTPAR+ K++ EKQ AD + PFSF +I Sbjct: 188 HAAEGLGAALRKKGFQMGRLKTGTPARVLRKSVDLSVMEKQEADAIMRPFSFAHVEINRP 247 Query: 237 QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLE 296 +C I TN TH++I EN S +SG IK+ G RYCPSIEDK+ +F +R HQ+++E Sbjct: 248 HADCYINYTNERTHQLIRENFHRSPFFSGRIKAVGTRYCPSIEDKVRKFPDRIRHQLYIE 307 Query: 297 PEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLE 356 PEGL+T+ +Y NG+S+ LPE+IQ + IRTIPG+E+ I RP YA++Y + P +L L+ Sbjct: 308 PEGLDTEELYINGLSSCLPEDIQDEMIRTIPGMERAVITRPAYAVDYAVLFPVQLGIDLQ 367 Query: 357 TKKISGLFLAGQINGTTGYEEAAAQGLVAGINSA------RKSNKLDCICFSRTDSYIGV 410 TK++SGLF AGQINGT+GYEEA QG++AGIN+A + + R ++YIGV Sbjct: 368 TKRVSGLFSAGQINGTSGYEEAGGQGIIAGINAALYARSTKTKEEYHPFVLKRDEAYIGV 427 Query: 411 MIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQE 470 MIDDL ++G+ EPYRMFT+RAEYR+ LR D AD RLT +G + + K ++ Sbjct: 428 MIDDLVTQGIDEPYRMFTARAEYRLKLRHDTADERLTEKAYAIGLQKKSAVETLQKKMRT 487 Query: 471 YNFLRSLLKS--LVLTSKNLSSTSISFKQD-GKTRTAYEFLSYPDFSIQNLFSICPDARK 527 + + LL++ + LT N + K GK+ A L P + + S+ + Sbjct: 488 KHEILHLLQTNKVSLTHAN---AYVQLKPHIGKSFAA--TLRDPVIPLGLIASLNEQIAQ 542 Query: 528 FSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSIL 587 F V + + +E Y Y Q +++ E IP FDY+ + LS E + +L + Sbjct: 543 FPLEVFQSVGVEIRYEHYIAAQDQRIAQVEKMEGIKIPAHFDYARISGLSVESRTRLEHV 602 Query: 588 KPFNLLQASKIEGMTPAALNLLLIYIKK 615 +P + Q ++ G+ P+ + LLL ++K+ Sbjct: 603 RPDTIGQVGRMRGIRPSDVMLLLAHLKR 630 >gi|319776804|ref|YP_004136455.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmg [Mycoplasma fermentans M64] gi|318037879|gb|ADV34078.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Mycoplasma fermentans M64] Length = 617 Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust. Identities = 260/620 (41%), Positives = 354/620 (57%), Gaps = 14/620 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 YD +VIGGGHAG EAA A T LI+ +G M CNP+IGG KG + REID Sbjct: 9 HKYDAVVIGGGHAGLEAAFALAHKNHKTVLISLNKERLGMMPCNPSIGGPAKGIITREID 68 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ-- 121 AL G+ G AD + IQ ++LN KGPAVR R Q D+E Y +L + NLD+I+ Sbjct: 69 ALGGMQGLWADLSMIQLKMLNQSKGPAVRALRAQIDKEKYMKIALEYVLKEPNLDLIEDI 128 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 E N++K I + + ++ V+TTGT++ I G + +G + + Sbjct: 129 AEEILVNSKKEF-KGIKLANGDIVEAEVCVVTTGTYMDSRILRGDVIKISGPDNEKTTPK 187 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L S + F RLKTGTP R+ +I + + E++ + + FS ++ RQI C Sbjct: 188 LSASLKEHGFIIQRLKTGTPPRIFSDSIDYSQVEQEVLSDTNLSFSSRSNVKLPRQIACY 247 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T T ETH+II EN+ SA+Y G IK GPRYCPS+EDKIV+F + HQIF EPE + Sbjct: 248 LTYTTPETHKIIEENLTKSAMYGGIIKGIGPRYCPSVEDKIVKFPSKERHQIFFEPETAD 307 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 + Y NG+ST++P E+Q IR+IPGL+K I + YAIEYD I+P +L PTLETK I Sbjct: 308 GSITYVNGLSTSMPVEVQELMIRSIPGLQKCKIQKYAYAIEYDAIDPLQLKPTLETKIIK 367 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 + AGQINGT+GYEEAAAQGL+AGIN+A K D I R +YIGV+IDDL +KG Sbjct: 368 NFYTAGQINGTSGYEEAAAQGLIAGINAALNLEKKDGIVILRNHAYIGVLIDDLVTKGTK 427 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRM TSRAEYR+ LR DNAD RL G K+G I + ++ K I++Y + ++ L Sbjct: 428 EPYRMLTSRAEYRLLLRNDNADIRLAEYGYKIGLIDKH---QYQKVIKKYELIDQEIQRL 484 Query: 482 VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 T LSS + G T T L + + I PD F L E L Sbjct: 485 HTTY--LSSKDPVAIKYGIT-TGISLLQTLARPAVDPYDIIPD---FPYL--EELTTMVR 536 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y +Q +A + E IP+D DY+ + ++ E K+KL +KP + QAS+I G+ Sbjct: 537 LHGYIEKQKSDANKAVRLENYKIPEDLDYNKINNIATEAKQKLIKVKPTTIGQASRISGI 596 Query: 602 TPAALNLLLIYIKKNTVKLN 621 PA + +L+ Y++ K N Sbjct: 597 NPADIQMLMFYLETTRKKNN 616 >gi|160902994|ref|YP_001568575.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Petrotoga mobilis SJ95] gi|189039348|sp|A9BGL2|MNMG_PETMO RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|160360638|gb|ABX32252.1| glucose inhibited division protein A [Petrotoga mobilis SJ95] Length = 625 Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust. Identities = 255/617 (41%), Positives = 359/617 (58%), Gaps = 9/617 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 S+DVIV+G GHAG EAA +AK+G +T ++ T+G CNPAIGG KG + REIDA Sbjct: 7 SFDVIVVGAGHAGIEAALASAKMGMNTLILNINLDTLGWAPCNPAIGGPAKGVVAREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G+ +V D I R+LN KG AVR R Q D+ Y M+ + + +NL + G Sbjct: 67 LGGVQAKVTDETMINIRMLNTSKGIAVRALRAQIDKYDYSQRMKEILETTDNLILRHGIA 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E I + + V+LTTGTFLRG I +G+ AGRMG+ P+NSL Sbjct: 127 KNILVENGKIIGLETELGMKYFAKVVILTTGTFLRGKIFVGRNTFEAGRMGELPANSLTY 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGIT 243 S +K + R KTGTPAR+ +I + K + Q + + FS+ + ++ + C + Sbjct: 187 SLIKEGLEVSRFKTGTPARVRKDSIDFSKFDIQETADEPLAFSYWSQPRVLTKDYPCYLG 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIK---SYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 RTN +TH +I + I S +Y GD+K S GPRYCPSIEDK+++F ++ HQ FLEPE Sbjct: 247 RTNSKTHEVIRKYIAFSPLY-GDVKLIQSIGPRYCPSIEDKVMKFN-KDTHQFFLEPESK 304 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 ++ +Y NG+ST+LP E Q + ++TIPGLE I RP YA+EYD++NP +L LETKKI Sbjct: 305 HSKEIYLNGLSTSLPFEAQIEILKTIPGLENAIIERPAYAVEYDFVNPIQLKHNLETKKI 364 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLFLAGQINGT+GYEEAA QGL+AGIN+A K + R+++Y+GV+IDDL +KGV Sbjct: 365 EGLFLAGQINGTSGYEEAAGQGLLAGINAALKIRGEEPFVLDRSEAYLGVLIDDLITKGV 424 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYR+ TSRAEYR+ LR DNA RL G K G + + + ++ + N L Sbjct: 425 DEPYRLLTSRAEYRLLLRHDNAHLRLYKYGYKYGLLSKEQYEQLHRLENLINHQIERLDQ 484 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAY--EFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 + ++ ++ S T+ + E L + S +L + +A + VIE++ I Sbjct: 485 IKVSPNQVNDILASKGSSKITQPVHMSELLKRSEISYTDLKHLDEEAVE-EKEVIEQIDI 543 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 Y Y R E ++K EK IP D +Y + ++ E KEKL +KP Q +I Sbjct: 544 HFKYNGYFQRMQDEIAKMKELEKEKIPSDIEYDKINNIAYEAKEKLKKIKPETFGQLLRI 603 Query: 599 EGMTPAALNLLLIYIKK 615 G+ PA L IY+K+ Sbjct: 604 PGINPADAINLRIYLKQ 620 >gi|238809619|dbj|BAH69409.1| hypothetical protein [Mycoplasma fermentans PG18] Length = 620 Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust. Identities = 260/620 (41%), Positives = 354/620 (57%), Gaps = 14/620 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 YD +VIGGGHAG EAA A T LI+ +G M CNP+IGG KG + REID Sbjct: 12 HKYDAVVIGGGHAGLEAAFALAHKNHKTVLISLNKERLGMMPCNPSIGGPAKGIITREID 71 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ-- 121 AL G+ G AD + IQ ++LN KGPAVR R Q D+E Y +L + NLD+I+ Sbjct: 72 ALGGMQGLWADLSMIQLKMLNQSKGPAVRALRAQIDKEKYMKIALEYVLKEPNLDLIEDI 131 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 E N++K I + + ++ V+TTGT++ I G + +G + + Sbjct: 132 AEEILVNSKKEF-KGIKLANGDIVEAEVCVVTTGTYMDSRILRGDVIKISGPDNEKTTPK 190 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L S + F RLKTGTP R+ +I + + E++ + + FS ++ RQI C Sbjct: 191 LSASLKEHGFIIQRLKTGTPPRIFSDSIDYSQVEQEVLSDTNLSFSSRSNVKLPRQIACY 250 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T T ETH+II EN+ SA+Y G IK GPRYCPS+EDKIV+F + HQIF EPE + Sbjct: 251 LTYTTPETHKIIEENLTKSAMYGGIIKGIGPRYCPSVEDKIVKFPSKERHQIFFEPETAD 310 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 + Y NG+ST++P E+Q IR+IPGL+K I + YAIEYD I+P +L PTLETK I Sbjct: 311 GSITYVNGLSTSMPVEVQELMIRSIPGLQKCKIQKYAYAIEYDAIDPLQLKPTLETKIIK 370 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 + AGQINGT+GYEEAAAQGL+AGIN+A K D I R +YIGV+IDDL +KG Sbjct: 371 NFYTAGQINGTSGYEEAAAQGLIAGINAALNLEKKDGIVILRNHAYIGVLIDDLVTKGTK 430 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRM TSRAEYR+ LR DNAD RL G K+G I + ++ K I++Y + ++ L Sbjct: 431 EPYRMLTSRAEYRLLLRNDNADIRLAEYGYKIGLIDKH---QYQKVIKKYELIDQEIQRL 487 Query: 482 VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 T LSS + G T T L + + I PD F L E L Sbjct: 488 HTTY--LSSKDPVAIKYGIT-TGISLLQTLARPAVDPYDIIPD---FPYL--EELTTMVR 539 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y +Q +A + E IP+D DY+ + ++ E K+KL +KP + QAS+I G+ Sbjct: 540 LHGYIEKQKSDANKAVRLENYKIPEDLDYNKINNIATEAKQKLIKVKPTTIGQASRISGI 599 Query: 602 TPAALNLLLIYIKKNTVKLN 621 PA + +L+ Y++ K N Sbjct: 600 NPADIQMLMFYLETTRKKNN 619 >gi|154494270|ref|ZP_02033590.1| hypothetical protein PARMER_03621 [Parabacteroides merdae ATCC 43184] gi|154085954|gb|EDN84999.1| hypothetical protein PARMER_03621 [Parabacteroides merdae ATCC 43184] Length = 625 Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust. Identities = 259/626 (41%), Positives = 366/626 (58%), Gaps = 19/626 (3%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAGCEAAA AA +G+ T LIT + I MSCNPA+GG+ KG +VREIDA Sbjct: 4 NYDVIVVGAGHAGCEAAAAAANMGSKTLLITMDMNKIAQMSCNPAVGGIAKGQIVREIDA 63 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ-ENLDVIQGE 123 L G MG V D IQFR+LN KGPA+ PR+Q+DR + + R IL NL + Q Sbjct: 64 LGGYMGIVTDRTAIQFRMLNQSKGPAMWSPRSQSDRARF-IECWRGILENLPNLYIWQDT 122 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + N + + +VVLT GTFL G++HIG+ +I GR+ + + L Sbjct: 123 VRELLLDGNTVCGVKTYMGVEFHAKSVVLTNGTFLNGLMHIGRTQIRGGRIAEPAATGLT 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQIECGI 242 + + R+KTGTP R+D +++ +D+ +Q + FS+M T +Q+ C Sbjct: 183 EQLVSLGIKSERMKTGTPVRIDARSVHFDEMAEQPGENDFHKFSYMDTSHRVLKQLSCWT 242 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN H ++ E + S +Y+G I+S GPRYCPSIE KIV F ++ HQ+FLEPEG T Sbjct: 243 TFTNEACHAVLREGLPDSPLYNGQIQSIGPRYCPSIETKIVTFADKPQHQLFLEPEGETT 302 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 Y NG S++LP +IQ + ++ IP + I RPGYAIEYD+ +P +L LETK I Sbjct: 303 QEYYLNGFSSSLPLDIQLRALQQIPAFRDIQIYRPGYAIEYDFFDPTQLHHNLETKLIRN 362 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEA QGLVAGIN+ + D R ++YIGV+IDDL +KGV E Sbjct: 363 LFFAGQINGTTGYEEAGGQGLVAGINAHINCHGGDPFVLGRDEAYIGVLIDDLVTKGVDE 422 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYRI LR D+AD RLT LG + R + + + S ++ Sbjct: 423 PYRMFTSRAEYRILLRQDDADMRLTEKSYHLGLAKQDRYDLLKEKKASRDAIISFAENYS 482 Query: 483 LTSKNLSSTSISFKQDGKTRTAY-----EFLSYPDFSIQNLFSICPDAR--------KFS 529 + + ++S + G T A+ E + P +++N+ + P R Sbjct: 483 IKPQYINS---GLEALGTTPLAHGCKLIELIPRPQITLENIAELVPAFRTELDKVPVSRK 539 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 +IE +I Y+ Y R+ I A +I E I FDY+++ +LS E ++KL+ + P Sbjct: 540 EEIIEAAEILIKYSGYIRREQIIADKINRLENIHIKGKFDYNAIQSLSTEARQKLTRIDP 599 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKK 615 + QAS+I G++P+ +N+LL+ + + Sbjct: 600 DTIAQASRIPGISPSDINILLVMLGR 625 >gi|308189647|ref|YP_003922578.1| glucose inhibited division protein A [Mycoplasma fermentans JER] gi|307624389|gb|ADN68694.1| glucose inhibited division protein A [Mycoplasma fermentans JER] Length = 617 Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust. Identities = 257/622 (41%), Positives = 358/622 (57%), Gaps = 18/622 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 YD +VIGGGHAG EAA A T LI+ +G M CNP+IGG KG + REID Sbjct: 9 HKYDAVVIGGGHAGLEAAFALAHKNHKTVLISLNKERLGMMPCNPSIGGPAKGIITREID 68 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ-- 121 AL G+ G AD + IQ ++LN KGPAVR R Q D+E Y +L + NLD+I+ Sbjct: 69 ALGGMQGLWADLSMIQLKMLNQSKGPAVRALRAQIDKEKYMKIALEYVLKEPNLDLIEDI 128 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 E N++K I + + ++ V+TTGT++ I G + +G + + Sbjct: 129 AEEILVNSKKEF-KGIKLANGDIVEAEVCVVTTGTYMDSRILRGDVIKISGPDNEKTTPK 187 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L S + F RLKTGTP R+ +I + + E++ + + FS ++ RQI C Sbjct: 188 LSASLKEHGFIIQRLKTGTPPRIFSDSIDYSQVEQEVLSDTNLSFSSRSNVKLPRQIACY 247 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T T ETH+II EN+ SA+Y G IK GPRYCPS+EDKIV+F + HQIF EPE + Sbjct: 248 LTYTTPETHKIIEENLTKSAMYGGIIKGIGPRYCPSVEDKIVKFPSKERHQIFFEPETAD 307 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 + Y NG+ST++P E+Q IR+IPGL+K I + YAIEYD I+P +L PTLETK I Sbjct: 308 GSITYVNGLSTSMPVEVQELMIRSIPGLQKCKIQKYAYAIEYDAIDPLQLKPTLETKIIK 367 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 + AGQINGT+GYEEAAAQGL+AGIN+A K D I R +YIGV+IDDL +KG Sbjct: 368 NFYTAGQINGTSGYEEAAAQGLIAGINAALNLEKKDGIVILRNHAYIGVLIDDLVTKGTK 427 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRM TSRAEYR+ LR DNAD RL G K+G I + ++ K I++Y + ++ L Sbjct: 428 EPYRMLTSRAEYRLLLRNDNADIRLAEYGYKIGLIDKH---QYQKVIKKYELIDQEIQRL 484 Query: 482 VLTSKNLSSTSISFKQDGKTR--TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 T LSS + G T + + L+ P ++ P + +++V RL Sbjct: 485 HTTY--LSSKDPVAIKYGITTGISLLQTLARPAVDPYDIIHDFPYLEELTTMV--RLH-- 538 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y +Q +A + E IP+D DY+ + ++ E K+KL +KP + QAS+I Sbjct: 539 ----GYIEKQKSDANKAVRLENYKIPEDLDYNKINNIATEAKQKLIKVKPTTIGQASRIS 594 Query: 600 GMTPAALNLLLIYIKKNTVKLN 621 G+ PA + +L+ Y++ K N Sbjct: 595 GINPADIQMLMFYLETTRKKNN 616 >gi|218283640|ref|ZP_03489602.1| hypothetical protein EUBIFOR_02194 [Eubacterium biforme DSM 3989] gi|218215700|gb|EEC89238.1| hypothetical protein EUBIFOR_02194 [Eubacterium biforme DSM 3989] Length = 618 Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust. Identities = 234/618 (37%), Positives = 354/618 (57%), Gaps = 9/618 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIG GHAG EA ++++ TA++T IGSM CNP++GG KG +VREID Sbjct: 3 KMYDVIVIGAGHAGIEACLASSRMNKKTAIVTLSKDMIGSMPCNPSVGGPAKGIVVREID 62 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G+M AD +QF++LN KGP V R Q+D+ Y+ M+ + Q++LD+I+ Sbjct: 63 ALGGMMPIAADKTALQFKMLNTTKGPGVWSLRVQSDKIAYKRFMKEALEKQDHLDIIEAA 122 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 + + ++D + I TVVLT GT++ + G +G N+L Sbjct: 123 CKSVVIKDGKAIGVELEDGTFIESKTVVLTAGTYMTSNVLRGHTSTVSGPEEQRTVNTLS 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT----NRQIE 239 S T RLKTGTPAR+ TI + K E Q + + FS T+ +Q Sbjct: 183 KSLRDAGIRTFRLKTGTPARVKMDTIDFSKAEPQPGTNQFLRFSETTNPEDVLPFEKQEI 242 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C + T +TH II ++ SA+YSG +K GPRYCPSIEDK+VRF ++ HQ+FLEPE Sbjct: 243 CHLIYTQPKTHEIIHTHLHDSAMYSGLVKGVGPRYCPSIEDKLVRFADKERHQLFLEPES 302 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 D +Y G ST++P ++Q + + ++PGLE I + YAIEYD I+P ++ P +E+K Sbjct: 303 KELDTIYIQGFSTSMPIDVQEEMVHSLPGLEHCVIEKYAYAIEYDAIDPLQMKPNMESKI 362 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 + LF AGQ+NGT+GYEEAA QGL+AG N+A K + + R ++YIGVM+DDL +KG Sbjct: 363 VENLFTAGQVNGTSGYEEAAGQGLMAGANAALKVDGKEPFVLRRDEAYIGVMLDDLCTKG 422 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYR+ TSRAEYR+ LR DNAD RL G ++G + + R F ++ R L Sbjct: 423 TKEPYRLLTSRAEYRLLLRHDNADQRLLEKGYEIGLVSQERYDAFKNKMEAIEVAREELS 482 Query: 480 SLVLTSKNLSS---TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 + + + S+ F+ +A + + P +++ L + + E++ Sbjct: 483 NAHIKPNSDVDEYLKSLGFEPLAHGCSALDLIKRPKITVKGLAKYT--GLDYEDQINEQI 540 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I++ YA Y + +AK ++ EK + D DY ++ LS E ++KL+ ++P L QAS Sbjct: 541 EIQTKYAGYIAKAKRDAKHLQQMEKMKLAHDLDYENMDNLSLEARQKLTEIRPLTLGQAS 600 Query: 597 KIEGMTPAALNLLLIYIK 614 +I G+ P+ + +L + +K Sbjct: 601 RISGINPSDIAILAMRVK 618 >gi|148377441|ref|YP_001256317.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Mycoplasma agalactiae PG2] gi|205831536|sp|A5IXW3|MNMG_MYCAP RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|148291487|emb|CAL58872.1| Glucose inhibited division protein A [Mycoplasma agalactiae PG2] Length = 613 Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust. Identities = 251/626 (40%), Positives = 358/626 (57%), Gaps = 26/626 (4%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +N+ YD IVIGGGHAG EAA + G +T L+T + +G M CNP+IGG KG + RE Sbjct: 1 MNKKYDAIVIGGGHAGLEAAFAISHKGRNTLLLTFNSKKLGMMPCNPSIGGPAKGIITRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G+ G AD A IQ ++LN+ KGPAVR R Q D+E Y +L Q NL++++ Sbjct: 61 IDALGGMQGLWADLATIQLKMLNLSKGPAVRALRAQIDKEKYSQLAYEYVLKQPNLELLE 120 Query: 122 GEVAGFNTEKN-IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 G ++N +++++ +I V+TTGT++ I G+ +G + + Sbjct: 121 GVAEEVIVDENGYFKGVLVENIGLIEAKVCVITTGTYMNSRILRGQDITTSGPDNEKTTP 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 L S K F RLKTGTP R+ +I +D+ E++ + I FS ++ +QI C Sbjct: 181 KLSASLAKLGFTLQRLKTGTPPRIYSDSINFDEVEQEVLSDVNISFSSRSNLKKPKQIAC 240 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +T T ETHRII ENI S +YSG I+ GPRYCPS+EDKIV+F ++ HQIF EPE Sbjct: 241 YLTYTTPETHRIIEENIHRSPMYSGVIEGIGPRYCPSVEDKIVKFPDKERHQIFFEPETA 300 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + + + NG+ST++P ++Q I++IPGL + + YAIEYD ++P +L +LETK + Sbjct: 301 DGAITHVNGLSTSMPIDVQELMIKSIPGLRNAKVQKWAYAIEYDALDPLQLKESLETKLV 360 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 LF AGQINGT+GYEEAAAQGL+AGIN+A K D I R YIGV+IDDL +KG Sbjct: 361 HNLFTAGQINGTSGYEEAAAQGLIAGINAALKLEDKDPIVILRNHGYIGVLIDDLVTKGT 420 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIG-ERRQKRFAKY------IQEYNF 473 EPYRM TSRAEYR+ LR DNAD+RL+ G I E QK KY IQ N Sbjct: 421 KEPYRMLTSRAEYRLLLRNDNADDRLSEYAYNSGMISKEEYQKVLDKYKLIDDEIQRLNT 480 Query: 474 LRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVI 533 KS V N+++ S T +S PD ++ P + +++V Sbjct: 481 TYLSGKSDVALKYNITNGS----------TLLNVISRPDVDPSDIIPNFPYLEEITTMV- 529 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 RL Y +Q +A + E IP+D +Y + ++ E ++K ++P + Sbjct: 530 -RLH------GYIEKQKSDANKAVRLENLKIPEDLNYLDVKNIAIEARQKFEKIRPATIG 582 Query: 594 QASKIEGMTPAALNLLLIYIKKNTVK 619 QAS+I G+ PA + +L+ +++ K Sbjct: 583 QASRISGINPADIQMLMFHLESRNKK 608 >gi|313678731|ref|YP_004056471.1| glucose-inhibited division protein A [Mycoplasma bovis PG45] gi|312950831|gb|ADR25426.1| glucose-inhibited division protein A [Mycoplasma bovis PG45] Length = 613 Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust. Identities = 249/622 (40%), Positives = 359/622 (57%), Gaps = 28/622 (4%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +N+ YD IVIGGGHAG EAA + G T L+T + +G M CNP+IGG KG + RE Sbjct: 1 MNKKYDAIVIGGGHAGLEAAFAISHKGHKTLLLTFNSKKLGMMPCNPSIGGPAKGIITRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G+ G AD A IQ ++LN+ KGPAVR R Q D+E Y +L Q NLD+++ Sbjct: 61 IDALGGMQGLWADLATIQLKMLNLSKGPAVRALRAQIDKEKYSELAYEYVLKQPNLDLLE 120 Query: 122 GEVAGFNTEKN-IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 G + N +++++ I V+TTGT++ I G+ +G + + Sbjct: 121 GVAEEILVDDNGYFKGVLVENIGKIDAKVCVITTGTYMNSRILRGQDITTSGPDNEKTTP 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 L S K F RLKTGTP R+ +I +D+ E++ + I FS ++ +QI C Sbjct: 181 KLSASLAKLGFTLQRLKTGTPPRIYSDSINFDEVEQEVLSDVNISFSSRSNLKMPKQIAC 240 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +T T ETH+II ENI S +YSG I+ GPRYCPS+EDKIV+F ++ HQIF EPE Sbjct: 241 YLTYTTPETHKIIEENIHRSPMYSGVIEGIGPRYCPSVEDKIVKFPDKERHQIFFEPETA 300 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + + Y NG+ST++P ++Q I++IPGL + + YAIEYD ++P +L +LETK + Sbjct: 301 DGAITYVNGLSTSMPIDVQELMIKSIPGLRNARVQKWAYAIEYDALDPLQLKESLETKLV 360 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 LF AGQINGT+GYEEAAAQGL+AGIN+A K + I R YIGV+IDDL +KG Sbjct: 361 PNLFTAGQINGTSGYEEAAAQGLIAGINAALKLEDKEPIVILRNHGYIGVLIDDLVTKGT 420 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRM TSRAEYR+ LR DNAD+RL+ K G I + K I +Y + + Sbjct: 421 KEPYRMLTSRAEYRLLLRNDNADDRLSEYAYKSGMIS---NDEYQKVIDKYKLIDDEI-- 475 Query: 481 LVLTSKNLSSTSISFKQDGKTR-------TAYEFLSYPDFSIQNLFSICPDARKFSSLVI 533 + L+ST +S K D + T +S PD ++ P + +++V Sbjct: 476 -----QRLNSTHLSGKSDVALKYNITNGSTLLNVISRPDVDPNDIIPDFPYIEEITTMV- 529 Query: 534 ERLQIESSYAAYTGRQMIEA-KEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 RL Y +Q +A K ++ E R IP+D +Y + ++ E ++K ++P + Sbjct: 530 -RLY------GYIEKQKSDANKAVRLENLR-IPEDLNYFEVKNIAIEARQKFEKIRPATI 581 Query: 593 LQASKIEGMTPAALNLLLIYIK 614 QAS+I G+ PA + +L+ +++ Sbjct: 582 GQASRISGINPADIQMLMFHLE 603 >gi|327490313|gb|EGF22100.1| glucose inhibited division protein A [Streptococcus sanguinis SK1058] Length = 495 Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust. Identities = 221/462 (47%), Positives = 296/462 (64%), Gaps = 2/462 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYD+IVIG GHAG EA+ A+++G L T + M CNP+IGG KG +VRE+DA Sbjct: 32 SYDIIVIGAGHAGVEASLAASRMGCKVLLATINIEMLAFMPCNPSIGGSAKGIVVREVDA 91 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M + D + IQ ++LN KGPAVR R QAD+E+Y M++ + +QENL + Q + Sbjct: 92 LGGEMAKNIDKSYIQMKMLNTGKGPAVRALRAQADKEVYSKEMRKTVENQENLTLRQTMI 151 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + + V++TTGT LRG I IG LK +G + L + Sbjct: 152 NEILVEDGKVIGVKTATHQEYAAKAVIVTTGTALRGEIIIGDLKYSSGPNHSLAAIPLAD 211 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGI 242 + F+ GR KTGTP R+ +I +D TE Q DE+ FS+ + + Q+ C + Sbjct: 212 NLRDLGFEIGRFKTGTPPRVKASSINYDVTEIQPGDEKANHFSYTSRDEDYVKDQVPCWL 271 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN E+H II N+ + ++SG +K GPRYCPSIEDKIVRF ++ HQ+FLEPEG +T Sbjct: 272 TYTNAESHEIIQNNLHRAPMFSGIVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRDT 331 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q + +I GLE ++R GYAIEYD I P +L TLETKKISG Sbjct: 332 EEVYVQGLSTSLPEDVQKDLVHSIKGLENAEMMRTGYAIEYDMIMPHQLRATLETKKISG 391 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQ NGT+GYEEAA QG++AGIN+A K + R+D YIGVMIDDL +KG +E Sbjct: 392 LFTAGQTNGTSGYEEAAGQGIIAGINAALKIQGKPELILKRSDGYIGVMIDDLVTKGTVE 451 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF 464 PYR+ TSRAEYR+ LR DNAD RLT +G ++G + + R RF Sbjct: 452 PYRLLTSRAEYRLILRHDNADMRLTEMGREIGLVDDERWARF 493 >gi|205375717|sp|B1ZWP4|MNMG_OPITP RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A Length = 634 Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust. Identities = 246/628 (39%), Positives = 349/628 (55%), Gaps = 39/628 (6%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV G GHAG EA+ AA++GA T L+T T+G MSCNPAIGG KG +VREIDAL Sbjct: 8 FDVIVCGAGHAGIEASLAAARVGAFTLLLTGNLDTVGQMSCNPAIGGQAKGQIVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN KGPAV+ PR Q D++ Y+ ++ + Q +L + Q V Sbjct: 68 GGEMAINTDVTGIQFRLLNHTKGPAVQSPRAQCDKKAYQFRLKHTLELQPHLQLFQATVT 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 G + + + TVV+TTGTFLRG++HIG K GR+GD + +L S Sbjct: 128 GLIFDGAKVIGCRTNLDIEFYGRTVVVTTGTFLRGLMHIGSNKNEGGRLGDFSARTLSGS 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN---------- 235 + + R KTGTP RL G+++ + K E+Q D F+F + Sbjct: 188 LQEAGIELRRFKTGTPPRLLGRSLDFSKMEEQKGDANPTFFAFHDTREDGGVFHVEHGKP 247 Query: 236 ---------RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFG 286 Q+ C +T T T ++ EN+ SA+Y G+I+ GPRYCPSIEDK VRF Sbjct: 248 QGEAIPPGCEQVSCWMTYTTARTAELVRENLSRSAMYGGEIEGVGPRYCPSIEDKFVRFA 307 Query: 287 ERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI 346 ++ H +FLEPEG TD Y NG+ST+LP ++Q + + +IPGL + ++RP YA+EYDY Sbjct: 308 DKPRHLLFLEPEGRGTDEFYVNGLSTSLPFDVQLELVHSIPGLGEAVLLRPAYAVEYDYA 367 Query: 347 NPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDS 406 P +L +LE++++ GLFLAGQINGT+GYEEAA QGL+AG+N+ARK + R ++ Sbjct: 368 PPTQLKMSLESQRVEGLFLAGQINGTSGYEEAAGQGLIAGVNAARKGRGEQPLVLGRHEA 427 Query: 407 YIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAK 466 YIGV+IDDL +KG EPYRMFTSRAE+R+ L +A+ RL + R A+ Sbjct: 428 YIGVLIDDLVTKGTEEPYRMFTSRAEHRLLLNHGSAELRLLHHASGCKLLNVNRLDNIAR 487 Query: 467 YIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDAR 526 + L+S + L+ I +Q+ + E + Sbjct: 488 KKEAIESWVRRLESERTSEGTLA--EIIRRQNARAELPSELM------------------ 527 Query: 527 KFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSI 586 + S V + + Y+ Y R+ ++ E IP DY +P L E KL+ Sbjct: 528 RQSKPVRDEVLYRVLYSGYWEREQRHIDKLAQIEAVRIPAAIDYLRIPGLRRESALKLAA 587 Query: 587 LKPFNLLQASKIEGMTPAALNLLLIYIK 614 +P L QAS+I G+ PA +++L++ IK Sbjct: 588 QRPDTLGQASRISGVNPADVSILMVLIK 615 >gi|104295013|gb|ABF72028.1| glucose-inhibited division A family protein [Musa acuminata] Length = 638 Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust. Identities = 251/566 (44%), Positives = 341/566 (60%), Gaps = 14/566 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 I YDVIV+GGGHAGCEAA AA+LGA T L+T I CNPA+GG K LV E Sbjct: 76 IEEQYDVIVVGGGHAGCEAALAAARLGARTLLLTLNIDRIAWQPCNPAVGGPAKSQLVHE 135 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DAL G +G++AD +Q RVLN KGPAVR R Q D+ Y L M++ + S NL + + Sbjct: 136 VDALGGEIGKIADRCYLQKRVLNRSKGPAVRALRAQTDKREYALEMKKVVESTTNLFIRE 195 Query: 122 GEVAGFNTEKNIISSIVMQDNSM-IRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 V KN V M +VVLTTGTF+ G I +G+ +PAGR G+S S+ Sbjct: 196 AMVTNILVGKNDTVEGVSTFFGMNFYAPSVVLTTGTFMSGKIWVGRTSMPAGRAGESASH 255 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIE 239 L S + F+T RLKTGTPAR+D +++ + E Q DE + FSF D + Q+ Sbjct: 256 GLTESLQQLGFETDRLKTGTPARVDYRSVNFSGLEPQHGDEEVNWFSFDPDYHVEREQMC 315 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +TRT +TH++I +N+ + Y G +++ GPRYCPSIEDKIVRF +++ HQIFLEPEG Sbjct: 316 CYLTRTTKDTHQLIKDNLHETPTYGGWVEAKGPRYCPSIEDKIVRFQDKDSHQIFLEPEG 375 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 +Y G ST LPE +Q +RT+PGLE ++RP YA+EYDY+ + +L TKK Sbjct: 376 RTVPDLYVQGFSTGLPERLQLTLLRTLPGLENCLMLRPAYAVEYDYLPAHQCSRSLMTKK 435 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 + GLF +GQINGTTGYEEAAAQGL++GIN+AR S+ I R SYIG +IDDL +K Sbjct: 436 LEGLFFSGQINGTTGYEEAAAQGLISGINAARHSDGKSIIILERESSYIGTLIDDLVTKD 495 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR----QKRFAKYIQEYNFLR 475 + EPYRM TSR+E+R+ LR DNAD+RLTP+G +G I ERR Q + A+ ++E L+ Sbjct: 496 LREPYRMLTSRSEHRLLLRADNADSRLTPLGWDIGLIDERRWNLYQLKQARILEEKERLK 555 Query: 476 SLLKS---LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV 532 S+ S V +LS + + + L P + L S + Sbjct: 556 SVRISGGDFVAEVSHLSGQPVK-----DSSSLESILKKPHVEYKVLDKHGYGNELLSRIE 610 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKF 558 E ++I+ YA + RQ + +++ F Sbjct: 611 KECVEIDIKYAGFIARQRSQLQQVNF 636 >gi|323455702|gb|EGB11570.1| hypothetical protein AURANDRAFT_58702 [Aureococcus anophagefferens] Length = 663 Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust. Identities = 275/660 (41%), Positives = 380/660 (57%), Gaps = 47/660 (7%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+VIGGGHAGCEAAA AA+ GA TAL+T + T+G MSCNP+IGG+GKGHLVRE+DAL Sbjct: 5 YDVVVIGGGHAGCEAAAAAARGGARTALVTQRVDTVGEMSCNPSIGGIGKGHLVREVDAL 64 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILS--QENLDVIQG- 122 G+MGR DAAGI FR+LN +KGPAV GPR QADR+LYR M+ EI S ENLDV++ Sbjct: 65 GGVMGRAIDAAGIHFRMLNRRKGPAVWGPRAQADRDLYRAFMRGEIASGAYENLDVLEAS 124 Query: 123 ------EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRM-- 174 E G ++ + ++ + S V+TTGTFLRG I +G+ PAGR Sbjct: 125 AEDVLFEDRGGERRVRAVAVTIDEEPVEVATSACVITTGTFLRGTIWLGQESRPAGRFVR 184 Query: 175 --GDSPSNSLFNSFMKFDFD--TGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT 230 G S L ++ D GRLKTGTP RLDG+TI W K Q +++ FS+ Sbjct: 185 DDGTGGSGDLSGDTLELDLGLPLGRLKTGTPPRLDGRTIDWSKCVAQPSEDPPFAFSYGN 244 Query: 231 DKITNR-QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERN 289 + + R + C T TN TH I+ A S + GPRYCPS+ K+ RFG+R+ Sbjct: 245 AEASPRGTVACARTATNERTHDIVRAEAHTLAPPS--VSGTGPRYCPSLYKKVERFGDRS 302 Query: 290 GHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPK 349 H ++LEPEGLNTD+VYPNG+S A P ++Q + +R+I GLE I++PGY +EYD+++P+ Sbjct: 303 SHVVWLEPEGLNTDLVYPNGLSGAFPLDVQERIVRSIAGLENAVIVQPGYDVEYDFVDPR 362 Query: 350 ELFPTLETKKISGLFLAGQINGTTGYEE-------AAAQGLVAGINSARKSNKLDCICFS 402 L L KK GLFLAGQI GTTGYEE A A +A + ++ Sbjct: 363 SLDHGLGVKKARGLFLAGQICGTTGYEEAAALGLVAGANAALAAGDRDAAASARRRFVVG 422 Query: 403 RTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMK---------- 452 R + YIGV++DDL ++G +EPYRMFTSRAEYR++LR DNAD RLT +G Sbjct: 423 RDEGYIGVLVDDLVTRGTMEPYRMFTSRAEYRLALRADNADLRLTRLGAARVPGLVEPDR 482 Query: 453 -LGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYP 511 C E R + A + LR ++ + T+ ++A + L+ P Sbjct: 483 LAAC--EARARHVADAKARCDALRFAPEAWAPAFLSADETNRDDHSKRSHKSASQLLAMP 540 Query: 512 DFSIQNLFSICPDARKFSSLVIERLQIES-----SYAAYTGRQMIEAKEIKFEEKRLIPK 566 +++ + ++ A + L+IE ++ YAAY R + K + IP Sbjct: 541 HATLEGVLALA--AAQGEELLIEADARDTVAALCKYAAYLDRMDRDVAAYKRNDATKIPP 598 Query: 567 DFDYSS--LPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVKLNEIV 624 D DYS+ LPALS E +EKL +P +A++I G+TPA+L L ++ + + + + Sbjct: 599 DLDYSAANLPALSAEEREKLGAARPHTFAEAARISGVTPASLVYLYNHVANGSKRPSAVA 658 >gi|28190321|gb|AAO33053.1| glucose-inhibited division protein [Buchnera aphidicola] Length = 532 Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust. Identities = 245/533 (45%), Positives = 335/533 (62%), Gaps = 7/533 (1%) Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G+M + +D +GIQFR+LN +KGPAVR R Q DR++Y ++ I SQ+ + +++ Sbjct: 1 IDALGGVMAKASDKSGIQFRILNSRKGPAVRSTRAQVDRKIYSQNIKDIIKSQKKIFLLE 60 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 GEV + I+M D + TV+LTTGTFL G I+IG GR+ D+ S Sbjct: 61 GEVKDLIIKNYCSKGIIMCDGTQFLSQTVILTTGTFLGGKIYIGLXSFEGGRIDDNASIH 120 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIEC 240 L N + + RLKTGTP RLD +TI ++ + Q +D L FSF + + + +QI C Sbjct: 121 LANRLRELPINVSRLKTGTPPRLDKRTINFELLQSQHSDSPLPVFSFTGNILDHPKQIPC 180 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH II +N+K SAIYSG +K GPRYCPSIEDKI+RF ++ HQIFLEP GL Sbjct: 181 YITHTNSKTHSIIKDNLKFSAIYSGILKGIGPRYCPSIEDKIIRFSDKLSHQIFLEPGGL 240 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + +YPNG+ST+LPE+IQ + IR+I GLEK IIRPGYA+EYDY +P+ L TLE+K I Sbjct: 241 SGIEIYPNGVSTSLPEKIQKKMIRSIQGLEKAKIIRPGYAVEYDYFDPRHLKLTLESKFI 300 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 SGLFLAGQINGTTGYEEAA+QGL+AGIN++ + + R ++YIGV+IDDL +KG Sbjct: 301 SGLFLAGQINGTTGYEEAASQGLLAGINASLCTLNKNEWFPKRNEAYIGVLIDDLCTKGT 360 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFT+RAE+R+ LR DNAD RLT G KLG I E R KRF + ++ + LKS Sbjct: 361 KEPYRMFTARAEHRLILREDNADLRLTEQGRKLGLIDEGRWKRFNQKLENIESELTRLKS 420 Query: 481 LVLT----SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VIER 535 L + N T ++ + K+ A + L P+ + L S+ + ++ Sbjct: 421 LTINPNSKDANTLXTFLNINLNIKS-NAKDLLKRPEITYNYLMSLKQFGPGIQDVEAAQQ 479 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 ++I+ Y Y RQ E + +E L+ +Y + LSNE+ KL+ K Sbjct: 480 IEIQEKYKGYILRQQHEITQNLKKENILLSVINNYQEVKGLSNEVIMKLNYYK 532 >gi|257466622|ref|ZP_05630933.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Fusobacterium gonidiaformans ATCC 25563] gi|315917777|ref|ZP_07914017.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG 1 [Fusobacterium gonidiaformans ATCC 25563] gi|313691652|gb|EFS28487.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG 1 [Fusobacterium gonidiaformans ATCC 25563] Length = 614 Score = 436 bits (1120), Expect = e-120, Method: Compositional matrix adjust. Identities = 250/617 (40%), Positives = 366/617 (59%), Gaps = 10/617 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DVIV+GGGHAGCEAA +A+LG TA+IT +I MSCNP+IGG GK +LV EID Sbjct: 2 QEFDVIVVGGGHAGCEAALASARLGLKTAMITLYLDSIAMMSCNPSIGGPGKSNLVTEID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 L G MGR D +Q + LN KGPA R R QAD+ LYR M+ + ENL ++Q Sbjct: 62 ILGGEMGRHTDQFNLQLKHLNESKGPAARVTRGQADKFLYRTNMRLTLEHTENLSILQDC 121 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V +++ + + + + +V+L TGTFL+G + IG + AGR G+S + L Sbjct: 122 VEKLLVQEDEVYGVKTRLGIEYKAKSVILCTGTFLKGKVVIGDITYSAGRQGESAAEKLS 181 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + + R +T TP R+D K+I + K ++ ++ FS T+K N + +T Sbjct: 182 ENLRELGLQVERYQTATPPRIDKKSIDFSKLKELHGEKHPRYFSIFTEKKENTIVPTWLT 241 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +T E +++S I SG I+++GPR+CPSI+ K++ F E+ HQIFLE E L++D Sbjct: 242 YTNEKTLEKTKEMLQYSPIVSGIIETHGPRHCPSIDRKVLNFPEKTDHQIFLEMESLDSD 301 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y NG +TA+P Q + + TI GLE+ I+R GYA+EYDY+ +L+P+LE KKISGL Sbjct: 302 EIYVNGFTTAMPPFAQDEILHTISGLEQAKIMRYGYAVEYDYMPAFQLYPSLENKKISGL 361 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGT+GYEEAAAQGLVAGIN+ARK + I R+++YIGVMIDDL K EP Sbjct: 362 FCAGQINGTSGYEEAAAQGLVAGINAARKILGKNPIFIDRSEAYIGVMIDDLIHKKTPEP 421 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR----QKRFAKYIQEYNFLRSLLK 479 YR+ SR+EYR+ LR DNA RL ++G + + + +K QE L+++ Sbjct: 422 YRVLPSRSEYRLHLRFDNAFMRLYEKTKEIGLLTQEKLLLVEKAIQNVKQEVERLKTISI 481 Query: 480 SLVLTSKNLSSTSIS--FKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 S+ ++ L S F + K + ++ L I PD +F IE + Sbjct: 482 SMQEANQFLEKKQCSDLFSKGVKIADILKKKEITYLDLKELIEI-PDYPEFVHNQIETIL 540 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 + +Q+++ KE+ E +LIPKDFD+SS+ +SN L +KP ++ +A + Sbjct: 541 KYEIFMEREEKQILKFKEL---ENQLIPKDFDFSSVKGISNIALSGLLEVKPLSIGEAGR 597 Query: 598 IEGMTPAALNLLLIYIK 614 I G+T L LL+ +++ Sbjct: 598 ISGVTGNDLALLIAHLR 614 >gi|315932332|gb|EFV11275.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Campylobacter jejuni subsp. jejuni 327] Length = 516 Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust. Identities = 223/454 (49%), Positives = 294/454 (64%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EA+A AA++G T L+T IG+ SCNPAIGGL KGHLV+E+DA+ Sbjct: 2 FDVIVIGGGHAGVEASAAAARMGKKTLLLTILIEQIGAASCNPAIGGLAKGHLVKELDAM 61 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLMG + D AGIQFR+LN KG AV+G R Q D + YR+ ++ ++L NL++ Q + + Sbjct: 62 GGLMGEITDEAGIQFRILNESKGVAVQGSRAQIDMDKYRIIVRNKLLKLPNLEISQEQAS 121 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + + V+LTTGTFL G+IH+G+ K+ AGR+G+ S +L N Sbjct: 122 VLIVENDEVKGVKTNLENTYFAKKVILTTGTFLNGLIHVGENKLQAGRVGELASVNLGNY 181 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 GRLKTGT R+D K+I + E Q D FSF + Q+ C I RT Sbjct: 182 LQTLGLKMGRLKTGTCPRVDAKSIDFSVLEIQDGDVNPKAFSFRSRNFNPTQLPCYIART 241 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N TH II N + +++G I+ GPRYCPSIEDKI RF ++ H +F+EP+ ++ Sbjct: 242 NTTTHEIIKNNFYRAPLFTGQIEGVGPRYCPSIEDKINRFSDKESHHLFIEPQTIDATEY 301 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG ST+LP E+Q Q +R++ G E I R GYAIEYDYI P EL TLE KKI L+ Sbjct: 302 YINGFSTSLPYEVQTQMLRSVKGFENAKITRFGYAIEYDYIEPTELKHTLELKKIKNLYC 361 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAAAQG +AGIN++ + + + R ++YIGV+IDDL KG EPYR Sbjct: 362 AGQINGTTGYEEAAAQGFIAGINASLSIDMKEPLILRRDEAYIGVLIDDLVVKGTKEPYR 421 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGER 459 MFTSRAE+R+ LR +NA RL G LG + E+ Sbjct: 422 MFTSRAEFRLLLREENAILRLGKYGYDLGLLSEQ 455 >gi|219685822|ref|ZP_03540631.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Borrelia garinii Far04] gi|219672655|gb|EED29685.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Borrelia garinii Far04] Length = 493 Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust. Identities = 225/493 (45%), Positives = 314/493 (63%), Gaps = 6/493 (1%) Query: 131 KNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFD 190 +N I +V + + R S VVLTTGTFLRG I IG+ + GR+ + + L + + Sbjct: 2 RNEIKGVVTERGNKFRSSVVVLTTGTFLRGKIFIGEYRANMGRLAEFSAYGLDKTLLSLG 61 Query: 191 FDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTNLETH 250 F+ GRLKTGTPAR+ K++ + KTE QF D +IPFSF + Q+ C +T TN TH Sbjct: 62 FEMGRLKTGTPARIHKKSVDFSKTEVQFGDSDIIPFSFSNGNLDKSQLSCYVTYTNKRTH 121 Query: 251 RIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGI 310 II EN+ S +YSG+I GPRYCPSIEDKIV+F +++ HQIF+EPEG NT+ +Y NG+ Sbjct: 122 EIISENMHLSPLYSGEIVGNGPRYCPSIEDKIVKFKDKDRHQIFIEPEGFNTEEMYLNGL 181 Query: 311 STALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQIN 370 S++LPE IQ +FI +I GLE I RPGYA+EYDYINP EL+P LE+K++ GLF+AGQ N Sbjct: 182 SSSLPENIQQKFINSIEGLEHAIITRPGYAVEYDYINPIELYPNLESKRVKGLFVAGQTN 241 Query: 371 GTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSR 430 G++GYEEAAAQGL+AGIN+A + + +RT SYIGV+IDDL +KG EPYRMFTSR Sbjct: 242 GSSGYEEAAAQGLMAGINAALRLQNKKPMILTRTSSYIGVLIDDLVTKGTKEPYRMFTSR 301 Query: 431 AEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSS 490 AE+R++LR D +D RL IG LG + E R ++ + ++ LLK L+ K+++ Sbjct: 302 AEHRLNLRHDTSDKRLIKIGYDLGLVDEERYSKYLFKKRRVEEIKELLKQRRLSLKDVAD 361 Query: 491 TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQM 550 + + ++ Y L P S+ NL I P S +++E+++++ Y Y RQ Sbjct: 362 EQL---KKHVSKDFYHILKDPSISLDNLIKIDPSLSD-SKVILEQVELDVKYEGYINRQK 417 Query: 551 IEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLL 610 K++ E +P DF+Y + LS E +EK S ++P L QAS+I G+ + +L Sbjct: 418 DLIKKLNNLELVKLPFDFNYEIIEGLSREAREKFSKVQPATLAQASRIPGIRNTDITVLF 477 Query: 611 IYIK--KNTVKLN 621 IY KN V LN Sbjct: 478 IYFSNPKNKVVLN 490 >gi|156088059|ref|XP_001611436.1| glucose inhibited division protein A family protein [Babesia bovis] gi|154798690|gb|EDO07868.1| glucose inhibited division protein A family protein [Babesia bovis] Length = 711 Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust. Identities = 266/679 (39%), Positives = 375/679 (55%), Gaps = 73/679 (10%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALD 66 DV++IGGGHAGCEAAA +A++GA T LIT + TIG MSCNP++GG+GKG++V EIDALD Sbjct: 33 DVVIIGGGHAGCEAAAASARVGAKTLLITARKETIGEMSCNPSVGGIGKGNIVCEIDALD 92 Query: 67 GLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAG 126 G+MGR AD + + +LN +GPAVRGPR Q DR++Y A++R I + NL V +G V Sbjct: 93 GIMGRAADEGAVMYHLLNSSRGPAVRGPRAQTDRDVYARAVRRLINNYSNLHVEEGMVDD 152 Query: 127 FNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMG------DSPSN 180 + + +++ + I C +VV+TTGTFLRG H K IP GR + P+ Sbjct: 153 IVVDGGAVRGVILSNGRNINCKSVVVTTGTFLRGRCHRSKNLIPGGRFDRLNQNFELPAE 212 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM----TDKITNR 236 L ++F + T R KTGTP RL TI +D E Q++DE IPFS++ ++ + + Sbjct: 213 GLCSTFKRLGISTNRFKTGTPPRLKRDTINYDILEVQYSDEHPIPFSYLNVDTSNLLNHG 272 Query: 237 QIECGITRTNLETHRIIMENIKHSAIY-SGDIKSYGPRYCPSIEDKIVRFGERNGHQIFL 295 I+C TRT+ TH I+ EN+ Y SG GPRYCPS+ KI RF + N H ++L Sbjct: 273 VIQCYKTRTHKATHSIVRENLHLLPDYESGYGIGLGPRYCPSLPAKITRFPDVNHHIVWL 332 Query: 296 EPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTL 355 EPEG+++ +VYPNG+S A P+E+Q + +RTIPGLE V I PGY +EYDYI+ + L TL Sbjct: 333 EPEGVDSHLVYPNGLSGAFPQEVQLKLLRTIPGLENVEIDTPGYDVEYDYIDARLLKHTL 392 Query: 356 ETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKS-NKLDCICFSRTDSYIGVMIDD 414 E K I L+ AGQI GTTGYEEAA G+VAG N+A S N +R+D YIGV+IDD Sbjct: 393 EFKHIKQLYFAGQICGTTGYEEAAGMGIVAGCNAALSSLNTNKEFVLNRSDGYIGVLIDD 452 Query: 415 LTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFL 474 L KG EPYRMFTSRAE R+ LR DNAD R+ G+ I + +R ++Y + Sbjct: 453 LVRKGTNEPYRMFTSRAEDRLFLRIDNADLRMLKKGLYCELI--KNPERLNNIREKYVKV 510 Query: 475 RSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPD---------- 524 ++ + L ++ SFK +++ ++ L +I + +I + Sbjct: 511 QAAINRLRTIILPMNRWDPSFKSS-ESKNGWDMLGTSGMTIDRIEAIVNEYYPKGTIATV 569 Query: 525 ---------------------------ARKFSSLVIE-RLQIES------SYAAYTGRQM 550 A K S + E +QI + YA + RQ Sbjct: 570 CKHKMSTAENEGLAKAFETAEENLNTQANKISGKLTEYSMQIRNVIEARCKYAPFVERQA 629 Query: 551 IEAKEIKFEEKRLIPKDFDYSSLPA--------------LSNELKEKLSILKPFNLLQAS 596 + + I D +Y+ LS E E L+ +P + +A+ Sbjct: 630 KQMERTLRGGSVPICPDMEYTRYACFSDFNVCHREQFAFLSKEEVEVLNKYRPGTISEAA 689 Query: 597 KIEGMTPAALNLLLIYIKK 615 + G+TPA++ LL I K Sbjct: 690 DLPGVTPASITLLAAQIHK 708 >gi|315928776|gb|EFV08048.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Campylobacter jejuni subsp. jejuni 305] Length = 531 Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust. Identities = 223/454 (49%), Positives = 294/454 (64%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EA+A AA++G T L+T IG+ SCNPAIGGL KGHLV+E+DA+ Sbjct: 2 FDVIVIGGGHAGVEASAAAARMGKKTLLLTTLIEQIGAASCNPAIGGLAKGHLVKELDAM 61 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLMG + D AGIQFR+LN KG AV+G R Q D + YR+ + ++L NL++ Q + + Sbjct: 62 GGLMGEITDEAGIQFRILNESKGVAVQGSRAQIDMDKYRIITRNKLLKLPNLEISQEQAS 121 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + ++ V+LTTGTFL G+IH+G+ K+ AGR+G+ S +L N Sbjct: 122 VLIVENDEVKGVKTNLENIYFAKKVILTTGTFLNGLIHVGENKLQAGRVGELASVNLGNY 181 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 GRLKTGT R+D K+I + E Q D FSF + Q+ C I RT Sbjct: 182 LQTLGLKMGRLKTGTCPRVDAKSIDFSVLEIQDGDVNPKAFSFRSRNFNPTQLPCYIART 241 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N TH II N + +++G I+ GPRYCPSIEDKI RF ++ H +F+EP+ ++ Sbjct: 242 NTTTHEIIKNNFYRAPLFTGQIEGVGPRYCPSIEDKINRFSDKESHHLFIEPQTIDATEY 301 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG ST+LP E+Q Q +R++ G E I R GYAIEYDYI P EL TLE KKI L+ Sbjct: 302 YINGFSTSLPYEVQIQMLRSVKGFENAKITRFGYAIEYDYIEPTELKHTLELKKIKNLYC 361 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGTTGYEEAAAQG +AGIN++ + + + R ++YIGV+IDDL KG EPYR Sbjct: 362 AGQINGTTGYEEAAAQGFMAGINASLSIDMKEPLILRRDEAYIGVLIDDLVVKGTKEPYR 421 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGER 459 MFTSRAE+R+ LR +NA RL G LG + E+ Sbjct: 422 MFTSRAEFRLLLREENAILRLGKYGYDLGLLSEQ 455 >gi|257452997|ref|ZP_05618296.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Fusobacterium sp. 3_1_5R] gi|317059537|ref|ZP_07924022.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG 1 [Fusobacterium sp. 3_1_5R] gi|313685213|gb|EFS22048.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG 1 [Fusobacterium sp. 3_1_5R] Length = 614 Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust. Identities = 249/617 (40%), Positives = 365/617 (59%), Gaps = 10/617 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DVIV+GGGHAGCEAA +A+LG TA+IT +I MSCNP+IGG GK +LV EID Sbjct: 2 QEFDVIVVGGGHAGCEAALASARLGLKTAIITLYLDSIAMMSCNPSIGGPGKSNLVTEID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 L G MGR D +Q + LN KGPA R R QAD+ LYR M+ + ENL ++Q Sbjct: 62 ILGGEMGRHTDQFNLQLKHLNESKGPAARVTRGQADKFLYRTNMRLTLEHTENLSILQDC 121 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V +++ + + + + +V+L TGTFL+G + IG + AGR G+S + L Sbjct: 122 VEKLLVQEDEVYGVKTRLGIEYKAKSVILCTGTFLKGKVVIGDITYSAGRQGESAAEKLS 181 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + + R +T TP R+D K+I + K ++ ++ FS T+K N + +T Sbjct: 182 ENLRELGLQVERYQTATPPRIDKKSIDFSKLKELHGEKHPRYFSIFTEKKENTIVPTWLT 241 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +T E +++S I SG I+++GPR+CPSI+ K++ F E+ HQIFLE E L++D Sbjct: 242 YTNEKTLEKTKEMLQYSPIVSGIIETHGPRHCPSIDRKVLNFPEKTDHQIFLEMESLDSD 301 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y NG +TA+P Q + + TI GLE+ I+R GYA+EYDY+ +L+P+LE KKISGL Sbjct: 302 EIYVNGFTTAMPPFAQDEILHTISGLEQAKIMRYGYAVEYDYMPAFQLYPSLENKKISGL 361 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGT+GYEEAAAQGLVAGIN+ARK + I R+++YIGVMIDDL K EP Sbjct: 362 FCAGQINGTSGYEEAAAQGLVAGINAARKILGKNPIFIDRSEAYIGVMIDDLIHKKTPEP 421 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR----QKRFAKYIQEYNFLRSLLK 479 YR+ SR+EYR+ LR DNA RL ++G + + + +K QE L+++ Sbjct: 422 YRVLPSRSEYRLHLRFDNAFMRLYDKTKEIGLLTQEKLLLVEKAIQNVKQEVERLKTISI 481 Query: 480 SLVLTSKNLSSTSIS--FKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 S+ ++ L S F + K + ++ L I PD +F IE + Sbjct: 482 SMQEANQFLEKKQCSDFFSKGVKIADVLKKKEITYLDLKELIEI-PDYPEFVRNQIETIL 540 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 + +Q+++ KE+ E + IPKDFD+SS+ +SN L +KP ++ +A + Sbjct: 541 KYEIFMEREEKQILKFKEL---EHQFIPKDFDFSSVKGISNIALSGLLEVKPLSIGEAGR 597 Query: 598 IEGMTPAALNLLLIYIK 614 I G+T L LL+ +++ Sbjct: 598 ISGVTGNDLALLIAHLR 614 >gi|257462447|ref|ZP_05626860.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Fusobacterium sp. D12] gi|317060107|ref|ZP_07924592.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG 1 [Fusobacterium sp. D12] gi|313685783|gb|EFS22618.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG 1 [Fusobacterium sp. D12] Length = 615 Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust. Identities = 250/631 (39%), Positives = 362/631 (57%), Gaps = 38/631 (6%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +D+IV+GGGHAGCEAA +A+LG TA+IT +I MSCNP+IGG GK +LV EID Sbjct: 2 QEFDIIVVGGGHAGCEAALASARLGLKTAMITLYLDSIAMMSCNPSIGGPGKSNLVTEID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 L G M + D +Q + LN KGPA R R QAD+ LYR+ M+R + ENL ++Q Sbjct: 62 ILGGEMAKHTDHFNLQLKHLNESKGPAARVTRGQADKFLYRIHMRRVLEHTENLHLLQDC 121 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E IS + + + V+L TGTFL+G + IG + AGR G+S + L Sbjct: 122 VEEVLVENGHISGVKTRLGIQYKAKAVILCTGTFLKGKVVIGDIVYSAGRQGESSAEKLS 181 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + R +T TP RLD K+I + K ++ +E FS T K N+ + +T Sbjct: 182 ENLRALGLKVERYQTATPPRLDKKSIDFSKLKELHGEEYPRYFSIFTQKKKNKTVPTWLT 241 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +T E +++S I SG I+++GPR+CPSI+ K++ F ++ HQIFLE E L++D Sbjct: 242 YTNEKTLEKTKEMLQYSPIVSGIIETHGPRHCPSIDRKVLNFPDKTEHQIFLELESLDSD 301 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y NG +TA+P Q + + TI GLE I+R GYA+EYDY+ +L+P+LE KKISGL Sbjct: 302 EIYVNGFTTAMPPFAQEKILHTICGLEHAKIMRYGYAVEYDYVPAFQLYPSLENKKISGL 361 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGT+GYEEAAAQGL+AGIN+ RK + I R+++YIGVMIDDL K EP Sbjct: 362 FCAGQINGTSGYEEAAAQGLIAGINAGRKILQKSPIFIDRSEAYIGVMIDDLIHKKTPEP 421 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ SR+EYR+ LR DNA RL ++G + + +FL ++ ++ Sbjct: 422 YRVLPSRSEYRLHLRFDNAFMRLYEKTKEIGLLSPEK----------ISFLEEAIEKVIQ 471 Query: 484 TSKNLSSTSISFKQDG---KTRTAYEF---------------LSYPDFSIQNLFSICPDA 525 K L + SIS ++ K + +F +SY D CP+ Sbjct: 472 EVKRLKNISISMQEANQFLKNKNCMDFFSKGVKIADILKRKEISYLDLEELIELPECPE- 530 Query: 526 RKFSSLVIERLQIES--SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEK 583 R QIE+ Y + R+ + + K E++LIP++FD+SS+ +SN Sbjct: 531 -------FVRNQIETILKYEIFMEREEKQILKFKQLEQQLIPQNFDFSSVKGISNIALSG 583 Query: 584 LSILKPFNLLQASKIEGMTPAALNLLLIYIK 614 L +KP ++ +A +I G+T L LL+ +++ Sbjct: 584 LLEVKPLSIGEAGRISGVTGNDLALLIAHLR 614 >gi|269115303|ref|YP_003303066.1| glucose inhibited division protein A [Mycoplasma hominis] gi|268322928|emb|CAX37663.1| Glucose inhibited division protein A [Mycoplasma hominis ATCC 23114] Length = 606 Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust. Identities = 241/613 (39%), Positives = 356/613 (58%), Gaps = 12/613 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + ++D IVIGGGHAG EA AK AL+T + + + CNP+IGG KG + RE Sbjct: 1 MTNNFDAIVIGGGHAGIEATYALAKRNFKVALVTLNINRLAMLPCNPSIGGSAKGIITRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G+ G AD A IQ ++LN KGPAV R Q D+E Y + ++I Q+N+ +IQ Sbjct: 61 IDALGGVQGFFADNAMIQIKMLNTSKGPAVWSLRAQIDKEKYSEIILKDIEKQKNITLIQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 E + E I ++ + V++TTG ++ I G+ G G+ S++ Sbjct: 121 DEASDLIVEDGTCVGIETLEHGKLYSKVVIMTTGVYMNSRILRGENIKYDGPDGEKTSST 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L + K+ F+ RLKTGTP R+ +I + K EK+ ++ + FS ++K + Q C Sbjct: 181 LSKNLKKYGFEIIRLKTGTPCRIYTDSIDFSKVEKEVLEKNELCFSSRSNKKLDEQTCCY 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T T L+T II++N+K S++YSG I GPRYCPS+EDKIVRF E++ H IF EPE Sbjct: 241 LTHTTLKTKEIILKNLKRSSLYSGIIIGIGPRYCPSVEDKIVRFQEKDTHHIFFEPETAR 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 D++Y NG+ST++PE++Q + I +IPGLE + + GYAIEYD INP L+ +LE+K + Sbjct: 301 GDIMYINGLSTSMPEDVQDEMIASIPGLEHARVQKYGYAIEYDAINPLNLYKSLESKILK 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 F AGQ NGT+GYEEAAAQGL+AGIN+A K + L+ + R D YIGV+IDD+ +KG Sbjct: 361 NFFSAGQPNGTSGYEEAAAQGLIAGINAANKLDNLEPLIIKRNDGYIGVLIDDIVTKGTN 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRM TSRAE+R+ LR DN D RL I + +E++ + K + Sbjct: 421 EPYRMLTSRAEFRLLLRNDNVDERLYKYAYDNKMISK----------EEHDRIEEKYKII 470 Query: 482 VLTSKNLSSTSISFKQD-GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 T + L + +S K D G+ +SY + N D + I+ + I+ Sbjct: 471 AETVEKLKNEYVSSKSDVGQKYNVTNGMSYLKL-LSNPEVDPVDILGSNFPYIDEITIQV 529 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y +Q A ++ E+ +PKD DY S+ L+ E ++KL ++P + QA++I G Sbjct: 530 RLYGYLKKQESAADKMLRLEQLKLPKDIDYWSVDNLATEARQKLDKIRPETIGQAARISG 589 Query: 601 MTPAALNLLLIYI 613 + PA + +L+ Y+ Sbjct: 590 INPADIQMLIFYL 602 >gi|182412705|ref|YP_001817771.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Opitutus terrae PB90-1] gi|177839919|gb|ACB74171.1| glucose inhibited division protein A [Opitutus terrae PB90-1] Length = 625 Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust. Identities = 244/626 (38%), Positives = 347/626 (55%), Gaps = 39/626 (6%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDG 67 +IV G GHAG EA+ AA++GA T L+T T+G MSCNPAIGG KG +VREIDAL G Sbjct: 1 MIVCGAGHAGIEASLAAARVGAFTLLLTGNLDTVGQMSCNPAIGGQAKGQIVREIDALGG 60 Query: 68 LMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGF 127 M D GIQFR+LN KGPAV+ PR Q D++ Y+ ++ + Q +L + Q V G Sbjct: 61 EMAINTDVTGIQFRLLNHTKGPAVQSPRAQCDKKAYQFRLKHTLELQPHLQLFQATVTGL 120 Query: 128 NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFM 187 + + + TVV+TTGTFLRG++HIG K GR+GD + +L S Sbjct: 121 IFDGAKVIGCRTNLDIEFYGRTVVVTTGTFLRGLMHIGSNKNEGGRLGDFSARTLSGSLQ 180 Query: 188 KFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN------------ 235 + + R KTGTP RL G+++ + K E+Q D F+F + Sbjct: 181 EAGIELRRFKTGTPPRLLGRSLDFSKMEEQKGDANPTFFAFHDTREDGGVFHVEHGKPQG 240 Query: 236 -------RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGER 288 Q+ C +T T T ++ EN+ SA+Y G+I+ GPRYCPSIEDK VRF ++ Sbjct: 241 EAIPPGCEQVSCWMTYTTARTAELVRENLSRSAMYGGEIEGVGPRYCPSIEDKFVRFADK 300 Query: 289 NGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINP 348 H +FLEPEG TD Y NG+ST+LP ++Q + + +IPGL + ++RP YA+EYDY P Sbjct: 301 PRHLLFLEPEGRGTDEFYVNGLSTSLPFDVQLELVHSIPGLGEAVLLRPAYAVEYDYAPP 360 Query: 349 KELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYI 408 +L +LE++++ GLFLAGQINGT+GYEEAA QGL+AG+N+ARK + R ++YI Sbjct: 361 TQLKMSLESQRVEGLFLAGQINGTSGYEEAAGQGLIAGVNAARKGRGEQPLVLGRHEAYI 420 Query: 409 GVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYI 468 GV+IDDL +KG EPYRMFTSRAE+R+ L +A+ RL + R A+ Sbjct: 421 GVLIDDLVTKGTEEPYRMFTSRAEHRLLLNHGSAELRLLHHASGCKLLNVNRLDNIARKK 480 Query: 469 QEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF 528 + L+S + L+ I +Q+ + E + + Sbjct: 481 EAIESWVRRLESERTSEGTLA--EIIRRQNARAELPSELM------------------RQ 520 Query: 529 SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 S V + + Y+ Y R+ ++ E IP DY +P L E KL+ + Sbjct: 521 SKPVRDEVLYRVLYSGYWEREQRHIDKLAQIEAVRIPAAIDYLRIPGLRRESALKLAAQR 580 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIK 614 P L QAS+I G+ PA +++L++ IK Sbjct: 581 PDTLGQASRISGVNPADVSILMVLIK 606 >gi|226357392|ref|YP_002787132.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Deinococcus deserti VCD115] gi|259495845|sp|C1D0A9|MNMG_DEIDV RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|226319382|gb|ACO47378.1| putative tRNA uridine 5-carboxymethylaminomethyl modification enzyme (glucose-inhibited division protein A) [Deinococcus deserti VCD115] Length = 601 Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust. Identities = 245/616 (39%), Positives = 355/616 (57%), Gaps = 25/616 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA AAK AL+ +T+G M CNPA+GG GK LV E+ AL Sbjct: 4 WNVIVIGGGHAGLEAAWAAAKF-ERVALLIGNPATVGRMPCNPAVGGPGKSQLVFEVQAL 62 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLMGR+AD I RVLN KGPAV+ R Q +R+ Y Q I +D+++GE A Sbjct: 63 GGLMGRLADETAIHTRVLNASKGPAVQSLRVQNERDAYAERAQDVIFGHAGIDIVRGEAA 122 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 ++ +V D + +VV+ GTF+RGV G+ P GR G+ PS L Sbjct: 123 DLESDGRGGWLVVTTDGRRLAARSVVVAAGTFMRGVTWYGRHSRPEGRQGEPPSRFLSAP 182 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGI--T 243 R KTGTP R+ + + + + AD + P F T + R E T Sbjct: 183 LASAGHVLKRYKTGTPPRVRADAVNFSELLEIPADPQ--PRGF-TGRPGPRATESPTWQT 239 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 T ETHR+I N+ S +Y+GDI+ GPRYCPSIEDK+VRF + H +F+EP+G+ T Sbjct: 240 HTTPETHRLIQANLHESPMYAGDIEGLGPRYCPSIEDKVVRFAHHDRHLLFVEPDGVQTS 299 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G S++LP +Q Q +RT+PG E+ I R YA+EYD ++ EL LE++ + G+ Sbjct: 300 EVYLQGFSSSLPPHLQDQLVRTLPGFEQAVIQRYAYAVEYDVVDSTELTLNLESRYLPGV 359 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGT+GYEEAAAQGLVAG+ +AR+S L+ R Y+GV++DDL KG EP Sbjct: 360 FTAGQINGTSGYEEAAAQGLVAGMAAARRSLGLEEQVIGRETGYLGVLLDDLVFKGSDEP 419 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF-AKYIQEYNFLRSLLKSLV 482 YRM TSR E+R+ +R DNAD RLTP+G++LG + + R AKY + L +L + + Sbjct: 420 YRMMTSRVEHRLLVRQDNADERLTPLGLRLGLVTDAEASRVEAKYSRVQAGLEALQRQRI 479 Query: 483 LTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSY 542 + +T +L P+F++ ++ ++ + ++ E L+I Y Sbjct: 480 -----------------QGQTGDSWLRRPEFALADVEALGIELPVLAAEEREALEIRVKY 522 Query: 543 AAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMT 602 A Y R + + + +RL + D++ + ALSNE +EKL+ +P + QA++I G+ Sbjct: 523 AGYIDRARRQLQS-EAHARRLSLEGVDFAGIAALSNEAREKLARHQPQTVDQAARISGVR 581 Query: 603 PAALNLLLIYIKKNTV 618 A + +LL+++K+ V Sbjct: 582 HADIGVLLVHLKQQRV 597 >gi|15805068|ref|NP_293753.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Deinococcus radiodurans R1] gi|21263701|sp|Q9RYC3|MNMG_DEIRA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|6457686|gb|AAF09619.1|AE001866_6 gidA protein [Deinococcus radiodurans R1] Length = 600 Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust. Identities = 252/625 (40%), Positives = 355/625 (56%), Gaps = 38/625 (6%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + ++VIVIGGGHAG EAA AAK + AL+ +T+G M CNPA+GG GK LV E+ Sbjct: 2 KGWNVIVIGGGHAGLEAAWAAAKF-SRVALLVGNPATVGRMPCNPAVGGPGKSQLVFEVQ 60 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL GLMGR+AD I R+LN KGPAV+ R Q +R+ Y Q I +++++GE Sbjct: 61 ALGGLMGRLADDTAIHTRMLNASKGPAVQSLRVQNERDAYAERAQDVIFGHSEIEIVRGE 120 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 A + +V D + +VVL GTF+RGV G+ P GR G+ PS L Sbjct: 121 AADLEQDGQGGWVVVTSDGRRLHARSVVLAAGTFMRGVTWYGRQSRPEGRQGEPPSRFLS 180 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN----RQIE 239 + R KTGTP R+ ++ +FAD IP T R E Sbjct: 181 APLERGGHVLKRYKTGTPPRVRADSV-------RFADLLEIPADPQPRGFTGTPGPRAAE 233 Query: 240 CGI--TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 T T +TH +I EN+ S +Y+GDI+ GPRYCPSIEDK+V+F + H +F+EP Sbjct: 234 SPTWQTHTTPQTHALIQENLHESPMYAGDIEGLGPRYCPSIEDKVVKFAHHDRHLLFVEP 293 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 +G+ T VY G S++LP +Q + +RT+PG E+ I R YA+EYD ++ EL LE+ Sbjct: 294 DGVQTSEVYLQGFSSSLPPRLQDELVRTLPGFEQAVIQRYAYAVEYDVVDSTELTLNLES 353 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 KK+ GLF AGQ+NGT+GYEEAAAQGLVAG +AR+S LD R SY+GV++DDL Sbjct: 354 KKLPGLFTAGQLNGTSGYEEAAAQGLVAGTAAARRSLGLDEQVIGRETSYLGVLLDDLVF 413 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL 477 KG EPYRM TSR E+R+ +R DNAD R+TPIG LG + + + ++Y ++S Sbjct: 414 KGSDEPYRMMTSRVEHRLLVRQDNADERMTPIGHALGLVDD---AELIRVQEKYARVQSG 470 Query: 478 LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFS---IQNLFSICPDARKFSSLVIE 534 +KSL KQ + +TA +L P+ S ++ L + P + + E Sbjct: 471 IKSLS-------------KQRMQGQTADAWLRRPELSLADVETLGATLPA--ELGASERE 515 Query: 535 RLQIESSYAAYTGRQMIEAK-EIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 ++I YA Y R + + E K E L +++ + ALSNE +EKL+ L+P + Sbjct: 516 AVEIRVKYAGYIARAESQLRSEAKARELSL--SGVNFAGITALSNEAREKLTRLQPQTVE 573 Query: 594 QASKIEGMTPAALNLLLIYIKKNTV 618 QAS+I G+ A ++ LL+++K V Sbjct: 574 QASRISGVRHADISALLVHLKGQRV 598 >gi|19703359|ref|NP_602921.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|24636854|sp|Q8RHA1|MNMG1_FUSNN RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG 1; AltName: Full=Glucose-inhibited division protein A 1 gi|19713421|gb|AAL94220.1| Glucose inhibited division protein A [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 628 Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust. Identities = 247/626 (39%), Positives = 362/626 (57%), Gaps = 16/626 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +N+ YDVIV+G GHAG EAA +A+LG TALIT TI MSCNP+IGG GK +LV E Sbjct: 1 MNKDYDVIVVGAGHAGVEAALASARLGNKTALITLYLDTISMMSCNPSIGGPGKSNLVTE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 ID L G MGR D +Q + LN KGPA R R QAD+ YR M+ ++ EN+ +IQ Sbjct: 61 IDVLGGEMGRHIDEFNLQLKDLNTSKGPAARITRGQADKYKYRRKMREKLEKTENISLIQ 120 Query: 122 GEVAGFNTEK----------NIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPA 171 V E I+ I + + +VL TGTFL+G I IG + A Sbjct: 121 DCVEEILVEDIKDTQNSNYIKKITGIKTRLGIIYNAKVIVLATGTFLKGKIVIGDVSYSA 180 Query: 172 GRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD 231 GR G++ + L +S + R +T TP RLD KTI + + E+ +E FS T Sbjct: 181 GRQGETSAEKLSDSLRELGIKIERYQTATPPRLDKKTIDFSQLEELKGEEHPRYFSLFTK 240 Query: 232 KITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGH 291 K N + +T T+ +T +I E +K S I SG + ++GPR+CPSI+ K++ F ++ H Sbjct: 241 KEKNNTVPTWLTYTSDKTIEVIKEMMKFSPIVSGMVNTHGPRHCPSIDRKVLNFPDKEKH 300 Query: 292 QIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKEL 351 QIFLE E N+D +Y NG++TA+P +Q + ++TI GLE I+R GYA+EYDY +L Sbjct: 301 QIFLEMESENSDEIYVNGLTTAMPAFVQEKILKTIKGLENAKIMRYGYAVEYDYAPASQL 360 Query: 352 FPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 +P+LE KKISGLF AGQINGT+GYEEAAAQG +AG+N+A+K + R+++YIGV+ Sbjct: 361 YPSLENKKISGLFFAGQINGTSGYEEAAAQGFIAGVNAAKKIKGEKPVIIDRSEAYIGVL 420 Query: 412 IDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQ-- 469 IDDL K EPYR+ SRAEYR++LR DNA RL ++G + + + + K I Sbjct: 421 IDDLIHKKTPEPYRVLPSRAEYRLTLRYDNAFMRLFDKIKEVGIVDKDKIEFLEKSINDV 480 Query: 470 --EYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARK 527 E N L+++ S+ +K L S I ++ K A E L D S NL + + Sbjct: 481 YMEINNLKNISVSMNEANKFLESLDIE-ERFVKGVKASEILKIKDVSYDNL-KVFLNLND 538 Query: 528 FSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSIL 587 + V +++ Y + R+ + ++ K E IP++ +Y + +SN + L + Sbjct: 539 YEDFVKNQIETMIKYEIFIERENKQIEKFKKLEHMYIPENINYDEIKGISNIARAGLDEV 598 Query: 588 KPFNLLQASKIEGMTPAALNLLLIYI 613 +P ++ +A++I G+T + L++ Y+ Sbjct: 599 RPLSIGEATRISGVTSNDITLIIAYM 624 >gi|328951745|ref|YP_004369080.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Marinithermus hydrothermalis DSM 14884] gi|328452069|gb|AEB12970.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Marinithermus hydrothermalis DSM 14884] Length = 608 Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust. Identities = 244/615 (39%), Positives = 354/615 (57%), Gaps = 22/615 (3%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DV+V+GGGHAG EAA AA+LGA L+T IG M CNPA+GG GK LV EI A Sbjct: 7 TFDVLVVGGGHAGIEAAWAAAQLGARVGLVTTNPDRIGLMPCNPAVGGPGKSQLVFEITA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLMGR+ADA I R LN KGPAVR R Q +R+ Y + QR +L+ N+ ++GEV Sbjct: 67 LGGLMGRLADATAIHTRTLNQSKGPAVRSLRVQVERDAYAVEAQRVLLAHPNVQAVRGEV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 A E + + + D + VVL+ GTFL GV+ G+ PAGR G+ P+ L Sbjct: 127 AHLWIEAGHLCGVQLVDGRRLAGRAVVLSAGTFLSGVVWYGRQSRPAGRQGEPPARFLSQ 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQIECGIT 243 S R KTGTP R+ ++ + E D+ P SF T + T Sbjct: 187 SLRAVGHRLMRFKTGTPPRIRADSVNYGALEVVPPDD--PPGSFTGTPGPHAAAMPTWTT 244 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 RT THR+I EN+ S +Y+GDI+ GPRYCPSIEDK+VRF +++ H +F+EP+G++T Sbjct: 245 RTTARTHRLIQENLHLSPLYAGDIEGIGPRYCPSIEDKVVRFADKDSHLLFVEPDGIHTS 304 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G S++LP E+Q + +R++PG E+ I R YA+EYD ++P EL P L++KK+ GL Sbjct: 305 ELYLQGFSSSLPPELQEEMVRSLPGFERAVIQRYAYAVEYDAVDPTELTPGLQSKKLPGL 364 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGT+GYEEAAAQGL+AG+N+AR + + R YIGV+IDDL +GV EP Sbjct: 365 FTAGQINGTSGYEEAAAQGLLAGVNAARFAAGEPEVHLPRESGYIGVLIDDLVHRGVDEP 424 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRM TSR E R+ R DNAD R+ P ++ G R + + +Y +R+ L+ L Sbjct: 425 YRMMTSRVELRLLCRADNADERMVPYAVRWGL---RPKADLERVEAKYARVRAELERLA- 480 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLF--SICPDARKFSSLVIERLQIESS 541 + DG + +L P+ S L + P+ + ++++ + Sbjct: 481 ----------RVRVDGV--SGLHYLRRPEASYAALLERGLGPEV-PLTPEEAYQVEVRAK 527 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ+ + ++ +P DY ++ LS E EKL ++P + +A++I G+ Sbjct: 528 YAGYIERQIRLRERLRELSAYRLPAGLDYRTVHNLSREAMEKLERVRPATVAEAARIPGL 587 Query: 602 TPAALNLLLIYIKKN 616 + + LL+++ + Sbjct: 588 RDSDITALLVHLART 602 >gi|282850776|ref|ZP_06260151.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus gasseri 224-1] gi|282558184|gb|EFB63771.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus gasseri 224-1] Length = 566 Score = 429 bits (1102), Expect = e-118, Method: Compositional matrix adjust. Identities = 237/551 (43%), Positives = 321/551 (58%), Gaps = 5/551 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAG EAA AA++G T L+T + M CNP++GG KG +VREIDAL Sbjct: 9 YDVIVVGAGHAGVEAALAAARMGEKTLLLTINLDMVAFMPCNPSVGGPAKGTVVREIDAL 68 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ DA IQ R+LN KGPAVR R QAD+ Y M+ I ++ NL + Q Sbjct: 69 GGEMGKNIDATYIQMRMLNTGKGPAVRALRAQADKWQYHEHMKDTIENEPNLTLRQAVAD 128 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E ++ + +VVLTTGT RG I IG+L +G PS L + Sbjct: 129 ELIVEDGACKGLITNTGAKYHAKSVVLTTGTAARGKIIIGELTYSSGPNNSLPSIKLPEN 188 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGIT 243 K F R KTGTP R+DG T+ + KT+++ D++ FS+ + Q+ C +T Sbjct: 189 LEKLGFKLRRFKTGTPPRVDGNTVDYSKTQEEPGDKKPRHFSYTSKDSDYLKDQMSCYMT 248 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II N+ + ++SG IK GPRYCPSIEDK+VRF +++ HQIFLEPEG NT Sbjct: 249 YTNTVTHDIIRANLDRAPMFSGVIKGVGPRYCPSIEDKVVRFADKDRHQIFLEPEGRNTK 308 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y ST++PEE+Q + + ++ GLEK ++RPGYAIEYD I P +L TLETK I L Sbjct: 309 EIYVGAFSTSMPEEVQLKMLHSVAGLEKAELMRPGYAIEYDVIEPWQLKHTLETKNIKHL 368 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQ+NGT+GYEEAA QGL+AGIN+A + R ++YIGV+IDDL +KG EP Sbjct: 369 FTAGQMNGTSGYEEAAGQGLIAGINAALSAQNKPGFTLQRDEAYIGVLIDDLVTKGTNEP 428 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT G +LG I E R +F Q + + +K + + Sbjct: 429 YRLLTSRAEYRLLLRHDNADLRLTEKGHELGLISEERYAKFEAKKQAISRAMAAIKKVTI 488 Query: 484 -TSKNLSSTSISFKQD--GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + + S KQD + +FL P + + + V E+++I Sbjct: 489 HPTDEVQEYLASVKQDRLNAGVSGADFLKRPRVTFDAVEKLSGQTLATDRYVKEQVEIAL 548 Query: 541 SYAAYTGRQMI 551 Y Y ++ + Sbjct: 549 KYEGYIKKKRL 559 >gi|229020708|ref|ZP_04177435.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus AH1273] gi|228740603|gb|EEL90874.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus AH1273] Length = 505 Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust. Identities = 222/494 (44%), Positives = 314/494 (63%), Gaps = 7/494 (1%) Query: 130 EKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKF 189 E + ++ Q + TVV+TTGTFLRG I +G LK +G PS +L + Sbjct: 8 EDGVCKGVITQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSEHLEEL 67 Query: 190 DFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTNLET 249 FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T T+ ET Sbjct: 68 GFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTYTSTET 127 Query: 250 HRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNG 309 HR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT VY G Sbjct: 128 HRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQEVYVQG 187 Query: 310 ISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQI 369 +ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ AGQI Sbjct: 188 LSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLYTAGQI 247 Query: 370 NGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTS 429 NGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPYR+ TS Sbjct: 248 NGTSGYEEAAGQGLMAGINAACRSLGKKEVILGRADAYIGVLIDDLVTKGTNEPYRLLTS 307 Query: 430 RAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKN-- 487 RAEYR+ LR DNAD RLT +G ++G I E R +RF + + L S+++ + Sbjct: 308 RAEYRLLLRHDNADLRLTEVGREIGLIKEDRYERFTNKKLQIEQEKERLGSIIIKPRPEV 367 Query: 488 ---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + S S +DG A + L P+ + +++ + P S + E+++I++ Y Sbjct: 368 QELIRSIGGSELKDGI--RASDLLRRPEVTYEHIHLLVPSEVALSDEITEQVEIQTKYEG 425 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS+I G+ PA Sbjct: 426 YIEKSLQQVDRMKKMENKKIPVDIDYDAISSLASEARQKLKDVRPLSMGQASRISGVNPA 485 Query: 605 ALNLLLIYIKKNTV 618 +++LL+YI++ + Sbjct: 486 DVSILLVYIEQGKI 499 >gi|218297060|ref|ZP_03497737.1| glucose inhibited division protein A [Thermus aquaticus Y51MC23] gi|218242615|gb|EED09152.1| glucose inhibited division protein A [Thermus aquaticus Y51MC23] Length = 596 Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust. Identities = 239/593 (40%), Positives = 335/593 (56%), Gaps = 32/593 (5%) Query: 31 TALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPA 90 AL+T IG M CNPA+GG GK LV E+ AL GLMGR ADAA I RVLN KGPA Sbjct: 28 VALVTVNPERIGMMPCNPAVGGPGKSQLVAELVALGGLMGRAADAAAIHTRVLNRSKGPA 87 Query: 91 VRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTV 150 V+ R Q DR+LY L Q EIL++ + V++GEVA E + + D I V Sbjct: 88 VQSLRVQVDRDLYALKAQ-EILAERPIAVVRGEVASLWVEGGRLLGVRTVDGRGIPARAV 146 Query: 151 VLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTII 210 V+ GTFL GV+ G+ PAGR G+ P+ L S R KTGTP R+ ++ Sbjct: 147 VVAGGTFLSGVVWYGRKSRPAGRQGEPPARFLSQSLRAVGHTLRRFKTGTPPRIRADSV- 205 Query: 211 WDKTEKQFADERLIPFSFM------TDKITNRQIECGITRTNLETHRIIMENIKHSAIYS 264 D +E + P SF D++ Q TRT THR+I+EN+ S +Y+ Sbjct: 206 -DFSELSLVPPEVPPGSFTGKPGPYADRLPTWQ-----TRTTGRTHRLILENLHLSPLYA 259 Query: 265 GDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIR 324 GDI+ GPRYCPSIEDK+VRF ++ H +F+EP+GL T VY G S++LP E+Q + +R Sbjct: 260 GDIEGIGPRYCPSIEDKVVRFADKESHLLFVEPDGLATSEVYLQGFSSSLPPELQEEMVR 319 Query: 325 TIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLV 384 ++PG + I R YA+EYD ++P EL L+++ + GLF AGQ+NGT+GYEEAAAQGL+ Sbjct: 320 SLPGFSRAVIQRYAYAVEYDSLDPTELTRGLQSRLLPGLFSAGQVNGTSGYEEAAAQGLL 379 Query: 385 AGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADN 444 AG+N+AR + L + R YIGVM+DDL +G EPYRM TSR E R+ R DNAD Sbjct: 380 AGLNAARYALGLPEVHLGRETGYIGVMVDDLVGRGTDEPYRMMTSRVELRLLCRADNADE 439 Query: 445 RLTPIGMKLGCIGERRQKRF-AKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRT 503 RL P+ + G +R AKY + LR L + + DG + Sbjct: 440 RLVPLAVAWGLRPREDLERVRAKYARVEAELRRL---------------EALRVDGV--S 482 Query: 504 AYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRL 563 ++L P+ + + L P S E+++I + YA Y RQ ++++ E Sbjct: 483 GLQWLRRPENTYEALLERFPSPTPLSPEEREQVEIRAKYAGYIERQEKLREKMRDLEALR 542 Query: 564 IPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKN 616 +P+ DY +P LS E EKLS +P L +A+++ G+ + L LL+++++ Sbjct: 543 LPEGLDYPRVPGLSREAVEKLSRFRPRTLAEAARVPGVRDSDLTALLVHLRRE 595 >gi|7657947|emb|CAB89205.1| putative glucose inhibited division protein A [Thermus thermophilus] Length = 596 Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust. Identities = 246/614 (40%), Positives = 351/614 (57%), Gaps = 23/614 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+V+GGGHAG LG L+T IG M CNPA+GG GK LV E+ AL Sbjct: 4 YDVVVVGGGHAGSRRPG-RRPLGVPGGLVTVNPDRIGMMPCNPAVGGPGKSQLVAEVVAL 62 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLMGR ADAA I RVLN KGPAV+ R Q DR+LY L Q EIL++ ++V++GEVA Sbjct: 63 GGLMGRAADAAAIHTRVLNRSKGPAVQSLRVQVDRDLYALKAQ-EILAERPVEVLRGEVA 121 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + D + VV+ GTFL GV+ G+ PAGR G+ P+ L S Sbjct: 122 ALWVEGGRLLGVRTVDGRTLPAKAVVVAGGTFLSGVVWYGRKSRPAGRQGEPPARFLSQS 181 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 R KTGTP R+ ++ + + E + P SF + + ++ TR Sbjct: 182 LKAVGHTLRRFKTGTPPRIRADSVDFGRLE--VVPPEVPPGSFTGNPGPHAARLPTWQTR 239 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T THR+I EN+ S +Y+GDI+ GPRYCPSIEDK+VRF ++ H +F+EP+GL+T Sbjct: 240 TTARTHRLIRENLHLSPLYAGDIQGIGPRYCPSIEDKVVRFADKESHLLFVEPDGLSTTE 299 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G S++LP E+Q + +R++PG E+ I R YA+EYD ++P EL L+++ + GLF Sbjct: 300 VYLQGFSSSLPPELQEEMVRSLPGFERAVIQRYAYAVEYDSLDPTELTRGLQSRLLPGLF 359 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ+NGT+GYEEAAAQGL+AG+N+AR + L + R YIGV++DDL +G EPY Sbjct: 360 SAGQVNGTSGYEEAAAQGLLAGLNAARFALGLPEVHLPRESGYIGVLVDDLVGRGTDEPY 419 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF-AKYIQEYNFLRSLLKSLVL 483 RM TSR E R+ R DNAD RLTP+ + G + +R AKY + LR L Sbjct: 420 RMMTSRVELRLLCRADNADERLTPLAVAWGLRPKEDLERVEAKYRRVAAELRRL------ 473 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 + L +S ++L P+ + + L P + S ++++ + YA Sbjct: 474 --QALRVEGVS---------GLQWLRRPENTYRALAERFPPSEPLSPEEAYQVEVRAKYA 522 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y RQ +++K E IP+ D+ +P LS E EKLS +P +L +A++I G+ Sbjct: 523 GYIERQERLREKMKDLEAFRIPEGMDFPKVPGLSREAAEKLSRHRPKSLAEAARIPGVRD 582 Query: 604 AALNLLLIYIKKNT 617 + L L +++++ Sbjct: 583 SDLTALAVHLRRGA 596 >gi|256846685|ref|ZP_05552141.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Fusobacterium sp. 3_1_36A2] gi|256717905|gb|EEU31462.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Fusobacterium sp. 3_1_36A2] Length = 627 Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust. Identities = 242/627 (38%), Positives = 364/627 (58%), Gaps = 18/627 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +++ YDVIV+G GHAG EAA +A+LG TALIT TI MSCNP+IGG GK +LV E Sbjct: 1 MDKDYDVIVVGAGHAGVEAAFASARLGNKTALITLYLDTISMMSCNPSIGGPGKSNLVTE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 ID L G MGR D +Q + LN KGPA R R QAD+ YR M+ ++ EN+ +IQ Sbjct: 61 IDVLGGEMGRHIDEFNLQLKDLNTSKGPAARITRGQADKYKYRRKMREKLEKTENISLIQ 120 Query: 122 G-----------EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIP 170 + + EK +I I + + ++L TGTFL+G I IG + Sbjct: 121 DCAEEILVEDIKDSKNLSYEKKVIG-IKTRLGIIYNAKAIILATGTFLKGKIVIGDVTYS 179 Query: 171 AGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT 230 AGR G++ + L +S + R +T TP RLD KTI + + E+ +E FS T Sbjct: 180 AGRQGETSAEKLSDSLRELGVKIERYQTATPPRLDKKTIDFSQLEELKGEEHPRYFSLFT 239 Query: 231 DKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNG 290 K N + +T T+ ET ++ E +K S I SG + ++GPR+CPSI+ K++ F ++ Sbjct: 240 KKEKNNTVPTWLTYTSKETIEVVREMMKFSPIVSGMVNTHGPRHCPSIDRKVLNFPDKTK 299 Query: 291 HQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKE 350 HQIFLE E N+D +Y NG++TA+P +Q + ++TI GLE I+R GYA+EYDY + Sbjct: 300 HQIFLEMESENSDEIYVNGLTTAMPAFVQEKILKTIKGLENAKIMRHGYAVEYDYAPASQ 359 Query: 351 LFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGV 410 L+P+LE K+ISGLF AGQINGT+GYEEAAAQG +AG+N+A+K + R+++YIGV Sbjct: 360 LYPSLENKRISGLFFAGQINGTSGYEEAAAQGFIAGVNAAKKIKGEKPVIIDRSEAYIGV 419 Query: 411 MIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQ- 469 +IDDL K EPYR+ SRAEYR++LR DNA RL ++G + + K K I Sbjct: 420 LIDDLIHKKTPEPYRVLPSRAEYRLTLRYDNAFMRLFDKIKEVGIVDRDKIKFLEKSIND 479 Query: 470 ---EYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDAR 526 E N L+++ S+ ++ L + I ++ K A E L D S NL + + Sbjct: 480 VYMEINNLKNISVSMNEANRFLENLGIE-ERFVKGVKASEILKIKDVSYDNL-KVFLNLD 537 Query: 527 KFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSI 586 + V +++ Y + R+ + ++ K E IP++ +Y + +SN + L+ Sbjct: 538 DYEDFVKNQIETMIKYEIFIERENKQIEKFKKLEHMYIPENINYDEIKGISNIARAGLNE 597 Query: 587 LKPFNLLQASKIEGMTPAALNLLLIYI 613 ++P ++ +A++I G+T + L++ ++ Sbjct: 598 VRPLSIGEATRISGVTSNDITLIIAHM 624 >gi|2281305|gb|AAC45494.1| glucose inhibited division protein homolog GidA [Lactococcus lactis subsp. cremoris MG1363] Length = 535 Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust. Identities = 237/527 (44%), Positives = 317/527 (60%), Gaps = 12/527 (2%) Query: 29 ASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKG 88 + T L+T + + M CNP+IGG KG +VREIDAL G MGR D IQ ++LN KG Sbjct: 11 SKTLLMTINLNMVAFMPCNPSIGGSAKGIVVREIDALGGEMGRNIDKTYIQMKMLNTGKG 70 Query: 89 PAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGF--NTEKNIISSIVMQDNSMIR 146 PAVR R QAD++ Y +M+ + QENL + QG V + EK + + + Sbjct: 71 PAVRALRAQADKDEYAASMKNTVSDQENLTLRQGMVEELILDDEKQKVIGVRTSTGTQYG 130 Query: 147 CSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDG 206 V++TTGT LRG I IG+LK +G S L ++ + F+ GR KTGTP R+ Sbjct: 131 AKAVIITTGTALRGEIIIGELKYSSGPNNSLSSIGLADNLREIGFEIGRFKTGTPPRVLA 190 Query: 207 KTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGITRTNLETHRIIMENIKHSAIYS 264 +I +DKTE Q DE FSFM+ + QI C +T T +H I+ +N+ + ++S Sbjct: 191 SSIDYDKTEIQPGDEAPNHFSFMSSDEDYLKDQIPCWLTYTTENSHTILRDNLHRAPLFS 250 Query: 265 GDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIR 324 G +K GPRYCPSIEDKI RF ++ HQ+FLEPEG NT+ VY G+ST++PE++Q ++ Sbjct: 251 GIVKGVGPRYCPSIEDKITRFADKPRHQLFLEPEGRNTEEVYIGGLSTSMPEDVQFDLVK 310 Query: 325 TIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLV 384 +IPGLE ++RPGYAIEYD + P +L PTLETK ISGLF AGQ NGT+GYEEAA QGLV Sbjct: 311 SIPGLENAKMMRPGYAIEYDVVMPHQLRPTLETKLISGLFTAGQTNGTSGYEEAAGQGLV 370 Query: 385 AGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADN 444 AGIN+A K R+++YIGVMIDDL +KG LEPYR+ TSRAEYR+ LR DNAD Sbjct: 371 AGINAALKIQGKPEFILKRSEAYIGVMIDDLVTKGTLEPYRLLTSRAEYRLILRHDNADR 430 Query: 445 RLTPIGMKLGCIG----ERRQKRFAKYIQEYNFLRS-LLKSLVLTSKNLSSTSISFKQDG 499 RLT IG ++G + E Q + A++ +E L S LK L T + L +D Sbjct: 431 RLTEIGRQVGLVSDAQWEHYQAKMAQFDREMKRLNSEKLKPLPDTQEKLGKLGFGPIKDA 490 Query: 500 KTRTAYEFLSYPDFSIQNLFSICPDARK-FSSLVIERLQIESSYAAY 545 T EFL P+ + + A + V E ++ E +Y Y Sbjct: 491 --LTGAEFLKRPEVNYDEVIDFIGQAPEVIDRTVSELIETEITYEGY 535 >gi|55981941|ref|YP_145238.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Thermus thermophilus HB8] gi|81170587|sp|Q5SGV8|MNMG_THET8 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|55773354|dbj|BAD71795.1| glucose inhibited division protein A [Thermus thermophilus HB8] Length = 597 Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust. Identities = 235/589 (39%), Positives = 338/589 (57%), Gaps = 22/589 (3%) Query: 31 TALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPA 90 AL+T IG M CNPA+GG GK LV E+ AL GLMGR ADAA I RVLN KGPA Sbjct: 29 VALVTVNPDRIGMMPCNPAVGGPGKSQLVAEVVALGGLMGRAADAAAIHTRVLNRSKGPA 88 Query: 91 VRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTV 150 V+ R Q DR+LY L Q EIL++ ++V++GEVA E + + D + V Sbjct: 89 VQSLRVQVDRDLYALKAQ-EILAERPVEVLRGEVAALWVEGGRLLGVRTVDGRTLPAKAV 147 Query: 151 VLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTII 210 V+ GTFL GV+ G+ PAGR G+ P+ L S R KTGTP R+ ++ Sbjct: 148 VVAGGTFLSGVVWYGRKSRPAGRQGEPPARFLSQSLKAVGHTLRRFKTGTPPRIRADSVD 207 Query: 211 WDKTEKQFADERLIPFSFMTDKITNR-QIECGITRTNLETHRIIMENIKHSAIYSGDIKS 269 + + E + P SF + + ++ TRT THR+I EN+ S +Y+GDI+ Sbjct: 208 FGRLE--VVPPEVPPGSFTGNPGPHAARLPTWQTRTTARTHRLIRENLHLSPLYAGDIQG 265 Query: 270 YGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGL 329 GPRYCPSIEDK+VRF ++ H +F+EP+GL+T VY G S++LP E+Q + +R++PG Sbjct: 266 IGPRYCPSIEDKVVRFADKESHLLFVEPDGLSTTEVYLQGFSSSLPPELQEEMVRSLPGF 325 Query: 330 EKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINS 389 E+ I R YA+EYD ++P EL L+++ + GLF AGQ+NGT+GYEEAAAQGL+AG+N+ Sbjct: 326 ERAVIQRYAYAVEYDSLDPTELTRGLQSRLLPGLFSAGQVNGTSGYEEAAAQGLLAGLNA 385 Query: 390 ARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPI 449 AR + L + R YIGV++DDL +G EPYRM TSR E R+ R DNAD RLTP+ Sbjct: 386 ARFALGLPEVHLPRESGYIGVLVDDLVGRGTDEPYRMMTSRVELRLLCRADNADERLTPL 445 Query: 450 GMKLGCIGERRQKRF-AKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFL 508 + G + +R AKY + LR L + L +S ++L Sbjct: 446 AVAWGLRPKEDLERVEAKYRRVAAELRRL--------QALRVEGVS---------GLQWL 488 Query: 509 SYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDF 568 P+ + + L P + S ++++ + YA Y RQ +++K E IP+ Sbjct: 489 RRPENTYRALAERFPPSEPLSPEEAYQVEVRAKYAGYIERQERLREKMKDLEAFRIPEGM 548 Query: 569 DYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNT 617 D+ +P LS E EKLS +P +L +A++I G+ + L L +++++ Sbjct: 549 DFPKVPGLSREAAEKLSRHRPKSLAEAARIPGVRDSDLTALAVHLRRGA 597 >gi|269123889|ref|YP_003306466.1| glucose inhibited division protein A [Streptobacillus moniliformis DSM 12112] gi|268315215|gb|ACZ01589.1| glucose inhibited division protein A [Streptobacillus moniliformis DSM 12112] Length = 619 Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust. Identities = 245/628 (39%), Positives = 362/628 (57%), Gaps = 28/628 (4%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YD+IV+G GHAG EA+ AA+LG AL T I MSCNPAIGG GK H+V EI Sbjct: 2 QNYDIIVVGAGHAGVEASLAAARLGKKVALFTIYLDNIAMMSCNPAIGGPGKSHIVSEIG 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 L G M D +Q + LN KG A + R QAD+ YR+ M+ I ++NLDVIQ Sbjct: 62 MLGGQMAVHIDKYNLQLKNLNHTKGLAAKITRAQADKYWYRIKMREIIEKEDNLDVIQ-- 119 Query: 124 VAGFNTEKNIISSIVMQDNSMI-----------RCSTVVLTTGTFLRGVIHIGKLKIPAG 172 N++ +++ DN + V+L TGTFL G IG +K AG Sbjct: 120 --------NMVEDLILDDNKKVIGVIDALGLKYSAKAVILCTGTFLNGEYIIGDVKYSAG 171 Query: 173 RMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK 232 R G+ SNSL ++ +K+ + R +T TP R+D K+I D EK + + FS+M++K Sbjct: 172 RQGEKASNSLPDNLVKYGIEMDRYQTATPPRIDKKSINLDILEKLYGETNPRYFSYMSNK 231 Query: 233 ITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQ 292 + +E +T T ET ++ E +K+S I +G + + GPR+CPS++ KI+ F ++ HQ Sbjct: 232 TDEKPLETWLTFTTEETIKVGQELLKYSPIVTGIVSTKGPRHCPSLDRKIMNFPDKTDHQ 291 Query: 293 IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF 352 IFLE E +D +Y NG +TA+P Q + I+TI GLE I+R GYA+EYD+I ++L Sbjct: 292 IFLEQESRESDEIYVNGFTTAMPPFAQEKLIKTIKGLENAKILRYGYAVEYDFIPARQLN 351 Query: 353 PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMI 412 +LE+K I LF AG INGT+GYEEAAAQG +AG+N+ARK + + I SR + YIGV+I Sbjct: 352 FSLESKIIENLFQAGTINGTSGYEEAAAQGFIAGVNAARKIDGKEPIIISRDEGYIGVLI 411 Query: 413 DDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYN 472 DD+ +K EPYR+ SRAEYR++LR DN RL ++G + + + K IQ + Sbjct: 412 DDIINKETPEPYRVLPSRAEYRLTLRQDNVFIRLLEKSKEIGLLDKSKLKELEDNIQIIS 471 Query: 473 FLRSLLKSLVLTSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARK 527 LK + + N + I K D T TA+EFL+ + + NL + + + Sbjct: 472 DEIERLKEIKIYP-NKENNDIIKKIDKNTSHNNVMTAFEFLARQEITYDNL-KLFIETKD 529 Query: 528 FSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSIL 587 + E+++IE+ Y + R+ + ++ K E IP+DF+Y + LSN LS Sbjct: 530 LPEISKEQVEIEAKYRIFIERERNQIEKFKKLENIAIPEDFNYEIVKGLSNIAISGLSYT 589 Query: 588 KPFNLLQASKIEGMTPAALNLLLIYIKK 615 KP N+ QA++I G+T + +L+ +K+ Sbjct: 590 KPKNIGQATRISGVTYNDIAILVSILKE 617 >gi|291461017|ref|ZP_06026473.2| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Fusobacterium periodonticum ATCC 33693] gi|291379412|gb|EFE86930.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Fusobacterium periodonticum ATCC 33693] Length = 630 Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust. Identities = 240/639 (37%), Positives = 360/639 (56%), Gaps = 36/639 (5%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 ++++ YDVIV+G GHAG EAA +A+LG ALIT TI MSCNP+IGG GK +LV Sbjct: 3 IMDKDYDVIVVGAGHAGVEAALASARLGNKVALITLYLDTISMMSCNPSIGGPGKSNLVT 62 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EID L G MGR D +Q + LN KGPA R R QAD+ YR M+ ++ EN+ +I Sbjct: 63 EIDVLGGEMGRHIDEFNLQLKDLNTSKGPAARITRGQADKYKYRKKMREKLEKNENISLI 122 Query: 121 QGEV-----------AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKI 169 Q V + EK +I + + + +VL TGTFL+G I IG + Sbjct: 123 QDCVEEILVEDIKDRQNLSYEKKVIG-VKTRLGLIYNTKAIVLATGTFLKGKIVIGDVTY 181 Query: 170 PAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM 229 AGR G++ + L +S + R +T TP RLD KTI + + E+ +E FS Sbjct: 182 SAGRQGETSAEKLSDSLRELGIKIERYQTATPPRLDKKTIDFSQLEELKGEEHPRYFSIF 241 Query: 230 TDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERN 289 T K N + +T T+ ET ++ E +K S I SG + ++GPR+CPSI+ K++ F E+ Sbjct: 242 TKKEKNNTVPTWLTYTSEETIEVVREMMKFSPIVSGMVNTHGPRHCPSIDRKVLNFPEKA 301 Query: 290 GHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPK 349 HQIFLE E N+D +Y NG++TA+P +Q + +RTI GLE I+R GYA+EYDY Sbjct: 302 KHQIFLEMESENSDEIYVNGLTTAMPAFVQEKILRTIKGLENAKIMRHGYAVEYDYAPAS 361 Query: 350 ELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIG 409 +L+P+LE KKISGLF +GQINGT+GYEEAAAQG +AG+N+++K + + R+++YIG Sbjct: 362 QLYPSLENKKISGLFFSGQINGTSGYEEAAAQGFIAGVNASKKIKGEEPVIIDRSEAYIG 421 Query: 410 VMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQ 469 V+IDDL K EPYR+ SRAEYR++LR DNA RL ++G + + R Sbjct: 422 VLIDDLIHKKTPEPYRVLPSRAEYRLTLRYDNAFMRLFDKIKEVGIVDKDR--------- 472 Query: 470 EYNFLRSLLKSLVLTSKNLSSTSISFKQDG-------------KTRTAYEFLSYPDFSIQ 516 FL + + + NL + S+S + K A E L D S Sbjct: 473 -IEFLEKAINDVYMEINNLKNISVSMNEANNFLEKLGVEERFVKGVKASEILKIKDVSYD 531 Query: 517 NLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPAL 576 +L + + + V +++ Y + R+ + ++ K E I K+ +Y + + Sbjct: 532 DLKTFL-NLNDYEDFVKNQIETMIKYEVFIERENKQIEKFKKLEHMYIDKNINYDDIKGI 590 Query: 577 SNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 SN + L+ ++P ++ +A++I G+T + L++ ++ + Sbjct: 591 SNIARAGLNEVRPLSIGEATRISGVTSNDITLIIAHMNQ 629 >gi|225164332|ref|ZP_03726599.1| glucose inhibited division protein A [Opitutaceae bacterium TAV2] gi|224801066|gb|EEG19395.1| glucose inhibited division protein A [Opitutaceae bacterium TAV2] Length = 676 Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust. Identities = 246/651 (37%), Positives = 347/651 (53%), Gaps = 64/651 (9%) Query: 27 LGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVK 86 +GA+T L+T TI MSCNPAIGG KG +VREIDAL G M D GIQFR+LN Sbjct: 1 MGANTLLVTGNVDTIAQMSCNPAIGGQAKGQIVREIDALGGEMAINTDLTGIQFRLLNES 60 Query: 87 KGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIR 146 KGPAV+ PR Q D++ Y+ ++ + Q +L V Q VAG E V+ + + Sbjct: 61 KGPAVQSPRAQCDKKAYQYRLKHTLELQPDLQVFQATVAGLIYENTTAGRKVIGVRTNLD 120 Query: 147 CS----TVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPA 202 TVV+TTGTFLRG++HIG + GR GD + +L SF++ + RLKTGTP Sbjct: 121 IEFVGRTVVVTTGTFLRGLMHIGANQNEGGRAGDFSAKTLSASFLEAGIELQRLKTGTPP 180 Query: 203 RLDGKTIIWDKTEKQFADERLIPFSFMTDK-------ITNR------------------- 236 RL G+++ + K E Q D R F+F + + R Sbjct: 181 RLLGRSLDFSKMEPQHGDARPTLFAFHDTRDPQDLFHVEQRPHPSPPPPPPPTQTRLGWA 240 Query: 237 ----QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQ 292 Q+ C +T T +T RI EN+ SA+YSG+I G RYCPS EDKIVRF ++ H Sbjct: 241 PGSNQLPCWMTYTTADTARIARENLTRSAMYSGNITGTGARYCPSFEDKIVRFADKPRHL 300 Query: 293 IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF 352 +FLEPEG +TD Y NG+ST++P ++Q Q +R++PGLE ++RP YA+EYD+ P +LF Sbjct: 301 LFLEPEGRSTDEYYVNGLSTSMPFDVQLQLVRSVPGLENAVLMRPAYAVEYDFAPPTQLF 360 Query: 353 PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMI 412 P+LE+KK+ LF AGQINGT+GYEEAA QGLVAG+N+ K + +R ++Y GV+I Sbjct: 361 PSLESKKVENLFFAGQINGTSGYEEAACQGLVAGVNAVNKVRGAAPLIIARHEAYTGVLI 420 Query: 413 DDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYN 472 DDL +KG EPYRMFTSRAEYR+ +A+ RL G + R R + + Sbjct: 421 DDLVTKGTTEPYRMFTSRAEYRLLFNHGSAELRLLHHARAHGLVSATRLARIEEKKRRIE 480 Query: 473 FLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSY------------PDFSIQNLFS 520 + + L++ + + ++ D R P +N Sbjct: 481 YWITTLETTRIPADIAATAGQGTWGDFIRRAGSAAGQGRGGEGGREASPRPPSDAENTIE 540 Query: 521 I---------------CPDARKFSSLVIERLQ---IESSYAAYTGRQMIEAKEIKFEEKR 562 P F++L E Q Y Y R+ + +++ EK Sbjct: 541 TQEPSKRVDGGLGETSLPLPSDFTALPDELRQEVLYRVGYKGYLEREQRQIEKLSHVEKI 600 Query: 563 LIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYI 613 IP DFDY ++ L E +KL P+NL QAS+I G+ PA +++L++ + Sbjct: 601 KIPPDFDYRAVRGLRLESAQKLIAAHPYNLGQASRISGVNPADISILMVAL 651 >gi|296328795|ref|ZP_06871309.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296154130|gb|EFG94934.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 632 Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust. Identities = 243/626 (38%), Positives = 366/626 (58%), Gaps = 16/626 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +++ YDVIV+G GHAG EAA +A+LG TALIT TI MSCNP+IGG GK +LV E Sbjct: 5 MDKDYDVIVVGAGHAGVEAALASARLGNKTALITLYLDTISMMSCNPSIGGPGKSNLVTE 64 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 ID L G MGR D +Q + LN KGPA R R QAD+ YR M+ ++ EN+ +IQ Sbjct: 65 IDVLGGEMGRHIDEFNLQLKDLNTSKGPAARITRGQADKYKYRRKMREKLEKTENISLIQ 124 Query: 122 GEVAGFNTE--KNIISSIVMQDNSMIR--------CSTVVLTTGTFLRGVIHIGKLKIPA 171 V E K+ +S +++ + I+ +VL TGTFL+G I IG + A Sbjct: 125 DCVEEILVEDIKDSQNSNYIKEVTGIKTRLGIIYNAKVIVLATGTFLKGKIVIGDVSYSA 184 Query: 172 GRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD 231 GR G++ + L +S + R +T TP RLD KTI + + E+ +E FS T Sbjct: 185 GRQGETSAEKLSDSLRELGIKIERYQTATPPRLDKKTIDFSQLEELKGEEHPRYFSLFTK 244 Query: 232 KITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGH 291 K N + +T T+ +T +I E +K S I SG + ++GPR+CPSI+ K++ F ++ H Sbjct: 245 KEKNNTVPTWLTYTSDKTIEVIKEMMKFSPIVSGMVNTHGPRHCPSIDRKVLNFPDKEKH 304 Query: 292 QIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKEL 351 QIFLE E N+D +Y NG++TA+P +Q + ++TI GLE I+R GYA+EYDY +L Sbjct: 305 QIFLEMESENSDEIYVNGLTTAMPAFVQEKILKTIKGLENAKIMRHGYAVEYDYAPASQL 364 Query: 352 FPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 +P+LE K+ISGLF AGQINGT+GYEEAAAQG +AG+N+A+K + R+++YIGV+ Sbjct: 365 YPSLENKRISGLFFAGQINGTSGYEEAAAQGFIAGVNAAKKIKGEKPVIIDRSEAYIGVL 424 Query: 412 IDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQ-- 469 IDDL K EPYR+ SRAEYR++LR DNA RL ++G + + + + K I Sbjct: 425 IDDLIHKKTPEPYRVLPSRAEYRLTLRYDNAFMRLFDKIKEVGIVDKDKIEFLEKSINDV 484 Query: 470 --EYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARK 527 E N L+++ S+ +K L + I ++ K A E L D +L + + Sbjct: 485 YMEINNLKNISVSMNEANKFLENLDIE-ERFVKGVKASEILKIKDVRYDDL-KVFLNLND 542 Query: 528 FSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSIL 587 + V +++ Y + R+ + ++ K E IP++ +Y + +SN + L + Sbjct: 543 YEDFVKNQIETMIKYEIFIERENKQIEKFKKLEHMYIPENINYDEIKGISNIARAGLDEV 602 Query: 588 KPFNLLQASKIEGMTPAALNLLLIYI 613 +P ++ +A++I G+T + L++ Y+ Sbjct: 603 RPLSIGEATRISGVTSNDITLIIAYM 628 >gi|260495367|ref|ZP_05815494.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Fusobacterium sp. 3_1_33] gi|260197145|gb|EEW94665.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Fusobacterium sp. 3_1_33] Length = 625 Score = 422 bits (1085), Expect = e-116, Method: Compositional matrix adjust. Identities = 242/628 (38%), Positives = 364/628 (57%), Gaps = 18/628 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +++ YDVIV+G GHAG EAA +A+LG AL+T TI MSCNP+IGG GK +LV E Sbjct: 1 MDKDYDVIVVGAGHAGVEAAFASARLGNKVALMTLYLDTISMMSCNPSIGGPGKSNLVTE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 ID L G MGR D +Q + LN KGPA R R QAD+ YR M+ ++ EN+ +IQ Sbjct: 61 IDVLGGEMGRHIDEFNLQLKDLNTSKGPAARITRGQADKYKYRRKMREKLEKTENISLIQ 120 Query: 122 G-----------EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIP 170 + + EK +I I + + +VL TGTFL+G I IG + Sbjct: 121 DCAEEILVEDIKDSQNSSYEKKVIG-IKTRLGIIYNAKAIVLATGTFLKGKIVIGDVTYS 179 Query: 171 AGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT 230 AGR G++ + L +S R +T TP RLD KTI + + E+ +E FS T Sbjct: 180 AGRQGETSAEKLSDSLRDLGIKIERYQTATPPRLDKKTIDFSQLEELKGEEHPRYFSIFT 239 Query: 231 DKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNG 290 K N + +T T+ +T +I E ++ S I SG + ++GPR+CPSI+ K++ F ++ Sbjct: 240 KKERNNTVPTWLTYTSEKTIEVIKEMMRFSPIVSGMVNTHGPRHCPSIDRKVLNFPDKTK 299 Query: 291 HQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKE 350 HQIFLE E N+D +Y NG++TA+P +Q + ++TI GLE I+R GYA+EYDY + Sbjct: 300 HQIFLEMESENSDEIYVNGLTTAMPAFVQEKILKTIKGLENAKIMRHGYAVEYDYAPASQ 359 Query: 351 LFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGV 410 L+P+LE K+ISGLF AGQINGT+GYEEAAAQG +AG+N+A+K + R+++YIGV Sbjct: 360 LYPSLENKRISGLFFAGQINGTSGYEEAAAQGFIAGVNAAKKIKGEKPVIIDRSEAYIGV 419 Query: 411 MIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQ- 469 +IDDL K EPYR+ SRAEYR++LR DNA RL ++G + + + + K I Sbjct: 420 LIDDLIHKKTPEPYRVLPSRAEYRLTLRYDNAFMRLFDKIKEIGIVDKDKIEFLEKAIND 479 Query: 470 ---EYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDAR 526 E N L+++ S+ +K L S I ++ K A E L D S +L + + Sbjct: 480 VYMEINNLKNISVSMNEANKFLESLDIE-ERFVKGVKASEILKIKDISYDDLKTFL-NLN 537 Query: 527 KFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSI 586 + V +++ Y + R+ + ++ K E IP++ +Y + +SN + L+ Sbjct: 538 DYEDFVKNQIETMIKYEVFIERENKQIEKFKKLEHMYIPENINYDEIKGISNIARAGLNE 597 Query: 587 LKPFNLLQASKIEGMTPAALNLLLIYIK 614 ++P ++ +A++I G+T + L++ Y+K Sbjct: 598 VRPLSVGEATRISGVTSNDITLIIAYMK 625 >gi|237743153|ref|ZP_04573634.1| glucose inhibited division protein A [Fusobacterium sp. 7_1] gi|229433449|gb|EEO43661.1| glucose inhibited division protein A [Fusobacterium sp. 7_1] Length = 627 Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust. Identities = 242/627 (38%), Positives = 363/627 (57%), Gaps = 18/627 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +++ YDVIV+G GHAG EAA +A+LG AL+T TI MSCNP+IGG GK +LV E Sbjct: 1 MDKDYDVIVVGAGHAGVEAAFASARLGNKVALMTLYLDTISMMSCNPSIGGPGKSNLVTE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 ID L G MGR D +Q + LN KGPA R R QAD+ YR M+ ++ EN+ +IQ Sbjct: 61 IDVLGGEMGRHIDEFNLQLKDLNTSKGPAARITRGQADKYKYRRKMREKLEKTENISLIQ 120 Query: 122 G-----------EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIP 170 + + EK +I I + + +VL TGTFL+G I IG + Sbjct: 121 DCAEEILVEDIKDSQNLSYEKKVIG-IKTRLGIIYNAKAIVLATGTFLKGKIVIGDVTYS 179 Query: 171 AGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT 230 AGR G++ + L +S R +T TP RLD KTI + + E+ +E FS T Sbjct: 180 AGRQGETSAEKLSDSLRDLGIKIERYQTATPPRLDKKTIDFSQLEELKGEEHPRYFSIFT 239 Query: 231 DKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNG 290 K N + +T T+ +T +I E +K S I SG + ++GPR+CPSI+ K++ F ++ Sbjct: 240 KKERNNTVPTWLTYTSEKTIEVIKEMMKFSPIVSGMVNTHGPRHCPSIDRKVLNFPDKTK 299 Query: 291 HQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKE 350 HQIFLE E N+D +Y NG++TA+P +Q + ++TI GLE I+R GYA+EYDY + Sbjct: 300 HQIFLEMESENSDEIYVNGLTTAMPAFVQEKILKTIKGLENAKIMRHGYAVEYDYAPASQ 359 Query: 351 LFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGV 410 L+P+LE K+ISGLF AGQINGT+GYEEAAAQG +AG+N+A+K + R+++YIGV Sbjct: 360 LYPSLENKRISGLFFAGQINGTSGYEEAAAQGFIAGVNAAKKIKGEKPVIIDRSEAYIGV 419 Query: 411 MIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQ- 469 +IDDL K EPYR+ SRAEYR++LR DNA RL ++G + + + + K I Sbjct: 420 LIDDLIHKKTPEPYRVLPSRAEYRLTLRYDNAFMRLFDKIKEIGIVDKDKIEFLEKAIND 479 Query: 470 ---EYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDAR 526 E N L+++ S+ +K L S I ++ K A E L D S +L + + Sbjct: 480 VYMEINNLKNISVSMNEANKFLESLDIE-ERFVKGVKASEILKIKDVSYDDLKTFL-NLN 537 Query: 527 KFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSI 586 + V +++ Y + R+ + ++ K E IP++ +Y + +SN + L+ Sbjct: 538 DYEDFVKNQIETMIKYEVFIERENKQIEKFKKLEHMYIPENINYDEIKGISNIARAGLNE 597 Query: 587 LKPFNLLQASKIEGMTPAALNLLLIYI 613 ++P ++ +A++I G+T + L++ +I Sbjct: 598 VRPLSVGEATRISGVTSNDITLIIAHI 624 >gi|294660579|ref|NP_853425.2| tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [Mycoplasma gallisepticum str. R(low)] gi|298286832|sp|Q7NAK6|MNMG_MYCGA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|284812242|gb|AAP56993.2| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG (Glucose-inhibited division protein A) [Mycoplasma gallisepticum str. R(low)] gi|284930922|gb|ADC30861.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG (Glucose-inhibited division protein A) [Mycoplasma gallisepticum str. R(high)] Length = 611 Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust. Identities = 235/611 (38%), Positives = 350/611 (57%), Gaps = 6/611 (0%) Query: 9 IVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGL 68 IV+G GHAG EAA + +KL L + + CNP++GG KG + REIDAL G+ Sbjct: 5 IVVGAGHAGLEAAFILSKLNNKVYLCVLDRKYVANCPCNPSVGGPAKGIVTREIDALGGI 64 Query: 69 MGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFN 128 AD+ +Q ++LN KGP V+ R Q D+ Y+ +I + EN+++++GEV Sbjct: 65 QALAADSTALQRKILNSSKGPGVQCLRFQIDKVYYKKWFLEQIDNNENIELVEGEVTEVI 124 Query: 129 TEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMK 188 + + +++ + V++TTGT+L+ + GK G G SN+L F Sbjct: 125 KNGDTATGVMIDGVKKLEAGAVIITTGTYLKSLTFSGKDVKNEGPEGFKNSNNLSEWFKV 184 Query: 189 FDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNRQIECGITRTNL 247 F+ RLKTGTP R+ +I + + + + + FS + +K + ++ C + T Sbjct: 185 NGFELIRLKTGTPPRIKKDSIDYSNLQIEPGNGTELYFSHWSKNKYIDYELPCYLIHTTE 244 Query: 248 ETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYP 307 E H+II +N+ SA+YSG+I GPRYCPSIEDKIVRF + HQIFLEPE L D VY Sbjct: 245 EIHKIINDNLHLSAMYSGNITGVGPRYCPSIEDKIVRFSNKPRHQIFLEPESLELDTVYL 304 Query: 308 NGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAG 367 G ST+L +Q + IR +PGL+K +I+ GYAIEYD INP +L+P+LE+K I LF AG Sbjct: 305 GGFSTSLDISVQDKIIRLLPGLKKAEVIKYGYAIEYDAINPIQLYPSLESKLIKNLFFAG 364 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 QINGT+GYEEAA QGL+AGIN+ +K + + SR ++YIGVMIDD+ +KGV +PYR+ Sbjct: 365 QINGTSGYEEAAGQGLIAGINANQKIKNKEPLILSRDEAYIGVMIDDIVNKGVTDPYRLL 424 Query: 428 TSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKN 487 TSRAEYR+ LR DN +RL G ++G I + + + + +++ N L LK K Sbjct: 425 TSRAEYRLLLRNDNVLDRLIQKGYEIGTISKEQIDLYNQNLEKKNKLIEFLKD----KKV 480 Query: 488 LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICP-DARKFSSLVIERLQIESSYAAYT 546 T + + + YEFL P+ + L + D + +++ ++I Y Y Sbjct: 481 GMYTLLKAHTNNTNFSLYEFLKRPEIKLIELLKLIEFDYSNYDLELLKNIEITVKYEGYI 540 Query: 547 GRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAAL 606 ++ +K E IPKD Y + LS E +KL+ +KP NL QA +I G+ A + Sbjct: 541 KKESRIVNSLKNLESIKIPKDLIYDKVQNLSIEAIDKLNKIKPLNLAQAQRISGINLADI 600 Query: 607 NLLLIYIKKNT 617 L ++++N Sbjct: 601 ISLKTHLEQNA 611 >gi|294784391|ref|ZP_06749682.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Fusobacterium sp. 3_1_27] gi|294487963|gb|EFG35318.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Fusobacterium sp. 3_1_27] Length = 627 Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust. Identities = 246/630 (39%), Positives = 366/630 (58%), Gaps = 24/630 (3%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +++ YDVIV+G GHAG EAA +A+LG ALIT TI MSCNP+IGG GK +LV E Sbjct: 1 MDKDYDVIVVGAGHAGVEAAFASARLGNKVALITLYLDTISMMSCNPSIGGPGKSNLVTE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 ID L G MGR D +Q + LN KG A R R QAD+ YR M+ ++ EN+ +IQ Sbjct: 61 IDVLGGEMGRHIDEFNLQLKDLNTSKGSAARITRGQADKYKYRRKMREKLEKTENISLIQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCST--------------VVLTTGTFLRGVIHIGKL 167 V E +I S Q++S I+ T +VL TGTFL+G I IG + Sbjct: 121 DCVEEILVE-DIKDS---QNSSYIKKVTGIKTRLGIIYNAKAIVLATGTFLKGKIVIGDV 176 Query: 168 KIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFS 227 AGR G++ + L +S + R +T TP RLD KTI + + E+ +E FS Sbjct: 177 TYSAGRQGETSAEKLSDSLRELGIKIERYQTATPPRLDKKTIDFSQLEELRGEEHPRYFS 236 Query: 228 FMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGE 287 T K N + +T T+ ET ++ E +++S I SG + ++GPR+CPSI+ K++ F + Sbjct: 237 LFTKKEKNNTVPTWLTYTSEETIEVVREMMEYSPIVSGMVNTHGPRHCPSIDRKVLNFPD 296 Query: 288 RNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN 347 + HQIFLE E N+D +Y NG++TA+P +Q + +RTI GLE I+R GYA+EYDY Sbjct: 297 KTKHQIFLEMESENSDEIYVNGLTTAMPAFVQEKILRTIKGLENAKIMRHGYAVEYDYAP 356 Query: 348 PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSY 407 +L+P+LE K+ISGLF AGQINGT+GYEEAAAQG +AG+N+A+K I R+++Y Sbjct: 357 ASQLYPSLENKRISGLFFAGQINGTSGYEEAAAQGFIAGVNAAKKIKGEKPIIIDRSEAY 416 Query: 408 IGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKY 467 IGV+IDDL K EPYR+ SRAEYR++LR DNA RL ++G I + + + K Sbjct: 417 IGVLIDDLIHKKTPEPYRVLPSRAEYRLTLRYDNAFMRLFDKIKEVGIIDKDKIEFLEKA 476 Query: 468 IQ----EYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICP 523 I E N L+++ S+ + L S + ++ K A E L D S NL + Sbjct: 477 IDDVYMEINNLKNISVSMNEANNFLESLGVE-ERFVKGVKASEILKIKDVSYDNL-KVFL 534 Query: 524 DARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEK 583 + + V +++ Y + R+ + ++ K E IP++ +Y + +SN + Sbjct: 535 NLNDYEDFVKNQIETMIKYEIFIERENKQIEKFKKLEHMYIPENINYDEIKGISNIARAG 594 Query: 584 LSILKPFNLLQASKIEGMTPAALNLLLIYI 613 L+ ++P ++ +A++I G+T + L++ ++ Sbjct: 595 LNEVRPLSIGEATRISGVTSNDITLIIAHM 624 >gi|26553620|ref|NP_757554.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Mycoplasma penetrans HF-2] gi|38257609|sp|Q8EWN6|MNMG_MYCPE RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|26453626|dbj|BAC43958.1| glucose inhibited division protein [Mycoplasma penetrans HF-2] Length = 616 Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust. Identities = 240/616 (38%), Positives = 337/616 (54%), Gaps = 12/616 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YD +VIG GHAG EAA + AK AL +G+M CNP+IGG KG + REID Sbjct: 2 KKYDCLVIGAGHAGLEAAFILAKKKYKVALFVLDKKLVGNMPCNPSIGGPAKGIVTREID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G+ AD +Q ++LN KG R Q D+ Y I E +D+I E Sbjct: 62 ALGGMQAIAADNTQLQMKLLNSSKGAGTWALRAQIDKLEYSKWFLNRIEENEYIDLIDKE 121 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + + DN + +++TTGTFL IHIG I G + S L Sbjct: 122 VNSIKFVNQKVCGVYTVDNQFFESNYLIVTTGTFLDSSIHIGHKVIKKGPDDFNGSYLLA 181 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--NRQIECG 241 + DF T RLKTGTP R+ +I + K + + + FS K N+Q C Sbjct: 182 KQIKELDFQTIRLKTGTPPRILKNSIDYSKLQIEPGTNKKYSFSHFDRKFLDFNKQEVCY 241 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 + TN + H II N+ SA+YSG I GPRYCPSIEDK+VRF ++ HQ+F+EPE + Sbjct: 242 LAFTNNKIHEIINNNLDKSAMYSGFITGTGPRYCPSIEDKVVRFNDKERHQLFVEPESKH 301 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 D +Y G+S++LPE++Q Q ++ I G E I + YAIEYD INP +L+PTLETKKI Sbjct: 302 LDTIYLGGLSSSLPEDVQEQIVKNIVGFENAVIKKYAYAIEYDAINPIQLYPTLETKKIK 361 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQINGT+GYEEAA QGL+AGIN + + + R ++YIGV+I+DL +K + Sbjct: 362 GLFFAGQINGTSGYEEAACQGLMAGINVLCQLENREPLVLKRNEAYIGVLIEDLINKEIT 421 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 +PYR+ TSRAEYR+ LR DNAD RL G +LG I + + K ++ +N + LK L Sbjct: 422 DPYRLLTSRAEYRLELRNDNADQRLLKYGYELGLISQSHWDEYNKNLENFN---NTLKEL 478 Query: 482 -VLTSKNLSSTSISFKQDGK--TRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 T KN+ FK + + T YE L PD+S ++ + +++ I Sbjct: 479 ETSTLKNVK----EFKYNSRKTNTTLYEILKRPDYSFIDMEPFLKNKNTLDEYWKDKVDI 534 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 Y Y Q + K + + DY +P +S E ++KL+ +KP L QAS++ Sbjct: 535 YIKYGGYIKSQQKIINDTKNIDNIKLSSISDYKDVPNISLEARDKLNKVKPLTLGQASRV 594 Query: 599 EGMTPAALNLLLIYIK 614 G+ L + +Y++ Sbjct: 595 SGINLVDLINIKLYLE 610 >gi|269122708|ref|YP_003310885.1| glucose inhibited division protein A [Sebaldella termitidis ATCC 33386] gi|268616586|gb|ACZ10954.1| glucose inhibited division protein A [Sebaldella termitidis ATCC 33386] Length = 619 Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust. Identities = 240/617 (38%), Positives = 352/617 (57%), Gaps = 4/617 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +N YDVIV+G GHAG EAA +A+LG TAL T I MSCNP+IGG GK HLV E Sbjct: 1 MNTDYDVIVVGAGHAGVEAALASARLGMKTALFTIFIDNIAMMSCNPSIGGPGKSHLVSE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 + L G M R D+ +Q + LN KG A R R QAD+ YR+ M+ I QENL+V+Q Sbjct: 61 LGMLGGEMARHIDSYNLQLKNLNHTKGLAARITRAQADKYWYRIKMREIIEKQENLEVVQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G V+ + ++ + Q V+L TGTFL+G IG +K AGR G+ S Sbjct: 121 GIVSDLILDGKKVTGVKDQVGIEYGAKAVILCTGTFLKGRFIIGDVKYEAGRQGEQSSEE 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L + ++ F+ R +T TP R+D +TI + + E+ +E FS+ T K N + Sbjct: 181 LSDRLREYGFEVDRYQTATPPRIDKRTINFSEIEELKGEENPRYFSYYTLKEENSVMPTW 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T T ET R+ E +K+S I +G + S GPR+CPS++ K++RF E+ HQIFLE E Sbjct: 241 LTYTTPETIRVASELLKYSPIVTGIVSSKGPRHCPSLDRKVLRFPEKTDHQIFLEQESTE 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 ++ +Y NG +TA+P Q ++TI GLE I+R GYA+EYDYI +L TLETK + Sbjct: 301 SNEIYINGFTTAMPPFAQDAMLKTIKGLENAKIMRYGYAVEYDYIPANQLKLTLETKVLE 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 L+ AG INGT+GYEEAA QG +A +N+ RK + R++ Y GV+IDD+ +K Sbjct: 361 NLYTAGTINGTSGYEEAAVQGFMASVNAVRKIKGQSPVIIDRSEGYTGVLIDDIINKDTP 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ SRAEYR++LR DN RL ++G + + + + +E L+++ Sbjct: 421 EPYRVLPSRAEYRLTLRQDNVFLRLLDKAREIGILDKEKLEELENAKKEIEKELERLRNI 480 Query: 482 -VLTSKNLSSTSISFKQDGKTR--TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 V +K + IS D +A+EFL+ + + L + K S +V E+++I Sbjct: 481 TVYPTKENNEILISLGHDTMNNPVSAFEFLARKEMTYDGLARFI-ETEKLSKIVKEQVEI 539 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 S Y + R+ + ++ K E+ +IPKD DY + +SN L +P + QAS+I Sbjct: 540 NSKYKIFIDREKNQIEKFKKLEEMIIPKDTDYEKIKGISNIAISGLVYSQPETIGQASRI 599 Query: 599 EGMTPAALNLLLIYIKK 615 G+T + LL+ +IK+ Sbjct: 600 SGITHNDMTLLIAFIKE 616 >gi|237738572|ref|ZP_04569053.1| glucose inhibited division protein A [Fusobacterium sp. 2_1_31] gi|229424055|gb|EEO39102.1| glucose inhibited division protein A [Fusobacterium sp. 2_1_31] Length = 627 Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust. Identities = 242/627 (38%), Positives = 363/627 (57%), Gaps = 18/627 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +++ YDVIV+G GHAG EAA +A+LG ALIT TI MSCNP+IGG GK +LV E Sbjct: 1 MDKDYDVIVVGAGHAGVEAALASARLGNKVALITLYLDTISMMSCNPSIGGPGKSNLVTE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 ID L G MGR D +Q + LN KGPA R R QAD+ YR M+ ++ EN+ +IQ Sbjct: 61 IDVLGGEMGRHIDEFNLQLKDLNTSKGPAARITRGQADKYKYRKKMREKLEKTENISLIQ 120 Query: 122 GEV-----------AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIP 170 V + EK +I + + + +VL TGTFL+G I IG + Sbjct: 121 DCVEEILVEDIKDRQNLSYEKKVIG-VKTRLGLIYNTKAIVLATGTFLKGKIVIGDVTYS 179 Query: 171 AGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT 230 AGR G++ + L +S + R +T TP RLD KTI + + E+ +E FS T Sbjct: 180 AGRQGETSAEKLSDSLRELGIKIERYQTATPPRLDKKTIDFSQLEELKGEEHPRYFSIFT 239 Query: 231 DKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNG 290 K N + +T T+ ET ++ + +K+S I SG + ++GPR+CPSI+ K++ F E+ Sbjct: 240 KKEKNNTVPTWLTYTSEETIEVVRDMMKYSPIVSGMVNTHGPRHCPSIDRKVLNFPEKTK 299 Query: 291 HQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKE 350 HQIFLE E N+D +Y NG++TA+P +Q + +RTI GLE I+R GYA+EYDY + Sbjct: 300 HQIFLEMESENSDEIYVNGLTTAMPAFVQEKILRTIKGLENAKIMRHGYAVEYDYAPASQ 359 Query: 351 LFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGV 410 L+P+LE KKISGLF +GQINGT+GYEEAAAQG +AG+N+A+K + + R+++YIGV Sbjct: 360 LYPSLENKKISGLFFSGQINGTSGYEEAAAQGFIAGVNAAKKIKGEEPVIIDRSEAYIGV 419 Query: 411 MIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQ- 469 +IDDL K EPYR+ SRAEYR++LR DNA RL ++G + + + + K I Sbjct: 420 LIDDLIHKKTPEPYRVLPSRAEYRLTLRYDNAFMRLFNKIKEVGIVDKDKIEFLEKSINN 479 Query: 470 ---EYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDAR 526 E N L+++ S+ + L S I K K A E L D + +L + + Sbjct: 480 VYTEINNLKNISVSMNDANNFLESLGIEEKF-VKGVKASEILKIKDVNYDDLKAFL-NLN 537 Query: 527 KFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSI 586 + V +++ Y + R+ + ++ K E I K+ +Y + +SN + L+ Sbjct: 538 DYEDFVKNQIETMIKYEIFIERENKQIEKFKKLEHMYIDKNINYDDIKGISNIARAGLNE 597 Query: 587 LKPFNLLQASKIEGMTPAALNLLLIYI 613 ++P ++ +A++I G+T + L++ ++ Sbjct: 598 VRPLSIGEATRISGVTSNDITLIIAHM 624 >gi|34763012|ref|ZP_00143988.1| Glucose inhibited division protein A [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27887313|gb|EAA24407.1| Glucose inhibited division protein A [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 627 Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust. Identities = 241/631 (38%), Positives = 362/631 (57%), Gaps = 26/631 (4%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +++ YDVIV+G GHAG EAA +A+LG ALIT TI MSCNP+IGG GK +LV E Sbjct: 1 MDKDYDVIVVGAGHAGVEAAFASARLGNKVALITLYLDTISMMSCNPSIGGPGKSNLVTE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 ID L G MGR D +Q + LN KGPA R R QAD+ YR M+ ++ +N+ +IQ Sbjct: 61 IDVLGGEMGRHIDEFNLQLKDLNTSKGPAARITRGQADKYKYRRKMREKLEKTQNISLIQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNS---------------MIRCSTVVLTTGTFLRGVIHIGK 166 E+ ++ I NS + +VL TGTFL+G I IG Sbjct: 121 D-----CAEEILVEDIKDSQNSSYEKKVTGIKTRLGIIYNAKAIVLATGTFLKGKIVIGD 175 Query: 167 LKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPF 226 + AGR G++ + L +S + R +T TP RLD KTI + + E+ +E F Sbjct: 176 VTYSAGRQGETSAEKLSDSLRELGVKIERYQTATPPRLDKKTIDFSQLEELRGEEHPRYF 235 Query: 227 SFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFG 286 S T K N + +T T+ ET ++ E +K S I SG + ++GPR+CPSI+ K++ F Sbjct: 236 SLFTKKEKNNTVPTWLTYTSKETIEVVREMMKFSPIVSGMVNTHGPRHCPSIDRKVLNFP 295 Query: 287 ERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI 346 ++ HQIFLE E N+D +Y NG++TA+P +Q + ++TI GLE I+R GYA+EYDY Sbjct: 296 DKTKHQIFLEMESENSDEIYVNGLTTAMPAFVQEKILKTIKGLENAKIMRHGYAVEYDYA 355 Query: 347 NPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDS 406 +L+P+LE K+ISGLF AGQINGT+GYEEAAAQG +AG+N+A+K + R+++ Sbjct: 356 PASQLYPSLENKRISGLFFAGQINGTSGYEEAAAQGFIAGVNAAKKIKGEKPVIIDRSEA 415 Query: 407 YIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAK 466 YIGV+IDDL K EPYR+ SRAEYR++LR DNA RL ++G + + K K Sbjct: 416 YIGVLIDDLIHKKTPEPYRVLPSRAEYRLTLRYDNAFMRLFDKIKEVGIVDRDKIKFLEK 475 Query: 467 YIQ----EYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSIC 522 I E N L+++ S+ ++ L + I ++ K A E L D S NL + Sbjct: 476 SINDVYMEINNLKNISVSMNEANRFLENLGIE-ERFVKGVKASEILKIKDVSYDNL-KVF 533 Query: 523 PDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKE 582 + + V +++ Y + R+ + ++ K E IP++ +Y + +SN + Sbjct: 534 LNLDDYEDFVKNQIETMIKYEIFIERENKQIEKFKKLEHMYIPENINYDEIKGISNIARA 593 Query: 583 KLSILKPFNLLQASKIEGMTPAALNLLLIYI 613 L+ ++P ++ +A++I G+T + L++ ++ Sbjct: 594 GLNEVRPLSIGEATRISGVTSNDITLIIAHM 624 >gi|294781804|ref|ZP_06747137.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Fusobacterium sp. 1_1_41FAA] gi|294481914|gb|EFG29682.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Fusobacterium sp. 1_1_41FAA] Length = 627 Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust. Identities = 240/636 (37%), Positives = 360/636 (56%), Gaps = 36/636 (5%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +++ YDVIV+G GHAG EAA +A+LG ALIT TI MSCNP+IGG GK +LV E Sbjct: 1 MDKDYDVIVVGAGHAGVEAALASARLGNKVALITLYLDTISMMSCNPSIGGPGKSNLVTE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 ID L G MGR D +Q + LN KGPA R R QAD+ YR M+ ++ EN+ +IQ Sbjct: 61 IDVLGGEMGRHIDEFNLQLKDLNTSKGPAARITRGQADKYKYRKKMREKLEKNENISLIQ 120 Query: 122 GEV-----------AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIP 170 V + EK +I + + + +VL TGTFL+G I IG + Sbjct: 121 DCVEEILVEDIKDRQNLSYEKKVIG-VKTRLGLIYNTKAIVLATGTFLKGKIVIGDITYS 179 Query: 171 AGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT 230 AGR G++ + L +S + R +T TP RLD KTI + + E+ +E FS T Sbjct: 180 AGRQGETSAEKLSDSLRELGIKIERYQTATPPRLDKKTIDFSQLEELKGEEHPRYFSIFT 239 Query: 231 DKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNG 290 K N + +T T+ ET ++ + +K+S I SG + ++GPR+CPSI+ K++ F E+ Sbjct: 240 KKEKNNTVPTWLTYTSEETIEVVRDMMKYSPIVSGMVNTHGPRHCPSIDRKVLNFPEKAK 299 Query: 291 HQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKE 350 HQIFLE E N+D +Y NG++TA+P +Q + +RTI GLE I+R GYA+EYDY + Sbjct: 300 HQIFLEMESENSDEIYVNGLTTAMPAFVQEKILRTIKGLENAKIMRHGYAVEYDYAPASQ 359 Query: 351 LFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGV 410 L+P+LE KKISGLF +GQINGT+GYEEAAAQG +AG+N+A+K + + R+++YIGV Sbjct: 360 LYPSLENKKISGLFFSGQINGTSGYEEAAAQGFIAGVNAAKKIKGEEPVIIDRSEAYIGV 419 Query: 411 MIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQE 470 +IDDL K EPYR+ SRAEYR++LR DNA RL ++G + + R Sbjct: 420 LIDDLIHKKTPEPYRVLPSRAEYRLTLRYDNAFMRLFDKIKEVGIVDKDR---------- 469 Query: 471 YNFLRSLLKSLVLTSKNLSSTSISFKQDG-------------KTRTAYEFLSYPDFSIQN 517 FL++ + ++ NL + SIS K A E L D + + Sbjct: 470 IEFLKNSINNVYTEINNLKNISISMNDANNFLESLGIEEKFVKGVKASEILKIKDVNYDD 529 Query: 518 LFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALS 577 L + + + V +++ Y + R+ + ++ K E I K+ +Y + +S Sbjct: 530 LKTFL-NLNDYEDFVKNQIETMIKYEIFIERENKQIEKFKKLEHMYIDKNINYDDIKGIS 588 Query: 578 NELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYI 613 N + L+ ++P ++ +A++I G+T + L++ ++ Sbjct: 589 NIARAGLNEVRPLSIGEATRISGVTSNDITLIIAHM 624 >gi|254302387|ref|ZP_04969745.1| glucose inhibited division protein A [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148322579|gb|EDK87829.1| glucose inhibited division protein A [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 628 Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust. Identities = 241/631 (38%), Positives = 361/631 (57%), Gaps = 26/631 (4%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +++ YDVIV+G GHAG EAA +A+LG TAL+T TI MSCNP+IGG GK +LV E Sbjct: 1 MDKDYDVIVVGAGHAGVEAAFASARLGNKTALMTLYLDTISMMSCNPSIGGPGKSNLVTE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 ID L G MGR D +Q + LN KGPA R R QAD+ YR M+ ++ EN+ +IQ Sbjct: 61 IDVLGGEMGRHIDEFNLQLKDLNTSKGPAARITRGQADKYQYRRKMREKLEKTENISLIQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNS---------------MIRCSTVVLTTGTFLRGVIHIGK 166 E+ ++ I NS + +VL TGTFL+G I IG Sbjct: 121 D-----CAEEILVEDIKDSQNSSYIKKVTGIKTRLGIIYNAKAIVLATGTFLKGKIVIGD 175 Query: 167 LKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPF 226 + AGR G++ + L +S + R +T TP RLD KTI + + E+ +E F Sbjct: 176 ITYSAGRQGETSAEKLSDSLRELGIKIERYQTATPPRLDKKTIDFSQLEELRGEEHPRYF 235 Query: 227 SFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFG 286 S T K N + +T T+ ET ++ E +++S I SG + ++GPR+CPSI+ K++ F Sbjct: 236 SLFTKKEKNNTVPTWLTYTSEETIEVVREMMEYSPIVSGMVNTHGPRHCPSIDRKVLNFP 295 Query: 287 ERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI 346 ++ HQIFLE E N+D +Y NG++TA+P +Q + +RTI GLE I+R GYA+EYDY Sbjct: 296 DKAKHQIFLEMESENSDEIYVNGLTTAMPAFVQEKILRTIKGLENAKIMRHGYAVEYDYA 355 Query: 347 NPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDS 406 +L+P+LE KKISGLF +GQINGT+GYEEAAAQG +AG+N+A+K + R+++ Sbjct: 356 PASQLYPSLENKKISGLFFSGQINGTSGYEEAAAQGFIAGVNAAKKIKGEKPVIIDRSEA 415 Query: 407 YIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAK 466 YIGV+IDDL K EPYR+ SRAEYR++LR DN RL ++G I + + + K Sbjct: 416 YIGVLIDDLIHKKTPEPYRVLPSRAEYRLTLRYDNTFMRLFEKIKEVGIIDKDKIEFLEK 475 Query: 467 YIQ----EYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSIC 522 I E N L+++ S+ + L S + ++ K A E L D S +L Sbjct: 476 SINNVYMEINNLKNISVSMNEANNFLESLGVE-ERFVKGVKASEILKIKDVSYDDLKGFL 534 Query: 523 PDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKE 582 + + V +++ Y + R+ + ++ K E IP++ DY + +SN + Sbjct: 535 -NLNDYEDFVKNQIETMIKYEIFIERENKQIEKFKKLEHMYIPENIDYDEIKGISNIARA 593 Query: 583 KLSILKPFNLLQASKIEGMTPAALNLLLIYI 613 L ++P ++ +A++I G+T + L++ ++ Sbjct: 594 GLDEVRPLSIGEATRISGVTSNDITLIIAHM 624 >gi|237741001|ref|ZP_04571482.1| glucose inhibited division protein A [Fusobacterium sp. 4_1_13] gi|229431045|gb|EEO41257.1| glucose inhibited division protein A [Fusobacterium sp. 4_1_13] Length = 627 Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust. Identities = 243/631 (38%), Positives = 361/631 (57%), Gaps = 26/631 (4%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +++ YDVIV+G GHAG EAA +A+LG ALIT TI MSCNP+IGG GK +LV E Sbjct: 1 MDKDYDVIVVGAGHAGVEAAFASARLGNKVALITLYLDTISMMSCNPSIGGPGKSNLVTE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 ID L G MGR D +Q + LN KGPA R R QAD+ YR M+ ++ EN+ +IQ Sbjct: 61 IDVLGGEMGRHIDEFNLQLKDLNTSKGPAARITRGQADKYKYRRKMREKLEKTENISLIQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNS---------------MIRCSTVVLTTGTFLRGVIHIGK 166 E+ ++ I NS + +VL TGTFL+G I IG Sbjct: 121 D-----CAEEILVEDIKDSQNSSYVKKVTGIKTRLGIIYNAKAIVLATGTFLKGKIVIGD 175 Query: 167 LKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPF 226 + AGR G++ + L +S + R +T TP RLD KTI + + E+ +E F Sbjct: 176 VTYSAGRQGETSAEKLSDSLRELGIKIERYQTATPPRLDKKTIDFSQLEELRGEEHPRYF 235 Query: 227 SFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFG 286 S T K N + +T T+ ET ++ E +K S I SG + ++GPR+CPSI+ K++ F Sbjct: 236 SLFTKKEKNNTVPTWLTYTSKETIEVVREMMKFSPIVSGMVNTHGPRHCPSIDRKVLNFP 295 Query: 287 ERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI 346 ++ HQIFLE E N+D +Y NG++TA+P +Q + ++TI GLE I+R GYA+EYDY Sbjct: 296 DKAKHQIFLEMESENSDEIYVNGLTTAMPAFVQEKILKTIKGLENAKIMRHGYAVEYDYA 355 Query: 347 NPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDS 406 +L+P+LE K+ISGLF AGQINGT+GYEEAAAQG +AG+N+A+K + R+++ Sbjct: 356 PASQLYPSLENKRISGLFFAGQINGTSGYEEAAAQGFIAGVNAAKKIKGEKPVIIDRSEA 415 Query: 407 YIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAK 466 YIGV+IDDL K EPYR+ SRAEYR++LR DNA RL ++G + + K K Sbjct: 416 YIGVLIDDLIHKKTPEPYRVLPSRAEYRLTLRYDNAFMRLFDKIKEVGIVDRDKIKFLEK 475 Query: 467 YIQ----EYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSIC 522 I E N L+++ S+ +K L + I ++ K A E L D S NL + Sbjct: 476 SISDVYTEINNLKNISVSMNAANKFLENLGIE-ERFVKGVKASEILKIKDVSYDNL-KVF 533 Query: 523 PDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKE 582 + + V +++ Y + R+ + ++ K E I ++ +Y + +SN K Sbjct: 534 LNLDDYEDFVKNQIETMIKYEIFIERENKQIEKFKKLEHMYILENINYDEIKGISNIAKA 593 Query: 583 KLSILKPFNLLQASKIEGMTPAALNLLLIYI 613 L+ ++P ++ +A++I G+T + L++ ++ Sbjct: 594 GLNEVRPLSIGEATRISGVTSNDITLIIAHM 624 >gi|323333595|gb|EGA74988.1| Mto1p [Saccharomyces cerevisiae AWRI796] Length = 532 Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust. Identities = 218/518 (42%), Positives = 324/518 (62%), Gaps = 19/518 (3%) Query: 107 MQREILSQE---NLDVIQGEVAGF-----NTEKNIISSIVMQDNSMIRCSTVVLTTGTFL 158 MQRE+ ++ NL ++Q +VA +I +V+ D + + V++TTGTFL Sbjct: 1 MQRELSDKKAHPNLYLLQNKVADLILYDPGCGHKVIKGVVLDDGTQVGADQVIITTGTFL 60 Query: 159 RGVIHIGKLKIPAGRMGDSPSNSLFNSFM-KFDFDTGRLKTGTPARLDGKTIIWDKTEKQ 217 IHIG +I AGR+G+ P+ + N+ + F GRLKTGTPARL ++I + E Q Sbjct: 61 SAEIHIGDKRIAAGRIGEQPTYGISNTLQNEVGFQLGRLKTGTPARLAKESIDFSALEVQ 120 Query: 218 FADERLIPFSFMTDKIT---NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRY 274 DE +P SF+ + ++ +Q++C T T + H + N+ H +I+ D GPRY Sbjct: 121 KGDELPVPMSFLNETVSVEPTKQLDCFGTHTTPQMHDFLRNNL-HQSIHIQDTTIKGPRY 179 Query: 275 CPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNI 334 CPSIE KI+RF +R+ H+I+LEPEG N+DV+YPNGIS ++PE++Q Q +R IPG+ V I Sbjct: 180 CPSIEAKILRFPDRSSHKIWLEPEGFNSDVIYPNGISNSMPEDVQLQMMRLIPGMANVEI 239 Query: 335 IRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKS- 393 ++P Y +EYDY++P++L P+LETK + GLFLAGQINGTTGYEEAAAQG++AGIN+ S Sbjct: 240 LQPAYGVEYDYVDPRQLKPSLETKLVDGLFLAGQINGTTGYEEAAAQGIIAGINAGLLSR 299 Query: 394 NKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKL 453 + + + R+ +YIGV+IDDL + GV+EPYRMFTSR+E+RIS+R DNAD RLTPIG +L Sbjct: 300 QEREQLVLKRSQAYIGVLIDDLINNGVIEPYRMFTSRSEFRISVRADNADFRLTPIGAQL 359 Query: 454 GCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSS-TSISFKQDGKTRTAYEFLSYPD 512 G I R ++++ Y+ L++ L+S+ SS + + R+A+E + D Sbjct: 360 GIISPVRLSQYSRDKHLYDETIRALQNFKLSSQKWSSLLQANIAPQAENRSAWEIFRFKD 419 Query: 513 FSIQNLFSICPDAR----KFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDF 568 + L+ PD V+ ++ I+ Y Y +Q K + +E L+P+D+ Sbjct: 420 MDLHKLYECIPDLPINLLDIPMHVVTKINIQGKYEPYIVKQNQFVKAFQADENMLLPQDY 479 Query: 569 DYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAAL 606 DY LP LS E K L+ ++P + QA +I+G+T AAL Sbjct: 480 DYRQLPTLSTECKLLLNRVQPLTIGQARRIQGITAAAL 517 >gi|323337734|gb|EGA78978.1| Mto1p [Saccharomyces cerevisiae Vin13] gi|323348736|gb|EGA82977.1| Mto1p [Saccharomyces cerevisiae Lalvin QA23] gi|323355163|gb|EGA86991.1| Mto1p [Saccharomyces cerevisiae VL3] Length = 532 Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust. Identities = 217/518 (41%), Positives = 324/518 (62%), Gaps = 19/518 (3%) Query: 107 MQREILSQE---NLDVIQGEVAGF-----NTEKNIISSIVMQDNSMIRCSTVVLTTGTFL 158 MQRE+ ++ NL ++Q +VA +I +V+ D + + V++TTGTFL Sbjct: 1 MQRELSDKKAHPNLSLLQNKVADLILYDPGCGHKVIKGVVLDDGTQVGADQVIITTGTFL 60 Query: 159 RGVIHIGKLKIPAGRMGDSPSNSLFNSFM-KFDFDTGRLKTGTPARLDGKTIIWDKTEKQ 217 IHIG +I AGR+G+ P+ + N+ + F GRLKTGTPARL ++I + E Q Sbjct: 61 SAEIHIGDKRIAAGRIGEQPTYGISNTLQNEVGFQLGRLKTGTPARLAKESIDFSALEVQ 120 Query: 218 FADERLIPFSFMTDKIT---NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRY 274 D+ +P SF+ + ++ +Q++C T T + H + N+ H +I+ D GPRY Sbjct: 121 KGDKLPVPMSFLNETVSVEPTKQLDCFGTHTTPQMHDFLRNNL-HQSIHIQDTTIKGPRY 179 Query: 275 CPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNI 334 CPSIE KI+RF +R+ H+I+LEPEG N+DV+YPNGIS ++PE++Q Q +R IPG+ V I Sbjct: 180 CPSIEAKILRFPDRSSHKIWLEPEGFNSDVIYPNGISNSMPEDVQLQMMRLIPGMANVEI 239 Query: 335 IRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKS- 393 ++P Y +EYDY++P++L P+LETK + GLFLAGQINGTTGYEEAAAQG++AGIN+ S Sbjct: 240 LQPAYGVEYDYVDPRQLKPSLETKLVDGLFLAGQINGTTGYEEAAAQGIIAGINAGLLSR 299 Query: 394 NKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKL 453 + + + R+ +YIGV+IDDL + GV+EPYRMFTSR+E+RIS+R DNAD RLTPIG +L Sbjct: 300 QEREQLVLKRSQAYIGVLIDDLINNGVIEPYRMFTSRSEFRISVRADNADFRLTPIGAQL 359 Query: 454 GCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSS-TSISFKQDGKTRTAYEFLSYPD 512 G I R ++++ Y+ L++ L+S+ SS + + R+A+E + D Sbjct: 360 GIISPVRLSQYSRDKHLYDETIRALQNFKLSSQKWSSLLQANIAPQAENRSAWEIFRFKD 419 Query: 513 FSIQNLFSICPDAR----KFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDF 568 + L+ PD V+ ++ I+ Y Y +Q K + +E L+P+D+ Sbjct: 420 MDLHKLYECIPDLPINLLDIPMHVVTKINIQGKYEPYIVKQNQFVKAFQADENMLLPQDY 479 Query: 569 DYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAAL 606 DY LP LS E K L+ ++P + QA +I+G+T AAL Sbjct: 480 DYRQLPTLSTECKLLLNRVQPLTIGQARRIQGITAAAL 517 >gi|213615933|ref|ZP_03371759.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 388 Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust. Identities = 205/388 (52%), Positives = 264/388 (68%), Gaps = 1/388 (0%) Query: 44 MSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELY 103 MSCNP IGG+GKGHLV+E+DAL GLM + D AGIQF++LN KGPAVR R QADR LY Sbjct: 1 MSCNPTIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFKILNASKGPAVRATRAQADRVLY 60 Query: 104 RLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIH 163 R A++ + +Q NL + Q V E + + V Q R VVLT GTFL G IH Sbjct: 61 RQAVRIALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIH 120 Query: 164 IGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERL 223 IG GR GD PS L + RLKTGTP R+D +TI + +Q D + Sbjct: 121 IGLDNYSGGRAGDPPSIPLSRRLRELPLRVSRLKTGTPPRIDARTIDFSVLAQQHGDNPM 180 Query: 224 IPFSFMTDKITN-RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKI 282 FSFM + + +Q+ C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK+ Sbjct: 181 PVFSFMGNAFQHPQQVPCYITHTNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKV 240 Query: 283 VRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIE 342 +RF +RN HQIFLEPEGL ++ +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIE Sbjct: 241 MRFADRNQHQIFLEPEGLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIE 300 Query: 343 YDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFS 402 YD+ +P++L PTLE+K I GLF AGQINGTTGYEEAAAQGL+AG+N+AR S + + Sbjct: 301 YDFFDPRDLKPTLESKFIHGLFFAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPA 360 Query: 403 RTDSYIGVMIDDLTSKGVLEPYRMFTSR 430 R+ +Y+GV++DDL + G EPYRMFTSR Sbjct: 361 RSQAYLGVLVDDLCTLGTKEPYRMFTSR 388 >gi|82915018|ref|XP_728939.1| glucose inhibited division protein A [Plasmodium yoelii yoelii str. 17XNL] gi|23485627|gb|EAA20504.1| Glucose inhibited division protein A [Plasmodium yoelii yoelii] Length = 842 Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust. Identities = 245/571 (42%), Positives = 326/571 (57%), Gaps = 90/571 (15%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIGGGH+GCEA+ ++AKLGA T LIT +IG MSCNP+IGG+GKG LV+EID Sbjct: 44 KKYDVIVIGGGHSGCEASYISAKLGAKTLLITQCKESIGEMSCNPSIGGIGKGILVKEID 103 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL GLMG+V D +GI F++LN+KKG AVRG R QADR+LY M+ + + NL +++ Sbjct: 104 ALGGLMGKVIDKSGIHFKILNLKKGLAVRGHRAQADRDLYNYYMKEYMFNMPNLYILENT 163 Query: 124 VAGFNTEKNII--SSIVMQDNS------------MIRCS------TVVLTTGTFLRGVIH 163 V E ++ S M +N +CS V+LTTGTFL G+ H Sbjct: 164 VHSLLIENSMTRNDSTNMDENMEEKKKCKYVYGIKNKCSCEFYADNVILTTGTFLGGICH 223 Query: 164 IGKLKIPAGR------------MGDSPS-------------------------------- 179 IGK K GR + D+ S Sbjct: 224 IGKDKYKGGRIKRILGKGKDNQLKDASSIEPSKIKEEMNKNKMQKINYIHNYIENNKNGV 283 Query: 180 --NSLFNSFMK------------FDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP 225 NS+F++ ++ +F+ R+KTGTP RL +I +D EK+ E+ P Sbjct: 284 EQNSIFDNLIEESTKNLATQLKENNFEIKRMKTGTPPRLCKNSINFDILEKE-GTEKKHP 342 Query: 226 FSFM---TDKITN-RQIECGITRTNLETHRIIMENIKHSAIYSG-DIKSYGPRYCPSIED 280 F F ++KI N + + C T TN++TH ++++ + + D GPRYCPSI Sbjct: 343 FYFSFLNSNKINNNKTLPCYKTYTNIKTHELVIKYLNELPDFDCYDKLGNGPRYCPSIAK 402 Query: 281 KIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYA 340 K+ +F E+ H I+LEPEG N ++YPNG+S+A P Q + I +I GLE I+ P Y Sbjct: 403 KVTKFSEKKKHIIWLEPEGFNNILIYPNGLSSAYPLNRQQEIINSIKGLENAKILFPAYD 462 Query: 341 IEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNK----- 395 +EY Y+NPK L TLETK I+GLFL+GQI GTTGYEEAA QG+VAGIN+A S K Sbjct: 463 VEYFYVNPKCLNYTLETKIINGLFLSGQICGTTGYEEAACQGIVAGINAALNSLKKKNIS 522 Query: 396 -LDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLG 454 ++ +R DSYIGV+I DL +KG+ EPYRMFTSRAEYR+ LRPDNAD RLTP KLG Sbjct: 523 SINNFVLTRNDSYIGVLIHDLINKGITEPYRMFTSRAEYRLYLRPDNADIRLTPKAEKLG 582 Query: 455 CIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 + R N + S+ K L L + Sbjct: 583 IASKERLYILNHKYYSVNKIISIFKKLTLNN 613 >gi|284931678|gb|ADC31616.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG (Glucose-inhibited division protein A) [Mycoplasma gallisepticum str. F] Length = 611 Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust. Identities = 232/611 (37%), Positives = 349/611 (57%), Gaps = 6/611 (0%) Query: 9 IVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGL 68 IV+G GHAG EAA + +KL L + + CNP++GG KG + REIDAL G+ Sbjct: 5 IVVGAGHAGLEAAFILSKLNNKVYLCVLDRKYVANCPCNPSVGGPAKGIVTREIDALGGI 64 Query: 69 MGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFN 128 AD+ +Q ++LN KGP V+ R Q D+ Y+ +I + EN+++++GEV Sbjct: 65 QALAADSTALQRKILNSSKGPGVQCLRFQIDKVYYKKWFLEQIDNNENIELVEGEVTEVI 124 Query: 129 TEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMK 188 + + +++ + V++TTGT+L+ + GK G G SN+L F Sbjct: 125 KNGDTATGVMIDGVKKLEAGAVIITTGTYLKSLTFSGKDVKNEGPEGFKNSNNLSEWFKV 184 Query: 189 FDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNRQIECGITRTNL 247 F+ RLKTGTP R+ +I + + + + + FS + +K + ++ C + T Sbjct: 185 NGFELIRLKTGTPPRIKKDSIDYSNLQIEPGNGTELYFSHWSKNKYIDYELPCYLIHTTE 244 Query: 248 ETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYP 307 E H+II +N+ SA+YSG+I GPRYCPSIEDKI+RF + HQIFLEPE L D VY Sbjct: 245 EIHKIINDNLHLSAMYSGNITGVGPRYCPSIEDKIIRFSNKPRHQIFLEPESLELDTVYL 304 Query: 308 NGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAG 367 G ST+L +Q + IR +PGL+K +I+ GYAIEYD INP +L+P+LE+K + LF AG Sbjct: 305 GGFSTSLDISVQDKIIRLLPGLKKAEVIKYGYAIEYDAINPIQLYPSLESKLVKNLFFAG 364 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 QINGT+GYEEAA QGL+AGIN+ +K + + SR ++YIGVMIDD+ +KGV +PYR+ Sbjct: 365 QINGTSGYEEAAGQGLIAGINANQKIKNKEPLILSRDEAYIGVMIDDIVTKGVTDPYRLL 424 Query: 428 TSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKN 487 TSRAEYR+ LR DN +RL G ++G I + + + + ++ N L LK K Sbjct: 425 TSRAEYRLLLRNDNVLDRLIQKGYEIGTISKEQIDLYNQNLERKNKLIEFLKD----KKV 480 Query: 488 LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICP-DARKFSSLVIERLQIESSYAAYT 546 T + + + YEFL P+ + L + D + +++ ++I Y Y Sbjct: 481 GMYTLLRAHTNNTNFSLYEFLKRPEIKLIELLKLIEFDYSNYDLELLKNIEITVKYEGYI 540 Query: 547 GRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAAL 606 ++ +K E IP+D Y + LS E +KL+ +KP NL QA +I G+ A + Sbjct: 541 KKESRIVNSLKNLESIKIPQDLIYDKVQNLSIEAIDKLNKIKPLNLAQAQRISGINLADI 600 Query: 607 NLLLIYIKKNT 617 L ++++N Sbjct: 601 ISLKTHLEQNA 611 >gi|237736116|ref|ZP_04566597.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG 1 [Fusobacterium mortiferum ATCC 9817] gi|229421827|gb|EEO36874.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG 1 [Fusobacterium mortiferum ATCC 9817] Length = 615 Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust. Identities = 236/617 (38%), Positives = 359/617 (58%), Gaps = 6/617 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + + YDVIV+GGGHAG EAA +A+LG TA+ T TI MSCNP+IGG GK +LV E Sbjct: 1 MKKIYDVIVVGGGHAGVEAALASARLGKDTAIFTLYLDTIAMMSCNPSIGGPGKSNLVAE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +D L G MG+ D +Q + LN KGPA R R QAD+ LYR M++++ +NL +IQ Sbjct: 61 MDILGGEMGKHTDEFNLQLKHLNESKGPAARITRGQADKYLYRTEMRKKLEHTDNLHMIQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V + I + + VVL TGTFL+G I IG + AGR G+ + Sbjct: 121 DCVEQIIVDDGEIKGVRTRLGISYFAKAVVLCTGTFLKGKIVIGDVIYSAGRQGEQSAEK 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L +S R +T TP RLD ++I + K E+ +E FS T+K N + Sbjct: 181 LSDSLRDHGIHIERYQTATPPRLDRRSIDFSKMEELKGEEHPRYFSIFTNKERNNVVPTW 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T T +T + E +K+S I SG I+++GPR+CPS++ K++ F ++ HQIFLE E + Sbjct: 241 LTHTTEKTIEVAKEMLKYSPIVSGIIETHGPRHCPSLDRKVLNFPDKTNHQIFLELESAD 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 ++ +Y NG++TA+P Q +RTI GLE I+R GYA+EYDY +L+P+LE+KKI+ Sbjct: 301 SEEIYVNGLTTAMPPFAQEAMMRTIAGLENAKIMRHGYAVEYDYAPASQLYPSLESKKIA 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQINGT+GYEEAA QG +AG+N+ARK + + + R++ YIGV+IDD+ K Sbjct: 361 GLFFAGQINGTSGYEEAACQGFMAGVNAARKLDGKEPVIIDRSEGYIGVLIDDIIHKKTP 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQ----EYNFLRSL 477 EPYR+ SR+EYR++LR DNA RL ++G + + + + I E LR + Sbjct: 421 EPYRVLPSRSEYRLTLRFDNAFMRLYEKAKEIGLLSKEKLEYLENAINIVNSEIERLREI 480 Query: 478 LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 +V ++ L S ++ K E L + + +L + + + + +++ Sbjct: 481 SVPMVKANELLEKLG-SNQKFAKGIKIGELLKVKEVTYDSLKDVT-EIGDYPEFIKNQIE 538 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 Y + R+ + ++ K E+ IPKDFD+S++ +SN + L ++P ++ +AS+ Sbjct: 539 TIIKYDIFIQRENEQIEKFKRLEEMRIPKDFDFSTVKGISNIARSGLEEIRPLSIGEASR 598 Query: 598 IEGMTPAALNLLLIYIK 614 I G+T + LL+ Y+K Sbjct: 599 ISGVTGNDIALLIGYLK 615 >gi|290987034|ref|XP_002676228.1| predicted protein [Naegleria gruberi] gi|284089829|gb|EFC43484.1| predicted protein [Naegleria gruberi] Length = 471 Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust. Identities = 227/477 (47%), Positives = 310/477 (64%), Gaps = 44/477 (9%) Query: 9 IVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGL 68 I++GGGH+GCEA A A T +ITH TIG +SCNP++GG+GKG LV+E+DAL GL Sbjct: 1 IIVGGGHSGCEAVNAALFHNADTLMITHSKDTIGVLSCNPSVGGVGKGILVKEVDALGGL 60 Query: 69 MGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQR---EILSQENLDVIQGEVA 125 MG+V+D A I + VLN+ KGPAV GPR Q DR +YR MQ+ E + L +I G V Sbjct: 61 MGKVSDYAMIHYNVLNLSKGPAVYGPRGQMDRYIYRNTMQKVFNEYTMKHKLKIIDGSVD 120 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIG-KLKIPAGRMG----DSPSN 180 T+ I +++++ I +VV+TTGTFLRG IHIG +++ P GR+ + Sbjct: 121 NLITKNGKIQGVILKNGQKIYAKSVVITTGTFLRGEIHIGTQVRFPGGRISEIGTERTCG 180 Query: 181 SLFNSFM-KFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT----- 234 SL ++F +F F+ GR+KTGTP RL +I WD +Q + + + PFSF D+ T Sbjct: 181 SLADTFYNEFKFEMGRMKTGTPPRLHRNSINWDILTEQPSTKFIEPFSFEHDENTFYGTR 240 Query: 235 ----NRQIECGITRTNLETHRIIMENIKHSA--IYSGDIKSYGPRYCPSIEDKIVRFGER 288 + C T TN +TH II N A + G+ GPRYCPSIE K+ RF +R Sbjct: 241 VPHSQPHMMCYETETNEKTHEIIRSNTDELADEVRFGN----GPRYCPSIEIKVTRFPQR 296 Query: 289 NGHQIFLEPEGLNT--------------DVVYPNGISTALPEEIQHQFIRTIPGLEKVNI 334 H+I+LEPEG T +V+YPNGIS++LP E Q +F++T+ GL++V + Sbjct: 297 TSHRIWLEPEGHITNKDEAKKLPYNHYANVIYPNGISSSLPPEKQLEFLKTMKGLDQVEM 356 Query: 335 IRPGYAIEYDYINPK-ELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINS---A 390 ++PGYA+ YD+++PK E+ TL+T K GLFLAGQINGTTGYEEAAAQG++AG+N+ A Sbjct: 357 LQPGYAVAYDFVSPKVEISHTLQTHKCQGLFLAGQINGTTGYEEAAAQGIIAGMNAAIYA 416 Query: 391 RKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLT 447 R N + R+++YIGV+IDDL ++GV EPYR+FTSR+EYR+ LR DNAD RLT Sbjct: 417 RGDN--EPFILDRSEAYIGVLIDDLVTRGVDEPYRVFTSRSEYRLMLRADNADLRLT 471 >gi|256027560|ref|ZP_05441394.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Fusobacterium sp. D11] gi|289765519|ref|ZP_06524897.1| glucose inhibited division protein A [Fusobacterium sp. D11] gi|289717074|gb|EFD81086.1| glucose inhibited division protein A [Fusobacterium sp. D11] Length = 625 Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust. Identities = 241/628 (38%), Positives = 364/628 (57%), Gaps = 18/628 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +++ YDVIV+G GHAG EAA + +LG AL+T TI MSCNP+IGG GK +LV E Sbjct: 1 MDKDYDVIVVGAGHAGVEAAFASTRLGNKVALMTLYLDTISMMSCNPSIGGPGKSNLVTE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 ID L G MGR D +Q + LN KGPA R R QAD+ YR M+ ++ EN+ +IQ Sbjct: 61 IDVLGGEMGRHIDEFNLQLKDLNTSKGPAARITRGQADKYKYRRKMREKLEKIENISLIQ 120 Query: 122 G-----------EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIP 170 + + EK +I I + + +VL TGTFL+G I IG + Sbjct: 121 DCAEEILVEDIKDSQNSSYEKKVIG-IKTRLGIIYNAKAIVLATGTFLKGKIVIGDVTYS 179 Query: 171 AGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT 230 AGR G++ + L +S + R +T TP RLD KTI + + E+ +E FS T Sbjct: 180 AGRQGETSAEKLSDSLRELGIKIERYQTATPPRLDKKTIDFFQLEELKGEEHPRYFSIFT 239 Query: 231 DKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNG 290 K N + +T T+ +T +I E +K S I SG + ++GPR+CPSI+ K++ F ++ Sbjct: 240 KKEKNNTVPTWLTYTSEKTIEVIKEMMKFSPIVSGMVNTHGPRHCPSIDRKVLNFPDKTK 299 Query: 291 HQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKE 350 HQIFLE E N+D +Y NG++TA+P +Q + ++TI GLE I+R GYA+EYDY + Sbjct: 300 HQIFLEMESENSDEIYVNGLTTAMPAFVQEKILKTIKGLENAKIMRHGYAVEYDYAPASQ 359 Query: 351 LFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGV 410 L+P+LE K+ISGLF AGQINGT+GYEEAAAQG +AG+N+A+K + R+++YIGV Sbjct: 360 LYPSLENKRISGLFFAGQINGTSGYEEAAAQGFIAGVNAAKKIKGEKPVIIDRSEAYIGV 419 Query: 411 MIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQ- 469 +IDDL K EPYR+ SRAEYR++LR DNA RL ++G + + + + K I Sbjct: 420 LIDDLIHKKTPEPYRVLPSRAEYRLTLRYDNAFMRLFDKIKEVGIVDKDKIEFLEKAIND 479 Query: 470 ---EYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDAR 526 E N L+++ S+ +K L S I ++ K A E L D S +L + + Sbjct: 480 VYMEINNLKNISVSMNEANKFLESLDIE-ERFVKGVKASEILKIKDVSYDDLKTFL-NLN 537 Query: 527 KFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSI 586 + V +++ Y + R+ + ++ K E IP++ +Y + +SN + L+ Sbjct: 538 DYEDFVKNQIETMIKYEVFIERENKQIEKFKKLEHMYIPENINYDEIKGISNIARAGLNE 597 Query: 587 LKPFNLLQASKIEGMTPAALNLLLIYIK 614 ++P ++ +A++I G+T + L++ ++K Sbjct: 598 VRPLSVGEATRISGVTSNDVTLIIAHMK 625 >gi|242222421|ref|XP_002476930.1| predicted protein [Postia placenta Mad-698-R] gi|220723757|gb|EED77870.1| predicted protein [Postia placenta Mad-698-R] Length = 565 Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust. Identities = 220/493 (44%), Positives = 297/493 (60%), Gaps = 55/493 (11%) Query: 33 LITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVR 92 L+T K IG +SCNP++GG+GKG L+RE+DALDGL GRVAD AGIQF++LN KG AV Sbjct: 103 LLTQKLDNIGELSCNPSMGGVGKGTLMREVDALDGLCGRVADQAGIQFQILNRSKGAAVW 162 Query: 93 GPRTQADRELYRLAMQREILSQENLDV---------------------IQGEVAGFNTEK 131 GPR Q DR LY+ MQ + + NLD+ G V G +K Sbjct: 163 GPRAQIDRTLYKQHMQAALHNYPNLDIRSASVSDLVFDHDVGSTSAHAQWGTVGGVRLDK 222 Query: 132 NIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDF 191 I + +I+CS VV+ TGTFL G IHIG + PAGR+ ++PS L S F Sbjct: 223 GI--NAFSDSGEVIKCSQVVICTGTFLSGEIHIGMKRFPAGRINEAPSVGLSGSLRSAGF 280 Query: 192 DTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN--RQIECGITRTNLET 249 GRL+TGTPARL +I + E+Q D PFSFM ++N QI C +T T T Sbjct: 281 QLGRLQTGTPARLYKDSIDFRNLEQQRGDSTPHPFSFMNSSVSNADNQILCYLTYTTPAT 340 Query: 250 HRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNG 309 H++I +N+ H +++ + K GPRYCPS+E K++RF +++ H ++LEPEG +++++YPNG Sbjct: 341 HQMIRDNL-HQSVHIQETKK-GPRYCPSLEAKVIRFPQKDQHLVWLEPEGYDSELIYPNG 398 Query: 310 ISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQI 369 +S ++PEE+Q RT+PGLE V + RP Y +EYDY++P+EL PTLETK+I GLFLAGQI Sbjct: 399 LSCSMPEEVQLMMYRTVPGLENVKLARPAYGVEYDYVDPRELKPTLETKRIKGLFLAGQI 458 Query: 370 NGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTS 429 NGTTGYEEAAAQG++AGIN+ + YRMFTS Sbjct: 459 NGTTGYEEAAAQGVLAGINAGMSALH----------------------------YRMFTS 490 Query: 430 RAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLS 489 R+EYR+++R DNAD RLT G I + R ++F +E + LLKS VL+ + Sbjct: 491 RSEYRMTIRSDNADLRLTEKARNAGAITDERWRQFEATREELTRVTDLLKSHVLSPQAWQ 550 Query: 490 STSISFKQDGKTR 502 + K DG R Sbjct: 551 NMGFDVKSDGHMR 563 >gi|262038132|ref|ZP_06011533.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Leptotrichia goodfellowii F0264] gi|261747856|gb|EEY35294.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Leptotrichia goodfellowii F0264] Length = 634 Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust. Identities = 240/628 (38%), Positives = 358/628 (57%), Gaps = 17/628 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +N++YDVIV+G GHAG EAA A++LG TAL T I MSCNP+IGG GK HLV E Sbjct: 1 MNKNYDVIVVGAGHAGVEAALAASRLGLKTALFTIYLDNIAMMSCNPSIGGPGKSHLVSE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 + L G M R D +Q + LN KG A R R QAD+ YR+ M+ + QENLD+IQ Sbjct: 61 LGMLGGEMARHIDNYNLQLKNLNHTKGLASRITRAQADKYRYRIKMREVLEKQENLDIIQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G V E I + + V+L TGTFL+G IG +K AGR G+ S+ Sbjct: 121 GIVTDLILENGEIRGVEDKLGVKYGAKAVILCTGTFLKGQFIIGDVKYSAGRQGEPSSDE 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L + ++ F+ R +T TP R+D +TI + KT++ +E+ FS+ T+K N + Sbjct: 181 LPDKLAEYGFELDRYQTATPPRIDKRTIDFSKTQELKGEEKPRYFSYETEKEYNPVLPTW 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T T +T E +K+S I +G + + GPR+CPS++ KI+ F E+ HQIFLE E + Sbjct: 241 LTFTTEKTIETGKEMLKYSPIVTGIVSTKGPRHCPSLDRKILNFPEKTDHQIFLEQESVE 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 ++ +Y NG +TA+P Q ++TI GLE I+R GYA+EY++I +L LETK I Sbjct: 301 SNEIYVNGFTTAMPPFAQEAMLKTIAGLENAKIVRYGYAVEYNFIPAYQLNLNLETKVIK 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GL+ AG INGT+GYEEAA QG +AG+N+ARK + I R++ YIGV+IDD+ +K Sbjct: 361 GLYTAGTINGTSGYEEAACQGFIAGVNAARKILGKEEIVIDRSEGYIGVLIDDIINKKTP 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ SRAEYR++LR DN RL ++G + + + + K + + LK++ Sbjct: 421 EPYRVLPSRAEYRLTLRQDNIFIRLFEKSKEIGLLRKEKLEELEKAKNQIDQETERLKTI 480 Query: 482 VL-----TSKNLSSTSISFKQDGKTR-----------TAYEFLSYPDFSIQNLFSICPDA 525 + T++ L F Q +A+EFL+ + + NL + Sbjct: 481 TVYPTKETNEKLKEIGKIFNQKNNNEEISVNSANSPVSAFEFLARKEITYDNLSKFI-ET 539 Query: 526 RKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 ++FS +V E+++I + Y + R+ + ++ K E+ IP++ DY + LSN L+ Sbjct: 540 KEFSPIVKEQIEINAKYNVFIEREKTQIEKFKKLEEMKIPENIDYEKIRGLSNIAMSGLT 599 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYI 613 KP + QAS+I G+T + +L+ I Sbjct: 600 YGKPHTVGQASRISGVTYNDIGILIANI 627 >gi|7109686|gb|AAF36757.1| glucose inhibited division protein A [Mycoplasma gallisepticum] gi|28212475|gb|AAO37614.1| glucose inhibited division protein A [Mycoplasma gallisepticum] Length = 611 Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust. Identities = 232/611 (37%), Positives = 350/611 (57%), Gaps = 6/611 (0%) Query: 9 IVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGL 68 IV+G GHAG EAA + +KL L + + CNP++GG KG + REIDAL G+ Sbjct: 5 IVVGAGHAGLEAAFILSKLNNKVYLCVLDRKYVANCPCNPSVGGPAKGIVTREIDALGGI 64 Query: 69 MGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFN 128 AD+ +Q ++LN KGP V+ R Q D+ Y+ +I + EN+++++GEV Sbjct: 65 QALAADSTALQRKILNSSKGPGVQCLRFQIDKVYYKKWFLEQIDNNENIELVEGEVTEVI 124 Query: 129 TEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMK 188 + + +++ + V++TTGT+L+ + GK G G SN+L F Sbjct: 125 KNGDTATGVMIDGVKKLEAGAVIITTGTYLKSLTFSGKDVKNEGPEGFKNSNNLSEWFKV 184 Query: 189 FDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNRQIECGITRTNL 247 F+ RLKTGTP R+ +I + + + + + FS + +K + ++ C + T Sbjct: 185 NGFELIRLKTGTPPRIKKDSIDYSNLQIEPGNGTELYFSHWSKNKYIDYELPCYLIHTTE 244 Query: 248 ETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYP 307 E H+II +N+ SA+YSG+I GPRYCPSIEDKIVRF + HQIFLEPE L VY Sbjct: 245 EIHKIINDNLHLSAMYSGNITGVGPRYCPSIEDKIVRFPNKPRHQIFLEPESLELGTVYL 304 Query: 308 NGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAG 367 G ST+L +Q + IR +PGL+K +I+ GYAIEYD INP +L+P+LE+K + LF AG Sbjct: 305 GGFSTSLDISVQDKIIRLLPGLKKAEVIKYGYAIEYDAINPIQLYPSLESKLVKNLFFAG 364 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 QINGT+GYEEAA QGL+AGIN+ +K + + SR ++YIGVMIDD+ +KGV +PYR+ Sbjct: 365 QINGTSGYEEAAGQGLIAGINANQKIKNKEPLILSRDEAYIGVMIDDIVTKGVTDPYRLL 424 Query: 428 TSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKN 487 TSRAEYR+ LR DN +RL G ++G I +++ + + +++ N L LK K Sbjct: 425 TSRAEYRLLLRNDNVLDRLIQKGYEIGTISKKQIDLYNQNLEKKNKLIEFLKD----KKV 480 Query: 488 LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICP-DARKFSSLVIERLQIESSYAAYT 546 T + + + YEFL P+ + L + D + +++ ++I Y Y Sbjct: 481 GMYTLLRAHTNNTNFSLYEFLKRPEIKLIELLKLIEFDYSNYDLELLKNIEITVKYEGYI 540 Query: 547 GRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAAL 606 ++ +K E IP+D Y + LS E +KL+ +KP NL QA +I G+ A + Sbjct: 541 KKESRLVNSLKNLESIKIPQDLIYDKVQNLSIEAIDKLNKIKPLNLAQAQRISGINLADI 600 Query: 607 NLLLIYIKKNT 617 L ++++N Sbjct: 601 ISLKTHLEQNA 611 >gi|46199909|ref|YP_005576.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Thermus thermophilus HB27] gi|81170586|sp|Q72H88|MNMG_THET2 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|46197536|gb|AAS81949.1| glucose inhibited division protein A [Thermus thermophilus HB27] Length = 597 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 231/588 (39%), Positives = 339/588 (57%), Gaps = 20/588 (3%) Query: 31 TALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPA 90 AL+T IG M CNPA+GG GK LV E+ AL GLMGR ADAA I RVLN KGPA Sbjct: 29 VALVTVNPDRIGMMPCNPAVGGPGKSQLVAEVVALGGLMGRAADAAAIHTRVLNRSKGPA 88 Query: 91 VRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTV 150 V+ R Q DR+LY L Q EIL++ ++V++GEVA E + + D + V Sbjct: 89 VQSLRVQVDRDLYALKAQ-EILAERPVEVLRGEVAALWVEGGRLLGVRTVDGRTLPAKAV 147 Query: 151 VLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTII 210 V+ GTFL GV+ G+ PAGR G+ P+ L S R KTGTP R+ ++ Sbjct: 148 VVAGGTFLSGVVWYGRKSRPAGRQGEPPARFLSQSLKAVGHTLRRFKTGTPPRIRADSVD 207 Query: 211 WDKTEKQFADERLIPFSFMTDKITNR-QIECGITRTNLETHRIIMENIKHSAIYSGDIKS 269 + + E + P SF + + ++ TRT THR+I+EN+ S +Y+GDI+ Sbjct: 208 FGRLE--VVPPEVPPGSFTGNPGPHAARLPTWQTRTTERTHRLILENLHLSPLYAGDIQG 265 Query: 270 YGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGL 329 GPRYCPSIEDK+VRF ++ H +F+EP+GL+T VY G S++LP E+Q + +R++PG Sbjct: 266 IGPRYCPSIEDKVVRFADKESHLLFVEPDGLSTTEVYLQGFSSSLPPELQEEMVRSLPGF 325 Query: 330 EKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINS 389 E+ I R YA+EYD ++P EL L+++ + GLF AGQ+NGT+GYEEAAAQGL+AG+N+ Sbjct: 326 ERAVIQRYAYAVEYDSLDPTELTRGLQSRFLPGLFSAGQVNGTSGYEEAAAQGLLAGLNA 385 Query: 390 ARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPI 449 AR + L + R YIGV++DDL +G EPYRM TSR E R+ R DNAD RLTP+ Sbjct: 386 ARFALGLPEVHLPRESGYIGVLVDDLVGRGTDEPYRMMTSRVELRLLCRADNADERLTPL 445 Query: 450 GMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLS 509 + G R ++ + +Y + + L+ L + L +S ++L Sbjct: 446 AVAWGL---RPREDLERVEAKYRRVAAELRRL----EALRVEGVS---------GLQWLR 489 Query: 510 YPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFD 569 P+ + + L P S ++++ + YA Y RQ ++++ E IP+ D Sbjct: 490 RPENTYRALAERFPPPEPLSPEEAYQVEVRAKYAGYIERQERLREKMRDLEAFRIPEGMD 549 Query: 570 YSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNT 617 + +P LS E EKLS +P +L +A++I G+ + L L +++++ Sbjct: 550 FPKVPGLSREAAEKLSRHRPKSLAEAARIPGVRDSDLTALAVHLRRGA 597 >gi|260654353|ref|ZP_05859843.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Jonquetella anthropi E3_33 E1] gi|260630986|gb|EEX49180.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Jonquetella anthropi E3_33 E1] Length = 597 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 231/594 (38%), Positives = 330/594 (55%), Gaps = 12/594 (2%) Query: 27 LGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVK 86 +GAS L+ S + M CNP+IGG KGHLVREI AL G R ADA+ I R LN Sbjct: 1 MGASVLLVAQDLSRVAFMPCNPSIGGPAKGHLVREISALGGEQARAADASAIMTRWLNTS 60 Query: 87 KGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIR 146 KG AVR R Q D Y + L+++Q EV G + + + + I Sbjct: 61 KGAAVRALRCQCDLNDYGRYYFARLTETPGLELLQDEVTGLIYDDWAVLGVRTRFGLEIP 120 Query: 147 CSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDG 206 V+LTTGT LRG+IH+G + P+G +G S L + K T RLKTGTP RL Sbjct: 121 AKRVILTTGTHLRGLIHVGLVNYPSGPVGQQASVRLADELAKMGLPTFRLKTGTPPRLHA 180 Query: 207 KTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGD 266 +I W E+Q ++ F F +++ C + RTN ETHRI+ +++ S I Sbjct: 181 DSIDWSVLERQEGEDTPECFDFWGTPAVHKEAFCAVLRTNKETHRIVTDHLDESPIVQRV 240 Query: 267 IKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTI 326 I GPRYCPSIE K++ F ++ H +FLEP +Y ST+LP +Q + ++ Sbjct: 241 ITGVGPRYCPSIESKVIAFPNKDSHPLFLEPVDRLGKEIYVQNFSTSLPASVQWPMVHSL 300 Query: 327 PGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAG 386 PG + I++PGYAIEYD +NP L P LE K++ GLF AGQINGT+GYEEAAAQGL+AG Sbjct: 301 PGCGRAKILKPGYAIEYDALNPLGLTPWLERKEVPGLFCAGQINGTSGYEEAAAQGLLAG 360 Query: 387 INSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRL 446 IN+ + + R ++Y+GV++DDL +KG EPYRM TSR EYR+ LR DNAD RL Sbjct: 361 INAVLSLRGEEPLVLGRHEAYLGVLVDDLVTKGTDEPYRMLTSRCEYRLLLRHDNADRRL 420 Query: 447 TPIGMKLGCIGERR----QKRFAKYIQEYNFLRSLLKSLVLTSKNLSS--TSISFKQDGK 500 G+ LG + + + + R+ + +E++ L SL LT++ + T+ + G+ Sbjct: 421 AAKGVALGLVSQSKWDELRHRWDREDREFDR----LGSLKLTAQQVDGVLTACQSRPTGQ 476 Query: 501 TRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEE 560 TA L P+ + Q L ++ A + + + + + Y Y RQ + A+ + E Sbjct: 477 GMTAAALLRRPEVTYQALAAV--GAGELTGDEADAVAVRVKYEGYVKRQELAAQSMLRLE 534 Query: 561 KRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIK 614 IP+DFD+ L +E EKL ++P L QAS+I G+TPA L L + ++ Sbjct: 535 GLEIPQDFDFKLLNGALSESVEKLERVRPRTLGQASRISGVTPADLQHLAMILR 588 >gi|28190317|gb|AAO33051.1| glucose-inhibited division protein [Buchnera aphidicola] Length = 532 Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust. Identities = 236/534 (44%), Positives = 318/534 (59%), Gaps = 9/534 (1%) Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G+M D +GIQFR+LN KGPAVR R QADR LY ++R + Q NL +++ Sbjct: 1 IDALGGIMAEAIDHSGIQFRILNSSKGPAVRSTRAQADRLLYHKNIKRLLQKQSNLLILE 60 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 EV + ++ Q+ + +VVL TGTFL IHIG GR+GD S Sbjct: 61 EEVKDLIFNNYTVKGVLTQNENNFFSKSVVLATGTFLGARIHIGLNSYSFGRIGDKSSID 120 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIEC 240 L N RLKTGTP R+D TI + Q +D + FSF+ D + +QI C Sbjct: 121 LSNRLRDLSLRVNRLKTGTPPRIDINTIDLNDLFVQNSDNPIPVFSFIGDVANHPKQIPC 180 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +T TN +TH II N+ S IY G +K GPRYCPSIEDK+VRF ++ HQIFLEPEGL Sbjct: 181 YLTHTNEKTHEIIRNNLDKSPIYQGVLKGLGPRYCPSIEDKVVRFPDKKSHQIFLEPEGL 240 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 ++ +YPNGIST+LP +IQ + + +I GLEK II PGYA+EYD+ +PK+L TLE+K I Sbjct: 241 SSLKIYPNGISTSLPLDIQKKLLTSIKGLEKSKIITPGYAVEYDFFDPKDLNLTLESKLI 300 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQINGTTGYEEAA+QGL+AG+N+ + + R +Y+GV+IDDLT+KG Sbjct: 301 KGLFFAGQINGTTGYEEAASQGLLAGLNAGLNAMERQHWFPRRDQAYLGVLIDDLTTKGT 360 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYI----QEYNFLRS 476 EPYRMFTSRAEYR+ LR DNAD RLT IG KLG + + R + + + E N L++ Sbjct: 361 EEPYRMFTSRAEYRLLLREDNADLRLTEIGRKLGLVNDLRWSHYNEKLSNIKSEINRLQT 420 Query: 477 LLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARK--FSSLVIE 534 L S + N S + + + E L P+ ++L + K F VIE Sbjct: 421 LKISPISPDSNFLSKYYRINLNHEI-SMIELLKRPEIKYKDL-QLLEKFNKGIFDFQVIE 478 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 +++ + Y Y RQ+ E E + D DY+++ LS+E+ +KL+ K Sbjct: 479 QIENQIKYEGYIKRQLEEINRQIKNEHTFLSADCDYNTIKGLSSEVVKKLNYHK 532 >gi|328947709|ref|YP_004365046.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Treponema succinifaciens DSM 2489] gi|328448033|gb|AEB13749.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Treponema succinifaciens DSM 2489] Length = 690 Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust. Identities = 211/436 (48%), Positives = 278/436 (63%), Gaps = 40/436 (9%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 S+DV V GGGHAG EA+ A++G T LIT +IG MSCNP+IGG+ KG++VREIDA Sbjct: 6 SFDVAVCGGGHAGIEASLACARMGLKTILITQSIDSIGRMSCNPSIGGIAKGNIVREIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENL------- 117 L G MGR+ D + IQFR+LN +GPAV+ PR+QAD+ +Y + + + ENL Sbjct: 66 LGGEMGRLIDRSMIQFRMLNKSRGPAVQAPRSQADKIVYSSLARHVVETTENLSTLMDTV 125 Query: 118 -DVI-----------------QGEVAG---------FNTE------KNIISSIVMQDNSM 144 DV+ G + G F T+ + I +V + + Sbjct: 126 VDVLTVASDVPLPKDSSGSLESGSIPGEKRSGSSYTFATQACRSGMRQKIIGVVTERGRI 185 Query: 145 IRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARL 204 I C VLTTGTFL G I IG+ P GR+G+S L S + F TGRLKTGTP R+ Sbjct: 186 IPCRAAVLTTGTFLGGRIFIGEYDAPCGRLGESGVFGLTESLSRLGFTTGRLKTGTPPRI 245 Query: 205 DGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYS 264 T+ + + E Q D+ ++PFSF +KI + C + TN ETH+II ENI S +YS Sbjct: 246 LKHTVDFSRFELQEGDKEILPFSFDDEKIERPMVPCHLVYTNEETHKIIRENINRSPLYS 305 Query: 265 GDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIR 324 G I GPRYCPSIEDK++RF ERN HQ+F+EPEGL TD +Y NG+S++LPEE+Q F+R Sbjct: 306 GKISGVGPRYCPSIEDKVMRFAERNRHQLFVEPEGLETDEIYLNGLSSSLPEEVQDAFLR 365 Query: 325 TIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLV 384 T+PG E + RPGYA+EYDY+ P +LFP+LETK+++GLF AGQINGT+GYEEAA QGLV Sbjct: 366 TMPGFENCVVSRPGYAVEYDYVEPTQLFPSLETKRVAGLFNAGQINGTSGYEEAAGQGLV 425 Query: 385 AGINSARKSNKLDCIC 400 AGIN+A + + +C Sbjct: 426 AGINAALYAREHKKLC 441 Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 76/230 (33%), Positives = 110/230 (47%), Gaps = 40/230 (17%) Query: 386 GINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNR 445 G +S K + + R ++YIGV+IDDL + G EPYRMFT+RAEYR+ LR D AD R Sbjct: 500 GFDSFEKIPSYEPLVLGRDEAYIGVLIDDLVTLGTKEPYRMFTARAEYRLKLRHDTADRR 559 Query: 446 LTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAY 505 L G +G I + +F + +Y K A Sbjct: 560 LRKKGFVVGLIS---KAQFEQMNLKYQ---------------------------KVDEAL 589 Query: 506 EFLS-YPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLI 564 EFLS +PD + F+SL Q + Y Y +Q ++ E I Sbjct: 590 EFLSKHPD---------AENPGNFNSLEWTLAQEDFKYRYYIEKQDSRVAKMHRMENARI 640 Query: 565 PKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIK 614 P DFDYS + ALS+E + KL ++P L QAS+I G+ + + LL++Y++ Sbjct: 641 PADFDYSKIVALSSESRAKLEKIRPLTLGQASRISGIRNSDIMLLMVYLR 690 >gi|222873270|gb|EEF10401.1| predicted protein [Populus trichocarpa] Length = 408 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 216/408 (52%), Positives = 271/408 (66%), Gaps = 2/408 (0%) Query: 44 MSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELY 103 MSCNP+IGG+GKGHLV+E+DA+ G M D AGIQFR+LN KGPAVR R QADR LY Sbjct: 1 MSCNPSIGGIGKGHLVKEVDAMGGAMAAATDEAGIQFRILNSSKGPAVRATRAQADRVLY 60 Query: 104 RLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIH 163 R A++ + +Q NL + Q V E + + Q R VVLT GTFL G IH Sbjct: 61 RKAIRTRLENQPNLMLFQQAVDDLMVEGDRVVGARTQVGIDFRARAVVLTAGTFLDGKIH 120 Query: 164 IGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERL 223 +G GR GD + SL + GRLKTGTP R+DG+TI + E+Q D Sbjct: 121 VGLDNYTGGRAGDPAAVSLSARLKELKLPQGRLKTGTPPRIDGRTIDFSVMEEQPGDLDP 180 Query: 224 IP-FSFMTDKITN-RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDK 281 +P FSF+ + +Q+ C IT TN TH +I + S +Y+G I+ GPRYCPSIEDK Sbjct: 181 VPVFSFLGRPEQHPQQLPCWITHTNSRTHDVIRGGLDRSPMYTGVIEGVGPRYCPSIEDK 240 Query: 282 IVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAI 341 I RF + HQIFLEPEGL T+ YPNGIST+LP ++Q + + +I GLE +I+RPGYAI Sbjct: 241 IHRFASKESHQIFLEPEGLTTNEFYPNGISTSLPFDVQLELVHSIRGLENAHILRPGYAI 300 Query: 342 EYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICF 401 EYDY +P+ L +LE+K I GLF AGQINGTTGYEEAAAQGL+AGIN+ + D Sbjct: 301 EYDYFDPRGLKSSLESKAIEGLFFAGQINGTTGYEEAAAQGLLAGINAGCYVRERDAWTP 360 Query: 402 SRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPI 449 R +Y+GV++DDL ++GV EPYRMFTSRAE+R+SLR DNAD RLT I Sbjct: 361 RRDQAYLGVLVDDLITRGVTEPYRMFTSRAEFRLSLREDNADMRLTEI 408 >gi|257124823|ref|YP_003162937.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Leptotrichia buccalis C-1013-b] gi|257048762|gb|ACV37946.1| glucose inhibited division protein A [Leptotrichia buccalis C-1013-b] Length = 630 Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust. Identities = 247/631 (39%), Positives = 355/631 (56%), Gaps = 23/631 (3%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YD+IV+G GHAG EAA AA+ G TAL T I MSCNP++GG GK HLV E+ Sbjct: 2 KNYDIIVVGAGHAGVEAALAAARHGLKTALFTIYLDNIAMMSCNPSVGGPGKSHLVSELG 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 L G M R D +Q + LN KG A R R QAD+ YR+ M+ I QENLD++QG Sbjct: 62 MLGGEMARHIDNYNLQLKNLNHTKGLASRITRAQADKYWYRIKMREIIEKQENLDLVQGI 121 Query: 124 VAGFNTEKNIISSIVMQDNSMIR--CSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E + + +DN I+ VVL TGTFL G +G +K +GR G+ S Sbjct: 122 VVDLIVENKKVMGV--EDNLGIKYGAKAVVLCTGTFLDGEYVMGDVKYSSGRQGEPASVD 179 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L + +++ F+ R +T TP R+D +I + KTE+ +++ FS+ T K N + Sbjct: 180 LPDRLVEYGFELDRYQTATPPRIDKSSIDFSKTEELKGEDKPRYFSYETKKEYNSTLPTW 239 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T T ET R+ E +K+S I +G + + GPR+CPS++ KI+ F E+ HQIFLE E + Sbjct: 240 LTFTTPETIRVGQEMLKYSPIVTGIVSTKGPRHCPSLDRKIMNFPEKTNHQIFLEQESVE 299 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 +D +Y NG +TA+P Q ++TI GLE I+R GYA+EY+++ +L TLETK + Sbjct: 300 SDEIYINGFTTAMPPFAQEAMLKTISGLENAKIVRYGYAVEYNFVPAYQLKLTLETKVLD 359 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GL+ AG INGT+GYEEAA QG +AG+N+ARK I R++ YIGV+IDD+ +K Sbjct: 360 GLYTAGTINGTSGYEEAACQGFMAGVNAARKILGKKEIVIDRSEGYIGVLIDDIINKKTP 419 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS- 480 EPYR+ SRAEYR++LR DN RL ++G + + QE LKS Sbjct: 420 EPYRVLPSRAEYRLTLRQDNIFIRLLEKAKEIGLLNAEKLTELENTCQEIENEIERLKSI 479 Query: 481 ------------LVLTSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICP 523 L + K S S ++ K +A+EFL+ + + NL Sbjct: 480 TVYPTKENNEKLLEIVEKQNQSESAEIEKTSKNSMNSPVSAFEFLARKEINYNNLSEFVK 539 Query: 524 DARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEK 583 K S L E+++I + Y + R+ + ++ K EK +IPKDFDY S+ LSN Sbjct: 540 TV-KLSDLAKEQVEINAKYNVFIEREKAQIEKFKKLEKMIIPKDFDYESVKGLSNIAISG 598 Query: 584 LSILKPFNLLQASKIEGMTPAALNLLLIYIK 614 L +P + QAS+I G+T ++LL+ +K Sbjct: 599 LIYGQPETIGQASRISGVTYNDISLLIAILK 629 >gi|325284180|ref|YP_004256721.1| glucose inhibited division protein A [Deinococcus proteolyticus MRP] gi|324315989|gb|ADY27104.1| glucose inhibited division protein A [Deinococcus proteolyticus MRP] Length = 606 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 248/623 (39%), Positives = 354/623 (56%), Gaps = 36/623 (5%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M NR ++VIVIGGGHAG EAA AAK G + A++ +TIG M CNP++GG GK LV Sbjct: 1 MKNR-WNVIVIGGGHAGIEAAWAAAKFGRA-AMLVGNPATIGRMPCNPSVGGPGKSQLVF 58 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+ AL GLM +AD I RVLN KGPAV+ R Q +R+LY Q +LS LD++ Sbjct: 59 ELQALGGLMPTLADQTAIHTRVLNASKGPAVQSLRVQNERDLYATVAQDALLSVPELDIL 118 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 +GE A ++ +V D +VV+ GTF+RGV G+ GR G+ PS Sbjct: 119 RGEAADLESDGQGGWWVVTTDGRRFWGRSVVVAAGTFMRGVTWYGRQSRHEGRQGEPPSR 178 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN----- 235 L + + R KTGTP R+ ++ +F D +IP T Sbjct: 179 YLSAALEQGGHTLKRFKTGTPPRVRADSV-------RFGDLTVIPADQPARSFTGTPGPH 231 Query: 236 -RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 T T THR++ ENI HSA+Y+GDI + G RYCPSIEDKI+RF + H +F Sbjct: 232 AEASPTWQTHTTPLTHRLVAENIGHSAMYAGDIDALGARYCPSIEDKIMRFAHHDRHLLF 291 Query: 295 LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT 354 +EPEGL T VY G S++LP E+Q +RT+PG E+ I R YA+EYD ++ EL Sbjct: 292 VEPEGLETSEVYLQGFSSSLPPELQDVLVRTLPGFEQAVIQRYAYAVEYDVVDSTELTMN 351 Query: 355 LETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDD 414 LE++++ G++ AGQ+NGT+GYEEAA QGLVAG +AR++ L FSR D Y+GV++DD Sbjct: 352 LESRRLPGVYTAGQLNGTSGYEEAAMQGLVAGTAAARRAAGLSEETFSRADGYLGVLLDD 411 Query: 415 LTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFL 474 L KG EP+RM TSR E+R+ +R DNAD RLTP+ +LG +G Q + +Y + Sbjct: 412 LMLKGCDEPFRMMTSRVEHRLLVRQDNADERLTPLAQRLGLVG---QVQLDAVQAKYRRV 468 Query: 475 RSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIE 534 + +++L + DGK + L P+ S+ +L + + S E Sbjct: 469 EAGMQALARQ-----------RLDGKPAEVH--LRRPEVSLVDLEAQGVQLPELSREEKE 515 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEK--RLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 ++I YA Y R +++ E K RL D++++P+LS E +EKL P + Sbjct: 516 AVEIRVKYAGYLDRAR---RQLDAEAKAGRLSLSGVDFAAVPSLSLEGREKLLRHAPTTV 572 Query: 593 LQASKIEGMTPAALNLLLIYIKK 615 QAS+I+G+ A ++ LL+++K+ Sbjct: 573 EQASRIQGVRHADISALLVHLKQ 595 >gi|84996187|ref|XP_952815.1| glucose-inhibited division protein a-like protein [Theileria annulata strain Ankara] gi|65303813|emb|CAI76190.1| glucose-inhibited division protein a-like protein, putative [Theileria annulata] Length = 745 Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust. Identities = 223/491 (45%), Positives = 305/491 (62%), Gaps = 33/491 (6%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DV+V+GGGH+G EAA AA++GA+T LIT S+IG +SCNP+IGG+GKG+LV EIDAL Sbjct: 33 FDVLVVGGGHSGIEAATAAARVGANTLLITPDLSSIGELSCNPSIGGIGKGNLVCEIDAL 92 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DG+MG AD + I FR LN KGPAV GPR Q DR+LY++ +++ + + NL +Q V Sbjct: 93 DGIMGMCADLSAISFRCLNTSKGPAVVGPRVQIDRDLYKINIRKLLENYNNLSFLQALVD 152 Query: 126 GF-----NTEKN----------------IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHI 164 NT +N + I ++D +I TV+LTTGTFL+G HI Sbjct: 153 ELILDYSNTSENNNSLEINNIVDVKDQVSVKGIKLKDGQIINSKTVILTTGTFLKGRCHI 212 Query: 165 GKLKIPAGRMG------DSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQF 218 K GR+ + S++L N F K T R KTGTPARLD K+I +++ E Q Sbjct: 213 SKETHKGGRINRISGKFEPSSDNLSNVFSKLGIKTLRFKTGTPARLDRKSINYEELEVQK 272 Query: 219 ADERLIPFSFMTD--KITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCP 276 +DE FS++ + K+ N I C T+TN H I+ N+ + Y+ + GPRYCP Sbjct: 273 SDENPKFFSYLNEDFKVENELINCYKTQTNEVVHNIVRNNLHNLPDYTSGL---GPRYCP 329 Query: 277 SIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIR 336 SI K+ + H ++LEPEG+N+D++YPNG+S + E Q + ++ I GLE V ++ Sbjct: 330 SISTKVTKHPSIKSHIVWLEPEGINSDIIYPNGLSGSFDIEAQLEILKNIKGLENVKVLT 389 Query: 337 PGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKL 396 P Y +EYD I+P L TLE KKI +FLAGQI GTTGYEEA + G++AGINS+ KS + Sbjct: 390 PAYDVEYDLIDPTNLKYTLELKKIKNMFLAGQICGTTGYEEAGSLGIIAGINSSLKSLNV 449 Query: 397 D-CICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGC 455 D +R + YIGV+IDDL KG+ EPYRMFTSR+EYR+ R DN D R+ G+K G Sbjct: 450 DEEFIINRNEGYIGVLIDDLIRKGISEPYRMFTSRSEYRLQNRIDNGDVRMLIKGIKYGV 509 Query: 456 IGERRQKRFAK 466 I R++ K Sbjct: 510 IKNRKRLELMK 520 >gi|320451555|ref|YP_004203651.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Thermus scotoductus SA-01] gi|320151724|gb|ADW23102.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Thermus scotoductus SA-01] Length = 597 Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust. Identities = 228/585 (38%), Positives = 332/585 (56%), Gaps = 20/585 (3%) Query: 31 TALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPA 90 AL+T IG M CNPA+GG GK LV E+ AL GLMGR ADA I RVLN KGPA Sbjct: 28 VALVTINPERIGMMPCNPAVGGPGKSQLVAELTALGGLMGRAADATAIHTRVLNRSKGPA 87 Query: 91 VRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTV 150 V+ R Q DR+LY L Q EIL++ ++VI+GEV E + + D I V Sbjct: 88 VQSLRVQVDRDLYALKAQ-EILAERPVEVIRGEVVSLFVEGGRLLGVRTVDGREIPAKAV 146 Query: 151 VLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTII 210 V+ GTFL GV+ G+ PAGR G+ P+ L S R KTGTP R+ ++ Sbjct: 147 VVAGGTFLGGVVWYGRRSRPAGRQGEPPARFLSRSLEAVGHTLRRFKTGTPPRIRADSV- 205 Query: 211 WDKTEKQFADERLIPFSFMTDKITNR-QIECGITRTNLETHRIIMENIKHSAIYSGDIKS 269 D +E + P SF + ++ TRT THR+I+EN+ S +Y+GDI Sbjct: 206 -DFSELLVVPPEVPPGSFTGSPGPHAAKLPTWQTRTTSRTHRLILENLHLSPLYAGDIVG 264 Query: 270 YGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGL 329 GPRYCPSIEDK+VRF +++ H +F+EP+GL T VY G S++LP E+Q ++++PG Sbjct: 265 IGPRYCPSIEDKVVRFSDKDSHLLFVEPDGLATSEVYLQGFSSSLPPELQEDMVKSLPGF 324 Query: 330 EKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINS 389 + I R YA+EYD ++P EL L+++ + GLF AGQ+NGT+GYEEAAAQGL+AG+N+ Sbjct: 325 GRAVIQRYAYAVEYDSLDPTELTRGLQSRFLPGLFAAGQVNGTSGYEEAAAQGLLAGLNA 384 Query: 390 ARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPI 449 AR + L + R YIGVM+DDL +G EPYRM TSR E R+ R DNAD RL P+ Sbjct: 385 ARYALGLSEVHLPRESGYIGVMVDDLVGRGTDEPYRMMTSRVELRLLCRADNADERLVPL 444 Query: 450 GMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLS 509 ++ G R ++ ++Y + + L+ L + + DG + +L Sbjct: 445 AVEWGL---RPREDLEAMREKYRRVEAELRRLE-----------ALRVDGV--SGLVWLR 488 Query: 510 YPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFD 569 P+ + L P S ++++ + YA Y RQ ++++ E IP+ + Sbjct: 489 RPENTYGALAERFPPPVPLSPEEAYQVEVRAKYAGYIERQEQLREKLRDLEGFRIPEGLE 548 Query: 570 YSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIK 614 + +P LS E EKLS ++P + +A+++ G+ + L LL++++ Sbjct: 549 FPRIPGLSREAVEKLSRVRPRTVAEAARVPGIRDSDLTALLVHLR 593 >gi|205831542|sp|Q1IVV5|MNMG_DEIGD RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A Length = 602 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 248/621 (39%), Positives = 352/621 (56%), Gaps = 35/621 (5%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R ++V+VIGGGHAG EAA AAK A A++ +T+G M CNPA+GG GK LV E+ Sbjct: 2 RGWNVMVIGGGHAGLEAAWAAAKF-ARVAVLVSNPATVGRMPCNPAVGGPGKSQLVFEVQ 60 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL GLMGR+AD I RVLN KGPAV+ R Q +R+ Y Q +L +DV++GE Sbjct: 61 ALGGLMGRLADDTAIHTRVLNASKGPAVQSLRVQNERDAYAERAQEILLGHSGIDVVRGE 120 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 A + +V D +VV+ GTF+RGV G+ P GR G+ PS L Sbjct: 121 AADLEPDGCGGWFVVTTDGRRFHARSVVVAAGTFMRGVTWYGRYSRPEGRQGEPPSRFLS 180 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR------Q 237 + R KTGTP R+ ++ +FAD IP T R + Sbjct: 181 APLARAGHRLKRYKTGTPPRVRADSV-------RFADLLEIPADPQPRGFTGRPGPRAAE 233 Query: 238 IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 T T ETHR+I EN+ S +Y+GDI GPRYCPSIEDK+VRF + H +F+EP Sbjct: 234 SPTWQTHTTPETHRLIQENLHESPMYAGDIAGLGPRYCPSIEDKVVRFAHHDRHLLFVEP 293 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 +G+ T VY G S++LP +Q + +R++PG E I R YA+EYD ++ EL LE+ Sbjct: 294 DGVQTSEVYLQGFSSSLPPALQDRLVRSLPGFEAAVIQRYAYAVEYDVVDSTELTLNLES 353 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 + + G+F AGQINGT+GYEEAAAQGLVAG +AR++ +L+ + SR SY+GV++DDL Sbjct: 354 RLLPGIFTAGQINGTSGYEEAAAQGLVAGTAAARRALELEELQISRETSYLGVLLDDLVL 413 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF-AKYIQEYNFLRS 476 KG EPYRM TSR E+R+ +R DNAD RLT +G+KLG + E Q+ AKY + +R+ Sbjct: 414 KGSDEPYRMMTSRVEHRLIVRQDNADERLTELGVKLGLVDEDTQRAVQAKYRRVAEGIRA 473 Query: 477 LLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 L V G+T A+ L P+F+++++ ++ S E + Sbjct: 474 LQMQRV---------------QGQTGDAW--LRRPEFALEDVEALGFKLPALSPEEREAV 516 Query: 537 QIESSYAAYTGRQMIE-AKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 I YA Y R + A E + E L + + + +LSNE +EKL ++P + QA Sbjct: 517 AIRVKYAGYIERAERQLAAEDRARELSL--RGVAFGEIASLSNEAREKLERVRPLTVAQA 574 Query: 596 SKIEGMTPAALNLLLIYIKKN 616 + I G+ A ++ LL+++++ Sbjct: 575 AGIPGVRHADISALLVHLRRT 595 >gi|94986434|ref|YP_605798.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Deinococcus geothermalis DSM 11300] gi|94556715|gb|ABF46629.1| Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme, GidA [Deinococcus geothermalis DSM 11300] Length = 614 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 248/621 (39%), Positives = 352/621 (56%), Gaps = 35/621 (5%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R ++V+VIGGGHAG EAA AAK A A++ +T+G M CNPA+GG GK LV E+ Sbjct: 14 RGWNVMVIGGGHAGLEAAWAAAKF-ARVAVLVSNPATVGRMPCNPAVGGPGKSQLVFEVQ 72 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL GLMGR+AD I RVLN KGPAV+ R Q +R+ Y Q +L +DV++GE Sbjct: 73 ALGGLMGRLADDTAIHTRVLNASKGPAVQSLRVQNERDAYAERAQEILLGHSGIDVVRGE 132 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 A + +V D +VV+ GTF+RGV G+ P GR G+ PS L Sbjct: 133 AADLEPDGCGGWFVVTTDGRRFHARSVVVAAGTFMRGVTWYGRYSRPEGRQGEPPSRFLS 192 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR------Q 237 + R KTGTP R+ ++ +FAD IP T R + Sbjct: 193 APLARAGHRLKRYKTGTPPRVRADSV-------RFADLLEIPADPQPRGFTGRPGPRAAE 245 Query: 238 IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 T T ETHR+I EN+ S +Y+GDI GPRYCPSIEDK+VRF + H +F+EP Sbjct: 246 SPTWQTHTTPETHRLIQENLHESPMYAGDIAGLGPRYCPSIEDKVVRFAHHDRHLLFVEP 305 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 +G+ T VY G S++LP +Q + +R++PG E I R YA+EYD ++ EL LE+ Sbjct: 306 DGVQTSEVYLQGFSSSLPPALQDRLVRSLPGFEAAVIQRYAYAVEYDVVDSTELTLNLES 365 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 + + G+F AGQINGT+GYEEAAAQGLVAG +AR++ +L+ + SR SY+GV++DDL Sbjct: 366 RLLPGIFTAGQINGTSGYEEAAAQGLVAGTAAARRALELEELQISRETSYLGVLLDDLVL 425 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF-AKYIQEYNFLRS 476 KG EPYRM TSR E+R+ +R DNAD RLT +G+KLG + E Q+ AKY + +R+ Sbjct: 426 KGSDEPYRMMTSRVEHRLIVRQDNADERLTELGVKLGLVDEDTQRAVQAKYRRVAEGIRA 485 Query: 477 LLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 L V G+T A+ L P+F+++++ ++ S E + Sbjct: 486 LQMQRV---------------QGQTGDAW--LRRPEFALEDVEALGFKLPALSPEEREAV 528 Query: 537 QIESSYAAYTGRQMIE-AKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 I YA Y R + A E + E L + + + +LSNE +EKL ++P + QA Sbjct: 529 AIRVKYAGYIERAERQLAAEDRARELSL--RGVAFGEIASLSNEAREKLERVRPLTVAQA 586 Query: 596 SKIEGMTPAALNLLLIYIKKN 616 + I G+ A ++ LL+++++ Sbjct: 587 AGIPGVRHADISALLVHLRRT 607 >gi|13508296|ref|NP_110246.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Mycoplasma pneumoniae M129] gi|2494735|sp|P75221|MNMG_MYCPN RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|1673956|gb|AAB95933.1| NADH-binding oxidoreductase GidA [Mycoplasma pneumoniae M129] gi|301633329|gb|ADK86883.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Mycoplasma pneumoniae FH] Length = 612 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 221/600 (36%), Positives = 340/600 (56%), Gaps = 8/600 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 S+ + VIGGGHAG EAA +A+KLG L+ + +GS CNPAIGG KG + REID Sbjct: 2 SFTLTVIGGGHAGLEAAFIASKLGLKVNLLVLDPNHVGSCPCNPAIGGPAKGIVTREIDV 61 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G+ G+ ADA +Q+++LN KGPAV+ R Q D+ Y+ +++I N+++I GE Sbjct: 62 LGGMQGKAADATALQYKLLNSSKGPAVQAIRAQIDKIAYQKWFRQQIDQTPNIELIAGEA 121 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + +V+ D S + V++TTGT+L+ + G L G S L Sbjct: 122 VDILESNGKVKGVVLADGSELASDAVIVTTGTYLKAKTYCGSLSKEEGPDRAKRSEYLST 181 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--NRQIECGI 242 + +K F T RLKTGTP R+ +++ + + + + FSF T +Q+ C + Sbjct: 182 NLIKRGFKTLRLKTGTPPRILRESLDFSQMAVEANTTPHLAFSFTTKNYLPLEQQVICHL 241 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 TN + H++I+ N+K SA+++G IK+ GP YCPSIEDK+ RF ++ HQIF+EPE L+ Sbjct: 242 IHTNPQIHQLILANLKQSAVFNGSIKANGPLYCPSIEDKVFRFQDKERHQIFVEPESLSL 301 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G ST+ P E+Q +R +PG + + GYAIEYD + +L TLETK I Sbjct: 302 ETVYLAGFSTSFPPEVQEHIVRLLPGFKNARFQKYGYAIEYDAFSSIQLKSTLETKLIQN 361 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQINGT+GYEEAA QGL+AGIN+A K + R ++Y+GVMI+DL +K + + Sbjct: 362 LYFAGQINGTSGYEEAAGQGLIAGINAALKLQRKPEFVLQRNEAYLGVMINDLVTKEISD 421 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYR+ TSRAE+R+ LR DN RL LG + +A Y+++ + L+ L Sbjct: 422 PYRLLTSRAEHRLWLRNDNLQERLIEKSRALGLV---EADVYANYLEQQQKKKQLIDYLQ 478 Query: 483 LTS-KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 T+ +++ ++FK +T ++F + + +L + P + ++ I+ Sbjct: 479 TTTVGQIAALKLNFKNTA--QTLFDFTKRAEIKLVDLVQLLPKRFDLDVQSLNQIDIDIK 536 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y + K + IP +Y +P L++E KLS ++P +L AS++ G+ Sbjct: 537 YAGYIKKSEKYFKSLNNLSSVKIPLKLNYHKVPNLASEAIVKLSKIRPTDLSVASQVAGI 596 >gi|213579759|ref|ZP_03361585.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 473 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 209/465 (44%), Positives = 293/465 (63%), Gaps = 5/465 (1%) Query: 157 FLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEK 216 FL G IHIG GR GD PS L + RLKTGTP R+D +TI + + Sbjct: 2 FLDGKIHIGLDNYSGGRAGDPPSIPLSRRLRELPLRVSRLKTGTPPRIDARTIDFSVLAQ 61 Query: 217 QFADERLIPFSFMTDKITN-RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYC 275 Q D + FSFM + + +Q+ C IT TN +TH +I N+ S +Y+G I+ GPRYC Sbjct: 62 QHGDNPMPVFSFMGNAFQHPQQVPCYITHTNEKTHDVIRNNLDRSPMYAGVIEGIGPRYC 121 Query: 276 PSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNII 335 PSIEDK++RF +RN HQIFLEPEGL ++ +YPNGIST+LP ++Q Q +R++ G+E I+ Sbjct: 122 PSIEDKVMRFADRNQHQIFLEPEGLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENAKIV 181 Query: 336 RPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNK 395 RPGYAIEYD+ +P++L PTLE+K I GLF AGQINGTTGYEEAAAQGL+AG+N+AR S Sbjct: 182 RPGYAIEYDFFDPRDLKPTLESKFIHGLFFAGQINGTTGYEEAAAQGLLAGLNAARLSAD 241 Query: 396 LDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGC 455 + +R+ +Y+GV++DDL + G EPYRMFTSRAEYR+ LR DNAD RLT +G +LG Sbjct: 242 KEGWAPARSQAYLGVLVDDLCTLGTKEPYRMFTSRAEYRLMLREDNADLRLTEMGRELGL 301 Query: 456 IGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQD---GKTRTAYEFLSYPD 512 + + R RF + ++ R LKS +T S+ ++ + + + L P+ Sbjct: 302 VDDERWARFNEKLENIERERQRLKSTWVTPSAESADEVNAHLTTPLSREASGEDLLRRPE 361 Query: 513 FSIQNLFSICPDARKF-SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYS 571 + L S+ A E+++I+ Y Y RQ E ++ E L+P DY Sbjct: 362 MTYAQLTSLAAFAPALEDEQAAEQVEIQVKYEGYIARQQDEIEKQLRNENTLLPATLDYR 421 Query: 572 SLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKN 616 + LSNE+ KL+ KP ++ QAS+I G+TPAA+++LL+++KK Sbjct: 422 QVSGLSNEVIAKLNDHKPASIGQASRISGVTPAAISILLVWLKKQ 466 >gi|313681129|ref|YP_004058868.1| glucose inhibited division protein a [Oceanithermus profundus DSM 14977] gi|313153844|gb|ADR37695.1| glucose inhibited division protein A [Oceanithermus profundus DSM 14977] Length = 607 Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust. Identities = 230/585 (39%), Positives = 331/585 (56%), Gaps = 18/585 (3%) Query: 33 LITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVR 92 L+T + IG M CNPA+GG GK LV EI+AL G MGR+ADAA I RVLN KGPAVR Sbjct: 35 LVTGDPARIGLMPCNPAVGGPGKSQLVHEIEALGGWMGRLADAAAIHTRVLNRSKGPAVR 94 Query: 93 GPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVL 152 R Q DR+ Y A + + ++ N+ V++GE G E ++ + D ++ VL Sbjct: 95 SLRVQTDRDAYAAAARAALAAEANVAVVRGEAVGLVREGGRLAGVRTADGRVLAAPAAVL 154 Query: 153 TTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWD 212 GTFLRG I G PAGR G+ P+ L + T RLKTGTP R+ ++I + Sbjct: 155 AAGTFLRGRIWYGLQSRPAGRQGEPPARHLSAALEALGHRTLRLKTGTPPRILRRSIDFA 214 Query: 213 KTEKQFADERLIPFSFMTDKITNRQ-IECGITRTNLETHRIIMENIKHSAIYSGDIKSYG 271 E+ D+ P SF + + TRT+ THR+I++++ S +Y+G +++ G Sbjct: 215 ALEEVPPDD--PPGSFSGRPGPHAAALPTWTTRTHPGTHRLILDHLDASPLYAGAVQAVG 272 Query: 272 PRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEK 331 PRYCPSIEDK+VRF +++ H +F+EP+GL T VY G S++LP +Q + +RT+PG E+ Sbjct: 273 PRYCPSIEDKVVRFADKDSHLLFVEPDGLETSEVYLQGFSSSLPPAVQERMVRTLPGFER 332 Query: 332 VNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSAR 391 I R YA+EYD +P +L P L ++ + GLFLAGQ+NGT+GYEEAAAQGLVAG+N+AR Sbjct: 333 AVIQRYAYAVEYDAFDPTDLSPGLMSRHLPGLFLAGQVNGTSGYEEAAAQGLVAGLNAAR 392 Query: 392 KSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGM 451 + D + ++YIGV+IDDL ++GV EPYRM TSR R+ LR DNAD RL P Sbjct: 393 FAAGEDAVVLGPDEAYIGVLIDDLVTRGVDEPYRMMTSRVALRLLLRGDNADERLVP--- 449 Query: 452 KLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYP 511 K G R + +Y +R+ L+ L + S+ ++ G T Sbjct: 450 KAAAWGLRPAADAERVTAKYARVRAELERLGRARIEGAPASVWLRRPGATLA-------- 501 Query: 512 DFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYS 571 + P S E+++I + YA Y RQ + IP + DY Sbjct: 502 ----EAWHRAGPPPAPLSREEAEQVEIRAKYAGYIERQERQRSRTGELAAYPIPPELDYR 557 Query: 572 SLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKN 616 ++ LS E EKLS +P NL +A++I G+ + + LL+++ + Sbjct: 558 TVHNLSREAIEKLSRRRPANLAEAARIPGLRDSEITALLVHLARR 602 >gi|121591763|ref|ZP_01678970.1| glucose-inhibited division protein A [Vibrio cholerae 2740-80] gi|121546375|gb|EAX56630.1| glucose-inhibited division protein A [Vibrio cholerae 2740-80] Length = 498 Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust. Identities = 219/498 (43%), Positives = 293/498 (58%), Gaps = 15/498 (3%) Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 + GLM + D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Q V Sbjct: 1 MGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRNVLENTPNLTLFQQAV 60 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + I +V Q VVLT GTFL G IHIG GR GD PS +L + Sbjct: 61 DDVIVEHDHIRGVVTQMGLKFHAKAVVLTVGTFLGGKIHIGLENYAGGRAGDPPSIALAH 120 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 + F RLKTGTP R+D ++ + E Q D FSFM + + RQI C IT Sbjct: 121 RLRELPFRVDRLKTGTPPRIDANSVDFSVLEAQHGDNPTPVFSFMGKREHHPRQIPCYIT 180 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +++ HQIF+EPEGL T Sbjct: 181 HTNERTHDVIRANLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADKDSHQIFIEPEGLTTT 240 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK I GL Sbjct: 241 ELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKYIHGL 300 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G EP Sbjct: 301 FFAGQINGTTGYEEAAAQGLMAGLNASLYSQDKEGWSPRRDQAYMGVLIDDLSTMGTKEP 360 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT +LG + + R RF + I R L+ + Sbjct: 361 YRMFTSRAEYRLLLREDNADLRLTEKARELGLVDDARWARFNQKIDNMAKERQRLQETWM 420 Query: 484 TSKN--------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VIE 534 + L T +S + G+ + L P+ + + L ++ A E Sbjct: 421 NPNSVGVEQLNTLLKTPMSREASGE-----DLLRRPEMTYELLTTLPAFAPALEDAEAAE 475 Query: 535 RLQIESSYAAYTGRQMIE 552 +++I+ Y Y RQ E Sbjct: 476 QVEIQVKYDGYIQRQQDE 493 >gi|297625197|ref|YP_003706631.1| glucose inhibited division protein A [Truepera radiovictrix DSM 17093] gi|297166377|gb|ADI16088.1| glucose inhibited division protein A [Truepera radiovictrix DSM 17093] Length = 606 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 241/615 (39%), Positives = 339/615 (55%), Gaps = 25/615 (4%) Query: 9 IVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGL 68 +V+GGGHAG EAA AA+LGA AL IG M CNPAIGG GK LV E+ AL G+ Sbjct: 1 MVVGGGHAGIEAAHAAARLGARVALTLPNPDKIGLMPCNPAIGGPGKSQLVFEVHALGGV 60 Query: 69 MGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGF- 127 MGR+ADA I R LN KGPAV+ R Q +R+ Y A + + + +++++GE+A Sbjct: 61 MGRLADATAIHARTLNASKGPAVQSLRVQNERDDYAAAARALVEATPGIEIVRGEIAELL 120 Query: 128 ---NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + + + D ++R +VVL TGTFL GV+ GK + PAGR G++P+ L Sbjct: 121 VTATGNAPQLRGVRLTDGRVLRAPSVVLCTGTFLAGVVWYGKQQRPAGRQGEAPARHLSR 180 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S R KTGTP R+ ++ + E AD+ FS +T Sbjct: 181 SLRATGHALLRFKTGTPPRIRADSVDFGVLEVVPADDPPGSFSGSPGPRATSS-PTWLTH 239 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETH +I N+ HSA+Y G+I+ GPRYCPSIEDK+VRF ++ H +F+EP+G T Sbjct: 240 TTPETHALIQANLAHSAMYGGEIEGRGPRYCPSIEDKVVRFADKERHLLFVEPDGAGTSE 299 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G S+++P +Q + IRT+PG E+ I R YA+EYD ++P +L TL +K++ GLF Sbjct: 300 VYLQGFSSSMPPALQDEMIRTLPGFERAVIQRYAYAVEYDALDPTQLDTTLMSKRLPGLF 359 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAAAQGLVAG+N+AR + + R + YIGV++DDL G+ EPY Sbjct: 360 SAGQINGTSGYEEAAAQGLVAGVNAARFAAGQRPVSVRRDEGYIGVLLDDLVRWGIDEPY 419 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSR EYR+ R DNAD RL P+G G +++ LR+L +S Sbjct: 420 RMLTSRNEYRLLHRQDNADERLLPLGHAWG-------------LRDDAALRALRRSEAAV 466 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS-ICPDARKFSSLVIERLQIESSYA 543 + L + + DG A L P L + P S +++I + YA Sbjct: 467 AAELERLRRT-RIDGV--PADRVLCRPGMHYAALLERLGPPTPPLSPEEARKVEILTKYA 523 Query: 544 AYTGRQMIEAK-EIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMT 602 AY R E + +E L DF + +LS E E L +P L A ++ G+ Sbjct: 524 AYIERSRRELQARAAYETLDLTRTDF--RRVGSLSAEGLEVLLRERPATLGAAGRLRGVR 581 Query: 603 PAALNLLLIYIKKNT 617 + L LL++ ++ + Sbjct: 582 DSDLTALLVHCRRRS 596 >gi|218662616|ref|ZP_03518546.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rhizobium etli IE4771] Length = 299 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 193/295 (65%), Positives = 228/295 (77%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M YDVIVIGGGHAG EAA+ AA+LGA TAL+TH+ TIG MSCNPAIGGLGKGHLVR Sbjct: 5 MTGNVYDVIVIGGGHAGTEAASAAARLGAKTALVTHRRDTIGVMSCNPAIGGLGKGHLVR 64 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDA+DGLMGRVAD AGIQFR+LN KKG AVRGPRTQADR LYRLAM I + LD++ Sbjct: 65 EIDAMDGLMGRVADLAGIQFRMLNRKKGAAVRGPRTQADRMLYRLAMLAAIEATPGLDIV 124 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 +G+ + N ++ ++M+D ++ VVLTTGTFLRG+IHIG K PAGR+G+ PS Sbjct: 125 EGDAFDLDVVDNRVAGVIMKDGRRLKAPAVVLTTGTFLRGLIHIGSDKTPAGRVGEPPSL 184 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 L + + GRLKTGTPARLDGKTI W +Q ADE L+PFSFMTD IT RQIEC Sbjct: 185 GLSATLARLGLRLGRLKTGTPARLDGKTIDWQSVGRQGADEDLVPFSFMTDSITTRQIEC 244 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFL 295 G+TRT THRII++NIK SA+YSG I+ GPRYCPSIEDK+V+FGER+GHQ+FL Sbjct: 245 GVTRTTEATHRIIVDNIKRSAMYSGQIEGVGPRYCPSIEDKLVKFGERDGHQVFL 299 >gi|325916837|ref|ZP_08179088.1| glucose-inhibited division protein A [Xanthomonas vesicatoria ATCC 35937] gi|325536988|gb|EGD08733.1| glucose-inhibited division protein A [Xanthomonas vesicatoria ATCC 35937] Length = 477 Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust. Identities = 205/475 (43%), Positives = 297/475 (62%), Gaps = 15/475 (3%) Query: 151 VLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTII 210 +LT GTFL G IH+G+ + AGRMGD P+ +L + F RLKTGTP R+DG+++ Sbjct: 1 MLTAGTFLAGKIHVGETQYAAGRMGDPPATTLAARLRERPFAIDRLKTGTPPRIDGRSLD 60 Query: 211 WDKTEKQFADERLIPFSFMTDKITN-RQIECGITRTNLETHRIIMENIKHSAIYSGDIKS 269 + +Q D+ L SFM + RQ+ C IT+T +TH II + S +YSG I+ Sbjct: 61 YGVMVEQPGDDPLPVMSFMGQVGDHPRQVSCWITQTTEQTHDIIRNALHRSPLYSGQIEG 120 Query: 270 YGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGL 329 GPRYCPSIEDK+VRF E+ HQIF+EPEGL +YPNGIST+LP ++Q +R+I G Sbjct: 121 IGPRYCPSIEDKVVRFAEKTSHQIFVEPEGLEVTEIYPNGISTSLPFDVQLALVRSIHGF 180 Query: 330 EKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINS 389 + +I RPGYAIEYD+ +P+ L +LETK + GLF AGQINGTTGYEEAAAQGL+AG+N+ Sbjct: 181 AQAHITRPGYAIEYDFFDPRGLKASLETKAVGGLFFAGQINGTTGYEEAAAQGLLAGLNA 240 Query: 390 ARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPI 449 AR L R ++Y+GV++DDL + G EPYRMFTSRAEYR+ LR DNAD RLT + Sbjct: 241 ARHVQGLPAWSPRRDEAYLGVLVDDLITHGTTEPYRMFTSRAEYRLQLREDNADARLTGV 300 Query: 450 GMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKN------LSSTSISFKQDGKTRT 503 G +G + + R RF+ ++ + L +L T N + +S ++ Sbjct: 301 GRAMGLVDDLRWARFSAKQEQVQRETTRLSALWATPGNALGREVTQTLGVSLSRETNV-- 358 Query: 504 AYEFLSYPDFSIQNLF---SICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEE 560 + + P+ + L ++ P + V E+++I YA Y RQ + + +E Sbjct: 359 -LDLIKRPELNYAALMRVPTLGPGVD--DTQVAEQVEISVKYAGYLDRQRDDIARQQRQE 415 Query: 561 KRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 IP+ FDY+++ LS E+++KL ++P ++ QA +I GMTPAA++LLL+++++ Sbjct: 416 TTPIPEGFDYANVRGLSIEVQQKLERVRPQHIGQAQRIPGMTPAAISLLLVHLER 470 >gi|289668143|ref|ZP_06489218.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 477 Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust. Identities = 206/475 (43%), Positives = 291/475 (61%), Gaps = 15/475 (3%) Query: 151 VLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTII 210 +LT GTFL G IH+G+ + AGRMGD P+ +L + F RLKTGTP R+DG+T+ Sbjct: 1 MLTAGTFLAGKIHVGETQYAAGRMGDPPATTLAARLRERPFAIDRLKTGTPPRIDGRTLD 60 Query: 211 WDKTEKQFADERLIPFSFMTDKITN-RQIECGITRTNLETHRIIMENIKHSAIYSGDIKS 269 + +Q D+ L SFM + RQ+ C IT+T +TH II + S +YSG I+ Sbjct: 61 YSVMVEQPGDDPLPVMSFMGQVSDHPRQVSCWITQTTEQTHEIIRNALHRSPLYSGQIEG 120 Query: 270 YGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGL 329 GPRYCPSIEDK+VRF E+ HQIF+EPEGL +YPNGIST+LP ++Q +R+I G Sbjct: 121 IGPRYCPSIEDKVVRFAEKTSHQIFVEPEGLEVAEIYPNGISTSLPFDVQLALVRSIHGF 180 Query: 330 EKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINS 389 + I RPGYAIEYD+ +P+ L +LETK + GLF AGQINGTTGYEEAAAQGL+AG+N+ Sbjct: 181 AQAYITRPGYAIEYDFFDPRGLKASLETKAVGGLFFAGQINGTTGYEEAAAQGLLAGLNA 240 Query: 390 ARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPI 449 AR L R ++Y+GV++DDL + G EPYRMFTSRAEYR+ LR DNAD RLT + Sbjct: 241 ARHVQGLPAWSPRRDEAYLGVLVDDLITHGTTEPYRMFTSRAEYRLQLREDNADARLTGV 300 Query: 450 GMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQD---GKTRTAYE 506 G ++G + + R RF+ + + L +L T N ++ + + Sbjct: 301 GHEMGLVDDARWARFSAKQEAVQRETARLSTLWATPGNALGREVADALGVTVSRETNVLD 360 Query: 507 FLSYPDFSIQNLFSI------CPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEE 560 + P+ + L + DA+ V E+++I YA Y RQ + + E Sbjct: 361 LIKRPELNYVTLMRVPTLGPGVDDAQ-----VAEQVEISVKYAGYLDRQRDDIARQQRHE 415 Query: 561 KRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 IP FDY+ + LS E+++KL ++P ++ QA +I GMTPAA++LLL+++++ Sbjct: 416 TTPIPDGFDYAVVRGLSIEVQQKLERVRPQHIGQAQRIPGMTPAAISLLLVHLER 470 >gi|254672744|emb|CBA06743.1| glucose inhibited division protein A [Neisseria meningitidis alpha275] Length = 518 Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust. Identities = 221/512 (43%), Positives = 313/512 (61%), Gaps = 12/512 (2%) Query: 113 SQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAG 172 +QENLD+ Q V + + IS ++ + VVLT GTFL G IHIG G Sbjct: 4 NQENLDLFQQAVEDVTLDGDRISGVITAMGVEFKARAVVLTAGTFLSGKIHIGLENYEGG 63 Query: 173 RMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-- 230 R GD + SL + + GRLKTGTP R+DG+TI + + +Q D P M+ Sbjct: 64 RAGDPAAKSLGGRLRELNLPQGRLKTGTPPRIDGRTIDFSQLTEQPGD---TPVPVMSVR 120 Query: 231 --DKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGER 288 ++ RQ+ C IT TN +TH II S +++G I+ GPRYCPSIEDKI RF ++ Sbjct: 121 GNAEMHPRQVSCWITHTNTQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADK 180 Query: 289 NGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINP 348 + HQIFLEPEGL T YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P Sbjct: 181 DSHQIFLEPEGLTTHEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDP 240 Query: 349 KELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYI 408 + L +LETK I+GLF AGQINGTTGYEEAAAQGL+AG N+ + + D + R +Y+ Sbjct: 241 RNLKASLETKTIAGLFFAGQINGTTGYEEAAAQGLLAGANAVQYVREQDPLLLRREQAYL 300 Query: 409 GVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYI 468 GV++DDL +KGV EPYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + Sbjct: 301 GVLVDDLITKGVNEPYRMFTSRAEYRLQLREDNADMRLTEDGYKIGLVGEAQWRMFNEKR 360 Query: 469 QEYNFLRSLLKSLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI--CP 523 + LK+ T + L+ + ++ + ++ L P+ L ++ Sbjct: 361 EAIEREIQRLKTTWYTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGAM 420 Query: 524 DARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEK 583 + + S+ V+E+++I+ Y Y RQ E + E +P+D DYS + LS E+++K Sbjct: 421 PSERLSAEVVEQVEIQVKYQGYIDRQNEEIDSRRDIETLKLPEDIDYSKVKGLSAEVQQK 480 Query: 584 LSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 L+ KP + QAS+I G+TPAA+ LL++++K+ Sbjct: 481 LNQHKPETVGQASRISGVTPAAVALLMVHLKR 512 >gi|12045240|ref|NP_073051.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Mycoplasma genitalium G37] gi|1346131|sp|P47619|MNMG_MYCGE RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|3844967|gb|AAC71606.1| glucose-inhibited division protein A [Mycoplasma genitalium G37] gi|166078798|gb|ABY79416.1| glucose-inhibited division protein A [synthetic Mycoplasma genitalium JCVI-1.0] Length = 612 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 222/599 (37%), Positives = 334/599 (55%), Gaps = 6/599 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 S+ + VIG GHAG EAA + +K L+ + +GS CNP+IGG KG + REID Sbjct: 2 SFIITVIGAGHAGLEAAFIVSKFNIKVNLLVLDINHLGSCPCNPSIGGPAKGIVTREIDV 61 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G+ AD +Q+++LN KGPAV+ R Q D+ Y+ Q ++ +N+++IQ E Sbjct: 62 LGGMQAIAADNNALQYKLLNSSKGPAVQAIRAQIDKIGYKNWFQSQVKLNKNINLIQSEA 121 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 I ++++D S + V++TTGT+LR + G G S L Sbjct: 122 INLIVRNEKIKGVILKDGSELLSDAVIITTGTYLRSKTYCGNTVKNQGPDQSKNSEKLST 181 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--NRQIECGI 242 + + F T RLKTGTP R+ ++ +++ E + + + + FS +QI C + Sbjct: 182 NLINRGFKTIRLKTGTPPRILKTSLDYNQMELEINNNQNLAFSTTNKNFLPLEKQIPCYL 241 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 TN + H +I++N+K SA+++G I + GP YCPSIEDK+ +F ++ HQIF+EPE L+ Sbjct: 242 VHTNQKIHDLILKNLKKSAMFNGSISAQGPLYCPSIEDKVFKFSQKPRHQIFVEPESLSL 301 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 D +Y G+ST+ EIQ + I+ +PG + I + GYAIEYD +L PTLETK I Sbjct: 302 DTIYLAGLSTSFTPEIQKEIIQLLPGFQNAEIKKFGYAIEYDAFLSNQLKPTLETKLIEN 361 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQINGT+GYEEAA QGL+AGIN+A K K R ++YIGVMI+DL +K + + Sbjct: 362 LYFAGQINGTSGYEEAAGQGLMAGINAALKLLKKPPFILQRNEAYIGVMINDLVTKTISD 421 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYR+ TSRAEYR+ LR DN RL +LG ++ + F K ++ L S LK+ Sbjct: 422 PYRLLTSRAEYRLWLRNDNVQERLIKKSFELGLTDKKTYELFLKKEKKKQELISFLKNTQ 481 Query: 483 LTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSY 542 + ++ F ++ Y+F + ++ L P+ + S +++++IE Y Sbjct: 482 VG----KVKALKFTNKNTAQSLYDFNKRSEINLDKLIKDLPEKYQLDSETLKQIEIEIKY 537 Query: 543 AAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y + K + K IP FDY + L++E KLS KP NL AS+I G+ Sbjct: 538 EGYIKKNEKYFKGLDKLSKIKIPHTFDYHKVKNLASEAIFKLSNFKPSNLAIASQIAGV 596 >gi|71028266|ref|XP_763776.1| glucose inhibited division protein A [Theileria parva strain Muguga] gi|68350730|gb|EAN31493.1| glucose inhibited division protein A, putative [Theileria parva] Length = 615 Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust. Identities = 224/544 (41%), Positives = 313/544 (57%), Gaps = 78/544 (14%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIG----------------------- 42 +DV+V+GGGH+G EAA +A++GA+T LIT S+IG Sbjct: 33 FDVLVVGGGHSGIEAATASARIGANTLLITPNLSSIGISIGFSSEILFNLVNSVIYTCVM 92 Query: 43 ------------------------SMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGI 78 +SCNP+IGG+GKG+LV EIDALDG+MG AD + I Sbjct: 93 RFRRFTKLNINSKYNKKCKIEFTGELSCNPSIGGIGKGNLVCEIDALDGVMGMCADLSAI 152 Query: 79 QFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV---------AGFNT 129 FR LN KGPAV GPR Q DR+LY++ +++ + + NL +Q V + Sbjct: 153 SFRCLNTSKGPAVVGPRVQIDRDLYKINLRKLLENYPNLFFLQDFVDELLLNSGDSNDTV 212 Query: 130 EKNIISS----------IVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMG---- 175 + N + S + M+D +I+ V+LTTGTFL+G HI K GR+ Sbjct: 213 DTNTVDSDTGSTMNVEGVRMKDGGVIKSKCVILTTGTFLKGRCHISKQTYGGGRINRITG 272 Query: 176 --DSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-- 231 +S +++L N F K +T R KTGTPARLD K+I ++ E Q +DE FS++ + Sbjct: 273 EFESAADNLSNIFNKLGINTLRFKTGTPARLDRKSINFENLEVQESDENPKFFSYLNEDF 332 Query: 232 KITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGH 291 K+TN+ I C T+TN H I+ N+ + Y+ + GPRYCPSI K+++ H Sbjct: 333 KVTNQLINCYKTQTNERVHSIVRNNLHNLPDYTSGL---GPRYCPSISTKVMKHPGIKSH 389 Query: 292 QIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKEL 351 ++LEPEG+N+D++YPNG+S + Q + +R I GLE V I+ P Y +EYD I+P L Sbjct: 390 IVWLEPEGVNSDIIYPNGLSGSFDINTQREMLRNIKGLENVKILTPAYDVEYDLIDPTNL 449 Query: 352 FPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKS-NKLDCICFSRTDSYIGV 410 TLE KKI+ LFLAGQI GTTGYEEA + G++AGINSA KS N + +R + YIGV Sbjct: 450 KYTLELKKINNLFLAGQICGTTGYEEAGSLGVIAGINSALKSLNINEPFVINRNEGYIGV 509 Query: 411 MIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQE 470 +IDDL KG+ EPYRMFTSR+EYR+ R DN D R+ G+K G I +++ K + Sbjct: 510 LIDDLIRKGITEPYRMFTSRSEYRLQNRIDNGDVRMLIKGIKYGVIRNKKRLDLMKNNEN 569 Query: 471 YNFL 474 + F+ Sbjct: 570 FKFM 573 >gi|326916316|ref|XP_003204454.1| PREDICTED: protein MTO1 homolog, mitochondrial-like [Meleagris gallopavo] Length = 590 Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust. Identities = 222/540 (41%), Positives = 327/540 (60%), Gaps = 28/540 (5%) Query: 102 LYRLAMQREILSQENL--------DVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLT 153 L L+ +EILS L D++ E + K ++ +V+ D S + +V+LT Sbjct: 12 LRNLSANKEILSTPLLTVREASVEDLLLTEPEANHPGKCQVTGVVLGDGSTVCAGSVILT 71 Query: 154 TGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDK 213 TGTFLRGVI +G PAGR+GD P+ L + K F GRLKTGTP RL +I + Sbjct: 72 TGTFLRGVILMGLETHPAGRLGDQPAVGLAQTLEKLGFTVGRLKTGTPPRLAKDSINFSG 131 Query: 214 TEKQFADERLIPFSFMTDKITNR---QIECGITRTNLETHRIIMENIKHSAIYSGDIKSY 270 E++ D +PFSF++ + + Q+ C +T TNL+ +I+++N+ + K Sbjct: 132 LEERVPDNPPVPFSFLSKAVWIKPEDQLLCYMTHTNLKAQQIVLDNLHLNDHVRETAK-- 189 Query: 271 GPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLE 330 GPRYCPS E K++RF R HQ++LEPEGL +DV+YP G+S LP E+Q Q IR+IPGLE Sbjct: 190 GPRYCPSFESKVLRFPNRE-HQVWLEPEGLESDVIYPQGLSMTLPPELQEQVIRSIPGLE 248 Query: 331 KVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSA 390 K I++PGY ++YD+++P++L +LE++ + LF AGQINGTTGYEEAAAQG++AGIN+ Sbjct: 249 KAKILQPGYGVQYDFLDPRQLTASLESRLVQRLFFAGQINGTTGYEEAAAQGVIAGINAC 308 Query: 391 RKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIG 450 + SRT+ Y+GV+IDDLT+ G EPYRMFTSR E+R+SLRPDNAD RLT G Sbjct: 309 LRVQGKPPFIVSRTEGYVGVLIDDLTTLGTTEPYRMFTSRVEFRMSLRPDNADARLTHRG 368 Query: 451 M-KLGCIGERRQKRFAKYIQEYNFLR---SLLKSLVLTSKNLSSTSISFKQDGKTR---T 503 + GC+ Q+R+ + IQ + + LKSL + S R + Sbjct: 369 FEEAGCVS---QQRYEQAIQMRAAIEDGIATLKSLQFSVSRWSHLVPEVPISSNRRSPLS 425 Query: 504 AYEFLSYPDFSIQNLFSICPDA-RKFSSL--VIERLQIESSYAAYTGRQMIEAKEIKFEE 560 A++ L YP+ ++ L P+ RK + + ERL+IE++Y Q E +E++ +E Sbjct: 426 AFDILRYPEANMDILARAIPEPLRKLAEWRELSERLKIEAAYEWCVINQQQEIEEVRRDE 485 Query: 561 KRLIPKDFDYSSLPA-LSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 +P+D DY ++ A LS E++EKL+ +P + S+I G+TPAA+ LL ++K +K Sbjct: 486 ALRLPEDIDYFAIDASLSAEVREKLNSSRPQTIGAVSRIPGVTPAAIINLLRFVKAEKLK 545 >gi|149408726|ref|XP_001506626.1| PREDICTED: similar to coronin, actin binding protein, 2B [Ornithorhynchus anatinus] Length = 1086 Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust. Identities = 219/497 (44%), Positives = 316/497 (63%), Gaps = 21/497 (4%) Query: 135 SSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTG 194 SS + D S + +V+LTTGTFLRG++ IG + PAGR+GD PS L + + F G Sbjct: 499 SSQSISDGSKVPAESVILTTGTFLRGMVLIGLEEHPAGRLGDQPSVGLAQTLEELGFVLG 558 Query: 195 RLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR---QIECGITRTNLETHR 251 RLKTGTP R+ ++ + +K D +PFSF+++K+ R Q+ C +T TN E + Sbjct: 559 RLKTGTPPRIAKDSVNFSILKKTTPDNPPVPFSFLSEKVWIRPEDQLPCYLTFTNSEVEQ 618 Query: 252 IIMENIKHSAIYSGDIK--SYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNG 309 I+ ENI + +K + GPRYCPSIE K++RF R HQI+LEPEGL++D++YP G Sbjct: 619 IVRENIH----LNNHVKETTRGPRYCPSIESKVLRFPNRV-HQIWLEPEGLDSDLIYPQG 673 Query: 310 ISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQI 369 +S LP E+Q Q I I GLEK I++PGY ++YD+++P+++ P+LETK + LF AGQI Sbjct: 674 LSVTLPAELQEQLITRIKGLEKAKIVQPGYGVQYDFLDPRQITPSLETKLVQRLFFAGQI 733 Query: 370 NGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTS 429 NGTTGYEEAAAQG+VAGIN++ K SRT+ YIGV+IDDLT+ G EPYRMFTS Sbjct: 734 NGTTGYEEAAAQGVVAGINASLKVRGKPPFIISRTEGYIGVLIDDLTTLGTSEPYRMFTS 793 Query: 430 RAEYRISLRPDNADNRLTPIGM-KLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNL 488 R E+R+SLRPDNAD+RLT G + GC+ +R +R + S+LKS+ +S Sbjct: 794 RVEFRLSLRPDNADSRLTFRGYEEAGCVSRQRYERASMVKSSLEEGISVLKSVQFSSTKW 853 Query: 489 S----STSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA-RKF--SSLVIERLQIESS 541 S IS + +A + L+Y + ++ L + PD +KF S + ERL+IE+ Sbjct: 854 SRLIPELPISLSKSVPC-SALDILTYEEVDLEKLAKVIPDPLKKFVESRELTERLKIEAI 912 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLP--ALSNELKEKLSILKPFNLLQASKIE 599 Y Q E +E++ +E +P+D DY S+ +LS+E++EKL+ +P + AS+I Sbjct: 913 YETMISLQQQEIEEVRRDEALQLPEDLDYMSIQTVSLSHEVREKLNSNRPRTIGAASRIP 972 Query: 600 GMTPAALNLLLIYIKKN 616 G+TPAA+ LL ++K + Sbjct: 973 GVTPAAIVNLLRFVKSS 989 >gi|298704862|emb|CBJ28379.1| conserved unknown protein [Ectocarpus siliculosus] Length = 808 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 216/404 (53%), Positives = 268/404 (66%), Gaps = 21/404 (5%) Query: 16 AGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADA 75 AGCEAA+ +A+ GA T L+T K TIG +SCNP+IGG+GKGH+VRE+DALDG+MGRV D Sbjct: 15 AGCEAASASARAGARTVLVTQKKETIGELSCNPSIGGIGKGHIVREVDALDGVMGRVIDR 74 Query: 76 AGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIIS 135 AGI FR+LN +KGPAVRGPR QADR+LYR AMQ E+ NL V +G V E I Sbjct: 75 AGIHFRMLNRRKGPAVRGPRAQADRDLYRTAMQEEMHGTPNLSVFEGSVEDVLLEGEAIK 134 Query: 136 SIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGR-MGDS-----PSNSLFNSFMKF 189 IV D + I C VV+TTGTFLRG +IG+ AGR + DS PS L + +F Sbjct: 135 GIVTADGTEIACKGVVITTGTFLRGKCYIGQEWYWAGRHLRDSAHVEPPSVGLAETLERF 194 Query: 190 DFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD----KITNRQIECGITRT 245 F GRLKTGTP RLDG TI W E Q ++ +PFS+M + ++ I C T T Sbjct: 195 KFPLGRLKTGTPPRLDGNTINWGILEAQPSEVPPLPFSYMNALTGVSMADKLISCAKTYT 254 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N ETHRI++ N + + GPRYCPSI K+ RF +R H FLEPEGLNT+VV Sbjct: 255 NEETHRIVIAN--GHKLPEPSVDGVGPRYCPSIFKKVERFPDRLQHLSFLEPEGLNTNVV 312 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 YPNG+S P +IQ Q +R++ GLE+V IIRPGY +EYDY++P+ TLETKKI GL+L Sbjct: 313 YPNGMSGPFPADIQLQVMRSMKGLEEVEIIRPGYDVEYDYVDPRSCRHTLETKKIKGLYL 372 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARK------SNKLDCICFSR 403 AGQI GTTGYEEAAAQG+VAG AR+ N++ +SR Sbjct: 373 AGQICGTTGYEEAAAQGIVAG---ARRGACCGVENQVGATSYSR 413 Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 52/140 (37%), Positives = 72/140 (51%), Gaps = 9/140 (6%) Query: 384 VAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNAD 443 + G N+ K+ R + YIGV++DDL +KG EPYRMFTSRAEYR+ +R DNAD Sbjct: 460 LTGANAGLKAVGRPEFTVGRDEGYIGVLVDDLVTKGADEPYRMFTSRAEYRLYMRADNAD 519 Query: 444 NRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL--LKSLVLTSKNLSSTSISFK----- 496 RLT G + G +GE R + +E SL LK LT + + Sbjct: 520 LRLTAKGYEAGIVGEERMEFM--MAREAAVSESLYELKRFSLTVGGWQGYGLDLQFGNKG 577 Query: 497 QDGKTRTAYEFLSYPDFSIQ 516 DG+ + A E + PD ++ Sbjct: 578 ADGRRKNAAEMVQLPDVPLE 597 Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust. Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 18/156 (11%) Query: 474 LRSLLKSLVLTSKNLSSTS----ISFKQDGKTRTAYEFL------SYPDFSIQNLFSICP 523 LRS K+L K + + I + Q + R E L S + S + F P Sbjct: 615 LRSREKALDAAVKAMGVEATLKDIGWDQVAEGRDPLEVLEDVREASARELSKVSTFERTP 674 Query: 524 DARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSS--LPALSNELK 581 D E ++ Y Y RQ+ E + + ++ IP D Y+ LP++S E Sbjct: 675 D------FARETVEASCKYMNYMDRQVKEMESWRRNQEFRIPADIQYTHDLLPSMSAEEL 728 Query: 582 EKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNT 617 EKL+ ++P AS+++G+TP +L L ++ + + Sbjct: 729 EKLNTVRPETFAAASQMQGITPHSLVYLYNHVTRKS 764 >gi|320335882|ref|YP_004172593.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Deinococcus maricopensis DSM 21211] gi|319757171|gb|ADV68928.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Deinococcus maricopensis DSM 21211] Length = 612 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 247/616 (40%), Positives = 353/616 (57%), Gaps = 27/616 (4%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +++V+VIGGGHAG EAA AAK A TAL+ +T+G M CNPA+GG GK +V E+ A Sbjct: 9 TWNVLVIGGGHAGIEAAWAAAKY-ARTALMISNPATLGRMPCNPAVGGPGKSQIVFELTA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 + GLMGR+AD I RVLN KGPAV+ R Q +R+ Y Q +L N+D+++ E Sbjct: 68 MGGLMGRLADETAIHTRVLNASKGPAVQSLRVQNERDAYAERAQDVMLGHPNVDILRAEA 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 A ++ +V D +VV+ GTF+RGV G+ P GR G+ P+ L Sbjct: 128 ADLESDGRGGWFVVSTDGRRFHARSVVIAAGTFMRGVTWYGRQSRPEGRQGEPPARFLSA 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR--QIECGI 242 + R KTGTP R+ + ++ E AD + P F T + R Q Sbjct: 188 PLARGGHALKRYKTGTPPRVRADAVDFEALEVIPADPQ--PRGF-TGRPGPRAAQSPTWQ 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T T ETHR+I EN+ S +Y+GDI+ GPRYCPSIEDK+VRF + H +F+EP+G+ T Sbjct: 245 THTTPETHRLINENLHESPMYAGDIEGLGPRYCPSIEDKVVRFAHHDRHLLFVEPDGVET 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 VY G S++LP +Q Q +RT+PG E+ I R YA+EYD ++ EL LE+++++G Sbjct: 305 SEVYLQGFSSSLPPALQDQLVRTLPGFERAVIQRYAYAVEYDVVDSTELTLNLESRRLAG 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 ++ AGQINGT+GYEEAAAQGLVAG +AR++ L SR YIGVM+DDL+ KG E Sbjct: 365 VYTAGQINGTSGYEEAAAQGLVAGAAAARRALGLGEEIVSRETGYIGVMLDDLSFKGSDE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCI-GERRQKRFAKYIQEYNFLRSLLKSL 481 PYRM TSR E+R+ +R DNAD R+TP+ LG + E R + KY + Sbjct: 425 PYRMMTSRVEHRLLVRQDNADERMTPLAHALGLVDAEERARVQTKYGR------------ 472 Query: 482 VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 + + + +G TAY L P+F + +L ++ S+ E L+I Sbjct: 473 ---IAEAEAQLAAQRVNGTDGTAY--LRRPEFGLSDLDALGFTLPLLSAEEREALEIRVK 527 Query: 542 YAAYTGRQMIE-AKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 YA Y R + A E K + L DY+ +P+LS E +EKL+ +P L QAS++ G Sbjct: 528 YAGYIDRARRQLASEAKARDLALT--GVDYARVPSLSQEAREKLTRAQPLTLDQASRVPG 585 Query: 601 MTPAALNLLLIYIKKN 616 + + + LL+++++ Sbjct: 586 VRHSDITSLLVHLRQQ 601 >gi|301168597|emb|CBW28187.1| glucose inhibited division protein A [Bacteriovorax marinus SJ] Length = 615 Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust. Identities = 234/618 (37%), Positives = 355/618 (57%), Gaps = 22/618 (3%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +D+ +IGGGHAG EAA ++++ +++ + S CNPA+GG+GKG +VREID Sbjct: 2 QKFDIAIIGGGHAGVEAAWISSQFDLKVLILSMPNVGLASTPCNPAVGGVGKGQVVREID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL GLMG++AD + IQ+R+LN KG AV+ R Q D++LY + I + N+ V++ + Sbjct: 62 ALGGLMGQLADQSAIQYRILNESKGYAVQSTRVQVDKDLYTKNAEAMIAANPNITVVKEK 121 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGR---MGDSPSN 180 V + EKN + + S + ++TTGTFL G +H G++ GR M + Sbjct: 122 V--ISVEKNGDQFSIKTEASYFNTTKCIVTTGTFLNGKLHTGEVSTSGGRVDCMASAGMG 179 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN--RQI 238 +F+S R KTGTPAR++ ++ + K +Q +D R F + + Q+ Sbjct: 180 EIFSSVQTLGI---RFKTGTPARINKDSLDYSKFVEQKSDGRTKNFHSLNNPYERFVDQV 236 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C I TN T II +N + S IY+G IK GPRYCPSIEDK R+ +RN H +F+EPE Sbjct: 237 SCYIAHTNERTLGIIRDNKERSPIYNGQIKGVGPRYCPSIEDKAFRYPDRNSHHVFVEPE 296 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL+ + +YPNG+ST+LP+E+Q +F+RTI G E+ I GYA+EYD ++ +L LE Sbjct: 297 GLSANTIYPNGVSTSLPKEVQLEFLRTIEGFEECEIELYGYAVEYDVVDTSKLSDCLEYI 356 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I GLF AGQ+NGT+GYEEAA QGL+AG N+A D + R +SYIGVM++DL S Sbjct: 357 DIPGLFFAGQVNGTSGYEEAAGQGLIAGANAALSMKGKDNLVLDRAESYIGVMVEDLISN 416 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 EPYR+FT+R+E R+ +R DN+ NR+ ++G + + K ++I+E+ L L Sbjct: 417 KRDEPYRLFTARSENRLYVREDNSINRMAKYRFQMG-LDKEIDKYQQEFIEEFELLLGLC 475 Query: 479 K--SLVLTSKNLSS-TSISFKQDGKTRTAYEFLSYPDFS-IQNLFS-ICPDARKFSSLVI 533 K S+ +T +N S+ + K T E + + ++ L + FSS V+ Sbjct: 476 KSTSIYVTPENKEYFASMGYGDLSKNITLSELVRRSQLNPVETLEQELSKRGALFSSEVV 535 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSL--PALSNELKEKLSILKPFN 591 + Y Y R +IE + I RL K D+ S+ +SNE ++++ +KP Sbjct: 536 YTCAVSIKYEGYINRSLIENERI----YRLGRKKIDWQSIVRGNISNECRQRIEEVKPTT 591 Query: 592 LLQASKIEGMTPAALNLL 609 Q +I+G+ PA L + Sbjct: 592 FSQLQRIDGIRPATLAFV 609 >gi|68074703|ref|XP_679268.1| glucose inhibited division protein A [Plasmodium berghei strain ANKA] gi|56499976|emb|CAI00294.1| glucose inhibited division protein A homologue, putative [Plasmodium berghei] Length = 863 Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust. Identities = 235/547 (42%), Positives = 314/547 (57%), Gaps = 91/547 (16%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIGGGH GCEA+ ++AKLGA T LIT +IG MSCNP+IGG+GKG LV+EID Sbjct: 9 KKYDVIVIGGGHGGCEASYISAKLGAKTLLITQCKESIGEMSCNPSIGGIGKGILVKEID 68 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL GLMG+V D +GI F++LN+KKG AVRG R QADR+LY M+ + + NL +++ Sbjct: 69 ALGGLMGKVIDKSGIHFKILNLKKGLAVRGHRAQADRDLYNYYMKEYMFNMPNLYILENT 128 Query: 124 VAGFNTEKNII--SSIVMQDNSMIR--------CS------TVVLTTGTFLRGVIHI--- 164 E ++ S M++ + CS V+LTTGTFL G+ HI Sbjct: 129 AHSLLIENSMTRNDSTNMEEKKKCKYVYGIKNKCSCEFYADNVILTTGTFLGGICHIGKD 188 Query: 165 ----GKLKIPAGRMGDS------------------------------------------P 178 G++K G+ D+ Sbjct: 189 KYKGGRIKRILGKGKDNQLTDAGTINSSKIKKETNKNKMQKINDIHNCIGNNNDNKNEME 248 Query: 179 SNSLFNSFMK------------FDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPF 226 NS+F + ++ +F+ R+KTGTP RL +I +D EK+ E+ PF Sbjct: 249 PNSIFYNLIEESTKNIATQLKENNFEIKRMKTGTPPRLCKNSINFDILEKE-GTEKKHPF 307 Query: 227 SFM---TDKITN-RQIECGITRTNLETHRIIMENIKHSAIYSG-DIKSYGPRYCPSIEDK 281 F ++KI N + + C T TN++TH ++++ + + D GPRYCPSI K Sbjct: 308 YFSFLNSNKINNNKTLPCYKTYTNIKTHELVIKYLNELPDFDCYDKLGNGPRYCPSIAKK 367 Query: 282 IVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAI 341 + +F E+ H I+LEPEG N ++YPNG+S+A P Q + I +I GLE I+ P Y + Sbjct: 368 VTKFSEKKKHIIWLEPEGFNNILIYPNGLSSAYPLNRQQEIINSIKGLENAKILFPAYDV 427 Query: 342 EYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNK------ 395 EY Y+NPK L TLETK I+GLFL+GQI GTTGYEEAA QG+VAGIN+A S K Sbjct: 428 EYFYVNPKCLNYTLETKIINGLFLSGQICGTTGYEEAACQGIVAGINAALNSLKKKNINI 487 Query: 396 --LDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKL 453 ++ +R DSYIGV+I DL +KG+ EPYRMFTSRAEYR+ LRPDNAD RLTP KL Sbjct: 488 SSINNFVLTRNDSYIGVLIHDLINKGITEPYRMFTSRAEYRLYLRPDNADIRLTPKVAKL 547 Query: 454 GCIGERR 460 G + R Sbjct: 548 GIASKER 554 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 2/84 (2%) Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPK--DFDYSSLPALSNELKEKLSILKP 589 V+E E Y++Y +Q+ E +IK IPK +D ++ P LSNE EKL+ +P Sbjct: 766 VLETACAEVKYSSYLKKQINEINKIKNNFNLAIPKTIKYDRNNFPYLSNEEIEKLTKFRP 825 Query: 590 FNLLQASKIEGMTPAALNLLLIYI 613 NL +A+KIEG+T + + L YI Sbjct: 826 SNLNEANKIEGVTMSGIYYLYHYI 849 >gi|326435253|gb|EGD80823.1| hypothetical protein PTSG_11724 [Salpingoeca sp. ATCC 50818] Length = 540 Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust. Identities = 190/464 (40%), Positives = 288/464 (62%), Gaps = 8/464 (1%) Query: 164 IGKLKIPAGRMGDSPSNSLFNSFMK-FDFDTGRLKTGTPARLDGKTIIWDKTEKQFADER 222 IG +IPAGR G+ P+ L F GRL+TGTP RL +I + +Q ++ Sbjct: 75 IGTQRIPAGRKGEGPTTRLAQVLQDDCQFRMGRLRTGTPPRLHVDSIDFSGMVEQKSEYP 134 Query: 223 LIPFSFMTDKIT--NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIED 280 +PFSF+TD++ + + C +T TN E H I+ E + + ++ GPRYCPSIE Sbjct: 135 PVPFSFLTDQVDQIDNLVSCHMTYTNAEAHAIVHETLHENCHIQEEVT--GPRYCPSIES 192 Query: 281 KIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYA 340 K++RF +R+ HQ++LEPEGLN++V+YPNGIS +PEE Q +FIR +PGL+ I++PGY Sbjct: 193 KVLRFTDRDQHQVWLEPEGLNSEVIYPNGISMTMPEEAQQRFIRLMPGLQNATIVQPGYG 252 Query: 341 IEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCIC 400 + YDYI+P+EL TLETKK++GLFLAGQINGTTGYEEAA+QG++AG+N+A + L + Sbjct: 253 VAYDYIDPRELQHTLETKKVAGLFLAGQINGTTGYEEAASQGIIAGVNAASAARALPPLV 312 Query: 401 FSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR 460 R +YIGV+IDDL + GV EPYRMFTSRAEYR+++R DNAD RLT +G K GC+ E R Sbjct: 313 LDRAQAYIGVLIDDLVTNGVSEPYRMFTSRAEYRMTIRADNADVRLTELGYKAGCVSEDR 372 Query: 461 QKRFAKYIQEYNFLRSLLKSLVLT---SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQN 517 ++ + +++ L+ + S DGK R+A + + ++ Sbjct: 373 YQQSKATTDQLVACLDAMRACSLSVHEWEKFVSLQKPMAHDGKQRSALDLVGKRFVDMEQ 432 Query: 518 LFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALS 577 L ++ P+ + + ER+ IE+ Y + +Q ++ + EE+ ++P+D DY +P+L Sbjct: 433 LVTMVPELKHADHSMRERIFIEALYDQFKKKQESSIRQYRKEEQLVLPEDLDYDKVPSLP 492 Query: 578 NELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVKLN 621 E + L +P L AS++ G++ A+ LL +++K + N Sbjct: 493 REAVDALKAARPATLGAASRLRGVSAASCITLLTHVRKRKMAAN 536 Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 41/97 (42%), Positives = 51/97 (52%), Gaps = 14/97 (14%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 N YDV+VIGGGHAGCEAAA +A++GA T L+T K TIG+ PA G G+G R Sbjct: 37 NVHYDVVVIGGGHAGCEAAAASARVGARTVLVTQKKDTIGTQRI-PA-GRKGEGPTTRLA 94 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQAD 99 L QFR+ ++ G PR D Sbjct: 95 QVLQD---------DCQFRMGRLRTGTP---PRLHVD 119 >gi|253582573|ref|ZP_04859794.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG 1 [Fusobacterium varium ATCC 27725] gi|251835443|gb|EES63983.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG 1 [Fusobacterium varium ATCC 27725] Length = 616 Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust. Identities = 225/599 (37%), Positives = 342/599 (57%), Gaps = 4/599 (0%) Query: 19 EAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGI 78 EA+ AA+LG TA+ T TI MSCNP+IGG GK +LV E+D L G MGR D + Sbjct: 19 EASLAAARLGKKTAMFTLYLDTIAMMSCNPSIGGPGKSNLVAEMDILGGEMGRHTDKFNL 78 Query: 79 QFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIV 138 Q + LN KGPA R R QAD+ LYR M++ + +NL++IQ V E I I+ Sbjct: 79 QLKHLNESKGPAARITRGQADKYLYRTEMRKILEHTDNLEIIQDCVDEIIVENGRIKGII 138 Query: 139 MQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKT 198 + VVL TGTFL+G I IG + AGR G++ + L +S + R +T Sbjct: 139 TRLGIKYYAECVVLATGTFLKGKIVIGDVAYSAGRQGENSAEKLSDSLREHGITIERYQT 198 Query: 199 GTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIK 258 TP RLD ++I + K ++ +E FS TDK N + +T T +T + E ++ Sbjct: 199 ATPPRLDKRSIDFSKMKELKGEEHPRYFSIFTDKERNNVVPTWLTYTTEKTIEVAKEMLQ 258 Query: 259 HSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEI 318 +S I SG IK++GPR+CPS++ K++ F +++ HQIFLE E ++ VY NG++TA+P Sbjct: 259 YSPIVSGIIKTHGPRHCPSLDRKVINFPDKSNHQIFLELESAESEEVYVNGLTTAMPPFA 318 Query: 319 QHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEA 378 Q +RTI GLE ++R GYA+EYDY +L+P+LE+KKI GL+ AGQINGT+GYEEA Sbjct: 319 QEAMMRTIAGLENARVMRYGYAVEYDYAPAAQLYPSLESKKIEGLYFAGQINGTSGYEEA 378 Query: 379 AAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLR 438 A QG +AG+N+ARK++ + + R++ YIGV+IDD+ K EPYR+ SR+EYR++LR Sbjct: 379 ACQGFIAGVNAARKADGKEPVIIDRSEGYIGVLIDDIIHKKTPEPYRVLPSRSEYRLTLR 438 Query: 439 PDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQD 498 DNA RL ++G + + I+ N + LK + + ++ D Sbjct: 439 FDNAFMRLFTKAKEIGILSSEKLDYLENSIKIVNDEIARLKEISVPMVQANALLEKLGSD 498 Query: 499 GKTRTAY---EFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKE 555 K + L + + +L I + + + +++ Y + R+ + ++ Sbjct: 499 QKLTKGVKIGDLLKIKEVTYDSLKDIT-EINDYPGFIKNQIETMIKYEIFIQRENEQIEK 557 Query: 556 IKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIK 614 K E+ IP DFD+S + +SN + L +KP ++ +AS+I G+T + LL+ Y+K Sbjct: 558 FKRLEEVKIPADFDFSEVKGISNIARCGLEEIKPLSIGEASRISGVTGNDIALLVGYLK 616 >gi|296314586|ref|ZP_06864527.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria polysaccharea ATCC 43768] gi|296838663|gb|EFH22601.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria polysaccharea ATCC 43768] Length = 402 Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust. Identities = 198/375 (52%), Positives = 248/375 (66%), Gaps = 1/375 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 8 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 67 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY+ A++ + +QENLD+ Q Sbjct: 68 ALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKAAIREMLENQENLDLFQQA 127 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + IS ++ + VVLT GTFL G IHIG GR GD + SL Sbjct: 128 VEDVILDGERISGVITAMGVEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 187 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + GRLKTGTP R+DG+TI + + +Q D + FS + + RQ+ C I Sbjct: 188 GRLRELKLPQGRLKTGTPPRIDGRTIDFSQLTEQPGDTPVPVFSVRGNADMHPRQVSCWI 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEGL T Sbjct: 248 THTNTQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEGLTT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK I G Sbjct: 308 HEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKTIEG 367 Query: 363 LFLAGQINGTTGYEE 377 LF AGQINGTTGYEE Sbjct: 368 LFFAGQINGTTGYEE 382 >gi|257470413|ref|ZP_05634504.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Fusobacterium ulcerans ATCC 49185] gi|317064621|ref|ZP_07929106.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG 1 [Fusobacterium ulcerans ATCC 49185] gi|313690297|gb|EFS27132.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG 1 [Fusobacterium ulcerans ATCC 49185] Length = 616 Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust. Identities = 224/599 (37%), Positives = 342/599 (57%), Gaps = 4/599 (0%) Query: 19 EAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGI 78 EA+ AA+LG TA+ T TI MSCNP+IGG GK +LV E+D L G MGR D + Sbjct: 19 EASLAAARLGKKTAMFTLYLDTIAMMSCNPSIGGPGKSNLVAEMDILGGEMGRHTDKFNL 78 Query: 79 QFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIV 138 Q + LN KGPA R R QAD+ LYR M++ + +NL++IQ V E + I+ Sbjct: 79 QLKHLNESKGPAARITRGQADKYLYRTEMRKLLEHTDNLEIIQDCVDEIIVEDGKVKGII 138 Query: 139 MQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKT 198 + VVL TGTFL+G I IG + AGR G++ + L +S + R +T Sbjct: 139 TRLGIKYYAQCVVLATGTFLKGKIVIGDVAYSAGRQGENSAEKLSDSLREHGITIERYQT 198 Query: 199 GTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIK 258 TP RLD ++I + K ++ +E FS TDK N I +T T +T + E ++ Sbjct: 199 ATPPRLDKRSIDFSKMKELKGEEYPRYFSIFTDKERNNVIPTWLTYTTEKTIEVAKEMLQ 258 Query: 259 HSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEI 318 +S I SG IK++GPR+CPS++ K++ F +++ HQIFLE E ++ VY NG++TA+P Sbjct: 259 YSPIVSGIIKTHGPRHCPSLDRKVINFPDKSNHQIFLELESAESEEVYVNGLTTAMPPFA 318 Query: 319 QHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEA 378 Q +RTI GLE ++R GYA+EYDY +L+P+LE+KK+ GL+ AGQINGT+GYEEA Sbjct: 319 QEAMMRTIAGLENARVMRYGYAVEYDYAPAAQLYPSLESKKVEGLYFAGQINGTSGYEEA 378 Query: 379 AAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLR 438 A QG +AG+N+ARK++ + + R++ YIGV+IDD+ K EPYR+ SR+EYR++LR Sbjct: 379 ACQGFIAGVNAARKADGKEPVIIDRSEGYIGVLIDDIIHKKTPEPYRVLPSRSEYRLTLR 438 Query: 439 PDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQD 498 DNA RL ++G + + I+ N + LK + + ++ D Sbjct: 439 FDNAFMRLFTKAKEIGILSSEKLDYLENSIKIVNDEIARLKEISVPMVQANALLEKLGSD 498 Query: 499 GKTRTAY---EFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKE 555 K + L + + +L I + + + +++ Y + R+ + ++ Sbjct: 499 QKLTKGVKIGDLLKIKEVTYDSLKDIT-EISDYPGFIKNQIETMIKYEIFIQRENEQIEK 557 Query: 556 IKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIK 614 K E+ IP DFD+S + +SN + L +KP ++ +AS+I G+T + LL+ Y+K Sbjct: 558 FKRLEEVRIPADFDFSEVKGISNIARCGLEEIKPLSIGEASRISGVTGNDIALLVGYLK 616 >gi|321311053|ref|YP_004193382.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Mycoplasma haemofelis str. Langford 1] gi|319802897|emb|CBY93543.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Mycoplasma haemofelis str. Langford 1] Length = 618 Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust. Identities = 234/604 (38%), Positives = 336/604 (55%), Gaps = 13/604 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 IN+ +DV VIG GHAG EAA +A+K AL +I ++ CNP+IGG KG + RE Sbjct: 3 INKEFDVAVIGAGHAGLEAAFIASKFNLRVALFNLNKESIANLPCNPSIGGPAKGVVTRE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G+ AD IQ + LN KGP V R Q D+E + ++I N++++ Sbjct: 63 IDALGGIQAIAADENKIQIKKLNQSKGPGVWAYRAQIDKETFHDWFIKKIEDDPNIELLL 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 EV E + + + N + RC T+++TTGT+L+ ++ K +G + SN Sbjct: 123 EEVVELLKEGDEVKGLRTV-NGIYRCKTLIVTTGTYLKAELYREKKFADSGPDNNPASNF 181 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT--NRQIE 239 L ++F + + RLKTGTP R+ +I + + E +++ I FSF K Q+ Sbjct: 182 LSDTFRNWGIELLRLKTGTPPRVYLDSIDFSQLEVDDSNDGNISFSFREPKKLPLEEQMH 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C + T T + ++ +++ Y+G I GPRYCPSIEDK V+F R H IF+EP Sbjct: 242 CYLAETTPLTKKFVLHHLEECGTYNGSICGTGPRYCPSIEDKYVKFPNREKHFIFVEPIA 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 N D Y G+ST+L +++Q + +RTI G + V I + YAI YD INP +L TLE KK Sbjct: 302 RNYDYCYLAGLSTSLNKDLQEKLLRTIKGFQNVRIKKHAYAIVYDAINPIQLLKTLECKK 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 + LF AGQINGT+GYEEAAAQGL+AGIN++ K + R ++YIGVMIDDLT++G Sbjct: 362 VKNLFFAGQINGTSGYEEAAAQGLIAGINASLKVLNREPFILRRDEAYIGVMIDDLTTRG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 V EPYR+ TSRAE+R+ LR DNAD RL +G +LG I E + F K ++ NF LK Sbjct: 422 VTEPYRLLTSRAEHRLLLRNDNADERLLGLGRELGTIEESFYRDFLKVQEDINFNIDFLK 481 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSIC-PDARKFSSLVIERLQI 538 KN ++T ++ T + +L+ + S L I R S E+L I Sbjct: 482 ------KNYAAT---YRLAEGNLTLFSWLARGENSYSELSEILGSKLRSLSVEAQEKLMI 532 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + Y Y Q ++ K + K DYS + LS E +E+L+ +P + A KI Sbjct: 533 KVKYEGYIRAQETRINRLEKWRKLSLLKIKDYSDIQNLSREARERLNSERPITVDDALKI 592 Query: 599 EGMT 602 G+ Sbjct: 593 SGIN 596 >gi|119569150|gb|EAW48765.1| mitochondrial translation optimization 1 homolog (S. cerevisiae), isoform CRA_f [Homo sapiens] Length = 555 Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust. Identities = 210/487 (43%), Positives = 307/487 (63%), Gaps = 17/487 (3%) Query: 141 DNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGT 200 D S + +V+LTTGTFLRG+I IG PAGR+GD PS L + K F GRLKTGT Sbjct: 43 DGSTVYAESVILTTGTFLRGMIVIGLETHPAGRLGDQPSIGLAQTLEKLGFVVGRLKTGT 102 Query: 201 PARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR---QIECGITRTNLETHRIIMENI 257 P R+ ++I + K D IPFSF + + + Q+ C +T TN I+++N+ Sbjct: 103 PPRIAKESINFSILNKHIPDNPSIPFSFTNETVWIKPEDQLPCYLTHTNPRVDEIVLKNL 162 Query: 258 KHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEE 317 ++ + GPRYCPSIE K++RF R HQ++LEPEG+++D++YP G+S LP E Sbjct: 163 HLNSHVKETTR--GPRYCPSIESKVLRFPNRL-HQVWLEPEGMDSDLIYPQGLSMTLPAE 219 Query: 318 IQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEE 377 +Q + I I GLEK +I+PGY ++YDY++P+++ P+LET + LF AGQINGTTGYEE Sbjct: 220 LQEKMITCIRGLEKAKVIQPGYGVQYDYLDPRQITPSLETHLVQRLFFAGQINGTTGYEE 279 Query: 378 AAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISL 437 AAAQG++AGIN++ + ++ SRT+ YIGV+IDDLT+ G EPYRMFTSR E+R+SL Sbjct: 280 AAAQGVIAGINASLRVSRKPPFVVSRTEGYIGVLIDDLTTLGTSEPYRMFTSRVEFRLSL 339 Query: 438 RPDNADNRLTPIGMK-LGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS----KNLSSTS 492 RPDNAD+RLT G K GC+ ++R +R S+LKS+ S K + S Sbjct: 340 RPDNADSRLTLRGYKDAGCVSQQRYERACWMKSSLEEGISVLKSIEFLSSKWKKLIPEAS 399 Query: 493 ISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA-RKFSSL--VIERLQIESSYAAYTGRQ 549 IS + R A + L Y + + +L P+ +K++ + ERL+IE++Y + Q Sbjct: 400 ISTSRSLPVR-ALDVLKYEEVDMDSLAKAVPEPLKKYTKCRELAERLKIEATYESVLFHQ 458 Query: 550 MIEAKEIKFEEKRLIPKDFDYSSLP--ALSNELKEKLSILKPFNLLQASKIEGMTPAALN 607 + E K ++ +E +PKD DY ++ +LS+E++EKL +P + AS+I G+TPAA+ Sbjct: 459 LQEIKGVQQDEALQLPKDLDYLTIRDVSLSHEVREKLHFSRPQTIGAASRIPGVTPAAII 518 Query: 608 LLLIYIK 614 LL ++K Sbjct: 519 NLLRFVK 525 >gi|153870744|ref|ZP_02000079.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Beggiatoa sp. PS] gi|152072791|gb|EDN69922.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Beggiatoa sp. PS] Length = 439 Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust. Identities = 197/423 (46%), Positives = 279/423 (65%), Gaps = 3/423 (0%) Query: 195 RLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITRTNLETHRII 253 RLKTGTP RLD +++ + + Q D+ + FSF + + RQI C ITRTN +TH II Sbjct: 7 RLKTGTPPRLDSQSLDYSVMQLQPGDDPVPIFSFQGNPSQHPRQISCYITRTNEKTHEII 66 Query: 254 MENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTA 313 ++ S +Y+G I+ GPRYCPSIEDKIVRF ++N HQIF+EPEGL T VYPNGIST+ Sbjct: 67 RSGLERSPMYTGVIEGIGPRYCPSIEDKIVRFADKNSHQIFVEPEGLETFEVYPNGISTS 126 Query: 314 LPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTT 373 LP +IQ +R+I G EK +I R GYAIEYD+ +P++L P+LETK I GLF AGQINGTT Sbjct: 127 LPFDIQLALVRSITGFEKAHITRAGYAIEYDFFDPRDLQPSLETKVIKGLFFAGQINGTT 186 Query: 374 GYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEY 433 GYEEAAAQGL+AG+N+AR+ R ++Y+GV+IDDL ++G EPYRMFTSRAEY Sbjct: 187 GYEEAAAQGLIAGLNAARQVQGKPPWTPRRDEAYVGVLIDDLITRGTNEPYRMFTSRAEY 246 Query: 434 RISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSI 493 R+ LR DNAD RLT IG +LG +G+ R + F + + L+ + + + ++ + Sbjct: 247 RLLLREDNADLRLTEIGRELGLVGDTRWRSFETKKEAIETEKQRLRQIWIRPTDPATAQL 306 Query: 494 SFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA-RKFSSLVIERLQIESSYAAYTGRQMIE 552 + + + L PD S ++L + P A ++ V+++++I+ Y+ Y RQ E Sbjct: 307 KTTINREI-NCLDILRRPDVSYEDLLIMPPVATHTVAAEVMQQVEIQQKYSGYIERQQTE 365 Query: 553 AKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIY 612 ++ E +P D DY+ + LS E+ +KL +P ++ QAS+I G+TPAA++LLL+Y Sbjct: 366 IARLRRYETASLPTDMDYTQVKGLSAEVCQKLMAHRPTSVGQASRIPGVTPAAISLLLVY 425 Query: 613 IKK 615 KK Sbjct: 426 FKK 428 >gi|163785117|ref|ZP_02179822.1| glucose-inhibited division protein A [Hydrogenivirga sp. 128-5-R1-1] gi|159879615|gb|EDP73414.1| glucose-inhibited division protein A [Hydrogenivirga sp. 128-5-R1-1] Length = 376 Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust. Identities = 185/372 (49%), Positives = 241/372 (64%), Gaps = 10/372 (2%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 + +DV+VIGGGHAG EAA +AKLG TALIT +G M CNPAIGG+ KG +VREI Sbjct: 4 DTDFDVVVIGGGHAGIEAALASAKLGVKTALITLDKEKVGLMPCNPAIGGIAKGIVVREI 63 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DA G MG+ D G+Q+++LN +KGPAV+ PR QAD+E YR M + + ENL VI+G Sbjct: 64 DAFGGEMGKAIDTTGLQYKMLNTRKGPAVQSPRAQADKEEYRKYMVNKTQNTENLTVIEG 123 Query: 123 EVAG--FNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 E N + + + N I+ +VV+TTGTFL GVIHIG + PAGRM + P+ Sbjct: 124 EATNIFLKPYSNEVEGVEIDGNIKIKAKSVVVTTGTFLDGVIHIGDKQFPAGRMDEKPAQ 183 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI------- 233 L + + + F R KTGTPARLD TI W E+ DE FSF T+ + Sbjct: 184 KLPDFYKEHGFPLVRFKTGTPARLDKNTINWSILEEALGDEPPPKFSFWTEPVGSYWFKE 243 Query: 234 -TNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQ 292 Q+ C IT T ETH+II +N+ +A+Y G I GPRYCPSIEDKIV+F + H Sbjct: 244 GQKEQVSCYITYTTEETHKIIRKNLHRTALYGGAITGVGPRYCPSIEDKIVKFENKARHT 303 Query: 293 IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF 352 ++LEPE + +YPNG+ST+LPEE+Q Q R+IPGLE V +++P YAIEYD + P EL+ Sbjct: 304 VWLEPETRDGISIYPNGLSTSLPEEVQWQMYRSIPGLENVVLLKPAYAIEYDVVPPTELY 363 Query: 353 PTLETKKISGLF 364 PTLETKK+ GL+ Sbjct: 364 PTLETKKVRGLY 375 >gi|315045095|ref|XP_003171923.1| hypothetical protein MGYG_06467 [Arthroderma gypseum CBS 118893] gi|311344266|gb|EFR03469.1| hypothetical protein MGYG_06467 [Arthroderma gypseum CBS 118893] Length = 557 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 220/582 (37%), Positives = 312/582 (53%), Gaps = 77/582 (13%) Query: 58 LVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENL 117 ++REIDALDG+ GR D AGIQFR+LN KGPAV GPR Q DR LYR M E+ + L Sbjct: 1 MIREIDALDGVAGRTVDKAGIQFRILNRSKGPAVWGPRAQIDRALYRKYMLEELTNTPGL 60 Query: 118 DVIQGEVA----------GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKL 167 +++G+VA N + I + ++ +I V++TTGTFL G IHIG Sbjct: 61 SIVEGKVADIVVSKENVANLNGSQGEIVGVRLESGEVIPTGKVIITTGTFLGGEIHIGLD 120 Query: 168 KIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFS 227 P+GRMG++ + L S + F GRLKTGTP RLD KTI + E Q D PFS Sbjct: 121 AFPSGRMGEAATFGLSKSLREAGFQLGRLKTGTPPRLDRKTIDFSTLEIQPGDSPPSPFS 180 Query: 228 FMT------DKITNRQIECGITRTNLE-THRIIMENIKHSAIYSGDIKSYGPRYCPSIED 280 ++ DK+ + + RT T R + I S +K+Y Sbjct: 181 YLNDSVQIGDKVQGQAETYDLVRTGRPCTKRCDLSGPNFGIITSVVMKAYP--------- 231 Query: 281 KIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYA 340 +EP GL + ++ PGY Sbjct: 232 --------------VEPTGL-------------------YAWLGA-----------PGYG 247 Query: 341 IEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCIC 400 +EYDY++P+ L PTLETK ISGL+LAGQINGTTGYEEAAAQG++AGIN+ S + Sbjct: 248 VEYDYVDPRSLRPTLETKLISGLYLAGQINGTTGYEEAAAQGILAGINAGLASQSKPPMT 307 Query: 401 FSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR 460 SR D +IG+MIDDL +KGV EPYRMFT+R+EYRIS R DNAD RLT G G + ++R Sbjct: 308 LSRADGFIGIMIDDLITKGVSEPYRMFTTRSEYRISTRSDNADMRLTAKGRAAGVVSDKR 367 Query: 461 QKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNL-- 518 ++F + ++ ++L++LL++ S + + D R+A+E LS+ S+ ++ Sbjct: 368 WRQFGEVREQMSYLQALLENTRHPSTVWARKGFPVRTDSSVRSAFELLSHNGVSLDDIIP 427 Query: 519 -FSICPDA----RKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSL 573 P + FS + R+ IE YA YT RQ A + +E L+P D DYS++ Sbjct: 428 HIDSTPGSPHSLSSFSPQIKSRMAIEGRYAPYTKRQEASALLFERDEGMLLPPDIDYSTM 487 Query: 574 PALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 LS E ++ L ++P ++ A ++EG+TP LL++++K Sbjct: 488 LGLSTEERQVLEKVRPVSIGMARRVEGVTPVGALKLLMHVRK 529 >gi|213024279|ref|ZP_03338726.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 381 Score = 365 bits (938), Expect = 9e-99, Method: Compositional matrix adjust. Identities = 183/377 (48%), Positives = 244/377 (64%), Gaps = 1/377 (0%) Query: 119 VIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSP 178 + Q V E + + V Q R VVLT GTFL G IHIG GR GD P Sbjct: 1 IFQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPP 60 Query: 179 SNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQ 237 S L + RLKTGTP R+D +TI + +Q D + FSFM + + +Q Sbjct: 61 SIPLSRRLRELPLRVSRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNAFQHPQQ 120 Query: 238 IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 + C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEP Sbjct: 121 VPCYITHTNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQIFLEP 180 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EGL ++ +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+ Sbjct: 181 EGLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLES 240 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 K I GLF AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + Sbjct: 241 KFIHGLFFAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCT 300 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL 477 G EPYRMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R Sbjct: 301 LGTKEPYRMFTSRAEYRLMLREDNADLRLTEMGRELGLVDDERWARFNEKLENIERERQR 360 Query: 478 LKSLVLTSKNLSSTSIS 494 LKS +T S+ ++ Sbjct: 361 LKSTWVTPSAESADEVN 377 >gi|190344036|gb|ACE75814.1| protein MTO1 homolog, mitochondrial precursor (predicted) [Sorex araneus] Length = 549 Score = 365 bits (937), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 211/443 (47%), Positives = 287/443 (64%), Gaps = 28/443 (6%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DV+VIGGGHAG EAAA AA+ GA T L+TH+ TIG MSCNP+ GG+GKGHL+RE+DAL Sbjct: 38 FDVLVIGGGHAGSEAAAAAARCGARTLLLTHRVETIGQMSCNPSFGGIGKGHLMREVDAL 97 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGL GRV D +GI ++VLN +KGPAV G R Q DR+LY+ MQ+E+L L V +G V Sbjct: 98 DGLCGRVCDQSGIHYKVLNRRKGPAVWGLRAQIDRKLYKQNMQKELLGTPLLTVQEGAVE 157 Query: 126 GFNTE--------KNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 E K +S +V+ D S + +VVLTTGTFLRG++ IG PAGR+GD Sbjct: 158 DLILEEAEPGHPGKCRVSGVVLVDGSAVYADSVVLTTGTFLRGMVVIGLETHPAGRLGDQ 217 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR- 236 PS L + K F GRLKTGTP R+ ++I + KQ D PFSF+ + + + Sbjct: 218 PSIGLAQTLEKLGFMVGRLKTGTPPRIAKESINFSILNKQEPDNPSTPFSFINETVWIKP 277 Query: 237 --QIECGITRTNLETHRIIMENIKHSAIYSGDIK--SYGPRYCPSIEDKIVRFGERNGHQ 292 Q+ C +T TN + I++EN+ + IK + GPRYCPSIE K++RF R HQ Sbjct: 278 EDQLPCYLTHTNPKVDEIVLENLH----LNSHIKETTRGPRYCPSIESKVLRFPNRL-HQ 332 Query: 293 IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF 352 ++LEPEGL++D++YP G+S LP E+Q + I I GLEK +++PGY ++YDY++P+++ Sbjct: 333 VWLEPEGLDSDLIYPQGLSVTLPAELQEKIITCIRGLEKAKMVQPGYGVQYDYLDPRQIS 392 Query: 353 PTLETKKISGLFLAGQINGTTGYEEAAAQG--LVAGINSARKSNKLDCICFSRTDSYIGV 410 P+LET + LF AGQINGTTGYEEAAAQ +AG + K K +C S S + V Sbjct: 393 PSLETHLVQRLFFAGQINGTTGYEEAAAQSPPCIAGCDPKSKQTKQKQLCLS---SALDV 449 Query: 411 M----ID-DLTSKGVLEPYRMFT 428 + +D +L +K V EP + +T Sbjct: 450 LKYEEVDMELLAKAVPEPLKKYT 472 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 31/103 (30%), Positives = 60/103 (58%), Gaps = 5/103 (4%) Query: 503 TAYEFLSYPDFSIQNLFSICPDA-RKFSSL--VIERLQIESSYAAYTGRQMIEAKEIKFE 559 +A + L Y + ++ L P+ +K++ + ERL+IE++Y + Q E KE++ + Sbjct: 445 SALDVLKYEEVDMELLAKAVPEPLKKYTGCRELAERLKIEATYESVLLHQQQEIKEVQRD 504 Query: 560 EKRLIPKDFDYSSLP--ALSNELKEKLSILKPFNLLQASKIEG 600 E +P+D DY +L +LS+E++EKL + +P A+++ G Sbjct: 505 EALQLPRDLDYLTLRDISLSDEVREKLHLSRPQTQSSANQVSG 547 >gi|308804834|ref|XP_003079729.1| glucose inhibited division protein A (ISS) [Ostreococcus tauri] gi|116058186|emb|CAL53375.1| glucose inhibited division protein A (ISS) [Ostreococcus tauri] Length = 595 Score = 365 bits (937), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 211/470 (44%), Positives = 276/470 (58%), Gaps = 25/470 (5%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAA +A++GA T L+T + CNPA+GG K LV EIDAL Sbjct: 57 YDVIVVGAGHAGCEAALASARVGAKTLLLTLSLDRVAWQPCNPAVGGPAKSQLVHEIDAL 116 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG ++D +Q RVLN +GPAV R Q D+ Y M+ + +ENL + +G V Sbjct: 117 GGAMGIISDKTYVQKRVLNASRGPAVWALRAQTDKYEYSREMRATLEKEENLSIREGMVT 176 Query: 126 GFNTEKNI-ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 N + +V VVLTTGTF+ G I +G+ + AGR G++PS L Sbjct: 177 ELLLGNNDDVRGVVTHFGMEFEAKAVVLTTGTFMNGQIWVGRKTLAAGRAGEAPSEGLTE 236 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 F+ RLKTGTPAR+D +TI + E+Q DE + FSF R Sbjct: 237 YLQTLGFEVDRLKTGTPARVDTRTIDYTNLEEQPGDEDVRWFSF--------------DR 282 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIE---DKIVRFGERNGHQIFLEPEGLN 301 R I+ + H A GD ++ + + DK+ + HQIFLEPEG + Sbjct: 283 GRARGARAIV--LPHDANNGGDAQTDRRESIGNADVRWDKLCACRQGESHQIFLEPEGRS 340 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T VY G ST LPE++Q + +RT+PGLE V I+RP YA+EYD++ + PTLETKKIS Sbjct: 341 TPEVYVQGFSTGLPEKLQLELLRTLPGLENVKILRPAYAVEYDFLPAYQCKPTLETKKIS 400 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSAR-----KSNKLDCICFSRTDSYIGVMIDDLT 416 GLF +GQINGTTGYEEAAAQGL+AG N+A+ N + F R SY+G +IDDL Sbjct: 401 GLFFSGQINGTTGYEEAAAQGLLAGANAAQIAKGGARNGAKELIFPRESSYLGTLIDDLC 460 Query: 417 SKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAK 466 +K + EPYRM TSR+EYR+ LR DNAD RLTP+G + G I + R +F K Sbjct: 461 TKDLREPYRMLTSRSEYRLVLRSDNADMRLTPLGREFGLISDARWAKFEK 510 >gi|297581979|ref|ZP_06943899.1| glucose inhibited division protein A [Vibrio cholerae RC385] gi|297533846|gb|EFH72687.1| glucose inhibited division protein A [Vibrio cholerae RC385] Length = 384 Score = 364 bits (934), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 184/366 (50%), Positives = 238/366 (65%), Gaps = 1/366 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA AA+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHETFDVIVVGGGHAGTEAALAAARTGQRTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRNVLENTPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + I +V Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQAVDDVIVEHDHIRGVVTQMGLKFHAKAVVLTVGTFLGGKIHIGLENYAGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D ++ + E Q D FSFM + + RQI Sbjct: 182 ALAHRLRELPFRVDRLKTGTPPRIDANSVDFSVLEAQHGDNPTPVFSFMGKREHHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +++ HQIF+EPEG Sbjct: 242 CYITHTNERTHDVIRANLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADKDSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTTELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFL 365 I GLFL Sbjct: 362 IHGLFL 367 >gi|254230609|ref|ZP_04923968.1| glucose inhibited division protein A, putative [Vibrio sp. Ex25] gi|151936869|gb|EDN55768.1| glucose inhibited division protein A, putative [Vibrio sp. Ex25] Length = 451 Score = 364 bits (934), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 197/446 (44%), Positives = 274/446 (61%), Gaps = 15/446 (3%) Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D +T+ + E Q D FSFM + + RQI Sbjct: 2 ALADRLRELPFRVDRLKTGTPPRIDARTVDFSVLEAQHGDNPTPVFSFMGKREQHPRQIP 61 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 62 CFITHTNEQTHDVIRSNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 121 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 122 LTTHELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 181 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 182 IHGLFFAGQINGTTGYEEAAAQGLMAGLNASLYSQDKEGWSPRRDQAYMGVLIDDLSTMG 241 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG I R RF + + R LK Sbjct: 242 TKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLIDNVRWARFNEKLNNMETERQRLK 301 Query: 480 SLVLTSKN--------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SS 530 S + K+ L T ++ + G+ + L P+ + L + A Sbjct: 302 STWMNPKSEGVDELNKLLKTPMAREASGE-----DLLRRPEITYSQLTQLEAFAPALEDQ 356 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 E+++I+ Y Y RQ E ++ E +P D DY + LSNE+ KLS KP Sbjct: 357 QAAEQVEIQVKYDGYIKRQQEEIEKSLRHENTKLPADLDYRDVKGLSNEVVAKLSEAKPE 416 Query: 591 NLLQASKIEGMTPAALNLLLIYIKKN 616 ++ AS+I G+TPAA+++LL+++KK+ Sbjct: 417 SIGIASRISGITPAAISILLVHLKKH 442 >gi|229087971|ref|ZP_04220078.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus Rock3-44] gi|228695340|gb|EEL48218.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus Rock3-44] Length = 395 Score = 347 bits (891), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 179/356 (50%), Positives = 231/356 (64%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLCQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ ++ Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEDDVCRGVITQSGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + + R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGLELVRFKTGTPPRVNSSTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I N+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSEETHRLIDRNLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 VY G+ST+LPE++Q + ++TIPGLE V ++R GYAIEYD I P +L+PTLETKK+ Sbjct: 307 VYVQGLSTSLPEDVQREMLKTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKL 362 >gi|46205292|ref|ZP_00048731.2| COG0445: NAD/FAD-utilizing enzyme apparently involved in cell division [Magnetospirillum magnetotacticum MS-1] Length = 281 Score = 347 bits (890), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 161/281 (57%), Positives = 204/281 (72%) Query: 59 VREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLD 118 +REIDALDGLMGRV D AGIQFR+LN KGPAV+GPR QADR+LYRLAM+ + E L Sbjct: 1 MREIDALDGLMGRVIDRAGIQFRILNRSKGPAVQGPRAQADRKLYRLAMRAALDETETLT 60 Query: 119 VIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSP 178 +++G E ++ +V+ D S + C VV+TTGTFLRG+IH+G+ PAGR+GD+P Sbjct: 61 LLEGSAEDLVIEDGRVAGVVLADGSTLTCGAVVITTGTFLRGLIHLGEKTWPAGRVGDAP 120 Query: 179 SNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQI 238 S L + + GRLKTGTPARLDG+TI W+ ++Q D+ +PFS++T IT Q+ Sbjct: 121 SLGLSLALERAGLPLGRLKTGTPARLDGRTIDWESLDRQDGDDPPVPFSYLTHSITTPQV 180 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 CGIT T ETH II N++ + +YSG I+S GPRYCPSIEDK+VRF +R HQIFLEPE Sbjct: 181 ACGITATTPETHAIIRANLERAPMYSGQIQSTGPRYCPSIEDKVVRFADRERHQIFLEPE 240 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGY 339 GL+ D VYPNGIST+LPE++Q I TIPGLE +IRPGY Sbjct: 241 GLDDDTVYPNGISTSLPEDVQRAMIATIPGLEHCRVIRPGY 281 >gi|116334904|ref|YP_802399.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Candidatus Carsonella ruddii PV] gi|123320796|sp|Q05FY8|MNMG_CARRP RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|116235185|dbj|BAF35033.1| glucose inhibited division protein A [Candidatus Carsonella ruddii PV] Length = 500 Score = 346 bits (887), Expect = 8e-93, Method: Compositional matrix adjust. Identities = 193/476 (40%), Positives = 289/476 (60%), Gaps = 15/476 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +++I+IG GH+G EAA A+K+ +IT +G MSCNP+IGG+GK HLV+E++ Sbjct: 4 FNIIIIGAGHSGIEAAISASKICNKIKIITSNLENLGIMSCNPSIGGIGKSHLVKELELF 63 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+M +D + I ++LN KKG +V R Q DR LY+ + + + ++N+ + Q E+ Sbjct: 64 GGIMPEASDYSRIHSKLLNYKKGESVHSLRYQIDRILYKNYILKILFLKKNILIEQNEIN 123 Query: 126 G---FNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 F + I + + + + I +++ GTF+ I+IGK I A + + S+ Sbjct: 124 KIIRFKKKILIFNKLKFFNIAKI----IIVCAGTFINSKIYIGK-NIKA--LNKAEKKSI 176 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGI 242 SF K + +LKTGTP RLD + + K Q++D + S+ + N ++C I Sbjct: 177 SYSFKKINLFISKLKTGTPPRLDLNYLNYKKLSVQYSDYTI---SYGKNFNFNNNVKCFI 233 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T T+ + + I +NIK+S++++ KS GPRYCPSIEDKI +F HQIFLEPE + Sbjct: 234 TNTDNKINNFIKKNIKNSSLFNLKFKSIGPRYCPSIEDKIFKFPNNKNHQIFLEPESYFS 293 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +Y NG+S +L IQ + I+ I G++K IIR Y I+YDY +P+ L +L K + Sbjct: 294 KEIYVNGLSNSLSYNIQKKLIKKILGIKKSYIIRYAYNIQYDYFDPRCLKISLNIKFANN 353 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 +FLAGQINGTTGYEEA++QG VAGINSARK KL + +SYIGV++ DLT+ G+ E Sbjct: 354 IFLAGQINGTTGYEEASSQGFVAGINSARKILKLPLWKPKKWNSYIGVLLYDLTNFGIQE 413 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 PYR+FTS+++ R+ LR DNA RL I LGC+ + K + I Y F ++L+ Sbjct: 414 PYRIFTSKSDNRLFLRFDNAIFRLINISYYLGCLPIVKFKYYNSLI--YKFYKNLI 467 >gi|305431781|ref|ZP_07400948.1| glucose inhibited division protein A [Campylobacter coli JV20] gi|304444865|gb|EFM37511.1| glucose inhibited division protein A [Campylobacter coli JV20] Length = 382 Score = 342 bits (878), Expect = 9e-92, Method: Compositional matrix adjust. Identities = 173/361 (47%), Positives = 234/361 (64%), Gaps = 1/361 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EA+A AA++G T L+T IG+ SCNPAIGGL KGHLV+E+DA+ Sbjct: 2 FDVIVIGGGHAGVEASAAAARMGKKTLLLTTLIEQIGAASCNPAIGGLAKGHLVKELDAM 61 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLMG + D AGIQFR+LN KG AVRG R Q D + YR+ + ++L +NL++ Q +V Sbjct: 62 GGLMGEITDEAGIQFRILNESKGVAVRGSRAQIDMDKYRIVARNKLLKLKNLEISQEQVC 121 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + V+LTTGTFL G+IH+G+ K+ AGR+G+ S +L + Sbjct: 122 ELIYENGSVVGVKTNLQNTYEAKKVILTTGTFLNGLIHVGENKLTAGRVGELASVNLGQN 181 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + GRLKTGT R+D K+I +D E Q+ D+ FSF T Q+ C I RT Sbjct: 182 LLSTSLKMGRLKTGTCPRVDAKSIDFDVLEIQYGDQNPKAFSFRTKNFNPIQLPCYIART 241 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N TH II N + +++G I+ GPRYCPSIEDKI RF ++ H +F+EP+ ++ Sbjct: 242 NTTTHEIIKNNFYRAPLFTGQIEGVGPRYCPSIEDKINRFSDKESHHLFIEPQTIDATEY 301 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y NG ST+LP E+Q Q +R++ G E+ I R GYAIEYDYI P EL+ TLETKK+ +F+ Sbjct: 302 YINGFSTSLPYEVQTQMLRSVKGFEEAKITRFGYAIEYDYIEPTELYHTLETKKLK-IFI 360 Query: 366 A 366 A Sbjct: 361 A 361 >gi|48243619|gb|AAT40770.1| putative glucose-inhibited division protein [Haemophilus influenzae] Length = 330 Score = 336 bits (861), Expect = 9e-90, Method: Compositional matrix adjust. Identities = 168/325 (51%), Positives = 215/325 (66%), Gaps = 1/325 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIGGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DA Sbjct: 6 TYDVIVIGGGHAGTEAALAPARMGFKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 + GLM AD AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q E Sbjct: 66 MGGLMAHAADKAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIFQQEA 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E++ ++ + + + R +VVLT GTFL G IHIG GR GD S +L + Sbjct: 126 TDILIEQDRVTGVSTKMGLIFRAKSVVLTAGTFLAGKIHIGLENYEGGRAGDPASVNLSH 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 RLKTGTP R+D +TI +D KQ DE L FSFM + +QI C IT Sbjct: 186 RLRDLGLRVDRLKTGTPPRIDARTINFDILAKQHGDEVLPMFSFMGSVDDHPQQIPCYIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL ++ Sbjct: 246 YTNEQTHEVIRNNLDRSPMYTGVIEGIGPRYCPSIEDKVMRFSDRNSHQIYLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPG 328 VYPNGIST+LP ++Q + ++ G Sbjct: 306 EVYPNGISTSLPFDVQMGIVNSMKG 330 >gi|153827710|ref|ZP_01980377.1| hypothetical protein A5A_2951 [Vibrio cholerae MZO-2] gi|149737813|gb|EDM52718.1| hypothetical protein A5A_2951 [Vibrio cholerae MZO-2] Length = 425 Score = 332 bits (852), Expect = 8e-89, Method: Compositional matrix adjust. Identities = 180/412 (43%), Positives = 254/412 (61%), Gaps = 15/412 (3%) Query: 215 EKQFADERLIPFSFMTDKITN-RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPR 273 E Q D FSFM + + RQI C IT TN TH +I N+ S +Y+G I+ GPR Sbjct: 10 EAQHGDNPTPVFSFMGKREHHPRQIPCYITHTNERTHDVIRANLDRSPMYAGIIEGIGPR 69 Query: 274 YCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVN 333 YCPSIEDK++RF +++ HQIF+EPEGL T +YPNGIST+LP ++Q Q +R++ G E + Sbjct: 70 YCPSIEDKVMRFADKDSHQIFIEPEGLTTTELYPNGISTSLPFDVQVQIVRSMKGFENAH 129 Query: 334 IIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKS 393 I+RPGYAIEYD+ +P++L T ETK I GLF AGQINGTTGYEEAAAQGL+AG+N++ S Sbjct: 130 IVRPGYAIEYDFFDPRDLKQTYETKFIHGLFFAGQINGTTGYEEAAAQGLMAGLNASLYS 189 Query: 394 NKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKL 453 + R +Y+GV+IDDL++ G EPYRMFTSRAEYR+ LR DNAD RLT +L Sbjct: 190 QDKEGWSPRRDQAYMGVLIDDLSTMGTKEPYRMFTSRAEYRLLLREDNADLRLTEKAREL 249 Query: 454 GCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKN--------LSSTSISFKQDGKTRTAY 505 G + + R RF + I R L+ + + L T +S + G+ Sbjct: 250 GLVDDARWARFNQKIDNMAKERQRLQETWMNPNSVGVEQLNTLLKTPMSREASGE----- 304 Query: 506 EFLSYPDFSIQNLFSICPDARKFSSL-VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLI 564 + L P+ + + L ++ A E+++I+ Y Y RQ E ++ E + Sbjct: 305 DLLRRPEMTYELLTTLPAFAPALEDAEAAEQVEIQVKYDGYIQRQQDEIEKSLRHEHTKL 364 Query: 565 PKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKN 616 P + DY + LSNE+ KL+ KP + AS+I G+TPAA+++LL+++KK+ Sbjct: 365 PAELDYKQVKGLSNEVVLKLNAAKPETIGIASRISGITPAAISILLVHLKKH 416 >gi|312095432|ref|XP_003148355.1| glucose inhibited division protein A [Loa loa] gi|307756479|gb|EFO15713.1| glucose inhibited division protein A [Loa loa] Length = 468 Score = 330 bits (845), Expect = 6e-88, Method: Compositional matrix adjust. Identities = 195/469 (41%), Positives = 264/469 (56%), Gaps = 37/469 (7%) Query: 179 SNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT---N 235 ++ L +F + F GR +TGTPARL KTI + K Q D + IPFSF+T+ + + Sbjct: 2 NSKLSETFKRLGFKLGRFRTGTPARLFKKTIDFSKFAPQLPDRKPIPFSFLTEHVWLPHH 61 Query: 236 RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFL 295 +Q+ + TN +I+++ + GPRYCPS+E K++RF N H+IFL Sbjct: 62 QQLPSYLGFTNNRLAEVILKHFNECNYIRSEAN--GPRYCPSLESKVIRFPHLN-HRIFL 118 Query: 296 EPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTL 355 E EGL++D++YP G+S E+Q + R IPGLE V I GY +EYDY+NPK+L TL Sbjct: 119 EHEGLDSDLIYPQGMSMTFAPEVQLEVYRCIPGLENVEISETGYGVEYDYVNPKQLQSTL 178 Query: 356 ETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDL 415 +TK + GLFLAGQINGTTGYEEAAAQG+VAGIN+A + RT+ YIGV+IDDL Sbjct: 179 QTKAVEGLFLAGQINGTTGYEEAAAQGIVAGINAAASTRNKKPFVIDRTEGYIGVLIDDL 238 Query: 416 TSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLR 475 TS G EPYRMFTSRAE R+ LRPDNAD RLT G + G + E R F K + YN R Sbjct: 239 TSLGTSEPYRMFTSRAELRLHLRPDNADIRLTEKGYQHGAVSEHRHNHFLKMVSAYNETR 298 Query: 476 SLLKSLVLTSKNLSSTSISFKQDGKTR---TAYEFLSYPDFSIQNLFSICPD--ARKFSS 530 LLKS V N I ++ +T +A++ L + + P R + Sbjct: 299 DLLKS-VKYPMNFWRKFIPRLENARTTKVYSAFDLLCRYEIDFMEIRKAAPVELERLLEN 357 Query: 531 LVIE-RLQIESSYAAY------------------------TGRQMIEAKEIKFEEKRLIP 565 IE RL+IE+ Y Y R ++ ++I+ E +IP Sbjct: 358 DEIEHRLKIEAFYHFYLDKSLIFTSLVDIQLLKCEHAFLLKSRHFMKIEQIRKECATVIP 417 Query: 566 KDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIK 614 +FDYS L ++S E KE L +P NL AS++ G T AL LL ++K Sbjct: 418 DNFDYSKLNSISAECKENLEFWRPQNLAAASRVPGATTEALIELLNFLK 466 >gi|13272341|gb|AAK17104.1|AF291051_1 cell division protein [Candidatus Carsonella ruddii] Length = 485 Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 187/463 (40%), Positives = 278/463 (60%), Gaps = 15/463 (3%) Query: 19 EAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGI 78 EAA A+K+ +IT +G MSCNP+IGG+GK HLV+E++ G+M +D + I Sbjct: 2 EAAISASKICNKIKIITSNLENLGIMSCNPSIGGIGKSHLVKELELFGGIMPEASDYSRI 61 Query: 79 QFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAG---FNTEKNIIS 135 ++LN KKG +V R Q DR LY+ + + + ++N+ + Q E+ F + I + Sbjct: 62 HSKLLNYKKGESVHSLRYQIDRILYKNYILKILFLKKNILIEQNEINKIIRFKKKILIFN 121 Query: 136 SIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGR 195 + + + I +++ GTF+ I+IGK I A + + S+ SF K + + Sbjct: 122 KLKFFNIAKI----IIVCAGTFINSKIYIGK-NIKA--LNKAEKKSISYSFKKINLFISK 174 Query: 196 LKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTNLETHRIIME 255 LKTGTP RLD + + K Q++D + S+ + N ++C IT T+ + + I + Sbjct: 175 LKTGTPPRLDLNYLNYKKLSVQYSDYTI---SYGKNFNFNNNVKCFITNTDNKINNFIKK 231 Query: 256 NIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALP 315 NIK+S++++ KS GPRYCPSIEDKI +F HQIFLEPE + +Y NG+S +L Sbjct: 232 NIKNSSLFNLKFKSIGPRYCPSIEDKIFKFPNNKNHQIFLEPESYFSKEIYVNGLSNSLS 291 Query: 316 EEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGY 375 IQ + I+ I G++K IIR Y I+YDY +P+ L +L K + +FLAGQINGTTGY Sbjct: 292 YNIQKKLIKKILGIKKSYIIRYAYNIQYDYFDPRCLKISLNIKFANNIFLAGQINGTTGY 351 Query: 376 EEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRI 435 EEA++QG VAGINSARK KL + +SYIGV++ DLT+ G+ EPYR+FTS+++ R+ Sbjct: 352 EEASSQGFVAGINSARKILKLPLWKPKKWNSYIGVLLYDLTNFGIQEPYRIFTSKSDNRL 411 Query: 436 SLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 LR DNA RL I LGC+ + K + I Y F ++L+ Sbjct: 412 FLRFDNAIFRLINISYYLGCLPIVKFKYYNSLI--YKFYKNLI 452 >gi|296088516|emb|CBI37507.3| unnamed protein product [Vitis vinifera] Length = 852 Score = 324 bits (830), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 170/400 (42%), Positives = 251/400 (62%), Gaps = 3/400 (0%) Query: 226 FSFMTD-KITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVR 284 FSF D I Q+ C +TRT TH++I EN+ + Y G +++ GPRYCPSIEDKIVR Sbjct: 387 FSFDPDFHIEREQMCCYLTRTTKSTHQLIKENLHETPTYGGWVEAKGPRYCPSIEDKIVR 446 Query: 285 FGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYD 344 F ++ HQIFLEPEG N +Y G ST LPE +Q +RT+PGLE +++RP YA+EYD Sbjct: 447 FQDKESHQIFLEPEGRNVPELYVQGFSTGLPERLQLPLLRTLPGLENCSMLRPAYAVEYD 506 Query: 345 YINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 ++ + +L TK+I GLF +GQINGTTGYEEAAAQGL++GIN+AR S+ I R Sbjct: 507 FLPAYQCSRSLMTKQIEGLFFSGQINGTTGYEEAAAQGLISGINAARYSDGKSLIVLERE 566 Query: 405 DSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRF 464 SYIG +IDDL +K + EPYRM TSR+E+R+ LR DNAD+RLTP+G ++G I +RR K + Sbjct: 567 SSYIGTLIDDLVTKDLREPYRMLTSRSEHRLLLRSDNADSRLTPLGREIGLIDDRRWKIY 626 Query: 465 AKYIQEYNFLRSLLKSLVLTSKNLSS--TSISFKQDGKTRTAYEFLSYPDFSIQNLFSIC 522 + + + L+++ ++ +L+S T +S + + T L P + L Sbjct: 627 QDKQAQISQEKKRLRTVRISGGDLASDVTHLSGQPVKDSSTLESILKKPHVQYKVLDKHG 686 Query: 523 PDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKE 582 S + E ++I+ Y + RQ + +++ ++ R +P+D DY ++ LS E +E Sbjct: 687 FGNELLSKIEKECVEIDIKYEGFIMRQQSQLQQMARQQHRPLPEDLDYYAMTTLSLEARE 746 Query: 583 KLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVKLNE 622 KLS ++P + QAS++ G++PA + LLI ++ N K E Sbjct: 747 KLSKIRPQTIGQASRVGGVSPADITALLIILETNRRKAQE 786 Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 76/182 (41%), Positives = 104/182 (57%), Gaps = 18/182 (9%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 N YDVIV+GGGHAGCEAA +A+LGA T L+T I CNPA+GG K LV E+ Sbjct: 71 NERYDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDRIAWQPCNPAVGGPAKSQLVHEV 130 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G +G+VAD +Q RVLN+ +GPAVR R Q D+ Y L M+ N+ Q Sbjct: 131 DALGGEIGKVADRCYLQKRVLNISRGPAVRALRAQTDKRDYALQMK-------NIVERQA 183 Query: 123 EVAGFNTEKNIISSIVMQDNSMIR-----------CSTVVLTTGTFLRGVIHIGKLKIPA 171 + + +++ I++ N + +V+LTTGTF+ G I +G+ +PA Sbjct: 184 YCPNLSIREAMVTDILLGKNDNVEGVRTFFGMDFYAPSVILTTGTFMSGKIWVGRTSMPA 243 Query: 172 GR 173 GR Sbjct: 244 GR 245 >gi|313897026|ref|ZP_07830573.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Selenomonas sp. oral taxon 137 str. F0430] gi|312974473|gb|EFR39941.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Selenomonas sp. oral taxon 137 str. F0430] Length = 397 Score = 320 bits (820), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 166/392 (42%), Positives = 248/392 (63%), Gaps = 3/392 (0%) Query: 229 MTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGER 288 MT+++ Q+ C +T TN TH +I N+ + + +G I+ GPRYCPS+E KI RF ++ Sbjct: 1 MTEEMPKEQVRCWLTYTNAATHEVIRVNLHRAPMANGVIEGIGPRYCPSVETKIARFPDK 60 Query: 289 NGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINP 348 HQ+FLEPEGL+T+ +Y G+ST+LP ++Q +F+RTI GLE I+RPGYAIEYD +P Sbjct: 61 ERHQLFLEPEGLHTNELYVQGMSTSLPTDVQEEFLRTIAGLEHARIMRPGYAIEYDCFDP 120 Query: 349 KELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYI 408 L P+L K ++GL+ GQ NGT+GYEEAAAQGL+AGIN+AR+ + + R+D YI Sbjct: 121 LGLEPSLAVKGVAGLYSCGQANGTSGYEEAAAQGLIAGINAAREIAGEEPLILGRSDGYI 180 Query: 409 GVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYI 468 GV+IDDL +KG EPYRM TSRAEYR+ LR DNAD RLTP+G ++G + + R +F Sbjct: 181 GVLIDDLVTKGTEEPYRMMTSRAEYRLILRQDNADLRLTPVGHEIGLVSDARWAKFTAKR 240 Query: 469 QEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEF--LSYPDFSIQNLFSICPDAR 526 LL++ LT + ++ RT L + S L I D Sbjct: 241 DAIEAALHLLETTKLTPDAATEGRLADAGLLPLRTPMNLAALLRREGSYDVLARIF-DLP 299 Query: 527 KFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSI 586 + V E ++I Y Y +Q + ++ E+R IP++ DY+++ +L E +EKL+ Sbjct: 300 ILADDVKEEVEITVRYDGYIRKQREQIARMERLERRRIPEEIDYAAITSLRLEAQEKLAA 359 Query: 587 LKPFNLLQASKIEGMTPAALNLLLIYIKKNTV 618 ++P ++ QAS+I G++PA +++LL+Y++K T+ Sbjct: 360 VRPHSIGQASRISGVSPADVSVLLVYLEKLTL 391 >gi|164663473|ref|XP_001732858.1| hypothetical protein MGL_0633 [Malassezia globosa CBS 7966] gi|159106761|gb|EDP45644.1| hypothetical protein MGL_0633 [Malassezia globosa CBS 7966] Length = 411 Score = 315 bits (808), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 160/385 (41%), Positives = 235/385 (61%), Gaps = 18/385 (4%) Query: 237 QIECGITRTNLETHRIIMENIKHSAIYSGD----IKSYGPRYCPSIEDKIVRFGERNGHQ 292 Q+ C TRT TH I+ + ++ GD K GPRYCPS+E K++RF + H Sbjct: 18 QLYCFGTRTTPATHVIVHQEVQ------GDDYEMTKYTGPRYCPSLEVKVLRFAHKESHP 71 Query: 293 IFLEPEGLNT------DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI 346 ++LEPEGL T V+YPNG+S +L + Q + +RTIPGLE ++RPGYA+EYD++ Sbjct: 72 VWLEPEGLTTTPQRDGHVLYPNGLSCSLSPDAQTRMVRTIPGLEHAVLLRPGYAVEYDHV 131 Query: 347 NPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDS 406 +P+EL PTLET++I GL +AGQINGTTGYEEA QG++AG+N+ ++ K + SR+D Sbjct: 132 DPRELLPTLETRRIRGLAMAGQINGTTGYEEAGVQGVLAGLNAGLRAQKRRELTVSRSDG 191 Query: 407 YIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPI--GMKLGCIGERRQKRF 464 ++GVM+DDL +GV+EPYRMFTSR+EYR+SLR DNAD RLTP+ + I + R Sbjct: 192 FVGVMLDDLRLQGVMEPYRMFTSRSEYRLSLRADNADLRLTPLVHAVSPESITDTRLAAL 251 Query: 465 AKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPD 524 + + +F L +TS+ +S D +T +A + + P IQ+L P+ Sbjct: 252 ERVRADLDFGMQCLARTKMTSRAWASHGFQAADDVRTLSALDMMHRPHARIQDLIPFVPE 311 Query: 525 ARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKL 584 R +ERL ++SY RQ + + + +E +P D ++ L +S+E+KE+ Sbjct: 312 LRGLHPHTLERLATQASYMPLLERQASDIEAFQRDEALALPVDMAFAELQGVSDEMKERF 371 Query: 585 SILKPFNLLQASKIEGMTPAALNLL 609 S +KP L +A +I G TPAA +L Sbjct: 372 SCVKPRTLGEAKRIAGCTPAAYAVL 396 >gi|157695028|gb|ABV66103.1| glucose inhibited division protein A [Rickettsiella melolonthae] Length = 319 Score = 315 bits (808), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 164/320 (51%), Positives = 208/320 (65%), Gaps = 3/320 (0%) Query: 53 LGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREIL 112 +GK HLV+E+DAL G+M AD AGIQ+R LN KGPAVR R Q DR LY+ A+++ + Sbjct: 1 IGKSHLVKEVDALGGIMAHAADLAGIQWRTLNASKGPAVRATRAQMDRSLYKQAIRKTLE 60 Query: 113 SQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAG 172 +Q NL + Q V + N I +V Q +VVLT GTFL G IHIG + G Sbjct: 61 NQANLFIFQQSVDDVILQSNRIVGVVTQMGLRFYAKSVVLTAGTFLAGKIHIGLQQAQGG 120 Query: 173 RMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK 232 R GD +N L + RLKTGTP RLDG++I ++ +Q +D L FS++ K Sbjct: 121 RAGDPEANFLAEKLRQLPLRIKRLKTGTPPRLDGRSINFEVLLEQSSDNPLPVFSYL-GK 179 Query: 233 ITNR--QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNG 290 I QI C IT TN +TH II + S IYSG I GPRYCPSIEDK+VRF ++ Sbjct: 180 IEQHPTQISCFITYTNEKTHAIIRSGLDRSPIYSGVIDGIGPRYCPSIEDKVVRFADKLS 239 Query: 291 HQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKE 350 HQIFLEPEGLNT VYPNGIST+LP +IQ I +I GLE+ +I RPGYAIEYD+ +P++ Sbjct: 240 HQIFLEPEGLNTHEVYPNGISTSLPFDIQCDLIHSIKGLEQAHITRPGYAIEYDFFDPRD 299 Query: 351 LFPTLETKKISGLFLAGQIN 370 LFP+LE++ + LFLAGQIN Sbjct: 300 LFPSLESRLLENLFLAGQIN 319 >gi|18920702|gb|AAL82394.1|AF469110_1 MTO1 isoform 1 [Homo sapiens] Length = 595 Score = 309 bits (792), Expect = 8e-82, Method: Compositional matrix adjust. Identities = 167/388 (43%), Positives = 252/388 (64%), Gaps = 14/388 (3%) Query: 237 QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLE 296 Q+ C +T TN I+++N++ ++ + GPRYCPSIE K++RF R HQ++LE Sbjct: 182 QLPCYLTHTNPRVDEIVLKNLQLNSHVKETTR--GPRYCPSIESKVLRFPNRL-HQVWLE 238 Query: 297 PEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLE 356 PEG+++D++YP G+S LP E+Q + I I GLEK +I+PGY ++YDY++P+++ P+LE Sbjct: 239 PEGMDSDLIYPQGLSMTLPAELQEKMITCIRGLEKAKVIQPGYGVQYDYLDPRQITPSLE 298 Query: 357 TKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 T + LF AGQINGTTGYEEAAAQG++AGIN++ + ++ SRT+ YIGV+IDDLT Sbjct: 299 THLVQRLFFAGQINGTTGYEEAAAQGVIAGINASLRVSRKPPFVVSRTEGYIGVLIDDLT 358 Query: 417 SKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMK-LGCIGERRQKRFAKYIQEYNFLR 475 + G EPYRMFTSR E+R+SLRPDNAD+RLT G K GC+ ++R +R Sbjct: 359 TLGTSEPYRMFTSRVEFRLSLRPDNADSRLTLRGYKDAGCVSQQRYERACWMKSSLEEGI 418 Query: 476 SLLKSLVLTS----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA-RKFSS 530 S+LKS+ S K + SIS + R A + L Y + + +L P+ +K++ Sbjct: 419 SVLKSIEFLSSKWKKLIPEASISTSRSLPVR-ALDVLKYEEVDMDSLAKAVPEPLKKYTK 477 Query: 531 L--VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLP--ALSNELKEKLSI 586 + ERL+IE++Y + Q+ E K ++ +E +PKD DY ++ +LS+E++EKL Sbjct: 478 CRELAERLKIEATYESVLFHQLQEIKGVQQDEALQLPKDLDYLTIRDVSLSHEVREKLHF 537 Query: 587 LKPFNLLQASKIEGMTPAALNLLLIYIK 614 +P + AS+I G+TPAA+ LL ++K Sbjct: 538 SRPQTIGAASRIPGVTPAAIINLLRFVK 565 Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 75/147 (51%), Positives = 102/147 (69%), Gaps = 8/147 (5%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA+ G+ T L+TH+ TIG MSCNP+ GG+GKGHL+RE+DAL Sbjct: 37 FDVIVIGGGHAGTEAATAAARCGSRTLLLTHRVDTIGQMSCNPSFGGIGKGHLMREVDAL 96 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGL R+ D +G+ ++VLN +KGPAV G R Q DR+LY+ MQ+EIL+ L V +G V Sbjct: 97 DGLCSRICDQSGVHYKVLNRRKGPAVWGLRAQIDRKLYKQNMQKEILNTPLLTVQEGAVE 156 Query: 126 GF--------NTEKNIISSIVMQDNSM 144 +T K +S +V+ ++ + Sbjct: 157 DLILTEPEPEHTGKCRVSGVVLPEDQL 183 >gi|119569145|gb|EAW48760.1| mitochondrial translation optimization 1 homolog (S. cerevisiae), isoform CRA_a [Homo sapiens] Length = 594 Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 167/388 (43%), Positives = 251/388 (64%), Gaps = 14/388 (3%) Query: 237 QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLE 296 Q+ C +T TN I+++N+ ++ + GPRYCPSIE K++RF R HQ++LE Sbjct: 181 QLPCYLTHTNPRVDEIVLKNLHLNSHVKETTR--GPRYCPSIESKVLRFPNRL-HQVWLE 237 Query: 297 PEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLE 356 PEG+++D++YP G+S LP E+Q + I I GLEK +I+PGY ++YDY++P+++ P+LE Sbjct: 238 PEGMDSDLIYPQGLSMTLPAELQEKMITCIRGLEKAKVIQPGYGVQYDYLDPRQITPSLE 297 Query: 357 TKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 T + LF AGQINGTTGYEEAAAQG++AGIN++ + ++ SRT+ YIGV+IDDLT Sbjct: 298 THLVQRLFFAGQINGTTGYEEAAAQGVIAGINASLRVSRKPPFVVSRTEGYIGVLIDDLT 357 Query: 417 SKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMK-LGCIGERRQKRFAKYIQEYNFLR 475 + G EPYRMFTSR E+R+SLRPDNAD+RLT G K GC+ ++R +R Sbjct: 358 TLGTSEPYRMFTSRVEFRLSLRPDNADSRLTLRGYKDAGCVSQQRYERACWMKSSLEEGI 417 Query: 476 SLLKSLVLTS----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA-RKFSS 530 S+LKS+ S K + SIS + R A + L Y + + +L P+ +K++ Sbjct: 418 SVLKSIEFLSSKWKKLIPEASISTSRSLPVR-ALDVLKYEEVDMDSLAKAVPEPLKKYTK 476 Query: 531 L--VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLP--ALSNELKEKLSI 586 + ERL+IE++Y + Q+ E K ++ +E +PKD DY ++ +LS+E++EKL Sbjct: 477 CRELAERLKIEATYESVLFHQLQEIKGVQQDEALQLPKDLDYLTIRDVSLSHEVREKLHF 536 Query: 587 LKPFNLLQASKIEGMTPAALNLLLIYIK 614 +P + AS+I G+TPAA+ LL ++K Sbjct: 537 SRPQTIGAASRIPGVTPAAIINLLRFVK 564 Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 76/145 (52%), Positives = 101/145 (69%), Gaps = 8/145 (5%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA+ G+ T L+TH+ TIG MSCNP+ GG+GKGHL+RE+DAL Sbjct: 37 FDVIVIGGGHAGTEAATAAARCGSRTLLLTHRVDTIGQMSCNPSFGGIGKGHLMREVDAL 96 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGL R+ D +G+ ++VLN +KGPAV G R Q DR+LY+ MQ+EIL+ L V +G V Sbjct: 97 DGLCSRICDQSGVHYKVLNRRKGPAVWGLRAQIDRKLYKQNMQKEILNTPLLTVQEGAVE 156 Query: 126 GF--------NTEKNIISSIVMQDN 142 +T K +S +V++D Sbjct: 157 DLILTEPEPEHTGKCRVSGVVLEDQ 181 >gi|332824610|ref|XP_003311452.1| PREDICTED: protein MTO1 homolog, mitochondrial isoform 3 [Pan troglodytes] Length = 595 Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 167/388 (43%), Positives = 251/388 (64%), Gaps = 14/388 (3%) Query: 237 QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLE 296 Q+ C +T TN I+++N+ ++ + GPRYCPSIE K++RF R HQ++LE Sbjct: 182 QLPCYLTHTNPRVDEIVLKNLHLNSHVKETTR--GPRYCPSIESKVLRFPNRL-HQVWLE 238 Query: 297 PEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLE 356 PEG+++D++YP G+S LP E+Q + I I GLEK +I+PGY ++YDY++P+++ P+LE Sbjct: 239 PEGMDSDLIYPQGLSMTLPAELQEKMITCIRGLEKAKVIQPGYGVQYDYLDPRQITPSLE 298 Query: 357 TKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 T + LF AGQINGTTGYEEAAAQG++AGIN++ + ++ SRT+ YIGV+IDDLT Sbjct: 299 THLVQRLFFAGQINGTTGYEEAAAQGVIAGINASLRVSRKPPFVVSRTEGYIGVLIDDLT 358 Query: 417 SKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMK-LGCIGERRQKRFAKYIQEYNFLR 475 + G EPYRMFTSR E+R+SLRPDNAD+RLT G K GC+ ++R +R Sbjct: 359 TLGTSEPYRMFTSRVEFRLSLRPDNADSRLTLRGYKDAGCVSQQRYERACWMKSSLEEGI 418 Query: 476 SLLKSLVLTS----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA-RKFSS 530 S+LKS+ S K + SIS + R A + L Y + + +L P+ +K++ Sbjct: 419 SVLKSIEFLSSKWKKLIPEASISTSRSLPVR-ALDVLKYEEVDMDSLAKAVPEPLKKYTK 477 Query: 531 L--VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLP--ALSNELKEKLSI 586 + ERL+IE++Y + Q+ E K ++ +E +PKD DY ++ +LS+E++EKL Sbjct: 478 CRELAERLKIEATYESVLFHQLQEIKGVQQDEALQLPKDLDYLTIRDVSLSHEVREKLHF 537 Query: 587 LKPFNLLQASKIEGMTPAALNLLLIYIK 614 +P + AS+I G+TPAA+ LL ++K Sbjct: 538 SRPQTIGAASRIPGVTPAAIINLLRFVK 565 Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 75/147 (51%), Positives = 102/147 (69%), Gaps = 8/147 (5%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA+ G+ T L+TH+ TIG MSCNP+ GG+GKGHL+RE+DAL Sbjct: 37 FDVIVIGGGHAGTEAATAAARCGSRTLLLTHRVDTIGQMSCNPSFGGIGKGHLMREVDAL 96 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGL R+ D +G+ ++VLN +KGPAV G R Q DR+LY+ MQ+EIL+ L V +G V Sbjct: 97 DGLCSRICDQSGVHYKVLNRRKGPAVWGLRAQIDRKLYKQNMQKEILNTPLLTVQEGAVE 156 Query: 126 GF--------NTEKNIISSIVMQDNSM 144 +T K +S +V+ ++ + Sbjct: 157 DLILTEPEPEHTGKCRVSGVVLPEDQL 183 >gi|258626070|ref|ZP_05720921.1| conserved hypothetical protein [Vibrio mimicus VM603] gi|258581596|gb|EEW06494.1| conserved hypothetical protein [Vibrio mimicus VM603] Length = 368 Score = 307 bits (787), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 162/363 (44%), Positives = 229/363 (63%), Gaps = 12/363 (3%) Query: 262 IYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQ 321 +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEGL T +YPNGIST+LP ++Q Q Sbjct: 1 MYAGIIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEGLTTTELYPNGISTSLPFDVQVQ 60 Query: 322 FIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQ 381 +R++ G E +I+RPGYAIEYD+ +P++L T ETK I GLF AGQINGTTGYEEAAAQ Sbjct: 61 IVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKFIHGLFFAGQINGTTGYEEAAAQ 120 Query: 382 GLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDN 441 GL+AG+N++ S + R +Y+GV+IDDL++ G EPYRMFTSRAEYR+ LR DN Sbjct: 121 GLMAGLNASLYSQDKEGWSPRRDQAYMGVLIDDLSTMGTKEPYRMFTSRAEYRLLLREDN 180 Query: 442 ADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKN--------LSSTSI 493 AD RLT +LG + + R RF + I R L+ + + L T + Sbjct: 181 ADLRLTEKARELGLVDDERWARFNQKIDNMAKERQRLQETWMNPNSVGVEQLNALLKTPM 240 Query: 494 SFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEA 553 S + G+ ++Y + +F+ + S E+++I+ Y Y RQ E Sbjct: 241 SREASGEDLLRRPEMTYELLTTLPVFTPALE----DSEAAEQVEIQVKYDGYIQRQQDEI 296 Query: 554 KEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYI 613 ++ E +P D DY + LSNE+ KLS KP + AS+I G+TPAA+++LL+++ Sbjct: 297 EKSLRHEHTKLPVDLDYKQVKGLSNEVVLKLSTTKPETIGIASRISGITPAAISILLVHL 356 Query: 614 KKN 616 KK+ Sbjct: 357 KKH 359 >gi|47219743|emb|CAG12665.1| unnamed protein product [Tetraodon nigroviridis] Length = 438 Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 177/413 (42%), Positives = 248/413 (60%), Gaps = 40/413 (9%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 Y VIV+GGGHAG EAAA AA++GA T L++ K TIG++SCNP++GG+GKG LV+EIDAL Sbjct: 21 YHVIVVGGGHAGTEAAAAAARVGAETLLVSQKIQTIGALSCNPSLGGVGKGQLVKEIDAL 80 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGL GR D AGI F +LN +KGPAV GPR Q DR+ YR +Q E+LS L +++G V Sbjct: 81 DGLCGRAGDWAGIHFSILNRRKGPAVWGPRAQLDRQHYREFIQSELLSTPRLTLLEGSVE 140 Query: 126 GF--------NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 ++ ++ I + + S + S+VVLTTGTFL G + +G+ +P GR+GD+ Sbjct: 141 ELLVTEAKPDEPGQHRVTGIRLANGSQVSASSVVLTTGTFLSGSLFVGQNTMPGGRIGDA 200 Query: 178 PSNSLFNSFM--KFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI-- 233 PS++ + + + TGRL+TGTP R+ +++ D PFSF+ Sbjct: 201 PSSAGLSHTLRERLGLRTGRLRTGTPPRIVKESVDLSLAVLHPPDGTPTPFSFLNKHTRC 260 Query: 234 -TNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQ 292 Q+ C +T T +++ E++ + D K GPRYCPSIE +++RF R HQ Sbjct: 261 KPEEQLPCHLTYTTPGVEKVVKESLHLNCHIQQDTK--GPRYCPSIESRVLRFPGRQ-HQ 317 Query: 293 IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRP--------------- 337 ++LEPEGL ++++YP G+S +P E+Q IR IP L + I P Sbjct: 318 VWLEPEGLTSELLYPQGLSMTMPPEMQLSLIREIPALHRAEIHTPVRCGHSDLMHQSYLN 377 Query: 338 ---------GYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQ 381 GY ++YD++ P +L P L+ K GLFLAGQINGTTGYEEAAAQ Sbjct: 378 LEVSRSALSGYGVQYDFVCPTQLSPALQVKSTQGLFLAGQINGTTGYEEAAAQ 430 >gi|255026480|ref|ZP_05298466.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes FSL J2-003] Length = 344 Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 155/337 (45%), Positives = 208/337 (61%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+G GHAG EA + ++GA T ++T + M CNP++GG KG +VREIDA Sbjct: 8 TFDVIVVGAGHAGVEAGLASGRMGAKTLMLTINLDMVAFMPCNPSVGGPAKGVVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ M+ I +EN+ + QG V Sbjct: 68 LGGEMGRNTDKTYIQMRMLNTGKGPAVRALRAQADKWDYQHEMKHTIEKEENITLRQGLV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ ++ TVV+TTGTF RG I +G+L+ +G PS L Sbjct: 128 DRLVIEDGVCKGVITNSGAIYYAKTVVITTGTFSRGEIIVGELRYSSGPNNQQPSVKLSE 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F+ R KTGTP R+ TI + KTE+Q D+ FSF T ++ Q+ C +T Sbjct: 188 HLEELGFELRRFKTGTPPRVKSSTIDYSKTEEQPGDDHPRAFSFDTVEMLLDQLPCWLTY 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +++ K G RYCPSIEDKIVRF ++ HQIFLEPEG NT+ Sbjct: 248 TNETTHEIIQANLHRSPMFTATKKGTGARYCPSIEDKIVRFSDKPRHQIFLEPEGKNTEE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAI 341 VY G+ST+LPEE+Q + +RTIPGLE V ++R GYAI Sbjct: 308 VYVQGLSTSLPEEVQREMLRTIPGLENVEMMRVGYAI 344 >gi|221136608|ref|XP_002171123.1| PREDICTED: similar to predicted protein, partial [Hydra magnipapillata] Length = 361 Score = 300 bits (768), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 168/352 (47%), Positives = 223/352 (63%), Gaps = 3/352 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M YDVIV+G GHAGCEAAA AA +G ST L+T I MSCNPA+GG+ KG +VR Sbjct: 11 MFQEKYDVIVVGAGHAGCEAAAAAANMGCSTLLVTMNLQNIAQMSCNPAMGGIAKGQIVR 70 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G G V+D IQF++LN+ KGPA+ PR Q+DR + + + NLD Sbjct: 71 EIDALGGYSGIVSDLTAIQFKMLNLSKGPAMWSPRCQSDRMRFAEEWRMMLEGTPNLDFY 130 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V+G +E+N I I I+ TVVLT GTFL G+IHIG + GR G+S S Sbjct: 131 QEMVSGILSEENEIVGIKTSLGLEIKAKTVVLTNGTFLNGLIHIGDKQFGGGRAGESASF 190 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSF--MTDKITNRQI 238 + +K F++GR+KTGTP R+DG+++ + K +Q D FS+ +T +T Q Sbjct: 191 GITEDLLKMGFESGRMKTGTPPRVDGRSLDYSKMIEQPGDVNPSKFSYSDITKPLT-EQR 249 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C +T T+ H ++ E S +++G IKS GPRYCPSIEDKI RF ++ HQ+F+EPE Sbjct: 250 SCHMTYTSETVHDLLREGFDRSPMFNGRIKSIGPRYCPSIEDKINRFADKERHQLFVEPE 309 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKE 350 G +T VY NG ST+LPEE+Q + +R++ G EKV RPGYAIEYDY P + Sbjct: 310 GWHTCEVYVNGFSTSLPEEVQFKALRSVEGFEKVKFFRPGYAIEYDYFPPTQ 361 >gi|221061885|ref|XP_002262512.1| Glucose inhibited division protein A homologue [Plasmodium knowlesi strain H] gi|193811662|emb|CAQ42390.1| Glucose inhibited division protein A homologue,putative [Plasmodium knowlesi strain H] Length = 846 Score = 297 bits (760), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 203/530 (38%), Positives = 270/530 (50%), Gaps = 84/530 (15%) Query: 173 RMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM--- 229 ++ +S + S+ N + F+ R+KTGTP RL +I + E++ ER PF F Sbjct: 317 QLVESSTQSISNQLREHRFEIKRMKTGTPPRLHISSIDFTSLERE-DSERENPFYFSFLN 375 Query: 230 TDKIT-NRQIECGITRTNLETHRIIMENIKHSAIYSG-DIKSYGPRYCPSIEDKIVRFGE 287 ++KI N+ + C T TN TH ++ ++ + D GPRYCPSI K+ +F E Sbjct: 376 SNKINKNKTLPCYKTYTNERTHELVRTHLNELPDFDCYDKLGNGPRYCPSIAKKVTKFSE 435 Query: 288 RNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN 347 +N H I+LEPEG + ++YPNG+S+A P Q + + +I GLE I+ P Y +EY Y+N Sbjct: 436 KNKHVIWLEPEGFHNVLIYPNGLSSAFPINTQKEIVNSIRGLENAEIVFPAYDVEYYYVN 495 Query: 348 PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLD-----CICFS 402 PK L TLETK I GLFLAGQI GTTGYEEAA QG+VAGIN+A S D + Sbjct: 496 PKCLNYTLETKNIKGLFLAGQICGTTGYEEAACQGIVAGINAAINSRSNDEERKEQLILK 555 Query: 403 RTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQK 462 R++SYIGV+I DL +KG+ EPYRMFTSRAEYR+ LRPDN D RLTPI KLG + + R Sbjct: 556 RSESYIGVLIHDLINKGITEPYRMFTSRAEYRLYLRPDNCDIRLTPIAHKLGIVSDERMY 615 Query: 463 RFAKYIQEYNFLRSLLKSLVLTS-----KNLSSTSI--------------SFKQDGKTRT 503 + N L L K L L+S K SS S +F+ D K Sbjct: 616 ILRQKYASVNRLIFLFKKLQLSSSYEGEKKNSSDSCGTDAEHIFVKNSVEAFQTDAKKNA 675 Query: 504 AYEFLS-----------------YPDFSI--------------------QNLFSICPDAR 526 EF S YP + QN +I D Sbjct: 676 HLEFTSRKGNINTLYTIFRSGVEYPLHILLKKIQEVQGWNELQSSLLPEQNNIAIYMDKM 735 Query: 527 KFSSL-------------VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSL 573 K L +E E Y+ Y +Q+ E +I+ +IP D Y L Sbjct: 736 KHCGLSLDENYDLLLNCATLETACAEVKYSPYLTKQIREVDKIRDSFDLVIPPDVTYDRL 795 Query: 574 --PALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIK--KNTVK 619 P LSNE EKL+ +P L A++IEG+T +A+ L YIK KN VK Sbjct: 796 NFPYLSNEEIEKLNKFRPRTLHDANRIEGVTMSAIYYLYYYIKGEKNKVK 845 Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 89/183 (48%), Positives = 119/183 (65%), Gaps = 10/183 (5%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +++ YDVIVIGGGH+GCEA+ ++AKL A T LIT +IG MSCNP+IGG+GKG LV+E Sbjct: 70 LDKKYDVIVIGGGHSGCEASHISAKLRAKTLLITQCKDSIGEMSCNPSIGGIGKGILVKE 129 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL GLMG+ D +GI F++LN++KG AVRG R QADR+LY M+ + +NL +++ Sbjct: 130 IDALGGLMGKAIDKSGIHFKILNIRKGLAVRGHRAQADRDLYNYHMKEYMHDTKNLHILE 189 Query: 122 GEVAGFNTEKNIISSIVMQDNSMI----RCS------TVVLTTGTFLRGVIHIGKLKIPA 171 V E + + +C+ +VVLTTGTFL GV HIGK K Sbjct: 190 STVQSLLIENCTSGDSPLSGRRVYGVKNKCACEFYANSVVLTTGTFLGGVCHIGKEKYHG 249 Query: 172 GRM 174 GR+ Sbjct: 250 GRI 252 >gi|196018455|ref|XP_002118809.1| hypothetical protein TRIADDRAFT_62815 [Trichoplax adhaerens] gi|190578148|gb|EDV18704.1| hypothetical protein TRIADDRAFT_62815 [Trichoplax adhaerens] Length = 324 Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 160/342 (46%), Positives = 216/342 (63%), Gaps = 22/342 (6%) Query: 274 YCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVN 333 YCPSIEDKIVRF ++ HQIFLEPEG +D+VYPNGIST+LP+ +Q +F+R+I GLE Sbjct: 1 YCPSIEDKIVRFKDKERHQIFLEPEGHESDLVYPNGISTSLPKNVQEKFVRSIYGLENAE 60 Query: 334 IIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKS 393 I+R GYAIEYD+I+P+EL TLE+KKI+ LF AGQINGTTGYEEAA QG++AG N+A K Sbjct: 61 IVRWGYAIEYDFIDPRELKETLESKKINNLFFAGQINGTTGYEEAAGQGVIAGANAALKL 120 Query: 394 NKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKL 453 N I SR+DSYIGVMI+DLT+ G EPYRM TSRAEYRI LR DNA RLT IG K Sbjct: 121 NSKQLI-LSRSDSYIGVMINDLTNFGTEEPYRMMTSRAEYRIKLRNDNAAERLTEIGKKY 179 Query: 454 GCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDF 513 G I ++ K + E L+KS L Y F + D+ Sbjct: 180 GLINAQKLKNYEDICTERTKTEDLIKSKQL--------------------VYNFKNTDDY 219 Query: 514 SIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSL 573 I + S + K ++ ++ E+ Y Y R + + + +K +++ +IP+ ++ + Sbjct: 220 -IHQIKSCFSEIAKTDDRILIKIYAENLYRNYEKRLLKDIEILKKDKELIIPRTLNFGEI 278 Query: 574 PALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 LSNE++ KL P + +I+GMTP+AL ++IY+KK Sbjct: 279 KGLSNEIRTKLKNTSPQTIADIKRIQGMTPSALIAIIIYLKK 320 >gi|119569152|gb|EAW48767.1| mitochondrial translation optimization 1 homolog (S. cerevisiae), isoform CRA_h [Homo sapiens] Length = 384 Score = 294 bits (752), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 158/352 (44%), Positives = 233/352 (66%), Gaps = 12/352 (3%) Query: 273 RYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKV 332 RYCPSIE K++RF R HQ++LEPEG+++D++YP G+S LP E+Q + I I GLEK Sbjct: 5 RYCPSIESKVLRFPNRL-HQVWLEPEGMDSDLIYPQGLSMTLPAELQEKMITCIRGLEKA 63 Query: 333 NIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARK 392 +I+PGY ++YDY++P+++ P+LET + LF AGQINGTTGYEEAAAQG++AGIN++ + Sbjct: 64 KVIQPGYGVQYDYLDPRQITPSLETHLVQRLFFAGQINGTTGYEEAAAQGVIAGINASLR 123 Query: 393 SNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMK 452 ++ SRT+ YIGV+IDDLT+ G EPYRMFTSR E+R+SLRPDNAD+RLT G K Sbjct: 124 VSRKPPFVVSRTEGYIGVLIDDLTTLGTSEPYRMFTSRVEFRLSLRPDNADSRLTLRGYK 183 Query: 453 -LGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS----KNLSSTSISFKQDGKTRTAYEF 507 GC+ ++R +R S+LKS+ S K + SIS + R A + Sbjct: 184 DAGCVSQQRYERACWMKSSLEEGISVLKSIEFLSSKWKKLIPEASISTSRSLPVR-ALDV 242 Query: 508 LSYPDFSIQNLFSICPDA-RKFSSL--VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLI 564 L Y + + +L P+ +K++ + ERL+IE++Y + Q+ E K ++ +E + Sbjct: 243 LKYEEVDMDSLAKAVPEPLKKYTKCRELAERLKIEATYESVLFHQLQEIKGVQQDEALQL 302 Query: 565 PKDFDYSSLP--ALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIK 614 PKD DY ++ +LS+E++EKL +P + AS+I G+TPAA+ LL ++K Sbjct: 303 PKDLDYLTIRDVSLSHEVREKLHFSRPQTIGAASRIPGVTPAAIINLLRFVK 354 >gi|156095863|ref|XP_001613966.1| glucose inhibited division protein A homologue [Plasmodium vivax SaI-1] gi|148802840|gb|EDL44239.1| glucose inhibited division protein A homologue, putative [Plasmodium vivax] Length = 872 Score = 294 bits (752), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 191/519 (36%), Positives = 265/519 (51%), Gaps = 80/519 (15%) Query: 176 DSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFAD-ERLIPFSFMTDKIT 234 +S + SL N + F+ R+KTGTP RL ++I + E++ ++ E FSF+ Sbjct: 346 ESSTQSLSNQLRENQFEIKRMKTGTPPRLHIRSIDFTSLEREDSEAENPFYFSFLNSNKV 405 Query: 235 NRQ--IECGITRTNLETHRIIMENIKHSAIYSG-DIKSYGPRYCPSIEDKIVRFGERNGH 291 NR + C T TN TH ++ ++ + D GPRYCPSI K+ +F E+N H Sbjct: 406 NRNKTLPCYKTYTNERTHELVRTHLNELPDFDCYDKLGNGPRYCPSIAKKVTKFAEKNKH 465 Query: 292 QIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKEL 351 I+LEPEG + ++YPNG+S+A P IQ + +R+I GLE I+ P Y +EY Y+NPK L Sbjct: 466 IIWLEPEGFHDVLIYPNGLSSAFPISIQKRIVRSIRGLENAEIVFPAYDVEYYYVNPKCL 525 Query: 352 FPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKL-----DCICFSRTDS 406 TLETK I GLFLAGQI GTTGYEEAA QG++AGIN+A + + R++S Sbjct: 526 NYTLETKNIGGLFLAGQICGTTGYEEAACQGIIAGINAAIGARSTPGETKEQFILKRSES 585 Query: 407 YIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAK 466 YIGV+I DL +KG+ EPYRMFTSRAEYR+ LRPDN D RLTP+ KLG + + R + Sbjct: 586 YIGVLIHDLINKGITEPYRMFTSRAEYRLYLRPDNCDMRLTPLASKLGIVSDERMYILRQ 645 Query: 467 YIQEYNFLRSLLKSLVLTSKN-------------------LSSTSISFKQDGKTRTAYEF 507 N L L K L L+ + + ++ +FK +GK EF Sbjct: 646 KYSSVNRLICLFKKLQLSYPSQGENPPPSDSPGVDPEHQFVKNSVEAFKPEGKNNVHLEF 705 Query: 508 LS-----------------YPDFSI--------------------QNLFSICPDARKFSS 530 S YP ++ QN +I D + Sbjct: 706 TSRKGNINSLYTIFRSGVEYPLHTLLRKLQEVPGCTELYSSLSPEQNNIAIYTDNMQLCG 765 Query: 531 L-------------VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSL--PA 575 L +E E Y+ Y +Q+ E +I+ IP D Y L P Sbjct: 766 LPLHQCGDFLLNSATLETACAEVKYSPYLTKQIREVGKIRGSFDLPIPPDLTYDRLNFPY 825 Query: 576 LSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIK 614 LSNE EKL+ +P L +A++IEG+T +A+ L YIK Sbjct: 826 LSNEEIEKLNKFRPRTLHEANRIEGVTMSAIYYLYYYIK 864 Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 90/182 (49%), Positives = 120/182 (65%), Gaps = 9/182 (4%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 ++++YDVIVIGGGH+GCEA+ ++AKL A T LIT +IG MSCNP+IGG+GKG LV+E Sbjct: 79 LDKNYDVIVIGGGHSGCEASHISAKLRAKTLLITQCRESIGEMSCNPSIGGIGKGILVKE 138 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL GLMG+V D +GI F++LNV+KG AVRG R QADR+LY M+ + +NL +++ Sbjct: 139 IDALGGLMGKVIDKSGIHFKILNVRKGLAVRGHRAQADRDLYNYHMKEHMNGMKNLHILE 198 Query: 122 GEVAGFNTEK---------NIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAG 172 V E + + + ++VVLTTGTFL GV HIGK K G Sbjct: 199 STVQSLLIENCRGGSPPSGRRVYGVKNKCACEFYANSVVLTTGTFLGGVCHIGKEKYQGG 258 Query: 173 RM 174 R+ Sbjct: 259 RI 260 >gi|41058571|gb|AAR99269.1| glucose-inhibited division protein A [Candidatus Blochmannia ulcerosus] Length = 311 Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 150/311 (48%), Positives = 200/311 (64%), Gaps = 3/311 (0%) Query: 41 IGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADR 100 IG MSCNP+IGG+GKGHLV+EIDA+ G+M D +GIQFR+LN KG AV+ R QAD+ Sbjct: 1 IGQMSCNPSIGGIGKGHLVKEIDAMGGVMASAIDQSGIQFRILNSGKGAAVKSTRAQADK 60 Query: 101 ELYRLAMQREILSQENLDVIQGEVAGFNTEKN-IISSIVMQDNSMIRCSTVVLTTGTFLR 159 LYR ++R + Q+ L ++QG V + N II ++ Q I +V+LT GTFL Sbjct: 61 SLYRQFIRRTLEMQDFLSILQGSVEDLIIKNNKIIGVVIPQIGIKIYSKSVILTAGTFLN 120 Query: 160 GVIHIGKLKIPAGRMGDSPSNSLF-NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQF 218 G I+IG GR GD S+ L N RLKTGT R+ ++I + Q+ Sbjct: 121 GRIYIGMNNFTGGRAGDLESSVLLSNKLCTLSLHMSRLKTGTSPRIHSRSINFSDMSIQY 180 Query: 219 ADERLIPFSFM-TDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPS 277 +D+ + FSF+ + K +QI C IT TN +TH II N+ S +YSG I PRYCPS Sbjct: 181 SDDPIPIFSFIGSAKQHPKQIPCYITHTNSKTHDIIRSNLHKSPMYSGLIAGVAPRYCPS 240 Query: 278 IEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRP 337 IEDK+ RF +R+ HQIFLEPEGL+T +Y NGIST+LP ++Q + +++I GLE I+RP Sbjct: 241 IEDKVTRFSDRSAHQIFLEPEGLHTSEIYLNGISTSLPFDVQLEIVQSIRGLEHAQILRP 300 Query: 338 GYAIEYDYINP 348 GYAIEYD+ NP Sbjct: 301 GYAIEYDFFNP 311 >gi|99034211|ref|ZP_01314284.1| hypothetical protein Wendoof_01000922 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 302 Score = 289 bits (739), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 149/277 (53%), Positives = 184/277 (66%), Gaps = 8/277 (2%) Query: 30 STALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGP 89 +T LITHK STIG MSCNPAIGG+ KG +VRE+DALDG+MGR D A I +LN +G Sbjct: 28 NTLLITHKISTIGEMSCNPAIGGVAKGVVVREVDALDGIMGRAIDQASIHSVILNSSRGA 87 Query: 90 AVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKN-----IISSIVMQDNSM 144 AV GPR QADR+LY+ A+Q IL+ NL V + V F E N I +++ Sbjct: 88 AVWGPRAQADRKLYKQAIQEIILNYNNLTVKEESVDDFLIESNNNGELCIKAVITSSGEH 147 Query: 145 IRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARL 204 I S VVLTTGTFLRGVIHIG+ P+GRMGD P+ L N+ K++F GRL+TGTP RL Sbjct: 148 ILTSKVVLTTGTFLRGVIHIGEQVTPSGRMGDKPAVELANTLKKYNFKLGRLRTGTPPRL 207 Query: 205 DGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSA-IY 263 D TI W ++Q D +PFS++T+KI Q+ C IT TN TH+II EN+ SA Y Sbjct: 208 DRGTINWSILQEQVGDNPPVPFSYLTEKINQPQVSCFITHTNENTHKIIRENLHRSASSY 267 Query: 264 SGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 DI PRYCPSIE K+ +F E++ HQIFLEPEGL Sbjct: 268 LDDI--IAPRYCPSIEVKVNKFAEKSSHQIFLEPEGL 302 >gi|237751669|ref|ZP_04582149.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Helicobacter bilis ATCC 43879] gi|229373035|gb|EEO23426.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Helicobacter bilis ATCC 43879] Length = 767 Score = 288 bits (738), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 165/389 (42%), Positives = 235/389 (60%), Gaps = 14/389 (3%) Query: 236 RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFL 295 +++ C +T TN +TH+II EN + +++G I+ GPRYCPSIEDKI RF ++ HQ+FL Sbjct: 371 KELPCFVTYTNEKTHKIIEENFYRAPLFTGQIQGVGPRYCPSIEDKINRFRDKLRHQLFL 430 Query: 296 EPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTL 355 EP+ + Y NG+ST+LP E+Q Q I +I GLE I R GYAIEYDY P LF TL Sbjct: 431 EPQTYSAGEYYVNGLSTSLPYEVQEQVIHSIEGLENAIITRYGYAIEYDYSQPTNLFHTL 490 Query: 356 ETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSA------RKSNKLDCICFSRTDSYIG 409 E++ + L+LAGQINGTTGYEEAAAQG++AGIN+A + +K + SR +SYIG Sbjct: 491 ESRIVKSLYLAGQINGTTGYEEAAAQGILAGINAALSILYTQGKSKRASLVLSREESYIG 550 Query: 410 VMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQ 469 VMIDDL +KG EPYR+FTSRAEYR+ LR DNA R+ P +LG + E + ++ Sbjct: 551 VMIDDLVTKGTNEPYRVFTSRAEYRLLLREDNACFRMLPYSRELGLLDEEILNQLEVDLE 610 Query: 470 EYN-FLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEF-LSYPDFSIQNLFSICPDARK 527 L L +S +NL + ++ + + + L + + P Sbjct: 611 NIEKHLPILSESYTPNKQNLERLTRIGEEGFQNKCHFGLILGRDSMKPTKMRKLDPRFSG 670 Query: 528 FSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRL---IPKDFDYSSLPALSNELKEKL 584 S+ +++LQI + Y Y +Q +++IK EK L IP DF + + LS E+ EKL Sbjct: 671 LSARALKQLQIHAKYQNYIEKQ---SEQIKRSEKNLHIEIPLDFSFEGISGLSLEVIEKL 727 Query: 585 SILKPFNLLQASKIEGMTPAALNLLLIYI 613 ++ KP L +A I G+TPA+L +L ++I Sbjct: 728 TLAKPKTLKEAKLISGITPASLEVLELHI 756 Score = 199 bits (507), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 108/250 (43%), Positives = 145/250 (58%), Gaps = 15/250 (6%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YD+IV+GGGHAG EA+ + AK+G T LITH I SCNPA+GGLGKGHL +E+D+ Sbjct: 4 NYDIIVVGGGHAGVEASHICAKMGLQTLLITHLIDNIALASCNPAVGGLGKGHLTKEVDS 63 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLMG + D +G+Q+R+LN KGPAVRG R Q D +LYR + +L+ +NL VIQG V Sbjct: 64 LGGLMGAITDISGLQYRILNASKGPAVRGTRAQIDMDLYRKHARDILLNTKNLHVIQGNV 123 Query: 125 ----AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 + EK + + +++T GTFL+G+IHIG+ K GR G+ SN Sbjct: 124 IEILSQTKEEKTEAIGVKLSIQKEFFAKKIIITAGTFLKGLIHIGENKSENGRAGEISSN 183 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADER---------LIPFSFMTD 231 L S + RLKTGT R+ G +I EK + D L S +TD Sbjct: 184 ELSESLKQLGIPLSRLKTGTCPRILGSSINHTTLEKHYGDAHYDELHNLSDLHTASLLTD 243 Query: 232 KI--TNRQIE 239 + TN+ IE Sbjct: 244 EYQNTNKHIE 253 >gi|56808373|ref|ZP_00366128.1| COG0445: NAD/FAD-utilizing enzyme apparently involved in cell division [Streptococcus pyogenes M49 591] Length = 345 Score = 284 bits (727), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 150/338 (44%), Positives = 213/338 (63%), Gaps = 4/338 (1%) Query: 283 VRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIE 342 VRF ++ HQ+FLEPEG +T+ VY G+ST+LPE++Q I +I GLEK ++R GYAIE Sbjct: 1 VRFADKERHQLFLEPEGRDTEEVYVQGLSTSLPEDVQKDLIHSIKGLEKAEMMRTGYAIE 60 Query: 343 YDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFS 402 YD + P +L TLETK ISGLF AGQ NGT+GYEEAA QGL+AGIN+A K + Sbjct: 61 YDIVLPHQLRATLETKLISGLFTAGQTNGTSGYEEAAGQGLIAGINAALKVQGKPELILK 120 Query: 403 RTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQK 462 R+D+YIGVMIDDL +KG LEPYR+ TSRAEYR+ LR DNAD RLT IG +G + + R K Sbjct: 121 RSDAYIGVMIDDLVTKGTLEPYRLLTSRAEYRLILRHDNADMRLTEIGRDIGLVDDERWK 180 Query: 463 RFA-KYIQEYNFLRSL--LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLF 519 F K Q N L+ L +K + + N + FK TA EF+ P+ Sbjct: 181 AFEIKKNQFDNELKRLNSIKLKPVKATNDRVQELGFKPLTDAMTAKEFMRRPEIDYATAV 240 Query: 520 S-ICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSN 578 S + P A + +IE L+ E Y Y + + + ++K E++ IP + D+ ++ +++ Sbjct: 241 SFVGPAAEDLDAKIIELLETEIKYEGYIRKALDQVAKMKRMEEKRIPANIDWDAIDSIAT 300 Query: 579 ELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKN 616 E ++K + P + QAS+I G+ PA +++L+IY++ N Sbjct: 301 EARQKFKKINPETIGQASRISGVNPADISILMIYLEGN 338 >gi|207092762|ref|ZP_03240549.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Helicobacter pylori HPKX_438_AG0C1] Length = 304 Score = 276 bits (705), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 137/298 (45%), Positives = 188/298 (63%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + D++V+GGGHAG EA+ +AAK+GA LIT TIG SCNPAIGGLGKGHL +E+D Sbjct: 3 KESDILVVGGGHAGIEASLIAAKMGARVHLITMLIDTIGLASCNPAIGGLGKGHLTKEVD 62 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 L G MG + D +G+Q+RVLN KGPAVRG R Q D + YR+ + +L+ NL V Q Sbjct: 63 VLGGAMGIITDHSGLQYRVLNASKGPAVRGTRAQIDMDTYRIFARNLVLNTPNLSVSQEM 122 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 + + + + N+ + V++TTGTFL+GV+HIG+ + GR G++ SNSL Sbjct: 123 TESLIIKNDEVVGVTTNINNTYKAKKVIITTGTFLKGVVHIGEHQNQNGRFGENASNSLA 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + F RLKTGT R+ G +I ++ E+ F D FS+ T Q+ C IT Sbjct: 183 LNLRDLGFKVDRLKTGTCPRVAGNSIDFEGLEEHFGDTNPPYFSYKTKDFNPTQLSCFIT 242 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 TNL TH+II +N + ++SG I+ GPRYCPSIEDKI RF E+ HQ+FLEP+ ++ Sbjct: 243 YTNLITHQIIRDNFHRAPLFSGQIEGIGPRYCPSIEDKINRFSEKERHQLFLEPQTIH 300 >gi|218460005|ref|ZP_03500096.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rhizobium etli Kim 5] Length = 211 Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 128/207 (61%), Positives = 153/207 (73%) Query: 44 MSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELY 103 MSCNPAIGGLGKGHLVREIDA+DGLMGRVAD AGIQFR+LN KKG AVRGPRTQADR+LY Sbjct: 1 MSCNPAIGGLGKGHLVREIDAMDGLMGRVADLAGIQFRMLNRKKGAAVRGPRTQADRKLY 60 Query: 104 RLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIH 163 RLAM I + LD+++G+ + N ++ ++M+D ++ VVLTTGTFLRG+IH Sbjct: 61 RLAMLAAIEATPGLDIVEGDAFDLDVVDNRVAGVIMKDGRRLKAPAVVLTTGTFLRGLIH 120 Query: 164 IGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERL 223 IG K PAGR+G+ PS L + + GRLKTGTPARLDGKTI W +Q ADE L Sbjct: 121 IGSDKTPAGRVGEPPSLGLSATLARLGLRLGRLKTGTPARLDGKTIDWQSVGRQGADEDL 180 Query: 224 IPFSFMTDKITNRQIECGITRTNLETH 250 +PFSFMTD IT RQIECG+T + H Sbjct: 181 VPFSFMTDSITTRQIECGVTPGRPKRH 207 >gi|124806770|ref|XP_001350827.1| glucose inhibited division protein A homologue, putative [Plasmodium falciparum 3D7] gi|23496956|gb|AAN36507.1|AE014851_26 glucose inhibited division protein A homologue, putative [Plasmodium falciparum 3D7] Length = 972 Score = 267 bits (683), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 147/353 (41%), Positives = 204/353 (57%), Gaps = 29/353 (8%) Query: 167 LKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPF 226 L IP ++ +S + ++ + +F+ R+KTGTP RLD +I + E++ E+ PF Sbjct: 341 LNIPFEKLIESSTKNIAQQLRENNFEIKRMKTGTPPRLDINSINFHVLERE-DTEKDYPF 399 Query: 227 SF----MTDKITNRQIECGITRTNLETHRIIMENIKHSAIY-SGDIKSYGPRYCPSIEDK 281 F M N+ + C T TNL+TH ++ N+ Y S D GPRYCPSI K Sbjct: 400 YFSFLNMNKINNNKTLPCYKTYTNLKTHELVRNNLAQLPDYDSFDKFGNGPRYCPSIAKK 459 Query: 282 IVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAI 341 +++F E+ H I++EPEG N ++YPNG+S+A P IQ I +I GLE I+ P Y + Sbjct: 460 VMKFSEKKKHIIWIEPEGFNNKLIYPNGLSSAYPIHIQKDIINSIKGLENAQIVFPAYDV 519 Query: 342 EYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSA----------- 390 EY Y+NPK L TLETK + GLFLAGQI GTTGYEEAA QG+VAGIN+A Sbjct: 520 EYYYVNPKCLNYTLETKNVKGLFLAGQICGTTGYEEAACQGIVAGINAALNSKKDNNKYN 579 Query: 391 ------------RKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLR 438 +++++ R +SYIGV+I DL +KG+ EPYRMFTSRAEYR+ LR Sbjct: 580 NNNNNENNNNHNINNDEVNKFILKRNESYIGVLIHDLINKGITEPYRMFTSRAEYRLFLR 639 Query: 439 PDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSST 491 PDN D RLTP +LG + + R + N + K +++ N +ST Sbjct: 640 PDNCDIRLTPKANQLGIVSKERIYMLRQKYSSVNKFIYVFKKILINEDNPNST 692 Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 92/193 (47%), Positives = 121/193 (62%), Gaps = 20/193 (10%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + ++YDVIVIGGGH+GCEA+ ++AK A T L+T TIG MSCNP+IGG+GKG LV+E Sbjct: 85 VKKNYDVIVIGGGHSGCEASYISAKSNAMTLLVTQNKETIGEMSCNPSIGGIGKGILVKE 144 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL GLMG+V D +GI F++LN+KKG AVRG R QADR+LY M+ + + NLD+++ Sbjct: 145 IDALGGLMGKVIDKSGIHFKILNMKKGLAVRGHRAQADRDLYNYYMKEYLYNTPNLDILE 204 Query: 122 GEVAGF--------------------NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGV 161 V N +K I I + + I V+LTTGTFL G+ Sbjct: 205 NSVQSLLIDTYEDKNNNNDNINDYNNNVKKKKIYGIKNKCSCEIYSHNVILTTGTFLGGI 264 Query: 162 IHIGKLKIPAGRM 174 HIGK K GR+ Sbjct: 265 CHIGKDKYIGGRI 277 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 32/78 (41%), Positives = 49/78 (62%), Gaps = 2/78 (2%) Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKD--FDYSSLPALSNELKEKLSILKPFNLLQAS 596 E Y++Y +Q E ++I +IP+D +D ++ P LSNE EKL+ KP L +A+ Sbjct: 886 EIKYSSYLKKQFQEIRKINDNFDLVIPRDLKYDRNNFPYLSNEEIEKLNKFKPQTLFEAN 945 Query: 597 KIEGMTPAALNLLLIYIK 614 KIEG+T +A+N L +IK Sbjct: 946 KIEGVTMSAVNYLYYHIK 963 >gi|253582392|ref|ZP_04859615.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Fusobacterium varium ATCC 27725] gi|251835931|gb|EES64469.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Fusobacterium varium ATCC 27725] Length = 363 Score = 266 bits (681), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 142/344 (41%), Positives = 210/344 (61%), Gaps = 12/344 (3%) Query: 281 KIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYA 340 K + +G++N H +FLE EG T +Y G+S++LP ++Q +R I GLE +I+R YA Sbjct: 18 KFLVYGDKNQHHLFLEREGYETTEIYLGGLSSSLPTDVQDGMVRNISGLENAHIMRYAYA 77 Query: 341 IEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCIC 400 IEYDY+ P+E+ TLE+K I LFLAGQINGT+GYEEA AQGL+AGIN+ RK + I Sbjct: 78 IEYDYVPPQEIKYTLESKTIENLFLAGQINGTSGYEEAGAQGLLAGINAVRKLQGKEPII 137 Query: 401 FSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR 460 R DSYIG ++DDL SKG EPYRMFT+R+EYR++LR DNAD RL+ IG ++G + E Sbjct: 138 LDRADSYIGTLVDDLVSKGTNEPYRMFTARSEYRLALREDNADLRLSKIGYEVGLLPEEE 197 Query: 461 QKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFK------QDGKTRTAYEFLSYPDFS 514 R + ++ ++ LK + N + K +DG T +E L PD Sbjct: 198 YLRVVQKEKDVELIKEKLKENYVGPSNPRVNEVLRKCGEAELKDGT--TYFELLRRPDVK 255 Query: 515 IQNLFSICP----DARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDY 570 ++ I + +S +++++ Y+ Y R M ++ K E + +P+D DY Sbjct: 256 YSDIKYIAELSDLELGDYSKDTEYQVEVQVKYSGYIERSMKMIEKHKSLENKRLPEDLDY 315 Query: 571 SSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIK 614 SL + E K+KL ++P+N+ QAS+I G++PA + +LLIY+K Sbjct: 316 DSLENIPKEAKDKLKAVRPYNIGQASRISGVSPADIQVLLIYLK 359 >gi|322380477|ref|ZP_08054675.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Helicobacter suis HS5] gi|321147096|gb|EFX41798.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Helicobacter suis HS5] Length = 290 Score = 264 bits (674), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 137/288 (47%), Positives = 177/288 (61%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALD 66 D++V+GGGHAG EA+ VAAK+GA L+T IG SCNPAIGGLGKGHLV+EIDAL Sbjct: 3 DIVVVGGGHAGIEASIVAAKMGAKVHLLTLLIENIGLASCNPAIGGLGKGHLVKEIDALG 62 Query: 67 GLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAG 126 G+MG ++D +G+QFR+LN KGPAVRG R Q D +LYR + +L+ NL V Q V G Sbjct: 63 GVMGILSDLSGLQFRILNASKGPAVRGTRAQIDMDLYRQNARNLVLNTSNLSVSQEMVEG 122 Query: 127 FNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSF 186 E + + + S V+LTTGTFL+G++HIG GR G+S S L Sbjct: 123 LLIENGAVVGVKSTLGKEYKASKVILTTGTFLQGLVHIGTHTSQNGRFGESASIELAKHL 182 Query: 187 MKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTN 246 + GRLKTGT RL G +I + + E F D FS T Q+ C IT TN Sbjct: 183 KTLGLEIGRLKTGTCPRLAGNSIDFTELEAHFGDFPPPKFSHKTKDFNPIQLPCFITYTN 242 Query: 247 LETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 +TH +I +N + ++SG I+ GPRYCPSIEDKI RF ++ HQ+F Sbjct: 243 SKTHALIEQNFHLAPMFSGQIEGVGPRYCPSIEDKIYRFKDKERHQLF 290 >gi|70946378|ref|XP_742910.1| glucose inhibited division protein A [Plasmodium chabaudi chabaudi] gi|56522147|emb|CAH76906.1| glucose inhibited division protein A homologue, putative [Plasmodium chabaudi chabaudi] Length = 862 Score = 261 bits (667), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 144/307 (46%), Positives = 191/307 (62%), Gaps = 12/307 (3%) Query: 190 DFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM---TDKITN-RQIECGITRT 245 +F+ R+KTGTP RL +I +D EK+ E+ PF F ++KI N + + C T T Sbjct: 324 NFEIKRMKTGTPPRLCKDSINFDILEKE-GTEKKHPFYFSFLNSNKINNNKTLPCYKTYT 382 Query: 246 NLETHRIIMENIKHSAIYSG-DIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 N+ TH ++++ + + D GPRYCPSI K+ +F E+ H I+LEPEG + + Sbjct: 383 NMNTHELVIKYLNELPDFDCYDKLGNGPRYCPSIAKKVTKFSEKKKHIIWLEPEGFDNIL 442 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNG+S+A P Q + I +I GLE I+ P Y +EY Y+NPK L TLETK I+GLF Sbjct: 443 IYPNGLSSAYPLNRQQEIINSIKGLENAKILFPAYDVEYFYVNPKCLNYTLETKIINGLF 502 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNK------LDCICFSRTDSYIGVMIDDLTSK 418 L+GQI GTTGYEEAA QG+VAGIN+A S K + +R DSYIGV+I DL +K Sbjct: 503 LSGQICGTTGYEEAACQGIVAGINAALNSLKKKNMSPISNFVLTRNDSYIGVLIHDLINK 562 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G+ EPYRMFTSRAEYR+ LRPDNAD RLTP +LG + R N + S+ Sbjct: 563 GITEPYRMFTSRAEYRLYLRPDNADIRLTPKAEQLGIASKERLYILNHKYYSVNKIISVF 622 Query: 479 KSLVLTS 485 K L L + Sbjct: 623 KKLTLNN 629 Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 95/191 (49%), Positives = 122/191 (63%), Gaps = 20/191 (10%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIGGGH+GCEA+ ++AKLGA T LIT +IG MSCNP+IGG+GKG LV+EID Sbjct: 57 KKYDVIVIGGGHSGCEASYISAKLGAKTLLITQCKESIGEMSCNPSIGGIGKGILVKEID 116 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL GLMG+V D +GI F++LN+KKG AVRG R QADR+LY M+ + + NL +++ Sbjct: 117 ALGGLMGKVIDKSGIHFKILNLKKGLAVRGHRAQADRDLYNHYMKEYMFNMPNLYILENT 176 Query: 124 VAGFNTEKNII--SSIVMQDNS------------MIRCS------TVVLTTGTFLRGVIH 163 V E +I S M +N +CS V+LTTGTFL G+ H Sbjct: 177 VHSLLIENSITQNDSTNMDENMEEKKKYKYVYGIKNKCSCEFYADNVILTTGTFLGGICH 236 Query: 164 IGKLKIPAGRM 174 IGK K GR+ Sbjct: 237 IGKDKYKGGRI 247 Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 2/86 (2%) Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPK--DFDYSSLPALSNELKEKLSILKP 589 ++E E Y++Y +Q+ E +I IPK +D ++ P LSNE EKL+ +P Sbjct: 770 ILETACAEVKYSSYLKKQITEINKINSNFNLAIPKTIKYDRNNFPYLSNEEIEKLNKFRP 829 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKK 615 NL +A+KIEG+T + + L YI K Sbjct: 830 SNLDEANKIEGVTMSGIYYLYHYIMK 855 >gi|119569146|gb|EAW48761.1| mitochondrial translation optimization 1 homolog (S. cerevisiae), isoform CRA_b [Homo sapiens] Length = 354 Score = 256 bits (655), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 140/325 (43%), Positives = 211/325 (64%), Gaps = 11/325 (3%) Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 +++D++YP G+S LP E+Q + I I GLEK +I+PGY ++YDY++P+++ P+LET Sbjct: 1 MDSDLIYPQGLSMTLPAELQEKMITCIRGLEKAKVIQPGYGVQYDYLDPRQITPSLETHL 60 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 + LF AGQINGTTGYEEAAAQG++AGIN++ + ++ SRT+ YIGV+IDDLT+ G Sbjct: 61 VQRLFFAGQINGTTGYEEAAAQGVIAGINASLRVSRKPPFVVSRTEGYIGVLIDDLTTLG 120 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMK-LGCIGERRQKRFAKYIQEYNFLRSLL 478 EPYRMFTSR E+R+SLRPDNAD+RLT G K GC+ ++R +R S+L Sbjct: 121 TSEPYRMFTSRVEFRLSLRPDNADSRLTLRGYKDAGCVSQQRYERACWMKSSLEEGISVL 180 Query: 479 KSLVLTS----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA-RKFSSL-- 531 KS+ S K + SIS + R A + L Y + + +L P+ +K++ Sbjct: 181 KSIEFLSSKWKKLIPEASISTSRSLPVR-ALDVLKYEEVDMDSLAKAVPEPLKKYTKCRE 239 Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLP--ALSNELKEKLSILKP 589 + ERL+IE++Y + Q+ E K ++ +E +PKD DY ++ +LS+E++EKL +P Sbjct: 240 LAERLKIEATYESVLFHQLQEIKGVQQDEALQLPKDLDYLTIRDVSLSHEVREKLHFSRP 299 Query: 590 FNLLQASKIEGMTPAALNLLLIYIK 614 + AS+I G+TPAA+ LL ++K Sbjct: 300 QTIGAASRIPGVTPAAIINLLRFVK 324 >gi|254496641|ref|ZP_05109504.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Legionella drancourtii LLAP12] gi|254354069|gb|EET12741.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Legionella drancourtii LLAP12] Length = 300 Score = 246 bits (628), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 129/296 (43%), Positives = 189/296 (63%), Gaps = 2/296 (0%) Query: 323 IRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQG 382 +RT+ G E +I RPGYAIEYDY +P+ L L+TK I LF AGQINGTTGYEEAAAQG Sbjct: 1 MRTLKGFENAHITRPGYAIEYDYFDPRGLTSFLQTKPIPNLFFAGQINGTTGYEEAAAQG 60 Query: 383 LVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNA 442 ++AG+N+A + + + C R ++YIGV+IDDL + G EPYRMFTSRAEYR+ LR DNA Sbjct: 61 IIAGMNAALQVQEKELWCPRRDEAYIGVLIDDLITCGTQEPYRMFTSRAEYRLLLREDNA 120 Query: 443 DNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK-SLVLTSKNLSSTSISFKQDGKT 501 D RLT G +LG +G+ R +F+ + ++LL + V N + I Sbjct: 121 DLRLTAKGRELGLVGDERWYQFSAKREAIEATQALLHNTWVRVGHNDALKEILLNPMQHD 180 Query: 502 RTAYEFLSYPDFSIQNLFSICP-DARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEE 560 A EF+ P+ + Q+L + + V E+++I++ YA Y RQ + ++++ +E Sbjct: 181 NRASEFIKRPEINYQHLLMLTDLGLPELPPAVSEQIEIQNKYAGYIDRQQQDIEKMRKQE 240 Query: 561 KRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKN 616 +P+ DY+ + LSNE+ +KL+ +KP +L QA +I G+TPAAL+LLL+++KK Sbjct: 241 HTALPESLDYNEVTGLSNEVIQKLTKIKPTSLAQAGRISGVTPAALSLLLVHLKKQ 296 >gi|255017479|ref|ZP_05289605.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes FSL F2-515] Length = 311 Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 126/308 (40%), Positives = 192/308 (62%), Gaps = 7/308 (2%) Query: 316 EEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGY 375 EE+Q + +RTIPGLE V ++R GYAIEYD + P +L+P+LETK + GLF AGQINGT+GY Sbjct: 1 EEVQREMLRTIPGLENVEMMRVGYAIEYDAVMPDQLWPSLETKLVEGLFTAGQINGTSGY 60 Query: 376 EEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRI 435 EEAA QGL+AGIN+ARK + + + R +YIGV+IDDL +KG EPYR+ TSRAEYR+ Sbjct: 61 EEAAGQGLMAGINAARKVFEKEPVILGRDQAYIGVLIDDLVTKGTEEPYRLLTSRAEYRL 120 Query: 436 SLRPDNADNRLTPIGMKLGCIGERRQKRF-----AKYIQEYNFLRSLLKSLVLTSKNLSS 490 LR DNAD RLT IG ++G I + R +RF A ++ ++ +K L Sbjct: 121 LLRHDNADLRLTEIGHEIGLISDERYERFLAKQSALEAEKERLEKTRIKPTAEVQAMLKE 180 Query: 491 TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQM 550 +DG A + L P+ + + I + + E+++I+ Y Y + Sbjct: 181 IGSGELKDGI--LAADLLRRPEITYDKIAQIVSRETFVTDEIAEQVEIQIKYEGYIQKSN 238 Query: 551 IEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLL 610 ++ +++K E + IP++ DY ++ L+ E EKL ++P ++ QAS+I G+ PA +++LL Sbjct: 239 LQVEKMKRMEDKKIPENIDYDAISGLATEALEKLKKIEPLSIAQASRISGVNPADISILL 298 Query: 611 IYIKKNTV 618 +YI++ + Sbjct: 299 VYIEQGKI 306 >gi|260890891|ref|ZP_05902154.1| glucose-inhibited division protein A [Leptotrichia hofstadii F0254] gi|260859444|gb|EEX73944.1| glucose-inhibited division protein A [Leptotrichia hofstadii F0254] Length = 377 Score = 243 bits (621), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 142/376 (37%), Positives = 212/376 (56%), Gaps = 19/376 (5%) Query: 257 IKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPE 316 +K+S I +G + + GPR+CPS++ KI+ F E+ HQIFLE E + +D +Y NG +TA+P Sbjct: 2 LKYSPIVTGIVSTKGPRHCPSLDRKIMNFPEKTNHQIFLEQESVESDEIYINGFTTAMPP 61 Query: 317 EIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYE 376 Q ++TI GLE I+R GYA+EY+++ +L TLETK I GL+ AG INGT+GYE Sbjct: 62 FAQEAMLKTISGLENAKIVRYGYAVEYNFVPAHQLKLTLETKVIDGLYTAGTINGTSGYE 121 Query: 377 EAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRIS 436 EAA QG +AG+N+ARK I R++ YIGV+IDD+ +K EPYR+ SRAEYR++ Sbjct: 122 EAACQGFMAGVNAARKILGKKEIVIDRSEGYIGVLIDDIINKKTPEPYRVLPSRAEYRLT 181 Query: 437 LRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQE-------------YNFLRSLLKSLVL 483 LR DN RL ++ + + QE Y + K L + Sbjct: 182 LRQDNIFIRLLEKAKEIRLLNAEKLTELENTCQEIENEVERLKGITVYPTKENNEKLLEI 241 Query: 484 TSKNLSSTSISFKQDGKTR-----TAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 K S S +++ K + +EFL+ + + NL + K S L E+++I Sbjct: 242 VEKQNKSESSEIEKNSKNSMNSPVSGFEFLARKEINYNNLSEFV-ETVKLSDLAKEQVEI 300 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + Y + R+ + ++ K EK +IPKDFDY S+ LSN L +P + QAS+I Sbjct: 301 NAKYNVFIEREKAQIEKFKKLEKMIIPKDFDYESVKGLSNIAISGLMYGQPETIGQASRI 360 Query: 599 EGMTPAALNLLLIYIK 614 G+T ++LL+ +K Sbjct: 361 SGVTYNDISLLIAILK 376 >gi|34763617|ref|ZP_00144548.1| Glucose inhibited division protein A [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27886715|gb|EAA23857.1| Glucose inhibited division protein A [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 333 Score = 243 bits (621), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 132/331 (39%), Positives = 194/331 (58%), Gaps = 13/331 (3%) Query: 295 LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT 354 +E EG T+ +Y G+S++LP ++Q + ++ I G E I+R YAIEYDY+ P+E+ T Sbjct: 1 MEREGYETNEIYLGGLSSSLPVDVQEEMLKNIKGFENAKIMRYAYAIEYDYVPPEEIKYT 60 Query: 355 LETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDD 414 LE++ + LFLAGQINGT+GYEEA AQGL+AGIN+ +K + + R DSYIG +IDD Sbjct: 61 LESRTVENLFLAGQINGTSGYEEAGAQGLMAGINAVKKLRNEEPVILDRADSYIGTLIDD 120 Query: 415 LTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFL 474 L SKG EPYRMFT+R+EYR+ LR DNAD RLT +G +LG + E +R K ++ + Sbjct: 121 LVSKGTNEPYRMFTARSEYRLYLREDNADLRLTKLGYELGLVPEEEYQRVEKKRKDVKII 180 Query: 475 RSLLKSLVLTSKNLSSTSISFK------QDGKTRTAYEFLSYPDFSIQNLFSICP----- 523 +L + N I K +DG T E L P+ + +++ I Sbjct: 181 TEILVKTNVGPSNPRVNEILLKRGENPIKDGS--TLLELLRRPEVTFEDIKYISEEIKGL 238 Query: 524 DARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEK 583 D + + +++I Y Y R + ++ K E + IP D DY L + E K+K Sbjct: 239 DLQDYDHDTTYQVEITVKYEGYINRALKMIEKHKSMENKKIPVDIDYDDLKTIPKEAKDK 298 Query: 584 LSILKPFNLLQASKIEGMTPAALNLLLIYIK 614 L +KP N+ QAS+I G++PA + +LIY+K Sbjct: 299 LKRIKPINIGQASRISGVSPADIQAILIYLK 329 >gi|225431681|ref|XP_002264011.1| PREDICTED: similar to glucose-inhibited division A family protein [Vitis vinifera] Length = 490 Score = 240 bits (613), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 128/317 (40%), Positives = 197/317 (62%), Gaps = 2/317 (0%) Query: 308 NGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAG 367 NG ST LPE +Q +RT+PGLE +++RP YA+EYD++ + +L TK+I GLF +G Sbjct: 142 NGFSTGLPERLQLPLLRTLPGLENCSMLRPAYAVEYDFLPAYQCSRSLMTKQIEGLFFSG 201 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 QINGTTGYEEAAAQGL++GIN+AR S+ I R SYIG +IDDL +K + EPYRM Sbjct: 202 QINGTTGYEEAAAQGLISGINAARYSDGKSLIVLERESSYIGTLIDDLVTKDLREPYRML 261 Query: 428 TSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKN 487 TSR+E+R+ LR DNAD+RLTP+G ++G I +RR K + + + + L+++ ++ + Sbjct: 262 TSRSEHRLLLRSDNADSRLTPLGREIGLIDDRRWKIYQDKQAQISQEKKRLRTVRISGGD 321 Query: 488 LSS--TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAY 545 L+S T +S + + T L P + L S + E ++I+ Y + Sbjct: 322 LASDVTHLSGQPVKDSSTLESILKKPHVQYKVLDKHGFGNELLSKIEKECVEIDIKYEGF 381 Query: 546 TGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAA 605 RQ + +++ ++ R +P+D DY ++ LS E +EKLS ++P + QAS++ G++PA Sbjct: 382 IMRQQSQLQQMARQQHRPLPEDLDYYAMTTLSLEAREKLSKIRPQTIGQASRVGGVSPAD 441 Query: 606 LNLLLIYIKKNTVKLNE 622 + LLI ++ N K E Sbjct: 442 ITALLIILETNRRKAQE 458 >gi|291333885|gb|ADD93566.1| hypothetical protein [uncultured marine bacterium MedDCM-OCT-S04-C293] Length = 319 Score = 239 bits (611), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 131/308 (42%), Positives = 191/308 (62%), Gaps = 10/308 (3%) Query: 314 LPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTT 373 +P++ Q +F+R+I G E I + GYA+EYD+ +P+EL TLET+KI L+ AGQINGTT Sbjct: 1 MPKDCQEKFVRSIEGFESAKITQYGYAVEYDFFDPRELHETLETRKIKNLYFAGQINGTT 60 Query: 374 GYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEY 433 GYEEAAAQGLVAG N+A D R +SY+GV+IDDL + G EPYRMFTSR+E+ Sbjct: 61 GYEEAAAQGLVAGANAALSFLGKDPWTPGREESYLGVLIDDLVTLGTKEPYRMFTSRSEH 120 Query: 434 RISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLS-STS 492 R+ LR DNAD R+T K+G + E R K F++ + + L L L ++ +S Sbjct: 121 RLILREDNADQRITEKAYKVGLVSESRYKIFSEKKNKIIKEKDKLAKLFLRPEDEKIYSS 180 Query: 493 ISFKQDGKTRTAYEFLSYPDFSIQNL---FSI-CPDARKFSSLVIERLQIESSYAAYTGR 548 + K+ + + L PD Q+L FSI PD + ++ ++ Y+ Y R Sbjct: 181 LKIKEPKSATSFLDLLKRPDLDFQDLAKAFSIETPD-----NDIVFDIETNQRYSGYIKR 235 Query: 549 QMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNL 608 QM E +++K IP +FDYS++ LS E+ +KLS ++P L QA +I G+TPAA++ Sbjct: 236 QMDEIEKMKKNRNAHIPSNFDYSNVKGLSAEITQKLSKVEPRTLAQAWRIPGITPAAISA 295 Query: 609 LLIYIKKN 616 L++Y+K+N Sbjct: 296 LMVYLKRN 303 >gi|328672618|gb|AEB26865.1| glucose-inhibited division protein, degenerate [Anaplasma phagocytophilum HZ] Length = 249 Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 115/195 (58%), Positives = 144/195 (73%), Gaps = 1/195 (0%) Query: 267 IKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTI 326 I PRYCPS+E+KI RF + HQIFLEPEGL T+ VYPNGIST+ P E+Q + +R+I Sbjct: 48 IDVMAPRYCPSVEEKIRRFPDHKSHQIFLEPEGLETNSVYPNGISTSCPIEVQLEMLRSI 107 Query: 327 PGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAG 386 GLE+ ++R GY +EY++I+P+EL+ TLETKKI GLF AGQINGTTGYEEAA QG+VAG Sbjct: 108 NGLEQAVMLRHGYTVEYNFIDPRELYHTLETKKIKGLFCAGQINGTTGYEEAAGQGIVAG 167 Query: 387 INSARK-SNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNR 445 N+A + + R+DSYIGVMIDDL + G EPYR+FTSRAEYR++LR DNAD Sbjct: 168 ANAALSLVQNQEPLVLKRSDSYIGVMIDDLVTLGTSEPYRLFTSRAEYRLTLRSDNADMC 227 Query: 446 LTPIGMKLGCIGERR 460 LT IG + + R Sbjct: 228 LTEIGRAYSLVSQER 242 >gi|255550542|ref|XP_002516321.1| glucose inhibited division protein A, putative [Ricinus communis] gi|223544551|gb|EEF46068.1| glucose inhibited division protein A, putative [Ricinus communis] Length = 375 Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 127/282 (45%), Positives = 171/282 (60%), Gaps = 2/282 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 I YDVIV+GGGHAGCEAA +A+LGA T L+T I CNPA+GG K LV E Sbjct: 79 IEERYDVIVVGGGHAGCEAALASARLGAKTLLLTLNLDRIAWQPCNPAVGGPAKSQLVHE 138 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DAL G +G+ AD +Q RVLN+ +GPAVR R Q D+ Y + +++ + S NL + + Sbjct: 139 VDALGGEIGKAADRCYLQKRVLNISRGPAVRALRAQTDKREYAMLLKKIVESTPNLFIRE 198 Query: 122 GEVAGFNTEKNIISSIVMQDNSM-IRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 V KN V M S+V+LTTGTF+ G I +G+ +PAGR G+S S Sbjct: 199 AMVTDILLGKNDNVEGVRTFFGMNFYASSVILTTGTFMSGKIWVGRTSMPAGRAGESSSE 258 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIE 239 L + + F+T RLKTGTPAR+D +T+ + + E Q DE + FSF D I Q+ Sbjct: 259 GLTENLQRLGFETDRLKTGTPARVDIRTVDFSRLEPQHGDEEVSWFSFDPDVHIERAQMC 318 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDK 281 C +TRT TH++I EN+ + Y G +++ GPRYCPSIEDK Sbjct: 319 CYLTRTTKITHQLIKENLHETPTYGGWVEAKGPRYCPSIEDK 360 >gi|301630293|ref|XP_002944256.1| PREDICTED: tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG-like [Xenopus (Silurana) tropicalis] Length = 472 Score = 233 bits (595), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 134/357 (37%), Positives = 202/357 (56%), Gaps = 24/357 (6%) Query: 289 NGHQIFLEPEGLNTDVVYPNGISTALPEE----------IQHQFIRTIPGLEKVNIIRPG 338 N HQ++L + ++ V+ + ++ A+ + + +R++ GLE +I+RPG Sbjct: 114 NQHQLWLFQQAVDDLVLEGDRVAGAVTXVGITFRSRTVVLTYALVRSMRGLENAHILRPG 173 Query: 339 YAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDC 398 YAIEYDY +P+ L + ET++I GLF AGQINGTTGYEEAAAQGL AG+N+A + Sbjct: 174 YAIEYDYFDPRSLKSSFETRQIQGLFFAGQINGTTGYEEAAAQGLYAGLNAALQCRSEAP 233 Query: 399 ICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGE 458 R +Y+GV++DDL +KGV EPYRMFTSRAE+R+ LR DNAD RLT G ++G + + Sbjct: 234 WLPGRDQAYLGVLVDDLVTKGVTEPYRMFTSRAEFRLQLREDNADMRLTEAGRRMGLVPD 293 Query: 459 RRQKRFAKYIQEYNFLRSLLKSLVLTSKNLS---STSISFKQDGKTRTAYEFLSYPDFSI 515 R F + + LKS + + L+ S + K ++ L P Sbjct: 294 ARWNAFCRKRDAVSRETERLKSTWVNPRILAAQESERVLGKAIEHEYKLFDLLRRPGVGY 353 Query: 516 QNLFSIC------PDARK-----FSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLI 564 + L ++ D + S VIE+++I + YA Y RQ E + E+ + Sbjct: 354 EALMAMAGGKYASGDVSRETLGDLSVPVIEQVEIAAKYAGYIDRQKDEVQRAAHFEQLRL 413 Query: 565 PKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVKLN 621 P D DY + ALS E+++KL +P L QAS+I G+T AA++LLL+++KK K+ Sbjct: 414 PDDLDYMQVAALSIEVRQKLQKHRPETLGQASRISGVTAAAISLLLVHLKKGGFKVG 470 Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 77/150 (51%), Positives = 99/150 (66%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNP+IGG+GKGHLV+E+D Sbjct: 5 QEFDVIVVGGGHAGTEAALAAARMGCKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR+LN KGPAVR R QADR LY+ A++R + +Q L + Q Sbjct: 65 ALGGAMALATDESGIQFRMLNSSKGPAVRATRAQADRVLYKAAIRRMLENQHQLWLFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLT 153 V E + ++ V R TVVLT Sbjct: 125 VDDLVLEGDRVAGAVTXVGITFRSRTVVLT 154 >gi|302845030|ref|XP_002954054.1| hypothetical protein VOLCADRAFT_121255 [Volvox carteri f. nagariensis] gi|300260553|gb|EFJ44771.1| hypothetical protein VOLCADRAFT_121255 [Volvox carteri f. nagariensis] Length = 686 Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 123/311 (39%), Positives = 190/311 (61%), Gaps = 4/311 (1%) Query: 308 NGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAG 367 G ST LPE +Q ++T+PGLE+V ++RP YA+EYDY+ + PTLETKK+ GLF +G Sbjct: 337 EGFSTGLPERLQLALLQTLPGLERVKMLRPAYAVEYDYLPAHQCHPTLETKKVQGLFFSG 396 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 Q+NGTTGYEEAA+QGLVAG+N+A ++ + R SY+G +IDDL +K + EPYRM Sbjct: 397 QLNGTTGYEEAASQGLVAGVNAAMRALGRPPVTLPRDSSYLGTLIDDLVTKDLREPYRML 456 Query: 428 TSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKN 487 TSR+EYR+ LR DNAD RLT +G ++G I +RR + F ++ L + + + + Sbjct: 457 TSRSEYRLLLRSDNADRRLTQLGREIGLIDDRRWRLFRDKQARIEAEKARLAACRIRADS 516 Query: 488 ---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPD-ARKFSSLVIERLQIESSYA 543 L++ ++S + T E L P L D + S E ++I+ YA Sbjct: 517 EAALAAAALSGHAVPSSLTLEELLRRPHVHYSILERHGLDGGSELSFAEREAVEIDIKYA 576 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 + RQ + + + +P D DYS++ LS E +EKL+ ++P ++ QAS+I G++P Sbjct: 577 GFIARQEKQLAAFSSKSSKPLPPDLDYSAISTLSLEAREKLNKIRPRDIGQASRIGGVSP 636 Query: 604 AALNLLLIYIK 614 A ++ LL++++ Sbjct: 637 ADVSALLVHLE 647 Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 95/217 (43%), Positives = 127/217 (58%), Gaps = 1/217 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+G GHAGCEAA AA+LG T L+T +G CNPA+GG K LV E+DAL Sbjct: 120 YDVIVVGAGHAGCEAALAAARLGCRTLLLTLNLDRVGWQPCNPAVGGPAKSQLVHEVDAL 179 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G +GR+AD +Q RVLN KGPAV R Q D+ Y M+R + Q+ L++ + V Sbjct: 180 GGEIGRMADRCYLQRRVLNRSKGPAVWALRAQTDKHEYSRTMRRVLEEQQGLEIREAMVV 239 Query: 126 GFNTEKNI-ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 G + N + + R VVLTTGTF+ G I +G+ + AGR G++ S L Sbjct: 240 GLDVGPNDEVRGVKTYFGITFRSRAVVLTTGTFMNGTIWVGRQSMSAGRAGEAASVGLTE 299 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADE 221 + F+T RLKTGTPAR+D +T+ + E Q +E Sbjct: 300 ALQSLGFETDRLKTGTPARIDARTVNFSVLEPQPGEE 336 >gi|18920704|gb|AAL82395.1|AF469111_1 MTO1 isoform 2 [Homo sapiens] Length = 313 Score = 227 bits (578), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 125/264 (47%), Positives = 169/264 (64%), Gaps = 11/264 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA+ G+ T L+TH+ TIG MSCNP+ GG+GKGHL+RE+DAL Sbjct: 37 FDVIVIGGGHAGTEAATAAARCGSRTLLLTHRVDTIGQMSCNPSFGGIGKGHLMREVDAL 96 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGL R+ D +G+ ++VLN +KGPAV G R Q DR+LY+ MQ+EIL+ L V +G V Sbjct: 97 DGLCSRICDQSGVHYKVLNRRKGPAVWGLRAQIDRKLYKQNMQKEILNTPLLTVQEGAVE 156 Query: 126 GF--------NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 +T K +S +V+ D S + +V+LTTGTFLRG+I IG PAGR+GD Sbjct: 157 DLILTEPEPEHTGKCRVSGVVLVDGSTVYAESVILTTGTFLRGMIVIGLETHPAGRLGDQ 216 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR- 236 PS L + K F GRLKTGTP R+ ++I + K D IPFSF + + + Sbjct: 217 PSIGLAQTLEKLGFVVGRLKTGTPPRIAKESINFSILNKHIPDNPSIPFSFTNETVWIKP 276 Query: 237 --QIECGITRTNLETHRIIMENIK 258 Q+ C +T TN I+++N++ Sbjct: 277 EDQLPCYLTHTNPRVDEIVLKNLQ 300 >gi|207108211|ref|ZP_03242373.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Helicobacter pylori HPKX_438_CA4C1] Length = 265 Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 115/262 (43%), Positives = 160/262 (61%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + D++V+GGGHAG EA+ +AAK+GA LIT TIG SCNPAIGGLGKGHL +E+D Sbjct: 3 KESDILVVGGGHAGIEASLIAAKMGARVHLITMLIDTIGLASCNPAIGGLGKGHLTKEVD 62 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 L G MG + D +G+Q+RVLN KGPAVRG R Q D + YR+ + +L+ NL V Q Sbjct: 63 VLGGAMGIITDHSGLQYRVLNASKGPAVRGTRAQIDMDTYRIFARNLVLNTPNLSVSQEM 122 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 + + + + N+ + V++TTGTFL+GV+HIG+ + GR G++ SNSL Sbjct: 123 TESLIIKNDEVVGVTTNINNTYKAKKVIITTGTFLKGVVHIGEHQNQNGRFGENASNSLA 182 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + F RLKTGT R+ G +I ++ E+ F D FS+ T Q+ C IT Sbjct: 183 LNLRDLGFKVDRLKTGTCPRVAGNSIDFEGLEEHFGDTNPPYFSYKTKDFNPTQLSCFIT 242 Query: 244 RTNLETHRIIMENIKHSAIYSG 265 TNL TH+II +N + ++SG Sbjct: 243 YTNLITHQIIRDNFHRAPLFSG 264 >gi|327282748|ref|XP_003226104.1| PREDICTED: protein MTO1 homolog, mitochondrial-like [Anolis carolinensis] Length = 571 Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 128/263 (48%), Positives = 173/263 (65%), Gaps = 11/263 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+VIGGGHAG +AAA AA+ GA T L+THK S IG MSCNP+ GG+GKGHLVRE+DAL Sbjct: 2 YDVVVIGGGHAGAKAAAAAARGGARTLLVTHKASGIGQMSCNPSFGGIGKGHLVREVDAL 61 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGL GR+ D +G+ ++VLN KGPAV G R Q DR+LY+ MQ+EI +L V + V Sbjct: 62 DGLCGRICDQSGVHYKVLNKGKGPAVWGLRAQIDRKLYKEKMQKEIFQITHLTVCEASVE 121 Query: 126 GF--------NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 + K +S ++++D + +VVLTTGTFLRG+I IG PAGRMGD Sbjct: 122 DLVLTEPELDHPGKCCVSGVILEDGRKVHAGSVVLTTGTFLRGMILIGLESYPAGRMGDR 181 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR- 236 PS L + F GRLKTGTP RL+ ++I ++ E+Q AD +PFSF+++ + + Sbjct: 182 PSIGLAQTLENLGFSLGRLKTGTPPRLEKESIDFNGLEQQTADSSPVPFSFLSEAVWIKP 241 Query: 237 --QIECGITRTNLETHRIIMENI 257 Q+ C +T TN + +II +N+ Sbjct: 242 EDQLSCYMTYTNPKVEQIIHDNL 264 Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 93/252 (36%), Positives = 148/252 (58%), Gaps = 10/252 (3%) Query: 381 QGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPD 440 QG++AGIN+ + SRT+ YIGV+IDDLT+ G EPYRMFTSR E+R+SLRPD Sbjct: 291 QGIIAGINAGLRVKGKPPFIVSRTEGYIGVLIDDLTTLGTNEPYRMFTSRVEFRMSLRPD 350 Query: 441 NADNRLTPIGM-KLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSS----TSISF 495 NAD+RLT G + GC+ + R ++ A+ LKS+ +S + +IS Sbjct: 351 NADSRLTFRGYNEAGCVSQHRYEQAAQMKAMIEEGMEALKSVQFSSTKWAQLVPEAAIS- 409 Query: 496 KQDGKTRTAYEFLSYPDFSIQNLFSICPDA-RKFSSL--VIERLQIESSYAAYTGRQMIE 552 Q +A + L Y +++ L PD+ +KF+ + +RL+IE+ Y + Q +E Sbjct: 410 TQRCSLSSALDLLQYQGVNMEVLAKAVPDSLKKFAEWQQLADRLKIEAVYGWHVSNQRLE 469 Query: 553 AKEIKFEEKRLIPKDFDYSSLPA-LSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLI 611 +E++ +E +P+D DY ++ A LS E++EKL +P + S+I G+TPAA+ LL Sbjct: 470 IEEVQRDEALKLPEDLDYFAINASLSQEVREKLDSHRPQTIGAVSRIPGITPAAVVNLLR 529 Query: 612 YIKKNTVKLNEI 623 ++K N ++ ++ Sbjct: 530 FVKINCKRMKDV 541 >gi|253795565|ref|YP_003038661.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Candidatus Hodgkinia cicadicola Dsem] gi|253739873|gb|ACT34208.1| putative glucose-inhibited division protein A [Candidatus Hodgkinia cicadicola Dsem] Length = 504 Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 125/403 (31%), Positives = 202/403 (50%), Gaps = 10/403 (2%) Query: 41 IGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADR 100 +G ++CNPA GG K HL+ E+ L G DA+ VL+ +G A R R Q D Sbjct: 39 VGKLACNPAFGGAAKSHLMCELACLGGKTPAAVDASAAHADVLSPNRGRAARALRLQVDS 98 Query: 101 ELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRG 160 +L++LA + + ++ E + + + + + D S I+ S +V+ TGTF RG Sbjct: 99 QLFKLATAS---ATAGVSKLKPEALSVSWRQQRVH-VALADGSWIQASALVIATGTFSRG 154 Query: 161 VIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIW-DKTEKQFA 219 V H+G+ + G++G S ++ L ++ + T R KTGTP + +++ W Q + Sbjct: 155 VCHVGECTLALGKIGASRADCLTSALRQHGVKTRRFKTGTPPWVLKQSVRWRSAISLQSS 214 Query: 220 DERLIPFSFMT-DKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSI 278 R + F + + + C T T +I + ++ +G + GP C SI Sbjct: 215 SFR---YCFGSRSRAAFPSLCCKTMHTRKPTSTVIASCTRWASPQAGKLLGRGPTRCTSI 271 Query: 279 EDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPG 338 E +I G R ++ +E EG+ VY NG T+LP E Q ++T+ L + G Sbjct: 272 ESRIASAGARP-QRLIMEAEGVAKQGVYLNGAFTSLPVEAQALALKTVGALTTAQFTKVG 330 Query: 339 YAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDC 398 YA+EYD + +L LE + +G+F+AGQ+ G+TGYEEA QG VAG+N+AR+ + Sbjct: 331 YAVEYDVVCSNQLSRALELARSAGVFVAGQLAGSTGYEEACVQGWVAGVNAARRCQNMPL 390 Query: 399 ICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDN 441 I S T S+ G++ +T + PY M R L+ N Sbjct: 391 IALSFTASFAGLLTFKMTQHALKAPYSMACESVPNRARLKQRN 433 >gi|34763616|ref|ZP_00144547.1| Glucose inhibited division protein A [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27886714|gb|EAA23856.1| Glucose inhibited division protein A [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 238 Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 111/232 (47%), Positives = 145/232 (62%), Gaps = 5/232 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +D+IV+G GHAGCEAA +A++G TA+ T TIG MSCNP++GG K HL REID Sbjct: 2 QEFDIIVVGAGHAGCEAALASARMGMKTAIFTISLDTIGVMSCNPSLGGPAKSHLAREID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G MGR D IQ RVLN +KGPAVR R QAD+ Y M++ + ENL VIQG Sbjct: 62 ALGGEMGRNIDKTFIQIRVLNTRKGPAVRSLRAQADKMAYANEMKKTLEHTENLSVIQGM 121 Query: 124 VAGFNTE----KNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 V+ E K +I I +++ R V++ TGTFLRG+IHIG++ AGRMG+ S Sbjct: 122 VSELIVEEENGKKVIKGIKIREGLEYRAKAVIVATGTFLRGLIHIGEINFSAGRMGELSS 181 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADE-RLIPFSFMT 230 L S K GR KTGTP R+DG+TI + E+Q D+ +++ FS T Sbjct: 182 EDLPLSLEKIGLKLGRFKTGTPTRIDGRTIDYSVLEEQPGDKSQVLKFSNRT 233 >gi|291333886|gb|ADD93567.1| hypothetical protein [uncultured marine bacterium MedDCM-OCT-S04-C293] Length = 225 Score = 204 bits (518), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 114/214 (53%), Positives = 145/214 (67%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALD 66 D+IVIGGGHAGCEAAA AA++G T LITHK TIG MSCNPAIGG+GK HLV+EIDA D Sbjct: 4 DIIVIGGGHAGCEAAAAAARIGVKTILITHKFETIGQMSCNPAIGGVGKSHLVKEIDAAD 63 Query: 67 GLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAG 126 G+M R AD A I +VLN KGPAVR R QADRELY+ ++Q+E+ S ENL++++GEV Sbjct: 64 GIMARCADRAAIHLKVLNSSKGPAVRATRAQADRELYKKSVQKELKSLENLEIVEGEVTD 123 Query: 127 FNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSF 186 + N I S+ + ++ +++ V+LTTGTFL G + G GR GD+ S L Sbjct: 124 LGIQNNQIGSVTVGESKILKAQKVILTTGTFLNGKLFTGMDNNEGGRAGDNSSKKLAEKL 183 Query: 187 MKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFAD 220 DF GRLKTGTP R+ +I W+ E+Q D Sbjct: 184 RNIDFSVGRLKTGTPPRIHKDSINWEILEEQKGD 217 >gi|255550540|ref|XP_002516320.1| glucose inhibited division protein A, putative [Ricinus communis] gi|223544550|gb|EEF46067.1| glucose inhibited division protein A, putative [Ricinus communis] Length = 319 Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 114/296 (38%), Positives = 180/296 (60%), Gaps = 12/296 (4%) Query: 334 IIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKS 393 ++RP YA+EYD++ + +L TKK+ GLF +GQINGTTGYEEAAAQG+++GIN+AR S Sbjct: 1 MLRPAYAVEYDFLPAHQCSRSLMTKKVEGLFFSGQINGTTGYEEAAAQGIISGINAARHS 60 Query: 394 NKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKL 453 + I R SYIG +IDDL +K + EPYR+ TSR+E+R+ LR DNAD+RLTP+G ++ Sbjct: 61 DGKPLIVLERESSYIGTLIDDLITKDLREPYRVLTSRSEHRLLLRSDNADSRLTPLGHEI 120 Query: 454 GCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSS--TSISFKQDGKTRTAYEFLSYP 511 G I +RR + + + LK++ ++ L++ T +S + + T L P Sbjct: 121 GLIDDRRWGLYQDKQARISEEKKRLKTVRISGGELAADVTCLSRQPVKGSSTLESLLKKP 180 Query: 512 DFSIQNLFSICPDARKFSSLVIER-----LQIESSYAAYTGRQMIEAKEIKFEEKRLIPK 566 + L D F + ++ R ++I+ Y + RQ I+ +++ ++ R +P+ Sbjct: 181 HIQYRVL-----DKHGFGNELLSREEKECVEIDIKYEGFIIRQQIQLQQMAHQQNRPLPE 235 Query: 567 DFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVKLNE 622 D DY ++ LS E +EKLS ++P + QAS+I G++PA + LLI ++ N K E Sbjct: 236 DLDYYAMTTLSLEAREKLSKVRPQTIGQASRIAGVSPADITALLIILEANRRKAQE 291 >gi|62719473|gb|AAX93337.1| glucose-inhibited division protein A GidA [Lactobacillus sanfranciscensis] Length = 226 Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 99/224 (44%), Positives = 141/224 (62%), Gaps = 4/224 (1%) Query: 132 NIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDF 191 N + ++ ++ TVVL TGT RG I+IG+L+ +G PS L + K F Sbjct: 2 NRVEGVITNTGAIYHAKTVVLATGTSARGQIYIGELRYSSGPNNSLPSIKLSENLEKNGF 61 Query: 192 DTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT---DKI-TNRQIECGITRTNL 247 + R KTGTP R++G TI E+Q DE+ FSFMT D + + QI C +T TN Sbjct: 62 NLERFKTGTPPRVNGNTIDHSGIEEQPGDEKPHHFSFMTPYSDYLPVSEQISCWLTYTNP 121 Query: 248 ETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYP 307 TH+II +N+ S +++G I GPRYCPSIEDK+VRF +++ HQ+FLEPEG D Y Sbjct: 122 TTHQIIRDNLDRSPLFNGVIDGIGPRYCPSIEDKVVRFADKDRHQVFLEPEGRGNDEWYV 181 Query: 308 NGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKEL 351 +G+S ++PEE+Q + + +I GLE ++RPGYAIEYD I P+++ Sbjct: 182 DGMSNSMPEELQQEMLHSIKGLENAKMMRPGYAIEYDIIPPQQM 225 >gi|218659968|ref|ZP_03515898.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rhizobium etli IE4771] Length = 207 Score = 195 bits (495), Expect = 2e-47, Method: Composition-based stats. Identities = 97/200 (48%), Positives = 132/200 (66%), Gaps = 1/200 (0%) Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 GV EPYRMFTSRAEYR++LR DNAD RLTP+GM+LGC+ R++RF Y E R+ L Sbjct: 1 GVTEPYRMFTSRAEYRLTLRADNADARLTPLGMRLGCVSSARERRFTVYQAEVEAGRAQL 60 Query: 479 KSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDAR-KFSSLVIERLQ 537 SL +T ++ DG+ RTAY+ LSYPD+ L + PDA V E L+ Sbjct: 61 MSLKVTPNEARRAGLNINLDGQRRTAYDLLSYPDYDFAALRRVWPDALGAIRPTVAEALE 120 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 IE+ Y+ Y RQ + + +E+R IP DFDYS+L LSNELK KLS +PF++ QA+ Sbjct: 121 IEAGYSVYLDRQAAAIADQQRDEERRIPDDFDYSALSGLSNELKTKLSAARPFSVAQAAI 180 Query: 598 IEGMTPAALNLLLIYIKKNT 617 +EGMTPAA+ LLL+++++ + Sbjct: 181 VEGMTPAAIALLLVHLRRRS 200 >gi|325116388|emb|CBZ51941.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA, related [Neospora caninum Liverpool] Length = 819 Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 103/249 (41%), Positives = 145/249 (58%), Gaps = 11/249 (4%) Query: 165 GKLKIPAGRMGDSP----SNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFAD 220 G PA R SP ++ L S F GR KTGTPARL ++ + ++Q +D Sbjct: 353 GSACSPARREESSPQEKSASELSASLRSLGFALGRFKTGTPARLYRHSVDFGSLQEQPSD 412 Query: 221 ERLIPFSFMTD-----KITNRQIECGITRTNLETHRIIMENIKHSAIYSGD--IKSYGPR 273 PFSF+ K+ + C +T TN ETH I+ ++ +SG + GPR Sbjct: 413 RSPSPFSFLNSPSRLLKVHPSTVSCHLTYTNRETHAIVRSHLDELPEHSGGEGRRGLGPR 472 Query: 274 YCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVN 333 YCPSI K++RF +R H ++LEPEG ++ ++YPNG+S A Q +R+I GLE V Sbjct: 473 YCPSIATKVLRFPDRPRHAVWLEPEGRDSPLIYPNGLSGAFSPATQLALLRSIKGLENVE 532 Query: 334 IIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKS 393 + P Y +EYD++ P L +LETK ++GLFLAGQ+ GTTGYEEAAA GL+AG N+A ++ Sbjct: 533 MSAPAYDVEYDFVWPSSLSISLETKAVAGLFLAGQVIGTTGYEEAAAMGLLAGWNAALRA 592 Query: 394 NKLDCICFS 402 + C S Sbjct: 593 LRDKTRCAS 601 Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 59/120 (49%), Positives = 80/120 (66%), Gaps = 4/120 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DV V+G GHAG EAA +A++GA T L+T T+G +SCNP+IGG+GKG LV E+DA Sbjct: 42 FDVCVVGAGHAGLEAALASARVGALTLLVTQSVRTLGELSCNPSIGGIGKGTLVSEVDAF 101 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G +GR AD A I +RVLN +GPA G R Q DR++Y+ + E+ + V +GE A Sbjct: 102 GGGIGRWADQAAIHWRVLNASRGPATWGVRAQIDRKIYKRVVGNEVRDR----VARGEFA 157 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 40/108 (37%), Positives = 58/108 (53%), Gaps = 15/108 (13%) Query: 399 ICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGE 458 I +R IGV DLT GV EPYRMF SR+E R+S RPDNAD R ++ G + + Sbjct: 693 ISLNREKFLIGVCAHDLTQTGVEEPYRMFASRSECRLSTRPDNADFRCIDTALRGGIVRD 752 Query: 459 -------RRQKRFAKYIQEYNFLR------SLLKSLVLTSKNLSSTSI 493 RR+++ A+ + +FLR S +S +L+S +S+ Sbjct: 753 AERIESTRRRRQKAESL--LHFLRPRFDVVSCKRSFLLSSTAYPVSSL 798 >gi|258626071|ref|ZP_05720922.1| conserved hypothetical protein [Vibrio mimicus VM603] gi|258581597|gb|EEW06495.1| conserved hypothetical protein [Vibrio mimicus VM603] Length = 253 Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 104/217 (47%), Positives = 131/217 (60%), Gaps = 3/217 (1%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA AA+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHETFDVIVVGGGHAGTEAALAAARTGQRTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRSVLENTPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + I +V Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQAVDDVIVENDHIRGVVTQMGLKFHAKAVVLTVGTFLGGKIHIGLENFAGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTII---WDKT 214 +L + + F RLKTGTP L +I W ++ Sbjct: 182 ALAHRLRELPFRVDRLKTGTPHVLTPIVLISRFWKRS 218 >gi|167951233|ref|ZP_02538307.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 240 Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 98/193 (50%), Positives = 122/193 (63%) Query: 17 GCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAA 76 G EAA AA++GA T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL G+M D Sbjct: 6 GTEAALAAARMGARTLLLTHNIETLGQMSCNPAIGGIGKGHLVKEVDALGGVMAHATDLG 65 Query: 77 GIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISS 136 GIQFR+LN +KGPAVR R QADR Y+ A++ + +Q NL + Q V E+N + Sbjct: 66 GIQFRILNSRKGPAVRATRAQADRLRYKAAIRHTLENQPNLQLFQQAVDDLLVEQNRVVG 125 Query: 137 IVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRL 196 + Q R VVLT GTFL G IHIG GR GD P+N+L + F RL Sbjct: 126 VTTQMGLKFRSRAVVLTVGTFLSGRIHIGLSNHQGGRAGDPPANALAQRLREQPFTVERL 185 Query: 197 KTGTPARLDGKTI 209 KTGTP R+DG+TI Sbjct: 186 KTGTPPRIDGRTI 198 >gi|7145094|gb|AAA24250.2| 21K protein [Escherichia coli] gi|223849|prf||1002215C protein 21kD Length = 196 Score = 187 bits (474), Expect = 7e-45, Method: Composition-based stats. Identities = 99/190 (52%), Positives = 118/190 (62%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGR 195 + GR Sbjct: 187 LRELPLRVGR 196 >gi|205371920|ref|ZP_03224740.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus coahuilensis m4-4] Length = 283 Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 103/266 (38%), Positives = 161/266 (60%), Gaps = 7/266 (2%) Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 KK L+ AGQINGT+GYEEAA QGL+AG+N+A + D + SR+D+YIGV+IDDL + Sbjct: 13 KKYKNLYTAGQINGTSGYEEAAGQGLIAGLNAALNALGKDQLILSRSDAYIGVLIDDLIT 72 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYI----QEYNF 473 KG EPYR+ TSRAEYR+ LR DNAD RLT IG ++G I + R RF + +E Sbjct: 73 KGTNEPYRLLTSRAEYRLLLRHDNADLRLTEIGHRVGLISDERYDRFLEKKRLIEEEMAR 132 Query: 474 LRSL-LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV 532 L S+ +K V T + S +DG A + L P+ +++ + + + + Sbjct: 133 LSSIRIKPTVATQTLIREVGGSELKDGI--LASDLLKRPEMEYRHIEQLTASTVELTDDI 190 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 E+++I+ Y Y + + + +K E + IP DY ++ L++E ++KL ++P ++ Sbjct: 191 KEQVEIQLKYEGYIEKSLQQVDRLKKMENKKIPDLIDYDAINGLASEARQKLKEVRPLSI 250 Query: 593 LQASKIEGMTPAALNLLLIYIKKNTV 618 QAS+I G+ PA +++LL+YI++ V Sbjct: 251 AQASRISGVNPADISILLVYIEQGKV 276 >gi|237834887|ref|XP_002366741.1| glucose inhibited division protein A, putative [Toxoplasma gondii ME49] gi|211964405|gb|EEA99600.1| glucose inhibited division protein A, putative [Toxoplasma gondii ME49] Length = 1405 Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 111/301 (36%), Positives = 157/301 (52%), Gaps = 60/301 (19%) Query: 149 TVVLTTGTFLRGVIHIGK-LKIPAGRMGDS---------PSNS----------------- 181 T+V+T GTFL+G G + + AGR+G + PS+S Sbjct: 570 TIVVTAGTFLKGKCSTGTTVAVDAGRLGSAFPSSFCSPIPSSSVSAVSTGSSVFERKERS 629 Query: 182 -------------------------LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEK 216 L S GR KTGTPARL +I + + ++ Sbjct: 630 IRGGKRPCSQLAETEALSSEQSASELAASLRDLGLPMGRFKTGTPARLYRHSIDFSRLQE 689 Query: 217 QFADERLIPFSFMTDKITNRQ-----IECGITRTNLETHRIIMENIKHSAIYSGD--IKS 269 Q E PFSF+ R+ + C +T TN ETH I+ +++ +SG + Sbjct: 690 Q-PSECPSPFSFLHSPSRLRELRPVTVSCFLTYTNRETHEIVRRHLEELPRHSGGEGRRG 748 Query: 270 YGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGL 329 GPRYCPSI K++RF +R H ++LEPEGL++ ++YPNG+S A Q +R+I GL Sbjct: 749 LGPRYCPSIATKVLRFPDRPRHAVWLEPEGLDSALIYPNGLSGAFSPPTQLSLLRSIRGL 808 Query: 330 EKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINS 389 E V + P Y +EYD++ P L +LETK ++GLF+AGQ+ GTTGYEEAAA GL+AG N+ Sbjct: 809 ENVEMAAPAYDVEYDFVVPASLSISLETKTVAGLFVAGQVLGTTGYEEAAAMGLLAGWNA 868 Query: 390 A 390 A Sbjct: 869 A 869 Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 63/113 (55%), Positives = 81/113 (71%), Gaps = 2/113 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DV V+G GHAG EAA +A++GAST L+T T+G +SCNP+IGG+GKG LV E+DAL Sbjct: 330 FDVCVVGAGHAGLEAALASARVGASTLLVTQSVRTLGELSCNPSIGGIGKGTLVSEVDAL 389 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLD 118 G +GR AD A I +RVLN +GPA G R Q DRELY+ + RE+ QE +D Sbjct: 390 GGGIGRWADQAAIHWRVLNASRGPATWGVRAQIDRELYKGVVTREV--QERVD 440 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 29/58 (50%), Positives = 35/58 (60%) Query: 399 ICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCI 456 I SR +GV DLT GV EPYRMF SR+E R+S RPDNAD R ++ G + Sbjct: 1004 ISLSREKFLLGVCAHDLTQIGVQEPYRMFASRSECRLSTRPDNADLRCIDTALRGGIV 1061 >gi|221503461|gb|EEE29152.1| glucose inhibited division protein A, putative [Toxoplasma gondii VEG] Length = 1408 Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 111/301 (36%), Positives = 157/301 (52%), Gaps = 60/301 (19%) Query: 149 TVVLTTGTFLRGVIHIGK-LKIPAGRMGDS---------PSNS----------------- 181 T+V+T GTFL+G G + + AGR+G + PS+S Sbjct: 570 TIVVTAGTFLKGKCSTGTTVAVDAGRLGSAFPSSFCSPIPSSSVSAVSTGSSVFERKERS 629 Query: 182 -------------------------LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEK 216 L S GR KTGTPARL +I + + ++ Sbjct: 630 IRGGKRPCSQLAETEALSSEQSASELAASLRDLGLPMGRFKTGTPARLYRHSIDFSRLQE 689 Query: 217 QFADERLIPFSFMTDKITNRQ-----IECGITRTNLETHRIIMENIKHSAIYSGD--IKS 269 Q E PFSF+ R+ + C +T TN ETH I+ +++ +SG + Sbjct: 690 Q-PSECPSPFSFLHSPSRLRELRPVTVSCFLTYTNRETHEIVRRHLEELPRHSGGEGRRG 748 Query: 270 YGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGL 329 GPRYCPSI K++RF +R H ++LEPEGL++ ++YPNG+S A Q +R+I GL Sbjct: 749 LGPRYCPSIATKVLRFPDRPRHAVWLEPEGLDSALIYPNGLSGAFSPPTQLSLLRSIRGL 808 Query: 330 EKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINS 389 E V + P Y +EYD++ P L +LETK ++GLF+AGQ+ GTTGYEEAAA GL+AG N+ Sbjct: 809 ENVEMAAPAYDVEYDFVVPASLSISLETKTVAGLFVAGQVLGTTGYEEAAAMGLLAGWNA 868 Query: 390 A 390 A Sbjct: 869 A 869 Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 63/113 (55%), Positives = 81/113 (71%), Gaps = 2/113 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DV V+G GHAG EAA +A++GAST L+T T+G +SCNP+IGG+GKG LV E+DAL Sbjct: 330 FDVCVVGAGHAGLEAALASARVGASTLLVTQSVRTLGELSCNPSIGGIGKGTLVSEVDAL 389 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLD 118 G +GR AD A I +RVLN +GPA G R Q DRELY+ + RE+ QE +D Sbjct: 390 GGGIGRWADQAAIHWRVLNASRGPATWGVRAQIDRELYKGVVTREV--QERVD 440 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 29/58 (50%), Positives = 35/58 (60%) Query: 399 ICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCI 456 I SR +GV DLT GV EPYRMF SR+E R+S RPDNAD R ++ G + Sbjct: 1004 ISLSREKFLLGVCAHDLTQIGVQEPYRMFASRSECRLSTRPDNADLRCIDTALRGGIV 1061 >gi|289808379|ref|ZP_06539008.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 190 Score = 181 bits (458), Expect = 4e-43, Method: Composition-based stats. Identities = 94/174 (54%), Positives = 113/174 (64%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNP IGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPTIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQF++LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFKILNASKGPAVRATRAQADRVLYRQAVRIALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 E + + V Q R VVLT GTFL G IHIG GR GD PS Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPS 180 >gi|58257970|gb|AAW69380.1| glucose-inhibited division protein [Hydrogenobacter hydrogenophilus] Length = 156 Score = 172 bits (437), Expect = 1e-40, Method: Composition-based stats. Identities = 84/155 (54%), Positives = 106/155 (68%), Gaps = 7/155 (4%) Query: 197 KTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-------QIECGITRTNLET 249 KTGTPARLD +TI + E DE FSF TD + Q+ C IT T +T Sbjct: 1 KTGTPARLDKRTIDFSALEVAPGDEPPPKFSFWTDPVGTYWFSKGKPQVNCWITYTTPKT 60 Query: 250 HRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNG 309 H II +N+ +A+Y G IK GPRYCPSIEDK+V+F ++ HQIFLEPEG +T +YPNG Sbjct: 61 HEIIRKNLHRTALYGGLIKGIGPRYCPSIEDKVVKFPDKERHQIFLEPEGWDTIEIYPNG 120 Query: 310 ISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYD 344 +ST+LPEEIQ + R+IPGLEKV +IRP +AIEY+ Sbjct: 121 LSTSLPEEIQWELYRSIPGLEKVELIRPAHAIEYE 155 >gi|167951232|ref|ZP_02538306.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 158 Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 76/124 (61%), Positives = 99/124 (79%) Query: 257 IKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPE 316 + S +++G I+ GPRYCPSIEDK+VRF +++ HQIF+EPEGL+T VYPNGIST+LP Sbjct: 1 MSRSPLFTGVIEGTGPRYCPSIEDKVVRFADKDSHQIFIEPEGLDTHEVYPNGISTSLPF 60 Query: 317 EIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYE 376 ++Q Q +R++ G K +I RPGYAIEYD+ +P+EL +LET I+GLF AGQINGTTGYE Sbjct: 61 DVQLQLVRSMKGFAKAHITRPGYAIEYDFFDPRELKSSLETNHIAGLFFAGQINGTTGYE 120 Query: 377 EAAA 380 EAA Sbjct: 121 EAAG 124 >gi|213583207|ref|ZP_03365033.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 165 Score = 170 bits (430), Expect = 7e-40, Method: Composition-based stats. Identities = 87/159 (54%), Positives = 106/159 (66%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNP IGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPTIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQF++LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFKILNASKGPAVRATRAQADRVLYRQAVRIALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHI 164 E + + V Q R VVLT GTFL G IHI Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHI 165 >gi|260890890|ref|ZP_05902153.1| glucose inhibited division protein A [Leptotrichia hofstadii F0254] gi|260859443|gb|EEX73943.1| glucose inhibited division protein A [Leptotrichia hofstadii F0254] Length = 264 Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 99/249 (39%), Positives = 141/249 (56%), Gaps = 4/249 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YD+IV+G GHAG EAA VAA+ G TAL T I MSCNP++GG GK HLV E+ Sbjct: 2 KNYDIIVVGAGHAGVEAALVAARHGLKTALFTIYLDNIAMMSCNPSVGGPGKSHLVSELG 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 L G M R D +Q + LN KG A R R QAD+ YR+ M+ I QENLD++QG Sbjct: 62 MLGGEMARHIDNYNLQLKNLNHTKGLASRITRAQADKYWYRIKMREIIEKQENLDLVQGI 121 Query: 124 VAGFNTEKNIISSIVMQDNSMIR--CSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E + + +DN I+ VVL TGTFL G +G +K +GR G+ S Sbjct: 122 VVDLIVENKKVMGV--EDNLGIKYGAKAVVLCTGTFLGGEYVMGDVKYSSGRQGEPASVD 179 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L + +++ F+ R +T TP R+ +I + KTE+ +++ FS+ T K R + G Sbjct: 180 LPDRLVEYGFELDRYQTATPPRIAKSSIDFSKTEELKGEDKPRYFSYETKKNIIRLYQLG 239 Query: 242 ITRTNLETH 250 + +L+ + Sbjct: 240 LHSQHLKQY 248 >gi|153827656|ref|ZP_01980323.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae MZO-2] gi|149737869|gb|EDM52774.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae MZO-2] Length = 174 Score = 168 bits (425), Expect = 3e-39, Method: Composition-based stats. Identities = 86/165 (52%), Positives = 107/165 (64%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA AA+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHETFDVIVVGGGHAGTEAALAAARTGQRTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRNVLENTPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIG 165 Q V E + I +V Q VVLT GTFL G IHIG Sbjct: 122 QQAVDDVIVEHDHIRGVVTQMGLKFHAKAVVLTVGTFLGGKIHIG 166 >gi|68061731|ref|XP_672866.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56490284|emb|CAI01577.1| hypothetical protein PB300279.00.0 [Plasmodium berghei] Length = 378 Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 95/199 (47%), Positives = 123/199 (61%), Gaps = 20/199 (10%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIGGGH GCEA+ ++AKLGA T LIT +IG MSCNP+IGG+GKG LV+EID Sbjct: 44 KKYDVIVIGGGHGGCEASYISAKLGAKTLLITQCKESIGEMSCNPSIGGIGKGILVKEID 103 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL GLMG+V D +GI F++LN+KKG AVRG R QADR+LY M+ + + NL +++ Sbjct: 104 ALGGLMGKVIDKSGIHFKILNLKKGLAVRGHRAQADRDLYNYYMKEYMFNMPNLYILENT 163 Query: 124 VAGFNTEKNII--SSIVMQDNSMI--------RCS------TVVLTTGTFLRGVIHIGKL 167 E ++ S M++ +CS V+LTTGTFL G+ HIGK Sbjct: 164 AHSLLIENSMTRNDSTNMEEKKKCKYVYGIKNKCSCEFYADNVILTTGTFLGGICHIGKD 223 Query: 168 KIPAGR----MGDSPSNSL 182 K GR +G N L Sbjct: 224 KYKGGRIKRILGKGKDNQL 242 Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 2/68 (2%) Query: 190 DFDTGRLKTGTPARLDGKTIIWDKTEKQFADERL-IPFSFMTDKITN-RQIECGITRTNL 247 +F+ R+KTGT RL +I +D EK+ +++ FSF+ DKI N + + T T L Sbjct: 307 NFEIKRMKTGTRPRLCKNSINFDILEKEGTEKKHPFYFSFLNDKIHNSKTLPSYKTYTKL 366 Query: 248 ETHRIIME 255 +TH ++++ Sbjct: 367 KTHELVIK 374 >gi|255025464|ref|ZP_05297450.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes FSL J2-003] Length = 255 Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 89/249 (35%), Positives = 144/249 (57%), Gaps = 7/249 (2%) Query: 375 YEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYR 434 YEEAA QGL+AGIN+ARK + + + R +YIGV+IDDL +KG EPYR+ TSRAEYR Sbjct: 1 YEEAAGQGLMAGINAARKVFEKEPVILGRDQAYIGVLIDDLVTKGTEEPYRLLTSRAEYR 60 Query: 435 ISLRPDNADNRLTPIGMKLGCIGERRQKRF-----AKYIQEYNFLRSLLKSLVLTSKNLS 489 + LR DNAD RLT IG ++G I + R +RF A ++ ++ +K L Sbjct: 61 LLLRHDNADLRLTEIGHEIGLISDERYERFLAKQSAIEAEKERLQKTRIKPTAEVQAMLK 120 Query: 490 STSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQ 549 +DG A + L P+ + + I + + E+++I+ Y Y + Sbjct: 121 EIGSGELKDGI--LAADLLRRPEITYDKIAQIVSRETFVTDEIAEQVEIQIKYEGYIQKS 178 Query: 550 MIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLL 609 ++ +++K E + IP++ DY ++ L+ E EKL ++P ++ QAS+I G+ PA +++L Sbjct: 179 NLQVEKMKRMEDKKIPENIDYDAISGLATEALEKLKKIEPLSIAQASRISGVNPADISIL 238 Query: 610 LIYIKKNTV 618 L+YI++ + Sbjct: 239 LVYIEQGKI 247 >gi|258642561|gb|ACV85893.1| mitochondrial translation optimization protein [Aspergillus flavus] gi|258642565|gb|ACV85895.1| mitochondrial translation optimization protein [Aspergillus flavus] gi|258642593|gb|ACV85909.1| mitochondrial translation optimization protein [Aspergillus oryzae] gi|258642595|gb|ACV85910.1| mitochondrial translation optimization protein [Aspergillus parasiticus] gi|258642597|gb|ACV85911.1| mitochondrial translation optimization protein [Aspergillus parasiticus] gi|258642601|gb|ACV85913.1| mitochondrial translation optimization protein [Aspergillus subolivaceus] gi|258642619|gb|ACV85922.1| mitochondrial translation optimization protein [Aspergillus wentii] Length = 171 Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 82/170 (48%), Positives = 108/170 (63%), Gaps = 10/170 (5%) Query: 42 GSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRE 101 G SCNP+ GG+GKG ++RE+DA+DG+ GR+ D AGI FR+LN KGPAV GPR Q DR+ Sbjct: 1 GVCSCNPSFGGIGKGTMIREVDAMDGVAGRIIDKAGIMFRILNRSKGPAVWGPRAQIDRD 60 Query: 102 LYRLAMQREILSQENLDVIQGEVAGFNTEK----------NIISSIVMQDNSMIRCSTVV 151 LY+ MQ E+L+ E L V++G+VA K I + ++ +I S VV Sbjct: 61 LYKKYMQEELLATEGLSVLEGKVADIVVSKEGVEDVPGAQGKIVGVRLESGEVIPTSRVV 120 Query: 152 LTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTP 201 +TTGTFL G IHIG P+GRMG++ + L S + F GRLKTGTP Sbjct: 121 ITTGTFLGGEIHIGMTVYPSGRMGEAATFGLSKSLREAGFQLGRLKTGTP 170 >gi|258642559|gb|ACV85892.1| mitochondrial translation optimization protein [Aspergillus cristatus] gi|258642603|gb|ACV85914.1| mitochondrial translation optimization protein [Aspergillus tamarii] Length = 171 Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 82/170 (48%), Positives = 108/170 (63%), Gaps = 10/170 (5%) Query: 42 GSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRE 101 G SCNP+ GG+GKG ++RE+DA+DG+ GR+ D AGI FR+LN KGPAV GPR Q DR+ Sbjct: 1 GVCSCNPSFGGIGKGTMIREVDAMDGVAGRIIDKAGIMFRILNRSKGPAVWGPRAQIDRD 60 Query: 102 LYRLAMQREILSQENLDVIQGEVAGFNTEK----------NIISSIVMQDNSMIRCSTVV 151 LY+ MQ E+L+ E L V++G+VA K I + ++ +I S VV Sbjct: 61 LYKRYMQEELLATEGLSVLEGKVADIVVSKEGVEDVPGAQGKIVGVRLESGEVIPTSRVV 120 Query: 152 LTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTP 201 +TTGTFL G IHIG P+GRMG++ + L S + F GRLKTGTP Sbjct: 121 ITTGTFLGGEIHIGMTVYPSGRMGEAATFGLSKSLREAGFQLGRLKTGTP 170 >gi|258642549|gb|ACV85887.1| mitochondrial translation optimization protein [Aspergillus brunneo-uniseriatus] gi|258642569|gb|ACV85897.1| mitochondrial translation optimization protein [Aspergillus fumigatus] gi|258642571|gb|ACV85898.1| mitochondrial translation optimization protein [Aspergillus fumigatus] gi|258642573|gb|ACV85899.1| mitochondrial translation optimization protein [Aspergillus fumigatus] Length = 171 Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 83/170 (48%), Positives = 109/170 (64%), Gaps = 10/170 (5%) Query: 42 GSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRE 101 G SCNP+ GG+GKG ++REIDA+DG+ GR+ D AGI FR+LN KGPAV GPR Q DR+ Sbjct: 1 GVCSCNPSFGGIGKGTMIREIDAMDGVAGRIIDKAGIMFRILNRSKGPAVWGPRAQIDRD 60 Query: 102 LYRLAMQREILSQENLDVIQGEVAGFNTEK----NI------ISSIVMQDNSMIRCSTVV 151 LY+ MQ E+L+ E L +++G+VA K NI I + ++ +I VV Sbjct: 61 LYKRYMQEELLATEGLSIVEGKVADIVVSKEGVENIPGSQGKIVGVRLESGEVIPTGRVV 120 Query: 152 LTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTP 201 +TTGTFL G IHIG P+GRMG++ + L S + F GRLKTGTP Sbjct: 121 ITTGTFLGGEIHIGLEAYPSGRMGEAATFGLSKSLREAGFQLGRLKTGTP 170 >gi|258642583|gb|ACV85904.1| mitochondrial translation optimization protein [Emericella nidulans] Length = 172 Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 81/171 (47%), Positives = 109/171 (63%), Gaps = 11/171 (6%) Query: 42 GSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRE 101 G SCNP+ GG+GKG ++REIDA+DG+ GR+ D AG+ F VLN KGPAV GPR Q DRE Sbjct: 1 GVCSCNPSFGGIGKGTMIREIDAMDGVAGRIVDKAGLMFMVLNRSKGPAVWGPRAQIDRE 60 Query: 102 LYRLAMQREILSQENLDVIQGEVA-----------GFNTEKNIISSIVMQDNSMIRCSTV 150 LY++ M+ E+L+ ENL +++G+VA G I + ++ +I S V Sbjct: 61 LYKIYMREELLATENLSIVEGKVADIVISKEDVGTGPAAPAGKIVGVRLETGEVIPTSRV 120 Query: 151 VLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTP 201 V+TTGTFL G IHIG P+GR+G++ + L S + F GRLKTGTP Sbjct: 121 VITTGTFLGGEIHIGLKAYPSGRIGEAATFGLSKSLREAGFQLGRLKTGTP 171 >gi|258642575|gb|ACV85900.1| mitochondrial translation optimization protein [Aspergillus fumigatus] Length = 171 Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 83/170 (48%), Positives = 109/170 (64%), Gaps = 10/170 (5%) Query: 42 GSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRE 101 G SCNP+ GG+GKG ++REIDA+DG+ GR+ D AGI FR+LN KGPAV GPR Q DR+ Sbjct: 1 GVCSCNPSFGGIGKGTMIREIDAMDGVAGRIIDRAGIMFRILNRSKGPAVWGPRAQIDRD 60 Query: 102 LYRLAMQREILSQENLDVIQGEVAGFNTEK----NI------ISSIVMQDNSMIRCSTVV 151 LY+ MQ E+L+ E L +++G+VA K NI I + ++ +I VV Sbjct: 61 LYKRYMQEELLATEGLSIVEGKVADIVVSKEGVENIPGSQGKIVGVRLESGEVIPTGRVV 120 Query: 152 LTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTP 201 +TTGTFL G IHIG P+GRMG++ + L S + F GRLKTGTP Sbjct: 121 ITTGTFLGGEIHIGLEAYPSGRMGEAATFGLSKSLREAGFQLGRLKTGTP 170 >gi|258642557|gb|ACV85891.1| mitochondrial translation optimization protein [Aspergillus clavatus] Length = 171 Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 82/170 (48%), Positives = 109/170 (64%), Gaps = 10/170 (5%) Query: 42 GSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRE 101 G SCNP+ GG+GKG ++REIDA+DG+ GR+ D AGI FRVLN KGPAV GPR Q DR+ Sbjct: 1 GVCSCNPSFGGIGKGTMIREIDAMDGVAGRIIDRAGIMFRVLNRSKGPAVWGPRAQIDRD 60 Query: 102 LYRLAMQREILSQENLDVIQGEVAGFNTEK----NI------ISSIVMQDNSMIRCSTVV 151 LY+ MQ E+++ E L +++G+VA K N+ I + ++ +I VV Sbjct: 61 LYKTYMQEELVATEGLSIVEGKVADIVVSKEGVENVPGAQGKIVGVRLESGEVIPTGRVV 120 Query: 152 LTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTP 201 +TTGTFL G IHIG P+GRMG++ + L S + F GRLKTGTP Sbjct: 121 ITTGTFLGGEIHIGLEAYPSGRMGEAATFGLSKSLHEAGFQLGRLKTGTP 170 >gi|258642563|gb|ACV85894.1| mitochondrial translation optimization protein [Aspergillus flavus] Length = 171 Score = 157 bits (398), Expect = 4e-36, Method: Composition-based stats. Identities = 81/170 (47%), Positives = 107/170 (62%), Gaps = 10/170 (5%) Query: 42 GSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRE 101 G SCNP+ GG+GKG ++RE+DA+DG+ GR+ D AGI FR+ N KGPAV GPR Q DR+ Sbjct: 1 GVCSCNPSFGGIGKGTMIREVDAMDGVAGRIIDKAGIMFRIPNRSKGPAVWGPRAQIDRD 60 Query: 102 LYRLAMQREILSQENLDVIQGEVAGFNTEKN----------IISSIVMQDNSMIRCSTVV 151 LY+ MQ E+L+ E L V++G+VA K I + ++ +I S VV Sbjct: 61 LYKKYMQEELLATEGLSVLEGKVADIVVSKEGVEDVPGAQGKIVGVRLESGEVIPTSRVV 120 Query: 152 LTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTP 201 +TTGTFL G IHIG P+GRMG++ + L S + F GRLKTGTP Sbjct: 121 ITTGTFLGGEIHIGMTVYPSGRMGEAATFGLSKSLREAGFQLGRLKTGTP 170 >gi|258642581|gb|ACV85903.1| mitochondrial translation optimization protein [Emericella nidulans] Length = 172 Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 81/171 (47%), Positives = 108/171 (63%), Gaps = 11/171 (6%) Query: 42 GSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRE 101 G SCNP+ GG+GKG ++REIDA+DG+ GR+ D AG+ F VLN KGPAV GPR Q DRE Sbjct: 1 GVCSCNPSFGGIGKGTMIREIDAMDGVAGRIVDKAGLMFMVLNRSKGPAVWGPRAQIDRE 60 Query: 102 LYRLAMQREILSQENLDVIQGEVA-----------GFNTEKNIISSIVMQDNSMIRCSTV 150 LY+ M+ E+L+ ENL +++G+VA G I + ++ +I S V Sbjct: 61 LYKNYMREELLATENLSIVEGKVADIVISKEDVGTGPAAPAGKIVGVRLETGEVIPTSRV 120 Query: 151 VLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTP 201 V+TTGTFL G IHIG P+GR+G++ + L S + F GRLKTGTP Sbjct: 121 VITTGTFLGGEIHIGLKAYPSGRIGEAATFGLSKSLREAGFQLGRLKTGTP 171 >gi|99034142|ref|ZP_01314238.1| hypothetical protein Wendoof_01000970 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 256 Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 90/244 (36%), Positives = 130/244 (53%), Gaps = 16/244 (6%) Query: 393 SNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMK 452 S K + RTDSYIGVMIDDL KGV+E YR+FTSRAEYR+++R DNAD RLT G Sbjct: 8 SEKKESFVLHRTDSYIGVMIDDLVIKGVIELYRLFTSRAEYRLAIRSDNADRRLTQKGYD 67 Query: 453 LGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPD 512 + + R ++ L L SL +T + L S I DG +TA + LSYP+ Sbjct: 68 ISLVSHERYSVLQNKLESIKQLEEKLGSLTITPEQLRSYGIKISYDGIRKTALDLLSYPN 127 Query: 513 FSIQNLFSICPDARKFSSL----------------VIERLQIESSYAAYTGRQMIEAKEI 556 L I P+ + + E ++IE+ Y Y RQ + K + Sbjct: 128 IDWNKLQEIWPELSSVTRWNGKMGHTKADNRAKNEICEAVEIEAKYKPYLIRQEADMKFL 187 Query: 557 KFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKN 616 + E IP +F+YS + LS+E+ EKL +KP + A +I+G+TPAA+ +L+Y++ Sbjct: 188 REEINTQIPINFNYSQVKGLSSEVIEKLQTIKPATIGIAKQIQGITPAAIVSILVYLRNR 247 Query: 617 TVKL 620 K+ Sbjct: 248 KTKV 251 >gi|258642605|gb|ACV85915.1| mitochondrial translation optimization protein [Aspergillus terreus] Length = 171 Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 80/170 (47%), Positives = 105/170 (61%), Gaps = 10/170 (5%) Query: 42 GSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRE 101 G SCNP+ GG+GKG ++RE+DA+DG+ GR+ D AGI FR+LN KGPAV GPR Q DR+ Sbjct: 1 GVCSCNPSFGGIGKGTMIREVDAMDGVAGRIIDKAGIMFRILNRSKGPAVWGPRAQIDRD 60 Query: 102 LYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIV----------MQDNSMIRCSTVV 151 LY+ MQ E+ E L +++G+VA K I I ++ +I VV Sbjct: 61 LYKKYMQEELTGTEGLSIVEGKVADIVVSKEGIEDIPGAQGKIVGVRLESGEIIPTGRVV 120 Query: 152 LTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTP 201 +TTGTFL G IHIG P+GRMG++ + L S + F GRLKTGTP Sbjct: 121 ITTGTFLGGEIHIGLKVFPSGRMGEAATFGLSKSLREAGFQLGRLKTGTP 170 >gi|258642585|gb|ACV85905.1| mitochondrial translation optimization protein [Aspergillus niger] Length = 171 Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 80/170 (47%), Positives = 104/170 (61%), Gaps = 10/170 (5%) Query: 42 GSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRE 101 G SCNP+ GG+GKG ++RE+DA+DG+ GR+ D AGI FR LN KGPAV GPR Q DR+ Sbjct: 1 GVCSCNPSFGGIGKGTMIREVDAMDGVAGRIIDKAGIMFRTLNQSKGPAVWGPRAQIDRD 60 Query: 102 LYRLAMQREILSQENLDVIQGEVAGFNTEKN----------IISSIVMQDNSMIRCSTVV 151 LY+ MQ E+ E L +++G+VA KN I + ++ +I VV Sbjct: 61 LYKKYMQEELQGTEGLSILEGKVADIVVSKNEVEHTPGAQGKIVGVRLESGEVIPTGKVV 120 Query: 152 LTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTP 201 +TTGTFL G IHIG P+GRMG++ + L S F GRLKTGTP Sbjct: 121 ITTGTFLGGEIHIGLEAYPSGRMGEAATFGLSKSLRDAGFTLGRLKTGTP 170 >gi|289805950|ref|ZP_06536579.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 157 Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 74/155 (47%), Positives = 102/155 (65%), Gaps = 1/155 (0%) Query: 175 GDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT 234 GD PS L + RLKTGTP R+D +TI + +Q D + FSFM + Sbjct: 1 GDPPSIPLSRRLRELPLRVSRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNAFQ 60 Query: 235 N-RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQI 293 + +Q+ C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI Sbjct: 61 HPQQVPCYITHTNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQI 120 Query: 294 FLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPG 328 FLEPEGL ++ +YPNGIST+LP ++Q Q +R++ G Sbjct: 121 FLEPEGLTSNEIYPNGISTSLPFDVQMQIVRSMQG 155 >gi|313896922|ref|ZP_07830469.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Selenomonas sp. oral taxon 137 str. F0430] gi|312974369|gb|EFR39837.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Selenomonas sp. oral taxon 137 str. F0430] Length = 237 Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 96/227 (42%), Positives = 126/227 (55%), Gaps = 4/227 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+IV+G GHAG EAA AA+LG T +T I M CNP++GG GK HLVREIDAL Sbjct: 11 YDIIVVGAGHAGVEAALAAARLGRRTLCVTLSLDNIAMMPCNPSVGGPGKSHLVREIDAL 70 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG AD A IQ R+LN KGPAV R QAD+ LY+ M+ + + NLDV Q V Sbjct: 71 GGEMGIAADRASIQRRLLNTGKGPAVHALRMQADKFLYQRIMKETLENTPNLDVRQLLVT 130 Query: 126 GFNTEKN----IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 +E+ ++ I + + V+L TGT+LRG I +G+ G G P+ Sbjct: 131 ELLSEETEDGRRVTGICCETGEQLAARAVILATGTYLRGRIILGETIYDGGPNGQRPAMQ 190 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSF 228 L +S R KTGTPAR+D +T+ + +T+ Q PF Sbjct: 191 LSDSLRALGLRLMRFKTGTPARVDARTVDFARTQVQEGRRARRPFPL 237 >gi|258642553|gb|ACV85889.1| mitochondrial translation optimization protein [Aspergillus carbonarius] Length = 171 Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 79/170 (46%), Positives = 104/170 (61%), Gaps = 10/170 (5%) Query: 42 GSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRE 101 G SCNP+ GG+GKG ++RE+DA+DG+ GR+ D AGI FR LN KGPAV GPR Q DR+ Sbjct: 1 GVCSCNPSFGGIGKGTMIREVDAMDGVAGRIIDKAGIMFRTLNRSKGPAVWGPRAQIDRD 60 Query: 102 LYRLAMQREILSQENLDVIQGEVAGFNTEK----------NIISSIVMQDNSMIRCSTVV 151 LY+ MQ E+L E L +++G+VA K I + ++ +I VV Sbjct: 61 LYKRYMQEELLGTEGLSILEGKVADIVVSKEGVEHTPGAQGKIVGVRLESGEVIPTGKVV 120 Query: 152 LTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTP 201 +TTGTFL G IHIG P+GR+G++ + L S F GRLKTGTP Sbjct: 121 ITTGTFLGGEIHIGLNAYPSGRLGEAATFGLSKSLRDAGFQLGRLKTGTP 170 >gi|258642617|gb|ACV85921.1| mitochondrial translation optimization protein [Aspergillus versicolor] Length = 171 Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 79/170 (46%), Positives = 104/170 (61%), Gaps = 10/170 (5%) Query: 42 GSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRE 101 G SCNP+ GG+GKG ++RE+DA+DG+ GR+ D AGI FR LN KGPAV GPR Q DR+ Sbjct: 1 GVCSCNPSFGGIGKGTMIREVDAMDGVAGRIIDKAGIMFRTLNQSKGPAVWGPRAQIDRD 60 Query: 102 LYRLAMQREILSQENLDVIQGEVAGFNTEKN----------IISSIVMQDNSMIRCSTVV 151 LY+ MQ E+ E L +++G+VA K+ I + ++ +I VV Sbjct: 61 LYKKYMQEELQGTEGLSILEGKVADIVVSKDEVEHTPGAQGKIVGVRLESGEVIPTGKVV 120 Query: 152 LTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTP 201 +TTGTFL G IHIG P+GRMG++ + L S F GRLKTGTP Sbjct: 121 ITTGTFLGGEIHIGLEAYPSGRMGEAATFGLSKSLRDAGFTLGRLKTGTP 170 >gi|258642551|gb|ACV85888.1| mitochondrial translation optimization protein [Aspergillus candidus] gi|258642587|gb|ACV85906.1| mitochondrial translation optimization protein [Aspergillus niger] gi|258642599|gb|ACV85912.1| mitochondrial translation optimization protein [Aspergillus phoenicis] gi|258642613|gb|ACV85919.1| mitochondrial translation optimization protein [Aspergillus usamii] Length = 171 Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 79/170 (46%), Positives = 104/170 (61%), Gaps = 10/170 (5%) Query: 42 GSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRE 101 G SCNP+ GG+GKG ++RE+DA+DG+ GR+ D AGI FR LN KGPAV GPR Q DR+ Sbjct: 1 GVCSCNPSFGGIGKGTMIREVDAMDGVAGRIIDKAGIMFRTLNRSKGPAVWGPRAQIDRD 60 Query: 102 LYRLAMQREILSQENLDVIQGEVAGFNTEKN----------IISSIVMQDNSMIRCSTVV 151 LY+ MQ E+ E L +++G+VA K+ I + ++ +I VV Sbjct: 61 LYKKYMQEELQGTEGLSIVEGKVADIVVSKDGVEHTPGAQGKIVGVRLESGEVIPTGKVV 120 Query: 152 LTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTP 201 +TTGTFL G IHIG P+GRMG++ + L S F GRLKTGTP Sbjct: 121 ITTGTFLGGEIHIGLEAYPSGRMGEAATFGLSKSLRDAGFTLGRLKTGTP 170 >gi|258642589|gb|ACV85907.1| mitochondrial translation optimization protein [Aspergillus niger] Length = 171 Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 79/170 (46%), Positives = 104/170 (61%), Gaps = 10/170 (5%) Query: 42 GSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRE 101 G SCNP+ GG+GKG ++RE+DA+DG+ GR+ D AGI FR LN KGPAV GPR Q DR+ Sbjct: 1 GVCSCNPSFGGIGKGAMIREVDAMDGVAGRIIDKAGIMFRTLNRSKGPAVWGPRAQIDRD 60 Query: 102 LYRLAMQREILSQENLDVIQGEVAGFNTEKN----------IISSIVMQDNSMIRCSTVV 151 LY+ MQ E+ E L +++G+VA K+ I + ++ +I VV Sbjct: 61 LYKKYMQEELQGTEGLSIVEGKVADIVVSKDGVEHTPGAQGKIVGVRLESGEVIPTGKVV 120 Query: 152 LTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTP 201 +TTGTFL G IHIG P+GRMG++ + L S F GRLKTGTP Sbjct: 121 ITTGTFLGGEIHIGLEAYPSGRMGEAATFGLSKSLRDAGFTLGRLKTGTP 170 >gi|258642611|gb|ACV85918.1| mitochondrial translation optimization protein [Aspergillus tubingensis] Length = 171 Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 79/170 (46%), Positives = 104/170 (61%), Gaps = 10/170 (5%) Query: 42 GSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRE 101 G SCNP+ GG+GKG ++RE+DA+DG+ GR+ D AGI FR LN KGPAV GPR Q DR+ Sbjct: 1 GVCSCNPSFGGIGKGTMIREVDAMDGVAGRIIDKAGIMFRTLNRSKGPAVWGPRAQIDRD 60 Query: 102 LYRLAMQREILSQENLDVIQGEVAGFNTEKN----------IISSIVMQDNSMIRCSTVV 151 LY+ MQ E+ E L +++G+VA K+ I + ++ +I VV Sbjct: 61 LYKKYMQEELRGTEGLSIVEGKVADIVVSKDGVEHTPGAQGKIVGVRLESGEVIPTGKVV 120 Query: 152 LTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTP 201 +TTGTFL G IHIG P+GRMG++ + L S F GRLKTGTP Sbjct: 121 ITTGTFLGGEIHIGLEAYPSGRMGEAATFGLSKSLRDAGFTLGRLKTGTP 170 >gi|312082549|ref|XP_003143490.1| glucose inhibited division protein A [Loa loa] gi|307761348|gb|EFO20582.1| glucose inhibited division protein A [Loa loa] Length = 160 Score = 153 bits (386), Expect = 9e-35, Method: Composition-based stats. Identities = 72/121 (59%), Positives = 89/121 (73%), Gaps = 1/121 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIGGGHAGCEAA A + A T L+T++ TIG MSCNP+ GG+GKGHL+RE+DA Sbjct: 17 TYDVIVIGGGHAGCEAATAATRCSAHTLLLTNRKDTIGEMSCNPSFGGVGKGHLIREVDA 76 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILS-QENLDVIQGE 123 LDGL GR+ D A I + LN +GPAV G R Q DR+LY+ MQ EIL+ E LDV++ Sbjct: 77 LDGLCGRICDKAAINYHALNSSQGPAVLGLRAQIDRKLYKQHMQHEILNCTEGLDVMERT 136 Query: 124 V 124 V Sbjct: 137 V 137 >gi|258642609|gb|ACV85917.1| mitochondrial translation optimization protein [Aspergillus terricola] Length = 171 Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 79/170 (46%), Positives = 104/170 (61%), Gaps = 10/170 (5%) Query: 42 GSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRE 101 G SCNP+ GG+GKG ++RE+DA+DG+ GR+ D AGI FR+LN KGPAV GPR Q DR+ Sbjct: 1 GVCSCNPSFGGIGKGTMIREVDAMDGVAGRIIDKAGIMFRILNRSKGPAVWGPRAQIDRD 60 Query: 102 LYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIV----------MQDNSMIRCSTVV 151 LY+ MQ E+ + L + +G+VA K I I ++ +I VV Sbjct: 61 LYKKYMQEELTGTQGLSIAEGKVADIVVSKEGIEDIPGAQGKIVGVRLESGEIIPTGRVV 120 Query: 152 LTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTP 201 +TTGTFL G IHIG P+GRMG++ + L S + F GRLKTGTP Sbjct: 121 ITTGTFLGGEIHIGLKVFPSGRMGEAATLGLSKSLREAGFQLGRLKTGTP 170 >gi|58257980|gb|AAW69385.1| glucose-inhibited division protein [Thermocrinis ruber DSM 12173] Length = 131 Score = 152 bits (385), Expect = 1e-34, Method: Composition-based stats. Identities = 69/126 (54%), Positives = 92/126 (73%), Gaps = 7/126 (5%) Query: 226 FSFMTDKITN-------RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSI 278 FSF T+ + + Q+ C IT T +TH II +N+ +A+Y G IK GPRYCPSI Sbjct: 5 FSFWTEPVGSYWFPPGKEQVLCWITYTTPKTHEIIRKNLHRTALYGGLIKGIGPRYCPSI 64 Query: 279 EDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPG 338 EDK+V+F +++ HQ+FLEPEGL+T VYPNG+ST+LPEE+Q + R IPGLEKV +IRP Sbjct: 65 EDKVVKFADKDRHQVFLEPEGLDTIEVYPNGLSTSLPEEVQWELYRPIPGLEKVELIRPA 124 Query: 339 YAIEYD 344 +AIEY+ Sbjct: 125 HAIEYE 130 >gi|258642579|gb|ACV85902.1| mitochondrial translation optimization protein [Aspergillus japonicus] Length = 171 Score = 152 bits (384), Expect = 2e-34, Method: Composition-based stats. Identities = 78/170 (45%), Positives = 103/170 (60%), Gaps = 10/170 (5%) Query: 42 GSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRE 101 G SCNP+ GG+GKG ++RE+DA+DG+ GR+ D AGI FR LN KGPAV GPR Q DR+ Sbjct: 1 GVCSCNPSFGGIGKGTMIREVDAMDGVAGRIIDKAGIMFRTLNRSKGPAVWGPRAQIDRD 60 Query: 102 LYRLAMQREILSQENLDVIQGEVAGFNTEKN----------IISSIVMQDNSMIRCSTVV 151 LY+ MQ E+ E L +++G+VA K+ I + ++ +I VV Sbjct: 61 LYKKYMQEELQGTEGLSIVEGKVADIVVSKDGVEHTPGAQGKIVGVRLESGEVIPTGKVV 120 Query: 152 LTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTP 201 +TTGTFL G IHIG P+GRMG++ + L F GRLKTGTP Sbjct: 121 ITTGTFLGGEIHIGLEAYPSGRMGEAATFGLSKPLRDAGFTLGRLKTGTP 170 >gi|258642547|gb|ACV85886.1| mitochondrial translation optimization protein [Aspergillus awamori] Length = 171 Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 78/170 (45%), Positives = 104/170 (61%), Gaps = 10/170 (5%) Query: 42 GSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRE 101 G SCNP+ GG+GKG ++RE+DA+DG+ GR+ D AGI FR LN KGPAV GPR Q DR+ Sbjct: 1 GVCSCNPSFGGIGKGTMIREVDAMDGVAGRIIDKAGIMFRTLNRSKGPAVWGPRAQIDRD 60 Query: 102 LYRLAMQREILSQENLDVIQGEVAGFNTEKN----------IISSIVMQDNSMIRCSTVV 151 LY+ MQ ++ E L +++G+VA K+ I + ++ +I VV Sbjct: 61 LYKKYMQEDLQGTEGLSIVEGKVADIVVSKDGVEHTPGAQGKIVGVRLESGEVIPTGKVV 120 Query: 152 LTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTP 201 +TTGTFL G IHIG P+GRMG++ + L S F GRLKTGTP Sbjct: 121 ITTGTFLGGEIHIGLEAYPSGRMGEAATFGLSKSLRDAGFTLGRLKTGTP 170 >gi|258642555|gb|ACV85890.1| mitochondrial translation optimization protein [Aspergillus carbonarius] Length = 171 Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 78/170 (45%), Positives = 103/170 (60%), Gaps = 10/170 (5%) Query: 42 GSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRE 101 G SCNP+ GG+GKG ++RE+DA+DG+ GR+ D AGI FR LN KGPAV GPR Q DR+ Sbjct: 1 GVCSCNPSFGGIGKGTMIREVDAMDGVAGRIIDKAGIMFRTLNRSKGPAVWGPRAQIDRD 60 Query: 102 LYRLAMQREILSQENLDVIQGEVAGFNTEK----------NIISSIVMQDNSMIRCSTVV 151 LY+ MQ E+L E L +++G+VA K I + ++ +I VV Sbjct: 61 LYKRYMQEELLGTEGLSILEGKVADIVVSKEGVEHTPGAQGKIVGVRLESGEVIPTGKVV 120 Query: 152 LTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTP 201 +TTGTFL G IH G P+GR+G++ + L S F GRLKTGTP Sbjct: 121 ITTGTFLGGEIHTGLNAYPSGRLGEAATFGLSKSLRDAGFQLGRLKTGTP 170 >gi|258642591|gb|ACV85908.1| mitochondrial translation optimization protein [Aspergillus niger] Length = 171 Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 78/170 (45%), Positives = 102/170 (60%), Gaps = 10/170 (5%) Query: 42 GSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRE 101 G SCNP+ GG+GKG ++RE+DA+DG+ GR+ D AGI FR LN KGPAV GPR Q DR+ Sbjct: 1 GVCSCNPSFGGIGKGTMIREVDAMDGVAGRIIDKAGIMFRTLNRSKGPAVWGPRAQIDRD 60 Query: 102 LYRLAMQREILSQENLDVIQGEVAGFNTEK----------NIISSIVMQDNSMIRCSTVV 151 LY+ Q E+ E L +++G+VA K I + ++ +I VV Sbjct: 61 LYKKYTQEELQGTEGLSIVEGKVADIVVSKEGVEHTPGAQGKIVGVRLESGEVIPTGKVV 120 Query: 152 LTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTP 201 +TTGTFL G IHIG P+GRMG++ + L S F GRLKTGTP Sbjct: 121 ITTGTFLGGEIHIGLEAYPSGRMGEAATFGLSKSLRDAGFTLGRLKTGTP 170 >gi|258642567|gb|ACV85896.1| mitochondrial translation optimization protein [Aspergillus foetidus] Length = 171 Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 78/170 (45%), Positives = 101/170 (59%), Gaps = 10/170 (5%) Query: 42 GSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRE 101 G SCNP+ GG+GKG ++RE+DA+DG+ GR+ D AGI FR LN KGPAV GPR Q DR+ Sbjct: 1 GVCSCNPSFGGIGKGTMIREVDAMDGVAGRIIDKAGIMFRTLNRSKGPAVWGPRAQIDRD 60 Query: 102 LYRLAMQREILSQENLDVIQGEVAGFNTEK----------NIISSIVMQDNSMIRCSTVV 151 LY+ MQ E+ E L +++G+VA K I + ++ +I VV Sbjct: 61 LYKKYMQEELQGTEGLSIVEGKVADIVVSKEGVEHTPGAQGKIVGVRLESGEVIPTGKVV 120 Query: 152 LTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTP 201 + TGTFL G IHIG P GRMG++ + L S F GRLKTGTP Sbjct: 121 IATGTFLGGEIHIGLEAYPLGRMGEAATFGLSKSLRDAGFTLGRLKTGTP 170 >gi|258642607|gb|ACV85916.1| mitochondrial translation optimization protein [Aspergillus terreus] Length = 171 Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 78/170 (45%), Positives = 103/170 (60%), Gaps = 10/170 (5%) Query: 42 GSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRE 101 G SCNP+ GG+GK ++RE+DA+DG+ GR+ D AGI FR+LN KGPAV GPR Q DR+ Sbjct: 1 GVCSCNPSFGGIGKWTMIREVDAMDGVAGRIIDKAGIMFRILNRSKGPAVWGPRAQIDRD 60 Query: 102 LYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIV----------MQDNSMIRCSTVV 151 LY+ MQ E+ + L + +G+VA K I I ++ +I VV Sbjct: 61 LYKKYMQEELTGTQGLSIAEGKVADIVVSKEGIEDIPGAQGKIVGVRLESGEIIPTGRVV 120 Query: 152 LTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTP 201 +TTGTFL G IHIG P+GRMG++ + L S + F GRLKTGTP Sbjct: 121 ITTGTFLGGEIHIGLKVFPSGRMGEAATFGLSKSLREAGFQLGRLKTGTP 170 >gi|58257976|gb|AAW69383.1| glucose-inhibited division protein [Hydrogenothermus marinus] Length = 160 Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 76/158 (48%), Positives = 101/158 (63%), Gaps = 8/158 (5%) Query: 195 RLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI--------TNRQIECGITRTN 246 ++KTGTPARLD TI W E+ DE FSF T+ + Q+ C IT TN Sbjct: 2 QIKTGTPARLDKNTINWSVLEEAPGDEIPPKFSFWTEPVGSYFFKKGQKDQVPCYITYTN 61 Query: 247 LETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVY 306 +TH II N+ +A+Y G I GPRYCPSIEDKIV+F + H ++LEPE + +Y Sbjct: 62 EKTHEIIKNNLHRTALYGGAITGVGPRYCPSIEDKIVKFEGKPRHTVWLEPETRDGISIY 121 Query: 307 PNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYD 344 PNG+ST+LPEEIQ + R+I GLE V +++P +AIEY+ Sbjct: 122 PNGLSTSLPEEIQWEMYRSIKGLENVVLLKPAHAIEYE 159 >gi|258642577|gb|ACV85901.1| mitochondrial translation optimization protein [Aspergillus glaucus] Length = 171 Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 78/170 (45%), Positives = 109/170 (64%), Gaps = 10/170 (5%) Query: 42 GSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRE 101 G SCNP+ GG+GKG ++RE+DA+DG+ GR+ D AGI FR+LN ++GPAV GPR Q DR+ Sbjct: 1 GVCSCNPSFGGIGKGIMIREVDAMDGVAGRIIDKAGIMFRMLNRRQGPAVWGPRAQIDRD 60 Query: 102 LYRLAMQREILSQENLDVIQGEVAGF--NTE--------KNIISSIVMQDNSMIRCSTVV 151 LY+ MQ+E++ E L +++G+VA +TE + I + ++ +I VV Sbjct: 61 LYKNYMQQELIGTEGLSIVEGKVADIVVSTEGVEDIPGAQGKIVGVKLESGEVIPTGRVV 120 Query: 152 LTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTP 201 +TTGTFL G IHIG +GRMG++ + L S F GRLKTGTP Sbjct: 121 ITTGTFLGGEIHIGLDVFSSGRMGEAATFGLSKSLHDAGFQLGRLKTGTP 170 >gi|289668144|ref|ZP_06489219.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 159 Score = 149 bits (377), Expect = 1e-33, Method: Composition-based stats. Identities = 81/152 (53%), Positives = 100/152 (65%), Gaps = 5/152 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAG EAA +A+ GA T L+TH ++G+MSCNPAIGG+GKGHLV+EIDAL Sbjct: 8 YDVIVIGGGHAGTEAALASARAGARTLLLTHNIESVGAMSCNPAIGGIGKGHLVKEIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M R AD AGIQ+R LN KGPAVR R QADR LYR A++ + +Q NL V Q V Sbjct: 68 GGAMARAADLAGIQWRTLNASKGPAVRATRCQADRNLYRNAIRCIVEAQPNLTVFQAAVD 127 Query: 126 GF-----NTEKNIISSIVMQDNSMIRCSTVVL 152 +E + + ++ Q +VVL Sbjct: 128 DLIIHNGTSEADSVRGVITQTGLRFEAPSVVL 159 >gi|258642615|gb|ACV85920.1| mitochondrial translation optimization protein [Aspergillus versicolor] Length = 172 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 77/171 (45%), Positives = 108/171 (63%), Gaps = 11/171 (6%) Query: 42 GSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRE 101 G SCNP+ GG+GKG ++RE+DA+DG+ GR+ D AGI F+VLN KG AV GPR Q DR+ Sbjct: 1 GVCSCNPSFGGIGKGTMIREVDAMDGVAGRIVDKAGIMFKVLNRSKGQAVWGPRAQIDRD 60 Query: 102 LYRLAMQREILSQENLDVIQGEVAGFNTEKNIIS-----------SIVMQDNSMIRCSTV 150 LY+ M+ E+LS E L +++G+VA K+ I+ + ++ +I + V Sbjct: 61 LYKNYMREELLSTEGLSILEGKVADIVVSKDDIAAGPAAPAGKIVEVRLESGEVIPTNRV 120 Query: 151 VLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTP 201 V+TTGTFL G I IG P+GR+G++ + L S + F GRLKTGTP Sbjct: 121 VITTGTFLGGEIQIGLKVFPSGRIGEAATFGLSKSLREAGFQLGRLKTGTP 171 >gi|258642545|gb|ACV85885.1| mitochondrial translation optimization protein [Aspergillus aculeatus] Length = 172 Score = 148 bits (374), Expect = 2e-33, Method: Composition-based stats. Identities = 77/171 (45%), Positives = 102/171 (59%), Gaps = 11/171 (6%) Query: 42 GSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRE 101 G SCNP+ GG+GKG ++RE+DA+DG+ GR D AG+ FR LN KGP V GPR Q DR+ Sbjct: 1 GVCSCNPSFGGIGKGTMIREVDAMDGVAGRTIDRAGVMFRTLNRSKGPTVWGPRAQIDRD 60 Query: 102 LYRLAMQREILSQENLDVIQGEVAGFNTEKN-----------IISSIVMQDNSMIRCSTV 150 LY+ M E+ S E L +++G+V K I + ++ +I S V Sbjct: 61 LYKKYMLEELSSTEGLSIVEGKVGDIVVSKEGVEDVPGMAQGKIVGVRLESGEVIATSRV 120 Query: 151 VLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTP 201 V+TTGTFL G IHIG P+GRMG++ + L S + F GRLKTGTP Sbjct: 121 VITTGTFLGGEIHIGLEAYPSGRMGEAATFGLSKSLREAGFQLGRLKTGTP 171 >gi|213022560|ref|ZP_03337007.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 136 Score = 147 bits (370), Expect = 7e-33, Method: Composition-based stats. Identities = 72/127 (56%), Positives = 90/127 (70%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNP IGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPTIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQF++LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFKILNASKGPAVRATRAQADRVLYRQAVRIALENQPNLMIFQQAVE 126 Query: 126 GFNTEKN 132 E + Sbjct: 127 DLIVEND 133 >gi|325917200|ref|ZP_08179427.1| NAD/FAD-utilizing enzyme apparently involved in cell division [Xanthomonas vesicatoria ATCC 35937] gi|325536590|gb|EGD08359.1| NAD/FAD-utilizing enzyme apparently involved in cell division [Xanthomonas vesicatoria ATCC 35937] Length = 228 Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 76/119 (63%), Positives = 89/119 (74%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA +A+ GA T L+TH T+G+MSCNPAIGG+GKGHLV+EIDAL Sbjct: 8 FDVIVIGGGHAGTEAALASARAGARTLLLTHNIETVGAMSCNPAIGGIGKGHLVKEIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 G M AD AGIQ+R LN KGPAVR R QADR LYR A++R + +Q NL V Q V Sbjct: 68 GGAMAHAADLAGIQWRTLNASKGPAVRATRCQADRNLYRNAIRRIVEAQPNLTVFQAAV 126 >gi|58699192|ref|ZP_00374004.1| glucose-inhibited division protein A [Wolbachia endosymbiont of Drosophila ananassae] gi|58534288|gb|EAL58475.1| glucose-inhibited division protein A [Wolbachia endosymbiont of Drosophila ananassae] Length = 231 Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 82/226 (36%), Positives = 121/226 (53%), Gaps = 16/226 (7%) Query: 411 MIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQE 470 MIDDL +KGV+EPYR+FTSRAEYR+++R DNAD RLT G + + R ++ Sbjct: 1 MIDDLVTKGVIEPYRLFTSRAEYRLAIRSDNADRRLTQKGYDISLVSHERYSVLQNKLES 60 Query: 471 YNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS 530 L L SL +T + L S I DG +TA + LSYP+ L I P+ + Sbjct: 61 IKQLEEKLGSLTITPEQLRSYGIKISYDGIRKTALDLLSYPNIDWNKLQEIWPELSSVTR 120 Query: 531 L----------------VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLP 574 + E ++IE+ Y Y RQ + K ++ E IP DF+YS + Sbjct: 121 WNDKMGHTKADNRAKNEICEAVEIEAKYKPYLIRQEADMKFLREEINTQIPIDFNYSQVK 180 Query: 575 ALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVKL 620 LS+E+ EKL +KP + A +I+G+TPAA+ +L+Y++ K+ Sbjct: 181 GLSSEVIEKLQTIKPATIGIAKQIQGITPAAIVSILVYLRNRKTKV 226 >gi|47219742|emb|CAG12664.1| unnamed protein product [Tetraodon nigroviridis] Length = 250 Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 89/226 (39%), Positives = 129/226 (57%), Gaps = 11/226 (4%) Query: 396 LDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGM-KLG 454 + + SRT+SYIGV+IDDL +GV EPYRMFTSRAE+R +LRPDNAD RL+ G ++G Sbjct: 1 MPAVTLSRTESYIGVLIDDLVCRGVTEPYRMFTSRAEFRTALRPDNADLRLSLKGFEEVG 60 Query: 455 CIGERRQKRFAKYIQEYNFLRSLLKSLVLTS----KNLSSTSISFKQDGKTR--TAYEFL 508 C+ R + + + L+ L +++ K L IS D K + L Sbjct: 61 CVSSERYQEALRVKNSLGEALAALQDLTMSTHKWRKTLPEVHIS---DAKAAVLSGLAVL 117 Query: 509 SYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDF 568 Y S Q L S PD + S +RL+IE+ Y + Q E + I+ EE +P+D Sbjct: 118 QYNQVSYQMLASCFPDVLRPFSEFSQRLKIEAVYKPHCDHQKKEIERIQKEENMSLPQDI 177 Query: 569 DYSSLP-ALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYI 613 DY SLP +LS E++E L ++P L A++++G+TPAA+ LL Y+ Sbjct: 178 DYFSLPVSLSQEVREILDRVRPSTLGAATRLQGITPAAIVHLLNYV 223 >gi|313759766|gb|ADR79195.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Chlamydophila psittaci] Length = 158 Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 73/159 (45%), Positives = 98/159 (61%), Gaps = 3/159 (1%) Query: 150 VVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTI 209 V+L++GTF+RG+IHIG L P GR+GD + L + + F RLKTGTP RL +I Sbjct: 1 VILSSGTFMRGLIHIGDLNFPGGRLGDPAATGLSLALKERGFPISRLKTGTPPRLLASSI 60 Query: 210 IWDKTEKQFADERLIPFSFMTDKITNR--QIECGITRTNLETHRIIMENIKHSAIYSGDI 267 + TE+Q D + F ++ Q+ C IT T +T II NI SA+Y G I Sbjct: 61 DFSVTEEQPGDPG-VGFVHKSEPFVPPLPQVSCYITHTTEKTKEIIAANIHRSALYGGRI 119 Query: 268 KSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVY 306 + GPRYCPSIEDKIV+F ++ H IF+EPEG++T VY Sbjct: 120 EGIGPRYCPSIEDKIVKFADKERHHIFIEPEGIHTQEVY 158 >gi|313759758|gb|ADR79191.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Chlamydophila psittaci] gi|313759760|gb|ADR79192.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Chlamydophila psittaci] gi|313759764|gb|ADR79194.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Chlamydophila psittaci] gi|313759768|gb|ADR79196.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Chlamydophila psittaci] Length = 158 Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 73/159 (45%), Positives = 98/159 (61%), Gaps = 3/159 (1%) Query: 150 VVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTI 209 V+L++GTF+RG+IHIG L P GR+GD + L + + F RLKTGTP RL +I Sbjct: 1 VILSSGTFMRGLIHIGDLNFPGGRLGDPAATGLSLALKERGFPISRLKTGTPPRLLASSI 60 Query: 210 IWDKTEKQFADERLIPFSFMTDKITNR--QIECGITRTNLETHRIIMENIKHSAIYSGDI 267 + TE+Q D + F ++ Q+ C IT T +T II NI SA+Y G I Sbjct: 61 DFSVTEEQPGDPG-VGFVHRSEPFVPPLPQVSCYITHTTEKTKEIIAANIHRSALYGGRI 119 Query: 268 KSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVY 306 + GPRYCPSIEDKIV+F ++ H IF+EPEG++T VY Sbjct: 120 EGIGPRYCPSIEDKIVKFADKERHHIFIEPEGIHTQEVY 158 >gi|313759756|gb|ADR79190.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Chlamydophila abortus] gi|313759762|gb|ADR79193.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Chlamydophila psittaci] gi|313759770|gb|ADR79197.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Chlamydophila abortus LLG] Length = 158 Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 73/159 (45%), Positives = 98/159 (61%), Gaps = 3/159 (1%) Query: 150 VVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTI 209 V+L++GTF+RG+IHIG L P GR+GD + L + + F RLKTGTP RL +I Sbjct: 1 VILSSGTFMRGLIHIGDLNFPGGRLGDPAATGLSLALKERGFPISRLKTGTPPRLLASSI 60 Query: 210 IWDKTEKQFADERLIPFSFMTDKITNR--QIECGITRTNLETHRIIMENIKHSAIYSGDI 267 + TE+Q D + F ++ Q+ C IT T +T II NI SA+Y G I Sbjct: 61 DFSVTEEQPGDPG-VGFVHRSEPFVPPLPQVSCYITHTTEKTKDIIAANIHRSALYGGRI 119 Query: 268 KSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVY 306 + GPRYCPSIEDKIV+F ++ H IF+EPEG++T VY Sbjct: 120 EGIGPRYCPSIEDKIVKFADKERHHIFIEPEGIHTQEVY 158 >gi|218463270|ref|ZP_03503361.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rhizobium etli Kim 5] Length = 174 Score = 139 bits (351), Expect = 1e-30, Method: Composition-based stats. Identities = 71/167 (42%), Positives = 103/167 (61%), Gaps = 1/167 (0%) Query: 452 KLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYP 511 +LGC+ R++RF Y E + R+ L SL +T ++ DG+ RTAY+ LSYP Sbjct: 1 RLGCVSRARERRFTVYQAEVDAGRAQLMSLKVTPNKARRAGLNINLDGQRRTAYDLLSYP 60 Query: 512 DFSIQNLFSICPDAR-KFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDY 570 D+ L + PDA V E L+IE+ Y+ Y RQ + + +E+R IP DFDY Sbjct: 61 DYDFAALRRVWPDALGAIRPTVAEALEIEAGYSVYLDRQAAAIADQQRDEERRIPDDFDY 120 Query: 571 SSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNT 617 S+L LSNELK KLS +PFN+ QA+ +EGMTPAA+ LLL+++++ + Sbjct: 121 SALSGLSNELKTKLSAARPFNVAQAAIVEGMTPAAIALLLVHLRRRS 167 >gi|298370288|ref|ZP_06981604.1| glucose-inhibited division protein A [Neisseria sp. oral taxon 014 str. F0314] gi|298281748|gb|EFI23237.1| glucose-inhibited division protein A [Neisseria sp. oral taxon 014 str. F0314] Length = 286 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 81/235 (34%), Positives = 131/235 (55%), Gaps = 5/235 (2%) Query: 386 GINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNR 445 G N+ + + + R +Y+GV++DDL +KGV EPYRMFTSRAEYR+ LR DNAD R Sbjct: 46 GANAVQYIRGQNPLLLRREQAYLGVLVDDLITKGVNEPYRMFTSRAEYRLQLREDNADMR 105 Query: 446 LTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTS---ISFKQDGKTR 502 LT G K+G + E + + F + + LK+ T + L+ + ++ + Sbjct: 106 LTEDGHKIGLVSEEQWRMFNEKREAIEREIQRLKTTWYTPQKLAEDEQIRVFGQKLSREA 165 Query: 503 TAYEFLSYPDFSIQNLFSI--CPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEE 560 ++ L P+ L ++ + S+ VIE+++I+ Y Y RQ E + E Sbjct: 166 NLHDLLRRPNLDYAALMTLEGARPSENLSAEVIEQVEIQVKYQGYIDRQNEEIDSRRDIE 225 Query: 561 KRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 +P D DYS + LS E+++KL+ KP + QAS+I G+TPAA+ LL++++K+ Sbjct: 226 TLKLPDDIDYSKVKGLSAEVQQKLNQHKPETVGQASRISGVTPAAVALLMVHLKR 280 >gi|296313292|ref|ZP_06863233.1| glucose-inhibited division protein A [Neisseria polysaccharea ATCC 43768] gi|296840214|gb|EFH24152.1| glucose-inhibited division protein A [Neisseria polysaccharea ATCC 43768] Length = 226 Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 77/220 (35%), Positives = 124/220 (56%), Gaps = 5/220 (2%) Query: 401 FSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR 460 R +Y+GV++DDL +KGV EPYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + Sbjct: 1 MRREQAYLGVLVDDLITKGVNEPYRMFTSRAEYRLQLREDNADMRLTEDGYKVGLVGEAQ 60 Query: 461 QKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQN 517 + F + + LK+ T + L+ + ++ + ++ L P+ Sbjct: 61 WRMFNEKREAVEREIQRLKTTWYTPQKLAENEQIRVFGQKLSREANLHDLLRRPNLDYAA 120 Query: 518 LFSI--CPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPA 575 L ++ + S+ V+E+++I+ Y Y RQ E + E +P DY + Sbjct: 121 LMTLEGAMPSENLSAEVVEQVEIQVKYQGYIDRQNEEIDSRRDIETLKLPDGIDYGKVKG 180 Query: 576 LSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 LS E+++KL+ KP + QAS+I G+TPAA+ LL++++K+ Sbjct: 181 LSAEVQQKLNQHKPETVGQASRISGVTPAAVALLMVHLKR 220 >gi|218189780|gb|EEC72207.1| hypothetical protein OsI_05295 [Oryza sativa Indica Group] Length = 305 Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 73/161 (45%), Positives = 95/161 (59%), Gaps = 7/161 (4%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + YDVIV+GGGHAGCEAA +A+LGA T L+T I CNPA+GG K LV E Sbjct: 64 LEERYDVIVVGGGHAGCEAALASARLGARTLLLTLNIDRIAWQPCNPAVGGPAKSQLVHE 123 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENL---D 118 +DAL G MG++AD +Q RVLN KGPAVR R Q D+ Y + M++ + S +NL + Sbjct: 124 VDALGGEMGKIADRCYLQKRVLNSSKGPAVRALRAQTDKREYAVEMKKVVESTQNLFIRE 183 Query: 119 VIQGEVA-GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFL 158 + EV G N + + D +VVLTTGTF+ Sbjct: 184 AMATEVMIGQNDNVEGVRTFFGMD---FYAPSVVLTTGTFM 221 >gi|94502335|ref|ZP_01308807.1| glucose-inhibited division protein A [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] gi|94451112|gb|EAT14065.1| glucose-inhibited division protein A [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] Length = 156 Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 66/156 (42%), Positives = 92/156 (58%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M + YDVIV+GGGH+G EAA A+ LG++T LIT IG MSCNPA+GG+ KG +++ Sbjct: 1 MFVKQYDVIVVGGGHSGSEAALAASNLGSNTLLITTNLYNIGQMSCNPAMGGIAKGQMIK 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G G + D + IQFR+LN KGPA+ PR Q DR + + + ++NL Sbjct: 61 EIDALGGYSGIITDKSMIQFRMLNKSKGPAMWSPRAQCDRLKFSKEWRLTLEKKKNLSFF 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGT 156 Q V + + + I+ +V+LT GT Sbjct: 121 QSTVVDLIIKNYKVIGVKTILGIYIKSKSVILTNGT 156 >gi|222874800|gb|EEF11931.1| predicted protein [Populus trichocarpa] Length = 95 Score = 128 bits (322), Expect = 3e-27, Method: Composition-based stats. Identities = 60/95 (63%), Positives = 72/95 (75%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA++G T L++H T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 1 FDVIVVGGGHAGTEAALAAARMGCRTLLLSHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 60 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADR 100 G M D GIQFR+LN KGPAVR R QADR Sbjct: 61 GGAMALATDIGGIQFRILNSSKGPAVRATRAQADR 95 >gi|219685811|ref|ZP_03540620.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Borrelia garinii Far04] gi|219672644|gb|EED29674.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Borrelia garinii Far04] Length = 128 Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 60/99 (60%), Positives = 74/99 (74%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +D IVIGGGHAG EAA ++L T +IT TIG +SCNPAIGGL KG++VREIDAL Sbjct: 3 FDAIVIGGGHAGIEAALALSRLNFKTLMITQNLDTIGKLSCNPAIGGLAKGNMVREIDAL 62 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYR 104 G MGR+ D + IQFRVLN +GPAV+ PR QAD+ +Y+ Sbjct: 63 GGEMGRIIDFSMIQFRVLNKSRGPAVQAPRAQADKLMYQ 101 >gi|159030092|emb|CAO90983.1| gidA [Microcystis aeruginosa PCC 7806] Length = 213 Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 73/181 (40%), Positives = 99/181 (54%), Gaps = 7/181 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+G GH+GCEAA A+LG T L+T I CNPA+GG K L E+DAL Sbjct: 13 FDVIVVGAGHSGCEAALACARLGCRTLLLTLNLDKIAWQPCNPAVGGPAKSQLTHEVDAL 72 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE-- 123 G +G++AD +Q RVLN +GPAV R Q D+ Y M+ + +Q NL + +G Sbjct: 73 GGEIGKIADRTYLQKRVLNASRGPAVWALRAQTDKREYAAVMKGIVETQANLVIREGMAT 132 Query: 124 --VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 + G N + + + + V+LTTGTFL G I IG + AGR G+ S Sbjct: 133 DLILGANEQ---VLGVETYFGTCFAAKAVILTTGTFLGGKIWIGGKSMAAGRAGEFASVG 189 Query: 182 L 182 L Sbjct: 190 L 190 >gi|289808878|ref|ZP_06539507.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 96 Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 55/96 (57%), Positives = 77/96 (80%) Query: 323 IRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQG 382 +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF AGQINGTTGYEEAAAQG Sbjct: 1 VRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIHGLFFAGQINGTTGYEEAAAQG 60 Query: 383 LVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 L+AG+N+AR S + +R+ +Y+GV++DDL ++ Sbjct: 61 LLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTR 96 >gi|238612927|ref|XP_002398335.1| hypothetical protein MPER_01087 [Moniliophthora perniciosa FA553] gi|215474664|gb|EEB99265.1| hypothetical protein MPER_01087 [Moniliophthora perniciosa FA553] Length = 132 Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 64/87 (73%), Positives = 72/87 (82%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDV VIGGGHAGCEAAA +A+ GA T L+T K TIG +SCNP+IGG+GKG LVREIDA Sbjct: 32 AYDVCVIGGGHAGCEAAAASARTGARTLLLTQKLDTIGELSCNPSIGGVGKGTLVREIDA 91 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAV 91 LDGLMGRV+D AGIQF VLN KG AV Sbjct: 92 LDGLMGRVSDKAGIQFYVLNRPKGAAV 118 >gi|269863877|ref|XP_002651378.1| tRNA (5-carboxymethylaminomethyl-2-thiouridylate) synthase subunit GidA, predicted [Enterocytozoon bieneusi H348] gi|220064641|gb|EED42679.1| tRNA (5-carboxymethylaminomethyl-2-thiouridylate) synthase subunit GidA, predicted [Enterocytozoon bieneusi H348] Length = 133 Score = 124 bits (312), Expect = 4e-26, Method: Composition-based stats. Identities = 74/124 (59%), Positives = 88/124 (70%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + S+DVIV+GGGHAG EAAA AA+LG T L+T TIG MSCNPAIGG+GKGHLV+E Sbjct: 1 MQNSFDVIVVGGGHAGTEAAAAAARLGVRTLLLTQNLDTIGQMSCNPAIGGIGKGHLVKE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DAL G+M D AGIQFR LN KGPAVR R QADR LY+ A++R + L + Q Sbjct: 61 VDALGGIMALAIDQAGIQFRTLNASKGPAVRATRAQADRSLYKRAVRRLLEDIPALQLFQ 120 Query: 122 GEVA 125 G V Sbjct: 121 GMVG 124 >gi|70922386|ref|XP_734367.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56507043|emb|CAH86072.1| hypothetical protein PC301834.00.0 [Plasmodium chabaudi chabaudi] Length = 212 Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 66/164 (40%), Positives = 98/164 (59%), Gaps = 6/164 (3%) Query: 190 DFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM---TDKITN-RQIECGITRT 245 +F+ R+KTGTP RL +I +D EK+ E+ PF F ++KI N + + C T T Sbjct: 43 NFEIKRMKTGTPPRLCKDSINFDILEKE-GTEKKHPFYFSFLNSNKINNNKTLPCYKTYT 101 Query: 246 NLETHRIIMENIKHSAIYSG-DIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 N+ TH ++++ + + D GPRYCPSI K+ +F E+ H I+LEPEG + + Sbjct: 102 NMNTHELVIKYLNELPDFDCYDKLGNGPRYCPSIAKKVTKFSEKKKHIIWLEPEGFDNIL 161 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINP 348 +YPNG+S+A P Q + I +I GLE I+ P Y +EY Y+NP Sbjct: 162 IYPNGLSSAYPLNRQQEIINSIKGLENAKILFPAYDVEYFYVNP 205 >gi|289810084|ref|ZP_06540713.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 211 Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 73/202 (36%), Positives = 111/202 (54%), Gaps = 4/202 (1%) Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYRMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R L Sbjct: 3 GTKEPYRMFTSRAEYRLMLREDNADLRLTEMGRELGLVDDERWARFNEKLENIERERQRL 62 Query: 479 KSLVLTSKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLFSICPDARKFS-SLVIE 534 KS +T S+ ++ + + + L P+ + L S+ A E Sbjct: 63 KSTWVTPSAESADEVNAHLTTPLSREASGEDLLRRPEMTYAQLTSLAAFAPALEDEQAAE 122 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ Q Sbjct: 123 QVEIQVKYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQ 182 Query: 595 ASKIEGMTPAALNLLLIYIKKN 616 AS+I G+TPAA+++LL+++KK Sbjct: 183 ASRISGVTPAAISILLVWLKKQ 204 >gi|254672743|emb|CBA06740.1| glucose inhibited division protein A [Neisseria meningitidis alpha275] Length = 118 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 59/90 (65%), Positives = 70/90 (77%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 19 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 78 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRG 93 AL G M D +GIQFR LN KG AVRG Sbjct: 79 ALGGAMALATDKSGIQFRRLNASKGAAVRG 108 >gi|305431782|ref|ZP_07400949.1| glucose inhibited division protein A [Campylobacter coli JV20] gi|304444866|gb|EFM37512.1| glucose inhibited division protein A [Campylobacter coli JV20] Length = 240 Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 84/254 (33%), Positives = 133/254 (52%), Gaps = 43/254 (16%) Query: 384 VAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNAD 443 +AG+N+ + + R ++YIGV+IDDL KG EPYRMFTSRAE+R+ LR +NA Sbjct: 1 MAGVNAVLALDNKEPFILRRDEAYIGVLIDDLVIKGTKEPYRMFTSRAEFRLLLREENAI 60 Query: 444 NRLTPIGMKLGCIGERR-------------------QKRFAKYIQEYNFLRSL----LKS 480 RL G +LG + + +K F + FL S+ + S Sbjct: 61 VRLGKYGKELGLLEDESYQFIENIRLNTQKGLELLLEKEFTPNTENNAFLASIGEEKITS 120 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 +V K ++ +S ++ K T +E + ++S++ I +A+ + + +++ Q+E Sbjct: 121 IVNLQKIVARSSFDIEKLKKLNTIFE--NMDEYSLR---EILNEAKYYHYIAMQKSQVEK 175 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 + +I+ K IP DFD++S+ LSNE+ EKL KP L AS+I G Sbjct: 176 M------KNLIDMK---------IPSDFDFTSVSGLSNEVVEKLQKHKPLTLFAASEISG 220 Query: 601 MTPAALNLLLIYIK 614 +TPAAL++L IYIK Sbjct: 221 ITPAALDILQIYIK 234 >gi|58699038|ref|ZP_00373881.1| glucose-inhibited division protein A [Wolbachia endosymbiont of Drosophila ananassae] gi|58534448|gb|EAL58604.1| glucose-inhibited division protein A [Wolbachia endosymbiont of Drosophila ananassae] Length = 234 Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 75/210 (35%), Positives = 105/210 (50%), Gaps = 16/210 (7%) Query: 410 VMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQ 469 VMIDDL +KGV+EPYR+FTSRAEYR+++R DNAD RLT G + + R ++ Sbjct: 23 VMIDDLVTKGVIEPYRLFTSRAEYRLAIRSDNADRRLTQKGYDISLVSHERYSVLQNKLE 82 Query: 470 EYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFS 529 L L SL +T + L S I DG +TA + LSYP+ L I P+ + Sbjct: 83 SIKQLEEKLGSLTITPEQLRSYGIKISYDGIRKTALDLLSYPNIDWNKLQEIWPELSSVT 142 Query: 530 SL----------------VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSL 573 + E ++IE+ Y Y RQ + K ++ E IP DF+YS + Sbjct: 143 RWNDKMGHTKADNRAKNEICEAVEIEAKYKPYLIRQEADMKFLREEINTQIPIDFNYSQV 202 Query: 574 PALSNELKEKLSILKPFNLLQASKIEGMTP 603 LS+E+ EKL + L SK + P Sbjct: 203 KGLSSEVIEKLQTINQRRLALQSKYKASLP 232 >gi|218682746|ref|ZP_03530347.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rhizobium etli CIAT 894] Length = 162 Score = 120 bits (300), Expect = 8e-25, Method: Composition-based stats. Identities = 62/155 (40%), Positives = 97/155 (62%), Gaps = 5/155 (3%) Query: 464 FAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICP 523 F Y E + R+LL SL +T ++ DG+ RTAY+ LSYP++ L + P Sbjct: 1 FTAYQAEIDAGRALLTSLAVTPNEARRAGLNINLDGQRRTAYDLLSYPNYDFAALREVWP 60 Query: 524 DARKFSSL---VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNEL 580 + F+++ V E L+IE+ Y+ Y RQ + + +E+R IP DF+Y +L LSNEL Sbjct: 61 ET--FAAIAPKVAEALEIEAGYSVYLERQASAIADQQRDEERQIPADFNYDALSGLSNEL 118 Query: 581 KEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 K KL+ ++PFN+ QA+ +EGMTPAA+ LLL+++++ Sbjct: 119 KTKLNAVRPFNIAQAAIVEGMTPAAIALLLVHLRR 153 >gi|229007797|ref|ZP_04165383.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus mycoides Rock1-4] gi|228753474|gb|EEM02926.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus mycoides Rock1-4] Length = 212 Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 66/207 (31%), Positives = 120/207 (57%), Gaps = 7/207 (3%) Query: 417 SKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRS 476 +KG EPYR+ TSRAEYR+ LR DNAD RLT IG ++G I E R RF ++ + Sbjct: 2 TKGTNEPYRLLTSRAEYRLLLRHDNADLRLTEIGQEIGLIPEERYGRFTVKKEQIEQEKL 61 Query: 477 LLKSLVLTSKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL 531 L+S+++ + + S S +DG A + L P+ + +++ + P + Sbjct: 62 RLESIIIKPRPEVQELIRSVGGSELKDGIR--ASDLLRRPEMTYEHIRILAPSEVEIHDE 119 Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 + E+++I+ Y Y + + + + +K E + IP D DY ++ +++E ++KL ++P + Sbjct: 120 IAEQVEIQIKYEGYIEKSLQQVERMKKMESKKIPVDIDYDAISGIASEARQKLKDVRPLS 179 Query: 592 LLQASKIEGMTPAALNLLLIYIKKNTV 618 + QAS+I G+ PA +++LL+YI++ + Sbjct: 180 MGQASRISGVNPADISILLVYIEQGKI 206 >gi|148694451|gb|EDL26398.1| mitochondrial translation optimization 1 homolog (S. cerevisiae), isoform CRA_a [Mus musculus] Length = 150 Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats. Identities = 65/103 (63%), Positives = 82/103 (79%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DV+VIGGGHAG EAAA AA+ G+ T L+TH+ TIG MSCNP+ GG+GKGHL+RE+DAL Sbjct: 36 FDVVVIGGGHAGTEAAAAAARCGSRTLLLTHRVDTIGQMSCNPSFGGIGKGHLMREVDAL 95 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQ 108 DGL R+ D +GI ++VLN +KGPAV G R Q DR+LY+ MQ Sbjct: 96 DGLCSRICDQSGIHYKVLNRRKGPAVWGLRAQIDRKLYKQNMQ 138 >gi|149572464|ref|XP_001516759.1| PREDICTED: similar to MTO1 [Ornithorhynchus anatinus] Length = 200 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 69/119 (57%), Positives = 88/119 (73%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+V+GGGHAG EAAA AA+ G T L+ H +G MSCNP+ GG+GKGHL+RE+DAL Sbjct: 41 YDVLVVGGGHAGTEAAAAAARTGCRTLLLNHHVHPLGQMSCNPSFGGIGKGHLMREVDAL 100 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 DGL GR+ D +G+ ++VLN +KGPAV G R Q DR+LY+ MQREIL+ L V + V Sbjct: 101 DGLCGRICDLSGVHYKVLNRRKGPAVWGLRAQIDRKLYKQNMQREILNTPLLTVQEASV 159 >gi|169836600|ref|ZP_02869788.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [candidate division TM7 single-cell isolate TM7a] Length = 148 Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 61/144 (42%), Positives = 84/144 (58%), Gaps = 12/144 (8%) Query: 44 MSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELY 103 MSCNP++GG K HL +E+DAL G +GR D + +Q R+LN KKGPAVR R QADR++Y Sbjct: 1 MSCNPSVGGPAKSHLAKEVDALGGEIGRNMDKSFVQMRILNTKKGPAVRSLRAQADRKIY 60 Query: 104 RLAMQREILSQENLDVIQGEVA------------GFNTEKNIISSIVMQDNSMIRCSTVV 151 M++ I QENLD++Q V G + ++ I + VV Sbjct: 61 AREMKKTIEHQENLDIVQDIVTELIVDEVEIDEKGSKRIEKVVRGIKTKTGMEFFAKAVV 120 Query: 152 LTTGTFLRGVIHIGKLKIPAGRMG 175 L TGTFLRG+++IG ++ GR G Sbjct: 121 LATGTFLRGLLYIGDKRVKGGRTG 144 >gi|5731953|emb|CAB52589.1| glucose inhibited division protein A, putative [Sweet potato little leaf phytoplasma] Length = 183 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 70/190 (36%), Positives = 104/190 (54%), Gaps = 10/190 (5%) Query: 408 IGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKY 467 IGV+IDDL +KG EPYR+ TSRAE+R+ LR DNAD RL P G K G I + Sbjct: 1 IGVLIDDLINKGTYEPYRLLTSRAEFRLLLRHDNADLRLMPYGFKFGLIDHKTFDWLKNK 60 Query: 468 IQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFS---IQNLFSICPD 524 + N+L+ L + L + +L +I+ D + + Y+ L D + N F Sbjct: 61 QMQINYLKEKLHNFYLDADSLYKFNIN--SDSRRISLYQLLKRSDLKEDILNNFF----- 113 Query: 525 ARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKL 584 A ++S V+E++ I+ Y Y + E K+ E+++IP + DY + LS E KEKL Sbjct: 114 ASQYSVDVLEQVGIQIKYEDYILKSEKEVKKNSHLEEKVIPNNIDYKIIKNLSQEAKEKL 173 Query: 585 SILKPFNLLQ 594 + +KPFN+ Q Sbjct: 174 TKIKPFNIAQ 183 >gi|40218204|gb|AAR83008.1| GidA [Escherichia coli] Length = 86 Score = 113 bits (283), Expect = 8e-23, Method: Composition-based stats. Identities = 53/79 (67%), Positives = 64/79 (81%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGLMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLN 84 GLM + D AGIQFR+LN Sbjct: 67 GGLMAKAIDQAGIQFRILN 85 >gi|94502427|ref|ZP_01308869.1| glucose-inhibited division protein A [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] gi|94451015|gb|EAT13998.1| glucose-inhibited division protein A [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] Length = 212 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 76/220 (34%), Positives = 125/220 (56%), Gaps = 15/220 (6%) Query: 401 FSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR 460 R ++YIGV+IDDL KG EPYRMFTSRAEYRI LR DNAD RLT +G+ LG + R Sbjct: 2 LKRNEAYIGVLIDDLIYKGTEEPYRMFTSRAEYRILLRQDNADERLTHMGINLGLVSYDR 61 Query: 461 QKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNL-- 518 I++ K L K + ++ K++ K + LS P+ SI ++ Sbjct: 62 -------IKKLKNKNKNKKQCFLFFKINKANNLILKENIKI---CDLLSRPEISIYDIIK 111 Query: 519 FSICPDARKFSSL---VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPA 575 S+ + K +++ ++E++ + Y Y ++ K++ E IP DFDY+ + + Sbjct: 112 LSLIKNFIKKNNIDKKILEQISLYIKYKGYLLKEEENVKKMYRLETIRIPNDFDYNQVKS 171 Query: 576 LSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 +S E +EKL KP ++ +AS+I G++P+ + +L++++ K Sbjct: 172 ISIEAREKLLNYKPNSIGEASRISGVSPSDIRILILFLIK 211 >gi|255023682|ref|ZP_05295668.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes FSL J1-208] Length = 117 Score = 110 bits (276), Expect = 5e-22, Method: Composition-based stats. Identities = 53/107 (49%), Positives = 69/107 (64%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+G GHAG EA + ++GA T ++T + M CNP++GG KG +VREIDA Sbjct: 8 TFDVIVVGAGHAGVEAGLASGRMGAKTLMLTINLDMVAFMPCNPSVGGPAKGVVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREI 111 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ M+ I Sbjct: 68 LGGEMGRNTDKTYIQMRMLNTGKGPAVRALRAQADKWDYQHEMKHTI 114 >gi|76782136|gb|ABA54842.1| GidA [Nostoc commune DRH1] Length = 154 Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 58/136 (42%), Positives = 79/136 (58%), Gaps = 11/136 (8%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+G GH+GCEAA +A+LG T L+T I CNPA+GG K L E+DA Sbjct: 12 AFDVIVVGAGHSGCEAALASARLGCRTLLLTLNLDRIAWQPCNPAVGGPAKSQLTHEVDA 71 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ--- 121 L G +G+VAD +Q R+LN +GPAV R Q D+ Y M+ + +QENL + + Sbjct: 72 LGGEIGKVADRTYLQKRILNSSRGPAVWALRAQTDKREYAAVMKNIVENQENLTIRESIA 131 Query: 122 --------GEVAGFNT 129 GEV+G T Sbjct: 132 TDLVLGAYGEVSGVET 147 >gi|213608024|ref|ZP_03368850.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 201 Score = 108 bits (270), Expect = 3e-21, Method: Composition-based stats. Identities = 67/193 (34%), Positives = 105/193 (54%), Gaps = 4/193 (2%) Query: 427 FTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSK 486 FTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R LKS +T Sbjct: 1 FTSRAEYRLMLREDNADLRLTEMGRELGLVDDERWARFNEKLENIERERQRLKSTWVTPS 60 Query: 487 NLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLFSICPDARKFS-SLVIERLQIESSY 542 S+ ++ + + + L P+ + L S+ A E+++I+ Y Sbjct: 61 AESADEVNAHLTTPLSREASGEDLLRRPEMTYAQLTSLAAFAPALEDEQAAEQVEIQVKY 120 Query: 543 AAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMT 602 Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G+T Sbjct: 121 EGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISGVT 180 Query: 603 PAALNLLLIYIKK 615 PAA+++LL+++KK Sbjct: 181 PAAISILLVWLKK 193 >gi|123242162|emb|CAM20958.1| mitochondrial translation optimization 1 homolog (S. cerevisiae) [Homo sapiens] Length = 98 Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats. Identities = 47/81 (58%), Positives = 62/81 (76%) Query: 44 MSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELY 103 MSCNP+ GG+GKGHL+RE+DALDGL R+ D +G+ ++VLN +KGPAV G R Q DR+LY Sbjct: 1 MSCNPSFGGIGKGHLMREVDALDGLCSRICDQSGVHYKVLNRRKGPAVWGLRAQIDRKLY 60 Query: 104 RLAMQREILSQENLDVIQGEV 124 + MQ+EIL+ L V +G V Sbjct: 61 KQNMQKEILNTPLLTVQEGAV 81 >gi|407664|gb|AAD12347.1| uncertain [Mycoplasma genitalium] Length = 94 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 50/90 (55%), Positives = 63/90 (70%) Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 D +Y G+ST+ EIQ + I+ +PG + I + GYAIEYD +L PTLETK I Sbjct: 2 DTIYLAGLSTSFTPEIQKEIIQLLPGFQNAEIKKFGYAIEYDAFLSNQLKPTLETKLIEN 61 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARK 392 L+ AGQINGT+GYEEAA QGL+AGIN+A K Sbjct: 62 LYFAGQINGTSGYEEAAGQGLMAGINAALK 91 >gi|119569153|gb|EAW48768.1| mitochondrial translation optimization 1 homolog (S. cerevisiae), isoform CRA_i [Homo sapiens] Length = 228 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 73/199 (36%), Positives = 115/199 (57%), Gaps = 11/199 (5%) Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMK-LGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 MFTSR E+R+SLRPDNAD+RLT G K GC+ ++R +R S+LKS+ Sbjct: 1 MFTSRVEFRLSLRPDNADSRLTLRGYKDAGCVSQQRYERACWMKSSLEEGISVLKSIEFL 60 Query: 485 S----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA-RKFSSL--VIERLQ 537 S K + SIS + R A + L Y + + +L P+ +K++ + ERL+ Sbjct: 61 SSKWKKLIPEASISTSRSLPVR-ALDVLKYEEVDMDSLAKAVPEPLKKYTKCRELAERLK 119 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLP--ALSNELKEKLSILKPFNLLQA 595 IE++Y + Q+ E K ++ +E +PKD DY ++ +LS+E++EKL +P + A Sbjct: 120 IEATYESVLFHQLQEIKGVQQDEALQLPKDLDYLTIRDVSLSHEVREKLHFSRPQTIGAA 179 Query: 596 SKIEGMTPAALNLLLIYIK 614 S+I G+TPAA+ LL ++K Sbjct: 180 SRIPGVTPAAIINLLRFVK 198 >gi|20799574|gb|AAM28552.1|AF494528_1 glucose inhibited division protein A 3 [Tomato big bud phytoplasma] Length = 183 Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 67/189 (35%), Positives = 100/189 (52%), Gaps = 10/189 (5%) Query: 407 YIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAK 466 Y GV+IDDL +KG PYR+ TSRAE+R+ LR DNAD RL P G K G I + Sbjct: 1 YXGVLIDDLINKGTYXPYRLLTSRAEFRLLLRHDNADLRLMPYGFKFGLIDHKTFDWLKN 60 Query: 467 YIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFS---IQNLFSICP 523 + N+L+ L + L + +L +I+ D + + Y+ L D + N F Sbjct: 61 KQMQINYLKEKLHNFYLDADSLYKFNIN--SDSRRISLYQLLKRSDLKEDILNNFF---- 114 Query: 524 DARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEK 583 A ++S V+E++ I+ Y Y + E K+ E+++IP + DY + LS E KEK Sbjct: 115 -ASQYSVDVLEQVGIQIKYEDYILKSEKEVKKNSHLEEKVIPNNIDYKIIKNLSQEAKEK 173 Query: 584 LSILKPFNL 592 +KPFN+ Sbjct: 174 XXKIKPFNI 182 >gi|20799554|gb|AAM28544.1|AF494515_1 glucose inhibited division protein A [Tomato big bud phytoplasma] Length = 174 Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 63/181 (34%), Positives = 95/181 (52%), Gaps = 10/181 (5%) Query: 417 SKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRS 476 +KG EPYR+ TSRAE+R+ LR DNAD RL P G K G I + + N+L+ Sbjct: 1 NKGTYEPYRLLTSRAEFRLLLRHDNADLRLMPYGFKFGLIDHKTFDWLKNKQMQINYLKE 60 Query: 477 LLKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFS---IQNLFSICPDARKFSSLVI 533 L + L + +L +I+ D + + Y+ L D + N F A ++S V+ Sbjct: 61 KLHNFYLDADSLYKFNIN--SDSRRISLYQLLKRSDLKEDILNNFF-----ASQYSVDVL 113 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 E++ I+ Y Y + E K+ E+++IP + DY + LS E KEKL +KPFN+ Sbjct: 114 EQVGIQIKYEDYILKSEKEVKKNSHLEEKVIPNNIDYKIIKNLSQEAKEKLXKIKPFNIA 173 Query: 594 Q 594 Q Sbjct: 174 Q 174 >gi|301090002|ref|XP_002895249.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG, putative [Phytophthora infestans T30-4] gi|262101005|gb|EEY59057.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG, putative [Phytophthora infestans T30-4] Length = 151 Score = 97.8 bits (242), Expect = 5e-18, Method: Composition-based stats. Identities = 54/115 (46%), Positives = 72/115 (62%), Gaps = 10/115 (8%) Query: 69 MGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFN 128 MG+VADAAGIQFR+LN KGPAVRGPR Q DR+LY+ +Q+ + NL +++ V Sbjct: 1 MGQVADAAGIQFRMLNSAKGPAVRGPRAQMDRDLYQQGIQKALQELPNLWLVEDGVDDLM 60 Query: 129 TEK---------NIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIG-KLKIPAGR 173 EK + +V I+ S VV+TTGTFLRG+I+ G ++IPAGR Sbjct: 61 LEKINQSNDDVEERVKGVVTSSGREIQASQVVITTGTFLRGMIYQGPDIRIPAGR 115 >gi|213422763|ref|ZP_03355809.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 75 Score = 95.5 bits (236), Expect = 2e-17, Method: Composition-based stats. Identities = 44/69 (63%), Positives = 54/69 (78%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNP IGG+GKGHLV+E+DAL Sbjct: 6 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPTIGGIGKGHLVKEVDAL 65 Query: 66 DGLMGRVAD 74 GLM + D Sbjct: 66 GGLMAKAID 74 >gi|206900653|ref|YP_002251234.1| gid protein [Dictyoglomus thermophilum H-6-12] gi|254789171|sp|B5YFC6|TRMFO_DICT6 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|206739756|gb|ACI18814.1| gid protein [Dictyoglomus thermophilum H-6-12] Length = 439 Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 117/434 (26%), Positives = 168/434 (38%), Gaps = 73/434 (16%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGL----G 54 V +IGGG AG EAA AK + HKT + + C+ + Sbjct: 4 VKIIGGGLAGSEAAWQLAKRKIPVEIYEMRPVVTTPVHKTEYLAELVCSNSFKSTELTNA 63 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L E+ LD L+ RVA+ + PA G DREL+ +Q +L Sbjct: 64 SGLLKEEMKKLDSLLLRVAEETRV----------PA--GVALAVDRELFAKRVQEILLES 111 Query: 115 ENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRM 174 + VI+ EV E +I +T LT+ F +I I L + Sbjct: 112 PYVTVIREEVKKIPEEGIVI------------VATGPLTSSDFAEHLIEI--LDTDSLYF 157 Query: 175 GDSPSNSLFNSFMKFD--FDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK 232 D+ S ++ + ++ F R G A L+ MT + Sbjct: 158 YDAVSPIIYADSINYEKVFSASRYGKGEEAYLNCP---------------------MTKE 196 Query: 233 ITNRQIECGITRTNLETHRIIMEN-------IKHSAIYSGDIKSYGPRYCPSIEDKIVRF 285 R +E + +E+H E I+ A D YGP + D + Sbjct: 197 EYERFVEELVNAETVESHYPGEEKFFEGCLPIEVLARRGIDTLRYGPMKPVGLIDP--KT 254 Query: 286 GERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDY 345 G+ + L PE + + G T L + Q + R IPGLE R G Y Sbjct: 255 GKEPYAVVQLRPENIQKTLYSMVGFQTRLKFQEQRRIFRMIPGLENAEFARYGVMHRNTY 314 Query: 346 I-NPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 PK L PTL+ K +F AGQ+ G GY E+AA G+VAGIN+AR I T Sbjct: 315 FYAPKFLKPTLQFIKNERVFFAGQLIGVEGYMESAAMGIVAGINAARLYKGKPLIILPPT 374 Query: 405 DSYIGVMIDDLTSK 418 + IG +I +T+K Sbjct: 375 -TMIGALISYVTTK 387 >gi|67984129|gb|AAY84707.1| GidA [Vibrio mimicus] Length = 67 Score = 88.2 bits (217), Expect = 4e-15, Method: Composition-based stats. Identities = 40/65 (61%), Positives = 52/65 (80%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA AA+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHETFDVIVVGGGHAGTEAALAAARTGQRTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDAL 65 E+DA+ Sbjct: 62 EVDAM 66 >gi|229087970|ref|ZP_04220077.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus Rock3-44] gi|228695339|gb|EEL48217.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus Rock3-44] Length = 191 Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 50/187 (26%), Positives = 103/187 (55%), Gaps = 7/187 (3%) Query: 437 LRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKN-----LSST 491 +R DNAD RLT IG ++G I + R +RF + ++ L+ L++ + + S Sbjct: 1 MRHDNADLRLTEIGHEIGLIPDERYERFTMKKETVEQEKARLEGLIIKPRPEVQELIRSI 60 Query: 492 SISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYTGRQMI 551 S +DG A + L + + +++ + P + + + E+++I+ Y Y + + Sbjct: 61 GGSELKDGIR--ASDLLRRTEVTYEHIRLLVPSEVEINDEIAEQVEIQVKYEGYIEKSLQ 118 Query: 552 EAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLI 611 + +K E + IP D DY ++ +++E ++KL ++P ++ QAS+I G+ PA +++LL+ Sbjct: 119 QVDRMKKMENKKIPVDIDYDAISGIASEARQKLKDVRPLSMGQASRISGVNPADISILLV 178 Query: 612 YIKKNTV 618 YI++ + Sbjct: 179 YIEQGKI 185 >gi|332855186|ref|ZP_08435737.1| hypothetical protein HMPREF0021_03326 [Acinetobacter baumannii 6013150] gi|332727563|gb|EGJ58985.1| hypothetical protein HMPREF0021_03326 [Acinetobacter baumannii 6013150] Length = 74 Score = 87.0 bits (214), Expect = 8e-15, Method: Composition-based stats. Identities = 42/60 (70%), Positives = 48/60 (80%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GK HLVREID Sbjct: 5 KVYDVIVIGGGHAGTEAALAAARMGRQTLLLTHNIETLGQMSCNPAIGGIGKSHLVREID 64 >gi|150020140|ref|YP_001305494.1| tRNA (uracil-5-)-methyltransferase Gid [Thermosipho melanesiensis BI429] gi|205830345|sp|A6LJK8|TRMFO_THEM4 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|149792661|gb|ABR30109.1| gid protein [Thermosipho melanesiensis BI429] Length = 429 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 117/450 (26%), Positives = 175/450 (38%), Gaps = 94/450 (20%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGL-------------G 54 V +IG G AG E A G + K ++ NP G L Sbjct: 3 VNIIGAGLAGVEVAWKLLNTGVKVRIFEQKPKKFSTVHKNPNFGELVCSNSLKSESLNNA 62 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 +G L E++ LD L+ + A + PA G DR+ + + ILS Sbjct: 63 EGILKAEMNILDSLVLKCAYRCRV----------PA--GKALAVDRDKFSQCITEHILSF 110 Query: 115 ENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRM 174 +N++VI+ E I SI ++++ + +T T G F + Sbjct: 111 DNVEVIREE----------IKSIDLKEDEIWVVATGPTTDGEFANWL------------- 147 Query: 175 GDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT 234 ++L F+ F FD + G +I ++K FAD K T Sbjct: 148 -----SNLTGGFLNF-FD------AVAPIISGDSIDFNKC--FFADR--------YGKGT 185 Query: 235 NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF 294 + I C +T+ E + N + + D K R C IE+ I + GE++ Sbjct: 186 SDYINCPMTKEEYERFYKELINAEKIEMEDFDRKLLFER-CQPIEE-IAKSGEKSLLFGP 243 Query: 295 LEPEGL--------------------NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNI 334 L P GL N ++ G T L Q + IR IPGLE I Sbjct: 244 LRPVGLIDPRTGKMPYAIIQLRKEDENGNMYNLVGFQTRLKWPQQKRIIRLIPGLENAEI 303 Query: 335 IRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKS 393 +R G YI+ PK L L KK LF AGQI G GY E+AA G+ GIN R Sbjct: 304 LRYGVMHRNTYIDSPKVLDEFLRHKKFQNLFFAGQITGVEGYVESAATGIFVGINILRFL 363 Query: 394 NKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 K + + T + +G +++ +T+ L+P Sbjct: 364 EKKELVALP-TKTMLGALLNYITTSKQLKP 392 >gi|212639575|ref|YP_002316095.1| glucose-inhibited division protein [Anoxybacillus flavithermus WK1] gi|259547945|sp|B7GGC8|TRMFO_ANOFW RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|212561055|gb|ACJ34110.1| NAD(FAD)-utilizing enzyme possibly involved in translation (glucose-inhibited division protein) [Anoxybacillus flavithermus WK1] Length = 432 Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 108/425 (25%), Positives = 170/425 (40%), Gaps = 56/425 (13%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGL---- 53 +V VIG G AG EAA AK G L H T + C+ ++ Sbjct: 2 EVTVIGAGLAGSEAAWQLAKRGIRVKLYEMRPVKQTPAHHTDKFAELVCSNSLRANTLTN 61 Query: 54 GKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILS 113 G L E+ LD ++ + AD+ + PA G DR + + + + + Sbjct: 62 AVGVLKEEMRRLDSVIMKAADSCSV----------PA--GGALAVDRHEFAAKVTQMVTN 109 Query: 114 QENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGR 173 N+ V++ EV T II++ + + LT +L A Sbjct: 110 HPNVTVVREEVTSIPTGPTIIATGPLTSQPLSE-QLQALTGEEYLY-------FYDAAAP 161 Query: 174 MGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI 233 + + S + ++K +D G + I TE++F ER + + Sbjct: 162 IVEKESIDMEKVYIKSRYDKG----------EAAYINCPMTEEEF--ERFYDALISAETV 209 Query: 234 TNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQI 293 ++ E I ++ K + ++ GP +ED R G+R + Sbjct: 210 PLKEFEKEIYFEGCMPIEVMARRGKKTLLF-------GPMKPVGLEDP--RTGKRPFAVV 260 Query: 294 FLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELF 352 L + + G T L Q + IR IPGLE+ I+R G +IN PK L Sbjct: 261 QLRQDDAAGTLYNIVGFQTHLKWGAQKEVIRFIPGLEQAEIVRYGVMHRNTFINSPKLLK 320 Query: 353 PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMI 412 PT + K+ LF AGQ+ G GY E+AA GLVAGIN+A + + F + ++ IG M Sbjct: 321 PTYQYKEREDLFFAGQMTGVEGYVESAASGLVAGINAAHYVLGKELVVFPQ-ETAIGSMA 379 Query: 413 DDLTS 417 +TS Sbjct: 380 HYITS 384 >gi|332295805|ref|YP_004437728.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO [Thermodesulfobium narugense DSM 14796] gi|332178908|gb|AEE14597.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO [Thermodesulfobium narugense DSM 14796] Length = 446 Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 111/446 (24%), Positives = 170/446 (38%), Gaps = 62/446 (13%) Query: 2 INRSYDVI-VIGGGHAGCEAAAVAAKLG---------ASTALITHKTSTIGSMSCNPAIG 51 N+ D I +IG G AG EAA + G HKT + C+ ++G Sbjct: 3 FNKERDRINIIGAGLAGSEAALFLLEKGYLINVYEMRPKVKTPVHKTDLFAELVCSNSLG 62 Query: 52 GL----GKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAM 107 G L EI L + R+A+ + ++ G DRE + + Sbjct: 63 NKNIFSASGLLKEEIKILGSNLIRLAEVSSVE------------AGQALAVDREEFSRHV 110 Query: 108 QREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKL 167 +ILS N++VI+ EV + +N+ +T LT+ + Sbjct: 111 TNKILSYPNVNVIREEVRE------------IPENTFTIVATGPLTSENLFKYFQKFLGS 158 Query: 168 KIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFS 227 K SP + + F F R G A L+ +EK++ Sbjct: 159 KDLYFYDATSPIIKYDSIDLNFAFWANRYNKGDSAYLNCPM-----SEKEY--------- 204 Query: 228 FMTDKITNRQIECGITRTNLETHRIIMEN---IKHSAIYSGDIKSYGPRYCPSIEDKIVR 284 D I+ R++ E I+ A D YGP ++D + Sbjct: 205 ---DFFYEELIKADSIRSHFPDEERYFEGCLPIEELARRGRDTLLYGPLKPRGLKDP--K 259 Query: 285 FGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYD 344 + + L PE + + G T LP + Q + R IP L+ +R G + Sbjct: 260 TNKEPYCVVQLRPENKDKTLFNMVGFQTRLPFKEQDKIFRLIPALKNAEFVRYGVMHKNI 319 Query: 345 YINPKELFP-TLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSR 403 Y NP L +LE+KK + LF AGQI GT GY EA A GL+A IN K + + Sbjct: 320 YFNPSSLIKESLESKKFNNLFFAGQITGTEGYVEAIATGLLAAINLHLKIQGKPHLVLPK 379 Query: 404 TDSYIGVMIDDLTSKGVLEPYRMFTS 429 T + +G +I+ + S V +P M S Sbjct: 380 T-TVLGSLINHIISVSVEKPAPMNVS 404 >gi|319789192|ref|YP_004150825.1| gid protein [Thermovibrio ammonificans HB-1] gi|317113694|gb|ADU96184.1| gid protein [Thermovibrio ammonificans HB-1] Length = 438 Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 109/428 (25%), Positives = 179/428 (41%), Gaps = 67/428 (15%) Query: 10 VIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGG----LGKG 56 VIGGG AG E A AA G+ L H+T + + C+ +GG +G Sbjct: 9 VIGGGLAGVETAWRAANEGSKVRLFEMRPEKTTPAHRTDKLAELVCSNTLGGKEITTPRG 68 Query: 57 HLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQEN 116 L E++ L+ L V +AA KK G DRE + + +I + N Sbjct: 69 LLKAEMELLNSL---VVEAA---------KKTAVPAGGALAVDREKFADYITEKIETHPN 116 Query: 117 LDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVI-HIGKLKIPAGRMG 175 ++VI+ EV + + + +T LT+ TF R + ++G+ ++ Sbjct: 117 IEVIRQEVTQ------------LPEEGITVVATGPLTSDTFSRFLREYLGEEEL---HFY 161 Query: 176 DSPSNSLFNSFMKFD--FDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI 233 D+ S ++ + + F R G L+ T++++ E+ +K+ Sbjct: 162 DAISPIVYADTIDYTKCFWGSRYGKGGDDYLNCPM-----TKEEY--EKFYNALMEAEKV 214 Query: 234 TNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYG---PRYCPSIEDKIVRFGERNG 290 ++ E + E K + ++ G +K G PR +V+ + N Sbjct: 215 PLKEFEKACYFEGCMPIEEMAERGKETLLF-GPLKPVGLIDPRTGKQ-PHAVVQLRKENR 272 Query: 291 HQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PK 349 L G T + YP Q + R IPGLE R G +IN PK Sbjct: 273 EGTLLNLVGFQTKLKYPE----------QKRVFRLIPGLENAEFARYGSIHRNTFINSPK 322 Query: 350 ELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIG 409 L PTL+ KK + AGQI G GY E+AA G+VAG+N++R +N + + R ++ IG Sbjct: 323 LLLPTLQLKKNPKVLFAGQITGVEGYPESAATGIVAGLNASRIANNKEPVVPPR-ETMIG 381 Query: 410 VMIDDLTS 417 ++ +T Sbjct: 382 GLLRYITE 389 >gi|217967907|ref|YP_002353413.1| gid protein [Dictyoglomus turgidum DSM 6724] gi|254789172|sp|B8E2F5|TRMFO_DICTD RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|217337006|gb|ACK42799.1| gid protein [Dictyoglomus turgidum DSM 6724] Length = 439 Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 114/434 (26%), Positives = 166/434 (38%), Gaps = 73/434 (16%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGL----G 54 V +IGGG AG EAA AK + HKT + + C+ + Sbjct: 4 VKIIGGGLAGSEAAWQLAKRKIPVEIYEMRPIVTTPVHKTEYLAELVCSNSFKSTEITNA 63 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L E+ LD L+ RVA+ + PA G DREL+ +Q +L Sbjct: 64 SGLLKEEMRKLDSLLLRVAEETRV----------PA--GVALAVDRELFSKRVQEILLES 111 Query: 115 ENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRM 174 + VI+ EV E +I +T LT+ F ++ + L + Sbjct: 112 PYVTVIREEVKKLPKEGIVI------------VATGPLTSSDFAEHLMEV--LDTDSLYF 157 Query: 175 GDSPSNSLFNSFMKFD--FDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK 232 D+ S ++ + ++ F R G L+ MT + Sbjct: 158 YDAVSPIIYADSINYEKVFSASRYGKGEETYLNCP---------------------MTKE 196 Query: 233 ITNRQIECGITRTNLETHRIIMEN-------IKHSAIYSGDIKSYGPRYCPSIEDKIVRF 285 R +E I +E+H E I+ A D YGP + D + Sbjct: 197 EYERFVEELINAETVESHYPGEEKFFEGCLPIEVLAKRGIDTLRYGPMKPIGLIDP--KT 254 Query: 286 GERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDY 345 G+ + L PE + + G T L + Q + R IPGLE R G Y Sbjct: 255 GKEPYAVVQLRPENIQKTLYSMVGFQTRLKFQEQRRIFRMIPGLENAEFARYGVMHRNTY 314 Query: 346 I-NPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 PK L TL+ K +F AGQ+ G GY E+AA G+VAGIN+AR I T Sbjct: 315 FYAPKFLKATLQFIKDERVFFAGQLIGVEGYMESAAMGIVAGINAARLYKGKPLIILPPT 374 Query: 405 DSYIGVMIDDLTSK 418 + IG +I +T+K Sbjct: 375 -TMIGALISYVTTK 387 >gi|313895653|ref|ZP_07829209.1| tRNA:m(5)U-54 methyltransferase [Selenomonas sp. oral taxon 137 str. F0430] gi|312975779|gb|EFR41238.1| tRNA:m(5)U-54 methyltransferase [Selenomonas sp. oral taxon 137 str. F0430] Length = 443 Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 105/422 (24%), Positives = 173/422 (40%), Gaps = 68/422 (16%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGLG---- 54 VIV+G G AG EAA AA+ GA L HKT + C+ ++ G G Sbjct: 4 VIVVGAGLAGSEAAWQAARRGAEVTLFEMRPGRTSPAHKTDDFAELVCSNSLRGAGLENA 63 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L E+ +D L+ R ADA + PA G DR + + +I + Sbjct: 64 VGVLKEEMRRMDSLIIRAADATAV----------PA--GGALAVDRRRFSRYITEQITAH 111 Query: 115 ENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIH--IGKLKI--- 169 N+ + + E I ++ +++++ ++ LT+G L IH +G + Sbjct: 112 PNISIRREE----------IKAVPRDEDAVVIIASGPLTSGA-LADEIHALLGDDALYFY 160 Query: 170 -PAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSF 228 A + D+ S + ++ R G P+ L+ + D+ + F + Sbjct: 161 DAAAPLVDAASIDMTQAYR-----ASRYGKGEPSYLN--CPMNDREYEAF-------WQA 206 Query: 229 MT--DKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFG 286 +T +K E I ++ K + ++ G +K G + + G Sbjct: 207 LTAAEKADVHDFEKEIFFEGCMPVEVMASRGKDTLLF-GPLKPMGLEHPET--------G 257 Query: 287 ERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI 346 ER+ + L + + G T L Q + R IPGL +R G +I Sbjct: 258 ERSYAVVQLRQDNAEGTIYNIVGFQTRLKWAEQRRVFRMIPGLSHAEFLRYGVMHRNTFI 317 Query: 347 N-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTD 405 N P+ L PT + + + LF AGQ+ G GY E+AA GL AGIN+AR + + F +T Sbjct: 318 NAPRHLRPTFQLRSENTLFFAGQMTGVEGYVESAASGLTAGINAARIAADRTPVVFPQTT 377 Query: 406 SY 407 + Sbjct: 378 CH 379 >gi|114611764|ref|XP_001175241.1| PREDICTED: similar to Mitochondrial translation optimization 1 homolog, partial [Pan troglodytes] Length = 96 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 42/93 (45%), Positives = 55/93 (59%) Query: 141 DNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGT 200 D S + +V+LTTGTFLRG+I IG PAGR+GD PS L + K F GRLKTGT Sbjct: 1 DGSTVYAESVILTTGTFLRGMIVIGLETHPAGRLGDQPSIGLAQTLEKLGFVVGRLKTGT 60 Query: 201 PARLDGKTIIWDKTEKQFADERLIPFSFMTDKI 233 P R+ ++I + K D +PFSF + + Sbjct: 61 PPRIAKESINFSILNKHIPDNPSVPFSFTNETV 93 >gi|218288286|ref|ZP_03492585.1| gid protein [Alicyclobacillus acidocaldarius LAA1] gi|218241645|gb|EED08818.1| gid protein [Alicyclobacillus acidocaldarius LAA1] Length = 437 Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 110/420 (26%), Positives = 159/420 (37%), Gaps = 68/420 (16%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGL----G 54 V VIG G AG EAA AA GA L H T+ + C ++ Sbjct: 4 VTVIGAGLAGSEAAWQAANRGAKVTLYEMRPVQMTPAHHTARFAELVCTNSLRSNSITNA 63 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L E+ LD ++ R ADA + PA G DR+ + + + Sbjct: 64 VGLLKEEMRRLDSVIMRAADAHAV----------PA--GNALAVDRDGFSQRVTELVSQH 111 Query: 115 ENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTF---LRGVIHIGKLKI-- 169 N+ V++ EV E + +T LT+ +R ++ G L Sbjct: 112 PNITVVREEVTEIPKEGVTV------------VATGPLTSPALSEDIRRLVGHGDLYFYD 159 Query: 170 PAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM 229 A + S + F + +D G D I TE++F +F Sbjct: 160 AAAPIVTKESIDMSKVFFQSRYDQG----------DAAYINCPMTEEEFE-------AFY 202 Query: 230 TDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKS--YGPRYCPSIEDKIVRFGE 287 I EC + + E R + A+ ++ +GP + D R G Sbjct: 203 DALI---HAECAELK-DFEEERYFEGCMPIEALAKRGKQTLLFGPMKPVGLRDP--RTGR 256 Query: 288 RNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN 347 R + L + + G T L Q + R IPGLE+ +R G YIN Sbjct: 257 RPFAVVQLRQDNAAATLYNMVGFQTHLKWGEQKRVFRMIPGLEQAEFVRYGVMHRNTYIN 316 Query: 348 -PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDS 406 P L PT + K LF AGQ+ G GY E+AA GL+AGIN+AR + D + F T S Sbjct: 317 SPVALLPTYQAKARPTLFFAGQMTGVEGYVESAASGLIAGINAARVAAGQDALVFPPTTS 376 >gi|223985628|ref|ZP_03635678.1| hypothetical protein HOLDEFILI_02984 [Holdemania filiformis DSM 12042] gi|223962395|gb|EEF66857.1| hypothetical protein HOLDEFILI_02984 [Holdemania filiformis DSM 12042] Length = 436 Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 122/506 (24%), Positives = 189/506 (37%), Gaps = 101/506 (19%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGG----LG 54 V V+G G AGCEAA A+ G + L+ HKT + C+ ++ Sbjct: 5 VTVVGAGLAGCEAAWQLAQRGIAVTLVEMRPEKMTPAHKTGKFAELVCSNSLRSDALTNA 64 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L E+ LD ++ VAD Q++V PA G DRE + A+ ++ Sbjct: 65 VGVLKAEMRRLDSVIMSVAD----QYKV------PA--GSALAVDREAFSEAVTEKVSGH 112 Query: 115 ENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRM 174 ++V+ EV II+S + +++ R +F A + Sbjct: 113 PLIEVVHREVTEIPEGPCIIASGPLTSDALGRQIQAFFDQESFY--------FYDAAAPI 164 Query: 175 GDSPSNSLFNSFMKFDFDTG------------RLKTGTPARLDGKTIIWDKTEKQFADER 222 D S ++ K +D G + + A + ++ + EK+ E Sbjct: 165 IDKDSIDFTQAYYKSRYDKGEADYINCPMDKAQFEAFYDALIHAESAPVHEHEKEIYFEG 224 Query: 223 LIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYG-PRYCPSIEDK 281 +PF M + + G +K G R S Sbjct: 225 CMPFEEMARR-------------------------GEKTLLFGPMKPVGLERPDGSRPYA 259 Query: 282 IVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAI 341 +V+ + N G T + +P Q + +R IPGLE I+R G Sbjct: 260 VVQLRQDNAAASMYNVVGFQTHLKWPE----------QRRILRMIPGLENCEILRYGVMH 309 Query: 342 EYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCIC 400 YIN P L PT +T K LF AGQ+ G GY E+AA GL AGI R L Sbjct: 310 RNSYINSPLCLRPTYQTVKREDLFFAGQMTGVEGYIESAASGLNAGIQCVRLVLGLTPEP 369 Query: 401 FSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERR 460 F +T IG M +T +P +P NA+ + P+ K+ ++ Sbjct: 370 FPQT-CMIGAMAHYITHA---DPKH-----------FQPMNANFGILPLVQKV----KKS 410 Query: 461 QKRFAKYIQEYNFLRSLLKSLVLTSK 486 +++ A IQ N L +SL +K Sbjct: 411 ERKEAYGIQALNELAQFQQSLSWNTK 436 >gi|295399801|ref|ZP_06809782.1| gid protein [Geobacillus thermoglucosidasius C56-YS93] gi|294978204|gb|EFG53801.1| gid protein [Geobacillus thermoglucosidasius C56-YS93] Length = 440 Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 50/110 (45%), Positives = 62/110 (56%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IR IPGLE I+R G +IN PK L PT + K+ LF AG Sbjct: 280 GFQTHLKWGAQKEVIRLIPGLENAEIVRYGVMHRNTFINSPKLLRPTYQYKERDDLFFAG 339 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+AA GLVAGIN+AR D + F R ++ IG M +TS Sbjct: 340 QMTGVEGYVESAASGLVAGINAARLVLGQDLLVFPR-ETAIGSMAHYITS 388 >gi|312111687|ref|YP_003990003.1| gid protein [Geobacillus sp. Y4.1MC1] gi|311216788|gb|ADP75392.1| gid protein [Geobacillus sp. Y4.1MC1] Length = 440 Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 50/110 (45%), Positives = 62/110 (56%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IR IPGLE I+R G +IN PK L PT + K+ LF AG Sbjct: 280 GFQTHLKWGAQKEVIRLIPGLENAEIVRYGVMHRNTFINSPKLLRPTYQYKERDDLFFAG 339 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+AA GLVAGIN+AR D + F R ++ IG M +TS Sbjct: 340 QMTGVEGYVESAASGLVAGINAARLVLGQDLLVFPR-ETAIGSMAHYITS 388 >gi|33861672|ref|NP_893233.1| tRNA (uracil-5-)-methyltransferase Gid [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|81572991|sp|Q7TU75|TRMFO_PROMP RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|33640040|emb|CAE19575.1| NAD binding site:Glucose inhibited division protein A family [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 470 Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 134/526 (25%), Positives = 208/526 (39%), Gaps = 91/526 (17%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIG 51 MI++ VIVIG G AGCEAA A G + L+ H TS + C+ + G Sbjct: 1 MIDKQ--VIVIGAGLAGCEAAWQIANSGIAVKLVEMRPLNSTPAHHTSEFAELVCSNSFG 58 Query: 52 GL----GKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAM 107 L G L E+ + L+ + AD +F V PA G DR + ++ Sbjct: 59 ALSADRAAGLLQEELRTFNSLIIQTAD----KFSV------PA--GGALAVDRSKFSKSL 106 Query: 108 QREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVI--HIG 165 + + + +++ + E +KNI VL TG + I Sbjct: 107 TQTLSAHPFVEISRFEQLDLPNKKNI----------------TVLATGPLTSDELATKIK 150 Query: 166 KLK-IPAGRMGDSPSNSLFNSFMKFD--FDTGRLKTGTPARLDGKTIIWDKTEKQFADER 222 K I + D+ S ++ + + F R G PA L+ + Sbjct: 151 KFTGIDSCHFFDAASPIIYGDSINHEIVFKASRYDKGDPAYLNCPI------------NK 198 Query: 223 LIPFSFMTDKITNRQI---ECGITRTNLETHRIIMENIKHSAIYS---GDIKSYG---PR 273 L F+F I Q + N + +E I I + G +KS G P Sbjct: 199 LDYFNFRNALINGEQASLKDFDKESANFFEACLPIEEIARRGIETMRYGPLKSIGLWNPN 258 Query: 274 YCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVN 333 + + D+ R +R + L E L ++ G T L Q + R IPGLEK Sbjct: 259 WG-DLFDRENRLKKRPHAIVQLRKEDLEGKLLNMVGFQTNLKWSEQKRIFRMIPGLEKAE 317 Query: 334 IIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARK 392 +R G ++ +PK L PTL+ K LF AGQI GT GY AAA GL+AGIN++ Sbjct: 318 FVRFGVMHRNTFLESPKLLLPTLQFLKRETLFAAGQITGTEGYAAAAAGGLLAGINASLL 377 Query: 393 SNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMK 452 + + + F +S IG +++ +++ R + + N+ P+ Sbjct: 378 AKNKNLVTFP-NESMIGSLMNFISN----------------RNEIMSNQKKNKFQPMPAS 420 Query: 453 LGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQD 498 G + E K K ++ + LK L + K L + SFK D Sbjct: 421 FGLVPELTNKIKDKKLRYKAYQERSLKELQVFKKVLDA---SFKND 463 >gi|51892620|ref|YP_075311.1| tRNA (uracil-5-)-methyltransferase Gid [Symbiobacterium thermophilum IAM 14863] gi|81170607|sp|Q67PC6|TRMFO_SYMTH RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|51856309|dbj|BAD40467.1| glucose-inhibited division protein [Symbiobacterium thermophilum IAM 14863] Length = 447 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 44/109 (40%), Positives = 68/109 (62%), Gaps = 2/109 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T+L Q + R IPGLE+ R G ++ +P+ L+PT E+++ +GLF AG Sbjct: 283 GFQTSLKWSEQKRVFRMIPGLEEAEFERYGVIHRNTFMKSPRLLYPTGESRQRAGLFFAG 342 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 Q+ G GY E+AA GLVAGIN+AR++ L+ + F R ++ IG ++ +T Sbjct: 343 QMTGVEGYVESAAGGLVAGINAARRALGLEPVTFPR-ETAIGSLLHYIT 390 >gi|213422911|ref|ZP_03355937.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 47 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 32/46 (69%), Positives = 41/46 (89%) Query: 274 YCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQ 319 YCPSIEDK++RF +RN HQIFLEPEGL ++ +YPNGIST+LP ++Q Sbjct: 1 YCPSIEDKVMRFADRNQHQIFLEPEGLTSNEIYPNGISTSLPFDVQ 46 >gi|239826605|ref|YP_002949229.1| gid protein [Geobacillus sp. WCH70] gi|239806898|gb|ACS23963.1| gid protein [Geobacillus sp. WCH70] Length = 440 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 49/110 (44%), Positives = 62/110 (56%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IR IPGLE I+R G +IN PK L PT + K+ LF AG Sbjct: 280 GFQTHLKWGPQKEVIRLIPGLENAEIVRYGVMHRNTFINSPKLLRPTYQYKERDDLFFAG 339 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+AA GLVAGIN+AR + + F R ++ IG M +TS Sbjct: 340 QMTGVEGYVESAASGLVAGINAARLVLGQELVVFPR-ETAIGSMAHYITS 388 >gi|123966440|ref|YP_001011521.1| tRNA (uracil-5-)-methyltransferase Gid [Prochlorococcus marinus str. MIT 9515] gi|205830320|sp|A2BXA3|TRMFO_PROM5 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|123200806|gb|ABM72414.1| NAD binding site:Glucose inhibited division protein A family [Prochlorococcus marinus str. MIT 9515] Length = 467 Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 118/443 (26%), Positives = 186/443 (41%), Gaps = 66/443 (14%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIG 51 M+N+ +VIVIG G AGCEAA A G L+ H TS G + C+ + G Sbjct: 1 MLNK--EVIVIGAGLAGCEAAWQIANSGVEVKLVEMRPIHSTPAHHTSEFGELVCSNSFG 58 Query: 52 GL----GKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAM 107 L G L E+ + L+ AD +V G A+ R++ + L + Sbjct: 59 ALSTDRAAGLLQEELRTFNSLIINTADE-------FSVPAGGALAVDRSKFSKSLTQTLS 111 Query: 108 QR---EILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHI 164 EI E LD+ +KN I+ I +T LT+ + + Sbjct: 112 NHPLVEIKRFEQLDL---------PDKNRITVI----------ATGPLTSNELANKLKNF 152 Query: 165 GKLKIPAGRMGDSPSNSLFNSFMKFD--FDTGRLKTGTPARLDGKTIIWDKTEKQFADER 222 L + D+ S ++ + +D F R G PA L+ +K + Sbjct: 153 TGLD--SCHFFDAASPIIYGETINYDIAFRASRYDKGDPAYLNCPM---NKIDYLNFRNA 207 Query: 223 LIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYS---GDIKSYG---PRYCP 276 LI T K ++ N + +E + + + G +KS G P++ Sbjct: 208 LIEAEQATLKDFEKE------SANFFEACLPIEEMARRGVDTMRYGPLKSIGLWNPKWG- 260 Query: 277 SIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIR 336 + D+ R +R + L E L ++ G T L Q + R IPGLEK +R Sbjct: 261 DLFDRENRLKKRPHAIVQLRKEDLKGKLLNMVGFQTNLKWSEQKRIFRMIPGLEKAEFVR 320 Query: 337 PGYAIEYDYI-NPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNK 395 G ++ +PK L PTL+ K LF AGQI GT GY AA+ GL+AG+N++ +N Sbjct: 321 FGVMHRNTFLESPKLLLPTLQFLKRENLFAAGQITGTEGYAAAASGGLLAGLNASLLANN 380 Query: 396 LDCICFSRTDSYIGVMIDDLTSK 418 + F +S IG +++ +++K Sbjct: 381 KSPVTFP-DESMIGALMNFISNK 402 >gi|169839563|ref|ZP_02872751.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [candidate division TM7 single-cell isolate TM7a] Length = 67 Score = 78.2 bits (191), Expect = 4e-12, Method: Composition-based stats. Identities = 34/58 (58%), Positives = 46/58 (79%) Query: 335 IRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARK 392 +R GYA+EY+++ +L TLETK + GL+ AG INGT+GYEEAA QG +AG+N+ARK Sbjct: 1 VRYGYAVEYNFVPAHQLKLTLETKVLDGLYTAGTINGTSGYEEAACQGFIAGVNAARK 58 >gi|224476374|ref|YP_002633980.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus carnosus subsp. carnosus TM300] gi|254789176|sp|B9DPG3|TRMFO_STACT RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|222420981|emb|CAL27795.1| glucose-inhibited division protein gid [Staphylococcus carnosus subsp. carnosus TM300] Length = 436 Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 126/508 (24%), Positives = 194/508 (38%), Gaps = 109/508 (21%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGL----G 54 V V+G G AG EAA A+ G LI H T + C+ ++ G Sbjct: 6 VNVVGAGLAGSEAAYQLAQRGIKVNLIEMRPVRQTPAHHTDKFAELVCSNSLRGNSLTNA 65 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L E+ LD L+ + ADAA + PA G DR + + + S Sbjct: 66 VGVLKEEMRRLDSLIIKAADAARV----------PA--GGALAVDRHDFAGYITDTLKSH 113 Query: 115 ENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHI-GKLKI---- 169 N++VI E+ II+ T LTT + ++ I G+ ++ Sbjct: 114 PNVNVINEEIESIPEGYTIIA-------------TGPLTTEGLAKEIVEITGEDQLYFYD 160 Query: 170 PAGRMGDSPSNSLFNSFMKFDFDTGRLK-TGTP-----------ARLDGKTIIWDKTEKQ 217 A + + S + ++K +D G P A L+ + ++ EK+ Sbjct: 161 AAAPIIEKESIDMDKVYLKSRYDKGEAAYLNCPMTEEEFDRFYDAVLEAEAAPVNEFEKE 220 Query: 218 FADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPS 277 E +PF M ++ R L +GP Sbjct: 221 KYFEGCMPFEVMAER----------GRKTL---------------------LFGPMKPVG 249 Query: 278 IEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRP 337 +ED + G+R + L + + G T L Q + IR IPGLE V+I+R Sbjct: 250 LEDP--KTGKRPFAVVQLRQDDAAGTLYNIVGFQTHLKWGAQKEVIRLIPGLENVDIVRY 307 Query: 338 GYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKL 396 G +IN P L T + K L+ AGQ+ G GY E+AA GLVAGIN A K Sbjct: 308 GVMHRNTFINSPDVLSETYQLKGNDHLYFAGQMTGVEGYVESAASGLVAGINVAHKLQDK 367 Query: 397 DCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCI 456 + F R ++ IG M + S A + +P NA+ L P + Sbjct: 368 AEVVFPR-ETMIGSMA-------------YYISHANNNKNFQPMNANFGLVP------SL 407 Query: 457 GERRQKRFAKYIQEYNFLRSLLKSLVLT 484 +R + + +Y Q+ N + L++ T Sbjct: 408 EKRIKDKKERYEQQANRALTYLENFKQT 435 >gi|330719609|gb|EGG98182.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [gamma proteobacterium IMCC2047] Length = 144 Score = 77.4 bits (189), Expect = 6e-12, Method: Composition-based stats. Identities = 38/84 (45%), Positives = 57/84 (67%) Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 V E++ ++ Y Y RQM E + ++ E +P+DF Y +P LSNE+K+KL+ L+P Sbjct: 52 VAEQVVTQAKYEGYINRQMDEIERLRRHEMTRLPEDFVYDDIPGLSNEVKQKLNDLRPET 111 Query: 592 LLQASKIEGMTPAALNLLLIYIKK 615 L AS+I G+TPAA++LLLI +KK Sbjct: 112 LAAASRIPGVTPAAVSLLLIQLKK 135 >gi|290968892|ref|ZP_06560429.1| tRNA:M(5)U-54 methyltransferase [Megasphaera genomosp. type_1 str. 28L] gi|290781188|gb|EFD93779.1| tRNA:M(5)U-54 methyltransferase [Megasphaera genomosp. type_1 str. 28L] Length = 437 Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 45/103 (43%), Positives = 57/103 (55%), Gaps = 1/103 (0%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE+ +R G YIN P+ L PTL+ KK LF AG Sbjct: 280 GFQTHLKFSEQKRVFSMIPGLEEAEFVRYGVMHRNSYINSPELLLPTLQYKKEPRLFFAG 339 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGV 410 Q+ G GY E+AA GL+AGIN+A + CI FSR + G+ Sbjct: 340 QLTGVEGYLESAATGLLAGINAAHCAAGNACITFSRQTAIGGL 382 >gi|172057896|ref|YP_001814356.1| tRNA (uracil-5-)-methyltransferase Gid [Exiguobacterium sibiricum 255-15] gi|205830333|sp|B1YIB2|TRMFO_EXIS2 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|171990417|gb|ACB61339.1| gid protein [Exiguobacterium sibiricum 255-15] Length = 434 Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 44/110 (40%), Positives = 62/110 (56%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IR IPGLE I+R G ++N P L PT +T+ LF AG Sbjct: 277 GFQTHLKWGEQKRIIRLIPGLENAEIVRYGVMHRNTFVNSPNLLQPTYQTRTRHDLFFAG 336 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+AA GL AGIN+AR N+ + + F + ++ +G M +T+ Sbjct: 337 QMTGVEGYVESAASGLTAGINAARLVNEAEPVAFPK-ETMMGAMAHYITT 385 >gi|258511364|ref|YP_003184798.1| gid protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478090|gb|ACV58409.1| gid protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 437 Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 43/99 (43%), Positives = 53/99 (53%), Gaps = 1/99 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE+ +R G YIN P L PT + K LF AG Sbjct: 278 GFQTHLKWGEQKRVFRMIPGLEQAEFVRYGVMHRNTYINSPVALLPTYQAKARPTLFFAG 337 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDS 406 Q+ G GY E+AA GL+AGIN+AR + D + F T S Sbjct: 338 QMTGVEGYVESAASGLIAGINAARVAAGQDALVFPPTTS 376 >gi|292670829|ref|ZP_06604255.1| glucose-inhibited division protein [Selenomonas noxia ATCC 43541] gi|292647450|gb|EFF65422.1| glucose-inhibited division protein [Selenomonas noxia ATCC 43541] Length = 438 Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 110/430 (25%), Positives = 167/430 (38%), Gaps = 65/430 (15%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGLG---- 54 VIV+G G AG EAA AA+ GAS L HKT + C+ ++ G G Sbjct: 4 VIVVGAGLAGSEAAWQAARAGASVELFEMRPLRRSPAHKTDGFAELVCSNSLRGAGLENA 63 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L E+ L L+ + ADA + PA G DR + + + I+ Sbjct: 64 VGVLKEEMRRLGSLIMQAADATAV----------PA--GGALAVDRAEFSDYITQHIVQH 111 Query: 115 ENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTF---LRGVIHIGKLKIPA 171 N+ V E I+ I D+S++ ++ LT G +R ++ L Sbjct: 112 PNISVHHAE----------ITEIPSVDDSVVIIASGPLTDGALSLAIRSLLGDAALYF-- 159 Query: 172 GRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD 231 +P S + M + R G PA ++ E+Q+ D Sbjct: 160 -YDAAAPLVSSSSINMTAVYRASRYGKGEPAYINCPM-----NEEQY------------D 201 Query: 232 KITNRQIECGITRTNLETHRIIMEN---IKHSAIYSGDIKSYGPRYCPSIEDKIVRFGER 288 + + + I E ++ A D YGP +E + GER Sbjct: 202 AFWDALVHAEKAEVHDFEKEIFFEGCMPVEVMAARGKDTLLYGPLKPIGLEHPVT--GER 259 Query: 289 NGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN- 347 + L + + G T L Q + IPGLE+ +R G YIN Sbjct: 260 PHAVVQLRQDNTEGTIYNIVGFQTRLKWPEQKHVFQMIPGLEQAEFLRYGVMHRNTYINA 319 Query: 348 PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSY 407 P+ L PT + +F AGQ+ G GY E+AA GL+AG+N+AR + + F R + Sbjct: 320 PRHLRPTFQLNVNECIFFAGQMTGVEGYVESAASGLMAGLNAARLARGESPLAFPRMTCH 379 Query: 408 IGVMIDDLTS 417 G + +TS Sbjct: 380 -GALAHYITS 388 >gi|312126812|ref|YP_003991686.1| gid protein [Caldicellulosiruptor hydrothermalis 108] gi|311776831|gb|ADQ06317.1| gid protein [Caldicellulosiruptor hydrothermalis 108] Length = 436 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 113/445 (25%), Positives = 168/445 (37%), Gaps = 95/445 (21%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGL---- 53 +++VIG G AG EAA V K G L HK T + C+ ++ Sbjct: 2 EIVVIGAGLAGVEAANVITKFGIKVKLFEMKPKKFSPAHKIDTFAELVCSNSLKSKLLTN 61 Query: 54 GKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILS 113 G L E+ L+ A A ++ G DR + + ++I Sbjct: 62 ASGLLKEEMKVFGSLVMEAAQATSVE------------AGQALAVDRYKFSEYITQKIKQ 109 Query: 114 QENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGR 173 E ++VI EV TE V +D ++ C T LTT + L + Sbjct: 110 NELIEVIHEEV----TE-------VPRDKVVVVC-TGPLTTESLLSDI------------ 145 Query: 174 MGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI 233 + L +S + FD P L K D F+ +K Sbjct: 146 ------SKLCSSKNLYFFDAA-----APIVL-----------KDSIDFSKAFFASRYNKG 183 Query: 234 TNRQIECGITRTNLETHRIIMENIKHSAIYSGDI-KSYGPRYCPSIED------KIVRFG 286 +N I C +T+ E R E + I D K C IE+ +RFG Sbjct: 184 SNDYINCPMTKE--EYERFYWELVNAEVIEVKDFEKDLLFEGCMPIEEMARRGIDTIRFG 241 Query: 287 E---------RNGHQIF----LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVN 333 R G + L + + + G T L Q + R IPGLE Sbjct: 242 PLKPVGIIDPRTGKMPYAVVQLRKDTQDGKLYNMVGFQTRLKWGEQKRVFRLIPGLENAE 301 Query: 334 IIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARK 392 +R G + YIN P+ L L KK +F AGQI G GY E+AA G++AGIN+AR+ Sbjct: 302 FVRYGVMHKNSYINSPEVLTKYLFLKKYPNIFFAGQITGVEGYLESAATGIIAGINAARQ 361 Query: 393 SNKLDCICFSRTDSYIGVMIDDLTS 417 + + ++ IG +I+ +T+ Sbjct: 362 VLGKEPVSLP-PNTCIGALIEYITT 385 >gi|148265708|ref|YP_001232414.1| tRNA (uracil-5-)-methyltransferase Gid [Geobacter uraniireducens Rf4] gi|205830335|sp|A5G7S3|TRMFO_GEOUR RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|146399208|gb|ABQ27841.1| gid protein [Geobacter uraniireducens Rf4] Length = 435 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 105/432 (24%), Positives = 172/432 (39%), Gaps = 71/432 (16%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDG 67 + +IG G AGCEAA AA G + L K P + L + +R ++L+ Sbjct: 6 LTIIGAGLAGCEAAWQAAGRGVAVTLHEMKPEKYSPAHHLPGLAELVCSNSLRG-ESLEN 64 Query: 68 LMGRVADAAGIQFRVLN---VKKGPAVRGPRTQA---DRELYRLAMQREILSQENLDVIQ 121 +G + + + R L ++ A R P A DR L+ + +I + ++V+ Sbjct: 65 AVGLLKE----ELRRLGSLFMEAALATRVPAGGALAVDRGLFSAFITDKIENHPLIEVVH 120 Query: 122 GEVAGFNTEKNII-SSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKL----------KIP 170 GEVA + +I +S + +++ +++ TG +L I + Sbjct: 121 GEVAEIPADGTVIVASGPLTSDAL--AASIGKYTGDYLYFYDAIAPIVTSDSIDLSKAFR 178 Query: 171 AGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT 230 A R G + N D K A L + + + EK E +P M Sbjct: 179 ASRYGKGDGDDYLNC----PLDEAEYKAFIAALLAAEKVAAKEFEKVVHFEGCMPIEEMA 234 Query: 231 DKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYG---PRYCPSIE-DKIVRFG 286 ++ L+T R G +K G PR IE +V+ Sbjct: 235 ER-------------GLDTLRF------------GPMKPVGLIDPRT--GIEPHAVVQLR 267 Query: 287 ERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI 346 + N G T + YP Q + RTIPGL K +R G +I Sbjct: 268 QENREGTLFNLVGFQTKLTYPE----------QQRIFRTIPGLGKAEFVRLGSMHRNTFI 317 Query: 347 N-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTD 405 N P+ L T + K+ + AGQI G GY E+AA G +AG+N AR + K + + + Sbjct: 318 NAPQLLLSTFQLKREPRILFAGQITGVEGYVESAASGFLAGLNGARLA-KGEALIVPPSV 376 Query: 406 SYIGVMIDDLTS 417 + +G +++ +TS Sbjct: 377 TALGALVNHITS 388 >gi|222054658|ref|YP_002537020.1| gid protein [Geobacter sp. FRC-32] gi|254789173|sp|B9M5T8|TRMFO_GEOSF RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|221563947|gb|ACM19919.1| gid protein [Geobacter sp. FRC-32] Length = 437 Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 108/428 (25%), Positives = 162/428 (37%), Gaps = 67/428 (15%) Query: 10 VIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR--EIDALDG 67 +IGGG AGCEAA AA+ G + L K P + L + +R +D G Sbjct: 8 IIGGGLAGCEAAWQAAERGVAVKLHEMKPERYSPAHHLPGLAELVCSNSLRGESLDNAVG 67 Query: 68 LMGRVADAAGIQFRVLNVKKGPAVRGPRTQA---DRELYRLAMQREILSQENLDVIQGEV 124 L+ +G F + A R P A DR+L+ + +I + ++V+ GEV Sbjct: 68 LLKEELKRSGSLF----IAAALATRVPAGGALAVDRQLFSDYITEKITNHPLIEVVYGEV 123 Query: 125 AGFNTEK-NIISSIVMQDNSMIRCSTVVLTTGTFL-----------RGVIHIGKLKIPAG 172 A E I++S + + + +++ TG +L I GK A Sbjct: 124 AQIPEEGIVIVASGPLTSDRL--AASIATHTGNYLYFYDAIAPIVTADSIDFGK-AFRAS 180 Query: 173 RMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK 232 R G + N M D K A L G + EK E +P M ++ Sbjct: 181 RYGKGDGDDYLNCPM----DETTYKAFVAALLGGDKVAAKDFEKVVHFEGCMPIEEMAER 236 Query: 233 ITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYG-PRYCPSIED-KIVRFGERNG 290 ET R G +K G P +E +V+ + N Sbjct: 237 -------------GPETLRF------------GPMKPVGLPDPRTGVEPYAVVQLRQENR 271 Query: 291 HQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PK 349 G T + Y Q + IPGLE + +R G +IN P+ Sbjct: 272 DGTLFNLVGFQTKLTYSE----------QKRIFSLIPGLEHADFVRLGSMHRNTFINAPQ 321 Query: 350 ELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIG 409 L PT + K + AGQI G GY E+A G +AGIN AR + K + + +G Sbjct: 322 LLLPTFQLKNTPRILFAGQITGVEGYVESAGSGFMAGINVARLA-KGGALTVPPPTTALG 380 Query: 410 VMIDDLTS 417 ++ +TS Sbjct: 381 ALVHHITS 388 >gi|147677582|ref|YP_001211797.1| tRNA (uracil-5-)-methyltransferase Gid [Pelotomaculum thermopropionicum SI] gi|189040808|sp|A5D2W5|TRMFO_PELTS RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|146273679|dbj|BAF59428.1| NAD(FAD)-utilizing enzyme possibly [Pelotomaculum thermopropionicum SI] Length = 437 Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 51/139 (36%), Positives = 68/139 (48%), Gaps = 3/139 (2%) Query: 270 YGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGL 329 YGP + D R G R + L E + G T L + Q + R IPGL Sbjct: 243 YGPMKPVGLIDP--RTGRRPYAVVQLRQENAAATLFNMVGFQTGLKWDEQKRVFRLIPGL 300 Query: 330 EKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGIN 388 E+ +R G +IN P L PT +T+K LF AGQI G GY E+AA GL+AGIN Sbjct: 301 EEAEFVRFGVMHRNTFINSPVLLHPTFQTRKNPALFFAGQITGVEGYVESAASGLMAGIN 360 Query: 389 SARKSNKLDCICFSRTDSY 407 +AR + + F R ++ Sbjct: 361 AARLLAGKEPLVFPRNTAH 379 >gi|56964042|ref|YP_175773.1| tRNA (uracil-5-)-methyltransferase Gid [Bacillus clausii KSM-K16] gi|81170595|sp|Q5WFP8|TRMFO_BACSK RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|56910285|dbj|BAD64812.1| glucose inhibited division protein Gid [Bacillus clausii KSM-K16] Length = 436 Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 58/174 (33%), Positives = 87/174 (50%), Gaps = 22/174 (12%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IR IPGLE +I+R G ++N P L PT ++KK S LF AG Sbjct: 280 GFQTHLKWGPQKEVIRMIPGLENADIVRYGVMHRNTFLNSPNLLKPTYQSKKRSDLFFAG 339 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 Q+ G GY E+AA GLVAGIN+ + + + F ++ IG M +T+ Sbjct: 340 QMTGVEGYVESAAAGLVAGINAFKWTQSQELAVFPE-ETMIGSMAAYITNANAK------ 392 Query: 428 TSRAEYRISLRPDNADNRLT-PIGMKLGCIGERRQ---KRFAKYIQEYNFLRSL 477 + +P NA+ L P+ +++ ER + KR + IQ NF++ + Sbjct: 393 --------TFQPMNANFGLVPPLNVRIKAKKERYEALAKRALESIQ--NFMKEV 436 >gi|312792640|ref|YP_004025563.1| gid protein [Caldicellulosiruptor kristjanssonii 177R1B] gi|312179780|gb|ADQ39950.1| gid protein [Caldicellulosiruptor kristjanssonii 177R1B] Length = 436 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 106/445 (23%), Positives = 171/445 (38%), Gaps = 95/445 (21%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGL---- 53 +++VIG G AG EAA AK G L HK T + C+ ++ Sbjct: 2 EIVVIGAGLAGVEAANAIAKFGIKVKLFEMKPKKFSPAHKIDTFAELVCSNSLKSKLLTN 61 Query: 54 GKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILS 113 G L E+ L+ A+A ++ G DR + + ++I Sbjct: 62 ASGLLKEEMKVFGSLVMEAAEATSVE------------AGQALAVDRYKFSEYITQKIRQ 109 Query: 114 QENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGR 173 E ++VI EV TE V +D ++ C T LTT + L + + Sbjct: 110 NELIEVIHEEV----TE-------VPRDKVVVVC-TGPLTTESLLSDI----------SK 147 Query: 174 MGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI 233 + +S + F++ P L K D F+ +K Sbjct: 148 LCESKNLYFFDA-------------AAPIVL-----------KDSIDFSKAFFASRYNKG 183 Query: 234 TNRQIECGITRTNLE--------THRIIMENIKHSAIYSG------------DIKSYGPR 273 +N I C +T+ E I +++ + ++ G D +GP Sbjct: 184 SNDYINCPMTKEEYEKFYWELVNAEVIEVKDFEKDLLFEGCMPIEEMARRGIDTMRFGPL 243 Query: 274 YCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVN 333 I D R G+ + L + + + G T L Q + R IPGLE Sbjct: 244 KPVGIIDP--RTGKMPYAVVQLRKDTQDGKLYNMVGFQTRLKWGEQKRVFRLIPGLENAE 301 Query: 334 IIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARK 392 +R G + YIN P+ L L KK +F AGQI G GY E+A+ G++AGIN+AR+ Sbjct: 302 FVRYGVMHKNSYINSPEVLTKYLFLKKYPNIFFAGQITGVEGYLESASTGIIAGINAARQ 361 Query: 393 SNKLDCICFSRTDSYIGVMIDDLTS 417 + + + + IG +I+ +T+ Sbjct: 362 VLGKEPVSLP-SSTCIGALIEYITT 385 >gi|15615029|ref|NP_243332.1| tRNA (uracil-5-)-methyltransferase Gid [Bacillus halodurans C-125] gi|26006776|sp|Q9KA24|TRMFO_BACHD RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|10175086|dbj|BAB06185.1| glucose-inhibited division protein [Bacillus halodurans C-125] Length = 435 Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 46/110 (41%), Positives = 61/110 (55%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + I+ IPGLE I+R G +IN P L PT + KK LF AG Sbjct: 279 GFQTHLKWGPQKEVIQLIPGLENAEIVRYGVMHRNTFINSPNLLKPTYQYKKRKDLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 QI G GY E+AA GLVAG+N+AR + + F T + +G M + +T+ Sbjct: 339 QITGVEGYVESAAAGLVAGLNAARLVQSKELVVFPDT-TMLGSMANYITT 387 >gi|320353067|ref|YP_004194406.1| gid protein [Desulfobulbus propionicus DSM 2032] gi|320121569|gb|ADW17115.1| gid protein [Desulfobulbus propionicus DSM 2032] Length = 443 Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 39/94 (41%), Positives = 57/94 (60%), Gaps = 11/94 (11%) Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLET 357 G T + YP Q + RTIPGLE+ +R G ++ P+ L PTLET Sbjct: 284 GFQTKLTYPE----------QQRVFRTIPGLERAVFLRLGSIHRNTFVCAPRVLAPTLET 333 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSAR 391 ++++GLF+AGQ++G GY E+A+ GL+AGIN+ R Sbjct: 334 RRVAGLFVAGQLSGVEGYIESASMGLLAGINAGR 367 Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 13/90 (14%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGG 52 + R + VIGGG AGCEAA AA G + L H+ +G + C+ ++ Sbjct: 1 MAREARITVIGGGLAGCEAAWQAAAQGVAVELYEMKPHRFSPAHELPQLGELVCSNSLRS 60 Query: 53 ----LGKGHLVREIDALDGLMGRVADAAGI 78 G L E+ LD L+ R AD+ + Sbjct: 61 NAVDSAAGLLKEEMRRLDSLVMRAADSTAV 90 >gi|302389649|ref|YP_003825470.1| gid protein [Thermosediminibacter oceani DSM 16646] gi|302200277|gb|ADL07847.1| gid protein [Thermosediminibacter oceani DSM 16646] Length = 437 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 44/110 (40%), Positives = 61/110 (55%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T+L Q + IPGL+ +R G+ +I +PK + P LE K SGLF AG Sbjct: 277 GFQTSLKWPEQKRVFSKIPGLKDPEFVRYGFIHRNTFIMSPKFMQPWLELKTTSGLFFAG 336 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 QI G GY E+AA G+VAG+N R+ LD I F ++ +G + +TS Sbjct: 337 QITGVEGYIESAASGIVAGVNMVRRLKGLDPITFP-LETVVGSLCHYITS 385 >gi|114566377|ref|YP_753531.1| gid protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|122318545|sp|Q0AYP4|TRMFO_SYNWW RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|114337312|gb|ABI68160.1| gid protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 436 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 43/110 (39%), Positives = 61/110 (55%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q + R IPGLE+ +R G YIN PK L+P+L+ KK +F AG Sbjct: 278 GFQTRMRWGEQERIFRLIPGLEQAEFVRYGVMHRNTYINSPKLLWPSLQCKKRPEIFFAG 337 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 QI G GY E+AA G++AGIN+AR + + IG ++D ++S Sbjct: 338 QITGVEGYMESAATGIIAGINAARWLQG-KALLTPHKATIIGALLDFISS 386 Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust. Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 26/143 (18%) Query: 8 VIVIGGGHAGCEAAAVAAKLG---------ASTALITHKTSTIGSMSCNPAIGG----LG 54 V VIGGG AGCEAA A+ G A H+T+ +G + C+ ++ Sbjct: 4 VNVIGGGLAGCEAAYYLAQKGIRVRLWEMRPQKATAVHRTADLGELVCSNSLKSDQPNTA 63 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 +G L RE+ L L+ A+ A + PA G DREL+ + + IL+ Sbjct: 64 QGLLKREMRILGSLLLSCAEKARV----------PA--GSALAVDRELFAGLVSQAILAC 111 Query: 115 ENLDVIQGEVAGFNT-EKNIISS 136 ++++ + EV T E +I++S Sbjct: 112 PSIELCREEVNRVPTGELSIVAS 134 >gi|225181362|ref|ZP_03734806.1| gid protein [Dethiobacter alkaliphilus AHT 1] gi|225167943|gb|EEG76750.1| gid protein [Dethiobacter alkaliphilus AHT 1] Length = 438 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 43/100 (43%), Positives = 55/100 (55%), Gaps = 1/100 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE R G YIN PK L PTL+ K+ LF AG Sbjct: 281 GFQTRLRWPEQKRVFRMIPGLENAEFARYGVMHRNTYINSPKTLQPTLQFKENDKLFFAG 340 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSY 407 Q+ G GY E+AA GLVAGIN+AR ++ D + + ++ Sbjct: 341 QVTGVEGYVESAAMGLVAGINAARVADGQDPLVWPNETAH 380 >gi|154686029|ref|YP_001421190.1| tRNA (uracil-5-)-methyltransferase Gid [Bacillus amyloliquefaciens FZB42] gi|171855000|sp|A7Z4N3|TRMFO_BACA2 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|154351880|gb|ABS73959.1| Gid [Bacillus amyloliquefaciens FZB42] Length = 435 Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 45/110 (40%), Positives = 64/110 (58%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + ++ IPGLE V+I+R G +IN P L PT + K+ + LF AG Sbjct: 279 GFQTHLKWGDQKEVLKLIPGLENVDIVRYGVMHRNTFINSPSLLNPTYQFKQRNDLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+AA GLVAGIN+A+ D + F + ++ IG M +T+ Sbjct: 339 QMTGVEGYVESAASGLVAGINAAKLVLGQDLVTFPQ-ETAIGSMAHYITT 387 >gi|308173575|ref|YP_003920280.1| tRNA:m(5)U-54 methyltransferase [Bacillus amyloliquefaciens DSM 7] gi|307606439|emb|CBI42810.1| tRNA:m(5)U-54 methyltransferase [Bacillus amyloliquefaciens DSM 7] gi|328553492|gb|AEB23984.1| tRNA (uracil-5-)-methyltransferase Gid [Bacillus amyloliquefaciens TA208] gi|328911716|gb|AEB63312.1| m(5)U-54 methyltransferase [Bacillus amyloliquefaciens LL3] Length = 435 Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 45/110 (40%), Positives = 64/110 (58%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + ++ IPGLE V+I+R G +IN P L PT + K+ + LF AG Sbjct: 279 GFQTHLKWGDQKEVLKLIPGLENVDIVRYGVMHRNTFINSPSLLNPTYQFKQRNDLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+AA GLVAGIN+A+ D + F + ++ IG M +T+ Sbjct: 339 QMTGVEGYVESAASGLVAGINAAKLVLGQDLVTFPQ-ETAIGSMAHYITT 387 >gi|312898772|ref|ZP_07758161.1| tRNA:M(5)U-54 methyltransferase [Megasphaera micronuciformis F0359] gi|310620203|gb|EFQ03774.1| tRNA:M(5)U-54 methyltransferase [Megasphaera micronuciformis F0359] Length = 437 Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 42/123 (34%), Positives = 62/123 (50%), Gaps = 11/123 (8%) Query: 282 IVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAI 341 +V+ + NG G T + +P Q + IPGLE+ +R G Sbjct: 263 VVQLRQDNGSATLYNIVGFQTHLKFPE----------QKRVFSMIPGLEEAEFVRYGVMH 312 Query: 342 EYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCIC 400 YIN P+ L PTL+ +K LF AGQ+ G GY E+A+ GL+AGIN+A+ + C+ Sbjct: 313 RNSYINSPELLLPTLQYRKRDSLFFAGQLTGVEGYLESASMGLLAGINAAKLCKEEACVT 372 Query: 401 FSR 403 F + Sbjct: 373 FPK 375 >gi|322382310|ref|ZP_08056217.1| tRNA (uracil-5-)-methyltransferase Gid-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153663|gb|EFX46038.1| tRNA (uracil-5-)-methyltransferase Gid-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 442 Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 44/110 (40%), Positives = 59/110 (53%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE +R G +IN PK L PT + K LF AG Sbjct: 280 GFQTHLKWGEQKRVFSMIPGLENAEFVRYGVMHRNTFINSPKLLEPTYQFKHRPSLFFAG 339 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+AA GL+AGIN+AR + C+ F R ++ +G M +T+ Sbjct: 340 QMTGVEGYVESAASGLIAGINAARLAKGESCLTFPR-ETALGGMAHYITT 388 >gi|311068134|ref|YP_003973057.1| tRNA (uracil-5-)-methyltransferase Gid [Bacillus atrophaeus 1942] gi|310868651|gb|ADP32126.1| tRNA (uracil-5-)-methyltransferase Gid [Bacillus atrophaeus 1942] Length = 435 Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 45/110 (40%), Positives = 63/110 (57%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + ++ IPGLE V I+R G +IN P L PT + K S LF AG Sbjct: 279 GFQTHLKWGDQKEVLKLIPGLENVEIVRYGVMHRNTFINSPSLLEPTYQFKNRSDLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+AA GLVAGIN+A+ + + + F + ++ IG M +T+ Sbjct: 339 QMTGVEGYVESAASGLVAGINAAKLVLEQELVTFPQ-ETAIGSMAHYITT 387 >gi|81428598|ref|YP_395598.1| hypothetical protein LSA0987 [Lactobacillus sakei subsp. sakei 23K] gi|78610240|emb|CAI55289.1| Hypotehtical protein, GidA family (C-terminal fragment) [Lactobacillus sakei subsp. sakei 23K] Length = 186 Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 48/137 (35%), Positives = 70/137 (51%), Gaps = 2/137 (1%) Query: 281 KIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYA 340 KI R GE+ + L + + G T L Q + R IPGLE +R G Sbjct: 2 KIPRLGEQPYAVVQLRQDNAAASLYNIVGFQTHLKWGEQKRVFRMIPGLENAEFVRYGVM 61 Query: 341 IEYDYI-NPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCI 399 ++ +P L PT ++K+ S LF AGQ+ G GY E+AA GLVAGIN++R + + + Sbjct: 62 HRNTFMKSPDVLLPTYQSKQRSDLFFAGQMTGVEGYVESAASGLVAGINASRLALDTEPV 121 Query: 400 CFSRTDSYIGVMIDDLT 416 F T + +G M +T Sbjct: 122 TFPATTA-MGSMAHYIT 137 >gi|89098653|ref|ZP_01171535.1| glucose-inhibited division protein A [Bacillus sp. NRRL B-14911] gi|89086615|gb|EAR65734.1| glucose-inhibited division protein A [Bacillus sp. NRRL B-14911] Length = 435 Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 103/434 (23%), Positives = 167/434 (38%), Gaps = 80/434 (18%) Query: 10 VIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGL----GKG 56 VIG G AG EAA AK G L H T + C+ ++ G Sbjct: 8 VIGAGLAGSEAAWQIAKRGIKVNLYEMRPVKQTPAHHTDKFAELVCSNSLRANNLTNAVG 67 Query: 57 HLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQEN 116 L E+ LD ++ ADA + PA G DR + + ++ + N Sbjct: 68 VLKEEMRMLDSVIINSADACAV----------PA--GGALAVDRHEFAGKVTEQVRNHPN 115 Query: 117 LDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGD 176 + V+ EV +I++ + S+ + L G H+ A + + Sbjct: 116 VTVMNEEVTEIPEGITVIATGPLTSESLSKQLKE-------LTGEDHL-YFYDAAAPIIE 167 Query: 177 SPSNSLFNSFMKFDFDTGR------------LKTGTPARLDGKTIIWDKTEKQFADERLI 224 S ++ +++K +D G +T A + +T+ + EK+ E + Sbjct: 168 KDSINMEKAYLKSRYDKGEAAYINCPMTEEEFETFYNALISAETVPLKEFEKEIFFEGCM 227 Query: 225 PFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVR 284 P M ++ + +GP +ED R Sbjct: 228 PIEVMANRGKKTML-------------------------------FGPMKPVGLEDP--R 254 Query: 285 FGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYD 344 G+R + L + + G T L Q + +R IPGLE+ I+R G Sbjct: 255 TGKRPYAVVQLRQDDAAGTLYNIVGFQTHLKWGPQKEVLRLIPGLEEAEIVRYGVMHRNT 314 Query: 345 YIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSR 403 +IN PK L T + + GLF AGQ+ G GY E+AA GL+AGIN+AR + + + F Sbjct: 315 FINSPKVLEATYQFRNRDGLFFAGQMTGVEGYVESAASGLIAGINAARLAEGKELLEFPH 374 Query: 404 TDSYIGVMIDDLTS 417 ++ IG M +T+ Sbjct: 375 -ETAIGSMARYITT 387 >gi|312865306|ref|ZP_07725534.1| tRNA:m(5)U-54 methyltransferase [Streptococcus downei F0415] gi|311099417|gb|EFQ57633.1| tRNA:m(5)U-54 methyltransferase [Streptococcus downei F0415] Length = 443 Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 42/99 (42%), Positives = 55/99 (55%), Gaps = 1/99 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE +R G Y++ P L PT ++KK + LF AG Sbjct: 288 GFQTHLKWGEQKRVFRMIPGLENAEFVRYGVMHRNFYMDSPNLLTPTFQSKKQANLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDS 406 Q+ G GY E+AA GLVAGIN+AR N + + F T + Sbjct: 348 QMTGVEGYVESAASGLVAGINAARLFNGQEPLIFPETTA 386 >gi|167465453|ref|ZP_02330542.1| Gid [Paenibacillus larvae subsp. larvae BRL-230010] Length = 314 Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 44/110 (40%), Positives = 59/110 (53%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE +R G +IN PK L PT + K LF AG Sbjct: 152 GFQTHLKWGEQKRVFSMIPGLENAEFVRYGVMHRNTFINSPKLLEPTYQFKHRPSLFFAG 211 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+AA GL+AGIN+AR + C+ F R ++ +G M +T+ Sbjct: 212 QMTGVEGYVESAASGLIAGINAARLAKGESCLTFPR-ETALGGMAHYITT 260 >gi|222530146|ref|YP_002574028.1| tRNA (uracil-5-)-methyltransferase Gid [Caldicellulosiruptor bescii DSM 6725] gi|254789164|sp|B9MM32|TRMFO_ANATD RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|222456993|gb|ACM61255.1| gid protein [Caldicellulosiruptor bescii DSM 6725] Length = 436 Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 115/505 (22%), Positives = 186/505 (36%), Gaps = 110/505 (21%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGL---- 53 +++VIG G AG EAA V +K G L HK + C+ ++ Sbjct: 2 EIVVIGAGLAGVEAANVISKFGIKVKLFEMKPKKFSPAHKIDNFAELVCSNSLKSKLLTN 61 Query: 54 GKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILS 113 G L E+ L+ A+A ++ G DR + + + I Sbjct: 62 ASGLLKEEMKVFGSLVMEAAEATSVE------------AGQALAVDRYKFSEYITQRIKH 109 Query: 114 QENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGR 173 + +I EV +K ++ ST LTT + L + Sbjct: 110 NGLISIIHEEVTEVPRDKVVV------------VSTGPLTTESLLSDI------------ 145 Query: 174 MGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI 233 + L NS + FD P L K D F+ +K Sbjct: 146 ------SKLCNSKNLYFFDAA-----APIVL-----------KDSIDFSKAFFASRYNKG 183 Query: 234 TNRQIECGITRTNLE--------THRIIMENIKHSAIYSG------------DIKSYGPR 273 +N I C +T+ E I +++ + ++ G D YGP Sbjct: 184 SNDYINCPMTKEEYERFYWELVNAEVIEVKDFEKDLLFEGCMPIEEMARRGIDTMRYGPL 243 Query: 274 YCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVN 333 I D R G+ + L + + + G T L Q + R IPGLE Sbjct: 244 KPVGIIDP--RTGKMPYAVVQLRKDTQDGKLYNMVGFQTRLKWSEQKRVFRLIPGLENAE 301 Query: 334 IIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARK 392 +R G + YIN P+ L L KK +F AGQI G GY E+A+ G++AGIN+AR+ Sbjct: 302 FVRYGVMHKNSYINSPEVLTKYLFLKKYPNIFFAGQITGVEGYLESASTGIIAGINAARQ 361 Query: 393 SNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMK 452 + I ++ IG +I+ +T+ P + F +P NA+ + I + Sbjct: 362 ILGKEPISLP-PNTCIGALIEYITT-----PKKDF----------QPMNANYGIISIDDE 405 Query: 453 LGCIGERRQKRFAKYIQEYNFLRSL 477 + I ++ +++ + N R L Sbjct: 406 ISKIKDKEKRKLLIAQKSLNICREL 430 >gi|222151084|ref|YP_002560238.1| glucose-inhibited division protein gid [Macrococcus caseolyticus JCSC5402] gi|222120207|dbj|BAH17542.1| glucose-inhibited division protein gid [Macrococcus caseolyticus JCSC5402] Length = 433 Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 107/430 (24%), Positives = 160/430 (37%), Gaps = 80/430 (18%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGLG---- 54 V +IG G AG EAA AK G L H T + C+ ++ G Sbjct: 4 VNIIGAGLAGSEAAYQLAKRGIKVKLYEMRPVKQTPAHHTDKFAELVCSNSLRGNALTNA 63 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L E+ LD L+ + AD A + PA G DR + + + Sbjct: 64 VGVLKEEMRRLDSLIIKAADNASV----------PA--GGALAVDRHEFSGYVTDTLKQH 111 Query: 115 ENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRM 174 N++VI E+ II++ + S+ + L G H+ A + Sbjct: 112 ANIEVINEEITEIPDGPTIIATGPLTTESLSKQIQA-------LTGQDHL-YFYDAAAPI 163 Query: 175 GDSPSNSLFNSFMKFDFDTGR------------LKTGTPARLDGKTIIWDKTEKQFADER 222 + S + ++K +D G T A L+ + + + EK+ E Sbjct: 164 IEKDSIDMDKVYLKSRYDKGEAAYLNCPMTEEEFNTFYDALLEAEVVPLKEFEKEIYFEG 223 Query: 223 LIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKI 282 +PF M + R L +GP +ED Sbjct: 224 CMPFEEMAKR----------GRKTL---------------------LFGPMKPVGLEDP- 251 Query: 283 VRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIE 342 + G+R + L + + G T L Q + ++ IPGLE V ++R G Sbjct: 252 -KTGKRPYAVVQLRQDDAAGTLYNIVGFQTHLKWGAQKEILKLIPGLENVEVVRYGVMHR 310 Query: 343 YDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICF 401 +IN P L T + K LFLAGQ+ G GY E+AA GLVAGIN A+ I F Sbjct: 311 NTFINSPTNLQQTYQFKGNDSLFLAGQMTGVEGYVESAASGLVAGINMAKYVEDKPVITF 370 Query: 402 SRTDSYIGVM 411 ++ IG M Sbjct: 371 PE-NTVIGSM 379 >gi|73662826|ref|YP_301607.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|82592878|sp|Q49X36|TRMFO_STAS1 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|72495341|dbj|BAE18662.1| glucose-inhibited division protein [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 435 Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 108/430 (25%), Positives = 163/430 (37%), Gaps = 80/430 (18%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGLG---- 54 V V+G G AG EAA A+ G LI H T + C+ ++ G Sbjct: 5 VNVVGAGLAGSEAAYQLAQRGVKVNLIEMRPVKQTPAHHTDKFAELVCSNSLRGNALTNA 64 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L E+ LD L+ AD A + PA G DR + + + + Sbjct: 65 VGVLKEEMRQLDSLIISAADKARV----------PA--GGALAVDRHDFAGYVTETLKNH 112 Query: 115 ENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRM 174 N+ V+ E+ II++ + + + + +V TG + ++ P + Sbjct: 113 PNITVLNEEINSIPEGYTIIATGPLTTDKL--ANEIVEATG---KDQLYFYDAAAP---I 164 Query: 175 GDSPSNSLFNSFMKFDFDTGR------------LKTGTPARLDGKTIIWDKTEKQFADER 222 + S + ++K +D G T A ++ + ++ EK+ E Sbjct: 165 IEKDSIDMNKVYLKSRYDKGEAAYLNCPMTEDEFNTFYDALMEAEVAPVNEFEKEKYFEG 224 Query: 223 LIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKI 282 +PF M ++ R L +GP +ED Sbjct: 225 CMPFEVMAER----------GRKTL---------------------LFGPMKPVGLEDP- 252 Query: 283 VRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIE 342 + GER + L + + G T L Q IR IPGLE V I+R G Sbjct: 253 -KTGERPYAVVQLRQDDAAGTLYNIVGFQTHLKWGAQKDVIRLIPGLENVEIVRYGVMHR 311 Query: 343 YDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICF 401 +IN P L T E K L+ AGQ+ G GY E+AA GLVAGIN A K + F Sbjct: 312 NTFINSPDVLTETYELKGREELYFAGQMTGVEGYVESAASGLVAGINVAHKMLNKGEVIF 371 Query: 402 SRTDSYIGVM 411 R ++ IG M Sbjct: 372 PR-ETMIGSM 380 >gi|197119083|ref|YP_002139510.1| tRNA (uracil-5-)-methyltransferase Gid [Geobacter bemidjiensis Bem] gi|259547951|sp|B5EHR5|TRMFO_GEOBB RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|197088443|gb|ACH39714.1| tRNA (5-methyl-U54)-methylenetransferase/reductase [Geobacter bemidjiensis Bem] Length = 435 Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 115/454 (25%), Positives = 185/454 (40%), Gaps = 83/454 (18%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALD 66 ++ VIGGG AGCEAA AAK G L K + P + L + +R D+L+ Sbjct: 4 EITVIGGGLAGCEAAWQAAKRGVKVRLFEMKPNCYSEAHHLPGLSELVCSNSLRG-DSLE 62 Query: 67 GLMGRVADAAGIQFRVLNVKKGPAVRGPRTQA---DRELYRLAMQREILSQENLDVIQGE 123 +G + + + + L ++ A + P A DR+L+ + I S ++V++ E Sbjct: 63 NAVGLLKEELR-RLQSLFMEGAEATKVPAGGALAVDRDLFSQYITSRIESHPLIEVVREE 121 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVI--HIGKLKIPAGRMGDSPSNS 181 V E VVL +G G++ IG+L D+ + Sbjct: 122 VTRIPEE-----------------GIVVLASGPLTSGLLAEEIGRLAGSYLYFYDAIAPI 164 Query: 182 LFNSFMKFD--FDTGRLKTGTPARLDGKTII---WDKTEKQ------FADERLIPFSFMT 230 + + +D F R G DG + D+ + Q A E++ P SF Sbjct: 165 VAADSIDYDKAFRASRYGKG-----DGDDYLNCPMDEEQYQAFVREIVAAEKVEPKSF-- 217 Query: 231 DKITNRQ----IECGITRTNLETHRIIMENIKHSAIYSGDIKSYG---PRYCPSIE-DKI 282 +K+ + + IE +R ET R G +K G PR +E + Sbjct: 218 EKVVHFEGCMPIEEMASR-GPETLRF------------GPMKPVGLVDPRV--GVEPHAV 262 Query: 283 VRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIE 342 ++ + N G T + +P Q + R IPGLE +R G Sbjct: 263 IQLRQENREATMYNLVGFQTKLTWPE----------QKRIFRMIPGLENAQFLRLGSMHR 312 Query: 343 YDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICF 401 +IN P+ L T + K +F AGQI G GY E+A+ G VAG+N+AR + + + Sbjct: 313 NTFINAPELLMATCQLKSDQRIFFAGQITGVEGYVESASSGFVAGVNAARLAQG-EGLVV 371 Query: 402 SRTDSYIGVMIDDLTS--KGVLEP----YRMFTS 429 ++ IG + +T+ G +P Y +F S Sbjct: 372 PPAETAIGALARHITNTEAGHFQPMNVNYGLFPS 405 >gi|229552208|ref|ZP_04440933.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gid [Lactobacillus rhamnosus LMS2-1] gi|258539621|ref|YP_003174120.1| tRNA (uracil-5-)-methyltransferase Gid [Lactobacillus rhamnosus Lc 705] gi|229314430|gb|EEN80403.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gid [Lactobacillus rhamnosus LMS2-1] gi|257151297|emb|CAR90269.1| Glucose inhibited division protein A [Lactobacillus rhamnosus Lc 705] Length = 440 Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 54/175 (30%), Positives = 86/175 (49%), Gaps = 17/175 (9%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE I+R G ++ +P L PT +K+ + LF AG Sbjct: 278 GFQTHLKWGEQKRVFRMIPGLEHAQIVRYGVMHRNTFMKSPVVLEPTYASKRRADLFFAG 337 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 Q+ G GY E+AA GL+AG N+AR + I F +T T+ G + Y Sbjct: 338 QMTGVEGYVESAASGLIAGTNAARLALGQTPIAFPQT-----------TAMGAMAHYITH 386 Query: 428 TSRAEYRISLRPDNAD-NRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 TS + + +P NA+ + P+ +K+ ER Q+ + + + ++ L+S+ Sbjct: 387 TSPSHF----QPMNANFGIMPPLAIKVRNKKERNQQLAERALNDLATFQTELQSV 437 >gi|157692292|ref|YP_001486754.1| tRNA (uracil-5-)-methyltransferase Gid [Bacillus pumilus SAFR-032] gi|166989558|sp|A8FD77|TRMFO_BACP2 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|157681050|gb|ABV62194.1| glucose-inhibited division protein A [Bacillus pumilus SAFR-032] Length = 434 Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 56/162 (34%), Positives = 78/162 (48%), Gaps = 19/162 (11%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE+ I+R G +IN P L PT + K LF AG Sbjct: 278 GFQTHLKWGDQKEVFRLIPGLEEAEIVRYGVMHRNTFINSPSLLKPTYQFKNREDLFFAG 337 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 Q+ G GY E+AA GLVAGIN+AR + + ++ IG M +TS Sbjct: 338 QMTGVEGYVESAASGLVAGINAARFVKGEELVTLPE-ETAIGSMAYYITSTN-------- 388 Query: 428 TSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQ 469 + S +P NA+ L LG + +Q+R+A+Y + Sbjct: 389 ------KKSFQPMNANFGLL---KDLGVRIKNKQERYAEYAK 421 >gi|194015077|ref|ZP_03053694.1| tRNA:M(5)U-54 methyltransferase [Bacillus pumilus ATCC 7061] gi|194014103|gb|EDW23668.1| tRNA:M(5)U-54 methyltransferase [Bacillus pumilus ATCC 7061] Length = 434 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 56/162 (34%), Positives = 78/162 (48%), Gaps = 19/162 (11%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE+ I+R G +IN P L PT + K LF AG Sbjct: 278 GFQTHLKWGDQKEVFRLIPGLEEAEIVRYGVMHRNTFINSPSLLKPTYQFKNREDLFFAG 337 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 Q+ G GY E+AA GLVAGIN+AR + + ++ IG M +TS Sbjct: 338 QMTGVEGYVESAASGLVAGINAARFVKGEELVTLPE-ETAIGSMAYYITSTN-------- 388 Query: 428 TSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQ 469 + S +P NA+ L LG + +Q+R+A+Y + Sbjct: 389 ------KKSFQPMNANFGLL---KDLGVRIKNKQERYAEYAK 421 >gi|255659256|ref|ZP_05404665.1| tRNA:M(5)U-54 methyltransferase [Mitsuokella multacida DSM 20544] gi|260848711|gb|EEX68718.1| tRNA:M(5)U-54 methyltransferase [Mitsuokella multacida DSM 20544] Length = 445 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 98/407 (24%), Positives = 156/407 (38%), Gaps = 70/407 (17%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGLG---- 54 VI++G G AG EAA AAK GA L HKT+ + C+ ++ G G Sbjct: 4 VIIVGAGLAGSEAAWQAAKQGAEVTLYEMRPAKSTPAHKTAGFAELVCSNSLRGAGLENA 63 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L E+ L ++ ADA + PA G DR + + ++ Sbjct: 64 VGVLKEEMRRLGSIIMEAADATRV----------PA--GGALAVDRHGFSDYVTAKVTEH 111 Query: 115 ENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRM 174 N+ V+ EV I M+++++ ++ LT G+ + A R Sbjct: 112 PNITVVHEEV----------PKIPMEEDAVTIVASGPLTAGSLAEDI---------AART 152 Query: 175 GD---------SPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP 225 G+ +P SL + M + R G A ++ + + + F + + Sbjct: 153 GNDSLYFYDAAAPIVSLESVDMTKAYRASRYGKGEAAYIN--CPMTKEEYEAFWNALVTA 210 Query: 226 FSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRF 285 T + G + R I D YGP +E + Sbjct: 211 EKAPTKDFEKEKFFEGCMPVEVMASRGI------------DTLLYGPLKPVGLEHPVT-- 256 Query: 286 GERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDY 345 G R + L + + + G T L Q + IPGLE +R G + Sbjct: 257 GVRPYAVVQLRQDNASATLYNIVGFQTHLKWPEQRRVFGMIPGLEHAEFLRYGVMHRNTF 316 Query: 346 IN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSAR 391 +N P+ + PTL+ + L AGQ+ G GY E+A+ GLVAG+N+AR Sbjct: 317 LNSPRHMRPTLQLRGEDRLLFAGQMTGVEGYIESASSGLVAGVNAAR 363 >gi|207111593|ref|ZP_03245755.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Helicobacter pylori HPKX_438_CA4C1] Length = 43 Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats. Identities = 35/43 (81%), Positives = 38/43 (88%) Query: 344 DYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAG 386 D+I P EL TLETKKI GL+LAGQINGTTGYEEAAAQGL+AG Sbjct: 1 DFIQPTELTHTLETKKIKGLYLAGQINGTTGYEEAAAQGLMAG 43 >gi|169830785|ref|YP_001716767.1| tRNA (uracil-5-)-methyltransferase Gid [Candidatus Desulforudis audaxviator MP104C] gi|205830331|sp|B1I258|TRMFO_DESAP RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|169637629|gb|ACA59135.1| gid protein [Candidatus Desulforudis audaxviator MP104C] Length = 439 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 111/433 (25%), Positives = 167/433 (38%), Gaps = 67/433 (15%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGLG- 54 S VIV+G G AG EA+ + G L HKT + C+ ++ Sbjct: 2 SGGVIVVGAGLAGAEASWQLVRRGVPVVLYEMRPRKCTPAHKTGDFAELVCSNSLRAEAL 61 Query: 55 ---KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREI 111 G L E+ L L+ ADA + PA G DR+L+ A+ + Sbjct: 62 TNAVGLLKEEMRRLGSLIMACADA----------HRVPA--GGALAVDRQLFAAAVTERL 109 Query: 112 LSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTF------LRGVIHIG 165 S + V + E+ T + +I +T LT+ L G H+ Sbjct: 110 TSHRLVTVCREEITTIPTAELVI------------LATGPLTSDALADELRRLTGQEHLY 157 Query: 166 KLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP 225 A P +L + F + R G PA L+ + +++ ER Sbjct: 158 FFDAVA------PIVTLESIDQDRVFRSSRYGRGDPAYLNCPM-----SREEY--ERFWE 204 Query: 226 FSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRF 285 ++ T E ETH ++ A + YGP + D R Sbjct: 205 ALVAAERATRHTFE-------RETHFEGCLPVEVIAARGRETLLYGPLKPVGLVDP--RT 255 Query: 286 GERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDY 345 GER + L + + G T L Q + IPGLE+ +R G Y Sbjct: 256 GERPYAVVQLRQDNRAGTLYNLVGFQTNLKWGEQRRVFSMIPGLEQAEFVRYGVMHRNTY 315 Query: 346 IN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 IN P L P L K GLF+AGQ++G GY E+AA GLVAG+N+AR L+ + F Sbjct: 316 INAPVLLSPNLMLKSRPGLFIAGQLSGVEGYVESAAAGLVAGLNAARLYKGLEPLVFPPE 375 Query: 405 DSYIGVMIDDLTS 417 ++ G +I+ + + Sbjct: 376 TAH-GALINYIVT 387 >gi|319649575|ref|ZP_08003731.1| glucose-inhibited division protein A [Bacillus sp. 2_A_57_CT2] gi|317398737|gb|EFV79419.1| glucose-inhibited division protein A [Bacillus sp. 2_A_57_CT2] Length = 435 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 48/110 (43%), Positives = 59/110 (53%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IR IPGLE I+R G +IN PK L T + K LF AG Sbjct: 279 GFQTHLKWGPQKEVIRLIPGLENAEIVRYGVMHRNTFINSPKVLRATYQFKNRDDLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+AA GLVAGIN+AR D I F ++ IG M +T+ Sbjct: 339 QMTGVEGYVESAASGLVAGINAARLVKGEDPIEFPH-ETAIGSMARYITT 387 >gi|227553451|ref|ZP_03983500.1| possible tRNA (uracil-5-)-methyltransferase Gid [Enterococcus faecalis HH22] gi|227177427|gb|EEI58399.1| possible tRNA (uracil-5-)-methyltransferase Gid [Enterococcus faecalis HH22] Length = 242 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 43/104 (41%), Positives = 58/104 (55%), Gaps = 2/104 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF-PTLETKKISGLFLAG 367 G T L Q + R IPGLE +R G ++N EL PT ++KK LF AG Sbjct: 85 GFQTHLKWGEQKRVFRMIPGLENAEFVRYGVMHRNSFMNSPELLKPTYQSKKRDDLFFAG 144 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 Q+ G GY E+AA GL+AGIN+AR + + I F R ++ +G M Sbjct: 145 QMTGVEGYVESAASGLLAGINAARLAKGEEPIEFPR-ETTLGSM 187 >gi|312621561|ref|YP_004023174.1| gid protein [Caldicellulosiruptor kronotskyensis 2002] gi|312202028|gb|ADQ45355.1| gid protein [Caldicellulosiruptor kronotskyensis 2002] Length = 436 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 116/505 (22%), Positives = 185/505 (36%), Gaps = 110/505 (21%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGL---- 53 +++VIG G AG EAA V K G L HK + C+ ++ Sbjct: 2 EIVVIGAGLAGVEAANVITKFGIKVKLFEMKPKKFSPAHKIDNFAELVCSNSLKSKLLTN 61 Query: 54 GKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILS 113 G L E+ L+ A+A ++ G DR + + + I Sbjct: 62 ASGLLKEEMKVFGSLVMEAAEATSVE------------AGQALAVDRYKFSEYITQRIKQ 109 Query: 114 QENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGR 173 + VI EV +K ++ ST LTT + L + Sbjct: 110 NGLISVIHEEVTEVPRDKVVV------------VSTGPLTTESLLSDI------------ 145 Query: 174 MGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI 233 + L NS + FD P L K D F+ +K Sbjct: 146 ------SKLCNSKNLYFFDAA-----APIVL-----------KDSIDFSKAFFASRYNKG 183 Query: 234 TNRQIECGITRTNLE--------THRIIMENIKHSAIYSG------------DIKSYGPR 273 +N I C +T+ E I +++ + ++ G D YGP Sbjct: 184 SNDYINCPMTKEEYERFYWELVNAEVIEVKDFEKDLLFEGCMPIEEMARRGIDTMRYGPL 243 Query: 274 YCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVN 333 I D R G+ + L + + + G T L Q + R IPGLE Sbjct: 244 KPVGIIDP--RTGKMPYAVVQLRKDTQDGKLYNMVGFQTRLKWGEQKRVFRLIPGLENAE 301 Query: 334 IIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARK 392 +R G + YIN P+ L L KK +F AGQI G GY E+A+ G++AGIN+AR+ Sbjct: 302 FVRYGVMHKNSYINSPEVLTKYLFLKKYPNIFFAGQITGVEGYLESASTGIIAGINAARQ 361 Query: 393 SNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMK 452 + I ++ IG +I+ +T+ P + F +P NA+ + I + Sbjct: 362 ILGKEPISLP-PNTCIGALIEYITT-----PKKDF----------QPMNANYGIISIDDE 405 Query: 453 LGCIGERRQKRFAKYIQEYNFLRSL 477 + I ++ +++ + N R L Sbjct: 406 ISKIKDKEKRKLLIAQKSLNICREL 430 >gi|260892474|ref|YP_003238571.1| gid protein [Ammonifex degensii KC4] gi|260864615|gb|ACX51721.1| gid protein [Ammonifex degensii KC4] Length = 437 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 45/110 (40%), Positives = 60/110 (54%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE+ +R G ++N P L PTL KK GLF AG Sbjct: 277 GFQTNLKWSEQKRVFRLIPGLERAEFVRYGVMHRNTFLNAPILLEPTLLCKKKPGLFFAG 336 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 QI G GY E+AA GLVAGIN+AR + F ++ G +++ +T+ Sbjct: 337 QITGVEGYVESAAAGLVAGINAARLVRGEKPLVFPPETAH-GALLNYITT 385 >gi|258514509|ref|YP_003190731.1| gid protein [Desulfotomaculum acetoxidans DSM 771] gi|257778214|gb|ACV62108.1| gid protein [Desulfotomaculum acetoxidans DSM 771] Length = 439 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 43/112 (38%), Positives = 62/112 (55%), Gaps = 2/112 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L + Q + IPGLE+ + +R G YIN P L PTLE K LF AG Sbjct: 280 GFQTHLKWDEQRRVFSMIPGLEQADFVRMGVMHRNTYINSPALLLPTLECKIRPQLFFAG 339 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 Q+ G GY E+AA GL+AGIN++R + + + F ++ G + + +T+ G Sbjct: 340 QMTGVEGYVESAAAGLLAGINASRLACEKAPLVFPAETAH-GSLFNYITAAG 390 >gi|297617130|ref|YP_003702289.1| gid protein [Syntrophothermus lipocalidus DSM 12680] gi|297144967|gb|ADI01724.1| gid protein [Syntrophothermus lipocalidus DSM 12680] Length = 439 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 44/110 (40%), Positives = 59/110 (53%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L + Q + R IPGLEK +R G YIN P+ L PTL G+F AG Sbjct: 280 GFQTRLRFKEQERVFRLIPGLEKAEFVRYGVMHRNTYINSPRLLEPTLAFTPKDGVFFAG 339 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 QI G GY E+AA G++AG+N+ R + + RT + IG + +TS Sbjct: 340 QITGCEGYMESAATGILAGLNAVRLAAGKPLLVLPRT-TMIGALCHHITS 388 >gi|327535214|gb|AEA94048.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecalis OG1RF] Length = 435 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 51/143 (35%), Positives = 72/143 (50%), Gaps = 4/143 (2%) Query: 270 YGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGL 329 +GP +ED + G+R I L + + G T L Q + R IPGL Sbjct: 241 FGPMKPVGLEDP--KTGKRPYAVIQLRQDNAAASLYNIVGFQTHLKWGEQKRVFRMIPGL 298 Query: 330 EKVNIIRPGYAIEYDYINPKELF-PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGIN 388 E +R G ++N EL PT ++KK LF AGQ+ G GY E+AA GL+AGIN Sbjct: 299 ENAEFVRYGVMHRNSFMNSPELLKPTYQSKKRDDLFFAGQMTGVEGYVESAASGLLAGIN 358 Query: 389 SARKSNKLDCICFSRTDSYIGVM 411 +AR + + I F R ++ +G M Sbjct: 359 AARLAKGEEPIEFPR-ETTLGSM 380 >gi|315172223|gb|EFU16240.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecalis TX1346] Length = 435 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 51/143 (35%), Positives = 72/143 (50%), Gaps = 4/143 (2%) Query: 270 YGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGL 329 +GP +ED + G+R I L + + G T L Q + R IPGL Sbjct: 241 FGPMKPVGLEDP--KTGKRPYAVIQLRQDNAAASLYNIVGFQTHLKWGEQKRVFRMIPGL 298 Query: 330 EKVNIIRPGYAIEYDYINPKELF-PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGIN 388 E +R G ++N EL PT ++KK LF AGQ+ G GY E+AA GL+AGIN Sbjct: 299 ENAEFVRYGVMHRNSFMNSPELLKPTYQSKKRDDLFFAGQMTGVEGYVESAASGLLAGIN 358 Query: 389 SARKSNKLDCICFSRTDSYIGVM 411 +AR + + I F R ++ +G M Sbjct: 359 AARLAKGEEPIEFPR-ETTLGSM 380 >gi|315145128|gb|EFT89144.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecalis TX2141] gi|315160538|gb|EFU04555.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecalis TX0645] gi|323480810|gb|ADX80249.1| tRNA:m(5)U-54 methyltransferase [Enterococcus faecalis 62] Length = 435 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 51/143 (35%), Positives = 72/143 (50%), Gaps = 4/143 (2%) Query: 270 YGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGL 329 +GP +ED + G+R I L + + G T L Q + R IPGL Sbjct: 241 FGPMKPVGLEDP--KTGKRPYAVIQLRQDNAAASLYNIVGFQTHLKWGEQKRVFRMIPGL 298 Query: 330 EKVNIIRPGYAIEYDYINPKELF-PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGIN 388 E +R G ++N EL PT ++KK LF AGQ+ G GY E+AA GL+AGIN Sbjct: 299 ENAEFVRYGVMHRNSFMNSPELLKPTYQSKKRDDLFFAGQMTGVEGYVESAASGLLAGIN 358 Query: 389 SARKSNKLDCICFSRTDSYIGVM 411 +AR + + I F R ++ +G M Sbjct: 359 AARLAKGEEPIEFPR-ETTLGSM 380 >gi|227551194|ref|ZP_03981243.1| tRNA (uracil-5-)-methyltransferase [Enterococcus faecium TX1330] gi|227179662|gb|EEI60634.1| tRNA (uracil-5-)-methyltransferase [Enterococcus faecium TX1330] Length = 462 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 49/143 (34%), Positives = 73/143 (51%), Gaps = 4/143 (2%) Query: 270 YGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGL 329 +GP +ED + G+R I L + + G T L Q + R IPGL Sbjct: 257 FGPMKPVGLEDP--KTGKRPYAVIQLRQDNAAASLYNIVGFQTHLKWGEQKRVFRMIPGL 314 Query: 330 EKVNIIRPGYAIEYDYINPKELF-PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGIN 388 E +R G ++N EL PT ++ K LF AGQ+ G GY E+AA GL+AGIN Sbjct: 315 ENAEFVRYGVMHRNSFMNSPELLKPTYQSTKREDLFFAGQMTGVEGYVESAASGLLAGIN 374 Query: 389 SARKSNKLDCICFSRTDSYIGVM 411 +AR + +++ + F + ++ IG M Sbjct: 375 AARLAKEMEPVEFPQ-ETAIGSM 396 >gi|29376203|ref|NP_815357.1| tRNA (uracil-5-)-methyltransferase Gid [Enterococcus faecalis V583] gi|227518834|ref|ZP_03948883.1| tRNA (uracil-5-)-methyltransferase Gid [Enterococcus faecalis TX0104] gi|229545741|ref|ZP_04434466.1| tRNA (uracil-5-)-methyltransferase Gid [Enterococcus faecalis TX1322] gi|229549930|ref|ZP_04438655.1| tRNA (uracil-5-)-methyltransferase Gid [Enterococcus faecalis ATCC 29200] gi|255972713|ref|ZP_05423299.1| tRNA(uracil-5-)-methyl transferase Gid [Enterococcus faecalis T1] gi|255975765|ref|ZP_05426351.1| tRNA(uracil-5-)-methyl transferase Gid [Enterococcus faecalis T2] gi|256619144|ref|ZP_05475990.1| glucose inhibited division protein A [Enterococcus faecalis ATCC 4200] gi|256762580|ref|ZP_05503160.1| tRNA(uracil-5-)-methyl transferase Gid [Enterococcus faecalis T3] gi|256853206|ref|ZP_05558576.1| tRNA (uracil-5-)-methyltransferase Gid [Enterococcus faecalis T8] gi|256959060|ref|ZP_05563231.1| glucose inhibited division protein A [Enterococcus faecalis DS5] gi|256961847|ref|ZP_05566018.1| gid protein [Enterococcus faecalis Merz96] gi|256965044|ref|ZP_05569215.1| gid protein [Enterococcus faecalis HIP11704] gi|257079091|ref|ZP_05573452.1| gid protein [Enterococcus faecalis JH1] gi|257085102|ref|ZP_05579463.1| tRNA (uracil-5-)-methyltransferase Gid [Enterococcus faecalis Fly1] gi|257086663|ref|ZP_05581024.1| gid protein [Enterococcus faecalis D6] gi|257089965|ref|ZP_05584326.1| tRNA (uracil-5-)-methyltransferase gid [Enterococcus faecalis CH188] gi|257416174|ref|ZP_05593168.1| glucose inhibited division protein A [Enterococcus faecalis AR01/DG] gi|257419376|ref|ZP_05596370.1| tRNA (uracil-5-)-methyltransferase [Enterococcus faecalis T11] gi|257422530|ref|ZP_05599520.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Enterococcus faecalis X98] gi|293382912|ref|ZP_06628830.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecalis R712] gi|293389599|ref|ZP_06634056.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecalis S613] gi|294781638|ref|ZP_06746974.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecalis PC1.1] gi|300860563|ref|ZP_07106650.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecalis TUSoD Ef11] gi|307270937|ref|ZP_07552220.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecalis TX4248] gi|307273142|ref|ZP_07554388.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecalis TX0855] gi|307274877|ref|ZP_07556040.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecalis TX2134] gi|307277984|ref|ZP_07559068.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecalis TX0860] gi|307289188|ref|ZP_07569144.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecalis TX0109] gi|307291915|ref|ZP_07571784.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecalis TX0411] gi|312899496|ref|ZP_07758826.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecalis TX0470] gi|312903389|ref|ZP_07762569.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecalis TX0635] gi|312907618|ref|ZP_07766609.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecalis DAPTO 512] gi|312910235|ref|ZP_07769082.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecalis DAPTO 516] gi|312951579|ref|ZP_07770475.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecalis TX0102] gi|33301126|sp|Q834K1|TRMFO_ENTFA RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|29343666|gb|AAO81427.1| glucose-inhibited division protein [Enterococcus faecalis V583] gi|227073747|gb|EEI11710.1| tRNA (uracil-5-)-methyltransferase Gid [Enterococcus faecalis TX0104] gi|229304943|gb|EEN70939.1| tRNA (uracil-5-)-methyltransferase Gid [Enterococcus faecalis ATCC 29200] gi|229309191|gb|EEN75178.1| tRNA (uracil-5-)-methyltransferase Gid [Enterococcus faecalis TX1322] gi|255963731|gb|EET96207.1| tRNA(uracil-5-)-methyl transferase Gid [Enterococcus faecalis T1] gi|255968637|gb|EET99259.1| tRNA(uracil-5-)-methyl transferase Gid [Enterococcus faecalis T2] gi|256598671|gb|EEU17847.1| glucose inhibited division protein A [Enterococcus faecalis ATCC 4200] gi|256683831|gb|EEU23526.1| tRNA(uracil-5-)-methyl transferase Gid [Enterococcus faecalis T3] gi|256711665|gb|EEU26703.1| tRNA (uracil-5-)-methyltransferase Gid [Enterococcus faecalis T8] gi|256949556|gb|EEU66188.1| glucose inhibited division protein A [Enterococcus faecalis DS5] gi|256952343|gb|EEU68975.1| gid protein [Enterococcus faecalis Merz96] gi|256955540|gb|EEU72172.1| gid protein [Enterococcus faecalis HIP11704] gi|256987121|gb|EEU74423.1| gid protein [Enterococcus faecalis JH1] gi|256993132|gb|EEU80434.1| tRNA (uracil-5-)-methyltransferase Gid [Enterococcus faecalis Fly1] gi|256994693|gb|EEU81995.1| gid protein [Enterococcus faecalis D6] gi|256998777|gb|EEU85297.1| tRNA (uracil-5-)-methyltransferase gid [Enterococcus faecalis CH188] gi|257158002|gb|EEU87962.1| glucose inhibited division protein A [Enterococcus faecalis ARO1/DG] gi|257161204|gb|EEU91164.1| tRNA (uracil-5-)-methyltransferase [Enterococcus faecalis T11] gi|257164354|gb|EEU94314.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Enterococcus faecalis X98] gi|291079577|gb|EFE16941.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecalis R712] gi|291081216|gb|EFE18179.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecalis S613] gi|294451334|gb|EFG19800.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecalis PC1.1] gi|300849602|gb|EFK77352.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecalis TUSoD Ef11] gi|306496913|gb|EFM66461.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecalis TX0411] gi|306499897|gb|EFM69258.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecalis TX0109] gi|306505381|gb|EFM74567.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecalis TX0860] gi|306508325|gb|EFM77432.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecalis TX2134] gi|306510127|gb|EFM79151.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecalis TX0855] gi|306512435|gb|EFM81084.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecalis TX4248] gi|310626646|gb|EFQ09929.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecalis DAPTO 512] gi|310630545|gb|EFQ13828.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecalis TX0102] gi|310633265|gb|EFQ16548.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecalis TX0635] gi|311289508|gb|EFQ68064.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecalis DAPTO 516] gi|311293366|gb|EFQ71922.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecalis TX0470] gi|315027185|gb|EFT39117.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecalis TX2137] gi|315029302|gb|EFT41234.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecalis TX4000] gi|315034052|gb|EFT45984.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecalis TX0017] gi|315147345|gb|EFT91361.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecalis TX4244] gi|315150455|gb|EFT94471.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecalis TX0012] gi|315152399|gb|EFT96415.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecalis TX0031] gi|315155671|gb|EFT99687.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecalis TX0043] gi|315158158|gb|EFU02175.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecalis TX0312] gi|315164097|gb|EFU08114.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecalis TX1302] gi|315168953|gb|EFU12970.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecalis TX1341] gi|315169813|gb|EFU13830.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecalis TX1342] gi|315575783|gb|EFU87974.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecalis TX0309B] gi|315577625|gb|EFU89816.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecalis TX0630] gi|315580435|gb|EFU92626.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecalis TX0309A] gi|329571615|gb|EGG53296.1| tRNA:m(5)U-54 methyltransferase [Enterococcus faecalis TX1467] Length = 435 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 51/143 (35%), Positives = 72/143 (50%), Gaps = 4/143 (2%) Query: 270 YGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGL 329 +GP +ED + G+R I L + + G T L Q + R IPGL Sbjct: 241 FGPMKPVGLEDP--KTGKRPYAVIQLRQDNAAASLYNIVGFQTHLKWGEQKRVFRMIPGL 298 Query: 330 EKVNIIRPGYAIEYDYINPKELF-PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGIN 388 E +R G ++N EL PT ++KK LF AGQ+ G GY E+AA GL+AGIN Sbjct: 299 ENAEFVRYGVMHRNSFMNSPELLKPTYQSKKRDDLFFAGQMTGVEGYVESAASGLLAGIN 358 Query: 389 SARKSNKLDCICFSRTDSYIGVM 411 +AR + + I F R ++ +G M Sbjct: 359 AARLAKGEEPIEFPR-ETTLGSM 380 >gi|258590887|emb|CBE67182.1| conserved hypothetical protein; putative glucose-inhibited division protein (gid) [NC10 bacterium 'Dutch sediment'] Length = 443 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 112/425 (26%), Positives = 176/425 (41%), Gaps = 94/425 (22%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGLG--- 54 +++V+GGG AG EAA AA+ GA L H+T + + C+ ++ Sbjct: 3 EIVVVGGGLAGSEAAWQAAERGAHVRLYEMRPAYPTPAHRTDRLAELVCSNSLKSDSPDD 62 Query: 55 -KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILS 113 G L RE+ A ++ A A + PA G DR+ + + + Sbjct: 63 CHGLLKRELTAYGSVIMTAARAHAV----------PA--GSALAVDRDAFAAEVTARLAH 110 Query: 114 QENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGR 173 + +++ EV E+ +I +T LT+ L G + + PA Sbjct: 111 HPRITIVRDEVKAIPEERPVI------------IATGPLTS-ERLAGALRDRFVNYPA-- 155 Query: 174 MGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI 233 S +S+ + + +D + G TI D+T FA R DK Sbjct: 156 ---SVDSSVDTQDLLYFYD------AISPIIAGDTI--DRT-VTFAASRY-------DKG 196 Query: 234 TNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYG-PRY---CPSIE------DKIV 283 + + C +TR E +R+ ++I+ + + I S+ RY C IE + + Sbjct: 197 GDDYLNCPMTR---EEYRLFWQSIRTAEL--APIHSFEEARYFEGCLPIEVLAARGEDAL 251 Query: 284 RFGE---------RNGH------QIFLEP-EGLNTDVVYPNGISTALPEEIQHQFIRTIP 327 RFG R G Q+ LE EG ++V G T L QH+ +RTIP Sbjct: 252 RFGPMKPVGLIDPRTGRRPCAVVQLRLENREGTMYNIV---GFQTRLKWGEQHRILRTIP 308 Query: 328 GLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAG 386 GL +R G +IN P L T++ K G+ LAGQ+ G GY E+A GL+AG Sbjct: 309 GLGGAEFLRYGSIHRNTFINAPTLLRETMQLKGDPGILLAGQLTGVEGYLESAGSGLLAG 368 Query: 387 INSAR 391 IN+ + Sbjct: 369 INAVK 373 >gi|52080215|ref|YP_079006.1| tRNA (uracil-5-)-methyltransferase Gid [Bacillus licheniformis ATCC 14580] gi|52785592|ref|YP_091421.1| tRNA (uracil-5-)-methyltransferase Gid [Bacillus licheniformis ATCC 14580] gi|319646006|ref|ZP_08000236.1| methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase trmFO [Bacillus sp. BT1B_CT2] gi|81170594|sp|Q65JN6|TRMFO_BACLD RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|52003426|gb|AAU23368.1| glucose-inhibited division protein [Bacillus licheniformis ATCC 14580] gi|52348094|gb|AAU40728.1| Gid [Bacillus licheniformis ATCC 14580] gi|317391756|gb|EFV72553.1| methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase trmFO [Bacillus sp. BT1B_CT2] Length = 434 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 46/109 (42%), Positives = 60/109 (55%), Gaps = 2/109 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + +R IPGLE+ I+R G +IN P L T + KK LF AG Sbjct: 278 GFQTHLKWGDQKEVLRLIPGLEQAEIVRYGVMHRNTFINSPSLLKATYQFKKRDDLFFAG 337 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 Q+ G GY E+AA GLVAGIN+AR + + FS ++ IG M +T Sbjct: 338 QMTGVEGYVESAASGLVAGINAARLIQGKEPVTFS-NETAIGSMAHYIT 385 >gi|315037060|gb|EFT48992.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecalis TX0027] Length = 338 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 43/104 (41%), Positives = 58/104 (55%), Gaps = 2/104 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF-PTLETKKISGLFLAG 367 G T L Q + R IPGLE +R G ++N EL PT ++KK LF AG Sbjct: 181 GFQTHLKWGEQKRVFRMIPGLENAEFVRYGVMHRNSFMNSPELLKPTYQSKKRDDLFFAG 240 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 Q+ G GY E+AA GL+AGIN+AR + + I F R ++ +G M Sbjct: 241 QMTGVEGYVESAASGLLAGINAARLAKGEEPIEFPR-ETTLGSM 283 >gi|258616487|ref|ZP_05714257.1| tRNA (uracil-5-)-methyltransferase Gid [Enterococcus faecium DO] gi|314938035|ref|ZP_07845345.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecium TX0133a04] gi|314941979|ref|ZP_07848840.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecium TX0133C] gi|314948768|ref|ZP_07852140.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecium TX0082] gi|314951786|ref|ZP_07854825.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecium TX0133A] gi|314991807|ref|ZP_07857265.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecium TX0133B] gi|314995848|ref|ZP_07860935.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecium TX0133a01] gi|313589952|gb|EFR68797.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecium TX0133a01] gi|313593618|gb|EFR72463.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecium TX0133B] gi|313596065|gb|EFR74910.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecium TX0133A] gi|313599231|gb|EFR78076.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecium TX0133C] gi|313642610|gb|EFS07190.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecium TX0133a04] gi|313644834|gb|EFS09414.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecium TX0082] Length = 458 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 49/143 (34%), Positives = 73/143 (51%), Gaps = 4/143 (2%) Query: 270 YGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGL 329 +GP +ED + G+R I L + + G T L Q + R IPGL Sbjct: 257 FGPMKPVGLEDP--KTGKRPYAVIQLRQDNAAASLYNIVGFQTHLKWGEQKRVFRMIPGL 314 Query: 330 EKVNIIRPGYAIEYDYINPKELF-PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGIN 388 E +R G ++N EL PT ++ K LF AGQ+ G GY E+AA GL+AGIN Sbjct: 315 ENAEFVRYGVMHRNSFMNSPELLKPTYQSTKREDLFFAGQMTGVEGYVESAASGLLAGIN 374 Query: 389 SARKSNKLDCICFSRTDSYIGVM 411 +AR + +++ + F + ++ IG M Sbjct: 375 AARLAKEMEPVEFPQ-ETAIGSM 396 >gi|296330828|ref|ZP_06873303.1| tRNA (uracil-5-)-methyltransferase Gid [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674346|ref|YP_003866018.1| tRNA:m(5)U-54 methyltransferase [Bacillus subtilis subsp. spizizenii str. W23] gi|296151833|gb|EFG92707.1| tRNA (uracil-5-)-methyltransferase Gid [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305412590|gb|ADM37709.1| tRNA:m(5)U-54 methyltransferase [Bacillus subtilis subsp. spizizenii str. W23] Length = 435 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 45/110 (40%), Positives = 62/110 (56%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + ++ IPGLE V I+R G +IN P L PT + K S LF AG Sbjct: 279 GFQTHLKWGDQKEVLKLIPGLENVEIVRYGVMHRNTFINSPSLLKPTYQFKNRSDLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+AA GLVAGIN+A+ + + F + ++ IG M +T+ Sbjct: 339 QMTGVEGYVESAASGLVAGINAAKLVLGEELVTFPQ-ETAIGSMAHYITT 387 >gi|293377183|ref|ZP_06623391.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecium PC4.1] gi|292644203|gb|EFF62305.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecium PC4.1] Length = 445 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 49/143 (34%), Positives = 73/143 (51%), Gaps = 4/143 (2%) Query: 270 YGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGL 329 +GP +ED + G+R I L + + G T L Q + R IPGL Sbjct: 240 FGPMKPVGLEDP--KTGKRPYAVIQLRQDNAAASLYNIVGFQTHLKWGEQKRVFRMIPGL 297 Query: 330 EKVNIIRPGYAIEYDYINPKELF-PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGIN 388 E +R G ++N EL PT ++ K LF AGQ+ G GY E+AA GL+AGIN Sbjct: 298 ENAEFVRYGVMHRNSFMNSPELLKPTYQSTKREDLFFAGQMTGVEGYVESAASGLLAGIN 357 Query: 389 SARKSNKLDCICFSRTDSYIGVM 411 +AR + +++ + F + ++ IG M Sbjct: 358 AARLAKEMEPVEFPQ-ETAIGSM 379 >gi|257887689|ref|ZP_05667342.1| glucose inhibited division protein A [Enterococcus faecium 1,141,733] gi|257896183|ref|ZP_05675836.1| glucose inhibited division protein A [Enterococcus faecium Com12] gi|257823743|gb|EEV50675.1| glucose inhibited division protein A [Enterococcus faecium 1,141,733] gi|257832748|gb|EEV59169.1| glucose inhibited division protein A [Enterococcus faecium Com12] Length = 443 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 41/104 (39%), Positives = 59/104 (56%), Gaps = 2/104 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF-PTLETKKISGLFLAG 367 G T L Q + R IPGLE +R G ++N EL PT ++ K LF AG Sbjct: 275 GFQTHLKWGEQKRVFRMIPGLENAEFVRYGVMHRNSFMNSPELLKPTYQSTKREDLFFAG 334 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 Q+ G GY E+AA GL+AGIN+AR + +++ + F + ++ IG M Sbjct: 335 QMTGVEGYVESAASGLLAGINAARLAKEMEPVEFPQ-ETAIGSM 377 >gi|253700155|ref|YP_003021344.1| tRNA (uracil-5-)-methyltransferase Gid [Geobacter sp. M21] gi|259547954|sp|C6E557|TRMFO_GEOSM RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|251775005|gb|ACT17586.1| gid protein [Geobacter sp. M21] Length = 435 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 105/427 (24%), Positives = 168/427 (39%), Gaps = 59/427 (13%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALD 66 + VIGGG AGCEAA AAK G L K + P + L + +R D+L+ Sbjct: 4 QITVIGGGLAGCEAAWQAAKRGVKVRLFEMKPNCYSEAHHLPGLSELVCSNSLRG-DSLE 62 Query: 67 GLMGRVADAAGIQFRVLNVKKGPAVRGPRTQA---DRELYRLAMQREILSQENLDVIQGE 123 +G + + + L ++ A + P A DR+L+ + I S ++V++ E Sbjct: 63 NAVGLLKEELR-RLESLFMEGAEATKVPAGGALAVDRDLFSQYITSRIESHPLIEVVREE 121 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVI--HIGKLKIPAGRMGDSPSNS 181 V E VVL +G G++ IG+L Sbjct: 122 VTRIPEE-----------------GIVVLASGPLTAGLLAQEIGRLA------------- 151 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 S++ F +D + GK + K D+ ++ + Q + Sbjct: 152 --GSYLYF-YDAIAPIVAADSIDYGKAFRASRYGKGDGDD------YVNCPMDEEQYQA- 201 Query: 242 ITRTNLETHRIIMENIKHSAIYSG-----DIKSYGP---RYCPSIEDKIV--RFGERNGH 291 R L ++ ++ + + G ++ S GP R+ P +V R G Sbjct: 202 FVREILAAEKVEPKSFEKVVHFEGCMPIEEMASRGPETLRFGPMKPVGLVDPRVGVEPHA 261 Query: 292 QIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKE 350 I L E L + G T L Q + R IPGLE +R G +IN P+ Sbjct: 262 VIQLRQENLEATMYNLVGFQTKLTWPEQKRIFRMIPGLENAQFLRLGSMHRNTFINAPEL 321 Query: 351 LFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGV 410 L T + K +F AGQI G GY E+A+ G G+N+AR S K + + ++ IG Sbjct: 322 LMATCQLKSDQRIFFAGQITGVEGYVESASSGFAVGVNAARLS-KGEGLVVPPAETAIGA 380 Query: 411 MIDDLTS 417 + +T+ Sbjct: 381 LARHITN 387 >gi|311030139|ref|ZP_07708229.1| tRNA (uracil-5-)-methyltransferase Gid [Bacillus sp. m3-13] Length = 434 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 45/110 (40%), Positives = 61/110 (55%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IR IPGLE I+R G +IN P L PT + K+ LF AG Sbjct: 279 GFQTHLKWGPQKEVIRLIPGLENAEIVRYGVMHRNTFINSPNLLKPTYQFKEREDLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+AA GL+AG+N+AR + + F + ++ IG M +TS Sbjct: 339 QMTGVEGYVESAASGLIAGMNAARLVLGEEPLVFPK-ETAIGSMAHYITS 387 >gi|94987290|ref|YP_595223.1| tRNA (uracil-5-)-methyltransferase Gid [Lawsonia intracellularis PHE/MN1-00] gi|205830361|sp|Q1MQ25|TRMFO_LAWIP RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|94731539|emb|CAJ54902.1| NAD/FAD-utilizing enzyme apparently involved in cell division [Lawsonia intracellularis PHE/MN1-00] Length = 445 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 101/412 (24%), Positives = 157/412 (38%), Gaps = 80/412 (19%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGG---- 52 +++ +IGGG +GCE A AK G S L H T + + C+ ++ Sbjct: 4 HNIAIIGGGLSGCECALTLAKFGFSVTLFEQKPQLFSPAHNTPLLAELVCSNSLRSNELT 63 Query: 53 LGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREIL 112 G G L +E+ L+ + +AD + PA G DREL+ + + I Sbjct: 64 TGIGLLKQELRELNSPLMAIADTCRV----------PA--GKALAVDRELFSKQVTQLIE 111 Query: 113 SQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAG 172 S + +I+ EV+ +T S + D R ++ G L P Sbjct: 112 SHPKIHLIREEVSSLST-----SFLEKYD-----------------RIIVATGPLASP-- 147 Query: 173 RMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIW-DKTEKQFADERL-IPFSFMT 230 + +S S + + ++ F + T +D W + E+Q + L P S+ Sbjct: 148 NISNSLSTLIGDKYLYFYDAIAPIVTAD--SIDMSIAFWGSRYEEQGEGDYLNCPMSYEE 205 Query: 231 -----------DKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYG---PRYCP 276 +K+TN ++E I + E + + ++ G K G P Sbjct: 206 YQIFYSSLLKGEKVTNSKVEKEIHFEGCMPIEALAERGEKTLLF-GPFKPVGLINPHT-- 262 Query: 277 SIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIR 336 G R + L PE LN ++ G T L Q R +PGL V +R Sbjct: 263 ---------GLRPYAVLQLRPENLNKSMLNLVGCQTKLTYPAQDTIFRLVPGLSNVEFVR 313 Query: 337 PGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGI 387 G YIN PK L L + + LAGQI G GY E+ A GL I Sbjct: 314 FGSMHRNTYINSPKILTDQLALRNFPCIHLAGQITGVEGYVESIACGLWVSI 365 >gi|257884854|ref|ZP_05664507.1| glucose inhibited division protein A [Enterococcus faecium 1,231,501] gi|257820692|gb|EEV47840.1| glucose inhibited division protein A [Enterococcus faecium 1,231,501] Length = 439 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 49/143 (34%), Positives = 73/143 (51%), Gaps = 4/143 (2%) Query: 270 YGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGL 329 +GP +ED + G+R I L + + G T L Q + R IPGL Sbjct: 238 FGPMKPVGLEDP--KTGKRPYAVIQLRQDNAAASLYNIVGFQTHLKWGEQKRVFRMIPGL 295 Query: 330 EKVNIIRPGYAIEYDYINPKELF-PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGIN 388 E +R G ++N EL PT ++ K LF AGQ+ G GY E+AA GL+AGIN Sbjct: 296 ENAEFVRYGVMHRNSFMNSPELLKPTYQSTKREDLFFAGQMTGVEGYVESAASGLLAGIN 355 Query: 389 SARKSNKLDCICFSRTDSYIGVM 411 +AR + +++ + F + ++ IG M Sbjct: 356 AARLAKEMEPVEFPQ-ETAIGSM 377 >gi|69246760|ref|ZP_00604108.1| Gid protein [Enterococcus faecium DO] gi|257878023|ref|ZP_05657676.1| glucose inhibited division protein A [Enterococcus faecium 1,230,933] gi|257881191|ref|ZP_05660844.1| glucose inhibited division protein A [Enterococcus faecium 1,231,502] gi|257889778|ref|ZP_05669431.1| glucose inhibited division protein A [Enterococcus faecium 1,231,410] gi|260559073|ref|ZP_05831259.1| gid protein [Enterococcus faecium C68] gi|68195114|gb|EAN09574.1| Gid protein [Enterococcus faecium DO] gi|257812251|gb|EEV41009.1| glucose inhibited division protein A [Enterococcus faecium 1,230,933] gi|257816849|gb|EEV44177.1| glucose inhibited division protein A [Enterococcus faecium 1,231,502] gi|257826138|gb|EEV52764.1| glucose inhibited division protein A [Enterococcus faecium 1,231,410] gi|260074830|gb|EEW63146.1| gid protein [Enterococcus faecium C68] Length = 439 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 41/104 (39%), Positives = 59/104 (56%), Gaps = 2/104 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF-PTLETKKISGLFLAG 367 G T L Q + R IPGLE +R G ++N EL PT ++ K LF AG Sbjct: 275 GFQTHLKWGEQKRVFRMIPGLENAEFVRYGVMHRNSFMNSPELLKPTYQSTKREDLFFAG 334 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 Q+ G GY E+AA GL+AGIN+AR + +++ + F + ++ IG M Sbjct: 335 QMTGVEGYVESAASGLLAGINAARLAKEMEPVEFPQ-ETAIGSM 377 >gi|294617497|ref|ZP_06697128.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecium E1679] gi|291596237|gb|EFF27499.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecium E1679] Length = 441 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 49/143 (34%), Positives = 73/143 (51%), Gaps = 4/143 (2%) Query: 270 YGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGL 329 +GP +ED + G+R I L + + G T L Q + R IPGL Sbjct: 240 FGPMKPVGLEDP--KTGKRPYAVIQLRQDNAAASLYNIVGFQTHLKWGEQKRVFRMIPGL 297 Query: 330 EKVNIIRPGYAIEYDYINPKELF-PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGIN 388 E +R G ++N EL PT ++ K LF AGQ+ G GY E+AA GL+AGIN Sbjct: 298 ENAEFVRYGVMHRNSFMNSPELLKPTYQSTKREDLFFAGQMTGVEGYVESAASGLLAGIN 357 Query: 389 SARKSNKLDCICFSRTDSYIGVM 411 +AR + +++ + F + ++ IG M Sbjct: 358 AARLAKEMEPVEFPQ-ETAIGSM 379 >gi|261207607|ref|ZP_05922292.1| gid protein [Enterococcus faecium TC 6] gi|289565119|ref|ZP_06445572.1| tRNA:m(5)U-54 methyltransferase [Enterococcus faecium D344SRF] gi|260077990|gb|EEW65696.1| gid protein [Enterococcus faecium TC 6] gi|289163126|gb|EFD10973.1| tRNA:m(5)U-54 methyltransferase [Enterococcus faecium D344SRF] Length = 439 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 49/143 (34%), Positives = 73/143 (51%), Gaps = 4/143 (2%) Query: 270 YGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGL 329 +GP +ED + G+R I L + + G T L Q + R IPGL Sbjct: 238 FGPMKPVGLEDP--KTGKRPYAVIQLRQDNAAASLYNIVGFQTHLKWGEQKRVFRMIPGL 295 Query: 330 EKVNIIRPGYAIEYDYINPKELF-PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGIN 388 E +R G ++N EL PT ++ K LF AGQ+ G GY E+AA GL+AGIN Sbjct: 296 ENAEFVRYGVMHRNSFMNSPELLKPTYQSTKREDLFFAGQMTGVEGYVESAASGLLAGIN 355 Query: 389 SARKSNKLDCICFSRTDSYIGVM 411 +AR + +++ + F + ++ IG M Sbjct: 356 AARLAKEMEPVEFPQ-ETAIGSM 377 >gi|300767453|ref|ZP_07077365.1| tRNA:M(5)U-54 methyltransferase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300495272|gb|EFK30428.1| tRNA:M(5)U-54 methyltransferase [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 450 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 43/109 (39%), Positives = 61/109 (55%), Gaps = 2/109 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE V +R G ++ +PK L PT +T++ LF AG Sbjct: 289 GFQTHLKWGEQKRVFSLIPGLENVEFVRYGVMHRNTFMKSPKLLTPTYQTQQRPDLFFAG 348 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 Q+ G GY E+AA G+VAG N+AR + L+ + F TD+ +G M +T Sbjct: 349 QMTGVEGYIESAASGIVAGTNAARLALGLEPVVFP-TDTMMGAMAHYIT 396 >gi|321315379|ref|YP_004207666.1| tRNA (uracil-5-)-methyltransferase Gid [Bacillus subtilis BSn5] gi|320021653|gb|ADV96639.1| tRNA (uracil-5-)-methyltransferase Gid [Bacillus subtilis BSn5] Length = 435 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 45/110 (40%), Positives = 62/110 (56%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + ++ IPGLE V I+R G +IN P L PT + K S LF AG Sbjct: 279 GFQTHLKWGDQKEVLKLIPGLENVEIVRYGVMHRNTFINSPSLLKPTYQFKNRSDLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+AA GLVAGIN+A+ + + F + ++ IG M +T+ Sbjct: 339 QMTGVEGYVESAASGLVAGINAAKLVLGEELVIFPQ-ETAIGSMAHYITT 387 >gi|293556767|ref|ZP_06675330.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecium E1039] gi|291601099|gb|EFF31388.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecium E1039] Length = 441 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 41/104 (39%), Positives = 59/104 (56%), Gaps = 2/104 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF-PTLETKKISGLFLAG 367 G T L Q + R IPGLE +R G ++N EL PT ++ K LF AG Sbjct: 277 GFQTHLKWGEQKRVFRMIPGLENAEFVRYGVMHRNSFMNSPELLKPTYQSTKREDLFFAG 336 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 Q+ G GY E+AA GL+AGIN+AR + +++ + F + ++ IG M Sbjct: 337 QMTGVEGYVESAASGLLAGINAARLAKEMEPVEFPQ-ETAIGSM 379 >gi|293563425|ref|ZP_06677874.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecium E1162] gi|293568162|ref|ZP_06679498.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecium E1071] gi|294622306|ref|ZP_06701349.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecium U0317] gi|291589152|gb|EFF20964.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecium E1071] gi|291598198|gb|EFF29296.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecium U0317] gi|291604686|gb|EFF34171.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecium E1162] Length = 441 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 49/143 (34%), Positives = 73/143 (51%), Gaps = 4/143 (2%) Query: 270 YGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGL 329 +GP +ED + G+R I L + + G T L Q + R IPGL Sbjct: 240 FGPMKPVGLEDP--KTGKRPYAVIQLRQDNAAASLYNIVGFQTHLKWGEQKRVFRMIPGL 297 Query: 330 EKVNIIRPGYAIEYDYINPKELF-PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGIN 388 E +R G ++N EL PT ++ K LF AGQ+ G GY E+AA GL+AGIN Sbjct: 298 ENAEFVRYGVMHRNSFMNSPELLKPTYQSTKREDLFFAGQMTGVEGYVESAASGLLAGIN 357 Query: 389 SARKSNKLDCICFSRTDSYIGVM 411 +AR + +++ + F + ++ IG M Sbjct: 358 AARLAKEMEPVEFPQ-ETAIGSM 379 >gi|257898820|ref|ZP_05678473.1| glucose inhibited division protein A [Enterococcus faecium Com15] gi|257836732|gb|EEV61806.1| glucose inhibited division protein A [Enterococcus faecium Com15] Length = 439 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 41/104 (39%), Positives = 59/104 (56%), Gaps = 2/104 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF-PTLETKKISGLFLAG 367 G T L Q + R IPGLE +R G ++N EL PT ++ K LF AG Sbjct: 275 GFQTHLKWGEQKRVFRMIPGLENAEFVRYGVMHRNSFMNSPELLKPTYQSTKREDLFFAG 334 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 Q+ G GY E+AA GL+AGIN+AR + +++ + F + ++ IG M Sbjct: 335 QMTGVEGYVESAASGLLAGINAARLAKEMEPVEFPQ-ETAIGSM 377 >gi|312876488|ref|ZP_07736471.1| gid protein [Caldicellulosiruptor lactoaceticus 6A] gi|311796699|gb|EFR13045.1| gid protein [Caldicellulosiruptor lactoaceticus 6A] Length = 436 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 105/445 (23%), Positives = 169/445 (37%), Gaps = 95/445 (21%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGL---- 53 +++VIG G AG EAA AK G L HK T + C+ ++ Sbjct: 2 EIVVIGAGLAGVEAANAIAKFGIKVKLFEMKPKKFSPAHKIDTFAELVCSNSLKSKLLTN 61 Query: 54 GKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILS 113 G L E+ L+ A+A ++ G DR + + ++I Sbjct: 62 ASGLLKEEMKVFGSLVMEAAEATSVE------------AGQALAVDRYKFSEYITQKIRQ 109 Query: 114 QENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGR 173 ++VI EV TE V +D ++ C T LTT L + + Sbjct: 110 NGLIEVIHEEV----TE-------VPRDKVVVVC-TGPLTTQKLLSDI----------SK 147 Query: 174 MGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI 233 + +S + F++ P L K D F+ +K Sbjct: 148 LCESKNLYFFDA-------------AAPIVL-----------KDSIDFSKAFFASRYNKG 183 Query: 234 TNRQIECGITRTNLE--------THRIIMENIKHSAIYSG------------DIKSYGPR 273 +N I C +T+ E I +++ + ++ G D +GP Sbjct: 184 SNDYINCPMTKEEYEKFYWELVNAEVIEVKDFEKDLLFEGCIPIEEMARRGIDTMRFGPL 243 Query: 274 YCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVN 333 I D R G+ + L + + + G T L Q + R IPGLE Sbjct: 244 KPVGIIDP--RTGKMPYAVVQLRKDTQDGKLYNIVGFQTRLKWGEQKRVFRLIPGLENAE 301 Query: 334 IIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARK 392 +R G + YIN P+ L L KK +F AGQI G GY E+A+ G++AGIN+AR+ Sbjct: 302 FVRFGVMHKNSYINSPEVLTKYLFLKKYPNIFFAGQITGVEGYLESASTGIIAGINAARQ 361 Query: 393 SNKLDCICFSRTDSYIGVMIDDLTS 417 + + + + IG +I+ +T+ Sbjct: 362 VLGKEPVSLP-SSTCIGALIEYITT 385 >gi|257892285|ref|ZP_05671938.1| glucose inhibited division protein A [Enterococcus faecium 1,231,408] gi|257828664|gb|EEV55271.1| glucose inhibited division protein A [Enterococcus faecium 1,231,408] Length = 439 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 41/104 (39%), Positives = 59/104 (56%), Gaps = 2/104 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF-PTLETKKISGLFLAG 367 G T L Q + R IPGLE +R G ++N EL PT ++ K LF AG Sbjct: 275 GFQTHLKWGEQKRVFRMIPGLENAEFVRYGVMHRNSFMNSPELLKPTYQSTKREDLFFAG 334 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 Q+ G GY E+AA GL+AGIN+AR + +++ + F + ++ IG M Sbjct: 335 QMTGVEGYVESAASGLLAGINAARLAKEMEPVEFPQ-ETAIGSM 377 >gi|293570277|ref|ZP_06681346.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecium E980] gi|291609684|gb|EFF38945.1| tRNA:M(5)U-54 methyltransferase [Enterococcus faecium E980] Length = 441 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 41/104 (39%), Positives = 59/104 (56%), Gaps = 2/104 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF-PTLETKKISGLFLAG 367 G T L Q + R IPGLE +R G ++N EL PT ++ K LF AG Sbjct: 277 GFQTHLKWGEQKRVFRMIPGLENAEFVRYGVMHRNSFMNSPELLKPTYQSTKREDLFFAG 336 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 Q+ G GY E+AA GL+AGIN+AR + +++ + F + ++ IG M Sbjct: 337 QMTGVEGYVESAASGLLAGINAARLAKEMEPVEFPQ-ETAIGSM 379 >gi|16078676|ref|NP_389495.1| tRNA (uracil-5-)-methyltransferase Gid [Bacillus subtilis subsp. subtilis str. 168] gi|221309488|ref|ZP_03591335.1| tRNA (uracil-5-)-methyltransferase Gid [Bacillus subtilis subsp. subtilis str. 168] gi|221313813|ref|ZP_03595618.1| tRNA (uracil-5-)-methyltransferase Gid [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221318737|ref|ZP_03600031.1| tRNA (uracil-5-)-methyltransferase Gid [Bacillus subtilis subsp. subtilis str. JH642] gi|221323008|ref|ZP_03604302.1| tRNA (uracil-5-)-methyltransferase Gid [Bacillus subtilis subsp. subtilis str. SMY] gi|3183519|sp|P39815|TRMFO_BACSU RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|2462971|emb|CAA04423.1| Gid protein [Bacillus subtilis subsp. subtilis str. 168] gi|2633985|emb|CAB13486.1| tRNA:m(5)U-54 methyltransferase [Bacillus subtilis subsp. subtilis str. 168] gi|291484164|dbj|BAI85239.1| tRNA (uracil-5-)-methyltransferase Gid [Bacillus subtilis subsp. natto BEST195] Length = 435 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 45/110 (40%), Positives = 62/110 (56%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + ++ IPGLE V I+R G +IN P L PT + K S LF AG Sbjct: 279 GFQTHLKWGDQKEVLKLIPGLENVEIVRYGVMHRNTFINSPSLLKPTYQFKNRSDLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+AA GLVAGIN+A+ + + F + ++ IG M +T+ Sbjct: 339 QMTGVEGYVESAASGLVAGINAAKLVLGEELVIFPQ-ETAIGSMAHYITT 387 >gi|295692918|ref|YP_003601528.1| methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmfo [Lactobacillus crispatus ST1] gi|295031024|emb|CBL50503.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO [Lactobacillus crispatus ST1] Length = 438 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 42/110 (38%), Positives = 61/110 (55%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE +R G Y+ +P+ L + E K+ GLF AG Sbjct: 279 GFQTHLKFGEQKRVFSMIPGLENARFVRYGKMHRNTYMASPEVLTASYEAKEQPGLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+A GLVAGIN+AR++ D + F + D+ +G M + +T+ Sbjct: 339 QMTGVEGYVESAGSGLVAGINAAREAMGKDTVAFPK-DTALGSMTNYITT 387 >gi|308180664|ref|YP_003924792.1| tRNA:M(5)U-54 methyltransferase [Lactobacillus plantarum subsp. plantarum ST-III] gi|308046155|gb|ADN98698.1| tRNA:M(5)U-54 methyltransferase [Lactobacillus plantarum subsp. plantarum ST-III] Length = 441 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 43/109 (39%), Positives = 61/109 (55%), Gaps = 2/109 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE V +R G ++ +PK L PT +T++ LF AG Sbjct: 280 GFQTHLKWGEQKRVFSLIPGLENVEFVRYGVMHRNTFMKSPKLLTPTYQTQQRPDLFFAG 339 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 Q+ G GY E+AA G+VAG N+AR + L+ + F TD+ +G M +T Sbjct: 340 QMTGVEGYIESAASGIVAGTNAARLALGLEPVVFP-TDTMMGAMAHYIT 387 >gi|254556721|ref|YP_003063138.1| tRNA (uracil-5-)-methyltransferase Gid [Lactobacillus plantarum JDM1] gi|254045648|gb|ACT62441.1| tRNA (uracil-5-)-methyltransferase Gid [Lactobacillus plantarum JDM1] Length = 441 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 43/109 (39%), Positives = 61/109 (55%), Gaps = 2/109 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE V +R G ++ +PK L PT +T++ LF AG Sbjct: 280 GFQTHLKWGEQKRVFSLIPGLENVEFVRYGVMHRNTFMKSPKLLTPTYQTQQRPDLFFAG 339 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 Q+ G GY E+AA G+VAG N+AR + L+ + F TD+ +G M +T Sbjct: 340 QMTGVEGYIESAASGIVAGTNAARLALGLEPVVFP-TDTMMGAMAHYIT 387 >gi|195151125|ref|XP_002016498.1| GL10455 [Drosophila persimilis] gi|194110345|gb|EDW32388.1| GL10455 [Drosophila persimilis] Length = 154 Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 39/123 (31%), Positives = 77/123 (62%), Gaps = 6/123 (4%) Query: 502 RTAYEFLSYP--DFSIQNLFSICPDARKF---SSLVIERLQIESSYAAYTGRQMIEAKEI 556 +TA++ L+ P + ++ L ++ P + + + ERL+IE+ Y+ + Q + +++ Sbjct: 29 KTAFDMLAIPADNITVDKLINLFPTELSWLRDDNNLAERLKIEALYSFFVEEQQRDVEDV 88 Query: 557 KFEEKRLIPKDFDY-SSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 + EE+ IP D DY S + +LSNE ++KLS+++P + AS+I+G+TP+ + ++ Y+KK Sbjct: 89 RREERLAIPADIDYFSKVLSLSNEERQKLSLIQPQTIAAASRIQGVTPSTIVRIMKYVKK 148 Query: 616 NTV 618 V Sbjct: 149 ADV 151 >gi|3130085|dbj|BAA26108.1| unnamed protein product [Streptococcus mutans] Length = 217 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 42/104 (40%), Positives = 56/104 (53%), Gaps = 2/104 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE+ + +R G YI+ P L PT T K LF AG Sbjct: 61 GFQTHLKWSEQKRVFSMIPGLEQAHFVRYGVMHRNSYIDSPNLLAPTFATCKNPNLFFAG 120 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 Q+ G GY E+AA GLVAGIN+ R+ + + F +T + IG + Sbjct: 121 QMTGVEGYVESAASGLVAGINAVRRFKDEEAVIFPQTTA-IGAL 163 >gi|28378507|ref|NP_785399.1| tRNA (uracil-5-)-methyltransferase Gid [Lactobacillus plantarum WCFS1] gi|33516858|sp|Q88W23|TRMFO_LACPL RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|28271343|emb|CAD64248.1| glucose inhibited division protein GidC [Lactobacillus plantarum WCFS1] Length = 441 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 43/109 (39%), Positives = 61/109 (55%), Gaps = 2/109 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE V +R G ++ +PK L PT +T++ LF AG Sbjct: 280 GFQTHLKWGEQKRVFSLIPGLENVEFVRYGVMHRNTFMKSPKLLTPTYQTQQRPDLFFAG 339 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 Q+ G GY E+AA G+VAG N+AR + L+ + F TD+ +G M +T Sbjct: 340 QMTGVEGYIESAASGIVAGTNAARLALGLEPVVFP-TDTMMGAMAHYIT 387 >gi|310641537|ref|YP_003946295.1| methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmfo [Paenibacillus polymyxa SC2] gi|309246487|gb|ADO56054.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO [Paenibacillus polymyxa SC2] Length = 446 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE+ +R G +IN P++L PT + K S LF AG Sbjct: 281 GFQTHLKWGEQKRVFSMIPGLEEAEFVRYGVMHRNTFINSPQQLHPTYQFKGRSNLFFAG 340 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+AA GL+AGIN+AR + + F ++ +G M +T+ Sbjct: 341 QMTGVEGYVESAASGLLAGINAARAARGQEMFVFP-AETTLGSMARYITT 389 >gi|227879130|ref|ZP_03997014.1| tRNA (uracil-5-)-methyltransferase [Lactobacillus crispatus JV-V01] gi|256843163|ref|ZP_05548651.1| tRNA:m(5)U-54 methyltransferase [Lactobacillus crispatus 125-2-CHN] gi|256850238|ref|ZP_05555667.1| tRNA (uracil-5-)-methyltransferase Gid [Lactobacillus crispatus MV-1A-US] gi|262046370|ref|ZP_06019332.1| tRNA:m(5)U-54 methyltransferase [Lactobacillus crispatus MV-3A-US] gi|293380239|ref|ZP_06626320.1| tRNA:M(5)U-54 methyltransferase [Lactobacillus crispatus 214-1] gi|312977298|ref|ZP_07789046.1| tRNA:M(5)U-54 methyltransferase [Lactobacillus crispatus CTV-05] gi|227861287|gb|EEJ68922.1| tRNA (uracil-5-)-methyltransferase [Lactobacillus crispatus JV-V01] gi|256614583|gb|EEU19784.1| tRNA:m(5)U-54 methyltransferase [Lactobacillus crispatus 125-2-CHN] gi|256712875|gb|EEU27867.1| tRNA (uracil-5-)-methyltransferase Gid [Lactobacillus crispatus MV-1A-US] gi|260573241|gb|EEX29799.1| tRNA:m(5)U-54 methyltransferase [Lactobacillus crispatus MV-3A-US] gi|290923206|gb|EFE00128.1| tRNA:M(5)U-54 methyltransferase [Lactobacillus crispatus 214-1] gi|310895729|gb|EFQ44795.1| tRNA:M(5)U-54 methyltransferase [Lactobacillus crispatus CTV-05] Length = 438 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 42/110 (38%), Positives = 61/110 (55%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE +R G Y+ +P+ L + E K+ GLF AG Sbjct: 279 GFQTHLKFGEQKRVFSMIPGLENARFVRYGKMHRNTYMASPEVLTASYEAKEQPGLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+A GLVAGIN+AR++ D + F + D+ +G M + +T+ Sbjct: 339 QMTGVEGYVESAGSGLVAGINAAREAMGKDTVAFPK-DTALGSMANYITT 387 >gi|3130071|dbj|BAA26100.1| unnamed protein product [Streptococcus mutans] gi|3130078|dbj|BAA26104.1| unnamed protein product [Streptococcus mutans] gi|3130092|dbj|BAA26112.1| unnamed protein product [Streptococcus mutans] gi|3130102|dbj|BAA26118.1| unnamed protein product [Streptococcus mutans] Length = 217 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 42/104 (40%), Positives = 56/104 (53%), Gaps = 2/104 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE+ + +R G YI+ P L PT T K LF AG Sbjct: 61 GFQTHLKWSEQKRVFSMIPGLEQAHFVRYGVMHRNSYIDSPNLLAPTFATCKNPNLFFAG 120 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 Q+ G GY E+AA GLVAGIN+ R+ + + F +T + IG + Sbjct: 121 QMTGVEGYVESAASGLVAGINAVRRFKDEEAVIFPQTTA-IGAL 163 >gi|123968755|ref|YP_001009613.1| tRNA (uracil-5-)-methyltransferase Gid [Prochlorococcus marinus str. AS9601] gi|205830321|sp|A2BRU5|TRMFO_PROMS RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|123198865|gb|ABM70506.1| NAD binding site:Glucose inhibited division protein A family [Prochlorococcus marinus str. AS9601] Length = 470 Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 113/453 (24%), Positives = 179/453 (39%), Gaps = 98/453 (21%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGL----G 54 VI+IG G AG EAA A G L+ H TS G + C+ + G L Sbjct: 6 VIIIGAGLAGSEAAWQVASSGVPVKLVEMRPIKSTPAHHTSEFGELVCSNSFGALSPDRA 65 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L +E+ + L+ + AD + PA G DR + +A+ + + Sbjct: 66 AGLLQKELRIFNSLIVQTADKFAV----------PA--GGALAVDRSKFSIALTEALSNH 113 Query: 115 ENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLK----IP 170 +++ + E +++NI +L TG + K++ I Sbjct: 114 PLIEIKRFEQLDLPSKENI----------------TILATGPLTADELSY-KIQAFTGID 156 Query: 171 AGRMGDSPSNSLFNSFMKFD--FDTGRLKTGTPARLD-----------------GKTIIW 211 A D+ S ++ + + F R G PA + G+ + Sbjct: 157 ACHFFDAASPIIYGDTIDQEIVFKASRYDKGDPAYFNCPMGKNDYINFRNELIKGEQVNL 216 Query: 212 DKTEKQFAD--ERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKS 269 EK+ A+ E +P I R ++T R G +KS Sbjct: 217 KDFEKESANFFEACLPIE-------------EIARRGVDTMRY------------GPLKS 251 Query: 270 YG---PRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTI 326 G P++ + D+ R +R + L E L ++ G T L Q + R I Sbjct: 252 IGLWNPKWG-DLFDRENRLKKRPHAVVQLRKEDLEGKLLNMVGFQTNLKWSEQKRIFRLI 310 Query: 327 PGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVA 385 PGLEK +R G ++ +PK L PTL+ K LF AGQI GT GY AAA GL+A Sbjct: 311 PGLEKAEFVRFGVMHRNTFLESPKLLLPTLQFLKRENLFAAGQITGTEGYAAAAAGGLLA 370 Query: 386 GINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 GIN++ + + F S IG +++ +++K Sbjct: 371 GINASLLAKGKKTVSFP-DQSMIGSLMNFISNK 402 >gi|329929263|ref|ZP_08283016.1| tRNA:m(5)U-54 methyltransferase [Paenibacillus sp. HGF5] gi|328936632|gb|EGG33075.1| tRNA:m(5)U-54 methyltransferase [Paenibacillus sp. HGF5] Length = 444 Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 44/104 (42%), Positives = 58/104 (55%), Gaps = 2/104 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + I IPGLE I+R G ++N PK L T + K L+LAG Sbjct: 283 GFQTHLKWGEQKRIISMIPGLENAEIVRYGVMHRNTFVNSPKLLEQTYQVKTRPNLYLAG 342 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 Q+ G GY E+AA GL+AGIN+AR + + I F + +S IG M Sbjct: 343 QMTGVEGYVESAASGLIAGINAARAAQGREGIVFPQ-ESTIGSM 385 >gi|24379443|ref|NP_721398.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus mutans UA159] gi|26006973|sp|P05428|TRMFO_STRMU RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|24377377|gb|AAN58704.1|AE014939_11 putative glucose-inhibited division protein [Streptococcus mutans UA159] Length = 444 Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 42/104 (40%), Positives = 56/104 (53%), Gaps = 2/104 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE+ + +R G YI+ P L PT T K LF AG Sbjct: 288 GFQTHLKWSEQKRVFSMIPGLEQAHFVRYGVMHRNSYIDSPNLLAPTFATCKNPNLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 Q+ G GY E+AA GLVAGIN+ R+ + + F +T + IG + Sbjct: 348 QMTGVEGYVESAASGLVAGINAVRRFKDEEAVIFPQTTA-IGAL 390 >gi|290580545|ref|YP_003484937.1| putative glucose-inhibited division protein [Streptococcus mutans NN2025] gi|254997444|dbj|BAH88045.1| putative glucose-inhibited division protein [Streptococcus mutans NN2025] Length = 444 Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 42/104 (40%), Positives = 56/104 (53%), Gaps = 2/104 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE+ + +R G YI+ P L PT T K LF AG Sbjct: 288 GFQTHLKWSEQKRVFSMIPGLEQAHFVRYGVMHRNSYIDSPNLLAPTFATCKNPNLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 Q+ G GY E+AA GLVAGIN+ R+ + + F +T + IG + Sbjct: 348 QMTGVEGYVESAASGLVAGINAVRRFKDEEAVIFPQTTA-IGAL 390 >gi|261407990|ref|YP_003244231.1| gid protein [Paenibacillus sp. Y412MC10] gi|261284453|gb|ACX66424.1| gid protein [Paenibacillus sp. Y412MC10] Length = 442 Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 44/104 (42%), Positives = 58/104 (55%), Gaps = 2/104 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + I IPGLE I+R G ++N PK L T + K L+LAG Sbjct: 281 GFQTHLKWGEQKRIISMIPGLENAEIVRYGVMHRNTFVNSPKLLEQTYQVKTRPNLYLAG 340 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 Q+ G GY E+AA GL+AGIN+AR + + I F + +S IG M Sbjct: 341 QMTGVEGYVESAASGLIAGINAARAAQGREGIVFPQ-ESTIGSM 383 >gi|296133057|ref|YP_003640304.1| gid protein [Thermincola sp. JR] gi|296031635|gb|ADG82403.1| gid protein [Thermincola potens JR] Length = 435 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 48/139 (34%), Positives = 68/139 (48%), Gaps = 3/139 (2%) Query: 270 YGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGL 329 +GP +E+ + GER + L + + + G T L Q + R IPGL Sbjct: 242 FGPMKPVGLENP--KTGERPYAVVQLRQDDMEGTLYNIVGFQTHLKWGEQQRVFRMIPGL 299 Query: 330 EKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGIN 388 EK +R G +IN P L PT + +K LF AGQI G GY E+AA GL+AGIN Sbjct: 300 EKAEFVRYGVMHRNTFINSPTVLEPTFQFRKRKDLFFAGQITGVEGYVESAAAGLMAGIN 359 Query: 389 SARKSNKLDCICFSRTDSY 407 +AR + + F ++ Sbjct: 360 AARLVKGQEPVVFPPATAH 378 >gi|299822638|ref|ZP_07054524.1| tRNA:M(5)U-54 methyltransferase [Listeria grayi DSM 20601] gi|299816167|gb|EFI83405.1| tRNA:M(5)U-54 methyltransferase [Listeria grayi DSM 20601] Length = 440 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 2/109 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE I+R G +IN P+ L PT + K LF AG Sbjct: 284 GFQTHLKWGEQKRVFQMIPGLENAEIVRYGVMHRNTFINSPEILLPTYQLKAREDLFFAG 343 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 Q+ G GY E+AA GL AGIN+A+ + + I F R ++ IG M +T Sbjct: 344 QMTGVEGYVESAASGLAAGINAAKYVSGEEPITFPR-ETAIGSMAHYIT 391 >gi|317121808|ref|YP_004101811.1| gid protein [Thermaerobacter marianensis DSM 12885] gi|315591788|gb|ADU51084.1| gid protein [Thermaerobacter marianensis DSM 12885] Length = 508 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 41/94 (43%), Positives = 53/94 (56%), Gaps = 1/94 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T+L Q + R IPGLE R G +I +PK L PT++T+K LF AG Sbjct: 280 GFQTSLKWGEQKRVFRMIPGLENAEFARYGVMHRNTFICSPKILHPTMQTRKRPDLFFAG 339 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICF 401 QI G GY E+AA G+VAGIN+AR + + F Sbjct: 340 QITGVEGYIESAATGIVAGINAARLVRGEEPVAF 373 >gi|256851130|ref|ZP_05556519.1| tRNA:m(5)U-54 methyltransferase [Lactobacillus jensenii 27-2-CHN] gi|260660554|ref|ZP_05861469.1| tRNA:m(5)U-54 methyltransferase [Lactobacillus jensenii 115-3-CHN] gi|282932231|ref|ZP_06337675.1| tRNA:M(5)U-54 methyltransferase [Lactobacillus jensenii 208-1] gi|297205995|ref|ZP_06923390.1| (FADH(2)-oxidizing) protein [Lactobacillus jensenii JV-V16] gi|256616192|gb|EEU21380.1| tRNA:m(5)U-54 methyltransferase [Lactobacillus jensenii 27-2-CHN] gi|260548276|gb|EEX24251.1| tRNA:m(5)U-54 methyltransferase [Lactobacillus jensenii 115-3-CHN] gi|281303626|gb|EFA95784.1| tRNA:M(5)U-54 methyltransferase [Lactobacillus jensenii 208-1] gi|297149121|gb|EFH29419.1| (FADH(2)-oxidizing) protein [Lactobacillus jensenii JV-V16] Length = 439 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 43/110 (39%), Positives = 59/110 (53%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE +R G Y+ +P L T E KK +GLF AG Sbjct: 279 GFQTHLKYGEQKRVFSMIPGLENARFVRYGKMHRNTYMASPDVLNATYEAKKQAGLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+A GLVAGIN++R + LD F ++ +G M + +T+ Sbjct: 339 QMTGVEGYVESAGSGLVAGINASRLARGLDLATFP-VETALGSMANYITT 387 >gi|294614818|ref|ZP_06694713.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gid [Enterococcus faecium E1636] gi|291592280|gb|EFF23894.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gid [Enterococcus faecium E1636] Length = 196 Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats. Identities = 41/104 (39%), Positives = 59/104 (56%), Gaps = 2/104 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF-PTLETKKISGLFLAG 367 G T L Q + R IPGLE +R G ++N EL PT ++ K LF AG Sbjct: 32 GFQTHLKWGEQKRVFRMIPGLENAEFVRYGVMHRNSFMNSPELLKPTYQSTKREDLFFAG 91 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 Q+ G GY E+AA GL+AGIN+AR + +++ + F + ++ IG M Sbjct: 92 QMTGVEGYVESAASGLLAGINAARLAKEMEPVEFPQ-ETAIGSM 134 >gi|260886590|ref|ZP_05897853.1| tRNA:M(5)U-54 methyltransferase [Selenomonas sputigena ATCC 35185] gi|330839576|ref|YP_004414156.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO [Selenomonas sputigena ATCC 35185] gi|260863733|gb|EEX78233.1| tRNA:M(5)U-54 methyltransferase [Selenomonas sputigena ATCC 35185] gi|329747340|gb|AEC00697.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO [Selenomonas sputigena ATCC 35185] Length = 437 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 103/426 (24%), Positives = 163/426 (38%), Gaps = 76/426 (17%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGLGKGHL 58 VIV+G G AG EAA AA+ GA L HKT+ + C+ ++ G G + Sbjct: 4 VIVVGAGLAGSEAAWQAAESGAQVTLYEMRPADSSPAHKTADFAELVCSNSLRGAGLENA 63 Query: 59 VREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLD 118 V + +G + AA RV PA G DRE + + ++ + ++ Sbjct: 64 VGVLKEEMRRLGSLVMAAADATRV------PA--GGALAVDREGFSRFITEKLTAHPRVE 115 Query: 119 VIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS- 177 V++ V +I +++++ ++ LT G + + MGD+ Sbjct: 116 VVRMRV----------ETIPREEDAVTIVASGPLTDGALAACLREM---------MGDAS 156 Query: 178 --------PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM 229 P +L + M + R G PA ++ M Sbjct: 157 FYFYDAAAPIVTLESIDMTKAYRASRYGKGEPAYINCP---------------------M 195 Query: 230 TDKITNRQIECGITRTNLETHR----IIMENIKHSAIYSGDIKS---YGPRYCPSIEDKI 282 T++ + T E H + E + + +S +GP +ED Sbjct: 196 TEEEYRAFWQALTTAETAELHSFEKPVFFEGCMPVEVMASRGESTLLFGPLKPVGLEDP- 254 Query: 283 VRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIE 342 + G R + L + + G T L Q + IPGLE +R G Sbjct: 255 -KTGVRPHAVVQLRQDNATGTLYNIVGFQTHLKWGEQRRVFCMIPGLENAEFMRYGVMHR 313 Query: 343 YDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICF 401 YI+ P+ L PT + KK + L AGQ+ G GY E+AA GLVAGIN+AR + F Sbjct: 314 NTYIDSPRLLAPTYQLKKEAELLFAGQMTGVEGYVESAASGLVAGINAARLAKGQRPFVF 373 Query: 402 SRTDSY 407 R + Sbjct: 374 PRETCH 379 >gi|258508407|ref|YP_003171158.1| tRNA (uracil-5-)-methyltransferase Gid [Lactobacillus rhamnosus GG] gi|257148334|emb|CAR87307.1| Glucose inhibited division protein A [Lactobacillus rhamnosus GG] gi|259649722|dbj|BAI41884.1| tRNA (uracil-5-)-methyltransferase Gid [Lactobacillus rhamnosus GG] Length = 440 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 52/156 (33%), Positives = 76/156 (48%), Gaps = 17/156 (10%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE I+R G ++ +P L PT +K+ LF AG Sbjct: 278 GFQTHLKWGEQKRVFRMIPGLEHAQIVRYGVMHRNTFMKSPVVLEPTYASKRRGDLFFAG 337 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 Q+ G GY E+AA GL+AG N+AR + I F +T T+ G + Y Sbjct: 338 QMTGVEGYVESAASGLIAGTNAARLALGQTPIAFPQT-----------TAMGAMAHYITH 386 Query: 428 TSRAEYRISLRPDNAD-NRLTPIGMKLGCIGERRQK 462 TS + + +P NA+ + P+ +K+ ER Q+ Sbjct: 387 TSPSHF----QPMNANFGIMPPLAVKVRNKKERNQQ 418 >gi|199599533|ref|ZP_03212921.1| tRNA uridine 5-carboxymethylaminomethyl modification FAD-utilizing enzyme [Lactobacillus rhamnosus HN001] gi|199589574|gb|EDY97692.1| tRNA uridine 5-carboxymethylaminomethyl modification FAD-utilizing enzyme [Lactobacillus rhamnosus HN001] Length = 439 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 52/156 (33%), Positives = 76/156 (48%), Gaps = 17/156 (10%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE I+R G ++ +P L PT +K+ LF AG Sbjct: 277 GFQTHLKWGEQKRVFRMIPGLEHAQIVRYGVMHRNTFMKSPVVLEPTYASKRRGDLFFAG 336 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 Q+ G GY E+AA GL+AG N+AR + I F +T T+ G + Y Sbjct: 337 QMTGVEGYVESAASGLIAGTNAARLALGQTPIAFPQT-----------TAMGAMAHYITH 385 Query: 428 TSRAEYRISLRPDNAD-NRLTPIGMKLGCIGERRQK 462 TS + + +P NA+ + P+ +K+ ER Q+ Sbjct: 386 TSPSHF----QPMNANFGIMPPLAVKVRNKKERNQQ 417 >gi|205830471|sp|Q38WZ1|TRMFO_LACSS RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase Length = 436 Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 42/109 (38%), Positives = 60/109 (55%), Gaps = 2/109 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE +R G ++ +P L PT ++K+ S LF AG Sbjct: 280 GFQTHLKWGEQKRVFRMIPGLENAEFVRYGVMHRNTFMKSPDVLLPTYQSKQRSDLFFAG 339 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 Q+ G GY E+AA GLVAGIN++R + + + F T + +G M +T Sbjct: 340 QMTGVEGYVESAASGLVAGINASRLALDTEPVTFPATTA-MGSMAHYIT 387 >gi|288553073|ref|YP_003425008.1| tRNA (uracil-5-)-methyltransferase Gid [Bacillus pseudofirmus OF4] gi|288544233|gb|ADC48116.1| tRNA (uracil-5-)-methyltransferase Gid [Bacillus pseudofirmus OF4] Length = 435 Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 43/110 (39%), Positives = 60/110 (54%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + ++ IPGLE I+R G +IN P L T + K LF AG Sbjct: 279 GFQTHLKWGPQKEVLKLIPGLENAEIVRYGVMHRNTFINSPNLLKSTYQYKDREDLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 QI G GY E+AA GL+AGIN+AR N + + F ++ +G M + +T+ Sbjct: 339 QITGVEGYVESAAAGLIAGINAARLVNNEELLTFPE-ETVLGSMANYITT 387 >gi|295696105|ref|YP_003589343.1| gid protein [Bacillus tusciae DSM 2912] gi|295411707|gb|ADG06199.1| gid protein [Bacillus tusciae DSM 2912] Length = 439 Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 39/94 (41%), Positives = 52/94 (55%), Gaps = 1/94 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE+ R G Y+N P+ L PT +T++ LF AG Sbjct: 277 GFQTHLRWGEQSRVFRLIPGLEEAEFARFGVMHRNTYLNSPRLLLPTYQTRRRKTLFFAG 336 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICF 401 QI G GY E+AA GL+AGIN+ R + D + + Sbjct: 337 QITGVEGYVESAASGLIAGINAGRLARGEDPLTW 370 >gi|308068646|ref|YP_003870251.1| protein gid-like protein [Paenibacillus polymyxa E681] gi|305857925|gb|ADM69713.1| Protein gid-like protein [Paenibacillus polymyxa E681] Length = 446 Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 41/110 (37%), Positives = 60/110 (54%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE+ +R G +IN P++L PT + K S LF AG Sbjct: 281 GFQTHLKWGEQKRVFSMIPGLEEAEFVRYGVMHRNTFINSPQQLHPTYQFKGRSNLFFAG 340 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+AA GL+AG+N+AR + + F ++ +G M +T+ Sbjct: 341 QMTGVEGYVESAASGLLAGMNAARAARGQEMFVFP-AETTLGSMARYITT 389 >gi|254525767|ref|ZP_05137819.1| tRNA:m(5)U-54 methyltransferase [Prochlorococcus marinus str. MIT 9202] gi|221537191|gb|EEE39644.1| tRNA:m(5)U-54 methyltransferase [Prochlorococcus marinus str. MIT 9202] Length = 470 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 114/438 (26%), Positives = 174/438 (39%), Gaps = 56/438 (12%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIG 51 MI++ VIVIG G AG EAA A G L+ H T G + C+ + G Sbjct: 1 MIDKK--VIVIGAGLAGSEAAWQVANAGVPVELVEMRPVKSTPAHHTGEFGELVCSNSFG 58 Query: 52 GL----GKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAM 107 L G L +E+ L+ + AD + PA G DR + +A+ Sbjct: 59 ALNPDRAAGLLQKELRIFKSLIIQTADKFAV----------PA--GGALAVDRSKFSIAL 106 Query: 108 QREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKL 167 + S +++ + E ++ I S + TG + H Sbjct: 107 TEALSSHPLIEIKRFEQLDLPRKEKITILATGPLTSDELSYKIQAFTG---KDACHFFDA 163 Query: 168 KIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFS 227 P GDS + F R G PA L+ DK + +LI Sbjct: 164 ASPIIS-GDSIDQEIV-------FKASRYDKGDPAYLNCPM---DKNDYMHFRNQLIEGE 212 Query: 228 FMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYS---GDIKSYG---PRYCPSIEDK 281 K ++ N + +E I + + G +KS G P++ + D+ Sbjct: 213 QANLKDFEKE------SANFFEACLPIEEIARRGVDTMRFGPLKSIGLWNPKWG-DLFDR 265 Query: 282 IVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAI 341 R +R + L E L ++ G T L Q + R IPGLEK +R G Sbjct: 266 ENRLKKRPHAIVQLRKEDLEGKLLNMVGFQTNLKWSEQKRIFRMIPGLEKAEFVRFGVMH 325 Query: 342 EYDYI-NPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCIC 400 ++ +P L PTL+ K LF AGQI GT GY AAA GL+AGIN++ + + Sbjct: 326 RNTFLESPNLLLPTLQFMKRENLFAAGQITGTEGYAAAAAGGLLAGINASLLAKGKKTVS 385 Query: 401 FSRTDSYIGVMIDDLTSK 418 F + +S IG +I+ +++K Sbjct: 386 FPK-ESMIGSLINFISNK 402 >gi|297624866|ref|YP_003706300.1| gid protein [Truepera radiovictrix DSM 17093] gi|297166046|gb|ADI15757.1| gid protein [Truepera radiovictrix DSM 17093] Length = 442 Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 122/499 (24%), Positives = 191/499 (38%), Gaps = 84/499 (16%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGLG---- 54 + VIG G AG +AA AAKLG AL H+T + + C+ + GG G Sbjct: 6 LTVIGAGMAGSDAAFAAAKLGVKVALYEMRPAKMTPAHRTGSFAELVCSNSFGGEGEANA 65 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 KG L RE+ A GL+ A A + PA G DRE + + + Sbjct: 66 KGLLQREMLAAGGLVMTSAHATRV----------PA--GGALAVDREAFSARVTEALCEH 113 Query: 115 ENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRM 174 N+ V E+ +++S + +++ ++ + G G I Sbjct: 114 PNITVHTEELTELPDGVVVVASGPLTSDAL--AESLRKSVGEDFLGFYDAAAPVI----- 166 Query: 175 GDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFS-----FM 229 D S + ++ K +D Q AD +PF+ Sbjct: 167 -DIDSIDMGIAYRKGRYD------------------------QAADYLNLPFTKEQYDAW 201 Query: 230 TDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERN 289 D +T + LE M I+ A D +GP +E GER Sbjct: 202 YDALTRARQHTPHDWEKLEFFEGCMP-IEELARRGPDTPRFGPLKPVGLEHP--ETGERP 258 Query: 290 GHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-P 348 L E + G T L Q + +R IPGL+ ++R G Y+N P Sbjct: 259 YAVAQLRQEDARGQMWSLVGFQTGLKWGDQKEVVRLIPGLQNAEVVRYGVMHRNTYLNAP 318 Query: 349 KELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYI 408 + L P L + LF+AG + GT GY E++A G +AG N+AR+ L + T S + Sbjct: 319 RLLTPHLNLRAHPRLFVAGVLAGTEGYLESSATGWLAGTNAARQLLGLAPVLPPET-SML 377 Query: 409 GVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIG--ERRQKRFAK 466 G ++ L S + +P NA+ L P K+ G ERR + F + Sbjct: 378 GGLVRYLASANP--------------DNFQPMNANWSLVPALPKVRGEGKKERRARAFRR 423 Query: 467 YIQEY-NFLRSLLKSLVLT 484 ++ + +L+ + VL+ Sbjct: 424 GLEAFEGWLQEVTTPPVLS 442 >gi|314933430|ref|ZP_07840795.1| tRNA:M(5)U-54 methyltransferase [Staphylococcus caprae C87] gi|313653580|gb|EFS17337.1| tRNA:M(5)U-54 methyltransferase [Staphylococcus caprae C87] Length = 435 Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 118/472 (25%), Positives = 177/472 (37%), Gaps = 103/472 (21%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGL----G 54 V VIG G AG EAA A+ G + LI H T + C+ ++ G Sbjct: 5 VNVIGAGLAGSEAAYQLAQRGLNVNLIEMRPVKQTPAHHTDKFAELVCSNSLRGNSLTNA 64 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L E+ LD L+ + AD A + PA G DR + + + + Sbjct: 65 VGVLKEEMRRLDSLIIQAADKARV----------PA--GGALAVDRHDFAGYITDTLRNH 112 Query: 115 ENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHI-GKLKI---- 169 N+ V+ EV II+ T LTT + ++ I GK ++ Sbjct: 113 PNVTVLNKEVNHIPEGYTIIA-------------TGPLTTEHLAQEIVDITGKDQLYFYD 159 Query: 170 PAGRMGDSPSNSLFNSFMKFDFDTGR------------LKTGTPARLDGKTIIWDKTEKQ 217 A + + + + ++K +D G A L+ + ++ EK+ Sbjct: 160 AAAPIVEKDTIDMNKVYLKSRYDKGEAAYLNCPMTEEEFNRFYDAVLEAEVAPVNEFEKE 219 Query: 218 FADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPS 277 E +PF M ++ R L +GP Sbjct: 220 KYFEGCMPFEVMAER----------GRKTL---------------------LFGPMKPVG 248 Query: 278 IEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRP 337 +ED + GER + L + + G T L Q + IR IPGLE V+I+R Sbjct: 249 LEDP--KTGERPYAVVQLRQDDAAGTLYNIVGFQTHLKWGAQKEVIRLIPGLENVDIVRY 306 Query: 338 GYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKL 396 G +IN P L E + L+ AGQ+ G GY E+AA GLVAGIN A K Sbjct: 307 GVMHRNTFINSPDVLNEKYELEGHEHLYFAGQMTGVEGYVESAASGLVAGINLAHKLAGK 366 Query: 397 DCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTP 448 + F R ++ IG M + S A+ + +P NA+ L P Sbjct: 367 GEVIFPR-ETMIGSMA-------------YYISHAKNEKNFQPMNANFGLLP 404 >gi|227893506|ref|ZP_04011311.1| tRNA (uracil-5-)-methyltransferase Gid [Lactobacillus ultunensis DSM 16047] gi|227864676|gb|EEJ72097.1| tRNA (uracil-5-)-methyltransferase Gid [Lactobacillus ultunensis DSM 16047] Length = 438 Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 54/157 (34%), Positives = 77/157 (49%), Gaps = 18/157 (11%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE +R G Y+ +P L + E KK GLF AG Sbjct: 279 GFQTHLKFGEQKRVFSMIPGLENARFVRYGKMHRNTYMASPDILTASYEAKKQPGLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 Q+ G GY E+A GLVAGIN+AR++ + + F + D+ +G M + +T Sbjct: 339 QMTGVEGYVESAGSGLVAGINAAREAMGEETVAFPK-DTALGSMANYVT----------- 386 Query: 428 TSRAEYRISLRPDNADNRLTPI--GMKLGCIGERRQK 462 T+ A++ +P NA L P G K+ ER +K Sbjct: 387 TTSAKH---FQPMNASFALLPALEGKKIRKKRERHEK 420 >gi|520754|gb|AAA22764.1| putative [Bacillus subtilis] Length = 363 Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 40/84 (47%), Positives = 50/84 (59%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + ++ IPGLE V I+R G +IN P L PT + K S LF AG Sbjct: 279 GFQTHLKWGDQKEVLKLIPGLENVEIVRYGVMHRNTFINSPSLLKPTYQFKNRSDLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GLVAGIN+A+ Sbjct: 339 QMTGVEGYVESAASGLVAGINAAK 362 >gi|223044221|ref|ZP_03614258.1| tRNA:M(5)U-54 methyltransferase [Staphylococcus capitis SK14] gi|222442371|gb|EEE48479.1| tRNA:M(5)U-54 methyltransferase [Staphylococcus capitis SK14] Length = 435 Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 117/472 (24%), Positives = 176/472 (37%), Gaps = 103/472 (21%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGL----G 54 V V+G G AG EAA A+ G LI H T + C+ ++ G Sbjct: 5 VNVVGAGLAGSEAAYQLAQRGVKVNLIEMRPVKQTPAHHTDKFAELVCSNSLRGNSLTNA 64 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L E+ LD L+ + AD A + PA G DR + + + + Sbjct: 65 VGVLKEEMRRLDSLIIQAADKARV----------PA--GGALAVDRHDFAGYITDTLRNH 112 Query: 115 ENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHI-GKLKI---- 169 N+ V+ EV II+ T LTT + ++ I GK ++ Sbjct: 113 PNITVLNEEVNHIPEGYTIIA-------------TGPLTTEHLAQEIVDITGKDQLYFYD 159 Query: 170 PAGRMGDSPSNSLFNSFMKFDFDTGR------------LKTGTPARLDGKTIIWDKTEKQ 217 A + + + + ++K +D G A L+ + ++ EK+ Sbjct: 160 AAAPIVEKDTIDMNKVYLKSRYDKGEAAYLNCPMTEEEFNRFYDAVLEAEVAPVNEFEKE 219 Query: 218 FADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPS 277 E +PF M ++ R L +GP Sbjct: 220 KYFEGCMPFEVMAER----------GRKTL---------------------LFGPMKPVG 248 Query: 278 IEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRP 337 +ED + GER + L + + G T L Q + IR IPGLE V+I+R Sbjct: 249 LEDP--KTGERPYAVVQLRQDDAAGTLYNIVGFQTHLKWGAQKEVIRLIPGLENVDIVRY 306 Query: 338 GYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKL 396 G +IN P L E + L+ AGQ+ G GY E+AA GLVAGIN A K Sbjct: 307 GVMHRNTFINSPDVLNEKYELEGHDHLYFAGQMTGVEGYVESAASGLVAGINLAHKLAGK 366 Query: 397 DCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTP 448 + F R ++ IG M + S A+ + +P NA+ L P Sbjct: 367 GEVIFPR-ETMIGSMA-------------YYISHAKNEKNFQPMNANFGLLP 404 >gi|188586008|ref|YP_001917553.1| gid protein [Natranaerobius thermophilus JW/NM-WN-LF] gi|205830312|sp|B2A334|TRMFO_NATTJ RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|179350695|gb|ACB84965.1| gid protein [Natranaerobius thermophilus JW/NM-WN-LF] Length = 433 Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 49/149 (32%), Positives = 67/149 (44%), Gaps = 25/149 (16%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE+ +R G +IN PK L + ++ GLF AG Sbjct: 277 GFQTRLKWPEQRRVFRKIPGLEEAEFVRYGVMHRNTFINSPKVLTANYQLRERPGLFFAG 336 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 Q+ G GY E+ A GLVAG+N+ARK + + F R T+ G L Sbjct: 337 QVTGVEGYVESTASGLVAGLNAARKLQGNETLTFPRE-----------TALGAL------ 379 Query: 428 TSRAEYRISLRPDNADNRLTPIGMKLGCI 456 A Y + PDN P+ + G + Sbjct: 380 ---ASYIVEASPDN----FQPMNINFGLL 401 Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust. Identities = 40/151 (26%), Positives = 65/151 (43%), Gaps = 26/151 (17%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGL----G 54 + VIGGG AG EAA AA+ G + L HKT + + C+ ++ Sbjct: 3 LTVIGGGLAGSEAAYQAAQQGVTVDLYEMRPVKTTAAHKTGELAELVCSNSLRAKSLENA 62 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L E+ D L+ +VAD + PA G DRE + + I + Sbjct: 63 AGLLKEELRKFDSLIMKVADQVQV----------PA--GGALAVDREAFSQKVTEYIENH 110 Query: 115 ENLDVIQGEVAGFN-TEKNIISSIVMQDNSM 144 N+++I EV N ++ +I++ + S+ Sbjct: 111 PNINLITEEVTEINESQPTVIATGPLTSTSL 141 >gi|157413587|ref|YP_001484453.1| tRNA (uracil-5-)-methyltransferase Gid [Prochlorococcus marinus str. MIT 9215] gi|205830317|sp|A8G5I6|TRMFO_PROM2 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|157388162|gb|ABV50867.1| NAD(FAD)-utilizing enzyme possibly involved in translation [Prochlorococcus marinus str. MIT 9215] Length = 470 Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 114/444 (25%), Positives = 180/444 (40%), Gaps = 68/444 (15%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIG 51 MI++ VIVIG G AG EAA A G L+ H T G + C+ + G Sbjct: 1 MIDKK--VIVIGAGLAGSEAAWQVANAGVPVKLVEMRPFKSTPAHHTGEFGELVCSNSFG 58 Query: 52 GL----GKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAM 107 L G L +E+ L+ + AD + PA G DR + +A+ Sbjct: 59 ALNPDRAAGLLQKELRIFKSLIIQTADKFAV----------PA--GGALAVDRSKFSMAL 106 Query: 108 QREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKL 167 + S +++ + E ++ I +L TG + K+ Sbjct: 107 TEALSSHPLIEIERFEQLDLPRKEKI----------------TILATGPLTSDELSY-KI 149 Query: 168 K----IPAGRMGDSPSNSLFNSFMKFD--FDTGRLKTGTPARLDGKTIIWDKTEKQFADE 221 + I A D+ S ++ + + F R G PA L+ DK Sbjct: 150 QAFTGIDACHFFDAASPIIYGDSIDQEIVFKASRYDKGDPAYLNCPM---DKNNYIHFRN 206 Query: 222 RLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYS---GDIKSYG---PRYC 275 +LI K ++ N + +E I + + G +KS G P++ Sbjct: 207 QLIEGEQANLKDFEKE------SANFFEACLPIEEIARRGVDTMRFGPLKSIGLWNPKWG 260 Query: 276 PSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNII 335 + D+ R +R + L E L ++ G T L Q + R IPGLEK + Sbjct: 261 -DLFDRENRLKKRPYAIVQLRKEDLEGKLLNMVGFQTNLKWSEQKRIFRMIPGLEKAEFV 319 Query: 336 RPGYAIEYDYI-NPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSN 394 R G ++ +P L PTL+ K + LF AGQI GT GY AAA GL+AGIN++ + Sbjct: 320 RFGVMHRNTFLESPNLLLPTLQFMKRNNLFAAGQITGTEGYAAAAAGGLLAGINASLLAK 379 Query: 395 KLDCICFSRTDSYIGVMIDDLTSK 418 + F + +S IG +I+ +++K Sbjct: 380 GKKTVSFPK-ESMIGSLINFISNK 402 >gi|332686607|ref|YP_004456381.1| tRNA m(5)U-54 MTase gid [Melissococcus plutonius ATCC 35311] gi|332370616|dbj|BAK21572.1| tRNA m(5)U-54 MTase gid [Melissococcus plutonius ATCC 35311] Length = 436 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 50/143 (34%), Positives = 71/143 (49%), Gaps = 4/143 (2%) Query: 270 YGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGL 329 +GP +ED + G+R I L + + G T L Q + + IPGL Sbjct: 241 FGPMKPVGLEDP--KTGKRPFAVIQLRQDNAAASLYNMVGFQTHLKWGEQKRVFQMIPGL 298 Query: 330 EKVNIIRPGYAIEYDYINPKELF-PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGIN 388 E IR G +IN EL PT +++K LF AGQ+ G GY E+AA GL+AGIN Sbjct: 299 ENAEFIRYGVMHRNSFINSPELLKPTYQSQKRDNLFFAGQMTGVEGYVESAASGLLAGIN 358 Query: 389 SARKSNKLDCICFSRTDSYIGVM 411 +AR + + F R ++ +G M Sbjct: 359 AARLTKNNVPLIFPR-ETVLGSM 380 >gi|298571315|gb|ADI87659.1| tRNA (uracil-5-)-methyltransferase Gid [uncultured Nitrospirae bacterium MY2-1F] gi|298571416|gb|ADI87757.1| tRNA (uracil-5-)-methyltransferase Gid [uncultured Nitrospirae bacterium MY3-11A] Length = 410 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 52/165 (31%), Positives = 80/165 (48%), Gaps = 16/165 (9%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q R +PGLEK +R G YI+ P+ L L K + +F+AG Sbjct: 251 GCQTRLKYTEQSHVFRLVPGLEKAEFLRYGSIHRNTYIDSPRHLNKNLTLKSMPNIFIAG 310 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 QI G GY E+ A GL+AGI +ARK LD + SR + G +I+ +T G +P Sbjct: 311 QITGVEGYLESTAMGLLAGIYTARKLRGLDEVLPSRYTA-CGSLIEHIT--GAAQPS--- 364 Query: 428 TSRAEYRISLRPDNAD-NRLTPIGMKLGCIGERRQKRFAKYIQEY 471 + +P N + L P+ + + ++RQ A+ + ++ Sbjct: 365 --------TFQPSNINFGLLPPLSVPIRDKAKKRQAVVARALADW 401 >gi|315648143|ref|ZP_07901244.1| gid protein [Paenibacillus vortex V453] gi|315276789|gb|EFU40132.1| gid protein [Paenibacillus vortex V453] Length = 442 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 42/104 (40%), Positives = 58/104 (55%), Gaps = 2/104 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE I+R G ++N PK L T + K L+LAG Sbjct: 281 GFQTHLKWGEQKRVLSMIPGLENAEIVRYGVMHRNTFVNSPKLLEQTYQVKTRPNLYLAG 340 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 Q+ G GY E+AA GL+AGIN+AR + + + F + +S IG M Sbjct: 341 QMTGVEGYVESAASGLIAGINAARAAQGQEGVVFPQ-ESAIGSM 383 >gi|324992898|gb|EGC24818.1| tRNA:M(5)U-54 methyltransferase [Streptococcus sanguinis SK405] gi|327460351|gb|EGF06688.1| tRNA:M(5)U-54 methyltransferase [Streptococcus sanguinis SK1057] Length = 444 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 110/422 (26%), Positives = 162/422 (38%), Gaps = 72/422 (17%) Query: 10 VIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGLGKGHLVR 60 VIG G AG EAA AK G L HKTS + C+ ++ G Sbjct: 8 VIGAGLAGSEAAYQIAKRGIPVKLYEMRGVKSTPQHKTSDFAELVCSNSLRG-------- 59 Query: 61 EIDALDGLMGRVADAAGIQFRVLN---VKKGPAVRGPRTQADRELYRLAMQREILSQENL 117 DAL +G + + + R L+ +K A R P A LA+ RE SQ Sbjct: 60 --DALTNAVGLLKE----EMRRLDSVILKSAEATRVPAGGA------LAVDREGFSQMVT 107 Query: 118 DVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 +++ T +I I + + + V+ TG V+ KI A GD Sbjct: 108 ELV--------TNHPLIEVIREEITEIPEDAITVIATGPLTSDVL---AEKIHALNGGDG 156 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTII----WDKTEKQFADERLIPFSFMT--D 231 F +D + T +D + +DK E + + + FM D Sbjct: 157 --------FYFYDAAAPIIDVNT---IDMTKVYLKSRYDKGEAAYLNAPMTKQEFMDFHD 205 Query: 232 KITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKS--YGPRYCPSIEDKIVRFGERN 289 + N + E + + E + + + IK+ YGP +E G R+ Sbjct: 206 ALVNAE-EAPLN--SFEKEKYFEGCMPIEVMAKRGIKTMLYGPMKPVGLEYPDDYQGPRD 262 Query: 290 GHQ------IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEY 343 G + L + + G T L Q + + IPGLE +R G Sbjct: 263 GEYKTPYAVVQLRQDNAAGSLYNIVGFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRN 322 Query: 344 DYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFS 402 Y++ P L T +KK LF AGQ+ G GY E+AA GLVAGIN+AR + + F Sbjct: 323 SYMDSPNLLEQTFRSKKQPNLFFAGQMTGVEGYVESAASGLVAGINAARLFKGEEALVFP 382 Query: 403 RT 404 T Sbjct: 383 ET 384 >gi|238855697|ref|ZP_04645994.1| tRNA:M(5)U-54 methyltransferase [Lactobacillus jensenii 269-3] gi|260664452|ref|ZP_05865304.1| tRNA:m(5)U-54 methyltransferase [Lactobacillus jensenii SJ-7A-US] gi|282932211|ref|ZP_06337658.1| tRNA:M(5)U-54 methyltransferase [Lactobacillus jensenii 208-1] gi|238831682|gb|EEQ24022.1| tRNA:M(5)U-54 methyltransferase [Lactobacillus jensenii 269-3] gi|260561517|gb|EEX27489.1| tRNA:m(5)U-54 methyltransferase [Lactobacillus jensenii SJ-7A-US] gi|281303661|gb|EFA95816.1| tRNA:M(5)U-54 methyltransferase [Lactobacillus jensenii 208-1] Length = 439 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 42/110 (38%), Positives = 59/110 (53%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE +R G Y+ +P L T E KK +GLF AG Sbjct: 279 GFQTHLKYGEQKRVFSMIPGLENARFVRYGKMHRNTYMASPDVLNATYEAKKQAGLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+A GLVAGIN++R + D + F ++ +G M + +T+ Sbjct: 339 QMTGVEGYVESAGSGLVAGINASRLAQGKDLVTFP-VETALGSMANYITT 387 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 39/136 (28%), Positives = 55/136 (40%), Gaps = 25/136 (18%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGL----G 54 V VIGGG AG EA+ AK G L H+T + + C ++ Sbjct: 5 VTVIGGGLAGSEASYQLAKRGVEVHLYEMRPVKMTPAHETGNLAELVCTNSMRSDQLTNA 64 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L E+ LD L+ R ADA + PA G DREL+ + E+ Sbjct: 65 VGLLKEEMRRLDSLVLRAADATKV----------PA--GGALAVDRELFSKYITEELAKF 112 Query: 115 ENLDVIQGEVAGFNTE 130 +NL + E+ +E Sbjct: 113 DNLHIHHEEITKIPSE 128 >gi|70726664|ref|YP_253578.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus haemolyticus JCSC1435] gi|81170604|sp|Q4L5V3|TRMFO_STAHJ RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|68447388|dbj|BAE04972.1| glucose-inhibited division protein [Staphylococcus haemolyticus JCSC1435] Length = 435 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 122/499 (24%), Positives = 195/499 (39%), Gaps = 87/499 (17%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGL-- 53 S V ++G G AG EAA A+ G LI H T + C+ ++ G Sbjct: 2 SQTVNIVGAGLAGSEAAYQLAQRGIKVNLIEMRPVKQTPAHHTDKFAELVCSNSLRGNAL 61 Query: 54 --GKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREI 111 G G L E+ LD L+ AD A + PA G DR + + + Sbjct: 62 TNGVGVLKEEMRRLDSLIISAADKARV----------PA--GGALAVDRHDFSGYITETL 109 Query: 112 LSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHI-GKLKI- 169 + N+ VI E+ II+ T LTT + ++ I GK ++ Sbjct: 110 RNHPNVTVINEEINSIPEGYTIIA-------------TGPLTTENLAKEIVDITGKDQLY 156 Query: 170 ---PAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPF 226 A + + S + ++K +D G + + TE++F Sbjct: 157 FYDAAAPIIEKESIDMDKVYLKSRYDKG----------EAAYLNCPMTEEEF-------- 198 Query: 227 SFMTDKITNRQIECGITRTN-LETHRIIMENIKHSAIYSGDIKS--YGPRYCPSIEDKIV 283 ++ + +E + TN E + + + K+ +GP +ED Sbjct: 199 ----NRFYDAVLEAEVAPTNEFEKEKYFEGCMPFEVMAERGRKTLLFGPMKPVGLEDP-- 252 Query: 284 RFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEY 343 + G+R + L + + G T L Q + IR IPGLE V+I+R G Sbjct: 253 KTGKRPFAVVQLRQDDAAGTLYNIVGFQTHLKWGAQKEVIRLIPGLENVDIVRYGVMHRN 312 Query: 344 DYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFS 402 +IN P L E K + AGQ+ G GY E+AA GLVAGIN A K + F Sbjct: 313 TFINSPDVLNEKYELIKEDRIQFAGQMTGVEGYVESAASGLVAGINLAHKLLDKGEVIFP 372 Query: 403 RTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQK 462 R ++ IG M + S A+ + +P NA+ L P K I +++++ Sbjct: 373 R-ETMIGSMA-------------YYISHAKNEKNFQPMNANFGLLPSLEKR--IKDKKER 416 Query: 463 RFAKYIQEYNFLRSLLKSL 481 A+ + +L + K+L Sbjct: 417 YEAQANRALEYLENYKKTL 435 >gi|293366785|ref|ZP_06613461.1| glucose-inhibited division protein Gid [Staphylococcus epidermidis M23864:W2(grey)] gi|291319086|gb|EFE59456.1| glucose-inhibited division protein Gid [Staphylococcus epidermidis M23864:W2(grey)] Length = 443 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 52/141 (36%), Positives = 67/141 (47%), Gaps = 15/141 (10%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IR IPGLE V+I+R G +IN P L E K L+ AG Sbjct: 286 GFQTHLKWGAQKEVIRLIPGLENVDIVRYGVMHRNTFINSPDVLNEKYELKGHDNLYFAG 345 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 Q+ G GY E+AA GLVAGIN A K + F R ++ IG M + Sbjct: 346 QMTGVEGYVESAASGLVAGINLAHKILDKGEVIFPR-ETMIGSMA-------------YY 391 Query: 428 TSRAEYRISLRPDNADNRLTP 448 S A+ + +P NA+ L P Sbjct: 392 ISHAKNEKNFQPMNANFGLLP 412 >gi|251810682|ref|ZP_04825155.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus epidermidis BCM-HMP0060] gi|251805842|gb|EES58499.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus epidermidis BCM-HMP0060] Length = 443 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 52/141 (36%), Positives = 67/141 (47%), Gaps = 15/141 (10%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IR IPGLE V+I+R G +IN P L E K L+ AG Sbjct: 286 GFQTHLKWGAQKEVIRLIPGLENVDIVRYGVMHRNTFINSPDVLNEKYELKGHDNLYFAG 345 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 Q+ G GY E+AA GLVAGIN A K + F R ++ IG M + Sbjct: 346 QMTGVEGYVESAASGLVAGINLAHKILDKGEVIFPR-ETMIGSMA-------------YY 391 Query: 428 TSRAEYRISLRPDNADNRLTP 448 S A+ + +P NA+ L P Sbjct: 392 ISHAKNEKNFQPMNANFGLLP 412 >gi|121533771|ref|ZP_01665598.1| gid protein [Thermosinus carboxydivorans Nor1] gi|121307762|gb|EAX48677.1| gid protein [Thermosinus carboxydivorans Nor1] Length = 439 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 47/146 (32%), Positives = 68/146 (46%), Gaps = 13/146 (8%) Query: 265 GDIKSYGPRY--CPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQF 322 G +K G R+ I +V+ + NG G T + +P Q + Sbjct: 242 GPMKPVGLRHPVTGEIPYAVVQLRQDNGAATLYNIVGFQTHLKWPE----------QKRV 291 Query: 323 IRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQ 381 R IPGLE +R G +IN PK L PTL+ + + AGQI G GY E+AA Sbjct: 292 FRLIPGLENAEFVRYGVMHRNTFINSPKVLKPTLQMQNNPAILFAGQITGVEGYVESAAC 351 Query: 382 GLVAGINSARKSNKLDCICFSRTDSY 407 G+VAGIN+AR + + + F ++ Sbjct: 352 GIVAGINAARLARGQEPLVFPEDTAH 377 >gi|167951231|ref|ZP_02538305.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 144 Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats. Identities = 32/55 (58%), Positives = 40/55 (72%) Query: 412 IDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAK 466 +DDL ++G EPYRMFTSRAEYR+ LR DNAD RLT G KLG + + R F++ Sbjct: 1 MDDLITRGTSEPYRMFTSRAEYRLLLREDNADLRLTEQGRKLGLVDDHRWATFSR 55 >gi|319401459|gb|EFV89669.1| tRNA:m(5)U-54 methyltransferase [Staphylococcus epidermidis FRI909] Length = 435 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 52/141 (36%), Positives = 67/141 (47%), Gaps = 15/141 (10%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IR IPGLE V+I+R G +IN P L E K L+ AG Sbjct: 278 GFQTHLKWGAQKEVIRLIPGLENVDIVRYGVMHRNTFINSPDVLNEKYELKGHDNLYFAG 337 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 Q+ G GY E+AA GLVAGIN A K + F R ++ IG M + Sbjct: 338 QMTGVEGYVESAASGLVAGINLAHKILGKGEVIFPR-ETMIGSMA-------------FY 383 Query: 428 TSRAEYRISLRPDNADNRLTP 448 S A+ + +P NA+ L P Sbjct: 384 ISHAKNEKNFQPMNANFGLLP 404 >gi|325687463|gb|EGD29484.1| tRNA:M(5)U-54 methyltransferase [Streptococcus sanguinis SK72] Length = 444 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 110/422 (26%), Positives = 162/422 (38%), Gaps = 72/422 (17%) Query: 10 VIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGLGKGHLVR 60 VIG G AG EAA AK G S L HKTS + C+ ++ G Sbjct: 8 VIGAGLAGSEAAYQIAKRGISVKLYEMRGVKSTPQHKTSDFAELVCSNSLRG-------- 59 Query: 61 EIDALDGLMGRVADAAGIQFRVLN---VKKGPAVRGPRTQADRELYRLAMQREILSQENL 117 DAL +G + + + R L+ +K A R P A LA+ RE SQ Sbjct: 60 --DALTNAVGLLKE----EMRRLDSVILKSAEATRVPAGGA------LAVDREGFSQLVT 107 Query: 118 DVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 +++ T +I I + + + V+ TG + KI A GD Sbjct: 108 ELV--------TNHPLIEVIREEITEIPEDAITVIATGPLTSDAL---AEKIHALNGGDG 156 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTII----WDKTEKQFADERLIPFSFMT--D 231 F +D + T +D + +DK E + + + FM D Sbjct: 157 --------FYFYDAAAPIIDVNT---IDMTKVYLKSRYDKGEAAYLNAPMTKQEFMDFHD 205 Query: 232 KITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKS--YGPRYCPSIEDKIVRFGERN 289 + N + E + + E + + + IK+ YGP +E G R+ Sbjct: 206 ALVNAE-EAPLN--SFEKEKYFEGCMPIEVMAKRGIKTMLYGPMKPVGLEYPDDYQGPRD 262 Query: 290 GHQ------IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEY 343 G + L + + G T L Q + + IPGLE +R G Sbjct: 263 GEYKTPYAVVQLRQDNAAGSLYNIVGFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRN 322 Query: 344 DYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFS 402 Y++ P L T +KK LF AGQ+ G GY E+AA GLVAGIN+AR + + F Sbjct: 323 SYMDSPNLLEQTFRSKKQPNLFFAGQMTGVEGYVESAASGLVAGINAARLFKGEEALVFP 382 Query: 403 RT 404 T Sbjct: 383 ET 384 >gi|317129217|ref|YP_004095499.1| gid protein [Bacillus cellulosilyticus DSM 2522] gi|315474165|gb|ADU30768.1| gid protein [Bacillus cellulosilyticus DSM 2522] Length = 434 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q + I+ IPGLE I+R G +IN P L PT + + LF AG Sbjct: 278 GFQTHMKWGPQKEVIQLIPGLENAEIVRFGVMHRNTFINSPNLLKPTYQYRDRDDLFFAG 337 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+AA GLVAGIN++R + + + F ++ IG M +T+ Sbjct: 338 QMTGVEGYVESAAAGLVAGINASRLIQEKETVTFP-NETVIGSMAQYITT 386 >gi|282876317|ref|ZP_06285184.1| tRNA:M(5)U-54 methyltransferase [Staphylococcus epidermidis SK135] gi|281295342|gb|EFA87869.1| tRNA:M(5)U-54 methyltransferase [Staphylococcus epidermidis SK135] Length = 435 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 52/141 (36%), Positives = 67/141 (47%), Gaps = 15/141 (10%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IR IPGLE V+I+R G +IN P L E K L+ AG Sbjct: 278 GFQTHLKWGAQKEVIRLIPGLENVDIVRYGVMHRNTFINSPDVLNEKYELKGHDNLYFAG 337 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 Q+ G GY E+AA GLVAGIN A K + F R ++ IG M + Sbjct: 338 QMTGVEGYVESAASGLVAGINLAHKILDKGEVIFPR-ETMIGSMA-------------YY 383 Query: 428 TSRAEYRISLRPDNADNRLTP 448 S A+ + +P NA+ L P Sbjct: 384 ISHAKNEKNFQPMNANFGLLP 404 >gi|329724333|gb|EGG60845.1| tRNA:m(5)U-54 methyltransferase [Staphylococcus epidermidis VCU144] Length = 435 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 52/141 (36%), Positives = 67/141 (47%), Gaps = 15/141 (10%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IR IPGLE V+I+R G +IN P L E K L+ AG Sbjct: 278 GFQTHLKWGAQKEVIRLIPGLENVDIVRYGVMHRNTFINSPDVLNEKYELKGHDNLYFAG 337 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 Q+ G GY E+AA GLVAGIN A K + F R ++ IG M + Sbjct: 338 QMTGVEGYVESAASGLVAGINLAHKILDKGEVIFPR-ETMIGSMA-------------YY 383 Query: 428 TSRAEYRISLRPDNADNRLTP 448 S A+ + +P NA+ L P Sbjct: 384 ISHAKNEKNFQPMNANFGLLP 404 >gi|327462204|gb|EGF08531.1| tRNA:M(5)U-54 methyltransferase [Streptococcus sanguinis SK1] gi|327474224|gb|EGF19631.1| tRNA:M(5)U-54 methyltransferase [Streptococcus sanguinis SK408] gi|327489691|gb|EGF21482.1| tRNA:M(5)U-54 methyltransferase [Streptococcus sanguinis SK1058] Length = 444 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 109/422 (25%), Positives = 162/422 (38%), Gaps = 72/422 (17%) Query: 10 VIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGLGKGHLVR 60 VIG G AG EAA AK G L HKTS + C+ ++ G Sbjct: 8 VIGAGLAGSEAAYQIAKRGIPVKLYEMRGVKSTPQHKTSDFAELVCSNSLRG-------- 59 Query: 61 EIDALDGLMGRVADAAGIQFRVLN---VKKGPAVRGPRTQADRELYRLAMQREILSQENL 117 DAL +G + + + R L+ +K A R P A LA+ RE SQ Sbjct: 60 --DALTNAVGLLKE----EMRRLDSVILKSAEATRVPAGGA------LAVDREGFSQLVT 107 Query: 118 DVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 +++ T +I I + + + V+ TG + KI A GD Sbjct: 108 ELV--------TNHPLIEVIREEITEIPEDAITVIATGPLTSDAL---AEKIHALNGGDG 156 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTII----WDKTEKQFADERLIPFSFMT--D 231 F +D + T +D + +DK E + + + FM D Sbjct: 157 --------FYFYDAAAPIIDVNT---IDMSKVYLKSRYDKGEAAYLNAPMTKQEFMNFHD 205 Query: 232 KITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKS--YGPRYCPSIEDKIVRFGERN 289 + N + E + + E + + + IK+ YGP +E G R+ Sbjct: 206 ALVNAE-EAPLN--SFEKEKYFEGCMPIEVMAKRGIKTMLYGPMKPVGLEYPDDYQGPRD 262 Query: 290 GH------QIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEY 343 G + L + + G T L Q + + IPGLE +R G Sbjct: 263 GDFKTPYAVVQLRQDNAAGSLYNIVGFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRN 322 Query: 344 DYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFS 402 Y++ P L T +KK+ LF AGQ+ G GY E+AA GLVAGIN+AR + + F Sbjct: 323 SYMDSPNLLEQTFRSKKLPNLFFAGQMTGVEGYVESAASGLVAGINAARLFKGEEALVFP 382 Query: 403 RT 404 T Sbjct: 383 ET 384 >gi|229918619|ref|YP_002887265.1| tRNA (uracil-5-)-methyltransferase Gid [Exiguobacterium sp. AT1b] gi|259547948|sp|C4L614|TRMFO_EXISA RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|229470048|gb|ACQ71820.1| gid protein [Exiguobacterium sp. AT1b] Length = 436 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 55/174 (31%), Positives = 85/174 (48%), Gaps = 24/174 (13%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IR IPGLE +I+R G +IN P L PT + + LF AG Sbjct: 279 GFQTHLKWGEQKRIIRLIPGLENADIVRYGVMHRNTFINSPSLLKPTYQARTRDTLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 Q+ G GY E+AA GL+AGIN+A+ + + R ++ +G M +T Sbjct: 339 QMTGVEGYVESAASGLLAGINAAKMIAGEELVVLPR-ETMLGSMAHYIT----------- 386 Query: 428 TSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKY-------IQEYNFL 474 T+ ++ +P NA+ L P ++ ++Q+R+ +Y IQ+Y L Sbjct: 387 TADGKH---FQPMNANFGLVP-SLEDAPKKMKKQERYERYANRALETIQQYKDL 436 >gi|27467845|ref|NP_764482.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus epidermidis ATCC 12228] gi|57866717|ref|YP_188399.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus epidermidis RP62A] gi|33301130|sp|Q8CPH2|TRMFO_STAES RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|81170603|sp|Q5HPU1|TRMFO_STAEQ RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|27315390|gb|AAO04524.1|AE016747_21 glucose-inhibited division protein gid [Staphylococcus epidermidis ATCC 12228] gi|57637375|gb|AAW54163.1| gid protein [Staphylococcus epidermidis RP62A] gi|329736365|gb|EGG72637.1| tRNA:m(5)U-54 methyltransferase [Staphylococcus epidermidis VCU028] gi|329736552|gb|EGG72818.1| tRNA:m(5)U-54 methyltransferase [Staphylococcus epidermidis VCU045] Length = 435 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 52/141 (36%), Positives = 67/141 (47%), Gaps = 15/141 (10%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IR IPGLE V+I+R G +IN P L E K L+ AG Sbjct: 278 GFQTHLKWGAQKEVIRLIPGLENVDIVRYGVMHRNTFINSPDVLNEKYELKGHDNLYFAG 337 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 Q+ G GY E+AA GLVAGIN A K + F R ++ IG M + Sbjct: 338 QMTGVEGYVESAASGLVAGINLAHKILDKGEVIFPR-ETMIGSMA-------------YY 383 Query: 428 TSRAEYRISLRPDNADNRLTP 448 S A+ + +P NA+ L P Sbjct: 384 ISHAKNEKNFQPMNANFGLLP 404 >gi|242242533|ref|ZP_04796978.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus epidermidis W23144] gi|242233960|gb|EES36272.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus epidermidis W23144] Length = 443 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 118/472 (25%), Positives = 176/472 (37%), Gaps = 103/472 (21%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGLG---- 54 V V+G G AG EAA A+ G LI H T + C+ ++ G Sbjct: 13 VNVVGAGLAGSEAAYQLAQRGIKVNLIEMRPVKQTPAHHTDKFAELVCSNSLRGNALTNA 72 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L E+ LD L+ AD A + PA G DR + + + + Sbjct: 73 VGVLKEEMRHLDSLIITSADKARV----------PA--GGALAVDRHDFAGYITDTLRNH 120 Query: 115 ENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHI-GKLKI---- 169 N+ V+ EV II+ T LTT + ++ I GK ++ Sbjct: 121 PNITVLNEEVNHIPEGYTIIA-------------TGPLTTEHLAQEIVDITGKDQLYFYD 167 Query: 170 PAGRMGDSPSNSLFNSFMKFDFDTGR------------LKTGTPARLDGKTIIWDKTEKQ 217 A + + S ++ ++K +D G A L+ + ++ EK+ Sbjct: 168 AAAPIIEKDSINMDKVYLKSRYDKGEAAYLNCPMTEEEFNRFYDAVLEAEVATVNEFEKE 227 Query: 218 FADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPS 277 E +PF M ++ R L +GP Sbjct: 228 KYFEGCMPFEVMAER----------GRKTL---------------------LFGPMKPVG 256 Query: 278 IEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRP 337 +ED + G+R + L + + G T L Q + IR IPGLE V+I+R Sbjct: 257 LEDP--KTGKRPYAVVQLRQDDAAGTLYNIVGFQTHLKWGAQKEVIRLIPGLENVDIVRY 314 Query: 338 GYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKL 396 G +IN P L E K L+ AGQ+ G GY E+AA GLVAGIN A K Sbjct: 315 GVMHRNTFINSPDVLNEKYELKGHDNLYFAGQMTGVEGYVESAASGLVAGINLAHKILGK 374 Query: 397 DCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTP 448 + F R ++ IG M + S A+ + +P NA+ L P Sbjct: 375 GEVIFPR-ETMIGSMA-------------YYISHAKNEKNFQPMNANFGLLP 412 >gi|145631885|ref|ZP_01787642.1| glucose-inhibited division protein A [Haemophilus influenzae R3021] gi|144982488|gb|EDJ90051.1| glucose-inhibited division protein A [Haemophilus influenzae R3021] Length = 132 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 38/112 (33%), Positives = 63/112 (56%), Gaps = 1/112 (0%) Query: 506 EFLSYPDFSIQNLFSICPDARKFSSL-VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLI 564 + L P+ + L S+ P +E+++I Y Y Q E ++ K E I Sbjct: 14 DLLRRPEMTYDILTSLTPYKPAMEDREAVEQVEIAIKYQGYIEHQQEEIEKQKRHENTAI 73 Query: 565 PKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKN 616 P +FDYS + LSNE++ KL +P ++ QAS+I G+TPAA++++L+ +KK Sbjct: 74 PANFDYSKVSGLSNEVRAKLEQHRPVSIGQASRISGITPAAISIILVNLKKQ 125 >gi|133723117|gb|ABO37805.1| GidA [Lactococcus garvieae] Length = 160 Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 42/104 (40%), Positives = 57/104 (54%), Gaps = 2/104 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +++K LF AG Sbjct: 3 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLKQTFQSRKQENLFFAG 62 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 Q+ G GY E+AA GLVAGIN+AR N + I F +T + IG + Sbjct: 63 QMTGVEGYVESAASGLVAGINAARLFNGEEEIIFPQTTA-IGAL 105 >gi|328467376|gb|EGF38454.1| tRNA (uracil-5-)-methyltransferase Gid [Lactobacillus helveticus MTCC 5463] Length = 438 Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 54/157 (34%), Positives = 77/157 (49%), Gaps = 18/157 (11%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE +R G Y+ +P L + E KK GLF AG Sbjct: 279 GFQTHLKYGEQKRVFSMIPGLENARFVRYGKMHRNTYMASPDVLTASYEAKKRPGLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 Q+ G GY E+A GLVAG+N+AR++ + I F + D+ +G M + +T Sbjct: 339 QMTGVEGYVESAGSGLVAGVNAAREALGEEPIAFPK-DTALGSMANYVT----------- 386 Query: 428 TSRAEYRISLRPDNADNRLTPI--GMKLGCIGERRQK 462 T+ A++ +P NA L P G K+ ER +K Sbjct: 387 TASAKH---FQPMNASFALLPAWEGKKIRKKRERHEK 420 >gi|167630280|ref|YP_001680779.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Heliobacterium modesticaldum Ice1] gi|205830337|sp|B0TH93|TRMFO_HELMI RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|167593020|gb|ABZ84768.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Heliobacterium modesticaldum Ice1] Length = 439 Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 38/84 (45%), Positives = 48/84 (57%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE+ +R G +IN P L PT + +K +F AG Sbjct: 277 GFQTHLKWPEQKRVFRMIPGLEQAEFVRYGVMHRNTFINSPTLLLPTYQLRKDPSVFFAG 336 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 QI G GY E+AA GLVAG+N+AR Sbjct: 337 QITGVEGYVESAAAGLVAGLNAAR 360 >gi|301066448|ref|YP_003788471.1| tRNA uridine 5-carboxymethylaminomethyl modification FAD-utilizing enzyme [Lactobacillus casei str. Zhang] gi|300438855|gb|ADK18621.1| tRNA uridine 5-carboxymethylaminomethyl modification FAD-utilizing enzyme [Lactobacillus casei str. Zhang] Length = 439 Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 53/156 (33%), Positives = 76/156 (48%), Gaps = 17/156 (10%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE V I+R G ++ +P L PT +K+ LF AG Sbjct: 277 GFQTHLKWGEQKRVFRLIPGLENVQIVRYGVMHRNTFMKSPVVLEPTYASKRRPDLFFAG 336 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 Q+ G GY E+AA GL+AGIN+AR + + F T T+ G + Y Sbjct: 337 QMTGVEGYVESAASGLIAGINAARMALGETPLIFPET-----------TAMGSMAHYITH 385 Query: 428 TSRAEYRISLRPDNADNRLTP-IGMKLGCIGERRQK 462 TS + +P NA+ + P + +K+ ER Q+ Sbjct: 386 TSAHHF----QPMNANFGIMPALTVKIRNKKERNQQ 417 >gi|260101614|ref|ZP_05751851.1| glucose-inhibited division protein [Lactobacillus helveticus DSM 20075] gi|260084577|gb|EEW68697.1| glucose-inhibited division protein [Lactobacillus helveticus DSM 20075] Length = 438 Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 54/157 (34%), Positives = 77/157 (49%), Gaps = 18/157 (11%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE +R G Y+ +P L + E KK GLF AG Sbjct: 279 GFQTHLKYGEQKRVFSMIPGLENARFVRYGKMHRNTYMASPDVLTASYEAKKRPGLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 Q+ G GY E+A GLVAG+N+AR++ + I F + D+ +G M + +T Sbjct: 339 QMTGVEGYVESAGSGLVAGVNAAREALGEEPIAFPK-DTALGSMANYVT----------- 386 Query: 428 TSRAEYRISLRPDNADNRLTPI--GMKLGCIGERRQK 462 T+ A++ +P NA L P G K+ ER +K Sbjct: 387 TTSAKH---FQPMNASFALLPAWEGKKIRKKRERHEK 420 >gi|257082470|ref|ZP_05576831.1| tRNA (uracil-5-)-methyltransferase Gid [Enterococcus faecalis E1Sol] gi|256990500|gb|EEU77802.1| tRNA (uracil-5-)-methyltransferase Gid [Enterococcus faecalis E1Sol] Length = 435 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 50/143 (34%), Positives = 71/143 (49%), Gaps = 4/143 (2%) Query: 270 YGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGL 329 +GP +ED + G+R I L + + G T L Q + R IPGL Sbjct: 241 FGPMKPVGLEDP--KTGKRPYAVIQLRQDNAAASLYNIVGFQTHLKWGEQKRVFRMIPGL 298 Query: 330 EKVNIIRPGYAIEYDYINPKELF-PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGIN 388 E +R G ++N EL PT ++ K LF AGQ+ G GY E+AA GL+AGIN Sbjct: 299 ENAEFVRYGVMHRNSFMNSPELLKPTYQSIKRDDLFFAGQMTGVEGYVESAASGLLAGIN 358 Query: 389 SARKSNKLDCICFSRTDSYIGVM 411 +AR + + I F R ++ +G M Sbjct: 359 AARLAKGEEPIEFPR-ETTLGSM 380 >gi|323489571|ref|ZP_08094798.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gid [Planococcus donghaensis MPA1U2] gi|323396702|gb|EGA89521.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gid [Planococcus donghaensis MPA1U2] Length = 436 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 49/149 (32%), Positives = 75/149 (50%), Gaps = 4/149 (2%) Query: 269 SYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPG 328 ++GP +ED + GER + L + + G T L Q + ++ IPG Sbjct: 240 TFGPMKPVGLEDP--KTGERPYAVVQLRQDDAAGTLYNIVGFQTHLKWGPQKEVLKLIPG 297 Query: 329 LEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGI 387 LE V I+R G +IN P+ L PT + K +F AGQ+ G GY E+A GL+AGI Sbjct: 298 LENVEIVRYGVMHRNTFINSPRVLKPTYQLKADDNIFFAGQMTGVEGYVESAGSGLLAGI 357 Query: 388 NSARKSNKLDCICFSRTDSYIGVMIDDLT 416 N+A+ + D + F ++ +G M +T Sbjct: 358 NAAKLALGEDLLVFP-AETALGSMARYIT 385 >gi|325696508|gb|EGD38398.1| tRNA:M(5)U-54 methyltransferase [Streptococcus sanguinis SK160] Length = 444 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 110/422 (26%), Positives = 162/422 (38%), Gaps = 72/422 (17%) Query: 10 VIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGLGKGHLVR 60 VIG G AG EAA AK G L HKTS + C+ ++ G Sbjct: 8 VIGAGLAGSEAAYQIAKRGIPVKLYEMRGVKSTPQHKTSDFAELVCSNSLRG-------- 59 Query: 61 EIDALDGLMGRVADAAGIQFRVLN---VKKGPAVRGPRTQADRELYRLAMQREILSQENL 117 DAL +G + + + R L+ +K A R P A LA+ RE SQ Sbjct: 60 --DALTNAVGLLKE----EMRRLDSVILKSAEATRVPAGGA------LAVDREGFSQIVT 107 Query: 118 DVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 +++ T +I I + + + V+ TG V+ KI A GD Sbjct: 108 ELV--------TNHPLIEVIREEITEIPEDAITVIATGPLTSDVL---AEKIHALNGGDG 156 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTII----WDKTEKQFADERLIPFSFMT--D 231 F +D + T +D + +DK E + + + FM D Sbjct: 157 --------FYFYDAAAPIIDVNT---IDMTKVYLKSRYDKGEAAYLNAPMTKQEFMDFHD 205 Query: 232 KITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKS--YGPRYCPSIEDKIVRFGERN 289 + N + E + + E + + + IK+ YGP +E G R+ Sbjct: 206 ALVNAE-EAPLN--SFEKEKYFEGCMPIEVMAKRGIKTMLYGPMKPVGLEYPDDYQGPRD 262 Query: 290 GHQ------IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEY 343 G + L + + G T L Q + + IPGLE +R G Sbjct: 263 GEYKTPYAVVQLRQDNAAGSLYNIVGFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRN 322 Query: 344 DYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFS 402 Y++ P L T +KK LF AGQ+ G GY E+AA GLVAGIN+AR + + F Sbjct: 323 SYMDSPNLLEQTFRSKKQPNLFFAGQMTGVEGYVESAASGLVAGINAARLFKGEEALVFP 382 Query: 403 RT 404 T Sbjct: 383 ET 384 >gi|315222964|ref|ZP_07864843.1| tRNA:M(5)U-54 methyltransferase [Streptococcus anginosus F0211] gi|315187914|gb|EFU21650.1| tRNA:M(5)U-54 methyltransferase [Streptococcus anginosus F0211] Length = 455 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/94 (41%), Positives = 51/94 (54%), Gaps = 1/94 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE +R G Y++ P L T ++KK +F AG Sbjct: 299 GFQTHLKWGEQKRVFRMIPGLENAEFVRYGVMHRNSYMDSPNLLTQTFQSKKQENIFFAG 358 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICF 401 Q+ G GY E+AA GLVAGIN+AR N + + F Sbjct: 359 QMTGVEGYVESAASGLVAGINAARLFNGEEALVF 392 >gi|319745032|gb|EFV97360.1| tRNA:M(5)U-54 methyltransferase [Streptococcus agalactiae ATCC 13813] Length = 444 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 43/109 (39%), Positives = 58/109 (53%), Gaps = 2/109 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T T+K LF AG Sbjct: 288 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLNQTFATRKNPNLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 Q+ G GY E+AA GLVAGIN+AR+ N + F +T + IG + +T Sbjct: 348 QMTGVEGYVESAASGLVAGINAARRFNGESEVVFPQTTA-IGALPHYIT 395 >gi|323466641|gb|ADX70328.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO [Lactobacillus helveticus H10] Length = 438 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE +R G Y+ +P L + E KK GLF AG Sbjct: 279 GFQTHLKYGEQKRVFSMIPGLENARFVRYGKMHRNTYMASPDVLTASYEAKKRPGLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+A GLVAG+N+AR++ + I F + D+ +G M + +T+ Sbjct: 339 QMTGVEGYVESAGSGLVAGVNAAREALGEEPIAFPK-DTALGSMANYVTT 387 >gi|125718004|ref|YP_001035137.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus sanguinis SK36] gi|166989571|sp|A3CN32|TRMFO_STRSV RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|125497921|gb|ABN44587.1| Gid-like protein, putative [Streptococcus sanguinis SK36] Length = 444 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 108/422 (25%), Positives = 162/422 (38%), Gaps = 72/422 (17%) Query: 10 VIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGLGKGHLVR 60 VIG G AG EAA AK G L HKT+ + C+ ++ G Sbjct: 8 VIGAGLAGSEAAYQIAKRGIPVKLYEMRGVKSTPQHKTADFAELVCSNSLRG-------- 59 Query: 61 EIDALDGLMGRVADAAGIQFRVLN---VKKGPAVRGPRTQADRELYRLAMQREILSQENL 117 DAL +G + + + R L+ +K A R P A LA+ RE SQ Sbjct: 60 --DALTNAVGLLKE----EMRRLDSVILKSAEATRVPAGGA------LAVDREGFSQMVT 107 Query: 118 DVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 +++ T +I I + + + V+ TG + KI A GD Sbjct: 108 ELV--------TNHPLIEVIREEITEIPEDAITVIATGPLTSDAL---AEKIHALNGGDG 156 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTII----WDKTEKQFADERLIPFSFMT--D 231 F +D + T +D + +DK E + + + FM D Sbjct: 157 --------FYFYDAAAPIIDVNT---IDMTKVYLKSRYDKGEAAYLNAPMTKQEFMDFHD 205 Query: 232 KITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKS--YGPRYCPSIEDKIVRFGERN 289 + N + E + + E + + + IK+ YGP +E G R+ Sbjct: 206 ALVNAE-EAPLN--SFEKEKYFEGCMPIEVMAKRGIKTMLYGPMKPVGLEYPDDYQGPRD 262 Query: 290 GHQ------IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEY 343 G + L + + G T L Q + + IPGLE +R G Sbjct: 263 GEYKTPYAVVQLRQDNAAGSLYNIVGFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRN 322 Query: 344 DYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFS 402 Y++ P L T +KK+ LF AGQ+ G GY E+AA GLVAGIN+AR + + F Sbjct: 323 SYMDSPNLLEQTFRSKKLPNLFFAGQMTGVEGYVESAASGLVAGINAARLFKGEEALVFP 382 Query: 403 RT 404 T Sbjct: 383 ET 384 >gi|161507473|ref|YP_001577427.1| tRNA (uracil-5-)-methyltransferase Gid [Lactobacillus helveticus DPC 4571] gi|205830338|sp|A8YV48|TRMFO_LACH4 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|160348462|gb|ABX27136.1| Glucose-inhibited division protein A [Lactobacillus helveticus DPC 4571] Length = 407 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE +R G Y+ +P L + E KK GLF AG Sbjct: 279 GFQTHLKYGEQKRVFSMIPGLENARFVRYGKMHRNTYMASPDVLTASYEAKKRPGLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+A GLVAG+N+AR++ + I F + D+ +G M + +T+ Sbjct: 339 QMTGVEGYVESAGSGLVAGVNAAREALGEEPIAFPK-DTALGSMANYVTT 387 >gi|25011009|ref|NP_735404.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus agalactiae NEM316] gi|77413619|ref|ZP_00789805.1| gid protein [Streptococcus agalactiae 515] gi|33301134|sp|Q8E5M6|TRMFO_STRA3 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|23095409|emb|CAD46614.1| Unknown [Streptococcus agalactiae NEM316] gi|77160328|gb|EAO71453.1| gid protein [Streptococcus agalactiae 515] Length = 444 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 43/109 (39%), Positives = 58/109 (53%), Gaps = 2/109 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T T+K LF AG Sbjct: 288 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLDQTFATRKNPNLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 Q+ G GY E+AA GLVAGIN+AR+ N + F +T + IG + +T Sbjct: 348 QMTGVEGYVESAASGLVAGINAARRFNGESEVVFPQTTA-IGALPHYIT 395 >gi|325694499|gb|EGD36408.1| tRNA:M(5)U-54 methyltransferase [Streptococcus sanguinis SK150] Length = 444 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 110/422 (26%), Positives = 161/422 (38%), Gaps = 72/422 (17%) Query: 10 VIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGLGKGHLVR 60 VIG G AG EAA AK G L HKTS + C+ ++ G Sbjct: 8 VIGAGLAGSEAAYQIAKRGIPVKLYEMRGVKSTPQHKTSDFAELVCSNSLRG-------- 59 Query: 61 EIDALDGLMGRVADAAGIQFRVLN---VKKGPAVRGPRTQADRELYRLAMQREILSQENL 117 DAL +G + + + R L+ +K A R P A LA+ RE SQ Sbjct: 60 --DALTNAVGLLKE----EMRRLDSVILKSAEATRVPAGGA------LAVDREGFSQLVT 107 Query: 118 DVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 D++ T +I I + + + V+ TG + KI A GD Sbjct: 108 DLV--------TNHPLIEVIREEITEIPEDAITVIATGPLTSDTL---AEKIHALNGGDG 156 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTII----WDKTEKQFADERLIPFSFMT--D 231 F +D + T +D + +DK E + + + FM D Sbjct: 157 --------FYFYDAAAPIIDVNT---IDMTKVYLKSRYDKGEAAYLNAPMTKQEFMDFHD 205 Query: 232 KITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKS--YGPRYCPSIEDKIVRFGERN 289 + N + E + + E + + + IK+ YGP +E G R+ Sbjct: 206 ALVNAE-EAPLN--SFEKEKYFEGCMPIEVMAKRGIKTMLYGPMKPVGLEYPDDYQGPRD 262 Query: 290 GH------QIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEY 343 G + L + + G T L Q + + IPGLE +R G Sbjct: 263 GDFKTPYAVVQLRQDNAAGSLYNIVGFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRN 322 Query: 344 DYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFS 402 Y++ P L T +KK LF AGQ+ G GY E+AA GLVAGIN+AR + + F Sbjct: 323 SYMDSPNLLEQTFRSKKQPNLFFAGQMTGVEGYVESAASGLVAGINAARLFKGEEALVFP 382 Query: 403 RT 404 T Sbjct: 383 ET 384 >gi|319939101|ref|ZP_08013465.1| methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase trmFO [Streptococcus anginosus 1_2_62CV] gi|319812151|gb|EFW08417.1| methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase trmFO [Streptococcus anginosus 1_2_62CV] Length = 444 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/97 (40%), Positives = 51/97 (52%), Gaps = 1/97 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE +R G Y++ P L T ++KK +F AG Sbjct: 288 GFQTHLKWGEQKRVFRMIPGLENAEFVRYGVMHRNSYMDSPNLLTQTFQSKKQENIFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 Q+ G GY E+AA GLVAGIN+ R N + + F T Sbjct: 348 QMTGVEGYVESAASGLVAGINATRLFNGEEALVFPET 384 >gi|282901981|ref|ZP_06309879.1| Gid protein [Cylindrospermopsis raciborskii CS-505] gi|281193068|gb|EFA68067.1| Gid protein [Cylindrospermopsis raciborskii CS-505] Length = 452 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 100/406 (24%), Positives = 161/406 (39%), Gaps = 69/406 (16%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTAL---------ITHKTSTIGSMSCNPAIGGLGK--- 55 + VIGGG AG EAA A+ G L H T + + C+ + G + Sbjct: 10 IQVIGGGLAGTEAAWQIAQAGVPVILHEMRPQRFSPAHHTENLAELVCSNSFGAMASDRA 69 Query: 56 -GHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L E+ LD ++ AD + PA G DR + + + + + Sbjct: 70 AGLLHEELRQLDSIVISKADEHAV----------PA--GGALAVDRGKFGEDLTQTLANH 117 Query: 115 ENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRM 174 +D+ +GEV K + + IV+ + + + F G+ ++ + + Sbjct: 118 PLIDLRRGEV------KEVPAGIVVLASGPLTSPQLSADIQQFT-GLEYLNFFDAASPII 170 Query: 175 -GDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI 233 GDS + + +FM +D G + + +++Q+ + Sbjct: 171 VGDSINRDI--AFMASRYDKG----------EAAYLNCPMSKQQY--------------L 204 Query: 234 TNRQIECGITRTNL-----ETHRIIME--NIKHSAIYSGDIKSYGPRYCPSIEDKIVRFG 286 R+ C +T L ET + I+ A D YGP + D+ R G Sbjct: 205 EFREALCQAEQTELKDFERETAKFFEACLPIEEMAQRGEDTMRYGPLKPVGLTDE--RTG 262 Query: 287 ERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI 346 ERN + L E + G T L Q + R IPGLE +R G ++ Sbjct: 263 ERNYAVVQLRQEDKAGQLWNMVGFQTNLRWGEQKRVFRMIPGLENAEFVRLGVMHRNTFL 322 Query: 347 N-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSAR 391 N P+ + PTL+ K+ L AGQ+ GT GY A+A G +AG N+AR Sbjct: 323 NAPQLVLPTLQFKQRHTLLAAGQLIGTEGYTAASAGGWLAGTNAAR 368 >gi|328950840|ref|YP_004368175.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO [Marinithermus hydrothermalis DSM 14884] gi|328451164|gb|AEB12065.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO [Marinithermus hydrothermalis DSM 14884] Length = 442 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 1/89 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + +R IPGLE I+R G Y+N P+ L TLE +K+ +F+AG Sbjct: 278 GFQTGLKWGDQKEIVRLIPGLESAEIVRYGVMHRNTYLNAPRLLHSTLELRKLPRVFVAG 337 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKL 396 + GT GY E+AA G +AG+N+AR L Sbjct: 338 VLAGTEGYLESAATGWLAGVNAARALQGL 366 >gi|169842216|ref|ZP_02875321.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [candidate division TM7 single-cell isolate TM7a] Length = 47 Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 27/45 (60%), Positives = 35/45 (77%) Query: 262 IYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVY 306 +Y+G I S GPRYCPSIEDK+V+F +++ H +FLEPEG T VY Sbjct: 1 MYNGSISSTGPRYCPSIEDKVVKFNDKDSHHLFLEPEGFETAEVY 45 >gi|332799165|ref|YP_004460664.1| methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO [Tepidanaerobacter sp. Re1] gi|332696900|gb|AEE91357.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO [Tepidanaerobacter sp. Re1] Length = 446 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 43/110 (39%), Positives = 60/110 (54%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T+L Q + IPG+ K +R G+ +I +P L PTLE K + GLF AG Sbjct: 277 GFQTSLKWGEQKRVFGLIPGMGKAEFVRYGFIHRNTFIASPLYLKPTLEFKALRGLFFAG 336 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 QI G GY E+AA G+VAGIN R K+ I ++ G +++ +TS Sbjct: 337 QITGVEGYIESAASGIVAGINMKRFIRKVGPIALP-LETMTGALLNFITS 385 >gi|242373542|ref|ZP_04819116.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus epidermidis M23864:W1] gi|242348905|gb|EES40507.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus epidermidis M23864:W1] Length = 436 Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 51/141 (36%), Positives = 67/141 (47%), Gaps = 15/141 (10%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IR IPGLE V+I+R G +IN P L E + L+ AG Sbjct: 279 GFQTHLKWGAQKEVIRLIPGLENVDIVRYGVMHRNTFINSPDVLNEKYELEGHENLYFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 Q+ G GY E+AA GLVAGIN A K + F R ++ IG M + Sbjct: 339 QMTGVEGYVESAASGLVAGINLAHKLAGKGEVIFPR-ETMIGSMA-------------YY 384 Query: 428 TSRAEYRISLRPDNADNRLTP 448 S A+ + +P NA+ L P Sbjct: 385 ISHAKNEKNFQPMNANFGLLP 405 >gi|313901985|ref|ZP_07835401.1| gid protein [Thermaerobacter subterraneus DSM 13965] gi|313467774|gb|EFR63272.1| gid protein [Thermaerobacter subterraneus DSM 13965] Length = 457 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 40/100 (40%), Positives = 54/100 (54%), Gaps = 1/100 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T+L Q + R IPGLE R G +I +PK L PT++ +K LF AG Sbjct: 280 GFQTSLKWGEQKRVFRMIPGLENAEFARYGVMHRNTFICSPKVLKPTMQARKRPDLFFAG 339 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSY 407 QI G GY E+AA G+VAGIN+AR + + F ++ Sbjct: 340 QITGVEGYIESAATGIVAGINAARLVRGEEPVAFPAETAH 379 >gi|152976198|ref|YP_001375715.1| tRNA (uracil-5-)-methyltransferase Gid [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|189040802|sp|A7GRG2|TRMFO_BACCN RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|152024950|gb|ABS22720.1| gid protein [Bacillus cytotoxicus NVH 391-98] Length = 434 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 39/84 (46%), Positives = 49/84 (58%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + ++ IPGLE I+R G +IN PK L PT + K LF AG Sbjct: 279 GFQTHLKWGPQKEVLQLIPGLENAEIVRYGVMHRNTFINSPKLLRPTYQYKHRDDLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GL+AGIN+AR Sbjct: 339 QMTGVEGYVESAASGLLAGINAAR 362 >gi|329667431|gb|AEB93379.1| glucose inhibited division protein A [Lactobacillus johnsonii DPC 6026] Length = 438 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 41/110 (37%), Positives = 61/110 (55%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE +R G YI +P+ L E +K +GLF AG Sbjct: 279 GFQTHLKYGEQKRVFSMIPGLENAKFVRYGKMHRNTYIASPEVLNANYEARKQTGLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+A GLVAGIN+AR++ + + F ++ + +G M + +T+ Sbjct: 339 QMTGVEGYVESAGSGLVAGINAAREALGEETLVFPKSTA-LGSMANYITT 387 >gi|227889897|ref|ZP_04007702.1| tRNA (uracil-5-)-methyltransferase Gid [Lactobacillus johnsonii ATCC 33200] gi|268319572|ref|YP_003293228.1| tRNA:m(5)U-54 methyltransferase [Lactobacillus johnsonii FI9785] gi|227849341|gb|EEJ59427.1| tRNA (uracil-5-)-methyltransferase Gid [Lactobacillus johnsonii ATCC 33200] gi|262397947|emb|CAX66961.1| tRNA:m(5)U-54 methyltransferase [Lactobacillus johnsonii FI9785] Length = 438 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 41/110 (37%), Positives = 61/110 (55%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE +R G YI +P+ L E +K +GLF AG Sbjct: 279 GFQTHLKYGEQKRVFSMIPGLENAKFVRYGKMHRNTYIASPEVLNANYEARKQTGLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+A GLVAGIN+AR++ + + F ++ + +G M + +T+ Sbjct: 339 QMTGVEGYVESAGSGLVAGINAAREALGEETLVFPKSTA-LGSMANYITT 387 >gi|229086385|ref|ZP_04218561.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus Rock3-44] gi|228696901|gb|EEL49710.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus Rock3-44] Length = 434 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 39/84 (46%), Positives = 49/84 (58%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + ++ IPGLE I+R G +IN PK L PT + K LF AG Sbjct: 279 GFQTHLKWGPQKEVLQLIPGLENAEIVRYGVMHRNTFINSPKLLRPTYQYKHRDDLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GL+AGIN+AR Sbjct: 339 QMTGVEGYVESAASGLLAGINAAR 362 >gi|282897627|ref|ZP_06305627.1| Gid protein [Raphidiopsis brookii D9] gi|281197550|gb|EFA72446.1| Gid protein [Raphidiopsis brookii D9] Length = 452 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 102/406 (25%), Positives = 159/406 (39%), Gaps = 69/406 (16%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTAL---------ITHKTSTIGSMSCNPAIGGLGK--- 55 + VIGGG AG EAA A+ G L H T + + C+ + G + Sbjct: 10 IQVIGGGLAGTEAAWQIAQAGVPVILHEMRPQRFSPAHHTENLAELVCSNSFGAMASDRA 69 Query: 56 -GHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L E+ LD ++ AD + PA G DR + + + + + Sbjct: 70 AGLLHEELRQLDSIVISKADEHAV----------PA--GGALAVDRGKFGEDLTQTLANH 117 Query: 115 ENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRM 174 +D+ +GEV K I IV+ + + + F G+ ++ + + Sbjct: 118 PLIDLRRGEV------KEIPGGIVVLASGPLTSPQLSADIQQFT-GLEYLNFFDAASPII 170 Query: 175 -GDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI 233 GDS + + +FM +D G + + +++Q+ + Sbjct: 171 VGDSINRDI--AFMASRYDKG----------EAAYLNCPMSKQQY--------------L 204 Query: 234 TNRQIECGITRTNL-----ETHRIIME--NIKHSAIYSGDIKSYGPRYCPSIEDKIVRFG 286 R+ C +T L ET + I+ A D YGP + D R G Sbjct: 205 EFREALCQAEQTELKDFERETAKFFEACLPIEEMAQRGEDTMRYGPLKPVGLTDG--RTG 262 Query: 287 ERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI 346 ERN + L E + G T L Q + R IPGLE IR G ++ Sbjct: 263 ERNYAVVQLRQEDKAGQLWNMVGFQTNLRWGEQKRVFRMIPGLENAEFIRLGVMHRNTFL 322 Query: 347 N-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSAR 391 N P+ + PTL+ K+ L AGQ+ GT GY A+A G +AG N+AR Sbjct: 323 NAPQLILPTLQFKQRHTLLAAGQLIGTEGYTAASAGGWLAGTNAAR 368 >gi|213420626|ref|ZP_03353692.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 102 Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 47/97 (48%) Query: 113 SQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAG 172 +Q NL + Q V E + + V Q R VVLT GTFL G IHIG G Sbjct: 1 NQPNLMIFQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGG 60 Query: 173 RMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTI 209 R GD PS L + RLKTGTP R+D +TI Sbjct: 61 RAGDPPSIPLSRRLRELPLRVSRLKTGTPPRIDARTI 97 >gi|322385530|ref|ZP_08059174.1| tRNA:M(5)U-54 methyltransferase [Streptococcus cristatus ATCC 51100] gi|321270268|gb|EFX53184.1| tRNA:M(5)U-54 methyltransferase [Streptococcus cristatus ATCC 51100] Length = 444 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 40/97 (41%), Positives = 51/97 (52%), Gaps = 1/97 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +KK LF AG Sbjct: 288 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTFRSKKQPNLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 Q+ G GY E+AA GLVAGIN+AR N + + F T Sbjct: 348 QMTGVEGYVESAASGLVAGINAARLFNGEEALVFPET 384 >gi|295426273|ref|ZP_06818933.1| tRNA:M(5)U-54 methyltransferase [Lactobacillus amylolyticus DSM 11664] gi|295064012|gb|EFG54960.1| tRNA:M(5)U-54 methyltransferase [Lactobacillus amylolyticus DSM 11664] Length = 438 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 42/110 (38%), Positives = 59/110 (53%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE +R G Y+ +P+ L + E K+ GLF AG Sbjct: 279 GFQTHLKYGEQKRVFSLIPGLENARFVRYGKMHRNTYMASPEVLNASYEAKQQKGLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+A GLVAGIN+AR++ D F D+ +G M + +T+ Sbjct: 339 QMTGVEGYVESAGSGLVAGINAAREALGKDTAVFP-VDTALGSMANYVTT 387 >gi|257869683|ref|ZP_05649336.1| tRNA (uracil-5-)-methyltransferase Gid [Enterococcus gallinarum EG2] gi|257803847|gb|EEV32669.1| tRNA (uracil-5-)-methyltransferase Gid [Enterococcus gallinarum EG2] Length = 435 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 49/143 (34%), Positives = 72/143 (50%), Gaps = 4/143 (2%) Query: 270 YGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGL 329 +GP +ED + G+R I L + + G T L Q + R IPGL Sbjct: 240 FGPMKPVGLEDP--KTGKRPYAVIQLRQDNAAASLYNIVGFQTHLKWGEQKRVFRMIPGL 297 Query: 330 EKVNIIRPGYAIEYDYINPKELFP-TLETKKISGLFLAGQINGTTGYEEAAAQGLVAGIN 388 E+ +R G ++N EL T +++K LF AGQ+ G GY E+AA GLVAGIN Sbjct: 298 EQAEFVRYGVMHRNSFMNSPELLQQTYQSRKRDDLFFAGQMTGVEGYVESAASGLVAGIN 357 Query: 389 SARKSNKLDCICFSRTDSYIGVM 411 +A+ + + I F + ++ IG M Sbjct: 358 AAKLAKGEEPIIFPQ-ETTIGSM 379 >gi|251797452|ref|YP_003012183.1| gid protein [Paenibacillus sp. JDR-2] gi|247545078|gb|ACT02097.1| gid protein [Paenibacillus sp. JDR-2] Length = 443 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE +R G +IN P+ + PT + K S LF AG Sbjct: 281 GFQTHLKWGEQKRVFSLIPGLENAEFVRFGVMHRNTFINSPRVMEPTYQLKNRSTLFFAG 340 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+AA GL+AG N+AR + L+ + D+ +G M +T+ Sbjct: 341 QMTGVEGYVESAASGLIAGFNAARLARGLEPLVLPE-DTTLGSMAHYITT 389 >gi|320528985|ref|ZP_08030077.1| tRNA:M(5)U-54 methyltransferase [Selenomonas artemidis F0399] gi|320138615|gb|EFW30505.1| tRNA:M(5)U-54 methyltransferase [Selenomonas artemidis F0399] Length = 443 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 38/100 (38%), Positives = 52/100 (52%), Gaps = 1/100 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGL +R G +IN P+ L PT + + + LF AG Sbjct: 280 GFQTRLKWAEQRRVFRMIPGLSHAEFLRYGVMHRNTFINAPRHLRPTFQLRSENTLFFAG 339 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSY 407 Q+ G GY E+AA GL AGIN+AR + + F +T + Sbjct: 340 QMTGVEGYVESAASGLTAGINAARIAADRTPVVFPQTTCH 379 Score = 43.5 bits (101), Expect = 0.098, Method: Compositional matrix adjust. Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 13/84 (15%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGLG---- 54 VIV+G G AG EAA AA+ GA L HKT + C+ ++ G G Sbjct: 4 VIVVGAGLAGSEAAWQAARRGAEVTLFEMRPGRTSPAHKTDDFAELVCSNSLRGAGLENA 63 Query: 55 KGHLVREIDALDGLMGRVADAAGI 78 G L E+ +D L+ R ADA + Sbjct: 64 VGVLKEEMRRMDSLIIRAADATAV 87 >gi|116512035|ref|YP_809251.1| tRNA (uracil-5-)-methyltransferase Gid [Lactococcus lactis subsp. cremoris SK11] gi|123125575|sp|Q02YZ3|TRMFO_LACLS RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|116107689|gb|ABJ72829.1| tRNA uridine 5-carboxymethylaminomethyl modification FAD-utilizing enzyme [Lactococcus lactis subsp. cremoris SK11] Length = 448 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 38/97 (39%), Positives = 53/97 (54%), Gaps = 1/97 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +++K LF AG Sbjct: 288 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLKQTFQSRKQENLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 Q+ G GY E+AA GLVAGIN+A+ N + + F +T Sbjct: 348 QMTGVEGYVESAASGLVAGINAAKLFNDEEVVIFPKT 384 >gi|315302914|ref|ZP_07873648.1| tRNA:M(5)U-54 methyltransferase [Listeria ivanovii FSL F6-596] gi|313628717|gb|EFR97116.1| tRNA:M(5)U-54 methyltransferase [Listeria ivanovii FSL F6-596] Length = 434 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 44/110 (40%), Positives = 57/110 (51%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE I+R G +IN P L PT + K LF AG Sbjct: 278 GFQTHLKWGEQKRVFGMIPGLENAEIVRYGVMHRNTFINSPTVLKPTYQLKSRDDLFFAG 337 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+AA GL AGIN+AR + I F + ++ IG + +TS Sbjct: 338 QMTGVEGYVESAASGLAAGINAARFVENKELILFPK-ETAIGSLAHYITS 386 >gi|227535114|ref|ZP_03965163.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gid [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227187255|gb|EEI67322.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gid [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 439 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 43/109 (39%), Positives = 59/109 (54%), Gaps = 2/109 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE V I+R G ++ +P L PT +K+ LF AG Sbjct: 277 GFQTHLKWGEQKRVFRLIPGLENVQIVRYGVMHRNTFMKSPVVLEPTYASKRRPDLFFAG 336 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 Q+ G GY E+AA GL+AG N+AR + + F T + +G M D +T Sbjct: 337 QMTGVEGYVESAASGLIAGTNAARMALGETPLIFPETTA-MGSMADYIT 384 >gi|83589875|ref|YP_429884.1| tRNA (uracil-5-)-methyltransferase Gid [Moorella thermoacetica ATCC 39073] gi|123524656|sp|Q2RJP8|TRMFO_MOOTA RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|83572789|gb|ABC19341.1| gid protein [Moorella thermoacetica ATCC 39073] Length = 437 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T+L Q + R IPGL + +R G Y+N P+ L PTL+ K LFLAG Sbjct: 279 GFQTSLKWGEQERVFRLIPGLREAEFVRFGVMHRNTYVNSPRLLQPTLQVKGYPWLFLAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GLVAG+N+ R Sbjct: 339 QLTGVEGYIESAACGLVAGVNATR 362 >gi|148267741|ref|YP_001246684.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus subsp. aureus JH9] gi|150393799|ref|YP_001316474.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus subsp. aureus JH1] gi|189040809|sp|A6U169|TRMFO_STAA2 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|189040810|sp|A5ISD5|TRMFO_STAA9 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|147740810|gb|ABQ49108.1| gid protein [Staphylococcus aureus subsp. aureus JH9] gi|149946251|gb|ABR52187.1| gid protein [Staphylococcus aureus subsp. aureus JH1] Length = 435 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 123/506 (24%), Positives = 193/506 (38%), Gaps = 107/506 (21%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGL----G 54 V VIG G AG EAA A+ G LI H T + C+ ++ G G Sbjct: 5 VNVIGAGLAGSEAAYQLAERGIKVNLIEMRPVKQTPAHHTDKFAELVCSNSLRGNALTNG 64 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L E+ L+ ++ AD A + PA G DR + + + + Sbjct: 65 VGVLKEEMRRLNSIIIEAADKARV----------PA--GGALAVDRHDFSGYITETLKNH 112 Query: 115 ENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHI-GKLKI---- 169 EN+ VI E+ II+ T LTT T + ++ I GK ++ Sbjct: 113 ENITVINEEINAIPDGYTIIA-------------TGPLTTETLAQEIVDITGKDQLYFYD 159 Query: 170 PAGRMGDSPSNSLFNSFMKFDFDTGR------------LKTGTPARLDGKTIIWDKTEKQ 217 A + + S + ++K +D G A L+ + + EK+ Sbjct: 160 AAAPIIEKESIDMDKVYLKSRYDKGEAAYLNCPMTEDEFNRFYDAVLEAEVAPVNSFEKE 219 Query: 218 FADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPS 277 E +PF M ++ R L +GP Sbjct: 220 KYFEGCMPFEVMAER----------GRKTL---------------------LFGPMKPVG 248 Query: 278 IEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRP 337 +ED + G+R + L + + G T L Q + I+ IPGLE V+I+R Sbjct: 249 LEDP--KTGKRPYAVVQLRQDDAAGTLYNIVGFQTHLKWGAQKEVIKLIPGLENVDIVRY 306 Query: 338 GYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKL 396 G +IN P L E + AGQ+ G GY E+AA GLVAGIN A K Sbjct: 307 GVMHRNTFINSPDVLNEKYELISQPNIQFAGQMTGVEGYVESAASGLVAGINLAHKILGK 366 Query: 397 DCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGC- 455 + F R ++ IG M + S A+ + +P NA+ L P L Sbjct: 367 GEVVFPR-ETMIGSMA-------------YYISHAKNNKNFQPMNANFGLLP---SLETR 409 Query: 456 IGERRQKRFAKYIQEYNFLRSLLKSL 481 I +++++ A+ + ++L++ K+L Sbjct: 410 IKDKKERYEAQANRALDYLKNFKKTL 435 >gi|116494888|ref|YP_806622.1| tRNA uridine 5-carboxymethylaminomethyl modification FAD-utilizing enzyme [Lactobacillus casei ATCC 334] gi|122263694|sp|Q039E2|TRMFO_LACC3 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|116105038|gb|ABJ70180.1| tRNA uridine 5-carboxymethylaminomethyl modification FAD-utilizing enzyme [Lactobacillus casei ATCC 334] Length = 439 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 52/156 (33%), Positives = 75/156 (48%), Gaps = 17/156 (10%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE V I+R G ++ +P L PT +K+ LF AG Sbjct: 277 GFQTHLKWGEQKRVFRLIPGLENVQIVRYGVMHRNTFMKSPVVLEPTYASKRRPDLFFAG 336 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 Q+ G GY E+AA GL+AGIN+ R + + F T T+ G + Y Sbjct: 337 QMTGVEGYVESAASGLIAGINATRMALGETPVIFPET-----------TAMGSMAHYITH 385 Query: 428 TSRAEYRISLRPDNADNRLTP-IGMKLGCIGERRQK 462 TS + +P NA+ + P + +K+ ER Q+ Sbjct: 386 TSAHHF----QPMNANFGIMPALTVKIRNKKERNQQ 417 >gi|239636271|ref|ZP_04677273.1| tRNA:M(5)U-54 methyltransferase [Staphylococcus warneri L37603] gi|239597626|gb|EEQ80121.1| tRNA:M(5)U-54 methyltransferase [Staphylococcus warneri L37603] Length = 435 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 113/463 (24%), Positives = 178/463 (38%), Gaps = 85/463 (18%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGLG---- 54 V V+G G AG EAA A+ G LI H T + C+ ++ G Sbjct: 5 VNVVGAGLAGSEAAYQLAERGIKVNLIEMRPVKQTPAHHTDKFAELVCSNSLRGNALTNA 64 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L E+ LD L+ + AD A + PA G DR + + + + Sbjct: 65 VGVLKEEMRRLDSLIIKAADKARV----------PA--GGALAVDRHDFAGYITDTLRNH 112 Query: 115 ENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHI-GKLKI---- 169 N+ V+ EV II+ T LTT + ++ I GK ++ Sbjct: 113 PNVTVLNQEVHNIPEGYTIIA-------------TGPLTTENLAQEIVDITGKDQLYFYD 159 Query: 170 PAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM 229 A + + S + ++K +D G + + TE++F Sbjct: 160 AAAPIIEKDSIDMDKVYLKSRYDKG----------EAAYLNCPMTEEEF----------- 198 Query: 230 TDKITNRQIECGITRTN-LETHRIIMENIKHSAIYSGDIKS--YGPRYCPSIEDKIVRFG 286 D+ N +E + N E + + + + K+ +GP +ED + G Sbjct: 199 -DRFYNAVLEAEVAPVNEFEKEKYFEGCMPFEVMAARGRKTLLFGPMKPVGLEDP--KTG 255 Query: 287 ERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI 346 +R + L + + G T L Q + I+ IPGLE V+I+R G +I Sbjct: 256 KRPFAVVQLRQDDAAGTLYNIVGFQTHLKWGAQKEVIKLIPGLENVDIVRYGVMHRNTFI 315 Query: 347 N-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTD 405 N P L E ++ AGQ+ G GY E+AA GLV+GIN A K + F R + Sbjct: 316 NSPDVLNEKYELIGHENIYFAGQMTGVEGYVESAASGLVSGINLAHKLLDKGEVIFPR-E 374 Query: 406 SYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTP 448 + IG M + S A+ + +P NA+ L P Sbjct: 375 TMIGSMA-------------YYISHAKNEKNFQPMNANFGLLP 404 >gi|134299830|ref|YP_001113326.1| gid protein [Desulfotomaculum reducens MI-1] gi|189040805|sp|A4J5Z8|TRMFO_DESRM RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|134052530|gb|ABO50501.1| gid protein [Desulfotomaculum reducens MI-1] Length = 441 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 40/104 (38%), Positives = 56/104 (53%), Gaps = 1/104 (0%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE +R G YI +P L PTL+ K+ +F AG Sbjct: 280 GFQTNLKWGEQKRVFSFIPGLEDAEFVRYGVMHRNTYITSPVLLQPTLQMKEHPRIFFAG 339 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 QI G GY E+AA GL+AGIN+A + + D + F + ++ +M Sbjct: 340 QITGVEGYVESAAAGLIAGINAAALAKQKDLLIFPKETAHGALM 383 >gi|55981411|ref|YP_144708.1| tRNA (uracil-5-)-methyltransferase Gid [Thermus thermophilus HB8] gi|81821827|sp|Q5SID2|TRMFO_THET8 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|237823899|pdb|3G5Q|A Chain A, Crystal Structure Of Thermus Thermophilus Trmfo gi|237823900|pdb|3G5R|A Chain A, Crystal Structure Of Thermus Thermophilus Trmfo In Complex With Tetrahydrofolate gi|55772824|dbj|BAD71265.1| glucose inhibited division protein [Thermus thermophilus HB8] Length = 443 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 41/110 (37%), Positives = 61/110 (55%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + I+ IPGLE I+R G Y+N P+ L TLE ++ GL+ AG Sbjct: 276 GFQTGLKWPEQKRLIQMIPGLENAEIVRYGVMHRNTYLNAPRLLGETLEFREAEGLYAAG 335 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 + G GY E+AA G +AG+N+ARK+ L + +S +G ++ L + Sbjct: 336 VLAGVEGYLESAATGFLAGLNAARKALGLPPVA-PPEESMLGGLVRYLAT 384 >gi|42519035|ref|NP_964965.1| tRNA (uracil-5-)-methyltransferase Gid [Lactobacillus johnsonii NCC 533] gi|50400234|sp|Q74JJ8|TRMFO_LACJO RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|41583322|gb|AAS08931.1| glucose inhibited division protein A [Lactobacillus johnsonii NCC 533] Length = 438 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 41/110 (37%), Positives = 61/110 (55%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE +R G YI +P+ L E +K +GLF AG Sbjct: 279 GFQTHLKYGEQKRVFSMIPGLENAKFVRYGKMHRNTYIASPEVLNANYEARKQTGLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+A GLVAGIN+AR++ + + F ++ + +G M + +T+ Sbjct: 339 QMTGVEGYVESAGSGLVAGINAAREALGEETLFFPKSTA-LGSMANYITT 387 >gi|323464637|gb|ADX76790.1| tRNA (uracil-5-)-methyltransferase [Staphylococcus pseudintermedius ED99] Length = 434 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 49/141 (34%), Positives = 67/141 (47%), Gaps = 15/141 (10%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IR IPGLE V+I+R G +IN P+ L E K LF AG Sbjct: 277 GFQTRLKWGAQKEVIRLIPGLENVDIVRYGVMHRNTFINSPEVLSEIYEFKNRKNLFFAG 336 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 Q+ G GY E+AA G++AGIN A + + F R ++ +G M + Sbjct: 337 QMTGVEGYVESAASGMIAGINLAHRMLGKADVVFPR-ETMLGSMA-------------YY 382 Query: 428 TSRAEYRISLRPDNADNRLTP 448 S A + +P NA+ L P Sbjct: 383 ISHATNNKNFQPMNANFGLVP 403 >gi|320161094|ref|YP_004174318.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gid [Anaerolinea thermophila UNI-1] gi|319994947|dbj|BAJ63718.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gid [Anaerolinea thermophila UNI-1] Length = 456 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 102/397 (25%), Positives = 161/397 (40%), Gaps = 56/397 (14%) Query: 16 AGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGL----GKGHLVREI 62 AG EAA AAK G L H TS +G + C+ ++G G L E+ Sbjct: 12 AGSEAAWQAAKAGLKVDLYEMRPQKSTGAHSTSFLGELVCSNSLGSALVDRASGLLKEEL 71 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 L L+ VA+ + PA G DRE++ + +I S N+ VI+ Sbjct: 72 RLLGSLLLSVAEECAL----------PA--GGALAVDREMFAQTITEKIESHPNIRVIRE 119 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGT----FLRGVIHIGKLKIPAGRMGDSP 178 E + II+S + ++ + + TGT F + I + + Sbjct: 120 EYPTIPSRPAIIASGPLTSPTLSKA--IQELTGTEHLFFFDAIAPIVRAE---------- 167 Query: 179 SNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQI 238 + ++ +F + G ++ +G I T +++ E+ I +++I R+ Sbjct: 168 TINMEKAFRASRYQRGVIE-------EGDYINCPFTREEY--EQFIEALLNSERIPLREF 218 Query: 239 ECGI---TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFL 295 E I R + I+ A + ++GP + D G+R + L Sbjct: 219 EEEIKHGVRAGAHEYFEGCLPIEVLAARGKEALAFGPMRPIGLRDP--HTGKRPYAVVQL 276 Query: 296 EPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPT 354 + L + G T L Q + R IPGLE +R G +I +P L PT Sbjct: 277 RQDNLAGTLYNLVGFQTNLTFPEQRRVFRMIPGLENAEFVRYGQMHRNTFIASPALLLPT 336 Query: 355 LETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSAR 391 L+ +K S LF AGQI G GY A GL+AGIN+AR Sbjct: 337 LQFRKRSDLFFAGQITGVEGYMGNIATGLLAGINAAR 373 >gi|300361599|ref|ZP_07057776.1| tRNA:M(5)U-54 methyltransferase [Lactobacillus gasseri JV-V03] gi|300354218|gb|EFJ70089.1| tRNA:M(5)U-54 methyltransferase [Lactobacillus gasseri JV-V03] Length = 438 Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 41/110 (37%), Positives = 60/110 (54%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE +R G YI +P+ L E +K +GLF AG Sbjct: 279 GFQTHLKYGEQKRVFSMIPGLENAKFVRYGKMHRNTYIASPEVLNANYEARKQAGLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+A GLVAGIN+AR++ + + F ++ + +G M +T+ Sbjct: 339 QMTGVEGYVESAGSGLVAGINAAREAIGEETLVFPKSTA-LGSMAHYITT 387 >gi|319892266|ref|YP_004149141.1| tRNA:m(5)U-54 MTase gid [Staphylococcus pseudintermedius HKU10-03] gi|317161962|gb|ADV05505.1| tRNA:m(5)U-54 MTase gid [Staphylococcus pseudintermedius HKU10-03] Length = 434 Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 49/141 (34%), Positives = 67/141 (47%), Gaps = 15/141 (10%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IR IPGLE V+I+R G +IN P+ L E K LF AG Sbjct: 277 GFQTRLKWGAQKEVIRLIPGLENVDIVRYGVMHRNTFINSPEVLSEIYEFKNRKNLFFAG 336 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 Q+ G GY E+AA G++AGIN A + + F R ++ +G M + Sbjct: 337 QMTGVEGYVESAASGMIAGINLAHRMLGKADVVFPR-ETMLGSMA-------------YY 382 Query: 428 TSRAEYRISLRPDNADNRLTP 448 S A + +P NA+ L P Sbjct: 383 ISHATNNKNFQPMNANFGLVP 403 >gi|324994465|gb|EGC26378.1| tRNA:M(5)U-54 methyltransferase [Streptococcus sanguinis SK678] Length = 444 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 40/97 (41%), Positives = 50/97 (51%), Gaps = 1/97 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y+N P L T +KK LF AG Sbjct: 288 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMNSPNLLEQTFRSKKQPNLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 Q+ G GY E+AA GLVAGIN+AR + + F T Sbjct: 348 QMTGVEGYVESAASGLVAGINAARLFKGEEALVFPET 384 >gi|313633456|gb|EFS00281.1| tRNA:M(5)U-54 methyltransferase [Listeria seeligeri FSL N1-067] Length = 219 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 43/110 (39%), Positives = 58/110 (52%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE I+R G +IN P L PT + K + LF AG Sbjct: 63 GFQTHLKWGEQKRVFSMIPGLENAEIVRYGVMHRNTFINSPTVLEPTYQLKSRNDLFFAG 122 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+AA GL AGIN+A + I F + ++ IG + + +TS Sbjct: 123 QMTGVEGYVESAASGLAAGINAANFVEDKELIIFPK-ETAIGSLANYITS 171 >gi|157150106|ref|YP_001450480.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus gordonii str. Challis substr. CH1] gi|189040812|sp|A8AXH0|TRMFO_STRGC RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|157074900|gb|ABV09583.1| Glucose inhibited division protein A [Streptococcus gordonii str. Challis substr. CH1] Length = 444 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 111/430 (25%), Positives = 166/430 (38%), Gaps = 73/430 (16%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGG 52 +++SY + VIG G AG EAA AK G L HKT+ + C+ ++ G Sbjct: 1 MSQSY-INVIGAGLAGSEAAYQIAKRGIPVKLYEMRGVKSTPQHKTADFAELVCSNSLRG 59 Query: 53 LGKGHLVREIDALDGLMGRVADAAGIQFRVLN---VKKGPAVRGPRTQADRELYRLAMQR 109 DAL +G + + + R L+ +K A R P A LA+ R Sbjct: 60 ----------DALTNAVGLLKE----EMRRLDSVILKSAEATRVPAGGA------LAVDR 99 Query: 110 EILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKI 169 E SQ +++ T +I I + + V+ TG + KI Sbjct: 100 EGFSQMVTELV--------TNHPLIEVIREEITEIPNDDITVIATGPLTSDAL---AEKI 148 Query: 170 PAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTII----WDKTEKQFADERLIP 225 A G N F +D + T +D I +DK E + + + Sbjct: 149 HALNGG--------NGFYFYDAAAPIIDVNT---IDMTKIYLKSRYDKGEAAYLNAPMTK 197 Query: 226 FSFMT--DKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKS--YGPRYCPSIEDK 281 FM D + N + E + + E + + + IK+ YGP +E Sbjct: 198 QEFMDFHDALVNAE-EAPLN--SFEKEKYFEGCMPIEVMAKRGIKTMLYGPMKPVGLEYP 254 Query: 282 IVRFGERNGHQ------IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNII 335 G R+G + L + + G T L Q + + IPGLE + Sbjct: 255 DDYQGPRDGEYKTPYAVVQLRQDNAAGSLYNIVGFQTHLKWGEQKRVFQMIPGLENAEFV 314 Query: 336 RPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSN 394 R G Y++ P L T +KK LF AGQ+ G GY E+AA GLVAGIN+AR Sbjct: 315 RYGVMHRNSYMDSPNLLEQTFRSKKQPNLFFAGQMTGVEGYVESAASGLVAGINAARLFK 374 Query: 395 KLDCICFSRT 404 + + F T Sbjct: 375 GEEALVFPET 384 >gi|50914228|ref|YP_060200.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus pyogenes MGAS10394] gi|50903302|gb|AAT87017.1| Glucose inhibited division protein A [Streptococcus pyogenes MGAS10394] Length = 494 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 1/99 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + +TIPGLE +R G Y++ P L T +++ LF AG Sbjct: 337 GFQTHLKWGEQKRVFQTIPGLENAEFVRYGVMHRNSYMDSPNLLTETFQSRSNPNLFFAG 396 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDS 406 Q+ G GY E+AA GLVAGIN+AR + + + F +T + Sbjct: 397 QMTGVEGYVESAASGLVAGINAARLFKREEALIFPQTTA 435 >gi|229104394|ref|ZP_04235063.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus Rock3-28] gi|228679092|gb|EEL33300.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus Rock3-28] Length = 434 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + ++ IPGLE I+R G +IN P L PT + K+ LF AG Sbjct: 279 GFQTHLKWGPQKEVLQLIPGLENAEIVRYGVMHRNTFINSPNLLRPTYQYKQRDDLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+AA GL+AGIN+AR + + S + +G M + +T+ Sbjct: 339 QMTGVEGYVESAASGLLAGINAARLVKGEEPVVLSPVTA-MGSMANYITA 387 >gi|298694543|gb|ADI97765.1| probable glucose inhibited division protein A [Staphylococcus aureus subsp. aureus ED133] Length = 435 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 117/472 (24%), Positives = 175/472 (37%), Gaps = 103/472 (21%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGL----G 54 V VIG G AG EAA A+ G LI H T + C+ ++ G G Sbjct: 5 VNVIGAGLAGSEAAYQLAERGIKVNLIEMRSVKQTPAHHTDKFAELVCSNSLRGNALTNG 64 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L E+ L+ ++ AD A + PA G DR + + + + Sbjct: 65 VGVLKEEMRRLNSIIIEAADKARV----------PA--GGALAVDRHDFSGYITETLKNH 112 Query: 115 ENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHI-GKLKI---- 169 EN+ VI E+ II+ T LTT T + ++ I GK ++ Sbjct: 113 ENITVINEEINAIPDGYTIIA-------------TGPLTTETLAQEIVDITGKDQLYFYD 159 Query: 170 PAGRMGDSPSNSLFNSFMKFDFDTGR------------LKTGTPARLDGKTIIWDKTEKQ 217 A + + S + ++K +D G A L+ + + EK+ Sbjct: 160 AAAPIIEKESIDMDKVYLKSRYDKGEAAYLNCPMTEDEFNRFYDAVLEAEVAPVNSFEKE 219 Query: 218 FADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPS 277 E +PF M ++ R L +GP Sbjct: 220 KYFEGCMPFEVMAER----------GRKTL---------------------LFGPMKPVG 248 Query: 278 IEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRP 337 +ED + G+R + L + + G T L Q + I+ IPGLE V+I+R Sbjct: 249 LEDP--KTGKRPYAVVQLRQDDAAGTLYNIVGFQTHLKWGAQKEVIKLIPGLENVDIVRY 306 Query: 338 GYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKL 396 G +IN P L E + AGQ+ G GY E+AA GLVAGIN A K Sbjct: 307 GVMHRNTFINSPDVLNEKYELISQPNIQFAGQMTGVEGYVESAASGLVAGINLAHKILGK 366 Query: 397 DCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTP 448 + F R ++ IG M + S A+ + +P NA+ L P Sbjct: 367 GEVVFPR-ETMIGSMA-------------YYISHAKNNKNFQPMNANFGLLP 404 >gi|237823901|pdb|3G5S|A Chain A, Crystal Structure Of Thermus Thermophilus Trmfo In Complex With Glutathione Length = 443 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 41/110 (37%), Positives = 61/110 (55%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + I+ IPGLE I+R G Y+N P+ L TLE ++ GL+ AG Sbjct: 276 GFQTGLKWPEQKRLIQXIPGLENAEIVRYGVXHRNTYLNAPRLLGETLEFREAEGLYAAG 335 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 + G GY E+AA G +AG+N+ARK+ L + +S +G ++ L + Sbjct: 336 VLAGVEGYLESAATGFLAGLNAARKALGLPPVA-PPEESXLGGLVRYLAT 384 >gi|78779510|ref|YP_397622.1| tRNA (uracil-5-)-methyltransferase Gid [Prochlorococcus marinus str. MIT 9312] gi|123554076|sp|Q31AA9|TRMFO_PROM9 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|78713009|gb|ABB50186.1| gid protein [Prochlorococcus marinus str. MIT 9312] Length = 470 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 122/497 (24%), Positives = 202/497 (40%), Gaps = 87/497 (17%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIG 51 MI++ +VIVIG G AG EAA A G L+ H T G + C+ + G Sbjct: 1 MIDK--EVIVIGAGLAGSEAAWQIANAGVPVKLVEMRPYKSTPAHHTGEFGELVCSNSFG 58 Query: 52 GL----GKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAM 107 + G L +E+ + L+ + AD + PA G DR + A+ Sbjct: 59 AISADRAAGLLQKELRIFNSLIVQTADKFAV----------PA--GGALAVDRSKFSNAL 106 Query: 108 QREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKL 167 + + +++ + E +++NI +L TG + K+ Sbjct: 107 TETLSNHPLINIKRIEQLDLPSKENI----------------TILATGPLTSDDLAY-KI 149 Query: 168 KIPAG----RMGDSPSNSLFNSFMKFD--FDTGRLKTGTPARLDGKTIIWDKTEKQFADE 221 + G D+ S ++ + + F R G PA L+ DK E Sbjct: 150 QDFTGIDDCHFFDAASPIIYGDSIDHEIVFKASRYDKGDPAYLNCPM---DKYEYTNFRN 206 Query: 222 RLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYS---GDIKSYG---PRYC 275 +LI K ++ N + +E I I + G +KS G P++ Sbjct: 207 QLIEGEQANLKDFEKE------SANFFEACLPIEEIARRGIDTMRYGPLKSIGLWNPKWG 260 Query: 276 PSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNII 335 + D+ R +R + L E L ++ G T L Q + R IPGLEK + Sbjct: 261 -DLFDRDNRLKKRPHAIVQLRKEDLEGKLLNMVGFQTNLKWSEQKRIFRIIPGLEKAEFV 319 Query: 336 RPGYAIEYDYI-NPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSN 394 R G ++ +PK L PTL+ K LF AGQI GT GY AAA GL+AGIN++ + Sbjct: 320 RFGVMHRNTFLESPKLLLPTLQFMKRESLFAAGQITGTEGYAAAAAGGLLAGINASLIAK 379 Query: 395 KLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLG 454 + F +S IG +++ ++++ ++ +S+ + N+ PI G Sbjct: 380 GEIAVTFP-DESMIGSLMNFISNRN-----KIMSSQKK-----------NKFQPIPASFG 422 Query: 455 CIGE---RRQKRFAKYI 468 + E R + + ++YI Sbjct: 423 LVPELTKRIKDKRSRYI 439 >gi|77405695|ref|ZP_00782782.1| gid protein [Streptococcus agalactiae H36B] gi|77408608|ref|ZP_00785343.1| gid protein [Streptococcus agalactiae COH1] gi|77172801|gb|EAO75935.1| gid protein [Streptococcus agalactiae COH1] gi|77175691|gb|EAO78473.1| gid protein [Streptococcus agalactiae H36B] Length = 444 Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 42/109 (38%), Positives = 57/109 (52%), Gaps = 2/109 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T T+K LF AG Sbjct: 288 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLNQTFATRKNPNLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 Q+ G GY E+AA GLVAGIN+ R+ N + F +T + IG + +T Sbjct: 348 QMTGVEGYVESAASGLVAGINAVRRFNGESEVVFPQTTA-IGALPHYIT 395 >gi|73919636|sp|Q5XC46|TRMFO_STRP6 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase Length = 448 Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 38/97 (39%), Positives = 53/97 (54%), Gaps = 1/97 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + +TIPGLE +R G Y++ P L T +++ LF AG Sbjct: 291 GFQTHLKWGEQKRVFQTIPGLENAEFVRYGVMHRNSYMDSPNLLTETFQSRSNPNLFFAG 350 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 Q+ G GY E+AA GLVAGIN+AR + + + F +T Sbjct: 351 QMTGVEGYVESAASGLVAGINAARLFKREEALIFPQT 387 >gi|288905293|ref|YP_003430515.1| glucose-inhibited division protein [Streptococcus gallolyticus UCN34] gi|306831372|ref|ZP_07464531.1| tRNA:M(5)U-54 methyltransferase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|288732019|emb|CBI13584.1| glucose-inhibited division protein [Streptococcus gallolyticus UCN34] gi|304426432|gb|EFM29545.1| tRNA:M(5)U-54 methyltransferase [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 445 Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 1/97 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE +R G Y++ P L T T++ LF AG Sbjct: 289 GFQTHLKWGEQKRVFRMIPGLENAEFVRYGVMHRNSYMDSPNLLTETFATRQNPDLFFAG 348 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 Q+ G GY E+AA GLVAGIN+ R+ + + F +T Sbjct: 349 QMTGVEGYVESAASGLVAGINAVRRFKGEEAVIFPQT 385 >gi|118479054|ref|YP_896205.1| tRNA (uracil-5-)-methyltransferase Gid [Bacillus thuringiensis str. Al Hakam] gi|118418279|gb|ABK86698.1| glucose-inhibited division protein A [Bacillus thuringiensis str. Al Hakam] Length = 452 Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + ++ IPGLE I+R G +IN P L PT + K+ LF AG Sbjct: 297 GFQTHLKWGPQKEVLQLIPGLENAEIVRYGVMHRNTFINSPNLLRPTYQYKQRDDLFFAG 356 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GL+AGIN+AR Sbjct: 357 QMTGVEGYVESAASGLLAGINAAR 380 >gi|65321159|ref|ZP_00394118.1| COG1206: NAD(FAD)-utilizing enzyme possibly involved in translation [Bacillus anthracis str. A2012] Length = 452 Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + ++ IPGLE I+R G +IN P L PT + K+ LF AG Sbjct: 297 GFQTHLKWGPQKEVLQLIPGLENAEIVRYGVMHRNTFINSPNLLRPTYQYKQRDDLFFAG 356 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GL+AGIN+AR Sbjct: 357 QMTGVEGYVESAASGLLAGINAAR 380 >gi|228992560|ref|ZP_04152487.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus pseudomycoides DSM 12442] gi|228767194|gb|EEM15830.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus pseudomycoides DSM 12442] Length = 434 Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + ++ IPGLE I+R G +IN P+ L PT + K LF AG Sbjct: 279 GFQTHLKWGPQKEVLQLIPGLENAEIVRYGVMHRNTFINSPRLLRPTYQYKHRDDLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GL+AGIN+AR Sbjct: 339 QMTGVEGYVESAASGLLAGINAAR 362 >gi|146318555|ref|YP_001198267.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus suis 05ZYH33] gi|146320753|ref|YP_001200464.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus suis 98HAH33] gi|253751678|ref|YP_003024819.1| protein Gid homolog [Streptococcus suis SC84] gi|253753580|ref|YP_003026721.1| protein Gid homolog [Streptococcus suis P1/7] gi|253755607|ref|YP_003028747.1| protein Gid homolog [Streptococcus suis BM407] gi|166989570|sp|A4W125|TRMFO_STRS2 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|166989572|sp|A4VUS8|TRMFO_STRSY RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|145689361|gb|ABP89867.1| NAD(FAD)-utilizing enzyme possibly involved in translation [Streptococcus suis 05ZYH33] gi|145691559|gb|ABP92064.1| NAD(FAD)-utilizing enzyme possibly involved in translation [Streptococcus suis 98HAH33] gi|251815967|emb|CAZ51583.1| protein Gid homolog [Streptococcus suis SC84] gi|251818071|emb|CAZ55863.1| protein Gid homolog [Streptococcus suis BM407] gi|251819826|emb|CAR45789.1| protein Gid homolog [Streptococcus suis P1/7] gi|292558324|gb|ADE31325.1| Gid protein [Streptococcus suis GZ1] gi|319758105|gb|ADV70047.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus suis JS14] Length = 444 Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 41/104 (39%), Positives = 56/104 (53%), Gaps = 2/104 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T TKK LF AG Sbjct: 288 GFQTHLKWGEQKRIFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTFATKKNPNLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 Q+ G GY E+AA GLVAGIN+ R+ + + + F +T + IG + Sbjct: 348 QMTGVEGYVESAASGLVAGINAVRRFHGEEPVIFPQTTA-IGAL 390 Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust. Identities = 38/128 (29%), Positives = 53/128 (41%), Gaps = 25/128 (19%) Query: 10 VIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGG----LGKG 56 VIG G AG EAA AK G L HKT + C+ + G G Sbjct: 8 VIGAGLAGSEAAYQIAKRGIPVKLYEMRGVKPTPQHKTDKFAELVCSNSFRGDSLTNAVG 67 Query: 57 HLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQEN 116 L E+ LD ++ R +A + PA G DRE + A+ EI + Sbjct: 68 LLKEEMRRLDSIIMRAGEAHRV----------PA--GGAMAMDRENFSQAVTDEIHNHPL 115 Query: 117 LDVIQGEV 124 ++VI+GE+ Sbjct: 116 IEVIRGEI 123 >gi|325978278|ref|YP_004287994.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325178206|emb|CBZ48250.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 445 Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 1/97 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE +R G Y++ P L T T++ LF AG Sbjct: 289 GFQTHLKWGEQKRVFRMIPGLENAEFVRYGVMHRNSYMDSPNLLTETFATRQNPDLFFAG 348 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 Q+ G GY E+AA GLVAGIN+ R+ + + F +T Sbjct: 349 QMTGVEGYVESAASGLVAGINAVRRFKGEEAVIFPQT 385 >gi|116629572|ref|YP_814744.1| tRNA (uracil-5-)-methyltransferase Gid [Lactobacillus gasseri ATCC 33323] gi|282852049|ref|ZP_06261407.1| tRNA:M(5)U-54 methyltransferase [Lactobacillus gasseri 224-1] gi|311110784|ref|ZP_07712181.1| tRNA:M(5)U-54 methyltransferase [Lactobacillus gasseri MV-22] gi|122273490|sp|Q043R6|TRMFO_LACGA RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|116095154|gb|ABJ60306.1| tRNA uridine 5-carboxymethylaminomethyl modification FAD-utilizing enzyme [Lactobacillus gasseri ATCC 33323] gi|282556809|gb|EFB62413.1| tRNA:M(5)U-54 methyltransferase [Lactobacillus gasseri 224-1] gi|311065938|gb|EFQ46278.1| tRNA:M(5)U-54 methyltransferase [Lactobacillus gasseri MV-22] Length = 438 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 40/110 (36%), Positives = 60/110 (54%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE +R G YI +P+ L E +K +GLF AG Sbjct: 279 GFQTHLKYGEQKRVFSMIPGLENAKFVRYGKMHRNTYIASPEVLNANYEARKQAGLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+A GL+AGIN+AR++ + + F ++ + +G M +T+ Sbjct: 339 QMTGVEGYVESAGSGLIAGINAARETVGEETLVFPKSTA-LGSMAHYITT 387 >gi|282916511|ref|ZP_06324269.1| tRNA:m(5)U-54 methyltransferase [Staphylococcus aureus subsp. aureus D139] gi|283770315|ref|ZP_06343207.1| methylenetetrahydrofolate-tRNA-(uracil-5-)- methyltransferase trmFO [Staphylococcus aureus subsp. aureus H19] gi|282318998|gb|EFB49350.1| tRNA:m(5)U-54 methyltransferase [Staphylococcus aureus subsp. aureus D139] gi|283460462|gb|EFC07552.1| methylenetetrahydrofolate-tRNA-(uracil-5-)- methyltransferase trmFO [Staphylococcus aureus subsp. aureus H19] Length = 435 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 117/472 (24%), Positives = 175/472 (37%), Gaps = 103/472 (21%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGL----G 54 V VIG G AG EAA A+ G LI H T + C+ ++ G G Sbjct: 5 VNVIGAGLAGSEAAYQLAERGIKVNLIEMRPVKQTPAHHTDKFAELVCSNSLRGNALTNG 64 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L E+ L+ ++ AD A + PA G DR + + + + Sbjct: 65 VGVLKEEMRRLNSIIIEAADKARV----------PA--GGALAVDRHDFSGYITETLKNH 112 Query: 115 ENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHI-GKLKI---- 169 EN+ VI E+ II+ T LTT T + ++ I GK ++ Sbjct: 113 ENITVINEEINAIPDGYTIIA-------------TGPLTTETLAQEIVDITGKDQLYFYD 159 Query: 170 PAGRMGDSPSNSLFNSFMKFDFDTGR------------LKTGTPARLDGKTIIWDKTEKQ 217 A + + S + ++K +D G A L+ + + EK+ Sbjct: 160 AAAPIIEKESIDMDKVYLKSRYDKGEAAYLNCPMTEDEFNRFYDAVLEAEVAPVNSFEKE 219 Query: 218 FADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPS 277 E +PF M ++ R L +GP Sbjct: 220 KYFEGCMPFEVMAER----------GRKTL---------------------LFGPMKPVG 248 Query: 278 IEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRP 337 +ED + G+R + L + + G T L Q + I+ IPGLE V+I+R Sbjct: 249 LEDP--KTGKRPYAVVQLRQDDAAGTLYNIVGFQTHLKWGAQKEIIKLIPGLENVDIVRY 306 Query: 338 GYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKL 396 G +IN P L E + AGQ+ G GY E+AA GLVAGIN A K Sbjct: 307 GVMHRNTFINSPDVLNEKYELISRPNIQFAGQMTGVEGYVESAASGLVAGINLAHKILGK 366 Query: 397 DCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTP 448 + F R ++ IG M + S A+ + +P NA+ L P Sbjct: 367 GEVVFPR-ETMIGSMA-------------YYISHAKNNKNFQPMNANFGLLP 404 >gi|228998608|ref|ZP_04158195.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus mycoides Rock3-17] gi|229006108|ref|ZP_04163796.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus mycoides Rock1-4] gi|228755184|gb|EEM04541.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus mycoides Rock1-4] gi|228761076|gb|EEM10035.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus mycoides Rock3-17] Length = 434 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + ++ IPGLE I+R G +IN P+ L PT + K LF AG Sbjct: 279 GFQTHLKWGPQKEVLQLIPGLENAEIVRYGVMHRNTFINSPRLLRPTYQYKHRDDLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GL+AGIN+AR Sbjct: 339 QMTGVEGYVESAASGLLAGINAAR 362 >gi|22537130|ref|NP_687981.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus agalactiae 2603V/R] gi|76788131|ref|YP_329685.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus agalactiae A909] gi|76797793|ref|ZP_00780059.1| gid protein [Streptococcus agalactiae 18RS21] gi|77412433|ref|ZP_00788739.1| gid protein [Streptococcus agalactiae CJB111] gi|33301133|sp|Q8DZX5|TRMFO_STRA5 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|123601865|sp|Q3K1B8|TRMFO_STRA1 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|22533992|gb|AAM99853.1|AE014236_7 gid protein [Streptococcus agalactiae 2603V/R] gi|76563188|gb|ABA45772.1| gid protein [Streptococcus agalactiae A909] gi|76586869|gb|EAO63361.1| gid protein [Streptococcus agalactiae 18RS21] gi|77161524|gb|EAO72529.1| gid protein [Streptococcus agalactiae CJB111] Length = 444 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 42/109 (38%), Positives = 57/109 (52%), Gaps = 2/109 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T T+K LF AG Sbjct: 288 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLNQTFATRKNPNLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 Q+ G GY E+AA GLVAGIN+ R+ N + F +T + IG + +T Sbjct: 348 QMTGVEGYVESAASGLVAGINAVRRFNGESEVVFPQTTA-IGALPHYIT 395 >gi|15924241|ref|NP_371775.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus subsp. aureus Mu50] gi|15926834|ref|NP_374367.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus subsp. aureus N315] gi|21282863|ref|NP_645951.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus subsp. aureus MW2] gi|49486090|ref|YP_043311.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus subsp. aureus MSSA476] gi|57651820|ref|YP_186126.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus subsp. aureus COL] gi|82750852|ref|YP_416593.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus RF122] gi|87161842|ref|YP_493841.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88194959|ref|YP_499759.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151221373|ref|YP_001332195.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus subsp. aureus str. Newman] gi|156979572|ref|YP_001441831.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus subsp. aureus Mu3] gi|161509417|ref|YP_001575076.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221142041|ref|ZP_03566534.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253315608|ref|ZP_04838821.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|255006038|ref|ZP_05144639.2| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257795693|ref|ZP_05644672.1| tRNA:m(5)U-54 methyltransferase [Staphylococcus aureus A9781] gi|258415917|ref|ZP_05682187.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus A9763] gi|258421679|ref|ZP_05684603.1| tRNA:m(5)U-54 methyltransferase [Staphylococcus aureus A9719] gi|258434835|ref|ZP_05688909.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus A9299] gi|258444589|ref|ZP_05692918.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus A8115] gi|258447578|ref|ZP_05695722.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus A6300] gi|258449420|ref|ZP_05697523.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus A6224] gi|258452550|ref|ZP_05700556.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus A5948] gi|258454799|ref|ZP_05702763.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus A5937] gi|262051313|ref|ZP_06023536.1| glucose-inhibited division protein A [Staphylococcus aureus 930918-3] gi|269202867|ref|YP_003282136.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus subsp. aureus ED98] gi|282892739|ref|ZP_06300974.1| tRNA:m(5)U-54 methyltransferase [Staphylococcus aureus A8117] gi|282920495|ref|ZP_06328216.1| tRNA:m(5)U-54 methyltransferase [Staphylococcus aureus A9765] gi|282927593|ref|ZP_06335209.1| tRNA:m(5)U-54 methyltransferase [Staphylococcus aureus A10102] gi|284024244|ref|ZP_06378642.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus subsp. aureus 132] gi|294848246|ref|ZP_06788993.1| tRNA:m(5)U-54 methyltransferase [Staphylococcus aureus A9754] gi|295406187|ref|ZP_06815994.1| tRNA:m(5)U-54 methyltransferase [Staphylococcus aureus A8819] gi|296274809|ref|ZP_06857316.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus subsp. aureus MR1] gi|297208103|ref|ZP_06924534.1| FADH(2)-oxidizing protein [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297244415|ref|ZP_06928298.1| tRNA:m(5)U-54 methyltransferase [Staphylococcus aureus A8796] gi|300912184|ref|ZP_07129627.1| tRNA:M(5)U-54 methyltransferase [Staphylococcus aureus subsp. aureus TCH70] gi|304381185|ref|ZP_07363838.1| tRNA:M(5)U-54 methyltransferase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|54037184|sp|P64235|TRMFO_STAAN RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|54037185|sp|P64236|TRMFO_STAAW RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|54041088|sp|P64234|TRMFO_STAAM RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|81170600|sp|Q5HGI1|TRMFO_STAAC RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|81170602|sp|Q6G9W2|TRMFO_STAAS RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|122539696|sp|Q2FZ31|TRMFO_STAA8 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|123486195|sp|Q2FHI7|TRMFO_STAA3 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|123549066|sp|Q2YXL7|TRMFO_STAAB RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|166989568|sp|A7X1M6|TRMFO_STAA1 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|172048861|sp|A6QGF1|TRMFO_STAAE RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|189040811|sp|A8Z3T1|TRMFO_STAAT RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|13701051|dbj|BAB42346.1| glucose-inhibited division protein gid [Staphylococcus aureus subsp. aureus N315] gi|14247021|dbj|BAB57413.1| glucose-inhibited division protein gid [Staphylococcus aureus subsp. aureus Mu50] gi|21204302|dbj|BAB94999.1| glucose-inhibited division protein gid [Staphylococcus aureus subsp. aureus MW2] gi|49244533|emb|CAG42962.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus MSSA476] gi|57286006|gb|AAW38100.1| Gid protein [Staphylococcus aureus subsp. aureus COL] gi|82656383|emb|CAI80802.1| probable glucose inhibited division protein A [Staphylococcus aureus RF122] gi|87127816|gb|ABD22330.1| glucose inhibited division protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87202517|gb|ABD30327.1| gid protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150374173|dbj|BAF67433.1| glucose inhibited division protein [Staphylococcus aureus subsp. aureus str. Newman] gi|156721707|dbj|BAF78124.1| glucose-inhibited division protein gid [Staphylococcus aureus subsp. aureus Mu3] gi|160368226|gb|ABX29197.1| glucose-inhibited division protein Gid [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|257789665|gb|EEV28005.1| tRNA:m(5)U-54 methyltransferase [Staphylococcus aureus A9781] gi|257839253|gb|EEV63727.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus A9763] gi|257842365|gb|EEV66790.1| tRNA:m(5)U-54 methyltransferase [Staphylococcus aureus A9719] gi|257849196|gb|EEV73178.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus A9299] gi|257850082|gb|EEV74035.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus A8115] gi|257853769|gb|EEV76728.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus A6300] gi|257857408|gb|EEV80306.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus A6224] gi|257859768|gb|EEV82610.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus A5948] gi|257863182|gb|EEV85946.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus A5937] gi|259160688|gb|EEW45709.1| glucose-inhibited division protein A [Staphylococcus aureus 930918-3] gi|262075157|gb|ACY11130.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus subsp. aureus ED98] gi|269940742|emb|CBI49124.1| methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO [Staphylococcus aureus subsp. aureus TW20] gi|282590596|gb|EFB95673.1| tRNA:m(5)U-54 methyltransferase [Staphylococcus aureus A10102] gi|282594157|gb|EFB99144.1| tRNA:m(5)U-54 methyltransferase [Staphylococcus aureus A9765] gi|282764736|gb|EFC04861.1| tRNA:m(5)U-54 methyltransferase [Staphylococcus aureus A8117] gi|283470466|emb|CAQ49677.1| tRNA:M(5)U-54 methyltransferase [Staphylococcus aureus subsp. aureus ST398] gi|285816933|gb|ADC37420.1| tRNA:m(5)U-54 MTase gid [Staphylococcus aureus 04-02981] gi|294825046|gb|EFG41468.1| tRNA:m(5)U-54 methyltransferase [Staphylococcus aureus A9754] gi|294968775|gb|EFG44797.1| tRNA:m(5)U-54 methyltransferase [Staphylococcus aureus A8819] gi|296887346|gb|EFH26248.1| FADH(2)-oxidizing protein [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297178445|gb|EFH37691.1| tRNA:m(5)U-54 methyltransferase [Staphylococcus aureus A8796] gi|300886430|gb|EFK81632.1| tRNA:M(5)U-54 methyltransferase [Staphylococcus aureus subsp. aureus TCH70] gi|302751074|gb|ADL65251.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340168|gb|EFM06109.1| tRNA:M(5)U-54 methyltransferase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312829645|emb|CBX34487.1| tRNA:m(5)U-54 methyltransferase [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315131044|gb|EFT87028.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus subsp. aureus CGS03] gi|315198491|gb|EFU28820.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus subsp. aureus CGS01] gi|320140932|gb|EFW32779.1| tRNA:M(5)U-54 methyltransferase [Staphylococcus aureus subsp. aureus MRSA131] gi|320144352|gb|EFW36118.1| tRNA:M(5)U-54 methyltransferase [Staphylococcus aureus subsp. aureus MRSA177] gi|323441029|gb|EGA98736.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus O11] gi|323443898|gb|EGB01509.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus O46] gi|329313921|gb|AEB88334.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO [Staphylococcus aureus subsp. aureus T0131] gi|329727839|gb|EGG64290.1| tRNA:m(5)U-54 methyltransferase [Staphylococcus aureus subsp. aureus 21189] Length = 435 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 117/472 (24%), Positives = 175/472 (37%), Gaps = 103/472 (21%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGL----G 54 V VIG G AG EAA A+ G LI H T + C+ ++ G G Sbjct: 5 VNVIGAGLAGSEAAYQLAERGIKVNLIEMRPVKQTPAHHTDKFAELVCSNSLRGNALTNG 64 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L E+ L+ ++ AD A + PA G DR + + + + Sbjct: 65 VGVLKEEMRRLNSIIIEAADKARV----------PA--GGALAVDRHDFSGYITETLKNH 112 Query: 115 ENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHI-GKLKI---- 169 EN+ VI E+ II+ T LTT T + ++ I GK ++ Sbjct: 113 ENITVINEEINAIPDGYTIIA-------------TGPLTTETLAQEIVDITGKDQLYFYD 159 Query: 170 PAGRMGDSPSNSLFNSFMKFDFDTGR------------LKTGTPARLDGKTIIWDKTEKQ 217 A + + S + ++K +D G A L+ + + EK+ Sbjct: 160 AAAPIIEKESIDMDKVYLKSRYDKGEAAYLNCPMTEDEFNRFYDAVLEAEVAPVNSFEKE 219 Query: 218 FADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPS 277 E +PF M ++ R L +GP Sbjct: 220 KYFEGCMPFEVMAER----------GRKTL---------------------LFGPMKPVG 248 Query: 278 IEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRP 337 +ED + G+R + L + + G T L Q + I+ IPGLE V+I+R Sbjct: 249 LEDP--KTGKRPYAVVQLRQDDAAGTLYNIVGFQTHLKWGAQKEVIKLIPGLENVDIVRY 306 Query: 338 GYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKL 396 G +IN P L E + AGQ+ G GY E+AA GLVAGIN A K Sbjct: 307 GVMHRNTFINSPDVLNEKYELISQPNIQFAGQMTGVEGYVESAASGLVAGINLAHKILGK 366 Query: 397 DCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTP 448 + F R ++ IG M + S A+ + +P NA+ L P Sbjct: 367 GEVVFPR-ETMIGSMA-------------YYISHAKNNKNFQPMNANFGLLP 404 >gi|205373362|ref|ZP_03226166.1| tRNA (uracil-5-)-methyltransferase Gid [Bacillus coahuilensis m4-4] Length = 433 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 57/172 (33%), Positives = 86/172 (50%), Gaps = 18/172 (10%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + ++ IPGLE IIR G +IN PK L T + K L AG Sbjct: 277 GFQTHLKWGPQKEVLQLIPGLENAEIIRYGVMHRNTFINSPKILKSTYQHKDRPTLLFAG 336 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 Q+ G GY E+AA GLVAGIN+A+ + + + F + IG M + +T Sbjct: 337 QMTGVEGYVESAASGLVAGINAAKLALGEEPVVFPE-QTAIGSMANYIT----------- 384 Query: 428 TSRAEYRISLRPDNADNRLTP-IGMKLGCIGERRQKRFAKYIQE-YNFLRSL 477 T+ A+ + +P NA+ L P + K+ ER ++ + ++ NF++SL Sbjct: 385 TTNAK---NFQPMNANFGLFPALDKKIKNKQERNEQHATRALETIQNFMKSL 433 >gi|220931599|ref|YP_002508507.1| gid protein [Halothermothrix orenii H 168] gi|219992909|gb|ACL69512.1| gid protein [Halothermothrix orenii H 168] Length = 437 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 55/178 (30%), Positives = 85/178 (47%), Gaps = 24/178 (13%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + I IPGLE I+R G Y+N PK L + + +F AG Sbjct: 278 GFQTRLKWGEQKRIINMIPGLENAEIVRYGVMHRNTYLNSPKLLNSCYQLRHKENIFFAG 337 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 QI G GY E+A+ GL+AG+N+AR + + F RT T+ G L Y Sbjct: 338 QITGVEGYVESASSGLIAGLNAARLLQGKELLRFPRT-----------TAHGALSSYISN 386 Query: 428 TSRAEYRISLRPDNADNRL-TPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 ++ + L+P N + L P+ +K+ ER++K+ + +++ LK +LT Sbjct: 387 PAKDK----LQPMNINFGLFPPLDIKIRNKRERKEKKGTRALED-------LKGFMLT 433 >gi|258423908|ref|ZP_05686793.1| tRNA:m(5)U-54 methyltransferase [Staphylococcus aureus A9635] gi|257845937|gb|EEV69966.1| tRNA:m(5)U-54 methyltransferase [Staphylococcus aureus A9635] Length = 435 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 117/472 (24%), Positives = 175/472 (37%), Gaps = 103/472 (21%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGL----G 54 V VIG G AG EAA A+ G LI H T + C+ ++ G G Sbjct: 5 VNVIGAGLAGSEAAYQLAERGIKVNLIEMRPVKQTPAHHTDKFAELVCSNSLRGNALTNG 64 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L E+ L+ ++ AD A + PA G DR + + + + Sbjct: 65 VGVLKEEMRRLNSIIIEAADKARV----------PA--GGALAVDRHDFSGYITETLKNH 112 Query: 115 ENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHI-GKLKI---- 169 EN+ VI E+ II+ T LTT T + ++ I GK ++ Sbjct: 113 ENITVINEEINAIPDGYTIIA-------------TGPLTTETLAQEIVDITGKDQLYFYD 159 Query: 170 PAGRMGDSPSNSLFNSFMKFDFDTGR------------LKTGTPARLDGKTIIWDKTEKQ 217 A + + S + ++K +D G A L+ + + EK+ Sbjct: 160 AAAPIIEKESIDMDKVYLKSRYDKGEAAYLNCPMTEDEFNRFYDAVLEAEVAPVNSFEKE 219 Query: 218 FADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPS 277 E +PF M ++ R L +GP Sbjct: 220 KYFEGCMPFEVMAER----------GRKTL---------------------LFGPMKPVG 248 Query: 278 IEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRP 337 +ED + G+R + L + + G T L Q + I+ IPGLE V+I+R Sbjct: 249 LEDP--KTGKRPYAVVQLRQDDAAGTLYNIVGFQTHLKWGAQKEVIKLIPGLENVDIVRY 306 Query: 338 GYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKL 396 G +IN P L E + AGQ+ G GY E+AA GLVAGIN A K Sbjct: 307 GVMHRNTFINSPDVLNEKYELISQPNIQFAGQMTGVEGYVESAASGLVAGINLAHKILGK 366 Query: 397 DCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTP 448 + F R ++ IG M + S A+ + +P NA+ L P Sbjct: 367 AEVVFPR-ETMIGSMA-------------YYISHAKNNKNFQPMNANFGLLP 404 >gi|146296273|ref|YP_001180044.1| gid protein [Caldicellulosiruptor saccharolyticus DSM 8903] gi|205830328|sp|A4XIW8|TRMFO_CALS8 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|145409849|gb|ABP66853.1| gid protein [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 435 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 39/84 (46%), Positives = 47/84 (55%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE +R G + YIN P+ L L KK +F AG Sbjct: 277 GFQTRLKWGEQKRVFRLIPGLENAEFVRYGVMHKNSYINSPQVLTKFLSLKKYPNIFFAG 336 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 QI G GY E+AA G+VAGIN+AR Sbjct: 337 QITGVEGYLESAATGIVAGINAAR 360 >gi|75763958|ref|ZP_00743585.1| Glucose inhibited division protein A [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74488551|gb|EAO52140.1| Glucose inhibited division protein A [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 252 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + ++ IPGLE I+R G +IN P L PT + K+ LF AG Sbjct: 107 GFQTHLKWGPQKEVLQLIPGLENAEIVRYGVMHRNTFINSPNLLRPTYQYKQRDDLFFAG 166 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GL+AGIN+AR Sbjct: 167 QMTGVEGYVESAASGLLAGINAAR 190 >gi|239631512|ref|ZP_04674543.1| tRNA (uracil-5-)-methyltransferase Gid [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239525977|gb|EEQ64978.1| tRNA (uracil-5-)-methyltransferase Gid [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 439 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 52/156 (33%), Positives = 75/156 (48%), Gaps = 17/156 (10%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE V I+R G ++ +P L PT +K+ LF AG Sbjct: 277 GFQTHLKWGEQKRVFRLIPGLENVQIVRYGVMHRNTFMKSPVVLEPTYASKRRPDLFFAG 336 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 Q+ G GY E+AA GL+AG N+AR + + F T T+ G + Y Sbjct: 337 QMTGVEGYVESAASGLIAGTNAARMALGETPLIFPET-----------TAMGSMAHYITH 385 Query: 428 TSRAEYRISLRPDNADNRLTP-IGMKLGCIGERRQK 462 TS + +P NA+ + P + +K+ ER Q+ Sbjct: 386 TSAHHF----QPMNANFGIMPALTVKIRNKKERNQQ 417 >gi|33240036|ref|NP_874978.1| tRNA (uracil-5-)-methyltransferase Gid [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|81664815|sp|Q7VD04|TRMFO_PROMA RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|33237562|gb|AAP99630.1| NAD(FAD)-utilizing enzyme possibly [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 468 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 109/418 (26%), Positives = 158/418 (37%), Gaps = 71/418 (16%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGG 52 + +S ++VIG G AG EAA A G LI H ++ + C+ + G Sbjct: 1 MGQSTPLLVIGAGLAGSEAAWQIASAGIPVKLIEMRPCKRSPAHHSNDFAELVCSNSFGA 60 Query: 53 L----GKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQ 108 L G L E+ L + + AD + PA G DR + + Sbjct: 61 LSSDRASGLLQEELRILKSFVIKTADEHSV----------PA--GGALAVDRNKFSSYIT 108 Query: 109 REILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLK 168 ++I S + V + E+ E I VL TG + G LK Sbjct: 109 KKISSHPLITVQRDEIHSLPFENQI----------------SVLATGPLTSEHL-AGDLK 151 Query: 169 IPAG----RMGDSPSNSLFNSFMKFD--FDTGRLKTGTPARLDGKTIIWDKTEKQFADER 222 G D+ S + + F F R G D + + Q+ R Sbjct: 152 NFTGLEECHFFDAASPIIEGESIDFSLAFRASRYDKG-----DADYVNCPLNKDQYLKFR 206 Query: 223 LIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGP---------R 273 S D+ + E G++ NL + +E + A D YGP R Sbjct: 207 SELLS--ADQAEIKDFEKGVS--NLFEGCLPIEEL---ARRGEDTMRYGPLKPVGLWDNR 259 Query: 274 YCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVN 333 + + DK +R +R + L E N + G T L Q + IR IPGL+K Sbjct: 260 WG-DLHDKELRKTKRAYAVVQLRQEDKNGHLWNLVGFQTNLKWGEQKRIIRLIPGLQKAE 318 Query: 334 IIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSA 390 +R G +I +PK L PTL+ +K L AGQI GT GY A A G +AG N+A Sbjct: 319 FVRLGVMHRNTFIESPKLLNPTLQFRKRLNLLAAGQITGTEGYAAAVAGGWLAGTNAA 376 >gi|228902335|ref|ZP_04066492.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus thuringiensis IBL 4222] gi|228857304|gb|EEN01807.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus thuringiensis IBL 4222] Length = 434 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + ++ IPGLE I+R G +IN P L PT + K+ LF AG Sbjct: 279 GFQTHLKWGPQKEVLQLIPGLENAEIVRYGVMHRNTFINSPNLLRPTYQYKQRDDLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GL+AGIN+AR Sbjct: 339 QMTGVEGYVESAASGLLAGINAAR 362 >gi|257425305|ref|ZP_05601730.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus subsp. aureus 55/2053] gi|257433359|ref|ZP_05609717.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus subsp. aureus E1410] gi|257436201|ref|ZP_05612248.1| tRNA:m(5)U-54 methyltransferase [Staphylococcus aureus subsp. aureus M876] gi|282910823|ref|ZP_06318626.1| tRNA:m(5)U-54 methyltransferase [Staphylococcus aureus subsp. aureus WBG10049] gi|282914028|ref|ZP_06321815.1| Gid protein [Staphylococcus aureus subsp. aureus M899] gi|282918950|ref|ZP_06326685.1| tRNA:m(5)U-54 methyltransferase [Staphylococcus aureus subsp. aureus C427] gi|282924073|ref|ZP_06331749.1| tRNA:m(5)U-54 methyltransferase [Staphylococcus aureus subsp. aureus C101] gi|293501060|ref|ZP_06666911.1| tRNA:m(5)U-54 methyltransferase [Staphylococcus aureus subsp. aureus 58-424] gi|293510022|ref|ZP_06668730.1| tRNA:m(5)U-54 methyltransferase [Staphylococcus aureus subsp. aureus M809] gi|293526608|ref|ZP_06671293.1| Gid protein [Staphylococcus aureus subsp. aureus M1015] gi|257271762|gb|EEV03900.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus subsp. aureus 55/2053] gi|257281452|gb|EEV11589.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus subsp. aureus E1410] gi|257284483|gb|EEV14603.1| tRNA:m(5)U-54 methyltransferase [Staphylococcus aureus subsp. aureus M876] gi|282314045|gb|EFB44437.1| tRNA:m(5)U-54 methyltransferase [Staphylococcus aureus subsp. aureus C101] gi|282316760|gb|EFB47134.1| tRNA:m(5)U-54 methyltransferase [Staphylococcus aureus subsp. aureus C427] gi|282322096|gb|EFB52420.1| Gid protein [Staphylococcus aureus subsp. aureus M899] gi|282325428|gb|EFB55737.1| tRNA:m(5)U-54 methyltransferase [Staphylococcus aureus subsp. aureus WBG10049] gi|290920680|gb|EFD97743.1| Gid protein [Staphylococcus aureus subsp. aureus M1015] gi|291096065|gb|EFE26326.1| tRNA:m(5)U-54 methyltransferase [Staphylococcus aureus subsp. aureus 58-424] gi|291466966|gb|EFF09484.1| tRNA:m(5)U-54 methyltransferase [Staphylococcus aureus subsp. aureus M809] gi|312438370|gb|ADQ77441.1| tRNA:M(5)U-54 methyltransferase [Staphylococcus aureus subsp. aureus TCH60] Length = 435 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 117/472 (24%), Positives = 175/472 (37%), Gaps = 103/472 (21%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGL----G 54 V VIG G AG EAA A+ G LI H T + C+ ++ G G Sbjct: 5 VNVIGAGLAGSEAAYQLAERGIKVNLIEMRPVKQTPAHHTDKFAELVCSNSLRGNALTNG 64 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L E+ L+ ++ AD A + PA G DR + + + + Sbjct: 65 VGVLKEEMRRLNSIIIEAADKARV----------PA--GGALAVDRHDFSGYITETLKNH 112 Query: 115 ENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHI-GKLKI---- 169 EN+ VI E+ II+ T LTT T + ++ I GK ++ Sbjct: 113 ENITVINEEINAIPDGYTIIA-------------TGPLTTETLAQEIVDITGKDQLYFYD 159 Query: 170 PAGRMGDSPSNSLFNSFMKFDFDTGR------------LKTGTPARLDGKTIIWDKTEKQ 217 A + + S + ++K +D G A L+ + + EK+ Sbjct: 160 AAAPIIEKESIDMDKVYLKSRYDKGEAAYLNCPMTEDEFNRFYDAVLEAEAAPVNSFEKE 219 Query: 218 FADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPS 277 E +PF M ++ R L +GP Sbjct: 220 KYFEGCMPFEVMAER----------GRKTL---------------------LFGPMKPVG 248 Query: 278 IEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRP 337 +ED + G+R + L + + G T L Q + I+ IPGLE V+I+R Sbjct: 249 LEDP--KTGKRPYAVVQLRQDDAAGTLYNIVGFQTHLKWGAQKEVIKLIPGLENVDIVRY 306 Query: 338 GYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKL 396 G +IN P L E + AGQ+ G GY E+AA GLVAGIN A K Sbjct: 307 GVMHRNTFINSPDVLNEKYELISQPNIQFAGQMTGVEGYVESAASGLVAGINLAHKILGK 366 Query: 397 DCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTP 448 + F R ++ IG M + S A+ + +P NA+ L P Sbjct: 367 GEVVFPR-ETMIGSMA-------------YYISHAKNNKNFQPMNANFGLLP 404 >gi|51245821|ref|YP_065705.1| tRNA (uracil-5-)-methyltransferase Gid [Desulfotalea psychrophila LSv54] gi|81641897|sp|Q6ALS7|TRMFO_DESPS RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|50876858|emb|CAG36698.1| probable glucose-inhibited division protein [Desulfotalea psychrophila LSv54] Length = 444 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 43/119 (36%), Positives = 61/119 (51%), Gaps = 12/119 (10%) Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFP-TLET 357 G T + YP Q + R IPG+E V +R G +I EL TL+ Sbjct: 283 GFQTKMTYPE----------QKRIFRMIPGMENVEFVRLGSIHRNTFICAPELLADTLQI 332 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 KK L LAGQ++G GY E+AA GL+AGIN+AR++ + + + +G M+ LT Sbjct: 333 KKRPDLLLAGQLSGVEGYIESAAMGLLAGINAARRAMGEELVS-PPAEMALGAMVGHLT 390 Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust. Identities = 37/126 (29%), Positives = 55/126 (43%), Gaps = 5/126 (3%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +N VI+IGGG AG EAA AA G L+ K +P +G L + +R Sbjct: 1 MNNMNKVIIIGGGLAGSEAAWQAANRGCQVELVDMKPEKYSPAHSSPLLGELVCSNSLRS 60 Query: 62 IDALD--GLMGRVADAAGIQFRVLNVKKGPAVRGPRTQA-DRELYRLAMQREILSQENLD 118 D GLM R + +++V AV + A DR+ + A+ + S N+ Sbjct: 61 NDPTSAVGLMKR--EMRFFNSLIMDVADSTAVPAGKALAVDRDKFAEAITARLESHPNIS 118 Query: 119 VIQGEV 124 + EV Sbjct: 119 ISHREV 124 >gi|30263836|ref|NP_846213.1| tRNA (uracil-5-)-methyltransferase Gid [Bacillus anthracis str. Ames] gi|47529260|ref|YP_020609.1| tRNA (uracil-5-)-methyltransferase Gid [Bacillus anthracis str. 'Ames Ancestor'] gi|49186682|ref|YP_029934.1| tRNA (uracil-5-)-methyltransferase Gid [Bacillus anthracis str. Sterne] gi|165873313|ref|ZP_02217918.1| gid protein [Bacillus anthracis str. A0488] gi|167642030|ref|ZP_02400260.1| gid protein [Bacillus anthracis str. A0193] gi|170709359|ref|ZP_02899773.1| gid protein [Bacillus anthracis str. A0389] gi|177655997|ref|ZP_02937124.1| gid protein [Bacillus anthracis str. A0174] gi|227813260|ref|YP_002813269.1| tRNA:m(5)U-54 methyltransferase [Bacillus anthracis str. CDC 684] gi|229602681|ref|YP_002868070.1| tRNA:m(5)U-54 methyltransferase [Bacillus anthracis str. A0248] gi|254735870|ref|ZP_05193576.1| tRNA (uracil-5-)-methyltransferase Gid [Bacillus anthracis str. Western North America USA6153] gi|254751201|ref|ZP_05203240.1| tRNA (uracil-5-)-methyltransferase Gid [Bacillus anthracis str. Vollum] gi|254759316|ref|ZP_05211341.1| tRNA (uracil-5-)-methyltransferase Gid [Bacillus anthracis str. Australia 94] gi|33301123|sp|Q81WK3|TRMFO_BACAN RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|254789165|sp|C3P5N4|TRMFO_BACAA RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|254789166|sp|C3L795|TRMFO_BACAC RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|30258480|gb|AAP27699.1| tRNA:m(5)U-54 methyltransferase [Bacillus anthracis str. Ames] gi|47504408|gb|AAT33084.1| gid protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49180609|gb|AAT55985.1| gid protein [Bacillus anthracis str. Sterne] gi|164710951|gb|EDR16523.1| gid protein [Bacillus anthracis str. A0488] gi|167510010|gb|EDR85426.1| gid protein [Bacillus anthracis str. A0193] gi|170125733|gb|EDS94646.1| gid protein [Bacillus anthracis str. A0389] gi|172079896|gb|EDT65004.1| gid protein [Bacillus anthracis str. A0174] gi|227006782|gb|ACP16525.1| tRNA:m(5)U-54 methyltransferase [Bacillus anthracis str. CDC 684] gi|229267089|gb|ACQ48726.1| tRNA:m(5)U-54 methyltransferase [Bacillus anthracis str. A0248] Length = 434 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + ++ IPGLE I+R G +IN P L PT + K+ LF AG Sbjct: 279 GFQTHLKWGPQKEVLQLIPGLENAEIVRYGVMHRNTFINSPNLLRPTYQYKQRDDLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GL+AGIN+AR Sbjct: 339 QMTGVEGYVESAASGLLAGINAAR 362 >gi|30021920|ref|NP_833551.1| tRNA (uracil-5-)-methyltransferase Gid [Bacillus cereus ATCC 14579] gi|229047518|ref|ZP_04193108.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus AH676] gi|229111303|ref|ZP_04240856.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus Rock1-15] gi|229129108|ref|ZP_04258081.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus BDRD-Cer4] gi|33301121|sp|Q819X4|TRMFO_BACCR RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|29897476|gb|AAP10752.1| Glucose inhibited division protein A [Bacillus cereus ATCC 14579] gi|228654345|gb|EEL10210.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus BDRD-Cer4] gi|228672079|gb|EEL27370.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus Rock1-15] gi|228723765|gb|EEL75120.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus AH676] Length = 434 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + ++ IPGLE I+R G +IN P L PT + K+ LF AG Sbjct: 279 GFQTHLKWGPQKEVLQLIPGLENAEIVRYGVMHRNTFINSPNLLRPTYQYKQRDDLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GL+AGIN+AR Sbjct: 339 QMTGVEGYVESAASGLLAGINAAR 362 >gi|255029341|ref|ZP_05301292.1| tRNA (uracil-5-)-methyltransferase Gid [Listeria monocytogenes LO28] Length = 259 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 43/110 (39%), Positives = 58/110 (52%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE I+R G +IN P L PT + K + LF AG Sbjct: 103 GFQTHLKWGEQKRVFGMIPGLENAEIVRYGVMHRNTFINSPTVLEPTYQLKTRNDLFFAG 162 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+AA GL AGIN+A + + + F T++ IG + +TS Sbjct: 163 QMTGVEGYVESAASGLAAGINAANFIQEKELVVFP-TETAIGSLAHYITS 211 >gi|218231463|ref|YP_002368633.1| tRNA (uracil-5-)-methyltransferase Gid [Bacillus cereus B4264] gi|228922586|ref|ZP_04085886.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228954108|ref|ZP_04116137.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228960048|ref|ZP_04121712.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus thuringiensis serovar pakistani str. T13001] gi|229071330|ref|ZP_04204553.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus F65185] gi|229081087|ref|ZP_04213597.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus Rock4-2] gi|229146403|ref|ZP_04274774.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus BDRD-ST24] gi|229152031|ref|ZP_04280226.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus m1550] gi|229180108|ref|ZP_04307452.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus 172560W] gi|229192001|ref|ZP_04318971.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus ATCC 10876] gi|296504327|ref|YP_003666027.1| tRNA (uracil-5-)-methyltransferase Gid [Bacillus thuringiensis BMB171] gi|226707905|sp|B7HDV5|TRMFO_BACC4 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|218159420|gb|ACK59412.1| gid protein [Bacillus cereus B4264] gi|228591552|gb|EEK49401.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus ATCC 10876] gi|228603317|gb|EEK60794.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus 172560W] gi|228631380|gb|EEK88014.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus m1550] gi|228637036|gb|EEK93495.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus BDRD-ST24] gi|228702131|gb|EEL54607.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus Rock4-2] gi|228711784|gb|EEL63736.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus F65185] gi|228799564|gb|EEM46517.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus thuringiensis serovar pakistani str. T13001] gi|228805674|gb|EEM52264.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228837015|gb|EEM82356.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|296325379|gb|ADH08307.1| tRNA (uracil-5-)-methyltransferase Gid [Bacillus thuringiensis BMB171] Length = 434 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + ++ IPGLE I+R G +IN P L PT + K+ LF AG Sbjct: 279 GFQTHLKWGPQKEVLQLIPGLENAEIVRYGVMHRNTFINSPNLLRPTYQYKQRDDLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GL+AGIN+AR Sbjct: 339 QMTGVEGYVESAASGLLAGINAAR 362 >gi|306833468|ref|ZP_07466595.1| tRNA:M(5)U-54 methyltransferase [Streptococcus bovis ATCC 700338] gi|304424238|gb|EFM27377.1| tRNA:M(5)U-54 methyltransferase [Streptococcus bovis ATCC 700338] Length = 445 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 1/97 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE +R G Y++ P L T T++ LF AG Sbjct: 289 GFQTHLKWGEQKRVFRMIPGLENAEFVRYGVMHRNSYMDSPNLLTETFATRQNPDLFFAG 348 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 Q+ G GY E+AA GLVAGIN+ R+ + + F +T Sbjct: 349 QMTGVEGYVESAASGLVAGINAVRRFKGEEVVIFPQT 385 >gi|229019027|ref|ZP_04175868.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus AH1273] gi|229025273|ref|ZP_04181693.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus AH1272] gi|228736026|gb|EEL86601.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus AH1272] gi|228742267|gb|EEL92426.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus AH1273] Length = 434 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + ++ IPGLE I+R G +IN P L PT + K+ LF AG Sbjct: 279 GFQTHLKWGPQKEVLQLIPGLENAEIVRYGVMHRNTFINSPNLLRPTYQYKQRDDLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GL+AGIN+AR Sbjct: 339 QMTGVEGYVESAASGLLAGINAAR 362 >gi|163941570|ref|YP_001646454.1| tRNA (uracil-5-)-methyltransferase Gid [Bacillus weihenstephanensis KBAB4] gi|229134639|ref|ZP_04263449.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus BDRD-ST196] gi|229168571|ref|ZP_04296294.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus AH621] gi|205830323|sp|A9VT70|TRMFO_BACWK RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|163863767|gb|ABY44826.1| gid protein [Bacillus weihenstephanensis KBAB4] gi|228614977|gb|EEK72079.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus AH621] gi|228648900|gb|EEL04925.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus BDRD-ST196] Length = 434 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + ++ IPGLE I+R G +IN P L PT + K+ LF AG Sbjct: 279 GFQTHLKWGPQKEVLQLIPGLENAEIVRYGVMHRNTFINSPNLLRPTYQYKQRDDLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GL+AGIN+AR Sbjct: 339 QMTGVEGYVESAASGLLAGINAAR 362 >gi|254721982|ref|ZP_05183771.1| tRNA (uracil-5-)-methyltransferase Gid [Bacillus anthracis str. A1055] Length = 434 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + ++ IPGLE I+R G +IN P L PT + K+ LF AG Sbjct: 279 GFQTHLKWGPQKEVLQLIPGLENAEIVRYGVMHRNTFINSPNLLRPTYQYKQRDDLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GL+AGIN+AR Sbjct: 339 QMTGVEGYVESAASGLLAGINAAR 362 >gi|228986975|ref|ZP_04147101.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228772753|gb|EEM21193.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 434 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + ++ IPGLE I+R G +IN P L PT + K+ LF AG Sbjct: 279 GFQTHLKWGPQKEVLQLIPGLENAEIVRYGVMHRNTFINSPNLLRPTYQYKQRDDLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GL+AGIN+AR Sbjct: 339 QMTGVEGYVESAASGLLAGINAAR 362 >gi|229197942|ref|ZP_04324657.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus m1293] gi|228585521|gb|EEK43624.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus m1293] Length = 434 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + ++ IPGLE I+R G +IN P L PT + K+ LF AG Sbjct: 279 GFQTHLKWGPQKEVLQLIPGLENAEIVRYGVMHRNTFINSPNLLRPTYQYKQRDDLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GL+AGIN+AR Sbjct: 339 QMTGVEGYVESAASGLLAGINAAR 362 >gi|47570333|ref|ZP_00240978.1| gid protein [Bacillus cereus G9241] gi|47552998|gb|EAL11404.1| gid protein [Bacillus cereus G9241] Length = 434 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + ++ IPGLE I+R G +IN P L PT + K+ LF AG Sbjct: 279 GFQTHLKWGPQKEVLQLIPGLENAEIVRYGVMHRNTFINSPNLLRPTYQYKQRDDLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GL+AGIN+AR Sbjct: 339 QMTGVEGYVESAASGLLAGINAAR 362 >gi|315640712|ref|ZP_07895814.1| tRNA:M(5)U-54 methyltransferase [Enterococcus italicus DSM 15952] gi|315483467|gb|EFU73961.1| tRNA:M(5)U-54 methyltransferase [Enterococcus italicus DSM 15952] Length = 464 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 41/104 (39%), Positives = 57/104 (54%), Gaps = 2/104 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFP-TLETKKISGLFLAG 367 G T L Q + R IPGLE I+R G ++N EL T +++ LF AG Sbjct: 291 GFQTHLKWGEQKRVFRMIPGLENAEIVRYGVMHRNSFMNAPELLQQTYQSRLRDDLFFAG 350 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 Q+ G GY E+AA GLVAG+N+AR + + I F + ++ IG M Sbjct: 351 QMTGVEGYVESAASGLVAGMNAARLAKGQEPIIFPQ-ETAIGSM 393 >gi|229162768|ref|ZP_04290725.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus R309803] gi|228620650|gb|EEK77519.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus R309803] Length = 434 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + ++ IPGLE I+R G +IN P L PT + K+ LF AG Sbjct: 279 GFQTHLKWGPQKEVLQLIPGLENAEIVRYGVMHRNTFINSPNLLRPTYQYKQRDDLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GL+AGIN+AR Sbjct: 339 QMTGVEGYVESAASGLLAGINAAR 362 >gi|218898985|ref|YP_002447396.1| gid protein [Bacillus cereus G9842] gi|228940920|ref|ZP_04103479.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228966777|ref|ZP_04127821.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus thuringiensis serovar sotto str. T04001] gi|228973849|ref|ZP_04134425.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228980439|ref|ZP_04140749.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus thuringiensis Bt407] gi|226707904|sp|B7IUJ1|TRMFO_BACC2 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|218544000|gb|ACK96394.1| gid protein [Bacillus cereus G9842] gi|228779259|gb|EEM27516.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus thuringiensis Bt407] gi|228785874|gb|EEM33877.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228792876|gb|EEM40434.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus thuringiensis serovar sotto str. T04001] gi|228818756|gb|EEM64822.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326941601|gb|AEA17497.1| tRNA (uracil-5-)-methyltransferase Gid [Bacillus thuringiensis serovar chinensis CT-43] Length = 434 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + ++ IPGLE I+R G +IN P L PT + K+ LF AG Sbjct: 279 GFQTHLKWGPQKEVLQLIPGLENAEIVRYGVMHRNTFINSPNLLRPTYQYKQRDDLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GL+AGIN+AR Sbjct: 339 QMTGVEGYVESAASGLLAGINAAR 362 >gi|49478916|ref|YP_037893.1| tRNA (uracil-5-)-methyltransferase Gid [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52141656|ref|YP_085173.1| tRNA (uracil-5-)-methyltransferase Gid [Bacillus cereus E33L] gi|170689656|ref|ZP_02880836.1| gid protein [Bacillus anthracis str. A0465] gi|196042357|ref|ZP_03109628.1| gid protein [Bacillus cereus NVH0597-99] gi|218904960|ref|YP_002452794.1| gid protein [Bacillus cereus AH820] gi|228916469|ref|ZP_04080035.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228928880|ref|ZP_04091912.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228947551|ref|ZP_04109841.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229092874|ref|ZP_04224008.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus Rock3-42] gi|229123346|ref|ZP_04252550.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus 95/8201] gi|229186072|ref|ZP_04313241.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus BGSC 6E1] gi|254683461|ref|ZP_05147321.1| tRNA (uracil-5-)-methyltransferase Gid [Bacillus anthracis str. CNEVA-9066] gi|254739604|ref|ZP_05197298.1| tRNA (uracil-5-)-methyltransferase Gid [Bacillus anthracis str. Kruger B] gi|301055322|ref|YP_003793533.1| glucose inhibited division protein A [Bacillus anthracis CI] gi|81170593|sp|Q6HEY3|TRMFO_BACHK RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|81686578|sp|Q636J4|TRMFO_BACCZ RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|226707903|sp|B7JJB0|TRMFO_BACC0 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|49330472|gb|AAT61118.1| glucose inhibited division protein A [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51975125|gb|AAU16675.1| glucose inhibited division protein A [Bacillus cereus E33L] gi|170666380|gb|EDT17163.1| gid protein [Bacillus anthracis str. A0465] gi|196026813|gb|EDX65449.1| gid protein [Bacillus cereus NVH0597-99] gi|218539529|gb|ACK91927.1| gid protein [Bacillus cereus AH820] gi|228597248|gb|EEK54899.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus BGSC 6E1] gi|228660122|gb|EEL15758.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus 95/8201] gi|228690496|gb|EEL44279.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus Rock3-42] gi|228812071|gb|EEM58402.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228830687|gb|EEM76292.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228843048|gb|EEM88130.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|300377491|gb|ADK06395.1| glucose inhibited division protein A [Bacillus cereus biovar anthracis str. CI] Length = 434 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + ++ IPGLE I+R G +IN P L PT + K+ LF AG Sbjct: 279 GFQTHLKWGPQKEVLQLIPGLENAEIVRYGVMHRNTFINSPNLLRPTYQYKQRDDLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GL+AGIN+AR Sbjct: 339 QMTGVEGYVESAASGLLAGINAAR 362 >gi|325125941|gb|ADY85271.1| Glucose-inhibited division protein [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 439 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y+ +P+ L + E KK GLF AG Sbjct: 279 GFQTHLKYGEQKRVFQMIPGLENARFVRYGKMHRNTYMASPEVLKASYEAKKRPGLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+A GLVAGIN+AR++ + + F T + +G M +T+ Sbjct: 339 QMTGVEGYVESAGSGLVAGINAAREALGQETVEFPVTTA-LGSMAHYITT 387 >gi|228909657|ref|ZP_04073480.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus thuringiensis IBL 200] gi|228849946|gb|EEM94777.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus thuringiensis IBL 200] Length = 434 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + ++ IPGLE I+R G +IN P L PT + K+ LF AG Sbjct: 279 GFQTHLKWGPQKEVLQLIPGLENAEIVRYGVMHRNTFINSPNLLRPTYQYKQRDDLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GL+AGIN+AR Sbjct: 339 QMTGVEGYVESAASGLLAGINAAR 362 >gi|229013015|ref|ZP_04170180.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus mycoides DSM 2048] gi|229061435|ref|ZP_04198780.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus AH603] gi|228717858|gb|EEL69506.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus AH603] gi|228748269|gb|EEL98129.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus mycoides DSM 2048] Length = 434 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + ++ IPGLE I+R G +IN P L PT + K+ LF AG Sbjct: 279 GFQTHLKWGPQKEVLQLIPGLENAEIVRYGVMHRNTFINSPNLLRPTYQYKQRDDLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GL+AGIN+AR Sbjct: 339 QMTGVEGYVESAASGLLAGINAAR 362 >gi|229157408|ref|ZP_04285486.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus ATCC 4342] gi|228626135|gb|EEK82884.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus ATCC 4342] Length = 434 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + ++ IPGLE I+R G +IN P L PT + K+ LF AG Sbjct: 279 GFQTHLKWGPQKEVLQLIPGLENAEIVRYGVMHRNTFINSPNLLRPTYQYKQRDDLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GL+AGIN+AR Sbjct: 339 QMTGVEGYVESAASGLLAGINAAR 362 >gi|222097277|ref|YP_002531334.1| tRNA (uracil-5-)-methyltransferase gid [Bacillus cereus Q1] gi|254789168|sp|B9IVC1|TRMFO_BACCQ RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|221241335|gb|ACM14045.1| gid protein [Bacillus cereus Q1] Length = 434 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + ++ IPGLE I+R G +IN P L PT + K+ LF AG Sbjct: 279 GFQTHLKWGPQKEVLQLIPGLENAEIVRYGVMHRNTFINSPNLLRPTYQYKQRDDLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GL+AGIN+AR Sbjct: 339 QMTGVEGYVESAASGLLAGINAAR 362 >gi|229031462|ref|ZP_04187462.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus AH1271] gi|228729751|gb|EEL80731.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus AH1271] Length = 434 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + ++ IPGLE I+R G +IN P L PT + K+ LF AG Sbjct: 279 GFQTHLKWGPQKEVLQLIPGLENAEIVRYGVMHRNTFINSPNLLRPTYQYKQRDDLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GL+AGIN+AR Sbjct: 339 QMTGVEGYVESAASGLLAGINAAR 362 >gi|229098301|ref|ZP_04229248.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus Rock3-29] gi|229117318|ref|ZP_04246696.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus Rock1-3] gi|228666218|gb|EEL21682.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus Rock1-3] gi|228685199|gb|EEL39130.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus Rock3-29] Length = 434 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + ++ IPGLE I+R G +IN P L PT + K+ LF AG Sbjct: 279 GFQTHLKWGPQKEVLQLIPGLENAEIVRYGVMHRNTFINSPNLLRPTYQYKQRDDLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GL+AGIN+AR Sbjct: 339 QMTGVEGYVESAASGLLAGINAAR 362 >gi|225865813|ref|YP_002751191.1| tRNA:m(5)U-54 methyltransferase [Bacillus cereus 03BB102] gi|228935146|ref|ZP_04097973.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|205830476|sp|A0RHK5|TRMFO_BACAH RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|254789167|sp|C1EP56|TRMFO_BACC3 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|225789627|gb|ACO29844.1| tRNA:m(5)U-54 methyltransferase [Bacillus cereus 03BB102] gi|228824511|gb|EEM70316.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 434 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + ++ IPGLE I+R G +IN P L PT + K+ LF AG Sbjct: 279 GFQTHLKWGPQKEVLQLIPGLENAEIVRYGVMHRNTFINSPNLLRPTYQYKQRDDLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GL+AGIN+AR Sbjct: 339 QMTGVEGYVESAASGLLAGINAAR 362 >gi|42782924|ref|NP_980171.1| tRNA (uracil-5-)-methyltransferase Gid [Bacillus cereus ATCC 10987] gi|217961252|ref|YP_002339820.1| tRNA (uracil-5-)-methyltransferase Gid [Bacillus cereus AH187] gi|229140474|ref|ZP_04269029.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus BDRD-ST26] gi|50400232|sp|Q732N8|TRMFO_BACC1 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|226707906|sp|B7HLG5|TRMFO_BACC7 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|42738851|gb|AAS42779.1| gid protein [Bacillus cereus ATCC 10987] gi|217064533|gb|ACJ78783.1| gid protein [Bacillus cereus AH187] gi|228643035|gb|EEK99311.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus BDRD-ST26] gi|324327729|gb|ADY22989.1| tRNA (uracil-5-)-methyltransferase Gid [Bacillus thuringiensis serovar finitimus YBT-020] Length = 434 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + ++ IPGLE I+R G +IN P L PT + K+ LF AG Sbjct: 279 GFQTHLKWGPQKEVLQLIPGLENAEIVRYGVMHRNTFINSPNLLRPTYQYKQRDDLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GL+AGIN+AR Sbjct: 339 QMTGVEGYVESAASGLLAGINAAR 362 >gi|313123912|ref|YP_004034171.1| methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmfo [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280475|gb|ADQ61194.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|325686015|gb|EGD28074.1| tRNA:M(5)U-54 methyltransferase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 439 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y+ +P+ L + E KK GLF AG Sbjct: 279 GFQTHLKYGEQKRVFQMIPGLENARFVRYGKMHRNTYMASPEVLKASYEAKKRPGLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+A GLVAGIN+AR++ + + F T + +G M +T+ Sbjct: 339 QMTGVEGYVESAGSGLVAGINAAREALGQETVEFPVTTA-LGSMAHYITT 387 >gi|104774159|ref|YP_619139.1| tRNA (uracil-5-)-methyltransferase Gid [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|123251897|sp|Q1G9V1|TRMFO_LACDA RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|103423240|emb|CAI98073.1| Glucose inhibited division protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 439 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y+ +P+ L + E KK GLF AG Sbjct: 279 GFQTHLKYGEQKRVFQMIPGLENARFVRYGKMHRNTYMASPEVLKASYEAKKRPGLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+A GLVAGIN+AR++ + + F T + +G M +T+ Sbjct: 339 QMTGVEGYVESAGSGLVAGINAAREALGQETVEFPVTTA-LGSMAHYITT 387 >gi|229174498|ref|ZP_04302030.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus MM3] gi|228609058|gb|EEK66348.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Bacillus cereus MM3] Length = 434 Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + ++ IPGLE I+R G +IN P L PT + K+ LF AG Sbjct: 279 GFQTHLKWGPQKEVLQLIPGLENAEIVRYGVMHRNTFINSPNLLRPTYQYKQRDDLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GL+AGIN+AR Sbjct: 339 QMTGVEGYVESAASGLLAGINAAR 362 >gi|253733511|ref|ZP_04867676.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus subsp. aureus TCH130] gi|253728565|gb|EES97294.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus subsp. aureus TCH130] Length = 435 Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 122/506 (24%), Positives = 192/506 (37%), Gaps = 107/506 (21%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGL----G 54 V VIG G AG EAA A+ G LI H T + C+ ++ G G Sbjct: 5 VNVIGAGLAGSEAAYQLAERGIKVNLIEMRPVKQTPAHHTDKFAELVCSNSLRGNALTNG 64 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L E+ L+ ++ AD A + PA G DR + + + + Sbjct: 65 VGVLKEEMRRLNSIIIEAADKARV----------PA--GGALAVDRHDFSGYITEVLKNH 112 Query: 115 ENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHI-GKLKI---- 169 EN+ +I E+ II+ T LTT T + ++ I GK ++ Sbjct: 113 ENITIINEEINAIPDGYTIIA-------------TGPLTTETLAQEIVDITGKDQLYFYD 159 Query: 170 PAGRMGDSPSNSLFNSFMKFDFDTGR------------LKTGTPARLDGKTIIWDKTEKQ 217 A + + S + ++K +D G A L+ + + EK+ Sbjct: 160 AAAPIIEKESIDMDKVYLKSRYDKGEAAYLNCPMTEDEFNRFYDAVLEAEVAPVNSFEKE 219 Query: 218 FADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPS 277 E +PF M ++ R L +GP Sbjct: 220 KYFEGCMPFEVMAER----------GRKTL---------------------LFGPMKPVG 248 Query: 278 IEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRP 337 +ED + G+R + L + + G T L Q + I+ IPGLE V+I+R Sbjct: 249 LEDP--KTGKRPYAVVQLRQDDAAGTLYNIVGFQTHLKWGAQKEVIKLIPGLENVDIVRY 306 Query: 338 GYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKL 396 G +IN P L E + AGQ+ G GY E+AA GLVAGIN A K Sbjct: 307 GVMHRNTFINSPDVLNEKYELISQPNIQFAGQMTGVEGYVESAASGLVAGINLAHKILGK 366 Query: 397 DCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGC- 455 + F R ++ IG M + S A+ + +P NA+ L P L Sbjct: 367 GEVVFPR-ETMIGSMA-------------YYISHAKNNKNFQPMNANFGLLP---SLETR 409 Query: 456 IGERRQKRFAKYIQEYNFLRSLLKSL 481 I +++++ A+ + ++L + K+L Sbjct: 410 IKDKKERYEAQATRALDYLENFKKTL 435 >gi|116514252|ref|YP_813158.1| tRNA (uracil-5-)-methyltransferase Gid [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|122275016|sp|Q04A02|TRMFO_LACDB RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|116093567|gb|ABJ58720.1| tRNA uridine 5-carboxymethylaminomethyl modification FAD-utilizing enzyme [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 439 Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y+ +P+ L + E KK GLF AG Sbjct: 279 GFQTHLKYGEQKRVFQMIPGLENARFVRYGKMHRNTYMASPEVLKASYEAKKRPGLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+A GLVAGIN+AR++ + + F T + +G M +T+ Sbjct: 339 QMTGVEGYVESAGSGLVAGINAAREALGQETVEFPVTTA-LGSMAHYITT 387 >gi|238853069|ref|ZP_04643461.1| tRNA:M(5)U-54 methyltransferase [Lactobacillus gasseri 202-4] gi|238834317|gb|EEQ26562.1| tRNA:M(5)U-54 methyltransferase [Lactobacillus gasseri 202-4] Length = 438 Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 40/110 (36%), Positives = 60/110 (54%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE +R G YI +P+ L E +K +GLF AG Sbjct: 279 GFQTHLKYGEQKRVFSMIPGLENAKFVRYGKMHRNTYIASPEVLNANYEARKQAGLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+A GL+AGIN+AR++ + + F ++ + +G M +T+ Sbjct: 339 QMTGVEGYVESAGSGLIAGINAAREALGEETLVFPKSTA-LGSMAHYITT 387 >gi|300812248|ref|ZP_07092686.1| tRNA:M(5)U-54 methyltransferase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496762|gb|EFK31846.1| tRNA:M(5)U-54 methyltransferase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 439 Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y+ +P+ L + E KK GLF AG Sbjct: 279 GFQTHLKYGEQKRVFQMIPGLENARFVRYGKMHRNTYMASPEVLKASYEAKKRPGLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+A GLVAGIN+AR++ + + F T + +G M +T+ Sbjct: 339 QMTGVEGYVESAGSGLVAGINAAREALGQETVEFPVTTA-LGSMAHYITT 387 >gi|71903531|ref|YP_280334.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus pyogenes MGAS6180] gi|71802626|gb|AAX71979.1| glucose inhibited division protein A [Streptococcus pyogenes MGAS6180] Length = 464 Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 107/423 (25%), Positives = 165/423 (39%), Gaps = 74/423 (17%) Query: 10 VIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGG----LGKG 56 VIG G AG EAA AK G L HKT+ + C+ + G G Sbjct: 27 VIGAGLAGSEAAYQIAKRGIPVKLYEMRGVKATPQHKTTNFAELVCSNSFRGDSLTNAVG 86 Query: 57 HLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQEN 116 L E+ LD ++ R +A + PA G DRE Y ++ E+ + Sbjct: 87 LLKEEMRRLDSIIMRNGEANRV----------PA--GGAMAVDREGYAKSVTAELENHPL 134 Query: 117 LDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGD 176 ++VI+ E+ TE + D+++ +T LT+ KI A GD Sbjct: 135 IEVIRDEI----TE--------IPDDAITVIATGPLTSDALAE--------KIHALNGGD 174 Query: 177 SPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTII----WDKTEKQFADERLIPFSFMT-- 230 F +D + T +D + +DK E + + + FM Sbjct: 175 G--------FYFYDAAAPIIDKST---IDMSKVYLKSRYDKGEAAYLNCPMTKEEFMAFH 223 Query: 231 DKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKS--YGPRYCPSIEDKIVRFGER 288 D +TN + E + E + + + IK+ YGP +E G R Sbjct: 224 DALTNAE-EAPLNA--FEKEKYFEGCMPIEVMAKRGIKTMLYGPMKPVGLEYPDDYTGPR 280 Query: 289 NGH------QIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIE 342 +G + L + + G T L Q + + IPGLE +R G Sbjct: 281 DGEFKTPYAVVQLRQDNAAGSLYNIVGFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHR 340 Query: 343 YDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICF 401 Y++ P L T +++ LF AGQ+ G GY E+AA GLVAG N+AR + + + F Sbjct: 341 NSYMDSPNLLTETFQSRNNPNLFFAGQMTGVEGYVESAASGLVAGTNAARLFKREEALVF 400 Query: 402 SRT 404 +T Sbjct: 401 PQT 403 >gi|47097537|ref|ZP_00235074.1| gid protein [Listeria monocytogenes str. 1/2a F6854] gi|254828639|ref|ZP_05233326.1| gid protein [Listeria monocytogenes FSL N3-165] gi|254898559|ref|ZP_05258483.1| tRNA (uracil-5-)-methyltransferase Gid [Listeria monocytogenes J0161] gi|254936277|ref|ZP_05267974.1| gid protein [Listeria monocytogenes F6900] gi|47014085|gb|EAL05081.1| gid protein [Listeria monocytogenes str. 1/2a F6854] gi|258601038|gb|EEW14363.1| gid protein [Listeria monocytogenes FSL N3-165] gi|258608866|gb|EEW21474.1| gid protein [Listeria monocytogenes F6900] Length = 434 Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 43/110 (39%), Positives = 58/110 (52%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE I+R G +IN P L PT + K + LF AG Sbjct: 278 GFQTHLKWGEQKRVFGMIPGLENAEIVRYGVMHRNTFINSPTVLEPTYQLKTRNDLFFAG 337 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+AA GL AGIN+A + + + F T++ IG + +TS Sbjct: 338 QMTGVEGYVESAASGLAAGINAANFVQEKELVVFP-TETAIGSLAHYITS 386 >gi|254829967|ref|ZP_05234622.1| tRNA (uracil-5-)-methyltransferase Gid [Listeria monocytogenes 10403S] gi|255025704|ref|ZP_05297690.1| tRNA (uracil-5-)-methyltransferase Gid [Listeria monocytogenes FSL J2-003] gi|284801661|ref|YP_003413526.1| tRNA (uracil-5-)-methyltransferase Gid [Listeria monocytogenes 08-5578] gi|284994803|ref|YP_003416571.1| tRNA (uracil-5-)-methyltransferase Gid [Listeria monocytogenes 08-5923] gi|284057223|gb|ADB68164.1| tRNA (uracil-5-)-methyltransferase Gid [Listeria monocytogenes 08-5578] gi|284060270|gb|ADB71209.1| tRNA (uracil-5-)-methyltransferase Gid [Listeria monocytogenes 08-5923] Length = 434 Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 43/110 (39%), Positives = 58/110 (52%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE I+R G +IN P L PT + K + LF AG Sbjct: 278 GFQTHLKWGEQKRVFGMIPGLENAEIVRYGVMHRNTFINSPTVLEPTYQLKTRNDLFFAG 337 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+AA GL AGIN+A + + + F T++ IG + +TS Sbjct: 338 QMTGVEGYVESAASGLAAGINAANFVQEKELVVFP-TETAIGSLAHYITS 386 >gi|313638167|gb|EFS03423.1| tRNA:M(5)U-54 methyltransferase [Listeria seeligeri FSL S4-171] Length = 434 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 43/110 (39%), Positives = 58/110 (52%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE I+R G +IN P L PT + K + LF AG Sbjct: 278 GFQTHLKWGEQKRVFSMIPGLENAEIVRYGVMHRNTFINSPTVLEPTYQLKSRNDLFFAG 337 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+AA GL AGIN+A + + I F + ++ IG + +TS Sbjct: 338 QMTGVEGYVESAASGLAAGINAANFVEEKELIIFPK-ETAIGSLAHYITS 386 >gi|191638399|ref|YP_001987565.1| tRNA (uracil-5-)-methyltransferase Gid [Lactobacillus casei BL23] gi|190712701|emb|CAQ66707.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gid [Lactobacillus casei BL23] gi|327382428|gb|AEA53904.1| tRNA:M(5)U-54 methyltransferase [Lactobacillus casei LC2W] gi|327385627|gb|AEA57101.1| tRNA:M(5)U-54 methyltransferase [Lactobacillus casei BD-II] Length = 439 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 52/156 (33%), Positives = 75/156 (48%), Gaps = 17/156 (10%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE V I+R G ++ +P L PT +K+ LF AG Sbjct: 277 GFQTHLKWGEQKRVFRLIPGLENVQIVRYGVMHRNTFMKSPVVLEPTYASKRRPDLFFAG 336 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 Q+ G GY E+AA GL+AG N+AR + + F T T+ G + Y Sbjct: 337 QMTGVEGYVESAASGLIAGTNAARMALGETPLIFPET-----------TAMGSMAHYITH 385 Query: 428 TSRAEYRISLRPDNADNRLTP-IGMKLGCIGERRQK 462 TS + +P NA+ + P + +K+ ER Q+ Sbjct: 386 TSAHHF----QPMNANFGIMPALTVKVRNKKERNQQ 417 >gi|46199379|ref|YP_005046.1| tRNA (uracil-5-)-methyltransferase Gid [Thermus thermophilus HB27] gi|81405714|sp|Q72IQ5|TRMFO_THET2 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|46197004|gb|AAS81419.1| glucose inhibited division protein A [Thermus thermophilus HB27] Length = 443 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 40/110 (36%), Positives = 61/110 (55%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + I+ IPGLE I+R G Y+N P+ L TLE ++ GL+ AG Sbjct: 276 GFQTGLKWPEQKRLIQMIPGLENAEIVRYGVMHRNTYLNAPRLLGETLEFREAEGLYAAG 335 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 + G GY E+AA G +AG+N+AR++ L + +S +G ++ L + Sbjct: 336 VLAGVEGYLESAATGFLAGLNAARRALGLPPVA-PPEESMLGGLVRYLAT 384 >gi|227890786|ref|ZP_04008591.1| tRNA (uracil-5-)-methyltransferase Gid [Lactobacillus salivarius ATCC 11741] gi|227867195|gb|EEJ74616.1| tRNA (uracil-5-)-methyltransferase Gid [Lactobacillus salivarius ATCC 11741] gi|300214498|gb|ADJ78914.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO (Folate-dependent tRNA (uracil-5-)-methyltransferase) (Folate-dependent tRNA(M-5-U54)-methyltransferase) [Lactobacillus salivarius CECT 5713] Length = 436 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 49/152 (32%), Positives = 72/152 (47%), Gaps = 4/152 (2%) Query: 270 YGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGL 329 YGP +ED R G+ + L + D+ G T L Q + IPGL Sbjct: 241 YGPLKPVGLEDP--RTGKEPFAVVQLRQDNAAGDLYNIVGFQTHLKWGEQKRVFSMIPGL 298 Query: 330 EKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGIN 388 E +R G ++ +P+ + T +TKK LF AGQ+ G GY E+AA GL AG+N Sbjct: 299 ENARFVRYGVMHRNTFLCSPEVMQATYQTKKRPDLFFAGQMTGVEGYVESAASGLYAGLN 358 Query: 389 SARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 +AR + D + F ++ +G M +T V Sbjct: 359 AARIAQGKDPVIFPE-ETMMGAMAHYITHASV 389 >gi|253731870|ref|ZP_04866035.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253724280|gb|EES93009.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|302332857|gb|ADL23050.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus subsp. aureus JKD6159] gi|329733546|gb|EGG69874.1| tRNA:m(5)U-54 methyltransferase [Staphylococcus aureus subsp. aureus 21193] Length = 435 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 117/472 (24%), Positives = 175/472 (37%), Gaps = 103/472 (21%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGL----G 54 V VIG G AG EAA A+ G LI H T + C+ ++ G G Sbjct: 5 VNVIGAGLAGSEAAYQLAERGIKVNLIEMRPVKQTPAHHTDKFAELVCSNSLRGNALTNG 64 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L E+ L+ ++ AD A + PA G DR + + + + Sbjct: 65 VGVLKEEMRRLNSIIIEAADKARV----------PA--GGALAVDRHDFSGYITEVLKNH 112 Query: 115 ENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHI-GKLKI---- 169 EN+ VI E+ II+ T LTT T + ++ I GK ++ Sbjct: 113 ENITVINEEINAIPDGYTIIA-------------TGPLTTETLAQEIVDITGKDQLYFYD 159 Query: 170 PAGRMGDSPSNSLFNSFMKFDFDTGR------------LKTGTPARLDGKTIIWDKTEKQ 217 A + + S + ++K +D G A L+ + + EK+ Sbjct: 160 AAAPIIEKESIDMDKVYLKSRYDKGEAAYLNCPMTEDEFNRFYDAVLEAEVAPVNSFEKE 219 Query: 218 FADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPS 277 E +PF M ++ R L +GP Sbjct: 220 KYFEGCMPFEVMAER----------GRKTL---------------------LFGPMKPVG 248 Query: 278 IEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRP 337 +ED + G+R + L + + G T L Q + I+ IPGLE V+I+R Sbjct: 249 LEDP--KTGKRPYAVVQLRQDDAAGTLYNIVGFQTHLKWGAQKEVIKLIPGLENVDIVRY 306 Query: 338 GYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKL 396 G +IN P L E + AGQ+ G GY E+AA GLVAGIN A K Sbjct: 307 GVMHRNTFINSPDVLNEKYELISQPNIQFAGQMTGVEGYVESAASGLVAGINLAHKILGK 366 Query: 397 DCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTP 448 + F R ++ IG M + S A+ + +P NA+ L P Sbjct: 367 GEVVFPR-ETMIGSMA-------------YYISHAKNNKNFQPMNANFGLLP 404 >gi|205830455|sp|Q48TI1|TRMFO_STRPM RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase Length = 448 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 107/423 (25%), Positives = 165/423 (39%), Gaps = 74/423 (17%) Query: 10 VIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGG----LGKG 56 VIG G AG EAA AK G L HKT+ + C+ + G G Sbjct: 11 VIGAGLAGSEAAYQIAKRGIPVKLYEMRGVKATPQHKTTNFAELVCSNSFRGDSLTNAVG 70 Query: 57 HLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQEN 116 L E+ LD ++ R +A + PA G DRE Y ++ E+ + Sbjct: 71 LLKEEMRRLDSIIMRNGEA----------NRVPA--GGAMAVDREGYAKSVTAELENHPL 118 Query: 117 LDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGD 176 ++VI+ E+ TE + D+++ +T LT+ KI A GD Sbjct: 119 IEVIRDEI----TE--------IPDDAITVIATGPLTSDALAE--------KIHALNGGD 158 Query: 177 SPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTII----WDKTEKQFADERLIPFSFMT-- 230 F +D + T +D + +DK E + + + FM Sbjct: 159 G--------FYFYDAAAPIIDKST---IDMSKVYLKSRYDKGEAAYLNCPMTKEEFMAFH 207 Query: 231 DKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKS--YGPRYCPSIEDKIVRFGER 288 D +TN + E + E + + + IK+ YGP +E G R Sbjct: 208 DALTNAE-EAPLNA--FEKEKYFEGCMPIEVMAKRGIKTMLYGPMKPVGLEYPDDYTGPR 264 Query: 289 NGH------QIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIE 342 +G + L + + G T L Q + + IPGLE +R G Sbjct: 265 DGEFKTPYAVVQLRQDNAAGSLYNIVGFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHR 324 Query: 343 YDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICF 401 Y++ P L T +++ LF AGQ+ G GY E+AA GLVAG N+AR + + + F Sbjct: 325 NSYMDSPNLLTETFQSRNNPNLFFAGQMTGVEGYVESAASGLVAGTNAARLFKREEALVF 384 Query: 402 SRT 404 +T Sbjct: 385 PQT 387 >gi|226313078|ref|YP_002772972.1| tRNA (uracil-5-)-methyltransferase [Brevibacillus brevis NBRC 100599] gi|254789169|sp|C0ZFA9|TRMFO_BREBN RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|226096026|dbj|BAH44468.1| tRNA (uracil-5-)-methyltransferase [Brevibacillus brevis NBRC 100599] Length = 437 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 39/84 (46%), Positives = 47/84 (55%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE I+R G +IN PK L PT + K LF AG Sbjct: 279 GFQTHLKWPDQKRVFSLIPGLENCEIVRYGVMHRNTFINSPKLLKPTYQYKDRETLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GL+AGIN+AR Sbjct: 339 QMTGVEGYVESAASGLLAGINAAR 362 >gi|254852670|ref|ZP_05242018.1| tRNA (uracil-5-)-methyltransferase Gid [Listeria monocytogenes FSL R2-503] gi|300765312|ref|ZP_07075296.1| gid protein [Listeria monocytogenes FSL N1-017] gi|258605988|gb|EEW18596.1| tRNA (uracil-5-)-methyltransferase Gid [Listeria monocytogenes FSL R2-503] gi|300513995|gb|EFK41058.1| gid protein [Listeria monocytogenes FSL N1-017] Length = 434 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 43/110 (39%), Positives = 58/110 (52%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE I+R G +IN P L PT + K + LF AG Sbjct: 278 GFQTHLKWGEQKRVFGMIPGLENAEIVRYGVMHRNTFINSPTVLEPTYQLKTRNDLFFAG 337 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+AA GL AGIN+A + + + F T++ IG + +TS Sbjct: 338 QMTGVEGYVESAASGLAAGINAANFVEEKELVVFP-TETAIGSLAHYITS 386 >gi|238603528|ref|XP_002395973.1| hypothetical protein MPER_03877 [Moniliophthora perniciosa FA553] gi|215467627|gb|EEB96903.1| hypothetical protein MPER_03877 [Moniliophthora perniciosa FA553] Length = 95 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 36/70 (51%), Positives = 43/70 (61%), Gaps = 5/70 (7%) Query: 168 KIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFS 227 K PAGR+ ++PS L S F GRL+TGTPARLDGKTI + KQ D+ IPFS Sbjct: 12 KFPAGRINEAPSIGLSASLQAAGFKLGRLQTGTPARLDGKTINFTNLTKQVGDKEPIPFS 71 Query: 228 FMTDKITNRQ 237 F+ NRQ Sbjct: 72 FL-----NRQ 76 >gi|293596526|ref|ZP_06684243.1| gid protein [Listeria monocytogenes J2818] gi|293589912|gb|EFF98246.1| gid protein [Listeria monocytogenes J2818] Length = 363 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 43/110 (39%), Positives = 58/110 (52%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE I+R G +IN P L PT + K + LF AG Sbjct: 207 GFQTHLKWGEQKRVFGMIPGLENAEIVRYGVMHRNTFINSPTVLEPTYQLKTRNDLFFAG 266 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+AA GL AGIN+A + + + F T++ IG + +TS Sbjct: 267 QMTGVEGYVESAASGLAAGINAANFVQEKELVVFP-TETAIGSLAHYITS 315 >gi|171779421|ref|ZP_02920385.1| hypothetical protein STRINF_01266 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282038|gb|EDT47469.1| hypothetical protein STRINF_01266 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 445 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 41/109 (37%), Positives = 57/109 (52%), Gaps = 2/109 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE +R G Y++ P L T T++ LF AG Sbjct: 289 GFQTHLKWGEQKRVFRMIPGLENAEFVRYGVMHRNSYMDSPNLLTETFATRQNPNLFFAG 348 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 Q+ G GY E+AA GLVAGIN+ R+ + + F +T + IG + +T Sbjct: 349 QMTGVEGYVESAASGLVAGINAVRRFKGEEPVIFPQTTA-IGALPHYIT 396 >gi|15673213|ref|NP_267387.1| tRNA (uracil-5-)-methyltransferase Gid [Lactococcus lactis subsp. lactis Il1403] gi|26006775|sp|Q9CG79|TRMFO_LACLA RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|12724202|gb|AAK05329.1|AE006355_4 glucose inhibited division protein GidC [Lactococcus lactis subsp. lactis Il1403] gi|326406771|gb|ADZ63842.1| uracil-5-tRNA-methyltransferase Gid [Lactococcus lactis subsp. lactis CV56] Length = 447 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 37/97 (38%), Positives = 52/97 (53%), Gaps = 1/97 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +++K LF AG Sbjct: 288 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLKQTFQSRKQENLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 Q+ G GY E+AA GLVAGIN+ + N + + F +T Sbjct: 348 QMTGVEGYVESAASGLVAGINAVKLFNDEEVVIFPKT 384 >gi|330685680|gb|EGG97321.1| tRNA:m(5)U-54 methyltransferase [Staphylococcus epidermidis VCU121] Length = 435 Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 113/463 (24%), Positives = 177/463 (38%), Gaps = 85/463 (18%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGLG---- 54 V V+G G AG EAA A+ G LI H T + C+ ++ G Sbjct: 5 VNVVGAGLAGSEAAYQLAERGIKVNLIEMRPVKQTPAHHTDKFAELVCSNSLRGNALTNA 64 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L E+ LD L+ + AD A + PA G DR + + + + Sbjct: 65 VGVLKEEMRRLDSLIIQAADKARV----------PA--GGALAVDRHDFAGYITDTLRNH 112 Query: 115 ENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHI-GKLKI---- 169 N+ V+ EV II+ T LTT + ++ I GK ++ Sbjct: 113 PNVTVLNQEVHSIPEGYTIIA-------------TGPLTTENLAQEIVDITGKDQLYFYD 159 Query: 170 PAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM 229 A + + S + ++K +D G + + TE++F Sbjct: 160 AAAPIIEKDSIDMDKVYLKSRYDKG----------EAAYLNCPMTEEEF----------- 198 Query: 230 TDKITNRQIECGITRTN-LETHRIIMENIKHSAIYSGDIKS--YGPRYCPSIEDKIVRFG 286 D+ N +E + N E + + + K+ +GP +ED + G Sbjct: 199 -DRFYNAVLEAEVAPVNEFEKEKYFEGCMPFEVMAERGRKTLLFGPMKPVGLEDP--KTG 255 Query: 287 ERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI 346 +R + L + + G T L Q + I+ IPGLE V+I+R G +I Sbjct: 256 KRPFAVVQLRQDDAAGTLYNIVGFQTHLKWGAQKEVIKLIPGLENVDIVRYGVMHRNTFI 315 Query: 347 N-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTD 405 N P L E ++ AGQ+ G GY E+AA GLV+GIN A K + F R + Sbjct: 316 NSPDVLNEKYELIGHENIYFAGQMTGVEGYVESAASGLVSGINLAHKLLDKGEVIFPR-E 374 Query: 406 SYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTP 448 + IG M + S A+ + +P NA+ L P Sbjct: 375 TMIGSMA-------------YYISHAKNEKNFQPMNANFGLLP 404 >gi|320546745|ref|ZP_08041056.1| tRNA:M(5)U-54 methyltransferase [Streptococcus equinus ATCC 9812] gi|320448624|gb|EFW89356.1| tRNA:M(5)U-54 methyltransferase [Streptococcus equinus ATCC 9812] Length = 445 Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 41/109 (37%), Positives = 57/109 (52%), Gaps = 2/109 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE +R G Y++ P L T T++ LF AG Sbjct: 289 GFQTHLKWGEQKRVFRMIPGLENAEFVRYGVMHRNSYMDSPNLLTETFATRQNPNLFFAG 348 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 Q+ G GY E+AA GLVAGIN+ R+ + + F +T + IG + +T Sbjct: 349 QMTGVEGYVESAASGLVAGINAVRRFKGEEPVIFPQTTA-IGALPHYIT 396 >gi|281491736|ref|YP_003353716.1| tRNA (uracil-5-)-methyltransferase Gid [Lactococcus lactis subsp. lactis KF147] gi|281375450|gb|ADA64960.1| tRNA (uracil-5-)-methyltransferase Gid [Lactococcus lactis subsp. lactis KF147] Length = 447 Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/97 (38%), Positives = 52/97 (53%), Gaps = 1/97 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +++K LF AG Sbjct: 288 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLKQTFQSRKQENLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 Q+ G GY E+AA GLVAGIN+ + N + + F +T Sbjct: 348 QMTGVEGYVESAASGLVAGINAVKLFNDEEVVIFPKT 384 >gi|218295704|ref|ZP_03496500.1| gid protein [Thermus aquaticus Y51MC23] gi|218243863|gb|EED10390.1| gid protein [Thermus aquaticus Y51MC23] Length = 444 Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 56/182 (30%), Positives = 88/182 (48%), Gaps = 17/182 (9%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + I+ IPGLE I+R G Y+N P+ L TL+ K+ GLF AG Sbjct: 276 GFQTGLKWPEQKRLIQMIPGLENAEIVRYGVMHRNTYLNAPRLLRETLDFKEAEGLFAAG 335 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 + G GY E+AA G +AG+N+AR+ L+ + S +G ++ L Sbjct: 336 VLAGVEGYLESAATGFLAGLNAARRVLGLEPLVPPEA-SMLGGLVRFLA----------- 383 Query: 428 TSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKN 487 T+ E + +P NA+ L P G E+RQ + + ++ + S LK + +++ Sbjct: 384 TANPE---NFQPMNANWGLVPPVEGRGK-KEKRQAMYRRGLEAFAQWLSALKPPLPGARS 439 Query: 488 LS 489 L Sbjct: 440 LQ 441 Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 56/130 (43%), Gaps = 25/130 (19%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGLG---- 54 V V+GGG AG EAA ++G L H T + C+ ++GG G Sbjct: 4 VNVVGGGLAGSEAAWTLLRMGVPVRLFEMRPKRMTPAHATDRFAEIVCSNSLGGEGETQA 63 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 KG L E+ L L+ A+AA + PA G DRE++ + + + Sbjct: 64 KGLLQAEMRLLGSLVMEAAEAARV----------PA--GGALAVDREVFSGFITERLQAH 111 Query: 115 ENLDVIQGEV 124 L+V++ EV Sbjct: 112 PLLEVVREEV 121 >gi|294500947|ref|YP_003564647.1| tRNA:m(5)U-54 methyltransferase [Bacillus megaterium QM B1551] gi|294350884|gb|ADE71213.1| tRNA:m(5)U-54 methyltransferase [Bacillus megaterium QM B1551] Length = 434 Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/84 (42%), Positives = 49/84 (58%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE ++R G +IN PK L PT + ++ LF AG Sbjct: 279 GFQTHLKWGAQKEVLSLIPGLENAEVVRYGVMHRNTFINSPKLLKPTYQYRERDDLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GL+AG+N+AR Sbjct: 339 QMTGVEGYVESAASGLMAGMNAAR 362 >gi|323701840|ref|ZP_08113510.1| gid protein [Desulfotomaculum nigrificans DSM 574] gi|323533144|gb|EGB23013.1| gid protein [Desulfotomaculum nigrificans DSM 574] Length = 443 Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 43/110 (39%), Positives = 57/110 (51%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPG+ +R G YIN P L PTL+ K +FLAG Sbjct: 280 GFQTNLKWGEQKRVFSLIPGMANAEFVRYGVMHRNTYINSPTLLKPTLQLKSQERIFLAG 339 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 QI G GY E+AA GLVAGIN+AR + + F ++ G ++ +TS Sbjct: 340 QITGVEGYVESAAAGLVAGINAARMAKGQAPVEFPPETAH-GALLHYITS 388 >gi|169837932|ref|ZP_02871120.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [candidate division TM7 single-cell isolate TM7a] Length = 99 Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 32/68 (47%), Positives = 45/68 (66%) Query: 150 VVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTI 209 VVL TGTFLRG+++IG ++ GRMG+ ++ L +S GR KTGTP RLD +T+ Sbjct: 4 VVLATGTFLRGLLYIGDKRVKGGRMGELSADDLTSSLKSLGLKMGRFKTGTPPRLDIRTL 63 Query: 210 IWDKTEKQ 217 +K E+Q Sbjct: 64 NLEKLEEQ 71 >gi|295706293|ref|YP_003599368.1| tRNA:m(5)U-54 methyltransferase [Bacillus megaterium DSM 319] gi|294803952|gb|ADF41018.1| tRNA:m(5)U-54 methyltransferase [Bacillus megaterium DSM 319] Length = 434 Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/84 (42%), Positives = 49/84 (58%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE ++R G +IN PK L PT + ++ LF AG Sbjct: 279 GFQTHLKWGAQKEVLSLIPGLENAEVVRYGVMHRNTFINSPKLLKPTYQYRERDDLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GL+AG+N+AR Sbjct: 339 QMTGVEGYVESAASGLMAGMNAAR 362 >gi|255018080|ref|ZP_05290206.1| tRNA (uracil-5-)-methyltransferase Gid [Listeria monocytogenes FSL F2-515] Length = 320 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 43/110 (39%), Positives = 58/110 (52%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE I+R G +IN P L PT + K + LF AG Sbjct: 189 GFQTHLKWGEQKRVFGMIPGLENAEIVRYGVMHRNTFINSPTVLEPTYQLKTRNDLFFAG 248 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+AA GL AGIN+A + + + F T++ IG + +TS Sbjct: 249 QMTGVEGYVESAASGLAAGINAANFVQEKELVVFP-TETAIGSLAHYITS 297 >gi|16803316|ref|NP_464801.1| tRNA (uracil-5-)-methyltransferase Gid [Listeria monocytogenes EGD-e] gi|224499053|ref|ZP_03667402.1| tRNA (uracil-5-)-methyltransferase Gid [Listeria monocytogenes Finland 1988] gi|224501779|ref|ZP_03670086.1| tRNA (uracil-5-)-methyltransferase Gid [Listeria monocytogenes FSL R2-561] gi|26006765|sp|Q8Y7K1|TRMFO_LISMO RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|16410692|emb|CAC99354.1| gid [Listeria monocytogenes EGD-e] Length = 434 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 43/110 (39%), Positives = 58/110 (52%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE I+R G +IN P L PT + K + LF AG Sbjct: 278 GFQTHLKWGEQKRVFGMIPGLENAEIVRYGVMHRNTFINSPTVLEPTYQLKTRNDLFFAG 337 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+AA GL AGIN+A + + + F T++ IG + +TS Sbjct: 338 QMTGVEGYVESAASGLAAGINAANFIQEKELVVFP-TETAIGSLAHYITS 386 >gi|258404544|ref|YP_003197286.1| tRNA (uracil-5-)-methyltransferase Gid [Desulfohalobium retbaense DSM 5692] gi|257796771|gb|ACV67708.1| gid protein [Desulfohalobium retbaense DSM 5692] Length = 449 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 44/123 (35%), Positives = 58/123 (47%), Gaps = 11/123 (8%) Query: 269 SYGPRYCPSIEDKIVRFGERNGHQIF----LEPEGLNTDVVYPNGISTALPEEIQHQFIR 324 +YGP +ED R G Q F L PE + G T L Q + R Sbjct: 251 AYGPLKPVGLEDP------RTGKQAFAVVQLRPENAAKTMCNLVGFQTKLTYPEQKRVFR 304 Query: 325 TIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGL 383 IPGLE+ +R G ++N P+ L P LE + + G++LAGQI G GY E+AA G Sbjct: 305 MIPGLEQAEFVRMGSIHRNTFVNAPRVLLPHLELRDMPGVYLAGQITGVEGYVESAASGF 364 Query: 384 VAG 386 G Sbjct: 365 WLG 367 >gi|77415236|ref|ZP_00791226.1| glucose-inhibited division protein A [Streptococcus agalactiae 515] gi|77158714|gb|EAO70035.1| glucose-inhibited division protein A [Streptococcus agalactiae 515] Length = 120 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 41/102 (40%), Positives = 57/102 (55%), Gaps = 4/102 (3%) Query: 142 NSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTP 201 N +VV+TTGT LRG I +G LK +G S +L ++ + GR KTGTP Sbjct: 20 NQKFSAKSVVITTGTALRGEIILGDLKYSSGPNNSLASVTLADNLRDLGLEIGRFKTGTP 79 Query: 202 ARLDGKTIIWDKTEKQFADERLIPFSFMT---DKITNRQIEC 240 R+ +I ++KTE Q DE+ FSFM+ D IT+ Q+ C Sbjct: 80 PRVKASSINYEKTEIQPGDEQPNHFSFMSRDEDYITD-QVPC 120 >gi|223932160|ref|ZP_03624164.1| gid protein [Streptococcus suis 89/1591] gi|302023781|ref|ZP_07248992.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus suis 05HAS68] gi|330832814|ref|YP_004401639.1| gid protein [Streptococcus suis ST3] gi|223899141|gb|EEF65498.1| gid protein [Streptococcus suis 89/1591] gi|329307037|gb|AEB81453.1| gid protein [Streptococcus suis ST3] Length = 444 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 41/104 (39%), Positives = 55/104 (52%), Gaps = 2/104 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T TKK LF AG Sbjct: 288 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTFATKKNPNLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 Q+ G GY E+AA GLVAGIN+ R+ + + F +T + IG + Sbjct: 348 QMTGVEGYVESAASGLVAGINAVRRFRGEEPVIFPQTTA-IGAL 390 Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust. Identities = 38/128 (29%), Positives = 53/128 (41%), Gaps = 25/128 (19%) Query: 10 VIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGG----LGKG 56 VIG G AG EAA AK G L HKT + C+ + G G Sbjct: 8 VIGAGLAGSEAAYQIAKRGIPVKLYEMRGVKPTPQHKTDKFAELVCSNSFRGDSLTNAVG 67 Query: 57 HLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQEN 116 L E+ LD ++ R +A + PA G DRE + A+ EI + Sbjct: 68 LLKEEMRRLDSIIMRAGEAHRV----------PA--GGAMAMDRENFSQAVTDEIHNHPL 115 Query: 117 LDVIQGEV 124 ++VI+GE+ Sbjct: 116 IEVIRGEI 123 >gi|125624095|ref|YP_001032578.1| tRNA (uracil-5-)-methyltransferase Gid [Lactococcus lactis subsp. cremoris MG1363] gi|166989561|sp|A2RKQ0|TRMFO_LACLM RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|124492903|emb|CAL97864.1| GidC protein [Lactococcus lactis subsp. cremoris MG1363] gi|300070868|gb|ADJ60268.1| tRNA (uracil-5-)-methyltransferase Gid [Lactococcus lactis subsp. cremoris NZ9000] Length = 448 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/96 (38%), Positives = 52/96 (54%), Gaps = 1/96 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +++K LF AG Sbjct: 288 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLKQTFQSRKQENLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSR 403 Q+ G GY E+AA GLVAGIN+A+ N + + F + Sbjct: 348 QMTGVEGYVESAASGLVAGINAAKLFNDEEVVIFPK 383 >gi|205830465|sp|Q1JGS2|TRMFO_STRPD RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase Length = 448 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 1/97 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T ++++ LF AG Sbjct: 291 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLTETFQSRRNPNLFFAG 350 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 Q+ G GY E+AA GLVAGIN+AR + + + F +T Sbjct: 351 QMTGVEGYVESAASGLVAGINAARLFKREEALIFPQT 387 >gi|94990516|ref|YP_598616.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus pyogenes MGAS10270] gi|94544024|gb|ABF34072.1| Glucose inhibited division protein A [Streptococcus pyogenes MGAS10270] Length = 464 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 1/97 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T ++++ LF AG Sbjct: 307 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLTETFQSRRNPNLFFAG 366 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 Q+ G GY E+AA GLVAGIN+AR + + + F +T Sbjct: 367 QMTGVEGYVESAASGLVAGINAARLFKREEALIFPQT 403 >gi|289434560|ref|YP_003464432.1| glucose inhibited division gid protein [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170804|emb|CBH27346.1| glucose inhibited division gid protein [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 434 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 43/110 (39%), Positives = 58/110 (52%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE I+R G +IN P L PT + K + LF AG Sbjct: 278 GFQTHLKWGEQKRVFGMIPGLENAEIVRYGVMHRNTFINSPTVLEPTYQLKSRNDLFFAG 337 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+AA GL AGIN+A + + I F + ++ IG + +TS Sbjct: 338 QMTGVEGYVESAASGLAAGINAANFVEEKELIIFPK-ETAIGSLAHYITS 386 >gi|58337279|ref|YP_193864.1| tRNA (uracil-5-)-methyltransferase Gid [Lactobacillus acidophilus NCFM] gi|227903865|ref|ZP_04021670.1| tRNA (uracil-5-)-methyltransferase Gid [Lactobacillus acidophilus ATCC 4796] gi|81170598|sp|Q5FKE1|TRMFO_LACAC RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|58254596|gb|AAV42833.1| glucose-inhibited division protein [Lactobacillus acidophilus NCFM] gi|227868256|gb|EEJ75677.1| tRNA (uracil-5-)-methyltransferase Gid [Lactobacillus acidophilus ATCC 4796] Length = 438 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 18/157 (11%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE +R G Y+ +P L + E K GLF AG Sbjct: 279 GFQTHLKFGEQKRVFSMIPGLENARFVRYGKMHRNTYMASPNVLTASYEAKNRPGLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 Q+ G GY E+A GLVAGIN+AR++ + + F + ++ +G M + +T Sbjct: 339 QMTGVEGYVESAGSGLVAGINAAREALGKETVAFPK-NTALGSMANYVT----------- 386 Query: 428 TSRAEYRISLRPDNADNRLTPI--GMKLGCIGERRQK 462 T+ A++ +P NA L P G K+ ER +K Sbjct: 387 TTSAKH---FQPMNASFALLPALEGKKIRKKRERHEK 420 >gi|301300761|ref|ZP_07206945.1| tRNA:M(5)U-54 methyltransferase [Lactobacillus salivarius ACS-116-V-Col5a] gi|300851611|gb|EFK79311.1| tRNA:M(5)U-54 methyltransferase [Lactobacillus salivarius ACS-116-V-Col5a] Length = 436 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 49/152 (32%), Positives = 72/152 (47%), Gaps = 4/152 (2%) Query: 270 YGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGL 329 YGP +ED R G+ + L + D+ G T L Q + IPGL Sbjct: 241 YGPLKPVGLEDP--RTGKEPFAVVQLRQDNAAGDLYNIVGFQTHLKWGEQKRVFSMIPGL 298 Query: 330 EKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGIN 388 E +R G ++ +P+ + T +TKK LF AGQ+ G GY E+AA GL AG+N Sbjct: 299 ENARFVRYGVMHRNTFLCSPEVMQATYQTKKRLDLFFAGQMTGVEGYVESAASGLYAGLN 358 Query: 389 SARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 +AR + D + F ++ +G M +T V Sbjct: 359 AARIAQGKDPVIFPE-ETMMGAMAHYITHASV 389 >gi|90961698|ref|YP_535614.1| tRNA (uracil-5-)-methyltransferase Gid [Lactobacillus salivarius UCC118] gi|122449073|sp|Q1WU04|TRMFO_LACS1 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|90820892|gb|ABD99531.1| Glucose inhibited division protein A [Lactobacillus salivarius UCC118] Length = 436 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 49/152 (32%), Positives = 72/152 (47%), Gaps = 4/152 (2%) Query: 270 YGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGL 329 YGP +ED R G+ + L + D+ G T L Q + IPGL Sbjct: 241 YGPLKPVGLEDP--RTGKEPFAVVQLRQDNAAGDLYNIVGFQTHLKWGEQKRVFSMIPGL 298 Query: 330 EKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGIN 388 E +R G ++ +P+ + T +TKK LF AGQ+ G GY E+AA GL AG+N Sbjct: 299 ENARFVRYGVMHRNTFLCSPEVMQATYQTKKRLDLFFAGQMTGVEGYVESAASGLYAGLN 358 Query: 389 SARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 +AR + D + F ++ +G M +T V Sbjct: 359 AARIAQGKDPVIFPE-ETMMGAMAHYITHASV 389 >gi|327183489|gb|AEA31936.1| tRNA (uracil-5-)-methyltransferase Gid [Lactobacillus amylovorus GRL 1118] Length = 438 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 40/110 (36%), Positives = 59/110 (53%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE +R G Y+ +P L + E + GLF AG Sbjct: 279 GFQTHLKFGEQKRVFSMIPGLENARFVRYGKMHRNTYMASPDVLTASYEAQNRPGLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+A GLVAGIN+AR++ + + F + D+ +G M + +T+ Sbjct: 339 QMTGVEGYVESAGSGLVAGINAAREALGEETVAFPK-DTALGSMANYITT 387 >gi|315038212|ref|YP_004031780.1| tRNA (uracil-5-)-methyltransferase Gid [Lactobacillus amylovorus GRL 1112] gi|325956666|ref|YP_004292078.1| tRNA (uracil-5-)-methyltransferase Gid [Lactobacillus acidophilus 30SC] gi|312276345|gb|ADQ58985.1| tRNA (uracil-5-)-methyltransferase Gid [Lactobacillus amylovorus GRL 1112] gi|325333231|gb|ADZ07139.1| tRNA (uracil-5-)-methyltransferase Gid [Lactobacillus acidophilus 30SC] Length = 438 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 40/110 (36%), Positives = 59/110 (53%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE +R G Y+ +P L + E + GLF AG Sbjct: 279 GFQTHLKFGEQKRVFSMIPGLENARFVRYGKMHRNTYMASPDVLTASYEAQNRPGLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+A GLVAGIN+AR++ + + F + D+ +G M + +T+ Sbjct: 339 QMTGVEGYVESAGSGLVAGINAAREALGEETVAFPK-DTALGSMANYITT 387 >gi|116872709|ref|YP_849490.1| tRNA (uracil-5-)-methyltransferase Gid [Listeria welshimeri serovar 6b str. SLCC5334] gi|123458432|sp|A0AI79|TRMFO_LISW6 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|116741587|emb|CAK20711.1| glucose inhibited division protein A [Listeria welshimeri serovar 6b str. SLCC5334] Length = 434 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 44/110 (40%), Positives = 56/110 (50%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE I+R G +IN P L PT + K LF AG Sbjct: 278 GFQTHLKWGEQKRVFGLIPGLENAEIVRYGVMHRNTFINSPTVLEPTYQLKTRDDLFFAG 337 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+AA GL AGIN+A + + I F +S IG + +TS Sbjct: 338 QMTGVEGYVESAASGLAAGINAANFVQEKETIVFP-AESAIGSLAHYITS 386 >gi|49483414|ref|YP_040638.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus subsp. aureus MRSA252] gi|282903806|ref|ZP_06311694.1| tRNA:M(5)U-54 methyltransferase [Staphylococcus aureus subsp. aureus C160] gi|282905569|ref|ZP_06313424.1| tRNA:m(5)U-54 methyltransferase [Staphylococcus aureus subsp. aureus Btn1260] gi|282908544|ref|ZP_06316374.1| tRNA:m(5)U-54 methyltransferase [Staphylococcus aureus subsp. aureus WW2703/97] gi|283957994|ref|ZP_06375445.1| tRNA:M(5)U-54 methyltransferase [Staphylococcus aureus subsp. aureus A017934/97] gi|295427738|ref|ZP_06820370.1| tRNA:m(5)U-54 methyltransferase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297591304|ref|ZP_06949942.1| (FADH(2)-oxidizing) [Staphylococcus aureus subsp. aureus MN8] gi|81170601|sp|Q6GHI4|TRMFO_STAAR RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|49241543|emb|CAG40229.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus MRSA252] gi|282327606|gb|EFB57889.1| tRNA:m(5)U-54 methyltransferase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282330861|gb|EFB60375.1| tRNA:m(5)U-54 methyltransferase [Staphylococcus aureus subsp. aureus Btn1260] gi|282595424|gb|EFC00388.1| tRNA:M(5)U-54 methyltransferase [Staphylococcus aureus subsp. aureus C160] gi|283790143|gb|EFC28960.1| tRNA:M(5)U-54 methyltransferase [Staphylococcus aureus subsp. aureus A017934/97] gi|295128096|gb|EFG57730.1| tRNA:m(5)U-54 methyltransferase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297576190|gb|EFH94906.1| (FADH(2)-oxidizing) [Staphylococcus aureus subsp. aureus MN8] Length = 435 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 116/472 (24%), Positives = 175/472 (37%), Gaps = 103/472 (21%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGL----G 54 V VIG G AG EAA ++ G LI H T + C+ ++ G G Sbjct: 5 VNVIGAGLAGSEAAYQLSERGIKVNLIEMRPVKQTPAHHTDKFAELVCSNSLRGNALTNG 64 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L E+ L+ ++ AD A + PA G DR + + + + Sbjct: 65 VGVLKEEMRRLNSIIIEAADKARV----------PA--GGALAVDRHDFSGYITETLKNH 112 Query: 115 ENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHI-GKLKI---- 169 EN+ VI E+ II+ T LTT T + ++ I GK ++ Sbjct: 113 ENITVINEEINAIPDGYTIIA-------------TGPLTTETLAQEIVDITGKDQLYFYD 159 Query: 170 PAGRMGDSPSNSLFNSFMKFDFDTGR------------LKTGTPARLDGKTIIWDKTEKQ 217 A + + S + ++K +D G A L+ + + EK+ Sbjct: 160 AAAPIIEKESIDMDKVYLKSRYDKGEAAYLNCPMTEDEFNRFYDAVLEAEAAPVNSFEKE 219 Query: 218 FADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPS 277 E +PF M ++ R L +GP Sbjct: 220 KYFEGCMPFEVMAER----------GRKTL---------------------LFGPMKPVG 248 Query: 278 IEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRP 337 +ED + G+R + L + + G T L Q + I+ IPGLE V+I+R Sbjct: 249 LEDP--KTGKRPYAVVQLRQDDAAGTLYNIVGFQTHLKWGAQKEVIKLIPGLENVDIVRY 306 Query: 338 GYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKL 396 G +IN P L E + AGQ+ G GY E+AA GLVAGIN A K Sbjct: 307 GVMHRNTFINSPDVLNEKYELISQPNIQFAGQMTGVEGYVESAASGLVAGINLAHKILGK 366 Query: 397 DCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTP 448 + F R ++ IG M + S A+ + +P NA+ L P Sbjct: 367 GEVVFPR-ETMIGSMA-------------YYISHAKNNKNFQPMNANFGLLP 404 >gi|328946305|gb|EGG40449.1| tRNA:M(5)U-54 methyltransferase [Streptococcus sanguinis SK1087] Length = 444 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 39/97 (40%), Positives = 50/97 (51%), Gaps = 1/97 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +KK LF AG Sbjct: 288 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTFRSKKQPNLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 Q+ G GY E+AA GLVAGIN+AR + + F T Sbjct: 348 QMTGVEGYVESAASGLVAGINAARLFKGEEALVFPET 384 >gi|322389588|ref|ZP_08063137.1| tRNA:M(5)U-54 methyltransferase [Streptococcus parasanguinis ATCC 903] gi|321143714|gb|EFX39143.1| tRNA:M(5)U-54 methyltransferase [Streptococcus parasanguinis ATCC 903] Length = 444 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 43/109 (39%), Positives = 56/109 (51%), Gaps = 2/109 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +KK + LF AG Sbjct: 288 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTYRSKKQANLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 Q+ G GY E+AA GLVAGIN+AR + F T S IG + +T Sbjct: 348 QMTGVEGYVESAASGLVAGINAARLFKGEEAAIFPETTS-IGSLAHYIT 395 >gi|282850255|ref|ZP_06259634.1| tRNA:M(5)U-54 methyltransferase [Veillonella parvula ATCC 17745] gi|282579748|gb|EFB85152.1| tRNA:M(5)U-54 methyltransferase [Veillonella parvula ATCC 17745] Length = 438 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 105/423 (24%), Positives = 156/423 (36%), Gaps = 72/423 (17%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAI--GGL-- 53 +VIVIG G AG EAA A G L H+T + C+ ++ G + Sbjct: 5 NVIVIGAGLAGSEAAWQLANRGIHVDLYEMRPLKSSPAHQTDQFAELVCSNSLRAGNIEN 64 Query: 54 GKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILS 113 G L E+ L ++ ADA + PA G DR L+ + +++ S Sbjct: 65 AVGLLKEEMRRLGSIIMECADATAV----------PA--GGALAVDRHLFSEMVTKKVKS 112 Query: 114 QENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGR 173 N+ V EV TE TV+ +G + +K+ G Sbjct: 113 HPNITVHHEEVTEIPTE-----------------GTVIFASGPLTSEALG-DNIKVLTGE 154 Query: 174 MG----DSPSNSLFNSFMKFD--FDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFS 227 G D+ + + + +D F R G D + TE+++ + Sbjct: 155 TGFYFYDAAAPIVTAESLNYDKVFAASRYDKG-----DADYLNCPMTEEEYK-------A 202 Query: 228 FMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSG---DIKSYGPRYCPSIEDKIVR 284 F + T ++ + E I E I + D YGP + DK R Sbjct: 203 FWNELTTAEAVQP----KDFEK-EIYFEGCMPVEIMASRGEDTLRYGPLKPVGLVDK--R 255 Query: 285 FGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYD 344 E + + L E + G T L Q + IPGLE +R G Sbjct: 256 TNEESYAVVQLRKENKEGTMFNLVGFQTHLKWGEQKRVFGMIPGLENAEFVRYGVMHRNT 315 Query: 345 YINPKELF-PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSR 403 YIN EL + KK LF AGQ+ G GY E+AA GL+ G+ AR + I F + Sbjct: 316 YINSPELLNHAFQLKKEPRLFFAGQMTGVEGYLESAASGLMVGLQVARYLEEKPFIEFPK 375 Query: 404 TDS 406 T + Sbjct: 376 TTA 378 >gi|325689701|gb|EGD31705.1| tRNA:M(5)U-54 methyltransferase [Streptococcus sanguinis SK115] Length = 444 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 39/97 (40%), Positives = 50/97 (51%), Gaps = 1/97 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +KK LF AG Sbjct: 288 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTFRSKKQPNLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 Q+ G GY E+AA GLVAGIN+AR + + F T Sbjct: 348 QMTGVEGYVESAASGLVAGINAARLFKGEEALVFPET 384 >gi|324991150|gb|EGC23084.1| tRNA:M(5)U-54 methyltransferase [Streptococcus sanguinis SK353] Length = 444 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 107/422 (25%), Positives = 161/422 (38%), Gaps = 72/422 (17%) Query: 10 VIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGLGKGHLVR 60 VIG G AG EAA AK G L HKT+ + C+ ++ G Sbjct: 8 VIGAGLAGSEAAYQIAKRGIPVKLYEMRGVKSTPQHKTADFAELVCSNSLRG-------- 59 Query: 61 EIDALDGLMGRVADAAGIQFRVLN---VKKGPAVRGPRTQADRELYRLAMQREILSQENL 117 DAL +G + + + R L+ +K A R P A LA+ RE SQ Sbjct: 60 --DALTNAVGLLKE----EMRRLDSVILKSAEATRVPAGGA------LAVDREGFSQMVT 107 Query: 118 DVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 +++ T +I I + + + V+ TG + KI A GD Sbjct: 108 ELV--------TNHPLIEVIREEITEIPEDAITVIATGPLTSDAL---AEKIHALNGGDG 156 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTII----WDKTEKQFADERLIPFSFMT--D 231 F +D + T +D + +DK E + + + FM D Sbjct: 157 --------FYFYDAAAPIVDVNT---IDMTKVYLKSRYDKGEAAYLNAPMTKQEFMDFHD 205 Query: 232 KITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKS--YGPRYCPSIEDKIVRFGERN 289 + N + E + + E + + + IK+ YGP +E G R+ Sbjct: 206 ALVNAE-EAPLN--SFEKEKYFEGCMPIEVMAKRGIKTMLYGPMKPVGLEYPDDYQGPRD 262 Query: 290 GHQ------IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEY 343 G + L + + G T L Q + + IPGLE +R G Sbjct: 263 GEYKTPYAVVQLRQDNAAGSLYNIVGFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRN 322 Query: 344 DYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFS 402 Y++ P L T +KK LF +GQ+ G GY E+AA GLVAGIN+AR + + F Sbjct: 323 SYMDSPNLLEQTFRSKKQPNLFFSGQMTGVEGYVESAASGLVAGINAARLFKGEEALVFP 382 Query: 403 RT 404 T Sbjct: 383 ET 384 >gi|332361199|gb|EGJ39003.1| tRNA:M(5)U-54 methyltransferase [Streptococcus sanguinis SK1056] Length = 444 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 39/97 (40%), Positives = 50/97 (51%), Gaps = 1/97 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +KK LF AG Sbjct: 288 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTFRSKKQPNLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 Q+ G GY E+AA GLVAGIN+AR + + F T Sbjct: 348 QMTGVEGYVESAASGLVAGINAARLFKGEEALVFPET 384 >gi|327470032|gb|EGF15496.1| tRNA:M(5)U-54 methyltransferase [Streptococcus sanguinis SK330] Length = 444 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 39/97 (40%), Positives = 50/97 (51%), Gaps = 1/97 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +KK LF AG Sbjct: 288 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTFRSKKQPNLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 Q+ G GY E+AA GLVAGIN+AR + + F T Sbjct: 348 QMTGVEGYVESAASGLVAGINAARLFKGEEALVFPET 384 >gi|323351567|ref|ZP_08087221.1| tRNA:M(5)U-54 methyltransferase [Streptococcus sanguinis VMC66] gi|322122053|gb|EFX93779.1| tRNA:M(5)U-54 methyltransferase [Streptococcus sanguinis VMC66] Length = 444 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 39/97 (40%), Positives = 50/97 (51%), Gaps = 1/97 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +KK LF AG Sbjct: 288 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTFRSKKQPNLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 Q+ G GY E+AA GLVAGIN+AR + + F T Sbjct: 348 QMTGVEGYVESAASGLVAGINAARLFKGEEALVFPET 384 >gi|72382474|ref|YP_291829.1| tRNA (uracil-5-)-methyltransferase Gid [Prochlorococcus marinus str. NATL2A] gi|123621049|sp|Q46K52|TRMFO_PROMT RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|72002324|gb|AAZ58126.1| Gid protein [Prochlorococcus marinus str. NATL2A] Length = 467 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 62/205 (30%), Positives = 89/205 (43%), Gaps = 25/205 (12%) Query: 270 YGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGL 329 + PR+ + DK +R +R + L E + G T L Q + R IPGL Sbjct: 256 WDPRWG-DVNDKSIRRLKRAHAVVQLRQEDKAGKLWNLVGFQTNLKWGEQKRIFRMIPGL 314 Query: 330 EKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGIN 388 K IR G +I +PK + PTL+ LF AGQ+ GT GY A A G +AG N Sbjct: 315 SKAEFIRFGVMHRNTFIESPKLIEPTLQFTNRKTLFAAGQLTGTEGYAAAVAGGWLAGTN 374 Query: 389 SARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTP 448 +A + LD I + MI LT+ F S ++ SLR N N P Sbjct: 375 AALLAKGLDTITLPSS-----TMIGALTN---------FVSNSQ--ASLRVKNKKN-FQP 417 Query: 449 IGMKLGCIGE------RRQKRFAKY 467 + G + E +++R+ +Y Sbjct: 418 MPANFGILPELDIRVHNKRERYKEY 442 >gi|83319822|ref|YP_424450.1| tRNA (uracil-5-)-methyltransferase Gid [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|123535705|sp|Q2SS13|TMFO1_MYCCT RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO 1; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase 1; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase 1 gi|83283708|gb|ABC01640.1| glucose inhibited division protein [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 438 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 103/409 (25%), Positives = 163/409 (39%), Gaps = 84/409 (20%) Query: 8 VIVIGGGHAGCEAAAVAA------KLGASTALI---THKTSTIGSMSCNPAIGGL----G 54 V +IG G AGCEAA A +L LI KT+ + C+ Sbjct: 5 VKIIGAGLAGCEAAYFLANNDIQVELYEVKTLIKNEVQKTNNFAELVCSNTFRSQSLLNA 64 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L E+ L+ L+ ++AD+ I G LA+ RE S+ Sbjct: 65 AGILKAEMRRLNSLVIKIADSCKID-------------GDDA--------LAVDREDFSK 103 Query: 115 ENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIH-IGKLKIPAGR 173 + DVI+ E+N+ S + +N + +T LTT + IGK K+ Sbjct: 104 KLTDVIKNHPNITIIEQNV--SYIDDENDLTLIATGPLTTNELKEDIQRLIGKQKL---F 158 Query: 174 MGDSPSNSLFNSFMKFD--FDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD 231 D+ + + + F+ + +GR K GK I E++F F+ D Sbjct: 159 FMDASAPIITKDSIDFNKVYYSGRHK-------QGKYICCPLNEQEFN-------KFVDD 204 Query: 232 KITNRQIECGITRTNLETHRIIM----ENIKHSAIYSGDIKSYGPRYCPSIEDK------ 281 + Q++ E + I + I+ A S + GP ++ D+ Sbjct: 205 LVNAEQVQLK------EFEKSIFFKGCQPIEQLAKTSKKLLLKGPMSPNNLLDQNNQQPY 258 Query: 282 -IVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYA 340 +V+ + + G T++ +P Q + +TIPGLEK I+R G Sbjct: 259 AVVQLRQDDAKDSLYNMVGFQTNLKWPE----------QKRVFQTIPGLEKAKIVRYGVM 308 Query: 341 IEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGIN 388 + YIN PK L L+ + +F AGQI G GY E+A+ G+ A IN Sbjct: 309 HKNYYINSPKILNFKLQVIRKKNVFFAGQITGVEGYIESASSGIWAAIN 357 >gi|228475054|ref|ZP_04059782.1| tRNA:M(5)U-54 methyltransferase [Staphylococcus hominis SK119] gi|228271039|gb|EEK12427.1| tRNA:M(5)U-54 methyltransferase [Staphylococcus hominis SK119] Length = 435 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 119/499 (23%), Positives = 193/499 (38%), Gaps = 87/499 (17%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGL-- 53 S V VIG G AG EAA A+ G LI H T + C+ ++ G Sbjct: 2 SQTVNVIGAGLAGSEAAYQLAERGIKVNLIEMRPVKQTPAHHTDKFAELVCSNSLRGNAL 61 Query: 54 --GKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREI 111 G G L E+ LD L+ AD A + PA G DR + + + Sbjct: 62 TNGVGVLKEEMRRLDSLIIAAADKARV----------PA--GGALAVDRHDFAGYITDTL 109 Query: 112 LSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHI-GKLKI- 169 + N+ V+ E+ II+ T LTT + ++ I GK ++ Sbjct: 110 KNHPNVTVLNKEIHSIPEGHTIIA-------------TGPLTTENLAKEIVEITGKDQLY 156 Query: 170 ---PAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPF 226 A + + S + ++K +D G + + TE++F Sbjct: 157 FYDAAAPIIEKDSIDMDKVYLKSRYDKG----------EAAYLNCPMTEEEF-------- 198 Query: 227 SFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKS---YGPRYCPSIEDKIV 283 ++ + +E + N E + +G + +GP +ED Sbjct: 199 ----NRFYDAVLEAEVAPVNEFEKEKYFEGCMPFEVMAGRGRKTLLFGPMKPVGLEDP-- 252 Query: 284 RFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEY 343 + G+R + L + + G T L Q + I+ IPGLE V+I+R G Sbjct: 253 KTGKRPYAVVQLRQDDAAGTLYNIVGFQTHLKWGAQKEVIQLIPGLENVDIVRYGVMHRN 312 Query: 344 DYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFS 402 +IN P L E + AGQ+ G GY E+AA GLVAGIN A K + F Sbjct: 313 TFINSPDVLNEKYELINNDRIQFAGQMTGVEGYVESAASGLVAGINLAHKLLGKGEVIFP 372 Query: 403 RTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQK 462 R ++ IG M + S A+ + +P NA+ L P + I +++++ Sbjct: 373 R-ETMIGSMA-------------YYISHAKNEKNFQPMNANFGLLPSLDRR--IKDKKER 416 Query: 463 RFAKYIQEYNFLRSLLKSL 481 A+ + ++L + K+L Sbjct: 417 YEAQAYRALDYLENFKKTL 435 >gi|332360882|gb|EGJ38688.1| tRNA:M(5)U-54 methyltransferase [Streptococcus sanguinis SK49] Length = 444 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 39/97 (40%), Positives = 50/97 (51%), Gaps = 1/97 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +KK LF AG Sbjct: 288 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTFRSKKQPNLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 Q+ G GY E+AA GLVAGIN+AR + + F T Sbjct: 348 QMTGVEGYVESAASGLVAGINAARLFKGEEALVFPET 384 >gi|113953825|ref|YP_730348.1| tRNA (uracil-5-)-methyltransferase Gid [Synechococcus sp. CC9311] gi|123327861|sp|Q0IB24|TRMFO_SYNS3 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|113881176|gb|ABI46134.1| gid protein [Synechococcus sp. CC9311] Length = 459 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 47/146 (32%), Positives = 71/146 (48%), Gaps = 3/146 (2%) Query: 267 IKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTI 326 I + PR+ + D+ VR +R + L E + + G T L Q + +R I Sbjct: 253 IGLWDPRWG-DVNDRDVRRAKRAYAVVQLRQEDKDGRLWNLVGFQTNLKWGEQKRVLRLI 311 Query: 327 PGLEKVNIIRPGYAIEYDYINPKELF-PTLETKKISGLFLAGQINGTTGYEEAAAQGLVA 385 PGLE+ + +R G ++ EL PTL+ ++ L AGQI GT GY A A G +A Sbjct: 312 PGLEQADFVRFGVMHRNTFLEAPELLEPTLQFRRRPHLLAAGQITGTEGYAAAVAGGWLA 371 Query: 386 GINSARKSNKLDCICFSRTDSYIGVM 411 G N+AR + D + T + IG + Sbjct: 372 GTNAARLVHGHDPMQLPHT-TMIGAL 396 >gi|94988640|ref|YP_596741.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus pyogenes MGAS9429] gi|94992463|ref|YP_600562.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus pyogenes MGAS2096] gi|94542148|gb|ABF32197.1| glucose inhibited division protein A [Streptococcus pyogenes MGAS9429] gi|94545971|gb|ABF36018.1| Glucose inhibited division protein A [Streptococcus pyogenes MGAS2096] Length = 502 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/97 (38%), Positives = 52/97 (53%), Gaps = 1/97 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +++ LF AG Sbjct: 345 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLTETFQSRNNPNLFFAG 404 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 Q+ G GY E+AA GLVAGIN+AR + + + F +T Sbjct: 405 QMTGVEGYVESAASGLVAGINAARLFKREEALVFPQT 441 >gi|251782411|ref|YP_002996713.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242391040|dbj|BAH81499.1| glucose inhibited division protein A [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 464 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/97 (38%), Positives = 52/97 (53%), Gaps = 1/97 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +++ LF AG Sbjct: 307 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLTETFQSRSNPNLFFAG 366 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 Q+ G GY E+AA GLVAGIN+AR + + + F +T Sbjct: 367 QMTGVEGYVESAASGLVAGINAARLFKREEALVFPQT 403 >gi|151399991|gb|ABS11108.1| GidA [Vibrio cholerae] gi|151399994|gb|ABS11110.1| GidA [Vibrio cholerae] gi|151399996|gb|ABS11111.1| GidA [Vibrio cholerae] gi|151399999|gb|ABS11113.1| GidA [Vibrio cholerae] gi|151400002|gb|ABS11115.1| GidA [Vibrio cholerae] gi|151400005|gb|ABS11117.1| GidA [Vibrio cholerae] gi|151400008|gb|ABS11119.1| GidA [Vibrio mimicus] Length = 54 Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats. Identities = 31/53 (58%), Positives = 40/53 (75%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGL 53 + + ++DVIV+GGGHAG EAA AA+ G T L+TH T+G MSCNPAIGG+ Sbjct: 2 LYHETFDVIVVGGGHAGTEAALAAARTGQRTLLLTHNIDTLGQMSCNPAIGGI 54 >gi|320450937|ref|YP_004203033.1| tRNA:M(5)U-54 methyltransferase [Thermus scotoductus SA-01] gi|320151106|gb|ADW22484.1| tRNA:M(5)U-54 methyltransferase [Thermus scotoductus SA-01] Length = 437 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 41/110 (37%), Positives = 59/110 (53%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + I+ IPGLE I+R G Y+N P L TLE ++ GLF AG Sbjct: 276 GFQTGLKWPEQKRLIQMIPGLENAEIVRYGVMHRNTYLNAPLLLQETLEFREQEGLFAAG 335 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 + G GY E+AA G +AG+N+AR+ L + +S +G ++ L + Sbjct: 336 VLAGVEGYLESAATGFLAGLNAARRYQGLKPVA-PPEESMLGGLVRFLAT 384 >gi|218438815|ref|YP_002377144.1| tRNA (uracil-5-)-methyltransferase Gid [Cyanothece sp. PCC 7424] gi|218171543|gb|ACK70276.1| gid protein [Cyanothece sp. PCC 7424] Length = 446 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 41/110 (37%), Positives = 59/110 (53%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE+ +R G +IN P+ L+P+L+ K LF AG Sbjct: 282 GFQTNLKWGEQKRVFRLIPGLEEAEFVRMGVMHRNTFINSPQLLYPSLQFKSRPTLFAAG 341 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ GT GY A A G +AG N+AR LD + T + +G + + ++S Sbjct: 342 QLVGTEGYTAATAGGWLAGTNAARLVLGLDLVTIPVT-TMMGSLFEFISS 390 >gi|323127293|gb|ADX24590.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 448 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/99 (37%), Positives = 53/99 (53%), Gaps = 1/99 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +++ LF AG Sbjct: 291 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLTETFQSRNNPNLFFAG 350 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDS 406 Q+ G GY E+AA GLVAGIN+AR + + + F +T + Sbjct: 351 QMTGVEGYVESAASGLVAGINAARLFKREEALVFPQTTA 389 >gi|332366889|gb|EGJ44630.1| tRNA:M(5)U-54 methyltransferase [Streptococcus sanguinis SK1059] Length = 456 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 39/97 (40%), Positives = 50/97 (51%), Gaps = 1/97 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +KK LF AG Sbjct: 300 GFQTHLKWGDQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTFRSKKQPNLFFAG 359 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 Q+ G GY E+AA GLVAGIN+AR + + F T Sbjct: 360 QMTGVEGYVESAASGLVAGINAARLFKGEEALIFPET 396 >gi|205830461|sp|Q1JBP0|TRMFO_STRPB RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|205830464|sp|Q1JLM2|TRMFO_STRPC RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase Length = 448 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/97 (38%), Positives = 52/97 (53%), Gaps = 1/97 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +++ LF AG Sbjct: 291 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLTETFQSRNNPNLFFAG 350 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 Q+ G GY E+AA GLVAGIN+AR + + + F +T Sbjct: 351 QMTGVEGYVESAASGLVAGINAARLFKREEALVFPQT 387 >gi|118578966|ref|YP_900216.1| tRNA (uracil-5-)-methyltransferase Gid [Pelobacter propionicus DSM 2379] gi|205830314|sp|A1ALD8|TRMFO_PELPD RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|118501676|gb|ABK98158.1| gid protein [Pelobacter propionicus DSM 2379] Length = 454 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/113 (33%), Positives = 56/113 (49%), Gaps = 1/113 (0%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + RTIPGLE+ +R G +IN P L PT + + +F AG Sbjct: 279 GFQTKLTWPEQRRIFRTIPGLERAEFVRLGSMHRNTFINAPALLQPTQQLRSDPRIFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 QI G GY E+A G +AGI +AR + ++ +G ++ +T+ V Sbjct: 339 QITGVEGYVESAGSGFLAGITAARLLTGMPDPAVPPAETALGALVSHITNADV 391 >gi|16800383|ref|NP_470651.1| tRNA (uracil-5-)-methyltransferase Gid [Listeria innocua Clip11262] gi|26006768|sp|Q92C76|TRMFO_LISIN RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|16413788|emb|CAC96546.1| gid [Listeria innocua Clip11262] Length = 434 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 44/110 (40%), Positives = 57/110 (51%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE I+R G +IN P L PT + K + LF AG Sbjct: 278 GFQTHLKWGEQKRVFGLIPGLENAEIVRYGVMHRNTFINSPTVLEPTYQLKTRNDLFFAG 337 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+AA GL AGIN+A + I F +S IG + + +TS Sbjct: 338 QMTGVEGYVESAASGLAAGINAANFVQDKEPIVFP-PESAIGSLANYITS 386 >gi|331703493|ref|YP_004400180.1| methylene tetrahydrofolate tRNA (uracil 5 ) methyltransferase [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328802048|emb|CBW54202.1| Methylene tetrahydrofolate tRNA (uracil 5 ) methyltransferase [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 438 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 104/406 (25%), Positives = 158/406 (38%), Gaps = 78/406 (19%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGL----G 54 V +IG G AGCEAA A L KT+ + C+ Sbjct: 5 VKIIGAGLAGCEAAYFLANNNIQVELYEVKTLIKNEVQKTNNFAELVCSNTFRSQSLLNA 64 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L E+ L+ L+ ++AD+ I G LA+ RE S+ Sbjct: 65 AGILKAEMRRLNSLVIKIADSCKID-------------GDDA--------LAVDREDFSK 103 Query: 115 ENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIH-IGKLKIPAGR 173 + DVI+ EKN+ S + +N + +T LTT + IGK K+ Sbjct: 104 KLTDVIKNHPNITIIEKNV--SHIDDENDLTLIATGPLTTNELKEDIQRLIGKQKL---F 158 Query: 174 MGDSPSNSLFNSFMKFD--FDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD 231 D+ + + + F+ + +GR K GK I E++F F + Sbjct: 159 FMDASAPIITKDSIDFNKVYYSGRHK-------QGKYICCPLNEQEFN-------KFADN 204 Query: 232 KITNRQIECGITRTNLETHRIIM----ENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGE 287 I Q++ E + I + I+ A S + GP ++ D Sbjct: 205 LINAEQVQLK------EFEKSIFFKGCQPIEQLAKTSKKLLLKGPMSSNNLLD------- 251 Query: 288 RNGHQIF----LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEY 343 +N HQ + L + + G T L Q + +TIPGL+K I+R G + Sbjct: 252 QNNHQPYAVVQLRQDDAKDSLYNMVGFQTNLKWPEQKRVFQTIPGLQKAKIVRYGVMHKN 311 Query: 344 DYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGIN 388 YIN PK L L+ + +F AGQI G GY E+A+ G+ A IN Sbjct: 312 YYINSPKILNFKLQVMRKKNVFFAGQITGVEGYIESASSGIWAAIN 357 >gi|169839320|ref|ZP_02872508.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [candidate division TM7 single-cell isolate TM7a] Length = 57 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 29/55 (52%), Positives = 39/55 (70%) Query: 381 QGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRI 435 QG++AGIN+A K + R SYIG MIDDL +K + EPYRMFT+R+E+R+ Sbjct: 1 QGIIAGINAALKIKGEEPFILDRESSYIGTMIDDLINKELFEPYRMFTARSEFRL 55 >gi|254994488|ref|ZP_05276678.1| tRNA (uracil-5-)-methyltransferase Gid [Listeria monocytogenes FSL J2-064] Length = 252 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 42/110 (38%), Positives = 57/110 (51%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE I+R G +IN P L PT + K + LF AG Sbjct: 96 GFQTHLKWGEQKRVFGMIPGLENAEIVRYGVMHRNTFINSPTVLEPTYQLKTRNDLFFAG 155 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+AA GL AGIN+A + + + F ++ IG + +TS Sbjct: 156 QMTGVEGYVESAASGLAAGINAANFVEEKELVVFP-AETAIGSLAHYITS 204 >gi|306827332|ref|ZP_07460619.1| tRNA:M(5)U-54 methyltransferase [Streptococcus pyogenes ATCC 10782] gi|304430479|gb|EFM33501.1| tRNA:M(5)U-54 methyltransferase [Streptococcus pyogenes ATCC 10782] Length = 494 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/99 (37%), Positives = 53/99 (53%), Gaps = 1/99 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +++ LF AG Sbjct: 337 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLTETFQSRSNPNLFFAG 396 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDS 406 Q+ G GY E+AA GLVAGIN+AR + + + F +T + Sbjct: 397 QMTGVEGYVESAASGLVAGINAARLFKREEALIFPQTTA 435 >gi|313619214|gb|EFR90978.1| tRNA:M(5)U-54 methyltransferase [Listeria innocua FSL S4-378] Length = 428 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 44/110 (40%), Positives = 57/110 (51%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE I+R G +IN P L PT + K + LF AG Sbjct: 278 GFQTHLKWGEQKRVFGLIPGLENAEIVRYGVMHRNTFINSPTVLEPTYQLKTRNDLFFAG 337 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+AA GL AGIN+A + I F +S IG + + +TS Sbjct: 338 QMTGVEGYVESAASGLAAGINAANFVQDKEPIVFP-PESAIGSLANYITS 386 >gi|94994438|ref|YP_602536.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus pyogenes MGAS10750] gi|94547946|gb|ABF37992.1| Glucose inhibited division protein A [Streptococcus pyogenes MGAS10750] Length = 464 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/97 (38%), Positives = 52/97 (53%), Gaps = 1/97 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +++ LF AG Sbjct: 307 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLTETFQSRSNPNLFFAG 366 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 Q+ G GY E+AA GLVAGIN+AR + + + F +T Sbjct: 367 QMTGVEGYVESAASGLVAGINAARLFKREEALIFPQT 403 >gi|313623982|gb|EFR94081.1| tRNA:M(5)U-54 methyltransferase [Listeria innocua FSL J1-023] Length = 434 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 44/110 (40%), Positives = 57/110 (51%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE I+R G +IN P L PT + K + LF AG Sbjct: 278 GFQTHLKWGEQKRVFGLIPGLENAEIVRYGVMHRNTFINSPTVLEPTYQLKTRNDLFFAG 337 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+AA GL AGIN+A + I F +S IG + + +TS Sbjct: 338 QMTGVEGYVESAASGLAAGINAANFVQDKEPIVFP-PESAIGSLANYITS 386 >gi|242279775|ref|YP_002991904.1| gid protein [Desulfovibrio salexigens DSM 2638] gi|242122669|gb|ACS80365.1| gid protein [Desulfovibrio salexigens DSM 2638] Length = 440 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 107/426 (25%), Positives = 158/426 (37%), Gaps = 93/426 (21%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAI--GGLGK- 55 + VIGGG AGCE A AK L H + + C+ ++ G L Sbjct: 4 IAVIGGGLAGCECAMQLAKAEIQVVLYEMKPDKYSEAHHLPGLAELVCSNSLRSGELNTA 63 Query: 56 -GHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L +E++ALD ++ + A A + PA G DRE++ + EI Sbjct: 64 IGVLKKEMEALDSVLMKAAMKARV----------PA--GSALAVDREVFSKLVTEEIEQN 111 Query: 115 ENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFL-RGVIHIGKLKIPAGR 173 E + V++ E+ F+ D ++ S +V+ G G+ KI R Sbjct: 112 EFITVVRKEITSFD------------DPELVDFSKIVVCAGPLASEGLTESLMSKIGEQR 159 Query: 174 M----GDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFAD--------E 221 + +P S + M F R K D + TE+Q+ E Sbjct: 160 LYFYDAIAPIVSRDSVNMDVAFFGSRYKPE-----DDDYLNCPMTEEQYNSFIKELKEGE 214 Query: 222 RLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYC-----P 276 R++P F E H I+ A ++GP P Sbjct: 215 RVVPREF-----------------EKEIHFEGCLPIEEMADRGDMTLAFGPLKPVGLIDP 257 Query: 277 SIEDK---IVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVN 333 E++ +V+ N + G T + YP Q + R IPGLE V Sbjct: 258 RTEEQAYAVVQLRAENKDKTAFNLVGFQTKLKYPE----------QKRIFRMIPGLEDVE 307 Query: 334 IIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAG--INSA 390 +R G Y+N P+ L L K S + LAGQI G GY E+AA GL G + Sbjct: 308 FLRMGSIHRNTYVNAPEVLDEKLALKADSRIHLAGQITGVEGYLESAACGLWVGRMLAEQ 367 Query: 391 RKSNKL 396 K N+L Sbjct: 368 AKGNEL 373 >gi|56807499|ref|ZP_00365436.1| COG1206: NAD(FAD)-utilizing enzyme possibly involved in translation [Streptococcus pyogenes M49 591] Length = 317 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/97 (38%), Positives = 52/97 (53%), Gaps = 1/97 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +++ LF AG Sbjct: 160 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLTETFQSRSNPNLFFAG 219 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 Q+ G GY E+AA GLVAGIN+AR + + + F +T Sbjct: 220 QMTGVEGYVESAASGLVAGINAARLFKREEALIFPQT 256 >gi|139473747|ref|YP_001128463.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus pyogenes str. Manfredo] gi|166989569|sp|A2REF7|TRMFO_STRPG RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|134271994|emb|CAM30232.1| protein Gid homolog [Streptococcus pyogenes str. Manfredo] Length = 448 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/97 (38%), Positives = 52/97 (53%), Gaps = 1/97 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +++ LF AG Sbjct: 291 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLTETFQSRSNPNLFFAG 350 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 Q+ G GY E+AA GLVAGIN+AR + + + F +T Sbjct: 351 QMTGVEGYVESAASGLVAGINAARLFKREEALIFPQT 387 >gi|19746111|ref|NP_607247.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus pyogenes MGAS8232] gi|26006762|sp|Q8P106|TRMFO_STRP8 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|19748285|gb|AAL97746.1| putative glucose-inhibited division protein [Streptococcus pyogenes MGAS8232] Length = 448 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/97 (38%), Positives = 52/97 (53%), Gaps = 1/97 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +++ LF AG Sbjct: 291 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLTETFQSRSNPNLFFAG 350 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 Q+ G GY E+AA GLVAGIN+AR + + + F +T Sbjct: 351 QMTGVEGYVESAASGLVAGINAARLFKREEALIFPQT 387 >gi|314936588|ref|ZP_07843935.1| tRNA:M(5)U-54 methyltransferase [Staphylococcus hominis subsp. hominis C80] gi|313655207|gb|EFS18952.1| tRNA:M(5)U-54 methyltransferase [Staphylococcus hominis subsp. hominis C80] Length = 435 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 119/499 (23%), Positives = 193/499 (38%), Gaps = 87/499 (17%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGL-- 53 S V VIG G AG EAA A+ G LI H T + C+ ++ G Sbjct: 2 SQTVNVIGAGLAGSEAAYQLAERGIKVNLIEMRPVKQTPAHHTDKFAELVCSNSLRGNAL 61 Query: 54 --GKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREI 111 G G L E+ LD L+ AD A + PA G DR + + + Sbjct: 62 TNGVGVLKEEMRRLDSLIIAAADKARV----------PA--GGALAVDRHDFAGYITDTL 109 Query: 112 LSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHI-GKLKI- 169 + N+ V+ E+ II+ T LTT + ++ I GK ++ Sbjct: 110 KNHPNVTVLNKEIHSIPEGHTIIA-------------TGPLTTEHLAKEIVEITGKDQLY 156 Query: 170 ---PAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPF 226 A + + S + ++K +D G + + TE++F Sbjct: 157 FYDAAAPIIEKDSIDMDKVYLKSRYDKG----------EAAYLNCPMTEEEF-------- 198 Query: 227 SFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKS---YGPRYCPSIEDKIV 283 ++ + +E + N E + +G + +GP +ED Sbjct: 199 ----NRFYDAVLEAEVAPVNEFEKEKYFEGCMPFEVMAGRGRKTLLFGPMKPVGLEDP-- 252 Query: 284 RFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEY 343 + G+R + L + + G T L Q + I+ IPGLE V+I+R G Sbjct: 253 KTGKRPYAVVQLRQDDAAGTLYNIVGFQTHLKWGAQKEVIQLIPGLENVDIVRYGVMHRN 312 Query: 344 DYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFS 402 +IN P L E + AGQ+ G GY E+AA GLVAGIN A K + F Sbjct: 313 TFINSPDVLNEKYELINNDRIQFAGQMTGVEGYVESAASGLVAGINLAHKLLGKGEVIFP 372 Query: 403 RTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQK 462 R ++ IG M + S A+ + +P NA+ L P + I +++++ Sbjct: 373 R-ETMIGSMA-------------YYISHAKNEKNFQPMNANFGLLPSLDRR--IKDKKER 416 Query: 463 RFAKYIQEYNFLRSLLKSL 481 A+ + ++L + K+L Sbjct: 417 YEAQAYRALDYLENFKKTL 435 >gi|209559451|ref|YP_002285923.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus pyogenes NZ131] gi|209540652|gb|ACI61228.1| Gid-like Protein [Streptococcus pyogenes NZ131] Length = 448 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/97 (38%), Positives = 52/97 (53%), Gaps = 1/97 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +++ LF AG Sbjct: 291 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLTETFQSRSNPNLFFAG 350 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 Q+ G GY E+AA GLVAGIN+AR + + + F +T Sbjct: 351 QMTGVEGYVESAASGLVAGINAARLFKREEALIFPQT 387 >gi|169350426|ref|ZP_02867364.1| hypothetical protein CLOSPI_01194 [Clostridium spiroforme DSM 1552] gi|169292746|gb|EDS74879.1| hypothetical protein CLOSPI_01194 [Clostridium spiroforme DSM 1552] Length = 434 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 42/120 (35%), Positives = 64/120 (53%), Gaps = 4/120 (3%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + I IPGLE + +R G +I +PK L T + K + +F+AG Sbjct: 276 GFQTHLTWPEQKRIIHMIPGLENASFVRYGVMHRNSFICSPKYLLNTYQLKLANNIFMAG 335 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT--SKGVLEPYR 425 QI G GY E+A G+VAGIN AR + + F + ++ +G + + +T SK +P + Sbjct: 336 QITGVEGYVESAQSGIVAGINMARLLEGKELLVFPK-ETVMGALANYITNASKDDFQPMK 394 >gi|205830466|sp|Q1J6J1|TRMFO_STRPF RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase Length = 448 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/97 (38%), Positives = 52/97 (53%), Gaps = 1/97 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +++ LF AG Sbjct: 291 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLTETFQSRSNPNLFFAG 350 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 Q+ G GY E+AA GLVAGIN+AR + + + F +T Sbjct: 351 QMTGVEGYVESAASGLVAGINAARLFKREEALIFPQT 387 >gi|116627729|ref|YP_820348.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus thermophilus LMD-9] gi|122267674|sp|Q03KX0|TRMFO_STRTD RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|116101006|gb|ABJ66152.1| tRNA uridine 5-carboxymethylaminomethyl modification FAD-utilizing enzyme [Streptococcus thermophilus LMD-9] gi|312278277|gb|ADQ62934.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO [Streptococcus thermophilus ND03] Length = 447 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 39/97 (40%), Positives = 50/97 (51%), Gaps = 1/97 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T ++K LF AG Sbjct: 291 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLKQTFQSKSNPNLFFAG 350 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 Q+ G GY E+AA GLVAGIN+AR D + F T Sbjct: 351 QMTGVEGYVESAASGLVAGINAARLFKGEDEVIFPHT 387 >gi|55822863|ref|YP_141304.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus thermophilus CNRZ1066] gi|81170605|sp|Q5M014|TRMFO_STRT1 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|55738848|gb|AAV62489.1| glucose-inhibited division protein [Streptococcus thermophilus CNRZ1066] Length = 447 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 39/97 (40%), Positives = 50/97 (51%), Gaps = 1/97 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T ++K LF AG Sbjct: 291 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLKQTFQSKSNPNLFFAG 350 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 Q+ G GY E+AA GLVAGIN+AR D + F T Sbjct: 351 QMTGVEGYVESAASGLVAGINAARLFKGEDEVIFPHT 387 >gi|327441063|dbj|BAK17428.1| NAD-utilizing enzyme [Solibacillus silvestris StLB046] Length = 437 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 48/142 (33%), Positives = 70/142 (49%), Gaps = 9/142 (6%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE + I+R G +IN PK L T + K LF AG Sbjct: 279 GFQTHLKWPEQKRVFSMIPGLENLEIVRYGVMHRNTFINSPKVLTQTYQLKARPNLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV--LEP-- 423 Q+ G GY E+A GL+AGIN+AR + + + F ++ +G M +T +P Sbjct: 339 QMTGVEGYVESAGSGLIAGINAARMALGQELLYFPH-ETALGAMARYITHTDAKNFQPMN 397 Query: 424 --YRMFTSRAEYRISLRPDNAD 443 + +F E RI +P+ A+ Sbjct: 398 VNFGIFPEFGE-RIKSKPERAE 418 >gi|55820943|ref|YP_139385.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus thermophilus LMG 18311] gi|81170606|sp|Q5M4M7|TRMFO_STRT2 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|55736928|gb|AAV60570.1| glucose-inhibited division protein [Streptococcus thermophilus LMG 18311] Length = 447 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 39/97 (40%), Positives = 50/97 (51%), Gaps = 1/97 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T ++K LF AG Sbjct: 291 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLKQTFQSKSNPNLFFAG 350 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 Q+ G GY E+AA GLVAGIN+AR D + F T Sbjct: 351 QMTGVEGYVESAASGLVAGINAARLFKGEDEVIFPHT 387 >gi|15675145|ref|NP_269319.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus pyogenes M1 GAS] gi|71910706|ref|YP_282256.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus pyogenes MGAS5005] gi|26006773|sp|Q99ZL9|TRMFO_STRP1 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|13622306|gb|AAK34040.1| putative glucose-inhibited division protein [Streptococcus pyogenes M1 GAS] gi|71853488|gb|AAZ51511.1| glucose inhibited division protein A [Streptococcus pyogenes MGAS5005] Length = 448 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 37/97 (38%), Positives = 52/97 (53%), Gaps = 1/97 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +++ LF AG Sbjct: 291 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLTETFQSRSNPNLFFAG 350 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 Q+ G GY E+AA GLVAGIN+AR + + + F +T Sbjct: 351 QMTGVEGYVESAASGLVAGINAARLFKREEALIFPQT 387 >gi|169827112|ref|YP_001697270.1| tRNA uridine 5-carboxymethylaminomethyl modification protein gid [Lysinibacillus sphaericus C3-41] gi|205830362|sp|B1HQJ3|TRMFO_LYSSC RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|168991600|gb|ACA39140.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gid [Lysinibacillus sphaericus C3-41] Length = 437 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 1/94 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + ++ IPGLE V I+R G +IN PK L T + ++ +F AG Sbjct: 279 GFQTHLKWGPQKEVLQLIPGLENVEIVRYGVMHRNTFINSPKVLEKTYQLREQKNIFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICF 401 Q+ G GY E+A GL+AGIN+AR + + I F Sbjct: 339 QMTGVEGYVESAGSGLIAGINAARLALGQEPIIF 372 >gi|126654063|ref|ZP_01725889.1| glucose-inhibited division protein A [Bacillus sp. B14905] gi|126589443|gb|EAZ83590.1| glucose-inhibited division protein A [Bacillus sp. B14905] Length = 437 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 1/94 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + ++ IPGLE V I+R G +IN PK L T + ++ +F AG Sbjct: 279 GFQTHLKWGPQKEVLQLIPGLENVEIVRYGVMHRNTFINSPKVLEKTYQLREQKNIFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICF 401 Q+ G GY E+A GL+AGIN+AR + + I F Sbjct: 339 QMTGVEGYVESAGSGLIAGINAARLALGHEPIIF 372 >gi|312135861|ref|YP_004003199.1| gid protein [Caldicellulosiruptor owensensis OL] gi|311775912|gb|ADQ05399.1| gid protein [Caldicellulosiruptor owensensis OL] Length = 436 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 41/110 (37%), Positives = 60/110 (54%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE +R G + YIN P+ L L KK +F AG Sbjct: 277 GFQTRLKWGEQKRVFRLIPGLENAEFVRYGVMHKNSYINSPEVLTKYLFLKKYPNIFFAG 336 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 QI G GY E+A+ G++AGIN+AR+ + + ++ IG +I+ +T+ Sbjct: 337 QITGVEGYLESASTGIIAGINAARQVLGKEPVSLP-PNTCIGALIEYITT 385 >gi|313609073|gb|EFR84787.1| tRNA:M(5)U-54 methyltransferase [Listeria monocytogenes FSL F2-208] Length = 449 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 42/110 (38%), Positives = 57/110 (51%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE I+R G +IN P L PT + K + LF AG Sbjct: 293 GFQTHLKWGEQKRVFGMIPGLENAEIVRYGVMHRNTFINSPTVLEPTYQLKTRNDLFFAG 352 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+AA GL AGIN+A + + + F ++ IG + +TS Sbjct: 353 QMTGVEGYVESAASGLAAGINAANFVEEKELVVFP-AETAIGSLAHYITS 401 >gi|262282244|ref|ZP_06060012.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus sp. 2_1_36FAA] gi|262261535|gb|EEY80233.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus sp. 2_1_36FAA] Length = 444 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 107/430 (24%), Positives = 167/430 (38%), Gaps = 73/430 (16%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGG 52 +++SY + VIG G AG EAA AK G L HKT+ + C+ ++ G Sbjct: 1 MSQSY-INVIGAGLAGSEAAYQIAKRGIPVKLYEMRGVKLTPQHKTTDFAELVCSNSLRG 59 Query: 53 LGKGHLVREIDALDGLMGRVADAAGIQFRVLN---VKKGPAVRGPRTQADRELYRLAMQR 109 DAL +G + + + R L+ +K A R P A LA+ R Sbjct: 60 ----------DALTNAVGLLKE----EMRRLDSVILKSAEATRVPAGGA------LAVDR 99 Query: 110 EILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKI 169 E SQ +++ + ++ I + + + V+ TG + KI Sbjct: 100 EGFSQMVTELV--------SNHPLVEVIREEITEIPEDAITVIATGPLTSDAL---AEKI 148 Query: 170 PAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTII----WDKTEKQFADERLIP 225 A GD F +D + T +D + +DK E + + + Sbjct: 149 HALNGGDG--------FYFYDAAAPIIDVNT---IDMTKVYLKSRYDKGEAAYLNAPMTK 197 Query: 226 FSFMT--DKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKS--YGPRYCPSIEDK 281 FM D + N + E + + E + + + IK+ YGP +E Sbjct: 198 QEFMDFHDALVNAE-EAPLN--SFEKEKYFEGCMPIEVMAKRGIKTMLYGPMKPVGLEYP 254 Query: 282 IVRFGERNGHQ------IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNII 335 G R+G + L + + G T L Q + + IPGLE + Sbjct: 255 DDYQGPRDGEYKTPYAVVQLRQDNAAGSLYNIVGFQTHLKWGEQKRVFQMIPGLENAEFV 314 Query: 336 RPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSN 394 R G Y++ P L T ++K LF AGQ+ G GY E+AA GLVAGIN+AR Sbjct: 315 RYGVMHRNSYMDSPNLLEQTFRSRKQPNLFFAGQMTGVEGYVESAASGLVAGINAARLFK 374 Query: 395 KLDCICFSRT 404 + + F T Sbjct: 375 GEEALVFPET 384 >gi|47093925|ref|ZP_00231664.1| gid protein [Listeria monocytogenes str. 4b H7858] gi|217964581|ref|YP_002350259.1| tRNA:M(5)U-54 methyltransferase [Listeria monocytogenes HCC23] gi|226223879|ref|YP_002757986.1| glucose inhibited division protein A [Listeria monocytogenes Clip81459] gi|290894170|ref|ZP_06557141.1| gid protein [Listeria monocytogenes FSL J2-071] gi|47017711|gb|EAL08505.1| gid protein [Listeria monocytogenes str. 4b H7858] gi|217333851|gb|ACK39645.1| tRNA:M(5)U-54 methyltransferase [Listeria monocytogenes HCC23] gi|225876341|emb|CAS05050.1| Putative glucose inhibited division protein A [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|290556300|gb|EFD89843.1| gid protein [Listeria monocytogenes FSL J2-071] gi|307570855|emb|CAR84034.1| gid protein [Listeria monocytogenes L99] gi|328468565|gb|EGF39565.1| tRNA (uracil-5-)-methyltransferase Gid [Listeria monocytogenes 1816] Length = 434 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 42/110 (38%), Positives = 57/110 (51%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE I+R G +IN P L PT + K + LF AG Sbjct: 278 GFQTHLKWGEQKRVFGMIPGLENAEIVRYGVMHRNTFINSPTVLEPTYQLKTRNDLFFAG 337 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+AA GL AGIN+A + + + F ++ IG + +TS Sbjct: 338 QMTGVEGYVESAASGLAAGINAANFVEEKELVVFP-AETAIGSLAHYITS 386 >gi|332311721|gb|EGJ24816.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO [Listeria monocytogenes str. Scott A] Length = 449 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 42/110 (38%), Positives = 57/110 (51%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE I+R G +IN P L PT + K + LF AG Sbjct: 293 GFQTHLKWGEQKRVFGMIPGLENAEIVRYGVMHRNTFINSPTVLEPTYQLKTRNDLFFAG 352 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+AA GL AGIN+A + + + F ++ IG + +TS Sbjct: 353 QMTGVEGYVESAASGLAAGINAANFVEEKELVVFP-AETAIGSLAHYITS 401 >gi|46907503|ref|YP_013892.1| tRNA (uracil-5-)-methyltransferase Gid [Listeria monocytogenes serotype 4b str. F2365] gi|254824663|ref|ZP_05229664.1| gid protein [Listeria monocytogenes FSL J1-194] gi|254932407|ref|ZP_05265766.1| tRNA (uracil-5-)-methyltransferase Gid [Listeria monocytogenes HPB2262] gi|255520258|ref|ZP_05387495.1| tRNA (uracil-5-)-methyltransferase Gid [Listeria monocytogenes FSL J1-175] gi|50400231|sp|Q720E5|TRMFO_LISMF RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|46880771|gb|AAT04069.1| gid protein [Listeria monocytogenes serotype 4b str. F2365] gi|293583964|gb|EFF95996.1| tRNA (uracil-5-)-methyltransferase Gid [Listeria monocytogenes HPB2262] gi|293593902|gb|EFG01663.1| gid protein [Listeria monocytogenes FSL J1-194] gi|328475120|gb|EGF45904.1| tRNA (uracil-5-)-methyltransferase Gid [Listeria monocytogenes 220] Length = 434 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 42/110 (38%), Positives = 57/110 (51%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE I+R G +IN P L PT + K + LF AG Sbjct: 278 GFQTHLKWGEQKRVFGMIPGLENAEIVRYGVMHRNTFINSPTVLEPTYQLKTRNDLFFAG 337 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+AA GL AGIN+A + + + F ++ IG + +TS Sbjct: 338 QMTGVEGYVESAASGLAAGINAANFVEEKELVVFP-AETAIGSLAHYITS 386 >gi|289550958|ref|YP_003471862.1| tRNA:m(5)U-54 MTase gid [Staphylococcus lugdunensis HKU09-01] gi|315658460|ref|ZP_07911332.1| tRNA:M(5)U-54 methyltransferase [Staphylococcus lugdunensis M23590] gi|289180490|gb|ADC87735.1| tRNA:m(5)U-54 MTase gid [Staphylococcus lugdunensis HKU09-01] gi|315496789|gb|EFU85112.1| tRNA:M(5)U-54 methyltransferase [Staphylococcus lugdunensis M23590] Length = 435 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 116/473 (24%), Positives = 177/473 (37%), Gaps = 103/473 (21%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGLG---- 54 V VIG G AG EAA A+ G + LI H T + C+ ++ G Sbjct: 5 VNVIGAGLAGSEAAYQLAQRGINVNLIEMRPVKQTPAHHTDKFAELVCSNSLRGNALTNA 64 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L E+ LD L+ + AD A K PA G DR + + + S Sbjct: 65 VGVLKEEMRRLDSLIIKAADQA----------KVPA--GGALAVDRHDFAGYVTDALRSH 112 Query: 115 ENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHI-GKLKI---- 169 N+ V+ E+ +II+ T LTT + + +++I GK ++ Sbjct: 113 PNVTVLNEEITQIPDGHSIIA-------------TGPLTTSSLAQEIVNITGKDQLYFYD 159 Query: 170 PAGRMGDSPSNSLFNSFMKFDFDTGR------------LKTGTPARLDGKTIIWDKTEKQ 217 A + + S + ++K +D G A L + ++ EK+ Sbjct: 160 AAAPIIEKDSIDMDKVYLKSRYDKGEAAYLNCPMTEEEFNRFYDAVLAAEVAPVNEFEKE 219 Query: 218 FADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPS 277 E +PF M ++ R L +GP Sbjct: 220 KYFEGCMPFEVMAER----------GRKTL---------------------LFGPMKPVG 248 Query: 278 IEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRP 337 +ED + G+R + L + + G T L Q + I+ IPGLE V I+R Sbjct: 249 LEDP--KTGKRPFAVVQLRQDDAAGTLYNIVGFQTHLKWGAQKEVIQLIPGLENVEIVRY 306 Query: 338 GYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKL 396 G +IN P L E + AGQ+ G GY E+AA GLVAG+N A K Sbjct: 307 GVMHRNTFINSPDVLNEKYELIGNEHIQFAGQMTGVEGYVESAASGLVAGVNLAHKLLAK 366 Query: 397 DCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPI 449 + F R ++ IG M + S A+ + +P NA+ L P+ Sbjct: 367 GEVIFPR-ETMIGSMA-------------YYISHAKNDKNFQPMNANFGLLPV 405 >gi|148988382|ref|ZP_01819829.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus pneumoniae SP6-BS73] gi|147926063|gb|EDK77137.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus pneumoniae SP6-BS73] Length = 306 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 42/109 (38%), Positives = 56/109 (51%), Gaps = 2/109 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +KK LF AG Sbjct: 150 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTYRSKKQPNLFFAG 209 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 Q+ G GY E+AA GLVAGIN+AR + + F T + IG + +T Sbjct: 210 QMTGVEGYVESAASGLVAGINAARLFKEESEVIFPETTA-IGSLAHYIT 257 >gi|124022709|ref|YP_001017016.1| tRNA (uracil-5-)-methyltransferase Gid [Prochlorococcus marinus str. MIT 9303] gi|205830318|sp|A2C8E1|TRMFO_PROM3 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|123962995|gb|ABM77751.1| NAD binding site:Glucose inhibited division protein A family protein [Prochlorococcus marinus str. MIT 9303] Length = 467 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 48/146 (32%), Positives = 70/146 (47%), Gaps = 3/146 (2%) Query: 267 IKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTI 326 I + PR+ + D+ VR +R + L E + G T L Q + ++ I Sbjct: 253 IGLWDPRWG-DLNDRDVRRSKRAYAVVQLRKEDHEGRLWNLVGFQTNLKWSEQKRVLKMI 311 Query: 327 PGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVA 385 PGL + +R G ++ P+ L PTL+ K S L AGQI GT GY A A G +A Sbjct: 312 PGLHQAEFVRFGVMHRNTFLEAPQLLEPTLQFSKRSNLLAAGQITGTEGYTAAVAGGWLA 371 Query: 386 GINSARKSNKLDCICFSRTDSYIGVM 411 G N+AR + L+ I T + IG + Sbjct: 372 GSNAARLAMGLNTITLPST-TMIGAL 396 >gi|124026173|ref|YP_001015289.1| tRNA (uracil-5-)-methyltransferase Gid [Prochlorococcus marinus str. NATL1A] gi|205830316|sp|A2C3G4|TRMFO_PROM1 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|123961241|gb|ABM76024.1| NAD binding site:Glucose inhibited division protein A family [Prochlorococcus marinus str. NATL1A] Length = 467 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 62/205 (30%), Positives = 89/205 (43%), Gaps = 25/205 (12%) Query: 270 YGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGL 329 + PR+ + DK +R +R + L E + G T L Q + R IPGL Sbjct: 256 WDPRWG-DVNDKNIRRLKRAHAVVQLRQEDKAGQLWNLVGFQTNLKWGEQKRIFRMIPGL 314 Query: 330 EKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGIN 388 K IR G Y+ +PK + PTL+ LF AGQ+ GT GY A A G +AG N Sbjct: 315 SKAEFIRFGVMHRNTYLESPKLIEPTLQFINRKTLFAAGQLTGTEGYAAAIAGGWLAGTN 374 Query: 389 SARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTP 448 +A + LD I + MI LT+ F S ++ SLR N N P Sbjct: 375 AALLAKGLDTITLPSS-----TMIGALTN---------FVSNSQ--ASLRVKNKKN-FQP 417 Query: 449 IGMKLGCIGE------RRQKRFAKY 467 + G + E +++R+ +Y Sbjct: 418 MPANFGLLPELDNRVHNKRERYKEY 442 >gi|299536759|ref|ZP_07050067.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gid [Lysinibacillus fusiformis ZC1] gi|298727771|gb|EFI68338.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gid [Lysinibacillus fusiformis ZC1] Length = 437 Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 1/94 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + ++ IPGLE V I+R G +IN PK L T + ++ +F AG Sbjct: 279 GFQTHLKWGPQKEVLQLIPGLENVEIVRYGVMHRNTFINSPKVLEKTYQLREQKNIFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICF 401 Q+ G GY E+A GL+AGIN+AR + + + F Sbjct: 339 QMTGVEGYVESAGSGLIAGINAARLALGQEPVIF 372 >gi|256384026|gb|ACU78596.1| tRNA:M(5)U-54 methyltransferase [Mycoplasma mycoides subsp. capri str. GM12] gi|256384858|gb|ACU79427.1| tRNA:M(5)U-54 methyltransferase [Mycoplasma mycoides subsp. capri str. GM12] gi|296455781|gb|ADH22016.1| tRNA:M(5)U-54 methyltransferase [synthetic Mycoplasma mycoides JCVI-syn1.0] Length = 438 Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 101/407 (24%), Positives = 157/407 (38%), Gaps = 80/407 (19%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGL----G 54 V +IG G AGCEAA A L KT+ + C+ Sbjct: 5 VKIIGAGLAGCEAAYFLANNNIQVELYEVKTLIKNEVQKTNNFAELVCSNTFRSQSLLNA 64 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQA-DRELYRLAMQREILS 113 G L E+ L+ L+ ++AD+ I G A DRE + + I + Sbjct: 65 AGILKAEMRRLNSLVIKIADSCKID-------------GDDALAVDREDFSKKLTEVIKN 111 Query: 114 QENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIH-IGKLKIPAG 172 N+ +I+ V+ + E N + +T LTT + IGK K+ Sbjct: 112 HPNITIIEQNVSHIDDE-----------NDLTLIATGPLTTNELKEDIQRLIGKQKL--- 157 Query: 173 RMGDSPSNSLFNSFMKFD--FDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT 230 D+ + + + F+ + +GR K G K I E++F + F Sbjct: 158 FFMDASAPIITKDSIDFNKAYYSGRHKLG-------KYICCPLNEQEFNE-------FAD 203 Query: 231 DKITNRQIECGITRTNLETHRIIM----ENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFG 286 + I Q++ E + I + I+ A S + GP ++ D Sbjct: 204 NLINAEQVQLK------EFEKSIFFKGCQPIEQLAKTSKKLLLKGPMSSNNLLD------ 251 Query: 287 ERNGHQIF----LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIE 342 +N HQ + L + + G T L Q + +TIPGL+K I+R G + Sbjct: 252 -QNNHQPYAVVQLRQDDAKDSLYNMVGFQTNLKWPEQKRVFQTIPGLQKAKIVRYGVMHK 310 Query: 343 YDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGIN 388 YIN PK L L+ + +F AGQI G GY E+A+ G+ A IN Sbjct: 311 NYYINSPKILNFKLQVMRKKNVFFAGQITGVEGYIESASSGIWAAIN 357 >gi|217076585|ref|YP_002334301.1| tRNA (uracil-5-)-methyltransferase Gid [Thermosipho africanus TCF52B] gi|226707909|sp|B7IFU6|TRMFO_THEAB RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|217036438|gb|ACJ74960.1| O tRNA:M(5)U-54 methyltransferase [Thermosipho africanus TCF52B] Length = 429 Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 112/490 (22%), Positives = 183/490 (37%), Gaps = 107/490 (21%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGL----G 54 V ++G G AG E A + G + HK T G + C+ ++ Sbjct: 3 VNIVGAGLAGVEVAYKLLREGFKVRIFEQKPVKFSPVHKMETFGELVCSNSLKSESLKNA 62 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 +G L E+ LD L+ A + PA G DRE + + + + S Sbjct: 63 EGILKEEMKLLDSLVLNCAYKTRV----------PA--GKALAVDREKFSQCITKVLESF 110 Query: 115 ENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRM 174 EN+++++ E + I + N + +T T G F + + Sbjct: 111 ENIEIVRKE----------VEKIDLDTNEIWVVATGPTTDGKFAQWL------------- 147 Query: 175 GDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI- 233 + L F+ F FD + +I ++K F+ D+ Sbjct: 148 -----SKLTGGFLNF-FD------AVAPIISRDSIDFNK-------------CFVGDRYG 182 Query: 234 --TNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGER--- 288 T I C +T+ E + N + + D K R C IE+ I + GE+ Sbjct: 183 VGTGDYINCPMTKEEYERFYRELVNAEMIEMKDFDRKLLFER-CQPIEE-IAKSGEKSLL 240 Query: 289 ----------NGHQ-------IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEK 331 N H I L E ++ G T L Q + IR IPGLE Sbjct: 241 FGPLRPVGLVNPHTGEIPYAVIQLRKEDEEGNMYNIVGFQTRLKWSEQKRIIRLIPGLEN 300 Query: 332 VNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSA 390 I+R G YI+ P+ L L KK +F AGQI G GY E+AA G+ G+N + Sbjct: 301 AEILRYGVMHRNTYIDTPRVLDEFLRHKKYKNIFFAGQITGVEGYLESAACGIYVGLNIS 360 Query: 391 RKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIG 450 R + + + + +G +I+ +T L+P M+ + + ++ + +L I Sbjct: 361 RILSGKEPVKLP-PKTMMGALINYITKADELKP--MYANFGLINVKMKKNEKREKLHEI- 416 Query: 451 MKLGCIGERR 460 CI E + Sbjct: 417 ----CINEMK 422 >gi|213026621|ref|ZP_03341068.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 120 Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 37/110 (33%), Positives = 61/110 (55%), Gaps = 1/110 (0%) Query: 506 EFLSYPDFSIQNLFSICPDARKFS-SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLI 564 + L P+ + L S+ A E+++I+ Y Y RQ E ++ E L+ Sbjct: 2 DLLRRPEMTYAQLTSLAAFAPALEDEQAAEQVEIQVKYEGYIARQQDEIEKQLRNENTLL 61 Query: 565 PKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIK 614 P DY + LSNE+ KL+ KP ++ QAS+I G+TPAA+++LL+++K Sbjct: 62 PATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISGVTPAAISILLVWLK 111 >gi|323339882|ref|ZP_08080151.1| tRNA:M(5)U-54 methyltransferase [Lactobacillus ruminis ATCC 25644] gi|323092755|gb|EFZ35358.1| tRNA:M(5)U-54 methyltransferase [Lactobacillus ruminis ATCC 25644] Length = 436 Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 49/148 (33%), Positives = 71/148 (47%), Gaps = 4/148 (2%) Query: 270 YGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGL 329 +GP +ED R G+ + L + D+ G T L Q + IPGL Sbjct: 241 FGPLKPVGLEDP--RTGKEPYAVVQLRQDNAVGDLYNIVGFQTHLKWGEQKRVFSMIPGL 298 Query: 330 EKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGIN 388 E +R G Y+ +P+ L T +TKK S L AGQ+ G GY E+AA GL AG+N Sbjct: 299 ENAQFVRYGVMHRNTYLRSPEFLKDTYQTKKRSDLLFAGQMTGVEGYVESAASGLYAGLN 358 Query: 389 SARKSNKLDCICFSRTDSYIGVMIDDLT 416 +AR + D + F ++ +G M +T Sbjct: 359 AARLIEEKDPLVFP-VETMMGAMAHYIT 385 >gi|89895299|ref|YP_518786.1| tRNA (uracil-5-)-methyltransferase Gid [Desulfitobacterium hafniense Y51] gi|122482353|sp|Q24UF0|TRMFO_DESHY RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|89334747|dbj|BAE84342.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 437 Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 47/148 (31%), Positives = 69/148 (46%), Gaps = 4/148 (2%) Query: 269 SYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPG 328 ++GP + D R G+R+ + L E + G T L Q + R IPG Sbjct: 240 TFGPLKPVGLID--ARTGQRSYAVVQLRKENRAGTLFNLVGFQTHLKWGEQQRVFRLIPG 297 Query: 329 LEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGI 387 LE +R G ++N PK L +K LF AGQI G GY E+ A GLVAG+ Sbjct: 298 LENAEFVRFGVMHRNTFLNAPKVLKADYSLQKTPQLFFAGQITGVEGYVESTASGLVAGL 357 Query: 388 NSARKSNKLDCICFSRTDSYIGVMIDDL 415 N+ R+ L + F + ++ +G + L Sbjct: 358 NAVRRLKNLPTLIFPQ-ETALGALARHL 384 >gi|42561029|ref|NP_975480.1| tRNA (uracil-5-)-methyltransferase Gid [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|81400612|sp|Q6MTB4|TMFO2_MYCMS RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO 2; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase 2; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase 2 gi|42492526|emb|CAE77122.1| glucose inhibited division protein [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|301321421|gb|ADK70064.1| tRNA:M(5)U-54 methyltransferase [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 438 Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 99/394 (25%), Positives = 154/394 (39%), Gaps = 54/394 (13%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDG 67 V +IG G AGCEAA A L KT + L + R L+ Sbjct: 5 VKIIGAGLAGCEAAYFLANNNIQVELYEVKTLIKNEVQKTNNFAELVCFNTFRSQSLLNA 64 Query: 68 LMGRVADAAGIQFRVLNVKKGPAVRGPRTQA-DRELYRLAMQREILSQENLDVIQGEVAG 126 A+ + V+ + G + G A DRE + + I + N+ +I+ V+ Sbjct: 65 AGILKAEMRRLNSLVIKIADGCKIDGDDALAVDREDFSKKLTEVIKNHPNITIIEQNVSH 124 Query: 127 FNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIH-IGKLKIPAGRMGDSPSNSLFNS 185 + E N + +T LTT + IGK K+ D+ ++ + Sbjct: 125 IDDE-----------NDLTLIATGPLTTNELKEDIQRLIGKQKL---FFIDASASIITKD 170 Query: 186 FMKFD--FDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + F+ + +GR K G K I E++F + F + I Q++ Sbjct: 171 SIDFNKVYYSGRHKLG-------KYICCPLNEQEFNE-------FADNLINAEQVQLK-- 214 Query: 244 RTNLETHRIIM----ENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIF----L 295 E + I + I+ A S + GP ++ D +N HQ + L Sbjct: 215 ----EFEKSIFFKGCQPIEQLAKTSKKLLLKGPMSPNNLLD-------QNNHQPYSVVQL 263 Query: 296 EPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPT 354 + + G T L Q + +TIPGLEK I+R G + YIN PK L Sbjct: 264 RQDDAKDSLYNMVGFQTNLKWPEQKRVFQTIPGLEKAKIVRYGVMHKNYYINSPKILNFK 323 Query: 355 LETKKISGLFLAGQINGTTGYEEAAAQGLVAGIN 388 L+ + +F AGQI G GY E+A+ G+ A IN Sbjct: 324 LQVMRKKNVFFAGQITGVEGYIESASSGIWAAIN 357 >gi|297520906|ref|ZP_06939292.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli OP50] Length = 53 Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats. Identities = 31/47 (65%), Positives = 37/47 (78%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGG 52 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGLMSCNPAIGG 53 >gi|317153468|ref|YP_004121516.1| gid protein [Desulfovibrio aespoeensis Aspo-2] gi|316943719|gb|ADU62770.1| gid protein [Desulfovibrio aespoeensis Aspo-2] Length = 442 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 45/134 (33%), Positives = 67/134 (50%), Gaps = 2/134 (1%) Query: 286 GERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDY 345 GER + L E + G T L Q + R IPGLE V +R G Y Sbjct: 260 GERPYAVVQLRTENQDKTAFNLVGFQTKLKYPEQKRIFRMIPGLENVEFLRLGSIHRNTY 319 Query: 346 IN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 +N P L L+ K SG FLAGQI+G GY E+AA GL G++ AR+ + + + Sbjct: 320 VNAPDVLDADLQLKARSGFFLAGQISGVEGYLESAACGLWVGLSLARRLSGVSVVK-PPV 378 Query: 405 DSYIGVMIDDLTSK 418 ++ +G ++ L+++ Sbjct: 379 ETALGALLGHLSTR 392 >gi|319947070|ref|ZP_08021304.1| tRNA:M(5)U-54 methyltransferase [Streptococcus australis ATCC 700641] gi|319747118|gb|EFV99377.1| tRNA:M(5)U-54 methyltransferase [Streptococcus australis ATCC 700641] Length = 466 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 42/109 (38%), Positives = 56/109 (51%), Gaps = 2/109 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +KK + LF AG Sbjct: 310 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTYRSKKQANLFFAG 369 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 Q+ G GY E+AA GLVAGIN+AR + F T + IG + +T Sbjct: 370 QMTGVEGYVESAASGLVAGINAARLFKGEEASVFPETTA-IGSLAHYIT 417 >gi|283768284|ref|ZP_06341196.1| tRNA:M(5)U-54 methyltransferase [Bulleidia extructa W1219] gi|283104676|gb|EFC06048.1| tRNA:M(5)U-54 methyltransferase [Bulleidia extructa W1219] Length = 432 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 43/104 (41%), Positives = 53/104 (50%), Gaps = 2/104 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + I+ IPGLEK I+R G YIN PK L T + LF AG Sbjct: 276 GFQTHLKWPEQKKVIQLIPGLEKAEIVRYGVMHRNSYINSPKYLEDTYRVSREEKLFFAG 335 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 Q+ G GY E+ A G VAGIN A+ + I F + + IG M Sbjct: 336 QMTGVEGYIESCASGFVAGINMAQILQGQEEIHFGQ-GTMIGAM 378 >gi|257867808|ref|ZP_05647461.1| tRNA (uracil-5-)-methyltransferase Gid [Enterococcus casseliflavus EC30] gi|257874135|ref|ZP_05653788.1| tRNA (uracil-5-)-methyltransferase Gid [Enterococcus casseliflavus EC10] gi|257876700|ref|ZP_05656353.1| tRNA (uracil-5-)-methyltransferase Gid [Enterococcus casseliflavus EC20] gi|257801891|gb|EEV30794.1| tRNA (uracil-5-)-methyltransferase Gid [Enterococcus casseliflavus EC30] gi|257808299|gb|EEV37121.1| tRNA (uracil-5-)-methyltransferase Gid [Enterococcus casseliflavus EC10] gi|257810866|gb|EEV39686.1| tRNA (uracil-5-)-methyltransferase Gid [Enterococcus casseliflavus EC20] Length = 433 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 44/123 (35%), Positives = 62/123 (50%), Gaps = 3/123 (2%) Query: 270 YGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGL 329 +GP +ED + G+R I L + + G T L Q + R IPGL Sbjct: 240 FGPMKPVGLEDP--KTGKRPYAVIQLRQDNAAASLYNIVGFQTHLKWGEQKRVFRMIPGL 297 Query: 330 EKVNIIRPGYAIEYDYINPKELFP-TLETKKISGLFLAGQINGTTGYEEAAAQGLVAGIN 388 E+ +R G ++N EL T ++KK LF AGQ+ G GY E+AA GL+AGIN Sbjct: 298 EEAEFVRYGVMHRNSFMNSPELLQQTYQSKKREDLFFAGQMTGVEGYVESAASGLMAGIN 357 Query: 389 SAR 391 +A+ Sbjct: 358 AAK 360 >gi|322373044|ref|ZP_08047580.1| tRNA:M(5)U-54 methyltransferase [Streptococcus sp. C150] gi|321278086|gb|EFX55155.1| tRNA:M(5)U-54 methyltransferase [Streptococcus sp. C150] Length = 447 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 39/97 (40%), Positives = 50/97 (51%), Gaps = 1/97 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T ++K LF AG Sbjct: 291 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLKQTFQSKSNPNLFFAG 350 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 Q+ G GY E+AA GLVAGIN+AR D + F T Sbjct: 351 QMTGVEGYVESAASGLVAGINAARLFMGEDEVIFPHT 387 >gi|254430149|ref|ZP_05043852.1| tRNA:m(5)U-54 methyltransferase [Cyanobium sp. PCC 7001] gi|197624602|gb|EDY37161.1| tRNA:m(5)U-54 methyltransferase [Cyanobium sp. PCC 7001] Length = 463 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 45/139 (32%), Positives = 67/139 (48%), Gaps = 2/139 (1%) Query: 267 IKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTI 326 I + PR+ + D+ VR R + L E + + G T L Q + +R I Sbjct: 249 IGLWDPRWG-DVNDREVRRARRAYAVVQLRQEDKDGRLWNLVGFQTNLKWGEQKRVLRMI 307 Query: 327 PGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVA 385 PGLE+ +R G ++ P+ L PTL+ ++ L AGQI GT GY A A G +A Sbjct: 308 PGLEQAEFVRFGVMHRNTFLEAPQLLDPTLQFRRRPTLLAAGQITGTEGYAAAVAGGWLA 367 Query: 386 GINSARKSNKLDCICFSRT 404 G N+AR + L+ + T Sbjct: 368 GTNAARLARGLEPLTLPPT 386 >gi|168494371|ref|ZP_02718514.1| tRNA:M(5)U-54 methyltransferase [Streptococcus pneumoniae CDC3059-06] gi|183575654|gb|EDT96182.1| tRNA:M(5)U-54 methyltransferase [Streptococcus pneumoniae CDC3059-06] Length = 444 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 39/97 (40%), Positives = 50/97 (51%), Gaps = 1/97 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +KK LF AG Sbjct: 288 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTYRSKKQPNLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 Q+ G GY E+AA GLVAGIN+AR + + F T Sbjct: 348 QMTGVEGYVESAASGLVAGINAARLFKEESEVIFPET 384 >gi|148992924|ref|ZP_01822543.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gid [Streptococcus pneumoniae SP9-BS68] gi|168490241|ref|ZP_02714440.1| tRNA:M(5)U-54 methyltransferase [Streptococcus pneumoniae SP195] gi|147928376|gb|EDK79392.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gid [Streptococcus pneumoniae SP9-BS68] gi|183571403|gb|EDT91931.1| tRNA:M(5)U-54 methyltransferase [Streptococcus pneumoniae SP195] gi|332073275|gb|EGI83754.1| tRNA:m(5)U-54 methyltransferase [Streptococcus pneumoniae GA17570] Length = 444 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 39/97 (40%), Positives = 50/97 (51%), Gaps = 1/97 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +KK LF AG Sbjct: 288 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTYRSKKQPNLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 Q+ G GY E+AA GLVAGIN+AR + + F T Sbjct: 348 QMTGVEGYVESAASGLVAGINAARLFKEESEVIFPET 384 >gi|15902888|ref|NP_358438.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus pneumoniae R6] gi|116516642|ref|YP_816316.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus pneumoniae D39] gi|149019532|ref|ZP_01834851.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus pneumoniae SP23-BS72] gi|168491031|ref|ZP_02715174.1| tRNA:M(5)U-54 methyltransferase [Streptococcus pneumoniae CDC0288-04] gi|169833706|ref|YP_001694391.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus pneumoniae Hungary19A-6] gi|194397933|ref|YP_002037581.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus pneumoniae G54] gi|33301132|sp|Q8DQ51|TRMFO_STRR6 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|122278798|sp|Q04KY2|TRMFO_STRP2 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|205830363|sp|B1IBA6|TRMFO_STRPI RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|226707908|sp|B5E446|TRMFO_STRP4 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|15458446|gb|AAK99648.1| Glucose inhibited division protein [Streptococcus pneumoniae R6] gi|116077218|gb|ABJ54938.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gid [Streptococcus pneumoniae D39] gi|147930907|gb|EDK81887.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus pneumoniae SP23-BS72] gi|168996208|gb|ACA36820.1| tRNA:M(5)U-54 methyltransferase [Streptococcus pneumoniae Hungary19A-6] gi|183574642|gb|EDT95170.1| tRNA:M(5)U-54 methyltransferase [Streptococcus pneumoniae CDC0288-04] gi|194357600|gb|ACF56048.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gid [Streptococcus pneumoniae G54] Length = 444 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 39/97 (40%), Positives = 50/97 (51%), Gaps = 1/97 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +KK LF AG Sbjct: 288 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTYRSKKQPNLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 Q+ G GY E+AA GLVAGIN+AR + + F T Sbjct: 348 QMTGVEGYVESAASGLVAGINAARLFKEESEVIFPET 384 >gi|168483013|ref|ZP_02707965.1| tRNA:M(5)U-54 methyltransferase [Streptococcus pneumoniae CDC1873-00] gi|172043339|gb|EDT51385.1| tRNA:M(5)U-54 methyltransferase [Streptococcus pneumoniae CDC1873-00] gi|332201408|gb|EGJ15478.1| tRNA:m(5)U-54 methyltransferase [Streptococcus pneumoniae GA47368] Length = 444 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 39/97 (40%), Positives = 50/97 (51%), Gaps = 1/97 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +KK LF AG Sbjct: 288 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTYRSKKQPNLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 Q+ G GY E+AA GLVAGIN+AR + + F T Sbjct: 348 QMTGVEGYVESAASGLVAGINAARLFKEESEVIFPET 384 >gi|148984684|ref|ZP_01817952.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus pneumoniae SP3-BS71] gi|148998622|ref|ZP_01826062.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gid [Streptococcus pneumoniae SP11-BS70] gi|149006382|ref|ZP_01830094.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gid [Streptococcus pneumoniae SP18-BS74] gi|168485894|ref|ZP_02710402.1| tRNA:M(5)U-54 methyltransferase [Streptococcus pneumoniae CDC1087-00] gi|168575605|ref|ZP_02721541.1| tRNA:M(5)U-54 methyltransferase [Streptococcus pneumoniae MLV-016] gi|221231710|ref|YP_002510862.1| protein Gid homolog [Streptococcus pneumoniae ATCC 700669] gi|225854448|ref|YP_002735960.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus pneumoniae JJA] gi|225856604|ref|YP_002738115.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus pneumoniae P1031] gi|298230562|ref|ZP_06964243.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254564|ref|ZP_06978150.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus pneumoniae str. Canada MDR_19A] gi|298503049|ref|YP_003724989.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus pneumoniae TCH8431/19A] gi|307067600|ref|YP_003876566.1| NAD(FAD)-utilizing enzyme possibly involved in translation [Streptococcus pneumoniae AP200] gi|307127505|ref|YP_003879536.1| tRNA:M(5)U-54 methyltransferase [Streptococcus pneumoniae 670-6B] gi|254789179|sp|B8ZP43|TRMFO_STRPJ RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|254789181|sp|C1CDT9|TRMFO_STRZJ RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|254789182|sp|C1CK27|TRMFO_STRZP RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|147755620|gb|EDK62667.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gid [Streptococcus pneumoniae SP11-BS70] gi|147762159|gb|EDK69121.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gid [Streptococcus pneumoniae SP18-BS74] gi|147923075|gb|EDK74190.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus pneumoniae SP3-BS71] gi|183571064|gb|EDT91592.1| tRNA:M(5)U-54 methyltransferase [Streptococcus pneumoniae CDC1087-00] gi|183578674|gb|EDT99202.1| tRNA:M(5)U-54 methyltransferase [Streptococcus pneumoniae MLV-016] gi|220674170|emb|CAR68696.1| protein Gid homolog [Streptococcus pneumoniae ATCC 700669] gi|225723936|gb|ACO19789.1| tRNA:M(5)U-54 methyltransferase [Streptococcus pneumoniae JJA] gi|225724389|gb|ACO20241.1| tRNA:M(5)U-54 methyltransferase [Streptococcus pneumoniae P1031] gi|298238644|gb|ADI69775.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus pneumoniae TCH8431/19A] gi|301799923|emb|CBW32504.1| protein Gid homolog [Streptococcus pneumoniae OXC141] gi|306409137|gb|ADM84564.1| NAD(FAD)-utilizing enzyme possibly involved in translation [Streptococcus pneumoniae AP200] gi|306484567|gb|ADM91436.1| tRNA:M(5)U-54 methyltransferase [Streptococcus pneumoniae 670-6B] gi|332075557|gb|EGI86025.1| tRNA:m(5)U-54 methyltransferase [Streptococcus pneumoniae GA17545] gi|332202798|gb|EGJ16867.1| tRNA:m(5)U-54 methyltransferase [Streptococcus pneumoniae GA41317] Length = 444 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 39/97 (40%), Positives = 50/97 (51%), Gaps = 1/97 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +KK LF AG Sbjct: 288 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTYRSKKQPNLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 Q+ G GY E+AA GLVAGIN+AR + + F T Sbjct: 348 QMTGVEGYVESAASGLVAGINAARLFKEESEVIFPET 384 >gi|219669733|ref|YP_002460168.1| tRNA (uracil-5-)-methyltransferase Gid [Desulfitobacterium hafniense DCB-2] gi|219539993|gb|ACL21732.1| gid protein [Desulfitobacterium hafniense DCB-2] Length = 437 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 47/148 (31%), Positives = 69/148 (46%), Gaps = 4/148 (2%) Query: 269 SYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPG 328 ++GP + D R G+R+ + L E + G T L Q + R IPG Sbjct: 240 TFGPLKPVGLID--ARTGQRSYAVVQLRKENRAGTLFNLVGFQTHLKWGEQQRVFRLIPG 297 Query: 329 LEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGI 387 LE +R G ++N PK L +K LF AGQI G GY E+ A GLVAG+ Sbjct: 298 LENAEFVRFGVMHRNTFLNAPKVLKADYSLQKTPQLFFAGQITGVEGYVESTASGLVAGL 357 Query: 388 NSARKSNKLDCICFSRTDSYIGVMIDDL 415 N+ R+ L + F + ++ +G + L Sbjct: 358 NAVRRLKNLPTLIFPQ-ETALGALARHL 384 >gi|313665363|ref|YP_004047234.1| tRNA:M(5)U-54 methyltransferase [Mycoplasma leachii PG50] gi|312949750|gb|ADR24346.1| tRNA:M(5)U-54 methyltransferase [Mycoplasma leachii PG50] Length = 438 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 102/407 (25%), Positives = 157/407 (38%), Gaps = 80/407 (19%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGL----G 54 V +IG G AGCEAA A L KT+ + C+ Sbjct: 5 VKIIGAGLAGCEAAYFLANNNIQVELYEVKTLIKNEVQKTNNFAELVCSNTFRSQSLLNA 64 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQA-DRELYRLAMQREILS 113 G L E+ L+ L+ ++AD I G A DRE + + I + Sbjct: 65 AGILKAEMRRLNSLVIKIADCCKID-------------GDDALAVDREDFSKRLTDVIKN 111 Query: 114 QENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIH-IGKLKIPAG 172 N+ +I+ V+ N E N + +T LTT + IGK K+ Sbjct: 112 HPNITIIEQNVSHINDE-----------NDLTLIATGPLTTNELKEDIQRLIGKQKL--- 157 Query: 173 RMGDSPSNSLFNSFMKFD--FDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT 230 D+ + + + F+ + +GR K G K I E++F + F+ Sbjct: 158 FFMDASAPIITKDSIDFNKVYYSGRHKLG-------KYICCPLNEQEFNE-------FVD 203 Query: 231 DKITNRQIECGITRTNLETHRIIM----ENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFG 286 + I Q++ E + I + I+ A S + GP ++ D Sbjct: 204 NLINAEQVQLK------EFEKSIFFKGCQPIEQLAKTSKKLLLKGPMSPNNLLD------ 251 Query: 287 ERNGHQIF----LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIE 342 +N Q + L + + + G T L Q + +TIPGLEK I+R G + Sbjct: 252 -QNNQQPYAVVQLRQDDVKDSLYNMVGFQTNLKWPEQKRVFQTIPGLEKAKIVRYGVMHK 310 Query: 343 YDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGIN 388 YIN PK L L+ + +F AGQI G GY E+A+ G+ A IN Sbjct: 311 NYYINSPKILNFKLQVMRKKNVFFAGQITGVEGYIESASSGIWAAIN 357 >gi|222153070|ref|YP_002562247.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus uberis 0140J] gi|254789180|sp|B9DS62|TRMFO_STRU0 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|222113883|emb|CAR42047.1| protein Gid homolog [Streptococcus uberis 0140J] Length = 444 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 38/99 (38%), Positives = 51/99 (51%), Gaps = 1/99 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +++ LF AG Sbjct: 288 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLKQTFQSRANENLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDS 406 Q+ G GY E+AA GLVAGIN+AR + I F T + Sbjct: 348 QMTGVEGYVESAASGLVAGINAARLFKGEEAIIFPETTA 386 >gi|237734603|ref|ZP_04565084.1| tRNA (uracil-5-)-methyltransferase gid [Mollicutes bacterium D7] gi|229382423|gb|EEO32514.1| tRNA (uracil-5-)-methyltransferase gid [Coprobacillus sp. D7] Length = 434 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 4/120 (3%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + I+ IPGLE + +R G +I +PK L T + K S +F+AG Sbjct: 276 GFQTHLTWPEQKRIIQMIPGLENASFVRYGVMHRNSFICSPKHLLKTYQLKNYSNIFMAG 335 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT--SKGVLEPYR 425 QI G GY E+A G+ AGIN R + + F ++ +G + + +T SK +P + Sbjct: 336 QITGVEGYVESAQSGMAAGINMVRLLEDKEPLIFPE-NTVMGALANYITNASKEDFQPMK 394 >gi|167756894|ref|ZP_02429021.1| hypothetical protein CLORAM_02443 [Clostridium ramosum DSM 1402] gi|167703069|gb|EDS17648.1| hypothetical protein CLORAM_02443 [Clostridium ramosum DSM 1402] Length = 434 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 4/120 (3%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + I+ IPGLE + +R G +I +PK L T + K S +F+AG Sbjct: 276 GFQTHLTWPEQKRIIQMIPGLENASFVRYGVMHRNSFICSPKHLLKTYQLKNYSNIFMAG 335 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT--SKGVLEPYR 425 QI G GY E+A G+ AGIN R + + F ++ +G + + +T SK +P + Sbjct: 336 QITGVEGYVESAQSGMAAGINMVRLLEDKEPLIFPE-NTVMGALANYITNASKEDFQPMK 394 >gi|325570944|ref|ZP_08146563.1| tRNA:M(5)U-54 methyltransferase [Enterococcus casseliflavus ATCC 12755] gi|325156270|gb|EGC68454.1| tRNA:M(5)U-54 methyltransferase [Enterococcus casseliflavus ATCC 12755] Length = 433 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 44/123 (35%), Positives = 62/123 (50%), Gaps = 3/123 (2%) Query: 270 YGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGL 329 +GP +ED + G+R I L + + G T L Q + R IPGL Sbjct: 240 FGPMKPVGLEDP--KTGKRPYAVIQLRQDNAAASLYNIVGFQTHLKWGEQKRVFRMIPGL 297 Query: 330 EKVNIIRPGYAIEYDYINPKELFP-TLETKKISGLFLAGQINGTTGYEEAAAQGLVAGIN 388 E+ +R G ++N EL T ++KK LF AGQ+ G GY E+AA GL+AGIN Sbjct: 298 EEAEFVRYGVMHRNSFMNSPELLQQTYQSKKREDLFFAGQMTGVEGYVESAASGLMAGIN 357 Query: 389 SAR 391 +A+ Sbjct: 358 AAK 360 >gi|289449591|ref|YP_003475176.1| tRNA:M(5)U-54 methyltransferase [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184138|gb|ADC90563.1| tRNA:M(5)U-54 methyltransferase [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 460 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 42/113 (37%), Positives = 56/113 (49%), Gaps = 2/113 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L + Q + IPGL K R G +IN PK L PT T+K LF AG Sbjct: 276 GFQTRLKQGEQRRVFGLIPGLSKAIFYRYGVMHRNTFINSPKHLNPTYATRKRHDLFFAG 335 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 Q+ G GY E+ A G+VA IN+ R L + F + + IG M + ++ V Sbjct: 336 QMTGVEGYVESIASGMVAAINAVRYFYNLPELVFPK-QTVIGAMANYISDPEV 387 >gi|312866589|ref|ZP_07726804.1| tRNA:m(5)U-54 methyltransferase [Streptococcus parasanguinis F0405] gi|311097888|gb|EFQ56117.1| tRNA:m(5)U-54 methyltransferase [Streptococcus parasanguinis F0405] Length = 444 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 42/109 (38%), Positives = 55/109 (50%), Gaps = 2/109 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +KK LF AG Sbjct: 288 GFQTHLKWGEQKRVFQMIPGLEHAEFVRYGVMHRNSYMDSPNLLEQTYRSKKQPNLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 Q+ G GY E+AA GLVAGIN+AR + F T + IG + +T Sbjct: 348 QMTGVEGYVESAASGLVAGINAARLFKGEEAAIFPETTA-IGSLAHYIT 395 >gi|296876493|ref|ZP_06900544.1| FADH(2)-oxidizing protein [Streptococcus parasanguinis ATCC 15912] gi|296432486|gb|EFH18282.1| FADH(2)-oxidizing protein [Streptococcus parasanguinis ATCC 15912] Length = 444 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 42/109 (38%), Positives = 55/109 (50%), Gaps = 2/109 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +KK LF AG Sbjct: 288 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTYRSKKQPNLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 Q+ G GY E+AA GLVAGIN+AR + F T + IG + +T Sbjct: 348 QMTGVEGYVESAASGLVAGINAARLFKGEEAAIFPETTA-IGSLAHYIT 395 >gi|315282100|ref|ZP_07870586.1| methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Listeria marthii FSL S4-120] gi|313614252|gb|EFR87910.1| methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO [Listeria marthii FSL S4-120] Length = 146 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 38/93 (40%), Positives = 52/93 (55%), Gaps = 2/93 (2%) Query: 326 IPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLV 384 IPGLE I+R G +IN P L PT + K + LF AGQ+ G GY E+AA GL Sbjct: 7 IPGLENAEIVRYGVMHRNTFINSPTVLEPTYQLKTRNDLFFAGQMTGVEGYVESAASGLA 66 Query: 385 AGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 AGIN+A + + + F ++ IG + +TS Sbjct: 67 AGINAANFVEEKELVVFP-AETAIGSLAHYITS 98 >gi|332360454|gb|EGJ38265.1| tRNA:M(5)U-54 methyltransferase [Streptococcus sanguinis SK355] Length = 444 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 107/422 (25%), Positives = 160/422 (37%), Gaps = 72/422 (17%) Query: 10 VIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGLGKGHLVR 60 VIG G AG EAA AK G L HKT+ + C+ ++ G Sbjct: 8 VIGAGLAGSEAAYQIAKRGIPVKLYEMRGVKSTPQHKTADFAELVCSNSLRG-------- 59 Query: 61 EIDALDGLMGRVADAAGIQFRVLN---VKKGPAVRGPRTQADRELYRLAMQREILSQENL 117 DAL +G + + + R L+ +K A R P A LA+ RE SQ Sbjct: 60 --DALTNAVGLLKE----EMRRLDSVILKAAEATRVPAGGA------LAVDREGFSQMVT 107 Query: 118 DVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 +++ T +I I + + + V+ TG + KI A G Sbjct: 108 ELV--------TNHPLIEVIREEITEIPEDAITVIATGPLTSDAL---AEKIHALNGG-- 154 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTII----WDKTEKQFADERLIPFSFMT--D 231 N F +D + T +D + +DK E + + + FM D Sbjct: 155 ------NGFYFYDAAAPIIDVNT---IDMTKVYLKSRYDKGEAAYLNAPMTKQEFMDFHD 205 Query: 232 KITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKS--YGPRYCPSIEDKIVRFGERN 289 + N + E + + E + + + IK+ YGP +E G R+ Sbjct: 206 ALVNAE-EAPLN--SFEKEKYFEGCMPIEVMAKRGIKTMLYGPMKPVGLEYPDDYQGPRD 262 Query: 290 GH------QIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEY 343 G + L + + G T L Q + + IPGLE +R G Sbjct: 263 GEFKTPYAVVQLRQDNAAGSLYNIVGFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRN 322 Query: 344 DYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFS 402 Y++ P L T +KK LF AGQ+ G GY E+AA GLVA IN+AR + + F Sbjct: 323 SYMDSPNLLEQTFRSKKQPNLFFAGQMTGVEGYVESAASGLVASINAARLFKGEEALVFP 382 Query: 403 RT 404 T Sbjct: 383 ET 384 >gi|313635547|gb|EFS01764.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [Listeria seeligeri FSL N1-067] Length = 101 Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 57/87 (65%) Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 V E+++I+ Y Y + ++ +++K E + IP++ DY ++ L+ E EKL ++P + Sbjct: 10 VAEQVEIQVKYEGYIQKSKLQVEKMKRMEDKKIPENIDYDAISGLATEALEKLKKIEPLS 69 Query: 592 LLQASKIEGMTPAALNLLLIYIKKNTV 618 + QAS+I G+ PA +++LL+YI++ + Sbjct: 70 IAQASRISGVNPADISILLVYIEQGKI 96 >gi|254416490|ref|ZP_05030242.1| tRNA:m(5)U-54 methyltransferase [Microcoleus chthonoplastes PCC 7420] gi|196176694|gb|EDX71706.1| tRNA:m(5)U-54 methyltransferase [Microcoleus chthonoplastes PCC 7420] Length = 452 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE +R G +IN P+ L+PTL+ K L AG Sbjct: 291 GFQTNLRWGEQKRVFRLIPGLENAEFVRMGVMHRNTFINSPELLYPTLQFKNRPTLLAAG 350 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ GT GY A+A G +AG N+AR L+ I T + +G + + ++S Sbjct: 351 QLMGTEGYTAASAGGWLAGTNAARLVLGLEPITLPPT-TMMGALFEFISS 399 >gi|207111185|ref|ZP_03245347.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Helicobacter pylori HPKX_438_CA4C1] Length = 50 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 28/40 (70%), Positives = 33/40 (82%) Query: 403 RTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNA 442 R ++YIGV+IDDL +KG EPYRMFTSRAEYR+ LR DN Sbjct: 9 RNEAYIGVLIDDLVTKGTNEPYRMFTSRAEYRLLLREDNT 48 >gi|312862814|ref|ZP_07723054.1| tRNA:m(5)U-54 methyltransferase [Streptococcus vestibularis F0396] gi|311101674|gb|EFQ59877.1| tRNA:m(5)U-54 methyltransferase [Streptococcus vestibularis F0396] Length = 447 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 1/97 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T ++K LF AG Sbjct: 291 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLKQTFQSKSNPNLFFAG 350 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 Q+ G GY E+AA GLVAGIN+AR + + F +T Sbjct: 351 QMTGVEGYVESAASGLVAGINAARLFKGEEEVIFPQT 387 >gi|218283547|ref|ZP_03489537.1| hypothetical protein EUBIFOR_02127 [Eubacterium biforme DSM 3989] gi|218215815|gb|EEC89353.1| hypothetical protein EUBIFOR_02127 [Eubacterium biforme DSM 3989] Length = 432 Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 39/97 (40%), Positives = 49/97 (50%), Gaps = 1/97 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE + I R G Y++ P L T ++KK LF AG Sbjct: 276 GFQTHLTWPEQRRVFALIPGLENLKITRYGVMHRNSYLSSPVVLKETYQSKKRDDLFFAG 335 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 Q+ G GY E+ A GL+AGIN A + ICF T Sbjct: 336 QLTGVEGYVESCASGLIAGINMALYMQGKEPICFGNT 372 >gi|322516883|ref|ZP_08069782.1| tRNA:M(5)U-54 methyltransferase [Streptococcus vestibularis ATCC 49124] gi|322124583|gb|EFX96060.1| tRNA:M(5)U-54 methyltransferase [Streptococcus vestibularis ATCC 49124] Length = 447 Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 1/97 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T ++K LF AG Sbjct: 291 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLKQTFQSKSNPNLFFAG 350 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 Q+ G GY E+AA GLVAGIN+AR + + F +T Sbjct: 351 QMTGVEGYVESAASGLVAGINAARLFKGEEEVIFPQT 387 >gi|315305257|ref|ZP_07875213.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [Listeria ivanovii FSL F6-596] gi|313626379|gb|EFR95556.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [Listeria ivanovii FSL F6-596] Length = 100 Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 57/87 (65%) Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 V E+++I+ Y Y + ++ +++K E + IP++ DY ++ L+ E EKL ++P + Sbjct: 10 VAEQVEIQVKYEGYIEKSKLQVEKMKRMEDKKIPENIDYDAISGLATEALEKLKKIEPLS 69 Query: 592 LLQASKIEGMTPAALNLLLIYIKKNTV 618 + QAS+I G+ PA +++LL+YI++ + Sbjct: 70 IAQASRISGVNPADISILLVYIEQGKI 96 >gi|302872578|ref|YP_003841214.1| gid protein [Caldicellulosiruptor obsidiansis OB47] gi|302575437|gb|ADL43228.1| gid protein [Caldicellulosiruptor obsidiansis OB47] Length = 436 Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 41/110 (37%), Positives = 59/110 (53%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE +R G + YIN P+ L L KK +F AG Sbjct: 277 GFQTRLKWGEQKRVFRLIPGLENAEFVRYGVMHKNSYINSPEVLTKYLFLKKYPNIFFAG 336 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 QI G GY E+AA G++AGIN+A + + + + + IG +I+ +T+ Sbjct: 337 QITGVEGYLESAATGIIAGINAAMQVLGKEPVSLPPS-TCIGALIEYITT 385 >gi|269798028|ref|YP_003311928.1| gid protein [Veillonella parvula DSM 2008] gi|269094657|gb|ACZ24648.1| gid protein [Veillonella parvula DSM 2008] Length = 438 Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 107/423 (25%), Positives = 156/423 (36%), Gaps = 72/423 (17%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAI--GGL-- 53 +VIVIG G AG EAA A G L H+T + C+ ++ G + Sbjct: 5 NVIVIGAGLAGSEAAWQLANRGIYVDLYEMRPVKSSPAHQTDQFAELVCSNSLRAGNIEN 64 Query: 54 GKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILS 113 G L E+ L ++ ADA + PA G DR L+ + +++ S Sbjct: 65 AVGLLKEEMRRLGSIIMECADATAV----------PA--GGALAVDRHLFSEMVTKKVKS 112 Query: 114 QENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGR 173 N+ V EV E TV+ +G L V K+K G Sbjct: 113 HPNITVHHEEVTEIPIE-----------------GTVIFASGP-LTSVALGDKIKALTGE 154 Query: 174 MG----DSPSNSLFNSFMKFD--FDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFS 227 G D+ + + + +D F R G D + TE+++ + Sbjct: 155 TGFYFYDAAAPIVTAESLNYDKVFAASRYDKG-----DADYLNCPMTEEEYK-------A 202 Query: 228 FMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSG---DIKSYGPRYCPSIEDKIVR 284 F + T ++ + E I E I + D YGP + DK R Sbjct: 203 FWHELTTAEAVQP----KDFEK-EIYFEGCMPVEIMASRGEDTLRYGPLKPVGLVDK--R 255 Query: 285 FGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYD 344 E + + L E + G T L Q + IPGLE + IR G Sbjct: 256 TNEESYAVVQLRKENKEGTMFNLVGFQTHLKWGEQKRVFGMIPGLENADFIRYGVMHRNT 315 Query: 345 YINPKELF-PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSR 403 YIN EL + KK LF AGQ+ G GY E+AA GL+ G+ R + I F + Sbjct: 316 YINSPELLNHAFQLKKEPRLFFAGQMTGVEGYLESAASGLMVGLQVDRYLEEQPFIEFPK 375 Query: 404 TDS 406 T + Sbjct: 376 TTA 378 >gi|116072996|ref|ZP_01470258.1| glucose-inhibited division protein A [Synechococcus sp. RS9916] gi|116068301|gb|EAU74053.1| glucose-inhibited division protein A [Synechococcus sp. RS9916] Length = 453 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 43/126 (34%), Positives = 62/126 (49%), Gaps = 2/126 (1%) Query: 267 IKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTI 326 I + PR+ + D+ VR +R + L E + + G T L Q + +R I Sbjct: 253 IGLWDPRWG-DVNDRDVRRAKRAYAVVQLRQEDKDGRLWNLVGFQTNLKWGEQKRVLRLI 311 Query: 327 PGLEKVNIIRPGYAIEYDYINPKELF-PTLETKKISGLFLAGQINGTTGYEEAAAQGLVA 385 PGLE+ +R G ++ EL PTL+ ++ L AGQI GT GY A A G +A Sbjct: 312 PGLEEAEFVRFGVMHRNTFLEAPELLEPTLQFRRRERLLAAGQITGTEGYAAAVAGGWLA 371 Query: 386 GINSAR 391 G N+AR Sbjct: 372 GTNAAR 377 >gi|293365193|ref|ZP_06611910.1| glucose-inhibited division protein Gid [Streptococcus oralis ATCC 35037] gi|291316643|gb|EFE57079.1| glucose-inhibited division protein Gid [Streptococcus oralis ATCC 35037] Length = 466 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 37/84 (44%), Positives = 46/84 (54%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +KK LF AG Sbjct: 310 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTYRSKKQPNLFFAG 369 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GLVAGIN+AR Sbjct: 370 QMTGVEGYVESAASGLVAGINAAR 393 >gi|322392102|ref|ZP_08065564.1| tRNA:M(5)U-54 methyltransferase [Streptococcus peroris ATCC 700780] gi|321145002|gb|EFX40401.1| tRNA:M(5)U-54 methyltransferase [Streptococcus peroris ATCC 700780] Length = 456 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 37/84 (44%), Positives = 46/84 (54%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +KK LF AG Sbjct: 300 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTYRSKKQPNLFFAG 359 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GLVAGIN+AR Sbjct: 360 QMTGVEGYVESAASGLVAGINAAR 383 >gi|87302334|ref|ZP_01085159.1| glucose-inhibited division protein A [Synechococcus sp. WH 5701] gi|87283259|gb|EAQ75215.1| glucose-inhibited division protein A [Synechococcus sp. WH 5701] Length = 453 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 47/146 (32%), Positives = 70/146 (47%), Gaps = 3/146 (2%) Query: 267 IKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTI 326 I + PR+ + D+ VR +R + L E + + G T L Q + +R I Sbjct: 248 IGLWDPRWG-DLHDRDVRRAKRAYAVVQLRQEDRDGRLWNLVGFQTNLKWGEQKRVLRLI 306 Query: 327 PGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVA 385 PGLE +R G ++ P+ L PTL+ ++ L AGQI GT GY A A G +A Sbjct: 307 PGLENAEFVRFGVMHRNTFLEAPQLLDPTLQFRQRPTLLAAGQITGTEGYAAAVAGGWLA 366 Query: 386 GINSARKSNKLDCICFSRTDSYIGVM 411 G N+AR ++ I T + IG + Sbjct: 367 GTNAARLAHGRSPIALPPT-TMIGAL 391 >gi|301794083|emb|CBW36489.1| protein Gid homolog [Streptococcus pneumoniae INV104] gi|332204945|gb|EGJ19010.1| tRNA:m(5)U-54 methyltransferase [Streptococcus pneumoniae GA47901] Length = 444 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/84 (44%), Positives = 46/84 (54%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +KK LF AG Sbjct: 288 GFQTHLKWGEQKRIFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTYRSKKQPNLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GLVAGIN+AR Sbjct: 348 QMTGVEGYVESAASGLVAGINAAR 371 >gi|301801784|emb|CBW34495.1| protein Gid homolog [Streptococcus pneumoniae INV200] Length = 444 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/84 (44%), Positives = 46/84 (54%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +KK LF AG Sbjct: 288 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLGQTYRSKKQPNLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GLVAGIN+AR Sbjct: 348 QMTGVEGYVESAASGLVAGINAAR 371 >gi|78184998|ref|YP_377433.1| tRNA (uracil-5-)-methyltransferase Gid [Synechococcus sp. CC9902] gi|123581324|sp|Q3AX63|TRMFO_SYNS9 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|78169292|gb|ABB26389.1| Gid protein [Synechococcus sp. CC9902] Length = 460 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 45/139 (32%), Positives = 66/139 (47%), Gaps = 2/139 (1%) Query: 267 IKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTI 326 I + PR+ + D+ VR +R + L E + + G T L Q + ++ I Sbjct: 257 IGLWDPRWG-DVNDRDVRRAKRAYAVVQLRQEDKDGRLWNLVGFQTNLKWGEQRRVLQMI 315 Query: 327 PGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVA 385 PGL + +R G ++ +P+ L PTL+ + L AGQI GT GY A A G +A Sbjct: 316 PGLAQAEFVRFGVMHRNTFLESPQLLDPTLQFRTRRHLLAAGQITGTEGYAAAVAGGWLA 375 Query: 386 GINSARKSNKLDCICFSRT 404 G N+AR LD I T Sbjct: 376 GTNAARLVRGLDPIALPNT 394 >gi|322388011|ref|ZP_08061618.1| tRNA:M(5)U-54 methyltransferase [Streptococcus infantis ATCC 700779] gi|321141284|gb|EFX36782.1| tRNA:M(5)U-54 methyltransferase [Streptococcus infantis ATCC 700779] Length = 444 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/84 (44%), Positives = 46/84 (54%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +KK LF AG Sbjct: 288 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTYRSKKQPNLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GLVAGIN+AR Sbjct: 348 QMTGVEGYVESAASGLVAGINAAR 371 >gi|289167791|ref|YP_003446060.1| Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Streptococcus mitis B6] gi|288907358|emb|CBJ22195.1| Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Streptococcus mitis B6] Length = 456 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/84 (44%), Positives = 46/84 (54%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +KK LF AG Sbjct: 300 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTYRSKKQPNLFFAG 359 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GLVAGIN+AR Sbjct: 360 QMTGVEGYVESAASGLVAGINAAR 383 >gi|307708581|ref|ZP_07645045.1| tRNA:M(5)U-54 methyltransferase [Streptococcus mitis NCTC 12261] gi|307615330|gb|EFN94539.1| tRNA:M(5)U-54 methyltransferase [Streptococcus mitis NCTC 12261] Length = 444 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/84 (44%), Positives = 46/84 (54%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +KK LF AG Sbjct: 288 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTYRSKKQPNLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GLVAGIN+AR Sbjct: 348 QMTGVEGYVESAASGLVAGINAAR 371 >gi|332076222|gb|EGI86688.1| tRNA:m(5)U-54 methyltransferase [Streptococcus pneumoniae GA41301] Length = 444 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/84 (44%), Positives = 46/84 (54%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +KK LF AG Sbjct: 288 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTYRSKKQPNLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GLVAGIN+AR Sbjct: 348 QMTGVEGYVESAASGLVAGINAAR 371 >gi|306829300|ref|ZP_07462490.1| tRNA:M(5)U-54 methyltransferase [Streptococcus mitis ATCC 6249] gi|304428386|gb|EFM31476.1| tRNA:M(5)U-54 methyltransferase [Streptococcus mitis ATCC 6249] Length = 444 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/84 (44%), Positives = 46/84 (54%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +KK LF AG Sbjct: 288 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTYRSKKQPNLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GLVAGIN+AR Sbjct: 348 QMTGVEGYVESAASGLVAGINAAR 371 >gi|225858738|ref|YP_002740248.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus pneumoniae 70585] gi|254789178|sp|C1C6S2|TRMFO_STRP7 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|225720385|gb|ACO16239.1| tRNA:M(5)U-54 methyltransferase [Streptococcus pneumoniae 70585] Length = 444 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/84 (44%), Positives = 46/84 (54%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +KK LF AG Sbjct: 288 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTYRSKKQPNLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GLVAGIN+AR Sbjct: 348 QMTGVEGYVESAASGLVAGINAAR 371 >gi|307709129|ref|ZP_07645588.1| tRNA:m(5)U-54 methyltransferase [Streptococcus mitis SK564] gi|322376442|ref|ZP_08050935.1| tRNA:M(5)U-54 methyltransferase [Streptococcus sp. M334] gi|307620075|gb|EFN99192.1| tRNA:m(5)U-54 methyltransferase [Streptococcus mitis SK564] gi|321282249|gb|EFX59256.1| tRNA:M(5)U-54 methyltransferase [Streptococcus sp. M334] Length = 444 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/84 (44%), Positives = 46/84 (54%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +KK LF AG Sbjct: 288 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTYRSKKQPNLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GLVAGIN+AR Sbjct: 348 QMTGVEGYVESAASGLVAGINAAR 371 >gi|331266590|ref|YP_004326220.1| tRNA (uracil-5-)-methyltransferase [Streptococcus oralis Uo5] gi|326683262|emb|CBZ00880.1| tRNA (uracil-5-)-methyltransferase [Streptococcus oralis Uo5] Length = 444 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/84 (44%), Positives = 46/84 (54%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +KK LF AG Sbjct: 288 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTYRSKKQPNLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GLVAGIN+AR Sbjct: 348 QMTGVEGYVESAASGLVAGINAAR 371 >gi|303254410|ref|ZP_07340516.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus pneumoniae BS455] gi|302598577|gb|EFL65617.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus pneumoniae BS455] Length = 444 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/84 (44%), Positives = 46/84 (54%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +KK LF AG Sbjct: 288 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTYRSKKQPNLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GLVAGIN+AR Sbjct: 348 QMTGVEGYVESAASGLVAGINAAR 371 >gi|182683887|ref|YP_001835634.1| glucose-inhibited division protein A [Streptococcus pneumoniae CGSP14] gi|182629221|gb|ACB90169.1| glucose-inhibited division protein A [Streptococcus pneumoniae CGSP14] Length = 468 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/84 (44%), Positives = 46/84 (54%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +KK LF AG Sbjct: 312 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTYRSKKQPNLFFAG 371 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GLVAGIN+AR Sbjct: 372 QMTGVEGYVESAASGLVAGINAAR 395 >gi|149010413|ref|ZP_01831784.1| glucose-inhibited division protein A [Streptococcus pneumoniae SP19-BS75] gi|303259853|ref|ZP_07345828.1| glucose-inhibited division protein A [Streptococcus pneumoniae SP-BS293] gi|303262267|ref|ZP_07348211.1| glucose-inhibited division protein A [Streptococcus pneumoniae SP14-BS292] gi|303264689|ref|ZP_07350607.1| glucose-inhibited division protein A [Streptococcus pneumoniae BS397] gi|303267218|ref|ZP_07353083.1| glucose-inhibited division protein A [Streptococcus pneumoniae BS457] gi|303269504|ref|ZP_07355269.1| glucose-inhibited division protein A [Streptococcus pneumoniae BS458] gi|26006770|sp|Q97R84|TRMFO_STRPN RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|205830456|sp|B2IP98|TRMFO_STRPS RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|147764894|gb|EDK71823.1| glucose-inhibited division protein A [Streptococcus pneumoniae SP19-BS75] gi|302636590|gb|EFL67081.1| glucose-inhibited division protein A [Streptococcus pneumoniae SP14-BS292] gi|302639058|gb|EFL69518.1| glucose-inhibited division protein A [Streptococcus pneumoniae SP-BS293] gi|302640940|gb|EFL71322.1| glucose-inhibited division protein A [Streptococcus pneumoniae BS458] gi|302643227|gb|EFL73509.1| glucose-inhibited division protein A [Streptococcus pneumoniae BS457] gi|302645776|gb|EFL76005.1| glucose-inhibited division protein A [Streptococcus pneumoniae BS397] Length = 444 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/84 (44%), Positives = 46/84 (54%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +KK LF AG Sbjct: 288 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTYRSKKQPNLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GLVAGIN+AR Sbjct: 348 QMTGVEGYVESAASGLVAGINAAR 371 >gi|322374518|ref|ZP_08049032.1| tRNA:M(5)U-54 methyltransferase [Streptococcus sp. C300] gi|321280018|gb|EFX57057.1| tRNA:M(5)U-54 methyltransferase [Streptococcus sp. C300] Length = 444 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/84 (44%), Positives = 46/84 (54%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +KK LF AG Sbjct: 288 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTYRSKKQPNLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GLVAGIN+AR Sbjct: 348 QMTGVEGYVESAASGLVAGINAAR 371 >gi|270292951|ref|ZP_06199162.1| Gid protein [Streptococcus sp. M143] gi|270278930|gb|EFA24776.1| Gid protein [Streptococcus sp. M143] Length = 456 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/84 (44%), Positives = 46/84 (54%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +KK LF AG Sbjct: 300 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTYRSKKQPNLFFAG 359 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GLVAGIN+AR Sbjct: 360 QMTGVEGYVESAASGLVAGINAAR 383 >gi|160915176|ref|ZP_02077389.1| hypothetical protein EUBDOL_01184 [Eubacterium dolichum DSM 3991] gi|158432975|gb|EDP11264.1| hypothetical protein EUBDOL_01184 [Eubacterium dolichum DSM 3991] Length = 431 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 41/109 (37%), Positives = 56/109 (51%), Gaps = 2/109 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE V+I+R G Y+ PK L PT + LF AG Sbjct: 276 GFQTHLKWGEQKRILSMIPGLENVSIVRYGVMHRNSYLCAPKVLRPTYQHCTRDDLFFAG 335 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 Q+ G GY E+AA GL+AG+N A C+ T +G M++ +T Sbjct: 336 QLCGVEGYVESAASGLLAGLNMANLIRGKACVELPST-CVMGSMVNYIT 383 >gi|307706444|ref|ZP_07643253.1| tRNA:m(5)U-54 methyltransferase [Streptococcus mitis SK321] gi|307618154|gb|EFN97312.1| tRNA:m(5)U-54 methyltransferase [Streptococcus mitis SK321] Length = 444 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/84 (44%), Positives = 46/84 (54%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +KK LF AG Sbjct: 288 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTYRSKKQPNLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GLVAGIN+AR Sbjct: 348 QMTGVEGYVESAASGLVAGINAAR 371 >gi|306825444|ref|ZP_07458784.1| tRNA:M(5)U-54 methyltransferase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432382|gb|EFM35358.1| tRNA:M(5)U-54 methyltransferase [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 444 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/84 (44%), Positives = 46/84 (54%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +KK LF AG Sbjct: 288 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTYRSKKQPNLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GLVAGIN+AR Sbjct: 348 QMTGVEGYVESAASGLVAGINAAR 371 >gi|116072431|ref|ZP_01469698.1| glucose-inhibited division protein A [Synechococcus sp. BL107] gi|116064953|gb|EAU70712.1| glucose-inhibited division protein A [Synechococcus sp. BL107] Length = 460 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 45/139 (32%), Positives = 66/139 (47%), Gaps = 2/139 (1%) Query: 267 IKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTI 326 I + PR+ + D+ VR +R + L E + + G T L Q + ++ I Sbjct: 257 IGLWDPRWG-DVNDRDVRRAKRAYAVVQLRQEDKDGRLWNLVGFQTNLKWGEQKRVLQMI 315 Query: 327 PGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVA 385 PGL + +R G ++ +P+ L PTL+ + L AGQI GT GY A A G +A Sbjct: 316 PGLAQAEFVRFGVMHRNTFLESPQLLDPTLQFRTRRHLLAAGQITGTEGYAAAVAGGWLA 375 Query: 386 GINSARKSNKLDCICFSRT 404 G N+AR LD I T Sbjct: 376 GTNAARLVRGLDPIALPNT 394 >gi|315612954|ref|ZP_07887865.1| tRNA:M(5)U-54 methyltransferase [Streptococcus sanguinis ATCC 49296] gi|315315064|gb|EFU63105.1| tRNA:M(5)U-54 methyltransferase [Streptococcus sanguinis ATCC 49296] Length = 444 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/84 (44%), Positives = 46/84 (54%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +KK LF AG Sbjct: 288 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTYRSKKQPNLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GLVAGIN+AR Sbjct: 348 QMTGVEGYVESAASGLVAGINAAR 371 >gi|21910357|ref|NP_664625.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus pyogenes MGAS315] gi|28895934|ref|NP_802284.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus pyogenes SSI-1] gi|21904554|gb|AAM79428.1| putative glucose-inhibited division protein [Streptococcus pyogenes MGAS315] gi|28811184|dbj|BAC64117.1| putative glucose-inhibited division protein [Streptococcus pyogenes SSI-1] Length = 494 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 1/99 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +++ L AG Sbjct: 337 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLTETFQSRSNPNLLFAG 396 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDS 406 Q+ G GY E+AA GLVAGIN+AR + + + F +T + Sbjct: 397 QMTGVEGYVESAASGLVAGINAARLFKREEALIFPQTTA 435 >gi|15900822|ref|NP_345426.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus pneumoniae TIGR4] gi|111658058|ref|ZP_01408760.1| hypothetical protein SpneT_02000791 [Streptococcus pneumoniae TIGR4] gi|14972418|gb|AAK75066.1| Gid protein [Streptococcus pneumoniae TIGR4] Length = 456 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/84 (44%), Positives = 46/84 (54%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +KK LF AG Sbjct: 300 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTYRSKKQPNLFFAG 359 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GLVAGIN+AR Sbjct: 360 QMTGVEGYVESAASGLVAGINAAR 383 >gi|307703731|ref|ZP_07640672.1| tRNA:m(5)U-54 methyltransferase [Streptococcus oralis ATCC 35037] gi|307622566|gb|EFO01562.1| tRNA:m(5)U-54 methyltransferase [Streptococcus oralis ATCC 35037] Length = 444 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/84 (44%), Positives = 46/84 (54%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +KK LF AG Sbjct: 288 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTYRSKKQPNLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GLVAGIN+AR Sbjct: 348 QMTGVEGYVESAASGLVAGINAAR 371 >gi|86607553|ref|YP_476315.1| tRNA (uracil-5-)-methyltransferase Gid [Synechococcus sp. JA-2-3B'a(2-13)] gi|123504233|sp|Q2JQ64|TRMFO_SYNJB RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|86556095|gb|ABD01052.1| gid protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 459 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 104/434 (23%), Positives = 166/434 (38%), Gaps = 74/434 (17%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTAL---------ITHKTSTIGSMSCNPAIGGLGK--- 55 + V+GGG AG EAA A+ G L H T +G + C+ + G Sbjct: 22 IHVVGGGLAGTEAAWQIAQAGLPVILSEMRPVRQSPAHHTDQLGELVCSNSFGAAASDRA 81 Query: 56 -GHLVREIDALDGLMGRVADA----AGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQRE 110 G L E+ L L+ AD AG V + A+ T+A + R+ ++RE Sbjct: 82 AGLLKEELRQLGSLVIATADCHAVPAGGALAVDRARFSQAL----TEAIQNHPRITLRRE 137 Query: 111 ILSQ--ENLDVI-QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKL 167 +++ E + V+ G + K + + ++ S S+ ++T + R V+ Sbjct: 138 EVTEIPEGIAVLCTGPLTSDPLAKALQAFTGLEYLSFFDASSPIVTGDSLNRAVV----- 192 Query: 168 KIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFS 227 F R G A L+ TE ++ ER Sbjct: 193 -----------------------FQASRYDKGEAAYLNCPM-----TEAEY--ERFWRAL 222 Query: 228 FMTDKITNRQIECGITRTNLETHRIIMEN---IKHSAIYSGDIKSYGPRYCPSIEDKIVR 284 ++ + E R E I+ A D +GP + D R Sbjct: 223 VEAEQAPLKDFE--------REERKFFEGCLPIEEMARRGKDTLCFGPLKPVGLVDP--R 272 Query: 285 FGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYD 344 G R + L E + G T L Q + R IPGLE+ +R G Sbjct: 273 TGSRPYAVVQLRQEDKAGQLWNLVGFQTNLKWGEQQRVFRLIPGLEQAEFVRFGVMHRNT 332 Query: 345 YIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSR 403 ++N P+ L+PTL+ ++ LF AGQ+ GT GY A A G +AG N+AR + L I Sbjct: 333 FLNSPQLLWPTLQFRRRPTLFAAGQLVGTEGYACAVAGGWLAGQNAARLALGLPLITLP- 391 Query: 404 TDSYIGVMIDDLTS 417 ++ +G + ++S Sbjct: 392 PETMMGSLFQFISS 405 >gi|228476748|ref|ZP_04061414.1| tRNA:M(5)U-54 methyltransferase [Streptococcus salivarius SK126] gi|228251619|gb|EEK10720.1| tRNA:M(5)U-54 methyltransferase [Streptococcus salivarius SK126] Length = 447 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 38/99 (38%), Positives = 51/99 (51%), Gaps = 1/99 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T ++K LF AG Sbjct: 291 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLKQTFQSKSNPNLFFAG 350 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDS 406 Q+ G GY E+AA GLVAGIN+AR + + F T + Sbjct: 351 QMTGVEGYVESAASGLVAGINAARLFKGEEELIFPHTTA 389 >gi|26006761|sp|Q8K7G4|TRMFO_STRP3 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase Length = 448 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 1/97 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +++ L AG Sbjct: 291 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLTETFQSRSNPNLLFAG 350 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 Q+ G GY E+AA GLVAGIN+AR + + + F +T Sbjct: 351 QMTGVEGYVESAASGLVAGINAARLFKREEALIFPQT 387 >gi|309775659|ref|ZP_07670658.1| tRNA:M(5)U-54 methyltransferase [Erysipelotrichaceae bacterium 3_1_53] gi|308916565|gb|EFP62306.1| tRNA:M(5)U-54 methyltransferase [Erysipelotrichaceae bacterium 3_1_53] Length = 431 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 43/109 (39%), Positives = 56/109 (51%), Gaps = 2/109 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLEKV+I+R G Y+ PK L T + + LF AG Sbjct: 276 GFQTHLKWGEQKRLLSMIPGLEKVSIVRYGVMHRNSYLCAPKVLRATYQHIERDDLFFAG 335 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 Q+ G GY E+AA GL+AG+N A + CI T IG M +T Sbjct: 336 QLCGVEGYVESAASGLLAGLNMANLMREKRCIELPDT-CVIGSMAHYIT 383 >gi|39997642|ref|NP_953593.1| tRNA (uracil-5-)-methyltransferase Gid [Geobacter sulfurreducens PCA] gi|50400233|sp|Q74A44|TRMFO_GEOSL RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|39984534|gb|AAR35920.1| gid protein [Geobacter sulfurreducens PCA] gi|298506582|gb|ADI85305.1| tRNA (5-methyl-U54)-methylenetransferase/reductase [Geobacter sulfurreducens KN400] Length = 434 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 99/404 (24%), Positives = 148/404 (36%), Gaps = 66/404 (16%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTAL---------ITHKTSTIGSMSCNPAIGGL----G 54 V +IGGG AGCEAA A G L H S + + C+ ++ G Sbjct: 5 VTIIGGGLAGCEAAWQIAGRGVRVVLREMKPQRYSPAHHLSGLAELVCSNSLRGESLENA 64 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L E+ L+ ADA + PA G DREL+ + I Sbjct: 65 VGLLKEELRRAGSLIMAAADATRV----------PA--GGALAVDRELFSSYVTERIEGH 112 Query: 115 ENLDVIQGEVAGFNTEKNII--SSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAG 172 +++++ EV E ++ S + D R + + F + I Sbjct: 113 PLIELVREEVTELPAEGVLVIASGPLTSDALAERLKQITGDSLYFYDAIAPI-------- 164 Query: 173 RMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTII-WDKTEKQFADERLIPFSFMTD 231 ++SL + + F R G DG + +E+++ ER + + Sbjct: 165 ----VAADSLDSDKV---FRASRYGKG-----DGDDYLNCPLSEEEY--ERFVDAVLAAE 210 Query: 232 KITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYG---PRYCPSIEDKIVRFGER 288 K+ R E + + E + + + G +K G PR +V+ Sbjct: 211 KVPARDFEKVVHFEGCMPVEEMAERGRETLRF-GPLKPVGLTDPRTGRE-PHAVVQLRAE 268 Query: 289 NGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN- 347 N G T + +P Q + R IPGLE +R G +IN Sbjct: 269 NREGTLFNLVGFQTKLTWPE----------QRRVFRMIPGLESAEFVRLGSMHRNTFINA 318 Query: 348 PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSAR 391 P L PT K F AGQI G GY E+A G +AGINSAR Sbjct: 319 PTLLEPTFRLKGDPRTFFAGQITGVEGYVESAGSGFLAGINSAR 362 >gi|294791908|ref|ZP_06757056.1| tRNA:M(5)U-54 methyltransferase [Veillonella sp. 6_1_27] gi|294457138|gb|EFG25500.1| tRNA:M(5)U-54 methyltransferase [Veillonella sp. 6_1_27] Length = 438 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 105/423 (24%), Positives = 156/423 (36%), Gaps = 72/423 (17%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAI--GGL-- 53 +VIVIG G AG EAA A G L H+T + C+ ++ G + Sbjct: 5 NVIVIGAGLAGSEAAWQLANRGIHVDLYEMRPVKSSPAHQTDQFAELVCSNSLRAGNIEN 64 Query: 54 GKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILS 113 G L E+ L ++ ADA + PA G DR L+ + +++ Sbjct: 65 AVGLLKEEMRRLGSIIMECADATAV----------PA--GGALAVDRHLFSEMVTKKVKG 112 Query: 114 QENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGR 173 N+ V EV TE +TV+ +G + K+K G Sbjct: 113 HPNITVHLEEVTELPTE-----------------ATVIFASGPLTSEALG-DKIKALTGE 154 Query: 174 MG----DSPSNSLFNSFMKFD--FDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFS 227 G D+ + + + +D F R G D + TE+++ + Sbjct: 155 TGFYFYDAAAPIVTAESLNYDKVFAASRYDKG-----DADYLNCPMTEEEYK-------A 202 Query: 228 FMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSG---DIKSYGPRYCPSIEDKIVR 284 F + T ++ + E I E I + D YGP + DK R Sbjct: 203 FWHELTTAEAVQP----KDFEK-EIYFEGCMPVEIMASRGEDTLRYGPLKPVGLVDK--R 255 Query: 285 FGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYD 344 E + + L E + G T L Q + IPGLE + IR G Sbjct: 256 TDEESYAVVQLRKENKEGTMFNLVGFQTHLKWGEQKRVFGMIPGLENADFIRYGVMHRNT 315 Query: 345 YINPKELF-PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSR 403 YIN EL + KK LF AGQ+ G GY E+AA GL+ G+ R + I F + Sbjct: 316 YINSPELLNHAFQLKKEPRLFFAGQMTGVEGYLESAASGLMVGLQVDRYLEEQPFIEFPK 375 Query: 404 TDS 406 T + Sbjct: 376 TTA 378 >gi|329115799|ref|ZP_08244516.1| tRNA:m(5)U-54 methyltransferase [Streptococcus parauberis NCFD 2020] gi|326906204|gb|EGE53118.1| tRNA:m(5)U-54 methyltransferase [Streptococcus parauberis NCFD 2020] Length = 444 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/99 (37%), Positives = 51/99 (51%), Gaps = 1/99 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +++ LF AG Sbjct: 288 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEETFQSRANQNLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDS 406 Q+ G GY E+AA GLVAGIN+AR + + F T + Sbjct: 348 QMTGVEGYVESAASGLVAGINAARLFKGEEKVVFPSTTA 386 Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust. Identities = 42/136 (30%), Positives = 62/136 (45%), Gaps = 26/136 (19%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGG 52 +++SY + +IG G AG EAA AK G L HKTS + C+ + G Sbjct: 1 MSQSY-INIIGAGLAGSEAAYQIAKRGIPVKLYEMRGVKSTPQHKTSNFAELVCSNSFRG 59 Query: 53 ----LGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQ 108 G L E+ LD ++ R AG + RV PA G DRE Y ++ Sbjct: 60 DSLTNAVGLLKEEMRRLDSIIMR----AGEKHRV------PA--GGAMAVDREGYAESVT 107 Query: 109 REILSQENLDVIQGEV 124 E+ + ++VI+GE+ Sbjct: 108 TELENNPLIEVIRGEI 123 >gi|302035679|ref|YP_003796001.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gid [Candidatus Nitrospira defluvii] gi|300603743|emb|CBK40075.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gid [Candidatus Nitrospira defluvii] Length = 438 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 40/111 (36%), Positives = 53/111 (47%), Gaps = 11/111 (9%) Query: 282 IVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAI 341 +V+ N H G T + YP Q + R IPGLE +R G Sbjct: 262 VVQLRTENAHGTCYNMVGFQTKLTYPE----------QRRVFRLIPGLENAEFLRLGSLH 311 Query: 342 EYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSAR 391 +IN P+ L TL+ K +F AGQ+ G GY E+AA G +AGIN+AR Sbjct: 312 RNTFINSPQLLRDTLQLKSRGTVFFAGQLVGVEGYTESAAMGGIAGINAAR 362 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 25/131 (19%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGL---- 53 D+++IGGG AG EAA AA GA L HKT + + C+ ++G Sbjct: 4 DIVIIGGGLAGTEAAWQAANRGAKVTLYEMRPKEMTKAHKTGDLAELVCSNSLGSADPLN 63 Query: 54 GKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILS 113 G L E+ L+ L+ R A+ A + PA G DRE + + + + Sbjct: 64 APGILKTEMRRLNSLVIRAAEEARV----------PA--GSALAVDREQFARVITQALEG 111 Query: 114 QENLDVIQGEV 124 N+ +++ EV Sbjct: 112 HPNIRIMREEV 122 >gi|154249431|ref|YP_001410256.1| tRNA (uracil-5-)-methyltransferase Gid [Fervidobacterium nodosum Rt17-B1] gi|205830334|sp|A7HL16|TRMFO_FERNB RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|154153367|gb|ABS60599.1| gid protein [Fervidobacterium nodosum Rt17-B1] Length = 430 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 53/159 (33%), Positives = 72/159 (45%), Gaps = 4/159 (2%) Query: 266 DIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRT 325 D YGP I D + G+ I L E + + G T L Q + I+ Sbjct: 237 DAMRYGPLRPVGIVDP--KTGKEPYAVIQLRKENVEGTMYNIVGFQTRLKWGEQRRIIQL 294 Query: 326 IPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLV 384 IPGLE I+R G YI+ PK L L KK+ +F AGQI G GY E+A GL Sbjct: 295 IPGLENAEILRYGVMHRNSYIDSPKVLDEYLRLKKMPNVFFAGQITGVEGYVESAMTGLY 354 Query: 385 AGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 G+N +R D I F + G ++ +T+ L+P Sbjct: 355 VGLNISRLILGKDMIKFPE-KTMCGALVRYITTAPELKP 392 >gi|149002492|ref|ZP_01827426.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus pneumoniae SP14-BS69] gi|237650521|ref|ZP_04524773.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus pneumoniae CCRI 1974] gi|237820811|ref|ZP_04596656.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus pneumoniae CCRI 1974M2] gi|147759429|gb|EDK66421.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus pneumoniae SP14-BS69] Length = 444 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 38/97 (39%), Positives = 49/97 (50%), Gaps = 1/97 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +KK LF AG Sbjct: 288 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTYRSKKQPNLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 Q+ G GY E+AA GLVAGIN+ R + + F T Sbjct: 348 QMTGVEGYVESAASGLVAGINAVRLFKEESEVIFPET 384 >gi|294793768|ref|ZP_06758905.1| tRNA:M(5)U-54 methyltransferase [Veillonella sp. 3_1_44] gi|294455338|gb|EFG23710.1| tRNA:M(5)U-54 methyltransferase [Veillonella sp. 3_1_44] Length = 438 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 105/423 (24%), Positives = 156/423 (36%), Gaps = 72/423 (17%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAI--GGL-- 53 +VIVIG G AG EAA A G L H+T + C+ ++ G + Sbjct: 5 NVIVIGAGLAGSEAAWQLANRGIHVDLYEMRPVKSSPAHQTDQFAELVCSNSLRAGNIEN 64 Query: 54 GKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILS 113 G L E+ L ++ ADA + PA G DR L+ + +++ Sbjct: 65 AVGLLKEEMRRLGSIIMECADATAV----------PA--GGALAVDRHLFSEMVTKKVKG 112 Query: 114 QENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGR 173 N+ V EV TE +TV+ +G + K+K G Sbjct: 113 HPNITVHLEEVTELPTE-----------------ATVIFASGPLTSEALG-DKIKALTGE 154 Query: 174 MG----DSPSNSLFNSFMKFD--FDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFS 227 G D+ + + + +D F R G D + TE+++ + Sbjct: 155 TGFYFYDAAAPIVTAESLNYDKVFAASRYDKG-----DADYLNCPMTEEEYK-------A 202 Query: 228 FMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSG---DIKSYGPRYCPSIEDKIVR 284 F + T ++ + E I E I + D YGP + DK R Sbjct: 203 FWHELTTAEAVQP----KDFEK-EIYFEGCMPVEIMASRGEDTLRYGPLKPVGLVDK--R 255 Query: 285 FGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYD 344 E + + L E + G T L Q + IPGLE + IR G Sbjct: 256 TDEESYAVVQLRKENKEGTMFNLVGFQTHLKWGEQKRVFGMIPGLENADFIRYGVMHRNT 315 Query: 345 YINPKELF-PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSR 403 YIN EL + KK LF AGQ+ G GY E+AA GL+ G+ R + I F + Sbjct: 316 YINSPELLNHAFQLKKEPRLFFAGQMTGVEGYLESAASGLMVGLQVDRYLEEQPFIEFPK 375 Query: 404 TDS 406 T + Sbjct: 376 TTA 378 >gi|332522955|ref|ZP_08399207.1| tRNA:m(5)U-54 methyltransferase [Streptococcus porcinus str. Jelinkova 176] gi|332314219|gb|EGJ27204.1| tRNA:m(5)U-54 methyltransferase [Streptococcus porcinus str. Jelinkova 176] Length = 444 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/99 (37%), Positives = 51/99 (51%), Gaps = 1/99 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +++ LF AG Sbjct: 288 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLKQTFQSRANDNLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDS 406 Q+ G GY E+AA GLVAGIN+A+K + F T + Sbjct: 348 QMTGVEGYVESAASGLVAGINAAKKFKGEAEVIFPETTA 386 >gi|172035700|ref|YP_001802201.1| tRNA (uracil-5-)-methyltransferase Gid [Cyanothece sp. ATCC 51142] gi|205830330|sp|B1WR77|TRMFO_CYAA5 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|171697154|gb|ACB50135.1| gid protein [Cyanothece sp. ATCC 51142] Length = 460 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE +R G +IN P+ L PTL+ K L AG Sbjct: 293 GFQTNLKWGEQKRVFRLIPGLENAEFVRMGVMHRNTFINSPQLLDPTLQFKSRPTLLAAG 352 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ GT GY A+A G +AG N+AR + L+ I T + +G + + ++S Sbjct: 353 QLIGTEGYTAASAGGWLAGTNAARIALGLEPISLPST-TMMGALFEFISS 401 >gi|94266015|ref|ZP_01289737.1| Gid protein [delta proteobacterium MLMS-1] gi|93453444|gb|EAT03863.1| Gid protein [delta proteobacterium MLMS-1] Length = 438 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q + +R IPGLEK R G ++N P+ L P+L+ + LAG Sbjct: 280 GFQTKMTHPAQQRVLRLIPGLEKAEFARLGSIHRNTFVNAPRVLRPSLQLIARDDILLAG 339 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q++G GY E+AA GL+AG+N+AR Sbjct: 340 QLSGVEGYVESAAGGLLAGLNAAR 363 >gi|315932331|gb|EFV11274.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Campylobacter jejuni subsp. jejuni 327] Length = 93 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 33/76 (43%), Positives = 50/76 (65%) Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E+ Y Y Q + +++K + IP++FD+ S+ LSNE+ EKL+ KP + AS+I Sbjct: 12 EAKYYHYISMQKAQVEKMKNLSELKIPENFDFKSVSGLSNEVVEKLNHHKPPTIFAASQI 71 Query: 599 EGMTPAALNLLLIYIK 614 G+TPAAL++L IYIK Sbjct: 72 SGITPAALDILQIYIK 87 >gi|94264650|ref|ZP_01288432.1| Glucose-inhibited division protein A [delta proteobacterium MLMS-1] gi|93454881|gb|EAT05125.1| Glucose-inhibited division protein A [delta proteobacterium MLMS-1] Length = 226 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q + +R IPGLEK R G ++N P+ L P+L+ + LAG Sbjct: 68 GFQTKMTHPAQQRVLRLIPGLEKAEFARLGSIHRNTFVNAPRVLRPSLQLIARDDILLAG 127 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q++G GY E+AA GL+AG+N+AR + + + G +I LT+ Sbjct: 128 QLSGVEGYVESAAGGLLAGLNAARLAGG-EQPTIPPAECAHGALIRHLTT 176 >gi|297566733|ref|YP_003685705.1| gid protein [Meiothermus silvanus DSM 9946] gi|296851182|gb|ADH64197.1| gid protein [Meiothermus silvanus DSM 9946] Length = 436 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 46/164 (28%), Positives = 79/164 (48%), Gaps = 16/164 (9%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q +++IPGLE I+R G Y+N P+ L PT++ ++ LF+ G Sbjct: 266 GFQTGLKWGDQKLLVQSIPGLEHAEIVRYGVMHRNTYLNAPRLLLPTMQFREYPHLFVCG 325 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 + G GY ++AA G +AG+N+AR + ++ T S +G ++ L Sbjct: 326 VLAGVEGYLDSAATGWLAGVNAARLALGMEPTLPPET-SMLGGLVRYLA----------- 373 Query: 428 TSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEY 471 T+ + +P NA+ L P G E+R + + + +Q + Sbjct: 374 TANPQ---GFQPMNANWGLVPPIKGKGSKTEKRVQMYHRGLQAF 414 >gi|225868565|ref|YP_002744513.1| protein Gid homolog [Streptococcus equi subsp. zooepidemicus] gi|259547965|sp|C0MFF9|TRMFO_STRS7 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|225701841|emb|CAW99295.1| protein Gid homolog [Streptococcus equi subsp. zooepidemicus] Length = 444 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/99 (37%), Positives = 52/99 (52%), Gaps = 1/99 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ PK L +++ LF AG Sbjct: 288 GFQTHLKWGEQKRVFQMIPGLEHAEFVRYGVMHRNSYMDSPKLLTQGFQSRANHRLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDS 406 Q+ G GY E+AA GLVAGIN+AR + + + F T + Sbjct: 348 QMTGVEGYVESAASGLVAGINAARLFKEEEPLVFPNTTA 386 >gi|225870565|ref|YP_002746512.1| protein Gid homolog [Streptococcus equi subsp. equi 4047] gi|254789177|sp|C0M6C7|TRMFO_STRE4 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|225699969|emb|CAW93937.1| protein Gid homolog [Streptococcus equi subsp. equi 4047] Length = 444 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/99 (37%), Positives = 52/99 (52%), Gaps = 1/99 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ PK L +++ LF AG Sbjct: 288 GFQTHLKWGEQKRVFQMIPGLEHAEFVRYGVMHRNSYMDSPKLLTQGFQSRANHRLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDS 406 Q+ G GY E+AA GLVAGIN+AR + + + F T + Sbjct: 348 QMTGVEGYVESAASGLVAGINAARLFKEEEPLVFPNTTA 386 >gi|315284186|ref|ZP_07872090.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [Listeria marthii FSL S4-120] gi|313612170|gb|EFR86408.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [Listeria marthii FSL S4-120] Length = 96 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 57/87 (65%) Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 + E+++I+ Y Y + ++ +++K E + IP++ DY ++ L+ E EKL ++P + Sbjct: 5 IAEQVEIQVKYEGYIQKSNLQVEKMKRMEDKKIPENIDYDAISGLATEALEKLKKIEPLS 64 Query: 592 LLQASKIEGMTPAALNLLLIYIKKNTV 618 + QAS+I G+ PA +++LL+YI++ + Sbjct: 65 IAQASRISGVNPADISILLVYIEQGKI 91 >gi|157363547|ref|YP_001470314.1| gid protein [Thermotoga lettingae TMO] gi|205830344|sp|A8F516|TRMFO_THELT RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|157314151|gb|ABV33250.1| gid protein [Thermotoga lettingae TMO] Length = 441 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 42/111 (37%), Positives = 54/111 (48%), Gaps = 5/111 (4%) Query: 288 RNGHQIF----LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEY 343 R G Q F L E L+ + G T L Q + IR IPGLEK I+R G + Sbjct: 252 RTGKQPFAVVQLRKENLDETLYNIVGFQTRLKWGEQRKIIRLIPGLEKAEIVRYGVMHKN 311 Query: 344 DYINPKELF-PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKS 393 YIN +++ P + K +F AGQI G GY E+ A GL +N R S Sbjct: 312 IYINSRKVLDPFMRLKNDRKIFFAGQITGVEGYLESVASGLYVALNVYRIS 362 >gi|313901011|ref|ZP_07834499.1| tRNA:m(5)U-54 methyltransferase [Clostridium sp. HGF2] gi|312953969|gb|EFR35649.1| tRNA:m(5)U-54 methyltransferase [Clostridium sp. HGF2] Length = 432 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/83 (43%), Positives = 47/83 (56%), Gaps = 1/83 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE V+I+R G Y+ PK L PT + + LF AG Sbjct: 277 GFQTHLKWGEQKRLLSMIPGLENVSIVRYGVMHRNSYLCAPKVLRPTYQHVQRDDLFFAG 336 Query: 368 QINGTTGYEEAAAQGLVAGINSA 390 Q+ G GY E+AA GL+AG+N A Sbjct: 337 QLCGVEGYVESAASGLLAGMNMA 359 >gi|322411755|gb|EFY02663.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 448 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/99 (37%), Positives = 51/99 (51%), Gaps = 1/99 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T ++ LF AG Sbjct: 291 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLTETFQSCSNPNLFFAG 350 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDS 406 Q+ G GY E+AA GLVAGIN+AR + + F +T + Sbjct: 351 QMTGVEGYVESAASGLVAGINAARLFKGEEAMVFPQTTA 389 >gi|66576110|gb|AAY51662.1| mitochondrial MTO1 [Eulemur coronatus] Length = 51 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 25/51 (49%), Positives = 37/51 (72%) Query: 317 EIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAG 367 E+Q + I I GLEK +I PGY ++YDY++P+++ P+LET + LFLAG Sbjct: 1 ELQEKMITCIRGLEKAKMIHPGYGVQYDYLDPRQIAPSLETHLVQRLFLAG 51 >gi|33865433|ref|NP_896992.1| tRNA (uracil-5-)-methyltransferase Gid [Synechococcus sp. WH 8102] gi|81574825|sp|Q7U7T2|TRMFO_SYNPX RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|33632602|emb|CAE07414.1| probable glucose inhibited division protein [Synechococcus sp. WH 8102] Length = 461 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 45/139 (32%), Positives = 67/139 (48%), Gaps = 2/139 (1%) Query: 267 IKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTI 326 I + PR+ + D+ VR +R + L E + + G T L Q + ++ I Sbjct: 258 IGLWDPRWG-DVNDRDVRRAKRAYAVVQLRQEDKDGRLWNLVGFQTNLKWGEQKRVLQMI 316 Query: 327 PGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVA 385 PGL + +R G ++ +P+ L PTL+ + S L AGQI GT GY A A G +A Sbjct: 317 PGLAEAEFVRFGVMHRNTFLESPQLLEPTLQFRSRSSLLAAGQITGTEGYAAAVAGGWLA 376 Query: 386 GINSARKSNKLDCICFSRT 404 G N+AR + L I T Sbjct: 377 GTNAARLARGLAPIDLPAT 395 >gi|329769609|ref|ZP_08261013.1| methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase trmFO [Gemella sanguinis M325] gi|328838364|gb|EGF87973.1| methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase trmFO [Gemella sanguinis M325] Length = 434 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 44/114 (38%), Positives = 60/114 (52%), Gaps = 6/114 (5%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + I IPGLE NI+R G Y+N P+ L T + K+ ++ AG Sbjct: 280 GFQTHLKWGEQKRIINLIPGLENANIVRYGVMHRNTYLNSPQLLEKTYKLKEEKNIYFAG 339 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM---IDDLTSK 418 Q+ G GY E+AA G+VA +N+ N+ D T++ IG M I D TSK Sbjct: 340 QMTGVEGYVESAASGIVAALNAL--YNQEDKQIIFPTETMIGAMANYIVDNTSK 391 Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 55/130 (42%), Gaps = 25/130 (19%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGG----LG 54 VIVIG G AG EAA AK G + L HKT + C+ ++ Sbjct: 5 VIVIGAGLAGSEAAWQLAKRGVNVDLYEMRPKKMTPAHKTQNFAELVCSNSLRANNITNA 64 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L E+ LD L+ + ADA + P+ G DR+ + + I + Sbjct: 65 VGLLKEEMRRLDSLIIKCADATQV----------PS--GGALAVDRDKFSEMITETIKNH 112 Query: 115 ENLDVIQGEV 124 N++VI+ E+ Sbjct: 113 PNINVIEEEI 122 >gi|313621867|gb|EFR92548.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [Listeria innocua FSL J1-023] Length = 101 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 57/87 (65%) Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 + E+++I+ Y Y + ++ +++K E + IP++ DY ++ L+ E EKL ++P + Sbjct: 10 IAEQVEIQIKYEGYIQKSNLQVEKMKRMEDKKIPENIDYDAISGLATEALEKLKKIEPLS 69 Query: 592 LLQASKIEGMTPAALNLLLIYIKKNTV 618 + QAS+I G+ PA +++LL+YI++ + Sbjct: 70 IAQASRISGVNPADISILLVYIEQGKI 96 >gi|313616450|gb|EFR89360.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [Listeria innocua FSL S4-378] Length = 103 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 57/87 (65%) Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 + E+++I+ Y Y + ++ +++K E + IP++ DY ++ L+ E EKL ++P + Sbjct: 12 IAEQVEIQIKYEGYIQKSNLQVEKMKRMEDKKIPENIDYDAISGLATEALEKLKKIEPLS 71 Query: 592 LLQASKIEGMTPAALNLLLIYIKKNTV 618 + QAS+I G+ PA +++LL+YI++ + Sbjct: 72 IAQASRISGVNPADISILLVYIEQGKI 98 >gi|329727205|gb|EGG63661.1| putative tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus subsp. aureus 21172] Length = 210 Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 49/141 (34%), Positives = 65/141 (46%), Gaps = 15/141 (10%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + I+ IPGLE V+I+R G +IN P L E + AG Sbjct: 53 GFQTHLKWGAQKEVIKLIPGLENVDIVRYGVMHRNTFINSPDVLNEKYELISQPNIQFAG 112 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 Q+ G GY E+AA GLVAGIN A K + F R ++ IG M + Sbjct: 113 QMTGVEGYVESAASGLVAGINLAHKILGKGEVVFPR-ETMIGSMA-------------YY 158 Query: 428 TSRAEYRISLRPDNADNRLTP 448 S A+ + +P NA+ L P Sbjct: 159 ISHAKNNKNFQPMNANFGLLP 179 >gi|307704915|ref|ZP_07641806.1| tRNA:m(5)U-54 methyltransferase [Streptococcus mitis SK597] gi|307621529|gb|EFO00575.1| tRNA:m(5)U-54 methyltransferase [Streptococcus mitis SK597] Length = 444 Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 36/84 (42%), Positives = 46/84 (54%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +KK LF AG Sbjct: 288 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTYRSKKQPNLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA G+VAGIN+AR Sbjct: 348 QMTGVEGYVESAASGVVAGINAAR 371 >gi|293400523|ref|ZP_06644668.1| tRNA:M(5)U-54 methyltransferase [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305549|gb|EFE46793.1| tRNA:M(5)U-54 methyltransferase [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 430 Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 41/109 (37%), Positives = 55/109 (50%), Gaps = 2/109 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE V+I+R G Y+ PK L PT + LF AG Sbjct: 275 GFQTHLKWGEQKRILSMIPGLEHVSIVRYGVMHRNSYLCAPKVLRPTYQHITRDDLFFAG 334 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 Q+ G GY E+AA GL+AG+N A + T IG M++ +T Sbjct: 335 QLTGVEGYVESAASGLLAGLNMANLIRGKAVVTLPST-CVIGSMVNYIT 382 >gi|50365058|ref|YP_053483.1| tRNA (uracil-5-)-methyltransferase Gid [Mesoplasma florum L1] gi|81827314|sp|Q6F1M4|TMFO1_MESFL RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO 1; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase 1; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase 1 gi|50363614|gb|AAT75599.1| glucose inhibited division protein C [Mesoplasma florum L1] Length = 442 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 1/81 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q + ++T+PGLE +NI+R G + YIN PK L +L+ K+ +F AG Sbjct: 279 GFQTNIKWPEQKRILQTLPGLENLNIVRFGVMHKNYYINSPKLLNRSLQVKRNKNIFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGIN 388 QI G GY E+A+ G++ IN Sbjct: 339 QITGVEGYIESASSGILTAIN 359 >gi|4140576|gb|AAD04123.1| glucose-inhibited division protein A [Chlamydia trachomatis] Length = 42 Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats. Identities = 25/39 (64%), Positives = 32/39 (82%) Query: 40 TIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGI 78 TI +SCNPA+GG+GKGH+VREIDAL G+M + D +GI Sbjct: 4 TIAKLSCNPAVGGIGKGHIVREIDALGGIMAEITDLSGI 42 >gi|319937630|ref|ZP_08012034.1| tRNA (Uracil-5-)-methyltransferase gid [Coprobacillus sp. 29_1] gi|319807272|gb|EFW03884.1| tRNA (Uracil-5-)-methyltransferase gid [Coprobacillus sp. 29_1] Length = 432 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 50/96 (52%), Gaps = 1/96 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + I IPGLE I+R G +I +P+ L PT + + LF AG Sbjct: 275 GFQTHLKWPEQDRIIHMIPGLENAKIVRYGVMHRNCFICSPRYLKPTYQFIEREDLFFAG 334 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSR 403 Q+ G GY E+A G+VAG+N R + + + F R Sbjct: 335 QMTGVEGYVESAQSGMVAGMNMVRYLHNQELLVFPR 370 >gi|66576092|gb|AAY51653.1| mitochondrial MTO1 [Macaca fascicularis] Length = 51 Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats. Identities = 24/51 (47%), Positives = 37/51 (72%) Query: 317 EIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAG 367 E+Q + I I GLEK +I+PGY ++YDY++P+++ P+LET + LF AG Sbjct: 1 ELQEKMITCIRGLEKAKVIQPGYGVQYDYLDPRQITPSLETHMVQRLFFAG 51 >gi|304404237|ref|ZP_07385899.1| gid protein [Paenibacillus curdlanolyticus YK9] gi|304347215|gb|EFM13047.1| gid protein [Paenibacillus curdlanolyticus YK9] Length = 439 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE +R G +IN P+ L T + K LF AG Sbjct: 281 GFQTHLKWGEQKRVFSLIPGLENAEFVRFGVMHRNTFINSPRLLRSTYQFKARETLFFAG 340 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+AA GL+AG+N+ R + L+ + D+ +G M +T+ Sbjct: 341 QMTGVEGYVESAASGLIAGLNAGRLARGLEPVELP-ADTTLGSMAQYITT 389 >gi|66576112|gb|AAY51663.1| mitochondrial MTO1 [Nycticebus coucang] Length = 51 Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats. Identities = 25/51 (49%), Positives = 37/51 (72%) Query: 317 EIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAG 367 E+Q + I I GLEK +I+PGY ++YDY++P+ + P+LET + LFLAG Sbjct: 1 ELQEKMITCIRGLEKAKMIQPGYGVQYDYLDPRHITPSLETHLVQRLFLAG 51 >gi|309805935|ref|ZP_07699965.1| tRNA (uracil-5-)-methyltransferase Gid [Lactobacillus iners LactinV 03V1-b] gi|308167674|gb|EFO69823.1| tRNA (uracil-5-)-methyltransferase Gid [Lactobacillus iners LactinV 03V1-b] Length = 223 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 42/110 (38%), Positives = 57/110 (51%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGL +R G YI+ P+ L T ETK LF AG Sbjct: 65 GFQTHLKFGEQKRVFSLIPGLANAVFVRYGKMHRNTYISSPEVLNSTYETKLCENLFFAG 124 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+A GLVAGIN++ ++ I F + ++ IG M + +TS Sbjct: 125 QMTGVEGYVESAGSGLVAGINASLRAIGESPIVFPK-NTAIGSMANYITS 173 >gi|322420081|ref|YP_004199304.1| gid protein [Geobacter sp. M18] gi|320126468|gb|ADW14028.1| gid protein [Geobacter sp. M18] Length = 436 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 38/110 (34%), Positives = 56/110 (50%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE+ +R G +IN P+ L T + K + AG Sbjct: 279 GFQTKLTWPEQKRIFRMIPGLEEAQFLRLGSMHRNTFINAPQLLLATCQLKSDPRILFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 QI G GY E+A+ G VAG+N+AR + + I ++ IG + +T+ Sbjct: 339 QITGVEGYVESASSGFVAGVNAARLAKGAELIV-PPAETAIGALARHITN 387 Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust. Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 11/124 (8%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALD 66 + VIGGG AGCEAA AAK G L K P + L + +R D+L+ Sbjct: 4 QITVIGGGLAGCEAAWQAAKRGVKVRLYEMKPKRYSEAHHLPGLSELVCSNSLRG-DSLE 62 Query: 67 GLMGRVADAAGIQFRVLN---VKKGPAVRGPRTQA---DRELYRLAMQREILSQENLDVI 120 +G + + + R LN ++ A + P A DREL+ + + I N++V+ Sbjct: 63 NAVGLLKE----ELRRLNSLFLEGAEATKVPAGGALAVDRELFSEYITKRIEEHPNIEVL 118 Query: 121 QGEV 124 E+ Sbjct: 119 HEEI 122 >gi|66576114|gb|AAY51664.1| mitochondrial MTO1 [Galago moholi] Length = 51 Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats. Identities = 25/51 (49%), Positives = 37/51 (72%) Query: 317 EIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAG 367 E+Q + I I GLEK +I+PGY ++YDY++P+ + P+LET + LFLAG Sbjct: 1 ELQEKMITCIRGLEKAKMIQPGYGVQYDYLDPRHISPSLETHLVQRLFLAG 51 >gi|313892679|ref|ZP_07826262.1| tRNA:m(5)U-54 methyltransferase [Veillonella sp. oral taxon 158 str. F0412] gi|313442770|gb|EFR61179.1| tRNA:m(5)U-54 methyltransferase [Veillonella sp. oral taxon 158 str. F0412] Length = 438 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 105/419 (25%), Positives = 150/419 (35%), Gaps = 64/419 (15%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAI--GGL-- 53 +VIVIG G AG EAA A G L H+T + C+ ++ G + Sbjct: 5 NVIVIGAGLAGSEAAWQLANRGIHVDLYEMRPLKSSPAHQTDQFAELVCSNSLRAGNIEN 64 Query: 54 GKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILS 113 G L E+ L L+ ADA + PA G DR L+ + +++ Sbjct: 65 AVGLLKEEMRRLGSLIMECADATAV----------PA--GGALAVDRHLFSEMVTKKVKG 112 Query: 114 QENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGR 173 N+ V EV E TV+ +G + K+K G Sbjct: 113 HPNITVHNEEVTEIPAE-----------------GTVIFASGPLTSEALG-DKIKALTGE 154 Query: 174 MGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI 233 G F +D + T D K + +K AD P + K+ Sbjct: 155 TG----------FYFYD-AAAPIVTAESLNYD-KVFAASRYDKGDADYLNCPMTEEEYKV 202 Query: 234 TNRQIECG--ITRTNLETHRIIMENIKHSAIYSG---DIKSYGPRYCPSIEDKIVRFGER 288 +++ + + E I E I + D YGP + DK R E Sbjct: 203 FWQELTTAEAVQPKDFEK-EIYFEGCMPVEIMASRGEDTLRYGPLKPVGLVDK--RTNEE 259 Query: 289 NGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINP 348 + + L E + G T L Q + IPGLE IR G YIN Sbjct: 260 SYAVVQLRKENKEGTMFNLVGFQTHLKWGEQKRVFGMIPGLENAEFIRYGVMHRNTYINS 319 Query: 349 KELF-PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDS 406 EL + KK LF AGQ+ G GY E+AA GL+ G+ R + I F +T + Sbjct: 320 PELLNHAFQLKKEPRLFFAGQMTGVEGYLESAASGLMVGLQVERYLEERSFIDFPKTTA 378 >gi|303240292|ref|ZP_07326811.1| gid protein [Acetivibrio cellulolyticus CD2] gi|302592202|gb|EFL61931.1| gid protein [Acetivibrio cellulolyticus CD2] Length = 442 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 39/113 (34%), Positives = 58/113 (51%), Gaps = 2/113 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE +R G +IN PK L + +K L+ AG Sbjct: 279 GFQTRLKWPEQKRVFGLIPGLENAEFVRYGVMHRNTFINSPKVLEASYRMRKYQNLYFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 Q+ G GY E+A+ GLVAGIN+A + + F R+ + IG + + ++ + V Sbjct: 339 QMTGVEGYVESASSGLVAGINAAMNFLGKEDVLFPRSTA-IGALSNYISDQNV 390 >gi|159903126|ref|YP_001550470.1| tRNA (uracil-5-)-methyltransferase Gid [Prochlorococcus marinus str. MIT 9211] gi|205830319|sp|A9BEK6|TRMFO_PROM4 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|159888302|gb|ABX08516.1| NAD binding site:Glucose inhibited division protein A family [Prochlorococcus marinus str. MIT 9211] Length = 474 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 103/437 (23%), Positives = 165/437 (37%), Gaps = 68/437 (15%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGG 52 +N+S + ++G G AG EAA A+ G L H T+ + C+ + G Sbjct: 1 MNQSDSITIVGAGLAGSEAAWQVARAGIHVELYEMRPLKASPAHHTADFAELVCSNSFGA 60 Query: 53 L----GKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQ 108 L G L E+ L+ + AD + PA G DR + + Sbjct: 61 LSADRAAGLLQEELRYLNSFVINSADKHSV----------PA--GGALAVDRSRFSADIT 108 Query: 109 REILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLK 168 +I S + V + E+ +E+ I ++ LT+ + + ++ Sbjct: 109 EKITSHPLITVKRVELQKLPSEEQITV-----------IASGPLTSKNLAEDLKNFTGIQ 157 Query: 169 IPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSF 228 SP + + ++F F R G D I +KQ+ SF Sbjct: 158 ECHFFDAASPIIAGESIDLRFAFRGSRYDKG-----DADYINCPMNKKQY-------LSF 205 Query: 229 MTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGER 288 + I Q E + I+ A D YGP + D R+G+ Sbjct: 206 RDELIKAEQAELKDFEKSSSNFFEGCLPIEELARRGEDTMRYGPLKPIGLWDP--RWGDL 263 Query: 289 NGHQIFLEP-------------EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNII 335 N +I E EG ++V G T L Q + +R IPGL+ + + Sbjct: 264 NNREIRREKRAYAVVQLRQEDREGKLWNLV---GFQTNLKWGEQKRVLRMIPGLQNADFV 320 Query: 336 RPGYAIEYDYI-NPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSN 394 R G ++ +PK L +L+ +K + L AGQI GT GY A A G +AG N+A + Sbjct: 321 RFGVMHRNTFLESPKLLNASLQFRKRAKLLAAGQITGTEGYVAAVAGGWLAGTNAALLAM 380 Query: 395 KLDCICFSRTDSYIGVM 411 I F R ++ IG + Sbjct: 381 GHKPIIFPR-NTMIGAL 396 >gi|66576088|gb|AAY51651.1| mitochondrial MTO1 [Macaca nemestrina] gi|66576090|gb|AAY51652.1| mitochondrial MTO1 [Macaca sylvanus] gi|66576094|gb|AAY51654.1| mitochondrial MTO1 [Macaca mulatta] gi|66576102|gb|AAY51658.1| mitochondrial MTO1 [Callithrix jacchus] gi|66576104|gb|AAY51659.1| mitochondrial MTO1 [Saguinus fuscicollis] Length = 51 Score = 61.6 bits (148), Expect = 4e-07, Method: Composition-based stats. Identities = 24/51 (47%), Positives = 37/51 (72%) Query: 317 EIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAG 367 E+Q + I I GLEK +I+PGY ++YDY++P+++ P+LET + LF AG Sbjct: 1 ELQEKMITCIRGLEKAKVIQPGYGVQYDYLDPRQITPSLETHLVQRLFFAG 51 >gi|257430599|ref|ZP_05606981.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus subsp. aureus 68-397] gi|257278727|gb|EEV09346.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus subsp. aureus 68-397] Length = 289 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 49/141 (34%), Positives = 65/141 (46%), Gaps = 15/141 (10%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + I+ IPGLE V+I+R G +IN P L E + AG Sbjct: 132 GFQTHLKWGAQKEVIKLIPGLENVDIVRYGVMHRNTFINSPDVLNEKYELISQPNIQFAG 191 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 Q+ G GY E+AA GLVAGIN A K + F R ++ IG M + Sbjct: 192 QMTGVEGYVESAASGLVAGINLAHKILGKGEVVFPR-ETMIGSMA-------------YY 237 Query: 428 TSRAEYRISLRPDNADNRLTP 448 S A+ + +P NA+ L P Sbjct: 238 ISHAKNNKNFQPMNANFGLLP 258 >gi|325290383|ref|YP_004266564.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO [Syntrophobotulus glycolicus DSM 8271] gi|324965784|gb|ADY56563.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO [Syntrophobotulus glycolicus DSM 8271] Length = 444 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 43/119 (36%), Positives = 55/119 (46%), Gaps = 5/119 (4%) Query: 288 RNGHQIF----LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEY 343 R G Q F L E L ++ G T L Q + R IPGLE R G Sbjct: 253 RTGKQPFAVVQLRKENLEGSLLNLVGFQTHLKWGEQKRVFRMIPGLENAEFARYGVMHRN 312 Query: 344 DYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICF 401 ++N PK L + +F AGQI G GY E+AA GL+AGIN+ R L+ + F Sbjct: 313 TFLNSPKVLQADFRLRNKPEIFFAGQITGVEGYVESAASGLLAGINAFRFLRGLETLVF 371 >gi|313889372|ref|ZP_07823020.1| tRNA:m(5)U-54 methyltransferase [Streptococcus pseudoporcinus SPIN 20026] gi|313122204|gb|EFR45295.1| tRNA:m(5)U-54 methyltransferase [Streptococcus pseudoporcinus SPIN 20026] Length = 444 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 36/99 (36%), Positives = 50/99 (50%), Gaps = 1/99 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G Y++ P L T +++ LF AG Sbjct: 288 GFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLKQTFQSRANENLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDS 406 Q+ G GY E+AA GLVAGIN+ +K + F T + Sbjct: 348 QMTGVEGYVESAASGLVAGINAVKKFKGQAEVIFPETTA 386 >gi|78222113|ref|YP_383860.1| tRNA (uracil-5-)-methyltransferase Gid [Geobacter metallireducens GS-15] gi|123572455|sp|Q39X89|TRMFO_GEOMG RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|78193368|gb|ABB31135.1| Gid protein [Geobacter metallireducens GS-15] Length = 434 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 11/94 (11%) Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLET 357 G T + YP Q + R IPGLE +R G +IN P L PT + Sbjct: 279 GFQTKLTYPE----------QRRIFRMIPGLENAEFVRLGSMHRNTFINAPALLAPTFQL 328 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSAR 391 K + + AGQI G GY E+A G +AG+N+AR Sbjct: 329 KGDARILFAGQITGVEGYVESAGSGFLAGVNAAR 362 Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust. Identities = 38/140 (27%), Positives = 59/140 (42%), Gaps = 25/140 (17%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTAL---------ITHKTSTIGSMSCNPAIGGL----G 54 + +IGGG AGCEA AA+ G L H + + + C+ ++ G Sbjct: 5 ITIIGGGLAGCEAVWQAAERGVRVTLHEMKPHAFSPAHHLAGLAELVCSNSLRGESLENA 64 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L E+ L+ ADA + PA G DREL+ + I + Sbjct: 65 VGLLKEELRRAGSLIMAAADATRV----------PA--GGALAVDRELFSAFVTERIENH 112 Query: 115 ENLDVIQGEVAGFNTEKNII 134 +D+++GEVA +E +I Sbjct: 113 PLVDLMRGEVADIPSEDIVI 132 >gi|257427966|ref|ZP_05604364.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus subsp. aureus 65-1322] gi|257274807|gb|EEV06294.1| tRNA (uracil-5-)-methyltransferase Gid [Staphylococcus aureus subsp. aureus 65-1322] Length = 351 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 49/141 (34%), Positives = 65/141 (46%), Gaps = 15/141 (10%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + I+ IPGLE V+I+R G +IN P L E + AG Sbjct: 194 GFQTHLKWGAQKEVIKLIPGLENVDIVRYGVMHRNTFINSPDVLNEKYELISQPNIQFAG 253 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 Q+ G GY E+AA GLVAGIN A K + F R ++ IG M + Sbjct: 254 QMTGVEGYVESAASGLVAGINLAHKILGKGEVVFPR-ETMIGSMA-------------YY 299 Query: 428 TSRAEYRISLRPDNADNRLTP 448 S A+ + +P NA+ L P Sbjct: 300 ISHAKNNKNFQPMNANFGLLP 320 >gi|312873931|ref|ZP_07733967.1| tRNA:m(5)U-54 methyltransferase [Lactobacillus iners LEAF 2052A-d] gi|311090480|gb|EFQ48888.1| tRNA:m(5)U-54 methyltransferase [Lactobacillus iners LEAF 2052A-d] Length = 437 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 42/110 (38%), Positives = 57/110 (51%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGL +R G YI+ P+ L T ETK LF AG Sbjct: 279 GFQTHLKFGEQKRVFSLIPGLANAVFVRYGKMHRNTYISSPEVLNSTYETKLCENLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+A GLVAGIN++ ++ I F + ++ IG M + +TS Sbjct: 339 QMTGVEGYVESAGSGLVAGINASLRAIGESPIVFPK-NTAIGSMANYITS 387 >gi|241889922|ref|ZP_04777220.1| tRNA:M(5)U-54 methyltransferase [Gemella haemolysans ATCC 10379] gi|241863544|gb|EER67928.1| tRNA:M(5)U-54 methyltransferase [Gemella haemolysans ATCC 10379] Length = 434 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 6/114 (5%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + I IPGLE NI+R G Y+N P+ L T K+ ++ AG Sbjct: 280 GFQTHLKWGEQKRIINMIPGLENANIVRYGVMHRNTYLNSPQLLEKTYRLKEEKNIYFAG 339 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM---IDDLTSK 418 Q+ G GY E+AA G+VA +N+ + + + T++ IG M I D TSK Sbjct: 340 QMTGVEGYVESAASGIVAALNALYNTEDKEVVF--PTETMIGAMANYIVDNTSK 391 Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust. Identities = 38/130 (29%), Positives = 54/130 (41%), Gaps = 25/130 (19%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGG----LG 54 VIVIG G AG EAA AK G L HKT G + C+ ++ Sbjct: 5 VIVIGAGLAGSEAAWQLAKRGVKVDLYEMRPKKMTPAHKTQNFGELVCSNSLRANNVTNA 64 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L E+ LD ++ + ADA + PA G DR+ + + I + Sbjct: 65 VGLLKEEMRMLDSIIIKCADATQV----------PA--GGALAVDRDKFSEMITETIKNH 112 Query: 115 ENLDVIQGEV 124 N++VI E+ Sbjct: 113 PNINVIGEEL 122 >gi|312871380|ref|ZP_07731475.1| tRNA:m(5)U-54 methyltransferase [Lactobacillus iners LEAF 3008A-a] gi|311093033|gb|EFQ51382.1| tRNA:m(5)U-54 methyltransferase [Lactobacillus iners LEAF 3008A-a] Length = 437 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 42/110 (38%), Positives = 57/110 (51%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGL +R G YI+ P+ L T ETK LF AG Sbjct: 279 GFQTHLKFGEQKRVFSLIPGLANAVFVRYGKMHRNTYISSPEVLNSTYETKLCKNLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+A GLVAGIN++ ++ I F + ++ IG M + +TS Sbjct: 339 QMTGVEGYVESAGSGLVAGINASLRAIGESPIVFPK-NTAIGSMANYITS 387 >gi|309804175|ref|ZP_07698253.1| tRNA:m(5)U-54 methyltransferase [Lactobacillus iners LactinV 11V1-d] gi|312875488|ref|ZP_07735491.1| tRNA:m(5)U-54 methyltransferase [Lactobacillus iners LEAF 2053A-b] gi|315653523|ref|ZP_07906444.1| tRNA:M(5)U-54 methyltransferase [Lactobacillus iners ATCC 55195] gi|308163758|gb|EFO66027.1| tRNA:m(5)U-54 methyltransferase [Lactobacillus iners LactinV 11V1-d] gi|311088999|gb|EFQ47440.1| tRNA:m(5)U-54 methyltransferase [Lactobacillus iners LEAF 2053A-b] gi|315489214|gb|EFU78855.1| tRNA:M(5)U-54 methyltransferase [Lactobacillus iners ATCC 55195] Length = 437 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 42/110 (38%), Positives = 57/110 (51%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGL +R G YI+ P+ L T ETK LF AG Sbjct: 279 GFQTHLKFGEQKRVFSLIPGLANAVFVRYGKMHRNTYISSPEVLNSTYETKLCKNLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+A GLVAGIN++ ++ I F + ++ IG M + +TS Sbjct: 339 QMTGVEGYVESAGSGLVAGINASLRAIGESPIVFPK-NTAIGSMANYITS 387 >gi|329921312|ref|ZP_08277750.1| tRNA:m(5)U-54 methyltransferase [Lactobacillus iners SPIN 1401G] gi|328934604|gb|EGG31108.1| tRNA:m(5)U-54 methyltransferase [Lactobacillus iners SPIN 1401G] Length = 437 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 42/110 (38%), Positives = 57/110 (51%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGL +R G YI+ P+ L T ETK LF AG Sbjct: 279 GFQTHLKFGEQKRVFSLIPGLANAVFVRYGKMHRNTYISSPEVLNSTYETKLCENLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+A GLVAGIN++ ++ I F + ++ IG M + +TS Sbjct: 339 QMTGVEGYVESAGSGLVAGINASLRAIGESPIVFPK-NTAIGSMANYITS 387 >gi|320527483|ref|ZP_08028664.1| tRNA:M(5)U-54 methyltransferase [Solobacterium moorei F0204] gi|320132196|gb|EFW24745.1| tRNA:M(5)U-54 methyltransferase [Solobacterium moorei F0204] Length = 431 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 37/84 (44%), Positives = 46/84 (54%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + I+ IPGLE I+R G YI +P L T + K LF AG Sbjct: 275 GFQTHLKWGEQKRIIQMIPGLENAEIVRYGVMHRNTYICSPIYLRETYQFKDRDDLFFAG 334 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA G++AGIN AR Sbjct: 335 QMTGVEGYVESAASGMLAGINMAR 358 >gi|312872381|ref|ZP_07732451.1| tRNA:m(5)U-54 methyltransferase [Lactobacillus iners LEAF 2062A-h1] gi|311092204|gb|EFQ50578.1| tRNA:m(5)U-54 methyltransferase [Lactobacillus iners LEAF 2062A-h1] Length = 437 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 42/110 (38%), Positives = 57/110 (51%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGL +R G YI+ P+ L T ETK LF AG Sbjct: 279 GFQTHLKFGEQKRVFSLIPGLANAVFVRYGKMHRNTYISSPEVLNSTYETKLCENLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+A GLVAGIN++ ++ I F + ++ IG M + +TS Sbjct: 339 QMTGVEGYVESAGSGLVAGINASLRAIGESPIVFPK-NTAIGSMANYITS 387 >gi|325912870|ref|ZP_08175248.1| tRNA:m(5)U-54 methyltransferase [Lactobacillus iners UPII 60-B] gi|325477863|gb|EGC80997.1| tRNA:m(5)U-54 methyltransferase [Lactobacillus iners UPII 60-B] Length = 437 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 42/110 (38%), Positives = 57/110 (51%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGL +R G YI+ P+ L T ETK LF AG Sbjct: 279 GFQTHLKFGEQKRVFSLIPGLANAVFVRYGKMHRNTYISSPEVLNSTYETKLCKNLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+A GLVAGIN++ ++ I F + ++ IG M + +TS Sbjct: 339 QMTGVEGYVESAGSGLVAGINASLRAIGESPIVFPK-NTAIGSMANYITS 387 >gi|325912026|ref|ZP_08174428.1| tRNA:m(5)U-54 methyltransferase [Lactobacillus iners UPII 143-D] gi|325476211|gb|EGC79375.1| tRNA:m(5)U-54 methyltransferase [Lactobacillus iners UPII 143-D] Length = 437 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 42/110 (38%), Positives = 57/110 (51%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGL +R G YI+ P+ L T ETK LF AG Sbjct: 279 GFQTHLKFGEQKRVFSLIPGLANAVFVRYGKMHRNTYISSPEVLNSTYETKLCENLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+A GLVAGIN++ ++ I F + ++ IG M + +TS Sbjct: 339 QMTGVEGYVESAGSGLVAGINASLRAIGESPIVFPK-NTAIGSMANYITS 387 >gi|259500642|ref|ZP_05743544.1| glucose-inhibited division protein [Lactobacillus iners DSM 13335] gi|302191331|ref|ZP_07267585.1| tRNA (uracil-5-)-methyltransferase Gid [Lactobacillus iners AB-1] gi|259168026|gb|EEW52521.1| glucose-inhibited division protein [Lactobacillus iners DSM 13335] Length = 437 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 42/110 (38%), Positives = 57/110 (51%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGL +R G YI+ P+ L T ETK LF AG Sbjct: 279 GFQTHLKFGEQKRVFSLIPGLANAVFVRYGKMHRNTYISSPEVLNSTYETKLCKNLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+A GLVAGIN++ ++ I F + ++ IG M + +TS Sbjct: 339 QMTGVEGYVESAGSGLVAGINASLRAIGESPIVFPK-NTAIGSMANYITS 387 >gi|309809274|ref|ZP_07703143.1| tRNA:m(5)U-54 methyltransferase [Lactobacillus iners SPIN 2503V10-D] gi|308170387|gb|EFO72411.1| tRNA:m(5)U-54 methyltransferase [Lactobacillus iners SPIN 2503V10-D] Length = 437 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 42/110 (38%), Positives = 57/110 (51%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGL +R G YI+ P+ L T ETK LF AG Sbjct: 279 GFQTHLKFGEQKRVFSLIPGLANAVFVRYGKMHRNTYISSPEVLNSTYETKLCKNLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+A GLVAGIN++ ++ I F + ++ IG M + +TS Sbjct: 339 QMTGVEGYVESAGSGLVAGINASLRAIGESPIVFPK-NTAIGSMANYITS 387 >gi|318040166|ref|ZP_07972122.1| tRNA (uracil-5-)-methyltransferase Gid [Synechococcus sp. CB0101] Length = 463 Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 43/126 (34%), Positives = 61/126 (48%), Gaps = 2/126 (1%) Query: 267 IKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTI 326 I + PR+ + D+ VR R + L E + + G T L Q + +R I Sbjct: 257 IGLWDPRWG-DVNDRDVRRANRAYAVVQLRQEDKDGRLWNLVGFQTNLKWGEQKRVLRMI 315 Query: 327 PGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVA 385 PGLE +R G ++ P+ L PTL+ ++ L AGQI GT GY A A G +A Sbjct: 316 PGLENAEFVRFGVMHRNTFLEAPQLLDPTLQFRQRPTLLAAGQITGTEGYAAAVAGGWLA 375 Query: 386 GINSAR 391 G N+AR Sbjct: 376 GTNAAR 381 >gi|225861168|ref|YP_002742677.1| tRNA (uracil-5-)-methyltransferase Gid [Streptococcus pneumoniae Taiwan19F-14] gi|254789183|sp|C1CRV5|TRMFO_STRZT RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|225726600|gb|ACO22451.1| tRNA:M(5)U-54 methyltransferase [Streptococcus pneumoniae Taiwan19F-14] gi|327389220|gb|EGE87565.1| tRNA:m(5)U-54 methyltransferase [Streptococcus pneumoniae GA04375] Length = 444 Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 36/84 (42%), Positives = 45/84 (53%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IP LE +R G Y++ P L T +KK LF AG Sbjct: 288 GFQTHLKWGEQKRVFQMIPSLENAEFVRYGVMHRNSYMDSPNLLEQTYRSKKQPNLFFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GLVAGIN+AR Sbjct: 348 QMTGVEGYVESAASGLVAGINAAR 371 >gi|293374712|ref|ZP_06621020.1| tRNA:M(5)U-54 methyltransferase [Turicibacter sanguinis PC909] gi|325840601|ref|ZP_08167082.1| tRNA:m(5)U-54 methyltransferase [Turicibacter sp. HGF1] gi|292646626|gb|EFF64628.1| tRNA:M(5)U-54 methyltransferase [Turicibacter sanguinis PC909] gi|325490250|gb|EGC92583.1| tRNA:m(5)U-54 methyltransferase [Turicibacter sp. HGF1] Length = 432 Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 36/84 (42%), Positives = 46/84 (54%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + ++ IPGLE I+R G +IN P L T + K LF AG Sbjct: 277 GFQTHLKWGEQKRIVQMIPGLENAEIVRYGVMHRNSFINSPVLLNATYQFKAREDLFFAG 336 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA G+VAGIN A+ Sbjct: 337 QLTGVEGYVESAASGMVAGINMAK 360 >gi|307297543|ref|ZP_07577349.1| gid protein [Thermotogales bacterium mesG1.Ag.4.2] gi|306916803|gb|EFN47185.1| gid protein [Thermotogales bacterium mesG1.Ag.4.2] Length = 431 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 51/167 (30%), Positives = 76/167 (45%), Gaps = 7/167 (4%) Query: 254 MENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTA 313 E I S I D +GP + D I G+ + L E L+ ++ G T Sbjct: 226 FEEIARSGI---DALRFGPMKPVGLIDPIT--GKEPYAVVQLRKENLSGSLLGIVGFQTR 280 Query: 314 LPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGT 372 L Q + + IP L V+IIR G +++ P+ L P L+++ GLF AGQI+G Sbjct: 281 LKWREQKRILSLIPALRNVDIIRYGVMHRNTFLDSPRLLNPDLQSRNHKGLFFAGQISGL 340 Query: 373 TGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 GY EA G +A IN+ R + + IG +I+ +T G Sbjct: 341 EGYVEAIVSGRLAAINADRYVRGKQTV-IPPVGTMIGGLINHITVSG 386 >gi|260890747|ref|ZP_05902010.1| glucose inhibited division protein A [Leptotrichia hofstadii F0254] gi|260859300|gb|EEX73800.1| glucose inhibited division protein A [Leptotrichia hofstadii F0254] Length = 136 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 69/117 (58%), Gaps = 7/117 (5%) Query: 503 TAYEFLSYPDFSIQNLFSICPDARKFSSLVIE-----RLQIESSYAAYTGRQM-IEAKEI 556 T E L P + Q++ I +L + ++++++ Y Y + + I K+ Sbjct: 16 TLKEILRRPKVTYQDIKYIAEIIENVPNLNFDDETEYQIEVQTKYEGYIAKAIQIMEKQQ 75 Query: 557 KFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYI 613 K ++K+ IPK+FDY ++ ++ E K++L +P+N+ QAS++ G+TPA +++LL+Y+ Sbjct: 76 KLDDKK-IPKNFDYDNMKGITREAKQRLKENRPYNVGQASRMSGVTPADISVLLMYL 131 >gi|329766927|ref|ZP_08258455.1| methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase trmFO [Gemella haemolysans M341] gi|328837652|gb|EGF87277.1| methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase trmFO [Gemella haemolysans M341] Length = 434 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 6/114 (5%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + I IPGLE NI+R G Y+N P+ L T K+ ++ AG Sbjct: 280 GFQTHLKWGEQKRIINMIPGLENANIVRYGVMHRNTYLNSPQLLEKTYRLKEEKNIYFAG 339 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM---IDDLTSK 418 Q+ G GY E+AA G+VA +N+ + + + T++ IG M I D TSK Sbjct: 340 QMTGVEGYVESAASGIVAALNALYNTEGREVVF--PTETMIGAMANYIVDSTSK 391 Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust. Identities = 38/130 (29%), Positives = 54/130 (41%), Gaps = 25/130 (19%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGG----LG 54 VIVIG G AG EAA AK G L HKT G + C+ ++ Sbjct: 5 VIVIGAGLAGSEAAWQLAKRGVKVDLYEMRPKKMTPAHKTQNFGELVCSNSLRANNITNA 64 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L E+ LD ++ + ADA + PA G DR+ + + I + Sbjct: 65 VGLLKEEMRMLDSIIIKCADATQV----------PA--GGALAVDRDKFSEMITETIKNH 112 Query: 115 ENLDVIQGEV 124 N++VI E+ Sbjct: 113 PNINVIGEEL 122 >gi|66576108|gb|AAY51661.1| mitochondrial MTO1 [Lemur catta] Length = 51 Score = 60.8 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 24/51 (47%), Positives = 36/51 (70%) Query: 317 EIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAG 367 E+Q + I I GLEK +I PGY ++YDY++P+++ P+LET + LF AG Sbjct: 1 ELQEKMITCIRGLEKAKMIHPGYGVQYDYLDPRQITPSLETHLVQRLFFAG 51 >gi|317050677|ref|YP_004111793.1| gid protein [Desulfurispirillum indicum S5] gi|316945761|gb|ADU65237.1| gid protein [Desulfurispirillum indicum S5] Length = 438 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 41/104 (39%), Positives = 51/104 (49%), Gaps = 1/104 (0%) Query: 286 GERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDY 345 GER + L E LN + G T L + Q + R IPGLE N +R G Y Sbjct: 255 GERFHAVVQLRRESLNDNAWNLVGFQTKLIQSEQKRVFRLIPGLEAANFLRLGSMHRNTY 314 Query: 346 IN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGIN 388 IN P+ L K GL+LAGQI G GY E+ A G VA ++ Sbjct: 315 INGPRFLEADYRVKDHPGLWLAGQITGVEGYIESVASGHVAALS 358 >gi|323697759|ref|ZP_08109671.1| gid protein [Desulfovibrio sp. ND132] gi|323457691|gb|EGB13556.1| gid protein [Desulfovibrio desulfuricans ND132] Length = 440 Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 44/136 (32%), Positives = 66/136 (48%), Gaps = 2/136 (1%) Query: 284 RFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEY 343 R GER + L E + G T L Q + R IPGLE +R G Sbjct: 258 RTGERPFAIVQLRTENADKTAFNLVGFQTKLKYPEQKRIFRMIPGLENAEFLRLGSIHRN 317 Query: 344 DYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFS 402 Y+N P+ L TL+ K G +LAGQI G GY E+AA GL G++ R+ + + + Sbjct: 318 TYVNAPEVLDETLQLKNRPGTYLAGQITGVEGYLESAACGLWLGLSLGRRL-RGEAVIDP 376 Query: 403 RTDSYIGVMIDDLTSK 418 ++ +G +++ L +K Sbjct: 377 PVETALGALMNHLRTK 392 >gi|313892545|ref|ZP_07826132.1| tRNA:m(5)U-54 methyltransferase [Dialister microaerophilus UPII 345-E] gi|313118942|gb|EFR42147.1| tRNA:m(5)U-54 methyltransferase [Dialister microaerophilus UPII 345-E] Length = 431 Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 36/85 (42%), Positives = 45/85 (52%), Gaps = 1/85 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF-PTLETKKISGLFLAG 367 G T L Q + IPGLE +R G YIN EL T+ETKK GLF AG Sbjct: 279 GFQTHLKWGEQKRVFGMIPGLENAEFVRYGVMHRNTYINTPELLNETMETKKREGLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARK 392 Q+ G GY E+AA G+VA ++ + Sbjct: 339 QMTGVEGYIESAASGIVAAYSATAR 363 >gi|189220272|ref|YP_001940912.1| tRNA:m(5)U-54 MTase Gid, NAD(FAD)-utilizing enzyme [Methylacidiphilum infernorum V4] gi|189187130|gb|ACD84315.1| tRNA:m(5)U-54 MTase Gid, NAD(FAD)-utilizing enzyme [Methylacidiphilum infernorum V4] Length = 445 Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 40/109 (36%), Positives = 56/109 (51%), Gaps = 2/109 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L + Q + R IP L+ + IR G +IN P+ L PTL+ + L AG Sbjct: 285 GFQTNLTFKEQDRIFRIIPALKNAHFIRYGQLHRNTFINSPRVLLPTLQFRANPLLLFAG 344 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 Q+ G GY A GLVAGIN+AR + + F R + IG ++ +T Sbjct: 345 QLAGCEGYAGNIASGLVAGINAARIFQGREPVVFPR-QTMIGELLWYIT 392 Score = 43.9 bits (102), Expect = 0.075, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 25/130 (19%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIG----GLG 54 ++V+GGG AG EAA A+ L H T + + C+ ++G Sbjct: 9 IVVVGGGLAGSEAAWQIAQKNIPVFLYEMRPFEPTGAHSTGHLAEIVCSNSLGSNLLSNA 68 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L++E+ + L+ R+AD+ + PA G DRE + LA+ R +L Sbjct: 69 SGLLLQELRIFNSLLVRIADSCAL----------PA--GKALAVDRERFSLAVTRHLLKH 116 Query: 115 ENLDVIQGEV 124 + VI+ E+ Sbjct: 117 PLITVIRKEL 126 >gi|119511325|ref|ZP_01630439.1| Gid protein [Nodularia spumigena CCY9414] gi|119464031|gb|EAW44954.1| Gid protein [Nodularia spumigena CCY9414] Length = 437 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 47/136 (34%), Positives = 62/136 (45%), Gaps = 3/136 (2%) Query: 257 IKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPE 316 I+ A D YGP + D R GER + L E + G T L Sbjct: 231 IEEQAHRGEDTMRYGPLKPVGLSDN--RTGERPYAVVQLRQEDKAGQLWNMVGFQTNLRW 288 Query: 317 EIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGY 375 Q + R IPGLE +R G ++N P+ + TL+ K+ L AGQ+ GT GY Sbjct: 289 GEQKRVFRLIPGLENAEFVRLGVMHRNTFLNAPQLMHSTLQFKQRPTLLAAGQLIGTEGY 348 Query: 376 EEAAAQGLVAGINSAR 391 AAA G +AG N+AR Sbjct: 349 TAAAADGWLAGTNAAR 364 >gi|224541325|ref|ZP_03681864.1| hypothetical protein CATMIT_00485 [Catenibacterium mitsuokai DSM 15897] gi|224525762|gb|EEF94867.1| hypothetical protein CATMIT_00485 [Catenibacterium mitsuokai DSM 15897] Length = 430 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 37/96 (38%), Positives = 47/96 (48%), Gaps = 1/96 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + I IPGLE +I+R G Y N P L PT + K LF AG Sbjct: 276 GFQTHLKWGEQDRIIHMIPGLENASIVRYGIMHRNCYFNSPTYLNPTYQFKNREDLFFAG 335 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSR 403 Q+ G GY E+A G+VAG N R + + + R Sbjct: 336 QMTGVEGYVESAQSGIVAGKNMVRYLKGEELLTYPR 371 >gi|66576098|gb|AAY51656.1| mitochondrial MTO1 [Colobus guereza] Length = 51 Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats. Identities = 23/51 (45%), Positives = 37/51 (72%) Query: 317 EIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAG 367 ++Q + I I GLEK +I+PGY ++YDY++P+++ P+LET + LF AG Sbjct: 1 DLQEKMITCIRGLEKAKVIQPGYGVQYDYLDPRQITPSLETHLVQRLFFAG 51 >gi|78213211|ref|YP_381990.1| tRNA (uracil-5-)-methyltransferase Gid [Synechococcus sp. CC9605] gi|123577957|sp|Q3AIZ7|TRMFO_SYNSC RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|78197670|gb|ABB35435.1| gid protein [Synechococcus sp. CC9605] Length = 456 Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 2/139 (1%) Query: 267 IKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTI 326 I + PR+ + D+ VR +R + L E + + G T L Q + ++ I Sbjct: 253 IGLWDPRWG-DVNDRDVRRAKRAYAVVQLRQEDKDGRLWNLVGFQTNLKWGEQKRVLQMI 311 Query: 327 PGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVA 385 PGL + +R G ++ +P+ L PTL+ ++ L AGQI GT GY A A G +A Sbjct: 312 PGLGQAEFVRFGVMHRNTFLESPQLLQPTLQFRQRPNLLAAGQITGTEGYAAAVAGGWLA 371 Query: 386 GINSARKSNKLDCICFSRT 404 G N+AR + L+ I T Sbjct: 372 GTNAARLALGLEPIDLPAT 390 >gi|238926946|ref|ZP_04658706.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Selenomonas flueggei ATCC 43531] gi|238885180|gb|EEQ48818.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Selenomonas flueggei ATCC 43531] Length = 440 Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 45/143 (31%), Positives = 62/143 (43%), Gaps = 3/143 (2%) Query: 266 DIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRT 325 D YGP +E I GER + L + + G T L Q + R Sbjct: 239 DTLLYGPLKPVGLEHPIT--GERPYAVVQLRQDNAAGSIYNIVGFQTHLKWPEQRRVFRM 296 Query: 326 IPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLV 384 IPGL +R G +I+ P+ L PT + L AGQ+ G GY E+AA GLV Sbjct: 297 IPGLAAAEFLRYGVMHRNSFISAPRHLRPTFQYAGNDRLLFAGQMTGVEGYVESAASGLV 356 Query: 385 AGINSARKSNKLDCICFSRTDSY 407 AG N+AR + + F + + Sbjct: 357 AGKNAARLARGESPVLFPTSTCH 379 >gi|291295960|ref|YP_003507358.1| gid protein [Meiothermus ruber DSM 1279] gi|290470919|gb|ADD28338.1| gid protein [Meiothermus ruber DSM 1279] Length = 443 Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 18/181 (9%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q +++IPGLE I+R G Y+ P+ + PTL+ + L ++G Sbjct: 277 GFQTGLKWGDQKLVVQSIPGLENAEIVRYGVMHRNTYLCAPRLIEPTLQFRAHPNLLVSG 336 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 + G GY E+AA G +AG+N+AR + + + + +G ++ L S Sbjct: 337 VLCGVEGYLESAATGFLAGLNAARLAQGQEALVPPEA-TMLGGLVRYLASANP------- 388 Query: 428 TSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKN 487 + +P NA+ L P + G E+R + F + + E F L +S+ L S+ Sbjct: 389 -------DNFQPMNANWGLVPAEVGKGKKSEKRARMFHRGLAE--FRAWLARSVGLVSEE 439 Query: 488 L 488 + Sbjct: 440 I 440 Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust. Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 25/130 (19%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGLG---- 54 V VIG G +G EAA AA+LGA L H+T + C+ ++GG G Sbjct: 4 VHVIGAGLSGAEAAFTAARLGAQVRLYEMRPRRMTPAHQTGHFAELVCSNSLGGEGETNA 63 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 KG L E+ A L+ + AD RV PA G +RE + + R + + Sbjct: 64 KGLLQAELRAAGSLVMQAAD----HNRV------PA--GGALAVEREGFSQEITRRLEAH 111 Query: 115 ENLDVIQGEV 124 N++V++ E+ Sbjct: 112 PNIEVVREEL 121 >gi|320334843|ref|YP_004171554.1| methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO [Deinococcus maricopensis DSM 21211] gi|319756132|gb|ADV67889.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)-meth yltransferasetrmFO [Deinococcus maricopensis DSM 21211] Length = 462 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 1/93 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q ++ IPGLE I+R G Y+N P+ L T++ + +AG Sbjct: 276 GFQTGLKWGDQKAVVQLIPGLENAEIVRYGVMHRNTYLNAPEVLTETMQLRADPEKLVAG 335 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCIC 400 + GT GY E+AA G +AG+N+AR + L+ +C Sbjct: 336 VLAGTEGYLESAATGWLAGLNAARLAQGLEPVC 368 >gi|309800198|ref|ZP_07694381.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gid [Streptococcus infantis SK1302] gi|308116169|gb|EFO53662.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gid [Streptococcus infantis SK1302] Length = 141 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 33/67 (49%), Positives = 40/67 (59%), Gaps = 1/67 (1%) Query: 326 IPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLV 384 IPGLE +R G Y++ P L T +KK LF AGQ+ G GY E+AA GLV Sbjct: 2 IPGLENAEFVRYGVMHRNSYMDSPNFLEQTYRSKKQPNLFFAGQMTGVEGYVESAASGLV 61 Query: 385 AGINSAR 391 AGIN+AR Sbjct: 62 AGINAAR 68 >gi|225571869|ref|ZP_03780739.1| hypothetical protein CLOHYLEM_07843 [Clostridium hylemonae DSM 15053] gi|225159474|gb|EEG72093.1| hypothetical protein CLOHYLEM_07843 [Clostridium hylemonae DSM 15053] Length = 127 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 37/115 (32%), Positives = 62/115 (53%), Gaps = 4/115 (3%) Query: 503 TAYEFLSYPDFSIQNLFSICPDARKF----SSLVIERLQIESSYAAYTGRQMIEAKEIKF 558 T E + P+ S + L I F +IE++ I Y Y RQ + ++ K Sbjct: 11 TLAELIRRPELSYEALRPIDKKRPVFPEGLEEEIIEQVNISIKYDGYIKRQEKQVEQFKK 70 Query: 559 EEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYI 613 EKR IP++ DY + +L E +KL +P ++ QAS+I G++PA +++LL+Y+ Sbjct: 71 LEKRKIPENIDYDDIKSLRIEAVQKLKEYRPVSIGQASRISGVSPADISVLLVYL 125 >gi|281417193|ref|ZP_06248213.1| gid protein [Clostridium thermocellum JW20] gi|281408595|gb|EFB38853.1| gid protein [Clostridium thermocellum JW20] Length = 436 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 39/104 (37%), Positives = 53/104 (50%), Gaps = 2/104 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE +R G +IN P L T KK ++ AG Sbjct: 279 GFQTRLKWPEQKRVFRLIPGLENAEFVRYGVMHRNTFINSPVLLDATYCLKKSPNIYFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 QI G GY E+A+ G+VAGIN+A D + F ++ + IG + Sbjct: 339 QITGVEGYVESASSGMVAGINAAMDFLGKDRVVFPKSTA-IGAL 381 Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust. Identities = 38/128 (29%), Positives = 51/128 (39%), Gaps = 25/128 (19%) Query: 10 VIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGG----LGKG 56 VIG G AGCEAA AK G L H T + C+ ++ G Sbjct: 7 VIGAGLAGCEAAWQIAKRGIKVKLFEMKPKKFSPAHHMETFAELVCSNSLRSNQLENAVG 66 Query: 57 HLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQEN 116 L E+ LD ++ + ADAA + PA G DR + + I EN Sbjct: 67 LLKEEMRLLDSIIMKCADAAQV----------PA--GGALAVDRTKFSQMVTELIKQNEN 114 Query: 117 LDVIQGEV 124 ++VI EV Sbjct: 115 IEVINEEV 122 >gi|125972982|ref|YP_001036892.1| gid protein [Clostridium thermocellum ATCC 27405] gi|256004779|ref|ZP_05429754.1| gid protein [Clostridium thermocellum DSM 2360] gi|171769985|sp|A3DCM0|TRMFO_CLOTH RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|125713207|gb|ABN51699.1| gid protein [Clostridium thermocellum ATCC 27405] gi|255991229|gb|EEU01336.1| gid protein [Clostridium thermocellum DSM 2360] gi|316940782|gb|ADU74816.1| gid protein [Clostridium thermocellum DSM 1313] Length = 436 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 39/104 (37%), Positives = 53/104 (50%), Gaps = 2/104 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE +R G +IN P L T KK ++ AG Sbjct: 279 GFQTRLKWPEQKRVFRLIPGLENAEFVRYGVMHRNTFINSPVLLDATYCLKKSPNIYFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 QI G GY E+A+ G+VAGIN+A D + F ++ + IG + Sbjct: 339 QITGVEGYVESASSGMVAGINAAMDFLGKDRVVFPKSTA-IGAL 381 Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 51/128 (39%), Gaps = 25/128 (19%) Query: 10 VIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGG----LGKG 56 VIG G AGCEAA AK G L H T + C+ ++ G Sbjct: 7 VIGAGLAGCEAAWQIAKRGIKVKLFEMKPKKFSPAHHMETFAELVCSNSLRSNQLENAVG 66 Query: 57 HLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQEN 116 L E+ L+ ++ + ADAA + PA G DR + + I EN Sbjct: 67 LLKEEMRLLNSIIMKCADAAQV----------PA--GGALAVDRTKFSQMVTELIKQNEN 114 Query: 117 LDVIQGEV 124 ++VI EV Sbjct: 115 IEVINEEV 122 >gi|332981424|ref|YP_004462865.1| gid protein [Mahella australiensis 50-1 BON] gi|332699102|gb|AEE96043.1| gid protein [Mahella australiensis 50-1 BON] Length = 440 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 34/83 (40%), Positives = 43/83 (51%), Gaps = 1/83 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGL +R G YI+ P L PT + + + AG Sbjct: 275 GFQTHLKWGEQQRVFRLIPGLGNAEFVRYGVMHRNTYIHSPHLLLPTYQLRDKPNILFAG 334 Query: 368 QINGTTGYEEAAAQGLVAGINSA 390 QI G GY E+A+ GLVAGIN+A Sbjct: 335 QITGVEGYVESASSGLVAGINAA 357 >gi|220903788|ref|YP_002479100.1| tRNA (uracil-5-)-methyltransferase Gid [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868087|gb|ACL48422.1| gid protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 455 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 54/181 (29%), Positives = 77/181 (42%), Gaps = 23/181 (12%) Query: 284 RFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEY 343 R G R + L E N+D G T L + Q + R +PGLEK R G Sbjct: 270 RTGRRPWAILQLRAENANSDTCNLVGCQTKLTQGEQARVFRLVPGLEKAEFARFGSMHRN 329 Query: 344 DYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFS 402 Y+N P L L K G++LAGQI G GY E+AA GL + ++ +D + Sbjct: 330 TYVNAPHVLDADLSLKARPGIYLAGQITGVEGYVESAASGLWLALLLDARARGID-LERP 388 Query: 403 RTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQK 462 +S G ++ L + P + F +P NA L P +GER +K Sbjct: 389 PAESAFGALLGHLQT-----PAKRF----------QPSNAHFGLMPD------LGERARK 427 Query: 463 R 463 + Sbjct: 428 K 428 >gi|167951230|ref|ZP_02538304.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 77 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 31/74 (41%), Positives = 45/74 (60%) Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y RQ E + + E +P DFDY + LS E++EK +P L QA +I G+TP Sbjct: 3 GYIERQRDEIERQRNNEAVQLPHDFDYDKVCGLSAEVREKFQRHRPETLGQAGRIPGITP 62 Query: 604 AALNLLLIYIKKNT 617 AAL+LLLI++K+ + Sbjct: 63 AALSLLLIHLKRRS 76 >gi|332866929|ref|ZP_08437270.1| hypothetical protein HMPREF0020_00881 [Acinetobacter baumannii 6013113] gi|332734352|gb|EGJ65478.1| hypothetical protein HMPREF0020_00881 [Acinetobacter baumannii 6013113] Length = 49 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 29/45 (64%), Positives = 34/45 (75%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNP 48 + YDVIVIGGGHAG EAA AA++G T L+TH T+G MSCNP Sbjct: 5 KVYDVIVIGGGHAGTEAALAAARMGRQTLLLTHNIETLGQMSCNP 49 >gi|302787479|ref|XP_002975509.1| hypothetical protein SELMODRAFT_415635 [Selaginella moellendorffii] gi|300156510|gb|EFJ23138.1| hypothetical protein SELMODRAFT_415635 [Selaginella moellendorffii] Length = 684 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 51/177 (28%), Positives = 76/177 (42%), Gaps = 43/177 (24%) Query: 78 IQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSI 137 +Q RVLN KGPAV R Q D+ + M++ + + ENL F E + + Sbjct: 492 LQRRVLNRSKGPAVWALRAQTDKREHAREMKKVVETTENL---------FIRESMVTEVL 542 Query: 138 VMQDNSMIRCST----------VVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFM 187 V +++ + R T VVLTT T + G I +G+ + G G+ Sbjct: 543 VGRNDDVERVGTFFGVSFFAPAVVLTTRTLMNGKIWVGRKSMSTGGAGE----------- 591 Query: 188 KFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 LKTGTPAR+D T+ + E Q +LI D + + +E G R Sbjct: 592 --------LKTGTPARVDVWTVDTSRLESQPETHKLI-----KDNLKLQHMEDGWNR 635 >gi|126696561|ref|YP_001091447.1| tRNA (uracil-5-)-methyltransferase Gid [Prochlorococcus marinus str. MIT 9301] gi|205830315|sp|A3PDM1|TRMFO_PROM0 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|126543604|gb|ABO17846.1| NAD binding site:Glucose inhibited division protein A family [Prochlorococcus marinus str. MIT 9301] Length = 470 Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 55/158 (34%), Positives = 82/158 (51%), Gaps = 6/158 (3%) Query: 265 GDIKSYG---PRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQ 321 G +KS G P++ + D+ R +R + L E L ++ G T L Q + Sbjct: 247 GPLKSIGLWNPKWG-DLFDRENRLKKRPHAVVQLRKEDLEGKLLNMVGFQTNLKWSEQKR 305 Query: 322 FIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAGQINGTTGYEEAAA 380 R IPGLEK +R G ++ +PK L PTL+ K LF AGQI GT GY AAA Sbjct: 306 IFRMIPGLEKAEFVRFGVMHRNTFLESPKLLLPTLQFMKRENLFAAGQITGTEGYAAAAA 365 Query: 381 QGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 GL+AGIN++ + + F +S IG +++ +++K Sbjct: 366 GGLLAGINASLLAKGKKPVSFP-DESMIGSLMNFISNK 402 Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust. Identities = 36/140 (25%), Positives = 58/140 (41%), Gaps = 25/140 (17%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGL---- 53 +V+VIG G AG EAA A G L+ H TS G + C+ + G L Sbjct: 5 EVLVIGAGLAGSEAAWQLANSGVPVKLVEMRPIKSTPAHHTSEFGELVCSNSFGALSPDR 64 Query: 54 GKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILS 113 G L +E+ L+ + AD + PA G DR + A+ ++ + Sbjct: 65 AAGLLQKELRFFKSLIVQTADKFAV----------PA--GGALAVDRSKFSYALTEQLSN 112 Query: 114 QENLDVIQGEVAGFNTEKNI 133 +++ + E +E+NI Sbjct: 113 HPLVEIKRFEQLDIPSEENI 132 >gi|169836120|ref|ZP_02869308.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [candidate division TM7 single-cell isolate TM7a] Length = 68 Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats. Identities = 31/66 (46%), Positives = 37/66 (56%) Query: 19 EAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGI 78 EAA AA+ G AL T I MSCNP++GG GK HLV E+ L G M R D + Sbjct: 2 EAALAAARYGLKIALFTIYLDNIAMMSCNPSVGGPGKSHLVSELGMLGGEMARHIDNYNL 61 Query: 79 QFRVLN 84 Q + LN Sbjct: 62 QLKNLN 67 >gi|311234467|gb|ADP87321.1| gid protein [Desulfovibrio vulgaris RCH1] Length = 470 Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 91/387 (23%), Positives = 143/387 (36%), Gaps = 38/387 (9%) Query: 10 VIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDG-- 67 +IG G AGCE A A+ G L K + NP +G L + +R D G Sbjct: 9 IIGAGLAGCECALRLARAGVRVTLFEMKPAAFSPAHSNPDLGELVCSNSLRSDDIASGVG 68 Query: 68 -LMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAG 126 L + + I + + PA + LA+ R++ ++ VI+ E G Sbjct: 69 LLKQEMRELGSIVMEAADATRVPAGKA-----------LAVDRDLFARHITAVIEAE-PG 116 Query: 127 FNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRM----GDSPSNSL 182 E+ ++S + D ++ VV+ G + + G++ +P + Sbjct: 117 ITLERREVAS--LDDPALASADVVVIAAGPLASAGLSDSLAAVVGGQLYFYDAIAPIIAA 174 Query: 183 FNSFMKFDFDTGRLKTGTPARL-DGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 + + F R G P D ++ E E L+ +K+ +R E Sbjct: 175 ESIDLSIVFSGSRY--GEPGEEGDYLNCPMNRDEYDAFYEALL----AAEKVPSRDFEKE 228 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 + + E + ++ G K G D R G R I L E N Sbjct: 229 LHFEGCMPIEALAERGPRTLVF-GPFKPVG------FTDP--RTGTRPYAIIQLRAENRN 279 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKI 360 G T L Q + R IPGL +R G Y+N P+ L L + Sbjct: 280 KTAFNIVGCQTKLKYAEQERVFRMIPGLAGAEFVRHGSVHRNTYVNAPRVLADDLSLRAD 339 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGI 387 +FLAGQI G GY E+AA G+ G+ Sbjct: 340 KRVFLAGQITGVEGYVESAACGMWLGM 366 >gi|46580755|ref|YP_011563.1| tRNA (uracil-5-)-methyltransferase Gid [Desulfovibrio vulgaris str. Hildenborough] gi|81404580|sp|Q729K0|TRMFO_DESVH RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|46450175|gb|AAS96823.1| gid protein [Desulfovibrio vulgaris str. Hildenborough] Length = 474 Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 91/387 (23%), Positives = 143/387 (36%), Gaps = 38/387 (9%) Query: 10 VIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDG-- 67 +IG G AGCE A A+ G L K + NP +G L + +R D G Sbjct: 13 IIGAGLAGCECALRLARAGVRVTLFEMKPAAFSPAHSNPDLGELVCSNSLRSDDIASGVG 72 Query: 68 -LMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAG 126 L + + I + + PA + LA+ R++ ++ VI+ E G Sbjct: 73 LLKQEMRELGSIVMEAADATRVPAGKA-----------LAVDRDLFARHITAVIEAE-PG 120 Query: 127 FNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRM----GDSPSNSL 182 E+ ++S + D ++ VV+ G + + G++ +P + Sbjct: 121 ITLERREVAS--LDDPALASADVVVIAAGPLASAGLSDSLAAVVGGQLYFYDAIAPIIAA 178 Query: 183 FNSFMKFDFDTGRLKTGTPARL-DGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 + + F R G P D ++ E E L+ +K+ +R E Sbjct: 179 ESIDLSIVFSGSRY--GEPGEEGDYLNCPMNRDEYDAFYEALL----AAEKVPSRDFEKE 232 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 + + E + ++ G K G D R G R I L E N Sbjct: 233 LHFEGCMPIEALAERGPRTLVF-GPFKPVG------FTDP--RTGTRPYAIIQLRAENRN 283 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKI 360 G T L Q + R IPGL +R G Y+N P+ L L + Sbjct: 284 KTAFNIVGCQTKLKYAEQERVFRMIPGLAGAEFVRHGSVHRNTYVNAPRVLADDLSLRAD 343 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGI 387 +FLAGQI G GY E+AA G+ G+ Sbjct: 344 KRVFLAGQITGVEGYVESAACGMWLGM 370 >gi|163868075|ref|YP_001609279.1| tRNA (uracil-5-)-methyltransferase Gid [Bartonella tribocorum CIP 105476] gi|205830324|sp|A9ISB8|TRMFO_BART1 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|161017726|emb|CAK01284.1| gid-family protein [Bartonella tribocorum CIP 105476] Length = 474 Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 53/162 (32%), Positives = 77/162 (47%), Gaps = 12/162 (7%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLEK R G Y+N P L TL K+ L AG Sbjct: 291 GFQTKLKYGEQVRIFRMIPGLEKAEFARLGGLHRNTYLNSPIILDQTLRLKQKKQLRFAG 350 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 QI G GY E+AA GL+AG +A + + +C C + G +++ +T +++ Sbjct: 351 QITGCEGYVESAAIGLLAGRFAAAEYHH-NCPCLPPQTTAFGALLNHITGGHIID----- 404 Query: 428 TSRAEYRISLRPDNADNRLTPIGMKLGCIGER---RQKRFAK 466 AE R S +P N + L P + G+R ++K+ AK Sbjct: 405 -EEAE-RPSFQPMNINFGLFPPISPIRYSGKRLPSKEKKLAK 444 >gi|294102503|ref|YP_003554361.1| gid protein [Aminobacterium colombiense DSM 12261] gi|293617483|gb|ADE57637.1| gid protein [Aminobacterium colombiense DSM 12261] Length = 438 Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 49/162 (30%), Positives = 77/162 (47%), Gaps = 12/162 (7%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T+L Q++ R IPGLE R G Y+N PK L +L + LFLAG Sbjct: 280 GFQTSLKWGEQNRVFRMIPGLENAEFARYGVMHRNIYVNAPKVLDGSLRLRGSKALFLAG 339 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDL--TSKGVLEPYR 425 QI G GY E+ A GLVAG++ A + L + + ++ IG ++ L T V P Sbjct: 340 QITGVEGYLESTAMGLVAGLHVAFCAAGLQIPLWPK-ETAIGSLLRYLAETDPKVFHPMN 398 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKY 467 + + + P + D ++ P ++ +GER + ++ Sbjct: 399 V-------NLGIFP-SLDVKIRPKSLRCQKVGERALRALEEF 432 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 35/148 (23%), Positives = 66/148 (44%), Gaps = 25/148 (16%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGG 52 + RS +++++GGG AG EAA A+ G S L+ H+T +G + C+ ++G Sbjct: 1 MRRSDEILIVGGGLAGSEAAWQLAQRGYSVCLVEMRPVATTPAHQTDMMGELVCSNSLGA 60 Query: 53 LG----KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQ 108 G L E+ L+ L+ AD + + PA G DR ++ + Sbjct: 61 DNLTSPAGILKGELRYLNSLIMEAADHSSV----------PA--GKALAVDRNVFAGYIT 108 Query: 109 REILSQENLDVIQGEVAGFNTEKNIISS 136 +++ + + + E+ E II++ Sbjct: 109 KKLSGHPQIRIERREITELPEEPAIIAT 136 >gi|158335804|ref|YP_001516978.1| tRNA (uracil-5-)-methyltransferase Gid [Acaryochloris marina MBIC11017] gi|205830303|sp|B0C6V8|TRMFO_ACAM1 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|158306045|gb|ABW27662.1| glucose inhibited division protein A [Acaryochloris marina MBIC11017] Length = 465 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 36/97 (37%), Positives = 49/97 (50%), Gaps = 1/97 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G +IN P+ L PTL+ K+ L AG Sbjct: 295 GFQTNLRWGEQKRVFQMIPGLESAEFVRMGVMHRNTFINAPELLHPTLQFKQRPTLLAAG 354 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 Q+ GT GY A A G +AG N+ R + L+ + T Sbjct: 355 QLIGTEGYTAATAGGWLAGTNAVRLAQGLNPVVLPTT 391 >gi|288818938|ref|YP_003433286.1| glucose-inhibited division protein [Hydrogenobacter thermophilus TK-6] gi|288788338|dbj|BAI70085.1| glucose-inhibited division protein [Hydrogenobacter thermophilus TK-6] gi|308752524|gb|ADO46007.1| gid protein [Hydrogenobacter thermophilus TK-6] Length = 442 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 48/156 (30%), Positives = 74/156 (47%), Gaps = 5/156 (3%) Query: 270 YGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGL 329 +GP + DK GER + L E ++ G T + Q + +R IP L Sbjct: 241 FGPMKPVGLWDKTK--GERPFAVVQLRKENREGTLLSLVGFQTRMTYSEQKRVLRLIPCL 298 Query: 330 EKVNIIRPGYAIEYDYINP-KELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGIN 388 +R G +I K L P L +K+ +F AGQI G GY +AA G++AGIN Sbjct: 299 RNAVFVRLGSMHRNTFIQSNKVLTPFLNMRKMENIFFAGQITGVEGYIASAATGILAGIN 358 Query: 389 SARKSNKLDCICFSRTDSYIGVMIDDLTSK-GVLEP 423 + R L + + ++ +G +I +T+K G L+P Sbjct: 359 AGRLLKGLKPV-YPPEETMLGSLIKYITTKEGQLQP 393 >gi|329121222|ref|ZP_08249849.1| tRNA:M(5)U-54 methyltransferase [Dialister micraerophilus DSM 19965] gi|327470156|gb|EGF15619.1| tRNA:M(5)U-54 methyltransferase [Dialister micraerophilus DSM 19965] Length = 431 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 35/85 (41%), Positives = 45/85 (52%), Gaps = 1/85 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF-PTLETKKISGLFLAG 367 G T L Q + IPGL+ +R G YIN EL T+ETKK GLF AG Sbjct: 279 GFQTHLKWGEQKRVFGMIPGLQNAEFVRYGVMHRNTYINTPELLNETMETKKREGLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARK 392 Q+ G GY E+AA G+VA ++ + Sbjct: 339 QMTGVEGYIESAASGIVAAYSATAR 363 >gi|86607297|ref|YP_476060.1| tRNA (uracil-5-)-methyltransferase Gid [Synechococcus sp. JA-3-3Ab] gi|123504911|sp|Q2JRF7|TRMFO_SYNJA RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|86555839|gb|ABD00797.1| gid protein [Synechococcus sp. JA-3-3Ab] Length = 451 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 38/110 (34%), Positives = 56/110 (50%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE +R G ++N P+ L PTL+ ++ L AG Sbjct: 289 GFQTNLKWGEQQRVFRLIPGLEAAEFVRFGVMHRNTFLNSPQLLLPTLQFRRRPTLLAAG 348 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ GT GY A A G +AG N+AR + L I ++ +G + ++S Sbjct: 349 QLVGTEGYACAVAGGWLAGQNAARLALGLPLITLP-PETMMGSLFQFISS 397 >gi|238019260|ref|ZP_04599686.1| hypothetical protein VEIDISOL_01124 [Veillonella dispar ATCC 17748] gi|237863959|gb|EEP65249.1| hypothetical protein VEIDISOL_01124 [Veillonella dispar ATCC 17748] Length = 438 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 103/421 (24%), Positives = 151/421 (35%), Gaps = 72/421 (17%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAI--GGL-- 53 +VIVIG G AG EAA A G L H+T + C+ ++ G + Sbjct: 5 NVIVIGAGLAGSEAAWQLANRGIHVDLYEMRPVKSSPAHQTDQFAELVCSNSLRAGNIEN 64 Query: 54 GKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILS 113 G L E+ L ++ ADA + PA G DR L+ + ++ Sbjct: 65 AVGLLKEEMRRLGSIIMECADATAV----------PA--GGALAVDRHLFSEMVTEKVKG 112 Query: 114 QENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGR 173 N+ V EV E TV+ +G + K+K G Sbjct: 113 HPNITVHHEEVTEIPAE-----------------GTVIFASGPLTSEALG-DKIKELTGE 154 Query: 174 MG----DSPSNSLFNSFMKFD--FDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFS 227 G D+ + + + +D F R G D + TE+++ + Sbjct: 155 TGFYFYDAAAPIVTAESLNYDKVFAASRYDKG-----DADYLNCPMTEEEYK-------A 202 Query: 228 FMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSG---DIKSYGPRYCPSIEDKIVR 284 F + T ++ + E I E I + D YGP + DK R Sbjct: 203 FWHELTTAEAVQP----KDFEK-EIYFEGCMPVEIMASRGEDTLRYGPLKPVGLVDK--R 255 Query: 285 FGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYD 344 E + + L E + G T L Q + IPGLE +R G Sbjct: 256 TNEESYAVVQLRKENKEGTMFNLVGFQTHLKWGEQKRVFGMIPGLENAEFVRYGVMHRNT 315 Query: 345 YINPKELF-PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSR 403 YIN EL + KK LF AGQ+ G GY E+AA GL+ G+ R + I F + Sbjct: 316 YINSPELLNHAFQLKKEPRLFFAGQMTGVEGYLESAASGLMVGLQVDRYLDDRSFIDFPK 375 Query: 404 T 404 T Sbjct: 376 T 376 >gi|284048586|ref|YP_003398925.1| gid protein [Acidaminococcus fermentans DSM 20731] gi|283952807|gb|ADB47610.1| gid protein [Acidaminococcus fermentans DSM 20731] Length = 438 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/104 (35%), Positives = 51/104 (49%), Gaps = 2/104 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE +R G + Y+N P L P ++ + AG Sbjct: 279 GFQTHLKWPEQKRVFRMIPGLENAEFVRYGVMHKNSYLNSPLLLNPDYSLRERPHFYFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 Q+ G GY E+AA GL AGI +AR + F R ++ IG + Sbjct: 339 QMTGVEGYVESAASGLAAGIYAARAMAGKPPVLFPR-ETAIGAL 381 >gi|220929472|ref|YP_002506381.1| tRNA (uracil-5-)-methyltransferase Gid [Clostridium cellulolyticum H10] gi|219999800|gb|ACL76401.1| gid protein [Clostridium cellulolyticum H10] Length = 436 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 2/113 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE +R G YIN P+ L T K L+ AG Sbjct: 279 GFQTHLKWPEQKRVFRLIPGLENAEFVRYGVMHRNTYINSPRLLDNTYRLKSNENLYFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 QI G GY E+ + G +AGIN+A + + I F + ++ +G + + ++ + + Sbjct: 339 QITGVEGYIESTSSGFIAGINAAAQCMGKERIIF-QPNTALGALSNYISDESI 390 Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 55/133 (41%), Gaps = 25/133 (18%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGG--- 52 S V VIG G AGCEAA AK G + L H ++ + C+ ++ Sbjct: 2 SRKVNVIGAGLAGCEAAYQIAKRGINVTLYEMKPQKSTPAHHSADFAELVCSNSLRSDQL 61 Query: 53 -LGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREI 111 G L E+ +D L+ + AD K PA G DRE + + R+I Sbjct: 62 ENAAGLLKEELRVMDSLIMKAADET----------KVPA--GGALAVDREGFSQYITRQI 109 Query: 112 LSQENLDVIQGEV 124 N+++I E+ Sbjct: 110 KENSNIEIIHTEM 122 >gi|313680130|ref|YP_004057869.1| gid protein [Oceanithermus profundus DSM 14977] gi|313152845|gb|ADR36696.1| gid protein [Oceanithermus profundus DSM 14977] Length = 439 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 39/101 (38%), Positives = 51/101 (50%), Gaps = 1/101 (0%) Query: 284 RFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEY 343 R GER + L E + G T L Q Q +R IPGLE+ I+R G Sbjct: 253 RTGERPFAVVQLRQEDREGRMWSLVGFQTGLKWGDQKQVVRLIPGLEQAEIVRYGVMHRN 312 Query: 344 DYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGL 383 Y+N P+ L LE KK+ G+F+AG + G GY E+AA G Sbjct: 313 TYLNAPRVLSERLELKKLPGVFVAGVLAGVEGYLESAATGW 353 >gi|289547856|ref|YP_003472844.1| gid protein [Thermocrinis albus DSM 14484] gi|289181473|gb|ADC88717.1| gid protein [Thermocrinis albus DSM 14484] Length = 440 Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 39/117 (33%), Positives = 59/117 (50%), Gaps = 3/117 (2%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINP-KELFPTLETKKISGLFLAG 367 G T + + Q + +R IP L +R G +I + L P L +K +F AG Sbjct: 279 GFQTRMTYQEQKRVLRLIPCLRNAVFVRLGSMHRNTFIQSNRVLTPFLNMRKYPNIFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK-GVLEP 423 QI G GY +AA G++AGIN+ R D + D+ +G ++ +TSK G L+P Sbjct: 339 QITGVEGYVASAATGILAGINAGRFLKGEDLVV-PPEDTMLGALVRYITSKEGQLQP 394 Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 54/130 (41%), Gaps = 25/130 (19%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGG----LG 54 V+VIGGG AG EAA A+ G L H T + + C+ G G Sbjct: 4 VVVIGGGLAGSEAAYRLAEEGFQVILYEMRPQRSTPAHSTDRLAELVCSNTFGSTELTTG 63 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L E+ L L+ R A++ + PA G DREL+ A+ I + Sbjct: 64 AGLLKAEMRLLGSLVLRCAESYSV----------PA--GTALAVDRELFSSAVTEIIQNH 111 Query: 115 ENLDVIQGEV 124 + VI+ EV Sbjct: 112 PRIRVIREEV 121 >gi|315928770|gb|EFV08044.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Campylobacter jejuni subsp. jejuni 305] Length = 74 Score = 58.9 bits (141), Expect = 3e-06, Method: Composition-based stats. Identities = 31/71 (43%), Positives = 47/71 (66%) Query: 549 QMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNL 608 Q + +++K + IP++FD+ S+ LSNE+ EKL+ KP + AS+I G+TPAAL++ Sbjct: 3 QKAQVEKMKNLSELKIPENFDFKSVSGLSNEVVEKLNHHKPPTIFAASQISGITPAALDI 62 Query: 609 LLIYIKKNTVK 619 L IYIK K Sbjct: 63 LQIYIKMQKKK 73 >gi|148242640|ref|YP_001227797.1| tRNA (uracil-5-)-methyltransferase Gid [Synechococcus sp. RCC307] gi|205830343|sp|A5GU85|TRMFO_SYNR3 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|147850950|emb|CAK28444.1| Protein gid homolog [Synechococcus sp. RCC307] Length = 456 Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 43/135 (31%), Positives = 63/135 (46%), Gaps = 9/135 (6%) Query: 266 DIKSYGP--------RYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEE 317 D YGP + + D+ VR +R + L E + + G T L Sbjct: 239 DTMRYGPLKPIGLWDQRWGDVTDRDVRRAKRAYAVVQLRQEDKDGRLWNLVGFQTNLKWG 298 Query: 318 IQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYE 376 Q + ++ IPGLE + +R G ++ P+ L PTL+ ++ L AGQI GT GY Sbjct: 299 EQKRVLQLIPGLENASFVRFGVMHRNTFLEAPQLLQPTLQFRQRPSLLAAGQITGTEGYA 358 Query: 377 EAAAQGLVAGINSAR 391 A A G +AG N+AR Sbjct: 359 AAVAGGWLAGTNAAR 373 >gi|66576106|gb|AAY51660.1| mitochondrial MTO1 [Lagothrix lagotricha] Length = 51 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 22/49 (44%), Positives = 35/49 (71%) Query: 317 EIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 E+Q + I I GLEK +I+PGY ++YDY++P+++ P+LET + LF Sbjct: 1 ELQEKMITCIRGLEKAKVIQPGYGVQYDYLDPRQITPSLETHLVQRLFF 49 >gi|260435485|ref|ZP_05789455.1| tRNA:M(5)U-54 methyltransferase [Synechococcus sp. WH 8109] gi|260413359|gb|EEX06655.1| tRNA:M(5)U-54 methyltransferase [Synechococcus sp. WH 8109] Length = 456 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 44/139 (31%), Positives = 67/139 (48%), Gaps = 2/139 (1%) Query: 267 IKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTI 326 I + PR+ + D+ VR +R + L E + + G T L Q + ++ I Sbjct: 253 IGLWDPRWG-DVNDRDVRRAKRAYAVVQLRQEDKDGRLWNLVGFQTNLKWGEQKRVLQMI 311 Query: 327 PGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVA 385 PGL + +R G ++ +P+ L PTL+ + L AGQI GT GY A A G +A Sbjct: 312 PGLGQAEFVRFGVMHRNTFLESPQLLQPTLQFLQRPNLLAAGQITGTEGYAAAVAGGWLA 371 Query: 386 GINSARKSNKLDCICFSRT 404 G N+AR + L+ I T Sbjct: 372 GTNAARLALGLEPIDLPAT 390 >gi|87124706|ref|ZP_01080554.1| probable glucose inhibited division protein [Synechococcus sp. RS9917] gi|86167585|gb|EAQ68844.1| probable glucose inhibited division protein [Synechococcus sp. RS9917] Length = 459 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 42/126 (33%), Positives = 61/126 (48%), Gaps = 2/126 (1%) Query: 267 IKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTI 326 I + PR+ + D+ VR +R + L E + + G T L Q + +R I Sbjct: 253 IGLWDPRWG-DVNDRDVRRAKRAYAVVQLRQEDKDGRLWNLVGFQTNLKWGEQKRVLRLI 311 Query: 327 PGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVA 385 PGLE +R G ++ P+ L TL+ ++ L AGQI GT GY A A G +A Sbjct: 312 PGLENAEFVRFGVMHRNTFLEAPQLLDATLQFRQRPTLLAAGQITGTEGYAAAVAGGWLA 371 Query: 386 GINSAR 391 G N+AR Sbjct: 372 GTNAAR 377 Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 13/90 (14%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGG 52 +N+ V+VIG G AG EAA A G L+ H +S + C+ + G Sbjct: 1 MNQDAPVVVIGAGLAGTEAAWQIASAGVPVRLVEMRPVRRSPAHHSSEFAELVCSNSFGA 60 Query: 53 L----GKGHLVREIDALDGLMGRVADAAGI 78 L G L E+ L L+ R ADA + Sbjct: 61 LSSDRAAGLLQEELRRLGSLVIRTADAHAV 90 >gi|325283101|ref|YP_004255642.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO [Deinococcus proteolyticus MRP] gi|324314910|gb|ADY26025.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO [Deinococcus proteolyticus MRP] Length = 459 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q ++ IPGLE I+R G Y+N P L TL+ + F+AG Sbjct: 276 GFQTGLKWGDQKDVVQLIPGLENAEIVRYGVMHRNTYLNAPAVLQETLQLRADPQKFVAG 335 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 + GT GY E+AA G +AG+N+AR + L T S +G ++ L S Sbjct: 336 VLAGTEGYLESAATGWLAGLNAARLAQGLAPSAPPHT-SMLGGLVHYLAS 384 >gi|56551587|ref|YP_162426.1| tRNA (uracil-5-)-methyltransferase Gid [Zymomonas mobilis subsp. mobilis ZM4] gi|81170609|sp|Q5NPP5|TRMFO_ZYMMO RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|56543161|gb|AAV89315.1| gid protein [Zymomonas mobilis subsp. mobilis ZM4] Length = 446 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 52/170 (30%), Positives = 79/170 (46%), Gaps = 10/170 (5%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLEK R G +I +P L L KK + + AG Sbjct: 280 GFQTKLKYAEQIRIFRMIPGLEKAEFARLGGMHRNSFIRSPVLLDEYLRLKKQTNIRFAG 339 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLD-CICFSRTDSYIGVMIDDLTSKGVLEPYRM 426 QI G GY E+A+ GL+AGI +A ++KLD + +S +G ++ +T + Y+ Sbjct: 340 QITGCEGYIESASIGLLAGIFTA--ADKLDKKVSSPPVESALGALLGHITKNADPDHYQP 397 Query: 427 FTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRS 476 L P ++ P + + ER +K ++I E FL+S Sbjct: 398 MN----INFGLFPPISEKH--PKKQRKAMMAERARKALDQWISEEAFLKS 441 >gi|241761283|ref|ZP_04759371.1| gid protein [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241374190|gb|EER63687.1| gid protein [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 446 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 52/170 (30%), Positives = 79/170 (46%), Gaps = 10/170 (5%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLEK R G +I +P L L KK + + AG Sbjct: 280 GFQTKLKYAEQIRVFRMIPGLEKAEFARLGGMHRNSFIRSPVLLDEYLRLKKQTNIRFAG 339 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLD-CICFSRTDSYIGVMIDDLTSKGVLEPYRM 426 QI G GY E+A+ GL+AGI +A ++KLD + +S +G ++ +T + Y+ Sbjct: 340 QITGCEGYIESASIGLLAGIFTA--ADKLDRKVSSPPVESALGALLGHITKNADPDHYQP 397 Query: 427 FTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRS 476 L P ++ P + + ER +K ++I E FL+S Sbjct: 398 MN----INFGLFPPISEKH--PKKQRKAMMAERARKALDQWISEEAFLKS 441 >gi|78044952|ref|YP_360613.1| tRNA (uracil-5-)-methyltransferase Gid [Carboxydothermus hydrogenoformans Z-2901] gi|123575919|sp|Q3AB71|TRMFO_CARHZ RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|77997067|gb|ABB15966.1| glucose inhibited division protein A [Carboxydothermus hydrogenoformans Z-2901] Length = 433 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 47/126 (37%), Positives = 57/126 (45%), Gaps = 3/126 (2%) Query: 266 DIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRT 325 D +GP I D R G+ + L E L D G T L + Q++ R Sbjct: 236 DTLRFGPLKPKGIIDP--RTGKEPYAVVQLRRENLAGDYYNLVGFQTNLTWKEQNRVFRL 293 Query: 326 IPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLV 384 IPGLE IR G + +IN P L P L KK LF AGQI G GY A A G Sbjct: 294 IPGLENAEFIRFGVMHKNTFINSPALLTPYLNLKKYPRLFFAGQITGGEGYVAAIATGAW 353 Query: 385 AGINSA 390 AGI ++ Sbjct: 354 AGIAAS 359 >gi|317495292|ref|ZP_07953662.1| m(5)U-54 methyltransferase [Gemella moribillum M424] gi|316914714|gb|EFV36190.1| m(5)U-54 methyltransferase [Gemella moribillum M424] Length = 434 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 41/114 (35%), Positives = 58/114 (50%), Gaps = 6/114 (5%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + I IPGLE +I+R G Y+N P+ L T K ++ AG Sbjct: 280 GFQTHLKWGEQKRIINMIPGLENASIVRYGVMHRNTYLNSPQLLEKTYRLKDEENIYFAG 339 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM---IDDLTSK 418 Q+ G GY E+AA G+VA +N+ + + + T++ IG M I D TSK Sbjct: 340 QMTGVEGYVESAASGIVAALNALYNTEGKEVVF--PTETMIGAMANYIVDNTSK 391 Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust. Identities = 37/131 (28%), Positives = 56/131 (42%), Gaps = 25/131 (19%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGG----LG 54 +IVIG G AG EAA AK G L HKT + C+ ++ Sbjct: 5 IIVIGAGLAGSEAAWQLAKRGIKVDLYEMRPKKMTPAHKTQNFAELVCSNSLRANNITNA 64 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L E+ LD L+ + ADA + PA G DR+ + + + I + Sbjct: 65 VGLLKEEMRMLDSLIMKCADATQV----------PA--GGALAVDRDKFSEMITKTIKNH 112 Query: 115 ENLDVIQGEVA 125 N++VI+ E++ Sbjct: 113 PNINVIEEELS 123 >gi|269964324|ref|ZP_06178570.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269830940|gb|EEZ85153.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 138 Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 12/139 (8%) Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 MFTSRAEYR+ LR DNAD RLT +LG I + R RF + I+ R LKS + Sbjct: 1 MFTSRAEYRLLLREDNADLRLTEKARELGLIDDVRWARFNEKIENMETERQRLKSTWMNP 60 Query: 486 KN--------LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 + L T ++ + G+ +SY + + F+ + ++ S E+++ Sbjct: 61 NSAGIDELNKLLKTPMAREASGEDLLRRPEISYSQLTQLDAFAPALEDQQAS----EQVE 116 Query: 538 IESSYAAYTGRQMIEAKEI 556 I+ Y Y RQ E ++I Sbjct: 117 IQVKYDGYIKRQQEEIRKI 135 >gi|49475384|ref|YP_033425.1| tRNA (uracil-5-)-methyltransferase Gid [Bartonella henselae str. Houston-1] gi|81170596|sp|Q6G3Y9|TRMFO_BARHE RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|49238190|emb|CAF27400.1| Glucose inhibited division protein a [Bartonella henselae str. Houston-1] Length = 468 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 50/162 (30%), Positives = 75/162 (46%), Gaps = 12/162 (7%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE R G Y+N P L TL K+ GL AG Sbjct: 291 GFQTKLKYGEQVRIFRMIPGLENAEFARLGGLHRNTYLNSPIILDQTLRLKQRPGLRFAG 350 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 QI G GY E++A GL+AG +A + + +C C + +G +++ +T +++ Sbjct: 351 QITGCEGYVESSAIGLLAGRFAAAEYH-YNCPCLPPLTTALGALLNHITGGHIVD----- 404 Query: 428 TSRAEYRISLRPDNADNRLTPIGMKLGCIGER---RQKRFAK 466 R S +P N + L P G+R ++K+ AK Sbjct: 405 --EKTGRKSFQPMNINFGLFPPIASASYSGKRLPSKEKKLAK 444 >gi|225848138|ref|YP_002728301.1| tRNA (uracil-5-)-methyltransferase Gid [Sulfurihydrogenibium azorense Az-Fu1] gi|225644457|gb|ACN99507.1| tRNA:M(5)U-54 methyltransferase [Sulfurihydrogenibium azorense Az-Fu1] Length = 434 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 46/156 (29%), Positives = 75/156 (48%), Gaps = 5/156 (3%) Query: 270 YGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGL 329 YGP + D + G+R + L E + ++ G T L Q + R IP L Sbjct: 240 YGPMKPVGLIDP--KTGKRPFAVVQLRKENIEGTLLSLVGFQTKLKYPEQQRIFRLIPAL 297 Query: 330 EKVNIIRPGYAIEYDYINPKELF-PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGIN 388 + ++ G +I ++L PTL+ KK + AGQI G GY +AA G++AGIN Sbjct: 298 KDAEFVKLGSIHRNTFIQSQKLLLPTLQLKKNPNILFAGQITGVEGYMASAATGIIAGIN 357 Query: 389 SARKSNKLDCICFSRTDSYIGVMIDDLTS-KGVLEP 423 R + + + ++ IG +I+ +T+ K L+P Sbjct: 358 VVRILQGKEPLTVPK-ETMIGGLINYITTAKNELQP 392 >gi|268608879|ref|ZP_06142606.1| tRNA (uracil-5-)-methyltransferase Gid [Ruminococcus flavefaciens FD-1] Length = 440 Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 107/444 (24%), Positives = 164/444 (36%), Gaps = 80/444 (18%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIG----GLG 54 V VIG G AGCEAA A+ G + L HK S + C+ ++ G Sbjct: 3 VSVIGAGLAGCEAAWRLAQEGINVKLYEMKPGKYSPAHKYSGFAELVCSNSLKAARLGSA 62 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L E++ L L V K+ G DRE + A+ +I S Sbjct: 63 AGLLKYEMEMLGSLT------------VPCAKENSVEAGGALAVDREKFSDAVTAKIKSH 110 Query: 115 ENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRM 174 ++VI EV + I TV++ TG G + A R+ Sbjct: 111 PLIEVIGEEV------------------TEIPDGTVIIATGPLTSGAM--------AERI 144 Query: 175 GDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIW-DKTEKQFADERLIP------FS 227 + L F T LD + + + + + AD P + Sbjct: 145 KELCGEGL-------SFYDAAAPIVTYESLDKEKVFYASRYGRGEADYVNCPMNKEEYLA 197 Query: 228 FMTDKITNRQIECGITRTNLETHRI-IMEN---IKHSAIYSGDIKSYGPRYCPSIEDKIV 283 F I+ +++ + ETH + E I+ A D +GP I+D Sbjct: 198 FYEALISAEKVQL----KDFETHPFSVYEGCMPIEELARRGVDTMRFGPMKPVGIDDP-- 251 Query: 284 RFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEY 343 R G R + L E + G T L Q + I GLE +R G Sbjct: 252 RTGRRPYAVVQLRRENSEGTLFNLVGFQTNLKFGEQKRVFSMITGLENAEFMRYGVMHRN 311 Query: 344 DYINPKELFPT-LETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFS 402 +IN EL + ++ ++ AGQI G GY E+AA G++AG +ARK L+ + Sbjct: 312 TFINSPELLNSDFSMRQHPEIYFAGQITGVEGYMESAASGIIAGTAAARKLKGLEPVVLP 371 Query: 403 RTDSYIGVM---IDDLTSKGVLEP 423 +++ G + I D + G +P Sbjct: 372 -SETMTGALSAYISDSFNSGKFQP 394 >gi|326204630|ref|ZP_08194486.1| gid protein [Clostridium papyrosolvens DSM 2782] gi|325985197|gb|EGD46037.1| gid protein [Clostridium papyrosolvens DSM 2782] Length = 436 Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 36/94 (38%), Positives = 45/94 (47%), Gaps = 1/94 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE +R G YIN PK L T K ++ AG Sbjct: 279 GFQTHLKWPEQKRVFSLIPGLENAEFVRYGVMHRNTYINSPKLLDNTYRLKNNENMYFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICF 401 QI G GY E+ + G VAGIN+A + + I F Sbjct: 339 QITGVEGYIESTSSGFVAGINAAAQCRGGERIVF 372 Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 54/130 (41%), Gaps = 25/130 (19%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGL----G 54 V VIG G AGCEAA AK G + L H ++ + C+ ++ Sbjct: 5 VNVIGAGLAGCEAAYQLAKRGINVTLYEMKPEKSSPAHHSNDFAELVCSNSLRSAQLENA 64 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L E+ +D L+ R AD + PA G DRE + + +EI Sbjct: 65 VGLLKEELRTMDSLIMRAADETRV----------PA--GGALAVDREGFSQYITKEIKEN 112 Query: 115 ENLDVIQGEV 124 N++++ E+ Sbjct: 113 SNIEIVNKEM 122 >gi|304436894|ref|ZP_07396858.1| tRNA:M(5)U-54 methyltransferase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304370093|gb|EFM23754.1| tRNA:M(5)U-54 methyltransferase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 440 Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 57/127 (44%), Gaps = 3/127 (2%) Query: 266 DIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRT 325 D YGP +E + GER + L + + G T L Q + + Sbjct: 239 DTLLYGPLKPVGLEHPVT--GERPYAVVQLRQDNAAGSIYNIVGFQTHLKWPEQRRVFQM 296 Query: 326 IPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLV 384 IPGL +R G +I+ P+ L PT + L AGQ+ G GY E+AA GLV Sbjct: 297 IPGLAAAEFLRYGVMHRNSFISAPRHLRPTFQYTGDDRLLFAGQMTGVEGYVESAASGLV 356 Query: 385 AGINSAR 391 AG N+AR Sbjct: 357 AGKNAAR 363 >gi|332703455|ref|ZP_08423543.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO [Desulfovibrio africanus str. Walvis Bay] gi|332553604|gb|EGJ50648.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO [Desulfovibrio africanus str. Walvis Bay] Length = 443 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 97/433 (22%), Positives = 158/433 (36%), Gaps = 68/433 (15%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGLGKGHL 58 + +IGGG AGCE A A+ G L H+ + + C+ ++ Sbjct: 4 IAIIGGGLAGCECAWRLAQAGIPVRLFEMKPIRRSPAHQEDGLAELVCSNSL------RS 57 Query: 59 VREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLD 118 E A+ L + A + V + PA G DR L+ M R+I S ++ Sbjct: 58 EDEASAIGELKVEMRMAGSLVMEVAEATRVPA--GKALAVDRRLFSDYMTRKIESNPLIE 115 Query: 119 VIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSP 178 V++ EV + S ++ D VV+ G + Sbjct: 116 VVRAEVESLD-------SPLLAD-----ADRVVVAAGPLV-------------------- 143 Query: 179 SNSLFNSFMKFDFDTGRL------KTGTPARLDGKTIIWDKTEKQFADERL-IPF----- 226 S+SL +S + D G T +D + W + D+ L P Sbjct: 144 SDSLASSLAQALGDKGLYFYDAIAPIVTAESVDMEHAFWGSRYRPEDDDYLNCPLTEEEY 203 Query: 227 -SFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRF 285 +F+ + + + C ++ + I+ A ++GP ++D R Sbjct: 204 KAFVRELLAAETVPCREFEEHMHFEGCL--PIEEMAARGEMTLAFGPMKPVGLDDP--RT 259 Query: 286 GERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDY 345 G R + L E G T L Q + IPGL +R G + Sbjct: 260 GRRPYAVLQLRAENRERTTFNLVGFQTKLKYPEQKRVFALIPGLRNAEYVRLGSIHRNTF 319 Query: 346 IN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 +N P L LE K G+ LAGQI G GY E+AA GL G+ A K+ + + F Sbjct: 320 VNAPVVLTDELELKARPGVHLAGQITGVEGYLESAACGLWVGMLLAAKA-RGQSLGFPPR 378 Query: 405 DSYIGVMIDDLTS 417 ++ +G ++ L + Sbjct: 379 ETALGALLSHLRT 391 >gi|313605983|gb|EFR83129.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [Listeria monocytogenes FSL F2-208] Length = 83 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 50/77 (64%) Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y + ++ +++K E + IP++ DY ++ L+ E EKL ++P ++ QAS+I G+ Sbjct: 2 YEGYIQKSNLQVEKMKRMEDKKIPENIDYDAISGLATEALEKLKKIEPLSIAQASRISGV 61 Query: 602 TPAALNLLLIYIKKNTV 618 PA +++LL+YI++ + Sbjct: 62 NPADISILLVYIEQGKI 78 >gi|163783045|ref|ZP_02178040.1| glucose-inhibited division protein A [Hydrogenivirga sp. 128-5-R1-1] gi|159881725|gb|EDP75234.1| glucose-inhibited division protein A [Hydrogenivirga sp. 128-5-R1-1] Length = 437 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 13/144 (9%) Query: 282 IVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAI 341 +V+ + N L G T + YP Q + R IP L +R G Sbjct: 262 VVQLRKENAEGTLLSLVGFQTKLTYPE----------QKRVFRLIPALRNAVFVRLGSMH 311 Query: 342 EYDYINP-KELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCIC 400 +I + L P L +K+ +F AGQI G GY ++A G++AGIN+ R + + + Sbjct: 312 RNTFIQSNRVLTPFLNMRKMENIFFAGQITGVEGYVASSATGILAGINAGRLAEGKELVV 371 Query: 401 FSRTDSYIGVMIDDLTSK-GVLEP 423 ++ +G ++ +T K G L+P Sbjct: 372 -PPAETMLGSLVRYVTGKEGELQP 394 Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 49/122 (40%), Gaps = 25/122 (20%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGG----LG 54 +IVIGGG AG E+A A G L HKT + + C+ +GG G Sbjct: 5 IIVIGGGLAGVESAWRLANEGHKVILYEMRPQKQTPAHKTDKLAELVCSNTLGGTELTTG 64 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L E+ L+ L+ A A + PA G DRE++ + R I Sbjct: 65 AGLLKAEMSLLNSLVIEAAKEARV----------PA--GGALGVDREIFASYITRRIEGH 112 Query: 115 EN 116 N Sbjct: 113 HN 114 >gi|225873465|ref|YP_002754924.1| gid protein [Acidobacterium capsulatum ATCC 51196] gi|225792361|gb|ACO32451.1| gid protein [Acidobacterium capsulatum ATCC 51196] Length = 442 Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 96/412 (23%), Positives = 147/412 (35%), Gaps = 93/412 (22%) Query: 10 VIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGLGKGH--- 57 VIGGG AG EAA +AA++GA L H+T+ G + C+ ++ + Sbjct: 7 VIGGGLAGPEAALMAARMGADVDLYEMRPVRQTPAHQTADFGELVCSNSLKSESENTAPW 66 Query: 58 -LVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQEN 116 L +E+ + + ADAA + PA G DRE + + I ++ Sbjct: 67 LLKQEMRRAGSPLLQCADAAAV----------PA--GHALAVDREEFSRRITAAIAAEPR 114 Query: 117 LDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGD 176 + V + EV + E + VL +G L R+ Sbjct: 115 ITVHREEVTELDPEGPV----------------TVLASGPLTSSA-----LSEEIARLTG 153 Query: 177 SPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR 236 + ++S +D ++I D+ + F+ DK T Sbjct: 154 QEHLAFYDSISPI--------------VDAESIDMDR----------VYFAARWDKGTAD 189 Query: 237 QIECGITRTN-------LETHRIIMEN-------------IKHSAIYSGDIKSYGPRYCP 276 I C + R L + + E I+ A D +GP Sbjct: 190 YINCPMNREEYDRFYDALVSAETVKEKDWEKLDYFEGCLPIEELARRGRDTLRFGPMKPV 249 Query: 277 SIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIR 336 + D R G+ + L E L D G L Q + +R IPGLE +R Sbjct: 250 GLRDP--RTGQTPWAVVQLRCENLRADSYNLVGFQNHLKYGEQARILRMIPGLENAKFLR 307 Query: 337 PGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGI 387 G YI P L L K +F+AGQ++G GY E+ GL+AGI Sbjct: 308 YGQIHRNTYIQAPAVLAGRLHFKAHPRVFVAGQLSGVEGYTESMGMGLLAGI 359 >gi|88808751|ref|ZP_01124261.1| glucose-inhibited division protein A [Synechococcus sp. WH 7805] gi|88787739|gb|EAR18896.1| glucose-inhibited division protein A [Synechococcus sp. WH 7805] Length = 458 Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 3/146 (2%) Query: 267 IKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTI 326 I + PR+ + D+ VR +R + L E + + G T L Q + ++ I Sbjct: 252 IGLWDPRWG-DVNDRDVRRAKRAYAVVQLRQEDKDGRLWNLVGFQTNLKWGEQKRVLQMI 310 Query: 327 PGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVA 385 PGLE+ +R G ++ P L TL+ + L AGQI GT GY A A G +A Sbjct: 311 PGLEQAEFVRFGVMHRNTFLEAPALLDATLQFRSRPTLLAAGQITGTEGYAAAVAGGWLA 370 Query: 386 GINSARKSNKLDCICFSRTDSYIGVM 411 G N+AR I RT + +G + Sbjct: 371 GTNAARLVQGEHPIDLPRT-TMVGAL 395 >gi|297568410|ref|YP_003689754.1| gid protein [Desulfurivibrio alkaliphilus AHT2] gi|296924325|gb|ADH85135.1| gid protein [Desulfurivibrio alkaliphilus AHT2] Length = 445 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 36/94 (38%), Positives = 53/94 (56%), Gaps = 4/94 (4%) Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLE 356 EG+ ++V G T L Q + R IPGLE+ R G ++ P+ L +L+ Sbjct: 278 EGMLYNLV---GFQTKLSHAGQKEVFRQIPGLEQAQFARLGSIHRNTFVCAPRVLQASLQ 334 Query: 357 TKKISGLFLAGQINGTTGYEEAAAQGLVAGINSA 390 + + + LAGQI+G GY E+AA GL+AGIN+A Sbjct: 335 LQARADILLAGQISGVEGYVESAAGGLLAGINAA 368 >gi|94984591|ref|YP_603955.1| tRNA (uracil-5-)-methyltransferase Gid [Deinococcus geothermalis DSM 11300] gi|122986705|sp|Q1J148|TRMFO_DEIGD RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|94554872|gb|ABF44786.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Deinococcus geothermalis DSM 11300] Length = 458 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE I+R G Y+N P+ L TL+ + F+AG Sbjct: 280 GFQTGLKWGDQKVVVNLIPGLENAEIVRYGVMHRNTYLNAPEVLDATLQLRADPQKFVAG 339 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 + GT GY E+AA G +AG N+AR + L + +S +G ++ L S Sbjct: 340 VLAGTEGYLESAATGWLAGTNAARLARGLTPLT-PPPESMLGGLVRYLAS 388 >gi|189426314|ref|YP_001953491.1| tRNA (uracil-5-)-methyltransferase Gid [Geobacter lovleyi SZ] gi|189422573|gb|ACD96971.1| gid protein [Geobacter lovleyi SZ] Length = 443 Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 37/137 (27%), Positives = 60/137 (43%), Gaps = 12/137 (8%) Query: 282 IVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAI 341 +V+ N + G T + +P Q + +R IPGLE+ +R G Sbjct: 262 VVQLRSENNEKTLYNLVGFQTKMTWPE----------QRRVLRMIPGLEQAEFVRLGVMH 311 Query: 342 EYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCIC 400 +IN P L PT + K + AGQI G GY E+A G +AG+ A + + Sbjct: 312 RNTFINAPALLLPTQQLKSDPRIIFAGQITGVEGYVESAGSGFLAGLTVAALVTHEEPV- 370 Query: 401 FSRTDSYIGVMIDDLTS 417 ++ +G +I +T+ Sbjct: 371 LPPQETALGALIHHITN 387 Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust. Identities = 35/140 (25%), Positives = 59/140 (42%), Gaps = 25/140 (17%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGLGKGHL 58 V +IG G AGCEAA AA+ G L H+ + + C+ ++ G G+ Sbjct: 5 VTIIGAGLAGCEAAWQAAERGLQVRLYEMKPHRYSPAHQCEGLAELVCSNSLRGADLGNA 64 Query: 59 V----REIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 V E+ L+ + ADA + PA G DR+L+ + I S Sbjct: 65 VGLLKEELRRCGSLIMQAADATRV----------PA--GGALAVDRDLFSAWITERISSH 112 Query: 115 ENLDVIQGEVAGFNTEKNII 134 N+ +++ E+ +E ++ Sbjct: 113 PNITLVREELTCLPSEGLVV 132 >gi|260752816|ref|YP_003225709.1| tRNA (uracil-5-)-methyltransferase Gid [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258552179|gb|ACV75125.1| gid protein [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 446 Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 51/170 (30%), Positives = 79/170 (46%), Gaps = 10/170 (5%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLEK R G +I +P L L KK + + AG Sbjct: 280 GFQTKLKYAEQIRIFRMIPGLEKAEFARLGGMHRNSFIRSPVLLDEYLRLKKQTNIRFAG 339 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLD-CICFSRTDSYIGVMIDDLTSKGVLEPYRM 426 QI G GY E+A+ GL+AGI +A ++KLD + +S +G ++ +T + Y+ Sbjct: 340 QITGCEGYIESASIGLLAGIFTA--ADKLDRKVSSPPVESALGALLGHITKNADPDHYQP 397 Query: 427 FTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRS 476 L P ++ P + + ER +K ++I E FL++ Sbjct: 398 MN----INFGLFPPISEKH--PKKQRKAMMAERARKALDQWISEEAFLKN 441 >gi|116619487|ref|YP_821643.1| tRNA (uracil-5-)-methyltransferase Gid [Candidatus Solibacter usitatus Ellin6076] gi|122255955|sp|Q02C58|TRMFO_SOLUE RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|116222649|gb|ABJ81358.1| gid protein [Candidatus Solibacter usitatus Ellin6076] Length = 445 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 41/126 (32%), Positives = 58/126 (46%), Gaps = 3/126 (2%) Query: 266 DIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRT 325 D +GP ++D R G R + L E L + G + Q + +R Sbjct: 242 DTLRFGPMKPMGLDDP--RTGRRPWAVVQLRQENLRAESFNLVGFQNHMKFPEQKRVLRL 299 Query: 326 IPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLV 384 IPGL+ +R G YIN P L L + +F AGQI+G GY E+ A GL+ Sbjct: 300 IPGLQNAEFLRYGQIHRNTYINAPALLTAALNLRARPEIFFAGQISGVEGYVESIATGLM 359 Query: 385 AGINSA 390 AGI++A Sbjct: 360 AGIHAA 365 >gi|253573512|ref|ZP_04850855.1| tRNA:m(5)U-54 methyltransferase [Paenibacillus sp. oral taxon 786 str. D14] gi|251847040|gb|EES75045.1| tRNA:m(5)U-54 methyltransferase [Paenibacillus sp. oral taxon 786 str. D14] Length = 440 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 44/110 (40%), Positives = 58/110 (52%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE +R G +IN PK L PT + K LF AG Sbjct: 281 GFQTHLKWGEQKRVFSMIPGLENAEFVRYGVMHRNTFINSPKLLMPTYQLKARPSLFFAG 340 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ G GY E+AA GL+AGIN+AR + + I F D+ +G M +T+ Sbjct: 341 QMTGVEGYVESAASGLIAGINAARAAAGQEGIVFP-ADTTLGSMARYITT 389 >gi|303249333|ref|ZP_07335563.1| gid protein [Desulfovibrio fructosovorans JJ] gi|302489265|gb|EFL49225.1| gid protein [Desulfovibrio fructosovorans JJ] Length = 439 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 88/391 (22%), Positives = 148/391 (37%), Gaps = 39/391 (9%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALD 66 + +IGGG AGCE A A+ G ++ + K + +P + L + +R + + Sbjct: 2 SIAIIGGGLAGCECALALARAGVASTIFECKPAHFSPAHVSPGLAELVCSNSLRSDEPVT 61 Query: 67 GLMGRVADAAGIQFRVLNVKKGPAVRGPRTQA-DRELYRLAMQREILSQENLDVIQGEVA 125 + + A + V+ + AV + A DRE + AM I EN ++ Sbjct: 62 AVGLLKVEMATLGSAVIEAARETAVPAGKALAVDREKFSAAMTARI---ENEPLVT---- 114 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 T + I+S + D ++ TVV+ G + R+ S ++ Sbjct: 115 --LTRREIMS---LSDPALTGFETVVVAAG------------PLATDRLATSLCETIGQE 157 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWD-KTEKQFADERLIPF------SFMTDKITNRQI 238 + F + T +D + W + ++ D P +F+ + + R++ Sbjct: 158 SLYFYDAIAPIVTTE--SVDMEQAFWQSRWQEGEGDYCNCPLDEAQYKAFVAELVAARKV 215 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 E H I+ A ++GP + D + G R + L PE Sbjct: 216 PS--REFEKELHFEGCLPIEAMAERGERTLAFGPMKPIGLTDP--KTGRRPYAVVQLRPE 271 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLET 357 + + G T L Q + R IP L R G ++N P+ L LE Sbjct: 272 NVAKSTLNLVGFQTKLVYGEQERIFRMIPALHAAEFTRLGSIHRNTFVNAPRVLNDRLEL 331 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGIN 388 G +LAGQI G GY E+AA GL G+ Sbjct: 332 LARPGTYLAGQITGVEGYVESAACGLWLGVQ 362 >gi|110634143|ref|YP_674351.1| tRNA (uracil-5-)-methyltransferase Gid [Mesorhizobium sp. BNC1] gi|110285127|gb|ABG63186.1| gid protein [Chelativorans sp. BNC1] Length = 493 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 97/406 (23%), Positives = 152/406 (37%), Gaps = 71/406 (17%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGLGKGHL 58 + VIGGG AG EAA AA+ G L HKT + + C+ + Sbjct: 31 IHVIGGGLAGSEAAWQAAEAGVPVILHEMRPVRGTDAHKTDGLAELVCSNSF-------- 82 Query: 59 VREIDALDGLMGRVAD----AAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 R DA +G + A + R + + PA G DR+ + A+ + I Sbjct: 83 -RSDDAQTNAVGLLHAEMRLAGSLIMRAGDANQVPA--GGALAVDRDGFSDAVTQAIHGH 139 Query: 115 ENLDVIQGEVAGF---NTEKNIISSIVMQDNSM---IRCSTVVLTTGTF--LRGVIHIGK 166 + V++ EVAG ++ II++ + S+ IR T F + ++H Sbjct: 140 PLITVVREEVAGLPPSEWDQTIIATGPLTAPSLAEAIRQETGAEALAFFDAIAPIVHFDT 199 Query: 167 LKIPA----GRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADER 222 + + R + ++ + + + A LDG+ + + E + Sbjct: 200 IDMDTCWFQSRYDKAGPGGTGKDYINCPMNKEQYQAFVQALLDGEKTAFKEWEGTPYFDG 259 Query: 223 LIPFSFMTDKITNRQIECGITRTNLETHRI-IMENIKHSAIYSGDIKSYGPRYCPSIEDK 281 +P M ++ ET R M+ + + + D K+Y Sbjct: 260 CLPIEVMAER-------------GPETLRHGPMKPMGLTNAHKPDEKAYA---------- 296 Query: 282 IVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAI 341 +V+ + N G T + Y Q + R IPGLE R G Sbjct: 297 VVQLRQDNALGTLYNMVGFQTKLKYAE----------QVRIFRMIPGLENAEFARLGGLH 346 Query: 342 EYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAG 386 YIN P L TL+ K GL AGQI G GY E+AA GL+AG Sbjct: 347 RNTYINSPALLDITLQLKSRPGLRFAGQITGCEGYVESAAMGLMAG 392 >gi|148239718|ref|YP_001225105.1| tRNA (uracil-5-)-methyltransferase Gid [Synechococcus sp. WH 7803] gi|205830342|sp|A5GLJ3|TRMFO_SYNPW RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|147848257|emb|CAK23808.1| Protein gid homolog [Synechococcus sp. WH 7803] Length = 451 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 41/126 (32%), Positives = 59/126 (46%), Gaps = 2/126 (1%) Query: 267 IKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTI 326 I + PR+ + D+ VR +R + L E + + G T L Q + ++ I Sbjct: 245 IGLWDPRWG-DVNDRDVRRAKRAYAVVQLRQEDKDGRLWNLVGFQTNLKWGEQKRVLQMI 303 Query: 327 PGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVA 385 PGLE +R G ++ P L TL+ + L AGQI GT GY A A G +A Sbjct: 304 PGLEGAEFVRFGVMHRNTFLEAPALLDATLQFRSRPNLLAAGQITGTEGYAAAVAGGWLA 363 Query: 386 GINSAR 391 G N+AR Sbjct: 364 GTNAAR 369 >gi|209549101|ref|YP_002281018.1| tRNA (uracil-5-)-methyltransferase Gid [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534857|gb|ACI54792.1| gid protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 477 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 46/141 (32%), Positives = 64/141 (45%), Gaps = 8/141 (5%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE R G YIN P L P+L K GL AG Sbjct: 293 GFQTKLKYGAQAEIFRMIPGLENAEFARLGGLHRNTYINSPTLLDPSLTLKSRPGLRFAG 352 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 QI G GY E+A+ GL+AG +A + K + I + +G ++ +T ++ Sbjct: 353 QITGCEGYVESASVGLMAGRFAAAE-RKGEAISLPPATTALGSLLGHITGGHIV------ 405 Query: 428 TSRAEYRISLRPDNADNRLTP 448 T + S +P N + L P Sbjct: 406 TDEEPGKRSFQPMNINFGLFP 426 >gi|110004406|emb|CAK98744.1| hypothetical glucose inhibited protein gid n-terminal truncated [Spiroplasma citri] Length = 149 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 4/103 (3%) Query: 326 IPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLV 384 IPGL V I+R G + ++IN P L L+ KK +F AGQI GY E+AA G++ Sbjct: 2 IPGLANVQIVRYGVIHKNNFINSPILLNQFLQVKKHHNIFFAGQIMDVEGYVESAATGII 61 Query: 385 AGINSARKSNKLDCICFSRTDSYIGVMIDDLT--SKGVLEPYR 425 + +N R NK + F ++ +G +++ + SK +P + Sbjct: 62 SALNITRFLNKKSMLTFP-PETMMGALVNYIVNASKTNFQPMK 103 >gi|86357464|ref|YP_469356.1| tRNA (uracil-5-)-methyltransferase Gid [Rhizobium etli CFN 42] gi|123512154|sp|Q2K957|TRMFO_RHIEC RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|86281566|gb|ABC90629.1| glucose inhibited division protein A [Rhizobium etli CFN 42] Length = 477 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 40/114 (35%), Positives = 53/114 (46%), Gaps = 2/114 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE R G YIN P L P+L K GL AG Sbjct: 293 GFQTKLKYGAQAEIFRMIPGLENAEFARLGGLHRNTYINSPTLLDPSLTLKSRPGLRFAG 352 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 QI G GY E+A+ GL+AG A K + I + +G ++ +T ++ Sbjct: 353 QITGCEGYVESASVGLMAG-RFAAAERKGEAISLPPATTALGSLLGHITGGHIV 405 >gi|50365349|ref|YP_053774.1| tRNA (uracil-5-)-methyltransferase Gid [Mesoplasma florum L1] gi|81827281|sp|Q6F0T3|TMFO2_MESFL RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO 2; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase 2; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase 2 gi|50363905|gb|AAT75890.1| glucose inhibited division protein C [Mesoplasma florum L1] Length = 446 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 49/106 (46%), Gaps = 1/106 (0%) Query: 286 GERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDY 345 G RN + L + N + G T L Q + IPGLE +R G + ++ Sbjct: 259 GTRNHAVVQLRQDDANDRLYNIVGFQTNLKWPEQKRIFSMIPGLENAKFVRYGVMHKNNF 318 Query: 346 IN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSA 390 IN PK L L+ K +F AGQI G GY E+ GL+ IN A Sbjct: 319 INSPKVLNKYLQLKTNENIFFAGQITGVEGYVESCVSGLITAINIA 364 Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust. Identities = 46/164 (28%), Positives = 66/164 (40%), Gaps = 26/164 (15%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALITHKTST---------IGSMSCNPAIGGL----G 54 V +IG G AG EAA AK L K T + C+ ++ Sbjct: 6 VNIIGAGLAGTEAAYQLAKRNIKVKLFEVKRITKNPVQVLDGFAELVCSNSLRSNELTNA 65 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L E+ LD L+ R A+ A + PA G DR L+ + +EI S Sbjct: 66 VGTLKEEMRLLDSLIIRAAEYAQV----------PA--GGSLAVDRVLFSEYITKEISSN 113 Query: 115 ENLDVIQGEVAGFN-TEKNIISSIVMQDNSMIRCSTVVLTTGTF 157 EN++VI EV N E +I+S + N + T ++ F Sbjct: 114 ENIEVIDLEVENINPNELTLIASGPLTTNKLQEQITKLIGNDDF 157 >gi|37523172|ref|NP_926549.1| tRNA (uracil-5-)-methyltransferase Gid [Gloeobacter violaceus PCC 7421] gi|35214175|dbj|BAC91544.1| glucose-inhibited division protein [Gloeobacter violaceus PCC 7421] Length = 490 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 2/106 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE+ +R G ++ +P L PTL+ L G Sbjct: 322 GFQTNLKWGEQKRVFQMIPGLEQAEFVRLGVMHRNTFLCSPHLLAPTLQFHAHPRLLACG 381 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMID 413 Q+ GT GY A A G +AG N+AR + D + ++ G ++D Sbjct: 382 QLTGTEGYTAAVAGGWLAGTNAARLAQSRDPLVLP-VETMAGALVD 426 >gi|323341689|ref|ZP_08081922.1| tRNA:M(5)U-54 methyltransferase [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464114|gb|EFY09307.1| tRNA:M(5)U-54 methyltransferase [Erysipelothrix rhusiopathiae ATCC 19414] Length = 445 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 34/84 (40%), Positives = 46/84 (54%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + I+ IPGLE I+R G +I +P L ++K LF AG Sbjct: 295 GFQTRLKWGDQKRIIQMIPGLENAVIVRYGVMHRNTFIKSPLLLNHHYQSKTQPSLFFAG 354 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q++G GY E+AA GLVA +N A+ Sbjct: 355 QVSGVEGYVESAASGLVAALNMAQ 378 >gi|188997018|ref|YP_001931269.1| gid protein [Sulfurihydrogenibium sp. YO3AOP1] gi|254789184|sp|B2V9U2|TRMFO_SULSY RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|188932085|gb|ACD66715.1| gid protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 438 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 46/156 (29%), Positives = 75/156 (48%), Gaps = 5/156 (3%) Query: 270 YGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGL 329 YGP + D + G+R + L E + ++ G T L Q + IP L Sbjct: 240 YGPMKPVGLIDP--KTGKRPYAVVQLRKENIEGTLLSLVGFQTKLKYPEQKRIFSLIPAL 297 Query: 330 EKVNIIRPGYAIEYDYINPKELF-PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGIN 388 + ++ G +I ++L PTL+ +K + AGQI G GY +AA G++AGIN Sbjct: 298 KDAEFVKLGSIHRNTFIQSQKLLKPTLQLRKKPNILFAGQITGVEGYMASAATGIIAGIN 357 Query: 389 SARKSNKLDCICFSRTDSYIGVMIDDLTS-KGVLEP 423 AR + + +T + IG +I+ +T+ K L+P Sbjct: 358 VARMLEGKEPVVPPKT-TMIGGLINYITTAKNELQP 392 >gi|218662138|ref|ZP_03518068.1| tRNA (uracil-5-)-methyltransferase Gid [Rhizobium etli IE4771] Length = 302 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 40/114 (35%), Positives = 53/114 (46%), Gaps = 2/114 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE R G YIN P L P+L K GL AG Sbjct: 116 GFQTKLKYGAQAEIFRMIPGLENAEFARLGGLHRNTYINSPTLLDPSLTLKSRPGLRFAG 175 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 QI G GY E+A+ GL+AG A K + I + +G ++ +T ++ Sbjct: 176 QITGCEGYVESASVGLMAG-RFAAAERKGEAILLPPATTALGSLLGHITGGHIV 228 >gi|205830474|sp|Q7NFC3|TRMFO_GLOVI RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase Length = 449 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 2/106 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE+ +R G ++ +P L PTL+ L G Sbjct: 281 GFQTNLKWGEQKRVFQMIPGLEQAEFVRLGVMHRNTFLCSPHLLAPTLQFHAHPRLLACG 340 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMID 413 Q+ GT GY A A G +AG N+AR + D + ++ G ++D Sbjct: 341 QLTGTEGYTAAVAGGWLAGTNAARLAQSRDPLVLP-VETMAGALVD 385 >gi|205830467|sp|Q11HD9|TRMFO_MESSB RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase Length = 468 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 97/406 (23%), Positives = 152/406 (37%), Gaps = 71/406 (17%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGLGKGHL 58 + VIGGG AG EAA AA+ G L HKT + + C+ + Sbjct: 6 IHVIGGGLAGSEAAWQAAEAGVPVILHEMRPVRGTDAHKTDGLAELVCS---------NS 56 Query: 59 VREIDALDGLMGRVAD----AAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 R DA +G + A + R + + PA G DR+ + A+ + I Sbjct: 57 FRSDDAQTNAVGLLHAEMRLAGSLIMRAGDANQVPA--GGALAVDRDGFSDAVTQAIHGH 114 Query: 115 ENLDVIQGEVAGF---NTEKNIISSIVMQDNSM---IRCSTVVLTTGTF--LRGVIHIGK 166 + V++ EVAG ++ II++ + S+ IR T F + ++H Sbjct: 115 PLITVVREEVAGLPPSEWDQTIIATGPLTAPSLAEAIRQETGAEALAFFDAIAPIVHFDT 174 Query: 167 LKIPA----GRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADER 222 + + R + ++ + + + A LDG+ + + E + Sbjct: 175 IDMDTCWFQSRYDKAGPGGTGKDYINCPMNKEQYQAFVQALLDGEKTAFKEWEGTPYFDG 234 Query: 223 LIPFSFMTDKITNRQIECGITRTNLETHRI-IMENIKHSAIYSGDIKSYGPRYCPSIEDK 281 +P M ++ ET R M+ + + + D K+Y Sbjct: 235 CLPIEVMAER-------------GPETLRHGPMKPMGLTNAHKPDEKAYA---------- 271 Query: 282 IVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAI 341 +V+ + N G T + Y Q + R IPGLE R G Sbjct: 272 VVQLRQDNALGTLYNMVGFQTKLKYAE----------QVRIFRMIPGLENAEFARLGGLH 321 Query: 342 EYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAG 386 YIN P L TL+ K GL AGQI G GY E+AA GL+AG Sbjct: 322 RNTYINSPALLDITLQLKSRPGLRFAGQITGCEGYVESAAMGLMAG 367 >gi|218510625|ref|ZP_03508503.1| tRNA (uracil-5-)-methyltransferase Gid [Rhizobium etli Brasil 5] Length = 263 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 46/141 (32%), Positives = 61/141 (43%), Gaps = 8/141 (5%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q R IPGLE R G YIN P L P+L K GL AG Sbjct: 77 GFQTKLKYGAQADIFRMIPGLESAEFARLGGLHRNTYINSPTLLDPSLTLKSRPGLRFAG 136 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 QI G GY E+A+ GL+AG A K + I + +G ++ +T ++ Sbjct: 137 QITGCEGYVESASVGLMAG-RFAAAERKGEAILLPPATTALGSLLGHITGGHIV------ 189 Query: 428 TSRAEYRISLRPDNADNRLTP 448 T + S +P N + L P Sbjct: 190 TDEEPGKRSFQPMNINFGLFP 210 >gi|288573041|ref|ZP_06391398.1| gid protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288568782|gb|EFC90339.1| gid protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 447 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 55/183 (30%), Positives = 83/183 (45%), Gaps = 12/183 (6%) Query: 266 DIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRT 325 D +GP +E + GER + L + + V G T L Q + R Sbjct: 240 DTLCFGPLRPVGLEHPVT--GERFFAVVQLRQDNRDGSVYNIVGFQTNLKWGEQDRVFRL 297 Query: 326 IPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKK-ISGLFLAGQINGTTGYEEAAAQGL 383 IPGLE V +R G Y+N PK L L + ++LAGQI+G GY E+ A G+ Sbjct: 298 IPGLENVEFVRKGVMHRNIYVNAPKVLDGHLRFRGGAEDIYLAGQISGVEGYVESVAMGM 357 Query: 384 VAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV--LEPYR----MFTSRAEYRISL 437 VA +N +L + ++ IG +++ L+ V +P +F S E RI L Sbjct: 358 VAALNLLSSDMELPLPEWP-VETAIGALLNRLSDDTVKRFQPTNVNLGIFPSLGE-RIKL 415 Query: 438 RPD 440 +P+ Sbjct: 416 KPE 418 Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 13/83 (15%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGG--- 52 S + V+G G AG EAA A+ G + L+ HKT + C+ ++GG Sbjct: 3 SKRITVVGAGLAGSEAAWQIAERGVNVTLVEMRPKVSSPAHKTDLFAELVCSNSLGGDTE 62 Query: 53 -LGKGHLVREIDALDGLMGRVAD 74 G L E+ AL L+ +VAD Sbjct: 63 TTPAGILKSELRALGSLIMKVAD 85 >gi|116251819|ref|YP_767657.1| tRNA (uracil-5-)-methyltransferase Gid [Rhizobium leguminosarum bv. viciae 3841] gi|205830322|sp|Q1MHL2|TRMFO_RHIL3 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|115256467|emb|CAK07551.1| putative glucose inhibited division protein A [Rhizobium leguminosarum bv. viciae 3841] Length = 477 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 46/141 (32%), Positives = 60/141 (42%), Gaps = 8/141 (5%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q R IPGLE R G YIN P L P+L K GL AG Sbjct: 293 GFQTKLKYGAQADIFRMIPGLENAEFARLGGLHRNTYINSPTLLDPSLTLKSRPGLRFAG 352 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 QI G GY E+A+ GL+AG A K + I + +G ++ +T + Sbjct: 353 QITGCEGYVESASVGLMAG-RFAAAERKGEAISLPPATTALGSLLGHITGG------HLV 405 Query: 428 TSRAEYRISLRPDNADNRLTP 448 T + S +P N + L P Sbjct: 406 TDEEPGKRSFQPMNINFGLFP 426 >gi|241204428|ref|YP_002975524.1| tRNA (uracil-5-)-methyltransferase Gid [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858318|gb|ACS55985.1| gid protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 477 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 46/141 (32%), Positives = 62/141 (43%), Gaps = 8/141 (5%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q R IPGLE R G YIN P L P+L K GL AG Sbjct: 293 GFQTKLKYGAQADIFRMIPGLENAEFARLGGLHRNTYINSPTLLDPSLTLKSRPGLRFAG 352 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 QI G GY E+A+ GL+AG +A + K + I + +G ++ +T + Sbjct: 353 QITGCEGYVESASVGLLAGRFAAAE-RKGEAISLPPATTALGSLLGHITGG------HLV 405 Query: 428 TSRAEYRISLRPDNADNRLTP 448 T + S +P N + L P Sbjct: 406 TDEEPGKRSFQPMNINFGLFP 426 >gi|218459055|ref|ZP_03499146.1| tRNA (uracil-5-)-methyltransferase Gid [Rhizobium etli Kim 5] Length = 319 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 40/114 (35%), Positives = 53/114 (46%), Gaps = 2/114 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE R G YIN P L P+L K GL AG Sbjct: 202 GFQTKLKYGAQAEIFRMIPGLENAEFARLGGLHRNTYINSPTLLDPSLTLKSRPGLRFAG 261 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 QI G GY E+A+ GL+AG A K + I + +G ++ +T ++ Sbjct: 262 QITGCEGYVESASVGLMAG-RFAAAERKGEAILLPPATTALGSLLGHITGGHIV 314 >gi|319783207|ref|YP_004142683.1| gid protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169095|gb|ADV12633.1| gid protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 469 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 36/79 (45%), Positives = 42/79 (53%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + RTIPGLE + R G YIN P L +L+ K GL AG Sbjct: 289 GFQTKLKHAEQVRIFRTIPGLENADFARLGGLHRNTYINSPTLLDASLQLKSRPGLRFAG 348 Query: 368 QINGTTGYEEAAAQGLVAG 386 QI G GY E+AA GL+AG Sbjct: 349 QITGCEGYVESAAIGLLAG 367 >gi|313673071|ref|YP_004051182.1| gid protein [Calditerrivibrio nitroreducens DSM 19672] gi|312939827|gb|ADR19019.1| gid protein [Calditerrivibrio nitroreducens DSM 19672] Length = 440 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 88/402 (21%), Positives = 155/402 (38%), Gaps = 70/402 (17%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGL----G 54 + +IGGG AG EAA A+ + L H+T + + C+ ++ + Sbjct: 11 ITIIGGGLAGSEAAFQLAEKKFNVVLYEMRPHKLTEAHQTGLMAELLCSNSLKSIDITNS 70 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L +E++ + L+ ++A I PA G DR+L+ + + + Sbjct: 71 NGLLKKELELMGSLLIKIAYETRI----------PA--GNALSVDRKLFAEKVTNILENH 118 Query: 115 ENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKI----P 170 N+ +I+ E+ + +I +T LT+ F R +I++ K + Sbjct: 119 PNITIIREEITEIPNSRPLI------------IATGPLTSENFARNLINLTKDHLFFYDA 166 Query: 171 AGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT 230 + D+ + + F K +D G D + T +++ F Sbjct: 167 ISPIVDADTINYEKVFFKSRYDKG----------DADYLNCPMTREEYE-------KFYF 209 Query: 231 DKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKS--YGPRYCPSIEDKIVRFGER 288 + I ++E + E + I + S K+ +GP +E+ I GE+ Sbjct: 210 ELINAEKVEF----RSFEKAKYYENCIPIEELASRGFKTLIFGPMRPVGLENPIT--GEK 263 Query: 289 NGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINP 348 + L E G T + + Q + R IPGLE V +R G YIN Sbjct: 264 YYAVVQLRKENKEGTAYNIVGFQTKMKIQEQKRVFRLIPGLENVEFLRYGSIHRNTYINA 323 Query: 349 KELFPTLETKKISG--LFLAGQINGTTGYEEAAAQGLVAGIN 388 + + KI G ++ AGQI+G GY E+ A GL + Sbjct: 324 PNILE--DNYKIRGEDIYFAGQISGVEGYVESIASGLTVAFD 363 >gi|162448004|ref|YP_001621136.1| glucose inhibited division protein [Acholeplasma laidlawii PG-8A] gi|205830304|sp|A9NHD0|TRMFO_ACHLI RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|161986111|gb|ABX81760.1| glucose inhibited division protein [Acholeplasma laidlawii PG-8A] Length = 427 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 1/104 (0%) Query: 286 GERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDY 345 GE+ + L + +N + G T + Q + I+ IPGLE I+R G + Y Sbjct: 251 GEKPYAVVQLRQDDVNKTMYNMVGFQTHMKWGDQKRVIQMIPGLENAEILRYGVIHKNTY 310 Query: 346 I-NPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGIN 388 + +PK L + + I F AGQI+G GY E+AA GL IN Sbjct: 311 LESPKHLNNAFQVRDIPKWFFAGQISGVEGYIESAASGLNVAIN 354 >gi|78356467|ref|YP_387916.1| tRNA (uracil-5-)-methyltransferase Gid [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|123552688|sp|Q312C5|TRMFO_DESDG RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|78218872|gb|ABB38221.1| gid protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 458 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 44/126 (34%), Positives = 59/126 (46%), Gaps = 4/126 (3%) Query: 269 SYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPG 328 ++GP ++D R G R + L E LN + G T L Q + R IPG Sbjct: 260 AFGPFKPVGLDDP--RTGRRPFAVVQLRTENLNKTMFNLVGCQTKLKYGEQDRIFRMIPG 317 Query: 329 LEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGI 387 LE +R G Y+N P+ L K +FLAGQI G GY E+AA G+ G+ Sbjct: 318 LEDAEFVRYGSVHRNTYVNAPQVLNGDQSLKNRPDVFLAGQITGVEGYVESAANGMWLGM 377 Query: 388 N-SARK 392 +ARK Sbjct: 378 MLAARK 383 Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 25/132 (18%) Query: 10 VIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGL-------------GKG 56 ++GGG AGCE A A+ G + L K + +P +G L G G Sbjct: 21 IVGGGLAGCECARKLARAGIAVTLFEMKPHSFSPAHSSPELGELVCSNSLRSDEPEAGVG 80 Query: 57 HLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQEN 116 L +E+ AL L+ VA+A + PA G DR L+ +M + ++ Sbjct: 81 VLKQEMRALGSLVMEVAEATRV----------PA--GKALAVDRGLFAASMTAAMEAEPG 128 Query: 117 LDVIQGEVAGFN 128 + +I+ E+ + Sbjct: 129 ITLIRREITSLD 140 >gi|195952813|ref|YP_002121103.1| tRNA (uracil-5-)-methyltransferase Gid [Hydrogenobaculum sp. Y04AAS1] gi|254789174|sp|B4U7L4|TRMFO_HYDS0 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|195932425|gb|ACG57125.1| gid protein [Hydrogenobaculum sp. Y04AAS1] Length = 457 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 39/117 (33%), Positives = 59/117 (50%), Gaps = 3/117 (2%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF-PTLETKKISGLFLAG 367 G T L + Q + R IP L R G ++ +L PTLE +K + AG Sbjct: 301 GFQTKLTYKEQVRVFRLIPCLRNAVFSRLGSMHRNTFLQSNKLLKPTLELRKNPNILFAG 360 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK-GVLEP 423 QI G GY +AA G++AGIN+ K + +T + +G ++D ++SK G L+P Sbjct: 361 QITGVEGYSASAATGIIAGINAWLKLEGKEPTTPPKT-TMLGALLDYISSKEGELQP 416 Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 17/106 (16%) Query: 36 HKTSTIGSMSCNPAIGGL----GKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAV 91 HKT G + C+ +G G G L +E++ L+ L+ + A + VK G A+ Sbjct: 66 HKTDKFGELVCSNTLGSFEITTGAGLLKKEMELLNSLVIKAAKHS-------YVKAGSAL 118 Query: 92 RGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFN-TEKNIISS 136 DR + + + ILS N++V++ EV N E NI+++ Sbjct: 119 -----AVDRNEFSDFITKTILSHPNIEVVREEVESLNENELNIVAT 159 >gi|260459806|ref|ZP_05808060.1| gid protein [Mesorhizobium opportunistum WSM2075] gi|259034608|gb|EEW35865.1| gid protein [Mesorhizobium opportunistum WSM2075] Length = 469 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 36/79 (45%), Positives = 42/79 (53%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + RTIPGLE + R G YIN P L +L+ K GL AG Sbjct: 289 GFQTKLKHAEQVRVFRTIPGLENADFARLGGLHRNTYINSPTLLDASLQLKSRPGLRFAG 348 Query: 368 QINGTTGYEEAAAQGLVAG 386 QI G GY E+AA GL+AG Sbjct: 349 QITGCEGYVESAAIGLLAG 367 >gi|327189119|gb|EGE56304.1| glucose inhibited division protein A [Rhizobium etli CNPAF512] Length = 478 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 40/114 (35%), Positives = 52/114 (45%), Gaps = 2/114 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q R IPGLE R G YIN P L P+L K GL AG Sbjct: 292 GFQTKLKYGAQADIFRMIPGLESAEFARLGGLHRNTYINSPTLLDPSLTLKSRPGLRFAG 351 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 QI G GY E+A+ GL+AG A K + I + +G ++ +T ++ Sbjct: 352 QITGCEGYVESASVGLMAG-RFAAAERKGEAILLPPATTALGSLLGHITGGHIV 404 >gi|13471167|ref|NP_102736.1| tRNA (uracil-5-)-methyltransferase Gid [Mesorhizobium loti MAFF303099] gi|26006771|sp|Q98LE1|TRMFO_RHILO RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|14021911|dbj|BAB48522.1| glucose-inhibited division protein [Mesorhizobium loti MAFF303099] Length = 472 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 36/79 (45%), Positives = 42/79 (53%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + RTIPGLE + R G YIN P L +L+ K GL AG Sbjct: 289 GFQTKLKHAEQVRVFRTIPGLENADFARLGGLHRNTYINSPTLLDQSLQLKSRPGLRFAG 348 Query: 368 QINGTTGYEEAAAQGLVAG 386 QI G GY E+AA GL+AG Sbjct: 349 QITGCEGYVESAAIGLLAG 367 >gi|256827138|ref|YP_003151097.1| tRNA:m(5)U-54 methyltransferase [Cryptobacterium curtum DSM 15641] gi|256583281|gb|ACU94415.1| tRNA:m(5)U-54 methyltransferase [Cryptobacterium curtum DSM 15641] Length = 530 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 105/473 (22%), Positives = 180/473 (38%), Gaps = 76/473 (16%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGG-- 52 + Y V +IG G AG EAA A G LI H+T + C+ ++ Sbjct: 20 QKYHVNIIGAGLAGSEAALQLAARGIKVTLIESRPLFTDGVHETGLCAELVCSNSLKSES 79 Query: 53 --LGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQRE 110 G L RE+D L + + A R V G A+ DR + A+ + Sbjct: 80 LSSAAGMLKRELDVLGSFLYQTA-------RETRVPAGGAL-----AVDRYAFAHAVTDQ 127 Query: 111 ILSQENLDVIQGEVAGFNTEKNIISSIVM--QDNSMIRCSTVVLTTG--------TFLRG 160 + + +++++ GE + + +I + ++ + V++ TG F+ G Sbjct: 128 VTAAPSINLVCGEALSVHADGSISLRVDKNGREEKTPKADAVIVATGPLTSDSFADFITG 187 Query: 161 VIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFAD 220 V L ++SL + + F R + G L+ + K E + Sbjct: 188 VTGQDNLSFFDAAAPIVMADSLDTNIL---FRQSRYEEGQGDYLNAP---FTKEEYE--- 238 Query: 221 ERLIPFSFMTDKITNRQIECGITRTNLETHRIIM--ENIKHSAIYSGDIKSYGPRYCPSI 278 F+T ++ +++ R + ET + + I+ A D +GP + Sbjct: 239 ------QFITALLSAKRV----VRRDFETKELFQACQPIEEIARAGVDAPRFGPLKPVGL 288 Query: 279 EDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPG 338 D +R +R + L E G T L Q + + IPGLE+ R G Sbjct: 289 VD--LRTHKRPWAALQLRAENREGTCYNLVGFQTNLTFPEQRRVFQMIPGLEQAEFARYG 346 Query: 339 YAIEYDYINPKELFPT---LETKKISG--LFLAGQINGTTGYEEAAAQGLVAGINSARKS 393 +++ +L + +T++ G LF AGQI GT GY EA GL A + Sbjct: 347 VMHRNTFMDAPQLLASDLSFKTERWQGVPLFAAGQITGTEGYCEAIRSGLHAAFGVVSRL 406 Query: 394 NKLDCICFSRTDSY--IGVMIDDLTSK---------GVLEPY--RMFTSRAEY 433 L SR ++ + + D T++ G++EP R+ RA Y Sbjct: 407 RNLTPPPLSRQMAFGSLWLWASDPTTEDYQPMHVNFGIIEPLAERVKNKRARY 459 >gi|256383910|gb|ACU78480.1| methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO 2 [Mycoplasma mycoides subsp. capri str. GM12] gi|256384741|gb|ACU79310.1| methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO 2 [Mycoplasma mycoides subsp. capri str. GM12] gi|296455963|gb|ADH22198.1| methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO 2 [synthetic Mycoplasma mycoides JCVI-syn1.0] Length = 424 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 1/87 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT-LETKKISGLFLAG 367 T+L Q + IPGLE + I+R G + +YIN K+L ++ K +F AG Sbjct: 267 NFQTSLMWNEQLKVFSLIPGLENLKIMRYGVMHKNNYINTKKLLNLGVQLKTNKNIFFAG 326 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSN 394 QI G GY E+ GLV+ IN R N Sbjct: 327 QIIGVDGYVESVCSGLVSAINLDRYLN 353 >gi|298492891|ref|YP_003723068.1| gid protein ['Nostoc azollae' 0708] gi|298234809|gb|ADI65945.1| gid protein ['Nostoc azollae' 0708] Length = 438 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 59/127 (46%), Gaps = 3/127 (2%) Query: 266 DIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRT 325 D YGP + D R GE I L E + G T L Q + + Sbjct: 240 DTMRYGPLKPVGLSDS--RTGESPYAVIQLRQEDKAHQLWNMVGFQTNLRWGEQKRVFQM 297 Query: 326 IPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLV 384 IPGLEK +R G ++N P+ + +L+ K+ L AGQ+ GT GY A+A G + Sbjct: 298 IPGLEKAEFVRLGVMHRNTFLNAPQLMSASLQFKERPTLLAAGQLIGTEGYTAASAGGWL 357 Query: 385 AGINSAR 391 AG N+AR Sbjct: 358 AGTNAAR 364 >gi|212704423|ref|ZP_03312551.1| hypothetical protein DESPIG_02479 [Desulfovibrio piger ATCC 29098] gi|212672144|gb|EEB32627.1| hypothetical protein DESPIG_02479 [Desulfovibrio piger ATCC 29098] Length = 453 Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 49/166 (29%), Positives = 70/166 (42%), Gaps = 17/166 (10%) Query: 284 RFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEY 343 R G R + L E LN + G T L Q + R +PGLEK R G Sbjct: 272 RTGRRPWAILQLRAETLNGETCNLVGCQTKLTYGEQARVFRMVPGLEKAEFARFGSMHRN 331 Query: 344 DYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFS 402 Y+N P L L K +FLAGQI G GY E+AA G+ G+ A ++ + + Sbjct: 332 TYVNAPVALNEDLSLKARPRVFLAGQITGVEGYLESAACGMWLGMLLAARAQGRE-LALP 390 Query: 403 RTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTP 448 + +G +++ L + P + F +P NA L P Sbjct: 391 PLECALGALLNHLRT-----PVKHF----------QPSNAHFGLMP 421 >gi|190891525|ref|YP_001978067.1| glucose inhibited division protein A [Rhizobium etli CIAT 652] gi|190696804|gb|ACE90889.1| glucose inhibited division protein A [Rhizobium etli CIAT 652] Length = 476 Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 45/141 (31%), Positives = 62/141 (43%), Gaps = 8/141 (5%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGL+ R G YIN P L P+L K GL AG Sbjct: 292 GFQTKLKYGAQAEIFRMIPGLQNAEFARLGGLHRNTYINSPTLLDPSLTLKSRPGLRFAG 351 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 QI G GY E+A+ GL+AG A K + I + +G ++ +T ++ Sbjct: 352 QITGCEGYVESASVGLMAG-RFAAAERKGEAILLPPATTALGSLLGHITGGHIV------ 404 Query: 428 TSRAEYRISLRPDNADNRLTP 448 T + S +P N + L P Sbjct: 405 TDEEPGKRSFQPMNINFGLFP 425 >gi|154253481|ref|YP_001414305.1| gid protein [Parvibaculum lavamentivorans DS-1] gi|205830313|sp|A7HXL5|TRMFO_PARL1 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|154157431|gb|ABS64648.1| gid protein [Parvibaculum lavamentivorans DS-1] Length = 480 Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 35/79 (44%), Positives = 40/79 (50%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + RTIPGLEK R G +IN PK L P + K L AG Sbjct: 308 GFQTKLKHGEQTRVFRTIPGLEKAEFARLGGLHRNTFINSPKLLDPVMRLAKEPRLRFAG 367 Query: 368 QINGTTGYEEAAAQGLVAG 386 QI G GY E+ A GL+AG Sbjct: 368 QITGVEGYVESGAMGLLAG 386 >gi|227498488|ref|ZP_03928634.1| conserved hypothetical protein [Acidaminococcus sp. D21] gi|226903946|gb|EEH89864.1| conserved hypothetical protein [Acidaminococcus sp. D21] Length = 438 Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 48/174 (27%), Positives = 73/174 (41%), Gaps = 23/174 (13%) Query: 250 HRIIMEN---IKHSAIYSGDIKSYGPRYCPSIED--------KIVRFGERNGHQIFLEPE 298 H ++ E I+ A+ D +GP + D +V+ + NG Sbjct: 219 HGMVFEGCMPIEEMAVRGEDTMRFGPLKPVGLPDPRTGEDPYAVVQLRQDNGAGSLFNMV 278 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLET 357 G T + +P Q + R IPGLE+ IR G + Y+N P L Sbjct: 279 GFQTHLRWPE----------QKRVFRMIPGLEEAEFIRYGVMHKNSYLNSPLLLDADYSL 328 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 + L+ AGQ+ G GY E+AA GL AGI +R + + F R ++ IG + Sbjct: 329 RSHPHLYFAGQMTGVEGYVESAASGLAAGIYLSRTLSGKAKLLFPR-ETAIGAL 381 >gi|226227914|ref|YP_002762020.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme Gid [Gemmatimonas aurantiaca T-27] gi|226091105|dbj|BAH39550.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme Gid [Gemmatimonas aurantiaca T-27] Length = 461 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 31/79 (39%), Positives = 42/79 (53%), Gaps = 3/79 (3%) Query: 314 LPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGT 372 +PE Q + R IPGL + +R G Y+N P L P L + AGQI G Sbjct: 302 IPE--QARVFRMIPGLAEAEFLRYGSIHRNSYVNAPAALSPHLALRDAPTTLFAGQITGV 359 Query: 373 TGYEEAAAQGLVAGINSAR 391 GY E++A G++AGIN +R Sbjct: 360 EGYTESSATGMLAGINLSR 378 >gi|163759435|ref|ZP_02166520.1| glucose-inhibited division protein A [Hoeflea phototrophica DFL-43] gi|162283032|gb|EDQ33318.1| glucose-inhibited division protein A [Hoeflea phototrophica DFL-43] Length = 478 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 39/114 (34%), Positives = 56/114 (49%), Gaps = 2/114 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IR IPGLE R G Y+N P L +L+ + GL AG Sbjct: 294 GFQTKLKYGAQAEIIRMIPGLENAEFARLGGLHRNTYLNSPLLLDGSLQLRSRPGLRFAG 353 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 QI G GY E+AA GL+AG +A + N + + + G +++ +T +L Sbjct: 354 QITGCEGYVESAAMGLLAGRFAAAERNG-ELLAPPPPTTAFGALLNHITGGHIL 406 >gi|254423011|ref|ZP_05036729.1| tRNA:m(5)U-54 methyltransferase [Synechococcus sp. PCC 7335] gi|196190500|gb|EDX85464.1| tRNA:m(5)U-54 methyltransferase [Synechococcus sp. PCC 7335] Length = 462 Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF-PTLETKKISGLFLAG 367 G T L Q + R +PGLE +R G +IN EL +L+ K L AG Sbjct: 293 GFQTNLRWGEQKRVFRMVPGLENAEFVRMGVMHRNTFINSPELLNSSLQFKSRPNLLAAG 352 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ GT GY A A G +AG N+AR + + T + +G ++D ++S Sbjct: 353 QLVGTEGYTAAIAGGWLAGTNAARIALGKPPLTLPIT-TMLGALVDFISS 401 >gi|317057710|ref|YP_004106177.1| gid protein [Ruminococcus albus 7] gi|315449979|gb|ADU23543.1| gid protein [Ruminococcus albus 7] Length = 440 Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 34/97 (35%), Positives = 46/97 (47%), Gaps = 1/97 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE +R G +IN PK L ++ L+ AG Sbjct: 284 GFQTNLKFGEQKRVFSLIPGLENAEFMRYGVMHRNTFINSPKLLNEQFNMRERPSLYFAG 343 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 Q+ G GY E+AA G+ AG+N AR+ L + T Sbjct: 344 QMTGVEGYIESAASGIFAGLNMARQIQGLSPVSLPET 380 >gi|300022799|ref|YP_003755410.1| gid protein [Hyphomicrobium denitrificans ATCC 51888] gi|299524620|gb|ADJ23089.1| gid protein [Hyphomicrobium denitrificans ATCC 51888] Length = 477 Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 40/109 (36%), Positives = 55/109 (50%), Gaps = 2/109 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + RTIPGL+ R G Y+N PK L +L K S L AG Sbjct: 290 GFQTKLKHAEQVRVFRTIPGLQNAEFARLGGLHRNTYLNSPKLLDRSLRLKANSRLRFAG 349 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 QI G GY E+AA GL+AG +A ++ + T + +G ++D +T Sbjct: 350 QITGVEGYVESAAMGLLAGRFAAAQALGRETDAPPAT-TALGALLDHIT 397 >gi|162319788|ref|YP_421845.2| tRNA (uracil-5-)-methyltransferase Gid [Magnetospirillum magneticum AMB-1] gi|205830457|sp|Q2W4D9|TRMFO_MAGSA RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase Length = 447 Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 40/118 (33%), Positives = 59/118 (50%), Gaps = 2/118 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE R G +IN P+ L TL K L LAG Sbjct: 283 GFQTKLRHGEQARIFRAIPGLENAEFARLGGLHRNTFINGPRVLDRTLRLKAQPRLRLAG 342 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 Q+ G GY E++A GL+AG+ +A ++ D + T + +G +++ +T E Y+ Sbjct: 343 QVTGCEGYVESSAIGLLAGLFAAAEALGRDMLRPPAT-TALGALLNHVTGDAEAETYQ 399 >gi|121602120|ref|YP_988865.1| tRNA (uracil-5-)-methyltransferase Gid [Bartonella bacilliformis KC583] gi|166989559|sp|A1USB2|TRMFO_BARBK RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|120614297|gb|ABM44898.1| gid protein [Bartonella bacilliformis KC583] Length = 464 Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 41/110 (37%), Positives = 56/110 (50%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + RTIPGLEK R G Y++ P L TL KK L AG Sbjct: 291 GFQTKLKYSEQVRIFRTIPGLEKAEFARLGGLHRNTYLDSPTILDETLRLKKKPQLRFAG 350 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 QI G GY E++A GL+AG +A + N +T ++ G +++ +TS Sbjct: 351 QITGCEGYVESSAIGLLAGRFAAAEYNNTYPSLPPKTTAF-GALLNHITS 399 >gi|77918020|ref|YP_355835.1| tRNA (uracil-5-)-methyltransferase Gid [Pelobacter carbinolicus DSM 2380] gi|123574961|sp|Q3A7H9|TRMFO_PELCD RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|77544103|gb|ABA87665.1| cell division control protein GidA [Pelobacter carbinolicus DSM 2380] Length = 459 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 36/110 (32%), Positives = 49/110 (44%), Gaps = 11/110 (10%) Query: 282 IVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAI 341 +V+ + N H G T + YP Q + RTIPGL+ R G Sbjct: 268 VVQLRQDNLHATLFNMVGFQTKLTYPE----------QRRIFRTIPGLQDARFARLGSMH 317 Query: 342 EYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSA 390 +IN P+ L L +F AGQI G GY E+AA G +AG+ +A Sbjct: 318 RNTFINAPRCLDQHLRLTSDPRMFFAGQITGVEGYVESAACGFLAGLFAA 367 >gi|237736956|ref|ZP_04567437.1| tRNA (uracil-5-)-methyltransferase Gid [Fusobacterium mortiferum ATCC 9817] gi|229420818|gb|EEO35865.1| tRNA (uracil-5-)-methyltransferase Gid [Fusobacterium mortiferum ATCC 9817] Length = 437 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 40/112 (35%), Positives = 53/112 (47%), Gaps = 4/112 (3%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF-PTLETKKISGLFLAG 367 G T L Q + IPGLE IR G +IN +L TL+ K ++ AG Sbjct: 281 GFQTNLKWGEQKRVFSMIPGLENAEFIRYGVMHRNTFINSTQLLDETLKLKTKDNIYFAG 340 Query: 368 QINGTTGYEEAAAQGLVAGINSA-RKSNKLDCICFSRTDSYIGVMIDDLTSK 418 QI G+ GY + A G++A IN A R K I R S IG M+ +T + Sbjct: 341 QITGSEGYVSSVATGMMAAINIAHRLEEKSSFILDDR--SAIGAMVKYITEE 390 >gi|82946422|dbj|BAE51286.1| NAD(FAD)-utilizing enzyme possibly involved in translation [Magnetospirillum magneticum AMB-1] Length = 412 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 40/118 (33%), Positives = 59/118 (50%), Gaps = 2/118 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE R G +IN P+ L TL K L LAG Sbjct: 248 GFQTKLRHGEQARIFRAIPGLENAEFARLGGLHRNTFINGPRVLDRTLRLKAQPRLRLAG 307 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 Q+ G GY E++A GL+AG+ +A ++ D + T + +G +++ +T E Y+ Sbjct: 308 QVTGCEGYVESSAIGLLAGLFAAAEALGRDMLRPPAT-TALGALLNHVTGDAEAETYQ 364 >gi|240850278|ref|YP_002971671.1| glucose inhibited division protein A [Bartonella grahamii as4aup] gi|240267401|gb|ACS50989.1| glucose inhibited division protein A [Bartonella grahamii as4aup] Length = 470 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 9/163 (5%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLEK R G Y+N P L TL K+ L AG Sbjct: 291 GFQTKLKYGEQIRIFRMIPGLEKAEFARLGGLHRNTYLNSPIILDQTLRLKQKKQLRFAG 350 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 QI G GY E+AA GL+AG +A + + + C + G +++ +T +++ Sbjct: 351 QITGCEGYVESAAIGLLAGHFAAAEYHHIS-PCLPPQTTAFGALLNHITGGHIID----- 404 Query: 428 TSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQE 470 +AE + S +P N + L P + G+R + K +++ Sbjct: 405 -EKAETQ-SFQPMNINFGLFPPIASIRHSGKRLASKEKKLVKK 445 >gi|294083972|ref|YP_003550729.1| gid protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292663544|gb|ADE38645.1| gid protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 453 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 2/118 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + +TIPGLE R G +IN P+ L P L K + + AG Sbjct: 290 GFQTKLKHAEQVRIFQTIPGLEDAQFARLGGLHRNTFINSPRLLDPQLRMKSMPRIRFAG 349 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 QI G GY E+AA GL+AG +A + D D+ G ++ +T + + ++ Sbjct: 350 QITGVEGYVESAAIGLMAGQMAALELKGQDWTA-PPLDTAHGALLSHITGGAMADSFQ 406 >gi|42560917|ref|NP_975368.1| tRNA (uracil-5-)-methyltransferase Gid [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|81618854|sp|Q6MTM6|TMFO1_MYCMS RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO 1; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase 1; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase 1 gi|42492414|emb|CAE77010.1| glucose-inhibited division protein [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|301320811|gb|ADK69454.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 424 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 1/87 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT-LETKKISGLFLAG 367 T+L Q + IPGLE + I+R G + +YIN K+L ++ K +F AG Sbjct: 267 NFQTSLMWNEQLKVFSLIPGLENLKIMRYGVMHKNNYINTKKLLNLGVQLKTNKNIFFAG 326 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSN 394 QI G GY E+ GL++ IN R N Sbjct: 327 QIIGVDGYVESVCSGLISAINLDRYLN 353 >gi|209964368|ref|YP_002297283.1| glucose inhibited division protein [Rhodospirillum centenum SW] gi|209957834|gb|ACI98470.1| glucose inhibited division protein [Rhodospirillum centenum SW] Length = 457 Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 40/118 (33%), Positives = 57/118 (48%), Gaps = 2/118 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE R G ++N P+ L P L K + L AG Sbjct: 290 GFQTKLKYAEQTRVFRMIPGLENAEFARLGGMHRNTFLNSPRLLDPVLRLKAMPRLRFAG 349 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 QI G GY E+AA GL+AG +A + D I T + +G +++ +T E ++ Sbjct: 350 QITGCEGYVESAAVGLLAGRFAAAERLGRDPIIPPAT-TALGALLNHITGGAEAETFQ 406 >gi|94971655|ref|YP_593703.1| tRNA (uracil-5-)-methyltransferase Gid [Candidatus Koribacter versatilis Ellin345] gi|205830305|sp|Q1IHM1|TRMFO_ACIBL RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|94553705|gb|ABF43629.1| gid protein [Candidatus Koribacter versatilis Ellin345] Length = 444 Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 36/97 (37%), Positives = 47/97 (48%), Gaps = 1/97 (1%) Query: 293 IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKEL 351 + L E L D G L Q + +R IPGLE +R G YIN P L Sbjct: 264 VQLRQENLRADSYNLVGFQNHLKYGDQARVMRLIPGLENAKFLRYGQIHRNTYINSPTLL 323 Query: 352 FPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGIN 388 TL K+ +F AGQI+G GY E+ A G +AG++ Sbjct: 324 TETLRMKEHPNVFFAGQISGVEGYVESIATGQMAGMH 360 >gi|147774864|emb|CAN62514.1| hypothetical protein VITISV_035600 [Vitis vinifera] Length = 76 Score = 54.3 bits (129), Expect = 7e-05, Method: Composition-based stats. Identities = 23/33 (69%), Positives = 27/33 (81%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALIT 35 N YDVIV+GGGHAGCEAA +A+LGA T L+T Sbjct: 28 NERYDVIVVGGGHAGCEAALASARLGAKTLLLT 60 >gi|256831005|ref|YP_003159733.1| gid protein [Desulfomicrobium baculatum DSM 4028] gi|256580181|gb|ACU91317.1| gid protein [Desulfomicrobium baculatum DSM 4028] Length = 433 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 33/80 (41%), Positives = 42/80 (52%), Gaps = 1/80 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + TIPGL +R G Y+ P+ L PTLE + G +LAG Sbjct: 284 GFQTKLKYGEQKRIFLTIPGLAHAEFLRMGSIHRNTYVLAPEVLTPTLELRGRPGTYLAG 343 Query: 368 QINGTTGYEEAAAQGLVAGI 387 QI+G GY E+AA GL G+ Sbjct: 344 QISGVEGYLESAATGLWLGL 363 >gi|148377414|ref|YP_001256290.1| tRNA (uracil-5-)-methyltransferase Gid [Mycoplasma agalactiae PG2] gi|205830311|sp|A5IXT6|TRMFO_MYCAP RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|148291460|emb|CAL58845.1| Glucose inhibited division protein [Mycoplasma agalactiae PG2] Length = 427 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 1/110 (0%) Query: 283 VRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIE 342 +R E + L + N + + T++ Q++ I+ +P L I+R G + Sbjct: 245 IRQTENTYATVLLREDDYNENFLRIVNFQTSIKIPWQNEIIKAVPALANALILRYGVMHK 304 Query: 343 YDYINPKELFP-TLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSAR 391 DYIN + + K +F AGQ+ GT GY EA+A ++ IN R Sbjct: 305 NDYINSANVLDDNFQLKSNPNIFFAGQLTGTDGYVEASASAIICAINVDR 354 >gi|95929068|ref|ZP_01311813.1| gid protein [Desulfuromonas acetoxidans DSM 684] gi|95134969|gb|EAT16623.1| gid protein [Desulfuromonas acetoxidans DSM 684] Length = 450 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 11/110 (10%) Query: 282 IVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAI 341 +++ + N H G T + YP Q + RTIPGLEK R G Sbjct: 270 VIQLRQDNRHATSYNIVGFQTKLTYPE----------QRRIFRTIPGLEKAEFERLGSVH 319 Query: 342 EYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSA 390 +IN P+ L L+ L+ AGQI G GY E+AA G +AG+ +A Sbjct: 320 RNTFINAPRCLNGRLQLTSDPRLYFAGQITGVEGYVESAACGYLAGLIAA 369 Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust. Identities = 36/140 (25%), Positives = 61/140 (43%), Gaps = 25/140 (17%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGLGK--- 55 + +IGGG AGCEAA AA+LG L+ H + + + C+ ++ G G Sbjct: 13 LTIIGGGLAGCEAAWQAAELGIDVCLLEMKPIQFSPAHHSEGLAELVCSNSLRGTGMNNA 72 Query: 56 -GHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L E+ + L + ADA + PA G DRE + + +I + Sbjct: 73 VGCLKEELRRANCLFMQAADATAV----------PA--GGALAVDREAFSDWVGNKIAAH 120 Query: 115 ENLDVIQGEVAGFNTEKNII 134 ++ +++ EV + +I Sbjct: 121 SHITLMREEVTTLPEQGPVI 140 >gi|16331423|ref|NP_442151.1| tRNA (uracil-5-)-methyltransferase Gid [Synechocystis sp. PCC 6803] gi|26006760|sp|Q55692|TRMFO_SYNY3 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|1001593|dbj|BAA10221.1| glucose inhibited division protein A [Synechocystis sp. PCC 6803] Length = 456 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 34/84 (40%), Positives = 42/84 (50%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE +R G +IN P+ L +L LF AG Sbjct: 292 GFQTNLRWGEQGRVFRLIPGLENAEFVRMGVMHRNTFINSPQLLTASLHFGDRQTLFAAG 351 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ GT GY A A G +AG N+AR Sbjct: 352 QLVGTEGYAAATAGGWLAGTNAAR 375 >gi|91977243|ref|YP_569902.1| tRNA (uracil-5-)-methyltransferase Gid [Rhodopseudomonas palustris BisB5] gi|123762693|sp|Q136I8|TRMFO_RHOPS RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|91683699|gb|ABE40001.1| gid protein [Rhodopseudomonas palustris BisB5] Length = 477 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 34/83 (40%), Positives = 42/83 (50%), Gaps = 1/83 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + RTIPGLE R G ++N PK L P L + L AG Sbjct: 295 GFQTKLNYGAQQRVFRTIPGLENAEFARLGGLHRNTFLNSPKLLDPQLRLRAAPRLRFAG 354 Query: 368 QINGTTGYEEAAAQGLVAGINSA 390 Q+ G GY E+A GLVAG+ +A Sbjct: 355 QMTGCEGYVESAGIGLVAGLCAA 377 >gi|117926758|ref|YP_867375.1| gid protein [Magnetococcus sp. MC-1] gi|205830339|sp|A0LDC6|TRMFO_MAGSM RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|117610514|gb|ABK45969.1| gid protein [Magnetococcus sp. MC-1] Length = 439 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 37/112 (33%), Positives = 53/112 (47%), Gaps = 2/112 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + TIPGLE+ +R G +IN P L TL+ K L AG Sbjct: 282 GFQTKLSWPAQKRIFATIPGLEQAEFVRLGALHRNTFINSPTLLSETLQLKTQPRLLFAG 341 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 QI G GY E+ A GL+AG A K + + + + +G ++ +T + Sbjct: 342 QITGVEGYVESTACGLMAGRIVAHKM-RGEAVSIPPQTTALGALMRHITGEA 392 >gi|213417802|ref|ZP_03350912.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 61 Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats. Identities = 24/53 (45%), Positives = 39/53 (73%) Query: 563 LIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 ++P DY + LSNE+ KL+ KP ++ QAS+I G+TPAA+++LL+++KK Sbjct: 1 MLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISGVTPAAISILLVWLKK 53 >gi|167771634|ref|ZP_02443687.1| hypothetical protein ANACOL_03006 [Anaerotruncus colihominis DSM 17241] gi|167666274|gb|EDS10404.1| hypothetical protein ANACOL_03006 [Anaerotruncus colihominis DSM 17241] Length = 440 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 96/425 (22%), Positives = 149/425 (35%), Gaps = 82/425 (19%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIG----GLG 54 V VIG G AGCEAA A G L H + + C+ ++ G Sbjct: 3 VHVIGAGLAGCEAAWALANQGIRVCLYEMKPQRFSPAHHSEQFAELVCSNSLKARRLGSA 62 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L E+ L L A+A +V G A+ DR+ + + + I + Sbjct: 63 AGMLKEEMRMLGSLTVACAEAT-------SVAAGGAL-----AVDRDAFSALVTKHIRAH 110 Query: 115 ENLDVIQGEVAGFNTEK--NIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLK---- 168 ++V+ GEV ++ I + + D R S + T +F I + Sbjct: 111 ALIEVVSGEVTDIPLDRLTVIATGPLTSDALAARISELCGGTLSFYDAAAPIVTYESLDL 170 Query: 169 ---IPAGRMGDSPSNSLFNSFMKFDFDT--GRLKTGTPARLDGKTIIWDKTEKQFADERL 223 A R + + F K +++ L+T PA L +D+ EK+ E Sbjct: 171 DRVFFAARYDRGDGDYINCPFNKEEYEAFYEALRTAEPAPLHD----FDQAEKRVY-EGC 225 Query: 224 IPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIV 283 +P M + D YGP + + Sbjct: 226 MPIEIMARR-------------------------------GPDTIRYGPLKPVGLRNP-- 252 Query: 284 RFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEY 343 R G R + L E + G T L Q + IPGL +R G Sbjct: 253 RTGHRPWAVVQLRRENSAGTLYNLVGFQTNLRFGEQKRVFSMIPGLAHAEFMRYGVMHRN 312 Query: 344 DYI-NPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSN-------K 395 +I +P L T+ ++ ++ AGQI G GY E+A G++ G AR+ Sbjct: 313 TFIGSPWLLDETMRMREHDRIYFAGQITGVEGYMESAMSGILTGRQIARRLQGKEPLKLP 372 Query: 396 LDCIC 400 LDC+C Sbjct: 373 LDCMC 377 >gi|299139068|ref|ZP_07032244.1| gid protein [Acidobacterium sp. MP5ACTX8] gi|298598748|gb|EFI54910.1| gid protein [Acidobacterium sp. MP5ACTX8] Length = 453 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 1/99 (1%) Query: 293 IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKEL 351 + L E L D G +L Q + +R IPGLE +R G Y++ P L Sbjct: 278 VQLRQENLRADSYNLVGFQNSLKYGEQARVLRMIPGLEHATFLRYGQIHRNTYLHAPSLL 337 Query: 352 FPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSA 390 TL+ K G+ +AGQ++G GY E+ A GL+AG +A Sbjct: 338 TETLQLKAHPGILIAGQLSGIEGYTESIASGLLAGRYAA 376 >gi|331703367|ref|YP_004400054.1| methylenetetrahydrofolate tRNA (uracil 5 ) methyltransferase [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328801922|emb|CBW54075.1| Methylenetetrahydrofolate tRNA (uracil 5 ) methyltransferase [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 424 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 1/87 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT-LETKKISGLFLAG 367 T L Q + IPGLE + I+R G + +YIN K+L ++ K +F AG Sbjct: 267 NFQTNLMWNEQLKVFSLIPGLENLKIMRYGVMHKNNYINTKKLLNLGVQLKTHKNIFFAG 326 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSN 394 QI G GY E+ GL++ IN R N Sbjct: 327 QIIGVDGYVESVCSGLISAINLDRYLN 353 >gi|289523582|ref|ZP_06440436.1| tRNA:M(5)U-54 methyltransferase [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503274|gb|EFD24438.1| tRNA:M(5)U-54 methyltransferase [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 445 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 34/81 (41%), Positives = 40/81 (49%), Gaps = 1/81 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE+ R G Y+N P L L K LFLAG Sbjct: 285 GFQTNLRWSEQGRIFRLIPGLEEAEFARYGVMHRNIYVNAPVVLDEYLRLKGFDDLFLAG 344 Query: 368 QINGTTGYEEAAAQGLVAGIN 388 Q+ G GY E+ A GLVA +N Sbjct: 345 QLAGVEGYVESTAMGLVAALN 365 Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust. Identities = 40/142 (28%), Positives = 60/142 (42%), Gaps = 25/142 (17%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIG----GLG 54 V ++GGG AG EAA AK G L H+TS + C+ ++G Sbjct: 13 VTIVGGGLAGSEAAYQLAKRGIKVRLYEMRPKKYPPAHRTSKFAELVCSNSLGSDVLSSP 72 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L E+ LD L+ + AD + K PA G DRE + + I S Sbjct: 73 AGILKAELRELDSLIIKCAD----------LHKVPA--GWALAVDREAFSEEVTSRIGSM 120 Query: 115 ENLDVIQGEVAGFNTEKNIISS 136 ++++I+ EV I++S Sbjct: 121 PSVEIIRDEVEKIGGGPAIVAS 142 >gi|303328649|ref|ZP_07359051.1| gid protein [Desulfovibrio sp. 3_1_syn3] gi|302861241|gb|EFL84213.1| gid protein [Desulfovibrio sp. 3_1_syn3] Length = 236 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/98 (35%), Positives = 46/98 (46%), Gaps = 1/98 (1%) Query: 284 RFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEY 343 R G R + L E N++ G T L + Q + R +PGLE+ R G Sbjct: 139 RTGRRPWAVLQLRAENANSETCNLVGCQTKLTQPEQARVFRLVPGLERAEFARYGSMHRN 198 Query: 344 DYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAA 380 Y+N P+ L L K +FLAGQI G GY E+AA Sbjct: 199 TYVNAPEALNADLSLKTCPHVFLAGQITGVEGYVESAA 236 >gi|303228925|ref|ZP_07315735.1| tRNA:M(5)U-54 methyltransferase [Veillonella atypica ACS-134-V-Col7a] gi|302516339|gb|EFL58271.1| tRNA:M(5)U-54 methyltransferase [Veillonella atypica ACS-134-V-Col7a] Length = 438 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 45/140 (32%), Positives = 58/140 (41%), Gaps = 3/140 (2%) Query: 266 DIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRT 325 D YGP + DK R E + + L E + G T L Q + Sbjct: 239 DTLRYGPLKPVGLVDK--RTNEESYAVVQLRKENKEGTMFNLVGFQTHLKWGEQKRVFGL 296 Query: 326 IPGLEKVNIIRPGYAIEYDYINPKELF-PTLETKKISGLFLAGQINGTTGYEEAAAQGLV 384 IPGLE IR G YIN EL + + LF AGQ+ G GY E+AA GL+ Sbjct: 297 IPGLENAEFIRYGVMHRNTYINSPELLNHAFQLQSDHRLFFAGQMTGVEGYLESAASGLM 356 Query: 385 AGINSARKSNKLDCICFSRT 404 G+ R + I F +T Sbjct: 357 VGLQVKRYLDDNAFINFPKT 376 >gi|162453390|ref|YP_001615757.1| gid protein [Sorangium cellulosum 'So ce 56'] gi|205830340|sp|A9FRC1|TRMFO_SORC5 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|161163972|emb|CAN95277.1| gid protein [Sorangium cellulosum 'So ce 56'] Length = 477 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 3/120 (2%) Query: 269 SYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPG 328 ++GP + D R G R + L PE G T + Q + R +PG Sbjct: 282 AFGPMKPVGLTDP--RTGRRPYAVLQLRPEDEAATAYNLVGFQTRMKYAEQLRVFRMVPG 339 Query: 329 LEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGI 387 LE+ +R G +++ P L P +E + + G+ LAGQI G GY E+AA G + I Sbjct: 340 LEEAEFLRMGSVHRNTFVDAPALLGPAMELRALPGVHLAGQIAGVEGYVESAAAGFLCAI 399 >gi|150396397|ref|YP_001326864.1| tRNA (uracil-5-)-methyltransferase Gid [Sinorhizobium medicae WSM419] gi|166989566|sp|A6U8P9|TRMFO_SINMW RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|150027912|gb|ABR60029.1| gid protein [Sinorhizobium medicae WSM419] Length = 480 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/79 (44%), Positives = 41/79 (51%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLEK R G YIN P L +L K +GL AG Sbjct: 294 GFQTKLKYGAQGEVFRMIPGLEKAEFARLGGLHRNTYINSPTLLDQSLTLKSRAGLRFAG 353 Query: 368 QINGTTGYEEAAAQGLVAG 386 QI G GY E+A+ GL+AG Sbjct: 354 QITGCEGYVESASIGLLAG 372 >gi|66576100|gb|AAY51657.1| mitochondrial MTO1 [Nasalis larvatus] Length = 50 Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 19/41 (46%), Positives = 32/41 (78%) Query: 317 EIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 E+Q + I I GLEK +++PGY ++YDY++P+++ P+LET Sbjct: 1 ELQEKMITCIRGLEKAKVMQPGYGVQYDYLDPRQITPSLET 41 >gi|15805245|ref|NP_293933.1| tRNA (uracil-5-)-methyltransferase Gid [Deinococcus radiodurans R1] gi|6457879|gb|AAF09795.1|AE001883_1 gid protein [Deinococcus radiodurans R1] Length = 482 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q ++ IPGL +I+R G Y+N P+ L TL+ + +AG Sbjct: 295 GFQTGLKWGDQKAVVQLIPGLHNADIVRYGVMHRNTYLNAPEVLDSTLQLRADPQKLVAG 354 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 + GT GY E++A G +AG N+AR + L+ + +S +G ++ L S Sbjct: 355 VLAGTEGYLESSATGWLAGTNAARLALGLEPLT-PPAESMLGGLVRYLAS 403 >gi|222100824|ref|YP_002535392.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gid [Thermotoga neapolitana DSM 4359] gi|254789185|sp|B9KAP3|TRMFO_THENN RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|221573214|gb|ACM24026.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gid [Thermotoga neapolitana DSM 4359] Length = 435 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 33/84 (39%), Positives = 40/84 (47%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + I+ IP L I+R G YIN P+ L P KK +F AG Sbjct: 277 GFQTRLKWGEQKKVIQKIPCLRNAEIVRYGVMHRNIYINSPRVLDPFFRLKKHPSVFFAG 336 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 QI G GY E+AA G+ N R Sbjct: 337 QITGVEGYMESAASGIYVAYNVYR 360 >gi|313665486|ref|YP_004047357.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Mycoplasma leachii PG50] gi|312949558|gb|ADR24154.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Mycoplasma leachii PG50] Length = 423 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 1/87 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT-LETKKISGLFLAG 367 T L Q + IPGLE + I+R G + +YIN K+L ++ K +F AG Sbjct: 267 NFQTNLMWNEQLKVFSLIPGLENLKIMRYGVMHKNNYINTKKLLNLGVQLKTHKNIFFAG 326 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSN 394 QI G GY E+ GL+ IN R N Sbjct: 327 QIIGVDGYVESVCSGLITAINLDRYLN 353 >gi|26006777|sp|Q9RXU7|TRMFO_DEIRA RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase Length = 465 Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q ++ IPGL +I+R G Y+N P+ L TL+ + +AG Sbjct: 278 GFQTGLKWGDQKAVVQLIPGLHNADIVRYGVMHRNTYLNAPEVLDSTLQLRADPQKLVAG 337 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 + GT GY E++A G +AG N+AR + L+ + +S +G ++ L S Sbjct: 338 VLAGTEGYLESSATGWLAGTNAARLALGLEPLT-PPAESMLGGLVRYLAS 386 >gi|319405546|emb|CBI79165.1| gid-family protein [Bartonella sp. AR 15-3] Length = 460 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 39/114 (34%), Positives = 54/114 (47%), Gaps = 2/114 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLEK R G Y+N P L +L K+ L AG Sbjct: 291 GFQTKLKYSEQTRIFRMIPGLEKAEFARLGGLHRNTYLNSPILLDESLRLKQKPQLRFAG 350 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 QI G GY E+AA GL+AG +A + N C + G +++ +T ++ Sbjct: 351 QITGCEGYIESAAIGLLAGRFAAAEYNH-ACPSLPPKTTAFGALLNHITGGHIV 403 >gi|303231425|ref|ZP_07318156.1| tRNA:M(5)U-54 methyltransferase [Veillonella atypica ACS-049-V-Sch6] gi|302513862|gb|EFL55873.1| tRNA:M(5)U-54 methyltransferase [Veillonella atypica ACS-049-V-Sch6] Length = 438 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 35/97 (36%), Positives = 44/97 (45%), Gaps = 1/97 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF-PTLETKKISGLFLAG 367 G T L Q + IPGLE IR G YIN EL + + LF AG Sbjct: 280 GFQTHLKWGEQKRVFGLIPGLENAEFIRYGVMHRNTYINSPELLNHAFQLQSDHRLFFAG 339 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT 404 Q+ G GY E+AA GL+ G+ R + I F +T Sbjct: 340 QMTGVEGYLESAASGLMVGLQVKRYLDDNAFINFPKT 376 >gi|237757173|ref|ZP_04585596.1| tRNA:M(5)U-54 methyltransferase [Sulfurihydrogenibium yellowstonense SS-5] gi|237690664|gb|EEP59849.1| tRNA:M(5)U-54 methyltransferase [Sulfurihydrogenibium yellowstonense SS-5] Length = 438 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 5/156 (3%) Query: 270 YGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGL 329 YGP + D + G+R + L E + ++ G T L Q + IP L Sbjct: 240 YGPMKPVGLIDP--KTGKRPYAVVQLRKENIEGTLLSLVGFQTKLKYPEQKRIFSLIPAL 297 Query: 330 EKVNIIRPGYAIEYDYINPKELF-PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGIN 388 + ++ G +I ++L PTL+ ++ + AGQI G GY +AA G++AGIN Sbjct: 298 KDAEFVKLGSIHRNTFIQSQKLLKPTLQLREKPNILFAGQITGVEGYMASAATGIIAGIN 357 Query: 389 SARKSNKLDCICFSRTDSYIGVMIDDLTS-KGVLEP 423 R + + +T + IG +I+ +T+ K L+P Sbjct: 358 VVRMLEGKEPVIPPKT-TMIGGLINYITTAKNELQP 392 >gi|225849723|ref|YP_002729957.1| tRNA (uracil-5-)-methyltransferase Gid [Persephonella marina EX-H1] gi|254789175|sp|C0QTE2|TRMFO_PERMH RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|225645289|gb|ACO03475.1| tRNA:M(5)U-54 methyltransferase [Persephonella marina EX-H1] Length = 436 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/111 (30%), Positives = 49/111 (44%), Gaps = 11/111 (9%) Query: 282 IVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAI 341 +++ + N L G T + YP Q + R IP L+ +R G Sbjct: 262 VIQLRKENREGTLLSLVGFQTKLKYPE----------QKRIFRLIPALKDATFVRLGSIH 311 Query: 342 EYDYINPKELF-PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSAR 391 +I + PTL+ KK + AGQI G GY +AA G++AGIN R Sbjct: 312 RNTFIQSHRVLKPTLQLKKDPRILFAGQITGVEGYAASAATGILAGINVVR 362 >gi|319898781|ref|YP_004158874.1| gid-family protein [Bartonella clarridgeiae 73] gi|319402745|emb|CBI76292.1| gid-family protein [Bartonella clarridgeiae 73] Length = 456 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 52/109 (47%), Gaps = 2/109 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLEK R G Y+N P L +L K+ L AG Sbjct: 287 GFQTKLKYSEQTRIFRMIPGLEKAEFARLGGLHRNTYLNSPILLDESLRLKQKPQLRFAG 346 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 QI G GY E+AA GL+AG +A + N C + G +++ +T Sbjct: 347 QITGCEGYIESAAIGLLAGRFAAAEYNHA-CPSLPPKTTAFGALLNHIT 394 >gi|319404103|emb|CBI77693.1| gid-family protein [Bartonella rochalimae ATCC BAA-1498] Length = 459 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 52/109 (47%), Gaps = 2/109 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLEK R G Y+N P L +L K+ L AG Sbjct: 291 GFQTKLKYSEQTRIFRMIPGLEKAEFARLGGLHRNTYLNSPILLDESLRLKQKPQLRFAG 350 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 QI G GY E+AA GL+AG +A + N C + G +++ +T Sbjct: 351 QITGCEGYIESAAIGLLAGRFAAAEYNHA-CPSLPPKTTAFGALLNHIT 398 >gi|291320082|ref|YP_003515340.1| glucose inhibited division protein [Mycoplasma agalactiae] gi|290752411|emb|CBH40382.1| Glucose inhibited division protein [Mycoplasma agalactiae] Length = 427 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 1/105 (0%) Query: 293 IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKE-L 351 + L + N + + T++ Q++ I+ + L I+R G + DY+N L Sbjct: 255 VLLREDDYNENFLRIVNFQTSIKIPWQNEIIKAVSALANALILRYGVMHKNDYLNSANVL 314 Query: 352 FPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKL 396 + + K +F AGQ+ GT GY EA+A ++ IN R N L Sbjct: 315 YDNFQLKSNPNIFFAGQLTGTDGYVEASASAIICAINVDRYLNNL 359 >gi|94498570|ref|ZP_01305125.1| putative glucose-inhibited division protein (gid) [Sphingomonas sp. SKA58] gi|94422013|gb|EAT07059.1| putative glucose-inhibited division protein (gid) [Sphingomonas sp. SKA58] Length = 447 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/79 (43%), Positives = 41/79 (51%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + RTIPGLEK R G +I +PK L TL K + AG Sbjct: 289 GFQTKLKHGAQVELFRTIPGLEKAEFARLGGLHRNTFIQSPKLLDATLRLKSAPHIRFAG 348 Query: 368 QINGTTGYEEAAAQGLVAG 386 Q+ G GY E+AA GL+AG Sbjct: 349 QMTGCEGYVESAAIGLLAG 367 >gi|294011442|ref|YP_003544902.1| glucose inhibited division protein Gid [Sphingobium japonicum UT26S] gi|292674772|dbj|BAI96290.1| glucose inhibited division protein Gid [Sphingobium japonicum UT26S] Length = 445 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/79 (43%), Positives = 41/79 (51%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + RTIPGLEK R G +I +PK L TL K + AG Sbjct: 287 GFQTKLKHGAQVELFRTIPGLEKAEFARLGGLHRNTFIQSPKLLDGTLRLKSAPHIRFAG 346 Query: 368 QINGTTGYEEAAAQGLVAG 386 Q+ G GY E+AA GL+AG Sbjct: 347 QVTGCEGYVESAAIGLLAG 365 >gi|226355403|ref|YP_002785143.1| tRNA (uracil-5-)-methyltransferase Gid [Deinococcus deserti VCD115] gi|226317393|gb|ACO45389.1| putative tRNA uridine 5-carboxymethylaminomethyl modification enzyme (glucose inhibited division protein) [Deinococcus deserti VCD115] Length = 462 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 32/84 (38%), Positives = 43/84 (51%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE I+R G Y+N P+ L TL+ + +AG Sbjct: 280 GFQTGLKWGDQKAVVSLIPGLENAEIVRYGVMHRNTYLNAPEVLNATLQLRADPTKLVAG 339 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 + GT GY E+A G +AG N+AR Sbjct: 340 VLAGTEGYLESAGTGWLAGTNAAR 363 Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust. Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 27/162 (16%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTAL---------ITHKTSTIGSMSCNPAIGGLG---- 54 + VIG G AG EAA AA+LG L H+++ + C+ ++GG G Sbjct: 8 ITVIGAGLAGSEAALAAARLGVRVRLHEMRPTRMTPAHRSANFAELVCSNSLGGEGEKQS 67 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 KG L E+ ++ G + ADA+ + PA G +R+ + + R I Sbjct: 68 KGLLQAELRSVGGAVVTAADASRL----------PA--GNALAVERDEFSARVTRTIREH 115 Query: 115 ENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGT 156 ++VI+GEVA +I+S + +++ + V TG+ Sbjct: 116 PLIEVIEGEVAAVPAGIAVIASGPLTSDAL--AADVARLTGS 155 >gi|328954305|ref|YP_004371639.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO [Desulfobacca acetoxidans DSM 11109] gi|328454629|gb|AEB10458.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO [Desulfobacca acetoxidans DSM 11109] Length = 435 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 2/113 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + +R +PGLE+ R G +I+ P L L LFL G Sbjct: 280 GFQTRLKYGEQRRVLRLLPGLEQAEFARLGSVHRNTFIHSPGLLTRFLNFAARPQLFLGG 339 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 QI G GY E+ A G +AG+N+AR + + + ++ +G ++ +T+ V Sbjct: 340 QITGVEGYLESTAMGWLAGVNAARLARQQPLLS-PPPETAMGALVRHITNTEV 391 >gi|16126835|ref|NP_421399.1| tRNA (uracil-5-)-methyltransferase Gid [Caulobacter crescentus CB15] gi|221235617|ref|YP_002518054.1| tRNA (uracil-5-)-methyltransferase Gid [Caulobacter crescentus NA1000] gi|26006774|sp|Q9A566|TRMFO_CAUCR RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|13424169|gb|AAK24567.1| GidA family protein [Caulobacter crescentus CB15] gi|220964790|gb|ACL96146.1| glucose inhibited division protein A [Caulobacter crescentus NA1000] Length = 474 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 41/117 (35%), Positives = 56/117 (47%), Gaps = 7/117 (5%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L +Q + R IPGLE R G +IN PK L +L K L AG Sbjct: 303 GFQTKLKHGVQAETFRMIPGLEDAQFARLGGLHRNTFINSPKLLDKSLRMKAQPRLRFAG 362 Query: 368 QINGTTGYEEAAAQGLVAGINSA--RKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 Q+ G GY E+AA GL+ G +A RK +D + +G +++ +T G LE Sbjct: 363 QVTGVEGYVESAAMGLLTGRFAAADRKGAPIDA---PPPTTALGALVEHITG-GHLE 415 >gi|283853638|ref|ZP_06370872.1| gid protein [Desulfovibrio sp. FW1012B] gi|283570971|gb|EFC18997.1| gid protein [Desulfovibrio sp. FW1012B] Length = 439 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 53/182 (29%), Positives = 75/182 (41%), Gaps = 20/182 (10%) Query: 269 SYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPG 328 ++GP + D R G R + L PE + G T L Q + R IP Sbjct: 244 TFGPMKPVGLTDP--RTGRRPYAVVQLRPENAAKSTLNLVGFQTKLAYGEQERVFRLIPA 301 Query: 329 LEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGI 387 L R G ++N PK L LE G++LAGQI G GY E+AA GL G Sbjct: 302 LHAAEFTRLGSIHRNTFVNAPKVLNDRLELVARPGVYLAGQITGVEGYVESAACGLWLGT 361 Query: 388 N-SARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRL 446 AR + L+ I ++ +G ++ L + P + F +P N + L Sbjct: 362 QLGARIARGLN-IAPPPVEAALGALLGHLRT-----PAKKF----------QPSNVNFGL 405 Query: 447 TP 448 TP Sbjct: 406 TP 407 Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust. Identities = 29/119 (24%), Positives = 55/119 (46%), Gaps = 1/119 (0%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALD 66 + +IGGG AGCE A A+ G ++ + K + +P + L + +R + + Sbjct: 2 SIAIIGGGLAGCECALALARAGVASTVFEAKPARFSPAHVSPQLAELVCSNSLRSDEPVT 61 Query: 67 GLMGRVADAAGIQFRVLNVKKGPAVRGPRTQA-DRELYRLAMQREILSQENLDVIQGEV 124 + + A + V+ V + AV + A DREL+ AM I ++ + + + E+ Sbjct: 62 AVGLLKVEMAALGSAVIAVARETAVPAGKALAVDRELFAAAMTARIEAEPLVTLTRQEI 120 >gi|319407117|emb|CBI80754.1| gid-family protein [Bartonella sp. 1-1C] Length = 459 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 52/109 (47%), Gaps = 2/109 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLEK R G Y+N P L +L K+ L AG Sbjct: 291 GFQTKLKYSEQTRIFRMIPGLEKAAFARLGGLHRNTYLNSPILLDESLRLKQKPQLRFAG 350 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 QI G GY E+AA GL+AG +A + N C + G +++ +T Sbjct: 351 QITGCEGYIESAAIGLLAGRFAAAEYNHA-CPSLPPKTTAFGALLNHIT 398 >gi|291542639|emb|CBL15749.1| tRNA:m(5)U-54 methyltransferase [Ruminococcus bromii L2-63] Length = 435 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 48/104 (46%), Gaps = 2/104 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IP L + +R G +++ P+ L K LF AG Sbjct: 279 GFQTNLKFPEQKRVFSLIPALHNADFVRYGVMHRNTFLDSPRILNSDFSVKDNHSLFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 QI G GY E+AA G++AGIN+ R + I D+ IG + Sbjct: 339 QITGVEGYMESAASGIMAGINACRVAEGKSTITLP-NDTMIGAL 381 >gi|295688524|ref|YP_003592217.1| gid protein [Caulobacter segnis ATCC 21756] gi|295430427|gb|ADG09599.1| gid protein [Caulobacter segnis ATCC 21756] Length = 475 Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 38/111 (34%), Positives = 53/111 (47%), Gaps = 6/111 (5%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L +Q + R IPGLE R G +IN PK L +L K L AG Sbjct: 303 GFQTKLKHGVQAETFRMIPGLENAQFARLGGLHRNTFINSPKLLDKSLRMKAQPRLRFAG 362 Query: 368 QINGTTGYEEAAAQGLVAGINSA--RKSNKLDCICFSRTDSYIGVMIDDLT 416 Q+ G GY E+AA GL+ G +A RK +D + +G +++ +T Sbjct: 363 QVTGVEGYVESAAMGLLTGRFAAADRKGAPIDA---PPPTTALGALVEHIT 410 >gi|46202952|ref|ZP_00052330.2| COG1206: NAD(FAD)-utilizing enzyme possibly involved in translation [Magnetospirillum magnetotacticum MS-1] Length = 507 Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 35/79 (44%), Positives = 41/79 (51%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + RTIPGLEK R G Y++ P+ L TL K L AG Sbjct: 321 GFQTKLRHAEQVRVFRTIPGLEKAEFARLGGLHRNTYLDSPRLLDATLRLKARPSLRFAG 380 Query: 368 QINGTTGYEEAAAQGLVAG 386 QI G GY E+AA GL+AG Sbjct: 381 QITGCEGYVESAAVGLMAG 399 >gi|254420020|ref|ZP_05033744.1| tRNA:m(5)U-54 methyltransferase [Brevundimonas sp. BAL3] gi|196186197|gb|EDX81173.1| tRNA:m(5)U-54 methyltransferase [Brevundimonas sp. BAL3] Length = 464 Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 3/115 (2%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L +Q + R IPGL+ R G Y+N P+ L L K + L AG Sbjct: 295 GFQTKLKHGVQAEVFRMIPGLQNAQFARLGGLHRNTYLNSPQLLDKQLRLKAMPRLRFAG 354 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 Q+ G GY E+AA GL+ G +A ++ D + ++ +G +++ +T G LE Sbjct: 355 QVTGVEGYVESAAMGLLTGRLAAAQALGRD-VSAPPPETAMGALVEHITG-GHLE 407 >gi|75908696|ref|YP_322992.1| tRNA (uracil-5-)-methyltransferase Gid [Anabaena variabilis ATCC 29413] gi|123609418|sp|Q3MA89|TRMFO_ANAVT RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|75702421|gb|ABA22097.1| Gid protein [Anabaena variabilis ATCC 29413] Length = 438 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 50/153 (32%), Positives = 74/153 (48%), Gaps = 4/153 (2%) Query: 266 DIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRT 325 D YGP + D R GER + L E + G T L Q + + Sbjct: 240 DTMRYGPVKPVGLSDS--RTGERPYAVVQLRQEDKAGQLWNMVGFQTNLRWGEQKRVFQM 297 Query: 326 IPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLV 384 IPGLEK +R G +IN P+ + PTL+ K+ L AGQ+ GT GY AAA G + Sbjct: 298 IPGLEKAEFVRLGVMHRNTFINAPQLMLPTLQFKQRPTLLAAGQLIGTEGYTAAAAGGWL 357 Query: 385 AGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 AG N+AR + + + T + +G +++ ++S Sbjct: 358 AGTNAARLALGKEPLALPPT-TMLGALLEFISS 389 >gi|17232063|ref|NP_488611.1| tRNA (uracil-5-)-methyltransferase Gid [Nostoc sp. PCC 7120] gi|26006767|sp|Q8YNJ4|TRMFO_NOSS1 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|17133707|dbj|BAB76270.1| glucose-inhibited division protein [Nostoc sp. PCC 7120] Length = 438 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 50/153 (32%), Positives = 74/153 (48%), Gaps = 4/153 (2%) Query: 266 DIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRT 325 D YGP + D R GER + L E + G T L Q + + Sbjct: 240 DTMRYGPVKPVGLSDS--RTGERPYAVVQLRQEDKAGQLWNMVGFQTNLRWGEQKRVFQM 297 Query: 326 IPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLV 384 IPGLEK +R G +IN P+ + PTL+ K+ L AGQ+ GT GY AAA G + Sbjct: 298 IPGLEKAEFVRLGVMHRNTFINAPQLMLPTLQFKQRPTLLAAGQLIGTEGYTAAAAGGWL 357 Query: 385 AGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 AG N+AR + + + T + +G +++ ++S Sbjct: 358 AGTNAARLALGKEPLALPPT-TMLGALLEFISS 389 >gi|296284147|ref|ZP_06862145.1| tRNA (uracil-5-)-methyltransferase Gid [Citromicrobium bathyomarinum JL354] Length = 455 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 39/118 (33%), Positives = 55/118 (46%), Gaps = 2/118 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + RTIPGLE R G +IN P L L K + + AG Sbjct: 295 GFQTKLKYGAQVELFRTIPGLENAEFARLGGLHRNTFINSPLVLDRQLRLKNAAHIRFAG 354 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 QI G GY E++A GL+AG+ A + D RT + +G ++ +T E ++ Sbjct: 355 QITGCEGYVESSAIGLLAGLMVAAEHRGEDWSPPPRT-TALGALLSHVTGDAEAETFQ 411 >gi|85859216|ref|YP_461418.1| tRNA (uracil-5-)-methyltransferase Gid [Syntrophus aciditrophicus SB] gi|123516460|sp|Q2LT41|TRMFO_SYNAS RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|85722307|gb|ABC77250.1| glucose inhibited division protein A [Syntrophus aciditrophicus SB] Length = 441 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 2/109 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGL R G +IN P L TL+ K +F AG Sbjct: 282 GFQTKLTWTEQRRIFRMIPGLGNAEFARYGSIHRNTFINSPALLEKTLQLKTAEHIFFAG 341 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 QI G GY E+ A GL+AG+ S + +K ++ +G +++ +T Sbjct: 342 QITGVEGYIESTAMGLMAGL-SVSEFHKGKSFLPPPPETAMGALLNHIT 389 >gi|170740726|ref|YP_001769381.1| tRNA (uracil-5-)-methyltransferase Gid [Methylobacterium sp. 4-46] gi|205830310|sp|B0UI96|TRMFO_METS4 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|168195000|gb|ACA16947.1| gid protein [Methylobacterium sp. 4-46] Length = 473 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 40/113 (35%), Positives = 53/113 (46%), Gaps = 2/113 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + RTIPGLE+ R G Y++ P+ L TL K L AG Sbjct: 291 GFQTKLRHAEQVRIFRTIPGLERAEFARLGGLHRNTYLDSPRLLDATLRLKAAPRLRFAG 350 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 QI G GY E+AA GL+AG +A + T + +G +I +T V Sbjct: 351 QITGCEGYVESAAVGLMAGRYAAAERRGRALAPLPPTTA-LGALIAHITGGHV 402 >gi|15965296|ref|NP_385649.1| tRNA (uracil-5-)-methyltransferase Gid [Sinorhizobium meliloti 1021] gi|307307886|ref|ZP_07587611.1| gid protein [Sinorhizobium meliloti BL225C] gi|26006769|sp|Q92Q15|TRMFO_RHIME RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|15074476|emb|CAC46122.1| NAD(FAD)-utilizing enzyme [Sinorhizobium meliloti 1021] gi|306901502|gb|EFN32105.1| gid protein [Sinorhizobium meliloti BL225C] Length = 472 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 38/114 (33%), Positives = 55/114 (48%), Gaps = 2/114 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGL+ R G YIN P L +L K GL AG Sbjct: 294 GFQTKLKYGAQGEVFRMIPGLQNAEFARLGGLHRNTYINSPTLLDHSLTLKSRPGLRFAG 353 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 QI G GY E+A+ GL+AG +A + + + T ++ G ++D +T ++ Sbjct: 354 QITGCEGYVESASIGLLAGRFAAAERKGVSPVLPPVTTAF-GALLDHITGGHIV 406 >gi|332710062|ref|ZP_08430017.1| tRNA:m(5)U-54 methyltransferase [Lyngbya majuscula 3L] gi|332351205|gb|EGJ30790.1| tRNA:m(5)U-54 methyltransferase [Lyngbya majuscula 3L] Length = 474 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 42/110 (38%), Positives = 58/110 (52%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF-PTLETKKISGLFLAG 367 G T L Q + R IPGLE+ +R G ++N EL PTL+ KK S L AG Sbjct: 293 GFQTNLRWGEQKRVFRLIPGLEEAEFVRMGVMHRNTFLNAPELLQPTLQFKKRSTLLAAG 352 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ GT Y AAA G +AG N+AR L+ + T + +G + D ++S Sbjct: 353 QLVGTESYTAAAAGGWLAGTNAARLVLGLELVTMPPT-TMMGALFDFISS 401 >gi|186684313|ref|YP_001867509.1| tRNA (uracil-5-)-methyltransferase Gid [Nostoc punctiforme PCC 73102] gi|186466765|gb|ACC82566.1| gid protein [Nostoc punctiforme PCC 73102] Length = 452 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 50/153 (32%), Positives = 74/153 (48%), Gaps = 4/153 (2%) Query: 266 DIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRT 325 D YGP + D R GER + L E + G T L Q + + Sbjct: 254 DTMRYGPLKPVGLSD--TRTGERPYAVVQLRQEDKVGQLWNMVGFQTNLRWGEQKRIFQL 311 Query: 326 IPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLV 384 IP LEK +R G +IN P+ + PTL+ K+ L AGQ+ GT GY AAA G + Sbjct: 312 IPSLEKAEFVRLGVMHRNTFINAPQLMHPTLQFKECPTLLAAGQLIGTEGYTAAAAGGCL 371 Query: 385 AGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 AGIN+AR + + + T + +G +++ ++S Sbjct: 372 AGINAARLALGKEALVLPPT-TMMGALLEFISS 403 >gi|108805133|ref|YP_645070.1| tRNA (uracil-5-)-methyltransferase Gid [Rubrobacter xylanophilus DSM 9941] gi|123068948|sp|Q1ATM0|TRMFO_RUBXD RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|108766376|gb|ABG05258.1| gid protein [Rubrobacter xylanophilus DSM 9941] Length = 447 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 39/122 (31%), Positives = 57/122 (46%), Gaps = 10/122 (8%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG------ 362 G T L Q + R IPGL++ R G Y+ + T KI Sbjct: 276 GFQTRLRWGEQKRVFRMIPGLQRAEFARFGVMHRNTYLPSNRMLEA--TMKIRNALSERP 333 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK-GVL 421 LF AGQ+ G GY E+ A G +AG N+AR + L+ I + + +G + +T+K G L Sbjct: 334 LFFAGQLTGVEGYVESTAMGYIAGTNAARVARGLEPIRWPE-GTMMGALARYITTKEGTL 392 Query: 422 EP 423 +P Sbjct: 393 QP 394 Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 63/153 (41%), Gaps = 25/153 (16%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGG----L 53 DV V+GGG AG EAA AA+ G L H T + C+ ++G Sbjct: 3 DVTVVGGGLAGSEAAWQAARAGCRVELWEMRPVKETPAHHTDLFAELVCSNSLGNRSPET 62 Query: 54 GKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILS 113 G L E+ L ++ R ADA + PA G RE + A+ + S Sbjct: 63 ASGLLKEELRRLGSVILRCADANAV----------PA--GGALGVAREDFARAVTETVGS 110 Query: 114 QENLDVIQGEVAGFNTEKNIISSIVMQDNSMIR 146 N++V++ E +I++ + +++ R Sbjct: 111 HPNIEVVRREARDIPEGPAVIATGPLTSDALHR 143 >gi|83593092|ref|YP_426844.1| tRNA (uracil-5-)-methyltransferase Gid [Rhodospirillum rubrum ATCC 11170] gi|123526577|sp|Q2RTI8|TRMFO_RHORT RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|83576006|gb|ABC22557.1| Gid protein [Rhodospirillum rubrum ATCC 11170] Length = 482 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 34/79 (43%), Positives = 40/79 (50%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE R G ++N P+ L PTL K L AG Sbjct: 286 GFQTKLKHGEQARIFRMIPGLENAEFARLGGIHRNTFLNSPRLLDPTLRLKARPHLRFAG 345 Query: 368 QINGTTGYEEAAAQGLVAG 386 QI G GY E+AA GL+AG Sbjct: 346 QITGCEGYVESAAIGLLAG 364 >gi|307292642|ref|ZP_07572488.1| gid protein [Sphingobium chlorophenolicum L-1] gi|306880708|gb|EFN11924.1| gid protein [Sphingobium chlorophenolicum L-1] Length = 445 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 33/79 (41%), Positives = 40/79 (50%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + RTIPGLEK R G +I +PK L TL K + AG Sbjct: 287 GFQTKLKHGAQTELFRTIPGLEKAEFARLGGLHRNTFIQSPKLLDATLRLKSAPHIRFAG 346 Query: 368 QINGTTGYEEAAAQGLVAG 386 Q+ G GY E+ A GL+AG Sbjct: 347 QVTGCEGYVESGAIGLLAG 365 >gi|83319831|ref|YP_424581.1| tRNA (uracil-5-)-methyltransferase Gid [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|123535603|sp|Q2SRN2|TMFO2_MYCCT RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO 2; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase 2; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase 2 gi|83283717|gb|ABC01649.1| glucose-inhibited division protein, putative [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 423 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 1/87 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT-LETKKISGLFLAG 367 T L Q + IPGLE + I++ G + +YIN K+L ++ K +F AG Sbjct: 267 NFQTNLMWNEQLKVFSLIPGLENLKIMKYGVMHKNNYINTKKLLNLGVQLKTNKNIFFAG 326 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSN 394 QI G GY E+ GL++ IN R N Sbjct: 327 QIIGVDGYVESVCSGLISAINLDRYLN 353 >gi|302383721|ref|YP_003819544.1| gid protein [Brevundimonas subvibrioides ATCC 15264] gi|302194349|gb|ADL01921.1| gid protein [Brevundimonas subvibrioides ATCC 15264] Length = 465 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 38/111 (34%), Positives = 52/111 (46%), Gaps = 6/111 (5%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGL+ R G Y+N P+ L L K + L AG Sbjct: 296 GFQTKLKHGAQAEVFRMIPGLQNAQFARLGGLHRNTYLNSPQLLDRQLRMKAMPRLRFAG 355 Query: 368 QINGTTGYEEAAAQGLVAGINSA--RKSNKLDCICFSRTDSYIGVMIDDLT 416 Q+ G GY E+AA GL+AG +A R LD + IG +++ +T Sbjct: 356 QVTGVEGYVESAATGLLAGRLAAAERLGKPLDAPA---AHTAIGALVEHIT 403 >gi|120601959|ref|YP_966359.1| tRNA (uracil-5-)-methyltransferase Gid [Desulfovibrio vulgaris DP4] gi|205830332|sp|A1VBW6|TRMFO_DESVV RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|120562188|gb|ABM27932.1| gid protein [Desulfovibrio vulgaris DP4] Length = 482 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 58/231 (25%), Positives = 96/231 (41%), Gaps = 25/231 (10%) Query: 284 RFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEY 343 R G R I L E N G T L Q + R IPGL +R G Sbjct: 262 RTGTRPYAIIQLRAENRNKTAFNIVGCQTKLKYAEQERVFRMIPGLAGAEFVRHGSVHRN 321 Query: 344 DYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFS 402 Y+N P+ L L + +FLAGQI G GY E+AA G+ G+ A + + + Sbjct: 322 TYVNAPRVLADDLSLRADKRVFLAGQITGVEGYVESAACGMWLGMVLAARIQGRE-LPTP 380 Query: 403 RTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTP-IGMKL------GC 455 + +G ++ L + P + F +P NA+ L P +G+K+ Sbjct: 381 PPQTALGALLMHLRT-----PVKNF----------QPSNANFGLMPELGLKVKKRERKPL 425 Query: 456 IGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFKQDGKTRTAYE 506 R ++ F +++ E + +++ L+ T+ + + + + G T A E Sbjct: 426 YSARAREHFVRWLAEAG-VTPVIEPLLPTAPDAADATGAIDTTGATGAARE 475 >gi|325294324|ref|YP_004280838.1| methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO [Desulfurobacterium thermolithotrophum DSM 11699] gi|325064772|gb|ADY72779.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO [Desulfurobacterium thermolithotrophum DSM 11699] Length = 436 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 48/160 (30%), Positives = 74/160 (46%), Gaps = 15/160 (9%) Query: 282 IVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAI 341 +V+ + N L G T + YP Q + R IPGLE R G Sbjct: 262 VVQLRKENKEGTLLNLVGFQTKLKYPE----------QKRVFRLIPGLENAEFARFGSIH 311 Query: 342 EYDYI-NPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCIC 400 +I +PK L TL+ KK +F AGQI G GY E+AA G++AGIN+ + + + + Sbjct: 312 RNTFIKSPKLLLKTLQLKKNPKVFFAGQITGVEGYPESAATGIIAGINAVKLAEGKELV- 370 Query: 401 FSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPD 440 + + IG ++ +T+ +P A + I L P+ Sbjct: 371 YPPETTMIGALLKYITTA---DPKTFQPMNANFGILLPPE 407 Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust. Identities = 38/128 (29%), Positives = 56/128 (43%), Gaps = 25/128 (19%) Query: 10 VIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGG----LGKG 56 VIG G AG EAA A G L HKTS + C+ +GG +G Sbjct: 7 VIGAGLAGVEAAYKVANKGHKVRLFEMRPKKTTPAHKTSLFAELVCSNTLGGKEVTTPRG 66 Query: 57 HLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQEN 116 L E++ L+ L + +AA R V G A+ DRE + + +I + N Sbjct: 67 LLKAEMELLNSL---IVEAA----RKTEVPAGGAL-----AVDREKFAEYITEKIENHPN 114 Query: 117 LDVIQGEV 124 ++V++ EV Sbjct: 115 IEVVREEV 122 >gi|114797503|ref|YP_761447.1| tRNA (uracil-5-)-methyltransferase Gid [Hyphomonas neptunium ATCC 15444] gi|123027764|sp|Q0BYJ6|TRMFO_HYPNA RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|114737677|gb|ABI75802.1| gid protein [Hyphomonas neptunium ATCC 15444] Length = 467 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 33/79 (41%), Positives = 39/79 (49%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q R IPGLEK R G ++N PK L L K + L AG Sbjct: 290 GFQTKLKYAAQTDIFRMIPGLEKAEFARLGGIHRNTFLNSPKLLDRQLRMKSMPRLRFAG 349 Query: 368 QINGTTGYEEAAAQGLVAG 386 Q+ G GY E+AA GL+AG Sbjct: 350 QVTGVEGYVESAAMGLLAG 368 >gi|325677874|ref|ZP_08157516.1| tRNA:m(5)U-54 methyltransferase [Ruminococcus albus 8] gi|324110428|gb|EGC04602.1| tRNA:m(5)U-54 methyltransferase [Ruminococcus albus 8] Length = 442 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 42/140 (30%), Positives = 60/140 (42%), Gaps = 3/140 (2%) Query: 266 DIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRT 325 D +GP + D R G+R + L E + G T L Q + Sbjct: 242 DTLRFGPLKPVGLTDP--RTGKRPWAVVQLRAENTAGSMYNLVGFQTNLKFGEQKRVFSM 299 Query: 326 IPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLV 384 IPGLE +R G +IN PK L ++ L+ AGQ+ G GY E+AA G+ Sbjct: 300 IPGLENAEFMRYGVMHRNTFINSPKLLNEQFNMRQRPELYFAGQMTGVEGYIESAASGIF 359 Query: 385 AGINSARKSNKLDCICFSRT 404 AG++ AR+ L + T Sbjct: 360 AGLSLARQMRGLAPVSLPAT 379 >gi|220922176|ref|YP_002497477.1| tRNA (uracil-5-)-methyltransferase Gid [Methylobacterium nodulans ORS 2060] gi|219946782|gb|ACL57174.1| gid protein [Methylobacterium nodulans ORS 2060] Length = 473 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 36/83 (43%), Positives = 43/83 (51%), Gaps = 1/83 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + RTIPGLEK R G Y++ P+ L TL K L AG Sbjct: 291 GFQTKLRHAEQVRIFRTIPGLEKAEFARLGGLHRNTYLDSPRLLDATLRLKADPRLRFAG 350 Query: 368 QINGTTGYEEAAAQGLVAGINSA 390 QI G GY E+AA GL+AG +A Sbjct: 351 QITGCEGYVESAAVGLMAGRYAA 373 >gi|170287998|ref|YP_001738236.1| gid protein [Thermotoga sp. RQ2] gi|205830347|sp|B1L7X2|TRMFO_THESQ RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|170175501|gb|ACB08553.1| gid protein [Thermotoga sp. RQ2] Length = 435 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 33/84 (39%), Positives = 39/84 (46%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + +R IP L I+R G YIN PK L KK +F AG Sbjct: 277 GFQTRLKWSEQKRVLRKIPCLRNAEIVRYGVMHRNVYINSPKLLDIFFRLKKHPNIFFAG 336 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 QI G GY E+AA G+ N R Sbjct: 337 QITGVEGYMESAASGIYVAYNVHR 360 >gi|298292207|ref|YP_003694146.1| gid protein [Starkeya novella DSM 506] gi|296928718|gb|ADH89527.1| gid protein [Starkeya novella DSM 506] Length = 476 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 32/73 (43%), Positives = 40/73 (54%), Gaps = 1/73 (1%) Query: 319 QHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEE 377 Q + R IPGLEK R G Y+N PK L TL + L AGQI G GY E Sbjct: 302 QTRLFRMIPGLEKAEFARLGGLHRNTYLNSPKLLDTTLRLRAEPRLRFAGQITGCEGYVE 361 Query: 378 AAAQGLVAGINSA 390 ++A GL+AG+ +A Sbjct: 362 SSAMGLMAGLFAA 374 >gi|320108819|ref|YP_004184409.1| gid protein [Terriglobus saanensis SP1PR4] gi|319927340|gb|ADV84415.1| gid protein [Terriglobus saanensis SP1PR4] Length = 448 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 1/73 (1%) Query: 319 QHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEE 377 Q + +R IPGLE +R G YI+ P L TL+ K+ + +AGQ++G GY E Sbjct: 291 QQRILRLIPGLENATFLRYGQIHRNTYIHAPSLLTETLQLKQHPNILIAGQLSGVEGYTE 350 Query: 378 AAAQGLVAGINSA 390 + A G++AG +A Sbjct: 351 SIASGMLAGRYAA 363 >gi|42524778|ref|NP_970158.1| tRNA (uracil-5-)-methyltransferase Gid [Bdellovibrio bacteriovorus HD100] gi|81616190|sp|Q6MHW5|TRMFO_BDEBA RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|39576988|emb|CAE78217.1| glucose-inhibited division protein [Bdellovibrio bacteriovorus HD100] Length = 440 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 103/420 (24%), Positives = 149/420 (35%), Gaps = 99/420 (23%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGG 52 I ++ + V+G G AG E A A +G S L HKT + C+ + G Sbjct: 4 ITQNQKITVVGAGLAGSECALQLADMGYSVVLYEMRDKTMTPAHKTHKFAELVCSNSFGS 63 Query: 53 LGK----GHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQ 108 LG+ G L E L+ + + A A + P QA L M Sbjct: 64 LGEHSAPGQLKWEAKKLNSHILQAAFEAQV---------------PAGQA------LGMD 102 Query: 109 REILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLK 168 RE+ S I E + I + +V N + R + V+ TG Sbjct: 103 REVFS-----AIMTEKVKNHPNIEIRNDVVKSLNDIPRPA--VIATGPLTHD-------- 147 Query: 169 IPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSF 228 + +S + F+ F FD +D +I TE + +R Sbjct: 148 ----DLAESMRQHFGDEFLYF-FD------AIAPIIDADSI---NTEIAWKADRY----- 188 Query: 229 MTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGP-RYCPSIE------DK 281 DK T C + + E +R I E K I D ++ C IE + Sbjct: 189 --DKGTGDYYNCPMNKE--EYNRFIEEIQKARKIEPKDFETTDFFEGCMPIEVMVDRGPQ 244 Query: 282 IVRFGE---------RNGHQIFL-------EPEGLNTDVVYPNGISTALPEEIQHQFIRT 325 +RFG R G + EG ++V G T + Q + R Sbjct: 245 TLRFGPMKPIGLDDPRTGRYPWAVVQLRQDNKEGTAYNMV---GFQTRMAYGEQVRVFRM 301 Query: 326 IPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLV 384 IPGLE ++ G +IN PK L L +K LF AGQI G GY E+ GL+ Sbjct: 302 IPGLENAEFLKLGSIHRNLFINSPKRLNKDLSSKNDPWLFFAGQITGVEGYFESTCTGLM 361 >gi|282856244|ref|ZP_06265527.1| tRNA:M(5)U-54 methyltransferase [Pyramidobacter piscolens W5455] gi|282586003|gb|EFB91288.1| tRNA:M(5)U-54 methyltransferase [Pyramidobacter piscolens W5455] Length = 445 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 1/81 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE+ +R G Y++ P+ L L + + LFLAG Sbjct: 279 GFQTNLRWGEQQRVFRLIPGLERAEFVRMGVMHRNIYVDAPRCLDGCLRPRGMESLFLAG 338 Query: 368 QINGTTGYEEAAAQGLVAGIN 388 Q+ G GY E+ A G VA + Sbjct: 339 QMTGVEGYVESTAMGAVAALG 359 Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust. Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 13/84 (15%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGG----LG 54 V++ GGG AG EAA + G + H+T +G + C+ ++G Sbjct: 4 VVIAGGGLAGSEAAWQLVRRGIPVHMFEMRPVVSSPAHRTDKLGELVCSNSLGSDSGDSA 63 Query: 55 KGHLVREIDALDGLMGRVADAAGI 78 G L E+ ALD L+ + ADA + Sbjct: 64 AGLLKEELRALDSLIMKSADAHSV 87 >gi|282850775|ref|ZP_06260150.1| hypothetical protein HMPREF9209_1597 [Lactobacillus gasseri 224-1] gi|282558183|gb|EFB63770.1| hypothetical protein HMPREF9209_1597 [Lactobacillus gasseri 224-1] Length = 72 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 39/59 (66%) Query: 560 EKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTV 618 E + IP D DY+++P+L+ E ++K ++P ++ QA +I G+ PA L +L YI++ + Sbjct: 9 ESKKIPVDIDYNAIPSLATEARQKFEKIRPESIAQAERISGVNPADLAILTAYIQQGRI 67 >gi|15643497|ref|NP_228543.1| tRNA (uracil-5-)-methyltransferase Gid [Thermotoga maritima MSB8] gi|26006779|sp|Q9WZJ3|TRMFO_THEMA RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|4981259|gb|AAD35815.1|AE001744_5 glucose-inhibited division protein [Thermotoga maritima MSB8] Length = 435 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 33/84 (39%), Positives = 39/84 (46%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + +R IP L I+R G YIN PK L KK +F AG Sbjct: 277 GFQTRLKWSEQKRVLRKIPCLRNAEIVRYGVMHRNVYINSPKLLDIFFRLKKHPNIFFAG 336 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 QI G GY E+AA G+ N R Sbjct: 337 QITGVEGYMESAASGIYVAYNVHR 360 >gi|313678280|ref|YP_004056020.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Mycoplasma bovis PG45] gi|312950158|gb|ADR24753.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Mycoplasma bovis PG45] Length = 427 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 89/404 (22%), Positives = 154/404 (38%), Gaps = 77/404 (19%) Query: 10 VIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLG-------------KG 56 VIG G +G E K L K+ ++ N L KG Sbjct: 6 VIGAGISGSEVCYQLLKRNYLVELFEVKSIKKNAIQTNDLFANLAYSDSFHSNEITSAKG 65 Query: 57 HLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQEN 116 L +E+ LD + +VAD A + L V DR ++ + + S +N Sbjct: 66 VLKQEMRLLDSFIIKVADYASVATEPLLV-------------DRNKFQEYITNYLKSHKN 112 Query: 117 LDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIH--IGKLKIPAGRM 174 L +I+ E + D+S+ ++ TG + I KL + Sbjct: 113 LKIIEKEY-------------IEIDDSI----PTIIATGPLSSPALEKEIKKL------V 149 Query: 175 GDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT---- 230 G+S N F+ F + TI WD +K D++L + F+ Sbjct: 150 GESNFN-YFDQVQPIIFKS--------------TINWDYVQKSNNDDKLF-YCFLNKAEF 193 Query: 231 DKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSI--EDKIVRFGER 288 + + + I I + L ++ N S+I + I G + ++ D+++ + Sbjct: 194 EHLYSLIINAEIFISPLPNEIALVHNHGFSSIET--IAYKGKKELKNLLSTDELIESNDF 251 Query: 289 NGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINP 348 I L+ + N +++ T + Q++ I++IP L +I+R G + DYIN Sbjct: 252 YA-VISLKQDEYNENLLRIVNFQTNIKIPWQNEIIKSIPALRNSSILRYGVMHKNDYINS 310 Query: 349 KELFP-TLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSAR 391 + K +F GQ+ GT GY EA+A ++ IN R Sbjct: 311 ANVLDDNFSLKSKPNIFFVGQLTGTDGYLEASASAIICAINVDR 354 >gi|291286091|ref|YP_003502907.1| HI0933 family protein [Denitrovibrio acetiphilus DSM 12809] gi|290883251|gb|ADD66951.1| HI0933 family protein [Denitrovibrio acetiphilus DSM 12809] Length = 416 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 21/167 (12%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGG AG AA A + GAS L+ +GS+ I G G+ +L I Sbjct: 4 YDVIVIGGGPAGMMAAGTAGENGASVLLL----EKMGSLGRKLLISGSGRCNLTNTITVT 59 Query: 66 D------GLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELY----------RLAMQR 109 G GR A F + RG T +++ L++ Sbjct: 60 KDFVEHFGKKGRFLYPALNGFSTTDTISFFNGRGLVTTVEKDFKIFPESETAAEVLSVLT 119 Query: 110 EILSQENLDVIQGE-VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTG 155 + + +D+ QG + +T NII+S+ + N +I C ++++TTG Sbjct: 120 RYMKENRVDIRQGVIIKNIHTADNIITSVELAGNEVITCKSLIITTG 166 >gi|148269340|ref|YP_001243800.1| tRNA (uracil-5-)-methyltransferase Gid [Thermotoga petrophila RKU-1] gi|281411963|ref|YP_003346042.1| gid protein [Thermotoga naphthophila RKU-10] gi|205830346|sp|A5IJ51|TRMFO_THEP1 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|147734884|gb|ABQ46224.1| gid protein [Thermotoga petrophila RKU-1] gi|281373066|gb|ADA66628.1| gid protein [Thermotoga naphthophila RKU-10] Length = 435 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 33/84 (39%), Positives = 39/84 (46%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + +R IP L I+R G YIN PK L KK +F AG Sbjct: 277 GFQTRLKWNEQKRVLRKIPCLRNAEIVRYGVMHRNVYINSPKLLDIFFRLKKQPNIFFAG 336 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 QI G GY E+AA G+ N R Sbjct: 337 QITGVEGYMESAASGIYVAYNVYR 360 >gi|23013337|ref|ZP_00053245.1| COG1206: NAD(FAD)-utilizing enzyme possibly involved in translation [Magnetospirillum magnetotacticum MS-1] gi|46202424|ref|ZP_00208511.1| COG1206: NAD(FAD)-utilizing enzyme possibly involved in translation [Magnetospirillum magnetotacticum MS-1] Length = 130 Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 1/86 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE R G ++N P+ L +L K L LAG Sbjct: 34 GFQTKLRHGEQSRIFRAIPGLENAEFARLGGLHRNTFVNGPRVLDRSLRLKAQPRLRLAG 93 Query: 368 QINGTTGYEEAAAQGLVAGINSARKS 393 QI G GY E++A GL+AG+ +A ++ Sbjct: 94 QITGCEGYVESSAIGLLAGLFAAAEA 119 >gi|301166609|emb|CBW26185.1| protein Gid homolog [Bacteriovorax marinus SJ] Length = 455 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 1/85 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFP-TLETKKISGLFLAG 367 G T L + Q + R IPG E+ + I G ++N K+L L +KK + AG Sbjct: 293 GFQTRLTYKEQVRVFRKIPGFEEASFIHLGSVHRNSFLNSKKLLNFDLSSKKYETIHFAG 352 Query: 368 QINGTTGYEEAAAQGLVAGINSARK 392 QI G GY E+A+ GL A RK Sbjct: 353 QITGVEGYTESASMGLYAAWQVLRK 377 Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust. Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 25/131 (19%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALITHKT---------STIGSMSCNPAIGGL----G 54 V+VIG G AGC+AA A G L+ KT T + C ++ + G Sbjct: 8 VLVIGAGLAGCDAAMFLASRGVKVVLVECKTLFLNPAQKMKTYAELVCTNSLKSMSPDTG 67 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L E++A MG + G+++ V PA G +RE + A+ + + Sbjct: 68 HGLLKYEMNA----MGSYILSKGMEYAV------PA--GDALAVNREEFSAAITKGLHEH 115 Query: 115 ENLDVIQGEVA 125 EN+++ E A Sbjct: 116 ENIEIFAEEAA 126 >gi|315498265|ref|YP_004087069.1| gid protein [Asticcacaulis excentricus CB 48] gi|315416277|gb|ADU12918.1| gid protein [Asticcacaulis excentricus CB 48] Length = 470 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 44/144 (30%), Positives = 66/144 (45%), Gaps = 15/144 (10%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISG---LF 364 G T L Q + R IPGL+ R G +I +PK L L K++ G L Sbjct: 292 GFQTKLKHGAQAEVFRMIPGLQNAQFARLGGLHRNTFIQSPKVLGADLRLKRLIGERSLR 351 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQI G GY E+AA GL+AG+ +A ++ K + + +G +I +T + Sbjct: 352 FAGQITGVEGYVESAAMGLLAGLFAAAEA-KGKTLPPPPPTTALGALIGHITGGHL---- 406 Query: 425 RMFTSRAEYRISLRPDNADNRLTP 448 A+ + S +P N + L P Sbjct: 407 ------ADEKASFQPMNINYGLLP 424 >gi|307317060|ref|ZP_07596501.1| gid protein [Sinorhizobium meliloti AK83] gi|306897148|gb|EFN27893.1| gid protein [Sinorhizobium meliloti AK83] Length = 472 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 38/114 (33%), Positives = 54/114 (47%), Gaps = 2/114 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGL+ R G YIN P L +L K GL AG Sbjct: 294 GFQTKLKYGAQGEVFRMIPGLQNAEFARLGGLHRNTYINSPTLLDHSLTLKSRPGLRFAG 353 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 QI G GY E+A+ GL+AG +A + + T ++ G ++D +T ++ Sbjct: 354 QITGCEGYVESASIGLLAGRFAAAERKGASPVLPPVTTAF-GALLDHITGGHIV 406 >gi|86749845|ref|YP_486341.1| tRNA (uracil-5-)-methyltransferase Gid [Rhodopseudomonas palustris HaA2] gi|123292561|sp|Q2IWI0|TRMFO_RHOP2 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|86572873|gb|ABD07430.1| gid protein [Rhodopseudomonas palustris HaA2] Length = 482 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 33/83 (39%), Positives = 42/83 (50%), Gaps = 1/83 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + RTIPGLE R G ++N PK L L + L AG Sbjct: 300 GFQTKLNYAAQQRVFRTIPGLENAEFARLGGLHRNTFLNSPKLLDAGLRLRAAPRLRFAG 359 Query: 368 QINGTTGYEEAAAQGLVAGINSA 390 Q+ G GY E+A GLVAG+++A Sbjct: 360 QMTGCEGYVESAGIGLVAGLSAA 382 >gi|332186143|ref|ZP_08387889.1| tRNA:m(5)U-54 methyltransferase [Sphingomonas sp. S17] gi|332013958|gb|EGI56017.1| tRNA:m(5)U-54 methyltransferase [Sphingomonas sp. S17] Length = 464 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 42/119 (35%), Positives = 55/119 (46%), Gaps = 4/119 (3%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF-PTLETKKISGLFLAG 367 G T L Q + RTIPGLEK R G +I EL TL K L AG Sbjct: 282 GFQTKLKYAEQIRIFRTIPGLEKAEFARLGGLHRNTFIRSPELLDATLRLKSRPNLRFAG 341 Query: 368 QINGTTGYEEAAAQGLVAG-INSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 QI G GY E+AA GL+AG +A + K I ++ +G ++ +T E Y+ Sbjct: 342 QITGCEGYIESAAIGLLAGRFAAAELTGK--TIAPPPVETALGALLGHITGLAEAETYQ 398 >gi|317131317|ref|YP_004090631.1| gid protein [Ethanoligenens harbinense YUAN-3] gi|315469296|gb|ADU25900.1| gid protein [Ethanoligenens harbinense YUAN-3] Length = 440 Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 32/89 (35%), Positives = 43/89 (48%), Gaps = 1/89 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTL-ETKKISGLFLAG 367 G T L Q + IPGLE+ +R G ++N L K +F AG Sbjct: 284 GFQTHLRFPEQKRVFSMIPGLERAEFVRYGVMHRNTFLNAPGLLDRFYRLKSDPRVFFAG 343 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKL 396 Q+ G GY E+AA GL AG+N AR++ L Sbjct: 344 QMTGVEGYLESAASGLDAGLNCARQTMGL 372 >gi|256026612|ref|ZP_05440446.1| tRNA (uracil-5-)-methyltransferase Gid [Fusobacterium sp. D11] Length = 448 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 40/112 (35%), Positives = 52/112 (46%), Gaps = 4/112 (3%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF-PTLETKKISGLFLAG 367 G T L Q + IPGLE IR G +IN +L TL K ++ AG Sbjct: 293 GFQTNLKFGEQKRVFSMIPGLENAEFIRYGVMHRNTFINSTKLLDKTLRLKNRDNIYFAG 352 Query: 368 QINGTTGYEEAAAQGLVAGINSA-RKSNKLDCICFSRTDSYIGVMIDDLTSK 418 QI G GY A A G+ A IN A R NK + I S IG +++ +T + Sbjct: 353 QITGGEGYVTAIATGMYAAINVANRLENKKEFIL--EDISEIGAIVNYITEE 402 >gi|213423029|ref|ZP_03356047.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 35 Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 22/34 (64%), Positives = 25/34 (73%) Query: 67 GLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADR 100 GLM + D AGIQF++LN KGPAVR R QADR Sbjct: 1 GLMAKAIDQAGIQFKILNASKGPAVRATRAQADR 34 >gi|148255759|ref|YP_001240344.1| tRNA (uracil-5-)-methyltransferase Gid [Bradyrhizobium sp. BTAi1] gi|205830326|sp|A5EJU4|TRMFO_BRASB RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|146407932|gb|ABQ36438.1| hypothetical protein BBta_4399 [Bradyrhizobium sp. BTAi1] Length = 465 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 33/86 (38%), Positives = 44/86 (51%), Gaps = 1/86 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q Q RTIPGLE R G ++N PK L L + L AG Sbjct: 283 GFQTKLKYGPQQQIFRTIPGLENAEFARLGGLHRNTFLNSPKLLDAQLRLRAQPRLRFAG 342 Query: 368 QINGTTGYEEAAAQGLVAGINSARKS 393 Q+ G GY E+A+ GL+AG+ +A ++ Sbjct: 343 QMTGCEGYVESASIGLIAGLYAAAEA 368 >gi|289764613|ref|ZP_06523991.1| tRNA (uracil-5-)-methyltransferase Gid [Fusobacterium sp. D11] gi|289716168|gb|EFD80180.1| tRNA (uracil-5-)-methyltransferase Gid [Fusobacterium sp. D11] Length = 434 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 40/112 (35%), Positives = 52/112 (46%), Gaps = 4/112 (3%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF-PTLETKKISGLFLAG 367 G T L Q + IPGLE IR G +IN +L TL K ++ AG Sbjct: 279 GFQTNLKFGEQKRVFSMIPGLENAEFIRYGVMHRNTFINSTKLLDKTLRLKNRDNIYFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSA-RKSNKLDCICFSRTDSYIGVMIDDLTSK 418 QI G GY A A G+ A IN A R NK + I S IG +++ +T + Sbjct: 339 QITGGEGYVTAIATGMYAAINVANRLENKKEFIL--EDISEIGAIVNYITEE 388 >gi|197123193|ref|YP_002135144.1| tRNA (uracil-5-)-methyltransferase Gid [Anaeromyxobacter sp. K] gi|226707902|sp|B4UII2|TRMFO_ANASK RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|196173042|gb|ACG74015.1| gid protein [Anaeromyxobacter sp. K] Length = 453 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 39/122 (31%), Positives = 57/122 (46%), Gaps = 4/122 (3%) Query: 266 DIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRT 325 ++ ++GP +ED R G R + L E ++ G T L Q + R Sbjct: 240 EVLAHGPLKPVGLEDP--RTGRRPHAVVQLRREDVDGTAWNLVGFQTRLTWPEQRRIFRA 297 Query: 326 -IPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGL 383 +PGL +R G +++ P+ L P L + LFLAGQI G GY E+AA GL Sbjct: 298 FLPGLANAEFVRLGQIHRNTFVDAPRVLAPDLSVRAAPHLFLAGQITGVEGYVESAACGL 357 Query: 384 VA 385 +A Sbjct: 358 LA 359 >gi|85716179|ref|ZP_01047154.1| glucose-inhibited division protein A [Nitrobacter sp. Nb-311A] gi|85697012|gb|EAQ34895.1| glucose-inhibited division protein A [Nitrobacter sp. Nb-311A] Length = 477 Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 33/83 (39%), Positives = 42/83 (50%), Gaps = 1/83 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + RTIPGLE R G ++N PK L L + L AG Sbjct: 295 GFQTKLKHSAQTRIFRTIPGLENAEFARLGGLHRNTFLNSPKLLDNRLRLRAEPRLRFAG 354 Query: 368 QINGTTGYEEAAAQGLVAGINSA 390 Q+ G GY E+AA GL+AG+ +A Sbjct: 355 QMTGCEGYVESAAIGLIAGLYAA 377 >gi|328949745|ref|YP_004367080.1| glucose-inhibited division protein A [Marinithermus hydrothermalis DSM 14884] gi|328450069|gb|AEB10970.1| glucose-inhibited division protein A [Marinithermus hydrothermalis DSM 14884] Length = 227 Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 44/186 (23%), Positives = 74/186 (39%), Gaps = 32/186 (17%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+++G G +G EAA A+ GA L+T T+ + P G +G L+ EI Sbjct: 3 YDVLIVGAGFSGAEAAYALARRGARVGLMTQSLDTV-YLPFTPVPGPAPEGTLLAEI--- 58 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 AGI A EL+R A + + ++ NL + Q Sbjct: 59 --------WEAGI-------------------APWELHRKA-KYALEAERNLHLFQSSAT 90 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + VL G+FL +++G + AGR+ ++ L+ Sbjct: 91 RLLVEAGRVVGVATWEGPRRLAEKTVLAVGSFLDPKLYVGMVVEAAGRLAEAAYPDLYED 150 Query: 186 FMKFDF 191 ++ F Sbjct: 151 LVRHGF 156 >gi|319408368|emb|CBI82021.1| gid-family protein [Bartonella schoenbuchensis R1] Length = 466 Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 52/109 (47%), Gaps = 2/109 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + RTIPGLEK R G Y+N P L +L K+ L AG Sbjct: 291 GFQTKLKYGEQIRIFRTIPGLEKAEFARLGGLHRNTYLNSPIILDKSLRLKQKPQLRFAG 350 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 QI G GY E++A GL+AG + + N C + G +++ +T Sbjct: 351 QITGCEGYVESSAIGLLAGRFAVAEYNH-TCPSLPPKTTAFGALLNHIT 398 >gi|146340957|ref|YP_001206005.1| tRNA (uracil-5-)-methyltransferase Gid [Bradyrhizobium sp. ORS278] gi|205830327|sp|A4YV54|TRMFO_BRASO RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|146193763|emb|CAL77780.1| conserved hypothetical protein; putative glucose-inhibited division protein (gid) [Bradyrhizobium sp. ORS278] Length = 465 Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 33/86 (38%), Positives = 44/86 (51%), Gaps = 1/86 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q Q RTIPGLE R G ++N PK L L + L AG Sbjct: 283 GFQTKLKYGPQQQIFRTIPGLENAEFARLGGLHRNTFLNSPKLLDQQLRLRAQPRLRFAG 342 Query: 368 QINGTTGYEEAAAQGLVAGINSARKS 393 Q+ G GY E+A+ GL+AG+ +A ++ Sbjct: 343 QMTGCEGYVESASIGLIAGLYAAAEA 368 >gi|158424513|ref|YP_001525805.1| tRNA (uracil-5-)-methyltransferase Gid [Azorhizobium caulinodans ORS 571] gi|205830307|sp|A8ID68|TRMFO_AZOC5 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|158331402|dbj|BAF88887.1| gid protein [Azorhizobium caulinodans ORS 571] Length = 471 Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 34/79 (43%), Positives = 40/79 (50%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q + RTIPGLE R G Y+N P+ L TL K L AG Sbjct: 293 GFQTKMRHGEQVRVFRTIPGLENAEFARLGGLHRNTYLNSPRLLDGTLRLKAAPRLRFAG 352 Query: 368 QINGTTGYEEAAAQGLVAG 386 QI G GY E+AA GL+AG Sbjct: 353 QITGCEGYVESAAVGLMAG 371 >gi|85374098|ref|YP_458160.1| tRNA (uracil-5-)-methyltransferase Gid [Erythrobacter litoralis HTCC2594] gi|122544460|sp|Q2NAC8|TRMFO_ERYLH RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|84787181|gb|ABC63363.1| putative glucose-inhibited division protein (gid) [Erythrobacter litoralis HTCC2594] Length = 455 Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 2/118 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + RTIPGLE R G ++N P L L K + AG Sbjct: 295 GFQTKLKYGAQVELFRTIPGLENAEFARLGGLHRNTFLNSPMVLDRQLRLKGAEHIRFAG 354 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 Q+ G GY E+AA GL+AG+ +A++ RT + +G ++ +T E Y+ Sbjct: 355 QVTGCEGYVESAAVGLMAGMMTAKELAGDVWQGPPRTTA-LGALLSHITGDAEAETYQ 411 Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust. Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 27/135 (20%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALI----------THKTSTIGSMSCNPAIGGLG 54 S+DV +IGGG AG EAA A+ G L H+T + + C+ + Sbjct: 2 SHDVHIIGGGLAGSEAAWQLARRGVKVRLSEMRGSGEMTHAHQTDGLAELVCSNSFRSDD 61 Query: 55 K-----GHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQR 109 G L E+ ALD L+ R + A + PA G DR+++ +Q+ Sbjct: 62 DTKNAVGLLHYEMRALDSLVMRAGEVAQV----------PA--GSAMAVDRDVFSAEVQK 109 Query: 110 EILSQENLDVIQGEV 124 + + N++V++ V Sbjct: 110 TLEAHPNIEVVRERV 124 >gi|220917982|ref|YP_002493286.1| gid protein [Anaeromyxobacter dehalogenans 2CP-1] gi|254789163|sp|B8JES4|TRMFO_ANAD2 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|219955836|gb|ACL66220.1| gid protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 453 Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 39/122 (31%), Positives = 57/122 (46%), Gaps = 4/122 (3%) Query: 266 DIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRT 325 ++ ++GP +ED R G R + L E ++ G T L Q + R Sbjct: 240 EVLAHGPLKPVGLEDP--RTGRRPHAVVQLRREDVDGTAWNLVGFQTRLTWPEQRRIFRA 297 Query: 326 -IPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGL 383 +PGL +R G +++ P+ L P L + LFLAGQI G GY E+AA GL Sbjct: 298 FLPGLANAEFVRLGQIHRNTFVDAPRVLAPDLSVRAAPHLFLAGQITGVEGYVESAACGL 357 Query: 384 VA 385 +A Sbjct: 358 MA 359 >gi|262197812|ref|YP_003269021.1| methylenetetrahydrofolate--tRNA-(uracil-5-)-meth yltransferase(FADH(2)-oxidizing) [Haliangium ochraceum DSM 14365] gi|262081159|gb|ACY17128.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)-meth yltransferase(FADH(2)-oxidizing) [Haliangium ochraceum DSM 14365] Length = 487 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 102/425 (24%), Positives = 162/425 (38%), Gaps = 55/425 (12%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAI----GGL 53 DV VIGGG AGCEAA A+ G +L+ H+T + + C+ ++ Sbjct: 13 DVTVIGGGLAGCEAAWQLAERGFFVSLVEMKPHLMSPAHQTPLLCELVCSNSLRSNEPST 72 Query: 54 GKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELY-RLAMQREI- 111 G G L RE+ L G + A + RV G A+ R R + RLA+ I Sbjct: 73 GPGLLKRELR----LAGSMVLACADEHRV---PAGSALAVERFGFGRAVTTRLALHPRIR 125 Query: 112 LSQENLDVIQ--------GEVAGFNTEKNIISSIVMQDN-------SMIRCSTVVLTTGT 156 L + LD + G + G + I S+ D + I + + + Sbjct: 126 LERRALDALPEGPTILATGPLTGGKLAETI-RSLTGGDRLYFYDAIAPIVSAESISPEHS 184 Query: 157 FLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEK 216 F K+ AG GD +++ +S + TG A +G I + Sbjct: 185 FRASRWDKHGPKLTAGAPGDR-ADAKDDSVQSSEDGASGCSTGAEAGAEGDYINCPLDRE 243 Query: 217 QFADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYS--GDIKSYGPRY 274 Q+ +F+ + + R++ + + E R + + S ++ +GP Sbjct: 244 QYE-------AFVREVLAARKV----SPRSFEEPRYFEGCLPIEVLASRGPEVLRHGPMR 292 Query: 275 CPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNI 334 + D R G + L PE G T L Q + R IPGL + Sbjct: 293 PVGLTDP--RTGRWPYAVVQLRPENRYLSAYNLVGFQTRLAYPEQQRIFRMIPGLGEAEF 350 Query: 335 IRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKS 393 +R G YI+ P +L P LE + + +AG + G GY E+ A GL+A A + Sbjct: 351 LRFGSIHRNTYIDAPTQLGPELELRARPDVRVAGLLTGVEGYIESCAMGLLAAWFMAARL 410 Query: 394 NKLDC 398 C Sbjct: 411 RGQAC 415 >gi|254563205|ref|YP_003070300.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gid [Methylobacterium extorquens DM4] gi|254270483|emb|CAX26486.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gid [Methylobacterium extorquens DM4] Length = 490 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 40/116 (34%), Positives = 53/116 (45%), Gaps = 2/116 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + RTIPGLE R G Y++ P+ L TL K L AG Sbjct: 305 GFQTKLRHAEQVRVFRTIPGLENAEFARLGGLHRNTYLDSPRLLDATLRLKARPQLRFAG 364 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 QI G GY E+AA GL+AG + ++ T + +G +I +T V P Sbjct: 365 QITGCEGYVESAAVGLMAGRYALAEAEGQTLAPLPPTTA-LGALIGHITGGHVEAP 419 Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust. Identities = 38/137 (27%), Positives = 58/137 (42%), Gaps = 26/137 (18%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAI-----GGL 53 + ++GGG AG EAA A+ G L H T + + C+ + G Sbjct: 21 IHIVGGGLAGSEAAWQVAQGGRRVVLHEMRPVRATDAHHTDGLAELVCSNSFRSDDANGN 80 Query: 54 GKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILS 113 G L +E+ +LD L+ R ADA V G A+ DRE + A+ + Sbjct: 81 AVGLLHQEMRSLDSLIMRTADAH-------QVPAGGAL-----AVDREGFSRAVTAALED 128 Query: 114 QENLDVIQGEVAGFNTE 130 N+ +++ EVAG E Sbjct: 129 HPNITIVREEVAGLPPE 145 >gi|210633133|ref|ZP_03297700.1| hypothetical protein COLSTE_01613 [Collinsella stercoris DSM 13279] gi|210159287|gb|EEA90258.1| hypothetical protein COLSTE_01613 [Collinsella stercoris DSM 13279] Length = 444 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 40/131 (30%), Positives = 55/131 (41%), Gaps = 8/131 (6%) Query: 259 HSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEI 318 H AI G +K G + D R G+R + L E G T L Sbjct: 238 HDAIRFGAMKPVG------LIDP--RTGKRPWAAVQLRAENAECTAYNLVGFQTNLTFSE 289 Query: 319 QHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEA 378 Q + R IPGLE+ R G +++ + + + LAGQI GT GY EA Sbjct: 290 QKRVFRMIPGLERAEFFRYGVMHRNTFVDAPRVLDKTFAVPGTRIRLAGQITGTEGYTEA 349 Query: 379 AAQGLVAGINS 389 A GL+A +N+ Sbjct: 350 IASGLLAALNT 360 >gi|154248234|ref|YP_001419192.1| gid protein [Xanthobacter autotrophicus Py2] gi|205830348|sp|A7INE1|TRMFO_XANP2 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|154162319|gb|ABS69535.1| gid protein [Xanthobacter autotrophicus Py2] Length = 471 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 35/79 (44%), Positives = 40/79 (50%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + RTIPGLE R G Y+N P+ L TL K L AG Sbjct: 292 GFQTKLRHGEQARVFRTIPGLENAEFARLGGLHRNTYLNSPRLLDGTLRLKADPRLRFAG 351 Query: 368 QINGTTGYEEAAAQGLVAG 386 QI G GY E+AA GL+AG Sbjct: 352 QITGCEGYVESAAVGLMAG 370 >gi|332976747|gb|EGK13578.1| tRNA:M(5)U-54 methyltransferase [Desmospora sp. 8437] Length = 241 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + +R IPGLE+ I+R G +IN P+ L PT + ++ LF AG Sbjct: 174 GFQTHLKWGEQKRILRMIPGLEQAEIVRYGVMHRNTFINSPRALLPTYQFRERKDLFFAG 233 Query: 368 QINGTTGY 375 Q+ G GY Sbjct: 234 QMTGVEGY 241 >gi|15606096|ref|NP_213473.1| tRNA (uracil-5-)-methyltransferase Gid [Aquifex aeolicus VF5] gi|26006757|sp|O66913|TRMFO_AQUAE RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|2983279|gb|AAC06872.1| glucose inhibited division protein A [Aquifex aeolicus VF5] Length = 445 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 3/117 (2%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINP-KELFPTLETKKISGLFLAG 367 G T L + Q + R IP L +R G +I K L L KK +F AG Sbjct: 279 GFQTKLTYKEQKRVFRLIPCLRNAVFVRLGSMHRNTFIQSNKVLTHYLNLKKKENIFFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK-GVLEP 423 QI G GY ++A G++AGIN+ R + + + T++ +G +++ + +K G L+P Sbjct: 339 QITGVEGYVASSATGILAGINAGRLARGEKPLK-APTETMLGALVNYIVTKEGELQP 394 Score = 43.9 bits (102), Expect = 0.087, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 59/130 (45%), Gaps = 25/130 (19%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGL----G 54 VIVIGGG AG EAA A G L HKT + + C+ +GGL G Sbjct: 5 VIVIGGGLAGSEAAWRLANEGHRVILYEMRPKKMTPAHKTGNLAELVCSNTLGGLELTTG 64 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L E+ L L V +AA +V V G A+ DR+++ + +I S Sbjct: 65 AGLLKAEMQKLGSL---VIEAA----KVARVPAGGAL-----GVDRKIFSEYITEKIESH 112 Query: 115 ENLDVIQGEV 124 N+ +I+ EV Sbjct: 113 PNITLIREEV 122 >gi|298530283|ref|ZP_07017685.1| gid protein [Desulfonatronospira thiodismutans ASO3-1] gi|298509657|gb|EFI33561.1| gid protein [Desulfonatronospira thiodismutans ASO3-1] Length = 442 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 45/135 (33%), Positives = 63/135 (46%), Gaps = 6/135 (4%) Query: 288 RNGHQIF----LEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEY 343 R G Q F L E L G T L Q + IPGLE +R G Sbjct: 259 RTGEQPFAVVQLRAENLEKTAFNLVGFQTRLKLGEQKRVFSMIPGLENAEFLRLGSMHRN 318 Query: 344 DYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFS 402 ++N P+ L LE K G++LAGQI+G GY E+AA GL G+ ++ +D Sbjct: 319 TFVNAPQVLTRNLELKARPGVYLAGQISGVEGYLESAACGLWLGLRLGLEARGIDPPAPP 378 Query: 403 RTDSYIGVMIDDLTS 417 R D+ +G +++ L S Sbjct: 379 R-DTALGALMNHLQS 392 >gi|110679839|ref|YP_682846.1| tRNA (uracil-5-)-methyltransferase Gid [Roseobacter denitrificans OCh 114] gi|122972724|sp|Q166D3|TRMFO_ROSDO RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|109455955|gb|ABG32160.1| glucose-inhibited division protein, putative [Roseobacter denitrificans OCh 114] Length = 450 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 88/399 (22%), Positives = 146/399 (36%), Gaps = 63/399 (15%) Query: 10 VIGGGHAGCEAAAVAAKLGASTAL---------ITHKTSTIGSMSCNPAIGGLGKGHLVR 60 ++GGG AG EAA AA++G L H+T +G M C+ + Sbjct: 7 IVGGGMAGSEAAWQAAEMGVDVVLHEMRPKVGTFAHQTGLLGEMVCSNSFRSDDD----- 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E +A+ L + A G+ R+ + + PA G DR+L+ ++ + + + + Sbjct: 62 EQNAVGLLHWEMRAAGGLIMRMADKHRLPA--GGALAVDRDLFAQSVTDTLTAHPRITIE 119 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 GE++ I + +S + + T G L I + S Sbjct: 120 YGEISELPASGQWIFATGPLTSSKLSDAIAAQTGGAALAFFDAIAPIVY-------FDSI 172 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 + ++M+ +D G + A L+ DK + E I DK ++ E Sbjct: 173 DMSRAWMQSRYDKGETEEERTAYLNCPM---DKDQY----EAFIDALLAADKTEFKEGET 225 Query: 241 G-----------ITRTNLETHRI-IMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGER 288 + ET R M+ + + + D+K Y +V+ Sbjct: 226 ADYFDGCLPIEVMAERGRETLRFGPMKPVGLTNPHQPDVKPYA----------VVQLRRD 275 Query: 289 NGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN- 347 N G T + Y Q +TIPGLE + R G ++N Sbjct: 276 NKLGTLYNIVGFQTKMKY----------GAQAAVFKTIPGLENASFARLGGIHRNTFLNA 325 Query: 348 PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAG 386 P L + + + AGQI G GY E+AA GL+AG Sbjct: 326 PTLLDEQMRLRSRPNIRFAGQITGVEGYVESAAMGLLAG 364 >gi|87199932|ref|YP_497189.1| tRNA (uracil-5-)-methyltransferase Gid [Novosphingobium aromaticivorans DSM 12444] gi|123489351|sp|Q2G718|TRMFO_NOVAD RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|87135613|gb|ABD26355.1| gid protein [Novosphingobium aromaticivorans DSM 12444] Length = 456 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 2/118 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + RTIPGLE R G ++N P L L K + AG Sbjct: 299 GFQTKLKHAEQVRVFRTIPGLENAEFARLGGLHRNTFLNSPTLLDRQLRLKSAPNVRFAG 358 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 QI G GY E+ + G++AG+ A + LD RT + +G ++ +T E ++ Sbjct: 359 QITGCEGYVESGSVGMLAGLMVAAQIAGLDWSPPPRT-TALGALLAHITGDAEAESFQ 415 >gi|92117349|ref|YP_577078.1| tRNA (uracil-5-)-methyltransferase Gid [Nitrobacter hamburgensis X14] gi|122417936|sp|Q1QMC9|TRMFO_NITHX RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|91800243|gb|ABE62618.1| gid protein [Nitrobacter hamburgensis X14] Length = 477 Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 33/83 (39%), Positives = 42/83 (50%), Gaps = 1/83 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + RTIPGLE R G ++N PK L L + L AG Sbjct: 295 GFQTKLKHGAQTRVFRTIPGLETAEFARLGGLHRNTFLNSPKLLDTQLRLRAEPRLRFAG 354 Query: 368 QINGTTGYEEAAAQGLVAGINSA 390 Q+ G GY E+AA GL+AG+ +A Sbjct: 355 QMTGCEGYVESAAIGLIAGLYAA 377 >gi|240140694|ref|YP_002965174.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gid [Methylobacterium extorquens AM1] gi|240010671|gb|ACS41897.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gid [Methylobacterium extorquens AM1] Length = 490 Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 40/116 (34%), Positives = 53/116 (45%), Gaps = 2/116 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + RTIPGLE R G Y++ P+ L TL K L AG Sbjct: 305 GFQTKLRHAEQVRVFRTIPGLENAEFARLGGLHRNTYLDSPRLLDATLRLKARPQLRFAG 364 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 QI G GY E+AA GL+AG + ++ T + +G +I +T V P Sbjct: 365 QITGCEGYVESAAVGLMAGRYALAEAEGQTLAPLPPTTA-LGALIGHITGGHVEAP 419 Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust. Identities = 38/137 (27%), Positives = 59/137 (43%), Gaps = 26/137 (18%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAI-----GGL 53 + ++GGG AG EAA A+ G + L H T + + C+ + G Sbjct: 21 IHIVGGGLAGSEAAWQVAQGGRTVVLHEMRPVRATDAHHTDGLAELVCSNSFRSDDANGN 80 Query: 54 GKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILS 113 G L +E+ +LD L+ R ADA V G A+ DRE + A+ + Sbjct: 81 AVGLLHQEMRSLDSLIMRTADAH-------QVPAGGAL-----AVDREGFSRAVTAALEE 128 Query: 114 QENLDVIQGEVAGFNTE 130 N+ +++ EVAG E Sbjct: 129 HPNITIVREEVAGLPPE 145 >gi|67925116|ref|ZP_00518491.1| Gid protein [Crocosphaera watsonii WH 8501] gi|67853035|gb|EAM48419.1| Gid protein [Crocosphaera watsonii WH 8501] Length = 456 Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 42/110 (38%), Positives = 57/110 (51%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE +R G +IN P+ L PTL+ K + AG Sbjct: 293 GFQTNLKWGEQKRVFRLIPGLENAEFVRMGVMHRNTFINSPQLLNPTLQFKSRPNVLAAG 352 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ GT GY AAA G +AG N+AR + LD I T +G + + ++S Sbjct: 353 QLIGTEGYTAAAAGGWLAGTNAARIALGLDPISLPST-MMMGALFEFISS 401 >gi|323140525|ref|ZP_08075452.1| tRNA:m(5)U-54 methyltransferase [Phascolarctobacterium sp. YIT 12067] gi|322414977|gb|EFY05769.1| tRNA:m(5)U-54 methyltransferase [Phascolarctobacterium sp. YIT 12067] Length = 442 Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE +R G + Y+N P+ L + + AG Sbjct: 281 GFQTHLKWPEQRRVFGMIPGLENAEFVRFGVMHKNTYLNSPQLLDKHFNLRNNKRFYFAG 340 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA GL+AG+ +AR Sbjct: 341 QMTGVEGYVESAASGLMAGLAAAR 364 >gi|218532141|ref|YP_002422957.1| tRNA (uracil-5-)-methyltransferase Gid [Methylobacterium chloromethanicum CM4] gi|218524444|gb|ACK85029.1| gid protein [Methylobacterium chloromethanicum CM4] Length = 474 Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 40/116 (34%), Positives = 53/116 (45%), Gaps = 2/116 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + RTIPGLE R G Y++ P+ L TL K L AG Sbjct: 289 GFQTKLRHAEQVRVFRTIPGLENAEFARLGGLHRNTYLDSPRLLDATLRLKARPQLRFAG 348 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 QI G GY E+AA GL+AG + ++ T + +G +I +T V P Sbjct: 349 QITGCEGYVESAAVGLMAGRYALAEAEGQTLAPLPPT-TALGALIGHITGGHVEAP 403 Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust. Identities = 38/137 (27%), Positives = 59/137 (43%), Gaps = 26/137 (18%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAI-----GGL 53 + ++GGG AG EAA A+ G + L H T + + C+ + G Sbjct: 5 IHIVGGGLAGSEAAWQVAQGGRTVVLHEMRPVRATDAHHTDGLAELVCSNSFRSDDANGN 64 Query: 54 GKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILS 113 G L +E+ +LD L+ R ADA V G A+ DRE + A+ + Sbjct: 65 AVGLLHQEMRSLDSLIMRTADAH-------QVPAGGAL-----AVDREGFSRAVTAALED 112 Query: 114 QENLDVIQGEVAGFNTE 130 N+ +++ EVAG E Sbjct: 113 HPNITIVREEVAGLPPE 129 >gi|218888228|ref|YP_002437549.1| tRNA (uracil-5-)-methyltransferase Gid [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218759182|gb|ACL10081.1| gid protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 445 Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust. Identities = 42/135 (31%), Positives = 59/135 (43%), Gaps = 2/135 (1%) Query: 284 RFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEY 343 R G+R + L E LN G T L Q + R IPGL +R G Sbjct: 261 RTGQRPYAIVQLRAENLNRTAYNLVGCQTKLKYGEQERVFRMIPGLANAEFVRHGSMHRN 320 Query: 344 DYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFS 402 Y+N P L L + + LAGQI G GY E+AA GL G+ A ++ D + Sbjct: 321 TYVNAPLVLADDLALRPHRHVHLAGQITGVEGYVESAACGLWLGMLLAARALGRD-LPAP 379 Query: 403 RTDSYIGVMIDDLTS 417 D+ +G ++ L + Sbjct: 380 PVDTALGALLHHLRT 394 >gi|302335677|ref|YP_003800884.1| gid protein [Olsenella uli DSM 7084] gi|301319517|gb|ADK68004.1| gid protein [Olsenella uli DSM 7084] Length = 441 Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 49/107 (45%), Gaps = 2/107 (1%) Query: 284 RFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEY 343 R G R + L E + G T L Q + R IPGLE+ + R G Sbjct: 253 RTGRRPWAAVQLRAENVGRTAYNLVGFQTNLSWGEQKRVFRMIPGLEEADFFRYGVMHRN 312 Query: 344 DYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINS 389 +++ P+ L T + LAGQI GT GY EA A GL+A +N+ Sbjct: 313 SFVDAPRVLTDTFAIPHTQ-VRLAGQITGTEGYVEAIASGLLAALNT 358 >gi|304321786|ref|YP_003855429.1| glucose-inhibited division protein A [Parvularcula bermudensis HTCC2503] gi|303300688|gb|ADM10287.1| glucose-inhibited division protein A [Parvularcula bermudensis HTCC2503] Length = 461 Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust. Identities = 34/79 (43%), Positives = 38/79 (48%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q R IPGLE R G +IN PK L L K GL AG Sbjct: 286 GFQTKLKYGAQGDVFRLIPGLENARFARLGGIHRNTFINSPKVLTDDLSAKAQPGLRFAG 345 Query: 368 QINGTTGYEEAAAQGLVAG 386 Q+ G GY E+AA GL+AG Sbjct: 346 QMTGVEGYLESAAIGLLAG 364 >gi|328543826|ref|YP_004303935.1| methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO [polymorphum gilvum SL003B-26A1] gi|326413570|gb|ADZ70633.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO [Polymorphum gilvum SL003B-26A1] Length = 466 Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust. Identities = 34/80 (42%), Positives = 40/80 (50%), Gaps = 1/80 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE R G ++N PK L TL K S L AG Sbjct: 283 GFQTKLRYGAQAEIFRMIPGLEHAEFARLGGLHRNTFLNSPKLLDATLRLKAESRLRFAG 342 Query: 368 QINGTTGYEEAAAQGLVAGI 387 QI G GY E+AA G +AG+ Sbjct: 343 QITGCEGYVESAAIGCLAGL 362 >gi|86138400|ref|ZP_01056974.1| glucose-inhibited division protein A [Roseobacter sp. MED193] gi|85824925|gb|EAQ45126.1| glucose-inhibited division protein A [Roseobacter sp. MED193] Length = 447 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 2/109 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q + +R IPGLE+ + R G ++N P L + K L AG Sbjct: 286 GFQTKMKYGAQTEVLRMIPGLEQASFARLGGIHRNTFLNSPTLLDDQMRLKSKPHLRFAG 345 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 QI G GY E+AA GL+AG +A + L+ + DS +G +I +T Sbjct: 346 QITGVEGYVESAAMGLLAGRMAAAEILGLELPQVPQ-DSAMGALIHHIT 393 >gi|163741153|ref|ZP_02148545.1| glucose-inhibited division protein A [Phaeobacter gallaeciensis 2.10] gi|161385506|gb|EDQ09883.1| glucose-inhibited division protein A [Phaeobacter gallaeciensis 2.10] Length = 447 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 2/109 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q + +R IPGLE + R G ++N P L + K S + AG Sbjct: 286 GFQTKMKYGAQTEVLRMIPGLENASFARLGGIHRNTFLNSPTLLDNQMRLKSRSNIRFAG 345 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 QI G GY E+AA GL+AG +A + L+ + DS +G +I +T Sbjct: 346 QITGVEGYVESAAMGLLAGRMAAAEILGLELPEVPQ-DSAMGALIHHIT 393 >gi|56750247|ref|YP_170948.1| tRNA (uracil-5-)-methyltransferase Gid [Synechococcus elongatus PCC 6301] gi|81300124|ref|YP_400332.1| tRNA (uracil-5-)-methyltransferase Gid [Synechococcus elongatus PCC 7942] gi|81170608|sp|Q5N5J0|TRMFO_SYNP6 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|123556891|sp|Q31NM4|TRMFO_SYNE7 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|56685206|dbj|BAD78428.1| glucose inhibited division protein [Synechococcus elongatus PCC 6301] gi|81169005|gb|ABB57345.1| gid protein [Synechococcus elongatus PCC 7942] Length = 466 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGL + +R G ++N P+ L +L+ ++ L AG Sbjct: 293 GFQTNLRWGEQKRIFQMIPGLSQAEFVRFGVMHRNTFVNAPQLLDASLQFRQRPTLLAAG 352 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ GT GY A A G +AG N+AR Sbjct: 353 QLIGTEGYSAAVAGGWLAGTNAAR 376 >gi|163853284|ref|YP_001641327.1| gid protein [Methylobacterium extorquens PA1] gi|163664889|gb|ABY32256.1| gid protein [Methylobacterium extorquens PA1] Length = 514 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 34/79 (43%), Positives = 40/79 (50%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + RTIPGLE R G Y++ P+ L TL K L AG Sbjct: 329 GFQTKLRHAEQVRVFRTIPGLENAEFARLGGLHRNTYLDSPRLLDATLRLKARPQLRFAG 388 Query: 368 QINGTTGYEEAAAQGLVAG 386 QI G GY E+AA GL+AG Sbjct: 389 QITGCEGYVESAAVGLMAG 407 Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust. Identities = 38/137 (27%), Positives = 59/137 (43%), Gaps = 26/137 (18%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAI-----GGL 53 + ++GGG AG EAA A+ G + L H T + + C+ + G Sbjct: 45 IHIVGGGLAGSEAAWQVAQGGRTVVLHEMRPVRATDAHHTDGLAELVCSNSFRSDDANGN 104 Query: 54 GKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILS 113 G L +E+ +LD L+ R ADA V G A+ DRE + A+ + Sbjct: 105 AVGLLHQEMRSLDSLIMRTADAH-------QVPAGGAL-----AVDREGFSRAVTAALED 152 Query: 114 QENLDVIQGEVAGFNTE 130 N+ +++ EVAG E Sbjct: 153 HPNITILREEVAGLPPE 169 >gi|316934010|ref|YP_004108992.1| gid protein [Rhodopseudomonas palustris DX-1] gi|315601724|gb|ADU44259.1| gid protein [Rhodopseudomonas palustris DX-1] Length = 478 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 1/83 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + RTIPGLE R G ++N PK L +L + L AG Sbjct: 296 GFQTKLKHGAQLRVFRTIPGLENAEFARLGGLHRNTFLNSPKLLDESLRLRASPRLRFAG 355 Query: 368 QINGTTGYEEAAAQGLVAGINSA 390 Q+ G GY E+A+ GL AG+++A Sbjct: 356 QMTGCEGYVESASVGLFAGLSAA 378 >gi|317486124|ref|ZP_07944969.1| m(5)U-54 methyltransferase [Bilophila wadsworthia 3_1_6] gi|316922609|gb|EFV43850.1| m(5)U-54 methyltransferase [Bilophila wadsworthia 3_1_6] Length = 445 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 91/410 (22%), Positives = 140/410 (34%), Gaps = 82/410 (20%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGL-------------G 54 + ++G G AGCE A A+ G + L K P + L G Sbjct: 6 IALVGAGLAGCECALQLARRGFAVTLFEQKPEAYSPAHSMPQLAELVCSNSLRSDELASG 65 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G + +E+ L + VADA + PA G DREL+ + + ++ Sbjct: 66 VGLIKQELRELGSALMAVADATRV----------PA--GKALAVDRELFAGKVTELVEAE 113 Query: 115 ENLDVIQGEVAGFNT------EKNIISSIVMQDNSMIRCSTVVLTTGT----FLRGVIHI 164 N+ +++ +A + E+ +IS+ + S+ +++ G F + I Sbjct: 114 PNITLVRKAIADLDDPALEGFERVVISAGPLASESL--SASIARAVGAEHLYFYDAIAPI 171 Query: 165 -------GKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQ 217 + R G+ N M D + LDG Sbjct: 172 VAADSIDMSIAFWGSRYGEPGEGDYLNCPMNED----EYRAFYQGLLDG----------- 216 Query: 218 FADERLIPFSFMTDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPS 277 +K+ +R+ E E H ++ A ++GP Sbjct: 217 -------------EKVASREFE-------QEKHFEGCMPVEALAARGEKTLAFGPLKPVG 256 Query: 278 IEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRP 337 D R G R + L PE N + G T L Q R +PGLE +R Sbjct: 257 FTDP--RTGRRPFALLQLRPENGNKTMFNLVGCQTKLTYPAQAVCFRKVPGLEHAEFVRF 314 Query: 338 GYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAG 386 G Y+N P L L K + LAGQI G GY E+ A GL G Sbjct: 315 GSMHRNTYVNAPVSLNEELALKSRPNVHLAGQITGVEGYVESIACGLWVG 364 >gi|205830468|sp|A9VXT4|TRMFO_METEP RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase Length = 474 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 34/79 (43%), Positives = 40/79 (50%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + RTIPGLE R G Y++ P+ L TL K L AG Sbjct: 289 GFQTKLRHAEQVRVFRTIPGLENAEFARLGGLHRNTYLDSPRLLDATLRLKARPQLRFAG 348 Query: 368 QINGTTGYEEAAAQGLVAG 386 QI G GY E+AA GL+AG Sbjct: 349 QITGCEGYVESAAVGLMAG 367 Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust. Identities = 38/137 (27%), Positives = 59/137 (43%), Gaps = 26/137 (18%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAI-----GGL 53 + ++GGG AG EAA A+ G + L H T + + C+ + G Sbjct: 5 IHIVGGGLAGSEAAWQVAQGGRTVVLHEMRPVRATDAHHTDGLAELVCSNSFRSDDANGN 64 Query: 54 GKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILS 113 G L +E+ +LD L+ R ADA V G A+ DRE + A+ + Sbjct: 65 AVGLLHQEMRSLDSLIMRTADAH-------QVPAGGAL-----AVDREGFSRAVTAALED 112 Query: 114 QENLDVIQGEVAGFNTE 130 N+ +++ EVAG E Sbjct: 113 HPNITILREEVAGLPPE 129 >gi|27379838|ref|NP_771367.1| tRNA (uracil-5-)-methyltransferase Gid [Bradyrhizobium japonicum USDA 110] gi|33301129|sp|Q89L21|TRMFO_BRAJA RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|27352991|dbj|BAC49992.1| glucose inhibited division protein [Bradyrhizobium japonicum USDA 110] Length = 475 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 33/83 (39%), Positives = 43/83 (51%), Gaps = 1/83 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + RTIPGLEK R G ++N PK L L + L AG Sbjct: 293 GFQTKLKYGEQQRIFRTIPGLEKAEFARLGGLHRNTFLNSPKLLDGQLRLRAQPRLRFAG 352 Query: 368 QINGTTGYEEAAAQGLVAGINSA 390 Q+ G GY E+A+ GL+AG+ +A Sbjct: 353 QMTGCEGYVESASVGLIAGLYAA 375 >gi|229815417|ref|ZP_04445749.1| hypothetical protein COLINT_02465 [Collinsella intestinalis DSM 13280] gi|229808950|gb|EEP44720.1| hypothetical protein COLINT_02465 [Collinsella intestinalis DSM 13280] Length = 448 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 46/164 (28%), Positives = 66/164 (40%), Gaps = 9/164 (5%) Query: 259 HSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEI 318 H AI G +K G + D R G R + L E G T L Sbjct: 240 HDAIRFGAMKPVG------LTDP--RTGRRPWAAVQLRSENAEGTAYNLVGFQTNLTFGE 291 Query: 319 QHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEA 378 Q + R IPGLE R G +++ + + + LAGQI GT GY EA Sbjct: 292 QKRVFRMIPGLENAEFFRYGVMHRNTFVDAPRVLDGSFAVPGTRVRLAGQITGTEGYTEA 351 Query: 379 AAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 A GL A +N+ + D + T ++ G ++ TSK ++ Sbjct: 352 VASGLFAALNTFADLSSTDRVSLPLTGAF-GSLVAYATSKDTVD 394 >gi|167647664|ref|YP_001685327.1| tRNA (uracil-5-)-methyltransferase Gid [Caulobacter sp. K31] gi|205830329|sp|B0T866|TRMFO_CAUSK RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|167350094|gb|ABZ72829.1| gid protein [Caulobacter sp. K31] Length = 480 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/111 (34%), Positives = 52/111 (46%), Gaps = 6/111 (5%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGL+ R G +IN P+ L +L K L AG Sbjct: 306 GFQTKLKHGAQAEVFRMIPGLQNAQFARLGGLHRNTFINSPRLLDRSLRMKVAPRLRFAG 365 Query: 368 QINGTTGYEEAAAQGLVAGINSA--RKSNKLDCICFSRTDSYIGVMIDDLT 416 Q+ G GY E+AA GL+AG +A R LD + +G ++D +T Sbjct: 366 QMTGVEGYVESAATGLLAGRFAAAERLGKTLDA---PPPTTALGALVDHVT 413 >gi|144897799|emb|CAM74663.1| Gid protein [Magnetospirillum gryphiswaldense MSR-1] Length = 451 Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust. Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 2/118 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + RTIPGLE R G ++N P+ L L K L LAG Sbjct: 289 GFQTKLRHGEQTRIFRTIPGLEAAEFARLGGLHRNTFVNGPRVLDQQLRLKAQPRLRLAG 348 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 QI G GY E+ + G +AG+ ++ ++ D + T S +G ++ +T + Y+ Sbjct: 349 QITGCEGYVESTSIGFLAGLAASAQALGHDFVAPPPT-SALGAILTHVTGGAHADTYQ 405 >gi|237742002|ref|ZP_04572483.1| tRNA (uracil-5-)-methyltransferase Gid [Fusobacterium sp. 4_1_13] gi|229429650|gb|EEO39862.1| tRNA (uracil-5-)-methyltransferase Gid [Fusobacterium sp. 4_1_13] Length = 478 Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/112 (34%), Positives = 51/112 (45%), Gaps = 4/112 (3%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF-PTLETKKISGLFLAG 367 G T L Q + IPGLE IR G +IN +L TL K ++ AG Sbjct: 323 GFQTNLKFGEQKRVFSMIPGLENAEFIRYGVMHRNTFINSTKLLDKTLRLKNKDNIYFAG 382 Query: 368 QINGTTGYEEAAAQGLVAGINSA-RKSNKLDCICFSRTDSYIGVMIDDLTSK 418 QI G GY A A G+ IN A R NK + I S IG +++ +T + Sbjct: 383 QITGGEGYVTAIATGMYVAINVANRLENKKEFIL--EDISEIGAIVNYITEE 432 >gi|222085798|ref|YP_002544328.1| glucose inhibited division protein A [Agrobacterium radiobacter K84] gi|221723246|gb|ACM26402.1| glucose inhibited division protein A [Agrobacterium radiobacter K84] Length = 483 Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust. Identities = 34/79 (43%), Positives = 39/79 (49%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE R G YIN P L +L K GL AG Sbjct: 293 GFQTKLKYGAQAEIFRLIPGLENAEFARLGGLHRNTYINSPTLLDRSLTLKSRPGLRFAG 352 Query: 368 QINGTTGYEEAAAQGLVAG 386 QI G GY E+A+ GL+AG Sbjct: 353 QITGCEGYVESASIGLLAG 371 >gi|326387733|ref|ZP_08209339.1| tRNA (uracil-5-)-methyltransferase Gid [Novosphingobium nitrogenifigens DSM 19370] gi|326207779|gb|EGD58590.1| tRNA (uracil-5-)-methyltransferase Gid [Novosphingobium nitrogenifigens DSM 19370] Length = 439 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/118 (33%), Positives = 57/118 (48%), Gaps = 2/118 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + RTIPGLE+ R G +IN P L L ++ + AG Sbjct: 282 GFQTKLKHAEQVRLFRTIPGLEQAEFARLGGLHRNTFINSPVVLDRQLRLRRDDRIRFAG 341 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 QI G GY E+AA G++AG+ +A + D RT + +G ++ +T E Y+ Sbjct: 342 QITGCEGYVESAAIGMLAGLMTAAQFAGKDWTPPPRT-TALGALLAHVTGDAEAETYQ 398 >gi|239616442|ref|YP_002939764.1| gid protein [Kosmotoga olearia TBF 19.5.1] gi|239505273|gb|ACR78760.1| gid protein [Kosmotoga olearia TBF 19.5.1] Length = 437 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 50/172 (29%), Positives = 69/172 (40%), Gaps = 20/172 (11%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IP LE +R G Y+N PK L L +K LF G Sbjct: 281 GFQTRLKWGEQKRVFRIIPALEHAEFVRYGVMHRNTYLNSPKILNRDLRSKGYPNLFFCG 340 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMF 427 QI G GY EA G +N + K + + +G +I+ +T G Sbjct: 341 QITGLEGYVEAITSGRFVALN-VMELVKTGSTFYLPEKTMLGALINHITVSG-------- 391 Query: 428 TSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 R+ L P A+ L P +K ER K+ + I+E L+ LK Sbjct: 392 ------RVPLSPVYANYGLLP-PVKAKGKRERNLKKAERAIEE---LKKFLK 433 >gi|85708693|ref|ZP_01039759.1| glucose-inhibited division protein A [Erythrobacter sp. NAP1] gi|85690227|gb|EAQ30230.1| glucose-inhibited division protein A [Erythrobacter sp. NAP1] Length = 461 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/83 (37%), Positives = 42/83 (50%), Gaps = 1/83 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + RTIPGLE R G ++N P+ L L + + AG Sbjct: 300 GFQTKLKYGAQVELFRTIPGLENAEFARLGGLHRNTFLNSPRVLDRQLRLRAAPHIRFAG 359 Query: 368 QINGTTGYEEAAAQGLVAGINSA 390 Q+ G GY E+AA GLV+G+ +A Sbjct: 360 QVTGCEGYVESAAIGLVSGMMTA 382 >gi|302823768|ref|XP_002993533.1| hypothetical protein SELMODRAFT_431601 [Selaginella moellendorffii] gi|300138664|gb|EFJ05425.1| hypothetical protein SELMODRAFT_431601 [Selaginella moellendorffii] Length = 626 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 19/116 (16%) Query: 81 RVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQ 140 RVLN KGPAV R Q D+ + M++ + + ENL F E + +V + Sbjct: 464 RVLNRSKGPAVWALRAQTDKREHAREMKKVVETTENL---------FIRESMVTEVLVGR 514 Query: 141 DNSMIRCST----------VVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSF 186 ++ + T VVLTT T + G I +G+ + AG G+S S L +F Sbjct: 515 NDDVEGVGTFFGVSFFAPAVVLTTRTLMNGKIWVGRKSMSAGGAGESASQGLTENF 570 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 21/27 (77%), Positives = 22/27 (81%) Query: 365 LAGQINGTTGYEEAAAQGLVAGINSAR 391 GQI GTTGYEEAAAQG VAG+NS R Sbjct: 570 FCGQIIGTTGYEEAAAQGFVAGVNSTR 596 >gi|260494671|ref|ZP_05814801.1| tRNA:m(5)U-54 methyltransferase [Fusobacterium sp. 3_1_33] gi|260197833|gb|EEW95350.1| tRNA:m(5)U-54 methyltransferase [Fusobacterium sp. 3_1_33] Length = 434 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/112 (34%), Positives = 51/112 (45%), Gaps = 4/112 (3%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF-PTLETKKISGLFLAG 367 G T L Q + IPGLE IR G +IN +L TL K ++ AG Sbjct: 279 GFQTNLKFGEQKRVFSMIPGLENAEFIRYGVMHRNTFINSTKLLDKTLRLKNRDNIYFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSA-RKSNKLDCICFSRTDSYIGVMIDDLTSK 418 QI G GY A A G+ IN A R NK + I S IG +++ +T + Sbjct: 339 QITGGEGYVTAIATGMYVAINVANRLENKKEFIL--EDISEIGAIVNYITEE 388 >gi|256845342|ref|ZP_05550800.1| tRNA:m(5)U-54 methyltransferase [Fusobacterium sp. 3_1_36A2] gi|256718901|gb|EEU32456.1| tRNA:m(5)U-54 methyltransferase [Fusobacterium sp. 3_1_36A2] Length = 434 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/112 (34%), Positives = 51/112 (45%), Gaps = 4/112 (3%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF-PTLETKKISGLFLAG 367 G T L Q + IPGLE IR G +IN +L TL K ++ AG Sbjct: 279 GFQTNLKFGEQKRVFSMIPGLENAEFIRYGVMHRNTFINSTKLLDKTLRLKNKDNIYFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSA-RKSNKLDCICFSRTDSYIGVMIDDLTSK 418 QI G GY A A G+ IN A R NK + I S IG +++ +T + Sbjct: 339 QITGGEGYVTAIATGMYVAINVANRLENKKEFIL--EDISEIGAIVNYITEE 388 >gi|254505219|ref|ZP_05117370.1| tRNA:m(5)U-54 methyltransferase [Labrenzia alexandrii DFL-11] gi|222441290|gb|EEE47969.1| tRNA:m(5)U-54 methyltransferase [Labrenzia alexandrii DFL-11] Length = 472 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 2/109 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE R G ++N PK L TL K L AG Sbjct: 288 GFQTKLKYGAQGDIFKMIPGLENAQFARLGGLHRNTFLNSPKVLDDTLRLKADPRLRFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 QI G GY E+A+ G +AG+ + ++ D I +T + +G ++ +T Sbjct: 348 QITGCEGYVESASVGCMAGLFAVMEAKGQDIITPPQT-TAMGALLGHIT 395 >gi|295100360|emb|CBK97905.1| tRNA:m(5)U-54 methyltransferase [Faecalibacterium prausnitzii L2-6] Length = 458 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 57/215 (26%), Positives = 83/215 (38%), Gaps = 11/215 (5%) Query: 261 AIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQH 320 A D +GP + D R G R + L E + G T L Q Sbjct: 253 AARGADTMRFGPLRPVGLIDP--RTGHRPWANVQLRAENKERTLYNIVGFQTNLKWGEQK 310 Query: 321 QFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAA 379 + IPGL +R G +++ P+ L L K+ +F AGQI G GY E+ Sbjct: 311 RVFSMIPGLGNAEFVRYGVMHRNTFLDAPRVLSAGLCLKEHPNVFFAGQITGFEGYMEST 370 Query: 380 AQGLVAGIN-SARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLR 438 A GL+A N AR K + D+ G +I LT++ + F L Sbjct: 371 ACGLLAARNIYARLEGKE--LPAPPIDTMCGALIQYLTTEN-----KHFQPMGANMGILP 423 Query: 439 PDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNF 473 P D R ++ + ER F +++ E NF Sbjct: 424 PLPEDQRPRDKRLRYMAVAERAVASFQQWLDENNF 458 >gi|322434482|ref|YP_004216694.1| gid protein [Acidobacterium sp. MP5ACTX9] gi|321162209|gb|ADW67914.1| gid protein [Acidobacterium sp. MP5ACTX9] Length = 446 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 1/95 (1%) Query: 293 IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKEL 351 + L E L D G L Q + +R IPGLE +R G YI+ P L Sbjct: 264 VQLRQENLRADSYNLVGFQNHLKFGEQARVLRLIPGLEHATFLRYGQIHRNTYIHAPSLL 323 Query: 352 FPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAG 386 TL+ + + +AGQ++G GY E+ A G++AG Sbjct: 324 TETLQLRARPDILIAGQLSGVEGYTESIASGMLAG 358 >gi|291544311|emb|CBL17420.1| tRNA:m(5)U-54 methyltransferase [Ruminococcus sp. 18P13] Length = 442 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/84 (36%), Positives = 40/84 (47%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGL +R G ++N P+ L T + L+ AG Sbjct: 276 GFQTNLKFGEQKRVFSMIPGLAHAEFMRYGVMHRNSFLNSPRLLTDTYCMRTNPDLYFAG 335 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 QI G GY E+A GLVAG+N R Sbjct: 336 QITGVEGYMESAGSGLVAGLNMVR 359 >gi|115524909|ref|YP_781820.1| tRNA (uracil-5-)-methyltransferase Gid [Rhodopseudomonas palustris BisA53] gi|122295920|sp|Q07MJ4|TRMFO_RHOP5 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|115518856|gb|ABJ06840.1| gid protein [Rhodopseudomonas palustris BisA53] Length = 476 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/83 (38%), Positives = 42/83 (50%), Gaps = 1/83 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + RTIPGLE + R G ++N PK L L + L AG Sbjct: 294 GFQTKLKHGEQARIFRTIPGLENADFARLGGLHRNTFLNSPKLLDSQLRLRAEPRLRFAG 353 Query: 368 QINGTTGYEEAAAQGLVAGINSA 390 Q+ G GY E+A GL+AG+ +A Sbjct: 354 QMTGCEGYVESAGIGLIAGLCAA 376 >gi|254303088|ref|ZP_04970446.1| glucose inhibited division protein A [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323280|gb|EDK88530.1| glucose inhibited division protein A [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 434 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/112 (34%), Positives = 51/112 (45%), Gaps = 4/112 (3%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF-PTLETKKISGLFLAG 367 G T L Q + IPGLE IR G +IN +L TL K ++ AG Sbjct: 279 GFQTNLKFGEQKRVFSMIPGLENAEFIRYGVMHRNTFINSTKLLDKTLRLKNRDNIYFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSA-RKSNKLDCICFSRTDSYIGVMIDDLTSK 418 QI G GY A A G+ IN A R NK + I S IG +++ +T + Sbjct: 339 QITGGEGYVTAIATGMYVAINVANRLENKKEFIL--EDISEIGAIVNYITEE 388 >gi|149184578|ref|ZP_01862896.1| glucose-inhibited division protein A [Erythrobacter sp. SD-21] gi|148831898|gb|EDL50331.1| glucose-inhibited division protein A [Erythrobacter sp. SD-21] Length = 459 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 37/109 (33%), Positives = 52/109 (47%), Gaps = 2/109 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + RTIPGLE R G +IN P L L + + AG Sbjct: 299 GFQTKLKYGAQIELFRTIPGLENAEFARLGGLHRNTFINSPLVLDRQLRLRGGEHIRFAG 358 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 QI G GY E++A GL+AG+ +A + D RT ++ G ++ +T Sbjct: 359 QITGCEGYVESSAVGLMAGMMAASELAGHDWSPPPRTTAF-GALLSHIT 406 >gi|103486647|ref|YP_616208.1| tRNA (uracil-5-)-methyltransferase Gid [Sphingopyxis alaskensis RB2256] gi|123379926|sp|Q1GTZ7|TRMFO_SPHAL RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|98976724|gb|ABF52875.1| gid protein [Sphingopyxis alaskensis RB2256] Length = 449 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 33/78 (42%), Positives = 37/78 (47%), Gaps = 1/78 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFP-TLETKKISGLFLAG 367 G T L Q + RTIPGLEK R G +I EL L K + AG Sbjct: 288 GFQTKLKHAEQVRLFRTIPGLEKAEFARLGGLHRNSFIRSPELLDRQLRLKSAPHIRFAG 347 Query: 368 QINGTTGYEEAAAQGLVA 385 QI G GY E+AA GLVA Sbjct: 348 QITGCEGYVESAAIGLVA 365 >gi|257469329|ref|ZP_05633423.1| tRNA (uracil-5-)-methyltransferase Gid [Fusobacterium ulcerans ATCC 49185] Length = 448 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/112 (34%), Positives = 52/112 (46%), Gaps = 4/112 (3%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF-PTLETKKISGLFLAG 367 G T L Q + IPGLE + IR G +I+ L TL+ K ++ AG Sbjct: 291 GFQTNLKWGEQKRVFSMIPGLENADFIRYGVMHRNTFIDSSRLLDETLKLKTKDNIYFAG 350 Query: 368 QINGTTGYEEAAAQGLVAGINSARK-SNKLDCICFSRTDSYIGVMIDDLTSK 418 QI G+ GY + + G +A IN A K K I R S IG MI +T + Sbjct: 351 QITGSEGYVSSISTGAMAAINIAHKLLGKAPFILDDR--SAIGAMIKYVTEE 400 Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 13/81 (16%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGG----L 53 +VI++G G AGCEAA AK G L HK + C+ ++GG Sbjct: 16 EVIIVGAGLAGCEAAYQLAKRGIKVKLYEMKSKKMTEAHKNKYFAELVCSNSLGGDNLAN 75 Query: 54 GKGHLVREIDALDGLMGRVAD 74 G + E+ LD L+ ++AD Sbjct: 76 ASGLMKEELRKLDSLLIKIAD 96 >gi|258645673|ref|ZP_05733142.1| tRNA:M(5)U-54 methyltransferase [Dialister invisus DSM 15470] gi|260403040|gb|EEW96587.1| tRNA:M(5)U-54 methyltransferase [Dialister invisus DSM 15470] Length = 432 Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust. Identities = 30/76 (39%), Positives = 38/76 (50%), Gaps = 1/76 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGL +R G YI+ P L T+ET+ GLF AG Sbjct: 278 GFQTHLKWGEQKRVFGMIPGLAGAEFVRYGVMHRNTYIHSPDLLEATMETRARKGLFFAG 337 Query: 368 QINGTTGYEEAAAQGL 383 Q+ G GY E+AA G+ Sbjct: 338 QMTGVEGYVESAASGI 353 >gi|307154985|ref|YP_003890369.1| gid protein [Cyanothece sp. PCC 7822] gi|306985213|gb|ADN17094.1| gid protein [Cyanothece sp. PCC 7822] Length = 446 Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust. Identities = 41/110 (37%), Positives = 57/110 (51%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE +R G +IN P+ L P+L+ K L AG Sbjct: 282 GFQTNLKWGEQKRVFRLIPGLEAAEFVRMGVMHRNTFINSPQLLGPSLQFKNRPTLLAAG 341 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ GT GY AAA G +AG N+AR L+ + T + +G + D ++S Sbjct: 342 QLVGTEGYTAAAAGGWLAGTNAARLVLGLEPVTMPVT-TMMGALFDFISS 390 >gi|317970344|ref|ZP_07971734.1| tRNA (uracil-5-)-methyltransferase Gid [Synechococcus sp. CB0205] Length = 367 Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust. Identities = 36/113 (31%), Positives = 52/113 (46%), Gaps = 2/113 (1%) Query: 267 IKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTI 326 I + PR+ + D+ VR +R + L E + + G T L Q + +R I Sbjct: 255 IGLWDPRWG-DVNDRDVRRAKRAYAVVQLRQEDKDGRLWNLVGFQTNLKWGEQKRVLRMI 313 Query: 327 PGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEA 378 PGLE +R G ++ P+ L PTL+ + L AGQI GT GY A Sbjct: 314 PGLENAEFVRFGVMHRNTFLEAPQLLDPTLQFRSRPTLLAAGQITGTEGYAAA 366 >gi|317063576|ref|ZP_07928061.1| tRNA (uracil-5-)-methyltransferase Gid [Fusobacterium ulcerans ATCC 49185] gi|313689252|gb|EFS26087.1| tRNA (uracil-5-)-methyltransferase Gid [Fusobacterium ulcerans ATCC 49185] Length = 437 Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/112 (34%), Positives = 52/112 (46%), Gaps = 4/112 (3%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF-PTLETKKISGLFLAG 367 G T L Q + IPGLE + IR G +I+ L TL+ K ++ AG Sbjct: 280 GFQTNLKWGEQKRVFSMIPGLENADFIRYGVMHRNTFIDSSRLLDETLKLKTKDNIYFAG 339 Query: 368 QINGTTGYEEAAAQGLVAGINSARK-SNKLDCICFSRTDSYIGVMIDDLTSK 418 QI G+ GY + + G +A IN A K K I R S IG MI +T + Sbjct: 340 QITGSEGYVSSISTGAMAAINIAHKLLGKAPFILDDR--SAIGAMIKYVTEE 389 Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 13/81 (16%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGG----L 53 +VI++G G AGCEAA AK G L HK + C+ ++GG Sbjct: 5 EVIIVGAGLAGCEAAYQLAKRGIKVKLYEMKSKKMTEAHKNKYFAELVCSNSLGGDNLAN 64 Query: 54 GKGHLVREIDALDGLMGRVAD 74 G + E+ LD L+ ++AD Sbjct: 65 ASGLMKEELRKLDSLLIKIAD 85 >gi|218245673|ref|YP_002371044.1| tRNA (uracil-5-)-methyltransferase Gid [Cyanothece sp. PCC 8801] gi|257058720|ref|YP_003136608.1| tRNA (uracil-5-)-methyltransferase Gid [Cyanothece sp. PCC 8802] gi|218166151|gb|ACK64888.1| gid protein [Cyanothece sp. PCC 8801] gi|256588886|gb|ACU99772.1| gid protein [Cyanothece sp. PCC 8802] Length = 459 Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust. Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE +R G +IN P+ L TL+ K L AG Sbjct: 294 GFQTNLKWGEQKRIFRLIPGLETAEFVRMGVMHRNTFINSPQLLEATLQFKSRPTLLAAG 353 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ GT GY AAA G +AG N+AR + +LD + T + +G + + ++S Sbjct: 354 QLIGTEGYSAAAAGGWLAGTNAARLALRLDPLKMPET-TMMGALFEFISS 402 >gi|227821950|ref|YP_002825920.1| protein Gid-like protein [Sinorhizobium fredii NGR234] gi|227340949|gb|ACP25167.1| protein Gid-like protein [Sinorhizobium fredii NGR234] Length = 587 Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust. Identities = 38/90 (42%), Positives = 43/90 (47%), Gaps = 3/90 (3%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q R IPGLE R G YIN P L +L K GL AG Sbjct: 408 GFQTKLKYGAQTDVFRMIPGLENAEFARLGGLHRNTYINSPILLDGSLTLKSRPGLRFAG 467 Query: 368 QINGTTGYEEAAAQGLVAGINSA--RKSNK 395 QI G GY E+A+ GL+AG +A RK K Sbjct: 468 QITGCEGYVESASIGLLAGRFAAAERKGEK 497 >gi|188583546|ref|YP_001926991.1| tRNA (uracil-5-)-methyltransferase Gid [Methylobacterium populi BJ001] gi|205830308|sp|B1ZES7|TRMFO_METPB RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|179347044|gb|ACB82456.1| gid protein [Methylobacterium populi BJ001] Length = 474 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 33/79 (41%), Positives = 40/79 (50%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + RTIPGLE R G Y++ P+ L TL + L AG Sbjct: 289 GFQTKLRHAEQVRIFRTIPGLENAEFARLGGLHRNTYLDSPRLLDATLRLRARPQLRFAG 348 Query: 368 QINGTTGYEEAAAQGLVAG 386 QI G GY E+AA GL+AG Sbjct: 349 QITGCEGYVESAAVGLMAG 367 >gi|197105412|ref|YP_002130789.1| glucose inhibited division protein [Phenylobacterium zucineum HLK1] gi|226707907|sp|B4RDH0|TRMFO_PHEZH RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|196478832|gb|ACG78360.1| glucose inhibited division protein [Phenylobacterium zucineum HLK1] Length = 466 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 33/79 (41%), Positives = 39/79 (49%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLEK R G +IN P+ L L K L AG Sbjct: 289 GFQTKLKHGAQTEVFRMIPGLEKAVFARLGGLHRNTFINSPRLLDGVLRLKAQPRLRFAG 348 Query: 368 QINGTTGYEEAAAQGLVAG 386 Q+ G GY E+AA GL+AG Sbjct: 349 QVTGVEGYVESAAVGLLAG 367 >gi|66576082|gb|AAY51648.1| mitochondrial MTO1 [Pan troglodytes] gi|66576084|gb|AAY51649.1| mitochondrial MTO1 [Pongo pygmaeus] Length = 76 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 25/76 (32%) Query: 317 EIQHQFIRTIPGLEKVNIIRP-------------------------GYAIEYDYINPKEL 351 E+Q + I I GLEK +I+P GY ++YDY++P+++ Sbjct: 1 ELQEKMITCIRGLEKAKVIQPDGVLLLLPRMECNGAISAHHNLPLPGYGVQYDYLDPRQI 60 Query: 352 FPTLETKKISGLFLAG 367 P+LET + LF AG Sbjct: 61 TPSLETHLVQRLFFAG 76 >gi|206895790|ref|YP_002247058.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gid [Coprothermobacter proteolyticus DSM 5265] gi|254789170|sp|B5Y8G1|TRMFO_COPPD RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|206738407|gb|ACI17485.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gid [Coprothermobacter proteolyticus DSM 5265] Length = 432 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 41/131 (31%), Positives = 58/131 (44%), Gaps = 25/131 (19%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGL---- 53 DV VIGGG AG EAA A LG L HKTS + + C+ ++G L Sbjct: 2 DVWVIGGGLAGSEAALTLADLGFPVTLFEMRPAVMTPAHKTSKLAELVCSNSLGSLSTDN 61 Query: 54 GKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILS 113 KG L+ E+ L + +A A I K V DREL+ ++ + S Sbjct: 62 AKGELLFELKVLGSSLVNLAFEAQI-----GGDKALVV-------DRELFSTLVEDAVRS 109 Query: 114 QENLDVIQGEV 124 N+ V++ E+ Sbjct: 110 HRNITVVRAEI 120 Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 1/83 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQ 368 G T + Q + +P + +R G I + P + +++ F AGQ Sbjct: 277 GFQTGISHTEQISIFKQLPAFKNAVFVRLG-QIHQNRFLPGVVNKFFQSRTNRLWFYAGQ 335 Query: 369 INGTTGYEEAAAQGLVAGINSAR 391 GT GY EA A GL AGIN AR Sbjct: 336 FTGTEGYLEAIAGGLWAGINVAR 358 >gi|288958303|ref|YP_003448644.1| glucose inhibited division protein Gid [Azospirillum sp. B510] gi|288910611|dbj|BAI72100.1| glucose inhibited division protein Gid [Azospirillum sp. B510] Length = 447 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 31/79 (39%), Positives = 39/79 (49%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE R G ++N P+ L L K + L AG Sbjct: 292 GFQTKLRHAEQARIFRMIPGLENAEFARLGGMHRNTFLNSPRILDGALRLKSLPRLRFAG 351 Query: 368 QINGTTGYEEAAAQGLVAG 386 Q+ G GY E+AA GL+AG Sbjct: 352 QVTGCEGYVESAAVGLLAG 370 >gi|66576096|gb|AAY51655.1| mitochondrial MTO1 [Theropithecus gelada] Length = 76 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 25/76 (32%) Query: 317 EIQHQFIRTIPGLEKVNIIRP-------------------------GYAIEYDYINPKEL 351 E+Q + I I GLEK +I+P GY ++YDY++P+++ Sbjct: 1 ELQEKMITCIRGLEKAKVIQPDGVLLLLPRMECNGVISPHHNLSLPGYGVQYDYLDPRQI 60 Query: 352 FPTLETKKISGLFLAG 367 P+LET + LF AG Sbjct: 61 TPSLETHLVQRLFFAG 76 >gi|207108622|ref|ZP_03242784.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Helicobacter pylori HPKX_438_CA4C1] Length = 61 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 26/56 (46%), Positives = 38/56 (67%), Gaps = 2/56 (3%) Query: 564 IPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYI--KKNT 617 IPK F + +P LS E EKL +P +L +AS+I G+TPA L++L +YI +KN+ Sbjct: 6 IPKGFVFKGIPGLSLEAVEKLEKFRPKSLFEASEISGITPANLDVLHLYIHLRKNS 61 >gi|66576086|gb|AAY51650.1| mitochondrial MTO1 [Hylobates lar] Length = 76 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 25/76 (32%) Query: 317 EIQHQFIRTIPGLEKVNIIRP-------------------------GYAIEYDYINPKEL 351 E+Q + I I GLEK +I+P GY ++YDY++P+++ Sbjct: 1 ELQEKMITCIRGLEKAKVIQPDGVLLLLPRMECNGAISSHHNLPLPGYGVQYDYLDPRQI 60 Query: 352 FPTLETKKISGLFLAG 367 P+LET + LF AG Sbjct: 61 TPSLETHLVQRLFFAG 76 >gi|220909352|ref|YP_002484663.1| tRNA (uracil-5-)-methyltransferase Gid [Cyanothece sp. PCC 7425] gi|219865963|gb|ACL46302.1| gid protein [Cyanothece sp. PCC 7425] Length = 463 Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust. Identities = 36/84 (42%), Positives = 47/84 (55%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + + IPGLE +R G ++N P+ LFPTL+ K+ L AG Sbjct: 292 GFQTNLRWGEQKRVFQMIPGLEAAEFVRLGVMHRNTFLNAPELLFPTLQFKQRPTLLAAG 351 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ GT GY AAA G +AG N+AR Sbjct: 352 QLIGTEGYTAAAAGGWLAGTNAAR 375 >gi|66576042|gb|AAY51628.1| mitochondrial MTO1-3 [Homo sapiens] Length = 76 Score = 48.5 bits (114), Expect = 0.004, Method: Composition-based stats. Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 25/76 (32%) Query: 317 EIQHQFIRTIPGLEKVNIIRP-------------------------GYAIEYDYINPKEL 351 E+Q + I I GLEK +I+P GY ++YDY++P+++ Sbjct: 1 ELQEKMITCIRGLEKAKVIQPDGVLLLLPRMECNGAISAYHNLPLPGYGVQYDYLDPRQI 60 Query: 352 FPTLETKKISGLFLAG 367 P+LET + LF AG Sbjct: 61 TPSLETHLVQRLFFAG 76 >gi|313679201|ref|YP_004056940.1| glucose-inhibited division protein a [Oceanithermus profundus DSM 14977] gi|313151916|gb|ADR35767.1| glucose-inhibited division protein A [Oceanithermus profundus DSM 14977] Length = 231 Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust. Identities = 45/186 (24%), Positives = 73/186 (39%), Gaps = 34/186 (18%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+V+G G +G EAA A+ G + L+T ++ P E A Sbjct: 4 YDVLVVGAGPSGSEAAWALARRGFAVGLVTDSLDSVYRPEVPP------------EGAAP 51 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G + +A+AA L+ + A+ G ENL ++Q V Sbjct: 52 AGSL--LAEAASGDLWTLHRRAKYALEG--------------------LENLHLLQSSVV 89 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E+ + + + +R VVL G+FL + G L+ AGR+G++ L+ Sbjct: 90 ALLLEEGRAAGVRTWEGFDLRAGAVVLAVGSFLGARLSAGALEEAAGRLGEAAYPDLYEH 149 Query: 186 FMKFDF 191 F Sbjct: 150 LQGLGF 155 >gi|303232720|ref|ZP_07319405.1| tRNA:M(5)U-54 methyltransferase [Atopobium vaginae PB189-T1-4] gi|302481206|gb|EFL44281.1| tRNA:M(5)U-54 methyltransferase [Atopobium vaginae PB189-T1-4] Length = 446 Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust. Identities = 35/109 (32%), Positives = 45/109 (41%), Gaps = 1/109 (0%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQ 368 G T L Q + R IPGLE R G +I+ + S L AGQ Sbjct: 283 GFQTNLTWPEQKRVFRLIPGLEHAEFFRYGVMHRNSFIDSPHVLNATFALPDSTLRFAGQ 342 Query: 369 INGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 I GT GY EA A GL A +N + C T ++ G ++ TS Sbjct: 343 ITGTEGYVEAIASGLYAALNCYAELIDKPCALLPATSAF-GSLVQYATS 390 >gi|222148957|ref|YP_002549914.1| tRNA (uracil-5-)-methyltransferase Gid [Agrobacterium vitis S4] gi|221735943|gb|ACM36906.1| glucose inhibited division protein A [Agrobacterium vitis S4] Length = 485 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 42/136 (30%), Positives = 58/136 (42%), Gaps = 5/136 (3%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE R G YI+ P L +L K GL AG Sbjct: 293 GFQTKLRYGAQAEIFRMIPGLENAEFARLGGLHRNTYIHSPVLLDQSLSLKSRPGLRFAG 352 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL---EPY 424 QI G GY E+A+ GL+AG A K + + +G +++ +T ++ EP Sbjct: 353 QITGCEGYVESASIGLLAG-RFAAAERKGEAFSPPPVTTALGALLNHITGGHIVSNDEPG 411 Query: 425 RMFTSRAEYRISLRPD 440 + L PD Sbjct: 412 KKSFQPMNINFGLFPD 427 >gi|90419396|ref|ZP_01227306.1| gid protein [Aurantimonas manganoxydans SI85-9A1] gi|90336333|gb|EAS50074.1| gid protein [Aurantimonas manganoxydans SI85-9A1] Length = 473 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 33/79 (41%), Positives = 38/79 (48%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q +R IPGLE R G Y+N P L PTL K + AG Sbjct: 289 GFQTKLKYGAQAAVLRMIPGLENAEFARLGGLHRNTYLNSPTLLDPTLRLKVRPHIRFAG 348 Query: 368 QINGTTGYEEAAAQGLVAG 386 QI G GY E+AA GL+ G Sbjct: 349 QITGCEGYVESAAVGLMTG 367 >gi|90424269|ref|YP_532639.1| tRNA (uracil-5-)-methyltransferase Gid [Rhodopseudomonas palustris BisB18] gi|122476120|sp|Q213W6|TRMFO_RHOPB RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|90106283|gb|ABD88320.1| gid protein [Rhodopseudomonas palustris BisB18] Length = 476 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 2/109 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R+IPGLE R G ++N PK L L + L AG Sbjct: 293 GFQTKLKHGEQSRIFRSIPGLENAEFARLGGLHRNTFLNSPKLLDQQLRLRAEPRLRFAG 352 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 Q+ G GY E+A+ GL+AG+ +A ++ + + + + +G ++ +T Sbjct: 353 QMTGCEGYVESASIGLIAGLYAAAEARDI-ALAPPPSTTALGALLGHIT 400 >gi|126657809|ref|ZP_01728963.1| glucose-inhibited division protein A [Cyanothece sp. CCY0110] gi|126621026|gb|EAZ91741.1| glucose-inhibited division protein A [Cyanothece sp. CCY0110] Length = 460 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 42/110 (38%), Positives = 57/110 (51%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE +R G +IN P+ L PTL+ K L AG Sbjct: 293 GFQTNLRWGEQKRVFRFIPGLENAEFVRMGVMHRNTFINSPQLLDPTLQFKSRPTLLAAG 352 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ GT GY AAA G +AG N+AR + L+ I T +G + + ++S Sbjct: 353 QLIGTEGYTAAAAGGWLAGTNAARIALGLEPITLPST-MMMGALFEFISS 401 >gi|329889957|ref|ZP_08268300.1| tRNA:m5U-54 methyltransferase [Brevundimonas diminuta ATCC 11568] gi|328845258|gb|EGF94822.1| tRNA:m5U-54 methyltransferase [Brevundimonas diminuta ATCC 11568] Length = 468 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 3/115 (2%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q R IPGLE R G ++N PK L + K + L AG Sbjct: 298 GFQTKLKYGAQTDVFRMIPGLENAQFARLGGLHRNTFLNSPKLLDKQMRLKALPRLRFAG 357 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 Q+ G GY E+AA GL+ G +A ++ D + ++ +G +++ +T G LE Sbjct: 358 QVTGVEGYVESAAMGLLTGRLAAAQALGRD-LTPPPPETAMGALVEHITG-GHLE 410 >gi|296328242|ref|ZP_06870772.1| (FADH(2)-oxidizing) [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296154642|gb|EFG95429.1| (FADH(2)-oxidizing) [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 434 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 38/112 (33%), Positives = 51/112 (45%), Gaps = 4/112 (3%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF-PTLETKKISGLFLAG 367 G T L Q + IPGLE IR G +IN +L TL K ++ AG Sbjct: 279 GFQTNLKFGEQKRVFSMIPGLENAEFIRYGVMHRNTFINSTKLLDKTLRLKNRDNIYFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSA-RKSNKLDCICFSRTDSYIGVMIDDLTSK 418 QI G GY A A G+ +N A R NK + I S IG +++ +T + Sbjct: 339 QITGGEGYVTAIATGMYVAMNVANRLENKKEFIL--EDISEIGAIVNYITEE 388 >gi|325293053|ref|YP_004278917.1| tRNA uracil-5-methyltransferase Gid [Agrobacterium sp. H13-3] gi|325060906|gb|ADY64597.1| tRNA uracil-5-methyltransferase Gid [Agrobacterium sp. H13-3] Length = 485 Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust. Identities = 32/79 (40%), Positives = 39/79 (49%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q R IPGL+ R G YI+ P L P+L+ K L AG Sbjct: 296 GFQTKLKYGAQADVFRMIPGLQNAEFARLGGLHRNTYIDSPVLLDPSLKLKSRPDLRFAG 355 Query: 368 QINGTTGYEEAAAQGLVAG 386 QI G GY E+A+ GL+AG Sbjct: 356 QITGCEGYVESASVGLLAG 374 >gi|170747991|ref|YP_001754251.1| gid protein [Methylobacterium radiotolerans JCM 2831] gi|205830309|sp|B1M5H7|TRMFO_METRJ RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|170654513|gb|ACB23568.1| gid protein [Methylobacterium radiotolerans JCM 2831] Length = 475 Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust. Identities = 32/79 (40%), Positives = 40/79 (50%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE+ R G Y++ P+ L TL + L AG Sbjct: 288 GFQTKLTYSEQVRIFRMIPGLERAEFARLGGLHRNTYLDSPRLLDATLRLRARPSLRFAG 347 Query: 368 QINGTTGYEEAAAQGLVAG 386 QI G GY E+AA GL+AG Sbjct: 348 QITGCEGYVESAAVGLMAG 366 >gi|118589134|ref|ZP_01546541.1| glucose-inhibited division protein A [Stappia aggregata IAM 12614] gi|118438463|gb|EAV45097.1| glucose-inhibited division protein A [Stappia aggregata IAM 12614] Length = 472 Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 51/109 (46%), Gaps = 2/109 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q R IPGLE R G ++N PK L TL K L AG Sbjct: 288 GFQTKLKYGAQADIFRMIPGLENAQFARLGGLHRNTFLNSPKVLDGTLRLKADPRLRFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 QI G GY E+A+ G +AG+ + ++ D + T + +G ++ +T Sbjct: 348 QITGCEGYVESASVGCLAGLFAVLEARGQDIVPPPAT-TAMGALLGHIT 395 >gi|291286770|ref|YP_003503586.1| gid protein [Denitrovibrio acetiphilus DSM 12809] gi|290883930|gb|ADD67630.1| gid protein [Denitrovibrio acetiphilus DSM 12809] Length = 431 Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust. Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 1/78 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q + R IPGLE +R G YI+ P L T +T L+ AG Sbjct: 278 GCQTKMKIPEQKRVFRLIPGLENAEFLRFGSIHRNTYIHSPGNLKRTFQTTADKDLYFAG 337 Query: 368 QINGTTGYEEAAAQGLVA 385 QI G GY E+AA G++A Sbjct: 338 QITGVEGYLESAASGILA 355 >gi|237744890|ref|ZP_04575371.1| tRNA (uracil-5-)-methyltransferase Gid [Fusobacterium sp. 7_1] gi|229432119|gb|EEO42331.1| tRNA (uracil-5-)-methyltransferase Gid [Fusobacterium sp. 7_1] Length = 434 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 38/112 (33%), Positives = 51/112 (45%), Gaps = 4/112 (3%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF-PTLETKKISGLFLAG 367 G T L Q + IPGLE IR G +IN +L TL K ++ AG Sbjct: 279 GFQTNLKFGEQKRVFSMIPGLENAEFIRYGVMHRNTFINSTKLLDKTLRLKNRDNIYFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSA-RKSNKLDCICFSRTDSYIGVMIDDLTSK 418 QI G GY A A G+ +N A R NK + I S IG +++ +T + Sbjct: 339 QITGGEGYVTAIATGMYVAMNVANRLENKEEFIL--EDISEIGAIVNYITEE 388 >gi|239904852|ref|YP_002951590.1| Gid protein [Desulfovibrio magneticus RS-1] gi|239794715|dbj|BAH73704.1| Gid protein [Desulfovibrio magneticus RS-1] Length = 437 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 73/181 (40%), Gaps = 18/181 (9%) Query: 269 SYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPG 328 ++GP + D R G + L PE + + G T L Q + R IP Sbjct: 244 TFGPMKPVGLTDP--RTGRWPYAVVQLRPENVARSTMNLVGFQTKLVYGEQERVFRMIPA 301 Query: 329 LEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGI 387 L R G ++N PK L LE G++LAGQI G GY E+AA GL G Sbjct: 302 LHAAEFTRLGSIHRNTFVNAPKVLNERLELVARPGVYLAGQITGVEGYVESAACGLWLGT 361 Query: 388 NSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLT 447 + + + + + +G +++ L + P + F +P N + LT Sbjct: 362 QLGARLARGEELPPPPVVTALGALLNHLRT-----PAKKF----------QPSNVNFGLT 406 Query: 448 P 448 P Sbjct: 407 P 407 >gi|254293779|ref|YP_003059802.1| tRNA (uracil-5-)-methyltransferase Gid [Hirschia baltica ATCC 49814] gi|254042310|gb|ACT59105.1| gid protein [Hirschia baltica ATCC 49814] Length = 473 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 31/79 (39%), Positives = 40/79 (50%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q +R IPGLE R G +IN PK L L+ K + AG Sbjct: 301 GFQTKMTYGAQKDVLRMIPGLENAEFARLGGIHRNTFINSPKVLNNKLQLKNQLRIRFAG 360 Query: 368 QINGTTGYEEAAAQGLVAG 386 Q++G GY E+AA GL+AG Sbjct: 361 QVSGVEGYVESAAMGLLAG 379 >gi|302341709|ref|YP_003806238.1| gid protein [Desulfarculus baarsii DSM 2075] gi|301638322|gb|ADK83644.1| gid protein [Desulfarculus baarsii DSM 2075] Length = 463 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L + Q + R IP L R G +++ P+ L + + +F+AG Sbjct: 296 GFQTKLTHQSQLRVFRLIPALAHAEFARLGSIHRNSFVDAPRVLDAFMRLRTAPNVFVAG 355 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+ A GL+ G+N+AR Sbjct: 356 QLAGVEGYVESMAAGLLCGLNAAR 379 >gi|153005551|ref|YP_001379876.1| tRNA (uracil-5-)-methyltransferase Gid [Anaeromyxobacter sp. Fw109-5] gi|205830306|sp|A7HDU6|TRMFO_ANADF RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|152029124|gb|ABS26892.1| gid protein [Anaeromyxobacter sp. Fw109-5] Length = 451 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 39/122 (31%), Positives = 55/122 (45%), Gaps = 4/122 (3%) Query: 266 DIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRT 325 D+ +YGP +ED R G R + L E + G T L Q + +R Sbjct: 240 DVLAYGPMKPVGLEDP--RTGRRPFAVVQLRREDVAGTAYNLVGFQTRLTWTEQRRILRE 297 Query: 326 -IPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGL 383 +PGL +R G ++ P+ L P L ++ LF AGQI G GY E+AA G Sbjct: 298 YVPGLAGAEFVRLGQIHRNTFLEAPRVLAPDLSARERPHLFFAGQITGVEGYVESAACGH 357 Query: 384 VA 385 +A Sbjct: 358 LA 359 >gi|163736318|ref|ZP_02143737.1| gid protein [Phaeobacter gallaeciensis BS107] gi|161390188|gb|EDQ14538.1| gid protein [Phaeobacter gallaeciensis BS107] Length = 447 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 2/109 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q + +R IPGLE + R G ++N P L + K + AG Sbjct: 286 GFQTKMKYGAQTEVLRMIPGLENASFARLGGIHRNTFLNSPTLLDNQMRLKSRPNIRFAG 345 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 QI G GY E+AA GL+AG +A + D + DS +G +I +T Sbjct: 346 QITGVEGYVESAAMGLLAGRMAAAEILGRDLPEVPQ-DSAMGALIHHIT 393 >gi|34763135|ref|ZP_00144104.1| Glucose inhibited division protein A [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27887198|gb|EAA24300.1| Glucose inhibited division protein A [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 140 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 35/95 (36%), Positives = 47/95 (49%), Gaps = 4/95 (4%) Query: 326 IPGLEKVNIIRPGYAIEYDYINPKELF-PTLETKKISGLFLAGQINGTTGYEEAAAQGLV 384 IPGLE IR G +IN +L TL K ++ AGQI G GY A A G+ Sbjct: 2 IPGLENAEFIRYGVMHRNTFINSTKLLDKTLRLKNKDNIYFAGQITGGEGYVTAIATGMY 61 Query: 385 AGINSA-RKSNKLDCICFSRTDSYIGVMIDDLTSK 418 A +N A R NK + I S IG +++ +T + Sbjct: 62 AAMNIANRLENKKEFIL--EDISEIGAIVNYITEE 94 >gi|75675956|ref|YP_318377.1| tRNA (uracil-5-)-methyltransferase Gid [Nitrobacter winogradskyi Nb-255] gi|123613322|sp|Q3SRR6|TRMFO_NITWN RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|74420826|gb|ABA05025.1| Gid protein [Nitrobacter winogradskyi Nb-255] Length = 477 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 32/83 (38%), Positives = 41/83 (49%), Gaps = 1/83 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + RTIPGLE R G ++N PK L L + L AG Sbjct: 295 GFQTKLKHGAQTRIFRTIPGLEGAEFARLGGLHRNTFLNSPKLLDVRLRLRAEPRLRFAG 354 Query: 368 QINGTTGYEEAAAQGLVAGINSA 390 Q+ G GY E+AA GL+ G+ +A Sbjct: 355 QMTGCEGYVESAAIGLLGGLYAA 377 >gi|166364902|ref|YP_001657175.1| tRNA (uracil-5-)-methyltransferase Gid [Microcystis aeruginosa NIES-843] gi|189040807|sp|B0JFX8|TRMFO_MICAN RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|166087275|dbj|BAG01983.1| glucose inhibited division protein [Microcystis aeruginosa NIES-843] Length = 445 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 40/110 (36%), Positives = 59/110 (53%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLEK +R G + +IN P+ L +L+ K L AG Sbjct: 283 GFQTNLKWGEQTRVFRLIPGLEKAEFVRMGVMHKNTFINSPQLLSSSLQFKSRPTLLAAG 342 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ GT GY AAA G +AG N+AR + L+ + T + +G + + ++S Sbjct: 343 QLIGTEGYTAAAAGGWLAGTNAARLALGLETVTLP-TTTMMGSLFEFISS 391 >gi|159030189|emb|CAO91081.1| gid [Microcystis aeruginosa PCC 7806] Length = 445 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 40/110 (36%), Positives = 59/110 (53%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLEK +R G + +IN P+ L +L+ K L AG Sbjct: 283 GFQTNLKWGEQTRVFRLIPGLEKAEFVRMGVMHKNTFINSPQLLSSSLQFKSRPTLLAAG 342 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ GT GY AAA G +AG N+AR + L+ + T + +G + + ++S Sbjct: 343 QLIGTEGYTAAAAGGWLAGTNAARLALGLETVTLP-TTTMMGSLFEFISS 391 >gi|86159119|ref|YP_465904.1| tRNA (uracil-5-)-methyltransferase Gid [Anaeromyxobacter dehalogenans 2CP-C] gi|123736735|sp|Q2ILE0|TRMFO_ANADE RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|85775630|gb|ABC82467.1| gid protein [Anaeromyxobacter dehalogenans 2CP-C] Length = 450 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 2/79 (2%) Query: 309 GISTALPEEIQHQFIRT-IPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLA 366 G T L Q + R +PGL +R G +++ P+ L P L + LFLA Sbjct: 281 GFQTRLTWPEQRRIFRAFLPGLANAEFVRLGQIHRNTFVDAPRVLAPDLSVRAAPHLFLA 340 Query: 367 GQINGTTGYEEAAAQGLVA 385 GQI G GY E+AA GL+A Sbjct: 341 GQITGVEGYVESAACGLMA 359 >gi|328955477|ref|YP_004372810.1| gid protein [Coriobacterium glomerans PW2] gi|328455801|gb|AEB06995.1| gid protein [Coriobacterium glomerans PW2] Length = 443 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 10/91 (10%) Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 G T++ +P Q + R +PGL R G +++ + + Sbjct: 279 GFQTNLTFPE----------QKRVFRMVPGLGHAEFFRMGVMHRNTFVDAPHVLDSSFAV 328 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINS 389 + + LAGQI GT GY EA A GL+AG+N+ Sbjct: 329 PETQVRLAGQITGTEGYTEAIASGLLAGLNT 359 >gi|139439758|ref|ZP_01773149.1| Hypothetical protein COLAER_02180 [Collinsella aerofaciens ATCC 25986] gi|133774908|gb|EBA38728.1| Hypothetical protein COLAER_02180 [Collinsella aerofaciens ATCC 25986] Length = 445 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 45/106 (42%) Query: 284 RFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEY 343 R G R I L E G T L Q + +PGLE R G Sbjct: 255 RTGRRPWAAIQLRAENKEKTAYNLVGFQTNLTFGEQKRVFHMVPGLENAEFFRYGVMHRN 314 Query: 344 DYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINS 389 +++ + + +G+ LAGQI GT GY EA A GL+A +N+ Sbjct: 315 TFVDAPHVLDSTFAVPGTGVRLAGQITGTEGYMEAVATGLLAALNT 360 >gi|253583756|ref|ZP_04860954.1| tRNA (uracil-5-)-methyltransferase Gid [Fusobacterium varium ATCC 27725] gi|251834328|gb|EES62891.1| tRNA (uracil-5-)-methyltransferase Gid [Fusobacterium varium ATCC 27725] Length = 437 Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 25/143 (17%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGG--- 52 S +VI++G G AGCEAA AK G L HK + C+ ++GG Sbjct: 3 SKEVIIVGAGLAGCEAAYQLAKRGIKVKLYEMKAKKMTEAHKKDYFAELVCSNSLGGDNL 62 Query: 53 -LGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREI 111 G + E+ LD L+ ++AD + PA G DR+ + + + + Sbjct: 63 ANASGLMKEELRKLDSLLIKIADKNRV----------PA--GQALAVDRDGFSVEVTEYL 110 Query: 112 LSQENLDVIQGEVAGFNTEKNII 134 + EN+++I E +K I+ Sbjct: 111 RNMENIEIIDEEFTEIPEDKIIL 133 Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 1/85 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF-PTLETKKISGLFLAG 367 G T L Q + IPGLE +R G +I+ +L TL+ K ++ AG Sbjct: 280 GFQTNLKWGEQKRVFSMIPGLENAEFVRYGVMHRNTFIDSSKLLDETLKLKASDNIYFAG 339 Query: 368 QINGTTGYEEAAAQGLVAGINSARK 392 QI G+ GY + + G +A IN A + Sbjct: 340 QITGSEGYVSSISTGAMAAINIAHR 364 >gi|114707239|ref|ZP_01440137.1| glucose-inhibited division protein A [Fulvimarina pelagi HTCC2506] gi|114537435|gb|EAU40561.1| glucose-inhibited division protein A [Fulvimarina pelagi HTCC2506] Length = 473 Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust. Identities = 32/79 (40%), Positives = 40/79 (50%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q R IPGL+ R G Y++ P+ L TL K ++ L AG Sbjct: 289 GFQTKLRYGEQAAIFRMIPGLQNAEFARLGGLHRNTYLDSPRLLDATLRLKSLNRLRFAG 348 Query: 368 QINGTTGYEEAAAQGLVAG 386 QI G GY E+AA GL+AG Sbjct: 349 QITGCEGYVESAAVGLMAG 367 >gi|148553800|ref|YP_001261382.1| tRNA (uracil-5-)-methyltransferase Gid [Sphingomonas wittichii RW1] gi|166989567|sp|A5V4M8|TRMFO_SPHWW RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|148498990|gb|ABQ67244.1| gid protein [Sphingomonas wittichii RW1] Length = 445 Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust. Identities = 33/79 (41%), Positives = 39/79 (49%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + RTIPGL K R G +I +PK L L K + AG Sbjct: 281 GFQTKLKHAEQVRLFRTIPGLGKAEFARLGGLHRNTFIQSPKLLDGALRLKSRPNIRFAG 340 Query: 368 QINGTTGYEEAAAQGLVAG 386 QI G GY E+AA GL+AG Sbjct: 341 QITGCEGYVESAAIGLLAG 359 >gi|209885371|ref|YP_002289228.1| tRNA:M(5)U-54 methyltransferase [Oligotropha carboxidovorans OM5] gi|209873567|gb|ACI93363.1| tRNA:M(5)U-54 methyltransferase [Oligotropha carboxidovorans OM5] Length = 477 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 32/83 (38%), Positives = 41/83 (49%), Gaps = 1/83 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q Q +R IPGLE R G ++N PK L L + L AG Sbjct: 295 GFQTKLKYGAQTQVLRMIPGLEHAEFARLGGLHRNTFLNSPKLLDAQLRLRAEPRLRFAG 354 Query: 368 QINGTTGYEEAAAQGLVAGINSA 390 Q+ G GY E+A GL+AG+ +A Sbjct: 355 QMTGCEGYVESAGIGLLAGLFAA 377 >gi|154500971|ref|ZP_02039009.1| hypothetical protein BACCAP_04657 [Bacteroides capillosus ATCC 29799] gi|150269995|gb|EDM97514.1| hypothetical protein BACCAP_04657 [Bacteroides capillosus ATCC 29799] Length = 434 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 89/411 (21%), Positives = 150/411 (36%), Gaps = 55/411 (13%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTAL---------ITHKTSTIGSMSCNPAIGGL----G 54 VIVIG G AG EAA A+ G L H T G + C+ ++ Sbjct: 4 VIVIGAGLAGSEAAWQLAQRGIPVELREMKPEKMTPAHHTPWFGELVCSNSLRSDQLENA 63 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L E+ + L+ AD ++ G DR + A+ +I S Sbjct: 64 VGLLKEELRRMGSLILSCADEHRVE------------AGGALAVDRHGFAQAITEKIRSH 111 Query: 115 ENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRM 174 + V++GEV E +I + + + T+ F ++ A Sbjct: 112 PLITVVEGEVEHLPAEGQVIVA-----SGPLTSDTLAEDIKGFFPESHYLNFFDAAA--- 163 Query: 175 GDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT 234 P + + M+ F R GTP ++ T +++ +F T+ Sbjct: 164 ---PLVTFESVDMESAFFASRYDKGTPDYINCPL-----TAEEYE-------AFWTELCA 208 Query: 235 NRQIEC-GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQI 293 ++ E G N+ + +E + A D YGP ++D + G+ + Sbjct: 209 AQEAEVHGFEDKNVFEGCMPVEVM---ARRGHDTLCYGPLKPRGLKDP--KTGKEPFAVV 263 Query: 294 FLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELF 352 L + + + G T L Q + IP L+ +R G Y++ P+ L Sbjct: 264 QLRKDNADGTIYNLVGFQTHLKWPEQKRVFSMIPALKNAEFLRYGVMHRNTYLDSPRLLD 323 Query: 353 PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSR 403 KK + AGQI G GY E+ A G +A + +R+ L + F + Sbjct: 324 RYYRVKKDPRICFAGQITGVEGYVESTASGFLAALELSRRLRGLPPVDFPQ 374 >gi|260433647|ref|ZP_05787618.1| tRNA:M(5)U-54 methyltransferase [Silicibacter lacuscaerulensis ITI-1157] gi|260417475|gb|EEX10734.1| tRNA:M(5)U-54 methyltransferase [Silicibacter lacuscaerulensis ITI-1157] Length = 455 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 6/111 (5%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q + R IPGLE + R G +IN P L + K + AG Sbjct: 286 GFQTKMKYGAQTEVFRMIPGLENASFARLGGIHRNTFINSPTLLDAQMRLKSRPNIRFAG 345 Query: 368 QINGTTGYEEAAAQGLVAGINSARK--SNKLDCICFSRTDSYIGVMIDDLT 416 QI G GY E+AA GL+AG +A + + L + DS +G +I +T Sbjct: 346 QITGVEGYVESAAMGLLAGRLAAAEILGHSLPPVP---QDSAMGALIHHIT 393 >gi|114570442|ref|YP_757122.1| tRNA (uracil-5-)-methyltransferase Gid [Maricaulis maris MCS10] gi|122315720|sp|Q0ANF3|TRMFO_MARMM RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|114340904|gb|ABI66184.1| gid protein [Maricaulis maris MCS10] Length = 466 Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust. Identities = 32/83 (38%), Positives = 42/83 (50%), Gaps = 1/83 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q + +R IPGLE+ R G ++N PK L L K L AG Sbjct: 296 GFQTKMKYGAQGEVLRMIPGLEEARFARLGGIHRNTFLNSPKLLDAQLRLKSQPRLRFAG 355 Query: 368 QINGTTGYEEAAAQGLVAGINSA 390 Q+ G GY E+AA GL+AG +A Sbjct: 356 QLIGVEGYVESAAMGLLAGRYAA 378 >gi|221194483|ref|ZP_03567540.1| tRNA:M(5)U-54 methyltransferase [Atopobium rimae ATCC 49626] gi|221185387|gb|EEE17777.1| tRNA:M(5)U-54 methyltransferase [Atopobium rimae ATCC 49626] Length = 449 Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 52/122 (42%), Gaps = 2/122 (1%) Query: 284 RFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEY 343 R G R + L E + G T L Q + IPGL + +R G Sbjct: 254 RDGRRPWAAVQLRAENADATAYNLVGFQTNLVWGEQRRVFSMIPGLGEAEFLRYGVMHRN 313 Query: 344 DYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFS 402 +++ P L P+ + + LAGQ+ GT GY EA A GL+A +N+ IC Sbjct: 314 SFVDAPHALTPSFAIPH-THIRLAGQLTGTEGYVEAIASGLLAALNTYADLIAAPEICLP 372 Query: 403 RT 404 +T Sbjct: 373 KT 374 >gi|83942331|ref|ZP_00954792.1| glucose-inhibited division protein A [Sulfitobacter sp. EE-36] gi|83846424|gb|EAP84300.1| glucose-inhibited division protein A [Sulfitobacter sp. EE-36] Length = 450 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q + +R IPGLE + R G ++N P L + + S + AG Sbjct: 286 GFQTKMKYGAQTEVLRMIPGLENASFARLGGIHRNTFLNSPTLLDDQMRLRSQSNVRFAG 345 Query: 368 QINGTTGYEEAAAQGLVAG 386 QI G GY E+AA GL+AG Sbjct: 346 QITGVEGYVESAAMGLLAG 364 >gi|159184867|ref|NP_354655.2| tRNA (uracil-5-)-methyltransferase Gid [Agrobacterium tumefaciens str. C58] gi|26006764|sp|Q8UET6|TRMFO_AGRT5 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|159140148|gb|AAK87440.2| glucose inhibited division protein [Agrobacterium tumefaciens str. C58] Length = 481 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 32/79 (40%), Positives = 38/79 (48%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L +Q R IPGLE R G YI+ P L +L K L AG Sbjct: 292 GFQTKLKYSVQADVFRMIPGLENAEFARLGGLHRNTYIDSPILLDRSLRLKSRPDLRFAG 351 Query: 368 QINGTTGYEEAAAQGLVAG 386 QI G GY E+A+ GL+AG Sbjct: 352 QITGCEGYVESASVGLLAG 370 >gi|213612576|ref|ZP_03370402.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 45 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 23/39 (58%), Positives = 29/39 (74%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSM 44 +DVI+IGGGHAG EAA AA++G T L+TH T+G M Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQM 45 >gi|170078989|ref|YP_001735627.1| tRNA (uracil-5-)-methyltransferase Gid [Synechococcus sp. PCC 7002] gi|205830341|sp|B1XK17|TRMFO_SYNP2 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|169886658|gb|ACB00372.1| glucose inhibited division protein A [Synechococcus sp. PCC 7002] Length = 456 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 40/110 (36%), Positives = 55/110 (50%), Gaps = 2/110 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF-PTLETKKISGLFLAG 367 G T L Q + R IPGLE +R G ++N EL TL+ KK L AG Sbjct: 293 GFQTNLRWGEQKRVFRMIPGLENAEFVRMGVMHRNTFLNSPELLEATLQFKKRPTLLAAG 352 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 Q+ GT GY AAA G +AG N+AR + L + T + +G + + + S Sbjct: 353 QLIGTEGYTAAAAGGWLAGTNAARLAQGLTPLTLPET-TMMGALFEFIHS 401 >gi|299134925|ref|ZP_07028116.1| gid protein [Afipia sp. 1NLS2] gi|298589902|gb|EFI50106.1| gid protein [Afipia sp. 1NLS2] Length = 477 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 1/86 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q +R IPGLE+ R G ++N PK L L + L AG Sbjct: 295 GFQTKLKYGAQTNVLRMIPGLEQAEFARLGGLHRNTFLNSPKLLDARLRLRAQPRLRFAG 354 Query: 368 QINGTTGYEEAAAQGLVAGINSARKS 393 Q+ G GY E+A GL+AG+ +A ++ Sbjct: 355 QMTGCEGYVESAGIGLLAGLFAAHEA 380 >gi|169839419|ref|ZP_02872607.1| glucose-inhibited division protein A [candidate division TM7 single-cell isolate TM7a] Length = 37 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 18/33 (54%), Positives = 25/33 (75%) Query: 271 GPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 GPR+CPS++ KI+ F E+ HQIFLE E + +D Sbjct: 3 GPRHCPSLDRKIMNFPEKTNHQIFLEQESVESD 35 >gi|327398970|ref|YP_004339839.1| methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO [Hippea maritima DSM 10411] gi|327181599|gb|AEA33780.1| Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO [Hippea maritima DSM 10411] Length = 436 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 52/132 (39%), Gaps = 11/132 (8%) Query: 265 GDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIR 324 G +K G +Y +V+ + N L G T + YP Q + R Sbjct: 244 GPLKPVGLKYEGKQPFAVVQLRKENKEGTLLSMVGFQTKLTYPE----------QKRVFR 293 Query: 325 TIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGL 383 IP L + G +I+ P L L+ K +F AGQI G GY +A G+ Sbjct: 294 LIPALRNAEFAKLGSLHRNTFIDSPHLLNEFLQLKSGENIFFAGQITGVEGYMASAVSGI 353 Query: 384 VAGINSARKSNK 395 G+N A K K Sbjct: 354 YVGMNIALKIKK 365 >gi|255263279|ref|ZP_05342621.1| tRNA:M(5)U-54 methyltransferase [Thalassiobium sp. R2A62] gi|255105614|gb|EET48288.1| tRNA:M(5)U-54 methyltransferase [Thalassiobium sp. R2A62] Length = 446 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 91/394 (23%), Positives = 144/394 (36%), Gaps = 55/394 (13%) Query: 10 VIGGGHAGCEAAAVAAKLGASTAL---------ITHKTSTIGSMSCNPAIGGLGKGHLVR 60 +IGGG AG EAA AA G + + H+T +G M C+ + Sbjct: 7 IIGGGMAGSEAAWQAANAGLNVVIHEMRPKVETFAHQTGDLGEMVCSNSFRSDDD----- 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E +A+ L + A G+ + K PA G DRE + ++ + S N+ V Sbjct: 62 EQNAVGLLHWEMRAAGGLIMATADKHKLPA--GGALAVDREPFAQSVTAALKSHPNISVS 119 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSP-- 178 E+ T+ + I +T LT+G + + A +P Sbjct: 120 YEEITELPTDGHWI------------IATGPLTSGNLADAIANETGKDALAFFDAIAPII 167 Query: 179 ---SNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN 235 S + ++M+ +D G + A L+ T Q+ E I +DK Sbjct: 168 YFDSIDMSQAWMQSRYDKGETEEERTAYLNCPM-----TRDQY--EAFIDALLASDKTEF 220 Query: 236 RQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDK---IVRFGERNGHQ 292 ++ E ++ E + + + G +K G E+K +V+ N Sbjct: 221 KEGETAGYFDGCLPIEVMAERGRETLRF-GPMKPVGLTNANDPENKPYAVVQLRRDNALG 279 Query: 293 IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKEL 351 G T + Y Q +R IPGL+ R G ++N P L Sbjct: 280 TLYNIVGFQTKMKY----------GAQTDVLRMIPGLQDAQFARLGGIHRNTFLNSPTLL 329 Query: 352 FPTLETKKISGLFLAGQINGTTGYEEAAAQGLVA 385 + K L AGQI G GY E+AA GL+A Sbjct: 330 DGQMRLKSKPHLRFAGQITGVEGYVESAAMGLLA 363 >gi|307946889|ref|ZP_07662224.1| tRNA:M(5)U-54 methyltransferase [Roseibium sp. TrichSKD4] gi|307770553|gb|EFO29779.1| tRNA:M(5)U-54 methyltransferase [Roseibium sp. TrichSKD4] Length = 470 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 33/83 (39%), Positives = 40/83 (48%), Gaps = 1/83 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q R IPGLE R G ++N PK L TL+ K L AG Sbjct: 288 GFQTKLRYGAQADIFRMIPGLEDAQFARLGGLHRNTFLNSPKVLDETLKLKAEPRLRFAG 347 Query: 368 QINGTTGYEEAAAQGLVAGINSA 390 QI G GY E+A+ G + GI +A Sbjct: 348 QITGCEGYVESASVGCMTGIFAA 370 >gi|312114355|ref|YP_004011951.1| gid protein [Rhodomicrobium vannielii ATCC 17100] gi|311219484|gb|ADP70852.1| gid protein [Rhodomicrobium vannielii ATCC 17100] Length = 469 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 2/109 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE R G ++N PK L L K + AG Sbjct: 289 GFQTKLKHGEQSRVFRMIPGLENAVFARLGGLHRNTFLNSPKVLDGALRLKAAPHVRFAG 348 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 Q+ G GY E+AA GL+AG +A + D + +T + +G ++ +T Sbjct: 349 QVTGVEGYVESAAIGLLAGRFAAAELVGRDPLPPPQT-TALGALLTHIT 396 >gi|308234476|ref|ZP_07665213.1| gid protein [Atopobium vaginae DSM 15829] gi|328944069|ref|ZP_08241534.1| tRNA:M(5)U-54 methyltransferase [Atopobium vaginae DSM 15829] gi|327492038|gb|EGF23812.1| tRNA:M(5)U-54 methyltransferase [Atopobium vaginae DSM 15829] Length = 474 Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 38/81 (46%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQ 368 G T L Q + R IPGLE+ R G +++ + T + + L GQ Sbjct: 299 GFQTNLLWGEQKRVFRMIPGLEEAEFFRYGVMHRNSFVDAPKCLDTTFKIPHTKIRLTGQ 358 Query: 369 INGTTGYEEAAAQGLVAGINS 389 I GT GY EA A GL A +N+ Sbjct: 359 ITGTEGYTEAIASGLFAALNT 379 >gi|295103250|emb|CBL00794.1| tRNA:m(5)U-54 methyltransferase [Faecalibacterium prausnitzii SL3/3] Length = 458 Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust. Identities = 90/422 (21%), Positives = 146/422 (34%), Gaps = 85/422 (20%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGLGKG 56 Y V ++G G AGCEAA A G L HK+ + C+ ++ Sbjct: 4 YKVTILGAGLAGCEAALWLAGKGVQVELYEQKPVHFSPAHKSEGFAELICSNSLK----- 58 Query: 57 HLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQEN 116 +D+ GL+ G + + ++ G DR+ + A+ R + EN Sbjct: 59 --AERLDSASGLLKEEMRRMGSRL-LTAAEETRVAAGGALAVDRDAFSAAVTRMVEQCEN 115 Query: 117 LDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVI--HIGKLKIPAGRM 174 + V + +V ++ + +++ TG G + IG+L Sbjct: 116 ITVHREQV-----------------ETIDESAPILVATGPLTDGALADEIGRLT------ 152 Query: 175 GDSPSNSLFNSFMKFDFDTGRLKTGTPARLD-GKTIIWDKTEKQFADERLIPFS------ 227 GD + F T LD GK + ++ AD PF+ Sbjct: 153 GDE----------RLHFYDAVAPIVTAESLDYGKVFAASRYDRGEADYLNCPFNKAEYEA 202 Query: 228 -----FMTDKITNRQIECGI---TRTNLETHRIIMENIKHSAIYSG------------DI 267 ++ + G T+ + + H + + +Y G D Sbjct: 203 FHAALASAERAPLHDFDTGAEQSTKPDPDAHGKKADTVT---VYEGCMPIEIMAARGADT 259 Query: 268 KSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIP 327 +GP + D G R + L E + G T L Q + IP Sbjct: 260 MRFGPLRPVGLVDPNT--GHRPWANVQLRAENKERTLYNIVGFQTNLKWGEQKRVFSMIP 317 Query: 328 GLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAG 386 GLE +R G +++ P+ L L K +F AGQI G GY E+AA GL+A Sbjct: 318 GLENAEFVRYGVMHRNTFLDAPRVLSAQLCLKTHPNVFFAGQITGFEGYMESAACGLLAA 377 Query: 387 IN 388 N Sbjct: 378 RN 379 >gi|254510197|ref|ZP_05122264.1| tRNA:m(5)U-54 methyltransferase [Rhodobacteraceae bacterium KLH11] gi|221533908|gb|EEE36896.1| tRNA:m(5)U-54 methyltransferase [Rhodobacteraceae bacterium KLH11] Length = 456 Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust. Identities = 38/115 (33%), Positives = 50/115 (43%), Gaps = 14/115 (12%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q R IPGLE + R G +IN P L + K + AG Sbjct: 296 GFQTKMKYGAQTDVFRMIPGLENASFARLGGIHRNTFINSPTLLDSQMRLKSQPNIRFAG 355 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRT------DSYIGVMIDDLT 416 QI G GY E+AA GL+AG +A + RT DS +G +I +T Sbjct: 356 QITGVEGYVESAAMGLLAGRLAAAQ-------LLGRTLPDVPQDSAMGALIHHIT 403 >gi|254477480|ref|ZP_05090866.1| tRNA:m(5)U-54 methyltransferase [Ruegeria sp. R11] gi|214031723|gb|EEB72558.1| tRNA:m(5)U-54 methyltransferase [Ruegeria sp. R11] Length = 451 Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust. Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 4/110 (3%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q + +R IPGLE + R G ++N P L + K + AG Sbjct: 290 GFQTKMKYGAQTEVLRMIPGLENASFARLGGIHRNTFLNSPTLLDSEMRLKSKPHIRFAG 349 Query: 368 QINGTTGYEEAAAQGLVAG-INSARKSNKLDCICFSRTDSYIGVMIDDLT 416 QI G GY E+AA GL+AG + +A K + DS +G +I +T Sbjct: 350 QITGVEGYVESAAMGLLAGRLAAAEILGK--TLPVVPQDSAMGALIHHIT 397 >gi|254465537|ref|ZP_05078948.1| tRNA:m(5)U-54 methyltransferase [Rhodobacterales bacterium Y4I] gi|206686445|gb|EDZ46927.1| tRNA:m(5)U-54 methyltransferase [Rhodobacterales bacterium Y4I] Length = 479 Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust. Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 6/111 (5%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q + R IPGLE + R G +IN P L + K + AG Sbjct: 318 GFQTKMKYGAQTEVFRMIPGLENASFARLGGIHRNTFINSPTLLDAQMRLKSKPNIRFAG 377 Query: 368 QINGTTGYEEAAAQGLVAGINSARK--SNKLDCICFSRTDSYIGVMIDDLT 416 QI G GY E+AA GL+AG +A + +L + DS +G +I +T Sbjct: 378 QITGVEGYVESAAMGLLAGRLAAAEILGRELPEVP---QDSAMGALIHHIT 425 >gi|217979041|ref|YP_002363188.1| tRNA (uracil-5-)-methyltransferase Gid [Methylocella silvestris BL2] gi|217504417|gb|ACK51826.1| gid protein [Methylocella silvestris BL2] Length = 471 Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust. Identities = 36/111 (32%), Positives = 51/111 (45%), Gaps = 4/111 (3%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q R IPGLE+ R G ++N PK L + L AG Sbjct: 291 GFQTKLKHGAQIAVFRAIPGLERAEFARLGGLHRNTFLNSPKVLDSAFRLRAQPRLRFAG 350 Query: 368 QINGTTGYEEAAAQGLVAG-INSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 QI G GY E+AA GLV G + +A +S + + +G +I+ +T+ Sbjct: 351 QITGCEGYVESAAIGLVVGRMAAADRSG--EAFLPPPATTALGALINHITA 399 >gi|257440566|ref|ZP_05616321.1| tRNA:M(5)U-54 methyltransferase [Faecalibacterium prausnitzii A2-165] gi|257196889|gb|EEU95173.1| tRNA:M(5)U-54 methyltransferase [Faecalibacterium prausnitzii A2-165] Length = 458 Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust. Identities = 45/165 (27%), Positives = 71/165 (43%), Gaps = 11/165 (6%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE +R G +++ P+ L L K+ +F AG Sbjct: 299 GFQTNLKWGEQKRVFSMIPGLENAEFVRYGVMHRNTFLDAPRVLDAGLFLKEHPNVFFAG 358 Query: 368 QINGTTGYEEAAAQGLVAG--INSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 QI G GY E+AA GL+A I + + +L D+ G +I LT++ + Sbjct: 359 QITGFEGYMESAACGLLAARSIYARLEGRQLPP---PPVDTMCGALIQYLTTEN-----K 410 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQE 470 F L P A++R ++ + ER F +++ E Sbjct: 411 HFQPMGANMGILPPLPAESRPRDKRLRYMAVAERAVASFQQWLNE 455 >gi|126726442|ref|ZP_01742283.1| glucose-inhibited division protein A [Rhodobacterales bacterium HTCC2150] gi|126704305|gb|EBA03397.1| glucose-inhibited division protein A [Rhodobacterales bacterium HTCC2150] Length = 461 Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust. Identities = 34/93 (36%), Positives = 43/93 (46%), Gaps = 3/93 (3%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q +R IPGLE R G ++N P L + K L AG Sbjct: 301 GFQTKMKYGAQTDVLRQIPGLEGAKFARLGGIHRNTFLNSPTLLDDQMRMKSKPNLRFAG 360 Query: 368 QINGTTGYEEAAAQGLVAGINSARK--SNKLDC 398 QI G GY E+AA GL+AG +A + KLD Sbjct: 361 QITGVEGYVESAAMGLLAGRMAAAEILGGKLDT 393 >gi|160945999|ref|ZP_02093225.1| hypothetical protein FAEPRAM212_03532 [Faecalibacterium prausnitzii M21/2] gi|158443730|gb|EDP20735.1| hypothetical protein FAEPRAM212_03532 [Faecalibacterium prausnitzii M21/2] Length = 458 Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust. Identities = 90/422 (21%), Positives = 146/422 (34%), Gaps = 85/422 (20%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGLGKG 56 Y V ++G G AGCEAA A G L HK+ + C+ ++ Sbjct: 4 YKVTILGAGLAGCEAALWLAGKGVQIELYEQKPVHFSPAHKSEGFAELICSNSLK----- 58 Query: 57 HLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQEN 116 +D+ GL+ G + + ++ G DR+ + A+ R + EN Sbjct: 59 --AERLDSASGLLKEEMRRMGSRL-LTAAEETRVAAGGALAVDRDAFSAAVTRMVEQCEN 115 Query: 117 LDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVI--HIGKLKIPAGRM 174 + V + +V ++ + +++ TG G + IG+L Sbjct: 116 ITVHREQV-----------------ETIDESAPILVATGPLTDGALADEIGRLT------ 152 Query: 175 GDSPSNSLFNSFMKFDFDTGRLKTGTPARLD-GKTIIWDKTEKQFADERLIPFS------ 227 GD + F T LD GK + ++ AD PF+ Sbjct: 153 GDE----------RLHFYDAVAPIVTAESLDYGKVFAASRYDRGEADYLNCPFNKAEYEA 202 Query: 228 -----FMTDKITNRQIECGI---TRTNLETHRIIMENIKHSAIYSG------------DI 267 ++ + G T+ + + H + + +Y G D Sbjct: 203 FHAALASAERAPLHDFDTGAEQSTKPDPDAHGKKADTVT---VYEGCMPIEIMAARGADT 259 Query: 268 KSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIP 327 +GP + D G R + L E + G T L Q + IP Sbjct: 260 MRFGPLRPVGLVDPNT--GHRPWANVQLRAENKERTLYNIVGFQTNLKWGEQKRVFSMIP 317 Query: 328 GLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAG 386 GLE +R G +++ P+ L L K +F AGQI G GY E+AA GL+A Sbjct: 318 GLENAEFVRYGVMHRNTFLDAPRVLSAQLCLKTHPNVFFAGQITGFEGYMESAACGLLAA 377 Query: 387 IN 388 N Sbjct: 378 RN 379 >gi|163793150|ref|ZP_02187126.1| glucose-inhibited division protein A [alpha proteobacterium BAL199] gi|159181796|gb|EDP66308.1| glucose-inhibited division protein A [alpha proteobacterium BAL199] Length = 463 Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust. Identities = 32/79 (40%), Positives = 40/79 (50%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q + RTIPGLE R G +IN P+ L +L K L AG Sbjct: 291 GFQTKMRHGEQVRVFRTIPGLENAEFARLGGLHRNTFINSPRLLDGSLRLKVEPRLRFAG 350 Query: 368 QINGTTGYEEAAAQGLVAG 386 QI G GY E++A GL+AG Sbjct: 351 QITGVEGYVESSAIGLLAG 369 >gi|257784506|ref|YP_003179723.1| gid protein [Atopobium parvulum DSM 20469] gi|257473013|gb|ACV51132.1| gid protein [Atopobium parvulum DSM 20469] Length = 444 Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 52/119 (43%), Gaps = 7/119 (5%) Query: 284 RFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEY 343 R G+R + L E G T L Q + IPGLE +R G Sbjct: 254 RTGKRPWAAVQLRAENTAKTAFNLVGFQTNLTWGEQKRVFTLIPGLENAEFVRYGVMHRN 313 Query: 344 DYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGIN-----SARKSNKL 396 +++ P L + S + LAGQI GT GY EA A GL+A +N S +K+ KL Sbjct: 314 SFVDSPHALDGSFGIPGTS-IILAGQITGTEGYVEAIASGLLAALNMYARLSGKKTFKL 371 >gi|225019247|ref|ZP_03708439.1| hypothetical protein CLOSTMETH_03200 [Clostridium methylpentosum DSM 5476] gi|224947878|gb|EEG29087.1| hypothetical protein CLOSTMETH_03200 [Clostridium methylpentosum DSM 5476] Length = 444 Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust. Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 2/113 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE +R G +++ P+ L +K + AG Sbjct: 280 GFQTNLKFGEQKRIFSMIPGLEHAEFVRYGVMHRNTFLDSPRLLDSHFRLRKEPRIRFAG 339 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 QI G GY E+AA G+ AG+ AR+ + + TDS +G + ++ + V Sbjct: 340 QITGVEGYIESAASGIYAGLTLARELSGQSELTLP-TDSMLGALSHYISDETV 391 >gi|22297993|ref|NP_681240.1| tRNA (uracil-5-)-methyltransferase Gid [Thermosynechococcus elongatus BP-1] gi|26006759|sp|P59109|TRMFO_THEEB RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|22294171|dbj|BAC08002.1| glucose inhibited division protein [Thermosynechococcus elongatus BP-1] Length = 457 Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust. Identities = 47/140 (33%), Positives = 63/140 (45%), Gaps = 3/140 (2%) Query: 266 DIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRT 325 D +GP + D R GER L E + + G T L Q + R Sbjct: 239 DTLRFGPLKPVGLRDP--RTGERPYAVAQLRQEDRHGQLWNLVGFQTNLRWGEQQRVFRM 296 Query: 326 IPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLV 384 IPGLE+ +R G ++N PK L +L+ + L AGQI GT GY AAA G + Sbjct: 297 IPGLEQAEFVRMGVMHRNTFLNAPKLLKASLQFRDRPTLLAAGQITGTEGYTAAAAGGWL 356 Query: 385 AGINSARKSNKLDCICFSRT 404 AG N+AR + L + T Sbjct: 357 AGTNAARLARGLAPLVLPPT 376 >gi|99081232|ref|YP_613386.1| tRNA (uracil-5-)-methyltransferase Gid [Ruegeria sp. TM1040] gi|99037512|gb|ABF64124.1| gid protein [Ruegeria sp. TM1040] Length = 450 Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust. Identities = 35/109 (32%), Positives = 49/109 (44%), Gaps = 2/109 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q R IPGLE R G ++N P L + K + AG Sbjct: 290 GFQTKMKYGAQTDVFRMIPGLENAKFARLGGIHRNTFLNSPTLLDHEMRLKSKPNIRFAG 349 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 Q+ G GY E+AA GL+AG +A + D + DS +G +I +T Sbjct: 350 QVTGVEGYVESAAMGLLAGRMAAAEILGKDLPQVPQ-DSAMGALIHHIT 397 >gi|254469783|ref|ZP_05083188.1| tRNA:m(5)U-54 methyltransferase [Pseudovibrio sp. JE062] gi|211961618|gb|EEA96813.1| tRNA:m(5)U-54 methyltransferase [Pseudovibrio sp. JE062] Length = 458 Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust. Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 2/109 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE R G ++N P+ L + K + + AG Sbjct: 283 GFQTKLKYGAQSEIFRMIPGLEDAQFARLGGLHRNTFLNSPRLLDEQMRLKALPHIRFAG 342 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 QI G GY E+ A G + G+ +A ++ D I + G +I+ +T Sbjct: 343 QITGCEGYVESTAVGCMTGLFAAHQALGTD-IAPPPATTACGAIINHIT 390 >gi|114778426|ref|ZP_01453271.1| glucose-inhibited division protein A [Mariprofundus ferrooxydans PV-1] gi|114551270|gb|EAU53828.1| glucose-inhibited division protein A [Mariprofundus ferrooxydans PV-1] Length = 448 Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust. Identities = 30/79 (37%), Positives = 39/79 (49%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T + Q + IPGLE+ R G +I +P L TL KK + AG Sbjct: 288 GFQTKMTYGEQKRVFTMIPGLEQAEFFRLGSLHRNTFIKSPALLDNTLRLKKEPRILFAG 347 Query: 368 QINGTTGYEEAAAQGLVAG 386 QI G GY E+A+ GL+AG Sbjct: 348 QITGVEGYVESASMGLMAG 366 >gi|205830475|sp|Q1GGU2|TRMFO_SILST RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase Length = 446 Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust. Identities = 35/109 (32%), Positives = 49/109 (44%), Gaps = 2/109 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q R IPGLE R G ++N P L + K + AG Sbjct: 286 GFQTKMKYGAQTDVFRMIPGLENAKFARLGGIHRNTFLNSPTLLDHEMRLKSKPNIRFAG 345 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 Q+ G GY E+AA GL+AG +A + D + DS +G +I +T Sbjct: 346 QVTGVEGYVESAAMGLLAGRMAAAEILGKDLPQVPQ-DSAMGALIHHIT 393 >gi|257465869|ref|ZP_05630180.1| tRNA (uracil-5-)-methyltransferase Gid [Fusobacterium gonidiaformans ATCC 25563] gi|315917026|ref|ZP_07913266.1| tRNA (uracil-5-)-methyltransferase Gid [Fusobacterium gonidiaformans ATCC 25563] gi|313690901|gb|EFS27736.1| tRNA (uracil-5-)-methyltransferase Gid [Fusobacterium gonidiaformans ATCC 25563] Length = 435 Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust. Identities = 31/85 (36%), Positives = 39/85 (45%), Gaps = 1/85 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT-LETKKISGLFLAG 367 G T L Q + IP L++ IR G +IN +L L K + L+ AG Sbjct: 279 GFQTNLKWGEQKRVFSMIPALKQAEFIRYGVMHRNTFINSTKLLEKDLSLKTQNNLYFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARK 392 QI G GY A A G +A IN A K Sbjct: 339 QITGGEGYVAAMATGCMAAINIANK 363 Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 55/130 (42%), Gaps = 25/130 (19%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGG--LGK 55 +VIV+G G AG EA AK G L H + C+ ++GG LG Sbjct: 4 EVIVVGAGLAGSEATYQLAKRGIPVRLYEMKQQKKTEAHHYDYFAELVCSNSLGGDHLGN 63 Query: 56 --GHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILS 113 G + E+ LD L+ RVAD + PA G DR + + R + + Sbjct: 64 ASGLMKEELRLLDSLLVRVADETKV----------PA--GQALAVDRHGFSEKITRILRN 111 Query: 114 QENLDVIQGE 123 EN+ +++ E Sbjct: 112 MENITIVEEE 121 >gi|126736453|ref|ZP_01752194.1| gid protein [Roseobacter sp. CCS2] gi|126713991|gb|EBA10861.1| gid protein [Roseobacter sp. CCS2] Length = 451 Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust. Identities = 29/79 (36%), Positives = 38/79 (48%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q +TIPGLE+ R G +IN P L + + + AG Sbjct: 286 GFQTKMKYAAQKAVFKTIPGLEEAEFARLGGIHRNTFINAPTLLDDEMRLRSRPNIRFAG 345 Query: 368 QINGTTGYEEAAAQGLVAG 386 QI G GY E+AA GL+AG Sbjct: 346 QITGVEGYVESAAMGLLAG 364 >gi|307265444|ref|ZP_07547000.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Thermoanaerobacter wiegelii Rt8.B1] gi|306919558|gb|EFN49776.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Thermoanaerobacter wiegelii Rt8.B1] Length = 52 Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust. Identities = 19/40 (47%), Positives = 34/40 (85%) Query: 576 LSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKK 615 +SNE KEKL+ ++P ++ QAS+I G++PA +++LLIY+++ Sbjct: 1 MSNEAKEKLTKIRPTSIGQASRISGVSPADISVLLIYMQQ 40 >gi|56696568|ref|YP_166925.1| tRNA (uracil-5-)-methyltransferase Gid [Ruegeria pomeroyi DSS-3] gi|81170599|sp|Q5LST0|TRMFO_SILPO RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|56678305|gb|AAV94971.1| gid protein [Ruegeria pomeroyi DSS-3] Length = 449 Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust. Identities = 35/109 (32%), Positives = 50/109 (45%), Gaps = 2/109 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q +TIPGLE + R G ++N P L + K + AG Sbjct: 286 GFQTKMKYGAQTAVFKTIPGLENASFARLGGIHRNTFLNSPTLLDAQMRMKSRPNIRFAG 345 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 QI G GY E+AA GL+AG +A + + DS +G +I +T Sbjct: 346 QITGVEGYVESAAMGLLAGRLAAAEIQG-RALPEVPQDSAMGALIHHIT 393 >gi|159044024|ref|YP_001532818.1| tRNA (uracil-5-)-methyltransferase Gid [Dinoroseobacter shibae DFL 12] gi|189040806|sp|A8LK18|TRMFO_DINSH RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|157911784|gb|ABV93217.1| gid protein [Dinoroseobacter shibae DFL 12] Length = 451 Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust. Identities = 31/83 (37%), Positives = 40/83 (48%), Gaps = 1/83 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q + +R IPGLE+ R G +IN P L + L AG Sbjct: 286 GFQTKMKYGAQKEVLRMIPGLEEARFARLGGIHRNTFINAPTLLDDQMRLHSRPNLRFAG 345 Query: 368 QINGTTGYEEAAAQGLVAGINSA 390 QI G GY E+AA GL+AG +A Sbjct: 346 QITGVEGYVESAAMGLLAGRMAA 368 >gi|257452339|ref|ZP_05617638.1| tRNA (uracil-5-)-methyltransferase Gid [Fusobacterium sp. 3_1_5R] gi|317058882|ref|ZP_07923367.1| tRNA (uracil-5-)-methyltransferase Gid [Fusobacterium sp. 3_1_5R] gi|313684558|gb|EFS21393.1| tRNA (uracil-5-)-methyltransferase Gid [Fusobacterium sp. 3_1_5R] Length = 435 Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust. Identities = 31/85 (36%), Positives = 38/85 (44%), Gaps = 1/85 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT-LETKKISGLFLAG 367 G T L Q + IP L + IR G +IN +L L K + L+ AG Sbjct: 279 GFQTNLKWGEQKRVFSMIPALRQAEFIRYGVMHRNTFINSTKLLEKDLSLKTQNNLYFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARK 392 QI G GY A A G +A IN A K Sbjct: 339 QITGGEGYVAAMATGCMAAINIANK 363 Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 56/130 (43%), Gaps = 25/130 (19%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGG--LGK 55 +VIV+G G AG EAA AK G L H + C+ ++GG LG Sbjct: 4 EVIVVGAGLAGSEAAYQLAKRGIPVRLYEMKQQKKTEAHHYDYFAELVCSNSLGGDHLGN 63 Query: 56 --GHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILS 113 G + E+ LD L+ RVAD + PA G DR + + + + + Sbjct: 64 ASGLMKEELRLLDSLLVRVADETKV----------PA--GQALAVDRHGFSEKITQILRN 111 Query: 114 QENLDVIQGE 123 EN+ +++ E Sbjct: 112 MENITIVEEE 121 >gi|261368260|ref|ZP_05981143.1| tRNA:M(5)U-54 methyltransferase [Subdoligranulum variabile DSM 15176] gi|282569775|gb|EFB75310.1| tRNA:M(5)U-54 methyltransferase [Subdoligranulum variabile DSM 15176] Length = 437 Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust. Identities = 84/396 (21%), Positives = 140/396 (35%), Gaps = 63/396 (15%) Query: 10 VIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGLGKGHLVR 60 +IG G AGCEAA A G L HK+ + C+ ++ Sbjct: 5 IIGAGLAGCEAALWLADAGVQVDLYEQKPGKFSPAHKSEGFAELICSNSLK-------AE 57 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQA------DRELYRLAMQREILSQ 114 D+ GL+ ++ R + PA R A DR+++ A+ ++ Sbjct: 58 RPDSASGLLK-------LEMRAMGSHLLPAAETARVAAGGALAVDRDVFSAAVTNQVERH 110 Query: 115 ENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHI-GKLKIPAGR 173 N+ + + EV + ++ ++ LT G + + G ++ Sbjct: 111 PNITIHREEVTALDESVPVL------------VASGPLTEGALAEAIAALTGNHRL---S 155 Query: 174 MGDSPSNSLFNSFMKFD--FDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD 231 D+ + + + +D F R G D ++K E + +F Sbjct: 156 FYDAVAPIVTAESLDYDKVFAASRYGRG---EADYLNCPFNKEEYE---------AFHAA 203 Query: 232 KITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGH 291 I + +L + M I+ A D +GP + D R G R Sbjct: 204 LIAAERAPLHDFDGDLTVYEGCMP-IEVMAARGADTIRFGPLRPVGLRDP--RTGHRPWA 260 Query: 292 QIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKE 350 + L E + G T L Q + IPGLE +R G ++ +P+ Sbjct: 261 NVQLRAENTARTLYNLVGFQTNLKWGEQKRVFSMIPGLEHAEFVRYGVMHRNTFLESPRV 320 Query: 351 LFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAG 386 L K+ +F AGQI G GY E+AA GL+A Sbjct: 321 LTARQYLKEHPNVFFAGQITGFEGYMESAASGLLAA 356 >gi|325496008|gb|EGC93867.1| NADH:flavin oxidoreductase [Escherichia fergusonii ECD227] Length = 670 Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust. Identities = 22/45 (48%), Positives = 31/45 (68%), Gaps = 1/45 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSC 46 + R+ +V+VIGGG AG EAA AA++G T L+ KT +G +SC Sbjct: 380 VTRTTNVVVIGGGTAGMEAACTAAEVGCMTWLLEEKTH-LGGLSC 423 >gi|218547528|ref|YP_002381319.1| NADH:flavin oxidoreductase [Escherichia fergusonii ATCC 35469] gi|218355069|emb|CAQ87677.1| NADH:flavin oxidoreductase [Escherichia fergusonii ATCC 35469] gi|324112515|gb|EGC06492.1| NADH:flavin oxidoreductase/NADH oxidase [Escherichia fergusonii B253] Length = 670 Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust. Identities = 22/45 (48%), Positives = 31/45 (68%), Gaps = 1/45 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSC 46 + R+ +V+VIGGG AG EAA AA++G T L+ KT +G +SC Sbjct: 380 VTRTTNVVVIGGGTAGMEAACTAAEVGCMTWLLEEKTH-LGGLSC 423 >gi|313115000|ref|ZP_07800493.1| tRNA:M(5)U-54 methyltransferase [Faecalibacterium cf. prausnitzii KLE1255] gi|310622691|gb|EFQ06153.1| tRNA:M(5)U-54 methyltransferase [Faecalibacterium cf. prausnitzii KLE1255] Length = 457 Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust. Identities = 29/79 (36%), Positives = 39/79 (49%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE +R G +++ P+ L L K+ +F AG Sbjct: 298 GFQTNLKWGEQKRVFSMIPGLENAEFVRYGVMHRNTFLDAPRVLSAQLCLKEHPNVFFAG 357 Query: 368 QINGTTGYEEAAAQGLVAG 386 QI G GY E+AA GL+A Sbjct: 358 QITGFEGYMESAACGLLAA 376 >gi|259416559|ref|ZP_05740479.1| tRNA:M(5)U-54 methyltransferase [Silicibacter sp. TrichCH4B] gi|259347998|gb|EEW59775.1| tRNA:M(5)U-54 methyltransferase [Silicibacter sp. TrichCH4B] Length = 446 Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust. Identities = 36/110 (32%), Positives = 51/110 (46%), Gaps = 4/110 (3%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q R IPGLE + R G ++N P L + K + AG Sbjct: 286 GFQTKMKYGAQADVFRMIPGLENASFARLGGIHRNTFLNSPTLLDHEMRLKSKPNIRFAG 345 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDC-ICFSRTDSYIGVMIDDLT 416 Q+ G GY E+AA GL+AG +A + LD + DS +G +I +T Sbjct: 346 QVTGVEGYVESAAMGLLAGRFAA--AEILDKELPHVPQDSAMGALIHHIT 393 >gi|160934424|ref|ZP_02081811.1| hypothetical protein CLOLEP_03297 [Clostridium leptum DSM 753] gi|156867097|gb|EDO60469.1| hypothetical protein CLOLEP_03297 [Clostridium leptum DSM 753] Length = 439 Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust. Identities = 33/140 (23%), Positives = 59/140 (42%), Gaps = 12/140 (8%) Query: 282 IVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAI 341 +V+ + N + G T++ +P Q + IP L+ +R G Sbjct: 265 VVQLRQENREKTLYNLVGFQTNLRFPE----------QRRVFSMIPALKNAEFVRYGVMH 314 Query: 342 EYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCIC 400 +I+ P+ L K LF AGQ+ G GY A GL+AG N+ R+ + + Sbjct: 315 RNTFIDSPRLLRRDFSMKTRPDLFFAGQLTGLEGYLAAMFSGLLAGKNAVRRCQGRETLV 374 Query: 401 FSRTDSYIGVMIDDLTSKGV 420 R ++ +G + ++ + V Sbjct: 375 LPR-ETMMGALSHYISDESV 393 >gi|254450907|ref|ZP_05064344.1| tRNA:m(5)U-54 methyltransferase [Octadecabacter antarcticus 238] gi|198265313|gb|EDY89583.1| tRNA:m(5)U-54 methyltransferase [Octadecabacter antarcticus 238] Length = 440 Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust. Identities = 29/79 (36%), Positives = 37/79 (46%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q + IPGLE N R G ++N P L + K + AG Sbjct: 275 GFQTKMKYGAQTDVFKRIPGLENANFARLGGIHRNTFLNSPTLLDGQMRLKSKPNIRFAG 334 Query: 368 QINGTTGYEEAAAQGLVAG 386 QI G GY E+AA GL+AG Sbjct: 335 QITGVEGYVESAAMGLLAG 353 >gi|254486641|ref|ZP_05099846.1| tRNA:m(5)U-54 methyltransferase [Roseobacter sp. GAI101] gi|214043510|gb|EEB84148.1| tRNA:m(5)U-54 methyltransferase [Roseobacter sp. GAI101] Length = 460 Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust. Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q + +R IPGLE + R G ++N P L + + + AG Sbjct: 296 GFQTKMKYGAQTEVLRMIPGLENASFARLGGIHRNTFLNSPTLLDDQMRLRSQPNIRFAG 355 Query: 368 QINGTTGYEEAAAQGLVAG 386 QI G GY E+AA GL+AG Sbjct: 356 QITGVEGYVESAAMGLLAG 374 >gi|83953550|ref|ZP_00962271.1| glucose-inhibited division protein A [Sulfitobacter sp. NAS-14.1] gi|83841495|gb|EAP80664.1| glucose-inhibited division protein A [Sulfitobacter sp. NAS-14.1] Length = 450 Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust. Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q + +R IPGLE + R G ++N P L + + + AG Sbjct: 286 GFQTKMKYGAQTEVLRMIPGLENASFARLGGIHRNTFLNSPTLLDDQMRLRSQPNVRFAG 345 Query: 368 QINGTTGYEEAAAQGLVAG 386 QI G GY E+AA GL+AG Sbjct: 346 QITGVEGYVESAAMGLLAG 364 >gi|291530277|emb|CBK95862.1| tRNA:m(5)U-54 methyltransferase [Eubacterium siraeum 70/3] Length = 453 Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + I GL+ +R G ++N P L ++ AG Sbjct: 292 GFQTNLKFGEQKRVFSMITGLQNAEFVRYGVMHRNTFLNSPGLLDKNFRLIDSDNIYFAG 351 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA G++AGIN AR Sbjct: 352 QMTGVEGYVESAASGIIAGINLAR 375 >gi|291557092|emb|CBL34209.1| tRNA:m(5)U-54 methyltransferase [Eubacterium siraeum V10Sc8a] Length = 453 Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + I GL+ +R G ++N P L ++ AG Sbjct: 292 GFQTNLKFGEQKRVFSMITGLQNAEFVRYGVMHRNTFLNSPGLLDKNFRLIDSDNIYFAG 351 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA G++AGIN AR Sbjct: 352 QMTGVEGYVESAASGIIAGINLAR 375 >gi|167751470|ref|ZP_02423597.1| hypothetical protein EUBSIR_02466 [Eubacterium siraeum DSM 15702] gi|167655278|gb|EDR99407.1| hypothetical protein EUBSIR_02466 [Eubacterium siraeum DSM 15702] Length = 452 Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 1/84 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + I GL+ +R G ++N P L ++ AG Sbjct: 292 GFQTNLKFGEQKRVFSMITGLQNAEFVRYGVMHRNTFLNSPGLLDKNFRLIDSDNIYFAG 351 Query: 368 QINGTTGYEEAAAQGLVAGINSAR 391 Q+ G GY E+AA G++AGIN AR Sbjct: 352 QMTGVEGYVESAASGIIAGINLAR 375 >gi|254436524|ref|ZP_05050018.1| tRNA:m(5)U-54 methyltransferase [Octadecabacter antarcticus 307] gi|198251970|gb|EDY76284.1| tRNA:m(5)U-54 methyltransferase [Octadecabacter antarcticus 307] Length = 451 Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust. Identities = 29/79 (36%), Positives = 37/79 (46%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q + IPGLE N R G ++N P L + K + AG Sbjct: 286 GFQTKMKYGAQTDVFKRIPGLENANFARLGGIHRNTFLNSPTLLDGQMRLKTKPNIRFAG 345 Query: 368 QINGTTGYEEAAAQGLVAG 386 QI G GY E+AA GL+AG Sbjct: 346 QITGVEGYVESAAMGLLAG 364 >gi|220919055|ref|YP_002494359.1| pyridine nucleotide-disulphide oxidoreductase dimerisation region [Anaeromyxobacter dehalogenans 2CP-1] gi|219956909|gb|ACL67293.1| pyridine nucleotide-disulphide oxidoreductase dimerisation region [Anaeromyxobacter dehalogenans 2CP-1] Length = 476 Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust. Identities = 51/153 (33%), Positives = 67/153 (43%), Gaps = 10/153 (6%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDV+VIG G AG A AA LG AL+ K + G S N G +RE A Sbjct: 3 SYDVVVIGSGPAGENGAIQAALLGKKVALV-EKEAVPGGASANT---GTIPSKALRET-A 57 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQAD-RELYRLAMQREILSQENLDVIQGE 123 L R DA GI+ RV P + G R RE R+ R L+ +++ +G Sbjct: 58 LAIQQARSRDAHGIEVRVSGTVTVPELMGRRGLVTAREHSRI---RSALNHAGVEMFRG- 113 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGT 156 +A F I S+ + V+L TGT Sbjct: 114 IASFVDPHTIRVSVPDGGQQDLHAEVVLLATGT 146 >gi|257463633|ref|ZP_05628024.1| tRNA (uracil-5-)-methyltransferase Gid [Fusobacterium sp. D12] gi|317061185|ref|ZP_07925670.1| tRNA (uracil-5-)-methyltransferase Gid [Fusobacterium sp. D12] gi|313686861|gb|EFS23696.1| tRNA (uracil-5-)-methyltransferase Gid [Fusobacterium sp. D12] Length = 435 Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust. Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 2/111 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT-LETKKISGLFLAG 367 G T L Q + IP L++ + +R G ++N +L + L K L+ AG Sbjct: 279 GFQTNLKWGEQKRVFSMIPALKQADFLRYGVMHRNTFLNSTKLLKSDLALKSQENLYFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 QI G GY A + G +A IN A K + + IG +I +T + Sbjct: 339 QITGGEGYVAAISTGCIAAINIANKLQGKEAFILEDVTA-IGALIRYITEE 388 Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust. Identities = 38/130 (29%), Positives = 56/130 (43%), Gaps = 25/130 (19%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGG--LGK 55 +VIV+G G AG EAA AK G S L H + C+ ++GG LG Sbjct: 4 EVIVVGAGLAGSEAAYQLAKRGISVQLYEMKGQKKTEAHHYDYFAELVCSNSLGGNHLGN 63 Query: 56 --GHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILS 113 G + E+ LD L+ RVAD + PA G DR + + + + Sbjct: 64 ASGLMKEELRFLDSLLIRVADETKV----------PA--GQALAVDRHEFSEKVTEILRT 111 Query: 114 QENLDVIQGE 123 EN+ +++ E Sbjct: 112 MENITIVEEE 121 >gi|289580349|ref|YP_003478815.1| geranylgeranyl reductase [Natrialba magadii ATCC 43099] gi|289529902|gb|ADD04253.1| geranylgeranyl reductase [Natrialba magadii ATCC 43099] Length = 458 Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust. Identities = 22/50 (44%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGS-MSCNPAIGG 52 +YD++V+GGG AGC AA AAK G L+ KT G ++C I G Sbjct: 6 EAYDIVVVGGGTAGCFAATTAAKEGLDVVLLERKTEEEGGYIACGDGIKG 55 >gi|14318501|ref|NP_116635.1| Lpd1p [Saccharomyces cerevisiae S288c] gi|118678|sp|P09624|DLDH_YEAST RecName: Full=Dihydrolipoyl dehydrogenase, mitochondrial; AltName: Full=Dihydrolipoamide dehydrogenase; AltName: Full=Glycine decarboxylase complex subunit L; AltName: Full=Lipoamide dehydrogenase component of pyruvate dehydrogenase complex; AltName: Full=Pyruvate dehydrogenase complex E3 component; Flags: Precursor gi|171390|gb|AAA34565.1| dihydrolipoamide dehydrogenase [Saccharomyces cerevisiae] gi|171848|gb|AAB63974.1| lipoamide dehydrongenase [Saccharomyces cerevisiae] gi|559939|emb|CAA86354.1| lpd1, dhlp1 [Saccharomyces cerevisiae] gi|836736|dbj|BAA09220.1| dihydrolipoamide dehydrogenase precursor [Saccharomyces cerevisiae] gi|285811876|tpg|DAA12421.1| TPA: Lpd1p [Saccharomyces cerevisiae S288c] Length = 499 Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust. Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 3/64 (4%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGS---MSCNPAIGGLGKGHL 58 IN+S+DV++IGGG AG AA AA+LG +TA + + G+ + C P+ L HL Sbjct: 23 INKSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHL 82 Query: 59 VREI 62 ++ Sbjct: 83 FHQM 86 >gi|182679203|ref|YP_001833349.1| tRNA (uracil-5-)-methyltransferase Gid [Beijerinckia indica subsp. indica ATCC 9039] gi|205830325|sp|B2IGU6|TRMFO_BEII9 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|182635086|gb|ACB95860.1| gid protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 471 Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust. Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 4/111 (3%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q RTIPGLE+ R G ++N PK L L K L AG Sbjct: 287 GFQTKLKHAEQIALFRTIPGLEQARFARLGGLHRNIFLNTPKVLDMRLRLKADPRLRFAG 346 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKL-DCICFSRTDSYIGVMIDDLTS 417 QI G GY E+A GL+ G +A +L + T + +G +++ +T+ Sbjct: 347 QITGCEGYVESAGIGLLVGRMAA--CERLGESFVPPPTTTALGALLNHITA 395 >gi|259146172|emb|CAY79431.1| Lpd1p [Saccharomyces cerevisiae EC1118] Length = 499 Score = 44.3 bits (103), Expect = 0.067, Method: Compositional matrix adjust. Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 3/64 (4%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGS---MSCNPAIGGLGKGHL 58 IN+S+DV++IGGG AG AA AA+LG +TA + + G+ + C P+ L HL Sbjct: 23 INKSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHL 82 Query: 59 VREI 62 ++ Sbjct: 83 YHQM 86 >gi|151940744|gb|EDN59131.1| dihydrolipoamide dehydrogenase precursor [Saccharomyces cerevisiae YJM789] gi|190406554|gb|EDV09821.1| dihydrolipoamide dehydrogenase precursor [Saccharomyces cerevisiae RM11-1a] gi|207345694|gb|EDZ72432.1| YFL018Cp-like protein [Saccharomyces cerevisiae AWRI1631] gi|323333715|gb|EGA75107.1| Lpd1p [Saccharomyces cerevisiae AWRI796] Length = 499 Score = 44.3 bits (103), Expect = 0.067, Method: Compositional matrix adjust. Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 3/64 (4%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGS---MSCNPAIGGLGKGHL 58 IN+S+DV++IGGG AG AA AA+LG +TA + + G+ + C P+ L HL Sbjct: 23 INKSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHL 82 Query: 59 VREI 62 ++ Sbjct: 83 YHQM 86 >gi|15806684|ref|NP_295404.1| GidA-like protein [Deinococcus radiodurans R1] gi|6459450|gb|AAF11239.1|AE002010_2 GidA-related protein [Deinococcus radiodurans R1] Length = 259 Score = 44.3 bits (103), Expect = 0.068, Method: Compositional matrix adjust. Identities = 50/221 (22%), Positives = 86/221 (38%), Gaps = 51/221 (23%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGG--LGKGHLVREID 63 YDV V+G G +G E A A+ G L++ ++G++ P + G G + ++ Sbjct: 28 YDVAVVGAGVSGTELAWRLARAGQDVLLVSQALDSLGNL-YQPTVAGADFPPGSVFAQVA 86 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 A G D G F +RL ++ EI + + ++Q Sbjct: 87 A-----GMAPDVDGWTF----------------------HRL-LKAEIEATSGIHLLQSC 118 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + E+ + + + + TVVL G+FL+G + IG AGR+ + + L Sbjct: 119 VTALDEEETQV-VLSTWEGPQLHARTVVLAVGSFLKGRLLIGDTMEDAGRLSEVAYDFLA 177 Query: 184 NSFM------------------KFDFDTGRLKTGTPARLDG 206 + + D+D R T P+ LDG Sbjct: 178 DDLLLSGVWLVGAEQTAHGVEGAPDYDV-RFLTPAPSELDG 217 >gi|256268878|gb|EEU04228.1| Lpd1p [Saccharomyces cerevisiae JAY291] Length = 499 Score = 44.3 bits (103), Expect = 0.069, Method: Compositional matrix adjust. Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 3/64 (4%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGS---MSCNPAIGGLGKGHL 58 IN+S+DV++IGGG AG AA AA+LG +TA + + G+ + C P+ L HL Sbjct: 23 INKSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHL 82 Query: 59 VREI 62 ++ Sbjct: 83 YHQM 86 >gi|84625728|ref|YP_453100.1| hydroxylase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84369668|dbj|BAE70826.1| hydroxylase [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 449 Score = 44.3 bits (103), Expect = 0.069, Method: Compositional matrix adjust. Identities = 44/140 (31%), Positives = 66/140 (47%), Gaps = 13/140 (9%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALI---THKTSTIGS--MSCN-PAIGGLGKGHLVR 60 DV+++GGG AGC AA A+LG S L+ H IG + N P + LG VR Sbjct: 14 DVLIVGGGPAGCTAAIALAELGWSVTLLEKEQHPRFHIGESLLPMNMPILERLGVLADVR 73 Query: 61 EIDALDGLMGRVADAAGIQ-FR---VLNVKKGPAVRGPRTQADRELYRLAMQREILSQEN 116 I L D+ G FR L+ K A + PR Q D+ L++ A + ++E Sbjct: 74 AIGVLKRGADFPNDSGGYNTFRFSHALDAKADFAFQVPRAQFDQVLFQRARAAGVDAREQ 133 Query: 117 LDVIQGEVAGFNTEKNIISS 136 + V E F+ E+ ++ + Sbjct: 134 VSV---EQVAFDGEQPLLQA 150 >gi|15826394|pdb|1JEH|A Chain A, Crystal Structure Of Yeast E3, Lipoamide Dehydrogenase gi|15826395|pdb|1JEH|B Chain B, Crystal Structure Of Yeast E3, Lipoamide Dehydrogenase gi|61680085|pdb|1V59|A Chain A, Crystal Structure Of Yeast Lipoamide Dehydrogenase Complexed With Nad+ gi|61680086|pdb|1V59|B Chain B, Crystal Structure Of Yeast Lipoamide Dehydrogenase Complexed With Nad+ Length = 478 Score = 44.3 bits (103), Expect = 0.072, Method: Compositional matrix adjust. Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 3/64 (4%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGS---MSCNPAIGGLGKGHL 58 IN+S+DV++IGGG AG AA AA+LG +TA + + G+ + C P+ L HL Sbjct: 2 INKSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHL 61 Query: 59 VREI 62 ++ Sbjct: 62 FHQM 65 >gi|291280178|ref|YP_003497013.1| glucose inhibited division protein A [Deferribacter desulfuricans SSM1] gi|290754880|dbj|BAI81257.1| glucose inhibited division protein A [Deferribacter desulfuricans SSM1] Length = 433 Score = 43.9 bits (102), Expect = 0.072, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 3/87 (3%) Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EG ++V G T + Q + R IPGLE +R G Y+ + + Sbjct: 270 EGRAYNIV---GFQTKMKIGAQKEVFRLIPGLENAEFLRYGSIHRNTYVRACDYLDSFFR 326 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLV 384 K LF AGQI G GY E+AA L+ Sbjct: 327 YKDDLLFFAGQITGVEGYIESAATSLI 353 Score = 37.4 bits (85), Expect = 8.6, Method: Compositional matrix adjust. Identities = 35/140 (25%), Positives = 58/140 (41%), Gaps = 25/140 (17%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGG----LG 54 V +IGGG AG E A A+ G L H+T +G + C+ ++ Sbjct: 5 VTIIGGGLAGSELAFQLAESGIKVVLYEMRPKKMTEAHETGFLGELLCSNSLKAESLDTA 64 Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114 G L E++ L+ L+ +VA KK G DRE + + + + Sbjct: 65 SGLLKAEMEMLNSLIIKVA------------KKNRVPAGNALAVDREKFAKEITEILENH 112 Query: 115 ENLDVIQGEVAGFNTEKNII 134 EN+ VI+ EV ++ ++ Sbjct: 113 ENIKVIREEVKSIPKDRPLV 132 >gi|149915273|ref|ZP_01903801.1| tRNA (uracil-5-)-methyltransferase Gid [Roseobacter sp. AzwK-3b] gi|149810994|gb|EDM70833.1| tRNA (uracil-5-)-methyltransferase Gid [Roseobacter sp. AzwK-3b] Length = 452 Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust. Identities = 28/79 (35%), Positives = 38/79 (48%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q + R IPGLE + R G ++N P L + + + AG Sbjct: 286 GFQTKMKYGAQTEVFRMIPGLENASFARLGGIHRNTFLNSPTLLDDQMRLRSRPHIRFAG 345 Query: 368 QINGTTGYEEAAAQGLVAG 386 QI G GY E+AA GL+AG Sbjct: 346 QITGVEGYVESAAMGLLAG 364 >gi|58583944|ref|YP_202960.1| hydroxylase [Xanthomonas oryzae pv. oryzae KACC10331] gi|188574732|ref|YP_001911661.1| hydroxylase [Xanthomonas oryzae pv. oryzae PXO99A] gi|58428538|gb|AAW77575.1| hydroxylase [Xanthomonas oryzae pv. oryzae KACC10331] gi|188519184|gb|ACD57129.1| hydroxylase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 461 Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust. Identities = 44/140 (31%), Positives = 66/140 (47%), Gaps = 13/140 (9%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALI---THKTSTIGS--MSCN-PAIGGLGKGHLVR 60 DV+++GGG AGC AA A+LG S L+ H IG + N P + LG VR Sbjct: 26 DVLIVGGGPAGCTAAIALAELGWSVTLLEKEQHPRFHIGESLLPMNMPILERLGVLADVR 85 Query: 61 EIDALDGLMGRVADAAGIQ-FR---VLNVKKGPAVRGPRTQADRELYRLAMQREILSQEN 116 I L D+ G FR L+ K A + PR Q D+ L++ A + ++E Sbjct: 86 AIGVLKRGADFPNDSGGYNTFRFSHALDAKADFAFQVPRAQFDQVLFQRARAAGVDAREQ 145 Query: 117 LDVIQGEVAGFNTEKNIISS 136 + V E F+ E+ ++ + Sbjct: 146 VSV---EQVAFDGEQPLLQA 162 >gi|166710288|ref|ZP_02241495.1| hydroxylase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 449 Score = 43.9 bits (102), Expect = 0.083, Method: Compositional matrix adjust. Identities = 44/140 (31%), Positives = 66/140 (47%), Gaps = 13/140 (9%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALI---THKTSTIGS--MSCN-PAIGGLGKGHLVR 60 DV+++GGG AGC AA A+LG S L+ H IG + N P + LG VR Sbjct: 14 DVLIVGGGPAGCTAAIALAELGWSVTLLEKEQHPRFHIGESLLPMNMPILERLGVLAEVR 73 Query: 61 EIDALDGLMGRVADAAGIQ-FR---VLNVKKGPAVRGPRTQADRELYRLAMQREILSQEN 116 I L D+ G FR L+ K A + PR Q D+ L++ A + ++E Sbjct: 74 AIGVLKRGADFPNDSGGYNTFRFSHALDAKADFAFQVPRAQFDQVLFQRARAVGVDAREQ 133 Query: 117 LDVIQGEVAGFNTEKNIISS 136 + V E F+ E+ ++ + Sbjct: 134 VSV---EQVAFDGEQPLLQA 150 >gi|83952147|ref|ZP_00960879.1| glucose-inhibited division protein A [Roseovarius nubinhibens ISM] gi|83837153|gb|EAP76450.1| glucose-inhibited division protein A [Roseovarius nubinhibens ISM] Length = 453 Score = 43.9 bits (102), Expect = 0.085, Method: Compositional matrix adjust. Identities = 36/110 (32%), Positives = 49/110 (44%), Gaps = 4/110 (3%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q + IPGLE R G ++N P L + K + AG Sbjct: 286 GFQTKMKYGAQADVFKMIPGLENARFARLGGIHRNTFLNSPTLLDDQMRLKSRPHIRFAG 345 Query: 368 QINGTTGYEEAAAQGLVAG-INSARKSNKLDCICFSRTDSYIGVMIDDLT 416 QI G GY E+AA GL+AG + +A S K DS +G +I +T Sbjct: 346 QITGVEGYVESAAMGLLAGRLAAAELSGKTPPPV--PQDSAMGALIHHIT 393 >gi|302339566|ref|YP_003804772.1| fumarate reductase/succinate dehydrogenase flavoprotein domain protein [Spirochaeta smaragdinae DSM 11293] gi|301636751|gb|ADK82178.1| fumarate reductase/succinate dehydrogenase flavoprotein domain protein [Spirochaeta smaragdinae DSM 11293] Length = 489 Score = 43.9 bits (102), Expect = 0.093, Method: Compositional matrix adjust. Identities = 47/171 (27%), Positives = 75/171 (43%), Gaps = 33/171 (19%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 ++++ YDVIV GGG +G AA +A+ GAST LI + +G C G HL Sbjct: 7 IVDKKYDVIVCGGGTSGVAAAIASARGGASTLLIE-RVGALGGQLCFSGPPGFAFAHLFN 65 Query: 61 EIDALDGLMGRVADAAGI--QFRVLNVKKGPAVRGPRTQA-----------DRELYRLA- 106 DAAGI + +K+G A+ + + D + + L Sbjct: 66 PKGE--------QDAAGIIQEIHTRMLKEGHALPHLKPEHRLEGGYTFSYIDPDWFALTI 117 Query: 107 ---MQRE----ILSQENLDVIQ--GEVAGFNTEKNIISSIVMQDNSMIRCS 148 M+ E +L +DV+Q +V G E N ++++Q N +I C+ Sbjct: 118 FEMMEEEGVELLLHSLVVDVVQDGNKVTGVEVE-NTNGTMIIQGNIIIDCT 167 >gi|126737646|ref|ZP_01753376.1| glucose-inhibited division protein A [Roseobacter sp. SK209-2-6] gi|126721039|gb|EBA17743.1| glucose-inhibited division protein A [Roseobacter sp. SK209-2-6] Length = 447 Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust. Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 6/111 (5%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q Q + IPGL+ + R G ++N P L + K + AG Sbjct: 286 GFQTKMKYGAQAQVFKMIPGLKNASFARLGGIHRNTFLNSPTLLDSQMRLKSKPHIRFAG 345 Query: 368 QINGTTGYEEAAAQGLVAGINSARK--SNKLDCICFSRTDSYIGVMIDDLT 416 QI G GY E+AA GL+AG +A + +L + DS +G +I +T Sbjct: 346 QITGVEGYVESAAMGLLAGRLAAAEILDQELPEVP---QDSAMGALIHHIT 393 >gi|90419281|ref|ZP_01227191.1| putative MerA, mercuric ion reductase [Aurantimonas manganoxydans SI85-9A1] gi|90336218|gb|EAS49959.1| putative MerA, mercuric ion reductase [Aurantimonas manganoxydans SI85-9A1] Length = 513 Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust. Identities = 28/63 (44%), Positives = 35/63 (55%), Gaps = 4/63 (6%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYD+ V+G G AG AA AA LGA ALI H TIG N +G + ++R +A Sbjct: 51 SYDLAVVGAGSAGFSAAITAADLGARVALIGH--GTIGGTCVN--VGCVPSKTMIRAAEA 106 Query: 65 LDG 67 L G Sbjct: 107 LHG 109 >gi|197124281|ref|YP_002136232.1| soluble pyridine nucleotide transhydrogenase [Anaeromyxobacter sp. K] gi|196174130|gb|ACG75103.1| pyridine nucleotide-disulphide oxidoreductase dimerisation region [Anaeromyxobacter sp. K] Length = 476 Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust. Identities = 50/153 (32%), Positives = 67/153 (43%), Gaps = 10/153 (6%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDV+VIG G AG A AA LG AL+ K + G S N G +RE A Sbjct: 3 SYDVVVIGSGPAGENGAIQAALLGKKVALV-EKEAVPGGASANT---GTIPSKALRET-A 57 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQAD-RELYRLAMQREILSQENLDVIQGE 123 L R DA GI+ RV P + G R RE R+ R L+ +++ +G Sbjct: 58 LAIQQARSRDAHGIEVRVSGTVTVPELMGRRGLVTAREHSRI---RSALNHAGVEMFRG- 113 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGT 156 +A F I ++ + V+L TGT Sbjct: 114 IASFVDPHTIRVAVPDGGQQDLHAEVVLLATGT 146 >gi|289670826|ref|ZP_06491901.1| hydroxylase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 420 Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust. Identities = 43/140 (30%), Positives = 67/140 (47%), Gaps = 13/140 (9%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALI---THKTSTIGS--MSCN-PAIGGLGKGHLVR 60 DV+++GGG AGC AA A+LG S +L+ H IG + N P + LG VR Sbjct: 14 DVLIVGGGPAGCTAAIALAELGWSVSLLEKEQHPRFHIGESLLPMNMPILQRLGVLEDVR 73 Query: 61 EIDALDGLMGRVADAAGIQ-FR---VLNVKKGPAVRGPRTQADRELYRLAMQREILSQEN 116 + L D+ G FR L+ K A + PR Q D+ L++ A + ++E Sbjct: 74 AVGVLKRGADFPNDSGGYNTFRFSQALDAKADFAFQVPRAQFDQVLFQRARAVGVDARER 133 Query: 117 LDVIQGEVAGFNTEKNIISS 136 + V E F+ E+ ++ + Sbjct: 134 VHV---EQVTFDGEQPVLQA 150 >gi|289664703|ref|ZP_06486284.1| hydroxylase [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 461 Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust. Identities = 43/140 (30%), Positives = 67/140 (47%), Gaps = 13/140 (9%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALI---THKTSTIGS--MSCN-PAIGGLGKGHLVR 60 DV+++GGG AGC AA A+LG S +L+ H IG + N P + LG VR Sbjct: 26 DVLIVGGGPAGCTAAIALAELGWSVSLLEKEQHPRFHIGESLLPMNMPILQRLGVLEDVR 85 Query: 61 EIDALDGLMGRVADAAGIQ-FR---VLNVKKGPAVRGPRTQADRELYRLAMQREILSQEN 116 + L D+ G FR L+ K A + PR Q D+ L++ A + ++E Sbjct: 86 AVGVLKRGADFPNDSGGYNTFRFSQALDAKADFAFQVPRAQFDQVLFQRARAVGVDARER 145 Query: 117 LDVIQGEVAGFNTEKNIISS 136 + V E F+ E+ ++ + Sbjct: 146 VHV---EQVTFDGEQPVLQA 162 >gi|114768818|ref|ZP_01446444.1| glucose-inhibited division protein A [alpha proteobacterium HTCC2255] gi|114549735|gb|EAU52616.1| glucose-inhibited division protein A [alpha proteobacterium HTCC2255] Length = 449 Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust. Identities = 29/79 (36%), Positives = 37/79 (46%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q + + IPGLE R G +IN P L + K + AG Sbjct: 289 GFQTKMKYSEQTRVLSMIPGLENAKFARLGGIHRNTFINSPLLLDDQMRLKTRPNIRFAG 348 Query: 368 QINGTTGYEEAAAQGLVAG 386 QI G GY E+AA GL+AG Sbjct: 349 QITGVEGYVESAAMGLLAG 367 >gi|237717677|ref|ZP_04548158.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|229452996|gb|EEO58787.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] Length = 624 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 44/175 (25%), Positives = 83/175 (47%), Gaps = 16/175 (9%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 + S DV++IGGG +G A +A++GA+T LI +T +G M + + + + Sbjct: 23 DDSVDVLIIGGGASGVTAGIQSARMGAAT-LIVEETEWLGGMLTSAGVSAVDGNY----- 76 Query: 63 DALDGLMGRVADAAGIQFRVLN-VKKG--PAVRGPRTQADRELYRLAMQREILSQENLDV 119 D GL G + + L+ +K G AV + ++ + + + +++NL V Sbjct: 77 DLPAGLFGEFREHLADYYGGLDSLKTGWVSAVLFEPSVGNKIFHEM-----VDAEKNLKV 131 Query: 120 IQ-GEVAGFNTEKNI-ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAG 172 + EK++ I+ I MQD+++ + S +L GT L + + +K G Sbjct: 132 WHNATLVKLEREKDVWIAQIQMQDHTIKKVSAKILIDGTELGDIAKMCGVKYDIG 186 >gi|119386785|ref|YP_917840.1| tRNA (uracil-5-)-methyltransferase Gid [Paracoccus denitrificans PD1222] gi|166989563|sp|A1B9F0|TRMFO_PARDP RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|119377380|gb|ABL72144.1| gid protein [Paracoccus denitrificans PD1222] Length = 446 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 2/109 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q R IPGL+ + R G ++N P+ + L + L AG Sbjct: 285 GFQTKMKYGAQVDVFRRIPGLQDASFARLGGIHRNTFLNSPRLIDDRLRLRARPHLRFAG 344 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 Q+ G GY E+AA GL+AG +A ++ D T S +G ++ +T Sbjct: 345 QVTGVEGYVESAAMGLLAGRMAAAEALGRDLPPPPATTS-MGALVSHIT 392 >gi|86160249|ref|YP_467034.1| soluble pyridine nucleotide transhydrogenase [Anaeromyxobacter dehalogenans 2CP-C] gi|85776760|gb|ABC83597.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Anaeromyxobacter dehalogenans 2CP-C] Length = 476 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 50/153 (32%), Positives = 67/153 (43%), Gaps = 10/153 (6%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDV+VIG G AG A AA LG AL+ K + G S N G +RE A Sbjct: 3 SYDVVVIGSGPAGENGAIQAALLGKKVALV-EKEAVPGGASANT---GTIPSKALRET-A 57 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQAD-RELYRLAMQREILSQENLDVIQGE 123 L R DA GI+ RV P + G R RE R+ R L+ +++ +G Sbjct: 58 LAIQQARSRDAHGIEVRVSGTVTVPELMGRRGLVTAREHSRI---RSALNHAGVEMFRG- 113 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGT 156 +A F I ++ + V+L TGT Sbjct: 114 IASFVDPHTIRVAVPDGGQQDLHAEVVLLATGT 146 >gi|15055554|gb|AAG38844.2| putative halogenase [Xanthomonas oryzae pv. oryzae] Length = 414 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 44/140 (31%), Positives = 66/140 (47%), Gaps = 13/140 (9%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALI---THKTSTIGS--MSCN-PAIGGLGKGHLVR 60 DV+++GGG AGC AA A+LG S L+ H IG + N P + LG VR Sbjct: 26 DVLIVGGGPAGCTAAIALAELGWSVTLLEKEQHPRFHIGESLLPMNMPILERLGVLADVR 85 Query: 61 EIDALDGLMGRVADAAGIQ-FR---VLNVKKGPAVRGPRTQADRELYRLAMQREILSQEN 116 I L D+ G FR L+ K A + PR Q D+ L++ A + ++E Sbjct: 86 AIGVLKRGADFPNDSGGYNTFRFSHALDAKADFAFQVPRAQFDQVLFQRARAAGVDAREQ 145 Query: 117 LDVIQGEVAGFNTEKNIISS 136 + V E F+ E+ ++ + Sbjct: 146 VSV---EQVAFDGEQPLLQA 162 >gi|84500842|ref|ZP_00999077.1| glucose-inhibited division protein A [Oceanicola batsensis HTCC2597] gi|84390909|gb|EAQ03327.1| glucose-inhibited division protein A [Oceanicola batsensis HTCC2597] Length = 455 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q + R IPGLE R G ++N P L + + + AG Sbjct: 288 GFQTKMKYGAQTEVFRRIPGLENARFARLGGIHRNTFLNSPTLLDDRMRLRSRPNIRFAG 347 Query: 368 QINGTTGYEEAAAQGLVAG 386 QI G GY E+AA GL+AG Sbjct: 348 QITGVEGYVESAAMGLLAG 366 >gi|239831772|ref|ZP_04680101.1| gid protein [Ochrobactrum intermedium LMG 3301] gi|239824039|gb|EEQ95607.1| gid protein [Ochrobactrum intermedium LMG 3301] Length = 495 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 31/79 (39%), Positives = 37/79 (46%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE R G Y+N P L TL K L AG Sbjct: 321 GFQTKLKYGSQTGIFKMIPGLENAEFARLGGLHRNTYLNSPVLLDATLRLKSRETLRFAG 380 Query: 368 QINGTTGYEEAAAQGLVAG 386 Q+ G GY E++A GL+AG Sbjct: 381 QVTGCEGYVESSAIGLLAG 399 >gi|325924867|ref|ZP_08186301.1| flavin-dependent dehydrogenase [Xanthomonas perforans 91-118] gi|325544712|gb|EGD16061.1| flavin-dependent dehydrogenase [Xanthomonas perforans 91-118] Length = 461 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 44/140 (31%), Positives = 65/140 (46%), Gaps = 13/140 (9%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALI---THKTSTIGS--MSCN-PAIGGLGKGHLVR 60 DV+++GGG AGC AA A+LG S L+ H IG + N P + LG VR Sbjct: 26 DVLIVGGGPAGCTAAIALAELGWSVTLLEKAQHPRFHIGESLLPMNMPILERLGVLQDVR 85 Query: 61 EIDALDGLMGRVADAAGIQ-FR---VLNVKKGPAVRGPRTQADRELYRLAMQREILSQEN 116 I L D+ G FR L+ K A + PR Q D L++ A + ++E Sbjct: 86 AIGVLKRGADFPNDSGGYNTFRFSHALDAKADFAFQVPRAQFDHVLFQRARAVGVDAREQ 145 Query: 117 LDVIQGEVAGFNTEKNIISS 136 + V E F+ E+ ++ + Sbjct: 146 VCV---EQVAFDGEQPVLQA 162 >gi|78049746|ref|YP_365921.1| putative oxidoreductase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78038176|emb|CAJ25921.1| putative oxidoreductase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 460 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 44/140 (31%), Positives = 65/140 (46%), Gaps = 13/140 (9%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALI---THKTSTIGS--MSCN-PAIGGLGKGHLVR 60 DV+++GGG AGC AA A+LG S L+ H IG + N P + LG VR Sbjct: 26 DVLIVGGGPAGCTAAIALAELGWSVTLLEKAQHPRFHIGESLLPMNMPILERLGVLQDVR 85 Query: 61 EIDALDGLMGRVADAAGIQ-FR---VLNVKKGPAVRGPRTQADRELYRLAMQREILSQEN 116 I L D+ G FR L+ K A + PR Q D L++ A + ++E Sbjct: 86 AIGVLKRGADFPNDSGGYNTFRFSHALDAKADFAFQVPRAQFDHVLFQRARAVGVDAREQ 145 Query: 117 LDVIQGEVAGFNTEKNIISS 136 + V E F+ E+ ++ + Sbjct: 146 VCV---EQVAFDGEQPVLQA 162 >gi|167747019|ref|ZP_02419146.1| hypothetical protein ANACAC_01731 [Anaerostipes caccae DSM 14662] gi|167653979|gb|EDR98108.1| hypothetical protein ANACAC_01731 [Anaerostipes caccae DSM 14662] Length = 668 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 22/44 (50%), Positives = 31/44 (70%), Gaps = 1/44 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMS 45 I + +V+VIGGG AG EAA AA++G ST LI KT+ +G ++ Sbjct: 384 IKKPCNVVVIGGGTAGLEAACTAAEVGCSTVLI-EKTNQLGGLA 426 >gi|149013516|ref|ZP_01834148.1| hypothetical protein CGSSp19BS75_12383 [Streptococcus pneumoniae SP19-BS75] gi|147762837|gb|EDK69789.1| hypothetical protein CGSSp19BS75_12383 [Streptococcus pneumoniae SP19-BS75] Length = 486 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 23/148 (15%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHL-----VR 60 YDV+VIG G +G AA + +LG T LI K S IG + N +G + V Sbjct: 2 YDVVVIGAGSSGALAAIASGRLGLKTCLI-EKGSRIGGVPINTLMGSFANLYFDDSGRVN 60 Query: 61 EIDALDGLMGRVADAAGIQF----RVLNVKKGPAVRGPRTQADRELYRLAMQREILSQEN 116 + L+ R+ + G F ++NV + P E+Y ++ E+L++ N Sbjct: 61 ASKIVGELIERIIEKGGTVFSSMEELMNVSDFYQITIPYQP---EVYE-SVLTEMLNESN 116 Query: 117 LDVIQGEVAGFNTEKNIISSIVMQDNSM 144 +D++ N E I++IV +N + Sbjct: 117 VDIL------LNVE---INNIVFDNNKI 135 >gi|15789680|ref|NP_279504.1| hypothetical protein VNG0439C [Halobacterium sp. NRC-1] gi|169235394|ref|YP_001688594.1| geranylgeranyl hydrogenase-like protein [Halobacterium salinarum R1] gi|10580048|gb|AAG18984.1| conserved hypothetical protein [Halobacterium sp. NRC-1] gi|167726460|emb|CAP13245.1| geranylgeranyl hydrogenase homolog [Halobacterium salinarum R1] Length = 456 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKT-STIGSMSCNPAIGG 52 M YDV+V+G G AGC AAA A G ++ K+ S G ++C A+ G Sbjct: 1 MPAHEYDVVVVGAGTAGCYAAATVADAGYDVVVVERKSASEAGHIACGDALKG 53 >gi|146277212|ref|YP_001167371.1| tRNA (uracil-5-)-methyltransferase Gid [Rhodobacter sphaeroides ATCC 17025] gi|166989565|sp|A4WRQ2|TRMFO_RHOS5 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|145555453|gb|ABP70066.1| gid protein [Rhodobacter sphaeroides ATCC 17025] Length = 444 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 29/83 (34%), Positives = 39/83 (46%), Gaps = 1/83 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q R IPGLE + R G ++N P L + K + AG Sbjct: 286 GFQTKMKYGAQTSVFRMIPGLENASFARLGGIHRNTFLNSPTLLDDRMRLKLRPNIRFAG 345 Query: 368 QINGTTGYEEAAAQGLVAGINSA 390 Q+ G GY E+AA GL+AG +A Sbjct: 346 QVTGVEGYVESAAMGLLAGRMAA 368 >gi|70725228|ref|YP_252142.1| hypothetical protein SH0227 [Staphylococcus haemolyticus JCSC1435] gi|68445952|dbj|BAE03536.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 453 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 21/158 (13%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALI--THKTSTIGSMSCNPAIGGLGKGHLV 59 +++SYD+IVIG G G AA AA+LG + A++ H ++ C P+ L G + Sbjct: 1 MSKSYDLIVIGAGPGGYVAAIRAAQLGKNVAIVEKQHVGGVCLNVGCIPSKIFLEYGAKM 60 Query: 60 REIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQ-REILSQENLD 118 R+I + A+ GI+ +++ V+ + D+ + + R+ L Q N+D Sbjct: 61 RDIHS--------ANNWGIKTNHIDIDVTSLVK----RKDQVVKTVTDDVRDALRQHNVD 108 Query: 119 VIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGT 156 I+GE K V D ++ ++L TGT Sbjct: 109 FIEGEAEVLEGLK------VQVDQAIYTAKDIILATGT 140 >gi|220928384|ref|YP_002505293.1| HI0933 family protein [Clostridium cellulolyticum H10] gi|219998712|gb|ACL75313.1| HI0933 family protein [Clostridium cellulolyticum H10] Length = 435 Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust. Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 5/61 (8%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCN----PAIGGLGKGHLVRE 61 YDV+VIG G AG AA AA++GA TALI + T+G N P +G + +G L E Sbjct: 18 YDVVVIGSGPAGICAAVSAARMGAKTALI-ERYGTLGGNLTNGAVAPILGSVSRGTLRDE 76 Query: 62 I 62 + Sbjct: 77 L 77 >gi|89070138|ref|ZP_01157467.1| gid protein [Oceanicola granulosus HTCC2516] gi|89044255|gb|EAR50401.1| gid protein [Oceanicola granulosus HTCC2516] Length = 454 Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 1/78 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q + R IPGLE+ + R G ++N P L + K + AG Sbjct: 289 GFQTKMKYGAQTEVFRMIPGLEQASFARLGGIHRNTFLNSPTLLDGEMRLKSRPNIRFAG 348 Query: 368 QINGTTGYEEAAAQGLVA 385 Q+ G GY E+AA GL+A Sbjct: 349 QVTGVEGYVESAAMGLLA 366 >gi|226324664|ref|ZP_03800182.1| hypothetical protein COPCOM_02449 [Coprococcus comes ATCC 27758] gi|225207112|gb|EEG89466.1| hypothetical protein COPCOM_02449 [Coprococcus comes ATCC 27758] Length = 666 Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust. Identities = 24/52 (46%), Positives = 31/52 (59%), Gaps = 10/52 (19%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGL 53 IN+ +V+VIGGG AG EAA AA++G +T LI K P +GGL Sbjct: 380 INKPCNVVVIGGGTAGLEAACTAAEVGCTTFLIEKK----------PELGGL 421 >gi|153009661|ref|YP_001370876.1| tRNA (uracil-5-)-methyltransferase Gid [Ochrobactrum anthropi ATCC 49188] gi|166989562|sp|A6X1E3|TRMFO_OCHA4 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|151561549|gb|ABS15047.1| gid protein [Ochrobactrum anthropi ATCC 49188] Length = 476 Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust. Identities = 31/79 (39%), Positives = 37/79 (46%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE R G Y+N P L TL K L AG Sbjct: 293 GFQTKLKYGSQTGIFKMIPGLENAEFARLGGLHRNTYLNSPVLLDGTLRLKSRETLRFAG 352 Query: 368 QINGTTGYEEAAAQGLVAG 386 Q+ G GY E++A GL+AG Sbjct: 353 QVTGCEGYVESSAIGLLAG 371 >gi|114767416|ref|ZP_01446218.1| glucose-inhibited division protein A [Pelagibaca bermudensis HTCC2601] gi|114540501|gb|EAU43580.1| glucose-inhibited division protein A [Roseovarius sp. HTCC2601] Length = 446 Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 1/83 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q + R IPGLE+ R G ++N P L + + + AG Sbjct: 282 GFQTKMKYGAQTEVFRMIPGLEEAKFARLGGIHRNTFLNSPTLLDAQMRLRSKPNIRFAG 341 Query: 368 QINGTTGYEEAAAQGLVAGINSA 390 QI G GY E++A GL AG +A Sbjct: 342 QITGVEGYVESSAMGLAAGRMAA 364 >gi|83858667|ref|ZP_00952189.1| gid protein, hypothetical [Oceanicaulis alexandrii HTCC2633] gi|83853490|gb|EAP91342.1| gid protein, hypothetical [Oceanicaulis alexandrii HTCC2633] Length = 467 Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust. Identities = 28/79 (35%), Positives = 38/79 (48%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q + IPGLE + R G +++ PK L + K L AG Sbjct: 291 GFQTKMKYGAQTDVFKMIPGLENASFARLGGIHRNTFLHSPKLLDGVMRLKARPSLRFAG 350 Query: 368 QINGTTGYEEAAAQGLVAG 386 QI G GY E+A+ GL+AG Sbjct: 351 QITGVEGYVESASMGLLAG 369 >gi|317471836|ref|ZP_07931171.1| NADH:flavin oxidoreductase/NADH oxidase [Anaerostipes sp. 3_2_56FAA] gi|316900609|gb|EFV22588.1| NADH:flavin oxidoreductase/NADH oxidase [Anaerostipes sp. 3_2_56FAA] Length = 663 Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust. Identities = 22/44 (50%), Positives = 31/44 (70%), Gaps = 1/44 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMS 45 I + +V+VIGGG AG EAA AA++G ST LI KT+ +G ++ Sbjct: 379 IKKPCNVVVIGGGTAGLEAACTAAEVGCSTVLI-EKTNQLGGLA 421 >gi|304391783|ref|ZP_07373725.1| tRNA:M(5)U-54 methyltransferase [Ahrensia sp. R2A130] gi|303296012|gb|EFL90370.1| tRNA:M(5)U-54 methyltransferase [Ahrensia sp. R2A130] Length = 471 Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust. Identities = 29/79 (36%), Positives = 37/79 (46%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + R IPGLE R G Y++ P+ L TL + + AG Sbjct: 289 GFQTKLKYGAQTEIFRLIPGLENAEFARLGGLHRNTYLDSPRLLDDTLRLRSRPEVRFAG 348 Query: 368 QINGTTGYEEAAAQGLVAG 386 QI G GY E+A GL+ G Sbjct: 349 QITGCEGYVESATIGLMTG 367 >gi|207111728|ref|ZP_03245890.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Helicobacter pylori HPKX_438_CA4C1] Length = 39 Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust. Identities = 20/37 (54%), Positives = 26/37 (70%) Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIE 342 Y NG+ST+LP ++Q + I +I GLE I R GYAIE Sbjct: 3 YINGLSTSLPLDVQEKVIHSIKGLENALITRYGYAIE 39 >gi|163794539|ref|ZP_02188510.1| Mercuric reductase MerA [alpha proteobacterium BAL199] gi|159180263|gb|EDP64786.1| Mercuric reductase MerA [alpha proteobacterium BAL199] Length = 475 Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust. Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 4/63 (6%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 S+D+ V+G G AG AA AA LGA ALI H TIG N IG + L+R ++A Sbjct: 13 SFDLAVVGAGSAGFSAAITAADLGARVALIGH--GTIGGTCVN--IGCVPSKTLIRAVEA 68 Query: 65 LDG 67 + G Sbjct: 69 VRG 71 >gi|26006758|sp|O68141|TRMFO_RHOCA RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|3128379|gb|AAC16231.1| gid protein [Rhodobacter capsulatus SB 1003] Length = 445 Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q + IPGLE+ + R G ++N P L + + L AG Sbjct: 284 GFQTKMKYGAQTAVFKMIPGLEQASFARLGGIHRNTFLNSPTLLDDQMRLRARPNLRFAG 343 Query: 368 QINGTTGYEEAAAQGLVAG 386 Q+ G GY E+AA GL+AG Sbjct: 344 QVTGVEGYVESAAMGLLAG 362 >gi|294626782|ref|ZP_06705375.1| hydroxylase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292598898|gb|EFF43042.1| hydroxylase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 449 Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust. Identities = 44/140 (31%), Positives = 64/140 (45%), Gaps = 13/140 (9%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALI---THKTSTIGS--MSCN-PAIGGLGKGHLVR 60 DV+++GGG AGC AA A+LG S L+ H IG + N P + LG VR Sbjct: 14 DVLIVGGGPAGCTAAIALAELGWSVTLLEKAQHPRFHIGESLLPMNMPILERLGVLEDVR 73 Query: 61 EIDALDGLMGRVADAAGIQ-FR---VLNVKKGPAVRGPRTQADRELYRLAMQREILSQEN 116 I L D+ G FR L+ K A + PR Q D L++ A + ++E Sbjct: 74 AIGVLKRGADFPNDSGGYNTFRFSHALDAKSDFAFQVPRAQFDHVLFQRARAMGVDAREQ 133 Query: 117 LDVIQGEVAGFNTEKNIISS 136 + V E F+ E ++ + Sbjct: 134 VCV---EQVAFDGEHPVLQA 150 >gi|294665764|ref|ZP_06731036.1| hydroxylase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292604459|gb|EFF47838.1| hydroxylase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 449 Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust. Identities = 44/140 (31%), Positives = 64/140 (45%), Gaps = 13/140 (9%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALI---THKTSTIGS--MSCN-PAIGGLGKGHLVR 60 DV+++GGG AGC AA A+LG S L+ H IG + N P + LG VR Sbjct: 14 DVLIVGGGPAGCTAAIALAELGWSVTLLEKAQHPRFHIGESLLPMNMPILERLGVLEDVR 73 Query: 61 EIDALDGLMGRVADAAGIQ-FR---VLNVKKGPAVRGPRTQADRELYRLAMQREILSQEN 116 I L D+ G FR L+ K A + PR Q D L++ A + ++E Sbjct: 74 AIGVLKRGADFPNDSGGYNTFRFSHALDAKADFAFQVPRAQFDHVLFQRARAMGVDAREQ 133 Query: 117 LDVIQGEVAGFNTEKNIISS 136 + V E F+ E ++ + Sbjct: 134 VCV---EQVAFDGEHPVLQA 150 >gi|294677498|ref|YP_003578113.1| glucose-inhibited division protein A [Rhodobacter capsulatus SB 1003] gi|294476318|gb|ADE85706.1| glucose-inhibited division protein A [Rhodobacter capsulatus SB 1003] Length = 445 Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q + IPGLE+ + R G ++N P L + + L AG Sbjct: 284 GFQTKMKYGAQTAVFKMIPGLEQASFARLGGIHRNTFLNSPTLLDDQMRLRARPNLRFAG 343 Query: 368 QINGTTGYEEAAAQGLVAG 386 Q+ G GY E+AA GL+AG Sbjct: 344 QVTGVEGYVESAAMGLLAG 362 >gi|322369829|ref|ZP_08044391.1| geranylgeranyl reductase [Haladaptatus paucihalophilus DX253] gi|320550165|gb|EFW91817.1| geranylgeranyl reductase [Haladaptatus paucihalophilus DX253] Length = 455 Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKT-STIGSMSCNPAIGG 52 ++ YD++V+G G +GC AAA A+ G A++ KT G ++C A+ G Sbjct: 1 MSEQYDMVVVGAGTSGCYAAATVAREGYDVAVVERKTEEEAGHIACGDALKG 52 >gi|126729677|ref|ZP_01745490.1| glucose-inhibited division protein A [Sagittula stellata E-37] gi|126709796|gb|EBA08849.1| glucose-inhibited division protein A [Sagittula stellata E-37] Length = 452 Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust. Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q + IPGLE+ + R G ++N P L + + + AG Sbjct: 288 GFQTKMKYGAQASVFKMIPGLEEASFARLGGIHRNTFLNSPTLLDAQMRLRSKPNIRFAG 347 Query: 368 QINGTTGYEEAAAQGLVAG 386 Q+ G GY E+AA GL+AG Sbjct: 348 QVTGVEGYVESAAMGLLAG 366 Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 57/134 (42%), Gaps = 16/134 (11%) Query: 10 VIGGGHAGCEAAAVAAKLGASTAL---------ITHKTSTIGSMSCNPAIGGLGKGHLVR 60 ++GGG AG EAA AA +G S L H+T +G M C+ + Sbjct: 9 IVGGGMAGSEAAWQAANMGVSVVLHEMRPQVKTFAHRTGNMGEMVCSNSFRSDDD----- 63 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E +A+ L + A G+ + + PA G DR+ + A+ + + N+ + Sbjct: 64 EQNAVGLLHWEMRTAEGLIISTAHRHRLPA--GGALAVDRDPFSEAVTKALTDHPNIAIS 121 Query: 121 QGEVAGFNTEKNII 134 EV+ +E + I Sbjct: 122 HEEVSELPSEGHWI 135 >gi|218512400|ref|ZP_03509240.1| tRNA (uracil-5-)-methyltransferase Gid [Rhizobium etli 8C-3] Length = 155 Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 2/73 (2%) Query: 345 YIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSR 403 YIN P L P+L K GL AGQI G GY E+A+ GL+AG +A + K + I Sbjct: 7 YINSPTLLDPSLTLKSRPGLRFAGQITGCEGYVESASVGLMAGRFAAAE-RKGEAILLPP 65 Query: 404 TDSYIGVMIDDLT 416 + +G ++ +T Sbjct: 66 ATTALGSLLGHIT 78 >gi|257063754|ref|YP_003143426.1| tRNA:m(5)U-54 methyltransferase [Slackia heliotrinireducens DSM 20476] gi|256791407|gb|ACV22077.1| tRNA:m(5)U-54 methyltransferase [Slackia heliotrinireducens DSM 20476] Length = 452 Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust. Identities = 29/112 (25%), Positives = 48/112 (42%), Gaps = 13/112 (11%) Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPT---L 355 G T++ +P Q + IPGLE +R G +I L L Sbjct: 283 GFQTNLTFPE----------QKRVFSMIPGLENAEFVRYGVMHRNTFIQAPGLVERSLRL 332 Query: 356 ETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSY 407 + + + +F+AGQ++GT GY EA GL+ +N N ++ T ++ Sbjct: 333 KVETPAPVFVAGQLSGTEGYCEAIMSGLMCALNVYALLNGIEMPAMPETTAF 384 >gi|218282811|ref|ZP_03488969.1| hypothetical protein EUBIFOR_01555 [Eubacterium biforme DSM 3989] gi|218216340|gb|EEC89878.1| hypothetical protein EUBIFOR_01555 [Eubacterium biforme DSM 3989] Length = 435 Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 31/61 (50%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +N YDV+VIGGG AG +A A + GA + LI + +G + G G H E Sbjct: 15 MNNKYDVVVIGGGPAGLASAMAAKQNGAKSVLIIERDKELGGILNQCIHNGFGLHHFKEE 74 Query: 62 I 62 + Sbjct: 75 L 75 >gi|291540955|emb|CBL14066.1| NADH:flavin oxidoreductases, Old Yellow Enzyme family [Roseburia intestinalis XB6B4] Length = 666 Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust. Identities = 22/44 (50%), Positives = 28/44 (63%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMS 45 IN+ +V+VIGGG AG EAA AA++G +T LI K G S Sbjct: 380 INKPCNVVVIGGGTAGLEAACTAAEVGCTTFLIEKKAELGGLAS 423 >gi|254462428|ref|ZP_05075844.1| tRNA:m(5)U-54 methyltransferase [Rhodobacterales bacterium HTCC2083] gi|206679017|gb|EDZ43504.1| tRNA:m(5)U-54 methyltransferase [Rhodobacteraceae bacterium HTCC2083] Length = 450 Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q ++IPGLE + R G ++N P L + K + AG Sbjct: 289 GFQTKMRYGAQADVFKSIPGLENASFARLGGIHRNTFLNSPTLLDSQMRLKSKPHIRFAG 348 Query: 368 QINGTTGYEEAAAQGLVAG 386 QI G GY E+A+ GL+AG Sbjct: 349 QITGVEGYVESASMGLLAG 367 >gi|240144475|ref|ZP_04743076.1| NADH:flavin oxidoreductase [Roseburia intestinalis L1-82] gi|257203509|gb|EEV01794.1| NADH:flavin oxidoreductase [Roseburia intestinalis L1-82] Length = 666 Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust. Identities = 22/44 (50%), Positives = 28/44 (63%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMS 45 IN+ +V+VIGGG AG EAA AA++G +T LI K G S Sbjct: 380 INKPCNVVVIGGGTAGLEAACTAAEVGCTTFLIEKKAELGGLAS 423 >gi|126466350|ref|YP_001041459.1| geranylgeranyl reductase [Staphylothermus marinus F1] gi|126015173|gb|ABN70551.1| geranylgeranyl reductase [Staphylothermus marinus F1] Length = 458 Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust. Identities = 24/47 (51%), Positives = 28/47 (59%), Gaps = 1/47 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKT-STIGSMSCNPAIG 51 YDVIV+G G AG AA V A G + A+I K S IG +C AIG Sbjct: 3 YDVIVVGAGVAGLNAAFVLASKGFNVAIIESKPRSRIGDKTCGDAIG 49 >gi|153953634|ref|YP_001394399.1| enoate reductase [Clostridium kluyveri DSM 555] gi|219854256|ref|YP_002471378.1| hypothetical protein CKR_0913 [Clostridium kluyveri NBRC 12016] gi|146346515|gb|EDK33051.1| Predicted enoate reductase [Clostridium kluyveri DSM 555] gi|219567980|dbj|BAH05964.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 666 Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust. Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 10/54 (18%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGK 55 + R +V+VIGGG +G EAA AA+LG +T L K P +GGL K Sbjct: 379 VKRQTNVVVIGGGTSGLEAACTAAELGCNTFLFEKK----------PYLGGLAK 422 >gi|126700303|ref|YP_001089200.1| putative lipoprotein [Clostridium difficile 630] gi|255101857|ref|ZP_05330834.1| putative lipoprotein [Clostridium difficile QCD-63q42] gi|255307726|ref|ZP_05351897.1| putative lipoprotein [Clostridium difficile ATCC 43255] gi|115251740|emb|CAJ69575.1| putative lipoprotein [Clostridium difficile] Length = 408 Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust. Identities = 95/424 (22%), Positives = 171/424 (40%), Gaps = 63/424 (14%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR--EIDAL 65 V++IGGG AG AA+ A + G LI K +G AI G G+ ++ EI+ L Sbjct: 4 VVIIGGGPAGMIAASTACEKGYDVTLI-EKNHKLGK---KLAITGKGRCNITNACEIEEL 59 Query: 66 ------------DGLMGRVADAAGIQFRVLNVKKGPAVRGPRT--QADRELYRL-AMQRE 110 D F L VK RG R ++D+ + A++R+ Sbjct: 60 IENVPTNGKFLYSAFYTFTNDDVISMFNNLGVKTKTE-RGKRVFPESDKAFDIVNALERQ 118 Query: 111 ILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTF---LRGVIHIG-K 166 + S++ ++ +V ++ N I +++ D I+C +VV+ TG L G G K Sbjct: 119 LKSKKVNILLNSKVEKIISKNNKIEKVILNDKKEIKCDSVVVATGGLSYPLTGSTGDGYK 178 Query: 167 LKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPF 226 I G SL ++ F T L+ + ++ + + K +K ++D + F Sbjct: 179 FAISQGHTIIDTKPSLIGIEVQESF-TKDLEKLSLRNVEIR-VFNSKQKKVYSDFGELEF 236 Query: 227 S-FMTDKITNRQIECGITRTNLETHRII------MENIKHSAIYSGDIKSY-GPRYCPSI 278 + F D + C + T E + I+ ++ K D + Y ++ ++ Sbjct: 237 TRFGLDGPIIKSASCRMKDTRKENYTILLDLKPALDEEKLDKRVQKDFQKYTNKKFEKAL 296 Query: 279 EDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLE-KVNIIRP 337 +D + + L P +N + PN + + E + + + L+ V RP Sbjct: 297 DDLLPK---------KLIPIIINLSEINPNTVVHQISREQRKNLVHLLKNLKFTVKRYRP 347 Query: 338 -------GYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGY------EEAAAQGLV 384 ++ + IN T+E+K + GLF AG++ Y + A + G + Sbjct: 348 IEEAIITSGGVKVNEINS----STMESKLVEGLFFAGEVIDIDAYTGGFNLQIAFSTGYL 403 Query: 385 AGIN 388 AG N Sbjct: 404 AGFN 407 >gi|332981309|ref|YP_004462750.1| fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein [Mahella australiensis 50-1 BON] gi|332698987|gb|AEE95928.1| fumarate reductase/succinate dehydrogenase flavoprotein domain protein [Mahella australiensis 50-1 BON] Length = 590 Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust. Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 23/144 (15%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 I R YD++++GGG +G AA AA+ G+ TA+I ++ P GG + Sbjct: 7 IERQYDIVIVGGGMSGICAAIAAARHGSKTAIIQNR----------PVFGGNASSEIRMH 56 Query: 62 IDALDGLMGRVADA--AGIQFRVL--NVKKGPAVRGPRTQADRELYRLAMQREILSQENL 117 I D + G +DA GI +L N + P Q ++ M ++ Q+NL Sbjct: 57 ICGAD-VHGSRSDARETGILEEILLENRRVNP-------QMSFSVFDTVMWEKVKFQDNL 108 Query: 118 DV-IQGEVAGFNTEKNIISSIVMQ 140 D+ + + T N I I+ + Sbjct: 109 DMYLNTHMTQVETTDNKIVKIIAE 132 >gi|85702776|ref|ZP_01033880.1| glucose-inhibited division protein A [Roseovarius sp. 217] gi|85671704|gb|EAQ26561.1| glucose-inhibited division protein A [Roseovarius sp. 217] Length = 452 Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q + IPGLE R G ++N P L + + + AG Sbjct: 286 GFQTKMKYGAQTAVFKMIPGLENAQFARLGGIHRNTFLNSPTLLDAQMRLRSRPHIRFAG 345 Query: 368 QINGTTGYEEAAAQGLVAG 386 QI G GY E+AA GL+AG Sbjct: 346 QITGVEGYVESAAMGLLAG 364 >gi|253578808|ref|ZP_04856079.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251849751|gb|EES77710.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 666 Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust. Identities = 20/44 (45%), Positives = 32/44 (72%), Gaps = 1/44 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMS 45 +N++ +V+VIGGG AG EAA AA++G +T L+ K T+G ++ Sbjct: 380 VNKNCNVVVIGGGTAGLEAACTAAEVGCNTFLL-EKGETLGGLA 422 >gi|270295795|ref|ZP_06201995.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270273199|gb|EFA19061.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 720 Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust. Identities = 28/67 (41%), Positives = 35/67 (52%), Gaps = 9/67 (13%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSC--------NPAIG-GLGK 55 SYDVIV GGG AG AAA A++LG ALI + G+ S N +G G Sbjct: 277 SYDVIVTGGGIAGMCAAATASRLGCKVALINDRPVLGGNNSSEVRVHLGGNIGVGPNSGL 336 Query: 56 GHLVREI 62 G ++RE Sbjct: 337 GRMIREF 343 >gi|312136785|ref|YP_004004122.1| fad-dependent pyridine nucleotide-disulfide oxidoreductase [Methanothermus fervidus DSM 2088] gi|311224504|gb|ADP77360.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Methanothermus fervidus DSM 2088] Length = 429 Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust. Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 3/44 (6%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIG 51 V+++GGG AGC AA VA+KLGA LI + +G C A G Sbjct: 4 VVIVGGGWAGCTAAFVASKLGAEVTLIEKSDTLLG---CGLAAG 44 >gi|89054989|ref|YP_510440.1| tRNA (uracil-5-)-methyltransferase Gid [Jannaschia sp. CCS1] gi|122999436|sp|Q28PE7|TRMFO_JANSC RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|88864538|gb|ABD55415.1| gid protein [Jannaschia sp. CCS1] Length = 458 Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q Q IPGL++ + R G +IN P L + + + AG Sbjct: 288 GFQTKMTYGAQKQVFAMIPGLQEASFARLGGIHRNTFINSPTLLDDQMRLRSKPHIRFAG 347 Query: 368 QINGTTGYEEAAAQGLVAG 386 QI G GY E+A+ GL+AG Sbjct: 348 QITGVEGYVESASMGLLAG 366 Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 58/132 (43%), Gaps = 16/132 (12%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGG 52 + ++ + +IGGG AG EAA AA LG + LI H+T + M C+ + Sbjct: 1 MTQNTQLTIIGGGMAGSEAAWQAANLGVNVRLIEMRPKVETFAHRTGNLAEMVCSNSFRS 60 Query: 53 LGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREIL 112 E +A+ L + A + + K PA G DR+ + A+ ++ Sbjct: 61 DDS-----EQNAVGLLHWEMRAANSVIMHTADSHKLPA--GGALAVDRDPFAEAVTAKLH 113 Query: 113 SQENLDVIQGEV 124 + N+++ GEV Sbjct: 114 AHPNIEITYGEV 125 >gi|329850438|ref|ZP_08265283.1| tRNA:m5U-54 methyltransferase [Asticcacaulis biprosthecum C19] gi|328840753|gb|EGF90324.1| tRNA:m5U-54 methyltransferase [Asticcacaulis biprosthecum C19] Length = 463 Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust. Identities = 32/89 (35%), Positives = 42/89 (47%), Gaps = 4/89 (4%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKI---SGLF 364 G T L Q R IPGLE R G +I +PK L L K + + Sbjct: 291 GFQTKLKHGAQADVFRMIPGLENAQFARLGGLHRNTFIQSPKLLDRQLRLKALFPDKSVR 350 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKS 393 AGQ+ G GY E+AA GL+AG +A ++ Sbjct: 351 FAGQLTGVEGYVESAAIGLLAGRFAAAQA 379 >gi|21244819|ref|NP_644401.1| hydroxylase [Xanthomonas axonopodis pv. citri str. 306] gi|21110520|gb|AAM38937.1| hydroxylase [Xanthomonas axonopodis pv. citri str. 306] Length = 449 Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust. Identities = 44/140 (31%), Positives = 64/140 (45%), Gaps = 13/140 (9%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALI---THKTSTIGS--MSCN-PAIGGLGKGHLVR 60 DV+++GGG AGC AA A+LG S L+ H IG + N P + LG VR Sbjct: 14 DVLIVGGGPAGCTAAIALAELGWSVTLLEKAQHPRFHIGESLLPMNMPILERLGVLEDVR 73 Query: 61 EIDALDGLMGRVADAAGIQ-FR---VLNVKKGPAVRGPRTQADRELYRLAMQREILSQEN 116 I L D+ G FR L+ K A + PR Q D L++ A + ++E Sbjct: 74 AIGVLKRGADFPNDSGGYNTFRFSHALDAKADFAFQVPRAQFDHVLFQRARAVGVDAREQ 133 Query: 117 LDVIQGEVAGFNTEKNIISS 136 + V E F+ E ++ + Sbjct: 134 VCV---EQVAFDGEHPVLQA 150 >gi|195151039|ref|XP_002016457.1| GL11586 [Drosophila persimilis] gi|194110304|gb|EDW32347.1| GL11586 [Drosophila persimilis] Length = 93 Score = 41.6 bits (96), Expect = 0.40, Method: Composition-based stats. Identities = 15/25 (60%), Positives = 19/25 (76%) Query: 33 LITHKTSTIGSMSCNPAIGGLGKGH 57 ++TH TIG MSCNP+ GG+GK H Sbjct: 1 MLTHNLETIGEMSCNPSFGGVGKSH 25 >gi|318087146|gb|ADV40165.1| putative dihydrolipoyl dehydrogenase mitochondrial precursor [Latrodectus hesperus] Length = 312 Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust. Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 18/156 (11%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIG----SMSCNPAIGGLGKGHLVRE 61 +D++VIG G G AA AA+LG TA + K +T+G ++ C P+ L HL Sbjct: 41 FDLVVIGSGPGGYVAAIKAAQLGLKTACV-EKNATLGGTCLNVGCIPSKALLHNSHLYHA 99 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 AL L R D G++ + P + ++ A + L A + Q + Sbjct: 100 --ALHDLKNRGIDCDGVKLNL------PKMMEQKSTAVKSLT--AGIAHLFKQNKITHFN 149 Query: 122 GEVAGFNTEKNIISSIVMQDNS-MIRCSTVVLTTGT 156 G G T N ++SI +S +I+C +++ TG+ Sbjct: 150 GH--GKITGTNEVTSIKADGSSDIIKCKNILIATGS 183 >gi|260173064|ref|ZP_05759476.1| hypothetical protein BacD2_14428 [Bacteroides sp. D2] gi|315921341|ref|ZP_07917581.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313695216|gb|EFS32051.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 463 Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust. Identities = 20/33 (60%), Positives = 24/33 (72%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALI 34 ++ +DVIVIGGG AGC AA AA+ GA T LI Sbjct: 43 VDDRWDVIVIGGGPAGCTAAISAAREGAKTLLI 75 >gi|295085242|emb|CBK66765.1| FAD binding domain. [Bacteroides xylanisolvens XB1A] Length = 624 Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust. Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 20/177 (11%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 + S DV++IGGG +G A +A++GA+T LI +T +G M + + + + Sbjct: 23 DDSVDVLIIGGGASGVTAGIQSARMGAAT-LIVEETEWLGGMLTSAGVSAVDGNY----- 76 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILS-----QENL 117 D GL G + + L+ K V L+ ++ +I ++NL Sbjct: 77 DLPAGLFGEFREHLADYYGGLDSLKTGWVSAV-------LFEPSVGNKIFHEMVDVEKNL 129 Query: 118 DVIQ-GEVAGFNTEKNI-ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAG 172 V + EK++ I+ I M+DN++ + +L GT L + + +K G Sbjct: 130 KVWHNATLVKLEREKDVWIAQIQMKDNTIKKIHAKILIDGTELGDIAKMCGVKYDVG 186 >gi|160884179|ref|ZP_02065182.1| hypothetical protein BACOVA_02156 [Bacteroides ovatus ATCC 8483] gi|156110521|gb|EDO12266.1| hypothetical protein BACOVA_02156 [Bacteroides ovatus ATCC 8483] Length = 463 Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust. Identities = 20/33 (60%), Positives = 24/33 (72%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALI 34 ++ +DVIVIGGG AGC AA AA+ GA T LI Sbjct: 43 VDDRWDVIVIGGGPAGCTAAISAAREGAKTLLI 75 >gi|297623441|ref|YP_003704875.1| glucose-inhibited division protein A [Truepera radiovictrix DSM 17093] gi|297164621|gb|ADI14332.1| glucose-inhibited division protein A [Truepera radiovictrix DSM 17093] Length = 259 Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust. Identities = 49/210 (23%), Positives = 81/210 (38%), Gaps = 36/210 (17%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 R +D++V+G G AG E A A+ G L+T T+ CN G G +R Sbjct: 7 TRPHDLLVVGAGLAGSELALTCARAGLDVLLVTTSLDTV----CNL----FGDGASLRPP 58 Query: 63 DA--LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELY--RLAMQRE----ILSQ 114 L L+ + +A Q Q D +Y A+ R + + Sbjct: 59 PGTVLAELVAGLLEAQEAQL----------------QPDGSVYVGAWALHRRAKWALETH 102 Query: 115 ENLDVIQGEVAGFNTEKNIISSIVMQD--NSMIRCSTVVLTTGTFLRGVIHIGKLKIPAG 172 L ++Q V+ E + + + + + RC V L G+FL + +G+L AG Sbjct: 103 PKLHLLQSSVSALKLEAGRVVGVATWEGVDRLARC--VALCAGSFLGARLRVGELTEAAG 160 Query: 173 RMGDSPSNSLFNSFMKFDFDTGRLKTGTPA 202 R+ + + LF+ R + PA Sbjct: 161 RLSEMAYDELFSDLRARGVAFERTERAAPA 190 >gi|254486836|ref|ZP_05100041.1| sarcosine oxidase, alpha subunit family [Roseobacter sp. GAI101] gi|214043705|gb|EEB84343.1| sarcosine oxidase, alpha subunit family [Roseobacter sp. GAI101] Length = 1005 Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust. Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 26/116 (22%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALD 66 DV+VIGGG AG EAA AA GA T ++ +T+ G + P GGL +G V D +D Sbjct: 170 DVLVIGGGVAGLEAARTAALSGA-TVILLEQTAHWGGRA--PVDGGLVEGASV--TDYID 224 Query: 67 GLMGRVADAAGIQFRVLNVKKG-----------------PAVRGPRTQADRELYRL 105 L+ ++ +Q R + G P ++GPR L+R+ Sbjct: 225 ALIAELSAMDNVQMRTRTMGAGVYDHGYVLGYERLKDHAPEIKGPR----HRLWRI 276 >gi|206603102|gb|EDZ39582.1| putative glucose-inhibited division protein A [Leptospirillum sp. Group II '5-way CG'] Length = 427 Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust. Identities = 39/165 (23%), Positives = 67/165 (40%), Gaps = 14/165 (8%) Query: 293 IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKEL 351 + L PE + G T L Q + R IPGLE+ +R G +++ P L Sbjct: 237 VQLRPEDADESAFNLVGFQTRLRYPEQERIFRMIPGLEQARFLRHGSLHRNTFLDAPALL 296 Query: 352 FPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAG--INSARKSN---KLDC-ICFSRTD 405 L + G++ GQI G GY E+ G + ++ A S+ D + + Sbjct: 297 KDDLTLSGLPGVYATGQILGVEGYTESVTMGFLTALVLDGAWASDTPWTFDAKMILPPAE 356 Query: 406 SYIGVMIDDLTSK--GVLEPYRMFTSRAEYRISLRPDNADNRLTP 448 + +G ++ L+ + G P + + + RP A +R P Sbjct: 357 TAMGALLSGLSPRRSGAFAPVNL-----HFGLFPRPSGATSRRIP 396 >gi|310778329|ref|YP_003966662.1| gid protein [Ilyobacter polytropus DSM 2926] gi|309747652|gb|ADO82314.1| gid protein [Ilyobacter polytropus DSM 2926] Length = 436 Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust. Identities = 39/112 (34%), Positives = 54/112 (48%), Gaps = 4/112 (3%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFP-TLETKKISGLFLAG 367 G T L Q + IPGLE + +R G +IN +L TL K ++ AG Sbjct: 280 GFQTNLKWGEQKRVFSMIPGLENADFVRYGVMHRNTFINSTKLLKDTLNLKSNENIYFAG 339 Query: 368 QINGTTGYEEAAAQGLVAGINSA-RKSNKLDCICFSRTDSYIGVMIDDLTSK 418 QI G+ GY A A G++A IN A R K + + R S IG +I +T + Sbjct: 340 QITGSEGYVAAMATGMMAAINIANRLEGKKEFVLDDR--SAIGAIIKYITEE 389 Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 25/131 (19%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIG----GL 53 +V++IG G AG EAA AK G L HK+ G + C+ ++G Sbjct: 4 EVVIIGAGLAGSEAAYQLAKRGIKVKLYEMRPLKNTEAHKSEKFGELVCSNSLGSNATSN 63 Query: 54 GKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILS 113 G + E+ L L+ VAD + PA G DRE + + + + Sbjct: 64 ASGLMKEELRQLGSLLVEVADKNRV----------PA--GQALAVDREGFSKEITETLEN 111 Query: 114 QENLDVIQGEV 124 EN+++I+ E+ Sbjct: 112 MENIEIIREEL 122 >gi|291525823|emb|CBK91410.1| NADH:flavin oxidoreductases, Old Yellow Enzyme family [Eubacterium rectale DSM 17629] gi|291527449|emb|CBK93035.1| NADH:flavin oxidoreductases, Old Yellow Enzyme family [Eubacterium rectale M104/1] Length = 666 Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust. Identities = 21/44 (47%), Positives = 28/44 (63%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMS 45 +N+ +V+VIGGG AG EAA AA++G +T LI K G S Sbjct: 380 VNKPCNVVVIGGGTAGLEAACTAAEVGCTTFLIEKKAELGGLAS 423 >gi|238925193|ref|YP_002938710.1| NADH:flavin oxidoreductase [Eubacterium rectale ATCC 33656] gi|238876869|gb|ACR76576.1| NADH:flavin oxidoreductase [Eubacterium rectale ATCC 33656] Length = 666 Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust. Identities = 21/44 (47%), Positives = 28/44 (63%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMS 45 +N+ +V+VIGGG AG EAA AA++G +T LI K G S Sbjct: 380 VNKPCNVVVIGGGTAGLEAACTAAEVGCTTFLIEKKAELGGLAS 423 >gi|225376088|ref|ZP_03753309.1| hypothetical protein ROSEINA2194_01725 [Roseburia inulinivorans DSM 16841] gi|225212108|gb|EEG94462.1| hypothetical protein ROSEINA2194_01725 [Roseburia inulinivorans DSM 16841] Length = 666 Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust. Identities = 21/44 (47%), Positives = 28/44 (63%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMS 45 +N+ +V+VIGGG AG EAA AA++G +T LI K G S Sbjct: 380 VNKPCNVVVIGGGTAGLEAACTAAEVGCTTFLIEKKAELGGLAS 423 >gi|300856040|ref|YP_003781024.1| enoate reductase [Clostridium ljungdahlii DSM 13528] gi|300436155|gb|ADK15922.1| enoate reductase [Clostridium ljungdahlii DSM 13528] Length = 665 Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust. Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 1/44 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMS 45 + + +V+VIGGG AG EAA AA+LG ST L K S +G ++ Sbjct: 379 VTKQTNVVVIGGGTAGLEAACTAAELGCSTFLF-EKKSYVGGLA 421 >gi|254718998|ref|ZP_05180809.1| tRNA (uracil-5-)-methyltransferase Gid [Brucella sp. 83/13] gi|265983989|ref|ZP_06096724.1| methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase trmFO [Brucella sp. 83/13] gi|306840115|ref|ZP_07472901.1| gid protein [Brucella sp. NF 2653] gi|264662581|gb|EEZ32842.1| methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase trmFO [Brucella sp. 83/13] gi|306404843|gb|EFM61136.1| gid protein [Brucella sp. NF 2653] Length = 466 Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust. Identities = 30/79 (37%), Positives = 36/79 (45%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE R G Y+N P L L K L AG Sbjct: 293 GFQTKLKYGSQTGIFKMIPGLENAEFARLGGLHRNTYLNSPVLLDNVLRLKSRQTLRFAG 352 Query: 368 QINGTTGYEEAAAQGLVAG 386 Q+ G GY E++A GL+AG Sbjct: 353 QVTGCEGYVESSAIGLLAG 371 >gi|124516261|gb|EAY57769.1| putative glucose-inhibited division protein A [Leptospirillum rubarum] Length = 427 Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust. Identities = 39/165 (23%), Positives = 67/165 (40%), Gaps = 14/165 (8%) Query: 293 IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKEL 351 + L PE + G T L Q + R IPGLE+ +R G +++ P L Sbjct: 237 VQLRPEDADESAFNLVGFQTRLRYPEQERIFRMIPGLEQARFLRHGSLHRNTFLDAPALL 296 Query: 352 FPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAG--INSARKSN---KLDC-ICFSRTD 405 L + G++ GQI G GY E+ G + ++ A S+ D + + Sbjct: 297 KDDLTLSGLPGVYATGQILGVEGYTESVTMGFLTALVLDGAWASDTPWTFDAKMILPPAE 356 Query: 406 SYIGVMIDDLTSK--GVLEPYRMFTSRAEYRISLRPDNADNRLTP 448 + +G ++ L+ + G P + + + RP A +R P Sbjct: 357 TAMGALLSGLSPRRSGAFAPVNL-----HFGLFPRPSGATSRRIP 396 >gi|291548100|emb|CBL21208.1| NADH:flavin oxidoreductases, Old Yellow Enzyme family [Ruminococcus sp. SR1/5] Length = 665 Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust. Identities = 19/44 (43%), Positives = 33/44 (75%), Gaps = 1/44 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMS 45 +N++ +V+VIGGG AG EAA AA++G +T L+ K++ +G ++ Sbjct: 380 VNKNCNVVVIGGGTAGLEAACTAAEVGCNTFLL-EKSNELGGLA 422 >gi|237815326|ref|ZP_04594324.1| gid protein [Brucella abortus str. 2308 A] gi|297248244|ref|ZP_06931962.1| tRNA:m(5)U-54 methyltransferase [Brucella abortus bv. 5 str. B3196] gi|237790163|gb|EEP64373.1| gid protein [Brucella abortus str. 2308 A] gi|297175413|gb|EFH34760.1| tRNA:m(5)U-54 methyltransferase [Brucella abortus bv. 5 str. B3196] Length = 478 Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust. Identities = 30/79 (37%), Positives = 36/79 (45%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE R G Y+N P L L K L AG Sbjct: 305 GFQTKLKYGSQTGIFKMIPGLENAEFARLGGLHRNTYLNSPVLLDNVLRLKSRQTLRFAG 364 Query: 368 QINGTTGYEEAAAQGLVAG 386 Q+ G GY E++A GL+AG Sbjct: 365 QVTGCEGYVESSAIGLLAG 383 >gi|160890701|ref|ZP_02071704.1| hypothetical protein BACUNI_03146 [Bacteroides uniformis ATCC 8492] gi|317479769|ref|ZP_07938890.1| hypothetical protein HMPREF1007_02006 [Bacteroides sp. 4_1_36] gi|156859700|gb|EDO53131.1| hypothetical protein BACUNI_03146 [Bacteroides uniformis ATCC 8492] gi|316904062|gb|EFV25895.1| hypothetical protein HMPREF1007_02006 [Bacteroides sp. 4_1_36] Length = 626 Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust. Identities = 28/67 (41%), Positives = 35/67 (52%), Gaps = 9/67 (13%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSC--------NPAIG-GLGK 55 SYDVIV GGG AG AAA A++LG ALI + G+ S N +G G Sbjct: 183 SYDVIVTGGGIAGMCAAATASRLGCKVALINDRPVLGGNNSSEVRVHLGGNIGVGPNSGL 242 Query: 56 GHLVREI 62 G ++RE Sbjct: 243 GRMIREF 249 >gi|17987356|ref|NP_539990.1| tRNA (uracil-5-)-methyltransferase Gid [Brucella melitensis bv. 1 str. 16M] gi|225627384|ref|ZP_03785421.1| gid protein [Brucella ceti str. Cudo] gi|17983041|gb|AAL52254.1| glucose inhibited division protein a [Brucella melitensis bv. 1 str. 16M] gi|225617389|gb|EEH14434.1| gid protein [Brucella ceti str. Cudo] gi|326408915|gb|ADZ65980.1| tRNA (uracil-5-)-methyltransferase Gid [Brucella melitensis M28] Length = 478 Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust. Identities = 30/79 (37%), Positives = 36/79 (45%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE R G Y+N P L L K L AG Sbjct: 305 GFQTKLKYGSQTGIFKMIPGLENAEFARLGGLHRNTYLNSPVLLDNVLRLKSRQTLRFAG 364 Query: 368 QINGTTGYEEAAAQGLVAG 386 Q+ G GY E++A GL+AG Sbjct: 365 QVTGCEGYVESSAIGLLAG 383 >gi|330684440|gb|EGG96164.1| dihydrolipoyl dehydrogenase [Staphylococcus epidermidis VCU121] Length = 450 Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust. Identities = 46/160 (28%), Positives = 68/160 (42%), Gaps = 31/160 (19%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALI--THKTSTIGSMSCNPAIGGLGKGHLVREI 62 +YD++VIG G G AA AA+LG S A++ H T ++ C P+ L G V +I Sbjct: 4 NYDLVVIGAGPGGYVAAIRAAQLGKSVAIVEKQHVGGTCLNVGCIPSKTLLEFGSQVHQI 63 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVR---GPRTQADRELYRLAMQREILSQENLDV 119 A + L G D I + L K V G TQ +L + N+++ Sbjct: 64 HAANDL-GITTDHLNIDYSCLFEHKNNIVHTLTGGVTQ-------------LLKKNNVEL 109 Query: 120 IQGEVA---GFNTEKNIISSIVMQDNSMIRCSTVVLTTGT 156 IQGE G E N ++ ++L TG+ Sbjct: 110 IQGEAVVKDGLTIEVN---------QQSLKAKDIILATGS 140 >gi|296108998|ref|YP_003615947.1| geranylgeranyl reductase [Methanocaldococcus infernus ME] gi|295433812|gb|ADG12983.1| geranylgeranyl reductase [Methanocaldococcus infernus ME] Length = 391 Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGS-MSCNPAIGGL 53 + SYD+IV+G G G +A ++KLGA T L+ K+ IG + C AI GL Sbjct: 4 LKESYDIIVVGAGPGGSCSAYASSKLGAKT-LLVEKSQEIGEPVRCAEAIPGL 55 >gi|260654468|ref|ZP_05859958.1| pyridine nucleotide-disulphide oxidoreductase [Jonquetella anthropi E3_33 E1] gi|260630745|gb|EEX48939.1| pyridine nucleotide-disulphide oxidoreductase [Jonquetella anthropi E3_33 E1] Length = 537 Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust. Identities = 51/167 (30%), Positives = 71/167 (42%), Gaps = 19/167 (11%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALIT------HKTSTIGSMSCNPA--------- 49 S+DVIVIGGG AG AA AA++GAS L+ K G CN A Sbjct: 3 SFDVIVIGGGPAGMMAALRAAQMGASVLLLEKNDELGRKLGLTGRGRCNFAHDEPDAAVL 62 Query: 50 IGGLGKGHLVREIDALD-GLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQ 108 G GKG E + GL VA A R + ++G + P+ D A++ Sbjct: 63 AQGYGKGAAFMEQALREFGLNETVAFFASCGVRAVR-ERGKRLY-PQMGQDSSAVTAALR 120 Query: 109 REILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTG 155 RE+ ++ L + EV G + I ++ + I VL TG Sbjct: 121 RELHARRVLVLSSTEVKGLDASGGKIRRVITRQGE-IDGRAFVLATG 166 >gi|256159616|ref|ZP_05457378.1| tRNA (uracil-5-)-methyltransferase Gid [Brucella ceti M490/95/1] gi|256254896|ref|ZP_05460432.1| tRNA (uracil-5-)-methyltransferase Gid [Brucella ceti B1/94] gi|261222079|ref|ZP_05936360.1| methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase trmFO [Brucella ceti B1/94] gi|265998044|ref|ZP_06110601.1| methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase trmFO [Brucella ceti M490/95/1] gi|260920663|gb|EEX87316.1| methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase trmFO [Brucella ceti B1/94] gi|262552512|gb|EEZ08502.1| methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase trmFO [Brucella ceti M490/95/1] Length = 466 Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust. Identities = 30/79 (37%), Positives = 36/79 (45%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE R G Y+N P L L K L AG Sbjct: 293 GFQTKLKYGSQTGIFKMIPGLENAEFARLGGLHRNTYLNSPVLLDNVLRLKSRQTLRFAG 352 Query: 368 QINGTTGYEEAAAQGLVAG 386 Q+ G GY E++A GL+AG Sbjct: 353 QVTGCEGYVESSAIGLLAG 371 >gi|256113441|ref|ZP_05454282.1| tRNA (uracil-5-)-methyltransferase Gid [Brucella melitensis bv. 3 str. Ether] gi|265994830|ref|ZP_06107387.1| methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase trmFO [Brucella melitensis bv. 3 str. Ether] gi|262765943|gb|EEZ11732.1| methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase trmFO [Brucella melitensis bv. 3 str. Ether] Length = 466 Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust. Identities = 30/79 (37%), Positives = 36/79 (45%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE R G Y+N P L L K L AG Sbjct: 293 GFQTKLKYGSQTGIFKMIPGLENAEFARLGGLHRNTYLNSPVLLDNVLRLKSRQTLRFAG 352 Query: 368 QINGTTGYEEAAAQGLVAG 386 Q+ G GY E++A GL+AG Sbjct: 353 QVTGCEGYVESSAIGLLAG 371 >gi|163843166|ref|YP_001627570.1| tRNA (uracil-5-)-methyltransferase Gid [Brucella suis ATCC 23445] gi|189040804|sp|B0CLM0|TRMFO_BRUSI RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|163673889|gb|ABY38000.1| gid protein [Brucella suis ATCC 23445] Length = 466 Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust. Identities = 30/79 (37%), Positives = 36/79 (45%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE R G Y+N P L L K L AG Sbjct: 293 GFQTKLKYGSQTGIFKMIPGLENAEFARLGGLHRNTYLNSPVLLDNVLRLKSRQTLRFAG 352 Query: 368 QINGTTGYEEAAAQGLVAG 386 Q+ G GY E++A GL+AG Sbjct: 353 QVTGCEGYVESSAIGLLAG 371 >gi|84516180|ref|ZP_01003540.1| glucose-inhibited division protein A [Loktanella vestfoldensis SKA53] gi|84509876|gb|EAQ06333.1| glucose-inhibited division protein A [Loktanella vestfoldensis SKA53] Length = 453 Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust. Identities = 28/79 (35%), Positives = 35/79 (44%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q IPGLE R G +IN P L + + + AG Sbjct: 288 GFQTKMKYGAQKTVFAMIPGLETAEFARLGGIHRNTFINSPSLLDDQMRLRSRPNIRFAG 347 Query: 368 QINGTTGYEEAAAQGLVAG 386 QI G GY E+AA GL+AG Sbjct: 348 QITGVEGYVESAAMGLLAG 366 >gi|256369322|ref|YP_003106830.1| glucose-inhibited division protein A [Brucella microti CCM 4915] gi|255999482|gb|ACU47881.1| glucose-inhibited division protein A [Brucella microti CCM 4915] Length = 466 Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust. Identities = 30/79 (37%), Positives = 36/79 (45%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE R G Y+N P L L K L AG Sbjct: 293 GFQTKLKYGSQTGIFKMIPGLENAEFARLGGLHRNTYLNSPVLLDNVLRLKSRQTLRFAG 352 Query: 368 QINGTTGYEEAAAQGLVAG 386 Q+ G GY E++A GL+AG Sbjct: 353 QVTGCEGYVESSAIGLLAG 371 >gi|62289839|ref|YP_221632.1| tRNA (uracil-5-)-methyltransferase Gid [Brucella abortus bv. 1 str. 9-941] gi|82699764|ref|YP_414338.1| tRNA (uracil-5-)-methyltransferase Gid [Brucella melitensis biovar Abortus 2308] gi|189024080|ref|YP_001934848.1| tRNA (uracil-5-)-methyltransferase Gid [Brucella abortus S19] gi|254689144|ref|ZP_05152398.1| tRNA (uracil-5-)-methyltransferase Gid [Brucella abortus bv. 6 str. 870] gi|254697278|ref|ZP_05159106.1| tRNA (uracil-5-)-methyltransferase Gid [Brucella abortus bv. 2 str. 86/8/59] gi|254730177|ref|ZP_05188755.1| tRNA (uracil-5-)-methyltransferase Gid [Brucella abortus bv. 4 str. 292] gi|256257394|ref|ZP_05462930.1| tRNA (uracil-5-)-methyltransferase Gid [Brucella abortus bv. 9 str. C68] gi|260545414|ref|ZP_05821155.1| methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase trmFO [Brucella abortus NCTC 8038] gi|260754644|ref|ZP_05866992.1| folate-dependent tRNA(M-5-U54)-methyltransferase [Brucella abortus bv. 6 str. 870] gi|260757867|ref|ZP_05870215.1| folate-dependent tRNA(M-5-U54)-methyltransferase [Brucella abortus bv. 4 str. 292] gi|260761690|ref|ZP_05874033.1| folate-dependent tRNA(M-5-U54)-methyltransferase [Brucella abortus bv. 2 str. 86/8/59] gi|260883670|ref|ZP_05895284.1| methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase trmFO [Brucella abortus bv. 9 str. C68] gi|81170597|sp|Q57DL3|TRMFO_BRUAB RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|123546680|sp|Q2YNL7|TRMFO_BRUA2 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|62195971|gb|AAX74271.1| gid protein, hypothetical [Brucella abortus bv. 1 str. 9-941] gi|82615865|emb|CAJ10869.1| Pyridine nucleotide-disulphide oxidoreductase, class I:FAD-dependent pyridine nucleotide-disulphide oxidoreductase:Glucose-in [Brucella melitensis biovar Abortus 2308] gi|189019652|gb|ACD72374.1| glucose-inhibited division protein A [Brucella abortus S19] gi|260096821|gb|EEW80696.1| methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase trmFO [Brucella abortus NCTC 8038] gi|260668185|gb|EEX55125.1| folate-dependent tRNA(M-5-U54)-methyltransferase [Brucella abortus bv. 4 str. 292] gi|260672122|gb|EEX58943.1| folate-dependent tRNA(M-5-U54)-methyltransferase [Brucella abortus bv. 2 str. 86/8/59] gi|260674752|gb|EEX61573.1| folate-dependent tRNA(M-5-U54)-methyltransferase [Brucella abortus bv. 6 str. 870] gi|260873198|gb|EEX80267.1| methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase trmFO [Brucella abortus bv. 9 str. C68] Length = 466 Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust. Identities = 30/79 (37%), Positives = 36/79 (45%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE R G Y+N P L L K L AG Sbjct: 293 GFQTKLKYGSQTGIFKMIPGLENAEFARLGGLHRNTYLNSPVLLDNVLRLKSRQTLRFAG 352 Query: 368 QINGTTGYEEAAAQGLVAG 386 Q+ G GY E++A GL+AG Sbjct: 353 QVTGCEGYVESSAIGLLAG 371 >gi|306840388|ref|ZP_07473153.1| gid protein [Brucella sp. BO2] gi|306289626|gb|EFM60830.1| gid protein [Brucella sp. BO2] Length = 433 Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust. Identities = 30/79 (37%), Positives = 36/79 (45%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE R G Y+N P L L K L AG Sbjct: 260 GFQTKLKYGSQTGIFKMIPGLENAEFARLGGLHRNTYLNSPVLLDNVLRLKSRQTLRFAG 319 Query: 368 QINGTTGYEEAAAQGLVAG 386 Q+ G GY E++A GL+AG Sbjct: 320 QVTGCEGYVESSAIGLLAG 338 >gi|297526968|ref|YP_003668992.1| geranylgeranyl reductase [Staphylothermus hellenicus DSM 12710] gi|297255884|gb|ADI32093.1| geranylgeranyl reductase [Staphylothermus hellenicus DSM 12710] Length = 458 Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust. Identities = 23/47 (48%), Positives = 27/47 (57%), Gaps = 1/47 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKT-STIGSMSCNPAIG 51 YDVIV+G G AG AA V A G A++ K S IG +C AIG Sbjct: 3 YDVIVVGAGVAGLNAAFVLASRGFKVAIVESKPRSRIGDKTCGDAIG 49 >gi|306843793|ref|ZP_07476391.1| gid protein [Brucella sp. BO1] gi|306275871|gb|EFM57587.1| gid protein [Brucella sp. BO1] Length = 466 Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust. Identities = 30/79 (37%), Positives = 36/79 (45%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE R G Y+N P L L K L AG Sbjct: 293 GFQTKLKYGSQTGIFKMIPGLENAEFARLGGLHRNTYLNSPVLLDNVLRLKSRQTLRFAG 352 Query: 368 QINGTTGYEEAAAQGLVAG 386 Q+ G GY E++A GL+AG Sbjct: 353 QVTGCEGYVESSAIGLLAG 371 >gi|23501780|ref|NP_697907.1| tRNA (uracil-5-)-methyltransferase Gid [Brucella suis 1330] gi|148560039|ref|YP_001258873.1| tRNA (uracil-5-)-methyltransferase Gid [Brucella ovis ATCC 25840] gi|225852407|ref|YP_002732640.1| tRNA (uracil-5-)-methyltransferase Gid [Brucella melitensis ATCC 23457] gi|254693628|ref|ZP_05155456.1| tRNA (uracil-5-)-methyltransferase Gid [Brucella abortus bv. 3 str. Tulya] gi|254701658|ref|ZP_05163486.1| tRNA (uracil-5-)-methyltransferase Gid [Brucella suis bv. 5 str. 513] gi|254706896|ref|ZP_05168724.1| tRNA (uracil-5-)-methyltransferase Gid [Brucella pinnipedialis M163/99/10] gi|254709996|ref|ZP_05171807.1| tRNA (uracil-5-)-methyltransferase Gid [Brucella pinnipedialis B2/94] gi|254713997|ref|ZP_05175808.1| tRNA (uracil-5-)-methyltransferase Gid [Brucella ceti M644/93/1] gi|254716944|ref|ZP_05178755.1| tRNA (uracil-5-)-methyltransferase Gid [Brucella ceti M13/05/1] gi|256031490|ref|ZP_05445104.1| tRNA (uracil-5-)-methyltransferase Gid [Brucella pinnipedialis M292/94/1] gi|256044568|ref|ZP_05447472.1| tRNA (uracil-5-)-methyltransferase Gid [Brucella melitensis bv. 1 str. Rev.1] gi|256061001|ref|ZP_05451158.1| tRNA (uracil-5-)-methyltransferase Gid [Brucella neotomae 5K33] gi|256264096|ref|ZP_05466628.1| methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase trmFO [Brucella melitensis bv. 2 str. 63/9] gi|260168624|ref|ZP_05755435.1| tRNA (uracil-5-)-methyltransferase Gid [Brucella sp. F5/99] gi|260563920|ref|ZP_05834406.1| methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase trmFO [Brucella melitensis bv. 1 str. 16M] gi|261213894|ref|ZP_05928175.1| folate-dependent tRNA(M-5-U54)-methyltransferase [Brucella abortus bv. 3 str. Tulya] gi|261218749|ref|ZP_05933030.1| methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase trmFO [Brucella ceti M13/05/1] gi|261314359|ref|ZP_05953556.1| methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase trmFO [Brucella pinnipedialis M163/99/10] gi|261317545|ref|ZP_05956742.1| methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase trmFO [Brucella pinnipedialis B2/94] gi|261321752|ref|ZP_05960949.1| methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase trmFO [Brucella ceti M644/93/1] gi|261325001|ref|ZP_05964198.1| methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase trmFO [Brucella neotomae 5K33] gi|261752212|ref|ZP_05995921.1| methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase trmFO [Brucella suis bv. 5 str. 513] gi|261758098|ref|ZP_06001807.1| methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase trmFO [Brucella sp. F5/99] gi|265988579|ref|ZP_06101136.1| methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase trmFO [Brucella pinnipedialis M292/94/1] gi|265990993|ref|ZP_06103550.1| methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase trmFO [Brucella melitensis bv. 1 str. Rev.1] gi|294852250|ref|ZP_06792923.1| tRNA:m(5)U-54 methyltransferase [Brucella sp. NVSL 07-0026] gi|54037183|sp|P64233|TRMFO_BRUSU RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|54041086|sp|P64232|TRMFO_BRUME RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|166989560|sp|A5VQ76|TRMFO_BRUO2 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|23347710|gb|AAN29822.1| gid protein, putative [Brucella suis 1330] gi|148371296|gb|ABQ61275.1| tRNA:M(5)U-54 methyltransferase [Brucella ovis ATCC 25840] gi|225640772|gb|ACO00686.1| gid protein [Brucella melitensis ATCC 23457] gi|260153936|gb|EEW89028.1| methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase trmFO [Brucella melitensis bv. 1 str. 16M] gi|260915501|gb|EEX82362.1| folate-dependent tRNA(M-5-U54)-methyltransferase [Brucella abortus bv. 3 str. Tulya] gi|260923838|gb|EEX90406.1| methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase trmFO [Brucella ceti M13/05/1] gi|261294442|gb|EEX97938.1| methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase trmFO [Brucella ceti M644/93/1] gi|261296768|gb|EEY00265.1| methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase trmFO [Brucella pinnipedialis B2/94] gi|261300981|gb|EEY04478.1| methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase trmFO [Brucella neotomae 5K33] gi|261303385|gb|EEY06882.1| methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase trmFO [Brucella pinnipedialis M163/99/10] gi|261738082|gb|EEY26078.1| methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase trmFO [Brucella sp. F5/99] gi|261741965|gb|EEY29891.1| methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase trmFO [Brucella suis bv. 5 str. 513] gi|263001777|gb|EEZ14352.1| methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase trmFO [Brucella melitensis bv. 1 str. Rev.1] gi|263094298|gb|EEZ18159.1| methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase trmFO [Brucella melitensis bv. 2 str. 63/9] gi|264660776|gb|EEZ31037.1| methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase trmFO [Brucella pinnipedialis M292/94/1] gi|294820839|gb|EFG37838.1| tRNA:m(5)U-54 methyltransferase [Brucella sp. NVSL 07-0026] Length = 466 Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust. Identities = 30/79 (37%), Positives = 36/79 (45%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE R G Y+N P L L K L AG Sbjct: 293 GFQTKLKYGSQTGIFKMIPGLENAEFARLGGLHRNTYLNSPVLLDNVLRLKSRQTLRFAG 352 Query: 368 QINGTTGYEEAAAQGLVAG 386 Q+ G GY E++A GL+AG Sbjct: 353 QVTGCEGYVESSAIGLLAG 371 >gi|313126581|ref|YP_004036851.1| 2,3-di-o-geranylgeranylglyceryl phosphate reductase [Halogeometricum borinquense DSM 11551] gi|312292946|gb|ADQ67406.1| 2,3-di-O-geranylgeranylglyceryl phosphate reductase [Halogeometricum borinquense DSM 11551] Length = 457 Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust. Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTST-IGSMSCNPAIGG 52 YDV+V+G G +GC AAA A+ G ++ KT+ G ++C A+ G Sbjct: 5 HEYDVVVVGAGTSGCYAAATIAREGLDVVIVERKTADEAGHIACGDALKG 54 >gi|260576783|ref|ZP_05844768.1| gid protein [Rhodobacter sp. SW2] gi|259021035|gb|EEW24346.1| gid protein [Rhodobacter sp. SW2] Length = 446 Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust. Identities = 28/79 (35%), Positives = 36/79 (45%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q + IPGL+ R G ++N P L + K L AG Sbjct: 289 GFQTKMKYGAQTTVFKMIPGLQDARFARLGGIHRNTFLNSPTLLDNRMRLKSRPNLRFAG 348 Query: 368 QINGTTGYEEAAAQGLVAG 386 QI G GY E+AA GL+AG Sbjct: 349 QITGVEGYVESAAMGLLAG 367 >gi|161618854|ref|YP_001592741.1| tRNA (uracil-5-)-methyltransferase Gid [Brucella canis ATCC 23365] gi|254704202|ref|ZP_05166030.1| tRNA (uracil-5-)-methyltransferase Gid [Brucella suis bv. 3 str. 686] gi|260566549|ref|ZP_05837019.1| methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase trmFO [Brucella suis bv. 4 str. 40] gi|261754871|ref|ZP_05998580.1| methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase trmFO [Brucella suis bv. 3 str. 686] gi|189040803|sp|A9MAR7|TRMFO_BRUC2 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|161335665|gb|ABX61970.1| gid protein [Brucella canis ATCC 23365] gi|260156067|gb|EEW91147.1| methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase trmFO [Brucella suis bv. 4 str. 40] gi|261744624|gb|EEY32550.1| methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase trmFO [Brucella suis bv. 3 str. 686] Length = 466 Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust. Identities = 30/79 (37%), Positives = 36/79 (45%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE R G Y+N P L L K L AG Sbjct: 293 GFQTKLKYGSQTGIFKMIPGLENAEFARLGGLHRNTYLNSPVLLDNVLRLKSRQTLRFAG 352 Query: 368 QINGTTGYEEAAAQGLVAG 386 Q+ G GY E++A GL+AG Sbjct: 353 QVTGCEGYVESSAIGLLAG 371 >gi|197301496|ref|ZP_03166575.1| hypothetical protein RUMLAC_00228 [Ruminococcus lactaris ATCC 29176] gi|197299456|gb|EDY33977.1| hypothetical protein RUMLAC_00228 [Ruminococcus lactaris ATCC 29176] Length = 666 Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust. Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 10/52 (19%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGL 53 +N+ +V+VIGGG AG EAA AA++G +T L+ K P +GGL Sbjct: 380 VNKPCNVVVIGGGTAGMEAACTAAEVGCTTFLLEKK----------PYLGGL 421 >gi|293400586|ref|ZP_06644731.1| NADH:flavin oxidoreductase [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305612|gb|EFE46856.1| NADH:flavin oxidoreductase [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 664 Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust. Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 1/44 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMS 45 + + +V+VIGGG AG EAA AA++G +T LI K S +G +S Sbjct: 379 VKKPCNVVVIGGGTAGLEAACTAAEVGCTTFLI-EKESQLGGLS 421 >gi|254976282|ref|ZP_05272754.1| putative lipoprotein [Clostridium difficile QCD-66c26] gi|255093668|ref|ZP_05323146.1| putative lipoprotein [Clostridium difficile CIP 107932] gi|255315417|ref|ZP_05357000.1| putative lipoprotein [Clostridium difficile QCD-76w55] gi|255518082|ref|ZP_05385758.1| putative lipoprotein [Clostridium difficile QCD-97b34] gi|255651199|ref|ZP_05398101.1| putative lipoprotein [Clostridium difficile QCD-37x79] gi|306521046|ref|ZP_07407393.1| putative lipoprotein [Clostridium difficile QCD-32g58] Length = 408 Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust. Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 22/165 (13%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR--EIDAL 65 V++IGGG AG AA+ A + G LI K +G AI G G+ ++ EI+ L Sbjct: 4 VVIIGGGPAGMIAASTACEKGYDVTLI-EKNHKLGK---KLAITGKGRCNITNACEIEEL 59 Query: 66 ------------DGLMGRVADAAGIQFRVLNVKKGPAVRGPRT--QADRELYRL-AMQRE 110 D F L VK RG R ++D+ + A++R+ Sbjct: 60 IENVPTNGKFLYSAFYTFTNDDVISMFNNLGVKTKTE-RGKRVFPESDKAFDIVNALERQ 118 Query: 111 ILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTG 155 + S++ ++ +V ++ N I +++ D I+C +VV+ TG Sbjct: 119 LKSKKVNILLNSKVEKIISKNNKIEKVILNDKKEIKCDSVVVATG 163 >gi|332558056|ref|ZP_08412378.1| tRNA (uracil-5-)-methyltransferase Gid [Rhodobacter sphaeroides WS8N] gi|332275768|gb|EGJ21083.1| tRNA (uracil-5-)-methyltransferase Gid [Rhodobacter sphaeroides WS8N] Length = 444 Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q + IPGLE + R G ++N P L + K + AG Sbjct: 286 GFQTKMKYGAQTAVFKMIPGLENASFARLGGIHRNTFLNSPTLLDDRMRLKLRPNIRFAG 345 Query: 368 QINGTTGYEEAAAQGLVAG 386 Q+ G GY E+AA GL+AG Sbjct: 346 QVTGVEGYVESAAMGLLAG 364 >gi|315301588|ref|ZP_07872695.1| NADH oxidase [Listeria ivanovii FSL F6-596] gi|313630035|gb|EFR98061.1| NADH oxidase [Listeria ivanovii FSL F6-596] Length = 532 Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust. Identities = 21/44 (47%), Positives = 27/44 (61%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMS 45 + R +V+VIGGG AG EAA AA++G +T LI T G S Sbjct: 248 VTRPTNVVVIGGGTAGLEAACTAAEVGCNTTLIEANEQTGGLAS 291 >gi|207111865|ref|ZP_03246027.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Helicobacter pylori HPKX_438_CA4C1] Length = 35 Score = 40.8 bits (94), Expect = 0.72, Method: Composition-based stats. Identities = 16/35 (45%), Positives = 25/35 (71%) Query: 285 FGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQ 319 F E+ HQ+FLEP+ ++ Y NG+ST+LP ++Q Sbjct: 1 FSEKERHQLFLEPQTIHKSEYYINGLSTSLPLDVQ 35 >gi|126462054|ref|YP_001043168.1| tRNA (uracil-5-)-methyltransferase Gid [Rhodobacter sphaeroides ATCC 17029] gi|166989564|sp|A3PJ80|TRMFO_RHOS1 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|126103718|gb|ABN76396.1| gid protein [Rhodobacter sphaeroides ATCC 17029] Length = 444 Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q + IPGLE + R G ++N P L + K + AG Sbjct: 286 GFQTKMKYGAQTAVFKMIPGLENASFARLGGIHRNTFLNSPTLLDDRMRLKLRPNIRFAG 345 Query: 368 QINGTTGYEEAAAQGLVAG 386 Q+ G GY E+AA GL+AG Sbjct: 346 QVTGVEGYVESAAMGLLAG 364 >gi|210610031|ref|ZP_03288210.1| hypothetical protein CLONEX_00396 [Clostridium nexile DSM 1787] gi|210152642|gb|EEA83648.1| hypothetical protein CLONEX_00396 [Clostridium nexile DSM 1787] Length = 667 Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust. Identities = 20/41 (48%), Positives = 28/41 (68%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIG 42 + +S +V+VIGGG AG EAA AA++G +T LI K + G Sbjct: 380 VKKSCNVVVIGGGTAGLEAACTAAEVGCTTFLIEKKANLGG 420 >gi|163747154|ref|ZP_02154510.1| tRNA (uracil-5-)-methyltransferase Gid [Oceanibulbus indolifex HEL-45] gi|161379715|gb|EDQ04128.1| tRNA (uracil-5-)-methyltransferase Gid [Oceanibulbus indolifex HEL-45] Length = 460 Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust. Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q + IPGLE R G +IN P + + + + AG Sbjct: 300 GFQTKMKYGAQTDVFKRIPGLENARFARLGGIHRNSFINSPTLIDDQMRLRSRPNIRFAG 359 Query: 368 QINGTTGYEEAAAQGLVAG 386 QI G GY E+AA G++AG Sbjct: 360 QITGVEGYVESAAMGMLAG 378 >gi|77463182|ref|YP_352686.1| tRNA (uracil-5-)-methyltransferase Gid [Rhodobacter sphaeroides 2.4.1] gi|123592145|sp|Q3J349|TRMFO_RHOS4 RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|77387600|gb|ABA78785.1| Glucose-inhibited division protein A [Rhodobacter sphaeroides 2.4.1] Length = 444 Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q + IPGLE + R G ++N P L + K + AG Sbjct: 286 GFQTKMKYGAQTAVFKMIPGLENASFARLGGIHRNTFLNSPTLLDDRMRLKLRPNIRFAG 345 Query: 368 QINGTTGYEEAAAQGLVAG 386 Q+ G GY E+AA GL+AG Sbjct: 346 QVTGVEGYVESAAMGLLAG 364 >gi|170699923|ref|ZP_02890952.1| YD repeat protein [Burkholderia ambifaria IOP40-10] gi|170135187|gb|EDT03486.1| YD repeat protein [Burkholderia ambifaria IOP40-10] Length = 1412 Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust. Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 7/104 (6%) Query: 171 AGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARL--DGKTIIWDKTEKQFADERLIPFSF 228 AG+ D + +N+F +D D GR P L G + +Q+ D P+ + Sbjct: 1233 AGQYADESTGLHYNTFRFYDPDVGRFINQDPIGLYGGGNLYAYGPNSQQWTD----PWGW 1288 Query: 229 MTDKITNRQIECGITR-TNLETHRIIMENIKHSAIYSGDIKSYG 271 + K++N + GITR N H I+ + K +A + YG Sbjct: 1289 CSVKLSNNMEKSGITRPANSAAHHIVGDTSKQAAPARAILSKYG 1332 >gi|164686727|ref|ZP_02210755.1| hypothetical protein CLOBAR_00322 [Clostridium bartlettii DSM 16795] gi|164604117|gb|EDQ97582.1| hypothetical protein CLOBAR_00322 [Clostridium bartlettii DSM 16795] Length = 431 Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 8/81 (9%) Query: 323 IRTIPGLEKVNIIRP-----GYAIEYDYINPKELFPTLETKKISGLFLAGQING-TTGYE 376 +R +PG E I+ P G +I Y ++P++ + + + +S LF+ G+ +G G+ Sbjct: 275 LRKVPGCENAMIVDPYAGGKGNSIRYMAVSPRDNY--MRAQGMSNLFVGGEKSGFYVGHT 332 Query: 377 EAAAQGLVAGINSARKSNKLD 397 EA G +AG N+AR +D Sbjct: 333 EAICTGSLAGHNAARFCAGVD 353 >gi|326538632|gb|ADZ86847.1| gid protein [Brucella melitensis M5-90] Length = 517 Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust. Identities = 30/79 (37%), Positives = 36/79 (45%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + IPGLE R G Y+N P L L K L AG Sbjct: 293 GFQTKLKYGSQTGIFKMIPGLENAEFARLGGLHRNTYLNSPVLLDNVLRLKSRQTLRFAG 352 Query: 368 QINGTTGYEEAAAQGLVAG 386 Q+ G GY E++A GL+AG Sbjct: 353 QVTGCEGYVESSAIGLLAG 371 >gi|315281072|ref|ZP_07869789.1| NADH oxidase [Listeria marthii FSL S4-120] gi|313615281|gb|EFR88709.1| NADH oxidase [Listeria marthii FSL S4-120] Length = 664 Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust. Identities = 20/41 (48%), Positives = 26/41 (63%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIG 42 + R +V+VIGGG AG EAA AA++G +T LI T G Sbjct: 380 VTRPTNVVVIGGGTAGLEAACTAAEVGCNTTLIEANEQTGG 420 >gi|255026374|ref|ZP_05298360.1| hypothetical protein LmonocytFSL_08600 [Listeria monocytogenes FSL J2-003] Length = 469 Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust. Identities = 20/41 (48%), Positives = 26/41 (63%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIG 42 + R +V+VIGGG AG EAA AA++G +T LI T G Sbjct: 185 VTRPTNVVVIGGGTAGLEAACTAAEVGCNTTLIEANEQTGG 225 >gi|251779942|ref|ZP_04822862.1| NADH oxidase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243084257|gb|EES50147.1| NADH oxidase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 662 Score = 40.8 bits (94), Expect = 0.79, Method: Compositional matrix adjust. Identities = 19/37 (51%), Positives = 26/37 (70%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKT 38 I + +V+VIGGG AG EAA AA++G +T LI K+ Sbjct: 380 IKKQTNVVVIGGGTAGLEAACTAAEVGCTTFLIEQKS 416 >gi|221639039|ref|YP_002525301.1| tRNA (uracil-5-)-methyltransferase Gid [Rhodobacter sphaeroides KD131] gi|259547958|sp|B9KRK8|TRMFO_RHOSK RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|221159820|gb|ACM00800.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gid [Rhodobacter sphaeroides KD131] Length = 444 Score = 40.8 bits (94), Expect = 0.79, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q + IPGLE + R G ++N P L + K + AG Sbjct: 286 GFQTKMKYGAQTAVFKMIPGLENASFARLGGIHRNTFLNSPTLLDDRMRLKLRPNIRFAG 345 Query: 368 QINGTTGYEEAAAQGLVAG 386 Q+ G GY E+AA GL+AG Sbjct: 346 QVTGVEGYVESAAMGLLAG 364 >gi|116871880|ref|YP_848661.1| NADH:flavin oxidoreductase [Listeria welshimeri serovar 6b str. SLCC5334] gi|116740758|emb|CAK19878.1| NADH:flavin oxidoreductase [Listeria welshimeri serovar 6b str. SLCC5334] Length = 664 Score = 40.8 bits (94), Expect = 0.79, Method: Compositional matrix adjust. Identities = 20/41 (48%), Positives = 26/41 (63%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIG 42 + R +V+VIGGG AG EAA AA++G +T LI T G Sbjct: 380 VTRPTNVVVIGGGTAGLEAACTAAEVGCNTTLIEANEQTGG 420 >gi|16799567|ref|NP_469835.1| hypothetical protein lin0492 [Listeria innocua Clip11262] gi|16412932|emb|CAC95724.1| lin0492 [Listeria innocua Clip11262] Length = 664 Score = 40.8 bits (94), Expect = 0.79, Method: Compositional matrix adjust. Identities = 20/41 (48%), Positives = 26/41 (63%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIG 42 + R +V+VIGGG AG EAA AA++G +T LI T G Sbjct: 380 VTRPTNVVVIGGGTAGLEAACTAAEVGCNTTLIEANEQTGG 420 >gi|290894364|ref|ZP_06557328.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071] gi|290556071|gb|EFD89621.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071] Length = 664 Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust. Identities = 20/41 (48%), Positives = 26/41 (63%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIG 42 + R +V+VIGGG AG EAA AA++G +T LI T G Sbjct: 380 VTRPTNVVVIGGGTAGLEAACTAAEVGCNTTLIEANKQTGG 420 >gi|47094715|ref|ZP_00232330.1| NADH:flavin oxidoreductase [Listeria monocytogenes str. 1/2a F6854] gi|254900285|ref|ZP_05260209.1| hypothetical protein LmonJ_10740 [Listeria monocytogenes J0161] gi|254911161|ref|ZP_05261173.1| NADH:flavin oxidoreductase [Listeria monocytogenes J2818] gi|254935489|ref|ZP_05267186.1| NADH:flavin oxidoreductase [Listeria monocytogenes F6900] gi|47016855|gb|EAL07773.1| NADH:flavin oxidoreductase [Listeria monocytogenes str. 1/2a F6854] gi|258608066|gb|EEW20674.1| NADH:flavin oxidoreductase [Listeria monocytogenes F6900] gi|293589088|gb|EFF97422.1| NADH:flavin oxidoreductase [Listeria monocytogenes J2818] Length = 664 Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust. Identities = 20/41 (48%), Positives = 26/41 (63%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIG 42 + R +V+VIGGG AG EAA AA++G +T LI T G Sbjct: 380 VTRPTNVVVIGGGTAGLEAACTAAEVGCNTTLIEANEQTGG 420 >gi|254830526|ref|ZP_05235181.1| hypothetical protein Lmon1_04157 [Listeria monocytogenes 10403S] Length = 664 Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust. Identities = 20/41 (48%), Positives = 26/41 (63%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIG 42 + R +V+VIGGG AG EAA AA++G +T LI T G Sbjct: 380 VTRPTNVVVIGGGTAGLEAACTAAEVGCNTTLIEANEQTGG 420 >gi|16802532|ref|NP_464017.1| hypothetical protein lmo0489 [Listeria monocytogenes EGD-e] gi|224502210|ref|ZP_03670517.1| hypothetical protein LmonFR_06767 [Listeria monocytogenes FSL R2-561] gi|284800764|ref|YP_003412629.1| hypothetical protein LM5578_0512 [Listeria monocytogenes 08-5578] gi|284993950|ref|YP_003415718.1| hypothetical protein LM5923_0511 [Listeria monocytogenes 08-5923] gi|16409865|emb|CAC98568.1| lmo0489 [Listeria monocytogenes EGD-e] gi|284056326|gb|ADB67267.1| hypothetical protein LM5578_0512 [Listeria monocytogenes 08-5578] gi|284059417|gb|ADB70356.1| hypothetical protein LM5923_0511 [Listeria monocytogenes 08-5923] Length = 664 Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust. Identities = 20/41 (48%), Positives = 26/41 (63%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIG 42 + R +V+VIGGG AG EAA AA++G +T LI T G Sbjct: 380 VTRPTNVVVIGGGTAGLEAACTAAEVGCNTTLIEANEQTGG 420 >gi|254829416|ref|ZP_05234103.1| NADH:flavin oxidoreductase [Listeria monocytogenes FSL N3-165] gi|258601830|gb|EEW15155.1| NADH:flavin oxidoreductase [Listeria monocytogenes FSL N3-165] Length = 664 Score = 40.4 bits (93), Expect = 0.83, Method: Compositional matrix adjust. Identities = 20/41 (48%), Positives = 26/41 (63%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIG 42 + R +V+VIGGG AG EAA AA++G +T LI T G Sbjct: 380 VTRPTNVVVIGGGTAGLEAACTAAEVGCNTTLIEASEQTGG 420 >gi|224500415|ref|ZP_03668764.1| hypothetical protein LmonF1_12414 [Listeria monocytogenes Finland 1988] Length = 664 Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust. Identities = 20/41 (48%), Positives = 26/41 (63%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIG 42 + R +V+VIGGG AG EAA AA++G +T LI T G Sbjct: 380 VTRPTNVVVIGGGTAGLEAACTAAEVGCNTTLIEANEQTGG 420 >gi|254824237|ref|ZP_05229238.1| NADH:flavin oxidoreductase [Listeria monocytogenes FSL J1-194] gi|293593470|gb|EFG01231.1| NADH:flavin oxidoreductase [Listeria monocytogenes FSL J1-194] Length = 664 Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust. Identities = 20/41 (48%), Positives = 26/41 (63%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIG 42 + R +V+VIGGG AG EAA AA++G +T LI T G Sbjct: 380 VTRPTNVVVIGGGTAGLEAACTAAEVGCNTTLIEASEQTGG 420 >gi|269792954|ref|YP_003317858.1| gid protein [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100589|gb|ACZ19576.1| gid protein [Thermanaerovibrio acidaminovorans DSM 6589] Length = 444 Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 36/82 (43%), Gaps = 3/82 (3%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLET--KKISGLFL 365 G T L Q + R IP L +R G Y+ PK L L LFL Sbjct: 279 GFQTNLLWGEQERVFRMIPALRDAEFVRKGVMHRNLYVCAPKVLDGYLRPLGAHRRDLFL 338 Query: 366 AGQINGTTGYEEAAAQGLVAGI 387 AGQI G GY E+AA GL A + Sbjct: 339 AGQITGVEGYLESAAMGLCAAM 360 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 43/156 (27%), Positives = 67/156 (42%), Gaps = 33/156 (21%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIG----- 51 +DV VIGGG AG EAA A++G S L H+T +G + C+ ++G Sbjct: 3 FDVEVIGGGLAGVEAAFRLARMGFSVGLYEMRPERRSPAHRTHLLGELVCSNSLGADQET 62 Query: 52 ---GLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQ 108 G+ K L R +G A+ + RV PA R DRE + + Sbjct: 63 SPAGILKAELRR--------LGSPVMASADRNRV------PAGRA--LAVDREGFARDLT 106 Query: 109 REILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSM 144 + S N+ V++ EV T I+++ + + M Sbjct: 107 DMVSSLPNVTVVRREVTSIPTGPCILATGPLTEGEM 142 >gi|217965422|ref|YP_002351100.1| NADH oxidase [Listeria monocytogenes HCC23] gi|217334692|gb|ACK40486.1| NADH oxidase [Listeria monocytogenes HCC23] gi|307570022|emb|CAR83201.1| NADH:flavin oxidoreductase [Listeria monocytogenes L99] Length = 664 Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust. Identities = 20/41 (48%), Positives = 26/41 (63%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIG 42 + R +V+VIGGG AG EAA AA++G +T LI T G Sbjct: 380 VTRPTNVVVIGGGTAGLEAACTAAEVGCNTTLIEASEQTGG 420 >gi|261417251|ref|YP_003250934.1| gid protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373707|gb|ACX76452.1| gid protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|302327075|gb|ADL26276.1| gid protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 443 Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust. Identities = 30/91 (32%), Positives = 37/91 (40%), Gaps = 8/91 (8%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLE-------TKKI 360 G T L Q + +P L R G +I +PK L TL K I Sbjct: 280 GFQTRLKWGTQKEIFTMVPALRNAKFARLGCMHRNTFIESPKFLDKTLRLRPELDCAKDI 339 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSAR 391 + AGQI G+ GY EA A G A N A+ Sbjct: 340 PPTWFAGQITGSEGYTEAVATGWYAAWNMAQ 370 >gi|149203848|ref|ZP_01880817.1| glucose-inhibited division protein A [Roseovarius sp. TM1035] gi|149142965|gb|EDM31007.1| glucose-inhibited division protein A [Roseovarius sp. TM1035] Length = 458 Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust. Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 6/111 (5%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q + IPGLE R G ++N P L + + + +G Sbjct: 292 GFQTKMKYGAQATVFKMIPGLENAQFARLGGIHRNTFLNSPTLLDAQMRLRSRPHIRFSG 351 Query: 368 QINGTTGYEEAAAQGLVAGINSARK--SNKLDCICFSRTDSYIGVMIDDLT 416 QI G GY E+AA GL+AG +A + L + DS +G +I +T Sbjct: 352 QITGVEGYVESAAMGLLAGRLAAAEILGQSLPPVP---QDSAMGALIHHIT 399 >gi|46906735|ref|YP_013124.1| NADH:flavin oxidoreductase [Listeria monocytogenes serotype 4b str. F2365] gi|47093114|ref|ZP_00230890.1| NADH:flavin oxidoreductase [Listeria monocytogenes str. 4b H7858] gi|226223115|ref|YP_002757222.1| NADH:flavin oxidoreductase [Listeria monocytogenes Clip81459] gi|254853858|ref|ZP_05243206.1| NADH:flavin oxidoreductase [Listeria monocytogenes FSL R2-503] gi|254933244|ref|ZP_05266603.1| NADH:flavin oxidoreductase [Listeria monocytogenes HPB2262] gi|254992916|ref|ZP_05275106.1| NADH:flavin oxidoreductase [Listeria monocytogenes FSL J2-064] gi|255522130|ref|ZP_05389367.1| NADH:flavin oxidoreductase [Listeria monocytogenes FSL J1-175] gi|300765140|ref|ZP_07075126.1| NADH:flavin oxidoreductase [Listeria monocytogenes FSL N1-017] gi|46880000|gb|AAT03301.1| NADH:flavin oxidoreductase [Listeria monocytogenes serotype 4b str. F2365] gi|47018487|gb|EAL09244.1| NADH:flavin oxidoreductase [Listeria monocytogenes str. 4b H7858] gi|225875577|emb|CAS04280.1| Putative NADH:flavin oxidoreductase [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258607243|gb|EEW19851.1| NADH:flavin oxidoreductase [Listeria monocytogenes FSL R2-503] gi|293584804|gb|EFF96836.1| NADH:flavin oxidoreductase [Listeria monocytogenes HPB2262] gi|300514111|gb|EFK41172.1| NADH:flavin oxidoreductase [Listeria monocytogenes FSL N1-017] gi|328467559|gb|EGF38621.1| NADH:flavin oxidoreductase [Listeria monocytogenes 1816] gi|332310912|gb|EGJ24007.1| NADH oxidase [Listeria monocytogenes str. Scott A] Length = 664 Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust. Identities = 20/41 (48%), Positives = 26/41 (63%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIG 42 + R +V+VIGGG AG EAA AA++G +T LI T G Sbjct: 380 VTRPTNVVVIGGGTAGLEAACTAAEVGCNTTLIEASEQTGG 420 >gi|255022417|ref|ZP_05294403.1| hypothetical protein LmonocyFSL_00780 [Listeria monocytogenes FSL J1-208] Length = 554 Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust. Identities = 20/41 (48%), Positives = 26/41 (63%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIG 42 + R +V+VIGGG AG EAA AA++G +T LI T G Sbjct: 270 VTRPTNVVVIGGGTAGLEAACTAAEVGCNTTLIEANEQTGG 310 >gi|317471857|ref|ZP_07931192.1| NADH:flavin oxidoreductase/NADH oxidase [Anaerostipes sp. 3_2_56FAA] gi|316900630|gb|EFV22609.1| NADH:flavin oxidoreductase/NADH oxidase [Anaerostipes sp. 3_2_56FAA] Length = 665 Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust. Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 1/44 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMS 45 IN+ +V+VIGGG AG EAA AA++G +T L+ K +G +S Sbjct: 380 INKPCNVVVIGGGTAGLEAACTAAEVGCTTFLL-EKEDHLGGLS 422 >gi|239617564|ref|YP_002940886.1| FAD dependent oxidoreductase [Kosmotoga olearia TBF 19.5.1] gi|239506395|gb|ACR79882.1| FAD dependent oxidoreductase [Kosmotoga olearia TBF 19.5.1] Length = 437 Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 2/68 (2%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALD 66 DV+++GGG AG AA + G T LI H STIG +S + + L E +D Sbjct: 6 DVVIVGGGIAGVHAAIACGRAGLKTTLIEHG-STIGGLSTMGLVNPFMRYWLGSE-KLID 63 Query: 67 GLMGRVAD 74 G+ G + D Sbjct: 64 GIFGELLD 71 >gi|167747041|ref|ZP_02419168.1| hypothetical protein ANACAC_01753 [Anaerostipes caccae DSM 14662] gi|167654001|gb|EDR98130.1| hypothetical protein ANACAC_01753 [Anaerostipes caccae DSM 14662] Length = 665 Score = 40.4 bits (93), Expect = 0.95, Method: Compositional matrix adjust. Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 1/44 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMS 45 IN+ +V+VIGGG AG EAA AA++G +T L+ K +G +S Sbjct: 380 INKPCNVVVIGGGTAGLEAACTAAEVGCTTFLL-EKEDHLGGLS 422 >gi|192291542|ref|YP_001992147.1| tRNA (uracil-5-)-methyltransferase Gid [Rhodopseudomonas palustris TIE-1] gi|192285291|gb|ACF01672.1| gid protein [Rhodopseudomonas palustris TIE-1] Length = 478 Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 1/73 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + RTIPGLE R G ++N PK L +L + L AG Sbjct: 296 GFQTKLKHGAQLRVFRTIPGLENAEFARLGGLHRNTFLNSPKLLDESLRLRASPRLRFAG 355 Query: 368 QINGTTGYEEAAA 380 Q+ G GY E+A+ Sbjct: 356 QMTGCEGYVESAS 368 >gi|39935894|ref|NP_948170.1| tRNA (uracil-5-)-methyltransferase Gid [Rhodopseudomonas palustris CGA009] gi|50400230|sp|Q6N5Z1|TRMFO_RHOPA RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|39649748|emb|CAE28269.1| putative glucose-inhibited division protein (gid) [Rhodopseudomonas palustris CGA009] Length = 478 Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 1/73 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T L Q + RTIPGLE R G ++N PK L +L + L AG Sbjct: 296 GFQTKLKHGAQLRVFRTIPGLENAEFARLGGLHRNTFLNSPKLLDESLRLRASPRLRFAG 355 Query: 368 QINGTTGYEEAAA 380 Q+ G GY E+A+ Sbjct: 356 QMTGCEGYVESAS 368 >gi|313639411|gb|EFS04280.1| NADH oxidase [Listeria seeligeri FSL S4-171] Length = 589 Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust. Identities = 20/41 (48%), Positives = 26/41 (63%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIG 42 + R +V+VIGGG AG EAA AA++G +T LI T G Sbjct: 305 VTRPTNVVVIGGGTAGLEAACTAAEVGCNTTLIEANEQTGG 345 >gi|325106983|ref|YP_004268051.1| glucose-inhibited division protein A [Planctomyces brasiliensis DSM 5305] gi|324967251|gb|ADY58029.1| glucose-inhibited division protein A [Planctomyces brasiliensis DSM 5305] Length = 753 Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 3/72 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR-EIDA 64 YD++V+GGG+AG +A AA++G ALI ++ G+ S + + GH+ R E Sbjct: 190 YDLVVVGGGYAGMGSAIAAARMGIRVALIQNRPVLGGNGSSEVRVWAM--GHIRRGEYPH 247 Query: 65 LDGLMGRVADAA 76 + ++ AD+A Sbjct: 248 IGEIVAEFADSA 259 >gi|169836599|ref|ZP_02869787.1| hypothetical protein cdivTM_05765 [candidate division TM7 single-cell isolate TM7a] Length = 33 Score = 40.0 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 17/25 (68%), Positives = 21/25 (84%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLG 28 R+YDVIV+G GHAG EAA +A+LG Sbjct: 2 RNYDVIVVGAGHAGNEAALASARLG 26 >gi|163731891|ref|ZP_02139338.1| tRNA (uracil-5-)-methyltransferase Gid [Roseobacter litoralis Och 149] gi|161395345|gb|EDQ19667.1| tRNA (uracil-5-)-methyltransferase Gid [Roseobacter litoralis Och 149] Length = 450 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q ++IPGL+ + R G ++N P L + + + AG Sbjct: 286 GFQTKMKYGAQASVFKSIPGLKNASFARLGGIHRNTFLNAPTLLDAQMRLRSRPNIRFAG 345 Query: 368 QINGTTGYEEAAAQGLVAG 386 QI G GY E+A+ GL+AG Sbjct: 346 QITGVEGYVESASMGLLAG 364 >gi|312879575|ref|ZP_07739375.1| gid protein [Aminomonas paucivorans DSM 12260] gi|310782866|gb|EFQ23264.1| gid protein [Aminomonas paucivorans DSM 12260] Length = 440 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 1/75 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYI-NPKELFPTLETKKISGLFLAG 367 G T L Q + R IP LE+ +R G ++ P+ L L + LFLAG Sbjct: 277 GFQTNLLWGEQDRIFRLIPALERAEFVRKGVMHRNLFVCAPRVLDGFLRPRGREDLFLAG 336 Query: 368 QINGTTGYEEAAAQG 382 Q+ G GY E+ A G Sbjct: 337 QVTGVEGYLESTAMG 351 >gi|161523106|ref|YP_001586035.1| YD repeat-containing protein [Burkholderia multivorans ATCC 17616] gi|189348071|ref|YP_001941267.1| Rhs family protein [Burkholderia multivorans ATCC 17616] gi|160346659|gb|ABX19743.1| YD repeat protein [Burkholderia multivorans ATCC 17616] gi|189338209|dbj|BAG47277.1| Rhs family protein [Burkholderia multivorans ATCC 17616] Length = 1410 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 10/114 (8%) Query: 164 IGKLKIP---AGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARL--DGKTIIWDKTEKQF 218 I +++ P AG+ D + +N+F +D D GR P L G + +Q+ Sbjct: 1221 IARIEQPLRYAGQYADEGTGLHYNTFRFYDPDVGRFINQDPIGLYGGGNLYAYGPNSQQW 1280 Query: 219 ADERLIPFSFMTDKITNRQIECGITR-TNLETHRIIMENIKHSAIYSGDIKSYG 271 D P+ + + K++N + G+TR N H I+ + K +A + YG Sbjct: 1281 VD----PWGWCSVKLSNNMEKSGVTRPANSAAHHIVGDTAKEAAPARAILSKYG 1330 >gi|237740651|ref|ZP_04571132.1| tRNA (uracil-5-)-methyltransferase Gid [Fusobacterium sp. 2_1_31] gi|229422668|gb|EEO37715.1| tRNA (uracil-5-)-methyltransferase Gid [Fusobacterium sp. 2_1_31] Length = 434 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 37/87 (42%), Gaps = 1/87 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK-KISGLFLAG 367 G T L Q + IPGLE +R G +IN +L ++ AG Sbjct: 279 GFQTNLKFGEQKRVFSMIPGLENAEFVRYGVMHRNTFINSTKLLDKTLKLKNKDNVYFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSN 394 QI G GY A A G+ A IN A + N Sbjct: 339 QITGGEGYVTAIATGMYAAINVANRLN 365 >gi|188590356|ref|YP_001920065.1| NADH oxidase [Clostridium botulinum E3 str. Alaska E43] gi|188500637|gb|ACD53773.1| NADH oxidase [Clostridium botulinum E3 str. Alaska E43] Length = 662 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 18/37 (48%), Positives = 26/37 (70%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKT 38 + + +V+VIGGG AG EAA AA++G +T LI K+ Sbjct: 380 VKKQTNVVVIGGGTAGLEAACTAAEVGCTTFLIEQKS 416 >gi|257358089|gb|ACV53113.1| QuiP [Pseudomonas aeruginosa] Length = 486 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 41/156 (26%), Positives = 67/156 (42%), Gaps = 17/156 (10%) Query: 262 IYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYP---NGISTALPEEI 318 +Y+ + +Y RY + + + G R + +PE ++ +V+ G++ L EEI Sbjct: 144 VYARGVNAYLYRYRDKLPMDLAQSGYRPE---YWKPE--DSALVFALLNFGLAVNLQEEI 198 Query: 319 QHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEA 378 + G +K+ + P Y P E P E +K+ GL L GQ+ G G E A Sbjct: 199 ASLTLAQKVGSDKLAWLTPTY--------PDENLPFDEAEKLKGLRLDGQVPGLAGVEGA 250 Query: 379 AAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDD 414 A Q + SN I R+ S +M +D Sbjct: 251 ARQVAALSMLGVAASNNW-AIALQRSRSGKSLMAND 285 >gi|218887720|ref|YP_002437041.1| FAD dependent oxidoreductase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758674|gb|ACL09573.1| FAD dependent oxidoreductase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 463 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 17/101 (16%) Query: 294 FLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKEL-- 351 ++EP N V P I+ ALPE I + GLE++N + PG A E + E+ Sbjct: 361 YIEPTMTN---VVPGDIAMALPERIVTNLVE---GLEQLNNVMPGIANEETLLYAPEIKF 414 Query: 352 FPT-------LETKKISGLFLAGQINGTTG-YEEAAAQGLV 384 F T LET + GLF+AG G G AAA GL+ Sbjct: 415 FATQVETDNRLET-SLKGLFVAGDGPGVAGNIVSAAATGLI 454 >gi|50287255|ref|XP_446057.1| hypothetical protein [Candida glabrata CBS 138] gi|49525364|emb|CAG58981.1| unnamed protein product [Candida glabrata] Length = 493 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 3/66 (4%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGS---MSCNPAIGGLGKGHL 58 I + +D+++IGGG G AA AA+LG TA I + S G+ + C P+ L HL Sbjct: 19 IKKQHDLVIIGGGPGGYVAAIKAAQLGLDTACIEKRGSLGGTCLNVGCIPSKALLNNSHL 78 Query: 59 VREIDA 64 +I + Sbjct: 79 YHQIKS 84 >gi|294782270|ref|ZP_06747596.1| tRNA:M(5)U-54 methyltransferase [Fusobacterium sp. 1_1_41FAA] gi|294480911|gb|EFG28686.1| tRNA:M(5)U-54 methyltransferase [Fusobacterium sp. 1_1_41FAA] Length = 434 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 37/87 (42%), Gaps = 1/87 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK-KISGLFLAG 367 G T L Q + IPGLE +R G +IN +L ++ AG Sbjct: 279 GFQTNLKFGEQKRVFSMIPGLENAEFVRYGVMHRNTFINSTKLLDKTLKLKNKDNVYFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSN 394 QI G GY A A G+ A IN A + N Sbjct: 339 QITGGEGYVTAIATGMYAAINVANRLN 365 >gi|225026412|ref|ZP_03715604.1| hypothetical protein EUBHAL_00661 [Eubacterium hallii DSM 3353] gi|224956249|gb|EEG37458.1| hypothetical protein EUBHAL_00661 [Eubacterium hallii DSM 3353] Length = 667 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 27/36 (75%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHK 37 +N++ +V+VIGGG AG EAA AA++G +T L+ K Sbjct: 381 VNKNCNVVVIGGGTAGLEAACSAAEVGCTTFLLEKK 416 >gi|153813600|ref|ZP_01966268.1| hypothetical protein RUMOBE_04023 [Ruminococcus obeum ATCC 29174] gi|149830298|gb|EDM85391.1| hypothetical protein RUMOBE_04023 [Ruminococcus obeum ATCC 29174] Length = 500 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 6/76 (7%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIV+GGG AG AA + KLGA T LI K +G + +G + H E + Sbjct: 5 YDVIVVGGGPAGIMAAMASGKLGADTLLI-EKNGFLGGAATASVLGPISPFHYKDE-QVI 62 Query: 66 DGL----MGRVADAAG 77 +G+ M R+ AG Sbjct: 63 NGIPQDFMDRMVKEAG 78 >gi|149174678|ref|ZP_01853303.1| hypothetical protein PM8797T_26120 [Planctomyces maris DSM 8797] gi|148846372|gb|EDL60710.1| hypothetical protein PM8797T_26120 [Planctomyces maris DSM 8797] Length = 765 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 10/51 (19%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLG 54 + YD++V+GGG++G AA AA++G S ALI + P +GG G Sbjct: 194 KKYDLVVVGGGYSGMGAAISAARMGCSVALIQDR----------PVLGGNG 234 >gi|255527095|ref|ZP_05393983.1| FAD dependent oxidoreductase [Clostridium carboxidivorans P7] gi|296187883|ref|ZP_06856276.1| FAD dependent oxidoreductase [Clostridium carboxidivorans P7] gi|255509197|gb|EET85549.1| FAD dependent oxidoreductase [Clostridium carboxidivorans P7] gi|296047504|gb|EFG86945.1| FAD dependent oxidoreductase [Clostridium carboxidivorans P7] Length = 463 Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust. Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 5/81 (6%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHK---TSTIGSMSCNPAIGGL-GKGHLVRE 61 YDV+++GGG GC AA +K + ALI + ++C+ G G+ L+ + Sbjct: 3 YDVLILGGGIVGCAAAYELSKYNLNIALIEKDYDIADDVALINCSVVYDGCEGEDTLISK 62 Query: 62 IDAL-DGLMGRVADAAGIQFR 81 + + + ++G+V+D + F Sbjct: 63 LQVMGNDIVGKVSDKFNVDFE 83 >gi|154490786|ref|ZP_02030727.1| hypothetical protein PARMER_00703 [Parabacteroides merdae ATCC 43184] gi|154088851|gb|EDN87895.1| hypothetical protein PARMER_00703 [Parabacteroides merdae ATCC 43184] Length = 635 Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust. Identities = 19/46 (41%), Positives = 28/46 (60%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIG 51 +D++V+GGG AGC A AA+LG ALI ++ G+ S +G Sbjct: 184 FDLVVVGGGIAGCCTALSAARLGCKVALIQNRPVLGGNNSSEVRVG 229 >gi|296242118|ref|YP_003649605.1| 2,3-di-O-geranylgeranylglyceryl phosphate reductase [Thermosphaera aggregans DSM 11486] gi|296094702|gb|ADG90653.1| 2,3-di-O-geranylgeranylglyceryl phosphate reductase [Thermosphaera aggregans DSM 11486] Length = 456 Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust. Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 1/47 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTS-TIGSMSCNPAIG 51 YDV+++G G AG E+A V A G A++ K + IG +C AIG Sbjct: 3 YDVVIVGAGVAGLESAIVLASKGFKVAVVESKPAEKIGDKTCGDAIG 49 >gi|107100476|ref|ZP_01364394.1| hypothetical protein PaerPA_01001501 [Pseudomonas aeruginosa PACS2] Length = 847 Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust. Identities = 41/156 (26%), Positives = 68/156 (43%), Gaps = 17/156 (10%) Query: 262 IYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYP---NGISTALPEEI 318 +Y+ + +Y RY + + + G R + +PE ++ +V+ G++ L EEI Sbjct: 144 VYARGVNAYLYRYRDKLPMDLAQSGYR---PEYWKPE--DSALVFALLNFGLAVNLQEEI 198 Query: 319 QHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEA 378 + G +K+ + P Y P E P E +K+ GL L GQ+ G G E+A Sbjct: 199 ASLTLAQKVGSDKLAWLTPTY--------PDENLPFDEAEKLKGLRLDGQVPGLAGVEDA 250 Query: 379 AAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDD 414 A Q + SN I R+ S +M +D Sbjct: 251 ARQVAALSMLGVAASNNW-AIAPQRSRSGKSLMAND 285 >gi|70933619|ref|XP_738157.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56514141|emb|CAH84030.1| hypothetical protein PC300822.00.0 [Plasmodium chabaudi chabaudi] Length = 53 Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust. Identities = 22/49 (44%), Positives = 31/49 (63%) Query: 571 SSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 ++ P LSNE EKL+ +P NL +A+KIEG+T + + L YI K K Sbjct: 2 NNFPYLSNEEIEKLNKFRPSNLDEANKIEGVTMSGIYYLYHYIMKEKKK 50 >gi|257051964|ref|YP_003129797.1| geranylgeranyl reductase [Halorhabdus utahensis DSM 12940] gi|256690727|gb|ACV11064.1| geranylgeranyl reductase [Halorhabdus utahensis DSM 12940] Length = 455 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKT-STIGSMSCNPAIGG 52 M YD +V+G G +GC AAA A+ G ++ K+ S G ++C A+ G Sbjct: 1 MTTAEYDAVVVGAGVSGCYAAATMAEEGLDVVIVERKSESEAGHIACGDALKG 53 >gi|224093480|ref|XP_002309926.1| predicted protein [Populus trichocarpa] gi|222852829|gb|EEE90376.1| predicted protein [Populus trichocarpa] Length = 158 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 2/50 (4%) Query: 562 RLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLI 611 R +P D DY ++ LS E EKLS KP + QAS+ G++PA + +LLI Sbjct: 92 RPLPGDLDYYAMTTLSLEALEKLS--KPQTIGQASRECGVSPADITVLLI 139 >gi|94987527|ref|YP_595460.1| anaerobic glycerol-3-phosphate dehydrogenase subunit B [Lawsonia intracellularis PHE/MN1-00] gi|94731776|emb|CAJ55139.1| anaerobic glycerol-3-phosphate dehydrogenase, subunit B [Lawsonia intracellularis PHE/MN1-00] Length = 417 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 23/44 (52%), Positives = 29/44 (65%), Gaps = 2/44 (4%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALIT--HKTSTIGS 43 +NR D+IV+GGG +G AAA AA+ G LIT + T TIGS Sbjct: 1 MNRKVDLIVVGGGLSGMTAAAFAARKGKKCILITKGNGTITIGS 44 >gi|160914669|ref|ZP_02076883.1| hypothetical protein EUBDOL_00676 [Eubacterium dolichum DSM 3991] gi|158433209|gb|EDP11498.1| hypothetical protein EUBDOL_00676 [Eubacterium dolichum DSM 3991] Length = 421 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 32/61 (52%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + + YDVIVIGGG AG +A A++ GA+ L+ + +G + G G H E Sbjct: 1 MKQQYDVIVIGGGPAGLASAIAASEHGANKVLVIERDKELGGILNQCIHNGFGLHHFKEE 60 Query: 62 I 62 + Sbjct: 61 L 61 >gi|313634786|gb|EFS01219.1| NADH oxidase [Listeria seeligeri FSL N1-067] Length = 664 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 19/41 (46%), Positives = 26/41 (63%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIG 42 + R +++VIGGG AG EAA AA++G +T LI T G Sbjct: 380 VTRPTNIVVIGGGTAGLEAACTAAEVGCNTTLIEANEQTGG 420 >gi|289433771|ref|YP_003463643.1| NADH:flavin oxidoreductase, putative [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170015|emb|CBH26555.1| NADH:flavin oxidoreductase, putative [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 664 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 19/41 (46%), Positives = 26/41 (63%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIG 42 + R +++VIGGG AG EAA AA++G +T LI T G Sbjct: 380 VTRPTNIVVIGGGTAGLEAACTAAEVGCNTTLIEANEQTGG 420 >gi|260426874|ref|ZP_05780853.1| tRNA:M(5)U-54 methyltransferase [Citreicella sp. SE45] gi|260421366|gb|EEX14617.1| tRNA:M(5)U-54 methyltransferase [Citreicella sp. SE45] Length = 450 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 1/79 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q + R IPGL+ + R G ++N P L + + + AG Sbjct: 286 GFQTKMKYGAQTEVFRMIPGLQNASFARLGGIHRNTFLNSPTLLDNQMRLRSKPHIRFAG 345 Query: 368 QINGTTGYEEAAAQGLVAG 386 QI G GY E+ A GL AG Sbjct: 346 QITGVEGYVESCAMGLAAG 364 >gi|242280448|ref|YP_002992577.1| FAD dependent oxidoreductase [Desulfovibrio salexigens DSM 2638] gi|242123342|gb|ACS81038.1| FAD dependent oxidoreductase [Desulfovibrio salexigens DSM 2638] Length = 468 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 40/112 (35%), Positives = 53/112 (47%), Gaps = 17/112 (15%) Query: 294 FLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKEL-- 351 F+EP N V I+ ALPE I I GLEK+N + PG A E + E+ Sbjct: 364 FVEPTMKN---VTCGDIAMALPERIVRNLIE---GLEKLNDVVPGVANEETLLYAPEIKF 417 Query: 352 FPT-------LETKKISGLFLAGQINGTTG-YEEAAAQGLVAGINSARKSNK 395 F T LET + GLF+AG G G A+A G++ AR++ K Sbjct: 418 FSTQVETSDQLET-ALEGLFVAGDGPGVAGNIVSASATGIIPAKEIARRAKK 468 >gi|163744287|ref|ZP_02151647.1| dihydrolipoamide dehydrogenase [Oceanibulbus indolifex HEL-45] gi|161381105|gb|EDQ05514.1| dihydrolipoamide dehydrogenase [Oceanibulbus indolifex HEL-45] Length = 462 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 3/80 (3%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGS---MSCNPAIGGLGKGHLVRE 61 SYDVIVIG G G AA A+LG TA + + + G+ + C P+ L H++ E Sbjct: 3 SYDVIVIGSGPGGYVAAIRCAQLGLKTACVEGRETLGGTCLNVGCIPSKALLHATHMLHE 62 Query: 62 IDALDGLMGRVADAAGIQFR 81 + G MG DA + ++ Sbjct: 63 AEHNFGEMGLKGDAPSVDWK 82 >gi|110004175|emb|CAK98513.1| probable gid protein c-terminal truncated [Spiroplasma citri] Length = 340 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 51/130 (39%), Gaps = 25/130 (19%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALITHKT---------STIGSMSCNPAIGGLGK-- 55 ++ VIG G AGCE A AKLG L KT T + C+ + + K Sbjct: 5 EINVIGAGLAGCEIAYQLAKLGLKVKLYEAKTLFKNPVQKLDTFAELVCSNSFRSVSKEN 64 Query: 56 --GHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILS 113 G L E+ LD L+ + A I DREL+ + +++ Sbjct: 65 AIGILKEELKLLDSLILKTAYDVQI------------TADDALSVDRELFSQKVTATLIN 112 Query: 114 QENLDVIQGE 123 N+++I E Sbjct: 113 HPNINIIYDE 122 >gi|168334799|ref|ZP_02692925.1| fumarate reductase/succinate dehydrogenase flavoprotein-like [Epulopiscium sp. 'N.t. morphotype B'] Length = 584 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 7/59 (11%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMS-------CNPAIGG 52 MIN+ +DV V+GGG +G AA AA+ G S ALI + G+ S C + GG Sbjct: 1 MINKKFDVAVVGGGLSGICAAIAAARGGVSVALIQDRPVLGGNASSEIRMHICGASRGG 59 >gi|103488160|ref|YP_617721.1| mercuric reductase MerA [Sphingopyxis alaskensis RB2256] gi|98978237|gb|ABF54388.1| Mercuric reductase MerA [Sphingopyxis alaskensis RB2256] Length = 475 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 27/62 (43%), Positives = 34/62 (54%), Gaps = 4/62 (6%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YD+ VIG G AG AA AA GA+ ALI H TIG N +G + ++R +AL Sbjct: 14 YDLAVIGAGSAGFSAAITAADQGANVALIGH--GTIGGTCVN--VGCVPSKTMIRAAEAL 69 Query: 66 DG 67 G Sbjct: 70 HG 71 >gi|289582429|ref|YP_003480895.1| geranylgeranyl reductase [Natrialba magadii ATCC 43099] gi|289531982|gb|ADD06333.1| geranylgeranyl reductase [Natrialba magadii ATCC 43099] Length = 471 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKT-STIGSMSCNPAIGG 52 RS DV+V+G G +GC AAA A+ G ++ KT G ++C A+ G Sbjct: 18 RSPDVVVVGAGTSGCYAAATIAQAGYEVVVLERKTEEEAGHIACGDALKG 67 >gi|5669530|gb|AAD46374.1|AF162663_1 glucose-inhibited division protein [Myxococcus xanthus DK 1622] Length = 457 Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust. Identities = 38/125 (30%), Positives = 56/125 (44%), Gaps = 12/125 (9%) Query: 269 SYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPN----GISTALPEEIQHQ-FI 323 +YGP + D R GH+ + + L DV + G T L Q + F Sbjct: 244 AYGPMKPVGLRDP------RTGHEPYAVVQLLMEDVGGTSWNMVGFQTRLTWGEQKRIFS 297 Query: 324 RTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQG 382 IPGL++ +R G +I+ P+ L L K L+ AGQI+G GY E+AA G Sbjct: 298 SFIPGLQQAEFLRMGQMHRNTFIDSPRLLAKDLSLKTEPRLYFAGQISGVEGYVESAACG 357 Query: 383 LVAGI 387 + + Sbjct: 358 YLVAL 362 >gi|84686896|ref|ZP_01014780.1| gid protein [Maritimibacter alkaliphilus HTCC2654] gi|84665093|gb|EAQ11573.1| gid protein [Rhodobacterales bacterium HTCC2654] Length = 450 Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 1/78 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q + + IPGLE + R G ++N P L + + + AG Sbjct: 286 GFQTKMKYGAQTEVFKMIPGLENASFARLGGIHRNTFMNSPTLLDEQMRLRTRPNVRFAG 345 Query: 368 QINGTTGYEEAAAQGLVA 385 Q+ G GY E+AA GL+A Sbjct: 346 QVTGVEGYVESAAMGLLA 363 >gi|328862900|gb|EGG12000.1| hypothetical protein MELLADRAFT_89168 [Melampsora larici-populina 98AG31] Length = 188 Score = 39.7 bits (91), Expect = 1.6, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 60/140 (42%), Gaps = 33/140 (23%) Query: 234 TNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQI 293 T Q+ C +T I+ ++ + +++ PS+E ++++F +++ H + Sbjct: 55 TTNQLFCWKAHAETQTRDIVRNDLDKAVHIHEEVQGQ-----PSLESEVIKFSDQDSHMV 109 Query: 294 FLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFP 353 +LEP L+T V N +P Y +EY++++PK+L Sbjct: 110 WLEPR-LHTKAVEMN---------------------------QPSYEVEYNHVDPKDLTT 141 Query: 354 TLETKKISGLFLAGQINGTT 373 ++ + + L G + TT Sbjct: 142 GIKFRAAASLKSTGCEDLTT 161 >gi|152995745|ref|YP_001340580.1| soluble pyridine nucleotide transhydrogenase [Marinomonas sp. MWYL1] gi|189046863|sp|A6VW16|STHA_MARMS RecName: Full=Soluble pyridine nucleotide transhydrogenase; Short=STH; AltName: Full=NAD(P)(+) transhydrogenase [B-specific] gi|150836669|gb|ABR70645.1| pyridine nucleotide-disulphide oxidoreductase dimerisation region [Marinomonas sp. MWYL1] Length = 464 Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust. Identities = 26/66 (39%), Positives = 33/66 (50%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M R YDV+V+G G AG AA AAK G A+I + GS + I H V+ Sbjct: 1 MTTRHYDVVVLGTGPAGEGAAMSAAKAGKRVAVIEASSQVGGSCTHLGTIPSKALRHAVK 60 Query: 61 EIDALD 66 EI A + Sbjct: 61 EIIAFN 66 >gi|260170776|ref|ZP_05757188.1| hypothetical protein BacD2_02842 [Bacteroides sp. D2] gi|315919111|ref|ZP_07915351.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313692986|gb|EFS29821.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 624 Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust. Identities = 40/184 (21%), Positives = 80/184 (43%), Gaps = 34/184 (18%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLG-------- 54 + S DV++IGGG +G A +A++GA T LI +T +G M + + + Sbjct: 23 DDSVDVLIIGGGASGVTAGIQSARMGAET-LIVEETEWLGGMLTSAGVSAVDGNYDLPAG 81 Query: 55 -----KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRL-AMQ 108 +GHL LD L + +G+ F P+V ++ + + ++ Sbjct: 82 LFGEFRGHLADYYGGLDSL--KTGWVSGVLFE-------PSV------GNKIFHEMVGVE 126 Query: 109 REILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLK 168 + + N +++ E + + I+ I M+D+++ + +L GT L + + +K Sbjct: 127 KNLKVWHNATLVKLE----RKDDSWIAQIQMKDHTIKKVCAKILIDGTELGDIAKMCGVK 182 Query: 169 IPAG 172 G Sbjct: 183 YDIG 186 >gi|15920768|ref|NP_376437.1| hypothetical protein ST0549 [Sulfolobus tokodaii str. 7] gi|15621551|dbj|BAB65546.1| 517aa long conserved hypothetical protein [Sulfolobus tokodaii str. 7] Length = 517 Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust. Identities = 18/42 (42%), Positives = 25/42 (59%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGS 43 +NR YDV++IGGGH G AA+ AK G A+ + G+ Sbjct: 1 MNRIYDVVIIGGGHNGLVAASYLAKEGLKVAVFERRNVIGGA 42 >gi|242015071|ref|XP_002428198.1| thioredoxin reductase, putative [Pediculus humanus corporis] gi|212512750|gb|EEB15460.1| thioredoxin reductase, putative [Pediculus humanus corporis] Length = 490 Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust. Identities = 41/165 (24%), Positives = 69/165 (41%), Gaps = 21/165 (12%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 I +D+IVIGGG G A A+ LGAS LI + T + + + G + ++ Sbjct: 4 IEDKFDLIVIGGGSGGLACAKQASTLGASVCLIDYVTPSPKGNTWGMGGTCVNVGCIPKK 63 Query: 62 IDALDGLMGR-VADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQ----------RE 110 + L+G + DAA + + ++ K + D E + A+Q R Sbjct: 64 LMHQAALLGEAIQDAAAYGWVINDLDK--------VKIDWERLKQAIQNHIKSVNWVTRV 115 Query: 111 ILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTG 155 IL + ++ I G G +KN I D+ I +++ G Sbjct: 116 ILKENKIEYING--IGKFIDKNTIEVTTKTDSKNIYGKNILIAVG 158 >gi|239636101|ref|ZP_04677115.1| dihydrolipoyl dehydrogenase [Staphylococcus warneri L37603] gi|239598372|gb|EEQ80855.1| dihydrolipoyl dehydrogenase [Staphylococcus warneri L37603] Length = 450 Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust. Identities = 45/157 (28%), Positives = 68/157 (43%), Gaps = 25/157 (15%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALI--THKTSTIGSMSCNPAIGGLGKGHLVREI 62 +YD++VIG G G AA AA+LG S A+I H T ++ C P+ L G V +I Sbjct: 4 NYDLVVIGAGPGGYVAAIRAAQLGKSVAIIEKQHVGGTCLNVGCIPSKTLLEFGSQVHQI 63 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 A + L GI LN+ P + + L Q +L + N+++IQG Sbjct: 64 HAANDL--------GITTGHLNIDY-PRLFEHKNNIVHTLTNGVTQ--LLKKNNVELIQG 112 Query: 123 EVA---GFNTEKNIISSIVMQDNSMIRCSTVVLTTGT 156 E G E N ++ ++L TG+ Sbjct: 113 EAVVKDGLTIEMN---------QQSLKARDIILATGS 140 >gi|238893052|ref|YP_002917786.1| NADH:flavin oxidoreductase [Klebsiella pneumoniae NTUH-K2044] gi|238545368|dbj|BAH61719.1| NADH:flavin oxidoreductase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 677 Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust. Identities = 20/44 (45%), Positives = 26/44 (59%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMS 45 +NR +V+VIG G AG EAA AA++G T L+ K G S Sbjct: 380 VNRDTNVVVIGAGTAGMEAACTAAEVGCHTWLLEAKNHVGGLAS 423 >gi|152968657|ref|YP_001333766.1| 2,4-dieonyl-CoA reductase, FMN-linked [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150953506|gb|ABR75536.1| 2,4-dieonyl-CoA reductase, FMN-linked [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 677 Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust. Identities = 20/44 (45%), Positives = 26/44 (59%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMS 45 +NR +V+VIG G AG EAA AA++G T L+ K G S Sbjct: 380 VNRDTNVVVIGAGTAGMEAACTAAEVGCHTWLLEAKNHVGGLAS 423 >gi|330012029|ref|ZP_08307246.1| putative NADH oxidase [Klebsiella sp. MS 92-3] gi|328534018|gb|EGF60670.1| putative NADH oxidase [Klebsiella sp. MS 92-3] Length = 677 Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust. Identities = 20/44 (45%), Positives = 26/44 (59%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMS 45 +NR +V+VIG G AG EAA AA++G T L+ K G S Sbjct: 380 VNRDTNVVVIGAGTAGMEAACTAAEVGCHTWLLEAKNHVGGLAS 423 >gi|302389710|ref|YP_003825531.1| glucose-inhibited division protein A [Thermosediminibacter oceani DSM 16646] gi|302200338|gb|ADL07908.1| glucose-inhibited division protein A [Thermosediminibacter oceani DSM 16646] Length = 432 Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 8/87 (9%) Query: 323 IRTIPGLEKVNIIRP-----GYAIEYDYINPKELFPTLETKKISGLFLAGQING-TTGYE 376 +R I G E P G +I Y + P++ F ++ + + LF AG+ +G G+ Sbjct: 275 LRKIKGFENARFEDPYAASKGNSIRYMSMAPRDDF--MKVQGVENLFCAGEKSGPVVGHT 332 Query: 377 EAAAQGLVAGINSARKSNKLDCICFSR 403 EA G++AG N+ RK+ K++ + R Sbjct: 333 EAICTGILAGHNAVRKALKIEMLKLPR 359 >gi|94494359|gb|ABF29526.1| mercuric reductase [Anoxybacillus sp. HT14] Length = 451 Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust. Identities = 40/123 (32%), Positives = 55/123 (44%), Gaps = 18/123 (14%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR--EID 63 YD IVIG G A +A A K GA A++ + T+G N IG + L+R EI+ Sbjct: 42 YDYIVIGSGGAAFSSAIEAVKYGAKVAMV--ERGTVGGTCVN--IGCVPSKTLLRAGEIN 97 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELY---RLAMQREILSQENLDVI 120 AL A F L+ GP P + EL R A +++++ D I Sbjct: 98 AL---------ARNHPFFGLHTSAGPVDLAPLVKQKNELVGQLRQAKYADLIAEYGFDFI 148 Query: 121 QGE 123 QGE Sbjct: 149 QGE 151 >gi|87307844|ref|ZP_01089987.1| putative secreted protein [Blastopirellula marina DSM 3645] gi|87289458|gb|EAQ81349.1| putative secreted protein [Blastopirellula marina DSM 3645] Length = 672 Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust. Identities = 15/47 (31%), Positives = 29/47 (61%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGL 53 D++V+GG +GC AA AA++G ++ + T+ +G + A+G + Sbjct: 38 DLLVVGGAESGCAAAVQAARMGVKRIVLVNDTNWVGGQFSSEALGAI 84 >gi|262044887|ref|ZP_06017929.1| NADH:flavin oxidoreductase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259037614|gb|EEW38843.1| NADH:flavin oxidoreductase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 669 Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust. Identities = 20/44 (45%), Positives = 26/44 (59%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMS 45 +NR +V+VIG G AG EAA AA++G T L+ K G S Sbjct: 380 VNRDTNVVVIGAGTAGMEAACTAAEVGCHTWLLEAKNHVGGLAS 423 >gi|116618055|ref|YP_818426.1| glutathione reductase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096902|gb|ABJ62053.1| Glutathione reductase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 446 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 33/141 (23%), Positives = 52/141 (36%), Gaps = 20/141 (14%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHK--TSTIGSMSCNPAIGGLGKGHLVREI 62 +YDVI IG GHA A A+ G AL+ T + CN I G ++ + Sbjct: 2 NYDVIFIGSGHAAWHGAQTLARSGKKVALVEENKVAGTCTNFGCNAKILLDGPAEMMHHL 61 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQ---REILSQENLDV 119 + G + + P + P A + + +LS + +D+ Sbjct: 62 NHYHG---------------IGINDTPNIIWPELMAYKHQVIDPLSGGLAHMLSVDGIDI 106 Query: 120 IQGEVAGFNTEKNIISSIVMQ 140 I G N EK ++ V Q Sbjct: 107 INGHAKFLNNEKIVVVDQVYQ 127 >gi|302336782|ref|YP_003801988.1| FAD dependent oxidoreductase [Spirochaeta smaragdinae DSM 11293] gi|301633967|gb|ADK79394.1| FAD dependent oxidoreductase [Spirochaeta smaragdinae DSM 11293] Length = 644 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 26/52 (50%), Positives = 30/52 (57%), Gaps = 6/52 (11%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHL 58 DV+VIGGG +GC AA AAK GA AL+ K +TI S GG G H Sbjct: 21 DVLVIGGGISGCMAAISAAKQGAKVALL-EKGATIRS-----GAGGSGCDHW 66 >gi|309775586|ref|ZP_07670586.1| NADH:flavin oxidoreductase [Erysipelotrichaceae bacterium 3_1_53] gi|308916680|gb|EFP62420.1| NADH:flavin oxidoreductase [Erysipelotrichaceae bacterium 3_1_53] Length = 664 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMS 45 + + +V+VIGGG AG EAA AA++G +T LI K +G +S Sbjct: 379 VKKPCNVVVIGGGTAGLEAACTAAEVGCTTFLI-EKEDHVGGLS 421 >gi|172058886|ref|YP_001815346.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Exiguobacterium sibiricum 255-15] gi|171991407|gb|ACB62329.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Exiguobacterium sibiricum 255-15] Length = 475 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 23/49 (46%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGS---MSCNPA 49 +SY ++VIGGG AG AA AA LGA ALI T G C P+ Sbjct: 2 KSYQLVVIGGGAAGMTIAAGAASLGAHVALIEKHTHLGGDCLHYGCVPS 50 >gi|284164659|ref|YP_003402938.1| geranylgeranyl reductase [Haloterrigena turkmenica DSM 5511] gi|284014314|gb|ADB60265.1| geranylgeranyl reductase [Haloterrigena turkmenica DSM 5511] Length = 467 Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKT-STIGSMSCNPAIGG 52 S DV+V+G G AGC AAA A+ G ++ KT G ++C A+ G Sbjct: 16 SPDVVVVGAGTAGCYAAATVAREGYDVVVLERKTEDEAGHIACGDALKG 64 >gi|255036366|ref|YP_003086987.1| putative pyridine nucleotide-disulfide oxidoreductase [Dyadobacter fermentans DSM 18053] gi|254949122|gb|ACT93822.1| putative pyridine nucleotide-disulphide oxidoreductase [Dyadobacter fermentans DSM 18053] Length = 600 Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust. Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 9/70 (12%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGK---------G 56 YD++V+GGG AG AA AA++G + ALI + G+ S + +G G Sbjct: 184 YDLVVVGGGIAGTCAAISAARMGLTVALIQDRPVLGGNNSSEVRVHLMGDVDKNHYPKLG 243 Query: 57 HLVREIDALD 66 +VRE+D D Sbjct: 244 RIVREMDNGD 253 >gi|149193834|ref|ZP_01870932.1| fumarate reductase flavoprotein subunit [Caminibacter mediatlanticus TB-2] gi|149135787|gb|EDM24265.1| fumarate reductase flavoprotein subunit [Caminibacter mediatlanticus TB-2] Length = 520 Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust. Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 7/79 (8%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKT-----STIGSMSCNPAIGGLGKGHLV 59 SYD++V+G G AG AA A +LG++ A++ K+ S + N A+ +G G + Sbjct: 2 SYDILVVGSGIAGMMAAIEAKELGSNVAIVMKKSPLANNSFMAKGGINAALNNMGDGDSI 61 Query: 60 REI--DALDGLMGRVADAA 76 + D L G MG + A Sbjct: 62 EQHIQDTLKGGMGIAEEEA 80 >gi|108763266|ref|YP_631216.1| tRNA (uracil-5-)-methyltransferase Gid [Myxococcus xanthus DK 1622] gi|115311598|sp|Q9S449|TRMFO_MYXXD RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|27804885|gb|AAO22919.1| GidA-like protein [Myxococcus xanthus] gi|108467146|gb|ABF92331.1| gid protein [Myxococcus xanthus DK 1622] Length = 457 Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust. Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 322 FIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAA 380 F IPGL++ +R G +I+ P+ L L K L+ AGQI+G GY E+AA Sbjct: 296 FSSFIPGLQQAEFLRMGQIHRNTFIDSPRLLAKDLSLKTEPRLYFAGQISGVEGYVESAA 355 Query: 381 QGLVAGI 387 G + + Sbjct: 356 CGYLVAL 362 >gi|153006782|ref|YP_001381107.1| soluble pyridine nucleotide transhydrogenase [Anaeromyxobacter sp. Fw109-5] gi|152030355|gb|ABS28123.1| pyridine nucleotide-disulphide oxidoreductase dimerisation region [Anaeromyxobacter sp. Fw109-5] Length = 481 Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust. Identities = 48/152 (31%), Positives = 67/152 (44%), Gaps = 10/152 (6%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV+VIG G AG A AA G ALI K + G S N G +RE AL Sbjct: 4 YDVVVIGSGPAGENGAIQAAFTGKKVALI-EKEAVPGGASANT---GTIPSKALRET-AL 58 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQAD-RELYRLAMQREILSQENLDVIQGEV 124 L R DA GI+ R+ P + G + RE R+ R+ L++ ++ +G + Sbjct: 59 AILQARSRDAHGIELRISGTVTIPELMGRKGLVTAREHSRI---RDALNRAGVEQFRG-I 114 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGT 156 A F I SI ++ ++L GT Sbjct: 115 ASFVDPHTIRVSIPDGGAQELQADIILLAPGT 146 >gi|297616357|ref|YP_003701516.1| glucose-inhibited division protein A [Syntrophothermus lipocalidus DSM 12680] gi|297144194|gb|ADI00951.1| glucose-inhibited division protein A [Syntrophothermus lipocalidus DSM 12680] Length = 622 Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust. Identities = 20/41 (48%), Positives = 25/41 (60%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMS 45 +YDVIVIGG G AA +A+ GA T LI H+ G M+ Sbjct: 51 AYDVIVIGGEPEGVAAAVASARNGAKTLLIEHRDGLGGLMT 91 >gi|55377517|ref|YP_135367.1| P-hydroxybenzoate hydroxylase [Haloarcula marismortui ATCC 43049] gi|55230242|gb|AAV45661.1| P-hydroxybenzoate hydroxylase [Haloarcula marismortui ATCC 43049] Length = 472 Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust. Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTST-IGSMSCNPAIGG 52 S DV+V+G G +GC AAA A G ++ K T G ++C A+ G Sbjct: 20 SLDVVVVGAGTSGCYAAATVADAGYDVVIVERKDETEAGHIACGDALKG 68 >gi|257867585|ref|ZP_05647238.1| conserved hypothetical protein [Enterococcus casseliflavus EC30] gi|257873914|ref|ZP_05653567.1| conserved hypothetical protein [Enterococcus casseliflavus EC10] gi|257801641|gb|EEV30571.1| conserved hypothetical protein [Enterococcus casseliflavus EC30] gi|257808078|gb|EEV36900.1| conserved hypothetical protein [Enterococcus casseliflavus EC10] Length = 420 Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust. Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 13/78 (16%) Query: 323 IRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQ---INGTTG---YE 376 +RT P LEK + G + INPK T+E+KKI+GL+ AG+ ING TG Sbjct: 346 VRTFP-LEKSFVT--GGGVHLKEINPK----TMESKKINGLYFAGELLDINGYTGGFNIT 398 Query: 377 EAAAQGLVAGINSARKSN 394 A G V+G N+A ++ Sbjct: 399 AAFCTGHVSGKNAAETAS 416 >gi|29347868|ref|NP_811371.1| putative pyridine nucleotide-disulphide oxidoreductase [Bacteroides thetaiotaomicron VPI-5482] gi|255690314|ref|ZP_05413989.1| putative pyridine nucleotide-disulphide oxidoreductase [Bacteroides finegoldii DSM 17565] gi|29339770|gb|AAO77565.1| putative pyridine nucleotide-disulphide oxidoreductase [Bacteroides thetaiotaomicron VPI-5482] gi|260624107|gb|EEX46978.1| putative pyridine nucleotide-disulphide oxidoreductase [Bacteroides finegoldii DSM 17565] Length = 626 Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 11/86 (12%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYD++VIG G AG A AA+LG ALI + G+ S + HL I+ Sbjct: 190 SYDLVVIGAGIAGMSTAVSAARLGCKVALINDRPVVGGNNSSEIRV------HLGGAIE- 242 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPA 90 +G+ + G+Q VK+G A Sbjct: 243 ----IGKYPELGGLQKEFGPVKEGNA 264 >gi|16263211|ref|NP_436004.1| Possible oxidase [Sinorhizobium meliloti 1021] gi|14523881|gb|AAK65416.1| Possible oxidase [Sinorhizobium meliloti 1021] Length = 452 Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust. Identities = 23/51 (45%), Positives = 28/51 (54%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIG 51 M R DVIV+GGG AG AA AAK G S L + + G++ PA G Sbjct: 1 MTMREADVIVVGGGPAGVSAAIEAAKSGLSVMLCEQRPALGGAIHRQPAEG 51 >gi|330814709|ref|YP_004362884.1| YD repeat protein [Burkholderia gladioli BSR3] gi|327374701|gb|AEA66052.1| YD repeat protein [Burkholderia gladioli BSR3] Length = 1412 Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust. Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 3/102 (2%) Query: 171 AGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT 230 AG+ D + +N+F +D D GR + P L G ++ + A + P+ + + Sbjct: 1233 AGQYADESTGLHYNTFRFYDPDVGRFVSQDPIGLYGGENLY--AYGRNAQRWIDPWGWCS 1290 Query: 231 DKITNRQIECGITR-TNLETHRIIMENIKHSAIYSGDIKSYG 271 K++N + G+TR N H I+ + K +A + YG Sbjct: 1291 VKLSNNMEKSGVTRPANSAAHHIVGDTSKEAAPARAILAKYG 1332 >gi|257877672|ref|ZP_05657325.1| conserved hypothetical protein [Enterococcus casseliflavus EC20] gi|257811838|gb|EEV40658.1| conserved hypothetical protein [Enterococcus casseliflavus EC20] Length = 420 Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust. Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 13/78 (16%) Query: 323 IRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQ---INGTTG---YE 376 +RT P LEK + G + INPK T+E+KKI+GL+ AG+ ING TG Sbjct: 346 VRTFP-LEKSFVT--GGGVHLKEINPK----TMESKKINGLYFAGELLDINGYTGGFNIT 398 Query: 377 EAAAQGLVAGINSARKSN 394 A G V+G N+A ++ Sbjct: 399 AAFCTGHVSGKNAAETAS 416 >gi|150403306|ref|YP_001330600.1| geranylgeranyl reductase [Methanococcus maripaludis C7] gi|209572864|sp|A6VJ23|GGR_METM7 RecName: Full=Digeranylgeranylglycerophospholipid reductase; Short=DGGGPL reductase; AltName: Full=2,3-di-O-geranylgeranylglyceryl phosphate reductase; AltName: Full=Geranylgeranyl reductase; Short=GGR gi|150034336|gb|ABR66449.1| geranylgeranyl reductase [Methanococcus maripaludis C7] Length = 390 Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust. Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 2/50 (4%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGS-MSCNPAI 50 +N SYDV+V+G G AG A+ A+K GA T LI K+ IG+ + C A+ Sbjct: 4 LNDSYDVVVVGAGPAGSMASYNASKNGAKTLLI-EKSQEIGTPVRCAEAV 52 >gi|184201087|ref|YP_001855294.1| dihydrolipoamide dehydrogenase [Kocuria rhizophila DC2201] gi|183581317|dbj|BAG29788.1| dihydrolipoamide dehydrogenase [Kocuria rhizophila DC2201] Length = 455 Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust. Identities = 46/158 (29%), Positives = 68/158 (43%), Gaps = 19/158 (12%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKT--STIGSMSCNPAIGGLGKGHL 58 M + YD++V+GGG AG AA A +LG S ALI + T C P L L Sbjct: 1 MADNQYDILVLGGGSAGYSAALRAVQLGYSVALIEKEKLGGTCLHWGCIPTKAYLHSAEL 60 Query: 59 VREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLD 118 R ++ GI+ + ++ G AVR + + + Y+ ++ +D Sbjct: 61 AEG--------ARESEKYGIKATLESIDMG-AVRDYKNKIVQGKYKGLTG--LMKMRKVD 109 Query: 119 VIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGT 156 VIQG G T KN I D + +VL TG+ Sbjct: 110 VIQGN--GKLTGKNTIDV----DGTTYTGEHIVLATGS 141 >gi|159904909|ref|YP_001548571.1| geranylgeranyl reductase [Methanococcus maripaludis C6] gi|209572863|sp|A9A6R1|GGR_METM6 RecName: Full=Digeranylgeranylglycerophospholipid reductase; Short=DGGGPL reductase; AltName: Full=2,3-di-O-geranylgeranylglyceryl phosphate reductase; AltName: Full=Geranylgeranyl reductase; Short=GGR gi|159886402|gb|ABX01339.1| geranylgeranyl reductase [Methanococcus maripaludis C6] Length = 390 Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust. Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 2/50 (4%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGS-MSCNPAI 50 +N SYDV+V+G G AG A+ A+K GA T LI K+ IG+ + C A+ Sbjct: 4 LNDSYDVVVVGAGPAGSMASYNASKNGAKTLLI-EKSQEIGTPVRCAEAV 52 >gi|15835460|ref|NP_297219.1| dihydrolipoamide dehydrogenase [Chlamydia muridarum Nigg] gi|270285640|ref|ZP_06195034.1| dihydrolipoamide dehydrogenase [Chlamydia muridarum Nigg] gi|270289649|ref|ZP_06195951.1| dihydrolipoamide dehydrogenase [Chlamydia muridarum Weiss] gi|301337036|ref|ZP_07225238.1| dihydrolipoamide dehydrogenase [Chlamydia muridarum MopnTet14] gi|14194687|sp|Q9PJI3|DLDH_CHLMU RecName: Full=Dihydrolipoyl dehydrogenase; AltName: Full=Dihydrolipoamide dehydrogenase; AltName: Full=E3 component of 2-oxoglutarate dehydrogenase complex gi|7190873|gb|AAF39644.1| 2-oxo acid dehydrogenase, E3 component, lipoamide dehydrogenase, putative [Chlamydia muridarum Nigg] Length = 465 Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust. Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 24/161 (14%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTS--TIGSMSCNPAIGGLGKGHLV 59 +N ++D +VIG G G AA AA+ G TALI + + T + C P+ L +V Sbjct: 1 MNEAFDCVVIGAGPGGYVAAITAAQAGLKTALIEEREAGGTCLNRGCIPSKALLASAEIV 60 Query: 60 REIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDV 119 +I R AD GI ++ V+ T + R I N + Sbjct: 61 AQI--------RHADQFGIHINGFSIDYPAMVQRKDT----------VVRSIRDGLNGLI 102 Query: 120 IQGEVAGFNTEKNIISS----IVMQDNSMIRCSTVVLTTGT 156 ++ F+ ++ISS I+ + S+I+ +++L TG+ Sbjct: 103 RSNKITVFSGRGSLISSTEVKILGETPSVIKAQSIILATGS 143 >gi|325571278|ref|ZP_08146778.1| pyridine nucleotide-disulfide oxidoreductase [Enterococcus casseliflavus ATCC 12755] gi|325155754|gb|EGC67950.1| pyridine nucleotide-disulfide oxidoreductase [Enterococcus casseliflavus ATCC 12755] Length = 420 Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust. Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 13/78 (16%) Query: 323 IRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQ---INGTTG---YE 376 +RT P LEK + G + INPK T+E+KKI+GL+ AG+ ING TG Sbjct: 346 VRTFP-LEKSFVT--GGGVHLKEINPK----TMESKKINGLYFAGELLDINGYTGGFNIT 398 Query: 377 EAAAQGLVAGINSARKSN 394 A G V+G N+A ++ Sbjct: 399 AAFCTGHVSGKNAAETAS 416 >gi|300709867|ref|YP_003735681.1| thioredoxin reductase [Halalkalicoccus jeotgali B3] gi|299123550|gb|ADJ13889.1| thioredoxin reductase [Halalkalicoccus jeotgali B3] Length = 306 Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust. Identities = 16/37 (43%), Positives = 22/37 (59%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTI 41 YDV+++GGG AGC A A+ G TA+ S+I Sbjct: 13 DYDVVIVGGGPAGCSAGVFTARYGLETAIFDRGRSSI 49 >gi|261420540|ref|YP_003254222.1| mercuric reductase [Geobacillus sp. Y412MC61] gi|319768209|ref|YP_004133710.1| mercuric reductase [Geobacillus sp. Y412MC52] gi|261376997|gb|ACX79740.1| mercuric reductase [Geobacillus sp. Y412MC61] gi|317113075|gb|ADU95567.1| mercuric reductase [Geobacillus sp. Y412MC52] Length = 546 Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust. Identities = 40/123 (32%), Positives = 54/123 (43%), Gaps = 18/123 (14%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR--EID 63 YD IVIG G A +A A K GA A++ + T+G N IG + L+R EI+ Sbjct: 85 YDYIVIGSGGAAFSSAIEAVKYGAKVAMV--ERGTVGGTCVN--IGCVPSKTLLRAGEIN 140 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADREL---YRLAMQREILSQENLDVI 120 AL A F L+ GP P + EL R A +++ + D I Sbjct: 141 AL---------ARNHPFLGLHTSAGPVDLAPLVKQKNELVEQLRQAKYADLIGEYGFDFI 191 Query: 121 QGE 123 QGE Sbjct: 192 QGE 194 >gi|291559361|emb|CBL38161.1| NADH:flavin oxidoreductases, Old Yellow Enzyme family [butyrate-producing bacterium SSC/2] Length = 665 Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust. Identities = 19/44 (43%), Positives = 29/44 (65%), Gaps = 1/44 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMS 45 +N+ +V+VIGGG AG EAA AA++G +T L K +G ++ Sbjct: 380 VNKPCNVVVIGGGTAGLEAACTAAEVGCTTFLF-EKNDHLGGLA 422 >gi|148990514|ref|ZP_01821652.1| hypothetical protein CGSSp6BS73_03461 [Streptococcus pneumoniae SP6-BS73] gi|147924230|gb|EDK75327.1| hypothetical protein CGSSp6BS73_03461 [Streptococcus pneumoniae SP6-BS73] Length = 486 Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLG 54 YDV++IG G +G AA + +LG T LI K S IG + N +G Sbjct: 2 YDVVIIGAGSSGALAAIASGRLGLKTCLI-EKGSRIGGVPINTLMGSFA 49 >gi|325968041|ref|YP_004244233.1| thioredoxin reductase [Vulcanisaeta moutnovskia 768-28] gi|323707244|gb|ADY00731.1| thioredoxin reductase [Vulcanisaeta moutnovskia 768-28] Length = 335 Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust. Identities = 18/37 (48%), Positives = 24/37 (64%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHK 37 + + YD I+IGGG AG AA AA+ G ST +IT + Sbjct: 20 LTGKVYDTIIIGGGPAGLSAAIYAARYGMSTIIITEE 56 >gi|297531352|ref|YP_003672627.1| mercuric reductase [Geobacillus sp. C56-T3] gi|297254604|gb|ADI28050.1| mercuric reductase [Geobacillus sp. C56-T3] Length = 546 Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust. Identities = 40/123 (32%), Positives = 54/123 (43%), Gaps = 18/123 (14%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR--EID 63 YD IVIG G A +A A K GA A++ + T+G N IG + L+R EI+ Sbjct: 85 YDYIVIGSGGAAFSSAIEAVKYGAKVAMV--ERGTVGGTCVN--IGCVPSKTLLRAGEIN 140 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADREL---YRLAMQREILSQENLDVI 120 AL A F L+ GP P + EL R A +++ + D I Sbjct: 141 AL---------ARNHPFLGLHTSAGPVDLAPLVKQKNELVEQLRQAKYADLIGEYGFDFI 191 Query: 121 QGE 123 QGE Sbjct: 192 QGE 194 >gi|254477925|ref|ZP_05091310.1| oxidoreductase [Ruegeria sp. R11] gi|214028510|gb|EEB69346.1| oxidoreductase [Ruegeria sp. R11] Length = 431 Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 6/87 (6%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALD 66 D+++IGGG+ GC AA AA+LGA L+ T G N + G ++IDAL Sbjct: 32 DLVIIGGGYTGCSAALRAAELGAEVCLLEADTFGAGGSGRNVGLVNAGLWLPPKQIDALL 91 Query: 67 G------LMGRVADAAGIQFRVLNVKK 87 G L +A A I F +++ + Sbjct: 92 GQKDGAHLSQTLAAAPSIVFDIISAHQ 118 >gi|307299501|ref|ZP_07579301.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Thermotogales bacterium mesG1.Ag.4.2] gi|306914900|gb|EFN45287.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Thermotogales bacterium mesG1.Ag.4.2] Length = 465 Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust. Identities = 40/158 (25%), Positives = 64/158 (40%), Gaps = 19/158 (12%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKT--STIGSMSCNPA---IGGLGKGHL 58 R +D IVIG G G A G AL+ K T + C P I HL Sbjct: 6 REFDAIVIGSGQGGTPLVLSLADEGWRVALVERKAVGGTCVNEGCTPTKTMIASARVAHL 65 Query: 59 VREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLD 118 V+ + G VA + + + + +K V E +R ++ I+ NL Sbjct: 66 VQRSEE----YGVVAGESSVDIQKVIQRKRQVV---------ESFREGSRKRIIDSPNLS 112 Query: 119 VIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGT 156 +I+G A F ++ + + + +I T+V+ TGT Sbjct: 113 LIEGS-ASFVGDRELEVRLKEGETELIEARTIVINTGT 149 >gi|313901048|ref|ZP_07834536.1| putative NADH oxidase [Clostridium sp. HGF2] gi|312954006|gb|EFR35686.1| putative NADH oxidase [Clostridium sp. HGF2] Length = 664 Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust. Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMS 45 + + +V+VIGGG AG EAA AA++G +T LI K +G +S Sbjct: 379 VKKPCNVVVIGGGTAGLEAACTAAEVGCTTFLI-EKEDHLGGLS 421 >gi|269118668|ref|YP_003306845.1| dihydrolipoamide dehydrogenase [Sebaldella termitidis ATCC 33386] gi|268612546|gb|ACZ06914.1| dihydrolipoamide dehydrogenase [Sebaldella termitidis ATCC 33386] Length = 563 Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust. Identities = 19/34 (55%), Positives = 25/34 (73%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHK 37 + YDVIVIGGG AG +A A++LGA TAL+ + Sbjct: 105 KEYDVIVIGGGPAGYISANKASQLGAKTALVEKR 138 >gi|220912080|ref|YP_002487389.1| flavoprotein disulfide reductase [Arthrobacter chlorophenolicus A6] gi|219858958|gb|ACL39300.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Arthrobacter chlorophenolicus A6] Length = 471 Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust. Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 29/165 (17%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID---- 63 + ++GGG G EAA VAA LGA +I GLG ++ ++ Sbjct: 12 IAILGGGPGGYEAAMVAASLGAQVTIIER--------------AGLGGSAVLTDVVPSKT 57 Query: 64 --ALDGLMGRVADAA--GIQFRVLNVKKGPAVRGPRTQADRELYRLAMQR-----EILSQ 114 A LM RVA+A G++F V P +R + L LA + + L+ Sbjct: 58 LIATADLMTRVAEAGELGVKFDVDGGDFVPVMRADLKHINDRLLNLARSQSKDIHDALAS 117 Query: 115 ENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLR 159 +N+ ++ G +G + + I + + I T++L G R Sbjct: 118 QNVRILAG--SGRLLDNHTIEVLTAEGTETIEADTILLAVGAHPR 160 >gi|192291324|ref|YP_001991929.1| 2-octaprenyl-6-methoxyphenyl hydroxylase [Rhodopseudomonas palustris TIE-1] gi|192285073|gb|ACF01454.1| Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family [Rhodopseudomonas palustris TIE-1] Length = 398 Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust. Identities = 19/34 (55%), Positives = 22/34 (64%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKT 38 SYD IV+GGG AG AA A +GA TALI + Sbjct: 10 SYDAIVVGGGPAGLTAAIALADIGAVTALIARQV 43 >gi|269122357|ref|YP_003310534.1| dihydrolipoamide dehydrogenase [Sebaldella termitidis ATCC 33386] gi|268616235|gb|ACZ10603.1| dihydrolipoamide dehydrogenase [Sebaldella termitidis ATCC 33386] Length = 562 Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust. Identities = 19/34 (55%), Positives = 25/34 (73%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHK 37 + YDVIVIGGG AG +A A++LGA TAL+ + Sbjct: 105 KEYDVIVIGGGPAGYISANKASQLGAKTALVEKR 138 >gi|167767338|ref|ZP_02439391.1| hypothetical protein CLOSS21_01857 [Clostridium sp. SS2/1] gi|167711313|gb|EDS21892.1| hypothetical protein CLOSS21_01857 [Clostridium sp. SS2/1] Length = 642 Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust. Identities = 19/44 (43%), Positives = 29/44 (65%), Gaps = 1/44 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMS 45 +N+ +V+VIGGG AG EAA AA++G +T L K +G ++ Sbjct: 357 VNKPCNVVVIGGGTAGLEAACTAAEVGCTTFLF-EKNDHLGGLA 399 >gi|255348937|ref|ZP_05380944.1| dihydrolipoamide dehydrogenase [Chlamydia trachomatis 70] gi|255503476|ref|ZP_05381866.1| dihydrolipoamide dehydrogenase [Chlamydia trachomatis 70s] gi|255507154|ref|ZP_05382793.1| dihydrolipoamide dehydrogenase [Chlamydia trachomatis D(s)2923] gi|289525602|emb|CBJ15080.1| dihydrolipoamide dehydrogenase [Chlamydia trachomatis Sweden2] gi|296435162|gb|ADH17340.1| dihydrolipoamide dehydrogenase [Chlamydia trachomatis E/150] gi|296438882|gb|ADH21035.1| dihydrolipoamide dehydrogenase [Chlamydia trachomatis E/11023] Length = 465 Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust. Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 24/161 (14%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTS--TIGSMSCNPAIGGLGKGHLV 59 +N ++D +VIG G G AA AA+ G TALI + + T + C P+ L +V Sbjct: 1 MNEAFDCVVIGAGPGGYVAAITAAQAGLKTALIEKREAGGTCLNRGCIPSKALLAGAEVV 60 Query: 60 REIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDV 119 +I R AD GI ++ V+ + ++ R I N + Sbjct: 61 TQI--------RHADQFGIHVEGFSINYPAMVQ----------RKDSVVRSIRDGLNGLI 102 Query: 120 IQGEVAGFNTEKNIISS----IVMQDNSMIRCSTVVLTTGT 156 ++ F+ ++ISS I+ ++ S+I+ +++L TG+ Sbjct: 103 RSNKITVFSGRGSLISSTEVKILGENPSVIKAHSIILATGS 143 >gi|15605286|ref|NP_220072.1| dihydrolipoamide dehydrogenase [Chlamydia trachomatis D/UW-3/CX] gi|76789294|ref|YP_328380.1| dihydrolipoamide dehydrogenase [Chlamydia trachomatis A/HAR-13] gi|237802986|ref|YP_002888180.1| dihydrolipoamide dehydrogenase [Chlamydia trachomatis B/Jali20/OT] gi|237804908|ref|YP_002889062.1| dihydrolipoamide dehydrogenase [Chlamydia trachomatis B/TZ1A828/OT] gi|255311375|ref|ZP_05353945.1| dihydrolipoamide dehydrogenase [Chlamydia trachomatis 6276] gi|255317676|ref|ZP_05358922.1| dihydrolipoamide dehydrogenase [Chlamydia trachomatis 6276s] gi|7531099|sp|O84561|DLDH_CHLTR RecName: Full=Dihydrolipoyl dehydrogenase; AltName: Full=Dihydrolipoamide dehydrogenase; AltName: Full=E3 component of 2-oxoglutarate dehydrogenase complex gi|3328997|gb|AAC68159.1| Lipoamide Dehydrogenase [Chlamydia trachomatis D/UW-3/CX] gi|76167824|gb|AAX50832.1| dihydrolipoamide dehydrogenase [Chlamydia trachomatis A/HAR-13] gi|231273208|emb|CAX10121.1| dihydrolipoamide dehydrogenase [Chlamydia trachomatis B/TZ1A828/OT] gi|231274220|emb|CAX11014.1| dihydrolipoamide dehydrogenase [Chlamydia trachomatis B/Jali20/OT] gi|296436090|gb|ADH18264.1| dihydrolipoamide dehydrogenase [Chlamydia trachomatis G/9768] gi|296437018|gb|ADH19188.1| dihydrolipoamide dehydrogenase [Chlamydia trachomatis G/11222] gi|296437951|gb|ADH20112.1| dihydrolipoamide dehydrogenase [Chlamydia trachomatis G/11074] gi|297140451|gb|ADH97209.1| dihydrolipoamide dehydrogenase [Chlamydia trachomatis G/9301] gi|297748687|gb|ADI51233.1| Dihydrolipoamide dehydrogenase [Chlamydia trachomatis D-EC] gi|297749567|gb|ADI52245.1| Dihydrolipoamide dehydrogenase [Chlamydia trachomatis D-LC] Length = 465 Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust. Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 24/161 (14%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTS--TIGSMSCNPAIGGLGKGHLV 59 +N ++D +VIG G G AA AA+ G TALI + + T + C P+ L +V Sbjct: 1 MNEAFDCVVIGAGPGGYVAAITAAQAGLKTALIEKREAGGTCLNRGCIPSKALLAGAEVV 60 Query: 60 REIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDV 119 +I R AD GI ++ V+ + ++ R I N + Sbjct: 61 TQI--------RHADQFGIHVEGFSINYPAMVQ----------RKDSVVRSIRDGLNGLI 102 Query: 120 IQGEVAGFNTEKNIISS----IVMQDNSMIRCSTVVLTTGT 156 ++ F+ ++ISS I+ ++ S+I+ +++L TG+ Sbjct: 103 RSNKITVFSGRGSLISSTEVKILGENPSVIKAHSIILATGS 143 >gi|319939108|ref|ZP_08013472.1| dihydrolipoamide dehydrogenase [Streptococcus anginosus 1_2_62CV] gi|319812158|gb|EFW08424.1| dihydrolipoamide dehydrogenase [Streptococcus anginosus 1_2_62CV] Length = 567 Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust. Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 2/45 (4%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCN 47 N +YD++VIGGG AG AA AA+LG AL+ + S +G N Sbjct: 109 NDAYDIVVIGGGPAGYVAAIKAAQLGGKIALV--EKSELGGTCLN 151 >gi|224537415|ref|ZP_03677954.1| hypothetical protein BACCELL_02293 [Bacteroides cellulosilyticus DSM 14838] gi|224520941|gb|EEF90046.1| hypothetical protein BACCELL_02293 [Bacteroides cellulosilyticus DSM 14838] Length = 619 Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 5/56 (8%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLV 59 ++YD++++GG G A AAKLG T++I +T IG + N GLG +V Sbjct: 20 QTYDIVIVGGTPGGLTTALAAAKLG-KTSVILERTQHIGGLPSN----GLGATDIV 70 >gi|152985857|ref|YP_001349702.1| putative penicillin amidase [Pseudomonas aeruginosa PA7] gi|150961015|gb|ABR83040.1| probable penicillin amidase [Pseudomonas aeruginosa PA7] Length = 847 Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust. Identities = 42/154 (27%), Positives = 64/154 (41%), Gaps = 13/154 (8%) Query: 262 IYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPN-GISTALPEEIQH 320 +Y+ + +Y RY + + + G R + +PE V N G++ L EEI Sbjct: 144 VYARGVNAYLYRYRDKLPMDLAQSGYR---PEYWKPEDSALVFVLLNFGLAVNLQEEIAS 200 Query: 321 QFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAA 380 I G +K+ + P Y P E P E +K+ GL L GQI G G + AA Sbjct: 201 LAIAQKVGSDKLAWLTPSY--------PDENLPFDEAEKLKGLRLDGQIPGLAGIDGAAR 252 Query: 381 QGLVAGINSARKSNKLDCICFSRTDSYIGVMIDD 414 Q + SN I R+ S ++ +D Sbjct: 253 QVAALSMLGVAASNNW-AIAPQRSRSGKSLLAND 285 >gi|25777812|gb|AAN75618.1| LPD1 [Cryptococcus neoformans var. neoformans] Length = 511 Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust. Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 13/154 (8%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGS---MSCNPAIGGLGKGHLVREI 62 YDV++IGGG G AA AA+LG TA I + + G+ + C P+ L H+ + Sbjct: 47 YDVVIIGGGPGGYVAAIKAAQLGFKTACIEKRGALGGTCLNVGCIPSKAMLNNSHIFHQT 106 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 L R D +GIQ LN+ K A + +A + ++ + + +D I+G Sbjct: 107 Q--HDLKNRGIDVSGIQ---LNLPKMLAAK----EASVKALTGGIETYLFKKNGIDYIKG 157 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGT 156 E A F T + ++ + + V++ TG+ Sbjct: 158 E-ASFETANKLSVKLLEGGETQVEAKNVIIATGS 190 >gi|326404795|ref|YP_004284877.1| mercuric reductase [Acidiphilium multivorum AIU301] gi|325051657|dbj|BAJ81995.1| mercuric reductase [Acidiphilium multivorum AIU301] Length = 479 Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust. Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 4/59 (6%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 D++VIG G AG AA A++LGA+ ALI H TIG N IG + L+R +AL Sbjct: 19 DLVVIGAGSAGFSAAIRASELGANVALIGH--GTIGGTCVN--IGCVPSKTLIRAAEAL 73 >gi|293372846|ref|ZP_06619224.1| conserved hypothetical protein [Bacteroides ovatus SD CMC 3f] gi|292632221|gb|EFF50821.1| conserved hypothetical protein [Bacteroides ovatus SD CMC 3f] Length = 624 Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust. Identities = 42/183 (22%), Positives = 74/183 (40%), Gaps = 32/183 (17%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLG-------- 54 + S DV++IGGG +G A +A++GA+T LI +T +G M + + + Sbjct: 23 DDSVDVLIIGGGASGVTAGIQSARMGAAT-LIVEETEWLGGMLTSAGVSAVDGNYDLPAG 81 Query: 55 -----KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQR 109 +GHL LD L A + V G + A++ L Sbjct: 82 LFGEFRGHLADYYGGLDSLKTGWVSAVLFEPSV-----GNKIFHEMVDAEKNL------- 129 Query: 110 EILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKI 169 ++ L ++ E + I+ I M+DN++ + +L GT L + + +K Sbjct: 130 KVWHNATLVKLERENDAW------IAQIQMKDNTIKKIHAKILIDGTELGDIAKMCGVKY 183 Query: 170 PAG 172 G Sbjct: 184 DVG 186 >gi|166154772|ref|YP_001654890.1| dihydrolipoamide dehydrogenase [Chlamydia trachomatis 434/Bu] gi|166155647|ref|YP_001653902.1| dihydrolipoamide dehydrogenase [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301336046|ref|ZP_07224290.1| dihydrolipoamide dehydrogenase [Chlamydia trachomatis L2tet1] gi|165930760|emb|CAP04257.1| dihydrolipoamide dehydrogenase [Chlamydia trachomatis 434/Bu] gi|165931635|emb|CAP07211.1| dihydrolipoamide dehydrogenase [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 465 Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust. Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 24/161 (14%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTS--TIGSMSCNPAIGGLGKGHLV 59 +N ++D +VIG G G AA AA+ G TALI + + T + C P+ L +V Sbjct: 1 MNEAFDCVVIGAGPGGYVAAITAAQAGLKTALIEKREAGGTCLNRGCIPSKALLAGAEVV 60 Query: 60 REIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDV 119 +I R AD GI ++ V+ + ++ R I N + Sbjct: 61 TQI--------RHADQFGIHVEGFSINYPAMVQ----------RKDSVVRSIRDGLNGLI 102 Query: 120 IQGEVAGFNTEKNIISS----IVMQDNSMIRCSTVVLTTGT 156 ++ F+ ++ISS I+ ++ S+I+ +++L TG+ Sbjct: 103 RSNKITVFSGRGSLISSTEVKILGENPSVIKAHSIILATGS 143 >gi|237716092|ref|ZP_04546573.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262407704|ref|ZP_06084252.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294643812|ref|ZP_06721610.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a] gi|294808473|ref|ZP_06767226.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b] gi|229443739|gb|EEO49530.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262354512|gb|EEZ03604.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292640901|gb|EFF59121.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a] gi|294444401|gb|EFG13115.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b] Length = 624 Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust. Identities = 42/183 (22%), Positives = 74/183 (40%), Gaps = 32/183 (17%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLG-------- 54 + S DV++IGGG +G A +A++GA+T LI +T +G M + + + Sbjct: 23 DDSVDVLIIGGGASGVTAGIQSARMGAAT-LIVEETEWLGGMLTSAGVSAVDGNYDLPAG 81 Query: 55 -----KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQR 109 +GHL LD L A + V G + A++ L Sbjct: 82 LFGEFRGHLADYYGGLDSLKTGWVSAVLFEPSV-----GNKIFHEMVDAEKNL------- 129 Query: 110 EILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKI 169 ++ L ++ E + I+ I M+DN++ + +L GT L + + +K Sbjct: 130 KVWHNATLVKLERENDAW------IAQIQMKDNTIKKIHAKILIDGTELGDIAKMCGVKY 183 Query: 170 PAG 172 G Sbjct: 184 DVG 186 >gi|322391945|ref|ZP_08065409.1| dihydrolipoamide dehydrogenase component E3 [Streptococcus peroris ATCC 700780] gi|321145171|gb|EFX40568.1| dihydrolipoamide dehydrogenase component E3 [Streptococcus peroris ATCC 700780] Length = 567 Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust. Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 2/45 (4%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCN 47 N +YDV+VIGGG AG +A AA+LG AL+ + S +G N Sbjct: 109 NDAYDVVVIGGGPAGYVSAIKAAQLGGKVALV--EKSELGGTCLN 151 >gi|83955827|ref|ZP_00964369.1| mercuric reductase [Sulfitobacter sp. NAS-14.1] gi|83839832|gb|EAP79009.1| mercuric reductase [Sulfitobacter sp. NAS-14.1] Length = 485 Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 4/61 (6%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYD+IV+G G AG A+ AA+ G AL+ H TIG N +G + ++R DA Sbjct: 22 SYDLIVVGAGSAGFSASITAAEAGKRVALVGH--GTIGGTCVN--VGCVPSKAMIRAADA 77 Query: 65 L 65 + Sbjct: 78 V 78 >gi|332799299|ref|YP_004460798.1| hypothetical protein TepRe1_1345 [Tepidanaerobacter sp. Re1] gi|332697034|gb|AEE91491.1| HI0933 family protein [Tepidanaerobacter sp. Re1] Length = 412 Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust. Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 10/76 (13%) Query: 321 QFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQ---INGTTG--- 374 F TI G ++ I + INPK T+E+K ++GLF AG+ ++G TG Sbjct: 338 NFQITISGCKEKEAIVTRGGVSVKEINPK----TMESKIVNGLFFAGEVIDVDGVTGGYN 393 Query: 375 YEEAAAQGLVAGINSA 390 + A + G VAG NSA Sbjct: 394 LQSAFSTGFVAGCNSA 409 >gi|150377188|ref|YP_001313783.1| BFD/(2Fe-2S)-binding domain-containing protein [Sinorhizobium medicae WSM419] gi|150031735|gb|ABR63850.1| BFD domain protein (2Fe-2S)-binding domain protein [Sinorhizobium medicae WSM419] Length = 453 Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust. Identities = 21/48 (43%), Positives = 27/48 (56%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIG 51 R D+IV+GGG AG AA AAK G S L + + G++ PA G Sbjct: 2 READIIVVGGGPAGVSAAVEAAKSGLSVVLCEQRPALGGAIHRQPAEG 49 >gi|168333290|ref|ZP_02691574.1| fumarate reductase/succinate dehydrogenase flavoprotein-like [Epulopiscium sp. 'N.t. morphotype B'] Length = 594 Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 30/55 (54%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHL 58 R YD IV+GGG +G AA AA+ G TAL+ ++ G+ S + G G + Sbjct: 2 REYDFIVVGGGMSGVCAAISAARNGVKTALVHNRPVLGGNASSEVKVSINGAGRI 56 >gi|103487991|ref|YP_617552.1| mercuric reductase MerA [Sphingopyxis alaskensis RB2256] gi|98978068|gb|ABF54219.1| Mercuric reductase MerA [Sphingopyxis alaskensis RB2256] Length = 479 Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 4/62 (6%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YD+IV+GGG AG AA AA+ GA A+I TIG N +G + L+R ++ Sbjct: 14 KKYDLIVVGGGSAGFSAAITAAEQGAQVAVI--GAGTIGGTCVN--VGCVPSKALIRAVE 69 Query: 64 AL 65 ++ Sbjct: 70 SI 71 >gi|160931794|ref|ZP_02079187.1| hypothetical protein CLOLEP_00625 [Clostridium leptum DSM 753] gi|156869131|gb|EDO62503.1| hypothetical protein CLOLEP_00625 [Clostridium leptum DSM 753] Length = 437 Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust. Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 5/61 (8%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSM----SCNPAIGGLGKGHLVRE 61 YDV+V GGG AG AA AA+ GA T LI + +G M +P +G + G + E Sbjct: 13 YDVVVAGGGPAGVCAAVSAARQGAKTLLI-ERFGILGGMMTSGHVDPILGNVAPGTMYDE 71 Query: 62 I 62 I Sbjct: 72 I 72 >gi|326429823|gb|EGD75393.1| FAD dependent oxidoreductase [Salpingoeca sp. ATCC 50818] Length = 579 Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 13/74 (17%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAI----------- 50 ++R+YD I++GGGH G AAA A+ G L+ K +G + + I Sbjct: 7 VSRAYDAIIVGGGHNGLVAAAYLARQGGKV-LVLEKNDQVGGAAVSSEIVPGFKFSRASY 65 Query: 51 -GGLGKGHLVREID 63 GL + +V+E+D Sbjct: 66 LAGLIRPSIVKELD 79 >gi|45357951|ref|NP_987508.1| geranylgeranyl reductase [Methanococcus maripaludis S2] gi|74555631|sp|Q6M083|GGR_METMP RecName: Full=Digeranylgeranylglycerophospholipid reductase; Short=DGGGPL reductase; AltName: Full=2,3-di-O-geranylgeranylglyceryl phosphate reductase; AltName: Full=Geranylgeranyl reductase; Short=GGR gi|44920708|emb|CAF29944.1| geranylgeranyl bacterial chlorophyll reductase related [Methanococcus maripaludis S2] Length = 390 Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust. Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 2/50 (4%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGS-MSCNPAI 50 +N SYDV+V+G G AG A+ A+K GA T LI K+ IG+ + C A+ Sbjct: 4 LNDSYDVVVVGAGPAGSMASYNASKNGAKTLLI-EKSQEIGTPVRCAEAV 52 >gi|254234168|ref|ZP_04927491.1| hypothetical protein PACG_00002 [Pseudomonas aeruginosa C3719] gi|126166099|gb|EAZ51610.1| hypothetical protein PACG_00002 [Pseudomonas aeruginosa C3719] Length = 847 Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust. Identities = 41/156 (26%), Positives = 67/156 (42%), Gaps = 17/156 (10%) Query: 262 IYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYP---NGISTALPEEI 318 +Y+ + +Y RY + + + G R + +PE ++ +V+ G++ L EEI Sbjct: 144 VYARGVNAYLYRYRDKLPMDLAQSGYR---PEYWKPE--DSALVFALLNFGLAVNLQEEI 198 Query: 319 QHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEA 378 + G +K+ + P Y P E P E +K+ GL L GQ+ G G E A Sbjct: 199 ASLTLAQKVGSDKLAWLTPTY--------PDENLPFDEAEKLKGLRLDGQVPGLAGVEGA 250 Query: 379 AAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDD 414 A Q + SN I R+ S +M +D Sbjct: 251 ARQVAALSMLGVAASNNW-AIAPQRSRSGKSLMAND 285 >gi|313620436|gb|EFR91824.1| NADH oxidase [Listeria innocua FSL S4-378] Length = 664 Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust. Identities = 19/41 (46%), Positives = 25/41 (60%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIG 42 + +V+VIGGG AG EAA AA++G +T LI T G Sbjct: 380 VTHPTNVVVIGGGTAGLEAACTAAEVGCNTTLIEANEQTGG 420 >gi|19704405|ref|NP_603967.1| tRNA (uracil-5-)-methyltransferase Gid [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|26006763|sp|Q8REM9|TRMFO_FUSNN RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase gi|19714663|gb|AAL95266.1| Glucose inhibited division protein A [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 434 Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust. Identities = 35/112 (31%), Positives = 48/112 (42%), Gaps = 4/112 (3%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK-KISGLFLAG 367 G T L Q + IPGLE IR G +IN +L ++ AG Sbjct: 279 GFQTNLKFGEQKRVFSMIPGLENAEFIRYGVMHRNTFINSTKLLDKTLKLKNKDNIYFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSA-RKSNKLDCICFSRTDSYIGVMIDDLTSK 418 QI G GY A A G+ +N A R NK + I S IG +++ +T + Sbjct: 339 QITGGEGYVTAIATGMYVAMNVANRLENKEEFIL--EDISEIGAIVNYITEE 388 >gi|328880360|emb|CCA53599.1| Beta-carotene ketolase [Streptomyces venezuelae ATCC 10712] Length = 522 Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust. Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 1/49 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIG-SMSCNPAIG 51 RSYD +V+GGGH G AAA A+ G S ++ ST G ++S P G Sbjct: 15 RSYDAVVVGGGHNGLVAAAYLARAGRSVLVLERLGSTGGAAVSTRPFAG 63 >gi|115379513|ref|ZP_01466607.1| gid protein [Stigmatella aurantiaca DW4/3-1] gi|310822344|ref|YP_003954702.1| methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase, trmfo [Stigmatella aurantiaca DW4/3-1] gi|115363491|gb|EAU62632.1| gid protein [Stigmatella aurantiaca DW4/3-1] gi|309395416|gb|ADO72875.1| Methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase, TrmFO [Stigmatella aurantiaca DW4/3-1] Length = 450 Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust. Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 322 FIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAGQINGTTGYEEAAA 380 F IPGL+ +R G +I+ P+ L L K LF AGQI G GY E++A Sbjct: 295 FTTCIPGLKDAEFLRMGQIHRNTFIDSPRLLDKDLSLKAERRLFFAGQITGVEGYVESSA 354 Query: 381 QGLVAGI 387 G + + Sbjct: 355 CGYLTAL 361 >gi|25573183|gb|AAN75159.1| LPD1 [Cryptococcus neoformans var. grubii] Length = 511 Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust. Identities = 42/154 (27%), Positives = 72/154 (46%), Gaps = 13/154 (8%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGS---MSCNPAIGGLGKGHLVREI 62 YDV++IGGG G AA AA+LG TA I + + G+ + C P+ L H+ + Sbjct: 47 YDVVIIGGGPGGYVAAIKAAQLGFKTACIEKRGALGGTCLNVGCIPSKAMLNNSHIFHQT 106 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 L R D +GIQ LN+ K A + +A + ++ + + +D I+G Sbjct: 107 Q--HDLKNRGIDVSGIQ---LNLPKMLAAK----EASVKALTGGIETYLFKKNGIDYIKG 157 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGT 156 E A F T + ++ + + +++ TG+ Sbjct: 158 E-ASFETANKVNVKLLEGGETQVEAKNIIIATGS 190 >gi|13541824|ref|NP_111512.1| geranylgeranyl reductase [Thermoplasma volcanium GSS1] gi|74581174|sp|Q979Y7|GGR_THEVO RecName: Full=Digeranylgeranylglycerophospholipid reductase; Short=DGGGPL reductase; AltName: Full=2,3-di-O-geranylgeranylglyceryl phosphate reductase; AltName: Full=Geranylgeranyl reductase; Short=GGR gi|14325261|dbj|BAB60165.1| cofactor biosynthesis protein [Thermoplasma volcanium GSS1] Length = 396 Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust. Identities = 23/54 (42%), Positives = 28/54 (51%), Gaps = 3/54 (5%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHL 58 +YDV+VIGGG G AA AAK G T +I + + C GL KG L Sbjct: 3 TYDVLVIGGGPGGSTAARYAAKYGLRTLMIEKRPEIGSPVRCGE---GLSKGIL 53 >gi|307596220|ref|YP_003902537.1| thioredoxin reductase [Vulcanisaeta distributa DSM 14429] gi|307551421|gb|ADN51486.1| thioredoxin reductase [Vulcanisaeta distributa DSM 14429] Length = 335 Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust. Identities = 17/37 (45%), Positives = 25/37 (67%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHK 37 + ++ YD ++IGGG AG AA AA+ G ST +IT + Sbjct: 20 LTSKVYDTVIIGGGPAGMSAAIYAARYGLSTIIITEE 56 >gi|15596229|ref|NP_249723.1| QuiP [Pseudomonas aeruginosa PAO1] gi|218893006|ref|YP_002441875.1| QuiP [Pseudomonas aeruginosa LESB58] gi|81541636|sp|Q9I4U2|QUIP_PSEAE RecName: Full=Acyl-homoserine lactone acylase quiP; Short=AHL acylase quiP; Short=Acyl-HSL acylase quiP; AltName: Full=Quorum signal utilization and inactivation protein; Contains: RecName: Full=Acyl-homoserine lactone acylase quiP subunit alpha; Short=Acyl-HSL acylase quiP subunit alpha; Contains: RecName: Full=Acyl-homoserine lactone acylase quiP subunit beta; Short=Acyl-HSL acylase quiP subunit beta; Flags: Precursor gi|9946944|gb|AAG04421.1|AE004535_8 QuiP [Pseudomonas aeruginosa PAO1] gi|218773234|emb|CAW29046.1| QuiP [Pseudomonas aeruginosa LESB58] Length = 847 Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust. Identities = 41/156 (26%), Positives = 67/156 (42%), Gaps = 17/156 (10%) Query: 262 IYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYP---NGISTALPEEI 318 +Y+ + +Y RY + + + G R + +PE ++ +V+ G++ L EEI Sbjct: 144 VYARGVNAYLYRYRDKLPMDLAQSGYR---PEYWKPE--DSALVFALLNFGLAVNLQEEI 198 Query: 319 QHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEA 378 + G +K+ + P Y P E P E +K+ GL L GQ+ G G E A Sbjct: 199 ASLTLAQKVGSDKLAWLTPTY--------PDENLPFDEAEKLKGLRLDGQVPGLAGVEGA 250 Query: 379 AAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDD 414 A Q + SN I R+ S +M +D Sbjct: 251 ARQVAALSMLGVAASNNW-AIAPQRSRSGKSLMAND 285 >gi|302339853|ref|YP_003805059.1| fumarate reductase/succinate dehydrogenase flavoprotein domain protein [Spirochaeta smaragdinae DSM 11293] gi|301637038|gb|ADK82465.1| fumarate reductase/succinate dehydrogenase flavoprotein domain protein [Spirochaeta smaragdinae DSM 11293] Length = 486 Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust. Identities = 21/43 (48%), Positives = 25/43 (58%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMS 45 N YDVIV GGG +G AA AA+ GA T L+ + G MS Sbjct: 4 NTVYDVIVCGGGTSGVSAAISAARNGAKTLLVERLGALGGQMS 46 >gi|58265916|ref|XP_570114.1| dihydrolipoyl dehydrogenase [Cryptococcus neoformans var. neoformans JEC21] gi|134110356|ref|XP_776005.1| hypothetical protein CNBD0550 [Cryptococcus neoformans var. neoformans B-3501A] gi|25956306|gb|AAN75720.1| LPD1 [Cryptococcus neoformans var. neoformans] gi|50258673|gb|EAL21358.1| hypothetical protein CNBD0550 [Cryptococcus neoformans var. neoformans B-3501A] gi|57226347|gb|AAW42807.1| dihydrolipoyl dehydrogenase, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 511 Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust. Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 13/154 (8%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGS---MSCNPAIGGLGKGHLVREI 62 YDV++IGGG G AA AA+LG TA I + + G+ + C P+ L H+ + Sbjct: 47 YDVVIIGGGPGGYVAAIKAAQLGFKTACIEKRGALGGTCLNVGCIPSKAMLNNSHIFHQT 106 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 L R D +GIQ LN+ K A + +A + ++ + + +D I+G Sbjct: 107 Q--HDLKNRGIDVSGIQ---LNLPKMLAAK----EASVKALTGGIETYLFKKNGIDYIKG 157 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGT 156 E A F T + ++ + + V++ TG+ Sbjct: 158 E-ASFETANKLNVKLLEGGETQVEAKNVIIATGS 190 >gi|329897434|ref|ZP_08272089.1| Glutathione reductase [gamma proteobacterium IMCC3088] gi|328921194|gb|EGG28596.1| Glutathione reductase [gamma proteobacterium IMCC3088] Length = 454 Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust. Identities = 41/124 (33%), Positives = 58/124 (46%), Gaps = 14/124 (11%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +YD+IVIG G G AA +AA LGA A+I + +G N +G + K V Sbjct: 1 MGSNYDLIVIGAGSGGVRAARIAASLGAKVAIIEDR--YMGGTCVN--VGCVPKKLYVYA 56 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPR-TQAD-RELYRL-AMQREILSQENLD 118 + V DA G +R K P P TQA +E+ RL + R++L+ Sbjct: 57 SE----FGAAVEDAEGFGWR---FKDAPEFDWPTLTQAKVKEIGRLNGIYRKMLNNSGAT 109 Query: 119 VIQG 122 VI G Sbjct: 110 VIDG 113 >gi|327460392|gb|EGF06729.1| dihydrolipoyl dehydrogenase [Streptococcus sanguinis SK1057] Length = 461 Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 2/56 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKT--STIGSMSCNPAIGGLGKGHLV 59 YDV++IG G G AA AA+LG A++ K+ T ++ C P+ L GH + Sbjct: 19 YDVLIIGAGPGGYVAAEEAARLGKKVAVVEKKSIGGTCLNVGCIPSKAYLQHGHWL 74 >gi|310816013|ref|YP_003963977.1| gid protein [Ketogulonicigenium vulgare Y25] gi|308754748|gb|ADO42677.1| gid protein [Ketogulonicigenium vulgare Y25] Length = 445 Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 1/78 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN-PKELFPTLETKKISGLFLAG 367 G T + Q + IPGL + R G +IN P L + K + AG Sbjct: 286 GFQTKMKYGAQTNVFKMIPGLHDASFARLGGIHRNTFINSPTLLDGQMRLKSRPNIRFAG 345 Query: 368 QINGTTGYEEAAAQGLVA 385 QI G GY E++A GL+A Sbjct: 346 QITGVEGYVESSAMGLLA 363 >gi|116048960|ref|YP_792238.1| putative penicillin amidase [Pseudomonas aeruginosa UCBPP-PA14] gi|115584181|gb|ABJ10196.1| putative penicillin amidase [Pseudomonas aeruginosa UCBPP-PA14] Length = 847 Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust. Identities = 41/156 (26%), Positives = 67/156 (42%), Gaps = 17/156 (10%) Query: 262 IYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYP---NGISTALPEEI 318 +Y+ + +Y RY + + + G R + +PE ++ +V+ G++ L EEI Sbjct: 144 VYARGVNAYLYRYRDKLPMDLAQSGYR---PEYWKPE--DSALVFALLNFGLAVNLQEEI 198 Query: 319 QHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEA 378 + G +K+ + P Y P E P E +K+ GL L GQ+ G G E A Sbjct: 199 ASLTLAQKVGSDKLAWLTPTY--------PDENLPFDEAEKLKGLRLDGQVPGLAGVEGA 250 Query: 379 AAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDD 414 A Q + SN I R+ S +M +D Sbjct: 251 ARQVAALSMLGVAASNNW-AIAPQRSRSGKSLMAND 285 >gi|182419042|ref|ZP_02950296.1| NADH oxidase [Clostridium butyricum 5521] gi|237669339|ref|ZP_04529321.1| NADH oxidase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376997|gb|EDT74567.1| NADH oxidase [Clostridium butyricum 5521] gi|237655226|gb|EEP52784.1| NADH oxidase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 667 Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust. Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 1/44 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMS 45 +N+ +V+VIGGG AG EAA AA+ G T L K S +G ++ Sbjct: 379 VNKHTNVVVIGGGTAGLEAACTAAEAGCMTFLF-EKKSYLGGLA 421 >gi|310641925|ref|YP_003946683.1| NADH:flavin oxidoreductase, putative [Paenibacillus polymyxa SC2] gi|309246875|gb|ADO56442.1| NADH:flavin oxidoreductase, putative [Paenibacillus polymyxa SC2] Length = 673 Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 10/54 (18%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGK 55 + S V+VIGGG AG EAA AA++G L K P +GGL + Sbjct: 380 VRNSVQVVVIGGGTAGMEAACTAAEVGCKVTLFEEK----------PELGGLAR 423 >gi|262067705|ref|ZP_06027317.1| tRNA:M(5)U-54 methyltransferase [Fusobacterium periodonticum ATCC 33693] gi|291378430|gb|EFE85948.1| tRNA:M(5)U-54 methyltransferase [Fusobacterium periodonticum ATCC 33693] Length = 434 Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 36/87 (41%), Gaps = 1/87 (1%) Query: 309 GISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK-KISGLFLAG 367 G T L Q + IPGLE +R G +IN +L ++ AG Sbjct: 279 GFQTNLKFGEQKRVFSMIPGLENAEFVRYGVMHRNTFINSTKLLDKTLKLKNKDNVYFAG 338 Query: 368 QINGTTGYEEAAAQGLVAGINSARKSN 394 QI G GY A A G+ IN A + N Sbjct: 339 QITGGEGYVTAIATGMYTAINVANRLN 365 >gi|228473514|ref|ZP_04058267.1| dihydrolipoyl dehydrogenase [Capnocytophaga gingivalis ATCC 33624] gi|228275121|gb|EEK13924.1| dihydrolipoyl dehydrogenase [Capnocytophaga gingivalis ATCC 33624] Length = 203 Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 5/62 (8%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIG----SMSCNPAIGGLGKGHLV 59 ++YDVIVIG G G AA A++LG TA++ K +T+G ++ C P+ L HL+ Sbjct: 2 KNYDVIVIGAGPGGYVAAIRASQLGKKTAIV-EKYNTLGGTCLNVGCIPSKALLDSTHLL 60 Query: 60 RE 61 + Sbjct: 61 ED 62 >gi|218281477|ref|ZP_03487920.1| hypothetical protein EUBIFOR_00485 [Eubacterium biforme DSM 3989] gi|218217399|gb|EEC90937.1| hypothetical protein EUBIFOR_00485 [Eubacterium biforme DSM 3989] Length = 665 Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust. Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 1/44 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMS 45 + + +V+VIGGG AG EAA AA++G T LI K +G +S Sbjct: 379 VKKPCNVVVIGGGTAGLEAACTAAEVGCMTFLI-EKEDHLGGLS 421 >gi|1730742|sp|P54805|YNH2_METBA RecName: Full=Uncharacterized protein in nifH2 5'region; AltName: Full=ORF186 gi|984851|gb|AAA96016.1| orf186 [Methanosarcina barkeri] Length = 186 Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust. Identities = 20/42 (47%), Positives = 24/42 (57%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSC 46 SYDV+V+G G AG AA AAK GAS L+ K + C Sbjct: 6 SYDVVVVGAGPAGSTAAMYAAKNGASVLLLDKKREIGSPIQC 47 >gi|39935737|ref|NP_948013.1| 2-octaprenyl-6-methoxyphenyl hydroxylase [Rhodopseudomonas palustris CGA009] gi|39649590|emb|CAE28112.1| putative FAD-dependent monoxygenase [Rhodopseudomonas palustris CGA009] Length = 398 Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust. Identities = 19/33 (57%), Positives = 22/33 (66%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHK 37 SYD IV+GGG AG AA A+ GA TALI + Sbjct: 10 SYDAIVVGGGPAGLTAAIALAETGAVTALIARQ 42 >gi|282900015|ref|ZP_06307975.1| Putative oxidoreductase [Cylindrospermopsis raciborskii CS-505] gi|281195113|gb|EFA70050.1| Putative oxidoreductase [Cylindrospermopsis raciborskii CS-505] Length = 530 Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust. Identities = 18/42 (42%), Positives = 24/42 (57%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGS 43 I +SYDV+V GGGH G AA AK G S ++ + G+ Sbjct: 9 IQKSYDVVVAGGGHNGLIAACYIAKAGRSVLVLEQQDKVGGT 50 >gi|148240080|ref|YP_001225467.1| dihydrolipoamide dehydrogenase [Synechococcus sp. WH 7803] gi|147848619|emb|CAK24170.1| Dihydrolipoamide dehydrogenase [Synechococcus sp. WH 7803] Length = 482 Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust. Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 2/77 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKT--STIGSMSCNPAIGGLGKGHLVREID 63 +DVIVIG G+ G +AA AA+ G A+I + T + C P+ L VRE+ Sbjct: 8 FDVIVIGAGYGGFDAAKHAAEHGLKVAIIESRDMGGTCVNRGCVPSKALLAASGRVRELA 67 Query: 64 ALDGLMGRVADAAGIQF 80 D L G AA ++F Sbjct: 68 DADHLAGFGIHAAPVRF 84 >gi|86138166|ref|ZP_01056741.1| hypothetical protein MED193_01525 [Roseobacter sp. MED193] gi|85825193|gb|EAQ45393.1| hypothetical protein MED193_01525 [Roseobacter sp. MED193] Length = 424 Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust. Identities = 17/28 (60%), Positives = 22/28 (78%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALI 34 D++VIGGG+ GC AA AA++GAS LI Sbjct: 30 DLVVIGGGYTGCSAALKAAEMGASVCLI 57 >gi|182420284|ref|ZP_02951513.1| oxidoreductase, pyridine nucleotide-disulphide family [Clostridium butyricum 5521] gi|237666394|ref|ZP_04526379.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182375879|gb|EDT73471.1| oxidoreductase, pyridine nucleotide-disulphide family [Clostridium butyricum 5521] gi|237657593|gb|EEP55148.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 319 Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 28/51 (54%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGK 55 SYD+I+IG G AG AA AA+ G L+ K S++G + G GK Sbjct: 3 SYDLIIIGAGIAGMTAALGAARQGIGKILVIEKESSVGGIINQCIHNGFGK 53 >gi|304316800|ref|YP_003851945.1| glucose-inhibited division protein A [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778302|gb|ADL68861.1| glucose-inhibited division protein A [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 427 Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 8/77 (10%) Query: 323 IRTIPGLEKVNIIRP-----GYAIEYDYINPKELFPTLETKKISGLFLAGQINGT-TGYE 376 +R IPGLE+ P +I Y I P+ +++ K + L AG+ +G TG+ Sbjct: 276 LRKIPGLERARFEDPYSGGKANSIRYLSIAPRN--NSMKVKGLDNLLCAGEKSGLFTGHT 333 Query: 377 EAAAQGLVAGINSARKS 393 EA G +AG NS R S Sbjct: 334 EAMVTGCLAGHNSVRLS 350 >gi|303237290|ref|ZP_07323860.1| alkyl hydroperoxide reductase, F subunit [Prevotella disiens FB035-09AN] gi|302482677|gb|EFL45702.1| alkyl hydroperoxide reductase, F subunit [Prevotella disiens FB035-09AN] Length = 519 Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust. Identities = 39/158 (24%), Positives = 60/158 (37%), Gaps = 42/158 (26%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 I R YDV+VIGGG AG AA +A+ G LI + Sbjct: 211 IERQYDVMVIGGGPAGVSAAIYSARKGLKVGLIAER------------------------ 246 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 + G+V D GIQ N+ P G + AD + + LS +D+ + Sbjct: 247 ------IGGQVNDTTGIQ----NLISVPQTNGTQLAADLKSH--------LSDYPIDLFE 288 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLR 159 K+ + SI ++ + + V++ TG R Sbjct: 289 HRKIANVELKDKLKSIHVKGGEVFKAPAVIIATGANWR 326 >gi|119713765|gb|ABL97813.1| possible NADH-dependant oxidoreductase [uncultured marine bacterium HF10_49E08] Length = 617 Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust. Identities = 34/135 (25%), Positives = 60/135 (44%), Gaps = 9/135 (6%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCN---PAIGGLGKGHL 58 + + YD++VIGGG++G AA A++G ALI + G+ S A G + +G Sbjct: 180 LEKKYDLVVIGGGYSGLGAAISGARMGCKVALIQDRGVLGGNGSSEVRVWAKGNIRRGKY 239 Query: 59 VREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQRE-----ILS 113 R + ++ + + G + KK VR + D L+ A + E I + Sbjct: 240 PRIGEIIEEICDHAKKSPGTYEEFEDAKKEAIVRAEKN-IDLHLFHHAFKVEKQGNKISA 298 Query: 114 QENLDVIQGEVAGFN 128 +V G++ F+ Sbjct: 299 VHAFNVQNGQITRFS 313 >gi|157835045|pdb|2GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Oxidized Glutathione Complex gi|157836819|pdb|3GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Oxidized Trypanothione Complex gi|157836953|pdb|4GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Mixed Disulfide Between Trypanothione And The Enzyme gi|157837042|pdb|5GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Glutathionylspermidine Complex Length = 461 Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust. Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 2/46 (4%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALI-THKT-STIGSMSCNP 48 SYD +VIGGG G E+A AA+LGA A++ +HK T ++ C P Sbjct: 3 SYDYLVIGGGSGGLESAWRAAELGARAAVVESHKLGGTCVNVGCVP 48 >gi|134046277|ref|YP_001097762.1| geranylgeranyl reductase [Methanococcus maripaludis C5] gi|209572862|sp|A4FZB4|GGR_METM5 RecName: Full=Digeranylgeranylglycerophospholipid reductase; Short=DGGGPL reductase; AltName: Full=2,3-di-O-geranylgeranylglyceryl phosphate reductase; AltName: Full=Geranylgeranyl reductase; Short=GGR gi|132663902|gb|ABO35548.1| 2,3-di-O-geranylgeranylglyceryl phosphate reductase [Methanococcus maripaludis C5] Length = 390 Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust. Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 2/50 (4%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGS-MSCNPAI 50 +N SYDV+V+G G AG A+ A+K GA T L+ K+ IG+ + C A+ Sbjct: 4 LNNSYDVVVVGAGPAGSMASYNASKNGAKT-LLLEKSQEIGTPVRCAEAV 52 >gi|157831250|pdb|1GRT|A Chain A, Human Glutathione Reductase A34eR37W MUTANT Length = 478 Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust. Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 2/46 (4%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALI-THKT-STIGSMSCNP 48 SYD +VIGGG G E+A AA+LGA A++ +HK T ++ C P Sbjct: 20 SYDYLVIGGGSGGLESAWRAAELGARAAVVESHKLGGTCVNVGCVP 65 >gi|254467596|ref|ZP_05081005.1| oxidoreductase [Rhodobacterales bacterium Y4I] gi|206684344|gb|EDZ44828.1| oxidoreductase [Rhodobacterales bacterium Y4I] Length = 423 Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust. Identities = 20/41 (48%), Positives = 26/41 (63%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCN 47 D++VIGGG+ GC AA AA+LGAS LI + + G N Sbjct: 30 DLVVIGGGYTGCSAALKAAELGASVRLIEAEDTGSGGSGRN 70 >gi|169841667|ref|ZP_02874780.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [candidate division TM7 single-cell isolate TM7a] Length = 61 Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust. Identities = 17/45 (37%), Positives = 29/45 (64%) Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSN 578 E+++I + Y + R+ + ++ K EK +IP+DFDY S+ LSN Sbjct: 4 EQVEINAKYNVFIEREKAQIEKFKKLEKMVIPEDFDYESVKGLSN 48 >gi|323351609|ref|ZP_08087263.1| dihydrolipoyl dehydrogenase [Streptococcus sanguinis VMC66] gi|322122095|gb|EFX93821.1| dihydrolipoyl dehydrogenase [Streptococcus sanguinis VMC66] Length = 461 Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 2/56 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKT--STIGSMSCNPAIGGLGKGHLV 59 YDV++IG G G AA AA+LG A++ K+ T ++ C P+ L GH + Sbjct: 19 YDVLIIGAGPGGYVAAEEAARLGKKVAVVEKKSIGGTCLNVGCIPSKAYLQHGHWL 74 >gi|21226820|ref|NP_632742.1| oxidoreductase [Methanosarcina mazei Go1] gi|20905119|gb|AAM30414.1| oxidoreductase [Methanosarcina mazei Go1] Length = 408 Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust. Identities = 19/42 (45%), Positives = 24/42 (57%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSC 46 SYD++V+G G AG AA AAK GAS L+ K + C Sbjct: 18 SYDIVVVGAGPAGSTAALYAAKKGASVLLLDKKREIGSPIQC 59 >gi|83646636|ref|YP_435071.1| glutathione-disulfide reductase [Hahella chejuensis KCTC 2396] gi|83634679|gb|ABC30646.1| glutathione-disulfide reductase [Hahella chejuensis KCTC 2396] Length = 448 Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust. Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 2/45 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHK--TSTIGSMSCNP 48 YD++VIG G G AA VAA+LGA A+I + T ++ C P Sbjct: 2 YDLVVIGAGSGGVRAARVAAQLGAKVAIIEERFYGGTCVNVGCVP 46 >gi|294101107|ref|YP_003552965.1| glucose-inhibited division protein A [Aminobacterium colombiense DSM 12261] gi|293616087|gb|ADE56241.1| glucose-inhibited division protein A [Aminobacterium colombiense DSM 12261] Length = 460 Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust. Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 15/90 (16%) Query: 307 PNGISTALPEEIQHQF-IRTIPGLEKVNIIRPG--------YAIEYDYINPK-ELFPTLE 356 P +S LP H+F I + +E +NII PG Y +E + + EL TLE Sbjct: 367 PGDLSLVLP----HRFLIDVVEFIEALNIIMPGINMNDTLLYGVEIKLYSLRLELKETLE 422 Query: 357 TKKISGLFLAGQINGTT-GYEEAAAQGLVA 385 T I L++AG G + G +AA+ G+VA Sbjct: 423 TPAIRNLYMAGDGAGVSRGIIQAASSGVVA 452 >gi|160902043|ref|YP_001567624.1| thioredoxin reductase [Petrotoga mobilis SJ95] gi|160359687|gb|ABX31301.1| thioredoxin reductase [Petrotoga mobilis SJ95] Length = 340 Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust. Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAI 50 I + YDV++IGGG AG AA A + GAST L+ K G M+ I Sbjct: 14 IKQQYDVVIIGGGPAGISAAIYALQGGAST-LVIEKAIEGGQMNLTDII 61 >gi|317487511|ref|ZP_07946294.1| FAD dependent oxidoreductase [Bilophila wadsworthia 3_1_6] gi|316921236|gb|EFV42539.1| FAD dependent oxidoreductase [Bilophila wadsworthia 3_1_6] Length = 467 Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust. Identities = 37/115 (32%), Positives = 53/115 (46%), Gaps = 17/115 (14%) Query: 291 HQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKE 350 H ++EP V P I+ ALP I + GLE++N++ PG A + + E Sbjct: 355 HNGYVEP---TLTEVTPGDIAMALPGRIVTNLVE---GLEQLNLVVPGIADDSTLLYAPE 408 Query: 351 L--FPT-------LETKKISGLFLAGQINGTTG-YEEAAAQGLVAGINSARKSNK 395 + F T LET +S LF+AG G +G AAA G++ RK K Sbjct: 409 IKFFSTQVATSSDLET-SVSNLFVAGDGPGVSGNIVSAAATGIIPAKAIVRKFGK 462 >gi|291534237|emb|CBL07350.1| dihydrolipoamide dehydrogenase [Megamonas hypermegale ART12/1] Length = 453 Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 9/82 (10%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALI--THKTSTIGSMSCNPAIGGLGKGHLVREI 62 ++D+ +IG G AG EAA AAK G TALI + T + C P L L RE Sbjct: 3 NFDLAIIGAGPAGYEAAVFAAKQGLKTALIEKSELGGTCLNNGCIPTKTLLHTADLYRE- 61 Query: 63 DALDGLMGRVADAAGIQFRVLN 84 M AD G+ ++ L+ Sbjct: 62 ------MTNQADIIGLDYQALS 77 >gi|309776815|ref|ZP_07671789.1| hypothetical protein HMPREF0983_02392 [Erysipelotrichaceae bacterium 3_1_53] gi|308915563|gb|EFP61329.1| hypothetical protein HMPREF0983_02392 [Erysipelotrichaceae bacterium 3_1_53] Length = 420 Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 28/57 (49%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 YDVIV+GGG AG +A A K GA LI + +G + G G H E+ Sbjct: 3 YDVIVVGGGPAGLASALEAWKQGAKHILILERDQELGGILNQCIHNGFGLHHFKEEL 59 >gi|321263197|ref|XP_003196317.1| dihydrolipoyl dehydrogenase [Cryptococcus gattii WM276] gi|54112177|gb|AAV28779.1| LPD1p [Cryptococcus gattii] gi|317462792|gb|ADV24530.1| dihydrolipoyl dehydrogenase, putative [Cryptococcus gattii WM276] Length = 511 Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust. Identities = 42/154 (27%), Positives = 72/154 (46%), Gaps = 13/154 (8%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGS---MSCNPAIGGLGKGHLVREI 62 YDV++IGGG G AA AA+LG TA I + + G+ + C P+ L H+ + Sbjct: 47 YDVVIIGGGPGGYVAAIKAAQLGFKTACIEKRGALGGTCLNVGCIPSKAMLNNSHIFHQT 106 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 L R D +G+Q LN+ K A + +A + ++ + + +D I+G Sbjct: 107 Q--HDLKNRGIDVSGVQ---LNLPKMLAAK----EASVKALTGGIETYLFKKNGIDYIKG 157 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGT 156 E A F T + ++ + + V++ TG+ Sbjct: 158 E-ASFETANKLSVKLLEGGETQVEAKNVIIATGS 190 >gi|54112143|gb|AAV28746.1| LPD1p [Cryptococcus gattii] Length = 511 Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust. Identities = 42/154 (27%), Positives = 72/154 (46%), Gaps = 13/154 (8%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGS---MSCNPAIGGLGKGHLVREI 62 YDV++IGGG G AA AA+LG TA I + + G+ + C P+ L H+ + Sbjct: 47 YDVVIIGGGPGGYVAAIKAAQLGFKTACIEKRGALGGTCLNVGCIPSKAMLNNSHIFHQT 106 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 L R D +G+Q LN+ K A + +A + ++ + + +D I+G Sbjct: 107 Q--HDLKNRGIDVSGVQ---LNLPKMLAAK----EASVKALTGGIETYLFKKNGIDYIKG 157 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGT 156 E A F T + ++ + + V++ TG+ Sbjct: 158 E-ASFETANKLSVKLLEGGETQVEAKNVIIATGS 190 >gi|325694538|gb|EGD36447.1| dihydrolipoyl dehydrogenase [Streptococcus sanguinis SK150] Length = 461 Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 2/56 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKT--STIGSMSCNPAIGGLGKGHLV 59 YDV++IG G G AA AA+LG A++ K+ T ++ C P+ L GH + Sbjct: 19 YDVLIIGAGPGGYVAAEEAARLGKKVAVVEKKSIGGTCLNVGCIPSKAYLQHGHWL 74 >gi|327470073|gb|EGF15537.1| dihydrolipoyl dehydrogenase [Streptococcus sanguinis SK330] Length = 446 Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 2/56 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKT--STIGSMSCNPAIGGLGKGHLV 59 YDV++IG G G AA AA+LG A++ K+ T ++ C P+ L GH + Sbjct: 4 YDVLIIGAGPGGYVAAEEAARLGKKVAVVEKKSIGGTCLNVGCIPSKAYLQHGHWL 59 >gi|315301758|ref|ZP_07872813.1| coenzyme A disulfide reductase LpdA [Listeria ivanovii FSL F6-596] gi|313629872|gb|EFR97950.1| coenzyme A disulfide reductase LpdA [Listeria ivanovii FSL F6-596] Length = 488 Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust. Identities = 58/196 (29%), Positives = 91/196 (46%), Gaps = 37/196 (18%) Query: 205 DGKTI--IWDKTEKQFADERLIPFSFM---TDKITNRQIECGITRTNLETHRIIMENIKH 259 DGK I +WD +K++ + +I + + TD I IE GI++ + + NI H Sbjct: 156 DGKQISAVWDNQQKEYQTDMIILAAGVMPNTDLIARTGIELGISKA-ISVDEQMQTNIPH 214 Query: 260 -SAIYSGDI-KSYG-----PRYCP--SIEDKIVRFGERNGHQIFLEPEG-LNTDV--VYP 307 SA+ GD+ +SY P Y P S +K+ R + L+ +G L T + V+ Sbjct: 215 ISAV--GDVAESYSLITGKPLYRPLGSTANKMGRIAGDSLTGGSLKHQGILGTGIIRVFD 272 Query: 308 NGIS-TALPEEIQHQFIRTIPGLEKVNI-----IRPGYAIEYDYINPKELFPTLETKKIS 361 ++ T L E+ H+ E ++I I+P A DY+ KEL K S Sbjct: 273 TAVAYTGLTEQEAHE--------EGIDIEVLYNIKPDKA---DYLGGKELTIKAIAAKES 321 Query: 362 GLFLAGQINGTTGYEE 377 G L QI GT+G ++ Sbjct: 322 GRILGAQIIGTSGVDK 337 >gi|313900349|ref|ZP_07833843.1| pyridine nucleotide-disulfide oxidoreductase [Clostridium sp. HGF2] gi|312954898|gb|EFR36572.1| pyridine nucleotide-disulfide oxidoreductase [Clostridium sp. HGF2] Length = 420 Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 28/57 (49%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 YDVIV+GGG AG +A A K GA LI + +G + G G H E+ Sbjct: 3 YDVIVVGGGPAGLASALEAWKQGAKHILILERDQELGGILNQCIHNGFGLHHFKEEL 59 >gi|324992939|gb|EGC24859.1| dihydrolipoyl dehydrogenase [Streptococcus sanguinis SK405] gi|324994434|gb|EGC26347.1| dihydrolipoyl dehydrogenase [Streptococcus sanguinis SK678] gi|325687431|gb|EGD29452.1| dihydrolipoyl dehydrogenase [Streptococcus sanguinis SK72] gi|327462235|gb|EGF08562.1| dihydrolipoyl dehydrogenase [Streptococcus sanguinis SK1] gi|327489590|gb|EGF21382.1| dihydrolipoyl dehydrogenase [Streptococcus sanguinis SK1058] Length = 461 Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 2/56 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKT--STIGSMSCNPAIGGLGKGHLV 59 YDV++IG G G AA AA+LG A++ K+ T ++ C P+ L GH + Sbjct: 19 YDVLIIGAGPGGYVAAEEAARLGKKVAVVEKKSIGGTCLNVGCIPSKAYLQHGHWL 74 >gi|313126948|ref|YP_004037218.1| thioredoxin reductase [Halogeometricum borinquense DSM 11551] gi|312293313|gb|ADQ67773.1| thioredoxin reductase [Halogeometricum borinquense DSM 11551] Length = 355 Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust. Identities = 17/30 (56%), Positives = 22/30 (73%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALI 34 SYDV+VIGGG AG + A A+LG TA++ Sbjct: 9 SYDVVVIGGGPAGLQTALYTARLGHDTAVV 38 >gi|317484343|ref|ZP_07943264.1| NADH flavin oxidoreductase/NADH oxidase [Bilophila wadsworthia 3_1_6] gi|316924421|gb|EFV45586.1| NADH flavin oxidoreductase/NADH oxidase [Bilophila wadsworthia 3_1_6] Length = 628 Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust. Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 1/38 (2%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMS 45 V+VIGGG AGCEAA AA+ G L TST+G ++ Sbjct: 371 VVVIGGGPAGCEAALTAAQRGHKVVLF-EATSTLGGLA 407 >gi|326799971|ref|YP_004317790.1| dihydrolipoyl dehydrogenase [Sphingobacterium sp. 21] gi|326550735|gb|ADZ79120.1| Dihydrolipoyl dehydrogenase [Sphingobacterium sp. 21] Length = 463 Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust. Identities = 43/158 (27%), Positives = 60/158 (37%), Gaps = 21/158 (13%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKT--STIGSMSCNPAIGGLGKGHLVRE 61 R YD IVIG G AG A A G A+I + T + C P K + Sbjct: 4 RQYDAIVIGSGQAGVPLAKKLANHGKKVAIIEKRWIGGTCVNDGCTPT-----KTWIASA 58 Query: 62 IDALDGL----MGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENL 117 A D +G + A I ++ +K V R+ Q+ + S +NL Sbjct: 59 KAAYDAHKSTELGVFVEDAKIDMTIIKKRKDKIVENARS---------GNQKALESTKNL 109 Query: 118 DVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTG 155 DVI GE A F K I + +++ L TG Sbjct: 110 DVIFGE-AAFTDFKTIGVTSDTGSQQIMKADLFFLNTG 146 >gi|307305063|ref|ZP_07584812.1| glucose-inhibited division protein A [Sinorhizobium meliloti BL225C] gi|306902403|gb|EFN32998.1| glucose-inhibited division protein A [Sinorhizobium meliloti BL225C] Length = 450 Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust. Identities = 22/48 (45%), Positives = 27/48 (56%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIG 51 R DVIV+GGG AG AA AAK G S L + + G++ PA G Sbjct: 2 READVIVVGGGPAGVSAAIEAAKSGLSVMLCEQRPALGGAIHRQPAEG 49 >gi|317970560|ref|ZP_07971950.1| dihydrolipoamide dehydrogenase [Synechococcus sp. CB0205] Length = 480 Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust. Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 2/77 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKT--STIGSMSCNPAIGGLGKGHLVREID 63 +DVIVIG G+ G +AA AA+ G TA+I + T + C P+ L VRE+ Sbjct: 8 FDVIVIGAGYGGFDAAKHAAEHGLRTAIIESRDMGGTCVNRGCVPSKALLAASGRVRELA 67 Query: 64 ALDGLMGRVADAAGIQF 80 + L G AA ++F Sbjct: 68 DAEHLKGFGIHAAPVRF 84 >gi|325696467|gb|EGD38357.1| dihydrolipoyl dehydrogenase [Streptococcus sanguinis SK160] Length = 461 Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 2/56 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKT--STIGSMSCNPAIGGLGKGHLV 59 YDV++IG G G AA AA+LG A++ K+ T ++ C P+ L GH + Sbjct: 19 YDVLIIGAGPGGYVAAEEAARLGKKVAVVEKKSIGGTCLNVGCIPSKAYLQHGHWL 74 >gi|320581155|gb|EFW95376.1| Dihydrolipoamide dehydrogenase [Pichia angusta DL-1] Length = 632 Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 3/62 (4%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGS---MSCNPAIGGLGKGHLVR 60 + +D++VIGGG G AA AA+LG TA + + G+ + C P+ L HL Sbjct: 165 KKHDILVIGGGPGGYVAAIKAAQLGFDTACVEKRGRLGGTCLNVGCIPSKALLNNSHLFH 224 Query: 61 EI 62 +I Sbjct: 225 QI 226 >gi|296390607|ref|ZP_06880082.1| putative penicillin amidase [Pseudomonas aeruginosa PAb1] Length = 847 Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust. Identities = 40/156 (25%), Positives = 67/156 (42%), Gaps = 17/156 (10%) Query: 262 IYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYP---NGISTALPEEI 318 +Y+ + +Y RY + + + G R + +PE ++ +V+ G++ L EE+ Sbjct: 144 VYARGVNAYLYRYRDKLPMDLAQSGYR---PEYWKPE--DSALVFALLNFGLAVNLQEEV 198 Query: 319 QHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEA 378 + G +K+ + P Y P E P E +K+ GL L GQ+ G G E A Sbjct: 199 ASLTLAQKVGSDKLAWLTPTY--------PDENLPFDEAEKLKGLRLDGQVPGLAGVEGA 250 Query: 379 AAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDD 414 A Q + SN I R+ S +M +D Sbjct: 251 ARQVAALSMLGVAASNNW-AIAPQRSRSGKSLMAND 285 >gi|332701255|ref|ZP_08421343.1| Dihydrolipoyl dehydrogenase [Desulfovibrio africanus str. Walvis Bay] gi|332551404|gb|EGJ48448.1| Dihydrolipoyl dehydrogenase [Desulfovibrio africanus str. Walvis Bay] Length = 488 Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust. Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 3/52 (5%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGS---MSCNPA 49 M + YD+ VIGGG AG AA AA+LGA T L+ + + G C P+ Sbjct: 1 MADYDYDIGVIGGGSAGLTVAAGAAQLGAKTLLVEKEKALGGDCLHYGCVPS 52 >gi|326795830|ref|YP_004313650.1| Soluble pyridine nucleotide transhydrogenase [Marinomonas mediterranea MMB-1] gi|326546594|gb|ADZ91814.1| Soluble pyridine nucleotide transhydrogenase [Marinomonas mediterranea MMB-1] Length = 464 Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust. Identities = 25/66 (37%), Positives = 32/66 (48%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M R YDV+V+G G AG AA AAK G A++ GS + I H V+ Sbjct: 1 MTTRHYDVVVLGTGPAGEGAAMNAAKAGKRVAVVEASPKVGGSCTHLGTIPSKALRHAVK 60 Query: 61 EIDALD 66 EI A + Sbjct: 61 EIIAFN 66 >gi|134300053|ref|YP_001113549.1| hypothetical protein Dred_2209 [Desulfotomaculum reducens MI-1] gi|134052753|gb|ABO50724.1| HI0933 family protein [Desulfotomaculum reducens MI-1] Length = 430 Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust. Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 1/41 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIG 42 ++R YD++V+GGG AG AAA +A LGA L+ K + +G Sbjct: 3 LHRDYDILVVGGGPAGMMAAARSATLGARV-LLLEKNNCLG 42 >gi|313105983|ref|ZP_07792244.1| putative penicillin amidase [Pseudomonas aeruginosa 39016] gi|310878746|gb|EFQ37340.1| putative penicillin amidase [Pseudomonas aeruginosa 39016] Length = 847 Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust. Identities = 40/156 (25%), Positives = 67/156 (42%), Gaps = 17/156 (10%) Query: 262 IYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYP---NGISTALPEEI 318 +Y+ + +Y RY + + + G R + +PE ++ +V+ G++ L EE+ Sbjct: 144 VYARGVNAYLYRYRDKLPMDLAQSGYR---PEYWKPE--DSALVFALLNFGLAVNLQEEV 198 Query: 319 QHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEA 378 + G +K+ + P Y P E P E +K+ GL L GQ+ G G E A Sbjct: 199 ASLTLAQKVGSDKLAWLTPTY--------PDENLPFDEAEKLKGLRLDGQVPGLAGVEGA 250 Query: 379 AAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDD 414 A Q + SN I R+ S +M +D Sbjct: 251 ARQVAALSMLGVAASNNW-AIAPQRSRSGKSLMAND 285 >gi|256378252|ref|YP_003101912.1| monooxygenase FAD-binding [Actinosynnema mirum DSM 43827] gi|255922555|gb|ACU38066.1| monooxygenase FAD-binding [Actinosynnema mirum DSM 43827] Length = 429 Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 10/64 (15%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMS--CN--------PAIGGLG 54 S+DV+V+GG AGC A +++G AL+ KT G C P + GLG Sbjct: 21 SWDVVVVGGSIAGCATAIRFSRMGHRVALLDRKTMDDGHHKRLCTHFIQPHAVPLLAGLG 80 Query: 55 KGHL 58 HL Sbjct: 81 LDHL 84 >gi|257453549|ref|ZP_05618839.1| dihydrolipoyl dehydrogenase [Enhydrobacter aerosaccus SK60] gi|257449007|gb|EEV23960.1| dihydrolipoyl dehydrogenase [Enhydrobacter aerosaccus SK60] Length = 482 Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 5/51 (9%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGG 52 + SYD+++IGGG G EAA A +LG S A I + + PA+GG Sbjct: 1 MKESYDLVIIGGGPGGYEAAIRAGQLGMSVACIEKRIN-----KGEPALGG 46 >gi|157874347|ref|XP_001685657.1| dihydrolipoamide dehydrogenase [Leishmania major strain Friedlin] gi|68128729|emb|CAJ08862.1| putative dihydrolipoamide dehydrogenase [Leishmania major strain Friedlin] Length = 476 Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust. Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 4/92 (4%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGS---MSCNPAIGGLGKGHLVRE 61 SYDV VIGGG G AA AA+LG TA I + + G+ + C P+ L HL + Sbjct: 11 SYDVTVIGGGPGGYVAAIKAAQLGLKTACIEKRGALGGTCLNVGCIPSKALLHATHLYHD 70 Query: 62 IDALDGLMG-RVADAAGIQFRVLNVKKGPAVR 92 A G R + + + +KG V+ Sbjct: 71 AHANFAQYGLRGGENVTMDVSAMQAQKGKGVK 102 >gi|282890645|ref|ZP_06299168.1| hypothetical protein pah_c022o267 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281499642|gb|EFB41938.1| hypothetical protein pah_c022o267 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 467 Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust. Identities = 23/45 (51%), Positives = 27/45 (60%), Gaps = 1/45 (2%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCN 47 N S+DV+VIG G G AA AA+LG TA I K ST+G N Sbjct: 4 NTSFDVVVIGSGPGGYVAAIRAAQLGFKTACI-EKDSTLGGTCLN 47 >gi|254447443|ref|ZP_05060909.1| dihydrolipoyl dehydrogenase [gamma proteobacterium HTCC5015] gi|198262786|gb|EDY87065.1| dihydrolipoyl dehydrogenase [gamma proteobacterium HTCC5015] Length = 485 Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust. Identities = 18/33 (54%), Positives = 25/33 (75%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALI 34 ++ YDVIVIGGG AG E+A A+LG +TA++ Sbjct: 3 MSEQYDVIVIGGGPAGYESAIRCAQLGLNTAVV 35 >gi|291333334|gb|ADD93041.1| hypothetical protein [uncultured archaeon MedDCM-OCT-S04-C246] Length = 371 Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust. Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 4/60 (6%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 S++V+VIGG A AA A+ GAST LI ++ IGS NP GL + EID+ Sbjct: 3 SWEVVVIGGNPAALRAAISASDGGASTLLI--DSAGIGSRQGNPPYAGLAAS--LGEIDS 58 >gi|260434935|ref|ZP_05788905.1| thioredoxin reductase [Synechococcus sp. WH 8109] gi|260412809|gb|EEX06105.1| thioredoxin reductase [Synechococcus sp. WH 8109] Length = 319 Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust. Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 10/62 (16%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGG AGC A A+ ST ++ NPA+G L H + + Sbjct: 7 FDVIIIGGGPAGCSCALYTARSNLSTIILDK----------NPAVGALAITHKIANYPGV 56 Query: 66 DG 67 +G Sbjct: 57 EG 58 >gi|32475026|ref|NP_868020.1| NADH-dependant oxidoreductase [Rhodopirellula baltica SH 1] gi|32445566|emb|CAD75567.1| similar to NADH-dependant oxidoreductases [Rhodopirellula baltica SH 1] Length = 822 Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust. Identities = 18/49 (36%), Positives = 29/49 (59%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLG 54 YD++V+GGG+AG +A AA++G ALI + G+ S + +G Sbjct: 251 YDLVVVGGGYAGMASAISAARMGCRVALIQDRGVLGGNGSSEVRVWAMG 299 >gi|150015264|ref|YP_001307518.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Clostridium beijerinckii NCIMB 8052] gi|149901729|gb|ABR32562.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Clostridium beijerinckii NCIMB 8052] Length = 318 Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust. Identities = 21/53 (39%), Positives = 28/53 (52%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHL 58 Y++I+IG G AG AA AA+ G + LI K S +G + G GK L Sbjct: 4 YELIIIGAGIAGMTAALGAAREGITKILIIEKESNVGGIINQCVHNGFGKNFL 56 >gi|160879688|ref|YP_001558656.1| dihydrolipoamide dehydrogenase [Clostridium phytofermentans ISDg] gi|160428354|gb|ABX41917.1| dihydrolipoamide dehydrogenase [Clostridium phytofermentans ISDg] Length = 470 Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 2/63 (3%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKT--STIGSMSCNPAIGGLGKGHLV 59 + + YD++VIG G G AA AAKLG TA+I ++ T + C PA L L Sbjct: 1 MEKIYDLLVIGAGPGGYVAAIKAAKLGMKTAVIENREVGGTCLNRGCVPAKAMLHAAKLY 60 Query: 60 REI 62 +E+ Sbjct: 61 QEV 63 >gi|93004944|ref|YP_579381.1| dihydrolipoamide dehydrogenase [Psychrobacter cryohalolentis K5] gi|92392622|gb|ABE73897.1| dihydrolipoamide dehydrogenase [Psychrobacter cryohalolentis K5] Length = 483 Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust. Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 5/48 (10%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGG 52 SYD++VIGGG G EAA A +LG S A I + PA+GG Sbjct: 4 SYDLVVIGGGPGGYEAAIRAGQLGMSVACIEKRV-----YKGEPALGG 46 >gi|76802915|ref|YP_331010.1| electron-transferring-flavoprotein dehydrogenase 2 [Natronomonas pharaonis DSM 2160] gi|76558780|emb|CAI50373.1| predicted electron-transferring-flavoprotein dehydrogenase 2 [Natronomonas pharaonis DSM 2160] Length = 457 Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust. Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 1/53 (1%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGS-MSCNPAIGG 52 M SYD++V+GGG AGC AAA AA+ G L+ K+ G ++C AI G Sbjct: 1 MPPESYDIVVVGGGTAGCFAAATAAQNGLDVVLLERKSEEEGGHIACGDAIKG 53 >gi|87125511|ref|ZP_01081356.1| putative dihydrolipoamide dehydrogenase [Synechococcus sp. RS9917] gi|86166811|gb|EAQ68073.1| putative dihydrolipoamide dehydrogenase [Synechococcus sp. RS9917] Length = 480 Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust. Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 2/77 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKT--STIGSMSCNPAIGGLGKGHLVREID 63 +DVIVIG G+ G +AA AA+ G A+I + T + C P+ L VRE+ Sbjct: 8 FDVIVIGAGYGGFDAAKHAAEHGLKVAIIETRDMGGTCVNRGCVPSKALLAASGRVRELA 67 Query: 64 ALDGLMGRVADAAGIQF 80 D L G AA ++F Sbjct: 68 DADHLAGFGIHAAPVRF 84 >gi|290996402|ref|XP_002680771.1| predicted protein [Naegleria gruberi] gi|284094393|gb|EFC48027.1| predicted protein [Naegleria gruberi] Length = 468 Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust. Identities = 19/39 (48%), Positives = 27/39 (69%), Gaps = 1/39 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITH-KTSTIGS 43 YD+IV+GGG G + + +AA LGA AL+ + K S+ GS Sbjct: 7 YDLIVVGGGSGGLKCSKLAADLGAKVALLDYVKPSSQGS 45 >gi|222479834|ref|YP_002566071.1| geranylgeranyl reductase [Halorubrum lacusprofundi ATCC 49239] gi|222452736|gb|ACM57001.1| geranylgeranyl reductase [Halorubrum lacusprofundi ATCC 49239] Length = 456 Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTS-TIGSMSCNPAIGG 52 YDV+V G G AGC AAA A G ++ K + G ++C A+ G Sbjct: 6 YDVVVAGAGTAGCYAAATIANEGLDVVIVERKDAEEAGHIACGDALKG 53 >gi|327541356|gb|EGF27897.1| Glucose-inhibited division protein A-related protein [Rhodopirellula baltica WH47] Length = 807 Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust. Identities = 18/49 (36%), Positives = 29/49 (59%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLG 54 YD++V+GGG+AG +A AA++G ALI + G+ S + +G Sbjct: 236 YDLVVVGGGYAGMASAISAARMGCRVALIQDRGVLGGNGSSEVRVWAMG 284 >gi|319947063|ref|ZP_08021297.1| dihydrolipoamide dehydrogenase component E3 [Streptococcus australis ATCC 700641] gi|319747111|gb|EFV99370.1| dihydrolipoamide dehydrogenase component E3 [Streptococcus australis ATCC 700641] Length = 568 Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust. Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 2/45 (4%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCN 47 + +YD++VIGGG AG AA AA+LG AL+ + S +G N Sbjct: 110 DDAYDIVVIGGGPAGYVAAIKAAQLGGKVALV--EKSELGGTCLN 152 >gi|300783978|ref|YP_003764269.1| oxidoreductase [Amycolatopsis mediterranei U32] gi|299793492|gb|ADJ43867.1| oxidoreductase [Amycolatopsis mediterranei U32] Length = 512 Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust. Identities = 17/39 (43%), Positives = 25/39 (64%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGS 43 SYDV+++GGGH G AAA A+ G S ++ + T G+ Sbjct: 3 SYDVVIVGGGHNGLVAAAYLARAGRSVLVLERREETGGA 41 >gi|85057419|ref|YP_456335.1| dihydrolipoamide dehydrogenase [Aster yellows witches'-broom phytoplasma AYWB] gi|84789524|gb|ABC65256.1| dihydrolipoamide dehydrogenase [Aster yellows witches'-broom phytoplasma AYWB] Length = 457 Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 2/61 (3%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALI-THKTSTIG-SMSCNPAIGGLGKGHLVRE 61 ++YDV+VIGGG G AA AA++GA AL+ HK I + C P L + ++ Sbjct: 2 KNYDVLVIGGGPGGYVAAIKAAQIGAKVALVEKHKLGGICLNYGCIPTKAYLKSAKIYKD 61 Query: 62 I 62 I Sbjct: 62 I 62 >gi|39939089|ref|NP_950855.1| fatty acid/phospholipid biosynthesis enzyme [Onion yellows phytoplasma OY-M] gi|39722198|dbj|BAD04688.1| fatty acid/phospholipid biosynthesis enzyme [Onion yellows phytoplasma OY-M] Length = 457 Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 2/61 (3%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALI-THKTSTIG-SMSCNPAIGGLGKGHLVRE 61 ++YDV+VIGGG G AA AA++GA AL+ HK I + C P L + ++ Sbjct: 2 KNYDVLVIGGGPGGYVAAIKAAQMGAKVALVEKHKLGGICLNYGCIPTKAYLKSAKMYKD 61 Query: 62 I 62 I Sbjct: 62 I 62 >gi|71064685|ref|YP_263412.1| dihydrolipoamide dehydrogenase [Psychrobacter arcticus 273-4] gi|71037670|gb|AAZ17978.1| dihydrolipoamide dehydrogenase [Psychrobacter arcticus 273-4] Length = 483 Score = 37.4 bits (85), Expect = 7.8, Method: Compositional matrix adjust. Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 5/48 (10%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGG 52 SYD++VIGGG G EAA A +LG S A I + PA+GG Sbjct: 4 SYDLVVIGGGPGGYEAAIRAGQLGMSVACIEKRV-----YKGEPALGG 46 >gi|332304741|ref|YP_004432592.1| FAD dependent oxidoreductase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172070|gb|AEE21324.1| FAD dependent oxidoreductase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 523 Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust. Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 2/71 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +N SYDVIV+GGGH G +A A+ G L+ IG MS + + H++ Sbjct: 1 MNNSYDVIVVGGGHNGLVSACYLAEEGKKV-LVLEAADKIGGMSASGYLIPEAPEHMIHS 59 Query: 62 IDALDGLMGRV 72 ALD + RV Sbjct: 60 C-ALDLMSLRV 69 >gi|326561810|gb|EGE12145.1| dihydrolipoamide dehydrogenase [Moraxella catarrhalis 7169] gi|326568965|gb|EGE19034.1| dihydrolipoamide dehydrogenase [Moraxella catarrhalis BC1] Length = 482 Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 5/51 (9%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGG 52 + SYD++VIGGG G EAA A+LG S A I + PA+GG Sbjct: 1 MKNSYDLVVIGGGPGGYEAAIRGAQLGFSVACIEKRVH-----KGEPALGG 46 >gi|326569264|gb|EGE19325.1| dihydrolipoamide dehydrogenase [Moraxella catarrhalis BC7] Length = 482 Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 5/51 (9%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGG 52 + SYD++VIGGG G EAA A+LG S A I + PA+GG Sbjct: 1 MKNSYDLVVIGGGPGGYEAAIRGAQLGFSVACIEKRVH-----KGEPALGG 46 >gi|296112302|ref|YP_003626240.1| pyruvate dehydrogenase E3 component (dihydrolipoamide dehydrogenase) [Moraxella catarrhalis RH4] gi|295919996|gb|ADG60347.1| pyruvate dehydrogenase E3 component (dihydrolipoamide dehydrogenase) [Moraxella catarrhalis RH4] gi|326563246|gb|EGE13513.1| dihydrolipoamide dehydrogenase [Moraxella catarrhalis 46P47B1] gi|326563360|gb|EGE13625.1| dihydrolipoamide dehydrogenase [Moraxella catarrhalis 12P80B1] gi|326565898|gb|EGE16059.1| dihydrolipoamide dehydrogenase [Moraxella catarrhalis 103P14B1] gi|326571940|gb|EGE21945.1| dihydrolipoamide dehydrogenase [Moraxella catarrhalis BC8] gi|326575452|gb|EGE25377.1| dihydrolipoamide dehydrogenase [Moraxella catarrhalis 101P30B1] gi|326576460|gb|EGE26368.1| dihydrolipoamide dehydrogenase [Moraxella catarrhalis CO72] gi|326577931|gb|EGE27795.1| dihydrolipoamide dehydrogenase [Moraxella catarrhalis O35E] Length = 482 Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 5/51 (9%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGG 52 + SYD++VIGGG G EAA A+LG S A I + PA+GG Sbjct: 1 MKNSYDLVVIGGGPGGYEAAIRGAQLGFSVACIEKRVH-----KGEPALGG 46 >gi|296133133|ref|YP_003640380.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Thermincola sp. JR] gi|296031711|gb|ADG82479.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Thermincola potens JR] Length = 424 Score = 37.4 bits (85), Expect = 8.1, Method: Compositional matrix adjust. Identities = 18/27 (66%), Positives = 19/27 (70%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI 34 V+VIGGG AGC AA A K GA ALI Sbjct: 3 VVVIGGGWAGCSAAYFAKKAGAEVALI 29 >gi|91791107|ref|YP_552057.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Polaromonas sp. JS666] gi|91700988|gb|ABE47159.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Polaromonas sp. JS666] Length = 405 Score = 37.4 bits (85), Expect = 8.3, Method: Compositional matrix adjust. Identities = 17/43 (39%), Positives = 29/43 (67%), Gaps = 1/43 (2%) Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAI 50 +++IGGG+ G E AAVAAKLG + ++ + + ++C PA+ Sbjct: 147 LVLIGGGYVGLEIAAVAAKLGLAVTVLEAAPTVLARVTC-PAV 188 >gi|305664128|ref|YP_003860416.1| Thioredoxin-disulfide reductase [Ignisphaera aggregans DSM 17230] gi|304378697|gb|ADM28536.1| Thioredoxin-disulfide reductase [Ignisphaera aggregans DSM 17230] Length = 327 Score = 37.4 bits (85), Expect = 8.3, Method: Compositional matrix adjust. Identities = 18/31 (58%), Positives = 22/31 (70%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALIT 35 SYDV++IGGG AG AA A+ G TA+IT Sbjct: 5 SYDVVIIGGGIAGFSAALYTARQGLKTAVIT 35 >gi|318040409|ref|ZP_07972365.1| dihydrolipoamide dehydrogenase [Synechococcus sp. CB0101] Length = 480 Score = 37.4 bits (85), Expect = 8.5, Method: Compositional matrix adjust. Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 2/77 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKT--STIGSMSCNPAIGGLGKGHLVREID 63 +DVIVIG G+ G +AA AA+ G TA+I + T + C P+ L VRE+ Sbjct: 8 FDVIVIGAGYGGFDAAKHAAEHGLRTAIIESRDMGGTCVNRGCVPSKALLAASGRVRELA 67 Query: 64 ALDGLMGRVADAAGIQF 80 + L G AA ++F Sbjct: 68 DAEHLKGFGIHAAPVRF 84 >gi|307318181|ref|ZP_07597617.1| glucose-inhibited division protein A [Sinorhizobium meliloti AK83] gi|306896222|gb|EFN26972.1| glucose-inhibited division protein A [Sinorhizobium meliloti AK83] Length = 450 Score = 37.4 bits (85), Expect = 8.6, Method: Compositional matrix adjust. Identities = 21/48 (43%), Positives = 27/48 (56%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIG 51 R D+IV+GGG AG AA AAK G S L + + G++ PA G Sbjct: 2 READIIVVGGGPAGVSAAIEAAKSGLSVMLCEQRPALGGAIHRQPAEG 49 >gi|163742427|ref|ZP_02149814.1| hypothetical protein RG210_01315 [Phaeobacter gallaeciensis 2.10] gi|161384377|gb|EDQ08759.1| hypothetical protein RG210_01315 [Phaeobacter gallaeciensis 2.10] Length = 436 Score = 37.4 bits (85), Expect = 8.7, Method: Compositional matrix adjust. Identities = 19/43 (44%), Positives = 26/43 (60%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCN 47 S D++V+GGG+ GC AA AA+LGA L+ +T G N Sbjct: 31 SADLVVVGGGYTGCSAALRAAELGADVRLLEAETFGAGGSGRN 73 >gi|86742562|ref|YP_482962.1| soluble pyridine nucleotide transhydrogenase [Frankia sp. CcI3] gi|86569424|gb|ABD13233.1| pyridine nucleotide-disulphide oxidoreductase dimerisation region [Frankia sp. CcI3] Length = 470 Score = 37.4 bits (85), Expect = 8.7, Method: Compositional matrix adjust. Identities = 21/42 (50%), Positives = 26/42 (61%), Gaps = 1/42 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCN 47 YDV+VIG G G +AA AAKLG A++ K IG +S N Sbjct: 4 YDVLVIGSGPGGQKAAIAAAKLGRRVAIV-DKREMIGGVSIN 44 >gi|332293610|ref|YP_004432219.1| dihydrolipoamide dehydrogenase [Krokinobacter diaphorus 4H-3-7-5] gi|332171696|gb|AEE20951.1| dihydrolipoamide dehydrogenase [Krokinobacter diaphorus 4H-3-7-5] Length = 465 Score = 37.4 bits (85), Expect = 8.8, Method: Compositional matrix adjust. Identities = 46/156 (29%), Positives = 70/156 (44%), Gaps = 18/156 (11%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIG----SMSCNPAIGGLGKGHLVR 60 SYDV VIG G G AA A+LG TA+I K ST+G ++ C P+ L H Sbjct: 3 SYDVAVIGSGPGGYVAAIRCAQLGMKTAII-EKYSTLGGTCLNVGCIPSKALLDSSHHYE 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 DA+ D + LN++K + R Q + ++ ++ + N+DV Sbjct: 62 --DAIKHFEDHGIDVGEVS---LNLEKMIS----RKQGVVDTTTKGIEF-LMGKNNIDVY 111 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGT 156 QG V F +I +I + N I ++ TG+ Sbjct: 112 QG-VGSFKDATHI--NIAGEKNETIEAKNTIIATGS 144 >gi|299132692|ref|ZP_07025887.1| mercuric reductase [Afipia sp. 1NLS2] gi|298592829|gb|EFI53029.1| mercuric reductase [Afipia sp. 1NLS2] Length = 754 Score = 37.4 bits (85), Expect = 8.8, Method: Compositional matrix adjust. Identities = 26/62 (41%), Positives = 33/62 (53%), Gaps = 4/62 (6%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R+YD++VIG G AG A+ AA GA ALI TIG N IG + L+R + Sbjct: 291 RAYDLVVIGAGSAGFSASITAADQGAQVALI--GAGTIGGTCVN--IGCVPSKTLIRAAE 346 Query: 64 AL 65 L Sbjct: 347 TL 348 >gi|297620212|ref|YP_003708317.1| geranylgeranyl reductase [Methanococcus voltae A3] gi|297379189|gb|ADI37344.1| geranylgeranyl reductase [Methanococcus voltae A3] Length = 391 Score = 37.4 bits (85), Expect = 8.8, Method: Compositional matrix adjust. Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 3/51 (5%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGS-MSCNPAI 50 +IN SYDV+VIG G AG A+ A+K+GA T L+ K+ IG + C A+ Sbjct: 4 LIN-SYDVVVIGAGPAGSMASYNASKMGAKT-LLVEKSQEIGEPVRCAEAV 52 >gi|78186657|ref|YP_374700.1| dihydrolipoamide dehydrogenase [Chlorobium luteolum DSM 273] gi|78166559|gb|ABB23657.1| dihydrolipoamide dehydrogenase [Chlorobium luteolum DSM 273] Length = 472 Score = 37.4 bits (85), Expect = 8.8, Method: Compositional matrix adjust. Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 14/158 (8%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R DV VIG G G EAA +AA++G ALI + S +G + N G + L+R + Sbjct: 14 RKVDVAVIGSGPGGYEAALLAARMGMQVALI--EKSALGGVCVN--WGCIPTKALLRSAE 69 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 A D + R A G+ + + AV+ RT + + Q L + ++V+ GE Sbjct: 70 AFD--LVRKGAALGLHAPGASFELAAAVKRSRTVVLKISKGIEYQ---LRKAGVEVVPGE 124 Query: 124 V--AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLR 159 AG + E +II + D I ++++ TG +R Sbjct: 125 ARFAGPH-ELDIIREGAVADT--ITARSIIIATGGRMR 159 >gi|111225497|ref|YP_716291.1| soluble pyridine nucleotide transhydrogenase [Frankia alni ACN14a] gi|111153029|emb|CAJ64776.1| soluble pyridine nucleotide transhydrogenase [Frankia alni ACN14a] Length = 513 Score = 37.0 bits (84), Expect = 8.8, Method: Compositional matrix adjust. Identities = 21/42 (50%), Positives = 26/42 (61%), Gaps = 1/42 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCN 47 YDV+VIG G G +AA AAKLG A++ K IG +S N Sbjct: 48 YDVLVIGSGPGGQKAAIAAAKLGRRVAIV-DKREMIGGVSIN 88 >gi|78044723|ref|YP_358935.1| fumarate reductase, flavoprotein subunit [Carboxydothermus hydrogenoformans Z-2901] gi|77996838|gb|ABB15737.1| fumarate reductase, flavoprotein subunit [Carboxydothermus hydrogenoformans Z-2901] Length = 569 Score = 37.0 bits (84), Expect = 8.8, Method: Compositional matrix adjust. Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 9/85 (10%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGA-STALITHKTSTIGSMSC-----NPAIGGLGKGHLV 59 YDV+VIG G AG +AA VAAK G + AL+T T + C N A+ + K + Sbjct: 4 YDVLVIGSGGAGMQAALVAAKSGELNVALMTKVFPTRSATCCAQGGTNAALRNVDKSDSI 63 Query: 60 REIDALDGLMGR--VADAAGIQFRV 82 E A D + G +AD ++F V Sbjct: 64 -EKHAFDTIKGSDFLADQDAVEFFV 87 >gi|326795650|ref|YP_004313470.1| fumarate reductase/succinate dehydrogenase flavoprotein domain protein [Marinomonas mediterranea MMB-1] gi|326546414|gb|ADZ91634.1| fumarate reductase/succinate dehydrogenase flavoprotein domain protein [Marinomonas mediterranea MMB-1] Length = 385 Score = 37.0 bits (84), Expect = 8.9, Method: Compositional matrix adjust. Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 8/122 (6%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITH---KTSTIGS---MSCNPAIGGLGK 55 +N YD+IV+GGG AG A + A+ G + ALI + +G S NP + LG Sbjct: 1 MNTQYDLIVLGGGPAGLAVATLQARQGKTVALIDNSDPHAEKVGESVPASFNPLLKKLGL 60 Query: 56 GHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQR--EILS 113 L E + +++ + G R R Q +++L A+Q E++S Sbjct: 61 PELTDEHHCRIAGSDAYWSGSRVKYDFMLHLNGSDWRLNRRQFEKDLLDAAIQSGVEVVS 120 Query: 114 QE 115 + Sbjct: 121 TQ 122 >gi|153854089|ref|ZP_01995397.1| hypothetical protein DORLON_01388 [Dorea longicatena DSM 13814] gi|149753138|gb|EDM63069.1| hypothetical protein DORLON_01388 [Dorea longicatena DSM 13814] Length = 468 Score = 37.0 bits (84), Expect = 9.0, Method: Compositional matrix adjust. Identities = 25/59 (42%), Positives = 32/59 (54%), Gaps = 2/59 (3%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTS--TIGSMSCNPAIGGLGKGHLVREI 62 YDV+VIG G G AA AAKLG TA+I + + T + C PA + L RE+ Sbjct: 5 YDVVVIGAGPGGYVAAIKAAKLGLKTAIIEERRAGGTCLNRGCIPAKAMIHASSLYREM 63 >gi|146097055|ref|XP_001468025.1| dihydrolipoamide dehydrogenase [Leishmania infantum JPCM5] gi|44804791|gb|AAS47708.1| dihydrolipoamide dehydrogenase [Leishmania major] gi|134072391|emb|CAM71099.1| putative dihydrolipoamide dehydrogenase [Leishmania infantum JPCM5] gi|322501995|emb|CBZ37079.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 476 Score = 37.0 bits (84), Expect = 9.1, Method: Compositional matrix adjust. Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGS---MSCNPAIGGLGKGHLVRE 61 SYDV VIGGG G AA AA+LG TA I + + G+ + C P+ L HL + Sbjct: 11 SYDVTVIGGGPGGYVAAIKAAQLGLKTACIEKRGALGGTCLNVGCIPSKALLHATHLYHD 70 Query: 62 IDA 64 A Sbjct: 71 AHA 73 >gi|327460358|gb|EGF06695.1| acetoin dehydrogenase E3 component, dihydrolipoamide dehydrogenase [Streptococcus sanguinis SK1057] Length = 568 Score = 37.0 bits (84), Expect = 9.1, Method: Compositional matrix adjust. Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 2/45 (4%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCN 47 + +YD++VIGGG AG AA AA+LG AL+ + S +G N Sbjct: 110 DDAYDIVVIGGGPAGYVAAIKAAQLGGKIALV--EKSELGGTCLN 152 >gi|62319084|dbj|BAD94229.1| hypothetical protein [Arabidopsis thaliana] Length = 147 Score = 37.0 bits (84), Expect = 9.2, Method: Composition-based stats. Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 7/102 (6%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAI----GGLGKGHLVR 60 SYD+IV+ GG G EA A + KL G++ +PA+ GL KG + Sbjct: 28 SYDLIVLPGGLGGAEAFASSEKLVNMLKKQAESNKPYGAICASPALVFEPHGLLKG---K 84 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADREL 102 + A + ++ D + I+ RVL RGP T + L Sbjct: 85 KATAFPAMCSKLTDQSHIEHRVLVDGNLITSRGPGTSLEFAL 126 >gi|163739235|ref|ZP_02146647.1| hypothetical protein RGBS107_01385 [Phaeobacter gallaeciensis BS107] gi|161387635|gb|EDQ11992.1| hypothetical protein RGBS107_01385 [Phaeobacter gallaeciensis BS107] Length = 433 Score = 37.0 bits (84), Expect = 9.3, Method: Compositional matrix adjust. Identities = 19/43 (44%), Positives = 26/43 (60%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCN 47 S D++V+GGG+ GC AA AA+LGA L+ +T G N Sbjct: 28 SADLVVVGGGYTGCSAALRAAELGADVRLLEAETFGAGGSGRN 70 >gi|327462211|gb|EGF08538.1| acetoin dehydrogenase E3 component, dihydrolipoamide dehydrogenase [Streptococcus sanguinis SK1] Length = 568 Score = 37.0 bits (84), Expect = 9.4, Method: Compositional matrix adjust. Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 2/45 (4%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCN 47 + +YD++VIGGG AG AA AA+LG AL+ + S +G N Sbjct: 110 DDAYDIVVIGGGPAGYVAAIKAAQLGGKIALV--EKSELGGTCLN 152 >gi|325694506|gb|EGD36415.1| acetoin dehydrogenase E3 component, dihydrolipoamide dehydrogenase [Streptococcus sanguinis SK150] Length = 568 Score = 37.0 bits (84), Expect = 9.4, Method: Compositional matrix adjust. Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 2/45 (4%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCN 47 + +YD++VIGGG AG AA AA+LG AL+ + S +G N Sbjct: 110 DDAYDIVVIGGGPAGYVAAIKAAQLGGKIALV--EKSELGGTCLN 152 >gi|329889707|ref|ZP_08268050.1| mercuric reductase [Brevundimonas diminuta ATCC 11568] gi|328845008|gb|EGF94572.1| mercuric reductase [Brevundimonas diminuta ATCC 11568] Length = 476 Score = 37.0 bits (84), Expect = 9.6, Method: Compositional matrix adjust. Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 4/61 (6%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YD++VIG G AG AA AA+ GA AL+ TIG N IG + L+R ++ Sbjct: 14 TYDLVVIGAGSAGFSAAITAAEEGARVALV--GAGTIGGTCVN--IGCVPSKALIRAVEP 69 Query: 65 L 65 L Sbjct: 70 L 70 >gi|308069007|ref|YP_003870612.1| NADH oxidase [Paenibacillus polymyxa E681] gi|305858286|gb|ADM70074.1| NADH oxidase [Paenibacillus polymyxa E681] Length = 673 Score = 37.0 bits (84), Expect = 9.6, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 10/54 (18%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGK 55 + + V+VIGGG AG EAA AA++G L K P +GGL + Sbjct: 380 VKNNVQVVVIGGGTAGMEAACTAAEVGCKVTLFEEK----------PELGGLAR 423 >gi|153813637|ref|ZP_01966305.1| hypothetical protein RUMOBE_04060 [Ruminococcus obeum ATCC 29174] gi|149830253|gb|EDM85346.1| hypothetical protein RUMOBE_04060 [Ruminococcus obeum ATCC 29174] Length = 425 Score = 37.0 bits (84), Expect = 9.6, Method: Compositional matrix adjust. Identities = 16/41 (39%), Positives = 25/41 (60%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSM 44 ++YD+++IGGG AG AA A K G + LI + +G + Sbjct: 2 KTYDIVIIGGGPAGLSAAVAARKNGTESILILERDKELGGI 42 >gi|324992905|gb|EGC24825.1| dihydrolipoamide dehydrogenase component E3 [Streptococcus sanguinis SK405] gi|327474231|gb|EGF19638.1| acetoin dehydrogenase E3 component, dihydrolipoamide dehydrogenase [Streptococcus sanguinis SK408] Length = 568 Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust. Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 2/45 (4%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCN 47 + +YD++VIGGG AG AA AA+LG AL+ + S +G N Sbjct: 110 DDAYDIVVIGGGPAGYVAAIKAAQLGGKIALV--EKSELGGTCLN 152 >gi|255264032|ref|ZP_05343374.1| dihydrolipoyl dehydrogenase [Thalassiobium sp. R2A62] gi|255106367|gb|EET49041.1| dihydrolipoyl dehydrogenase [Thalassiobium sp. R2A62] Length = 462 Score = 37.0 bits (84), Expect = 9.8, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 3/80 (3%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGS---MSCNPAIGGLGKGHLVRE 61 SYDVIVIG G G +A A+LG TA++ + + G+ + C P+ L H++ E Sbjct: 3 SYDVIVIGSGPGGYVSAIRCAQLGLKTAIVEGRETLGGTCLNVGCIPSKALLHASHMLHE 62 Query: 62 IDALDGLMGRVADAAGIQFR 81 + G MG + + ++ Sbjct: 63 AEHNFGAMGLKGKSPSVDWK 82 >gi|56750361|ref|YP_171062.1| dihydrolipoamide dehydrogenase [Synechococcus elongatus PCC 6301] gi|56685320|dbj|BAD78542.1| dihydrolipoamide dehydrogenase [Synechococcus elongatus PCC 6301] Length = 479 Score = 37.0 bits (84), Expect = 9.8, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 2/77 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKT--STIGSMSCNPAIGGLGKGHLVREID 63 YDVIVIG G+ G +AA A + G TA++ + T + C P+ L VREI Sbjct: 7 YDVIVIGAGYGGFDAAKHACEKGLKTAIVEARDLGGTCVNRGCVPSKALLAASGRVREIT 66 Query: 64 ALDGLMGRVADAAGIQF 80 D L G+ F Sbjct: 67 DTDHLQNFGIQVQGVSF 83 >gi|326444033|ref|ZP_08218767.1| putative oxidoreductase [Streptomyces clavuligerus ATCC 27064] Length = 508 Score = 37.0 bits (84), Expect = 9.9, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIG-SMSCNPAIG 51 SYD +V+GGGH G AAA A+ G S ++ +T G ++S P G Sbjct: 4 SYDAVVVGGGHNGLVAAAYLARAGRSVLVLERSPATGGAAVSARPFAG 51 >gi|254393133|ref|ZP_05008291.1| oxidoreductase [Streptomyces clavuligerus ATCC 27064] gi|294815687|ref|ZP_06774330.1| Oxidoreductase [Streptomyces clavuligerus ATCC 27064] gi|197706778|gb|EDY52590.1| oxidoreductase [Streptomyces clavuligerus ATCC 27064] gi|294328286|gb|EFG09929.1| Oxidoreductase [Streptomyces clavuligerus ATCC 27064] Length = 510 Score = 37.0 bits (84), Expect = 9.9, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIG-SMSCNPAIG 51 SYD +V+GGGH G AAA A+ G S ++ +T G ++S P G Sbjct: 6 SYDAVVVGGGHNGLVAAAYLARAGRSVLVLERSPATGGAAVSARPFAG 53 >gi|81300007|ref|YP_400215.1| dihydrolipoamide dehydrogenase [Synechococcus elongatus PCC 7942] gi|81168888|gb|ABB57228.1| dihydrolipoamide dehydrogenase [Synechococcus elongatus PCC 7942] Length = 479 Score = 37.0 bits (84), Expect = 9.9, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 2/77 (2%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKT--STIGSMSCNPAIGGLGKGHLVREID 63 YDVIVIG G+ G +AA A + G TA++ + T + C P+ L VREI Sbjct: 7 YDVIVIGAGYGGFDAAKHACEKGLKTAIVEARDLGGTCVNRGCVPSKALLAASGRVREIT 66 Query: 64 ALDGLMGRVADAAGIQF 80 D L G+ F Sbjct: 67 DTDHLQNFGIQVQGVSF 83 Searching..................................................done Results from round 2 >gi|254780808|ref|YP_003065221.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Candidatus Liberibacter asiaticus str. psy62] gi|254040485|gb|ACT57281.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Candidatus Liberibacter asiaticus str. psy62] Length = 626 Score = 887 bits (2293), Expect = 0.0, Method: Composition-based stats. Identities = 626/626 (100%), Positives = 626/626 (100%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR Sbjct: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI Sbjct: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN Sbjct: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC Sbjct: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL Sbjct: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI Sbjct: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV Sbjct: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS Sbjct: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES Sbjct: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG Sbjct: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Query: 601 MTPAALNLLLIYIKKNTVKLNEIVLV 626 MTPAALNLLLIYIKKNTVKLNEIVLV Sbjct: 601 MTPAALNLLLIYIKKNTVKLNEIVLV 626 >gi|315122031|ref|YP_004062520.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495433|gb|ADR52032.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 625 Score = 835 bits (2157), Expect = 0.0, Method: Composition-based stats. Identities = 526/625 (84%), Positives = 579/625 (92%), Gaps = 1/625 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M+ YDVIVIGGGHAGCEAA+ AA++GASTALITHK STIGSMSCNPAIGGLGKGHLVR Sbjct: 1 MLKSCYDVIVIGGGHAGCEAASAAARIGASTALITHKISTIGSMSCNPAIGGLGKGHLVR 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDALDGLMGRVADA+GIQFR+LN+KKGPAVRGPRTQADRELYRLAMQREILSQEN+DVI Sbjct: 61 EIDALDGLMGRVADASGIQFRILNIKKGPAVRGPRTQADRELYRLAMQREILSQENIDVI 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 QGEV FN + + ISSI+MQD +MIRCST+VLTTGTFLRG+I+IGK KIPAGRMGD PSN Sbjct: 121 QGEVTDFNVKDDKISSILMQDGTMIRCSTLVLTTGTFLRGIIYIGKSKIPAGRMGDPPSN 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 LFNSFM+FDFD GRLKTGTPARLDG+TIIW+KTEKQ+AD+ L+PFSFMTDKITN+QI C Sbjct: 181 CLFNSFMQFDFDMGRLKTGTPARLDGRTIIWEKTEKQYADKNLVPFSFMTDKITNKQIAC 240 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 GITRTN ETHRII ENIKHS+IYSGDIKS GPRYCPSIEDKI+RFGERNGHQ+FLEPEGL Sbjct: 241 GITRTNFETHRIITENIKHSSIYSGDIKSRGPRYCPSIEDKIIRFGERNGHQVFLEPEGL 300 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T VVYPNGISTALPEEIQHQFIRTIPGLEKV II PGYAIEYDY+NP+EL+PTLETKKI Sbjct: 301 CTHVVYPNGISTALPEEIQHQFIRTIPGLEKVEIISPGYAIEYDYVNPEELYPTLETKKI 360 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 +GLFLAGQINGTTGYEEAAAQGLVAGINSARKS LDC+CFSRTDSYIGVMIDDLTSKGV Sbjct: 361 TGLFLAGQINGTTGYEEAAAQGLVAGINSARKSKGLDCVCFSRTDSYIGVMIDDLTSKGV 420 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 +EPYRMFTSRAEYR+SLR +NADNRLTPIGM+LGCIG+ R++RF YIQEYN LR LLKS Sbjct: 421 VEPYRMFTSRAEYRLSLRTENADNRLTPIGMELGCIGKERRERFKNYIQEYNLLRDLLKS 480 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 +++TSKN++STSI KQDGK R AY+ LSYPDFSI+NLFSI PDA KFSS+V+ERL+IES Sbjct: 481 VIITSKNIASTSIPLKQDGKIRNAYDLLSYPDFSIKNLFSIYPDACKFSSIVLERLKIES 540 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 SY YT RQM+EAKEIKFEEKRLIP DFDYSSLPALSNELKEKLS +KPFNLLQASKIEG Sbjct: 541 SYDVYTKRQMVEAKEIKFEEKRLIPNDFDYSSLPALSNELKEKLSCVKPFNLLQASKIEG 600 Query: 601 MTPAALNLLLIYIKKN-TVKLNEIV 624 MTPAALNLLLIYIKKN ++K N++V Sbjct: 601 MTPAALNLLLIYIKKNTSIKENKMV 625 >gi|224585669|ref|YP_002639468.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|254811518|sp|C0Q2P1|MNMG_SALPC RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|224470197|gb|ACN48027.1| glucose-inhibited division protein A [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 629 Score = 831 bits (2147), Expect = 0.0, Method: Composition-based stats. Identities = 293/624 (46%), Positives = 396/624 (63%), Gaps = 6/624 (0%) Query: 1 MINRS-YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLV 59 M + +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV Sbjct: 1 MFYQDPFDVIIIGGGHAGTEAAMTAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLV 60 Query: 60 REIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDV 119 +E+DAL GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Sbjct: 61 KEVDALGGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMI 120 Query: 120 IQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 Q V E + + V Q R VVLT GTFL G IHIG GR GD PS Sbjct: 121 FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPS 180 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-I 238 L + RLKTGTP R+D +TI + +Q D + FSFM + + Q + Sbjct: 181 IPLSRRLRELPLRVSRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQV 240 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPE Sbjct: 241 PCYITHTNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQIFLEPE 300 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL ++ +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K Sbjct: 301 GLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESK 360 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I GLF AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + Sbjct: 361 FIHGLFFAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTL 420 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYRMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R L Sbjct: 421 GTKEPYRMFTSRAEYRLMLREDNADLRLTEMGRELGLVDDERWARFNEKLENIERERQRL 480 Query: 479 KSLVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIE 534 KS +T S+ ++ + + + L P+ + L S+ A E Sbjct: 481 KSTWVTPSAESADEVNAHLTTPLSREASGEDLLRRPEMTYAQLTSLAAFAPALEDEQAAE 540 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ Q Sbjct: 541 QVEIQVKYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQ 600 Query: 595 ASKIEGMTPAALNLLLIYIKKNTV 618 AS+I G+TPAA+++LL+++KK + Sbjct: 601 ASRISGVTPAAISILLVWLKKQGM 624 >gi|28899854|ref|NP_799459.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio parahaemolyticus RIMD 2210633] gi|260361980|ref|ZP_05774985.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio parahaemolyticus K5030] gi|260876533|ref|ZP_05888888.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio parahaemolyticus AN-5034] gi|260897410|ref|ZP_05905906.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio parahaemolyticus Peru-466] gi|260902395|ref|ZP_05910790.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio parahaemolyticus AQ4037] gi|31076670|sp|Q87K98|MNMG_VIBPA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|28808106|dbj|BAC61343.1| glucose inhibited division protein A [Vibrio parahaemolyticus RIMD 2210633] gi|308087884|gb|EFO37579.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio parahaemolyticus Peru-466] gi|308090424|gb|EFO40119.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio parahaemolyticus AN-5034] gi|308107142|gb|EFO44682.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio parahaemolyticus AQ4037] gi|308114121|gb|EFO51661.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio parahaemolyticus K5030] Length = 631 Score = 829 bits (2141), Expect = 0.0, Method: Composition-based stats. Identities = 286/623 (45%), Positives = 387/623 (62%), Gaps = 5/623 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA +A+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHENFDVIVVGGGHAGTEAALASARTGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAEAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRNALENAPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E++ + +V Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQSVDDLIVEQDRVVGVVTQMGLKFHAKAVVLTVGTFLGGKIHIGMESSSGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D +T+ + E Q D FSFM + + RQI Sbjct: 182 ALADRLRELPFRVDRLKTGTPPRIDARTVDFSVLEAQHGDNPTPVFSFMGKREHHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CFITHTNEQTHEVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTHELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 ISGLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 ISGLFFAGQINGTTGYEEAAAQGLMAGLNASLYSQGKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG I + R RF + I+ R LK Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLIDDVRWARFNEKIENMETERQRLK 481 Query: 480 SLVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIER 535 S + + ++ + + + L P+ S L + A E+ Sbjct: 482 STWVNPNSAGIDELNKLLKTPMAREASGEDLLRRPEISYSQLTQLDAFAPALEDQQAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y RQ E ++ E +P D DY + LSNE+ KLS KP ++ A Sbjct: 542 VEIQVKYDGYIKRQQEEIEKSLRHEHTKLPADLDYKDVKGLSNEVVAKLSEAKPESIGIA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV 618 S+I G+TPAA+++LL+++KK+ + Sbjct: 602 SRISGITPAAISILLVHLKKHGL 624 >gi|153838485|ref|ZP_01991152.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio parahaemolyticus AQ3810] gi|149748108|gb|EDM58967.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio parahaemolyticus AQ3810] Length = 631 Score = 828 bits (2140), Expect = 0.0, Method: Composition-based stats. Identities = 285/623 (45%), Positives = 386/623 (61%), Gaps = 5/623 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA +A+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHENFDVIVVGGGHAGTEAALASARTGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAEAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRNALENAPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E++ + +V Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQSVDDLIVEQDRVVGVVTQMGLKFHAKAVVLTVGTFLGGKIHIGMESSSGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D +T+ + E Q D FSFM + + RQI Sbjct: 182 ALADRLRELPFRVDRLKTGTPPRIDARTVDFSVLEAQHGDNPTPVFSFMGKREHHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CFITHTNEQTHEVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTHELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 IRGLFFAGQINGTTGYEEAAAQGLMAGLNASLYSQGKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG I + R RF + I+ R LK Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLIDDVRWARFNEKIENMETERQRLK 481 Query: 480 SLVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIER 535 S + + ++ + + + L P+ S L + A E+ Sbjct: 482 STWVNPNSAGIDELNKLLKTPMAREASGEDLLRRPEISYSQLTQLDAFAPALEDQQAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y RQ E ++ E +P D DY + LSNE+ KLS KP ++ A Sbjct: 542 VEIQVKYDGYIKRQQEEIEKSLRHEHTKLPVDLDYKDVKGLSNEVVAKLSEAKPESIGIA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV 618 S+I G+TPAA+++LL+++KK+ + Sbjct: 602 SRISGITPAAISILLVHLKKHGL 624 >gi|242241378|ref|YP_002989559.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Dickeya dadantii Ech703] gi|242133435|gb|ACS87737.1| glucose inhibited division protein A [Dickeya dadantii Ech703] Length = 629 Score = 828 bits (2139), Expect = 0.0, Method: Composition-based stats. Identities = 289/618 (46%), Positives = 393/618 (63%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA+ Sbjct: 7 FDVIVIGGGHAGTEAAMASARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAM 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM R D GIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMARAIDRGGIQFRILNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + +V Q R TVVLT GTFL G IHIG GR GD PS +L Sbjct: 127 DLIVENDRVVGVVTQMGLKFRARTVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSVALSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSF+ D + Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLTQQHGDNPMPVFSFLGDASQHPAQMPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEHTHEVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYDY +P++L TLE+K I+GLF Sbjct: 307 IYPNGISTSLPFDVQWQIVRSMQGMENARIVRPGYAIEYDYFDPRDLKQTLESKYIAGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQG++AG+N+AR + + R +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGMLAGLNAARLAFDQEGWTPRRDQAYLGVLVDDLCTLGTREPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R L+ + + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRQLGMVDDERWARFNEKLENIEKERQRLRGIFVH 486 Query: 485 SK--NLSSTSISFK-QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 + + ++ K + + + L P+ L + + + E+++I+ Sbjct: 487 PQSGQIEQVNVLLKTPLSREASGEDLLRRPEIDYAMLTRLPMFSPALVDAQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E + E L+P D DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIDKQSRNENTLLPADLDYRQVSGLSNEVIAKLNDHKPSSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LL+++KK + Sbjct: 607 ITPAAISILLVWLKKQGL 624 >gi|254509071|ref|ZP_05121174.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio parahaemolyticus 16] gi|219548004|gb|EED25026.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio parahaemolyticus 16] Length = 631 Score = 827 bits (2137), Expect = 0.0, Method: Composition-based stats. Identities = 288/630 (45%), Positives = 392/630 (62%), Gaps = 6/630 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA +A+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHENFDVIVVGGGHAGTEAALASARTGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D AGIQFR LN KGPAVR R QADR LY+ ++ + + +NL + Sbjct: 62 EVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVREALENADNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + +V Q R VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQSVDDLIVENDTAVGVVTQMGLKFRAKAVVLTVGTFLGGKIHIGMESSSGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D +++ + + E Q D FSFM + + RQI Sbjct: 182 ALADRLRELPFRVDRLKTGTPPRIDARSVDFSELEVQHGDNPTPVFSFMGQRTQHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CFITHTNESTHEVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTHELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 ISGLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 ISGLFFAGQINGTTGYEEAAAQGLMAGLNASLHSQGKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG I + R RF + I R LK Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLIDDARWARFNEKIDNMEKERQRLK 481 Query: 480 SLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIER 535 + K+ + +I + + + L P+ + L ++ A E+ Sbjct: 482 ETWMNPKSEGIDALNAILKSPMSREASGEDLLRRPEMTYSQLTALDRFAPALEDQQAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y RQ E ++ E +P D DYS + LSNE+ KL+ KP ++ A Sbjct: 542 VEIQVKYEGYIQRQQDEIEKSLRHENTKLPVDMDYSKVSGLSNEVVAKLTEAKPESIGIA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV-KLNEIV 624 S+I G+TPAA+++LL+++KK + K E+ Sbjct: 602 SRISGITPAAISILLVHLKKQGILKKGEVA 631 >gi|328471205|gb|EGF42107.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio parahaemolyticus 10329] Length = 631 Score = 827 bits (2136), Expect = 0.0, Method: Composition-based stats. Identities = 286/623 (45%), Positives = 387/623 (62%), Gaps = 5/623 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA +A+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHENFDVIVVGGGHAGTEAALASARTGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAEAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRNALENAPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E++ + +V Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQSVDDLIVEQDRVVGVVTQMGLKFHAKAVVLTVGTFLGGKIHIGMESSSGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D +T+ + E Q D FSFM + + RQI Sbjct: 182 ALADRLRELPFRVDRLKTGTPPRIDARTVDFSVLEAQHGDNPTPIFSFMGKREHHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CFITHTNEQTHEVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTHELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 ISGLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 ISGLFFAGQINGTTGYEEAAAQGLMAGLNASLYSQGKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG I + R RF + I+ R LK Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLIDDVRWARFNEKIENMETERQRLK 481 Query: 480 SLVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIER 535 S + + ++ + + + L P+ S L + A E+ Sbjct: 482 STWVNPNSAGIDELNKLLKTPMAREASGEDLLRRPEISYSQLTQLDAFAPALEDQQAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y RQ E ++ E +P D DY + LSNE+ KLS KP ++ A Sbjct: 542 VEIQVKYDGYIKRQQEEIEKSLRHEHTKLPADLDYKDVKGLSNEVVAKLSEAKPESIGIA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV 618 S+I G+TPAA+++LL+++KK+ + Sbjct: 602 SRISGITPAAISILLVHLKKHGL 624 >gi|156972768|ref|YP_001443675.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio harveyi ATCC BAA-1116] gi|166224337|sp|A7N0X6|MNMG_VIBHB RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|156524362|gb|ABU69448.1| hypothetical protein VIBHAR_00433 [Vibrio harveyi ATCC BAA-1116] Length = 631 Score = 827 bits (2136), Expect = 0.0, Method: Composition-based stats. Identities = 283/623 (45%), Positives = 388/623 (62%), Gaps = 5/623 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA +A+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHENFDVIVVGGGHAGTEAALASARTGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAEAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRNALENAPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V +++ + +V Q + VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQSVDDLIVDQDRVVGVVTQMGLKFQAKAVVLTVGTFLGGKIHIGMESSSGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT-NRQIE 239 +L + + F RLKTGTP R+D +++ + E Q D FSFM + RQI Sbjct: 182 ALADRLRELPFRVDRLKTGTPPRIDARSVDFSVLEAQHGDNPTPVFSFMGKREHQPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CFITHTNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTHELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 ISGLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 ISGLFFAGQINGTTGYEEAAAQGLMAGLNASLHSQGKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG I + R RF + I+ R LK Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLIDDARWARFNEKIENMETERQRLK 481 Query: 480 SLVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIER 535 S + + ++ + + + L P+ S +L + A E+ Sbjct: 482 STWMNPNSAGIDELNKLLKTPMAREASGEDLLRRPEISYSDLTQLDAFAPALEDQQASEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y RQ E ++ E +P D DY + LSNE+ KL+ KP ++ A Sbjct: 542 VEIQVKYDGYIKRQQEEIEKSLRHEHTKLPADLDYKDVKGLSNEVVAKLTEAKPESIGIA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV 618 S+I G+TPAA+++LL+++KK+ + Sbjct: 602 SRISGITPAAISILLVHLKKHGL 624 >gi|170766699|ref|ZP_02901152.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia albertii TW07627] gi|170124137|gb|EDS93068.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia albertii TW07627] Length = 629 Score = 827 bits (2136), Expect = 0.0, Method: Composition-based stats. Identities = 293/618 (47%), Positives = 398/618 (64%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + Q + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNVAQHPQQVPCYITY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMKGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIEGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEMGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 ++ ++ + + + L P+ + + L S+ P A E+++I+ Sbjct: 487 PSAEAAAEVNAHLTTPLSREASGEDLLRRPEMTYEKLTSLVPFAPALRDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ + E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQQRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LL+++KK + Sbjct: 607 ITPAAISILLVWLKKQGM 624 >gi|218551275|ref|YP_002385067.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Escherichia fergusonii ATCC 35469] gi|218358817|emb|CAQ91474.1| glucose-inhibited cell-division protein [Escherichia fergusonii ATCC 35469] gi|325499547|gb|EGC97406.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia fergusonii ECD227] Length = 629 Score = 826 bits (2135), Expect = 0.0, Method: Composition-based stats. Identities = 292/618 (47%), Positives = 396/618 (64%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + Q + C +T Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNAAQHPQQVPCYLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMKGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEMGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 ++ + + + L P+ + + L S+ P A E+++I+ Sbjct: 487 PSTEGVAEVNAHLTSPLSREASGEDLLRRPEMTYETLTSLAPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ + E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQQRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LL+++KK + Sbjct: 607 VTPAAISILLVWLKKQGM 624 >gi|324111640|gb|EGC05621.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia fergusonii B253] Length = 629 Score = 826 bits (2134), Expect = 0.0, Method: Composition-based stats. Identities = 292/618 (47%), Positives = 396/618 (64%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + Q + C +T Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNAAQHPQQVPCYLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMKGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEMGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISF---KQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 ++ + + + L P+ + + L S+ P A E+++I+ Sbjct: 487 PSTEGVAEVNAYLTSPLSREASGEDLLRRPEMTYETLTSLAPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ + E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQQRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LL+++KK + Sbjct: 607 VTPAAISILLVWLKKQGM 624 >gi|27364443|ref|NP_759971.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio vulnificus CMCP6] gi|29611746|sp|Q8DDH9|MNMG_VIBVU RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|27360562|gb|AAO09498.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio vulnificus CMCP6] Length = 632 Score = 826 bits (2134), Expect = 0.0, Method: Composition-based stats. Identities = 284/620 (45%), Positives = 389/620 (62%), Gaps = 5/620 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA +A+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHETFDVIVVGGGHAGTEAALASARTGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRDFLENAPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E++ + ++ Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQAVDDLIVEQDQVRGVITQMGLKFHAKAVVLTVGTFLGGKIHIGLQSSSGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D +++ + E Q D FSFM D+ + RQI Sbjct: 182 ALADRLRELPFRVDRLKTGTPPRIDARSVDFSVLEAQHGDNPTPVFSFMGDRTHHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CFITHTNEQTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTHELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG+N++ S + + R +Y+GV+IDDL++ G Sbjct: 362 IQGLFFAGQINGTTGYEEAAAQGLMAGLNASLFSQEKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAE+R+ LR DNAD RLT +LG + + R RF + I R LK Sbjct: 422 TKEPYRMFTSRAEHRLLLREDNADLRLTEKARELGLVDDARWARFNQKIDNMEQERQRLK 481 Query: 480 SLVLTSKN--LSSTSISFK-QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIER 535 S + + + + K + + + L P+ + + L S+ A E+ Sbjct: 482 STWMNPASTGIEELNQLLKSPMNREASGEDLLRRPEMTYEQLTSLAAFAPALDDLEAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y RQ E ++ E +P D DYS + LSNE+ KL+ KP L A Sbjct: 542 VEIQVKYEGYIKRQQDEIEKSLRHEHTKLPADLDYSDVKGLSNEVVLKLNTAKPETLGIA 601 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G+TPAA+++LL+++KK Sbjct: 602 SRISGITPAAISILLVHLKK 621 >gi|320154847|ref|YP_004187226.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio vulnificus MO6-24/O] gi|319930159|gb|ADV85023.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio vulnificus MO6-24/O] Length = 632 Score = 825 bits (2132), Expect = 0.0, Method: Composition-based stats. Identities = 284/620 (45%), Positives = 389/620 (62%), Gaps = 5/620 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA +A+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHETFDVIVVGGGHAGTEAALASARTGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRDFLENAPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E++ + ++ Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQAVDDLIVEQDQVRGVITQMGLKFHAKAVVLTVGTFLGGKIHIGLQSSSGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D +++ + E Q D FSFM D+ + RQI Sbjct: 182 ALADRLRELPFRVDRLKTGTPPRIDARSVDFSVLEAQHGDNPTPVFSFMGDRTHHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CFITHTNEQTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTHELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG+N++ S + + R +Y+GV+IDDL++ G Sbjct: 362 IQGLFFAGQINGTTGYEEAAAQGLMAGLNASLFSQEKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAE+R+ LR DNAD RLT +LG + + R RF + I R LK Sbjct: 422 TKEPYRMFTSRAEHRLLLREDNADLRLTEKARELGLVDDARWARFNQKIDNMEQERQRLK 481 Query: 480 SLVLTSKN--LSSTSISFK-QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIER 535 S + + + + K + + + L P+ + + L S+ A E+ Sbjct: 482 STWMNPASTGIEELNQLLKSPMNREASGEDLLRRPEMTYEQLTSLAAFAPALDDLEAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y RQ E ++ E +P D DYS + LSNE+ KL+ KP L A Sbjct: 542 VEIQVKYEGYIKRQQDEIEKSLRHEHTKLPVDLDYSEVKGLSNEVVLKLNTAKPETLGIA 601 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G+TPAA+++LL+++KK Sbjct: 602 SRISGITPAAISILLVHLKK 621 >gi|149190485|ref|ZP_01868756.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio shilonii AK1] gi|148835739|gb|EDL52705.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio shilonii AK1] Length = 631 Score = 825 bits (2132), Expect = 0.0, Method: Composition-based stats. Identities = 289/630 (45%), Positives = 390/630 (61%), Gaps = 6/630 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA +A+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHETFDVIVVGGGHAGTEAALASARTGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAEAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRNALENTPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E++ + +V + +VVLT GTFL G IHIG GRMGD PS Sbjct: 122 QQSVDDLIVEQDQVRGVVTEMGLKFHSRSVVLTVGTFLGGKIHIGMESSSGGRMGDQPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIE 239 +L + F RLKTGTP R+D +++ + E Q D FSFM ++ + QI Sbjct: 182 ALAARLRELPFRVDRLKTGTPPRIDARSVDFSALEVQHGDNPTPVFSFMGNRNQHPTQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CFITHTNESTHEVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTHELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 ISGLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 ISGLFFAGQINGTTGYEEAAAQGLMAGLNASLYSQGKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT LG I E+R RF + + R LK Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADIRLTEHAHNLGLIDEKRWSRFNEKLNNMATERQRLK 481 Query: 480 SLVLTSKN--LSSTSISFK-QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIER 535 + K+ + + ++ K + + + L P+ + L S+ A E+ Sbjct: 482 ETWVNPKSEGIEALNVLLKSPISREASGEDLLRRPELNYSQLTSLDAFAPAMEDQQASEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y RQ E + E IP D DYS + LSNE+ KL+ KP + A Sbjct: 542 VEIQVKYEGYIQRQQDEIAKSLRHENTKIPADLDYSDVKGLSNEVVAKLTEAKPETVGIA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV-KLNEIV 624 S+I G+TPAA+++LL+Y+KK + K E Sbjct: 602 SRISGITPAAISILLVYLKKQGMLKKGEAA 631 >gi|269962683|ref|ZP_06177028.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269832606|gb|EEZ86720.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 631 Score = 825 bits (2132), Expect = 0.0, Method: Composition-based stats. Identities = 283/623 (45%), Positives = 386/623 (61%), Gaps = 5/623 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA +A+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHENFDVIVVGGGHAGTEAALASARTGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAEAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRNALENAPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V +++ + +V Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQSVDDLIVDQDRVVGVVTQMGLKFHAKAVVLTVGTFLGGKIHIGMESSSGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT-NRQIE 239 +L + + F RLKTGTP R+D +++ + E Q D FSFM + RQI Sbjct: 182 ALADRLRELPFRVDRLKTGTPPRIDARSVDFSVLEAQHGDNPTPVFSFMGKREHQPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CFITHTNEQTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTHELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 ISGLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 ISGLFFAGQINGTTGYEEAAAQGLMAGLNASLHSQGKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG I + R RF + I+ R LK Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLIDDVRWARFNEKIENMETERQRLK 481 Query: 480 SLVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIER 535 S + + ++ + + + L P+ S L + A E+ Sbjct: 482 STWMNPNSAGIDELNKLLKTPMAREASGEDLLRRPEISYSQLTQLDAFAPALEDQQASEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y RQ E ++ E +P D DY + LSNE+ KL+ KP ++ A Sbjct: 542 VEIQVKYDGYIKRQQEEIEKSLRHEHTKLPADLDYKDVKGLSNEVVAKLTEAKPESIGIA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV 618 S+I G+TPAA+++LL+++KK+ + Sbjct: 602 SRISGITPAAISILLVHLKKHGL 624 >gi|37681446|ref|NP_936055.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio vulnificus YJ016] gi|56749077|sp|Q7MGG9|MNMG_VIBVY RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|37200198|dbj|BAC96026.1| glucose inhibited division protein A [Vibrio vulnificus YJ016] Length = 632 Score = 825 bits (2132), Expect = 0.0, Method: Composition-based stats. Identities = 284/620 (45%), Positives = 388/620 (62%), Gaps = 5/620 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA +A+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHETFDVIVVGGGHAGTEAALASARTGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRDFLENAPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E++ + ++ Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQAVDDLIVEQDQVRGVITQMGLKFHAKAVVLTVGTFLGGKIHIGLQSSSGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D +++ + E Q D FSFM D+ + RQI Sbjct: 182 ALADRLRELPFRVDRLKTGTPPRIDARSVDFSVLEAQHGDNPTPVFSFMGDRTHHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CFITHTNEQTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTHELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG+N++ S + + R +Y+GV+IDDL++ G Sbjct: 362 IQGLFFAGQINGTTGYEEAAAQGLMAGLNASLFSQEKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAE+R+ LR DNAD RLT +LG + + R RF + I R LK Sbjct: 422 TKEPYRMFTSRAEHRLLLREDNADLRLTEKARELGLVDDARWARFNQKIDNMEQERQRLK 481 Query: 480 SLVLTSKN--LSSTSISFKQD-GKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIER 535 S + + + + K + + + L P+ + L S+ A E+ Sbjct: 482 STWMNPASTGIDELNQLLKTPMNREASGEDLLRRPEMTYDQLTSLTAFAPAIDDLEAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y RQ E ++ E +P D DYS + LSNE+ KL+ KP L A Sbjct: 542 VEIQVKYEGYIKRQQDEIEKSLRHEHTKLPADLDYSDVKGLSNEVVLKLNTAKPETLGIA 601 Query: 596 SKIEGMTPAALNLLLIYIKK 615 S+I G+TPAA+++LL+++KK Sbjct: 602 SRISGITPAAISILLVHLKK 621 >gi|215489079|ref|YP_002331510.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O127:H6 str. E2348/69] gi|312967849|ref|ZP_07782061.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli 2362-75] gi|254811510|sp|B7UMK6|MNMG_ECO27 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|215267151|emb|CAS11599.1| glucose-inhibited cell-division protein [Escherichia coli O127:H6 str. E2348/69] gi|312287410|gb|EFR15318.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli 2362-75] Length = 629 Score = 825 bits (2131), Expect = 0.0, Method: Composition-based stats. Identities = 294/618 (47%), Positives = 397/618 (64%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + Q + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 ++ ++ + + + L P+ + + L S+ P A E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTSLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LL+++KK + Sbjct: 607 VTPAAISILLVWLKKQGM 624 >gi|218711034|ref|YP_002418655.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio splendidus LGP32] gi|254811523|sp|B7VN07|MNMG_VIBSL RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|218324053|emb|CAV20415.1| gid A : glucose inhibited division protein A [Vibrio splendidus LGP32] Length = 631 Score = 825 bits (2131), Expect = 0.0, Method: Composition-based stats. Identities = 282/623 (45%), Positives = 387/623 (62%), Gaps = 5/623 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + +DVIV+GGGHAG EAA +A+ G ST L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHEKFDVIVVGGGHAGTEAALASARTGQSTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAFVRNVLENTPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E++ + +V Q R + VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQSVDDLIVEQDQVVGVVTQMGLKFRANAVVLTVGTFLGGKIHIGMESSSGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT-NRQIE 239 +L + F RLKTGTP R+D +++ + + E Q D FSFM ++ RQI Sbjct: 182 ALADRLRDLPFRVDRLKTGTPPRIDARSVDFSELEVQHGDNPTPVFSFMGNRAQQPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CYITHTNENTHDVIRANLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q + + ++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTHELYPNGISTSLPFDVQVKIVHSMKGFENAHIVRPGYAIEYDFFDPRDLKLTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG+N++ + + R +Y+GV+IDDL++ G Sbjct: 362 IKGLFFAGQINGTTGYEEAAAQGLMAGLNASLFTQGKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG + + R RF + ++ R LK Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADIRLTEKSRELGLVDDARWTRFNEKMENMEKERQRLK 481 Query: 480 SLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIER 535 + K+ I + + + L P+ + L S+ E+ Sbjct: 482 ETWINPKSEDIDQLNQILKTPMSREASGEDLLRRPEMTYSQLTSLDRFGPALEDQQASEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y RQ E ++ E +P D DYS + LSNE+ KL+ KP ++ A Sbjct: 542 VEIQVKYDGYIQRQQDEIEKSLRHENTKLPADIDYSKVKGLSNEVVLKLTTAKPDSIGIA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV 618 S+I G+TPAA+++LL+Y+KK+ + Sbjct: 602 SRISGITPAAISILLVYLKKHGL 624 >gi|293413191|ref|ZP_06655857.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli B354] gi|291468324|gb|EFF10819.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli B354] Length = 629 Score = 825 bits (2131), Expect = 0.0, Method: Composition-based stats. Identities = 293/618 (47%), Positives = 397/618 (64%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + Q + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDDQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LL+++KK + Sbjct: 607 VTPAAISILLVWLKKQGM 624 >gi|15804341|ref|NP_290380.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O157:H7 EDL933] gi|15833937|ref|NP_312710.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O157:H7 str. Sakai] gi|168753643|ref|ZP_02778650.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O157:H7 str. EC4401] gi|168786584|ref|ZP_02811591.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O157:H7 str. EC869] gi|195936368|ref|ZP_03081750.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O157:H7 str. EC4024] gi|208807342|ref|ZP_03249679.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O157:H7 str. EC4206] gi|208814423|ref|ZP_03255752.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O157:H7 str. EC4045] gi|209400287|ref|YP_002273269.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O157:H7 str. EC4115] gi|217326532|ref|ZP_03442616.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O157:H7 str. TW14588] gi|254795747|ref|YP_003080584.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O157:H7 str. TW14359] gi|261225898|ref|ZP_05940179.1| glucose-inhibited cell-division protein [Escherichia coli O157:H7 str. FRIK2000] gi|261258943|ref|ZP_05951476.1| glucose-inhibited cell-division protein [Escherichia coli O157:H7 str. FRIK966] gi|291285165|ref|YP_003501983.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Escherichia coli O55:H7 str. CB9615] gi|21263660|sp|Q8XAY0|MNMG_ECO57 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|238058367|sp|B5YXE5|MNMG_ECO5E RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|12518598|gb|AAG58944.1|AE005605_12 glucose-inhibited division; chromosome replication [Escherichia coli O157:H7 str. EDL933] gi|13364158|dbj|BAB38106.1| glucose-inhibited division protein GidA [Escherichia coli O157:H7 str. Sakai] gi|189358928|gb|EDU77347.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O157:H7 str. EC4401] gi|189373258|gb|EDU91674.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O157:H7 str. EC869] gi|208727143|gb|EDZ76744.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O157:H7 str. EC4206] gi|208735700|gb|EDZ84387.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O157:H7 str. EC4045] gi|209161687|gb|ACI39120.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O157:H7 str. EC4115] gi|209753798|gb|ACI75206.1| MioC protein [Escherichia coli] gi|209753800|gb|ACI75207.1| MioC protein [Escherichia coli] gi|209753802|gb|ACI75208.1| MioC protein [Escherichia coli] gi|209753804|gb|ACI75209.1| MioC protein [Escherichia coli] gi|209753806|gb|ACI75210.1| MioC protein [Escherichia coli] gi|217322753|gb|EEC31177.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O157:H7 str. TW14588] gi|254595147|gb|ACT74508.1| glucose-inhibited cell-division protein [Escherichia coli O157:H7 str. TW14359] gi|290765038|gb|ADD58999.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Escherichia coli O55:H7 str. CB9615] gi|320191155|gb|EFW65805.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O157:H7 str. EC1212] gi|320639469|gb|EFX09084.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O157:H7 str. G5101] gi|320644909|gb|EFX13945.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O157:H- str. 493-89] gi|320650175|gb|EFX18671.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O157:H- str. H 2687] gi|320655524|gb|EFX23459.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661147|gb|EFX28583.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O55:H7 str. USDA 5905] gi|320666276|gb|EFX33282.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O157:H7 str. LSU-61] gi|326341577|gb|EGD65366.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O157:H7 str. 1125] Length = 629 Score = 824 bits (2130), Expect = 0.0, Method: Composition-based stats. Identities = 293/618 (47%), Positives = 398/618 (64%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + Q + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S+ + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSDDKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LL+++KK + Sbjct: 607 VTPAAISILLVWLKKQGM 624 >gi|193071616|ref|ZP_03052522.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli E110019] gi|192955080|gb|EDV85577.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli E110019] Length = 629 Score = 824 bits (2130), Expect = 0.0, Method: Composition-based stats. Identities = 293/618 (47%), Positives = 397/618 (64%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQSVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + Q + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LL+++KK + Sbjct: 607 VTPAAISILLVWLKKQGM 624 >gi|323965809|gb|EGB61260.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli M863] gi|327250893|gb|EGE62595.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli STEC_7v] Length = 629 Score = 824 bits (2130), Expect = 0.0, Method: Composition-based stats. Identities = 293/618 (47%), Positives = 397/618 (64%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + Q + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 ++ ++ + + + L P+ + + L + P A E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTMLAPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ + E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQQRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LL+++KK + Sbjct: 607 VTPAAISILLVWLKKQGM 624 >gi|322835093|ref|YP_004215120.1| glucose inhibited division protein A [Rahnella sp. Y9602] gi|321170294|gb|ADW75993.1| glucose inhibited division protein A [Rahnella sp. Y9602] Length = 629 Score = 824 bits (2130), Expect = 0.0, Method: Composition-based stats. Identities = 291/619 (47%), Positives = 395/619 (63%), Gaps = 5/619 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVI+IGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DA Sbjct: 6 QFDVIIIGGGHAGTEAAMASARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLM D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 66 LGGLMATAIDHAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQPV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + V + R VVLT GTFL G IHIG GR GD P+ SL Sbjct: 126 EDLIVENDRVVGAVTKMGLKFRAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPAISLSQ 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 + RLKTGTP R+D +TI + +Q D FSFM + + RQI C +T Sbjct: 186 RLRELPLRVNRLKTGTPPRIDARTIDFSVLAQQHGDNPAPVFSFMGNVSQHPRQIPCYMT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 246 YTNEKTHDVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNSHQIFLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GL Sbjct: 306 EVYPNGISTSLPFDVQMQIVRSMQGMENAVIVRPGYAIEYDFFDPRDLKPTLESKFIGGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+AR +++ + R +Y+GV++DDL + G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGMNAARSASEEEGWAPRRDQAYLGVLVDDLCTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT G +LG + + R RF + ++ R L+ + + Sbjct: 426 YRMFTSRAEYRLMLREDNADLRLTEKGRELGLVDDARWARFNEKLEMIEQERQRLRGIWV 485 Query: 484 TSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIE 539 + I+ K +A E L P+ + + + + P A E+++I+ Sbjct: 486 NPHHAQVEEINAHLSAPLSKEASAEELLRRPEMTYELITRLSPFAPSVPDVQAAEQVEIQ 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ E ++ + E ++P D DY + LSNE+ KL+ KP ++ QAS+I Sbjct: 546 IKYEGYIARQQEEIEKQQRNENTVLPVDLDYRQVNGLSNEVIAKLNDHKPTSIGQASRIS 605 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+TPAA+++LLI++KK + Sbjct: 606 GITPAAISILLIWLKKQGL 624 >gi|86147165|ref|ZP_01065481.1| glucose-inhibited division protein A [Vibrio sp. MED222] gi|85835049|gb|EAQ53191.1| glucose-inhibited division protein A [Vibrio sp. MED222] Length = 631 Score = 824 bits (2130), Expect = 0.0, Method: Composition-based stats. Identities = 282/623 (45%), Positives = 386/623 (61%), Gaps = 5/623 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + +DVIV+GGGHAG EAA +A+ G ST L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHEKFDVIVVGGGHAGTEAALASARTGQSTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAFVRNVLENTPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E++ + +V Q R + VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQSVDDLIVEQDQVVGVVTQMGLKFRANAVVLTVGTFLGGKIHIGMESSSGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT-NRQIE 239 +L + F RLKTGTP R+D +++ + E Q D FSFM ++ RQI Sbjct: 182 ALADRLRDLPFRVDRLKTGTPPRIDARSVDFSDLEVQHGDNPTPVFSFMGNRAQQPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CYITHTNENTHDVIRANLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q + + ++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTHELYPNGISTSLPFDVQVKIVHSMKGFENAHIVRPGYAIEYDFFDPRDLKLTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG+N++ + + R +Y+GV+IDDL++ G Sbjct: 362 IKGLFFAGQINGTTGYEEAAAQGLMAGLNASLFTQGKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG + + R RF + ++ R LK Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADIRLTEKSRELGLVDDARWTRFNEKMENMEKERQRLK 481 Query: 480 SLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIER 535 + K+ I + + + L P+ + L S+ E+ Sbjct: 482 ETWINPKSEDIDQLNQILKTPMSREASGEDLLRRPEMTYSQLTSLDRFGPALEDQQASEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y RQ E ++ E +P D DYS + LSNE+ KL+ KP ++ A Sbjct: 542 VEIQVKYDGYIQRQQDEIEKSLRHENTKLPADIDYSKVKGLSNEVVLKLTTAKPDSIGIA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV 618 S+I G+TPAA+++LL+Y+KK+ + Sbjct: 602 SRISGITPAAISILLVYLKKHGL 624 >gi|300950658|ref|ZP_07164552.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 116-1] gi|300958750|ref|ZP_07170866.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 175-1] gi|300314604|gb|EFJ64388.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 175-1] gi|300450028|gb|EFK13648.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 116-1] gi|323939196|gb|EGB35409.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli E482] Length = 629 Score = 824 bits (2130), Expect = 0.0, Method: Composition-based stats. Identities = 293/618 (47%), Positives = 397/618 (64%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + Q + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPSLTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LL+++KK + Sbjct: 607 VTPAAISILLVWLKKQGM 624 >gi|224510581|pdb|3CES|A Chain A, Crystal Structure Of E.Coli Mnmg (Gida), A Highly-Conserved Trna Modifying Enzyme gi|224510582|pdb|3CES|B Chain B, Crystal Structure Of E.Coli Mnmg (Gida), A Highly-Conserved Trna Modifying Enzyme gi|224510583|pdb|3CES|C Chain C, Crystal Structure Of E.Coli Mnmg (Gida), A Highly-Conserved Trna Modifying Enzyme gi|224510584|pdb|3CES|D Chain D, Crystal Structure Of E.Coli Mnmg (Gida), A Highly-Conserved Trna Modifying Enzyme Length = 651 Score = 824 bits (2130), Expect = 0.0, Method: Composition-based stats. Identities = 293/618 (47%), Positives = 397/618 (64%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 29 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 88 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 89 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 148 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 149 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 208 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + Q + C IT Sbjct: 209 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 268 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 269 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 328 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 329 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 388 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 389 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 448 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 449 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 508 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A E+++I+ Sbjct: 509 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 568 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 569 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 628 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LL+++KK + Sbjct: 629 VTPAAISILLVWLKKQGM 646 >gi|192988502|pdb|3CP2|A Chain A, Crystal Structure Of Gida From E. Coli Length = 649 Score = 824 bits (2130), Expect = 0.0, Method: Composition-based stats. Identities = 293/618 (47%), Positives = 397/618 (64%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 27 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 86 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 87 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 146 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 147 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 206 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + Q + C IT Sbjct: 207 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 266 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 267 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 326 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 327 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 386 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 387 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 446 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 447 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 506 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A E+++I+ Sbjct: 507 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 566 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 567 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 626 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LL+++KK + Sbjct: 627 VTPAAISILLVWLKKQGM 644 >gi|323975191|gb|EGB70295.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli TW10509] Length = 629 Score = 824 bits (2129), Expect = 0.0, Method: Composition-based stats. Identities = 293/618 (47%), Positives = 397/618 (64%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + Q + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 ++ ++ + + + L P+ + + L + P A E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTMLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ + E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQQRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LL+++KK + Sbjct: 607 VTPAAISILLVWLKKQGM 624 >gi|251791738|ref|YP_003006459.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Dickeya zeae Ech1591] gi|247540359|gb|ACT08980.1| glucose inhibited division protein A [Dickeya zeae Ech1591] Length = 629 Score = 824 bits (2129), Expect = 0.0, Method: Composition-based stats. Identities = 288/618 (46%), Positives = 389/618 (62%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA+ Sbjct: 7 FDVIVIGGGHAGTEAAMASARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAM 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM R D GIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMARAIDRGGIQFRILNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLTLFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS +L + Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIALSHR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + GRLKTGTP R+D +TI + Q D+ + FSF+ + Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLTPQHGDDPMPVFSFLGKASEHPTQMPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNERTHDVIRSNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G++ I+RPGYAIEYDY +P++L PTLE+K I LF Sbjct: 307 IYPNGISTSLPFDVQWQIVRSMDGMQNARIVRPGYAIEYDYFDPRDLKPTLESKFIHNLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQG++AG+N+AR + + R +YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGMLAGLNAARLAFDQEGWTPRRDQAYIGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R L+ +++ Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTAIGRELGMVDDERWARFNEKLENIEKERQRLRDVLVH 486 Query: 485 SKNLSSTSISF---KQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 + I+ + + L P+ L + A E+++I+ Sbjct: 487 PHSEGVEQINSLLKSPLSREANGEDLLRRPEMDYVQLTGLPMFAPALPDVQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ + E L+P D DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQQRNENTLLPADLDYRQVSGLSNEVIAKLNDHKPSSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LL+++KK + Sbjct: 607 ITPAAISILLVWLKKQGM 624 >gi|16131609|ref|NP_418197.1| 5-methylaminomethyl-2-thiouridine modification at tRNA U34 [Escherichia coli str. K-12 substr. MG1655] gi|26250487|ref|NP_756527.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli CFT073] gi|82546099|ref|YP_410046.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella boydii Sb227] gi|89110266|ref|AP_004046.1| glucose-inhibited cell-division protein [Escherichia coli str. K-12 substr. W3110] gi|110644082|ref|YP_671812.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli 536] gi|157155354|ref|YP_001465231.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli E24377A] gi|157163223|ref|YP_001460541.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli HS] gi|170022222|ref|YP_001727176.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli ATCC 8739] gi|170083242|ref|YP_001732562.1| glucose-inhibited cell-division protein [Escherichia coli str. K-12 substr. DH10B] gi|188493426|ref|ZP_03000696.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Escherichia coli 53638] gi|191170517|ref|ZP_03032070.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli F11] gi|193063784|ref|ZP_03044871.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli E22] gi|194428129|ref|ZP_03060673.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli B171] gi|209921222|ref|YP_002295306.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli SE11] gi|218556312|ref|YP_002389226.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Escherichia coli IAI1] gi|218692029|ref|YP_002400241.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli ED1a] gi|218697467|ref|YP_002405134.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli 55989] gi|218702591|ref|YP_002410220.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli IAI39] gi|218707387|ref|YP_002414906.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli UMN026] gi|227883963|ref|ZP_04001768.1| glucose inhibited cell division protein A [Escherichia coli 83972] gi|238902832|ref|YP_002928628.1| glucose-inhibited cell-division protein [Escherichia coli BW2952] gi|254038960|ref|ZP_04873012.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Escherichia sp. 1_1_43] gi|256025528|ref|ZP_05439393.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia sp. 4_1_40B] gi|260846474|ref|YP_003224252.1| glucose-inhibited cell-division protein GidA [Escherichia coli O103:H2 str. 12009] gi|293407378|ref|ZP_06651300.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Escherichia coli FVEC1412] gi|293417214|ref|ZP_06659841.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli B185] gi|293464067|ref|ZP_06664481.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli B088] gi|298383120|ref|ZP_06992715.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Escherichia coli FVEC1302] gi|300815004|ref|ZP_07095229.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 107-1] gi|300824549|ref|ZP_07104659.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 119-7] gi|300896070|ref|ZP_07114629.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 198-1] gi|300916390|ref|ZP_07133130.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 115-1] gi|300925571|ref|ZP_07141444.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 182-1] gi|300983872|ref|ZP_07176780.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 200-1] gi|300984345|ref|ZP_07176951.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 45-1] gi|301020855|ref|ZP_07184916.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 69-1] gi|301047564|ref|ZP_07194636.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 185-1] gi|301324958|ref|ZP_07218513.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 78-1] gi|301644417|ref|ZP_07244416.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 146-1] gi|306815907|ref|ZP_07450045.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli NC101] gi|307140441|ref|ZP_07499797.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli H736] gi|307313187|ref|ZP_07592812.1| glucose inhibited division protein A [Escherichia coli W] gi|309795702|ref|ZP_07690117.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 145-7] gi|312971967|ref|ZP_07786141.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli 1827-70] gi|331644468|ref|ZP_08345597.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli H736] gi|331649567|ref|ZP_08350653.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli M605] gi|331655403|ref|ZP_08356402.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli M718] gi|331665395|ref|ZP_08366296.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli TA143] gi|331670592|ref|ZP_08371431.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli TA271] gi|331675225|ref|ZP_08375978.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli TA280] gi|331679845|ref|ZP_08380515.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli H591] gi|331685468|ref|ZP_08386054.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli H299] gi|62288115|sp|P0A6U3|MNMG_ECOLI RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|62288116|sp|P0A6U4|MNMG_ECOL6 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|123343409|sp|Q0TAW8|MNMG_ECOL5 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|123558241|sp|Q31UP0|MNMG_SHIBS RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|166989735|sp|A7ZTV2|MNMG_ECO24 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|166989736|sp|A8A6K4|MNMG_ECOHS RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|189039341|sp|B1IWZ7|MNMG_ECOLC RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|205831506|sp|B1X9W9|MNMG_ECODH RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|226704793|sp|B7NR43|MNMG_ECO7I RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|226704794|sp|B7M597|MNMG_ECO8A RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|226704795|sp|B7NF57|MNMG_ECOLU RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|238058368|sp|B6I3X8|MNMG_ECOSE RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|254811511|sp|B7L889|MNMG_ECO55 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|254811512|sp|B7N2I0|MNMG_ECO81 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|259495846|sp|C4ZZ19|MNMG_ECOBW RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|26110917|gb|AAN83101.1|AE016769_216 Glucose inhibited division protein A [Escherichia coli CFT073] gi|2367273|gb|AAC76764.1| 5-methylaminomethyl-2-thiouridine modification at tRNA U34 [Escherichia coli str. K-12 substr. MG1655] gi|81247510|gb|ABB68218.1| GidA [Shigella boydii Sb227] gi|85676297|dbj|BAE77547.1| glucose-inhibited cell-division protein [Escherichia coli str. K12 substr. W3110] gi|110345674|gb|ABG71911.1| glucose inhibited division protein A [Escherichia coli 536] gi|157068903|gb|ABV08158.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli HS] gi|157077384|gb|ABV17092.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli E24377A] gi|169757150|gb|ACA79849.1| glucose inhibited division protein A [Escherichia coli ATCC 8739] gi|169891077|gb|ACB04784.1| glucose-inhibited cell-division protein [Escherichia coli str. K-12 substr. DH10B] gi|188488625|gb|EDU63728.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Escherichia coli 53638] gi|190909325|gb|EDV68911.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli F11] gi|192930499|gb|EDV83106.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli E22] gi|194413887|gb|EDX30165.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli B171] gi|209914481|dbj|BAG79555.1| glucose inhibited division protein A [Escherichia coli SE11] gi|218354199|emb|CAV00833.1| glucose-inhibited cell-division protein [Escherichia coli 55989] gi|218363081|emb|CAR00719.1| glucose-inhibited cell-division protein [Escherichia coli IAI1] gi|218372577|emb|CAR20451.1| glucose-inhibited cell-division protein [Escherichia coli IAI39] gi|218429593|emb|CAR10551.2| glucose-inhibited cell-division protein [Escherichia coli ED1a] gi|218434484|emb|CAR15411.1| glucose-inhibited cell-division protein [Escherichia coli UMN026] gi|222035454|emb|CAP78199.1| tRNA uridine 5-carboxymethylaminomethyl modification [Escherichia coli LF82] gi|226838925|gb|EEH70952.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Escherichia sp. 1_1_43] gi|227839241|gb|EEJ49707.1| glucose inhibited cell division protein A [Escherichia coli 83972] gi|238861321|gb|ACR63319.1| glucose-inhibited cell-division protein [Escherichia coli BW2952] gi|257761621|dbj|BAI33118.1| glucose-inhibited cell-division protein GidA [Escherichia coli O103:H2 str. 12009] gi|260451402|gb|ACX41824.1| glucose inhibited division protein A [Escherichia coli DH1] gi|281180799|dbj|BAI57129.1| glucose inhibited division protein A [Escherichia coli SE15] gi|284923855|emb|CBG36954.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme (glucose-inhibited division protein A) [Escherichia coli 042] gi|291321699|gb|EFE61135.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli B088] gi|291425669|gb|EFE98705.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Escherichia coli FVEC1412] gi|291431245|gb|EFF04238.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli B185] gi|298276956|gb|EFI18474.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Escherichia coli FVEC1302] gi|300300550|gb|EFJ56935.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 185-1] gi|300306827|gb|EFJ61347.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 200-1] gi|300360056|gb|EFJ75926.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 198-1] gi|300398425|gb|EFJ81963.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 69-1] gi|300408381|gb|EFJ91919.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 45-1] gi|300416294|gb|EFJ99604.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 115-1] gi|300418345|gb|EFK01656.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 182-1] gi|300522950|gb|EFK44019.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 119-7] gi|300531896|gb|EFK52958.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 107-1] gi|300848129|gb|EFK75889.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 78-1] gi|301077256|gb|EFK92062.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 146-1] gi|305850303|gb|EFM50760.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli NC101] gi|306906870|gb|EFN37379.1| glucose inhibited division protein A [Escherichia coli W] gi|307555880|gb|ADN48655.1| glucose-inhibited division protein A [Escherichia coli ABU 83972] gi|308120581|gb|EFO57843.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 145-7] gi|309704189|emb|CBJ03536.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme (glucose-inhibited division protein A) [Escherichia coli ETEC H10407] gi|310334344|gb|EFQ00549.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli 1827-70] gi|312948307|gb|ADR29134.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O83:H1 str. NRG 857C] gi|315063051|gb|ADT77378.1| glucose-inhibited cell-division protein [Escherichia coli W] gi|315138326|dbj|BAJ45485.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Escherichia coli DH1] gi|315292827|gb|EFU52179.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 153-1] gi|315296885|gb|EFU56174.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 16-3] gi|315618551|gb|EFU99137.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli 3431] gi|320186276|gb|EFW61012.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella flexneri CDC 796-83] gi|320201226|gb|EFW75807.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli EC4100B] gi|323161007|gb|EFZ46926.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli E128010] gi|323173366|gb|EFZ58995.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli LT-68] gi|323380887|gb|ADX53155.1| glucose inhibited division protein A [Escherichia coli KO11] gi|323934908|gb|EGB31286.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli E1520] gi|323944217|gb|EGB40297.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli H120] gi|324007991|gb|EGB77210.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 57-2] gi|324012779|gb|EGB81998.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 60-1] gi|324018461|gb|EGB87680.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 117-3] gi|324115903|gb|EGC09829.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli E1167] gi|330908054|gb|EGH36573.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli AA86] gi|331036762|gb|EGI08988.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli H736] gi|331042065|gb|EGI14209.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli M605] gi|331047418|gb|EGI19496.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli M718] gi|331057905|gb|EGI29891.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli TA143] gi|331062654|gb|EGI34574.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli TA271] gi|331067670|gb|EGI39072.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli TA280] gi|331073017|gb|EGI44342.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli H591] gi|331077839|gb|EGI49051.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli H299] gi|332089334|gb|EGI94438.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella boydii 3594-74] gi|332345731|gb|AEE59065.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli UMNK88] Length = 629 Score = 824 bits (2129), Expect = 0.0, Method: Composition-based stats. Identities = 293/618 (47%), Positives = 397/618 (64%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + Q + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LL+++KK + Sbjct: 607 VTPAAISILLVWLKKQGM 624 >gi|260857844|ref|YP_003231735.1| glucose-inhibited cell-division protein GidA [Escherichia coli O26:H11 str. 11368] gi|257756493|dbj|BAI27995.1| glucose-inhibited cell-division protein GidA [Escherichia coli O26:H11 str. 11368] gi|323155422|gb|EFZ41605.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli EPECa14] Length = 629 Score = 824 bits (2129), Expect = 0.0, Method: Composition-based stats. Identities = 293/618 (47%), Positives = 397/618 (64%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + Q + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNVSQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LL+++KK + Sbjct: 607 VTPAAISILLVWLKKQGM 624 >gi|331660085|ref|ZP_08361023.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli TA206] gi|331053300|gb|EGI25333.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli TA206] Length = 629 Score = 824 bits (2129), Expect = 0.0, Method: Composition-based stats. Identities = 294/618 (47%), Positives = 398/618 (64%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 EK+ + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVEKDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + Q + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LL+++KK + Sbjct: 607 VTPAAISILLVWLKKQGM 624 >gi|256823852|ref|YP_003147815.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Kangiella koreensis DSM 16069] gi|256797391|gb|ACV28047.1| glucose inhibited division protein A [Kangiella koreensis DSM 16069] Length = 628 Score = 824 bits (2129), Expect = 0.0, Method: Composition-based stats. Identities = 293/619 (47%), Positives = 391/619 (63%), Gaps = 5/619 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 Y VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GKGHLV+EID Sbjct: 5 EKYSVIVIGGGHAGTEAALASARMGVKTLLLTHNIETLGQMSCNPAIGGIGKGHLVKEID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M + D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NL + Q Sbjct: 65 ALGGAMAQAIDRAGIQFRTLNASKGPAVRATRAQADRGLYRSAIREILENQPNLTIFQNA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E++ + + Q +VVLT GTFL G+IHIG GR GD PS +L Sbjct: 125 VVDLIVEQDKVQGVKTQMGLDFYAPSVVLTVGTFLGGLIHIGMQNHSGGRAGDPPSIALA 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQIECGI 242 + + F RLKTGTP R+D K++ + E+Q D + FSFM T RQI C I Sbjct: 185 DRLRELPFRVDRLKTGTPPRIDAKSVDFSVMEEQAGDNPVPTFSFMGTADQHPRQISCWI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II + S +YSG I+ GPRYCPSIEDKI+RF ++N HQIF+EPEGLN+ Sbjct: 245 THTNDATHDIIRSGLDRSPMYSGVIEGVGPRYCPSIEDKIMRFSDKNSHQIFVEPEGLNS 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + +YPNGIST+LP ++Q +R+I G E +I RPGYAIEYDY +P++L +LETK I G Sbjct: 305 NELYPNGISTSLPFDVQMDLVRSIKGFENAHITRPGYAIEYDYFDPRDLKASLETKFIDG 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEA AQGL+AG+N+A + + R +YIGV+IDDL ++G E Sbjct: 365 LFFAGQINGTTGYEEAGAQGLIAGMNAALQVQDKEAWSPRRDQAYIGVLIDDLITRGTQE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT G +LG + + R F+ + + +K+LV Sbjct: 425 PYRMFTSRAEYRLILREDNADLRLTEKGRELGMVSDDRWSAFSDKKEAIERETARIKNLV 484 Query: 483 LTSKNLSSTSIS---FKQDGKTRTAYEFLSYPDFSIQNLFSICPDARK-FSSLVIERLQI 538 + + + ++ K + E L PD + L ++ + + V E+++I Sbjct: 485 VQPDSPAGQQLNQQLEKPLSRAYKGEELLRRPDVTYAGLMALPGMIEQPVPAKVAEQVEI 544 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + Y+ Y RQ E + E ++PKD DYS + LSNE+ +KL +KP + QA ++ Sbjct: 545 QIKYSGYIDRQKDEIERSLRNENTVLPKDLDYSQVKGLSNEVVQKLMNIKPETIGQAGRV 604 Query: 599 EGMTPAALNLLLIYIKKNT 617 G+TPAA++LLL+++KK Sbjct: 605 SGVTPAAISLLLVHLKKRQ 623 >gi|300940927|ref|ZP_07155453.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 21-1] gi|300454357|gb|EFK17850.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 21-1] Length = 629 Score = 824 bits (2128), Expect = 0.0, Method: Composition-based stats. Identities = 292/618 (47%), Positives = 397/618 (64%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + Q + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P + E+++I+ Sbjct: 487 PSAEAAADVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFSPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LL+++KK + Sbjct: 607 VTPAAISILLVWLKKQGM 624 >gi|261250648|ref|ZP_05943223.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio orientalis CIP 102891] gi|260939217|gb|EEX95204.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio orientalis CIP 102891] Length = 631 Score = 824 bits (2128), Expect = 0.0, Method: Composition-based stats. Identities = 284/623 (45%), Positives = 389/623 (62%), Gaps = 5/623 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + +DVIV+GGGHAG EAA +A+ G +T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHEKFDVIVVGGGHAGTEAALASARTGQNTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D +GIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAQAIDHSGIQFRTLNASKGPAVRATRAQADRALYKAYVRHALENAPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + ++ +V Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQSVDDLIVENDQVTGVVTQMGLRFHAKAVVLTVGTFLGGKIHIGMESSSGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D +++ + E Q D FSFM + + RQI Sbjct: 182 ALADRLRELPFRVDRLKTGTPPRIDARSVDFSDLEVQHGDTPAPVFSFMGKREHHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CFITHTNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L+T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LDTHELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 ISGLF AGQINGTTGYEEAAAQGL+AG+N++ S D R +Y+GV+IDDL++ G Sbjct: 362 ISGLFFAGQINGTTGYEEAAAQGLMAGLNASLHSQGKDGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG I + R RF + I R LK Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTAQARELGLIDDARWARFNEKIDNMESERQRLK 481 Query: 480 SLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIER 535 + + K+ + + + + + L P+ + L + A E+ Sbjct: 482 DIWMNPKSAGVDALNGLLKTPMAREASGEDLLRRPEITYAQLTELDAFAPALEDQQAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y RQ E ++ E +P D DYS + LSNE+ KL KP ++ A Sbjct: 542 VEIQVKYEGYIKRQQDEIEKSLRHENTKLPLDLDYSQVKGLSNEVVAKLGEAKPESIGIA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV 618 S+I G+TPAA+++LL+++KK+ + Sbjct: 602 SRISGITPAAISILLVHLKKHGM 624 >gi|260870475|ref|YP_003236877.1| glucose-inhibited cell-division protein GidA [Escherichia coli O111:H- str. 11128] gi|257766831|dbj|BAI38326.1| glucose-inhibited cell-division protein GidA [Escherichia coli O111:H- str. 11128] gi|323177761|gb|EFZ63345.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli 1180] Length = 629 Score = 823 bits (2127), Expect = 0.0, Method: Composition-based stats. Identities = 293/618 (47%), Positives = 398/618 (64%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + Q + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N++ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLERSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LL+++KK + Sbjct: 607 VTPAAISILLVWLKKQGM 624 >gi|170680590|ref|YP_001746071.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli SMS-3-5] gi|205831507|sp|B1LL68|MNMG_ECOSM RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|170518308|gb|ACB16486.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli SMS-3-5] Length = 629 Score = 823 bits (2127), Expect = 0.0, Method: Composition-based stats. Identities = 293/618 (47%), Positives = 397/618 (64%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDLAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + Q + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LL+++KK + Sbjct: 607 VTPAAISILLVWLKKQGM 624 >gi|300902977|ref|ZP_07120920.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 84-1] gi|301305610|ref|ZP_07211700.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 124-1] gi|300404972|gb|EFJ88510.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 84-1] gi|300839118|gb|EFK66878.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 124-1] gi|315254566|gb|EFU34534.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 85-1] Length = 629 Score = 823 bits (2127), Expect = 0.0, Method: Composition-based stats. Identities = 293/618 (47%), Positives = 397/618 (64%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + Q + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHYVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LL+++KK + Sbjct: 607 VTPAAISILLVWLKKQGM 624 >gi|194435665|ref|ZP_03067768.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli 101-1] gi|253775624|ref|YP_003038455.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254163692|ref|YP_003046800.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli B str. REL606] gi|300932376|ref|ZP_07147641.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 187-1] gi|194425208|gb|EDX41192.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli 101-1] gi|242379279|emb|CAQ34086.1| protein involved in a tRNA modification pathway, subunit of complex involved in modification of tRNA [Escherichia coli BL21(DE3)] gi|253326668|gb|ACT31270.1| glucose inhibited division protein A [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975593|gb|ACT41264.1| glucose-inhibited division protein A [Escherichia coli B str. REL606] gi|253979750|gb|ACT45420.1| glucose-inhibited division protein A [Escherichia coli BL21(DE3)] gi|300459881|gb|EFK23374.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 187-1] gi|323971220|gb|EGB66466.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli TA007] Length = 629 Score = 823 bits (2127), Expect = 0.0, Method: Composition-based stats. Identities = 293/618 (47%), Positives = 397/618 (64%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGLMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + Q + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LL+++KK + Sbjct: 607 VTPAAISILLVWLKKQGM 624 >gi|320174632|gb|EFW49768.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella dysenteriae CDC 74-1112] Length = 629 Score = 823 bits (2127), Expect = 0.0, Method: Composition-based stats. Identities = 294/618 (47%), Positives = 398/618 (64%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DGLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 DGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + Q + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LL+++KK + Sbjct: 607 VTPAAISILLVWLKKQGM 624 >gi|74314233|ref|YP_312652.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella sonnei Ss046] gi|123615766|sp|Q3YVP5|MNMG_SHISS RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|73857710|gb|AAZ90417.1| GldA [Shigella sonnei Ss046] gi|323167015|gb|EFZ52754.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella sonnei 53G] Length = 629 Score = 823 bits (2127), Expect = 0.0, Method: Composition-based stats. Identities = 292/618 (47%), Positives = 396/618 (64%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + Q + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+ G+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLVGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LL+++KK + Sbjct: 607 VTPAAISILLVWLKKQGM 624 >gi|84394517|ref|ZP_00993227.1| glucose inhibited division protein A [Vibrio splendidus 12B01] gi|84374870|gb|EAP91807.1| glucose inhibited division protein A [Vibrio splendidus 12B01] Length = 631 Score = 823 bits (2126), Expect = 0.0, Method: Composition-based stats. Identities = 281/623 (45%), Positives = 386/623 (61%), Gaps = 5/623 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + +DVIV+GGGHAG EAA +A+ G ST L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHEKFDVIVVGGGHAGTEAALASARTGQSTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAFVRNVLENTPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E++ + +V Q R + VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQSVDDLIVEQDQVVGVVTQMGLKFRANAVVLTVGTFLGGKIHIGMESSSGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT-NRQIE 239 +L + F RLKTGTP R+D +++ + + E Q D FSFM + RQI Sbjct: 182 ALADRLRDLPFRVDRLKTGTPPRIDARSVDFSELEVQHGDNPTPVFSFMGSRAQQPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CYITHTNENTHDVIRANLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q + + ++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTHELYPNGISTSLPFDVQVKIVHSMKGFENAHIVRPGYAIEYDFFDPRDLKLTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG+N++ + + R +Y+GV+IDDL++ G Sbjct: 362 IKGLFFAGQINGTTGYEEAAAQGLMAGLNASLFTQGKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG + + R RF + ++ R LK Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADIRLTEKSRELGLVDDARWVRFNEKVENMEKERQRLK 481 Query: 480 SLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIER 535 + K+ I + + + L P+ + L ++ E+ Sbjct: 482 ETWINPKSEDVDQLNQILKTPMSREASGEDLLRRPEMTYSQLTALDRFGPALEDQQASEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y RQ E ++ E +P D DYS + LSNE+ KL+ KP ++ A Sbjct: 542 VEIQVKYDGYIQRQQDEIEKSLRHENTKLPADIDYSKVKGLSNEVVLKLTTAKPDSIGIA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV 618 S+I G+TPAA+++LL+Y+KK+ + Sbjct: 602 SRISGITPAAISILLVYLKKHGL 624 >gi|326340511|gb|EGD64310.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli O157:H7 str. 1044] Length = 629 Score = 823 bits (2126), Expect = 0.0, Method: Composition-based stats. Identities = 293/618 (47%), Positives = 398/618 (64%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYRGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + Q + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S+ + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSDDKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LL+++KK + Sbjct: 607 VTPAAISILLVWLKKQGM 624 >gi|332995988|gb|EGK15615.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella flexneri VA-6] Length = 629 Score = 823 bits (2126), Expect = 0.0, Method: Composition-based stats. Identities = 292/618 (47%), Positives = 397/618 (64%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR YR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVRYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK-ITNRQIECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASLHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LL+++KK + Sbjct: 607 VTPAAISILLVWLKKQGM 624 >gi|323959807|gb|EGB55457.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli H489] Length = 629 Score = 823 bits (2125), Expect = 0.0, Method: Composition-based stats. Identities = 293/618 (47%), Positives = 398/618 (64%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGLMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + Q + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N++ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLERSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LL+++KK + Sbjct: 607 VTPAAISILLVWLKKQGM 624 >gi|24115044|ref|NP_709554.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella flexneri 2a str. 301] gi|30064954|ref|NP_839125.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella flexneri 2a str. 2457T] gi|81170577|sp|Q83PJ6|MNMG_SHIFL RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|205831561|sp|Q0SYT5|MNMG_SHIF8 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|24054304|gb|AAN45261.1| glucose-inhibited division protein GidA [Shigella flexneri 2a str. 301] gi|30043215|gb|AAP18936.1| glucose-inhibited division protein GidA [Shigella flexneri 2a str. 2457T] gi|281603139|gb|ADA76123.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Shigella flexneri 2002017] gi|313647643|gb|EFS12091.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella flexneri 2a str. 2457T] gi|332750750|gb|EGJ81158.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella flexneri 4343-70] gi|332750896|gb|EGJ81302.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella flexneri K-671] gi|332751672|gb|EGJ82070.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella flexneri 2747-71] gi|332764002|gb|EGJ94239.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella flexneri 2930-71] gi|332997296|gb|EGK16912.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella flexneri K-218] gi|333013465|gb|EGK32836.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella flexneri K-304] Length = 629 Score = 823 bits (2125), Expect = 0.0, Method: Composition-based stats. Identities = 292/618 (47%), Positives = 397/618 (64%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR YR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVRYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK-ITNRQIECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + +Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASLHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQISGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LL+++KK + Sbjct: 607 VTPAAISILLVWLKKQGM 624 >gi|91213268|ref|YP_543254.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli UTI89] gi|117626012|ref|YP_859335.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli APEC O1] gi|218560816|ref|YP_002393729.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli S88] gi|237703542|ref|ZP_04534023.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Escherichia sp. 3_2_53FAA] gi|122421808|sp|Q1R4J1|MNMG_ECOUT RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|166222932|sp|A1AHS1|MNMG_ECOK1 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|226704792|sp|B7MGG1|MNMG_ECO45 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|91074842|gb|ABE09723.1| glucose-inhibited division protein A [Escherichia coli UTI89] gi|115515136|gb|ABJ03211.1| glucose-inhibited division protein A [Escherichia coli APEC O1] gi|218367585|emb|CAR05369.1| glucose-inhibited cell-division protein [Escherichia coli S88] gi|226902806|gb|EEH89065.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Escherichia sp. 3_2_53FAA] gi|294493839|gb|ADE92595.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli IHE3034] gi|307628815|gb|ADN73119.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli UM146] gi|315285542|gb|EFU44984.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 110-3] gi|323949984|gb|EGB45868.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli H252] gi|323954964|gb|EGB50742.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli H263] Length = 629 Score = 823 bits (2125), Expect = 0.0, Method: Composition-based stats. Identities = 294/618 (47%), Positives = 397/618 (64%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + Q + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ERN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFAERNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LL+++KK + Sbjct: 607 VTPAAISILLVWLKKQGM 624 >gi|271502656|ref|YP_003335682.1| glucose inhibited division protein A [Dickeya dadantii Ech586] gi|270346211|gb|ACZ78976.1| glucose inhibited division protein A [Dickeya dadantii Ech586] Length = 629 Score = 822 bits (2124), Expect = 0.0, Method: Composition-based stats. Identities = 289/618 (46%), Positives = 389/618 (62%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA+ Sbjct: 7 FDVIVIGGGHAGTEAAMASARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAM 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM R D GIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMARAIDRGGIQFRILNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLTLFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS +L + Sbjct: 127 DLIVENDQVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIALSHR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + GRLKTGTP R+D +TI + Q D+ + FSF+ + + Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLTPQHGDDPMPVFSFLGNASEHPAQMPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNERTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G++ I+RPGYAIEYDY +P++L PTLE+K I LF Sbjct: 307 IYPNGISTSLPFDVQWQIVRSMDGMQNARIVRPGYAIEYDYFDPRDLKPTLESKFIHNLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQG++AG+N+AR + D R +YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGMLAGLNAARLAFDQDGWTPRRDQAYIGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R L+ +++ Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTAIGRELGMVDDERWARFNEKLENIEKERQRLRDILVH 486 Query: 485 SKNLSSTSISF---KQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 I+ + + L P+ L ++ A E+++I+ Sbjct: 487 PNTEGVEQINRLLKSPLSREANGEDLLRRPEMDYAQLTALPMFAPALPDVQATEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P D DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPADLDYRQVSGLSNEVIAKLNDHKPGSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LL+++KK + Sbjct: 607 ITPAAISILLVWLKKQGM 624 >gi|157144377|ref|YP_001451696.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Citrobacter koseri ATCC BAA-895] gi|166222924|sp|A8ACP7|MNMG_CITK8 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|157081582|gb|ABV11260.1| hypothetical protein CKO_00081 [Citrobacter koseri ATCC BAA-895] Length = 629 Score = 822 bits (2124), Expect = 0.0, Method: Composition-based stats. Identities = 293/618 (47%), Positives = 396/618 (64%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG +GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSSGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + RLKTGTP R+D +TI + +Q D + FSFM + + Q + C IT Sbjct: 187 LRELPLRVSRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEMGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 S+ ++ + + + L P+ + L S+ P A E+++I+ Sbjct: 487 PSAESAGEVNAHLTAPLSREASGEDLLRRPEMTYAQLTSLTPFAPGLDDAQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPVSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LL+++KK + Sbjct: 607 VTPAAISILLVWLKKQGM 624 >gi|323496917|ref|ZP_08101945.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio sinaloensis DSM 21326] gi|323317991|gb|EGA70974.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio sinaloensis DSM 21326] Length = 631 Score = 822 bits (2124), Expect = 0.0, Method: Composition-based stats. Identities = 284/623 (45%), Positives = 388/623 (62%), Gaps = 5/623 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA +A+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHENFDVIVVGGGHAGTEAALASARTGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAKAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVREALENAPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + +V Q R VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQSVDDLIVENDKAVGVVTQMGLRFRAEAVVLTVGTFLGGKIHIGMESSSGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IE 239 +L + + F RLKTGTP R+D +T+ + + E Q D FSFM + + Q I Sbjct: 182 ALADRLRELPFRVDRLKTGTPPRIDARTVDFSELEVQHGDNPTPVFSFMGQRSQHPQQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CFITHTNEQTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTHELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 ISGLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 ISGLFFAGQINGTTGYEEAAAQGLMAGLNASLYSQNKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG I + R RF + ++ R LK Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLIDDERWARFNEKVENMAKERQRLK 481 Query: 480 SLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIER 535 + K+ + + + + + L P+ + L + A E+ Sbjct: 482 ETWMNPKSEGIDALNQLLKSPMAREASGEDLLRRPEMTYDQLTQLEAFAPAMEDQQAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y RQ E ++ E +P D DY+ + LSNE+ KLS KP ++ A Sbjct: 542 VEIQVKYEGYIKRQQDEIEKSLRHENTKLPVDLDYAKVSGLSNEVVAKLSQAKPESIGIA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV 618 S+I G+TPAA+++LL+++KK+ + Sbjct: 602 SRISGITPAAISILLVHLKKHGL 624 >gi|320193714|gb|EFW68347.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli WV_060327] Length = 629 Score = 822 bits (2124), Expect = 0.0, Method: Composition-based stats. Identities = 295/618 (47%), Positives = 398/618 (64%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARIGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 EK+ + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVEKDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + Q + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 ++ ++ + + + L P+ + + L S+ P A E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTSLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LL+++KK + Sbjct: 607 VTPAAISILLVWLKKQGM 624 >gi|256021237|ref|ZP_05435102.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella sp. D9] gi|332282464|ref|ZP_08394877.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Shigella sp. D9] gi|332104816|gb|EGJ08162.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Shigella sp. D9] Length = 629 Score = 822 bits (2123), Expect = 0.0, Method: Composition-based stats. Identities = 292/618 (47%), Positives = 397/618 (64%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + Q + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I G+F Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGMF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LL+++KK + Sbjct: 607 VTPAAISILLVWLKKQGM 624 >gi|307823023|ref|ZP_07653253.1| glucose inhibited division protein A [Methylobacter tundripaludum SV96] gi|307735798|gb|EFO06645.1| glucose inhibited division protein A [Methylobacter tundripaludum SV96] Length = 623 Score = 822 bits (2123), Expect = 0.0, Method: Composition-based stats. Identities = 298/621 (47%), Positives = 400/621 (64%), Gaps = 4/621 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 R +DVIV+GGGHAG EAA +A+ GA+T L+T T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 FRRDFDVIVVGGGHAGTEAALASARCGANTLLLTQNIDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DAL G+M + D GIQFR LN KGPAVR R QADR+LY+ A++ + +Q NL + Q Sbjct: 63 VDALGGVMAQAIDRGGIQFRTLNASKGPAVRATRAQADRQLYKQAVRTALENQPNLALFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V+ E + ++ + Q VVLTTGTFL G IHIG GR GD S + Sbjct: 123 QTVSDLIVEGDRVAGVKTQMGLNFTARAVVLTTGTFLGGKIHIGLENYSGGRAGDPASIA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIEC 240 L + F RLKTGTP R+DG+TI + K E+Q DE + FSF+ + RQI C Sbjct: 183 LAERLRELPFRIDRLKTGTPPRIDGRTIDFSKLEEQHGDEPVPVFSFIGKPEHHPRQIPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 ITRTN +TH II + S +YSG I+ GPRYCPSIEDK+VRF +R+ HQIF+EPEGL Sbjct: 243 HITRTNNKTHDIIRSGLDRSPLYSGIIEGIGPRYCPSIEDKVVRFADRDSHQIFVEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 NT +YPNGIST+LP ++Q++F+R++ G E I+RPGYAIEYD+ +P++L +LETK + Sbjct: 303 NTHEIYPNGISTSLPFDVQYEFVRSMLGFENAEIVRPGYAIEYDFFDPRDLKSSLETKHM 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 + LF AGQ+NGTTGYEEAAAQGL+AG+N+AR LD C R ++YIGVMIDDL ++G Sbjct: 363 NALFFAGQVNGTTGYEEAAAQGLIAGLNAARLVQGLDSWCPGRDEAYIGVMIDDLITRGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT G +LG + + R + F L+ LK Sbjct: 423 QEPYRMFTSRAEYRLLLREDNADLRLTEKGRELGLVDDARWQAFEIKRASIAQLQDDLKK 482 Query: 481 LVLTSKNLSSTSIS---FKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 + ++ + + K + + L P+ ++ L S A V E+++ Sbjct: 483 KWVRTETAEAGQVEQYWGKPLLREANLMDLLRRPEVDVKQLLSFMDSAEDMDPQVAEQVE 542 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I++ YA Y RQ E + + +P+ DY+ +P LSNE+ EKL +P L QAS+ Sbjct: 543 IQAKYAGYIDRQQTEIDKALRYDHLRLPEVIDYNGIPGLSNEVSEKLKKQRPETLGQASR 602 Query: 598 IEGMTPAALNLLLIYIKKNTV 618 I G+TPAA++LLL+Y+KK + Sbjct: 603 IPGITPAAISLLLVYLKKKSA 623 >gi|88860625|ref|ZP_01135262.1| tRNA modification, oxidoreductase-like with FAD/NAD(P)-binding domain [Pseudoalteromonas tunicata D2] gi|88817220|gb|EAR27038.1| tRNA modification, oxidoreductase-like with FAD/NAD(P)-binding domain [Pseudoalteromonas tunicata D2] Length = 629 Score = 822 bits (2123), Expect = 0.0, Method: Composition-based stats. Identities = 290/623 (46%), Positives = 395/623 (63%), Gaps = 5/623 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + +DVIV+GGGHAG EAA +A++G +T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 IFHEHFDVIVVGGGHAGTEAALASARMGMNTLLLTHNMDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G M + D GIQFR LN KGPAVR R QADR+LY+ A+Q+ + +QENL + Sbjct: 62 EIDALGGAMAQAIDKGGIQFRTLNSSKGPAVRATRAQADRKLYKEAIQQTLQNQENLKIF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q E + + +V Q +VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQSCDDLIVENDHVVGVVTQMGLRFSSRSVVLTVGTFLGGQIHIGMESFSGGRAGDQPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIE 239 +L + F RLKTGTP R+D +T+ + K + Q D FSFM + + QI Sbjct: 182 ALAKRLRELPFRVSRLKTGTPPRIDARTVDFSKMQIQPGDTPTPVFSFMGKQSDHPTQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDKI+RF +++ HQIF+EPEG Sbjct: 242 CYITYTNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKIMRFADKDRHQIFVEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +++I G E +I RPGYAIEYD+ +P++L +LETK Sbjct: 302 LTTHELYPNGISTSLPFDVQLQIVQSITGFENAHICRPGYAIEYDFFDPRDLKQSLETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 ISGLF AGQINGTTGYEEAAAQGL+AG+N+A + D R ++Y GV+IDDL + G Sbjct: 362 ISGLFFAGQINGTTGYEEAAAQGLIAGMNAALQVQGKDAWTPRRDEAYAGVLIDDLATLG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT G +LG + + R F I+E LK Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTAKGRELGLVNDERWAAFNIKIEEIEKEAQRLK 481 Query: 480 SLVL---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI-CPDARKFSSLVIER 535 + + + + ++ + + E + P+ + L I + + +E+ Sbjct: 482 EVWIHKDHPQLEAVNNLLKAPLSREASLEELIRRPEVTYNELVKIEGLGSESTNEQALEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ YA Y RQ E + E L+P D+DY+++ LSNE+ KLS ++P + QA Sbjct: 542 VEIQIKYAGYIARQQEEIDKQLRHEMTLLPADYDYAAVSGLSNEVVAKLSDVRPQTIGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV 618 S+I G+TPAA++LLL+Y+KK + Sbjct: 602 SRISGITPAAISLLLVYLKKQGL 624 >gi|307133313|ref|YP_003885329.1| glucose-inhibited cell-division protein [Dickeya dadantii 3937] gi|306530842|gb|ADN00773.1| glucose-inhibited cell-division protein [Dickeya dadantii 3937] Length = 629 Score = 821 bits (2122), Expect = 0.0, Method: Composition-based stats. Identities = 289/618 (46%), Positives = 388/618 (62%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA+ Sbjct: 7 FDVIVIGGGHAGTEAAMASARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAM 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAHAIDRAGIQFRILNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLTLFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS SL + Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSISLSHR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + GRLKTGTP R+D +TI + Q D+ + FSF+ + Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAPQHGDDPMPVFSFLGKAGEHPTQMPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNERTHDVIRSNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+ I+RPGYAIEYDY +P++L PTLE+K I LF Sbjct: 307 IYPNGISTSLPFDVQWQIVRSMDGMANARIVRPGYAIEYDYFDPRDLKPTLESKFIHNLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQG++AG+N+AR + + R +YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGMLAGLNAARLAFDQEGWTPRRDQAYIGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R L+ +++ Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTAMGRELGMVDDERWARFNEKLENIEKERQRLRDVLVH 486 Query: 485 SKNLSSTSISF---KQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 + I+ + E L P+ L + A + E+++I+ Sbjct: 487 PQTEGVEQINSLLKSPLSREANGEELLRRPEMDYAQLTGLAMFAPALSDAEAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P D DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPADLDYRQVTGLSNEVIAKLNDHKPGSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LL+++KK + Sbjct: 607 VTPAAISILLVWLKKQGM 624 >gi|312882250|ref|ZP_07741996.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio caribbenthicus ATCC BAA-2122] gi|309370094|gb|EFP97600.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio caribbenthicus ATCC BAA-2122] Length = 632 Score = 821 bits (2122), Expect = 0.0, Method: Composition-based stats. Identities = 279/631 (44%), Positives = 394/631 (62%), Gaps = 7/631 (1%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + +DVIV+GGGHAG EAA +A+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHEKFDVIVVGGGHAGTEAALASARTGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ G+M + D +GIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGIMAKAIDHSGIQFRTLNASKGPAVRATRAQADRALYKAYIRHALENAANLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E++ + ++ Q +VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQSVDDLIVEQDRVIGVITQMGLKFFAQSVVLTVGTFLGGKIHIGMESSSGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D +++ + E Q D+ FSF+ + + RQI Sbjct: 182 ALADRLRELPFRVDRLKTGTPPRIDARSVDFSGLEVQHGDDPAPVFSFLGHRAQHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +++ HQIF+EPEG Sbjct: 242 CFITHTNEATHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKSSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L+T +YPNGIST+LP ++Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LDTHELYPNGISTSLPFDVQVDIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 IQGLFFAGQINGTTGYEEAAAQGLMAGLNASLYSQGKEGWNPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG + + R +RF + I+ R LK Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADIRLTEQARELGLVDDERWQRFNQKIENIELERQRLK 481 Query: 480 SLVLTSKNLSSTSIS---FKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIER 535 ++ + K+ ++ + + + L P+ + L + + E+ Sbjct: 482 NIWMNPKSEGIADLNQYLKSPMVREASGEDLLRRPELNYLQLTKLAAFSPALEDQQAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y RQ E ++ E +P DFDY + LSNE+ KL+ KP +L A Sbjct: 542 VEIQVKYEGYIKRQQDEIEKSLRHEHTKLPLDFDYQLVKGLSNEVVSKLNESKPESLGIA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV--KLNEIV 624 S+I G+TPAA+++LL+++KK + K E+V Sbjct: 602 SRISGVTPAAISILLVHLKKQGMLKKGEEVV 632 >gi|323189526|gb|EFZ74806.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli RN587/1] Length = 629 Score = 821 bits (2121), Expect = 0.0, Method: Composition-based stats. Identities = 291/618 (47%), Positives = 397/618 (64%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + + AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIEQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + Q + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P + E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFSPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LL+++KK + Sbjct: 607 VTPAAISILLVWLKKQGM 624 >gi|227113932|ref|ZP_03827588.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 629 Score = 821 bits (2121), Expect = 0.0, Method: Composition-based stats. Identities = 289/618 (46%), Positives = 390/618 (63%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA+ Sbjct: 7 FDVIVIGGGHAGTEAAMASARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAM 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM R D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMARAVDQAGIQFRILNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLTIFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLARR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + RLKTGTP R+D +TI + +Q D + FSF+ + + Q+ C IT Sbjct: 187 LRELPLRVNRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFLGNASQHPAQMPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNTHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE K + GLF Sbjct: 307 IYPNGISTSLPFDVQWQIVRSMAGMENARIVRPGYAIEYDFFDPRDLKPTLENKFVHGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQG++AG+N+AR + + R +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGMLAGLNAARLAADKEGWSPRRDQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R L+ + + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEMGRELGMVDDHRWARFNEKLENIEKERQRLRDIHVH 486 Query: 485 S--KNLSSTSISFK-QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 + L + K + E L P+ L ++ A E+++I+ Sbjct: 487 PQSEQLDQVNSLLKTPLSREANGEELLRRPEVDYVQLTALPLFAPGLTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ + E L+P D DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQQRNENALLPADLDYKQVSGLSNEVIAKLNDHKPSSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LLI++KK + Sbjct: 607 ITPAAISILLIWLKKQGL 624 >gi|332998035|gb|EGK17640.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella flexneri K-272] gi|333013715|gb|EGK33080.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella flexneri K-227] Length = 629 Score = 821 bits (2120), Expect = 0.0, Method: Composition-based stats. Identities = 292/618 (47%), Positives = 396/618 (64%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR YR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVRYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + Q + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWVRFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDYKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LL+++KK + Sbjct: 607 VTPAAISILLVWLKKQGM 624 >gi|317494634|ref|ZP_07953046.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917236|gb|EFV38583.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterobacteriaceae bacterium 9_2_54FAA] Length = 629 Score = 821 bits (2120), Expect = 0.0, Method: Composition-based stats. Identities = 287/618 (46%), Positives = 387/618 (62%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMASARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM D GIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMATAIDHGGIQFRILNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD P+ +L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPAIALSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + RLKTGTP R+D +TI + Q+ D FSFM + + Q+ C IT Sbjct: 187 LRELPLRVNRLKTGTPPRIDARTIDFSVLAPQYGDNPSPVFSFMGNASQHPEQMPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNERTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMEGMENARIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+ R +N+ + R +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAGRFANEDEGWSPRRDQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R F + ++ R L+ + + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTAIGRELGLVDDVRWTHFNQKLENIERERQRLREIWVH 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VIERLQIES 540 + ++ + + L P+ L + P A E+++I+ Sbjct: 487 PNSEQVAELNTLLKAPLSREANGEDLLRRPEIDYTKLTQLAPFAPALDDEKAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P D DYS + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQEEIEKHLRNENTLLPADLDYSLVSGLSNEVIAKLNDHKPSSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LLI++KK + Sbjct: 607 ITPAAISILLIWLKKQGL 624 >gi|82779067|ref|YP_405416.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella dysenteriae Sd197] gi|309784452|ref|ZP_07679091.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella dysenteriae 1617] gi|123561167|sp|Q329T0|MNMG_SHIDS RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|81243215|gb|ABB63925.1| glucose-inhibited division [Shigella dysenteriae Sd197] gi|308927959|gb|EFP73427.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella dysenteriae 1617] Length = 629 Score = 821 bits (2120), Expect = 0.0, Method: Composition-based stats. Identities = 292/618 (47%), Positives = 397/618 (64%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + Q + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K + GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFLQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTRVT 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LL+++KK + Sbjct: 607 VTPAAISILLVWLKKQGM 624 >gi|163803608|ref|ZP_02197474.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio sp. AND4] gi|159172602|gb|EDP57460.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio sp. AND4] Length = 631 Score = 821 bits (2120), Expect = 0.0, Method: Composition-based stats. Identities = 279/623 (44%), Positives = 383/623 (61%), Gaps = 5/623 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA +A+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHENFDVIVVGGGHAGTEAALASARTGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAEAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRNALENTPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V ++ + +V Q + VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQSVDDLIVNQDRVVGVVTQMGLKFHANAVVLTVGTFLGGKIHIGMESSSGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT-NRQIE 239 +L + + F RLKTGTP R+D +++ + E Q D FSFM + RQI Sbjct: 182 ALADRLRELPFRVDRLKTGTPPRIDARSVDFSVLEAQHGDNPTPVFSFMGKREHQPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CFITHTNEQTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTHELYPNGISTSLPFDVQVQIVRSMKGFGNAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I+GLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 INGLFFAGQINGTTGYEEAAAQGLMAGLNASLHSQGKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG + + R RF + I R LK Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLVDDARWARFNQKIDNMETERQRLK 481 Query: 480 SLVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIER 535 S + + ++ + + + L P+ L + A E+ Sbjct: 482 STWMNPNSAGIDELNKLLKTPMAREASGEDLLRRPEIVYSTLTQLDAFAPALEDQQASEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y RQ E ++ E +P D DY + LSNE+ KL+ KP ++ A Sbjct: 542 VEIQVKYDGYIKRQQDEIEKSLRHEHTKLPTDLDYQDVKGLSNEVVAKLTEAKPESIGIA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV 618 S+I G+TPAA+++LL+++KK+ + Sbjct: 602 SRISGITPAAISILLVHLKKHGL 624 >gi|261823729|ref|YP_003261835.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pectobacterium wasabiae WPP163] gi|261607742|gb|ACX90228.1| glucose inhibited division protein A [Pectobacterium wasabiae WPP163] Length = 629 Score = 821 bits (2120), Expect = 0.0, Method: Composition-based stats. Identities = 287/618 (46%), Positives = 389/618 (62%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA+ Sbjct: 7 FDVIVIGGGHAGTEAAMASARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAM 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM R D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMARAVDQAGIQFRILNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLTIFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLARR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + RLKTGTP R+D +TI + +Q D + FSF+ + + Q+ C IT Sbjct: 187 LRELPLRVNRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFLGNASQHPAQMPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNTHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE K + GLF Sbjct: 307 IYPNGISTSLPFDVQWQIVRSMAGMENARIVRPGYAIEYDFFDPRDLKPTLENKHVHGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQG++AG+N+AR + + R +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGMLAGLNAARLAADKEGWSPRRDQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R L+ + + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEMGRELGMVDDERWARFNEKLENIEKERQRLRDIHVH 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 ++ I+ + E L P+ L ++ + E+++I+ Sbjct: 487 PQSEQLDQINSLLKTPLSREANGEELLRRPEVDYLQLTALPLFSPGLADEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P D DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENALLPADLDYKQVNGLSNEVIAKLNDHKPSSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LLI++KK + Sbjct: 607 ITPAAISILLIWLKKQGL 624 >gi|332084593|gb|EGI89787.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella boydii 5216-82] Length = 629 Score = 821 bits (2120), Expect = 0.0, Method: Composition-based stats. Identities = 292/618 (47%), Positives = 396/618 (64%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+D L Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDVL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + Q + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFRVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LL+++KK + Sbjct: 607 VTPAAISILLVWLKKQGM 624 >gi|187732565|ref|YP_001882422.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella boydii CDC 3083-94] gi|238691693|sp|B2TUN4|MNMG_SHIB3 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|187429557|gb|ACD08831.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella boydii CDC 3083-94] Length = 629 Score = 820 bits (2119), Expect = 0.0, Method: Composition-based stats. Identities = 292/618 (47%), Positives = 396/618 (64%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+D +TI + +Q + FSFM + + Q + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGGNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LL+++KK + Sbjct: 607 VTPAAISILLVWLKKQGM 624 >gi|302390790|ref|YP_003826611.1| glucose inhibited division protein A [Thermosediminibacter oceani DSM 16646] gi|302201418|gb|ADL08988.1| glucose inhibited division protein A [Thermosediminibacter oceani DSM 16646] Length = 627 Score = 820 bits (2118), Expect = 0.0, Method: Composition-based stats. Identities = 284/620 (45%), Positives = 389/620 (62%), Gaps = 3/620 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV V+G GHAGCEAA +A+LG T + +I M CNP+IGG KGHLVREIDAL Sbjct: 8 YDVAVVGAGHAGCEAALASARLGMKTVVFAINLDSIALMPCNPSIGGPAKGHLVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG+ D IQ R+LN KKGPAVR R QAD++ Y+ +M+ + Q+NLD++QGEV Sbjct: 68 GGEMGKNIDKTLIQMRLLNTKKGPAVRALRAQADKKAYQFSMKYTLEKQQNLDIVQGEVV 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + +V + + V+LTTG +LRG I IG + G G P+N L Sbjct: 128 RVLVEGGRVKGVVTKTGGVYYARAVILTTGVYLRGRIIIGDVSYSGGPNGLFPANELSKC 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 F+ GR KTGTP R+ +I + K +Q DE +IPFS+ T+ I QI C +T T Sbjct: 188 LEALGFELGRFKTGTPPRVHRDSIDFSKMIEQPGDEVIIPFSYETESIKRPQISCWLTYT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N +TH II +N+ + +Y+GDIK GPRYCPSIE KIV F E+ HQ+F+EPEG NT + Sbjct: 248 NEKTHEIIRKNLYRAPLYTGDIKGVGPRYCPSIEVKIVNFPEKESHQVFVEPEGENTCEM 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+ST+LPE++Q + +RTI GLE V ++RPGYAIEYDY+ P +L TLETK+I GL++ Sbjct: 308 YLQGVSTSLPEDVQVELLRTIRGLENVKMMRPGYAIEYDYVIPTQLKLTLETKEIEGLYM 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGT+GYEEAAAQGL+AGIN+A K + + + R+D+YIGV+IDDL +KG EPYR Sbjct: 368 AGQINGTSGYEEAAAQGLIAGINAALKLKERESLVLGRSDAYIGVLIDDLVTKGTDEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 M TSRAEYR+ LR DNAD RLT IG ++G I E R +RF K + L+S +T Sbjct: 428 MLTSRAEYRLLLRHDNADMRLTEIGYRVGLISEERYERFLKKKKMIEEEIERLRSTKITP 487 Query: 486 K---NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSY 542 N + I T + L P+ L ++ P+ + VIE+++I ++Y Sbjct: 488 TAEVNKALEEIGTAPLATPATLEDILKRPEIDYAALKALDPERPELPPEVIEQVEIMTAY 547 Query: 543 AAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMT 602 Y RQ+ + + + E + IP D DY + L E +EKL ++P ++ QAS+I G+ Sbjct: 548 DGYIKRQLKQVENFRKMENKRIPDDIDYDKIHGLRTEAREKLKKIRPASIGQASRISGVN 607 Query: 603 PAALNLLLIYIKKNTVKLNE 622 PA + +LLIY++ + + Sbjct: 608 PADITILLIYLESEKRRREK 627 >gi|227327865|ref|ZP_03831889.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 629 Score = 820 bits (2118), Expect = 0.0, Method: Composition-based stats. Identities = 289/618 (46%), Positives = 390/618 (63%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA+ Sbjct: 7 FDVIVIGGGHAGTEAAMASARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAM 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM R D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMARAVDQAGIQFRILNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLARR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + RLKTGTP R+D +TI + +Q D + FSF+ + + Q+ C IT Sbjct: 187 LRELPLRVNRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFLGNASQHPAQMPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNTHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE K I GLF Sbjct: 307 IYPNGISTSLPFDVQWQIVRSMAGMENARIVRPGYAIEYDFFDPRDLKPTLENKFIHGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQG++AG+N+AR + + R +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGMLAGLNAARLAADKEGWSPRRDQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R L+ + + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEMGRELGMVDDHRWARFNEKLENIEKERQRLRDIHVH 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 ++ I+ + E L P+ L ++ A E+++I+ Sbjct: 487 PQSEQLDQINSLLKTPLSREANGEELLRRPEVDYVQLTALPLFAPGLTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ + E L+P D DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQQRNENALLPADLDYKQVSGLSNEVIAKLNDHKPSSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LLI++KK + Sbjct: 607 ITPAAISILLIWLKKQGL 624 >gi|50123437|ref|YP_052604.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pectobacterium atrosepticum SCRI1043] gi|81170541|sp|Q6CYI6|MNMG_ERWCT RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|49613963|emb|CAG77416.1| glucose inhibited division protein A [Pectobacterium atrosepticum SCRI1043] Length = 629 Score = 819 bits (2117), Expect = 0.0, Method: Composition-based stats. Identities = 289/618 (46%), Positives = 389/618 (62%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA+ Sbjct: 7 FDVIVIGGGHAGTEAAMASARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAM 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM R D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMARAVDQAGIQFRILNSSKGPAVRATRAQADRVLYRQAIRTALENQPNLTIFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLARR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + RLKTGTP R+D +TI + +Q D + FSF+ + + Q+ C IT Sbjct: 187 LRELPLRVNRLKTGTPPRIDARTIDFSVLPQQHGDNPMPVFSFLGNAGQHPAQMPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNTHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE K + GLF Sbjct: 307 IYPNGISTSLPFDVQWQIVRSMAGMENARIVRPGYAIEYDFFDPRDLKPTLENKFVHGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQG++AG+N+AR S + R +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGMLAGLNAARLSADKEGWSPRRDQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R L+ + + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEMGRELGMVDDHRWARFNEKLENIEKERQRLRDIHVH 486 Query: 485 SKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 ++ S+ + E L P+ L ++ A E+++I+ Sbjct: 487 PQSELLDQVNSLLKTPLSREANGEELLRRPEVDYAQLTALPLFAPGLTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P D DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENALLPADLDYKQVNGLSNEVIAKLNDHKPSSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LLI++KK + Sbjct: 607 ITPAAISILLIWLKKQGL 624 >gi|320180077|gb|EFW55019.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella boydii ATCC 9905] Length = 629 Score = 819 bits (2117), Expect = 0.0, Method: Composition-based stats. Identities = 293/618 (47%), Positives = 397/618 (64%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + Q + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFRVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTRVT 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LL+++KK + Sbjct: 607 VTPAAISILLVWLKKQGM 624 >gi|262392793|ref|YP_003284647.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio sp. Ex25] gi|262336387|gb|ACY50182.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio sp. Ex25] Length = 631 Score = 819 bits (2117), Expect = 0.0, Method: Composition-based stats. Identities = 284/623 (45%), Positives = 384/623 (61%), Gaps = 5/623 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA +A+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHENFDVIVVGGGHAGTEAALASARTGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAEAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRNALENAPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E++ +V Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQSVDDLIVEQDRAVGVVTQMGLRFHAKAVVLTVGTFLGGKIHIGMESSSGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D +T+ + E Q D FSFM + + RQI Sbjct: 182 ALADRLRELPFRVDRLKTGTPPRIDARTVDFSVLEAQHGDNPTPVFSFMGKREQHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CFITHTNEQTHDVIRSNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTHELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 IHGLFFAGQINGTTGYEEAAAQGLMAGLNASLYSQDKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG I R RF + + R LK Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLIDNVRWARFNEKLNNMETERQRLK 481 Query: 480 SLVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIER 535 S + K+ ++ + + + L P+ + L + A E+ Sbjct: 482 STWMNPKSEGVDELNKLLKTPMAREASGEDLLRRPEITYSQLTQLEAFAPALEDQQAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y RQ E ++ E +P D DY + LSNE+ KLS KP ++ A Sbjct: 542 VEIQVKYDGYIKRQQEEIEKSLRHENTKLPADLDYRDVKGLSNEVVAKLSEAKPESIGIA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV 618 S+I G+TPAA+++LL+++KK+ + Sbjct: 602 SRISGITPAAISILLVHLKKHGL 624 >gi|91229124|ref|ZP_01262897.1| glucose-inhibited division protein A [Vibrio alginolyticus 12G01] gi|269965286|ref|ZP_06179407.1| glucose-inhibited division protein A [Vibrio alginolyticus 40B] gi|91187436|gb|EAS73779.1| glucose-inhibited division protein A [Vibrio alginolyticus 12G01] gi|269830087|gb|EEZ84315.1| glucose-inhibited division protein A [Vibrio alginolyticus 40B] Length = 631 Score = 819 bits (2117), Expect = 0.0, Method: Composition-based stats. Identities = 284/623 (45%), Positives = 385/623 (61%), Gaps = 5/623 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA +A+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHENFDVIVVGGGHAGTEAALASARTGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAEAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRNALENAPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E++ +V Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQSVDDLIVEQDRAVGVVTQMGLRFHAKAVVLTVGTFLGGKIHIGMESSSGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D +T+ + E Q D FSFM + + RQI Sbjct: 182 ALADRLRELPFRVDRLKTGTPPRIDARTVDFSVLEAQHGDNPTPVFSFMGKREQHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CFITHTNEQTHDVIRSNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTHELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 IHGLFFAGQINGTTGYEEAAAQGLMAGLNASLFSQDKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG I + R RF + I R LK Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLIDDVRWARFNEKINNMETERQRLK 481 Query: 480 SLVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIER 535 + + K+ ++ + + + L P+ + L + A E+ Sbjct: 482 ATWMNPKSEGVDELNKLLKTPMAREASGEDLLRRPEITYSQLTQLEAFAPALEDQQAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y RQ E ++ E +P D DY + LSNE+ KLS KP ++ A Sbjct: 542 VEIQVKYDGYIKRQQEEIEKSLRHENTKLPADLDYRDVKGLSNEVVAKLSEAKPESIGIA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV 618 S+I G+TPAA+++LL+++KK+ + Sbjct: 602 SRISGITPAAISILLVHLKKHGL 624 >gi|253690608|ref|YP_003019798.1| glucose inhibited division protein A [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259495849|sp|C6DJG3|MNMG_PECCP RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|251757186|gb|ACT15262.1| glucose inhibited division protein A [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 629 Score = 819 bits (2117), Expect = 0.0, Method: Composition-based stats. Identities = 289/618 (46%), Positives = 389/618 (62%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA+ Sbjct: 7 FDVIVIGGGHAGTEAAMASARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDAM 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM R D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMARAVDQAGIQFRILNSSKGPAVRATRAQADRVLYRQAIRTALENQPNLTIFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLARR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + RLKTGTP R+D +TI + +Q D + FSF+ + + Q+ C IT Sbjct: 187 LRELPLRVNRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFLGNASQHPAQMPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNTHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE K + GLF Sbjct: 307 IYPNGISTSLPFDVQWQIVRSMTGMENARIVRPGYAIEYDFFDPRDLKPTLENKFVHGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQG++AG+N+AR + + R +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGMLAGLNAARLAADKEGWSPRRDQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R L+ + + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGMVDDHRWARFNEKLESIEKERQRLRDIHIH 486 Query: 485 SKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 ++ S+ + E L P+ L ++ A E+++I+ Sbjct: 487 PQSELLDQVNSLLKTPLSREANGEELLRRPEVDYVQLTALPLFAPGLTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P D DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPADLDYKQVNGLSNEVIAKLNDHKPSSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LLI++KK + Sbjct: 607 ITPAAISILLIWLKKQGL 624 >gi|317050169|ref|YP_004117817.1| glucose inhibited division protein A [Pantoea sp. At-9b] gi|316951786|gb|ADU71261.1| glucose inhibited division protein A [Pantoea sp. At-9b] Length = 629 Score = 819 bits (2116), Expect = 0.0, Method: Composition-based stats. Identities = 296/618 (47%), Positives = 390/618 (63%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G T L+TH +G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIVIGGGHAGTEAAMAAARMGQQTLLLTHDIDKLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMATAIDKAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R TVVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKTVVLTVGTFLDGKIHIGMDNYSGGRAGDPPSIPLSKR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 GRLKTGTP R+D +TI + + Q D + FSFM + + Q + C IT Sbjct: 187 LRALPLRVGRLKTGTPPRIDARTIDFSQLAPQHGDNPMPVFSFMGNVSQHPQQVPCWITY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEQTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ GLE I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMKGLENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR+S + R +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARQSADKEGWAPRRDQAYMGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G ++G + + R R+ + ++ R L+ L + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEAGREMGLVDDARWARYNQKLEAIEQERQRLRDLWVH 486 Query: 485 SKNLS---STSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 K+ + SI K + + L P+ + L S+ E+++I+ Sbjct: 487 PKSENVDEVNSILSAPLTKEASGEDLLRRPEMTYALLTSLNSYGPVLADEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E + E L+P D DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQEEIDRQQRNENTLLPVDLDYRQVSGLSNEVIAKLNDHKPSSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LLIY+KK + Sbjct: 607 ITPAAISILLIYLKKQGL 624 >gi|323492998|ref|ZP_08098134.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio brasiliensis LMG 20546] gi|323312734|gb|EGA65862.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio brasiliensis LMG 20546] Length = 631 Score = 819 bits (2116), Expect = 0.0, Method: Composition-based stats. Identities = 286/623 (45%), Positives = 392/623 (62%), Gaps = 5/623 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + +DVIV+GGGHAG EAA +A+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHEKFDVIVVGGGHAGTEAALASARTGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRHALENTPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E++ +V Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQSVDDLIVEQDQAVGVVTQMGLRFYAKAVVLTVGTFLGGKIHIGMESSSGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D +++ + + E Q D FSFM ++ + RQI Sbjct: 182 ALADRLREMPFRVDRLKTGTPPRIDARSVDFSELEVQHGDNPAPVFSFMGNRSQHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CFITHTNEQTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L+T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LDTHELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I+GLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 INGLFFAGQINGTTGYEEAAAQGLMAGLNASLYSQDKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG I + R RF + I R LK Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTAQARELGLIDDARWARFNQKIDNMETERQRLK 481 Query: 480 SLVLTSKN--LSSTSISFKQD-GKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIER 535 + + K+ + + + K + + + L P+ S L + A E+ Sbjct: 482 EIWMNPKSDGVEALNQLLKTPMAREASGEDLLRRPEISYSQLTELEAFAPALEDQQAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y RQ E ++ E +P + DYS++ LSNE+ KLS KP L A Sbjct: 542 VEIQVKYEGYIKRQQEEIEKSLRHEHTKLPAELDYSAVKGLSNEVVAKLSEAKPETLGIA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV 618 S+I G+TPAA+++LL+++KK+ + Sbjct: 602 SRISGITPAAISILLVHLKKHGM 624 >gi|309972266|gb|ADO95467.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Haemophilus influenzae R2846] Length = 629 Score = 819 bits (2116), Expect = 0.0, Method: Composition-based stats. Identities = 295/622 (47%), Positives = 392/622 (63%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +YDVIVIGGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 YTETYDVIVIGGGHAGTEAALAPARMGFKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DA+ GLM AD AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q Sbjct: 63 VDAMGGLMAHAADKAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 E E++ ++ + + R +VVLT GTFL G IHIG GR GD S + Sbjct: 123 QEATDILIEQDRVTGVSTKMGLTFRAKSVVLTAGTFLAGKIHIGLENYEGGRAGDPASVN 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IEC 240 L + RLKTGTP R+D +TI +D KQ D L FSFM + Q I C Sbjct: 183 LSHRLRDLGLRVDRLKTGTPPRIDARTINFDILAKQHGDAVLPVFSFMGSVDDHPQQIPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL Sbjct: 243 YITHTNEQTHEVIRNNLDRSPMYTGVIEGIGPRYCPSIEDKVMRFSDRNSHQIYLEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 ++ VYPNGIST+LP ++Q + ++ GLE I++PGYAIEYDY +P++L PTLETK I Sbjct: 303 TSNEVYPNGISTSLPFDVQMGIVNSMKGLENARIVKPGYAIEYDYFDPRDLKPTLETKSI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 SGLF AGQINGTTGYEEAAAQGL+AGIN+ + D R SY GV++DDL + G Sbjct: 363 SGLFFAGQINGTTGYEEAAAQGLLAGINAGLYVQEKDAWYPRRDQSYTGVLVDDLCTLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYR+FTSRAEYR+ LR DNAD RLTPI +LG I + R RF K ++ R L++ Sbjct: 423 KEPYRVFTSRAEYRLLLREDNADIRLTPIAHELGLIDDARWARFNKKMENIEQERQRLRN 482 Query: 481 LVLTSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 + L ++ + + + + + L P+ + L S+ P +E++ Sbjct: 483 IWLHPRSEYLEEANKVLGSPLVREASGEDLLRRPEMTYDILTSLTPYKPAMEDKEAVEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I Y Y Q E ++ K E IP +FDYS + LSNE++ KL +P ++ QAS Sbjct: 543 EIAIKYQGYIEHQQEEIEKQKRHENTAIPANFDYSKVSGLSNEVRAKLEQHRPVSIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA++++L+ +KK + Sbjct: 603 RISGITPAAISIILVNLKKQGM 624 >gi|168239645|ref|ZP_02664703.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194737365|ref|YP_002116817.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|238690703|sp|B4TN42|MNMG_SALSV RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|194712867|gb|ACF92088.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197287686|gb|EDY27077.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 629 Score = 819 bits (2115), Expect = 0.0, Method: Composition-based stats. Identities = 293/624 (46%), Positives = 396/624 (63%), Gaps = 6/624 (0%) Query: 1 MINRS-YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLV 59 M + +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV Sbjct: 1 MFYQDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLV 60 Query: 60 REIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDV 119 +E+DAL GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Sbjct: 61 KEVDALGGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMI 120 Query: 120 IQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 Q V E + + V Q R VVLT GTFL G IHIG GR GD PS Sbjct: 121 FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPS 180 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-I 238 L + RLKTGTP R+D +TI + +Q D + FSFM + + Q + Sbjct: 181 IPLSRRLRELPLRVSRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQV 240 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPE Sbjct: 241 PCYITHTNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQIFLEPE 300 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL ++ +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K Sbjct: 301 GLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESK 360 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I GLF AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + Sbjct: 361 FIHGLFFAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTL 420 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYRMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R L Sbjct: 421 GTKEPYRMFTSRAEYRLMLREDNADLRLTEMGRELGLVDDERWARFNEKLENIERERQRL 480 Query: 479 KSLVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIE 534 KS +T S+ ++ + + + L P+ + L S+ A E Sbjct: 481 KSTWVTPSAESADEVNTHLTTPLSREASGEDLLRRPEMTYAQLTSLAAFAPALEDEQAAE 540 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ Q Sbjct: 541 QVEIQVKYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQ 600 Query: 595 ASKIEGMTPAALNLLLIYIKKNTV 618 AS+I G+TPAA+++LL+++KK + Sbjct: 601 ASRISGVTPAAISILLVWLKKQGM 624 >gi|148827804|ref|YP_001292557.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Haemophilus influenzae PittGG] gi|166222938|sp|A5UHB8|MNMG_HAEIG RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|148719046|gb|ABR00174.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Haemophilus influenzae PittGG] Length = 629 Score = 819 bits (2115), Expect = 0.0, Method: Composition-based stats. Identities = 296/622 (47%), Positives = 394/622 (63%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +YDVIVIGGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 YTETYDVIVIGGGHAGTEAALAPARMGFKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DA+ GLM AD AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q Sbjct: 63 VDAMGGLMAHAADKAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 E E++ ++ + + + R +VVLT GTFL G IHIG GR GD S + Sbjct: 123 QEATDILIEQDRVTGVSTKMGLIFRAKSVVLTAGTFLAGKIHIGLENYEGGRAGDPASVN 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IEC 240 L + RLKTGTP R+D +TI +D KQ DE L FSFM + Q I C Sbjct: 183 LSHRLRDLGLRVNRLKTGTPPRIDARTINFDILAKQHGDEVLPVFSFMGSVDDHPQQIPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL Sbjct: 243 YITHTNEQTHEVIRNNLDRSPMYTGVIEGIGPRYCPSIEDKVMRFSDRNSHQIYLEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 ++ VYPNGIST+LP ++Q + ++ GLE I++PGYAIEYDY +P++L PTLETK I Sbjct: 303 TSNEVYPNGISTSLPFDVQMGIVNSMKGLENARIVKPGYAIEYDYFDPRDLKPTLETKSI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 SGLF AGQINGTTGYEEAAAQGL+AGIN+ + D R SY GV++DDL + G Sbjct: 363 SGLFFAGQINGTTGYEEAAAQGLLAGINAGLYVQEKDAWYPRRDQSYTGVLVDDLCTLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYR+FTSRAEYR+ LR DNAD RLTPI +LG I E R RF + ++ R L+S Sbjct: 423 KEPYRVFTSRAEYRLLLREDNADIRLTPIAHELGLIDEARWARFNQKMENIEQERQRLRS 482 Query: 481 LVLTSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 + L ++ + + + + + L P+ + L S+ P +E++ Sbjct: 483 IWLHPRSEYLEEANKVLGSPLVREASGEDLLRRPEMTYDILTSLTPYKPAMEDKEAVEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I Y Y Q E ++ K E IP +FDY+ + LSNE++ KL +P ++ QAS Sbjct: 543 EIAIKYQGYIEHQQEEIEKQKRHENTAIPANFDYNKVSGLSNEVRAKLEQHRPVSIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA++++L+ +KK + Sbjct: 603 RISGITPAAISIILVNLKKQGM 624 >gi|16272526|ref|NP_438740.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Haemophilus influenzae Rd KW20] gi|260581443|ref|ZP_05849255.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Haemophilus influenzae RdAW] gi|1169896|sp|P44763|MNMG_HAEIN RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|1573570|gb|AAC22240.1| glucose inhibited division protein (gidA) [Haemophilus influenzae Rd KW20] gi|260091889|gb|EEW75840.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Haemophilus influenzae RdAW] Length = 629 Score = 819 bits (2115), Expect = 0.0, Method: Composition-based stats. Identities = 296/622 (47%), Positives = 394/622 (63%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +YDVIVIGGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 YTETYDVIVIGGGHAGTEAALAPARMGFKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DA+ GLM AD AGIQFR LN KGPAVR R Q+DR LYR A++ + +Q NLD+ Q Sbjct: 63 VDAMGGLMAHAADKAGIQFRTLNSSKGPAVRATRAQSDRVLYRQAVRTALENQPNLDIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 E E++ ++ + + R +V+LT GTFL G IHIG GR GDS S + Sbjct: 123 QEATDILIEQDRVTGVSTKMGLTFRAKSVILTAGTFLAGKIHIGLENYEGGRAGDSASVN 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IEC 240 L + RLKTGTP R+D +TI +D KQ DE L FSFM + Q I C Sbjct: 183 LSHRLRDLGLRVDRLKTGTPPRIDARTINFDILAKQHGDEVLPVFSFMGSVDDHPQQIPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL Sbjct: 243 YITHTNEQTHEVIRNNLDRSPMYTGVIEGIGPRYCPSIEDKVMRFADRNSHQIYLEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 ++ VYPNGIST+LP ++Q + ++ GLE I++PGYAIEYDY +P++L PTLETK I Sbjct: 303 TSNEVYPNGISTSLPFDVQMGIVNSMKGLENARIVKPGYAIEYDYFDPRDLKPTLETKSI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 SGLF AGQINGTTGYEEAAAQGL+AGIN+ + D R SY GV++DDL + G Sbjct: 363 SGLFFAGQINGTTGYEEAAAQGLLAGINAGLYVQEKDAWYPRRDQSYTGVLVDDLCTLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYR+FTSRAEYR+ LR DNAD RLTPI +LG I E R RF + ++ R L+S Sbjct: 423 KEPYRVFTSRAEYRLLLREDNADIRLTPIAHELGLIDEARWARFNQKMENIEQERQRLRS 482 Query: 481 LVLTSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 + L ++ + + + + + L P+ + L S+ P +E++ Sbjct: 483 IWLHPRSEYLEEANKVLGSPLVREASGEDLLRRPEMTYDILTSLTPYKPAMEDKEAVEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I Y Y Q E ++ K E IP +FDYS + LSNE++ KL +P ++ QAS Sbjct: 543 EIAIKYQGYIEHQQEEIEKQKRHENTAIPANFDYSKVSGLSNEVRAKLEQHRPVSIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA++++L+ +KK + Sbjct: 603 RISGITPAAISIILVNLKKQGM 624 >gi|16767158|ref|NP_462773.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167994881|ref|ZP_02575971.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168234385|ref|ZP_02659443.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168245184|ref|ZP_02670116.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168263227|ref|ZP_02685200.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168464788|ref|ZP_02698680.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168823141|ref|ZP_02835141.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194445542|ref|YP_002043122.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194450875|ref|YP_002047905.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194470389|ref|ZP_03076373.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197250701|ref|YP_002148811.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197265255|ref|ZP_03165329.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|200388594|ref|ZP_03215206.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204928647|ref|ZP_03219846.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|238913127|ref|ZP_04656964.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|21263669|sp|Q8ZKW6|MNMG_SALTY RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|238690004|sp|B5EZ07|MNMG_SALA4 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|238690240|sp|B4TAY3|MNMG_SALHS RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|238693556|sp|B4SYE2|MNMG_SALNS RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|16422448|gb|AAL22732.1| associated with glucose-inhibited division [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|194404205|gb|ACF64427.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194409179|gb|ACF69398.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194456753|gb|EDX45592.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|195632101|gb|EDX50585.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197214404|gb|ACH51801.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197243510|gb|EDY26130.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|199605692|gb|EDZ04237.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204322080|gb|EDZ07278.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205327320|gb|EDZ14084.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205331678|gb|EDZ18442.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205336051|gb|EDZ22815.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205340555|gb|EDZ27319.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205348292|gb|EDZ34923.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|261249013|emb|CBG26871.1| glucose inhibited division protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267996162|gb|ACY91047.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301160406|emb|CBW19932.1| glucose inhibited division protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312915005|dbj|BAJ38979.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320088299|emb|CBY98060.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG Glucose-inhibited division protein A [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321222172|gb|EFX47245.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322617213|gb|EFY14118.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619099|gb|EFY15985.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625166|gb|EFY21994.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322630217|gb|EFY26988.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634358|gb|EFY31092.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635242|gb|EFY31957.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642881|gb|EFY39466.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645085|gb|EFY41615.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650434|gb|EFY46846.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653626|gb|EFY49953.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322661546|gb|EFY57769.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322661628|gb|EFY57847.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669790|gb|EFY65932.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671983|gb|EFY68102.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675006|gb|EFY71092.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683696|gb|EFY79709.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686083|gb|EFY82068.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323132236|gb|ADX19666.1| glucose-inhibited division protein A [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323192000|gb|EFZ77237.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323200494|gb|EFZ85572.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202723|gb|EFZ87760.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208300|gb|EFZ93241.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211735|gb|EFZ96568.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323218597|gb|EGA03304.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323219998|gb|EGA04468.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323224769|gb|EGA09034.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323232523|gb|EGA16625.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235298|gb|EGA19383.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323241086|gb|EGA25123.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323241365|gb|EGA25397.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248595|gb|EGA32525.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252106|gb|EGA35966.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258590|gb|EGA42253.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262378|gb|EGA45936.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323268215|gb|EGA51691.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270629|gb|EGA54074.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|332990723|gb|AEF09706.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 629 Score = 819 bits (2115), Expect = 0.0, Method: Composition-based stats. Identities = 293/624 (46%), Positives = 396/624 (63%), Gaps = 6/624 (0%) Query: 1 MINRS-YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLV 59 M + +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV Sbjct: 1 MFYQDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLV 60 Query: 60 REIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDV 119 +E+DAL GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Sbjct: 61 KEVDALGGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMI 120 Query: 120 IQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 Q V E + + V Q R VVLT GTFL G IHIG GR GD PS Sbjct: 121 FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPS 180 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-I 238 L + RLKTGTP R+D +TI + +Q D + FSFM + + Q + Sbjct: 181 IPLSRRLRELPLRVSRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQV 240 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPE Sbjct: 241 PCYITHTNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQIFLEPE 300 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL ++ +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K Sbjct: 301 GLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESK 360 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I GLF AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + Sbjct: 361 FIHGLFFAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTL 420 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYRMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R L Sbjct: 421 GTKEPYRMFTSRAEYRLMLREDNADLRLTEMGRELGLVDDERWARFNEKLENIERERQRL 480 Query: 479 KSLVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIE 534 KS +T S+ ++ + + + L P+ + L S+ A E Sbjct: 481 KSTWVTPSAESADEVNAHLTTPLSREASGEDLLRRPEMTYAQLTSLAAFAPALEDEQAAE 540 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ Q Sbjct: 541 QVEIQVKYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQ 600 Query: 595 ASKIEGMTPAALNLLLIYIKKNTV 618 AS+I G+TPAA+++LL+++KK + Sbjct: 601 ASRISGVTPAAISILLVWLKKQGM 624 >gi|269140865|ref|YP_003297566.1| glucose-inhibited cell division protein A (tRNA uridine 5-carboxymethylaminomethyl modification enzyme) [Edwardsiella tarda EIB202] gi|267986526|gb|ACY86355.1| glucose-inhibited cell division protein A (tRNA uridine 5-carboxymethylaminomethyl modification enzyme) [Edwardsiella tarda EIB202] gi|304560623|gb|ADM43287.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Edwardsiella tarda FL6-60] Length = 629 Score = 819 bits (2115), Expect = 0.0, Method: Composition-based stats. Identities = 286/618 (46%), Positives = 391/618 (63%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMASARMGRQTLLLTHNIDTLGHMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D GIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAQAIDKGGIQFRILNGSKGPAVRATRAQADRVLYRQAVRMALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLNGKIHIGLENYSGGRAGDPPSIGLARR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP RLD +TI + +Q D FSF+ D + RQ+ C IT Sbjct: 187 LRELPLRVNRLKTGTPPRLDARTIDFSVLAQQHGDNPAPVFSFLGDASQHPRQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL+++ Sbjct: 247 TNEHTHEVIRSNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLSSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q +R++ G++ I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMAIVRSMEGMQNTRIVRPGYAIEYDFFDPRDLKPTLESKYIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+ R + +D R ++Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAGRCAADVDGWAPRRDEAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLTPIG +LG + + R +F + ++ R L+ + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTPIGRELGLVDDVRWAQFNQKLENMERERQRLRETWVH 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 + + ++ + + + L P+ L S+ P + E+++I+ Sbjct: 487 PQGEQAAEVNALLKTPLSREASGEDLLRRPEMDYATLTSLSPFSPPLADRQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ + E +P D DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYQGYIARQQDEIEKQQRNENTRLPADLDYRQVNGLSNEVIAKLNDHKPSSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LL+++KK + Sbjct: 607 ITPAAISILLVWLKKQGM 624 >gi|319775496|ref|YP_004137984.1| glucose-inhibited cell-division protein [Haemophilus influenzae F3047] gi|329122463|ref|ZP_08251049.1| glucose inhibited division protein A [Haemophilus aegyptius ATCC 11116] gi|317450087|emb|CBY86301.1| glucose-inhibited cell-division protein [Haemophilus influenzae F3047] gi|327473217|gb|EGF18638.1| glucose inhibited division protein A [Haemophilus aegyptius ATCC 11116] Length = 629 Score = 818 bits (2114), Expect = 0.0, Method: Composition-based stats. Identities = 296/622 (47%), Positives = 393/622 (63%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +YDVIVIGGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 YTETYDVIVIGGGHAGTEAALAPARMGFKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DA+ GLM AD AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q Sbjct: 63 VDAMGGLMAHAADKAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 E E++ ++ + + R +V+LT GTFL G IHIG GR GD S + Sbjct: 123 QEATDILIEQDRVTGVSTKMGLTFRAKSVILTAGTFLAGKIHIGLENYEGGRAGDPASVN 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IEC 240 L + RLKTGTP R+D +TI +D KQ DE L FSFM + Q I C Sbjct: 183 LSHRLRDLGLRVDRLKTGTPPRIDARTINFDILTKQHGDEVLPMFSFMGSVDDHPQQIPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL Sbjct: 243 YITHTNEQTHEVIRNNLDRSPMYTGMIEGIGPRYCPSIEDKVMRFSDRNSHQIYLEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 ++ VYPNGIST+LP ++Q + ++ GLE I++PGYAIEYDY +P++L PTLETK I Sbjct: 303 TSNEVYPNGISTSLPFDVQMGIVNSMKGLENARIVKPGYAIEYDYFDPRDLKPTLETKSI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 SGLF AGQINGTTGYEEAAAQGL+AGIN+ + D R SY GV++DDL + G Sbjct: 363 SGLFFAGQINGTTGYEEAAAQGLLAGINAGLYVQEKDAWYPRRDQSYTGVLVDDLCTLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYR+FTSRAEYR+ LR DNAD RLTPI +LG I E R RF + ++ R L+S Sbjct: 423 KEPYRVFTSRAEYRLLLREDNADIRLTPIAHELGLIDEARWARFNQKMENIEQERQRLRS 482 Query: 481 LVLTSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 + L ++ + + + + + L P+ + L S+ P +E++ Sbjct: 483 IWLHPRSEYLEEANKVLGSPLVREASGEDLLRRPEMTYDILTSLTPYKPAMEDKEAVEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I Y Y Q E ++ K E IP +FDYS + LSNE++ KL +P ++ QAS Sbjct: 543 EIAIKYQGYIEHQQEEIEKQKRHENTAIPANFDYSKVSGLSNEVRAKLEQHRPVSIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA++++L+ +KK + Sbjct: 603 RISGITPAAISIILVNLKKQGM 624 >gi|152977682|ref|YP_001377199.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|189039328|sp|A7GVP6|MNMG_BACCN RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|152026434|gb|ABS24204.1| glucose inhibited division protein A [Bacillus cytotoxicus NVH 391-98] Length = 629 Score = 818 bits (2114), Expect = 0.0, Method: Composition-based stats. Identities = 279/619 (45%), Positives = 399/619 (64%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ LY+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFLYQHELKKTIEETPNLTLRQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEDGVCKGVITQSGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F+ R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFELVRFKTGTPPRVNSNTIDYSKTEIQPGDDQPRAFSFETTKFILDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I +N+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSEETHRLIDKNLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q + ++TIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQREMLKTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QG++AGIN+A +S + R+D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGIMAGINAACRSLGKKEVILGRSDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT IG ++G I E R +R+++ ++ ++ L+ +++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEIGHEIGLIPEERYERYSQKKEQIEQEKARLEGIIIK 486 Query: 485 S-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + S S +DG A + L P+ + +++ + P + + V E+++I+ Sbjct: 487 PRPEVQELIRSVGGSELKDGIR--ASDLLRRPEMTYEHIRLLAPSELEINDEVAEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + + +K E + IP D DY ++ +++E ++KL ++P ++ QAS+I Sbjct: 545 IKYEGYIEKSLQQVERMKKMESKKIPVDIDYDAISGIASEARQKLKEVRPLSVGQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 605 GVNPADISILLVYIEQGKI 623 >gi|56415742|ref|YP_152817.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197364670|ref|YP_002144307.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|81170575|sp|Q5PJX1|MNMG_SALPA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|238690766|sp|B5BIP5|MNMG_SALPK RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|56129999|gb|AAV79505.1| glucose inhibited division protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197096147|emb|CAR61743.1| glucose inhibited division protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 629 Score = 818 bits (2114), Expect = 0.0, Method: Composition-based stats. Identities = 293/624 (46%), Positives = 396/624 (63%), Gaps = 6/624 (0%) Query: 1 MINRS-YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLV 59 M + +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV Sbjct: 1 MFYQDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLV 60 Query: 60 REIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDV 119 +E+DAL GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Sbjct: 61 KEVDALGGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMI 120 Query: 120 IQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 Q V E + + V Q R VVLT GTFL G IHIG GR GD PS Sbjct: 121 FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPS 180 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-I 238 L + RLKTGTP R+D +TI + +Q D + FSFM + + Q + Sbjct: 181 IPLSRRLRELPLRVSRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQV 240 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPE Sbjct: 241 PCYITHTNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQIFLEPE 300 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL ++ +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K Sbjct: 301 GLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESK 360 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I GLF AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + Sbjct: 361 FIHGLFFAGQINGTTGYEEAAAQGLLAGLNAARLSADKERWAPARSQAYLGVLVDDLCTL 420 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYRMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R L Sbjct: 421 GTKEPYRMFTSRAEYRLMLREDNADLRLTEMGRELGLVDDERWARFNEKLENIERERQRL 480 Query: 479 KSLVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIE 534 KS +T S+ ++ + + + L P+ + L S+ A E Sbjct: 481 KSTWVTPSAESADEVNAHLTTPLSREASGEDLLRRPEMTYAQLTSLAAFAPALEDEQAAE 540 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ Q Sbjct: 541 QVEIQVKYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQ 600 Query: 595 ASKIEGMTPAALNLLLIYIKKNTV 618 AS+I G+TPAA+++LL+++KK + Sbjct: 601 ASRISGVTPAAISILLVWLKKQGM 624 >gi|198242041|ref|YP_002217822.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205354543|ref|YP_002228344.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207859097|ref|YP_002245748.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|238690338|sp|B5FN44|MNMG_SALDC RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|238690396|sp|B5QVE1|MNMG_SALEP RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|238690535|sp|B5RFV4|MNMG_SALG2 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|197936557|gb|ACH73890.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205274324|emb|CAR39348.1| glucose inhibited division protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206710900|emb|CAR35264.1| glucose inhibited division protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326625609|gb|EGE31954.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326629678|gb|EGE36021.1| glucose-inhibited division protein A [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 629 Score = 818 bits (2114), Expect = 0.0, Method: Composition-based stats. Identities = 293/624 (46%), Positives = 396/624 (63%), Gaps = 6/624 (0%) Query: 1 MINRS-YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLV 59 M + +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV Sbjct: 1 MFYQDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLV 60 Query: 60 REIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDV 119 +E+DAL GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Sbjct: 61 KEVDALGGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMI 120 Query: 120 IQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 Q V E + + V Q R VVLT GTFL G IHIG GR GD PS Sbjct: 121 FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPS 180 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-I 238 L + RLKTGTP R+D +TI + +Q D + FSFM + + Q + Sbjct: 181 IPLSRRLRELPLRVSRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQV 240 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPE Sbjct: 241 PCYITHTNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQIFLEPE 300 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL ++ +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K Sbjct: 301 GLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESK 360 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I GLF AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + Sbjct: 361 FIHGLFFAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTL 420 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYRMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R L Sbjct: 421 GTKEPYRMFTSRAEYRLMLREDNADLRLTEMGRELGLVDDERWARFNEKLESIERERQRL 480 Query: 479 KSLVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIE 534 KS +T S+ ++ + + + L P+ + L S+ A E Sbjct: 481 KSTWVTPSAESADEVNAHLTTPLSREASGEDLLRRPEMTYAQLTSLAAFAPALEDEQAAE 540 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ Q Sbjct: 541 QVEIQVKYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQ 600 Query: 595 ASKIEGMTPAALNLLLIYIKKNTV 618 AS+I G+TPAA+++LL+++KK + Sbjct: 601 ASRISGVTPAAISILLVWLKKQGM 624 >gi|229164434|ref|ZP_04292362.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus R309803] gi|228619039|gb|EEK75937.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus R309803] Length = 629 Score = 818 bits (2114), Expect = 0.0, Method: Composition-based stats. Identities = 284/619 (45%), Positives = 394/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEDGECKGVITQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVVLGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G ++G I + R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEVGREIGLIKDERYERFTNKKLQIEQEKERLSSIIIK 486 Query: 485 S-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + +T S +DG A + L P+ + +++ + P + S V E+++I+ Sbjct: 487 PRPEVQELIRNTGGSELKDGIR--ASDLLRRPEMTYEHIHLLVPSEVELSDEVTEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + + +K E + IP+D DY ++ +L++E ++KL ++P ++ QAS+I Sbjct: 545 IKYEGYIEKSLQQVERMKKMENKKIPEDIDYDAISSLASEARQKLKDVRPLSMGQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 605 GVNPADISILLVYIEQGKI 623 >gi|194431209|ref|ZP_03063502.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella dysenteriae 1012] gi|194420664|gb|EDX36740.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella dysenteriae 1012] gi|332084728|gb|EGI89914.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella dysenteriae 155-74] Length = 629 Score = 818 bits (2114), Expect = 0.0, Method: Composition-based stats. Identities = 292/618 (47%), Positives = 397/618 (64%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q +L + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPDLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + Q + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFRVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVICSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LL+++KK + Sbjct: 607 VTPAAISILLVWLKKQGM 624 >gi|332983462|ref|YP_004464903.1| glucose inhibited division protein A [Mahella australiensis 50-1 BON] gi|332701140|gb|AEE98081.1| glucose inhibited division protein A [Mahella australiensis 50-1 BON] Length = 624 Score = 818 bits (2114), Expect = 0.0, Method: Composition-based stats. Identities = 277/619 (44%), Positives = 386/619 (62%), Gaps = 4/619 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 +YDVIV+G GHAGCEAA +A++G T ++ +I M+CNP+IGG KGHLVREID Sbjct: 6 NTYDVIVVGAGHAGCEAALASARMGCKTLVVAINLDSIAMMACNPSIGGTSKGHLVREID 65 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G MG D IQ R+LN KGPAV R Q D++ Y+ M++ + Q+NLDV Q E Sbjct: 66 ALGGQMGITTDKTAIQVRMLNTSKGPAVYSLRAQIDKKAYQAVMKQTLEQQDNLDVKQAE 125 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E+ + +V ++ R V+LTTG +L G + IG++ +G G P+ L Sbjct: 126 VVRLLVEEGAVRGVVTHTGAIYRAKAVILTTGVYLNGRVIIGEVSYSSGPNGMFPATHLS 185 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + R KTGTPAR+ G++I + K Q DE IPFSFM DK+ +Q+ C +T Sbjct: 186 QDLLLLGIKLQRFKTGTPARVAGRSIDFSKMALQLGDEPPIPFSFMDDKLDAKQVPCHLT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II N+ S ++SGDIK GPRYCPSIEDK+VRF ++ HQIF+EPEGLNTD Sbjct: 246 YTNERTHEIIRRNLHRSPLFSGDIKGVGPRYCPSIEDKVVRFADKPSHQIFIEPEGLNTD 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G+S++LPE++Q + +R+I GLE V ++RP YAIEYD I+P +L +LE K I GL Sbjct: 306 EMYVQGMSSSLPEDVQIEMLRSIAGLEHVEVMRPAYAIEYDCIDPTQLKLSLEIKHIRGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQING++GYEEAAAQG++AGIN+AR + R+ +YIGV+IDDL +KG EP Sbjct: 366 FTAGQINGSSGYEEAAAQGIMAGINAARMVQGKPPVILDRSQAYIGVLIDDLVTKGTAEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRM TSRAEYR+ LR DNAD RLTPIG ++G G R +R+ + LKS ++ Sbjct: 426 YRMMTSRAEYRLLLRQDNADMRLTPIGYEIGLAGAERYERYLLKKDQVESELERLKSTII 485 Query: 484 TSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARK-FSSLVIERLQIE 539 + +S + T Y+ L P+ S L I D IE+++I Sbjct: 486 APDTEVNELLGKLSSQPIKTGVTLYDLLKRPEISYAALAPIDKDRPSGLLQQAIEQVEIN 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQM++ + K E +P D DY+++ L E ++KL ++P ++ QAS+I Sbjct: 546 VKYEGYIARQMMQIERFKKMEDHKLPDDIDYNAIKGLRIEARQKLDRIRPQSVGQASRIS 605 Query: 600 GMTPAALNLLLIYIKKNTV 618 G++PA +++LLIY+K++ + Sbjct: 606 GVSPADISVLLIYLKQHGL 624 >gi|43257|emb|CAA25773.1| unnamed protein product [Escherichia coli] gi|290590|gb|AAA62093.1| glucose inhibited division protein [Escherichia coli] Length = 628 Score = 818 bits (2114), Expect = 0.0, Method: Composition-based stats. Identities = 293/618 (47%), Positives = 397/618 (64%), Gaps = 6/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + Q + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLL-RPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 545 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 546 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 605 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LL+++KK + Sbjct: 606 VTPAAISILLVWLKKQGM 623 >gi|196041933|ref|ZP_03109220.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus NVH0597-99] gi|196027188|gb|EDX65808.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus NVH0597-99] Length = 629 Score = 818 bits (2113), Expect = 0.0, Method: Composition-based stats. Identities = 284/619 (45%), Positives = 392/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEDGECKGVITQSGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVILGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G ++G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEVGHEIGLITEERYERFTNKKLQIEQEKERLSSIIIK 486 Query: 485 S-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + + S +DG A + L P+ + +++ + P + S V E+++I+ Sbjct: 487 PRPEVQELIRNIGGSELKDGIR--ASDLLRRPEMTYEHIHLLVPSEVELSDEVKEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS+I Sbjct: 545 IKYEGYIEKSLQQVERMKKMENKKIPVDIDYDAISSLASEARQKLKDVRPLSMGQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 605 GVNPADISILLVYIEQGKI 623 >gi|324329434|gb|ADY24694.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus thuringiensis serovar finitimus YBT-020] Length = 629 Score = 818 bits (2113), Expect = 0.0, Method: Composition-based stats. Identities = 285/619 (46%), Positives = 392/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEDGECKGVITQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVILGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT IG ++G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEIGHEIGLIKEERYERFTNKKLQIEQEKERLSSIIIK 486 Query: 485 S-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + + S +DG A + L P+ + +++ + P + S V E+++I+ Sbjct: 487 PRPEVQELIRNIGGSELKDGIR--ASDLLRRPEMTYEHIRLLVPSEVELSDEVTEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS+I Sbjct: 545 IKYEGYIEKSLQQVERMKKMESKKIPVDIDYDAISSLASEARQKLKDVRPLSVGQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 605 GVNPADISILLVYIEQGKI 623 >gi|42784679|ref|NP_981926.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus ATCC 10987] gi|206975823|ref|ZP_03236734.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus H3081.97] gi|217962975|ref|YP_002341553.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus AH187] gi|222098960|ref|YP_002533018.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gida [Bacillus cereus Q1] gi|229142232|ref|ZP_04270756.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus BDRD-ST26] gi|229199693|ref|ZP_04326336.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus m1293] gi|81170515|sp|Q72WU4|MNMG_BACC1 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|42740611|gb|AAS44534.1| glucose-inhibited division protein A [Bacillus cereus ATCC 10987] gi|206745917|gb|EDZ57313.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus H3081.97] gi|217067770|gb|ACJ82020.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus AH187] gi|221243019|gb|ACM15729.1| glucose-inhibited division protein A [Bacillus cereus Q1] gi|228583788|gb|EEK41963.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus m1293] gi|228641250|gb|EEK97557.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus BDRD-ST26] Length = 629 Score = 818 bits (2113), Expect = 0.0, Method: Composition-based stats. Identities = 285/619 (46%), Positives = 392/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEDGECKGVITQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVILGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT IG ++G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEIGHEIGLIKEERYERFTNKKLQIEQEKERLSSIIIK 486 Query: 485 S-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + + S +DG A + L P+ + +++ + P + S V E+++I+ Sbjct: 487 PRPEVQELIRNIGGSELKDGIR--ASDLLRRPEMTYEHIHLLVPSEVELSDEVTEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS+I Sbjct: 545 IKYEGYIEKSLQQVERMKKMESKKIPVDIDYDAISSLASEARQKLKDVRPLSVGQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 605 GVNPADISILLVYIEQGKI 623 >gi|145629760|ref|ZP_01785555.1| glucose-inhibited division protein A [Haemophilus influenzae 22.1-21] gi|145638508|ref|ZP_01794117.1| glucose-inhibited division protein A [Haemophilus influenzae PittII] gi|144977999|gb|EDJ87783.1| glucose-inhibited division protein A [Haemophilus influenzae 22.1-21] gi|145272103|gb|EDK12011.1| glucose-inhibited division protein A [Haemophilus influenzae PittII] gi|309750012|gb|ADO79996.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Haemophilus influenzae R2866] Length = 629 Score = 818 bits (2112), Expect = 0.0, Method: Composition-based stats. Identities = 295/622 (47%), Positives = 392/622 (63%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +YDVIVIGGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 YTETYDVIVIGGGHAGTEAALAPARMGFKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DA+ GLM AD AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q Sbjct: 63 VDAMGGLMAHAADKAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 E +++ ++ + + R +VVLT GTFL G IHIG GR GD S + Sbjct: 123 QEATDILIKQDRVTGVSTKMGLTFRAKSVVLTAGTFLAGKIHIGLENYEGGRAGDPASVN 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IEC 240 L + RLKTGTP R+D +TI +D KQ D L FSFM + Q I C Sbjct: 183 LSHRLRDLGLRVDRLKTGTPPRIDARTINFDILAKQHGDAVLPVFSFMGSVDDHPQQIPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL Sbjct: 243 YITHTNEQTHEVIRNNLDRSPMYTGVIEGIGPRYCPSIEDKVMRFSDRNSHQIYLEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 ++ VYPNGIST+LP ++Q + ++ GLE I++PGYAIEYDY +P++L PTLETK I Sbjct: 303 TSNEVYPNGISTSLPFDVQMGIVNSMKGLENARIVKPGYAIEYDYFDPRDLKPTLETKSI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 SGLF AGQINGTTGYEEAAAQGL+AGIN+ + D R SY GV++DDL + G Sbjct: 363 SGLFFAGQINGTTGYEEAAAQGLLAGINAGLYVQEKDAWYPRRDQSYTGVLVDDLCTLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYR+FTSRAEYR+ LR DNAD RLTPI +LG I E R RF + ++ R L+S Sbjct: 423 KEPYRVFTSRAEYRLLLREDNADIRLTPIAHELGLIDEARWARFNQKMENIEQERQRLRS 482 Query: 481 LVLTSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 + L ++ + + + + + L P+ + L S+ P +E++ Sbjct: 483 IWLHPRSEYLEEANKVLGSPLVREASGEDLLRRPEMTYDILTSLTPYKPAMEDKEAVEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I Y Y Q E ++ K E IP +FDYS + LSNE++ KL +P ++ QAS Sbjct: 543 EIAIKYQGYIEHQQEEIEKQKRHENTAIPANFDYSKVSGLSNEVRAKLEQHRPVSIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA++++L+ +KK + Sbjct: 603 RISGITPAAISIILVNLKKQGM 624 >gi|161616997|ref|YP_001590962.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|189039355|sp|A9MXB8|MNMG_SALPB RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|161366361|gb|ABX70129.1| hypothetical protein SPAB_04818 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 629 Score = 818 bits (2112), Expect = 0.0, Method: Composition-based stats. Identities = 293/624 (46%), Positives = 396/624 (63%), Gaps = 6/624 (0%) Query: 1 MINRS-YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLV 59 M + +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV Sbjct: 1 MFYQDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLV 60 Query: 60 REIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDV 119 +E+DAL GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Sbjct: 61 KEVDALGGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMI 120 Query: 120 IQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 Q V E + + V Q R VVLT GTFL G IHIG GR GD PS Sbjct: 121 FQQAVEDLIVENDSVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPS 180 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-I 238 L + RLKTGTP R+D +TI + +Q D + FSFM + + Q + Sbjct: 181 IPLSRRLRELPLRVSRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQV 240 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPE Sbjct: 241 PCYITHTNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQIFLEPE 300 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL ++ +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K Sbjct: 301 GLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESK 360 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I GLF AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + Sbjct: 361 FIHGLFFAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTL 420 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYRMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R L Sbjct: 421 GTKEPYRMFTSRAEYRLMLREDNADLRLTEMGRELGLVDDERWARFNEKLENIERERQRL 480 Query: 479 KSLVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIE 534 KS +T S+ ++ + + + L P+ + L S+ A E Sbjct: 481 KSTWVTPSAESADEVNAHLTTPLSREASGEDLLRRPEMTYAQLTSLAAFAPALEDEQAAE 540 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ Q Sbjct: 541 QVEIQVKYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQ 600 Query: 595 ASKIEGMTPAALNLLLIYIKKNTV 618 AS+I G+TPAA+++LL+++KK + Sbjct: 601 ASRISGVTPAAISILLVWLKKQGM 624 >gi|16762452|ref|NP_458069.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29143940|ref|NP_807282.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213052661|ref|ZP_03345539.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213427461|ref|ZP_03360211.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213649867|ref|ZP_03379920.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|21263667|sp|Q8Z2Q7|MNMG_SALTI RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|25300013|pir||AE0953 glucose inhibited division protein [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16504757|emb|CAD03121.1| glucose inhibited division protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29139576|gb|AAO71142.1| glucose inhibited division protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 629 Score = 818 bits (2112), Expect = 0.0, Method: Composition-based stats. Identities = 291/624 (46%), Positives = 395/624 (63%), Gaps = 6/624 (0%) Query: 1 MINRS-YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLV 59 M + +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNP IGG+GKGHLV Sbjct: 1 MFYQDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPTIGGIGKGHLV 60 Query: 60 REIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDV 119 +E+DAL GLM + D AGIQF++LN KGPAVR R QADR LYR A++ + +Q NL + Sbjct: 61 KEVDALGGLMAKAIDQAGIQFKILNASKGPAVRATRAQADRVLYRQAVRIALENQPNLMI 120 Query: 120 IQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 Q V E + + V Q R VVLT GTFL G IHIG GR GD PS Sbjct: 121 FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPS 180 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-I 238 L + RLKTGTP R+D +TI + +Q D + FSFM + + Q + Sbjct: 181 IPLSRRLRELPLRVSRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNAFQHPQQV 240 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPE Sbjct: 241 PCYITHTNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQIFLEPE 300 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL ++ +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K Sbjct: 301 GLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESK 360 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I GLF AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + Sbjct: 361 FIHGLFFAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTL 420 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYRMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R L Sbjct: 421 GTKEPYRMFTSRAEYRLMLREDNADLRLTEMGRELGLVDDERWARFNEKLENIERERQRL 480 Query: 479 KSLVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIE 534 KS +T S+ ++ + + + L P+ + L S+ A E Sbjct: 481 KSTWVTPSAESADEVNAHLTTPLSREASGEDLLRRPEMTYAQLTSLAAFAPALEDEQAAE 540 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ Q Sbjct: 541 QVEIQVKYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQ 600 Query: 595 ASKIEGMTPAALNLLLIYIKKNTV 618 AS+I G+TPAA+++LL+++KK + Sbjct: 601 ASRISGVTPAAISILLVWLKKQGM 624 >gi|229159043|ref|ZP_04287099.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus ATCC 4342] gi|228624462|gb|EEK81233.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus ATCC 4342] Length = 629 Score = 818 bits (2112), Expect = 0.0, Method: Composition-based stats. Identities = 284/619 (45%), Positives = 392/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEDGECKGVITQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVILGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G ++G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEVGREIGLITEERYERFTNKKLQIEQEKERLSSIIIK 486 Query: 485 S-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + + S +DG A + L P+ + +++ + P + S V E+++I+ Sbjct: 487 PRPEVQELIRNIGGSELKDGIR--ASDLLRRPEMTYEHIHLLVPSEVELSDEVKEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS+I Sbjct: 545 IKYEGYIEKSLQQVERMKKMENKKIPVDIDYDAISSLASEARQKLKDVRPLSVGQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 605 GVNPADISILLVYIEQGKI 623 >gi|300118815|ref|ZP_07056535.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus SJ1] gi|298723783|gb|EFI64505.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus SJ1] Length = 629 Score = 817 bits (2111), Expect = 0.0, Method: Composition-based stats. Identities = 285/619 (46%), Positives = 392/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEDGECKGVITQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVILGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT IG ++G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEIGHEIGLITEDRYERFTNKKLQIEQEKERLSSIIIK 486 Query: 485 S-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + + S +DG A + L P+ + +++ + P + S V E+++I+ Sbjct: 487 PRPEVQELIRNIGGSELKDGIR--ASDLLRRPEMTYEHIHLLVPSEVELSDEVKEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS+I Sbjct: 545 IKYEGYIEKSLQQVERMKKMENKKIPVDIDYDAISSLASEARQKLKDVRPLSMGQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 605 GVNPADISILLVYIEQGKI 623 >gi|52145291|ref|YP_086748.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus E33L] gi|196045512|ref|ZP_03112743.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus 03BB108] gi|229094594|ref|ZP_04225661.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus Rock3-42] gi|81824093|sp|Q630B9|MNMG_BACCZ RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|51978760|gb|AAU20310.1| glucose-inhibited division protein A [Bacillus cereus E33L] gi|196023719|gb|EDX62395.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus 03BB108] gi|228688841|gb|EEL42672.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus Rock3-42] Length = 629 Score = 817 bits (2111), Expect = 0.0, Method: Composition-based stats. Identities = 285/619 (46%), Positives = 392/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEDGECKGVITQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVILGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT IG ++G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEIGREIGLITEERYERFTNKKLQIEQEKERLSSIIIK 486 Query: 485 S-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + + S +DG A + L P+ + +++ + P + S V E+++I+ Sbjct: 487 PRPEVQELIRNIGGSELKDGIR--ASDLLRRPEMTYEHIHLLVPSEVELSDEVKEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS+I Sbjct: 545 IKYEGYIEKSLQQVERMKKMENKKIPVDIDYDAISSLASEARQKLKDVRPLSMGQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 605 GVNPADISILLVYIEQGKI 623 >gi|47568682|ref|ZP_00239379.1| glucose inhibited division protein A [Bacillus cereus G9241] gi|228988712|ref|ZP_04148797.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|47554670|gb|EAL13024.1| glucose inhibited division protein A [Bacillus cereus G9241] gi|228771024|gb|EEM19505.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 629 Score = 817 bits (2111), Expect = 0.0, Method: Composition-based stats. Identities = 284/619 (45%), Positives = 392/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEDGECKGVITQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVILGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G ++G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEVGREIGLITEERYERFTNKKLQIEQEKERLSSIIIK 486 Query: 485 S-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + + S +DG A + L P+ + +++ + P + S V E+++I+ Sbjct: 487 PRPEVQELIRNIGGSELKDGIR--ASDLLRRPEMTYEHIHLLVPSEVELSDEVTEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS+I Sbjct: 545 IKYEGYIEKSLQQVERMKKMENKKIPVDIDYDAISSLASEARQKLKDVRPLSVGQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 605 GVNPADISILLVYIEQGKI 623 >gi|260583255|ref|ZP_05851032.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Haemophilus influenzae NT127] gi|260093708|gb|EEW77619.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Haemophilus influenzae NT127] Length = 629 Score = 817 bits (2111), Expect = 0.0, Method: Composition-based stats. Identities = 297/622 (47%), Positives = 393/622 (63%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +YDVIVIGGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 YTETYDVIVIGGGHAGTEAALAPARMGFKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DA+ GLM AD AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q Sbjct: 63 VDAMGGLMAHAADKAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 E E++ ++ + + R +VVLT GTFL G IHIG GR GD S + Sbjct: 123 QEATDILIEQDRVTGVSTKMGLTFRAKSVVLTAGTFLAGKIHIGLENYEGGRAGDPASVN 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IEC 240 L + RLKTGTP R+D +TI +D KQ D L FSFM + Q I C Sbjct: 183 LSHRLRDLGLRVDRLKTGTPPRIDARTINFDILAKQHGDAVLPVFSFMGSVDDHPQQIPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL Sbjct: 243 YITHTNEQTHEVIRNNLDRSPMYTGVIEGIGPRYCPSIEDKVMRFSDRNSHQIYLEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 ++ VYPNGIST+LP ++Q + ++ GLEK I++PGYAIEYDY +P++L PTLETK I Sbjct: 303 TSNEVYPNGISTSLPFDVQMGIVNSMKGLEKARIVKPGYAIEYDYFDPRDLKPTLETKSI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 SGLF AGQINGTTGYEEAAAQGL+AGIN+ + D R SY GV++DDL + G Sbjct: 363 SGLFFAGQINGTTGYEEAAAQGLLAGINAGLYVQEKDAWYPRRDQSYTGVLVDDLCTLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYR+FTSRAEYR+ LR DNAD RLTPI +LG I E R RF + ++ R L+S Sbjct: 423 KEPYRVFTSRAEYRLLLREDNADIRLTPIAHELGLIDEARWARFNQKMENIEQERQRLRS 482 Query: 481 LVLTSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 + L ++ + + + + + L P+ + L S+ P +E++ Sbjct: 483 IWLHPRSEYLEEANKVLGSPLVREASGEDLLRRPEMTYDILTSLTPYKSAIEDREAVEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I Y Y Q E ++ K E IP +FDYS + LSNE++ KL +P ++ QAS Sbjct: 543 EIAIKYQGYIEHQQEEIEKQKRHENTAIPANFDYSKVSGLSNEVRAKLEQHRPVSIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA++++L+ +KK + Sbjct: 603 RISGITPAAISIILVNLKKQGM 624 >gi|228924228|ref|ZP_04087499.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228835446|gb|EEM80816.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 629 Score = 817 bits (2110), Expect = 0.0, Method: Composition-based stats. Identities = 285/619 (46%), Positives = 395/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E+ + +V Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEEGVCKGVVTQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKEEVVLGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G ++G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEVGREIGLIKEERYERFTNKKLQIEQEKERLSSIIIK 486 Query: 485 S-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + + S +DG A + L P+ + +++ + P + S V E+++I+ Sbjct: 487 PRPEVQELIRNIGGSELKDGIR--ASDLLRRPEMTYEHIHLLVPSEVELSDEVKEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS+I Sbjct: 545 IKYEGYIEKSLQQVERMKKMESKKIPVDIDYDAISSLASEARQKLKDVRPLSMGQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 605 GVNPADISILLVYIEQGKI 623 >gi|225867464|ref|YP_002752842.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus 03BB102] gi|225788645|gb|ACO28862.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus 03BB102] Length = 629 Score = 817 bits (2110), Expect = 0.0, Method: Composition-based stats. Identities = 286/619 (46%), Positives = 393/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ Q + TVV+TTGTFLRG I +G+LK +G PS +L Sbjct: 127 ERLIVEDGECKGVITQAGAEYTAKTVVITTGTFLRGEIIMGELKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRSFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVILGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT IG ++G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEIGHEIGLIKEDRYERFTNKKLQIEQEKERLSSIIIK 486 Query: 485 S-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + S S +DG A + L P+ + +++ + P + S V E+++I+ Sbjct: 487 PRPEVQELIRSIGGSELKDGIR--ASDLLRRPEMTYEHIHLLVPSEVELSDEVTEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS+I Sbjct: 545 IKYEGYIEKSLQQVERMKKMENKKIPVDIDYDAISSLASEARQKLKDVRPLSMGQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 605 GVNPADISILLVYIEQGKI 623 >gi|289826268|ref|ZP_06545380.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 627 Score = 817 bits (2110), Expect = 0.0, Method: Composition-based stats. Identities = 291/623 (46%), Positives = 394/623 (63%), Gaps = 6/623 (0%) Query: 1 MINRS-YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLV 59 M + +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNP IGG+GKGHLV Sbjct: 1 MFYQDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPTIGGIGKGHLV 60 Query: 60 REIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDV 119 +E+DAL GLM + D AGIQF++LN KGPAVR R QADR LYR A++ + +Q NL + Sbjct: 61 KEVDALGGLMAKAIDQAGIQFKILNASKGPAVRATRAQADRVLYRQAVRIALENQPNLMI 120 Query: 120 IQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 Q V E + + V Q R VVLT GTFL G IHIG GR GD PS Sbjct: 121 FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPS 180 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-I 238 L + RLKTGTP R+D +TI + +Q D + FSFM + + Q + Sbjct: 181 IPLSRRLRELPLRVSRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNAFQHPQQV 240 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPE Sbjct: 241 PCYITHTNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQIFLEPE 300 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL ++ +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K Sbjct: 301 GLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESK 360 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I GLF AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + Sbjct: 361 FIHGLFFAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTL 420 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYRMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R L Sbjct: 421 GTKEPYRMFTSRAEYRLMLREDNADLRLTEMGRELGLVDDERWARFNEKLENIERERQRL 480 Query: 479 KSLVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIE 534 KS +T S+ ++ + + + L P+ + L S+ A E Sbjct: 481 KSTWVTPSAESADEVNAHLTTPLSREASGEDLLRRPEMTYAQLTSLAAFAPALEDEQAAE 540 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ Q Sbjct: 541 QVEIQVKYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQ 600 Query: 595 ASKIEGMTPAALNLLLIYIKKNT 617 AS+I G+TPAA+++LL+++KK Sbjct: 601 ASRISGVTPAAISILLVWLKKTR 623 >gi|30265501|ref|NP_847878.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. Ames] gi|47531069|ref|YP_022418.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. 'Ames Ancestor'] gi|49188320|ref|YP_031573.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. Sterne] gi|49481136|ref|YP_039473.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus thuringiensis serovar konkukian str. 97-27] gi|65317464|ref|ZP_00390423.1| COG0445: NAD/FAD-utilizing enzyme apparently involved in cell division [Bacillus anthracis str. A2012] gi|118480510|ref|YP_897661.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus thuringiensis str. Al Hakam] gi|165873038|ref|ZP_02217659.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. A0488] gi|167635097|ref|ZP_02393414.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. A0442] gi|167641741|ref|ZP_02399984.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. A0193] gi|170689473|ref|ZP_02880663.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. A0465] gi|170707574|ref|ZP_02898027.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. A0389] gi|177655265|ref|ZP_02936819.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. A0174] gi|227818252|ref|YP_002818261.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. CDC 684] gi|228918095|ref|ZP_04081623.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228930489|ref|ZP_04093489.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228936763|ref|ZP_04099554.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229124986|ref|ZP_04254160.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus 95/8201] gi|229187712|ref|ZP_04314848.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus BGSC 6E1] gi|229600914|ref|YP_002869692.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. A0248] gi|254687076|ref|ZP_05150934.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. CNEVA-9066] gi|254724141|ref|ZP_05185926.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. A1055] gi|254735158|ref|ZP_05192868.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. Western North America USA6153] gi|254742133|ref|ZP_05199820.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. Kruger B] gi|254755957|ref|ZP_05207989.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. Vollum] gi|254761363|ref|ZP_05213385.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. Australia 94] gi|301056957|ref|YP_003795168.1| glucose-inhibited division protein A [Bacillus anthracis CI] gi|38372308|sp|Q81JH3|MNMG_BACAN RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|81170518|sp|Q6HAF3|MNMG_BACHK RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|166222907|sp|A0RLR1|MNMG_BACAH RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|30260179|gb|AAP29364.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. Ames] gi|47506217|gb|AAT34893.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. 'Ames Ancestor'] gi|49182247|gb|AAT57623.1| glucose-inhibited division protein A [Bacillus anthracis str. Sterne] gi|49332692|gb|AAT63338.1| glucose-inhibited division protein A [Bacillus thuringiensis serovar konkukian str. 97-27] gi|118419735|gb|ABK88154.1| glucose-inhibited division protein A [Bacillus thuringiensis str. Al Hakam] gi|164711250|gb|EDR16806.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. A0488] gi|167510295|gb|EDR85698.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. A0193] gi|167529571|gb|EDR92321.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. A0442] gi|170127570|gb|EDS96444.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. A0389] gi|170666575|gb|EDT17348.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. A0465] gi|172080192|gb|EDT65284.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. A0174] gi|227002905|gb|ACP12648.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. CDC 684] gi|228595780|gb|EEK53464.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus BGSC 6E1] gi|228658487|gb|EEL14153.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus 95/8201] gi|228822972|gb|EEM68813.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228829208|gb|EEM74845.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228841575|gb|EEM86691.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229265322|gb|ACQ46959.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis str. A0248] gi|300379126|gb|ADK08030.1| glucose-inhibited division protein A [Bacillus cereus biovar anthracis str. CI] Length = 629 Score = 817 bits (2110), Expect = 0.0, Method: Composition-based stats. Identities = 284/619 (45%), Positives = 392/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEDGECKGVITQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVILGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G ++G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEVGHEIGLITEERYERFTNKKLQIEQEKERLSSIIIK 486 Query: 485 S-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + + S +DG A + L P+ + +++ + P + S V E+++I+ Sbjct: 487 PRPEVQELIRNIGGSELKDGIR--ASDLLRRPEMTYEHIHLLVPSEVELSDEVKEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS+I Sbjct: 545 IKYEGYIEKSLQQVERMKKMENKKIPVDIDYDAISSLASEARQKLKDVRPLSMGQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 605 GVNPADISILLVYIEQGKI 623 >gi|91795108|ref|YP_564759.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shewanella denitrificans OS217] gi|123165631|sp|Q12HP0|MNMG_SHEDO RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|91717110|gb|ABE57036.1| glucose inhibited division protein A [Shewanella denitrificans OS217] Length = 629 Score = 817 bits (2110), Expect = 0.0, Method: Composition-based stats. Identities = 290/622 (46%), Positives = 388/622 (62%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +DVIV+GGGHAG EAA +A++G+ T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 FHERFDVIVVGGGHAGTEAALASARMGSKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M D AGIQFR LN KGPAVR R QADR LYR +Q+ + SQ NL + Q Sbjct: 63 IDALGGAMAIATDFAGIQFRTLNSSKGPAVRATRAQADRALYRQKIQQILQSQPNLRIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E N + +V Q TVVLTTGTFL G IHIG GR GD P+ + Sbjct: 123 QAVDDLVVENNQVVGVVTQMGLAFESPTVVLTTGTFLSGKIHIGMQNYSGGRAGDPPAIA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIEC 240 L N + GRLKTGTP R+D +I + + +Q D L SF+ + + RQI C Sbjct: 183 LANRLRELPIRVGRLKTGTPPRIDANSIDFSQMTEQKGDTPLPVMSFVGNVDQHPRQISC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH II + S +YSG I+ GPRYCPSIEDKI RF ++ HQIF+EPEGL Sbjct: 243 HITHTNEKTHDIIRGGLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKTSHQIFIEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 +T+ +YPNGIST+LP ++Q +R+I G+E IIRPGYAIEYDY +P++L +LETK I Sbjct: 303 STNEIYPNGISTSLPFDVQLNLVRSIKGMENAEIIRPGYAIEYDYFDPRDLKNSLETKTI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 +GLF AGQINGTTGYEEA AQGL+AG+N++ + + C R +Y+GV++DDL++ G Sbjct: 363 NGLFFAGQINGTTGYEEAGAQGLLAGMNASLQVQGKETWCPRRDQAYLGVLVDDLSTLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT G +LG + + R +F + + L+ Sbjct: 423 KEPYRMFTSRAEYRLLLREDNADLRLTEKGRELGLVNDDRWAKFTEKRESIELELQRLRG 482 Query: 481 LVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 + + ++ + + + + L P+ Q L S+ E++ Sbjct: 483 QWIHPNSPLLGVLNPELNTPISREASFEDLLRRPEMDYQKLMSLEGFGPGLEDPSAAEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 QI+ Y+ Y RQ E + E L+P D DY +P LSNE+ KL+ KP + QAS Sbjct: 543 QIQVKYSGYIQRQQDEIDKAIRHENSLLPLDLDYQEVPGLSNEVIAKLNNHKPDTIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA+++LL+++KK + Sbjct: 603 RISGITPAAISILLVHLKKRGL 624 >gi|94501613|ref|ZP_01308130.1| glucose-inhibited division protein A [Oceanobacter sp. RED65] gi|94426296|gb|EAT11287.1| glucose-inhibited division protein A [Oceanobacter sp. RED65] Length = 628 Score = 817 bits (2110), Expect = 0.0, Method: Composition-based stats. Identities = 291/618 (47%), Positives = 396/618 (64%), Gaps = 5/618 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIV+GGGHAG EA AA++G T L+TH T+G MSCNPAIGG+GK HLV+EID Sbjct: 5 KRYDVIVVGGGHAGTEACLAAARMGCKTLLLTHSIETVGVMSCNPAIGGIGKSHLVKEID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 A DG M R D GIQFR LN +KGPAVR R QADR LY+ A++ + +Q NL+ Q Sbjct: 65 AFDGAMARATDRGGIQFRTLNSRKGPAVRATRAQADRALYKAAIREIVENQPNLEFFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 E + + +V Q I +VVLTTGTFL GVIHIG GR GD PSN+L Sbjct: 125 CDDLIVEGDTVKGVVTQAGIKIYADSVVLTTGTFLGGVIHIGMDNYQGGRAGDPPSNNLA 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGI 242 + F+ GRLKTGTPAR+D +++ + ++Q D+ SFM ++ + Q I+C I Sbjct: 185 KRLRELPFNVGRLKTGTPARIDARSVDFSVMQRQPGDDVTPIMSFMGNREEHPQQIDCFI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II + S +YSG I+ GPRYCPSIEDK++RF ++N HQIF+EPEGL+T Sbjct: 245 THTNEQTHDIIRAGLDRSPMYSGVIEGIGPRYCPSIEDKVMRFADKNSHQIFVEPEGLST 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNGIST+LP ++Q + I ++ G E +I RPGYAIEYD+ NP++L +LETK + G Sbjct: 305 HELYPNGISTSLPFDVQVEMIHSMKGFENAHITRPGYAIEYDFFNPQDLKHSLETKFMQG 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEA AQGL+AG N+A +S + D R ++YIGV++DDL + G E Sbjct: 365 LFFAGQINGTTGYEEAGAQGLLAGTNAALRSMEKDAWYPRRDEAYIGVLVDDLITMGTNE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT G +LG +G+ R F + + LKS Sbjct: 425 PYRMFTSRAEYRLILREDNADLRLTEKGRELGLVGDERWAAFCEKKEAIEQEEQRLKSTW 484 Query: 483 LTSKNLS---STSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + S + + + L P+ + ++ ++ + V E++QI Sbjct: 485 ILPNTEEGDVVNGFSKTPITREYSLMDLLKRPEITYSDIANLKGEPVA-DPQVSEQVQIM 543 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + Y Y RQ+ E ++++ E L+P D D+S + LSNE+ +KLS ++P L AS+I+ Sbjct: 544 AKYEGYINRQLEEIEQMRRYEDTLLPADLDFSKVGGLSNEIVQKLSEIQPETLGTASRIQ 603 Query: 600 GMTPAALNLLLIYIKKNT 617 G+TPAA++ LLIY+KK+ Sbjct: 604 GVTPAAISQLLIYLKKHH 621 >gi|152972650|ref|YP_001337796.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|262040354|ref|ZP_06013600.1| glucose-inhibited division protein A [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330005171|ref|ZP_08305133.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Klebsiella sp. MS 92-3] gi|205831537|sp|A6TG45|MNMG_KLEP7 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|150957499|gb|ABR79529.1| glucose-inhibited division protein A [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|259042295|gb|EEW43320.1| glucose-inhibited division protein A [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328536377|gb|EGF62736.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Klebsiella sp. MS 92-3] Length = 629 Score = 817 bits (2110), Expect = 0.0, Method: Composition-based stats. Identities = 291/624 (46%), Positives = 395/624 (63%), Gaps = 6/624 (0%) Query: 1 MINRS-YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLV 59 M + +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV Sbjct: 1 MFYQDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLV 60 Query: 60 REIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDV 119 +E+DAL GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Sbjct: 61 KEVDALGGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMI 120 Query: 120 IQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 Q V E + + V Q R VVLT GTFL G IHIG GR GD PS Sbjct: 121 FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPS 180 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQI 238 L + RLKTGTP R+D +TI + +Q D + FSFM + RQ+ Sbjct: 181 IPLSRRLRELPLRVSRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGSADQHPRQV 240 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPE Sbjct: 241 PCYITHTNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQIFLEPE 300 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL ++ +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K Sbjct: 301 GLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENARIVRPGYAIEYDFFDPRDLKPTLESK 360 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I GLF AGQINGTTGYEEAAAQGL+AG+N+AR S + + R +Y+GV++DDL + Sbjct: 361 FIQGLFFAGQINGTTGYEEAAAQGLLAGLNAARFSAEKEGWAPRRDQAYLGVLVDDLCTL 420 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYRMFTSRAEYR+ LR DNAD RLT G +LG + + R R+ + ++ R L Sbjct: 421 GTKEPYRMFTSRAEYRLMLREDNADLRLTEQGRELGLVDDERWARYNEKLESIERERQRL 480 Query: 479 KSLVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIE 534 KS + + S+ ++ + + + L P+ + + L + P E Sbjct: 481 KSTWVNPQAESANEVNAHLTAPLSREASGEDLLRRPEMTYEQLVQLSPFTPGLEDRQAAE 540 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E ++ + E L+P DY + LSNE+ KL+ KP ++ Q Sbjct: 541 QVEIQVKYEGYIARQQDEIEKQQRNENTLLPATLDYRQVTGLSNEVIAKLNDHKPSSIGQ 600 Query: 595 ASKIEGMTPAALNLLLIYIKKNTV 618 AS+I G+TPAA+++LL+++KK + Sbjct: 601 ASRISGITPAAISILLVWLKKQGM 624 >gi|228949205|ref|ZP_04111473.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228810488|gb|EEM56841.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 629 Score = 817 bits (2110), Expect = 0.0, Method: Composition-based stats. Identities = 284/619 (45%), Positives = 392/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEDGECKGVITQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVILGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G ++G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEVGHEIGLITEERYERFTNKKLQIEKEKERLSSIIIK 486 Query: 485 S-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + + S +DG A + L P+ + +++ + P + S V E+++I+ Sbjct: 487 PRPEVQELIRNIGGSELKDGIR--ASDLLRRPEMTYEHIHLLVPSEVELSDEVKEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS+I Sbjct: 545 IKYEGYIEKSLQQVERMKKMENKKIPVDIDYDAISSLASEARQKLKDVRPLSMGQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 605 GVNPADISILLVYIEQGKI 623 >gi|238921734|ref|YP_002935249.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Edwardsiella ictaluri 93-146] gi|238871303|gb|ACR71014.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA, putative [Edwardsiella ictaluri 93-146] Length = 629 Score = 817 bits (2110), Expect = 0.0, Method: Composition-based stats. Identities = 286/618 (46%), Positives = 391/618 (63%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMASARMGRQTLLLTHNIDTLGHMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D GIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAQAIDKGGIQFRILNGSKGPAVRATRAQADRILYRQAVRMALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLNGKIHIGLENYSGGRAGDPPSIGLARR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP RLD +TI + +Q D FSF+ + + RQ+ C IT Sbjct: 187 LRELPLRVNRLKTGTPPRLDARTIDFSVLAQQHGDNPAPVFSFLGEASQHPRQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL+++ Sbjct: 247 TNEHTHEVIRGNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLSSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q +R++ G++ I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMAIVRSMAGMQNTRIVRPGYAIEYDFFDPRDLKPTLESKYIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+ R + L+ R ++Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAGRCAADLEGWMPRRDEAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLTPIG +LG + + R +F + ++ R L+ + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTPIGRELGLVDDVRWAQFNQKLENMERERQRLRETWVH 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 ++ + ++ + + + L P+ L S+ P E+++I+ Sbjct: 487 PQSERAAEVNVLLKTPLSREASGEDLLRRPEMDYATLTSLSPFYPPLADRQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P D DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYQGYIARQQDEIEKQLRNENTLLPADLDYRQVNGLSNEVIAKLNDHKPSSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LL+++KK + Sbjct: 607 ITPAAISILLVWLKKQGM 624 >gi|325576882|ref|ZP_08147497.1| glucose inhibited division protein A [Haemophilus parainfluenzae ATCC 33392] gi|325161088|gb|EGC73206.1| glucose inhibited division protein A [Haemophilus parainfluenzae ATCC 33392] Length = 629 Score = 816 bits (2109), Expect = 0.0, Method: Composition-based stats. Identities = 298/622 (47%), Positives = 394/622 (63%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +YDVIV+GGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 YTENYDVIVVGGGHAGTEAALAPARMGLKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DA+ GLM AD AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q Sbjct: 63 VDAMGGLMAHAADKAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRIALENQPNLDIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 EV E++ + + + R +VVLT GTFL G IHIG GR GD S + Sbjct: 123 QEVTDILVEQDCVCGVETKMGLKFRAKSVVLTAGTFLAGKIHIGLEHYEGGRAGDPASVT 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IEC 240 L + + RLKTGTP R+D +TI +D KQ DE L FSFM + Q I C Sbjct: 183 LSHRLRDLNLRVDRLKTGTPPRIDARTINFDILAKQHGDEVLPVFSFMGSVDDHPQQIPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL Sbjct: 243 YITHTNEQTHEVIRNNLDRSPMYTGVIEGIGPRYCPSIEDKVMRFADRNSHQIYLEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 ++ VYPNGIST+LP ++Q + ++ GLEK II+PGYAIEYDY +P++L PTLETK I Sbjct: 303 TSNEVYPNGISTSLPFDVQMGIVNSMKGLEKARIIKPGYAIEYDYFDPRDLKPTLETKSI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 SGLF AGQINGTTGYEEAAAQGL+AGIN+ + + R SY GV++DDL + G Sbjct: 363 SGLFFAGQINGTTGYEEAAAQGLLAGINAGLYVQEKEAWYPRRDQSYTGVLVDDLCTLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYR+FTSRAEYR+ LR DNAD RLTPI +LG I E R RF + ++ R L+S Sbjct: 423 KEPYRVFTSRAEYRLLLREDNADIRLTPIAYELGLIDEARWARFNQKMENIEQERQRLRS 482 Query: 481 LVLTSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 + L ++ + + + + L P+ + L S+ P +E++ Sbjct: 483 IWLHPRSEYLEEANKVLGSPLVREANGEDLLRRPEMTYDILTSLTPYKPAMEDREAVEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I Y Y Q E ++ K E IP +FDYS + LSNE++ KL +P ++ QAS Sbjct: 543 EIAIKYQGYIEHQQEEIEKQKRHENTAIPANFDYSKVSGLSNEVRAKLEQHRPVSIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA++++L+ +KK + Sbjct: 603 RISGITPAAISIILVNLKKQGM 624 >gi|229176159|ref|ZP_04303651.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus MM3] gi|228607318|gb|EEK64648.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus MM3] Length = 629 Score = 816 bits (2109), Expect = 0.0, Method: Composition-based stats. Identities = 286/619 (46%), Positives = 392/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTYIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E +V Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEDGECKGVVTQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVILGRADAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT IG ++G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEIGREIGLIKEERYERFTNKKLKIEQEKERLSSIIIK 486 Query: 485 S-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + S S +DG A + L P+ + +++ + P + S + E+++I+ Sbjct: 487 PRPEVQELIRSIGGSELKDGIR--ASDLLRRPEMTYEHIHLLVPSEVELSDEITEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS+I Sbjct: 545 IKYEGYIEKSLQQVERMKKMENKKIPVDIDYDAISSLASEARQKLKDVRPLSMGQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 605 GVNPADVSILLVYIEQGKI 623 >gi|146313753|ref|YP_001178827.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterobacter sp. 638] gi|166989737|sp|A4WGE6|MNMG_ENT38 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|145320629|gb|ABP62776.1| glucose inhibited division protein A [Enterobacter sp. 638] Length = 629 Score = 816 bits (2109), Expect = 0.0, Method: Composition-based stats. Identities = 293/624 (46%), Positives = 397/624 (63%), Gaps = 6/624 (0%) Query: 1 MINRS-YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLV 59 M + +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV Sbjct: 1 MFYQDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLV 60 Query: 60 REIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDV 119 +E+DAL GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Sbjct: 61 KEVDALGGLMAKAIDHAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMI 120 Query: 120 IQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 Q V E + + V Q R VVLT GTFL G IHIG GR GD PS Sbjct: 121 FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPS 180 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-I 238 SL + RLKTGTP R+D +TI + +Q D + FSFM + + Q + Sbjct: 181 ISLSRRLRELPLRVNRLKTGTPPRIDARTIDFSVLAQQHGDTPIPVFSFMGNAAQHPQQV 240 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPE Sbjct: 241 PCYITHTNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQIFLEPE 300 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL ++ +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K Sbjct: 301 GLTSNEIYPNGISTSLPFDVQIQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESK 360 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I GLF AGQINGTTGYEEAAAQGL+AG+N+AR S + + R +Y+GV++DDL++ Sbjct: 361 FIQGLFFAGQINGTTGYEEAAAQGLLAGLNAARFSAEKEGWAPRRDQAYLGVLVDDLSTM 420 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYRMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R L Sbjct: 421 GTKEPYRMFTSRAEYRLMLREDNADLRLTEMGRELGLVDDERWARFNEKLERIETERQRL 480 Query: 479 KSLVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIE 534 KS + S ++ + + + L P + + L + P A E Sbjct: 481 KSTWVNPLADSVAEVNAHLAAPLSREASGEDLLRRPGMTYEQLVQMTPFAPGLDDAEAAE 540 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E ++ + E L+P+ DY + LSNE+ KL+ KP ++ Q Sbjct: 541 QVEIQIKYEGYIARQQDEIEKQQRNENTLLPEMLDYRQVTGLSNEVIAKLNDHKPVSIGQ 600 Query: 595 ASKIEGMTPAALNLLLIYIKKNTV 618 AS+I G+TPAA+++LL+++KK + Sbjct: 601 ASRISGVTPAAISILLVWLKKQGM 624 >gi|315635268|ref|ZP_07890545.1| glucose inhibited division protein A [Aggregatibacter segnis ATCC 33393] gi|315476014|gb|EFU66769.1| glucose inhibited division protein A [Aggregatibacter segnis ATCC 33393] Length = 629 Score = 816 bits (2109), Expect = 0.0, Method: Composition-based stats. Identities = 295/622 (47%), Positives = 394/622 (63%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +YDVIVIGGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLVRE Sbjct: 3 YTETYDVIVIGGGHAGTEAALAPARMGLKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVRE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDA+ GLM AD AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q Sbjct: 63 IDAMGGLMATAADQAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRIALENQPNLDIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 EV+ E++ + +V + +V+LT GTFL G IHIG GR GD S + Sbjct: 123 QEVSDILVEQDRATGVVTKMGLKFHAKSVILTAGTFLAGKIHIGLENYEGGRAGDPASVT 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIEC 240 L + RLKTGTP R+D +TI + +Q D L FSFM + RQI C Sbjct: 183 LSHRLRDLGLRVDRLKTGTPPRIDARTIDFSVLAEQHGDAELPIFSFMGSVDQHPRQIPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL Sbjct: 243 FITHTNEKTHEVIRNNLDRSPMYTGVIEGIGPRYCPSIEDKVMRFADRNSHQIYLEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T+ +YPNGIST+LP ++Q + ++ GLE II+PGYAIEYDY +P++L PTLETK I Sbjct: 303 TTNEIYPNGISTSLPFDVQMGIVNSMKGLENARIIKPGYAIEYDYFDPRDLKPTLETKSI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQINGTTGYEEAA+QGL+AGIN+ + + R +Y+GV++DDL + G Sbjct: 363 QGLFFAGQINGTTGYEEAASQGLLAGINAGLYVQEKEVWFPRRDQAYMGVLVDDLCTLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYR+FTSRAEYR+ LR DNAD RLTPI +LG I E R RF + ++ R L+S Sbjct: 423 KEPYRVFTSRAEYRLLLREDNADIRLTPIAHELGLIDEARWARFNQKMENIEQERQRLRS 482 Query: 481 LVLTSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 + L ++ + + + + + L P+ + Q L ++ P IE++ Sbjct: 483 IWLHPRSEYLEEANQVLGSPLVREASGEDLLRRPEINYQILTALTPFQPPMADKEAIEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I Y Y Q E ++ K E IP +FDYS + LSNE++ KL +P ++ QAS Sbjct: 543 EISIKYQGYIEHQQDEIEKQKRHENTAIPPNFDYSKVAGLSNEVRIKLEQHRPVSIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA++++L+ +KK + Sbjct: 603 RISGITPAAISIILVNLKKQGM 624 >gi|196036098|ref|ZP_03103498.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus W] gi|218906675|ref|YP_002454509.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus AH820] gi|195991265|gb|EDX55233.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus W] gi|218539382|gb|ACK91780.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus AH820] Length = 629 Score = 816 bits (2109), Expect = 0.0, Method: Composition-based stats. Identities = 284/619 (45%), Positives = 393/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEDGECKGVITQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVILGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G ++G I E R +RF + ++ L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEVGHEIGLITEERYERFTNKKLQIEQEKARLSSIIIK 486 Query: 485 S-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + + S +DG A + L P+ + +++ + P + S V E+++I+ Sbjct: 487 PRPEVQELIRNIGGSELKDGIR--ASDLLRRPEMTYEHIHLLVPSEVELSDEVKEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS+I Sbjct: 545 IKYEGYIEKSLQQVERMKKMENKKIPVDIDYDAISSLASEARQKLKDVRPLSMGQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 605 GVNPADISILLVYIEQGKI 623 >gi|228911323|ref|ZP_04075127.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis IBL 200] gi|228848341|gb|EEM93191.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis IBL 200] Length = 629 Score = 816 bits (2109), Expect = 0.0, Method: Composition-based stats. Identities = 286/619 (46%), Positives = 393/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E I +V Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEDGICKGVVTQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRSFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVVLGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G ++G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEVGREIGLIKEERYERFTNKKLQIEQEKERLSSIIIK 486 Query: 485 S-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + + S +DG A + L P+ + +++ + P + S V E+++I+ Sbjct: 487 PRPEVQELIRNIGGSELKDGIR--ASDLLRRPEMTYEHIHLLVPSEVELSDEVTEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS+I Sbjct: 545 IKYEGYIEKSLQQVERMKKMESKKIPVDIDYDAISSLASEARQKLKDVRPLSMGQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 605 GVNPADISILLVYIEQGKI 623 >gi|228955733|ref|ZP_04117728.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229072948|ref|ZP_04206144.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus F65185] gi|229082697|ref|ZP_04215144.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus Rock4-2] gi|229181729|ref|ZP_04309052.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus 172560W] gi|229193734|ref|ZP_04320675.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus ATCC 10876] gi|228589759|gb|EEK47637.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus ATCC 10876] gi|228601762|gb|EEK59260.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus 172560W] gi|228700609|gb|EEL53148.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus Rock4-2] gi|228710194|gb|EEL62172.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus F65185] gi|228803961|gb|EEM50585.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 629 Score = 816 bits (2109), Expect = 0.0, Method: Composition-based stats. Identities = 285/619 (46%), Positives = 395/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E+ + +V Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEEGVCKGVVTQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKEEVVLGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G K+G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEVGRKIGLIKEERYERFTNKKLQIEQEKERLSSIIIK 486 Query: 485 S-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + + S +DG A + L P+ + +++ + P + S V E+++I+ Sbjct: 487 PRPEVQELIRNIGGSELKDGIR--ASDLLRRPEMTYEHIHLLVPSEVELSDEVKEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + + +K E + IP D DY ++ ++++E ++KL ++P ++ QAS+I Sbjct: 545 IKYEGYIEKSLQQVERMKKMENKKIPVDIDYDAISSIASEARQKLKDVRPLSMGQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 605 GVNPADISILLVYIEQGKI 623 >gi|238897248|ref|YP_002921996.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Klebsiella pneumoniae NTUH-K2044] gi|238549578|dbj|BAH65929.1| glucose-inhibited division protein A [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 629 Score = 816 bits (2109), Expect = 0.0, Method: Composition-based stats. Identities = 291/624 (46%), Positives = 395/624 (63%), Gaps = 6/624 (0%) Query: 1 MINRS-YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLV 59 M + +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV Sbjct: 1 MFYQDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLV 60 Query: 60 REIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDV 119 +E+DAL GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Sbjct: 61 KEVDALGGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMI 120 Query: 120 IQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 Q V E + + V Q R VVLT GTFL G IHIG GR GD PS Sbjct: 121 FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPS 180 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQI 238 L + RLKTGTP R+D +TI + +Q D + FSFM + RQ+ Sbjct: 181 IPLSRRLRELPLRVSRLKTGTPPRIDSRTIDFSVLAQQHGDNPMPVFSFMGSADQHPRQV 240 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPE Sbjct: 241 PCYITHTNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQIFLEPE 300 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL ++ +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K Sbjct: 301 GLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENARIVRPGYAIEYDFFDPRDLKPTLESK 360 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I GLF AGQINGTTGYEEAAAQGL+AG+N+AR S + + R +Y+GV++DDL + Sbjct: 361 FIQGLFFAGQINGTTGYEEAAAQGLLAGLNAARFSAEKEGWAPRRDQAYLGVLVDDLCTL 420 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYRMFTSRAEYR+ LR DNAD RLT G +LG + + R R+ + ++ R L Sbjct: 421 GTKEPYRMFTSRAEYRLMLREDNADLRLTEQGRELGLVDDERWARYNEKLESIERERQRL 480 Query: 479 KSLVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIE 534 KS + + S+ ++ + + + L P+ + + L + P E Sbjct: 481 KSTWVNPQAESANEVNAHLTAPLSREASGEDLLRRPEMTYEQLVQLSPFTPGLEDRQAAE 540 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E ++ + E L+P DY + LSNE+ KL+ KP ++ Q Sbjct: 541 QVEIQVKYEGYIARQQDEIEKQQRNENTLLPATLDYRQVTGLSNEVIAKLNDHKPSSIGQ 600 Query: 595 ASKIEGMTPAALNLLLIYIKKNTV 618 AS+I G+TPAA+++LL+++KK + Sbjct: 601 ASRISGITPAAISILLVWLKKQGM 624 >gi|26986749|ref|NP_742174.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas putida KT2440] gi|38257497|sp|Q88RW8|MNMG_PSEPK RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|24981339|gb|AAN65638.1|AE016190_4 glucose-inhibited division protein A [Pseudomonas putida KT2440] Length = 631 Score = 816 bits (2109), Expect = 0.0, Method: Composition-based stats. Identities = 289/617 (46%), Positives = 384/617 (62%), Gaps = 5/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 8 FDVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGHMSCNPAIGGIGKSHLVKEIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D +GIQFRVLN +KGPAVR R QADR +Y+ ++ + +Q NL + Q Sbjct: 68 GGAMALATDKSGIQFRVLNNRKGPAVRATRAQADRAIYKAVVREILENQPNLWIFQQSCD 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q +VVLTTGTFL G+IHIG GR GD PS +L + Sbjct: 128 DLIVEQDQVKGVVTQMGLRFFAESVVLTTGTFLGGLIHIGLQNHSGGRAGDPPSIALAHR 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SFM + ++ RQ+ C IT Sbjct: 188 MRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFMGNAEMHPRQVSCWITH 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGLNT Sbjct: 248 TNARTHEIIASNLDRSPMYSGVIEGVGPRYCPSIEDKIHRFADKESHQVFIEPEGLNTHE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q + +R+I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 308 LYPNGISTSLPFDVQLELVRSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 368 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG I ++R F LKS + Sbjct: 428 RMFTSRAEYRLILREDNADLRLTEKGRELGLIDDQRWAAFCAKRDGIEREEQRLKSTWVR 487 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +I K + L+ P+ L V E+++I + Sbjct: 488 PNTEQGQAIVDKFGTPLSHEYSLLNLLARPEIDYAGLIEATGG-EAIDPQVAEQVEIRTK 546 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E ++ E +P D DY+++ LS E++ KLS +P L QAS+I G+ Sbjct: 547 YAGYIDRQQDEIARLRASEDTRLPVDIDYTTISGLSKEIQGKLSQTRPQTLGQASRIPGV 606 Query: 602 TPAALNLLLIYIKKNTV 618 TPAA++LLLI++KK Sbjct: 607 TPAAISLLLIHLKKRGA 623 >gi|319897901|ref|YP_004136098.1| glucose-inhibited cell-division protein [Haemophilus influenzae F3031] gi|317433407|emb|CBY81788.1| glucose-inhibited cell-division protein [Haemophilus influenzae F3031] Length = 629 Score = 816 bits (2108), Expect = 0.0, Method: Composition-based stats. Identities = 296/622 (47%), Positives = 394/622 (63%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +YDVIVIGGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 YTETYDVIVIGGGHAGTEAALAPARMGFKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DA+ GLM AD AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q Sbjct: 63 VDAMGGLMAHAADKAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 E E++ ++ + + + R +VVLT GTFL G IHIG GR GD S + Sbjct: 123 QEATDILIEQDRVTGVSTKMGLIFRAKSVVLTAGTFLAGKIHIGLENYEGGRAGDPASVN 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IEC 240 L + RLKTGTP R+D +TI +D KQ D L FSFM + Q I C Sbjct: 183 LSHRLRDLGLRVDRLKTGTPPRIDARTINFDILAKQHGDAVLPVFSFMGSVDDHPQQIPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL Sbjct: 243 YITHTNEQTHEVIRNNLDRSPMYTGVIEGIGPRYCPSIEDKVMRFSDRNSHQIYLEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 ++ VYPNGIST+LP ++Q + ++ GLEK I++PGYAIEYDY +P++L PTLETK I Sbjct: 303 TSNEVYPNGISTSLPFDVQMGIVNSMKGLEKARIVKPGYAIEYDYFDPRDLKPTLETKSI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 SGLF AGQINGTTGYEEAAAQGL+AGIN+ + D R SY GV++DDL + G Sbjct: 363 SGLFFAGQINGTTGYEEAAAQGLLAGINAGLYVQEKDAWYPRRDQSYTGVLVDDLCTLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYR+FTSRAEYR+ LR DNAD RLTPI +LG I E R RF + ++ R L++ Sbjct: 423 KEPYRVFTSRAEYRLLLREDNADIRLTPIAHELGLIDEARWARFNQKMENIEQERQRLRN 482 Query: 481 LVLTSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 + L ++ + + + + + L P+ + L S+ P +E++ Sbjct: 483 IWLHPRSEYLEEANKVLGSPLVREASGEDLLRRPEMTYDILTSLTPYKPAMEDREAVEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I Y Y Q E ++ K E IP +FDYS + LSNE++ KL +P ++ QAS Sbjct: 543 EIAIKYQGYIEHQQEEIEKQKRHENTAIPANFDYSKVSGLSNEVRAKLEQHRPVSIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA++++L+ +KK + Sbjct: 603 RISGITPAAISIILVNLKKQGM 624 >gi|313496413|gb|ADR57779.1| MnmG [Pseudomonas putida BIRD-1] Length = 630 Score = 816 bits (2108), Expect = 0.0, Method: Composition-based stats. Identities = 289/617 (46%), Positives = 384/617 (62%), Gaps = 5/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FDVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGHMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D +GIQFRVLN +KGPAVR R QADR +Y+ ++ + +Q NL + Q Sbjct: 67 GGAMALATDKSGIQFRVLNNRKGPAVRATRAQADRAIYKAVVREILENQPNLWIFQQSCD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q +VVLTTGTFL G+IHIG GR GD PS +L + Sbjct: 127 DLIVEQDQVKGVVTQMGLRFFAESVVLTTGTFLGGLIHIGLQNHSGGRAGDPPSIALAHR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SFM + ++ RQ+ C IT Sbjct: 187 MRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFMGNAEMHPRQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGLNT Sbjct: 247 TNARTHEIIASNLDRSPMYSGVIEGVGPRYCPSIEDKIHRFADKESHQVFIEPEGLNTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q + +R+I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLELVRSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG I ++R F LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLIDDQRWAAFCAKRDGIEREEQRLKSTWVR 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +I K + L+ P+ L V E+++I + Sbjct: 487 PNTEQGQAIVDKFGTPLSHEYSLLNLLARPEIDYAGLIEATGG-EAIDPQVAEQVEIRTK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E ++ E +P D DY+++ LS E++ KLS +P L QAS+I G+ Sbjct: 546 YAGYIDRQQDEIARLRASEDTRLPVDIDYTTISGLSKEIQGKLSQTRPETLGQASRIPGV 605 Query: 602 TPAALNLLLIYIKKNTV 618 TPAA++LLLI++KK Sbjct: 606 TPAAISLLLIHLKKRGA 622 >gi|261341602|ref|ZP_05969460.1| hypothetical protein ENTCAN_08064 [Enterobacter cancerogenus ATCC 35316] gi|288315953|gb|EFC54891.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enterobacter cancerogenus ATCC 35316] Length = 629 Score = 816 bits (2108), Expect = 0.0, Method: Composition-based stats. Identities = 289/624 (46%), Positives = 400/624 (64%), Gaps = 6/624 (0%) Query: 1 MINRS-YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLV 59 M + +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV Sbjct: 1 MFYQDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLV 60 Query: 60 REIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDV 119 +E+DAL GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Sbjct: 61 KEVDALGGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMI 120 Query: 120 IQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 Q V E + + V Q R VVLT GTFL G IHIG GR GD PS Sbjct: 121 FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPS 180 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-I 238 L + RLKTGTP R+D +TI + +Q D + FSFM + + Q + Sbjct: 181 IPLSRRLRELPLRVSRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNAAQHPQQV 240 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPE Sbjct: 241 PCYITHTNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQIFLEPE 300 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL ++ +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K Sbjct: 301 GLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESK 360 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I GLF AGQINGTTGYEEAAAQGL+AG+N+AR S + + R+ +Y+GV++DDL + Sbjct: 361 FIQGLFFAGQINGTTGYEEAAAQGLLAGLNAARFSAEKEGWAPGRSQAYLGVLVDDLCTL 420 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYRMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R L Sbjct: 421 GTKEPYRMFTSRAEYRLMLREDNADLRLTEMGRELGLVDDERWARFNEKLERIERERQRL 480 Query: 479 KSLVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIE 534 K+ + + ++ ++ + + + L P+ + ++L ++ A E Sbjct: 481 KTTWVNPQAETAAEVNTHLTAPLSREASGEDLLRRPEMTYESLVNLTAFAPGLDDAEAAE 540 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E ++ + E L+P+ DY + LSNE+ KL+ KP ++ Q Sbjct: 541 QVEIQVKYEGYIARQQDEIEKQQRNENTLLPEMLDYRQVTGLSNEVIAKLNDHKPVSIGQ 600 Query: 595 ASKIEGMTPAALNLLLIYIKKNTV 618 AS+I G+TPAA+++LL+++KK + Sbjct: 601 ASRISGVTPAAISILLVWLKKQGM 624 >gi|206970241|ref|ZP_03231194.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus AH1134] gi|206734818|gb|EDZ51987.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus AH1134] Length = 629 Score = 816 bits (2108), Expect = 0.0, Method: Composition-based stats. Identities = 285/619 (46%), Positives = 395/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLSLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E+ + +V Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEEGVCKGVVTQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKEEVVLGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G K+G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEVGRKIGLIKEERYERFTNKKLQIEQEKERLSSIIIK 486 Query: 485 S-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + + S +DG A + L P+ + +++ + P + S V E+++I+ Sbjct: 487 PRPEVQELIRNIGGSELKDGIR--ASDLLRRPEMTYEHIHLLVPSEVELSDEVKEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + + +K E + IP D DY ++ ++++E ++KL ++P ++ QAS+I Sbjct: 545 IKYEGYIEKSLQQVERMKKMENKKIPVDIDYDAISSIASEARQKLKDVRPLSMGQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 605 GVNPADISILLVYIEQGKI 623 >gi|62182357|ref|YP_218774.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|75479634|sp|Q57HW9|MNMG_SALCH RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|62129990|gb|AAX67693.1| associate with glucose-inhibited division [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322716851|gb|EFZ08422.1| glucose-inhibited division protein A [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 629 Score = 816 bits (2108), Expect = 0.0, Method: Composition-based stats. Identities = 292/624 (46%), Positives = 395/624 (63%), Gaps = 6/624 (0%) Query: 1 MINRS-YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLV 59 M + +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV Sbjct: 1 MFYQDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLV 60 Query: 60 REIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDV 119 +E+DAL GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Sbjct: 61 KEVDALGGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMI 120 Query: 120 IQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 Q V E + + V Q R VVLT GTFL G IHIG GR GD PS Sbjct: 121 FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPS 180 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-I 238 L + RLKTGTP R+D +TI + +Q D + FSFM + + Q + Sbjct: 181 IPLSRRLRELPLRVSRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQV 240 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPE Sbjct: 241 PCYITHTNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQIFLEPE 300 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL ++ +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K Sbjct: 301 GLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESK 360 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I GLF AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + Sbjct: 361 FIHGLFFAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTL 420 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYRMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R L Sbjct: 421 GTKEPYRMFTSRAEYRLMLREDNADLRLTEMGRELGLVDDERWARFNEKLENIERERQRL 480 Query: 479 KSLVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIE 534 KS +T S+ ++ + + + L P+ + L S+ A E Sbjct: 481 KSTWVTPSAESADEVNAHLTTPLSREASGEDLLRRPEMTYAQLTSLAAFAPALEDEQAAE 540 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ Q Sbjct: 541 QVEIQVKYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQ 600 Query: 595 ASKIEGMTPAALNLLLIYIKKNTV 618 AS+I G+TP A+++LL+++KK + Sbjct: 601 ASRISGVTPVAISILLVWLKKQGM 624 >gi|75761489|ref|ZP_00741453.1| Putative tRNA (5-carboxymethylaminomethyl-2-thiouridylate) synthase subunit GidA [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218900624|ref|YP_002449035.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus G9842] gi|228905427|ref|ZP_04069382.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis IBL 4222] gi|228968635|ref|ZP_04129618.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis serovar sotto str. T04001] gi|74491028|gb|EAO54280.1| Putative tRNA (5-carboxymethylaminomethyl-2-thiouridylate) synthase subunit GidA [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218545582|gb|ACK97976.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus G9842] gi|228791064|gb|EEM38682.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis serovar sotto str. T04001] gi|228854247|gb|EEM98950.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis IBL 4222] Length = 629 Score = 816 bits (2108), Expect = 0.0, Method: Composition-based stats. Identities = 285/619 (46%), Positives = 393/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + +V Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEDGMCKGVVTQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRSFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVVLGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G ++G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEVGREIGLIKEERYERFTNKKLQIEQEKERLSSIIIK 486 Query: 485 S-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + + S +DG A + L P+ + +++ + P + S V E+++I+ Sbjct: 487 PRPEVQELIRNIGGSELKDGIR--ASDLLRRPEMTYEHIHLLVPSEVELSDEVTEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS+I Sbjct: 545 IKYEGYIEKSLQQVERMKKMESKKIPVDIDYDAISSLASEARQKLKDVRPLSMGQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 605 GVNPADISILLVYIEQGKI 623 >gi|146297755|ref|YP_001181526.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Caldicellulosiruptor saccharolyticus DSM 8903] gi|166222920|sp|A4XN50|MNMG_CALS8 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|145411331|gb|ABP68335.1| glucose inhibited division protein A [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 626 Score = 816 bits (2108), Expect = 0.0, Method: Composition-based stats. Identities = 275/616 (44%), Positives = 384/616 (62%), Gaps = 3/616 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YD++V+G GHAGCEAA A+LG T + +IG+M CNP+IGG GKGHLVREIDA Sbjct: 7 EYDIVVVGAGHAGCEAALACARLGLKTIVFAINLDSIGNMPCNPSIGGTGKGHLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ ADA IQ R+LN KGPAV R Q DR Y+L M+R + SQ NLD+ QGEV Sbjct: 67 LGGEMGKAADATAIQVRILNRAKGPAVYSLRAQCDRARYKLYMKRVLESQPNLDIRQGEV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ + + ++ R VVL TGTFL G I IG+ G G P+ L Sbjct: 127 CDILVEDGKVTGVKLTTGAIFRAKAVVLATGTFLGGRIIIGETVYDGGPDGMHPAKYLTE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S K + R KTGTPAR+ +++ + K + Q DE + PFSF + + Q+ C +T Sbjct: 187 SLKKLGIEMMRFKTGTPARVHRRSLDFSKMQIQLGDEVITPFSFEHETLEIEQVPCYLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETHRII EN+ + +++G I+ GPRYCPSIEDK+VRF ++ HQ+F+EP G +T+ Sbjct: 247 TTEETHRIIRENLHRAPLFTGLIQGVGPRYCPSIEDKVVRFADKPRHQVFIEPMGRDTEE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+S++LPE++Q + R++ GLE V I+RP YAIEYD INP +L TL+ KKI GLF Sbjct: 307 MYVQGMSSSLPEDVQIKMYRSVIGLENVQIMRPAYAIEYDCINPLQLEATLQFKKIKGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAAAQG++AGIN+A + + R+ +YIGV+IDDL +KG EPY Sbjct: 367 SAGQINGTSGYEEAAAQGIIAGINAAMYVKGKEMLVLDRSQAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT IG ++G I + R ++F K + LK V+ Sbjct: 427 RIMTSRAEYRLILRQDNADLRLTEIGYRIGLISQERYEKFLKKKKMIEDEIERLKKTVIA 486 Query: 485 SKNLSSTSISFKQDGKTRT---AYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 + + + T E L P+ S + L I P V E ++IE Sbjct: 487 PSDKVNKFLIEHGSSPISTGVKLSELLKRPELSYEALREIDPQRPDLPRSVKEEVEIEIK 546 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y +Q+ + ++ K E + IP+ DY+ + LS E K+KLS ++P ++ QAS+I G+ Sbjct: 547 YEGYIKKQLQQIEQFKKLENKKIPEWVDYNQISGLSTEAKQKLSQIRPASIGQASRISGV 606 Query: 602 TPAALNLLLIYIKKNT 617 +PA +++LLI++++ Sbjct: 607 SPADISVLLIWLEQAK 622 >gi|296105465|ref|YP_003615611.1| glucose-inhibited division protein A [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059924|gb|ADF64662.1| glucose-inhibited division protein A [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 629 Score = 816 bits (2108), Expect = 0.0, Method: Composition-based stats. Identities = 290/624 (46%), Positives = 401/624 (64%), Gaps = 6/624 (0%) Query: 1 MINRS-YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLV 59 M + +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV Sbjct: 1 MFYQDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLV 60 Query: 60 REIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDV 119 +E+DAL GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Sbjct: 61 KEVDALGGLMAKAIDHAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMI 120 Query: 120 IQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 Q V E + + V Q R VVLT GTFL G IHIG GR GD PS Sbjct: 121 FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPS 180 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-I 238 L + RLKTGTP R+D +TI + +Q D + FSFM + + Q + Sbjct: 181 IPLSRRLRELPLRVSRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNAAQHPQQV 240 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPE Sbjct: 241 PCYITHTNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQIFLEPE 300 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL ++ +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K Sbjct: 301 GLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESK 360 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I GLF AGQINGTTGYEEAAAQGL+AG+N+AR S + + +R+ +Y+GV++DDL + Sbjct: 361 FIHGLFFAGQINGTTGYEEAAAQGLLAGLNAARFSAEKEGWAPARSQAYLGVLVDDLCTL 420 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYRMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R L Sbjct: 421 GTKEPYRMFTSRAEYRLMLREDNADLRLTEMGRELGLVDDERWARFNEKLERIEQERQRL 480 Query: 479 KSLVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIE 534 K+ + + ++ ++ + + + L P+ + +NL + A + E Sbjct: 481 KTTWVNPQAETAAEVNAHLTAPLSREASGEDLLRRPEVTYENLVKLTAFAPGLEDAEAAE 540 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E ++ + E L+P+ DY + LSNE+ KL+ KP ++ Q Sbjct: 541 QVEIQVKYEGYIARQQDEIEKQQRNENTLLPEMLDYRQVTGLSNEVIAKLNDHKPVSIGQ 600 Query: 595 ASKIEGMTPAALNLLLIYIKKNTV 618 AS+I G+TPAA+++LL+++KK + Sbjct: 601 ASRISGVTPAAISILLVWLKKQGM 624 >gi|229845662|ref|ZP_04465786.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Haemophilus influenzae 6P18H1] gi|229811400|gb|EEP47105.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Haemophilus influenzae 6P18H1] Length = 629 Score = 816 bits (2107), Expect = 0.0, Method: Composition-based stats. Identities = 299/622 (48%), Positives = 396/622 (63%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +YDVIVIGGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 YTETYDVIVIGGGHAGTEAALAPARMGLKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DA+ GLM AD AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q Sbjct: 63 VDAMGGLMAHAADKAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 E E++ ++ + + + R +VVLT GTFL G IHIG GR GD S + Sbjct: 123 QEATDILIEQDRVTGVSTKMGLIFRAKSVVLTAGTFLAGKIHIGLENYEGGRAGDPASVN 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IEC 240 L RLKTGTP R+D +TI +D KQ D L FSFM + Q I C Sbjct: 183 LSYRLRDLGLRVDRLKTGTPPRIDARTINFDILAKQHGDAVLPVFSFMGSVFDHPQQIPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL Sbjct: 243 YITHTNEQTHEVIRNNLDRSPMYTGVIEGVGPRYCPSIEDKVMRFADRNSHQIYLEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 ++ VYPNGIST+LP ++Q + ++ GLEK II+PGYAIEYDY +P++L PTLETK I Sbjct: 303 TSNEVYPNGISTSLPFDVQMGIVNSMKGLEKARIIKPGYAIEYDYFDPRDLKPTLETKAI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 SGLF AGQINGTTGYEEAAAQGL+AGIN+ + + R SY GV++DDL + G Sbjct: 363 SGLFFAGQINGTTGYEEAAAQGLLAGINAGLYVQEKEAWYPRRDQSYTGVLVDDLCTLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYR+FTSRAEYR+ LR DNAD RLTPI +LG I E R RF + +++ R L+S Sbjct: 423 KEPYRVFTSRAEYRLLLREDNADIRLTPIAHELGLIDEARWARFNQKMEKIEQERQRLRS 482 Query: 481 LVLTSKN--LSSTS-ISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 + L ++ L T+ + + + + L P+ + L S+ P +E++ Sbjct: 483 IWLHPRSEYLEETNKVLGSPLVREASGEDLLRRPEMTYDILTSLTPYKPAMEDREAVEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I Y Y Q E ++ K E IP +FDYS + LSNE++ KL +P ++ QAS Sbjct: 543 EIAIKYQGYIEHQQEEIEKQKRHENTAIPANFDYSKVSGLSNEVRAKLEQHRPVSIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA++++L+ +KK + Sbjct: 603 RISGITPAAISIILVNLKKQGM 624 >gi|311281694|ref|YP_003943925.1| glucose inhibited division protein A [Enterobacter cloacae SCF1] gi|308750889|gb|ADO50641.1| glucose inhibited division protein A [Enterobacter cloacae SCF1] Length = 629 Score = 816 bits (2107), Expect = 0.0, Method: Composition-based stats. Identities = 296/624 (47%), Positives = 399/624 (63%), Gaps = 6/624 (0%) Query: 1 MINRS-YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLV 59 M + +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV Sbjct: 1 MFYQDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLV 60 Query: 60 REIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDV 119 +E+DAL GLM D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Sbjct: 61 KEVDALGGLMATAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMI 120 Query: 120 IQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 Q V E + + V Q R VVLT GTFL G IHIG GR GD PS Sbjct: 121 FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPS 180 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQI 238 SL + RLKTGTP R+D +TI + +Q D L FSFM + + RQ+ Sbjct: 181 ISLSRRLRELPLRVSRLKTGTPPRIDARTIDFSVLAQQHGDTPLPVFSFMGNAAQHPRQV 240 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPE Sbjct: 241 PCYITHTNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQIFLEPE 300 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL ++ +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K Sbjct: 301 GLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENARIVRPGYAIEYDFFDPRDLKPTLESK 360 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I GLF AGQINGTTGYEEAAAQGL+AG+N+AR S + + SR +Y+GV++DDL + Sbjct: 361 FIHGLFFAGQINGTTGYEEAAAQGLLAGLNAARFSAEKEGWAPSRAQAYLGVLVDDLCTL 420 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYRMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R L Sbjct: 421 GTKEPYRMFTSRAEYRLMLREDNADLRLTAMGRELGLVDDARWARFNEKLESIERERQRL 480 Query: 479 KSLVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIE 534 KS +T ++ ++ + + + L P+ + + L + P A E Sbjct: 481 KSAWVTPSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEQLVQLSPFAPGLEDVQAAE 540 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E ++ + E L+P DY + LSNE+ KL+ KP ++ Q Sbjct: 541 QVEIQVKYEGYIARQQDEIEKQQRNENTLLPATLDYRQVTGLSNEVIAKLNDHKPSSIGQ 600 Query: 595 ASKIEGMTPAALNLLLIYIKKNTV 618 AS+I G+TPAA+++LL+++KK + Sbjct: 601 ASRISGITPAAISILLVWLKKQGM 624 >gi|145640560|ref|ZP_01796144.1| glucose-inhibited division protein A [Haemophilus influenzae R3021] gi|145275146|gb|EDK15008.1| glucose-inhibited division protein A [Haemophilus influenzae 22.4-21] Length = 629 Score = 816 bits (2107), Expect = 0.0, Method: Composition-based stats. Identities = 297/622 (47%), Positives = 395/622 (63%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +YDVIVIGGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 YTETYDVIVIGGGHAGTEAALAPARMGFKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DA+ GLM AD AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q Sbjct: 63 VDAMGGLMAHAADKAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 E E++ ++ + + + R +VVLT GTFL G IHIG GR GD S + Sbjct: 123 QEATDILIEQDRVTGVSTKMGLIFRAKSVVLTAGTFLAGKIHIGLENYEGGRAGDPASVN 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IEC 240 L + RLKTGTP R+D +TI +D +KQ D L FSFM + Q I C Sbjct: 183 LSHRLRDLGLRVDRLKTGTPPRIDARTINFDILDKQHGDAVLPVFSFMGSVEDHPQQIPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL Sbjct: 243 YITHTNEQTHEVIRNNLNRSPMYTGVIEGIGPRYCPSIEDKVMRFSDRNSHQIYLEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 ++ VYPNGIST+LP ++Q + ++ GLEK II+PGYAIEYDY +P++L PTLETK I Sbjct: 303 TSNEVYPNGISTSLPFDVQMGIVNSMKGLEKARIIKPGYAIEYDYFDPRDLKPTLETKSI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 SGLF AGQINGTTGYEEAAAQGL+AGIN+ + D R SY GV++DDL + G Sbjct: 363 SGLFFAGQINGTTGYEEAAAQGLLAGINAGLYVQEKDAWYPRRDQSYTGVLVDDLCTLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYR+FTSRAEYR+ LR DNAD RLTPI +LG I + R RF + ++ R L+S Sbjct: 423 KEPYRVFTSRAEYRLLLREDNADIRLTPIAHELGLIDDARWARFNQKMENIEQERQRLRS 482 Query: 481 LVLTSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 + L ++ + + + + + L P+ + L S+ P +E++ Sbjct: 483 IWLHPRSEYLEEANKVLGSPLVREASGEDLLRRPEMTYDILTSLTPYQPAMEDREAVEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I Y Y Q E ++ K E IP +FDYS + LSNE++ KL +P ++ QAS Sbjct: 543 EIAIKYQGYIEHQQEEIEKQKRHENTAIPANFDYSKVSGLSNEVRAKLEQHRPVSIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA++++L+ +KK + Sbjct: 603 RISGITPAAISIILVNLKKQGM 624 >gi|229099910|ref|ZP_04230833.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus Rock3-29] gi|229118973|ref|ZP_04248318.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus Rock1-3] gi|228664498|gb|EEL19994.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus Rock1-3] gi|228683525|gb|EEL37480.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus Rock3-29] Length = 629 Score = 816 bits (2107), Expect = 0.0, Method: Composition-based stats. Identities = 284/619 (45%), Positives = 393/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEDGVCKGVITQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETK I L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKNIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVILGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G ++G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEVGREIGLIKEERYERFTNKKLQIEQEKERLGSIIIK 486 Query: 485 S-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + S S +DG A + L P+ + +++ + P + S V E+++I+ Sbjct: 487 PRPEVQELIRSIGGSELKDGIR--ASDLLRRPEMTYEHIHLLVPSEVELSDEVTEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS+I Sbjct: 545 TKYEGYIEKSLQQVERMKKMENKKIPVDIDYDAISSLASEARQKLKDVRPLSMGQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 605 GVNPADISILLVYIEQGKI 623 >gi|218234811|ref|YP_002370258.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus B4264] gi|228961747|ref|ZP_04123350.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis serovar pakistani str. T13001] gi|229051152|ref|ZP_04194696.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus AH676] gi|229112896|ref|ZP_04242427.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus Rock1-15] gi|229148033|ref|ZP_04276372.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus BDRD-ST24] gi|296505911|ref|YP_003667611.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus thuringiensis BMB171] gi|218162768|gb|ACK62760.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus B4264] gi|228635458|gb|EEK91949.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus BDRD-ST24] gi|228670575|gb|EEL25888.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus Rock1-15] gi|228722215|gb|EEL73616.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus AH676] gi|228797941|gb|EEM44951.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis serovar pakistani str. T13001] gi|296326963|gb|ADH09891.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus thuringiensis BMB171] Length = 629 Score = 816 bits (2107), Expect = 0.0, Method: Composition-based stats. Identities = 285/619 (46%), Positives = 394/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFAYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E+ + +V Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEEGVCKGVVTQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVVLGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G ++G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEVGREIGLIKEERYERFTNKKLQIEQEKERLSSIIIK 486 Query: 485 S-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + + S +DG A + L P+ + +++ + P + S V E+++I+ Sbjct: 487 PRPEVQELIRNIGGSELKDGIR--ASDLLRRPEMTYEHIHLLVPSEVELSDEVKEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS+I Sbjct: 545 IKYEGYIEKSLQQVERMKKMESKKIPVDIDYDAISSLASEARQKLKDVRPLSMGQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 605 GVNPADISILLVYIEQGKI 623 >gi|145637945|ref|ZP_01793586.1| glucose-inhibited division protein A [Haemophilus influenzae PittHH] gi|145268859|gb|EDK08821.1| glucose-inhibited division protein A [Haemophilus influenzae PittHH] Length = 629 Score = 816 bits (2107), Expect = 0.0, Method: Composition-based stats. Identities = 297/622 (47%), Positives = 395/622 (63%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +YDVIVIGGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 YTETYDVIVIGGGHAGTEAALAPARMGFKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DA+ GLM AD AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q Sbjct: 63 VDAMGGLMAHAADKAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 E E++ ++ + + + R +VVLT GTFL G IHIG GR GD S + Sbjct: 123 QEAIDILIEQDRVTGVSTKMGLIFRAKSVVLTAGTFLAGKIHIGLENYEGGRAGDPASVN 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IEC 240 L + RLKTGTP R+D +TI +D KQ DE L FSFM + Q I C Sbjct: 183 LSHRLRDLGLRVDRLKTGTPPRIDARTINFDILTKQHGDEVLPVFSFMGSVEDHPQQIPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL Sbjct: 243 YITHTNEQTHEVIRNNLDRSPMYTGVIEGIGPRYCPSIEDKVMRFADRNSHQIYLEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 ++ VYPNGIST+LP ++Q + ++ GLEK II+PGYAIEYDY +P++L PTLETK I Sbjct: 303 TSNEVYPNGISTSLPFDVQMGIVNSMKGLEKARIIKPGYAIEYDYFDPRDLKPTLETKSI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 SGLF AGQINGTTGYEEAAAQGL+AGIN+ + + R SY GV++DDL + G Sbjct: 363 SGLFFAGQINGTTGYEEAAAQGLLAGINAGLYVQEKEAWYPRRDQSYTGVLVDDLCTLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYR+FTSRAEYR+ LR DNAD RLTPI +LG I + R RF K ++ R L++ Sbjct: 423 KEPYRVFTSRAEYRLLLREDNADIRLTPIAHELGLIDDARWARFNKKMENIEQERQRLRN 482 Query: 481 LVLTSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 + L ++ + + + + + L P+ + L S+ P +E++ Sbjct: 483 IWLHPRSEYLEEANKVLGSPLVREASGEDLLRRPEMTYDILTSLTPYKPAMEDKEAVEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I Y Y Q E ++ K E IP +FDYS + LSNE++ KL +P ++ QAS Sbjct: 543 EIAIKYQGYIEHQQEEIEKQKRHENTAIPANFDYSKVSGLSNEVRAKLEQHRPVSIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA++++L+ +KK + Sbjct: 603 RISGITPAAISIILVNLKKQGM 624 >gi|206578873|ref|YP_002241278.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Klebsiella pneumoniae 342] gi|288937917|ref|YP_003441976.1| glucose inhibited division protein A [Klebsiella variicola At-22] gi|206567931|gb|ACI09707.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Klebsiella pneumoniae 342] gi|288892626|gb|ADC60944.1| glucose inhibited division protein A [Klebsiella variicola At-22] Length = 629 Score = 816 bits (2107), Expect = 0.0, Method: Composition-based stats. Identities = 291/624 (46%), Positives = 395/624 (63%), Gaps = 6/624 (0%) Query: 1 MINRS-YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLV 59 M + +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV Sbjct: 1 MFYQDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLV 60 Query: 60 REIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDV 119 +E+DAL GLM D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Sbjct: 61 KEVDALGGLMATAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMI 120 Query: 120 IQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 Q V E + + V Q R VVLT GTFL G IHIG GR GD PS Sbjct: 121 FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPS 180 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQI 238 L + RLKTGTP R+D +TI + +Q D + FSFM + RQ+ Sbjct: 181 IPLSRRLRELPLRVSRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGSADQHPRQV 240 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPE Sbjct: 241 PCYITHTNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQIFLEPE 300 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL ++ +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K Sbjct: 301 GLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENARIVRPGYAIEYDFFDPRDLKPTLESK 360 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I GLF AGQINGTTGYEEAAAQGL+AG+N+AR S + + R +Y+GV++DDL + Sbjct: 361 FIQGLFFAGQINGTTGYEEAAAQGLLAGLNAARFSAEKEGWAPRRDQAYLGVLVDDLCTL 420 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYRMFTSRAEYR+ LR DNAD RLT G +LG + + R R+ + ++ R L Sbjct: 421 GTKEPYRMFTSRAEYRLMLREDNADLRLTEQGRELGLVDDERWARYNEKLESIERERQRL 480 Query: 479 KSLVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIE 534 KS + + S+ ++ + + + L P+ + + L + P A E Sbjct: 481 KSTWVNPQAESAAEVNAHLTAPLSREASGEDLLRRPEMTYEQLIQLSPFAPGLEDQQAAE 540 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E ++ + E ++P DY + LSNE+ KL+ KP ++ Q Sbjct: 541 QVEIQVKYEGYIARQQDEIEKQQRNENTVLPATLDYRQVTGLSNEVIAKLNDHKPSSIGQ 600 Query: 595 ASKIEGMTPAALNLLLIYIKKNTV 618 AS+I G+TPAA+++LL+++KK + Sbjct: 601 ASRISGITPAAISILLVWLKKQGM 624 >gi|290511657|ref|ZP_06551025.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Klebsiella sp. 1_1_55] gi|289775447|gb|EFD83447.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Klebsiella sp. 1_1_55] Length = 629 Score = 816 bits (2107), Expect = 0.0, Method: Composition-based stats. Identities = 291/624 (46%), Positives = 395/624 (63%), Gaps = 6/624 (0%) Query: 1 MINRS-YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLV 59 M + +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV Sbjct: 1 MFYQDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLV 60 Query: 60 REIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDV 119 +E+DAL GLM D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Sbjct: 61 KEVDALGGLMATAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMI 120 Query: 120 IQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 Q V E + + V Q R VVLT GTFL G IHIG GR GD PS Sbjct: 121 FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPS 180 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQI 238 L + RLKTGTP R+D +TI + +Q D + FSFM + RQ+ Sbjct: 181 IPLSRRLRELPLRVSRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGSVDQHPRQV 240 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPE Sbjct: 241 PCYITHTNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQIFLEPE 300 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL ++ +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K Sbjct: 301 GLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENARIVRPGYAIEYDFFDPRDLKPTLESK 360 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I GLF AGQINGTTGYEEAAAQGL+AG+N+AR S + + R +Y+GV++DDL + Sbjct: 361 FIQGLFFAGQINGTTGYEEAAAQGLLAGLNAARFSAEKEGWAPRRDQAYLGVLVDDLCTL 420 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYRMFTSRAEYR+ LR DNAD RLT G +LG + + R R+ + ++ R L Sbjct: 421 GTKEPYRMFTSRAEYRLMLREDNADLRLTEQGRELGLVDDERWARYNEKLESIERERQRL 480 Query: 479 KSLVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIE 534 KS + + S+ ++ + + + L P+ + + L + P A E Sbjct: 481 KSTWVNPQAESAAEVNAHLTAPLSREASGEDLLRRPEMTYEQLIQLSPFAPGLEDQQAAE 540 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E ++ + E ++P DY + LSNE+ KL+ KP ++ Q Sbjct: 541 QVEIQVKYEGYIARQQDEIEKQQRNENTVLPATLDYRQVTGLSNEVIAKLNDHKPSSIGQ 600 Query: 595 ASKIEGMTPAALNLLLIYIKKNTV 618 AS+I G+TPAA+++LL+++KK + Sbjct: 601 ASRISGITPAAISILLVWLKKQGM 624 >gi|291615571|ref|YP_003518313.1| GidA [Pantoea ananatis LMG 20103] gi|291150601|gb|ADD75185.1| GidA [Pantoea ananatis LMG 20103] Length = 696 Score = 816 bits (2107), Expect = 0.0, Method: Composition-based stats. Identities = 292/624 (46%), Positives = 390/624 (62%), Gaps = 6/624 (0%) Query: 1 MINRS-YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLV 59 M + +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV Sbjct: 68 MFYQDPFDVIVIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLV 127 Query: 60 REIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDV 119 +E+DAL GLM D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Sbjct: 128 KEVDALGGLMAGAIDRAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMI 187 Query: 120 IQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 Q V E + + V Q R TVVLT GTFL G IHIG GR GD PS Sbjct: 188 FQQAVDDLIVENDRVVGAVTQMGLKFRAKTVVLTVGTFLDGKIHIGLDNYSGGRAGDPPS 247 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-I 238 L RLKTGTP R+D ++I + Q D + FSFM + + Q + Sbjct: 248 IPLAKRLRALPLRVDRLKTGTPPRIDARSIDFSVLAPQHGDNPMPVFSFMGNAGQHPQQV 307 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C +T TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPE Sbjct: 308 PCWMTYTNEKTHDVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNSHQIFLEPE 367 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL ++ +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L TLE+K Sbjct: 368 GLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKLTLESK 427 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I GLF AGQINGTTGYEEAAAQGL+AG+N+AR+S + R +Y+GV++DDL + Sbjct: 428 FIDGLFFAGQINGTTGYEEAAAQGLLAGLNAARQSADKEGWAPRRDQAYLGVLVDDLCTL 487 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYRMFTSRAEYR+ LR DNAD RLT G +LG + + R RF + ++ R L Sbjct: 488 GTKEPYRMFTSRAEYRLMLREDNADLRLTETGRELGLVDDARWARFNQKLEAIEQERQRL 547 Query: 479 KSLVLTSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIE 534 + + + K+ + +I+ K +A + L P+ + L ++ E Sbjct: 548 RDIWVHPKSEHVEAVNTITSSPLTKEASAEDLLRRPEMTYLKLMALDAFGPALADEQAAE 607 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E E L+P DY + LSNE+ KL+ KP ++ Q Sbjct: 608 QVEIQVKYEGYIARQQEEIDRQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPVSIGQ 667 Query: 595 ASKIEGMTPAALNLLLIYIKKNTV 618 AS+I G+TPAA+++LLIY+KK + Sbjct: 668 ASRISGVTPAAISILLIYLKKQGL 691 >gi|145633461|ref|ZP_01789190.1| glucose-inhibited division protein A [Haemophilus influenzae 3655] gi|144985830|gb|EDJ92438.1| glucose-inhibited division protein A [Haemophilus influenzae 3655] Length = 629 Score = 816 bits (2107), Expect = 0.0, Method: Composition-based stats. Identities = 297/622 (47%), Positives = 393/622 (63%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +YDVIVIGGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 YTETYDVIVIGGGHAGTEAALAPARMGLKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DA+ GLM AD AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q Sbjct: 63 VDAMGGLMAHAADKAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 E E++ ++ + + + R +VVLT GTFL G IHIG GR GD S + Sbjct: 123 QEATDILIEQDRVTGVSTKMGLIFRAKSVVLTAGTFLAGKIHIGLENYEGGRAGDPASVN 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IEC 240 L RLKTGTP R+D +TI +D KQ D L FSFM + Q I C Sbjct: 183 LSYRLRDLGLRVDRLKTGTPPRIDARTINFDILAKQHGDAVLPVFSFMGSVSDHPQQIPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL Sbjct: 243 YITHTNEQTHEVIRNNLDRSPMYTGVIEGVGPRYCPSIEDKVMRFADRNSHQIYLEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 ++ VYPNGIST+LP ++Q + ++ GLEK II+PGYAIEYDY +P++L PTLETK I Sbjct: 303 TSNEVYPNGISTSLPFDVQMGIVNSMKGLEKARIIKPGYAIEYDYFDPRDLKPTLETKAI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 SGLF AGQINGTTGYEEAAAQGL+AGIN+ + + R SY GV++DDL + G Sbjct: 363 SGLFFAGQINGTTGYEEAAAQGLLAGINAGLYVQEKEAWYPRRDQSYTGVLVDDLCTLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYR+FTSRAEYR+ LR DNAD RLTPI +LG I E R RF + ++ R L+S Sbjct: 423 KEPYRVFTSRAEYRLLLREDNADIRLTPIAHELGLIDEARWARFNQKMENIELERQRLRS 482 Query: 481 LVLTSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 + L ++ + + + + + L P+ + L S+ P +E++ Sbjct: 483 IWLHPRSEYLEEANKVLGSPLVREASGEDLLRRPEMTYDILTSLTPYKPAIEDREAVEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I Y Y Q E ++ K E IP +FDYS + LSNE++ KL +P ++ QAS Sbjct: 543 EIAIKYQGYIEHQQEEIEKQKRHENTAIPANFDYSKVSGLSNEVRAKLEQHRPVSIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA++++L+ +KK + Sbjct: 603 RISGITPAAISIILVNLKKQGM 624 >gi|319651094|ref|ZP_08005228.1| glucose-inhibited division protein A [Bacillus sp. 2_A_57_CT2] gi|317397264|gb|EFV77968.1| glucose-inhibited division protein A [Bacillus sp. 2_A_57_CT2] Length = 629 Score = 815 bits (2106), Expect = 0.0, Method: Composition-based stats. Identities = 277/619 (44%), Positives = 391/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+G GHAG EA +A+LGA T +IT + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVVGAGHAGVEAGLASARLGAKTLMITINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ R+LN KGPAVR R QAD+ Y+ M++ + ++ NL +IQG V Sbjct: 67 LGGEMGKNIDKTHIQMRMLNTGKGPAVRALRAQADKFTYQHEMKKTLENEPNLTLIQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E +V Q ++ VV+TTGTFLRG I +G+LK +G PS L Sbjct: 127 ERLIVEDGECRGVVTQTGAVYHSKAVVITTGTFLRGEIILGELKYSSGPNNQQPSIKLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ +I + KTE Q D+ FS+ T K Q+ C +T Sbjct: 187 HLQELGFDLVRFKTGTPPRVNSHSIDYSKTEIQPGDDVPRAFSYETTKYITDQLPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN ETH +I N+ S +YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TNEETHTLIDNNLHRSPMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q + +RTIPGLE V ++R GYAIEYD I P +L+PTLETKK+ L+ Sbjct: 307 VYVQGLSTSLPEDVQQKILRTIPGLENVQMMRAGYAIEYDSIVPTQLWPTLETKKVKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AG+N+ KS + + SR+D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGMNAGLKSLDKEEVILSRSDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G K+G I E R ++F Q ++ L+ +++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTELGRKVGLISEERYEKFLMKKQAIEEEKARLQGIIIK 486 Query: 485 SKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + S S +DG A + L P+ + +++ + P V E+++I+ Sbjct: 487 PTSDVQELIKSQGGSELKDGIR--ASDLLKRPEMTYEHIQQVVPAESTLDPDVTEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + + +K E + IP++ DY + L++E ++KL ++P +L QAS+I Sbjct: 545 IKYEGYIEKSLQQVERLKKMENKKIPENIDYDDINGLASEARQKLKEVRPLSLAQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+Y+++ + Sbjct: 605 GVNPADISILLVYLEQGRI 623 >gi|301019838|ref|ZP_07183978.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 196-1] gi|299882052|gb|EFI90263.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Escherichia coli MS 196-1] Length = 617 Score = 815 bits (2106), Expect = 0.0, Method: Composition-based stats. Identities = 291/611 (47%), Positives = 392/611 (64%), Gaps = 5/611 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+D +TI + +Q D + FSFM + + Q + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 ++ ++ + + + L P+ + + L ++ P A E+++I+ Sbjct: 487 PSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLI 611 +TPAA+++LL+ Sbjct: 607 VTPAAISILLV 617 >gi|68249206|ref|YP_248318.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Haemophilus influenzae 86-028NP] gi|81170546|sp|Q4QMT9|MNMG_HAEI8 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|68057405|gb|AAX87658.1| glucose inhibited division protein A [Haemophilus influenzae 86-028NP] Length = 629 Score = 815 bits (2106), Expect = 0.0, Method: Composition-based stats. Identities = 297/622 (47%), Positives = 394/622 (63%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +YDVIVIGGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 YTETYDVIVIGGGHAGTEAALAPARMGLKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DA+ GLM AD AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q Sbjct: 63 VDAMGGLMAHAADKAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 E E++ ++ + + + R +VVLT GTFL G IHIG GR GD S + Sbjct: 123 QEATDILIEQDRVTGVSTKMGLIFRAKSVVLTAGTFLAGKIHIGLENYEGGRAGDPASVN 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IEC 240 L RLKTGTP R+D +TI +D KQ D L FSFM + Q I C Sbjct: 183 LSYRLRDLGLRVDRLKTGTPPRIDARTINFDILAKQHGDAVLPVFSFMGSVSDHPQQIPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL Sbjct: 243 YITHTNEQTHEVIRNNLDRSPMYTGVIEGIGPRYCPSIEDKVMRFADRNSHQIYLEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 ++ VYPNGIST+LP ++Q + ++ GLEK II+PGYAIEYDY +P++L PTLETK I Sbjct: 303 TSNEVYPNGISTSLPFDVQMGIVNSMKGLEKARIIKPGYAIEYDYFDPRDLKPTLETKAI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 SGLF AGQINGTTGYEEAAAQGL+AGIN+ + + R SY GV++DDL + G Sbjct: 363 SGLFFAGQINGTTGYEEAAAQGLLAGINAGLYVQEKEAWYPRRDQSYTGVLVDDLCTLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYR+FTSRAEYR+ LR DNAD RLTPI +LG I E R RF + +++ R L+S Sbjct: 423 KEPYRVFTSRAEYRLLLREDNADIRLTPIAHELGLIDEARWARFNQKMEKIEQERQRLRS 482 Query: 481 LVLTSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 + L ++ + + + + + L P+ + L S+ P +E++ Sbjct: 483 IWLHPRSEYLEEANKVLGSPLVREASGEDLLRRPEMTYDILTSLTPYKPAIEDREAVEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I Y Y Q E ++ K E IP +FDYS + LSNE++ KL +P ++ QAS Sbjct: 543 EIAIKYQGYIEHQQEEIEKQKRHENTAIPANFDYSKVSGLSNEVRAKLEQHRPVSIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA++++L+ +KK + Sbjct: 603 RISGITPAAISIILVNLKKQGM 624 >gi|295095367|emb|CBK84457.1| glucose-inhibited division protein A [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 629 Score = 815 bits (2106), Expect = 0.0, Method: Composition-based stats. Identities = 290/624 (46%), Positives = 401/624 (64%), Gaps = 6/624 (0%) Query: 1 MINRS-YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLV 59 M + +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV Sbjct: 1 MFYQDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLV 60 Query: 60 REIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDV 119 +E+DAL GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Sbjct: 61 KEVDALGGLMAKAIDHAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMI 120 Query: 120 IQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 Q V E + + V Q R VVLT GTFL G IHIG GR GD PS Sbjct: 121 FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPS 180 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-I 238 L + RLKTGTP R+D +TI + +Q D + FSFM + + Q + Sbjct: 181 IPLSRRLRELPLRVSRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNAAQHPQQV 240 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPE Sbjct: 241 PCYITHTNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQIFLEPE 300 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL ++ +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K Sbjct: 301 GLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESK 360 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I GLF AGQINGTTGYEEAAAQGL+AG+N+AR S + + +R+ +Y+GV++DDL + Sbjct: 361 FIQGLFFAGQINGTTGYEEAAAQGLLAGLNAARFSAEKEGWAPARSQAYLGVLVDDLCTL 420 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYRMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R L Sbjct: 421 GTKEPYRMFTSRAEYRLMLREDNADLRLTEVGRELGLVDDERWARFNEKLERIEQERQRL 480 Query: 479 KSLVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIE 534 K+ + + ++ ++ + + + L P+ + +NL + A + E Sbjct: 481 KTTWVNPQAETAAEVNAHLTAPLSREASGEDLLRRPEVTYENLVKLTAFAPGLEDAEAAE 540 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E ++ + E L+P+ DY + LSNE+ KL+ KP ++ Q Sbjct: 541 QVEIQVKYEGYIARQQDEIEKQQRNENTLLPEMLDYRQVTGLSNEVIAKLNDHKPVSIGQ 600 Query: 595 ASKIEGMTPAALNLLLIYIKKNTV 618 AS+I G+TPAA+++LL+++KK + Sbjct: 601 ASRISGVTPAAISILLVWLKKQGM 624 >gi|228942632|ref|ZP_04105164.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228975562|ref|ZP_04136114.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228982198|ref|ZP_04142487.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis Bt407] gi|228777550|gb|EEM25828.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis Bt407] gi|228784172|gb|EEM32199.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817058|gb|EEM63151.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326943281|gb|AEA19177.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus thuringiensis serovar chinensis CT-43] Length = 629 Score = 815 bits (2106), Expect = 0.0, Method: Composition-based stats. Identities = 286/619 (46%), Positives = 394/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E+ I +V Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEEGICKGVVTQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRSFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVVLGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G ++G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEVGREIGLIKEERYERFTNKKLQIEQEKERLSSIIIK 486 Query: 485 S-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + + S +DG A + L P+ + +++ + P + S V E+++I+ Sbjct: 487 PRPEVQELIRNIGGSELKDGIR--ASDLLRRPEMTYEHIHLLVPSEVELSDEVTEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS+I Sbjct: 545 IKYEGYIEKSLQQVERMKKMESKKIPVDIDYDAISSLASEARQKLKDVRPLSMGQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 605 GVNPADISILLVYIEQGKI 623 >gi|229153642|ref|ZP_04281818.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus m1550] gi|228629828|gb|EEK86481.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus m1550] Length = 629 Score = 815 bits (2105), Expect = 0.0, Method: Composition-based stats. Identities = 284/619 (45%), Positives = 394/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFAYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E+ + ++ Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEEGVCKGVITQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVVLGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G ++G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEVGREIGLIKEERYERFTNKKLQIEQEKERLSSIIIK 486 Query: 485 S-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + + S +DG A + L P+ + +++ + P + S V E+++I+ Sbjct: 487 PRPEVQELIRNIGGSELKDGIR--ASDLLRRPEMTYEHIHLLVPSEVELSDEVKEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS+I Sbjct: 545 IKYEGYIEKSLQQVERMKKMESKKIPVDIDYDAISSLASEARQKLKDVRPLSMGQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 605 GVNPADISILLVYIEQGKI 623 >gi|121189|sp|P25756|MNMG_PSEPU RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|581463|emb|CAA44419.1| unnamed protein product [Pseudomonas putida] Length = 630 Score = 815 bits (2105), Expect = 0.0, Method: Composition-based stats. Identities = 289/617 (46%), Positives = 384/617 (62%), Gaps = 5/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FDVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGHMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D +GIQFRVLN +KGPAVR R QADR +Y+ ++ + +Q NL + Q Sbjct: 67 GGAMALATDKSGIQFRVLNNRKGPAVRATRAQADRAIYKAVVREILENQPNLWIFQQNCD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q +VVLTTGTFL G+IHIG GR GD PS +L + Sbjct: 127 DLIVEQDQVKGVVTQMGLRFFAESVVLTTGTFLGGLIHIGLQNHSGGRAGDPPSIALAHR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SFM + ++ RQ+ C IT Sbjct: 187 MRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFMGNAEMHPRQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGLNT Sbjct: 247 TNARTHEIIASNLDRSPMYSGVIEGVGPRYCPSIEDKIHRFADKESHQVFIEPEGLNTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q + +R+I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLELVRSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG I ++R F LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLIDDQRWAAFCAKRDGIEREEQRLKSTWVR 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +I K + L+ P+ L V E+++I + Sbjct: 487 PNTEQGQAIVDKFGTPLSHEYSLLNLLARPEIDYAGLIEATGG-EAIDPQVAEQVEIRTK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E ++ E +P D DY+++ LS E++ KLS +P L QAS+I G+ Sbjct: 546 YAGYIDRQQDEIARLRASEDTRLPVDIDYTTISGLSKEIQGKLSQTRPQTLGQASRIPGV 605 Query: 602 TPAALNLLLIYIKKNTV 618 TPAA++LLLI++KK Sbjct: 606 TPAAISLLLIHLKKRGA 622 >gi|301155227|emb|CBW14692.1| glucose-inhibited cell-division protein [Haemophilus parainfluenzae T3T1] Length = 629 Score = 815 bits (2105), Expect = 0.0, Method: Composition-based stats. Identities = 296/622 (47%), Positives = 393/622 (63%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +YDVIV+GGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 YTENYDVIVVGGGHAGTEAALAPARMGLKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DA+ GLM AD AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q Sbjct: 63 VDAMGGLMAHAADKAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRIALENQPNLDIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 EV E++ + + + R +V+LT GTFL G IHIG GR GD S + Sbjct: 123 QEVTDILIEQDRVCGVETKMGLKFRAKSVILTAGTFLAGKIHIGLEHYEGGRAGDPASVT 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IEC 240 L + + RLKTGTP R+D +TI +D KQ D L FSFM + Q I C Sbjct: 183 LSHRLRDLNLRVDRLKTGTPPRIDARTINFDILAKQHGDAVLPVFSFMGSVDDHPQQIPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL Sbjct: 243 YITHTNEQTHEVIRNNLDRSPMYTGVIEGIGPRYCPSIEDKVMRFADRNSHQIYLEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 ++ VYPNGIST+LP ++Q + ++ GLEK II+PGYAIEYDY +P++L PTLETK I Sbjct: 303 TSNEVYPNGISTSLPFDVQMGIVNSMKGLEKARIIKPGYAIEYDYFDPRDLKPTLETKSI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 SGLF AGQINGTTGYEEAAAQGL+AGIN+ + + R SY GV++DDL + G Sbjct: 363 SGLFFAGQINGTTGYEEAAAQGLLAGINAGLYVQEKEAWYPRRDQSYTGVLVDDLCTLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYR+FTSRAEYR+ LR DNAD RLTPI +LG I E R RF + ++ R L+S Sbjct: 423 KEPYRVFTSRAEYRLLLREDNADIRLTPIAHELGLIDEARWARFNQKMENIEQERQRLRS 482 Query: 481 LVLTSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 + L ++ + + + + L P+ + L S+ P +E++ Sbjct: 483 IWLHPRSEYLEEANKVLGSPLVREANGEDLLRRPEITYDILTSLTPYKPAMEDREAVEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I Y Y Q E ++ K E IP +FDYS + LSNE++ KL +P ++ QAS Sbjct: 543 EIAIKYQGYIEHQQEEIEKQKRHENTAIPANFDYSKVSGLSNEVRAKLEQHRPVSIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA++++L+ +KK + Sbjct: 603 RISGITPAAISIILVNLKKQGM 624 >gi|301169298|emb|CBW28896.1| glucose-inhibited cell-division protein [Haemophilus influenzae 10810] Length = 629 Score = 815 bits (2105), Expect = 0.0, Method: Composition-based stats. Identities = 298/622 (47%), Positives = 393/622 (63%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +YDVIVIGGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 YTETYDVIVIGGGHAGTEAALAPARMGLKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DA+ GLM AD AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q Sbjct: 63 VDAMGGLMAHAADKAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 E E++ ++ + + + R +VVLT GTFL G IHIG GR GD S + Sbjct: 123 QEATDILIEQDRVTGVSTKMGLIFRAKSVVLTAGTFLAGKIHIGLENYEGGRAGDPASVN 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IEC 240 L RLKTGTP R+D +TI +D KQ D L FSFM + Q I C Sbjct: 183 LSYRLRDLGLRVDRLKTGTPPRIDARTINFDILAKQHGDAVLPVFSFMGSVSDHPQQIPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL Sbjct: 243 YITHTNEQTHEVIRNNLDRSPMYTGVIEGIGPRYCPSIEDKVMRFADRNSHQIYLEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 ++ VYPNGIST+LP ++Q + ++ GLEK II+PGYAIEYDY +P++L PTLETK I Sbjct: 303 TSNEVYPNGISTSLPFDVQMGIVNSMKGLEKARIIKPGYAIEYDYFDPRDLKPTLETKAI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 SGLF AGQINGTTGYEEAAAQGL+AGIN+ + D R SY GV++DDL + G Sbjct: 363 SGLFFAGQINGTTGYEEAAAQGLLAGINAGLYVQEKDAWYPRRDQSYTGVLVDDLCTLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYR+FTSRAEYR+ LR DNAD RLTPI +LG I E R RF + ++ R L+S Sbjct: 423 KEPYRVFTSRAEYRLLLREDNADIRLTPIAHELGLIDEARWARFNQKMENIEQERQRLRS 482 Query: 481 LVLTSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 + L ++ + + + + + L P+ + L S+ P +E++ Sbjct: 483 IWLHPRSEYLEEANKVLGSPLVREASGEDLLRRPEMTYDILTSLTPYKPAMEDREAVEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I Y Y Q E ++ K E IP +FDYS + LSNE++ KL +P ++ QAS Sbjct: 543 EIAIKYQGYIEHQQEEIEKQKRHENTAIPANFDYSKVSGLSNEVRAKLEQHRPVSIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA++++L+ +KK + Sbjct: 603 RISGITPAAISIILVNLKKQGM 624 >gi|283787570|ref|YP_003367435.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme (glucose-inhibited division protein A) [Citrobacter rodentium ICC168] gi|282951024|emb|CBG90702.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme (glucose-inhibited division protein A) [Citrobacter rodentium ICC168] Length = 629 Score = 814 bits (2104), Expect = 0.0, Method: Composition-based stats. Identities = 290/618 (46%), Positives = 396/618 (64%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + RLKTGTP R+D +TI + +Q D + FSFM + + Q + C IT Sbjct: 187 LRELPLRVSRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNAAQHPQQVPCYITY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIHGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEMGRELGLVDDERWARFNEKLENIERERQRLKSTWIT 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPD-ARKFSSLVIERLQIES 540 ++ ++ + + + L P+ + L ++ P + E+++I+ Sbjct: 487 PTAETAVEVNAHLTAPLSREASGEDLLRRPEMTYAQLTALSPFAPALADAQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ + E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQQRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPVSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LL+++KK + Sbjct: 607 VTPAAISILLVWLKKQGM 624 >gi|145635868|ref|ZP_01791558.1| glucose-inhibited division protein A [Haemophilus influenzae PittAA] gi|148825138|ref|YP_001289891.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Haemophilus influenzae PittEE] gi|166222937|sp|A5U9Q7|MNMG_HAEIE RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|145266880|gb|EDK06894.1| glucose-inhibited division protein A [Haemophilus influenzae PittAA] gi|148715298|gb|ABQ97508.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Haemophilus influenzae PittEE] Length = 629 Score = 814 bits (2104), Expect = 0.0, Method: Composition-based stats. Identities = 295/622 (47%), Positives = 395/622 (63%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +YDVIVIGGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 YTETYDVIVIGGGHAGTEAALAPARMGFKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DA+ GLM AD AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q Sbjct: 63 VDAMGGLMAHAADKAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 E E++ ++ + + + R +VVLT GTFL G IHIG GR GD S + Sbjct: 123 QEATDILIEQDRVTGVSTKMGLIFRAKSVVLTAGTFLAGKIHIGLENYEGGRAGDPASVN 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IEC 240 L + RLKTGTP R+D +TI +D KQ DE L FSFM + Q I C Sbjct: 183 LSHRLRDLGLRVDRLKTGTPPRIDARTINFDILAKQHGDEVLPMFSFMGSVDDHPQQIPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL Sbjct: 243 YITYTNEQTHEVIRNNLDRSPMYTGVIEGIGPRYCPSIEDKVMRFSDRNSHQIYLEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 ++ VYPNGIST+LP ++Q + ++ GLE I++PGYAIEYDY +P++L PTLETK I Sbjct: 303 TSNEVYPNGISTSLPFDVQMGIVNSMKGLENARIVKPGYAIEYDYFDPRDLKPTLETKSI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 SGLF AGQINGTTGYEEAAAQGL+AGIN+ + D R SY GV++DDL + G Sbjct: 363 SGLFFAGQINGTTGYEEAAAQGLLAGINAGLYVQEKDAWYPRRDQSYTGVLVDDLCTLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYR+FTSRAEYR+ LR DNAD RLTPI +LG I + R RF + ++ R L++ Sbjct: 423 KEPYRVFTSRAEYRLLLREDNADIRLTPIAHELGLIDDARWARFNQKMENIEQERQRLRN 482 Query: 481 LVLTSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 + L ++ + + + + + L P+ + L S+ P +E++ Sbjct: 483 IWLHPRSEYLEEANKVLGSPLVREASGEDLLRRPEMTYDILTSLTPYKPAMEDKEAVEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I Y Y Q E ++ K E IP +FDYS + +LSNE++ KL +P ++ QAS Sbjct: 543 EIAIKYQGYIEHQQEEIEKQKRHENTAIPANFDYSKVSSLSNEVRAKLEQHRPVSISQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA++++L+ +KK + Sbjct: 603 RISGITPAAISIILVNLKKQGM 624 >gi|229026924|ref|ZP_04183247.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus AH1272] gi|228734382|gb|EEL85053.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus AH1272] Length = 629 Score = 814 bits (2104), Expect = 0.0, Method: Composition-based stats. Identities = 284/619 (45%), Positives = 392/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEDGVCKGVITQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVILGRADAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G ++G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEVGREIGLIKEDRYERFTNKKLQIEQEKERLGSIIIK 486 Query: 485 S-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + S S +DG A + L P+ + +++ + P S + E+++I+ Sbjct: 487 PRPEVQELIRSIGGSELKDGIR--ASDLLRRPEVTYEHIHLLVPSEVALSDEITEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + Y Y + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS+I Sbjct: 545 TKYEGYIEKSLQQVDRMKKMENKKIPVDIDYDAISSLASEARQKLKDVRPLSMGQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 605 GVNPADVSILLVYIEQGKI 623 >gi|294638360|ref|ZP_06716613.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Edwardsiella tarda ATCC 23685] gi|291088613|gb|EFE21174.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Edwardsiella tarda ATCC 23685] Length = 629 Score = 814 bits (2103), Expect = 0.0, Method: Composition-based stats. Identities = 288/618 (46%), Positives = 389/618 (62%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMASARMGRQTLLLTHNIDTLGHMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D GIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAQAIDKGGIQFRILNGSKGPAVRATRAQADRVLYRQAVRMALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + Q R VVLT GTFL G IHIG GR GD PS L + Sbjct: 127 DLIVENDRVVGAITQMGLKFRAKAVVLTVGTFLNGKIHIGLENYSGGRAGDPPSIGLAHR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP RLD +TI +Q D FSF+ D + RQ+ C IT Sbjct: 187 LRELPLRVNRLKTGTPPRLDARTIDLAALAQQHGDNPAPVFSFLGDASQHPRQLPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNERTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q +R++ G++ I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMAIVRSMDGMQNARIVRPGYAIEYDFFDPRDLKPTLESKYIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+ R + +L+ R +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAGRCAAELEGWAPRRDQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLTPIG +LG + + R F + ++ R L+ + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTPIGRELGLVDDERWAHFNRKLENMERERQRLRDTWVH 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 + + +I+ + + L P+ L S+ P A E+++I+ Sbjct: 487 PQAEQAATINALLKTPLSREANGEDLLRRPEMDYAALTSLAPFAPPLEDRQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P D DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYQGYIARQQDEIEKQMRNEHTLLPADLDYRQVNGLSNEVIAKLNDHKPSSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LL+++KK + Sbjct: 607 ITPAAISILLVWLKKQGM 624 >gi|212637844|ref|YP_002314369.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shewanella piezotolerans WP3] gi|226704797|sp|B8CVV6|MNMG_SHEPW RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|212559328|gb|ACJ31782.1| Glucose-inhibited division protein A subfamily [Shewanella piezotolerans WP3] Length = 629 Score = 814 bits (2103), Expect = 0.0, Method: Composition-based stats. Identities = 289/622 (46%), Positives = 383/622 (61%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +DVIV+GGGHAG EAA +A++G+ T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 FHERFDVIVVGGGHAGTEAALASARMGSKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M D AGIQFR LN KGPAVR R QADR LYR +Q + Q NL + Q Sbjct: 63 IDALGGAMAIATDYAGIQFRTLNSSKGPAVRATRAQADRALYRHKIQEILQHQPNLRIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E + +V Q VVLTTGTFL G IHIG GR GD P+ + Sbjct: 123 QAVDDLVVENETVVGVVTQMGLAFEAPAVVLTTGTFLSGKIHIGLENYSGGRAGDPPAIA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIEC 240 L + + GRLKTGTP R+D TI + K +Q D+ L SF+ D + Q+ C Sbjct: 183 LAHRLQELPIRVGRLKTGTPPRIDANTIDFSKMTEQKGDDPLPVMSFIGDVNQHPEQVSC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN TH II + S +YSG I+ GPRYCPSIEDKI RF ++N HQIF+EPEGL Sbjct: 243 HITHTNERTHDIIRAGLDRSPMYSGVIEGIGPRYCPSIEDKINRFADKNSHQIFIEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 NT +YPNGIST+LP ++Q +R+I G+E I+RPGYAIEYDY +P++L +LETK I Sbjct: 303 NTTEIYPNGISTSLPFDVQLNLVRSIKGMENAEIMRPGYAIEYDYFDPRDLKNSLETKTI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 +GLF AGQINGTTGYEEA AQGL+AG+N++ + + C R +Y+GV++DDL++ G Sbjct: 363 NGLFFAGQINGTTGYEEAGAQGLLAGMNASLQIQGKETWCPRRDQAYLGVLVDDLSTLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT G +LG + + R +F+ ++ L+S Sbjct: 423 KEPYRMFTSRAEYRLLLREDNADLRLTEKGRELGLVDDERWAKFSDKMESIETELQRLRS 482 Query: 481 LVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VIERL 536 + ++ ++ + T + L P+ L SI E++ Sbjct: 483 QWIHPRSPLVDVLNPHLKTPIAREATFEDLLRRPELDYPTLMSIDGFGPGIDDQRAAEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 QI+ Y+ Y RQ E + E +P D DY +P LSNE+ K++ KP + QAS Sbjct: 543 QIQVKYSGYIQRQQDEIDKAIRHETTGLPLDLDYQEVPGLSNEVIAKMNEHKPETVGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I GMTPAA+++LL+++KK + Sbjct: 603 RISGMTPAAISILLVHLKKRGL 624 >gi|190569302|ref|ZP_03022196.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis Tsiankovskii-I] gi|190559609|gb|EDV13600.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus anthracis Tsiankovskii-I] Length = 629 Score = 814 bits (2103), Expect = 0.0, Method: Composition-based stats. Identities = 283/619 (45%), Positives = 391/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGP VR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPTVRALRAQADKFSYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEDGECKGVITQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVILGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G ++G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEVGHEIGLITEERYERFTNKKLQIEQEKERLSSIIIK 486 Query: 485 S-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + + S +DG A + L P+ + +++ + P + S V E+++I+ Sbjct: 487 PRPEVQELIRNIGGSELKDGIR--ASDLLRRPEMTYEHIHLLVPSEVELSDEVKEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS+I Sbjct: 545 IKYEGYIEKSLQQVERMKKMENKKIPVDIDYDAISSLASEARQKLKDVRPLSMGQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 605 GVNPADISILLVYIEQGKI 623 >gi|127514781|ref|YP_001095978.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shewanella loihica PV-4] gi|166200613|sp|A3QJS1|MNMG_SHELP RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|126640076|gb|ABO25719.1| glucose inhibited division protein A [Shewanella loihica PV-4] Length = 629 Score = 814 bits (2102), Expect = 0.0, Method: Composition-based stats. Identities = 292/622 (46%), Positives = 387/622 (62%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +DVIV+GGGHAG EAA +A++G+ T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 FHERFDVIVVGGGHAGTEAALASARMGSKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M D AGIQFR LN KGPAVR R QADR LYR +Q+ + +Q NL + Q Sbjct: 63 IDALGGAMAVATDHAGIQFRTLNSSKGPAVRATRAQADRALYRAKIQQILQNQPNLRLFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V + + +V Q +VLT GTFL G IHIG GR GD PS S Sbjct: 123 QAVDDLIVGNDRVIGVVTQMGLAFEAPAIVLTAGTFLSGKIHIGLENYSGGRAGDPPSIS 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIEC 240 L + + GRLKTGTP R+D TI +D +Q D+ L SF+ D K +QI C Sbjct: 183 LADRLRELPIRVGRLKTGTPPRIDANTINFDLMTEQKGDDPLPVMSFIGDVKDHPKQISC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN TH II + S +YSG I+ GPRYCPSIEDKI RF +++ HQIF+EPEGL Sbjct: 243 FITHTNERTHDIIRGGLDRSPMYSGVIEGIGPRYCPSIEDKINRFADKSSHQIFIEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 NT+ +YPNGIST+LP ++Q +R+I G+E IIRPGYAIEYDY +P++L +LETK I Sbjct: 303 NTNEIYPNGISTSLPFDVQLNLVRSIQGMENAEIIRPGYAIEYDYFDPRDLKNSLETKAI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 SGLF AGQINGTTGYEEA AQGL+AG+N++ + + C R ++Y+GV++DDL++ G Sbjct: 363 SGLFFAGQINGTTGYEEAGAQGLLAGMNASLQVQGKEAWCPRRDEAYLGVLVDDLSTLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT G +LG + + R +F + L+S Sbjct: 423 KEPYRMFTSRAEYRLLLREDNADLRLTEKGRELGLVDDDRWAKFNAKREAIELELQRLRS 482 Query: 481 LVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 + + +++ + T E L P+ L S+ E++ Sbjct: 483 QWIHPNSPLVDALNPHLNTPITREATFEELLRRPELDYPKLMSVEGFGPAIEDQRAAEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 QI+ Y+ Y RQ E + EK +P+D DY +P LSNE+ KL+ KP + QAS Sbjct: 543 QIQVKYSGYIQRQQDEIDKAIRHEKTGLPQDLDYQEVPGLSNEVIAKLNDHKPDTVGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA+++LL+++KK + Sbjct: 603 RISGITPAAISILLVHLKKRGL 624 >gi|300719171|ref|YP_003743974.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme, glucose-inhibited division protein A [Erwinia billingiae Eb661] gi|299065007|emb|CAX62127.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme, Glucose-inhibited division protein A [Erwinia billingiae Eb661] Length = 629 Score = 814 bits (2102), Expect = 0.0, Method: Composition-based stats. Identities = 294/618 (47%), Positives = 388/618 (62%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIVIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAHAIDRAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R +VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKSVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLARR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + RLKTGTP R+D +TI + + Q D + FSFM + + Q + C IT Sbjct: 187 LRELPLRVSRLKTGTPPRIDARTIDFSVLDPQHGDTPMPVFSFMGNVSQHPQQVPCYITY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH +I N+ S +YSG I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNENTHEVIRNNLDRSPMYSGVIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ GLE I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQIQIVRSMKGLENAKIVRPGYAIEYDFFDPRDLKPTLESKHIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+ R S + R +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAGRLSADKETWAPRRDQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R RF + ++ R L+ + + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEAGRELGLVDDARWARFNEKLESIEKERQRLRDIWVH 486 Query: 485 SKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 K+ + K + + L P+ + Q L ++ A E+++I+ Sbjct: 487 PKSDSVEEVNGVLSAALTKEASGEDLLRRPEMTYQQLMTLSTFAPALADPQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E + E L+P + DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQEEINRQQRNENTLLPAELDYHQVSGLSNEVIAKLNDHKPGSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LLIY+KK + Sbjct: 607 ITPAAISILLIYLKKQGL 624 >gi|229035141|ref|ZP_04189087.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus AH1271] gi|228728207|gb|EEL79237.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus AH1271] Length = 629 Score = 814 bits (2102), Expect = 0.0, Method: Composition-based stats. Identities = 284/619 (45%), Positives = 393/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G++T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSNTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEDGECKGVITQSGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVILGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G ++G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEVGREIGLIKEERYERFTNKKLQIEQEKERLSSIIIK 486 Query: 485 S-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + S S +DG A + L P+ + +++ + P + S V E+++I+ Sbjct: 487 PRPEVQELIRSIGGSELKDGIR--ASDLLRRPEMTYEHIHLLVPSEVELSDEVTEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + + +K E + IP D DY ++ ++++E ++KL ++P ++ QAS+I Sbjct: 545 IKYEGYIEKSLQQVERMKKMENKKIPVDIDYDAISSIASEARQKLKDVRPLSMGQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 605 GVNPADVSILLVYIEQGKI 623 >gi|327395840|dbj|BAK13262.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pantoea ananatis AJ13355] Length = 629 Score = 814 bits (2102), Expect = 0.0, Method: Composition-based stats. Identities = 292/624 (46%), Positives = 390/624 (62%), Gaps = 6/624 (0%) Query: 1 MINRS-YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLV 59 M + +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV Sbjct: 1 MFYQDPFDVIVIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLV 60 Query: 60 REIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDV 119 +E+DAL GLM D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Sbjct: 61 KEVDALGGLMAGAIDRAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMI 120 Query: 120 IQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 Q V E + + V Q R TVVLT GTFL G IHIG GR GD PS Sbjct: 121 FQQAVDDLIVENDRVVGAVTQMGLKFRAKTVVLTVGTFLDGKIHIGLDNYSGGRAGDPPS 180 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-I 238 L RLKTGTP R+D ++I + Q D + FSFM + + Q + Sbjct: 181 IPLAKRLRALPLRVDRLKTGTPPRIDARSIDFSVLAPQHGDNPMPVFSFMGNAGQHPQQV 240 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C +T TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPE Sbjct: 241 PCWMTYTNEKTHDVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNSHQIFLEPE 300 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL ++ +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L TLE+K Sbjct: 301 GLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKLTLESK 360 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I GLF AGQINGTTGYEEAAAQGL+AG+N+AR+S + R +Y+GV++DDL + Sbjct: 361 FIDGLFFAGQINGTTGYEEAAAQGLLAGLNAARQSADKEGWAPRRDQAYLGVLVDDLCTL 420 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYRMFTSRAEYR+ LR DNAD RLT G +LG + + R RF + ++ R L Sbjct: 421 GTKEPYRMFTSRAEYRLMLREDNADLRLTETGRELGLVDDARWARFNQKLEAIEQERQRL 480 Query: 479 KSLVLTSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIE 534 + + + K+ + +I+ K +A + L P+ + L ++ E Sbjct: 481 RDIWVHPKSEHVEAVNTITSSPLTKEASAEDLLRRPEMTYLKLMALDAFGPALADEQAAE 540 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E E L+P DY + LSNE+ KL+ KP ++ Q Sbjct: 541 QVEIQVKYEGYIARQQEEIDRQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPVSIGQ 600 Query: 595 ASKIEGMTPAALNLLLIYIKKNTV 618 AS+I G+TPAA+++LLIY+KK + Sbjct: 601 ASRISGVTPAAISILLIYLKKQGL 624 >gi|260774973|ref|ZP_05883873.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio coralliilyticus ATCC BAA-450] gi|260609063|gb|EEX35222.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio coralliilyticus ATCC BAA-450] Length = 631 Score = 814 bits (2102), Expect = 0.0, Method: Composition-based stats. Identities = 286/623 (45%), Positives = 391/623 (62%), Gaps = 5/623 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + +DVIV+GGGHAG EAA +A+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHEKFDVIVVGGGHAGTEAALASARTGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVREALENAPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E++ +V Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQSVDDLIVEQDRAVGVVTQMGLRFHAKAVVLTVGTFLGGKIHIGMESSSGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D +++ + + E Q D FSFM + + RQI Sbjct: 182 ALADRLRELPFRVDRLKTGTPPRIDARSVDFSQLEAQHGDNPTPVFSFMGQRTQHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CFITHTNDQTHEVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 LNT +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LNTHELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I+GLF AGQINGTTGYEEAAAQGL+AG+N++ S D R +Y+GV+IDDL++ G Sbjct: 362 INGLFFAGQINGTTGYEEAAAQGLMAGLNASLYSQDKDGWSPRRDQAYVGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG I + R RF + I R LK Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEQARELGLIDDLRWARFNEKIDNMTKERQRLK 481 Query: 480 SLVLTSKN--LSSTSISFKQD-GKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIER 535 + K+ + + + K + + + L P+ + Q L + A E+ Sbjct: 482 DTWMNPKSQGIDALNQLLKTPMVREASGEDLLRRPEMTYQQLTELEAFAPALADQQAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y RQ E ++ E +P D DY+++ LSNE+ KL+ KP ++ A Sbjct: 542 VEIQVKYEGYIKRQQDEIEKSLRHEHTHLPLDMDYANVKGLSNEVVAKLNESKPESIGIA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV 618 S+I G+TPAA+++LL+++KK + Sbjct: 602 SRISGITPAAISILLVHLKKQGM 624 >gi|110835598|ref|YP_694457.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Alcanivorax borkumensis SK2] gi|122959208|sp|Q0VKW3|MNMG_ALCBS RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|110648709|emb|CAL18185.1| glucose-inhibited division protein A [Alcanivorax borkumensis SK2] Length = 631 Score = 813 bits (2101), Expect = 0.0, Method: Composition-based stats. Identities = 297/625 (47%), Positives = 393/625 (62%), Gaps = 4/625 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 ++ + VIVIGGGHAG EAA +A++G ST L+TH T+G MSCNPAIGG+GK HLVRE Sbjct: 3 FSQRFGVIVIGGGHAGTEAALASARMGVSTLLLTHNIETLGQMSCNPAIGGIGKSHLVRE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G MGR D GIQFRVLN +KGPAVR R QADRELY+ A++ + +Q NL + Q Sbjct: 63 IDALGGAMGRATDKGGIQFRVLNARKGPAVRATRAQADRELYKAAIRGTLENQPNLTLFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E +V VVLT GTFL GVIHIG GR GD PSN+ Sbjct: 123 QAVDDLVVENGRCVGVVTNMGLRFMADAVVLTAGTFLGGVIHIGLDNHQGGRAGDQPSNA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IEC 240 L + F RLKTGTP R+DGK++ + E+Q+ D L S++ + Q + C Sbjct: 183 LACRLRELPFRVDRLKTGTPPRIDGKSVDFSVMEEQWGDNPLPVMSYLGKVEEHPQQVCC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH II S +++G I GPRYCPSIEDK+ R+ +++ HQIF+EPEGL Sbjct: 243 YITHTNAQTHDIIRSGFDRSPMFTGVIDGVGPRYCPSIEDKVNRYPDKDSHQIFVEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 NT +YPNGIST+LP ++Q Q +R+I G E +I RPGYAIEYDY NP++L +LET+ + Sbjct: 303 NTHELYPNGISTSLPFDVQLQAVRSIRGFENAHITRPGYAIEYDYFNPQDLKHSLETQHM 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQINGTTGYEEA AQGL+AG+N+AR S D R ++YIGV++DDL + G Sbjct: 363 PGLFFAGQINGTTGYEEAGAQGLLAGLNAARLSQGKDAWTPRRDEAYIGVLVDDLITMGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT G +LG +G+ R F LK+ Sbjct: 423 QEPYRMFTSRAEYRLLLREDNADLRLTEKGRELGLVGDERWAAFNAKRDGMASEEQRLKT 482 Query: 481 LVLTSKNLSSTSIS---FKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 + K + +++ K + L P+ + NL A + S VIE+++ Sbjct: 483 TWVRPKTPEAEAVNALIEKPLTHEYNLLDLLKRPELTYANLAEAVALADRPDSAVIEQME 542 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I + YA Y RQ E ++++ E +P +FDY + LSNE+K+KLS ++P L QA + Sbjct: 543 ILAKYAGYIDRQADEIEKLRAAETTALPVEFDYGQVKGLSNEVKQKLSEIRPQTLGQAGR 602 Query: 598 IEGMTPAALNLLLIYIKKNTVKLNE 622 I G+TPAA++LL+IY+KK+ + Sbjct: 603 IPGVTPAAISLLMIYLKKHHHQKKA 627 >gi|229130729|ref|ZP_04259682.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus BDRD-Cer4] gi|228652746|gb|EEL08631.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus BDRD-Cer4] Length = 629 Score = 813 bits (2101), Expect = 0.0, Method: Composition-based stats. Identities = 285/619 (46%), Positives = 394/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFAYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E+ + +V Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEEGVCKGVVTQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVVLGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G ++G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEVGREIGLIKEERYERFTNKKLQIEQEKERLSSIIIK 486 Query: 485 S-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + + S +DG A + L P+ + +++ + P + S V E+++I+ Sbjct: 487 PRPEVQELIRNIGGSELKDGIR--ASDLLRRPEMAYEHIHLLVPSEVELSDEVKEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS+I Sbjct: 545 IKYEGYIEKSLQQVERMKKMESKKIPVDIDYDAISSLASEARQKLKDVRPLSMGQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 605 GVNPADISILLVYIEQGKI 623 >gi|30023507|ref|NP_835138.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus cereus ATCC 14579] gi|38372296|sp|Q814F7|MNMG_BACCR RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|29899068|gb|AAP12339.1| Glucose inhibited division protein A [Bacillus cereus ATCC 14579] Length = 629 Score = 813 bits (2101), Expect = 0.0, Method: Composition-based stats. Identities = 285/619 (46%), Positives = 394/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFAYQHELKKTIEETPNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E+ + +V Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEEGVCKGVVTQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVVLGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G ++G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEVGREIGLIKEERYERFTNKKLQIEQEKERLSSIIIK 486 Query: 485 S-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + + S +DG A + L P+ + +++ + P + S V E+++I+ Sbjct: 487 PRPEVQELIRNIGGSELKDGIR--ASDLLRRPEMAYEHIHLLVPSEVELSDEVKEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS+I Sbjct: 545 IKYEGYIEKSLQQVERMKKMESKKIPVDIDYDAISSLASEARQKLKDVRPLSMGQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 605 GVNPADISILLVYIEQGKI 623 >gi|329298811|ref|ZP_08256147.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Plautia stali symbiont] Length = 628 Score = 813 bits (2101), Expect = 0.0, Method: Composition-based stats. Identities = 298/617 (48%), Positives = 388/617 (62%), Gaps = 4/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIVIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMASAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + I V Q R TVVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRIVGAVTQMGLKFRAKTVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLAKR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 RLKTGTP R+D +TI + Q D+ + FSFM + Q + C IT Sbjct: 187 LRALPLRVNRLKTGTPPRIDARTIDFSVLTPQHGDDPMPVFSFMGYAGQHPQQVPCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNELTHEVIHNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ GLE I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMKGLENAKIVRPGYAIEYDFFDPRDLKPTLESKFIHGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL AG+N+AR+S + R +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLQAGLNAARQSADKEGWAARRDQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R R+ + ++ R L+ L + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTETGRELGLVDDARWARYNQKLEAIEQERQRLRDLWVH 486 Query: 485 SK--NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIESS 541 K N+S + K +A + L P+ + + L + E+++I+ Sbjct: 487 PKSENVSEVNTVISALTKEASAEDLLRRPEMTYELLMLLPSYGPALADEQAAEQVEIQVK 546 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y RQ E + E L+P D DY + LSNE+ KL+ KP ++ QAS+I G+ Sbjct: 547 YEGYIARQQEEIDRQQRNENTLLPADLDYRQVNGLSNEVIAKLNDHKPTSIGQASRISGI 606 Query: 602 TPAALNLLLIYIKKNTV 618 TPAA+++LLIY+KK + Sbjct: 607 TPAAISILLIYLKKQGL 623 >gi|229014649|ref|ZP_04171763.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus mycoides DSM 2048] gi|228746660|gb|EEL96549.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus mycoides DSM 2048] Length = 629 Score = 813 bits (2101), Expect = 0.0, Method: Composition-based stats. Identities = 285/619 (46%), Positives = 393/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLFQGLV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIIEDGVCKGVITQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRAMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVILGRADAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G ++G I E R +RF + + L+S+ + Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEVGREIGLIKEDRYERFTNKKLQIEQEKERLESIFIK 486 Query: 485 S-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + S S +DG A + L P+ + +++ + P S + E+++I+ Sbjct: 487 PRPEVQELIRSIGGSELKDGIR--ASDLLRRPEVTYEHIHLLVPSEVPLSDEITEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS+I Sbjct: 545 TKYEGYIEKSLQQVERMKKMENKKIPVDIDYDAISSLASEARQKLKDVRPLSMGQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LLIYI++ + Sbjct: 605 GVNPADVSILLIYIEQGKI 623 >gi|163943163|ref|YP_001648047.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus weihenstephanensis KBAB4] gi|229136308|ref|ZP_04265055.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus BDRD-ST196] gi|229170186|ref|ZP_04297872.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus AH621] gi|205831488|sp|A9VTL9|MNMG_BACWK RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|163865360|gb|ABY46419.1| glucose inhibited division protein A [Bacillus weihenstephanensis KBAB4] gi|228613287|gb|EEK70426.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus AH621] gi|228647180|gb|EEL03268.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus BDRD-ST196] Length = 629 Score = 813 bits (2101), Expect = 0.0, Method: Composition-based stats. Identities = 285/619 (46%), Positives = 393/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLFQGLV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIIEDGVCKGVITQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQRAMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVILGRADAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G ++G I E R +RF + + L+S+ + Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEVGREIGLIKEDRYERFTNKKLQIEQEKERLESIFIK 486 Query: 485 S-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + S S +DG A + L P+ + +++ + P S + E+++I+ Sbjct: 487 PRPEVQELIRSIGGSELKDGIR--ASDLLRRPEVTYEHIHLLVPSEVALSDEITEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS+I Sbjct: 545 TKYEGYIEKSLQQVERMKKMENKKIPVDIDYDAISSLASEARQKLKDVRPLSMGQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LLIYI++ + Sbjct: 605 GVNPADVSILLIYIEQGKI 623 >gi|161505600|ref|YP_001572712.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|189039354|sp|A9MJQ9|MNMG_SALAR RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|160866947|gb|ABX23570.1| hypothetical protein SARI_03776 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 629 Score = 813 bits (2100), Expect = 0.0, Method: Composition-based stats. Identities = 292/618 (47%), Positives = 391/618 (63%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMAAAIDRAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMLFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + RLKTGTP R+D +TI + +Q D + FSFM + + Q + C IT Sbjct: 187 LRELPLRVSRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFSDRNQHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR S + +R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG LG + + R RF + ++ R LKS +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEIGRDLGLVDDERWARFNEKLENIERERQRLKSTWVT 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 + ++ + + + L P+ + L S+ A E+++I+ Sbjct: 487 PSAEFAADVNAHLTTPLSREASGEDLLRRPEMTYAQLTSLSAFAPALEDEQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQLRNENTLLPATLDYRLVSGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LL+++KK + Sbjct: 607 VTPAAISILLVWLKKQGM 624 >gi|312876170|ref|ZP_07736157.1| glucose inhibited division protein A [Caldicellulosiruptor lactoaceticus 6A] gi|311796985|gb|EFR13327.1| glucose inhibited division protein A [Caldicellulosiruptor lactoaceticus 6A] Length = 632 Score = 813 bits (2100), Expect = 0.0, Method: Composition-based stats. Identities = 277/614 (45%), Positives = 387/614 (63%), Gaps = 4/614 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDV V+G GHAG EAA +A+LG T + +IG+M CNP+IGG GKGHLVREIDA Sbjct: 11 EYDVAVVGAGHAGIEAALASARLGLKTIIFAINLDSIGNMPCNPSIGGTGKGHLVREIDA 70 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ ADA IQ R+LN KGPAV R Q DR YRL M+R + +QENLD+ QGEV Sbjct: 71 LGGEMGKAADATAIQVRILNRAKGPAVYSLRAQCDRSRYRLYMKRVLENQENLDIRQGEV 130 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + + ++ VVL TGTFL G + IG+ +G G P+ L Sbjct: 131 CEIIVEDGRVKGVKITTGAIFLAKAVVLATGTFLGGRVIIGETVYDSGPDGMHPARYLTE 190 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNRQIECGIT 243 + K + R KTGTPAR+ +++ + K + Q DE+ +PFSF D Q+ C +T Sbjct: 191 NLKKLGIEMMRFKTGTPARVHRRSLDFSKMQIQPGDEKPLPFSFENEDNFNIDQVPCYLT 250 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 T ETHRII EN+ + +++G I GPRYCPSIEDK+VRF ++ HQ+F+EP GL+TD Sbjct: 251 YTTEETHRIIRENLHRAPLFTGLISGIGPRYCPSIEDKVVRFADKPRHQVFIEPTGLDTD 310 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G+ST+LPE++Q + R++ GLE V I+RP YAIEYD INP +L PTL+ KKI GL Sbjct: 311 EMYVQGMSTSLPEDVQVKMYRSVIGLENVKIMRPAYAIEYDCINPLQLEPTLQFKKIKGL 370 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGT+GYEEAAAQG++AGIN+A + + R+ +YIGV+IDDL +KG EP Sbjct: 371 FSAGQINGTSGYEEAAAQGIIAGINAAMYVKGKEMLILDRSQAYIGVLIDDLVTKGTNEP 430 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT IG K+G I ++R ++F + + + +K+ V+ Sbjct: 431 YRIMTSRAEYRLILRQDNADLRLTEIGYKIGLISQQRYEKFLQKKKMIEDEINRVKNTVI 490 Query: 484 TSKNLSSTSISFKQDGKTRT---AYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + + K T + L P+ S ++L I P V + ++IE Sbjct: 491 APSEKVNKFLQEKGSSPITTGVKLSDLLKRPELSYEDLKEIDPARPDLPWYVQDEVEIEI 550 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y +Q+ + ++ K E + IP+ DYS + LS E K+KLS ++P ++ QAS+I G Sbjct: 551 KYEGYIKKQLAQIEQFKKLENKKIPEWVDYSQILGLSTEAKQKLSQIRPASIGQASRISG 610 Query: 601 MTPAALNLLLIYIK 614 ++PA +++LLI+++ Sbjct: 611 VSPADISVLLIWLE 624 >gi|90023652|ref|YP_529479.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Saccharophagus degradans 2-40] gi|123395363|sp|Q21DG2|MNMG_SACD2 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|89953252|gb|ABD83267.1| glucose inhibited division protein A [Saccharophagus degradans 2-40] Length = 630 Score = 813 bits (2100), Expect = 0.0, Method: Composition-based stats. Identities = 288/626 (46%), Positives = 394/626 (62%), Gaps = 5/626 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDVIVIGGGHAG EA AA++G T L+TH T+G MSCNPAIGG+GK HLV+EIDA Sbjct: 6 QYDVIVIGGGHAGTEACLAAARMGCKTLLLTHNIETLGQMSCNPAIGGIGKSHLVKEIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D GIQFR+LN +KGPAVR R QADR LY+ A++ + +Q NLD+ Q Sbjct: 66 LGGAMALATDKGGIQFRILNSRKGPAVRATRAQADRALYKAAVREILENQPNLDIFQQAA 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ + Q + TVVLT GTFL G IHIG GR GD PS +L + Sbjct: 126 DDLVVEGERVTGVTTQMGVTFKAPTVVLTAGTFLGGKIHIGMENHSGGRAGDPPSIALAS 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGIT 243 + RLKTGTP R+D +++ +D EKQ+ +E+ S+M Q C IT Sbjct: 186 RLRELPLRVDRLKTGTPPRIDARSVNFDGLEKQWGEEKTPVMSYMGSLADHPEQTCCWIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH I S +++G I+ GPRYCPSIEDK+ RF +++ HQIF+EPEGL T Sbjct: 246 HTNAQTHDFIRSGFDRSPMFTGVIEGVGPRYCPSIEDKVNRFADKDSHQIFIEPEGLKTH 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q F+R+I G E +I RPGYAIEYD+ +P++L + ETK I GL Sbjct: 306 ELYPNGISTSLPFDVQMAFVRSIKGFENAHITRPGYAIEYDFFDPRDLKYSFETKHIEGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEA AQGL+AG+N+A K+ + C R ++YIGV+ DDL S G EP Sbjct: 366 FFAGQINGTTGYEEAGAQGLLAGLNAALKAQGKEAWCPRRDEAYIGVLADDLISMGTREP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT G +LG + + R + F K + +++ + Sbjct: 426 YRMFTSRAEYRLLLREDNADMRLTEKGRELGLVDDARWQAFCKKREAIELETQRMRTTWI 485 Query: 484 TSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + + +++ K + + + + L P+ + +L S+ +A V E+++I + Sbjct: 486 QPNSAEANALAAKMPAELAREYSLLDLLKRPELTYDDLGSLKGEAVS-DPQVAEQVEINT 544 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 YA Y RQ + + ++ E +IP +FDY S+ LSNELK+KLS +P L +AS+I G Sbjct: 545 KYAGYINRQTDDIERMRQHENTVIPVEFDYMSVEGLSNELKQKLSEARPETLSRASRIPG 604 Query: 601 MTPAALNLLLIYIKKNTVKLNEIVLV 626 +TPAA++L+LIY+KK + N+ L Sbjct: 605 VTPAAVSLILIYLKKRGLLKNKAALA 630 >gi|229106077|ref|ZP_04236690.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus Rock3-28] gi|228677343|gb|EEL31607.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus Rock3-28] Length = 629 Score = 813 bits (2100), Expect = 0.0, Method: Composition-based stats. Identities = 284/619 (45%), Positives = 393/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETTNLTLFQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEDGVCKGVITQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSTETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETK I L+ Sbjct: 307 VYVQGLSTSLPEDVQRDMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKNIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVILGREDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G ++G I E R +RF + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEVGREIGLIKEERYERFTNKKLQIEQEKERLGSIIIK 486 Query: 485 S-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + S S +DG A + L P+ + +++ + P + S V E+++I+ Sbjct: 487 PRPEVQELIRSIGGSELKDGIR--ASDLLRRPEMTYEHIHLLVPSEVELSDEVTEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS+I Sbjct: 545 TKYEGYIEKSLQQVERMKKMENKKIPVDIDYDAISSLASEARQKLKDVRPLSMGQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 605 GVNPADISILLVYIEQGKI 623 >gi|156936121|ref|YP_001440037.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cronobacter sakazakii ATCC BAA-894] gi|205831508|sp|A7MMW3|MNMG_ENTS8 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|156534375|gb|ABU79201.1| hypothetical protein ESA_04015 [Cronobacter sakazakii ATCC BAA-894] Length = 629 Score = 813 bits (2100), Expect = 0.0, Method: Composition-based stats. Identities = 289/618 (46%), Positives = 394/618 (63%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYKQAVRTALENQPNLMIFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSVPLARR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +TI + ++Q D + FSFM + RQ+ C +T Sbjct: 187 LRELPLRVSRLKTGTPPRIDARTIDFSVLDQQHGDNPMPVFSFMGSADQHPRQVPCYVTH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMKGMENAKIVRPGYAIEYDFFDPRDLKPTLESKYIHGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+ R S + + R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAGRYSAEKEGWAPGRSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT +G ++G + + R RF + ++ R L+S +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEVGREMGLVDDARWARFNEKLENIERERQRLRSTWVT 486 Query: 485 SKNLSSTSIS---FKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 S I+ + + + L P+ + L S+ A E+++I+ Sbjct: 487 PSTASVEEINTMLTAPLSREASGEDLLRRPEMTYAQLTSLSAFAPALDDAQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ + E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQQRNENTLLPATLDYRQVNGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LL+++KK + Sbjct: 607 ITPAAISILLVWLKKQGL 624 >gi|260595793|ref|YP_003208364.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cronobacter turicensis z3032] gi|260214970|emb|CBA26596.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Cronobacter turicensis z3032] Length = 629 Score = 813 bits (2099), Expect = 0.0, Method: Composition-based stats. Identities = 288/618 (46%), Positives = 393/618 (63%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLM + D AGIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 67 GGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYKQAVRTALENQPNLMIFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSVPLARR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + RLKTGTP R+D +TI + ++Q D + FSFM + RQ+ C +T Sbjct: 187 LRELPLRVSRLKTGTPPRIDARTIDFSVLDQQHGDNPMPVFSFMGSADQHPRQVPCYVTH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMKGMENAKIVRPGYAIEYDFFDPRDLKPTLESKYIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+ R S + + R+ +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAGRYSAEKEGWAPGRSQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G ++G + + R RF + ++ R L+S +T Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEAGREMGLVDDARWARFNEKLENIERERQRLRSTWVT 486 Query: 485 SKNLSSTSIS---FKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIES 540 S I+ + + + L P+ + L ++ A E+++I+ Sbjct: 487 PSTASVEEINTVLTAPLSREASGEDLLRRPEMTYAQLTALSVFAPALDDVQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E ++ + E L+P DY + LSNE+ KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQDEIEKQQRNESTLLPATLDYRQVNGLSNEVIAKLNDHKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LL+++KK + Sbjct: 607 ITPAAISILLVWLKKQGL 624 >gi|283836165|ref|ZP_06355906.1| hypothetical protein CIT292_10591 [Citrobacter youngae ATCC 29220] gi|291068359|gb|EFE06468.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Citrobacter youngae ATCC 29220] Length = 629 Score = 813 bits (2099), Expect = 0.0, Method: Composition-based stats. Identities = 295/624 (47%), Positives = 396/624 (63%), Gaps = 6/624 (0%) Query: 1 MINRS-YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLV 59 M + +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV Sbjct: 1 MFYQDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLV 60 Query: 60 REIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDV 119 +E+DAL GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Sbjct: 61 KEVDALGGLMAKAIDHAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMI 120 Query: 120 IQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 Q V E + + V Q R VVLT GTFL G IHIG GR GD PS Sbjct: 121 FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPS 180 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQI 238 L + RLKTGTP R+D +TI + +Q +D + FSF+ D + RQ+ Sbjct: 181 IPLSRRLRELPLRVSRLKTGTPPRIDARTIDFSVLSQQNSDNPMPVFSFLGDVAQHPRQM 240 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPE Sbjct: 241 PCYITHTNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQIFLEPE 300 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL ++ +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K Sbjct: 301 GLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENARIVRPGYAIEYDFFDPRDLKPTLESK 360 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I GLF AGQINGTTGYEEAAAQG++AG+N+AR S + D R +Y+GV++DDL + Sbjct: 361 FIQGLFFAGQINGTTGYEEAAAQGMLAGLNAARLSAEKDGWAPRRDQAYLGVLVDDLCTL 420 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYRMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R L Sbjct: 421 GTKEPYRMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLERIEQERQRL 480 Query: 479 KSLVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIE 534 KS + S+ ++ + + + L PD + L S+ A E Sbjct: 481 KSTWVNPLAESAAEVNAHLATPLSREASGEDLLRRPDMTYAQLTSLSAFAPALDDAQAAE 540 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E + + E L+P DY + LSNE+ KL+ KP ++ Q Sbjct: 541 QVEIQVKYEGYIARQQEEIERQQRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPVSIGQ 600 Query: 595 ASKIEGMTPAALNLLLIYIKKNTV 618 AS+I G+TPAA+++LL+++KK + Sbjct: 601 ASRISGVTPAAISILLVWLKKQGM 624 >gi|107024504|ref|YP_622831.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia cenocepacia AU 1054] gi|116688117|ref|YP_833740.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia cenocepacia HI2424] gi|123371037|sp|Q1BR97|MNMG_BURCA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|166222913|sp|A0K2X0|MNMG_BURCH RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|105894693|gb|ABF77858.1| glucose inhibited division protein A [Burkholderia cenocepacia AU 1054] gi|116646206|gb|ABK06847.1| glucose inhibited division protein A [Burkholderia cenocepacia HI2424] Length = 656 Score = 813 bits (2099), Expect = 0.0, Method: Composition-based stats. Identities = 288/633 (45%), Positives = 386/633 (60%), Gaps = 15/633 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+ Sbjct: 2 LFPTEFDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DAL G M D +GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Sbjct: 62 EVDALGGAMAAATDESGIQFRILNSSKGPAVRATRAQADRILYKAAIRHRLENQPNLWLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + + V Q R VVLT GTFL G IH+G GR GD + Sbjct: 122 QQAVDDLMVEGDRVVGAVTQIGIRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAV 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITNRQ-I 238 SL + + GRLKTGTP R+DG+TI + K ++Q D IP FSF+ + Q + Sbjct: 182 SLSSRLKELKLPQGRLKTGTPPRIDGRTIDFSKLDEQPGDLDPIPVFSFLGRADQHPQQL 241 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C +T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPE Sbjct: 242 PCWVTHTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPE 301 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL T YPNGIST+LP ++Q + + ++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 302 GLTTHEFYPNGISTSLPFDVQLELVHSMRGLENAHILRPGYAIEYDYFDPRALKASLETK 361 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I+GLF AGQINGTTGYEEAAAQGL+AG+N+ R + D C R +Y+GV++DDL ++ Sbjct: 362 AINGLFFAGQINGTTGYEEAAAQGLLAGLNAGRYVQEKDAWCPRRDQAYLGVLVDDLVTR 421 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 GV EPYRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F++ + L Sbjct: 422 GVAEPYRMFTSRAEYRLSLREDNADMRLTEIGRELGLVDDARWDAFSRKRDAVSRETERL 481 Query: 479 KSLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNL----------FSICPDA 525 KS +T K L +T++ K + E L P S + D Sbjct: 482 KSTWVTPKTLPVEEATALLGKAIDHEYSLAELLRRPGVSYDGVCGLKGGECGPAEPLADD 541 Query: 526 RKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 + E+++I Y Y RQ E + E +P DY + LS E+ +KL+ Sbjct: 542 PVLLEQIKEQVEIGIKYQGYIERQASEIERNDANENTRLPDGIDYREVRGLSFEVSQKLN 601 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYIKKNTV 618 +P + QAS+I G+TPAA++LL++++K+ + Sbjct: 602 EFRPETIGQASRISGVTPAAISLLMVHLKRRGL 634 >gi|167036428|ref|YP_001671659.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas putida GB-1] gi|189039352|sp|B0KRB9|MNMG_PSEPG RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|166862916|gb|ABZ01324.1| glucose inhibited division protein A [Pseudomonas putida GB-1] Length = 630 Score = 813 bits (2099), Expect = 0.0, Method: Composition-based stats. Identities = 287/617 (46%), Positives = 383/617 (62%), Gaps = 5/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGHMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D +GIQFRVLN +KGPAVR R QADR +Y+ ++ + +Q NL + Q Sbjct: 67 GGAMALATDKSGIQFRVLNNRKGPAVRATRAQADRAIYKAVVREILENQPNLWIFQQSCD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q +VVLTTGTFL G+IHIG GR GD PS +L + Sbjct: 127 DLIVEQDQVKGVVTQMGLRFFAESVVLTTGTFLGGLIHIGLQNHSGGRAGDPPSIALAHR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SFM + ++ RQ+ C IT Sbjct: 187 MRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFMGNAEMHPRQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF +++ HQ+F+EPEGL T Sbjct: 247 TNARTHEIIASNLDRSPMYSGVIEGVGPRYCPSIEDKIHRFADKDSHQVFIEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q + +R+I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLELVRSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG I ++R F LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLIDDQRWAAFCAKRDGIEREEQRLKSTWVR 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +I K + L+ P+ L V E+++I + Sbjct: 487 PNTEQGQAIVDKFGTPLSHEYSLLNLLARPEIDYAGLIEATGG-EAIDPQVAEQVEIRTK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E ++ E +P D DYS++ LS E++ KL +P L QAS+I G+ Sbjct: 546 YAGYIDRQQDEIARLRASEDTRLPVDIDYSTISGLSKEIQGKLGQTRPETLGQASRIPGV 605 Query: 602 TPAALNLLLIYIKKNTV 618 TPAA++LLLI++KK Sbjct: 606 TPAAISLLLIHLKKRGA 622 >gi|90413743|ref|ZP_01221731.1| glucose-inhibited division protein A [Photobacterium profundum 3TCK] gi|90325212|gb|EAS41709.1| glucose-inhibited division protein A [Photobacterium profundum 3TCK] Length = 629 Score = 812 bits (2098), Expect = 0.0, Method: Composition-based stats. Identities = 289/622 (46%), Positives = 393/622 (63%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 ++DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 YQENFDVIVVGGGHAGTEAALAAARMGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DAL GLM + D GIQFR LN KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 63 VDALGGLMAKATDKGGIQFRTLNSSKGPAVRATRAQADRALYKAAVREALENQPNLMLFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E + + +V + R ++VVLT GTFL G IHIG GR GD PS + Sbjct: 123 QAVDDLIVENDRVIGVVTEMGLKFRATSVVLTVGTFLGGKIHIGLENYSGGRAGDPPSIA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIEC 240 L + + F RLKTGTP R+D +T+ + + + Q D + FSFM + RQI C Sbjct: 183 LASRLRELPFRVDRLKTGTPPRIDARTVDFSRLQAQHGDNPIPTFSFMGKTSDHPRQIPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH +I N+ S +YSG I+ GPRYCPSIEDK++RF ++N HQIF+EPEGL Sbjct: 243 YITYTNEKTHDVIRNNLDRSPMYSGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T +YPNGIST+LP ++Q Q +R++ G E I+RPGYAIEYD+ +P++L T ETK I Sbjct: 303 TTHELYPNGISTSLPFDVQIQIVRSMDGFENAAIMRPGYAIEYDFFDPRDLKQTFETKFI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQINGTTGYEEAAAQGL+AG+N+A +S + C R +Y+GV+IDDL++ G Sbjct: 363 DGLFFAGQINGTTGYEEAAAQGLLAGMNAALQSQGKEGWCPRRDQAYMGVLIDDLSTMGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R LK Sbjct: 423 KEPYRMFTSRAEYRLLLREDNADLRLTEIGRELGLVDDDRWARFNQKVENIEQERQRLKD 482 Query: 481 LVLTSKNLSSTSIS---FKQDGKTRTAYEFLSYPDFSIQNLFSICPDARK-FSSLVIERL 536 + + + I+ + + L P+ + + L + + + E++ Sbjct: 483 IWINPNSDHVDEINKILKTPIAREANGEDLLRRPEITYKLLTQLEDFSPAHIDTQASEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 + + Y Y RQ E ++ E +P D DYS + LSNE+ KL+ KP + AS Sbjct: 543 ETQVKYQGYIDRQKDEVEKSLRHETTKLPFDLDYSIVKGLSNEVIAKLTDAKPETIGMAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA++LLL+Y+KK+ + Sbjct: 603 RISGITPAAISLLLVYLKKHGM 624 >gi|312794738|ref|YP_004027661.1| glucose inhibited division protein a [Caldicellulosiruptor kristjanssonii 177R1B] gi|312181878|gb|ADQ42048.1| glucose inhibited division protein A [Caldicellulosiruptor kristjanssonii 177R1B] Length = 639 Score = 812 bits (2098), Expect = 0.0, Method: Composition-based stats. Identities = 277/614 (45%), Positives = 387/614 (63%), Gaps = 4/614 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDV VIG GHAG EAA +A+LG T + +IG+M CNP+IGG GKGHLVREIDA Sbjct: 18 EYDVAVIGAGHAGIEAALASARLGLKTIIFAINLDSIGNMPCNPSIGGTGKGHLVREIDA 77 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ ADA IQ R+LN KGPAV R Q DR YRL M+R + +QENLD+ QGEV Sbjct: 78 LGGEMGKAADATAIQVRILNRAKGPAVYSLRAQCDRSRYRLYMKRVLENQENLDIRQGEV 137 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + + ++ VVL TGTFL G + IG+ +G G P+ L Sbjct: 138 CEIIVEDGRVKGVKITTGAIFLAKAVVLATGTFLGGKVIIGETVYDSGPDGMHPARYLTE 197 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNRQIECGIT 243 + K + R KTGTPAR+ +++ + K + Q DE+ +PFSF D Q+ C +T Sbjct: 198 NLKKLGIEMMRFKTGTPARVHRRSLDFSKMQIQPGDEKPLPFSFENEDNFNIVQVPCYLT 257 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 T ETHRII EN+ + +++G I GPRYCPSIEDK+VRF ++ HQ+F+EP GL+TD Sbjct: 258 YTTEETHRIIRENLHRAPLFTGLISGIGPRYCPSIEDKVVRFADKPRHQVFIEPTGLDTD 317 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G+ST+LPE++Q + R++ GLE V I+RP YAIEYD INP +L PTL+ KKI GL Sbjct: 318 EMYVQGMSTSLPEDVQVKMYRSVIGLENVKIMRPAYAIEYDCINPLQLEPTLQFKKIKGL 377 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGT+GYEEAAAQG++AGIN+A + + R+ +YIGV+IDDL +KG EP Sbjct: 378 FSAGQINGTSGYEEAAAQGIIAGINAAMYVKGKEMLILDRSQAYIGVLIDDLVTKGTNEP 437 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT IG K+G I ++R ++F + + + +K+ V+ Sbjct: 438 YRIMTSRAEYRLILRQDNADLRLTEIGYKIGLISQQRYEKFLQKKKMIEDEINRVKNTVI 497 Query: 484 TSKNLSSTSISFKQDGKTRT---AYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + + K T + L P+ S ++L I P V + ++IE Sbjct: 498 APSEKVNKFLQEKGSSPISTGVKLSDLLKRPELSYEDLKEIDPARPDLPWYVQDEVEIEI 557 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y +Q+ + ++ K E + IP+ DYS + LS E ++KLS ++P ++ QAS+I G Sbjct: 558 KYEGYIKKQLAQIEQFKKLENKKIPEWVDYSQILGLSTEARQKLSQIRPASIGQASRISG 617 Query: 601 MTPAALNLLLIYIK 614 ++PA +++LLI+++ Sbjct: 618 VSPADISVLLIWLE 631 >gi|229065142|ref|ZP_04200435.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus AH603] gi|228716171|gb|EEL67890.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus cereus AH603] Length = 629 Score = 812 bits (2098), Expect = 0.0, Method: Composition-based stats. Identities = 284/618 (45%), Positives = 392/618 (63%), Gaps = 7/618 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDAL Sbjct: 8 YDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 68 GGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLFQGLVE 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + ++ Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 128 RLIIEDGVCKGVITQAGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSEH 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 + FD R KTGTP R++ TI + KTE Q D++ FSF T K QI C +T T Sbjct: 188 LEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDDKPRAFSFETTKFIMDQIPCWLTYT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 + ETHR+I EN+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT V Sbjct: 248 STETHRLIDENLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQEV 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+ST+LPE++Q +RTIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 308 YVQGLSTSLPEDVQRAMLRTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLYT 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQINGT+GYEEAA QGL+AGIN+A +S + R D+YIGV+IDDL +KG EPYR Sbjct: 368 AGQINGTSGYEEAAGQGLMAGINAACRSLGKKEVILGRADAYIGVLIDDLVTKGTNEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 + TSRAEYR+ LR DNAD RLT +G ++G I E R +RF + + L+S+ + Sbjct: 428 LLTSRAEYRLLLRHDNADLRLTEVGREIGLIKEDRYERFTNKKLQIEQEKERLESIFIKP 487 Query: 486 -----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + + S S +DG A + L P+ + +++ + P S + E+++I++ Sbjct: 488 RPEVQELIRSIGGSELKDGIR--ASDLLRRPEVTYEHIHLLVPSEVALSDEITEQVEIQT 545 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y + + + + +K E + IP D DY ++ +L++E ++KL ++P ++ QAS+I G Sbjct: 546 KYEGYIEKSLQQVERMKKMENKKIPVDIDYDAISSLASEARQKLKDVRPLSMGQASRISG 605 Query: 601 MTPAALNLLLIYIKKNTV 618 + PA +++LLIYI++ + Sbjct: 606 VNPADVSILLIYIEQGKI 623 >gi|254250984|ref|ZP_04944302.1| Glucose-inhibited division protein A subfamily [Burkholderia dolosa AUO158] gi|124893593|gb|EAY67473.1| Glucose-inhibited division protein A subfamily [Burkholderia dolosa AUO158] Length = 656 Score = 812 bits (2098), Expect = 0.0, Method: Composition-based stats. Identities = 289/629 (45%), Positives = 386/629 (61%), Gaps = 15/629 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DA Sbjct: 6 EFDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D +GIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q V Sbjct: 66 LGGAMAAATDESGIQFRILNSSKGPAVRATRAQADRVLYKAAIRRRLENQPNLWLFQQAV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + V Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 126 DDLMVEGDRVVGAVTQIGIRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSA 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITNRQ-IECGI 242 + GRLKTGTP R+DG+TI + K ++Q D IP FSF+ + Q + C + Sbjct: 186 RLKELKLPQGRLKTGTPPRIDGRTIDFSKLDEQPGDLDPIPVFSFLGRVEQHPQQLPCWV 245 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPEGL T Sbjct: 246 THTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPEGLTT 305 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + YPNGIST+LP ++Q + + ++ GLE +I+RPGYAIEYDY +P+ L +LETK I+G Sbjct: 306 NEFYPNGISTSLPFDVQLELVHSMRGLENAHILRPGYAIEYDYFDPRALKASLETKAING 365 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AG+N+ R + D C R +Y+GV++DDL ++GV E Sbjct: 366 LFFAGQINGTTGYEEAAAQGLLAGLNAGRYVQEKDAWCPRRDQAYLGVLVDDLVTRGVAE 425 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F + + LKS Sbjct: 426 PYRMFTSRAEYRLSLREDNADMRLTEIGRELGLVDDVRWDAFCRKRDAVSRETERLKSTW 485 Query: 483 LTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNL----------FSICPDARKFS 529 +T K L +T++ K + E L P S + D Sbjct: 486 VTPKTLPAEEATALLGKAIDHEYSLAELLRRPGVSYDGVCGLKGGECGPAEPLADDPVLL 545 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 + + E+++I Y Y RQ E + E +P DY + LS E+ +KL+ +P Sbjct: 546 AQIKEQVEIGIKYQGYIERQANEIERNDANENTRLPDGIDYRDVRGLSFEVSQKLNEFRP 605 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKKNTV 618 + QAS+I G+TPAA++LL++++K+ + Sbjct: 606 ETIGQASRISGVTPAAISLLMVHLKRRGL 634 >gi|254246686|ref|ZP_04940007.1| Glucose-inhibited division protein [Burkholderia cenocepacia PC184] gi|124871462|gb|EAY63178.1| Glucose-inhibited division protein [Burkholderia cenocepacia PC184] Length = 656 Score = 812 bits (2098), Expect = 0.0, Method: Composition-based stats. Identities = 288/633 (45%), Positives = 386/633 (60%), Gaps = 15/633 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+ Sbjct: 2 LFPTEFDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DAL G M D +GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Sbjct: 62 EVDALGGAMAAATDESGIQFRILNSSKGPAVRATRAQADRILYKAAIRHRLENQPNLWLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + + V Q R VVLT GTFL G IH+G GR GD + Sbjct: 122 QQAVDDLMVEGDRVVGAVTQIGIRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAV 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITNRQ-I 238 SL + + GRLKTGTP R+DG+TI + K ++Q D IP FSF+ + Q + Sbjct: 182 SLSSRLKELKLPQGRLKTGTPPRIDGRTIDFSKLDEQPGDLDPIPVFSFLGRADQHPQQL 241 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C +T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPE Sbjct: 242 PCWVTHTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPE 301 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL T YPNGIST+LP ++Q + + ++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 302 GLTTHEFYPNGISTSLPFDVQLELVHSMRGLENAHILRPGYAIEYDYFDPRALKASLETK 361 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I+GLF AGQINGTTGYEEAAAQGL+AG+N+ R + D C R +Y+GV++DDL ++ Sbjct: 362 AINGLFFAGQINGTTGYEEAAAQGLLAGLNAGRYVQEKDAWCPRRDQAYLGVLVDDLVTR 421 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 GV EPYRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F++ + L Sbjct: 422 GVAEPYRMFTSRAEYRLSLREDNADMRLTEIGRELGLVDDARWDAFSRKRDAVSRETERL 481 Query: 479 KSLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNL----------FSICPDA 525 KS +T K L +T++ K + E L P S + D Sbjct: 482 KSTWVTPKTLPAEEATALLGKAIDHEYSLAELLRRPGVSYDGVCGLKGGECGPAEPLADD 541 Query: 526 RKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 + E+++I Y Y RQ E + E +P DY + LS E+ +KL+ Sbjct: 542 PVLLEQIKEQVEIGIKYQGYIERQASEIERNDANENTRLPDGIDYREVRGLSFEVSQKLN 601 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYIKKNTV 618 +P + QAS+I G+TPAA++LL++++K+ + Sbjct: 602 EFRPETIGQASRISGVTPAAISLLMVHLKRRGL 634 >gi|229847407|ref|ZP_04467507.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Haemophilus influenzae 7P49H1] gi|229809645|gb|EEP45371.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Haemophilus influenzae 7P49H1] Length = 629 Score = 812 bits (2098), Expect = 0.0, Method: Composition-based stats. Identities = 293/622 (47%), Positives = 393/622 (63%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +YDVIVIGGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 YTETYDVIVIGGGHAGTEAALAPARMGLKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DA+ GLM D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q Sbjct: 63 VDAMGGLMAHTTDKAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 E E++ ++ + + + R +VVLT GTFL G IHIG GR GD S + Sbjct: 123 QEATDILIEQDRVTGVSTKMGLIFRAKSVVLTAGTFLAGKIHIGLENYEGGRAGDPASVN 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IEC 240 L RLKTGTP R+D +TI +D KQ +D L FSFM + Q I C Sbjct: 183 LSYRLRDLGLRVDRLKTGTPPRIDARTINFDILAKQHSDAVLPVFSFMGSVSDHPQQIPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL Sbjct: 243 YITHTNEQTHEVIRNNLDRSPMYTGVIEGVGPRYCPSIEDKVMRFADRNSHQIYLEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 ++ VYPNGIST+LP ++Q + ++ GLE I++PGYAIEYDY +P++L PTLETK I Sbjct: 303 TSNEVYPNGISTSLPFDVQMGIVNSMKGLENARIVKPGYAIEYDYFDPRDLKPTLETKSI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 SGLF AGQINGTTGYEEAAAQGL+AGIN+ + D R SY GV++DDL + G Sbjct: 363 SGLFFAGQINGTTGYEEAAAQGLLAGINAGLYVQEKDAWYPRRDQSYTGVLVDDLCTLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYR+FTSRAEYR+ LR DNAD RLTPI +LG I + R RF + ++ R L++ Sbjct: 423 KEPYRVFTSRAEYRLLLREDNADIRLTPIAHELGLIDDARWARFNQKMENIEQERQRLRN 482 Query: 481 LVLTSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 + L ++ + + + + + L P+ + L S+ P +E++ Sbjct: 483 IWLHPRSEYLEEANKVLGSPLVREASGEDLLRRPEMTYDILTSLTPYKPAMEDKEAVEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I Y Y Q E ++ K E IP +FDYS + +LSNE++ KL +P ++ QAS Sbjct: 543 EIAIKYQGYIEHQQEEIEKQKRHENTAIPANFDYSKVSSLSNEVRAKLEQHRPVSISQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA++++L+ +KK + Sbjct: 603 RISGITPAAISIILVNLKKQGM 624 >gi|152980753|ref|YP_001355329.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Janthinobacterium sp. Marseille] gi|166222939|sp|A6T482|MNMG_JANMA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|151280830|gb|ABR89240.1| glucose inhibited division protein A [Janthinobacterium sp. Marseille] Length = 645 Score = 812 bits (2098), Expect = 0.0, Method: Composition-based stats. Identities = 295/631 (46%), Positives = 398/631 (63%), Gaps = 12/631 (1%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + +DVIV+GGGHAG EAA +A++G ST L++H T+G MSCNP+IGG+GKGHLV+ Sbjct: 2 IFPTKFDVIVVGGGHAGTEAALASARMGQSTLLLSHNIETLGQMSCNPSIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ G M D AGIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Sbjct: 62 EVDAMGGAMAIATDEAGIQFRILNSSKGPAVRATRAQADRILYKQAIRSRLENQPNLWLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + + V Q VVLT GTFL G IH+G AGR GD P+ Sbjct: 122 QQAVDDLLVEGDRVIGAVTQVGIKFYARAVVLTAGTFLDGKIHVGLNNYSAGRAGDPPAI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTD-KITNRQI 238 SL + GRLKTGTP R+DG++I + ++Q D IP FS M + +Q+ Sbjct: 182 SLSARLKELKLPQGRLKTGTPPRIDGRSIDFSVMQEQPGDLDPIPVFSVMGSVAMHPKQM 241 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C IT TN +TH +I + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPE Sbjct: 242 PCWITHTNEKTHDLIRSGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFAGKDSHQIFLEPE 301 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL T+ YPNGIST+LP +IQ ++++ GLE +I+RPGYAIEYDY +P+ L TLETK Sbjct: 302 GLTTNEFYPNGISTSLPFDIQLALVQSMRGLEHAHILRPGYAIEYDYFDPRGLKSTLETK 361 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I GLF AGQINGTTGYEEAAAQG++AGIN+A ++ + D R ++Y+GVM+DDL +K Sbjct: 362 VIQGLFFAGQINGTTGYEEAAAQGMLAGINAALQTQERDAWTPRRDEAYLGVMVDDLITK 421 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 GVLEPYRMFTSRAEYR+SLR DNAD RLT IG +LGC+G+ + F + L Sbjct: 422 GVLEPYRMFTSRAEYRLSLREDNADMRLTEIGRQLGCVGDAQWAVFETKREAVARELERL 481 Query: 479 KSLVLTSK---NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI-CPDARKF------ 528 +S ++ + + + K + + L P+ S + L S+ D + Sbjct: 482 RSTWVSPRILAEAEAERVLGKGIEREYALADLLRRPNVSYETLMSLKGVDGQDLAGPGVA 541 Query: 529 SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 V E+++I+ YA Y RQ E + + E +P++FDY + LS E+++KL K Sbjct: 542 EDAVREQVEIQLKYAGYIDRQAKEVERHDYYENLKLPQEFDYMEVKGLSFEVRQKLCKHK 601 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 P L QAS+I G+TPAA++LLL+++KK K Sbjct: 602 PETLGQASRISGVTPAAISLLLVHLKKGGFK 632 >gi|170724367|ref|YP_001752055.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas putida W619] gi|205375707|sp|B1JFV2|MNMG_PSEPW RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|169762370|gb|ACA75686.1| glucose inhibited division protein A [Pseudomonas putida W619] Length = 630 Score = 812 bits (2097), Expect = 0.0, Method: Composition-based stats. Identities = 285/621 (45%), Positives = 383/621 (61%), Gaps = 5/621 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+E Sbjct: 3 FPSRFEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGHMSCNPAIGGIGKSHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M D +GIQFRVLN +KGPAVR R QADR +Y+ ++ + +Q NL + Q Sbjct: 63 IDALGGAMALATDKSGIQFRVLNNRKGPAVRATRAQADRAIYKAVVREILENQPNLWIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 E++ + +V Q +VVLTTGTFL G+IHIG GR GD PS + Sbjct: 123 QSCDDLIVEQDQVKGVVTQMGLRFFADSVVLTTGTFLGGLIHIGLQNHSGGRAGDPPSIA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK-ITNRQIEC 240 L + + GRLKTGTP R+DG+++ + +Q D + SFM + + RQ+ C Sbjct: 183 LAHRMRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFMGNAAMHPRQVSC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL Sbjct: 243 WITHTNARTHEIIASNLDRSPMYSGVIEGVGPRYCPSIEDKIHRFADKESHQVFIEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T +YPNGIST+LP ++Q + +R+I G+E +I+RPGYAIEYDY +P++L +LETK I Sbjct: 303 TTHELYPNGISTSLPFDVQLELVRSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQINGTTGYEEA AQGL+AG N+A ++ + C R ++YIGV++DDL + G Sbjct: 363 GGLFFAGQINGTTGYEEAGAQGLLAGTNAALRAQGRESWCPRRDEAYIGVLVDDLITLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT G +LG I ++R F LKS Sbjct: 423 QEPYRMFTSRAEYRLILREDNADLRLTEKGRELGLIDDQRWAAFCAKRDGIEREEQRLKS 482 Query: 481 LVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 + ++ K + L+ P+ L + V E+++ Sbjct: 483 TWVRPNTPQGQAVVDKFGTPLSHEYSLLNLLARPEVDYAGLIEATGG-EQIDPQVAEQVE 541 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I++ YA Y RQ E ++ E +P D DY+S+ LS E++ KL +P L QAS+ Sbjct: 542 IKTKYAGYIDRQQDEIARLRASEDTCLPVDIDYTSISGLSKEIQGKLGQTRPQTLGQASR 601 Query: 598 IEGMTPAALNLLLIYIKKNTV 618 I G+TPAA++LLLI++KK Sbjct: 602 IPGVTPAAISLLLIHLKKRGA 622 >gi|330952340|gb|EGH52600.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae Cit 7] gi|330987013|gb|EGH85116.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. lachrymans str. M301315] Length = 630 Score = 812 bits (2097), Expect = 0.0, Method: Composition-based stats. Identities = 288/617 (46%), Positives = 385/617 (62%), Gaps = 5/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIRETLENQPNLWIFQQACD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 127 DLIVEQDQVRGVVTQMGMRIFADSVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ +K + + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGNKEQHPPQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 247 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R+I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVRSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCTKRESIELEEQRLKSTWVR 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +I+ L+ P+ +L SI V E+++I++ Sbjct: 487 PGTEQGDAIAAHFGTPLTHEYNLLNLLTRPEIDYASLISITGQGC-IDPQVAEQVEIKTK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E ++ E +P+D DY+++ LS E++ KL I +P L QAS+I G+ Sbjct: 546 YAGYIDRQQDEIARLRASEDTRLPEDIDYAAISGLSKEIQSKLGITRPETLGQASRIPGV 605 Query: 602 TPAALNLLLIYIKKNTV 618 TPAA++LL+I++KK Sbjct: 606 TPAAISLLMIHLKKRGA 622 >gi|260913576|ref|ZP_05920053.1| glucose-inhibited division protein A [Pasteurella dagmatis ATCC 43325] gi|260632352|gb|EEX50526.1| glucose-inhibited division protein A [Pasteurella dagmatis ATCC 43325] Length = 629 Score = 812 bits (2097), Expect = 0.0, Method: Composition-based stats. Identities = 298/622 (47%), Positives = 395/622 (63%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +YDVIVIGGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLVRE Sbjct: 3 YTENYDVIVIGGGHAGTEAALAPARMGLKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVRE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDA+ GLM AD AGIQFR LN KGPAVR R QADR LYR A++ + +Q+NLD+ Q Sbjct: 63 IDAMGGLMATAADQAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRIALENQDNLDIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 EV E + +S + + R V+LT GTFL G IHIG GR GD S Sbjct: 123 QEVTDIILEGDRVSGVETKMGLKFRAKAVILTAGTFLSGKIHIGLENYTGGRAGDPASVM 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIEC 240 L + + RLKTGTP R+D +TI + KQ DE+L FSFM + QI C Sbjct: 183 LADRLRDLNLRVDRLKTGTPPRIDARTIDFSILAKQHGDEKLPVFSFMGSVDQHPCQIPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ERN HQI+LEPEGL Sbjct: 243 FITHTNEQTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFSERNSHQIYLEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 ++ +YPNGIST+LP ++Q + + ++ G+EK I++PGYAIEYDY +P++L PTLETK I Sbjct: 303 TSNEIYPNGISTSLPFDVQMKIVNSMKGMEKARIVKPGYAIEYDYFDPRDLKPTLETKSI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 SGLF AGQINGTTGYEEAAAQGL+AGIN+ + D R +Y+GV++DDL + G Sbjct: 363 SGLFFAGQINGTTGYEEAAAQGLLAGINAGLFVQEKDAWFPRRDQAYVGVLVDDLCTLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYR+FTSRAEYR+ LR DNAD+RLTPI +LG I E R RF + ++ R L+ Sbjct: 423 KEPYRVFTSRAEYRLLLREDNADSRLTPIAQELGLITEERWARFNQKMENIELERQRLRQ 482 Query: 481 LVLTSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 + L ++ + + + + L P+ + Q L ++ P +E++ Sbjct: 483 IWLHPRSEYLEEANQVLSSPLVREANGEDLLRRPEINYQILTTLTPFQPAMKDKEAVEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I Y Y Q E + K E IP +FDYS + LSNE++ KL +P ++ QAS Sbjct: 543 EIAIKYQGYIEHQQEEIERQKRHENTTIPANFDYSVVSGLSNEVRAKLEQHRPVSIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA+++LL+ +KK + Sbjct: 603 RISGITPAAISILLVNLKKQGM 624 >gi|269103813|ref|ZP_06156510.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Photobacterium damselae subsp. damselae CIP 102761] gi|268163711|gb|EEZ42207.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Photobacterium damselae subsp. damselae CIP 102761] Length = 629 Score = 812 bits (2097), Expect = 0.0, Method: Composition-based stats. Identities = 292/624 (46%), Positives = 392/624 (62%), Gaps = 6/624 (0%) Query: 1 MINR-SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLV 59 M + ++DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV Sbjct: 1 MFYQDNFDVIVVGGGHAGTEAALAAARMGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLV 60 Query: 60 REIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDV 119 +E+DAL GLM R D GIQFR LN KGPAVR R QADR LY+ A++ + +Q NL + Sbjct: 61 KEVDALGGLMARAIDKGGIQFRTLNSSKGPAVRATRAQADRALYKAAVREALENQPNLML 120 Query: 120 IQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 Q V E++ + V + R VVLT GTFL G IHIG GR GD PS Sbjct: 121 FQQAVTDLIVEQDRVVGAVTEMGLKFRAKAVVLTVGTFLGGRIHIGLENYNGGRAGDPPS 180 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQI 238 +L + + F RLKTGTP R+D +T+ + EKQF D FSFM + + RQI Sbjct: 181 IALAHRLRELPFRVSRLKTGTPPRIDARTVDFSVLEKQFGDNPTPVFSFMGKQSDHPRQI 240 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C IT TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPE Sbjct: 241 PCFITHTNERTHDVIRNNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADKNSHQIFIEPE 300 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 301 GLTTHELYPNGISTSLPFDVQMQIVRSMKGFENADIVRPGYAIEYDFFDPRDLKQTFETK 360 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 ++GLF AGQINGTTGYEEAAAQGL+AG+N+A + D R +Y+GV+IDDL++ Sbjct: 361 FMAGLFFAGQINGTTGYEEAAAQGLLAGMNAALCAQGKDGWSPRRDQAYMGVLIDDLSTI 420 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYRMFTSRAEYR+ LR DNAD RLT +G + G + + R RF + I+ R L Sbjct: 421 GTKEPYRMFTSRAEYRLLLREDNADLRLTEMGRQFGLVDDERWARFNQKIENMEQERQRL 480 Query: 479 KSLVLTSKNLSSTSIS---FKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIE 534 K + + + ++ + + + L P+ + L +I E Sbjct: 481 KDIWINPNSAQVDELNKILKTPIVREASGEDLLRRPEVTYDMLTAIETFGPALEDTQASE 540 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E ++ EK +P D DYS + LSNE+ KL+ KP + Sbjct: 541 QVEIQVKYQGYIDRQKDEVEKSLRHEKTKLPFDLDYSVVKGLSNEVIAKLNDAKPETVGM 600 Query: 595 ASKIEGMTPAALNLLLIYIKKNTV 618 AS+I G+TPAA++LLL+Y+KK + Sbjct: 601 ASRISGVTPAAISLLLVYLKKQGL 624 >gi|253573864|ref|ZP_04851206.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Paenibacillus sp. oral taxon 786 str. D14] gi|251846341|gb|EES74347.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Paenibacillus sp. oral taxon 786 str. D14] Length = 628 Score = 812 bits (2097), Expect = 0.0, Method: Composition-based stats. Identities = 272/616 (44%), Positives = 387/616 (62%), Gaps = 2/616 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +Y+VIV+G GHAGCEAA AA++G T ++T + M CNP+IGG KGH+VREIDA Sbjct: 7 NYEVIVVGAGHAGCEAALAAARMGCRTLMVTINLDMVAFMPCNPSIGGPAKGHVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAV R QAD+ LY+ AM+ + + NL ++QG V Sbjct: 67 LGGEMGRNIDKTFIQMRMLNTGKGPAVHALRAQADKFLYQHAMKETLEKEPNLTMLQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ + + R VVLTTGT+LRG I +G+L +G PS L Sbjct: 127 EELIVEDGQCVGVITKTGAEYRAKAVVLTTGTYLRGKIIMGELMYESGPNNQQPSVRLAQ 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + + F+ R KTGTP R+ +I + +TE Q DE+ FS+ T N Q+ C +T Sbjct: 187 NLKELGFELVRFKTGTPPRVHKDSIDFSQTEIQPGDEKPKFFSYETKSSDNEQLPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETH+II +N+ + ++SG I+ GPRYCPSIEDKIVRF ++ HQIFLEPEG NT Sbjct: 247 TSEETHKIITDNLHRAPMFSGVIEGTGPRYCPSIEDKIVRFSDKPKHQIFLEPEGKNTSE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 Y G ST++PEE+Q Q +R++PGL+ V ++R GYAIEYD + P +L+P+LETK++ GLF Sbjct: 307 YYVQGFSTSMPEEVQLQMLRSVPGLQNVQMMRTGYAIEYDAVVPTQLWPSLETKRLPGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QG++AGIN+ARK + I R+ YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGIMAGINAARKVQGKEPIVLDRSQGYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLTP+G ++G I E R RF Q+ LK+ + Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTPLGYEIGLISEERYARFLDKKQKVEQEIERLKTTKIR 486 Query: 485 SKNLSS--TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSY 542 ++ SI L P+ + ++ SI P + + E+++I+ Y Sbjct: 487 PTEINPLLESIGSAPIQDGSNLLTILRRPEVTYAHIASISPSEVELDEEMQEQVEIQIKY 546 Query: 543 AAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMT 602 A Y +Q+I + ++ EK+ IP++ +Y + L+ E ++KLS ++P ++ QAS+I G+T Sbjct: 547 AGYIEKQLIHVERLQKMEKKKIPENINYDDIQGLAIEARQKLSKIRPISIGQASRISGVT 606 Query: 603 PAALNLLLIYIKKNTV 618 PA +++LL+Y++ Sbjct: 607 PADISILLVYLEHYNR 622 >gi|332289277|ref|YP_004420129.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Gallibacterium anatis UMN179] gi|330432173|gb|AEC17232.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Gallibacterium anatis UMN179] Length = 629 Score = 812 bits (2097), Expect = 0.0, Method: Composition-based stats. Identities = 293/623 (47%), Positives = 390/623 (62%), Gaps = 5/623 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + YDVIV+GGGHAG EAA A++G T LITH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYPNQYDVIVVGGGHAGTEAALAPARMGLKTLLITHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL GLM D AGIQFR LN KGPAVR R QADR LYR A++ + Q NLD+ Sbjct: 62 EIDALGGLMAHATDQAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALEKQPNLDLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q EV E +S + + + VVLT GTFL G IHIG GR GD S Sbjct: 122 QQEVTDILIENGHVSGVSTKMGLTFKAKAVVLTAGTFLAGKIHIGLDHYEGGRAGDPASV 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IE 239 L D RLKTGTP RLD +TI + ++Q DE L FS+M + Q + Sbjct: 182 RLAERLRDLDLRVARLKTGTPPRLDARTIDFSVLKQQHGDEILPVFSYMGSVDEHPQQVP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TNL+TH II N+ S +Y+G I+ GPRYCPSIEDK++RFG+RNGHQIFLEPEG Sbjct: 242 CYITHTNLKTHDIIRANLDRSPMYTGIIEGVGPRYCPSIEDKVMRFGDRNGHQIFLEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L ++ +YPNGIST+LP ++Q + ++ GLE I++PGYAIEYD+ +P++L P+LETK Sbjct: 302 LTSNEIYPNGISTSLPFDVQMGIVNSMQGLENARIVKPGYAIEYDFFDPRDLKPSLETKS 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I+GLF AGQINGTTGYEEAAAQG++AG+N+ + R +YIGV++DDL + G Sbjct: 362 INGLFFAGQINGTTGYEEAAAQGILAGLNAGLHVQDKEAWYPRRDQAYIGVLVDDLCTLG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYR+FTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R L+ Sbjct: 422 TKEPYRVFTSRAEYRLLLREDNADLRLTAIGRELGLVDDARWARFNQKLENIELERQRLR 481 Query: 480 SLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIER 535 + + ++ ++ + + L P+ + L + P +E+ Sbjct: 482 QIWIHPRSEYLDEVNAVLNSPLMREANGEDLLRRPEMDYEKLCQLTPFQPAMQDKEAVEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I Y Y Q E + K E LIP +FDYS++ LSNE++ KL +P ++ QA Sbjct: 542 VEISIKYQGYIEHQNEEIERHKRHENTLIPAEFDYSAVVGLSNEVRSKLEQHRPVSIGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV 618 S+I G+TPAA+++LL+Y+KK + Sbjct: 602 SRISGITPAAISILLVYLKKQGM 624 >gi|115350140|ref|YP_771979.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia ambifaria AMMD] gi|122324420|sp|Q0BJM8|MNMG_BURCM RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|115280128|gb|ABI85645.1| glucose inhibited division protein A [Burkholderia ambifaria AMMD] Length = 656 Score = 811 bits (2096), Expect = 0.0, Method: Composition-based stats. Identities = 288/633 (45%), Positives = 388/633 (61%), Gaps = 15/633 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+ Sbjct: 2 LFPTEFDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DAL G M D +GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Sbjct: 62 EVDALGGAMAAATDESGIQFRILNSSKGPAVRATRAQADRILYKAAIRHRLENQPNLWLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + + V Q R VVLT GTFL G IH+G GR GD + Sbjct: 122 QQAVDDLMVEGDRVVGAVTQIGIRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAV 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITNRQ-I 238 SL + GRLKTGTP R+DG++I + K ++Q D IP FSF+ + Q + Sbjct: 182 SLSARLKELKLPQGRLKTGTPPRIDGRSIDFSKLDEQPGDLDPIPVFSFLGRAEQHPQQL 241 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C +T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPE Sbjct: 242 PCWVTHTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPE 301 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL T+ YPNGIST+LP ++Q + + ++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 302 GLTTNEFYPNGISTSLPFDVQLELVHSMRGLENAHILRPGYAIEYDYFDPRALKASLETK 361 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I+GLF AGQINGTTGYEEAAAQGL+AG+N+ R + D C R +Y+GV++DDL ++ Sbjct: 362 AINGLFFAGQINGTTGYEEAAAQGLLAGLNAGRYVQEKDAWCPRRDQAYLGVLVDDLVTR 421 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 GV EPYRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F++ + L Sbjct: 422 GVAEPYRMFTSRAEYRLSLREDNADMRLTEIGRELGLVDDARWDAFSRKRDAVSRETERL 481 Query: 479 KSLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----------CPDA 525 KS +T K L +T++ K + E L P S + S+ D Sbjct: 482 KSTWVTPKTLPPEEATALLGKAIDHEYSLAELLRRPGISYDGVCSLKGGECAPTEPLADD 541 Query: 526 RKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 + E+++I Y Y RQ E + E +P DY + LS E+ +KL+ Sbjct: 542 PVLLEQIKEQVEIGIKYQGYIERQASEIERNDANENTRLPDGIDYREVRGLSFEVSQKLN 601 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYIKKNTV 618 +P + QAS+I G+TPAA++LL++++K+ + Sbjct: 602 EFRPETIGQASRISGVTPAAISLLMVHLKRRGL 634 >gi|148550506|ref|YP_001270608.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas putida F1] gi|166222722|sp|A5WBB4|MNMG_PSEP1 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|148514564|gb|ABQ81424.1| glucose inhibited division protein A [Pseudomonas putida F1] Length = 630 Score = 811 bits (2096), Expect = 0.0, Method: Composition-based stats. Identities = 287/617 (46%), Positives = 383/617 (62%), Gaps = 5/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FDVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGHMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D +GIQFRVLN +KGPAVR R QADR +Y+ ++ + +Q NL + Q Sbjct: 67 GGAMALATDKSGIQFRVLNNRKGPAVRATRAQADRAIYKAVVREILENQPNLWIFQQSCD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q +VVLTTGTFL G+IHIG GR GD PS +L + Sbjct: 127 DLIVEQDQVKGVVTQMGLRFFAESVVLTTGTFLGGLIHIGLQNHSGGRAGDPPSIALAHR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SFM + ++ RQ+ C IT Sbjct: 187 MRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFMGNAEMHPRQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGLNT Sbjct: 247 TNARTHEIIASNLDRSPMYSGVIEGVGPRYCPSIEDKIHRFADKESHQVFIEPEGLNTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q + +R+I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLELVRSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG I + R F LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLIDDLRWAAFCAKRDGIEREEQRLKSTWVR 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 ++ K + L+ P+ L V E+++I + Sbjct: 487 PNTEQGQAVVDKFGTPLSHEYSLLNLLARPEIDYAGLIEATGG-EAIDPQVAEQVEIRTK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E ++ E +P D DY+++ LS E++ KLS +P L QAS+I G+ Sbjct: 546 YAGYIDRQQDEIARLRASEDTRLPVDIDYTTISGLSKEIQGKLSQTRPETLGQASRIPGV 605 Query: 602 TPAALNLLLIYIKKNTV 618 TPAA++L+LI++KK Sbjct: 606 TPAAISLMLIHLKKRGA 622 >gi|228994202|ref|ZP_04154102.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus pseudomycoides DSM 12442] gi|228765654|gb|EEM14308.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus pseudomycoides DSM 12442] Length = 629 Score = 811 bits (2096), Expect = 0.0, Method: Composition-based stats. Identities = 281/619 (45%), Positives = 394/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLRQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ ++ Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEDDVCKGVITQSGAEYTAKTVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q DE+ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDEKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I N+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSEETHRLIDRNLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q + ++TIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQREMLKTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QG++AGIN+A +S + R+D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGIMAGINAACRSLGKKEVILGRSDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT IG ++G I E R RF ++ + L+S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEIGQEIGLIPEERYGRFTVKKEQIEQEKLRLESIIIK 486 Query: 485 S-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + S S +DG A + L P+ + +++ + P + + E+++I+ Sbjct: 487 PRPEVQELIRSVGGSELKDGIR--ASDLLRRPEMTYEHIRILAPSEVEIHDEIAEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + + +K E + IP D DY ++ +++E ++KL ++P ++ QAS+I Sbjct: 545 IKYEGYIEKSLQQVERMKKMESKKIPVDIDYDAISGIASEARQKLKDVRPLSMGQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 605 GVNPADISILLVYIEQGKI 623 >gi|237747167|ref|ZP_04577647.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Oxalobacter formigenes HOxBLS] gi|229378518|gb|EEO28609.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Oxalobacter formigenes HOxBLS] Length = 640 Score = 811 bits (2096), Expect = 0.0, Method: Composition-based stats. Identities = 297/626 (47%), Positives = 405/626 (64%), Gaps = 12/626 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+GGGHAG EAA V+A++G +T LITH T+G +SCNP+IGG+GK HLVRE+DA Sbjct: 6 NFDVIVVGGGHAGTEAALVSARMGRNTLLITHNFETLGQLSCNPSIGGIGKSHLVREVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G+M AD AGIQFRVLN KGPAVR R Q DR +YR A++ E+ +QENL + Q +V Sbjct: 66 LGGVMALAADKAGIQFRVLNSSKGPAVRATRVQIDRVIYRQAIRYELENQENLFLFQQQV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E+ ++ + + R S VVLT GTFL G I +G GR GD P+ +L Sbjct: 126 DDLIVEQGKVAGVRTEGGVEFRSSAVVLTAGTFLDGKIFVGLNSYSGGRSGDVPAIALAK 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDK-ITNRQIECGI 242 + + GRLKTGTP R+DG+TI + ++Q+ D IP FS + + Q+ C I Sbjct: 186 FLKELELPQGRLKTGTPPRIDGRTIDFSVMKEQWGDFDPIPVFSLRGNVSMHPEQLPCWI 245 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II + S +++G I+ GPRYCPSIEDKI RF ++N HQIFLEPEGL T Sbjct: 246 THTNSGTHDIIRSGLDRSPLFTGVIEGVGPRYCPSIEDKIHRFSDKNSHQIFLEPEGLKT 305 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 YPNGIST+LP + Q + + +IPGLEK +I+RPGYAIEYD+ +P+ L +LET++ISG Sbjct: 306 HEYYPNGISTSLPFDTQIELVHSIPGLEKAHILRPGYAIEYDFYDPRCLKSSLETRQISG 365 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AGIN+AR + R ++Y+GVMIDDL ++GV E Sbjct: 366 LFFAGQINGTTGYEEAAAQGLLAGINAARYVTGDEPWVPKRNEAYLGVMIDDLITQGVNE 425 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+SLR DNAD RLT +G K+GC+ + + + F + ++ +KS Sbjct: 426 PYRMFTSRAEYRLSLREDNADMRLTELGYKIGCVSKEQWENFQRKKEKIAREIERMKSTW 485 Query: 483 LTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI-------CPDARKFSSLV 532 + L + + K + + + L PD + L S+ + Sbjct: 486 VHPSMLSVKEAERVIGKGIEREYSLADLLRRPDVTYDGLMSMISVENGNWKTDEELDGSE 545 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 E+++I+ YA Y RQ+ E K ++ E +P++ +YS + ALS E+++KL KP L Sbjct: 546 KEQVEIQIKYAGYIERQLREVKRQQYYENLRLPENMNYSEVNALSFEVRQKLDKQKPETL 605 Query: 593 LQASKIEGMTPAALNLLLIYIKKNTV 618 QAS+I G+TPAA++LLLIY+KK + Sbjct: 606 GQASRISGVTPAAISLLLIYLKKQGL 631 >gi|308188710|ref|YP_003932841.1| glucose-inhibited division protein A [Pantoea vagans C9-1] gi|308059220|gb|ADO11392.1| Glucose-inhibited division protein A [Pantoea vagans C9-1] Length = 629 Score = 811 bits (2096), Expect = 0.0, Method: Composition-based stats. Identities = 292/624 (46%), Positives = 390/624 (62%), Gaps = 6/624 (0%) Query: 1 MINRS-YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLV 59 M + +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV Sbjct: 1 MFYQDPFDVIVIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLV 60 Query: 60 REIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDV 119 +E+DAL GLM D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Sbjct: 61 KEVDALGGLMASAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMI 120 Query: 120 IQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 Q V E + + V Q R TVVLT GTFL G IHIG GR GD PS Sbjct: 121 FQQAVDDLIVENDRVVGAVTQMGLKFRAKTVVLTVGTFLDGKIHIGLDNYSGGRAGDPPS 180 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-I 238 L RLKTGTP R+D +TI + Q D + FSFM + + Q + Sbjct: 181 IPLAKRLRALPLRVNRLKTGTPPRIDARTIDFSVLSPQHGDNPMPVFSFMGNASQHPQQV 240 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPE Sbjct: 241 PCWITHTNEKTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNSHQIFLEPE 300 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL ++ +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K Sbjct: 301 GLTSNEIYPNGISTSLPFDVQIQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESK 360 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I GLF AGQINGTTGYEEAAAQG++AG+N+AR+S + R +Y+GV++DDL + Sbjct: 361 FIHGLFFAGQINGTTGYEEAAAQGMLAGLNAARQSADKEGWAPRRDQAYLGVLVDDLCTL 420 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYRMFTSRAEYR+ LR DNAD RLT G +LG + + R RF + ++ R L Sbjct: 421 GTKEPYRMFTSRAEYRLMLREDNADLRLTETGRELGLVDDARWARFNQKLEAIEQERQRL 480 Query: 479 KSLVLTSKNLSSTSIS---FKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIE 534 + + + K+ T ++ K + + L P+ + L ++ E Sbjct: 481 RDIWVHPKSEHVTEVNTVLSAPLTKEASGEDLLRRPELTYLKLMTLDAFGPALADEQAAE 540 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E E L+P + DY + LSNE+ KL+ KP ++ Q Sbjct: 541 QVEIQVKYEGYIARQQEEIDRQLRNENTLLPVELDYRQVNGLSNEVIAKLNDHKPVSIGQ 600 Query: 595 ASKIEGMTPAALNLLLIYIKKNTV 618 A++I G+TPAA+++LLIY+KK + Sbjct: 601 ATRISGITPAAISILLIYLKKQGL 624 >gi|172059160|ref|YP_001806812.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia ambifaria MC40-6] gi|205831492|sp|B1YQK2|MNMG_BURA4 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|171991677|gb|ACB62596.1| glucose inhibited division protein A [Burkholderia ambifaria MC40-6] Length = 656 Score = 811 bits (2096), Expect = 0.0, Method: Composition-based stats. Identities = 288/633 (45%), Positives = 388/633 (61%), Gaps = 15/633 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+ Sbjct: 2 LFPTEFDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DAL G M D +GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Sbjct: 62 EVDALGGAMAAATDESGIQFRILNSSKGPAVRATRAQADRILYKAAIRHRLENQPNLWLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + + V Q R VVLT GTFL G IH+G GR GD + Sbjct: 122 QQAVDDLMVEGDRVVGAVTQIGIRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAV 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITNRQ-I 238 SL + GRLKTGTP R+DG++I + K ++Q D IP FSF+ + Q + Sbjct: 182 SLSARLKELKLPQGRLKTGTPPRIDGRSIDFSKLDEQPGDLDPIPVFSFLGRAEQHPQQL 241 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C +T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPE Sbjct: 242 PCWVTHTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPE 301 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL T+ YPNGIST+LP ++Q + + ++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 302 GLTTNEFYPNGISTSLPFDVQLELVHSMRGLENAHILRPGYAIEYDYFDPRALKASLETK 361 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I+GLF AGQINGTTGYEEAAAQGL+AG+N+ R + D C R +Y+GV++DDL ++ Sbjct: 362 AINGLFFAGQINGTTGYEEAAAQGLLAGLNAGRYVQEKDAWCPRRDQAYLGVLVDDLVTR 421 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 GV EPYRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F++ + L Sbjct: 422 GVAEPYRMFTSRAEYRLSLREDNADMRLTEIGRELGLVDDARWDAFSRKRDAVSRETERL 481 Query: 479 KSLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----------CPDA 525 KS +T K L +T++ K + E L P S + S+ D Sbjct: 482 KSTWVTPKTLPPKEATALLGKAIDHEYSLAELLRRPGISYDGVCSLKGGECAPAEPLADD 541 Query: 526 RKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 + E+++I Y Y RQ E + E +P DY + LS E+ +KL+ Sbjct: 542 PVLLEQIKEQVEIGIKYQGYIERQASEIERNDANENTRLPDGIDYREVRGLSFEVSQKLN 601 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYIKKNTV 618 +P + QAS+I G+TPAA++LL++++K+ + Sbjct: 602 EFRPETIGQASRISGVTPAAISLLMVHLKRRGL 634 >gi|89074717|ref|ZP_01161175.1| glucose-inhibited division protein A [Photobacterium sp. SKA34] gi|89049481|gb|EAR55042.1| glucose-inhibited division protein A [Photobacterium sp. SKA34] Length = 629 Score = 811 bits (2095), Expect = 0.0, Method: Composition-based stats. Identities = 290/622 (46%), Positives = 389/622 (62%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 YQEKFDVIVVGGGHAGTEAALAAARMGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DAL GLM + D GIQFR LN KGPAVR R QADR LY+ A++ + +QENL + Q Sbjct: 63 VDALGGLMAQAIDKGGIQFRTLNSSKGPAVRATRAQADRVLYKAAVRNVLENQENLMIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E + +V + VVLT GTFL G IHIG GR GD SN+ Sbjct: 123 QAVTDLIVENHRAVGVVTEMGLKFHAKAVVLTVGTFLGGKIHIGMENYSGGRTGDPASNA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIEC 240 L + + RLKTGTP R+D +++ + E+Q D FSFM + RQI C Sbjct: 183 LADRLRELPLRVDRLKTGTPPRIDARSVDFSVLEEQHGDNPTPTFSFMGKSSDHPRQIPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEGL Sbjct: 243 FITYTNERTHEVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T+ +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T E K I Sbjct: 303 TTNELYPNGISTSLPFDVQMQIVRSMQGFENASIMRPGYAIEYDFFDPRDLKQTFENKYI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQINGTTGYEEAAAQGL+AG+N+A + D R +Y+GV+IDDL++ G Sbjct: 363 DGLFFAGQINGTTGYEEAAAQGLMAGMNAALQVQDKDGWSPRRDQAYMGVLIDDLSTIGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLTP+G + G + + R RF + I+ R LK Sbjct: 423 KEPYRMFTSRAEYRLLLREDNADLRLTPMGREFGLVDDARWSRFNQKIENMELERQRLKD 482 Query: 481 LVLTSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERL 536 + + K+ I + + + L P+ + + L SI A E++ Sbjct: 483 IWINPKSDHVDELNKILKAPIAREASGEDLLRRPEVTYEQLTSIETFAPALDDREAREQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y Y RQ E ++ E +P D DYS++ LSNE+ KL+ KP ++ AS Sbjct: 543 EIQVKYQGYIDRQRDEVEKSLRHETTKLPFDIDYSNVKGLSNEVVAKLNDAKPESIGMAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA++LLL+Y+KK+ + Sbjct: 603 RISGITPAAISLLLVYLKKHGL 624 >gi|237729052|ref|ZP_04559533.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Citrobacter sp. 30_2] gi|226909674|gb|EEH95592.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Citrobacter sp. 30_2] Length = 629 Score = 811 bits (2095), Expect = 0.0, Method: Composition-based stats. Identities = 294/624 (47%), Positives = 397/624 (63%), Gaps = 6/624 (0%) Query: 1 MINRS-YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLV 59 M + +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV Sbjct: 1 MFYQDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLV 60 Query: 60 REIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDV 119 +E+DAL GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Sbjct: 61 KEVDALGGLMAKAIDHAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMI 120 Query: 120 IQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 Q V E + + V Q R VVLT GTFL G IHIG GR GD PS Sbjct: 121 FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPS 180 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQI 238 L + RLKTGTP R+D +TI + +Q +D + FSF+ D + RQ+ Sbjct: 181 IPLSRRLRELPLRVSRLKTGTPPRIDARTIDFSVLGQQNSDNPMPVFSFLGDASQHPRQM 240 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPE Sbjct: 241 PCYITHTNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQIFLEPE 300 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL ++ +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K Sbjct: 301 GLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENARIVRPGYAIEYDFFDPRDLKPTLESK 360 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I GLF AGQINGTTGYEEAAAQG++AG+N+AR S + + R +Y+GV++DDL + Sbjct: 361 FIQGLFFAGQINGTTGYEEAAAQGMLAGLNAARLSAEKEGWAPRRDQAYLGVLVDDLCTL 420 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYRMFTSRAEYR+ LR DNAD RLT IG +LG + + R RF + ++ R L Sbjct: 421 GTKEPYRMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLERIEQERQRL 480 Query: 479 KSLVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIE 534 KS + S+ ++ + + + L PD + L S+ A E Sbjct: 481 KSTWVNPLAESAAEVNAHLATPLSREASGEDLLRRPDMTYAQLTSLSAFAPALDDAQAAE 540 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ+ E + + E L+P DY + LSNE+ KL+ KP ++ Q Sbjct: 541 QVEIQVKYEGYIARQLEEIERQQRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPVSIGQ 600 Query: 595 ASKIEGMTPAALNLLLIYIKKNTV 618 AS+I G+TPAA+++LL+++KK + Sbjct: 601 ASRISGITPAAISILLVWLKKQGM 624 >gi|294501986|ref|YP_003565686.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus megaterium QM B1551] gi|295707337|ref|YP_003600412.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus megaterium DSM 319] gi|294351923|gb|ADE72252.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus megaterium QM B1551] gi|294804996|gb|ADF42062.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus megaterium DSM 319] Length = 629 Score = 811 bits (2095), Expect = 0.0, Method: Composition-based stats. Identities = 276/619 (44%), Positives = 390/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDVIVIG GHAGCEAA +A++GA T +T + M CNP++GG KG +VREIDA Sbjct: 7 QYDVIVIGAGHAGCEAALASARMGAKTLTLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ M++ + ++ENL ++QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFAYQHEMKKTLENEENLTLMQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + +V Q ++ + TVV+TTGTFLRG I +G+LK +G P+ L Sbjct: 127 EQLIVEDGVCTGVVTQTGAVYKAKTVVITTGTFLRGEIILGELKYSSGPNNQQPAIKLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + D R KTGTP R++ TI + KTE Q D+ FS+ T + Q+ C +T Sbjct: 187 HLEELGLDMVRFKTGTPPRVNSSTIDYSKTEIQPGDDVPRAFSYETTQYITDQLPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ +TH+II +N+ S +YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSEQTHQIIDDNLHLSPMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE +Q Q + TIPGLEKV ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEHVQRQMLATIPGLEKVQMMRAGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+ R++ + + + R+D+YIGV++DDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLLAGINAGRRALEQEEVILGRSDAYIGVLVDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT IG +LG I + R +F + E + L S ++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEIGRELGLISDERYAKFEQKKAEIEQEKKRLFSFIIK 486 Query: 485 SKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + S +DG T + L P+ + ++ + P V E+++I+ Sbjct: 487 PNEAVQQLIKEAGGSELKDGIRAT--DLLRRPEMTYTHIHQLAPADETVDPEVAEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + + +K E + IP DY ++ L+ E ++KL+ ++P + QAS+I Sbjct: 545 VKYEGYIQKSLQQVERLKKLENKKIPDYIDYDAINGLATEARQKLNQVRPLTVAQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 605 GVNPADISILLVYIEQGRI 623 >gi|206558428|ref|YP_002229188.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia cenocepacia J2315] gi|238693058|sp|B4E581|MNMG_BURCJ RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|198034465|emb|CAR50330.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia cenocepacia J2315] Length = 656 Score = 811 bits (2095), Expect = 0.0, Method: Composition-based stats. Identities = 287/633 (45%), Positives = 387/633 (61%), Gaps = 15/633 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+ Sbjct: 2 LFPTEFDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DAL G M D +GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Sbjct: 62 EVDALGGAMAAATDESGIQFRILNSSKGPAVRATRAQADRILYKAAIRHRLENQPNLWLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + + V Q R VVLT GTFL G IH+G GR GD + Sbjct: 122 QQAVDDLMVEGDRVVGAVTQIGIRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAV 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITNRQ-I 238 SL + + GRLKTGTP R+DG+TI + K ++Q D IP FSF+ + Q + Sbjct: 182 SLSSRLKELKLPQGRLKTGTPPRIDGRTIDFSKLDEQPGDLDPIPVFSFLGRAEQHPQQL 241 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C +T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPE Sbjct: 242 PCWVTHTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPE 301 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL T+ YPNGIST+LP ++Q + + ++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 302 GLTTNEFYPNGISTSLPFDVQLELVHSMRGLENAHILRPGYAIEYDYFDPRALKASLETK 361 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I+GLF AGQINGTTGYEEAAAQGL+AG+N+ R + + C R +Y+GV++DDL ++ Sbjct: 362 AINGLFFAGQINGTTGYEEAAAQGLLAGLNAGRYVQEKEAWCPRRDQAYLGVLVDDLVTR 421 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 GV EPYRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F++ + L Sbjct: 422 GVAEPYRMFTSRAEYRLSLREDNADMRLTEIGRELGLVDDARWDAFSRKRDAVSRETERL 481 Query: 479 KSLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNL----------FSICPDA 525 KS +T K L +T++ K + E L P S + D Sbjct: 482 KSTWVTPKTLPAEEATALLGKAIDHEYSLAELLRRPGVSYDGVCGLKGGECGPAEPLTDD 541 Query: 526 RKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 + E+++I Y Y RQ E + E +P DY + LS E+ +KL+ Sbjct: 542 PVLLEQIKEQVEIGIKYQGYIERQASEIERNDANENTRLPDGIDYREVRGLSFEVSQKLN 601 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYIKKNTV 618 +P + QAS+I G+TPAA++LL++++K+ + Sbjct: 602 EFRPETIGQASRISGVTPAAISLLMVHLKRRGL 634 >gi|302185834|ref|ZP_07262507.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. syringae 642] Length = 630 Score = 811 bits (2094), Expect = 0.0, Method: Composition-based stats. Identities = 288/617 (46%), Positives = 385/617 (62%), Gaps = 5/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIRETLENQPNLWIFQQACD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 127 DLIVEQDQVRGVVTQMGMRIFADSVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ +K + + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGNKEQHPPQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 247 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R+I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVRSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCTKRESIELEEQRLKSTWVR 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +I+ L+ P+ +L SI V E+++I++ Sbjct: 487 PGTEQGDAIAAHFGTPLTHEYNLLNLLTRPEIDYASLISITGQGCT-DPQVAEQVEIKTK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E ++ E +P+D DY+++ LS E++ KL I +P L QAS+I G+ Sbjct: 546 YAGYIDRQQDEIARLRASEDTRLPEDIDYAAISGLSKEIQSKLGITRPETLGQASRIPGV 605 Query: 602 TPAALNLLLIYIKKNTV 618 TPAA++LL+I++KK Sbjct: 606 TPAAISLLMIHLKKRGA 622 >gi|119475231|ref|ZP_01615584.1| glucose-inhibited division protein A [marine gamma proteobacterium HTCC2143] gi|119451434|gb|EAW32667.1| glucose-inhibited division protein A [marine gamma proteobacterium HTCC2143] Length = 630 Score = 811 bits (2094), Expect = 0.0, Method: Composition-based stats. Identities = 297/626 (47%), Positives = 399/626 (63%), Gaps = 6/626 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +DVIVIGGGHAG EA +A++G T L+TH T+G MSCNPAIGG+GK HLVRE Sbjct: 3 FPDQFDVIVIGGGHAGTEACLASARMGCKTLLLTHNIETLGQMSCNPAIGGIGKSHLVRE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M R D+ GIQFR+LN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 63 IDALGGAMARATDSGGIQFRILNARKGPAVRATRAQADRVLYKAAIREILENQPNLSIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E + +S IV Q TV+L+TGTFL G IHIG GR GD PS + Sbjct: 123 QAVDDLIIEGDQVSGIVTQMGLKFFAPTVILSTGTFLGGKIHIGLDNHSGGRAGDPPSIT 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIEC 240 L + F+ RLKTGTP R+D +++ + E+Q+ D+ SF+ + Q C Sbjct: 183 LAERLRELPFNVDRLKTGTPPRIDARSVDFSDLEEQWGDKPEPVMSFLGSLSHHPEQTCC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH II + + S +Y+G I+ GPRYCPSIEDKI RF ++N HQIF+EPEGL Sbjct: 243 WITHTNEKTHEIIRQGLDRSPMYTGVIEGIGPRYCPSIEDKIHRFADKNSHQIFIEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T +YPNGIST+LP ++Q + +R+I G E+ +I RPGYAIEYDY +P++L +LETK I Sbjct: 303 KTHELYPNGISTSLPFDVQLELVRSIKGFEQAHIARPGYAIEYDYFDPRDLKYSLETKFI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQINGTTGYEEAAAQGL+AGIN+ K D C R ++YIGVMIDDL + G Sbjct: 363 KGLFFAGQINGTTGYEEAAAQGLLAGINAGLKVQGKDTWCPRRDEAYIGVMIDDLITMGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 +EPYRMFTSRAEYR+ LR DNAD RLT G +LG + + R K F++ + + L+S Sbjct: 423 MEPYRMFTSRAEYRLLLREDNADLRLTEKGRQLGVVDDDRWKIFSEKRESIDKEIKRLES 482 Query: 481 LVLTSKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 + K + ++ D + + + + P + ++ I K V E+++ Sbjct: 483 TWIQPKTVEGDIVNSLVDQAITREYSLKDLVKRPGVNYIDVAGIKGTVTK-DPQVAEQVE 541 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ YA Y GRQ E ++ E P DFDY S+ LSNE+KEKLS +P L +A++ Sbjct: 542 IQIKYAGYIGRQADEIARLRRHENTKFPNDFDYHSIEGLSNEVKEKLSKYRPETLARAAR 601 Query: 598 IEGMTPAALNLLLIYIKK-NTVKLNE 622 I G+TPAA++LLL+++KK ++ N+ Sbjct: 602 IPGVTPAAISLLLVFLKKYGALEKNK 627 >gi|78064752|ref|YP_367521.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia sp. 383] gi|123569642|sp|Q39KY9|MNMG_BURS3 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|77965497|gb|ABB06877.1| Glucose-inhibited division protein A subfamily [Burkholderia sp. 383] Length = 656 Score = 811 bits (2094), Expect = 0.0, Method: Composition-based stats. Identities = 285/633 (45%), Positives = 386/633 (60%), Gaps = 15/633 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+ Sbjct: 2 LFPTEFDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DAL G M D +GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Sbjct: 62 EVDALGGAMAAATDESGIQFRILNSSKGPAVRATRAQADRILYKAAIRHRLENQPNLWLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + + V Q R VVLT GTFL G IH+G GR GD + Sbjct: 122 QQAVDDLMVEGDRVVGAVTQIGIRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAV 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITNRQ-I 238 SL + + GRLKTGTP R+DG++I + + +Q D +P FSF+ + Q + Sbjct: 182 SLSSRLKELKLPQGRLKTGTPPRIDGRSIDFSQLTEQPGDLDPVPVFSFLGRAEQHPQQL 241 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C +T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPE Sbjct: 242 PCWVTHTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPE 301 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL T+ YPNGIST+LP ++Q + + ++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 302 GLTTNEFYPNGISTSLPFDVQLELVHSMRGLENAHILRPGYAIEYDYFDPRALKASLETK 361 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I+GLF AGQINGTTGYEEAAAQGL+AG+N+ R + D C R +Y+GV++DDL ++ Sbjct: 362 AINGLFFAGQINGTTGYEEAAAQGLLAGLNAGRYVQEKDAWCPRRDQAYLGVLVDDLVTR 421 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 GV EPYRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F++ + L Sbjct: 422 GVAEPYRMFTSRAEYRLSLREDNADMRLTEIGRELGLVDDTRWDAFSRKRDAVSRETERL 481 Query: 479 KSLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNL----------FSICPDA 525 KS +T K L +T++ K + E L P S + D Sbjct: 482 KSTWVTPKTLPPEEATALLGKAIDHEYSLAELLRRPGISYDGVCGLKGGECGPAEPLADD 541 Query: 526 RKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 + E+++I Y Y RQ E + E +P DY + LS E+ +KL+ Sbjct: 542 PVLLEQIKEQVEIGIKYQGYIERQASEIERNDANENTRLPDGIDYREVRGLSFEVSQKLN 601 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYIKKNTV 618 +P + QAS+I G+TPAA++LL++++K+ + Sbjct: 602 EFRPETIGQASRISGVTPAAISLLMVHLKRRGL 634 >gi|257485605|ref|ZP_05639646.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 631 Score = 811 bits (2094), Expect = 0.0, Method: Composition-based stats. Identities = 287/617 (46%), Positives = 385/617 (62%), Gaps = 5/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 8 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 68 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIRETLENQPNLWIFQQACD 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 128 DLIVEQDQVRGVVTQMGMRIFADSVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAQR 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ +K + + C IT Sbjct: 188 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGNKEQHPPQVSCWITH 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 248 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R+I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 308 LYPNGISTSLPFDVQLQIVRSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 368 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 428 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCTKRESIELEEQRLKSTWVR 487 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +I+ L+ P+ +L +I V E+++I++ Sbjct: 488 PGTEQGDAIAAHFGTPLTHEYNLLNLLTRPEIDYASLIAITGQGCT-DPQVAEQVEIKTK 546 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E ++ E +P+D DY+++ LS E++ KL I +P L QAS+I G+ Sbjct: 547 YAGYIDRQQDEIARLRASEDTRLPEDIDYAAISGLSKEIQSKLGITRPETLGQASRIPGV 606 Query: 602 TPAALNLLLIYIKKNTV 618 TPAA++LL+I++KK Sbjct: 607 TPAAISLLMIHLKKRGA 623 >gi|170731465|ref|YP_001763412.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia cenocepacia MC0-3] gi|205831493|sp|B1K1K2|MNMG_BURCC RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|169814707|gb|ACA89290.1| glucose inhibited division protein A [Burkholderia cenocepacia MC0-3] Length = 656 Score = 811 bits (2094), Expect = 0.0, Method: Composition-based stats. Identities = 288/633 (45%), Positives = 386/633 (60%), Gaps = 15/633 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+ Sbjct: 2 LFPTEFDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DAL G M D +GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Sbjct: 62 EVDALGGAMAAATDESGIQFRILNSSKGPAVRATRAQADRILYKAAIRHRLENQPNLWLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + + V Q R VVLT GTFL G IH+G GR GD + Sbjct: 122 QQAVDDLMVEGDRVVGAVTQIGIRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAV 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITNRQ-I 238 SL + + GRLKTGTP R+DG+TI + K ++Q D IP FSF+ + Q + Sbjct: 182 SLSSRLKELKLPQGRLKTGTPPRIDGRTIDFSKLDEQPGDLDPIPVFSFLGRAEQHPQQL 241 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C +T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPE Sbjct: 242 PCWVTHTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPE 301 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL T YPNGIST+LP ++Q + + ++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 302 GLTTHEFYPNGISTSLPFDVQLELVHSMRGLENAHILRPGYAIEYDYFDPRALKASLETK 361 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I+GLF AGQINGTTGYEEAAAQGL+AG+N+ R + D C R +Y+GV++DDL ++ Sbjct: 362 AINGLFFAGQINGTTGYEEAAAQGLLAGLNAGRYVQEKDAWCPRRDQAYLGVLVDDLVTR 421 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 GV EPYRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F++ + L Sbjct: 422 GVAEPYRMFTSRAEYRLSLREDNADMRLTEIGRELGLVDDARWDAFSRKRDAVSRETERL 481 Query: 479 KSLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNL----------FSICPDA 525 KS +T K L +T++ K + E L P S + D Sbjct: 482 KSTWVTPKTLPAEEATALLGKAIEHEYSLAELLRRPGVSYDGVCGLKGGECGPAEPLADD 541 Query: 526 RKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 + E+++I Y Y RQ E + E +P DY + LS E+ +KL+ Sbjct: 542 PVLLEQIKEQVEIGIKYQGYIERQASEIERNDANENTRLPDGIDYREVRGLSFEVSQKLN 601 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYIKKNTV 618 +P + QAS+I G+TPAA++LL++++K+ + Sbjct: 602 EFRPETIGQASRISGVTPAAISLLMVHLKRRGL 634 >gi|170699462|ref|ZP_02890505.1| glucose inhibited division protein A [Burkholderia ambifaria IOP40-10] gi|170135611|gb|EDT03896.1| glucose inhibited division protein A [Burkholderia ambifaria IOP40-10] Length = 656 Score = 811 bits (2094), Expect = 0.0, Method: Composition-based stats. Identities = 287/633 (45%), Positives = 386/633 (60%), Gaps = 15/633 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+ Sbjct: 2 LFPTEFDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DAL G M D +GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Sbjct: 62 EVDALGGAMAAATDESGIQFRILNSSKGPAVRATRAQADRILYKAAIRHRLENQPNLWLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + + V Q R VVLT GTFL G IH+G GR GD + Sbjct: 122 QQAVDDLMVEGDRVVGAVTQIGIRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAV 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITNRQ-I 238 SL + GRLKTGTP R+DG++I + K ++Q D IP FSF+ + Q + Sbjct: 182 SLSARLKELKLPQGRLKTGTPPRIDGRSIDFSKLDEQPGDLDPIPVFSFLGRAEQHPQQL 241 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C +T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPE Sbjct: 242 PCWVTHTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPE 301 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL T+ YPNGIST+LP ++Q + + ++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 302 GLTTNEFYPNGISTSLPFDVQLELVHSMRGLENAHILRPGYAIEYDYFDPRALKASLETK 361 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I+GLF AGQINGTTGYEEAAAQGL+AG+N+ R + D C R +Y+GV++DDL ++ Sbjct: 362 AINGLFFAGQINGTTGYEEAAAQGLLAGLNAGRYVQEKDAWCPRRDQAYLGVLVDDLVTR 421 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 GV EPYRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F++ + L Sbjct: 422 GVAEPYRMFTSRAEYRLSLREDNADMRLTEIGRELGLVDDARWDAFSRKRDAVSRETERL 481 Query: 479 KSLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNL----------FSICPDA 525 KS +T K L +T++ K + E L P S + D Sbjct: 482 KSTWVTPKTLPPEEATALLGKAIDHEYSLAELLRRPGISYDGVCGLKGGECGPAEPLADD 541 Query: 526 RKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 + E+++I Y Y RQ E + E +P DY + LS E+ +KL+ Sbjct: 542 PVLLEQIKEQVEIGIKYQGYIERQASEIERNDANENTRLPDGIDYREVRGLSFEVSQKLN 601 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYIKKNTV 618 +P + QAS+I G+TPAA++LL++++K+ + Sbjct: 602 EFRPETIGQASRISGVTPAAISLLMVHLKRRGL 634 >gi|167587941|ref|ZP_02380329.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia ubonensis Bu] Length = 656 Score = 811 bits (2094), Expect = 0.0, Method: Composition-based stats. Identities = 286/633 (45%), Positives = 386/633 (60%), Gaps = 15/633 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + +DVIV+GGGHAG EAA +A++G T L+TH T+G MSCNP+IGG+GKGHLV+ Sbjct: 2 LFPTEFDVIVVGGGHAGTEAALASARMGVKTLLLTHNIETLGQMSCNPSIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DAL G M D +GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Sbjct: 62 EVDALGGAMAAATDESGIQFRILNSSKGPAVRATRAQADRILYKAAIRHRLENQPNLWLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + + V Q R VVLT GTFL G IH+G GR GD + Sbjct: 122 QQAVDDLMVEGDRVVGAVTQIGIRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAV 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITNRQ-I 238 +L + + GRLKTGTP R+DG+TI + K E+Q D IP FSF+ + Q + Sbjct: 182 TLSSRLKELKLPQGRLKTGTPPRIDGRTIDFSKLEEQPGDLDPIPVFSFLGRAEQHPQQL 241 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C +T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPE Sbjct: 242 PCWVTHTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPE 301 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL T+ YPNGIST+LP ++Q + + ++ GLE+ +I+RPGYAIEYDY +P+ L +LETK Sbjct: 302 GLTTNEFYPNGISTSLPFDVQLELVHSMRGLEQAHILRPGYAIEYDYFDPRALKASLETK 361 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I+GLF AGQINGTTGYEEAAAQGL+AG+N+ + D C R +Y+GV++DDL ++ Sbjct: 362 AINGLFFAGQINGTTGYEEAAAQGLLAGVNAGLYVQEKDAWCPRRDQAYLGVLVDDLVTR 421 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 GV EPYRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F + + L Sbjct: 422 GVAEPYRMFTSRAEYRLSLREDNADMRLTEIGRELGLVDDVRWDAFCRKRDAVSRETERL 481 Query: 479 KSLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNL----------FSICPDA 525 KS +T K L +T++ K + E L P S + D Sbjct: 482 KSTWVTPKTLPADEATALLGKAIDHEYSLAELLRRPGVSYDGVCGLKGGECGPAEPLADD 541 Query: 526 RKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 + E+++I Y Y RQ E + E +P+ DY + LS E+ +KL+ Sbjct: 542 PVLLEQIKEQVEIGIKYQGYIERQANEIERNDANENTRLPEGIDYREVRGLSFEVSQKLN 601 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYIKKNTV 618 +P + QAS+I G+TPAA++LL++++K+ + Sbjct: 602 QFRPETIGQASRISGVTPAAISLLMVHLKRRGL 634 >gi|325275323|ref|ZP_08141276.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas sp. TJI-51] gi|324099571|gb|EGB97464.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas sp. TJI-51] Length = 630 Score = 811 bits (2094), Expect = 0.0, Method: Composition-based stats. Identities = 286/617 (46%), Positives = 382/617 (61%), Gaps = 5/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGHMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D +GIQFRVLN +KGPAVR R QADR +Y+ ++ + +Q NL + Q Sbjct: 67 GGAMALATDKSGIQFRVLNNRKGPAVRATRAQADRAIYKAVVREILENQPNLWIFQQSCD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q +VVLTTGTFL G+IHIG GR GD PS +L + Sbjct: 127 DLIVEQDQVKGVVTQMGLRFFAESVVLTTGTFLGGLIHIGLQNHSGGRAGDPPSIALAHR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SFM + ++ RQ+ C IT Sbjct: 187 MRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFMGNAEMHPRQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 247 TNARTHEIIASNLDRSPMYSGVIEGVGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q + +R+I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLELVRSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG I ++R F LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLIDDQRWAAFCAKRDGIEREEQRLKSTWVR 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +I K + L+ P+ L V E+++I + Sbjct: 487 PNTEQGQAIVDKFGTPLSHEYSLLNLLARPEIDYAGLIEATGG-EAIDPQVAEQVEIRTK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E ++ E +P D DY+++ LS E++ KL +P L QAS+I G+ Sbjct: 546 YAGYIDRQQDEIARLRASEDTRLPVDIDYTTISGLSKEIQGKLGQTRPETLGQASRIPGV 605 Query: 602 TPAALNLLLIYIKKNTV 618 TPAA++LLLI++KK Sbjct: 606 TPAAISLLLIHLKKRGA 622 >gi|320321681|gb|EFW77780.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. glycinea str. B076] gi|320331116|gb|EFW87087.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. glycinea str. race 4] Length = 631 Score = 810 bits (2093), Expect = 0.0, Method: Composition-based stats. Identities = 286/617 (46%), Positives = 385/617 (62%), Gaps = 5/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 8 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 68 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIRETLENQPNLWIFQQACD 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 128 DLIVEQDQVRGVVTQMGMRIFADSVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAQR 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ +K + + C IT Sbjct: 188 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGNKEQHPPQVSCWITH 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 248 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +++I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 308 LYPNGISTSLPFDVQLQIVQSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 368 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 428 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCTKRESIELEEQRLKSTWVR 487 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +I+ L+ P+ +L +I V E+++I++ Sbjct: 488 PGTAQGDAIAEHFGTPLTHEYNLLNLLTRPEIDYASLIAITGQGCT-DPQVAEQVEIKTK 546 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E ++ E +P+D DY+++ LS E++ KL I +P L QAS+I G+ Sbjct: 547 YAGYIDRQQDEIARLRASEDTRLPEDIDYAAISGLSKEIQSKLGITRPETLGQASRIPGV 606 Query: 602 TPAALNLLLIYIKKNTV 618 TPAA++LL+I++KK Sbjct: 607 TPAAISLLMIHLKKRGA 623 >gi|188535592|ref|YP_001909389.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Erwinia tasmaniensis Et1/99] gi|188030634|emb|CAO98530.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA (Glucose-inhibited division protein A) [Erwinia tasmaniensis Et1/99] Length = 629 Score = 810 bits (2093), Expect = 0.0, Method: Composition-based stats. Identities = 299/618 (48%), Positives = 390/618 (63%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIVIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLMG D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMGHAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLLVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGMDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +TI + Q D L FSFM D + RQ+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSVLAPQHGDTPLPVFSFMGDVSQHPRQVPCYITY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHEVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E IIRPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMHGMENAKIIRPGYAIEYDFFDPRDLKPTLESKYIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+ R S + R +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAGRLSADKESWAPRRDQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R RF + ++ R L+ + + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEAGRELGLVDDARWARFNEKLESIEQERQRLREIWVH 486 Query: 485 SKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 K+ ++ K + + L P+ + Q L ++ A + E+++I+ Sbjct: 487 PKSECVAEVNAVISAALTKEASGEDLLRRPEMTYQQLMTLTHFAPALADTQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E E L+P D DY + LSNE KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQEEIDRQLRNENTLLPTDLDYQQVSGLSNESIAKLNDSKPSSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LLIY+KK + Sbjct: 607 ITPAAISILLIYLKKQGL 624 >gi|331011893|gb|EGH91949.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 630 Score = 810 bits (2093), Expect = 0.0, Method: Composition-based stats. Identities = 287/617 (46%), Positives = 385/617 (62%), Gaps = 5/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIRETLENQPNLWIFQQACD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 127 DLIVEQDQVRGVVTQMGMRIFADSVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ +K + + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGNKEQHPPQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 247 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R+I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVRSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCTKRESIELEEQRLKSTWVR 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +I+ L+ P+ +L +I V E+++I++ Sbjct: 487 PGTEQGDAIAAHFGTPLTHEYNLLNLLTRPEIDYASLIAITGQGCT-DPQVAEQVEIKTK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E ++ E +P+D DY+++ LS E++ KL I +P L QAS+I G+ Sbjct: 546 YAGYIDRQQDEIARLRASEDTRLPEDIDYAAISGLSKEIQSKLGITRPETLGQASRIPGV 605 Query: 602 TPAALNLLLIYIKKNTV 618 TPAA++LL+I++KK Sbjct: 606 TPAAISLLMIHLKKRGA 622 >gi|229917462|ref|YP_002886108.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Exiguobacterium sp. AT1b] gi|229468891|gb|ACQ70663.1| glucose inhibited division protein A [Exiguobacterium sp. AT1b] Length = 628 Score = 810 bits (2093), Expect = 0.0, Method: Composition-based stats. Identities = 277/617 (44%), Positives = 386/617 (62%), Gaps = 4/617 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVIVIG GHAG EAA +A++GA TA++T +G M CNP+IGG KG +VREIDA Sbjct: 7 EFDVIVIGAGHAGIEAALASARMGAKTAMLTMNPDMVGFMYCNPSIGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR DA IQ ++LN KGPAVR R QAD+ Y+ M++ + + NL + Q V Sbjct: 67 LGGEMGRAIDATYIQMKMLNTSKGPAVRALRAQADKFQYQNHMKKVLEDEPNLLLRQALV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + +V S R V++TTGTF+RG I IG+L +G PS L Sbjct: 127 ERLLIEDGEVRGVVTNTGSEYRAKAVIVTTGTFMRGQIIIGELAYESGPNNQMPSVELSK 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 + D R KTGTP R+DGKTI + KTE Q DE FS+ + + QI C +T Sbjct: 187 HLEELGLDLVRFKTGTPPRIDGKTIDYSKTEIQPGDENPSFFSYTSTDLNPIEQIPCWLT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 T+ TH++I EN+ S +YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG +T+ Sbjct: 247 YTSERTHQLIDENLHRSPMYSGAIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRDTE 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G ST++PE++QHQ +RTIPGLE ++RPGYAIEYD + P +L+PTLETK + GL Sbjct: 307 EIYVQGFSTSMPEDVQHQMLRTIPGLENSEMMRPGYAIEYDAVVPTQLWPTLETKAVPGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGT+GYEEAA QG++AGIN+A K D + R+ +YIGV+IDDL +KG EP Sbjct: 367 FTAGQINGTSGYEEAAGQGIMAGINAACKVLGKDPVILDRSQAYIGVLIDDLVTKGTNEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RL+ IG ++G + E R + L SLV+ Sbjct: 427 YRLLTSRAEYRLLLRHDNADLRLSDIGYEIGLLSEDRHTHLNEKRVAIEKEVKRLASLVV 486 Query: 484 TSK---NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 N S+ + A L P+ S + L ++ P + S V E+++I+ Sbjct: 487 KPTPEVNAMLESVGAHPLKEATHANILLKRPEVSYEALMTVVPSTEELSYEVKEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y +Q+ + ++++ E++ IP++ DY ++ L+ E K+KL ++P ++ QAS+I G Sbjct: 547 KYEGYISKQLEQVEKMRRMEEKRIPENLDYDAIGGLATEAKQKLKQVRPLSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNT 617 + PA +++LL+YI++ Sbjct: 607 VNPADVSILLVYIEQGQ 623 >gi|312964009|ref|ZP_07778480.1| glucose inhibited division protein A [Pseudomonas fluorescens WH6] gi|311282044|gb|EFQ60654.1| glucose inhibited division protein A [Pseudomonas fluorescens WH6] Length = 630 Score = 810 bits (2093), Expect = 0.0, Method: Composition-based stats. Identities = 289/617 (46%), Positives = 386/617 (62%), Gaps = 5/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G+MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGAMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGVMAMATDKGGIQFRVLNSRKGPAVRATRAQADRILYKAAVRETLENQPNLWIFQQAAD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++++ +V Q +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 127 DLIVEQDVVKGVVTQMGLRFFAQSVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAKR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SFM K + Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQAGDTPIPVMSFMGSKEQHPKQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 247 TNAHTHEIIAANLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +++I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQIQIVQSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGKDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F K + LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCKKRESITLEEQRLKSTWVR 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +I+ K LS P+ L + + V E+++I++ Sbjct: 487 PGTEQGDAIAEKFGTPLTHEYNLLNLLSRPEIDYAGLVEVTGSGAE-DPQVAEQVEIKTK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E ++ E +P D DY+ + LS E++ KL I +P L QAS+I G+ Sbjct: 546 YAGYIDRQQDEIARLRASEDTKLPMDIDYTGISGLSKEIQSKLGITRPETLGQASRIPGV 605 Query: 602 TPAALNLLLIYIKKNTV 618 TPAA++LL+I++KK Sbjct: 606 TPAAISLLMIHLKKRGA 622 >gi|70733509|ref|YP_263284.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas fluorescens Pf-5] gi|81170572|sp|Q4K399|MNMG_PSEF5 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|68347808|gb|AAY95414.1| glucose inhibited division protein A [Pseudomonas fluorescens Pf-5] Length = 630 Score = 810 bits (2093), Expect = 0.0, Method: Composition-based stats. Identities = 288/617 (46%), Positives = 383/617 (62%), Gaps = 5/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++GA T L+TH T+G+MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIVIGGGHAGTEAALASARMGAKTLLLTHNVETLGAMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRILYKAAVREILENQPNLWIFQQAAD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 127 DLIVEQDQVRGVVTQMGLRFFAESVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ K + + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGSKEQHPPQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 247 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +++I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVQSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGANAALRAQGKDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F K + LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDVRWAAFCKKREGIAQEEQRLKSTWVR 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +I+ K LS P+ L + + V E+++I++ Sbjct: 487 PGTEQGDAIAQKFGTPLTHEYNLLNLLSRPEIDYAGLVEVTGQGAE-DPQVAEQVEIKTK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E ++ E +P D DYS + LS E++ KL +P L QAS+I G+ Sbjct: 546 YAGYIDRQQDEIARLRASEDTKLPVDIDYSGISGLSKEIQSKLGATRPETLGQASRIPGV 605 Query: 602 TPAALNLLLIYIKKNTV 618 TPAA++LL+I++KK Sbjct: 606 TPAAISLLMIHLKKRGA 622 >gi|15603350|ref|NP_246424.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pasteurella multocida subsp. multocida str. Pm70] gi|13431542|sp|P57945|MNMG_PASMU RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|12721869|gb|AAK03569.1| GidA [Pasteurella multocida subsp. multocida str. Pm70] Length = 629 Score = 810 bits (2093), Expect = 0.0, Method: Composition-based stats. Identities = 297/622 (47%), Positives = 395/622 (63%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +YDVIVIGGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLVRE Sbjct: 3 YTENYDVIVIGGGHAGTEAALAPARMGLKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVRE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDA+ GLM AD AGIQFR LN KGPAVR R QADR LYR A++ + +QENLD+ Q Sbjct: 63 IDAMGGLMATAADQAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRIALENQENLDIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 EV +++ + +V + V+LT GTFL G IHIG GR GD S Sbjct: 123 QEVTDIILDQDRVCGVVTKMGLKFHAKAVILTAGTFLSGKIHIGLENYTGGRAGDPASVM 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIEC 240 L + + + RLKTGTP R+D +TI + KQ DE+L FSFM + RQI C Sbjct: 183 LADRLRELNLRVDRLKTGTPPRIDARTIDFSVLAKQHGDEKLPVFSFMGSVDQHPRQIPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ERN HQI+LEPEGL Sbjct: 243 FITHTNEQTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFSERNSHQIYLEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 ++ +YPNGIST+LP ++Q + + ++ G+EK II+PGYAIEYDY +P++L PTLETK I Sbjct: 303 TSNEIYPNGISTSLPFDVQMKIVNSMKGMEKARIIKPGYAIEYDYFDPRDLKPTLETKSI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQINGTTGYEEAA QGL+AGIN+ + + R +YIGV++DDL + G Sbjct: 363 RGLFFAGQINGTTGYEEAAGQGLLAGINAGLFVQEKEAWFPRRDQAYIGVLVDDLCTLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYR+FTSRAEYR+ LR DNAD+RLTPI +LG I E+R RF + ++ R L+ Sbjct: 423 KEPYRVFTSRAEYRLLLREDNADSRLTPIAHQLGLIDEKRWARFNQKMENIELERQRLRQ 482 Query: 481 LVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERL 536 + L ++ + + + + + L P+ + Q L S+ P +E++ Sbjct: 483 IWLHPRSEYLDEANKVLGSPLVREASGEDLLRRPEMNYQILTSLTPFQPAMDDQEAVEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I Y Y Q E K E IP FDY+ + LSNE++ KL +P ++ QAS Sbjct: 543 EIAIKYQGYIEHQQEEIARQKRHESTAIPAHFDYTVVSGLSNEVRAKLEQHRPVSIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA+++LL+ +KK + Sbjct: 603 RISGVTPAAISILLVSLKKQGM 624 >gi|330881914|gb|EGH16063.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. glycinea str. race 4] Length = 630 Score = 810 bits (2092), Expect = 0.0, Method: Composition-based stats. Identities = 286/617 (46%), Positives = 385/617 (62%), Gaps = 5/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIRETLENQPNLWIFQQACD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 127 DLIVEQDQVRGVVTQMGMRIFADSVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ +K + + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGNKEQHPPQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 247 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +++I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVQSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCTKRESIELEEQRLKSTWVR 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +I+ L+ P+ +L +I V E+++I++ Sbjct: 487 PGTAQGDAIAEHFGTPLTHEYNLLNLLTRPEIDYASLIAITGQGCT-DPQVAEQVEIKTK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E ++ E +P+D DY+++ LS E++ KL I +P L QAS+I G+ Sbjct: 546 YAGYIDRQQDEIARLRASEDTRLPEDIDYAAISGLSKEIQSKLGITRPETLGQASRIPGV 605 Query: 602 TPAALNLLLIYIKKNTV 618 TPAA++LL+I++KK Sbjct: 606 TPAAISLLMIHLKKRGA 622 >gi|325525645|gb|EGD03419.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia sp. TJI49] Length = 656 Score = 810 bits (2092), Expect = 0.0, Method: Composition-based stats. Identities = 288/629 (45%), Positives = 385/629 (61%), Gaps = 15/629 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DA Sbjct: 6 EFDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D GIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q V Sbjct: 66 LGGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRILYKAAIRRRLENQPNLWLFQQAV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + V Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 126 DDLMVEGDRVVGAVTQIGIRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSA 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITNRQ-IECGI 242 + GRLKTGTP R+DG+TI + K E+Q D IP FSF+ + Q + C + Sbjct: 186 RLKELKLPQGRLKTGTPPRIDGRTIDFSKLEEQPGDLDPIPVFSFLGRAEQHPQQLPCWV 245 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPEGL T Sbjct: 246 THTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPEGLTT 305 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + YPNGIST+LP ++Q + + ++ GLE +I+RPGYAIEYDY +P+ L +LETK I+G Sbjct: 306 NEFYPNGISTSLPFDVQLELVHSMRGLENAHILRPGYAIEYDYFDPRALKASLETKAING 365 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AG+N+ R + D C R +Y+GV++DDL ++GV E Sbjct: 366 LFFAGQINGTTGYEEAAAQGLLAGLNAGRYVQEKDAWCPRRDQAYLGVLVDDLVTRGVAE 425 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F + + LK+ Sbjct: 426 PYRMFTSRAEYRLSLREDNADMRLTEIGRELGLVDDVRWDAFCRKRDAVSRETERLKTTW 485 Query: 483 LTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNL----------FSICPDARKFS 529 +T K L +T++ K + E L P + + D Sbjct: 486 VTPKTLPPEEATALLGKAIDHEYSLAELLRRPGITYDGVCGLKGGECGPAEPLADDPVLL 545 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 + + E+++I Y Y RQ E + E +P DY + LS E+ +KL+ +P Sbjct: 546 AQIKEQVEIGIKYQGYIERQATEIERNDANENTRLPDGIDYREVRGLSFEVSQKLNQFRP 605 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKKNTV 618 + QAS+I G+TPAA++LL++++K+ + Sbjct: 606 ETIGQASRISGVTPAAISLLMVHLKRRGL 634 >gi|312136219|ref|YP_004003557.1| glucose inhibited division protein a [Caldicellulosiruptor owensensis OL] gi|311776270|gb|ADQ05757.1| glucose inhibited division protein A [Caldicellulosiruptor owensensis OL] Length = 628 Score = 810 bits (2092), Expect = 0.0, Method: Composition-based stats. Identities = 273/614 (44%), Positives = 384/614 (62%), Gaps = 4/614 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDV V+G GHAG EAA +A+LG T + +IG+M CNP+IGG GKGHLVREIDA Sbjct: 7 EYDVAVVGAGHAGIEAALASARLGLKTIIFAINLDSIGNMPCNPSIGGTGKGHLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ ADA IQ R+LN KGPAV R Q DR YRL M+R + +QENLD+ Q EV Sbjct: 67 LGGEMGKAADATAIQVRILNRAKGPAVYSLRAQCDRYRYRLYMKRVLENQENLDIRQAEV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + + ++ VVL TGTFL G + IG+ +G G P+ L Sbjct: 127 CDVLVEDGRVKGVKITTGAIFLAKAVVLATGTFLGGKVIIGQTIFDSGPDGMHPARYLTE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNRQIECGIT 243 + K + R KTGTPAR+ +++ + + + Q D + +PFSF D Q+ C +T Sbjct: 187 NLKKLGIEMMRFKTGTPARVHRRSLDFSQMQIQPGDLKPLPFSFENEDNFNIEQVPCYLT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 T ETH+II EN+ + +++G I GPRYCPSIEDKIVRF ++ HQ+F+EP GL+TD Sbjct: 247 YTTEETHKIIRENLHRAPLFTGIISGVGPRYCPSIEDKIVRFADKPRHQVFIEPTGLDTD 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G+ST+LPE++Q + R++ GLE V I+RP YAIEYD INP +L PTL+ KKI GL Sbjct: 307 EMYVQGMSTSLPEDVQIKMYRSVIGLENVKIMRPAYAIEYDCINPIQLEPTLQFKKIKGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGT+GYEEAAAQG++AGIN+A + + R+ +YIGV+IDDL +KG EP Sbjct: 367 FSAGQINGTSGYEEAAAQGIIAGINAAMYVKGKEMLVLDRSQAYIGVLIDDLVTKGTNEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT IG K+G + +R ++F + + + +K+ V+ Sbjct: 427 YRIMTSRAEYRLILRQDNADLRLTEIGYKIGLVSSQRYEKFLQKKKMIEDEINRVKNTVI 486 Query: 484 TSKNLSSTSISFKQDGKTRT---AYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + + K T + L P+ S ++L I PD V + ++IE Sbjct: 487 APSEKVNKFLQEKGSSPISTGVKLSDLLKRPELSYEDLKEIDPDRPDLPWYVQDEVEIEI 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y +Q+ + ++ K E + IP DY+ + LS E K+KLS ++P ++ QAS+I G Sbjct: 547 KYEGYIKKQLAQIEQFKKLENKKIPDWVDYNQILGLSTEAKQKLSQIRPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIK 614 ++PA +++LLI+++ Sbjct: 607 VSPADISVLLIWLE 620 >gi|54310653|ref|YP_131673.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Photobacterium profundum SS9] gi|81170567|sp|Q6LLF7|MNMG_PHOPR RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|46915096|emb|CAG21871.1| Putative glucose inhibited division protein A [Photobacterium profundum SS9] Length = 629 Score = 810 bits (2092), Expect = 0.0, Method: Composition-based stats. Identities = 288/622 (46%), Positives = 393/622 (63%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 ++DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 YQENFDVIVVGGGHAGTEAALAAARMGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DAL GLM + D GIQFR LN KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 63 VDALGGLMAKATDKGGIQFRTLNSSKGPAVRATRAQADRALYKAAVREVLENQPNLMLFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E + + +V + R ++VVLT GTFL G IHIG GR GD PS + Sbjct: 123 QAVDDLIVENDRVIGVVTEMGLKFRATSVVLTVGTFLGGKIHIGLENYSGGRAGDPPSIA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIEC 240 L + + F RLKTGTP R+D +T+ + + + Q D + FSFM + RQI C Sbjct: 183 LASRLRELPFRVDRLKTGTPPRIDARTVDFSRLQAQHGDNPIPTFSFMGKTSDHPRQIPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH +I N+ S +YSG I+ GPRYCPSIEDK++RF ++N HQIF+EPEGL Sbjct: 243 YITYTNEKTHDVIRNNLDRSPMYSGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T +YPNGIST+LP ++Q Q +R++ G E I+RPGYAIEYD+ +P++L T ETK I Sbjct: 303 TTHELYPNGISTSLPFDVQIQIVRSMDGFENAAIMRPGYAIEYDFFDPRDLKQTFETKFI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQINGTTGYEEAAAQGL+AG+N+A +S + C R +Y+GV+IDDL++ G Sbjct: 363 DGLFFAGQINGTTGYEEAAAQGLLAGMNAALQSQGKEGWCPRRDQAYMGVLIDDLSTMGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT IG + G + + R RF + ++ R LK Sbjct: 423 KEPYRMFTSRAEYRLLLREDNADLRLTEIGREFGLVDDDRWARFNQKVENIEQERQRLKD 482 Query: 481 LVLTSKNLSSTSIS---FKQDGKTRTAYEFLSYPDFSIQNLFSICPDARK-FSSLVIERL 536 + + + I+ + + L P+ + + L + + + E++ Sbjct: 483 IWINPNSDHVDEINKILKTPIAREANGEDLLRRPEITYKLLTQLEDFSPAHIDTQASEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y Y RQ E ++ E +P D +YS + LSNE+ KL+ KP + AS Sbjct: 543 EIQVKYQGYIDRQKDEVEKSLRHETTKLPFDLEYSIVKGLSNEVIAKLTDAKPETIGMAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA++LLL+Y+KK+ + Sbjct: 603 RISGITPAAISLLLVYLKKHGM 624 >gi|304398008|ref|ZP_07379883.1| glucose inhibited division protein A [Pantoea sp. aB] gi|304354294|gb|EFM18666.1| glucose inhibited division protein A [Pantoea sp. aB] Length = 629 Score = 810 bits (2092), Expect = 0.0, Method: Composition-based stats. Identities = 292/624 (46%), Positives = 391/624 (62%), Gaps = 6/624 (0%) Query: 1 MINRS-YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLV 59 M + +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV Sbjct: 1 MFYQDPFDVIVIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLV 60 Query: 60 REIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDV 119 +E+DAL GLM D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Sbjct: 61 KEVDALGGLMASAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMI 120 Query: 120 IQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 Q V E + + V Q R TVVLT GTFL G IHIG GR GD PS Sbjct: 121 FQQAVDDLIVENDRVVGAVTQMGLKFRAKTVVLTVGTFLDGKIHIGLDNYSGGRAGDPPS 180 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-I 238 L RLKTGTP R+D +TI + Q D+ + FSFM + + Q + Sbjct: 181 IPLAKRLRALPLRVNRLKTGTPPRIDARTIDFSVLSPQHGDDPMPVFSFMGNASQHPQQV 240 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPE Sbjct: 241 PCWITHTNEKTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNSHQIFLEPE 300 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL ++ +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K Sbjct: 301 GLTSNEIYPNGISTSLPFDVQIQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESK 360 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I GLF AGQINGTTGYEEAAAQG++AG+N+AR+S + R +Y+GV++DDL + Sbjct: 361 FIHGLFFAGQINGTTGYEEAAAQGMLAGLNAARQSADKEGWAPRRDQAYLGVLVDDLCTL 420 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYRMFTSRAEYR+ LR DNAD RLT G +LG + + R RF + ++ R L Sbjct: 421 GTKEPYRMFTSRAEYRLMLREDNADLRLTETGRELGLVDDARWARFNEKLEAIEQERQRL 480 Query: 479 KSLVLTSKNLSSTSIS---FKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIE 534 + + + K+ T ++ K + + L P+ + L ++ E Sbjct: 481 RDIWVHPKSEHVTEVNTVLSAPLTKEASGEDLLRRPELTYLKLMTLDAFGPALADEQAAE 540 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E E L+P + DY + LSNE+ KL+ KP ++ Q Sbjct: 541 QVEIQVKYEGYIARQQEEIDRQLRNENTLLPVELDYRHVNGLSNEVIAKLNDHKPVSIGQ 600 Query: 595 ASKIEGMTPAALNLLLIYIKKNTV 618 A++I G+TPAA+++LLIY+KK + Sbjct: 601 ATRISGITPAAISILLIYLKKQGL 624 >gi|330876347|gb|EGH10496.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 630 Score = 810 bits (2092), Expect = 0.0, Method: Composition-based stats. Identities = 289/617 (46%), Positives = 386/617 (62%), Gaps = 5/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M + D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAKATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIRETLENQPNLWIFQQACD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 127 DLIVEQDQVRGVVTQMGLRILADSVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ K + Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGSKEQHPAQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 247 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R+I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVRSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCTKRESIELEEQRLKSTWVR 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +IS L+ P+ +L ++ LV E+++I++ Sbjct: 487 PGTEQGDAISAHFGTPLTHEYNLLNLLTRPEIDYNSLIALTGQGCT-DPLVAEQVEIKTK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E ++ E +P+D DY+ + LS E++ KL I +P L QAS+I G+ Sbjct: 546 YAGYIDRQQDEIARLRASEDTRLPEDIDYTGISGLSKEIQSKLGITRPETLGQASRIPGV 605 Query: 602 TPAALNLLLIYIKKNTV 618 TPAA++LL+I++KK Sbjct: 606 TPAAISLLMIHLKKRGA 622 >gi|38257761|sp|Q9F5X1|MNMG_PSEU2 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|10764670|gb|AAG22815.1|AF302083_1 GidA [Pseudomonas syringae pv. syringae] Length = 631 Score = 810 bits (2092), Expect = 0.0, Method: Composition-based stats. Identities = 287/617 (46%), Positives = 385/617 (62%), Gaps = 5/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 8 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 68 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIRETLENQPNLWIFQQACD 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 +++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 128 DLIVDQDQVRGVVTQMGMRIFADSVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAQR 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ +K + + C IT Sbjct: 188 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGNKEQHPPQVSCWITH 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 248 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R+I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 308 LYPNGISTSLPFDVQLQIVRSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 368 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 428 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCIKRESIELEEQRLKSTWVR 487 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +I+ L+ P+ +L SI V E+++I++ Sbjct: 488 PGTEQGDAIAAHFGTPLTHEYNLLNLLTRPEIDYASLISITGQGCT-DPQVAEQVEIKTK 546 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E ++ E +P+D DY+++ LS E++ KL I +P L QAS+I G+ Sbjct: 547 YAGYIDRQQDEIARLRASEDTRLPEDIDYAAISGLSKEIQSKLGITRPETLGQASRIPGV 606 Query: 602 TPAALNLLLIYIKKNTV 618 TPAA++LL+I++KK Sbjct: 607 TPAAISLLMIHLKKRGA 623 >gi|134294225|ref|YP_001117960.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia vietnamiensis G4] gi|166222919|sp|A4JA22|MNMG_BURVG RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|134137382|gb|ABO53125.1| glucose inhibited division protein A [Burkholderia vietnamiensis G4] Length = 656 Score = 810 bits (2092), Expect = 0.0, Method: Composition-based stats. Identities = 287/633 (45%), Positives = 387/633 (61%), Gaps = 15/633 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+ Sbjct: 2 LFPTEFDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DAL G M D +GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Sbjct: 62 EVDALGGAMAAATDESGIQFRILNSSKGPAVRATRAQADRILYKAAIRHRLENQPNLWLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + + V Q R VVLT GTFL G IH+G GR GD + Sbjct: 122 QQAVDDLMVEGDRVVGAVTQIGIRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAV 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITNRQ-I 238 SL + GRLKTGTP R+DG++I + K ++Q D IP FSF+ + Q + Sbjct: 182 SLSARLKELKLPQGRLKTGTPPRIDGRSIDFSKLDEQPGDLDPIPVFSFLGRAEQHPQQL 241 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C +T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPE Sbjct: 242 PCWVTHTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPE 301 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL T+ YPNGIST+LP ++Q + + ++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 302 GLTTNEFYPNGISTSLPFDVQLELVHSMRGLENAHILRPGYAIEYDYFDPRALKASLETK 361 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I+GLF AGQINGTTGYEEAAAQGL+AG+N+ R + D C R +Y+GV++DDL ++ Sbjct: 362 AINGLFFAGQINGTTGYEEAAAQGLLAGLNAGRYVQEKDAWCPRRDQAYLGVLVDDLVTR 421 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 GV EPYRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F++ + L Sbjct: 422 GVAEPYRMFTSRAEYRLSLREDNADMRLTEIGRELGLVDDVRWDAFSRKRDAVSRETERL 481 Query: 479 KSLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----------CPDA 525 KS +T K L +T++ K + E L P S + + D Sbjct: 482 KSTWVTPKTLPPEEATALLGKPIDHEYSLAELLRRPGISYDGVCGLKGGECGPVEPLADE 541 Query: 526 RKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 + E+++I Y Y RQ E + E +P DY + LS E+ +KL+ Sbjct: 542 PVLLGQIKEQVEIGIKYQGYIERQANEIERNDANENTRLPDGIDYREVRGLSFEVSQKLN 601 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYIKKNTV 618 +P + QAS+I G+TPAA++LL++++K+ + Sbjct: 602 EFRPETIGQASRISGVTPAAISLLMVHLKRRGL 634 >gi|330898614|gb|EGH30033.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. japonica str. M301072PT] Length = 630 Score = 810 bits (2092), Expect = 0.0, Method: Composition-based stats. Identities = 288/617 (46%), Positives = 385/617 (62%), Gaps = 5/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIRETLENQPNLWIFQQACD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 127 DLIVEQDQVRGVVTQMGMRIFAESVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ +K + + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGNKEQHPPQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 247 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +++I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVQSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A +S D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGTNAALRSQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCTKRESIELEEQRLKSTWVR 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +I+ L+ P+ +L SI V E+++I++ Sbjct: 487 PGTEQGDAIAAHFGTPLTHEYNLLNLLTRPEIDYASLISITGQGC-IDPQVAEQVEIKTK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E ++ E +P+D DY+++ LS E++ KL I +P L QAS+I G+ Sbjct: 546 YAGYIDRQQDEIARLRASEDTGLPEDIDYAAISGLSKEIQSKLGITRPQTLGQASRIPGV 605 Query: 602 TPAALNLLLIYIKKNTV 618 TPAA++LL+I++KK Sbjct: 606 TPAAISLLMIHLKKRGA 622 >gi|221214301|ref|ZP_03587273.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia multivorans CGD1] gi|221165956|gb|EED98430.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia multivorans CGD1] Length = 656 Score = 810 bits (2092), Expect = 0.0, Method: Composition-based stats. Identities = 289/629 (45%), Positives = 386/629 (61%), Gaps = 15/629 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DA Sbjct: 6 EFDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D AGIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q V Sbjct: 66 LGGAMAAATDEAGIQFRILNSSKGPAVRATRAQADRILYKAAIRRRLENQPNLWLFQQAV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + V Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 126 DDLMVEGDRVVGAVTQIGIRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSA 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITNRQ-IECGI 242 + GRLKTGTP R+DG+TI + K E+Q D IP FSF+ + Q + C + Sbjct: 186 RLKELKLPQGRLKTGTPPRIDGRTIDFSKLEEQPGDLDPIPVFSFLGRAEQHPQQLPCWV 245 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPEGL T Sbjct: 246 THTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPEGLTT 305 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + YPNGIST+LP ++Q + + ++ GLE+ +I+RPGYAIEYDY +P+ L +LETK I+G Sbjct: 306 NEFYPNGISTSLPFDVQLELVHSMRGLEQAHILRPGYAIEYDYFDPRALKASLETKAING 365 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AG+N+ R + D C R +Y+GV++DDL ++GV E Sbjct: 366 LFFAGQINGTTGYEEAAAQGLLAGVNAGRYVQEKDAWCPRRDQAYLGVLVDDLVTRGVAE 425 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F + + LK+ Sbjct: 426 PYRMFTSRAEYRLSLREDNADMRLTEIGRELGLVDDVRWDAFCRKRDAVSRETERLKTTW 485 Query: 483 LTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNL----------FSICPDARKFS 529 +T K L +T++ K + E L P + D Sbjct: 486 VTPKTLPPEEATALLGKPIDHEYSLAELLRRPGVDYDGVCGLKGGDCGPAEPLADDPVLL 545 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 + + E+++I Y Y RQ E + E +P DY + LS E+ +KL+ +P Sbjct: 546 AQIKEQVEIGIKYQGYIERQATEIERNDANENTRLPDGIDYREVRGLSFEVSQKLNQFRP 605 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKKNTV 618 + QAS+I G+TPAA++LL++++K+ + Sbjct: 606 ETIGQASRISGVTPAAISLLMVHLKRRGL 634 >gi|302872909|ref|YP_003841545.1| glucose inhibited division protein A [Caldicellulosiruptor obsidiansis OB47] gi|302575768|gb|ADL43559.1| glucose inhibited division protein A [Caldicellulosiruptor obsidiansis OB47] Length = 627 Score = 810 bits (2092), Expect = 0.0, Method: Composition-based stats. Identities = 279/614 (45%), Positives = 382/614 (62%), Gaps = 4/614 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDV V+G GHAG EAA +A+LG T + +IG+M CNP+IGG GKGHLVREIDA Sbjct: 7 EYDVAVVGAGHAGIEAALASARLGLKTIIFAINLDSIGNMPCNPSIGGTGKGHLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ ADA IQ R+LN KGPAV R Q DR YRL M+R + SQENLDV QGEV Sbjct: 67 LGGEMGKAADATAIQVRILNRAKGPAVYSLRAQCDRSRYRLYMKRVLESQENLDVRQGEV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + + + ++ VVL TGTFL G I IG+ G G P+ L Sbjct: 127 CEVLVRDGRVKGVKITTGAIFLAKAVVLATGTFLGGRIIIGETVYDGGPDGMHPARYLTE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK-ITNRQIECGIT 243 + K + R KTGTPAR+ K++ + K + Q D R +PFSF + Q+ C +T Sbjct: 187 NLKKLGIEMMRFKTGTPARVHRKSLDFSKMQIQPGDLRPLPFSFENEDSFNIEQVPCYLT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 T ETHRII EN+ + +++G I GPRYCPSIEDKIVRF ++ HQ+F+EP GL+TD Sbjct: 247 YTTEETHRIIRENLHRAPLFTGLISGVGPRYCPSIEDKIVRFADKPRHQVFIEPTGLDTD 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G+ST+LPE++Q + R++ GLE V I+RP YAIEYD INP +L PTL+ KKI GL Sbjct: 307 EMYVQGMSTSLPEDVQIKMYRSVIGLENVKIMRPAYAIEYDCINPLQLEPTLQFKKIKGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGT+GYEEAAAQG++AGIN+A + + R+ +YIGV+IDDL +KG EP Sbjct: 367 FSAGQINGTSGYEEAAAQGIIAGINAAMYVKGKEMLVLDRSQAYIGVLIDDLVTKGTNEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT IG K+G + +R ++F + + + +K+ V+ Sbjct: 427 YRIMTSRAEYRLILRQDNADLRLTEIGYKIGLVSSQRYEKFLQKKKMIEDEINRVKNTVI 486 Query: 484 TSKNLSSTSISFKQDGKTRT---AYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + + K T + L P+ S ++L I P V + ++IE Sbjct: 487 APSEKVNKLLLGKGSSPITTGVKLSDLLKRPELSYEDLKDIDPARPDLPWYVKDEVEIEI 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y +Q+ + ++ K E + IP DYS + LS E K+KLS ++P ++ QAS+I G Sbjct: 547 KYEGYIKKQLAQVEQFKKLENKKIPDWVDYSQILGLSTEAKQKLSQIRPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIK 614 ++PA +++LLI+++ Sbjct: 607 VSPADISVLLIWLE 620 >gi|289649110|ref|ZP_06480453.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. aesculi str. 2250] Length = 631 Score = 810 bits (2092), Expect = 0.0, Method: Composition-based stats. Identities = 285/617 (46%), Positives = 384/617 (62%), Gaps = 5/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 8 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 68 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIRETLENQPNLWIFQQACD 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 128 DLIVEQDQVRGVVTQMGMRIFADSVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAQR 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ K + + C IT Sbjct: 188 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGSKEQHPPQVSCWITH 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 248 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +++I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 308 LYPNGISTSLPFDVQLQIVQSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 368 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 428 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCTKRESIELEEQRLKSTWVR 487 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +I+ L+ P+ +L ++ V E+++I++ Sbjct: 488 PGTAQGDAIAEHFGTPLTHEYNLLNLLTRPEIDYASLIALTGQGCT-DPQVAEQVEIKTK 546 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E ++ E +P+D DY+++ LS E++ KL I +P L QAS+I G+ Sbjct: 547 YAGYIDRQQDEIARLRASEDTRLPEDIDYAAISGLSKEIQSKLGITRPETLGQASRIPGV 606 Query: 602 TPAALNLLLIYIKKNTV 618 TPAA++LL+I++KK Sbjct: 607 TPAAISLLMIHLKKRGA 623 >gi|66048356|ref|YP_238197.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. syringae B728a] gi|63259063|gb|AAY40159.1| Glucose-inhibited division protein A subfamily [Pseudomonas syringae pv. syringae B728a] gi|330970319|gb|EGH70385.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. aceris str. M302273PT] Length = 630 Score = 809 bits (2091), Expect = 0.0, Method: Composition-based stats. Identities = 287/617 (46%), Positives = 385/617 (62%), Gaps = 5/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIRETLENQPNLWIFQQACD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 +++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 127 DLIVDQDQVRGVVTQMGMRIFADSVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ +K + + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGNKEQHPPQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 247 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R+I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVRSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCIKRESIELEEQRLKSTWVR 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +I+ L+ P+ +L SI V E+++I++ Sbjct: 487 PGTEQGDAIAAHFGTPLTHEYNLLNLLTRPEIDYASLISITGQGCT-DPQVAEQVEIKTK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E ++ E +P+D DY+++ LS E++ KL I +P L QAS+I G+ Sbjct: 546 YAGYIDRQQDEIARLRASEDTRLPEDIDYAAISGLSKEIQSKLGITRPETLGQASRIPGV 605 Query: 602 TPAALNLLLIYIKKNTV 618 TPAA++LL+I++KK Sbjct: 606 TPAAISLLMIHLKKRGA 622 >gi|71734446|ref|YP_277291.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. phaseolicola 1448A] gi|123634469|sp|Q48BF4|MNMG_PSE14 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|71554999|gb|AAZ34210.1| glucose-inhibited division protein A [Pseudomonas syringae pv. phaseolicola 1448A] Length = 630 Score = 809 bits (2091), Expect = 0.0, Method: Composition-based stats. Identities = 285/617 (46%), Positives = 385/617 (62%), Gaps = 5/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIRETLENQPNLWIFQQACD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 127 DLIVEQDQVRGVVTQMGMRIFADSVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ +K + + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGNKEQHPPQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 247 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +++I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVQSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCTKRESIELEEQRLKSTWVR 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +I+ L+ P+ +L +I V E+++I++ Sbjct: 487 PGTAQGDAIAEHFGTPLTHEYNLLNLLTRPEIDYASLIAITGQGCT-DPQVAEQVEIKTK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y+ Y RQ E ++ E +P+D DY+++ LS E++ KL I +P L QAS+I G+ Sbjct: 546 YSGYIDRQQDEIARLRASEDTRLPEDIDYAAISGLSKEIQSKLGITRPETLGQASRIPGV 605 Query: 602 TPAALNLLLIYIKKNTV 618 TPAA++LL+I++KK Sbjct: 606 TPAAISLLMIHLKKRGA 622 >gi|229593492|ref|YP_002875611.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas fluorescens SBW25] gi|229365358|emb|CAY53744.1| glucose inhibited division protein A [Pseudomonas fluorescens SBW25] Length = 631 Score = 809 bits (2091), Expect = 0.0, Method: Composition-based stats. Identities = 289/617 (46%), Positives = 386/617 (62%), Gaps = 5/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G+MSCNPAIGG+GK HLV+EIDAL Sbjct: 8 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGAMSCNPAIGGIGKSHLVKEIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 68 GGVMAMATDKGGIQFRVLNSRKGPAVRATRAQADRILYKAAVRETLENQPNLWIFQQAAD 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 128 DLIVEQDQVRGVVTQMGLRFLAESVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAKR 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SFM K + Q+ C IT Sbjct: 188 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQAGDTPIPVMSFMGSKEQHPKQVSCWITH 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 248 TNARTHEIIAANLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +++I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 308 LYPNGISTSLPFDVQIQIVQSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 368 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGKDSWCPRRDEAYIGVLVDDLITLGTQEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R + F K + LKS + Sbjct: 428 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWEAFCKKRESITLEEQRLKSTWVR 487 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +I+ K LS P+ L + + V E+++I++ Sbjct: 488 PGTEQGDAIAEKFGTPLTHEYNLLNLLSRPEIDYAGLVEVTGQGAE-DPQVAEQVEIKTK 546 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E ++ E +P D DY+ + LS E++ KL I +P L QAS+I G+ Sbjct: 547 YAGYIDRQQDEIARLRASEDTKLPTDIDYTGISGLSKEIQSKLGITRPQTLGQASRIPGV 606 Query: 602 TPAALNLLLIYIKKNTV 618 TPAA++LL+I++KK Sbjct: 607 TPAAISLLMIHLKKRGA 623 >gi|229000272|ref|ZP_04159841.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus mycoides Rock3-17] gi|228759604|gb|EEM08581.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus mycoides Rock3-17] Length = 629 Score = 809 bits (2091), Expect = 0.0, Method: Composition-based stats. Identities = 281/619 (45%), Positives = 394/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEA AA++G+ T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAGLAAARMGSKTLMLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ +++ I NL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFSYQHELKKTIEETPNLTLRQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ ++ Q + TVV+TTGTFLRG I +G LK +G PS +L Sbjct: 127 ERLIVEDDVCKGVITQSGAEYTAETVVITTGTFLRGEIIMGDLKYSSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q DE+ FSF T K QI C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSNTIDYSKTEIQPGDEKPRAFSFETTKFIMDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETHR+I N+ SA+YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSEETHRLIDRNLHRSAMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q + ++TIPGLE V ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQREMLKTIPGLENVEMMRTGYAIEYDAIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QG++AGIN+A +S + R+D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGIMAGINAACRSLGKKEVILGRSDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT IG ++G I E R RF ++ + L+S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEIGQEIGLIPEERYGRFTVKKEQIEQEKLRLESIIIK 486 Query: 485 S-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + S S +DG A + L P+ + +++ + P + + E+++I+ Sbjct: 487 PRPEVQELIRSVGGSELKDGIR--ASDLLRRPEMTYEHIRILAPSEVEIHDEIAEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + + +K E + IP D DY ++ +++E ++KL ++P ++ QAS+I Sbjct: 545 IKYEGYIEKSLQQVERMKKMESKKIPVDIDYDAISGIASEARQKLKDVRPLSMGQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 605 GVNPADISILLVYIEQGKI 623 >gi|251793666|ref|YP_003008396.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Aggregatibacter aphrophilus NJ8700] gi|247535063|gb|ACS98309.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Aggregatibacter aphrophilus NJ8700] Length = 629 Score = 809 bits (2091), Expect = 0.0, Method: Composition-based stats. Identities = 294/619 (47%), Positives = 392/619 (63%), Gaps = 5/619 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIGGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLVREIDA Sbjct: 6 TYDVIVIGGGHAGTEAALAPARMGLKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVREIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 + GLM AD AGIQFR LN KGPAVR R Q DR LYR A++ + +Q NLD+ Q EV Sbjct: 66 MGGLMATAADQAGIQFRTLNSSKGPAVRATRAQVDRVLYRQAVRIALENQPNLDIFQQEV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + E++ + +V + +V+LT GTFL G IHIG GR GD S +L Sbjct: 126 SDILIEQDRATGVVTKMGLKFHAKSVILTAGTFLDGKIHIGLENYTGGRAGDPSSITLAQ 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 + RLKTGTP R+D +TI + +Q D +L FSFM + RQI C IT Sbjct: 186 RLRDLNLRVDRLKTGTPPRIDARTIDFSVLAEQHGDAQLPVFSFMGSVDQHPRQIPCFIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL T+ Sbjct: 246 HTNEKTHEVIRNNLDRSPMYTGVIEGIGPRYCPSIEDKVMRFADRNSHQIYLEPEGLTTN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q + ++ GLE II+PGYAIEYDY +P++L TLETK I GL Sbjct: 306 EIYPNGISTSLPFDVQMGIVNSMKGLENARIIKPGYAIEYDYFDPRDLKLTLETKSIQGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAA+QGL+AGIN+ + + R +Y+GV++DDL + G EP Sbjct: 366 FFAGQINGTTGYEEAASQGLLAGINAGLYVQEKEAWFPRRDQAYMGVLVDDLCTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+FTSRAEYR+ LR DNAD RLTPI +LG I E R RF + ++ R L+S+ L Sbjct: 426 YRVFTSRAEYRLLLREDNADIRLTPIAHELGLIDEARWARFNRKMENIEQERQRLRSIWL 485 Query: 484 TSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIE 539 ++ + + + + + L P+ + Q L ++ P IE++QI Sbjct: 486 HPRSEYLEEANQVLGSPLVREASGEDLLRRPEINYQILTALTPFQPPMADKEAIEQVQIA 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y Q E ++ K E IP FDYS + LSNE++ KL +P ++ QAS+I Sbjct: 546 IKYQGYIEHQQEEIEKQKRHENTAIPPHFDYSKVAGLSNEVRIKLEQHRPVSIGQASRIS 605 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+TPAA++++L+ +KK + Sbjct: 606 GITPAAISIILVNLKKQGM 624 >gi|289628220|ref|ZP_06461174.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|330870069|gb|EGH04778.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 630 Score = 809 bits (2091), Expect = 0.0, Method: Composition-based stats. Identities = 285/617 (46%), Positives = 384/617 (62%), Gaps = 5/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIRETLENQPNLWIFQQACD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 127 DLIVEQDQVRGVVTQMGMRIFADSVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ K + + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGSKEQHPPQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 247 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +++I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVQSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCTKRESIELEEQRLKSTWVR 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +I+ L+ P+ +L ++ V E+++I++ Sbjct: 487 PGTAQGDAIAEHFGTPLTHEYNLLNLLTRPEIDYASLIALTGQGCT-DPQVAEQVEIKTK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E ++ E +P+D DY+++ LS E++ KL I +P L QAS+I G+ Sbjct: 546 YAGYIDRQQDEIARLRASEDTRLPEDIDYAAISGLSKEIQSKLGITRPETLGQASRIPGV 605 Query: 602 TPAALNLLLIYIKKNTV 618 TPAA++LL+I++KK Sbjct: 606 TPAAISLLMIHLKKRGA 622 >gi|330976396|gb|EGH76453.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 630 Score = 809 bits (2091), Expect = 0.0, Method: Composition-based stats. Identities = 287/617 (46%), Positives = 385/617 (62%), Gaps = 5/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIRETLENQPNLWIFQQACD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 127 DLIVEQDQVRGVVTQMGMRIFAESVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ +K + + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGNKEQHPPQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 247 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +++I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVQSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCTKRESIELEEQRLKSTWVR 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +I+ L+ P+ +L SI V E+++I++ Sbjct: 487 PGTEQGDAIAAHFGTPLTHEYNLLNLLTRPEIDYASLISITGQGC-IDPQVAEQVEIKTK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E ++ E +P+D DY+++ LS E++ KL I +P L QAS+I G+ Sbjct: 546 YAGYIDRQQDEIARLRASEDTGLPEDIDYAAISGLSKEIQSKLGITRPQTLGQASRIPGV 605 Query: 602 TPAALNLLLIYIKKNTV 618 TPAA++LL+I++KK Sbjct: 606 TPAAISLLMIHLKKRGA 622 >gi|289677542|ref|ZP_06498432.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. syringae FF5] Length = 631 Score = 809 bits (2090), Expect = 0.0, Method: Composition-based stats. Identities = 287/617 (46%), Positives = 385/617 (62%), Gaps = 5/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 8 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 68 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIREILENQPNLWIFQQACD 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 128 DLIVEQDQVRGVVTQMGMRIFAESVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAQR 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ +K + + C IT Sbjct: 188 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGNKEQHPPQVSCWITH 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 248 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +++I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 308 LYPNGISTSLPFDVQLQIVQSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 368 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 428 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCTKRESIELEEQRLKSTWVR 487 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +I+ L+ P+ +L SI V E+++I++ Sbjct: 488 PGTEQGDAIAAHFGTPLTHEYNLLNLLTRPEIDYASLISITGQGC-IDPQVAEQVEIKTK 546 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E ++ E +P+D DY+++ LS E++ KL I +P L QAS+I G+ Sbjct: 547 YAGYIDRQQDEIARLRASEDTGLPEDIDYAAISGLSKEIQSKLGITRPQTLGQASRIPGV 606 Query: 602 TPAALNLLLIYIKKNTV 618 TPAA++LL+I++KK Sbjct: 607 TPAAISLLMIHLKKRGA 623 >gi|89092258|ref|ZP_01165212.1| glucose inhibited division protein A [Oceanospirillum sp. MED92] gi|89083346|gb|EAR62564.1| glucose inhibited division protein A [Oceanospirillum sp. MED92] Length = 631 Score = 809 bits (2090), Expect = 0.0, Method: Composition-based stats. Identities = 291/621 (46%), Positives = 396/621 (63%), Gaps = 5/621 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDVIVIGGGHAG EAA +A++GA T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 YDVIVIGGGHAGTEAALASARIGAKTLLLTHNIETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DG M R D GIQFR LN +KGPAVR R QADR LY+ A++ + +Q+NLD+ Q Sbjct: 67 DGAMARATDKGGIQFRTLNSRKGPAVRATRAQADRILYKAAIRHILENQDNLDIFQQSAD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 TE + +V Q ++VVLT GTFL GVIHIG GR GD PS +L + Sbjct: 127 DLITEGEAVRGVVTQTGIRFHANSVVLTAGTFLGGVIHIGLENHSGGRAGDPPSIALADR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + F RLKTGTP R+D +++ + ++Q D S+M + Q I C IT Sbjct: 187 LRELPFRVDRLKTGTPPRIDARSVDFSVMQEQPGDTPTPVMSYMGKLTDHPQQISCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH I+ + S +Y+G I+ GPRYCPSIEDKI+RF +++ HQ+F+EPEGL T Sbjct: 247 TNERTHEILRSGLDRSPMYTGVIEGVGPRYCPSIEDKIMRFADKDQHQVFVEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP +IQ +++I G E +I+RPGYAIEYD+ NP++L TLETK ++GLF Sbjct: 307 LYPNGISTSLPFDIQLAAVQSIRGFENAHIVRPGYAIEYDFFNPQDLKHTLETKYMNGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A +S + R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGANAALRSLEKAQWYPRRDEAYIGVLVDDLITLGTSEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG +GE R + F + + LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVGEERWQAFCNKREAIEQEQQRLKSTWIL 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 K + ++ K + + L P+ +L + + V E+++I++ Sbjct: 487 PKTPEADELAPKLKTPLTREYNLADLLKRPELVYSDLAHLKGEGVS-DEQVAEQVEIQNK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y RQ E ++++ +E +P+DFDY + LSNELK KL ++P + QAS+I+G+ Sbjct: 546 YEGYISRQKDEIEQMRRQENTPLPEDFDYEKVGGLSNELKAKLQEVRPATIAQASRIQGI 605 Query: 602 TPAALNLLLIYIKKNTVKLNE 622 TPAA++LLL+Y+KK + + Sbjct: 606 TPAAISLLLVYLKKQQLTKKQ 626 >gi|330890256|gb|EGH22917.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. mori str. 301020] Length = 630 Score = 809 bits (2090), Expect = 0.0, Method: Composition-based stats. Identities = 285/617 (46%), Positives = 385/617 (62%), Gaps = 5/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIRETLENQPNLWIFQQACD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L + Sbjct: 127 DLIVEQDQVRGVVTQMGMRIFADSVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAHR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ K + + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGSKEQHPPQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 247 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +++I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVQSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCTKRESIELEEQRLKSTWVR 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +I+ L+ P+ +L ++ V E+++I++ Sbjct: 487 PGTAQGDAIAEHFGTPLTHEYNLLNLLTRPEIDYASLIALTGQGCT-DPQVAEQVEIKTK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E ++ E +P+D DY+++ LS E++ KL I +P L QAS+I G+ Sbjct: 546 YAGYIDRQQDEIARLRASEDTRLPEDIDYAAISGLSKEIQSKLGITRPETLGQASRIPGV 605 Query: 602 TPAALNLLLIYIKKNTV 618 TPAA++LL+I++KK Sbjct: 606 TPAAISLLMIHLKKRGA 622 >gi|331017733|gb|EGH97789.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 630 Score = 809 bits (2089), Expect = 0.0, Method: Composition-based stats. Identities = 289/617 (46%), Positives = 384/617 (62%), Gaps = 5/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIREILENQPNLWIFQQACD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 127 DLIVEQDQVRGVVTQMGLRILADSVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ K + Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGSKEQHPAQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 247 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R+I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVRSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCTKRESIELEEQRLKSTWVR 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +IS L+ P+ +L ++ LV E+++I+ Sbjct: 487 PGTQQGDAISAHFGTPLTHEYNLLNLLTRPEIDYNSLIALTGQGCA-DPLVAEQVEIKIK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E ++ E +P+D DY+ + LS E++ KL I +P L QAS+I G+ Sbjct: 546 YAGYIDRQQEEIARLRASEDTRLPEDIDYTGISGLSKEIQSKLGITRPETLGQASRIPGV 605 Query: 602 TPAALNLLLIYIKKNTV 618 TPAA++LL+I++KK Sbjct: 606 TPAAISLLMIHLKKRGA 622 >gi|77920731|ref|YP_358546.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pelobacter carbinolicus DSM 2380] gi|123573042|sp|Q39ZT1|MNMG_PELCD RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|77546814|gb|ABA90376.1| glucose inhibited division protein GidA [Pelobacter carbinolicus DSM 2380] Length = 619 Score = 809 bits (2089), Expect = 0.0, Method: Composition-based stats. Identities = 302/616 (49%), Positives = 398/616 (64%), Gaps = 1/616 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + Y+VIV+G GHAGCEAA +A++G +T L+ + MSCNPAIGGL KGHLVRE Sbjct: 4 YGKDYEVIVVGAGHAGCEAALASARMGCNTLLLNLHLDAVAQMSCNPAIGGLAKGHLVRE 63 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M RV DA GIQFR LN KKGPAVR R QADR Y+ M++ + +Q LD+ Q Sbjct: 64 IDALGGEMARVIDATGIQFRTLNTKKGPAVRATRAQADRRAYQFHMKQVVENQPALDLKQ 123 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G V+ + + +S + D TVVLTTGTF+RG+IH+G P GR G+ PS Sbjct: 124 GSVSRLILQGDKVSGVETTDGLRFFGQTVVLTTGTFMRGLIHVGLQHFPGGRAGEPPSLG 183 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L + + GRLKTGTPARLDG TI +D+ Q D PFS T+KIT+ Q+ C Sbjct: 184 LSDHLAELGLRVGRLKTGTPARLDGNTIDYDRLVPQHGDVPPKPFSADTEKITSPQVPCF 243 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT TN TH II + + S +Y G I+ GPRYCPSIEDKI+RF +++ H +FLEPEGL Sbjct: 244 ITATNAHTHDIIRQGLDRSPLYQGVIEGVGPRYCPSIEDKIMRFPDKDSHHVFLEPEGLG 303 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T VYPNG+ST+LP ++Q F+RTIPGLE V I+RPGYAIEYD+++P +L P+LETKKI Sbjct: 304 TREVYPNGVSTSLPPDVQLAFLRTIPGLEHVEIMRPGYAIEYDFVDPIQLKPSLETKKIR 363 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 LFLAGQINGT+GYEEAAAQGL+AGIN+ + R +YIGVMIDDL + G Sbjct: 364 NLFLAGQINGTSGYEEAAAQGLMAGINAVHALRDCPPVVLGRDQAYIGVMIDDLVTCGTS 423 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+ LR DNAD RLTP+G ++G + + R +RF + + + R L+ Sbjct: 424 EPYRMFTSRAEYRLLLREDNADQRLTPLGHQVGLVSDERWQRFTRKMDKIVEGRDFLEKR 483 Query: 482 VLTSKNLSSTS-ISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 L+S + + + + + + L PD +I++L V E+LQIE Sbjct: 484 RLSSSDKEAIGRLGLEDLKNGLSLVQILRRPDINIEDLVFCDDRLADIPENVREQLQIEI 543 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ + + E+ IP D DYS + LS E++EKL ++P NL QA++I G Sbjct: 544 KYEGYIARQYEMVERFRRSEQIAIPSDMDYSPIEGLSIEVREKLQKVRPQNLGQAARIPG 603 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA+ +L + +++N Sbjct: 604 VTPAAVAILSVLLRRN 619 >gi|182416733|ref|ZP_02948132.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium butyricum 5521] gi|237669669|ref|ZP_04529647.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium butyricum E4 str. BoNT E BL5262] gi|182379390|gb|EDT76885.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium butyricum 5521] gi|237654903|gb|EEP52465.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium butyricum E4 str. BoNT E BL5262] Length = 628 Score = 809 bits (2089), Expect = 0.0, Method: Composition-based stats. Identities = 280/620 (45%), Positives = 396/620 (63%), Gaps = 3/620 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVIV+G GHAGCEAA +A++G +T + T +I M CNP IGG KGHLVREIDA Sbjct: 9 QFDVIVVGAGHAGCEAALASARMGLNTLVCTINLDSIALMPCNPNIGGTAKGHLVREIDA 68 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG D IQ R+LN KGPAV R QAD++ Y+ M++ + Q+NL + Q EV Sbjct: 69 LGGEMGVNIDHTFIQSRMLNTSKGPAVHSLRAQADKKDYQFRMKKVLEEQDNLKIRQIEV 128 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E +S +V ++ ++ +C VVL TGT+L+G I IG++ G G P+N L Sbjct: 129 TELIVEDGKVSGVVTKNGAVFKCKAVVLATGTYLKGKIIIGEVSYSGGPNGLFPANDLSQ 188 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S + R KTGTPAR++ K++ + K +Q D++++PFSFM+ K+ Q+ C +T Sbjct: 189 SLLDLGISLRRFKTGTPARINSKSVDFSKMIEQNGDDKIVPFSFMSGKLQKEQVACYLTY 248 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN ETH II ENI S IY+G IK GPRYCPSIEDK++RF ++ HQIF+EPEG++T Sbjct: 249 TNEETHNIIRENINRSPIYNGSIKGVGPRYCPSIEDKVMRFPDKTQHQIFVEPEGMDTLE 308 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G S++LPEE+Q + +RT+PGLE V ++R YAIEYD I+P +L PTLE K I GL+ Sbjct: 309 MYVGGFSSSLPEEVQIKMLRTLPGLENVEMMRTAYAIEYDSIDPTQLKPTLEFKNIDGLY 368 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ+NG++GYEEA AQGLVAG+N+A K + + +R+D+YIGV+IDDL +KG EPY Sbjct: 369 GAGQLNGSSGYEEAGAQGLVAGVNAALKIKNQEPLILTRSDAYIGVLIDDLVTKGTNEPY 428 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSRAEYR+ LR DNAD RLT +G ++G + E R F + LK+L +T Sbjct: 429 RMMTSRAEYRLLLRQDNADLRLTEMGHRVGLVTEERYNTFLTRKKNIEDELERLKTLKVT 488 Query: 485 SKNLSST---SISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +K + SI+ K + YE + P+ L + P+ S + E++ + + Sbjct: 489 NKKEVNEFLVSINSTPLRKAISFYELMQRPELEYFQLAQLDPERPDLSDDIGEQINVLTK 548 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y QM + + K EK+L+PKD DY+ + L E +KLS +KP ++ QAS+I G+ Sbjct: 549 YEGYIQSQMEQVSQFKKFEKKLLPKDIDYNDVSGLRTEAVQKLSNIKPISIGQASRISGV 608 Query: 602 TPAALNLLLIYIKKNTVKLN 621 +PA +++LLIY++ K + Sbjct: 609 SPADISVLLIYLEHQYGKQS 628 >gi|221202191|ref|ZP_03575226.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia multivorans CGD2M] gi|221208748|ref|ZP_03581747.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia multivorans CGD2] gi|221171380|gb|EEE03828.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia multivorans CGD2] gi|221177985|gb|EEE10397.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia multivorans CGD2M] Length = 656 Score = 809 bits (2089), Expect = 0.0, Method: Composition-based stats. Identities = 288/629 (45%), Positives = 386/629 (61%), Gaps = 15/629 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DA Sbjct: 6 EFDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D AGIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q V Sbjct: 66 LGGAMAAATDEAGIQFRILNSSKGPAVRATRAQADRILYKAAIRRRLENQPNLWLFQQAV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + V Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 126 DDLMVEGDRVVGAVTQIGIRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSA 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITNRQ-IECGI 242 + GRLKTGTP R+DG+TI + K E+Q D IP FSF+ + Q + C + Sbjct: 186 RLKELKLPQGRLKTGTPPRIDGRTIDFSKLEEQPGDLDPIPVFSFLGRAEQHPQQLPCWV 245 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPEGL T Sbjct: 246 THTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPEGLTT 305 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + YPNGIST+LP ++Q + + ++ GLE+ +I+RPGYAIEYDY +P+ L +LETK I+G Sbjct: 306 NEFYPNGISTSLPFDVQLELVHSMRGLEQAHILRPGYAIEYDYFDPRALKASLETKAING 365 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AG+N+ R + D C R +Y+GV++DDL ++GV E Sbjct: 366 LFFAGQINGTTGYEEAAAQGLLAGVNAGRYVQEKDAWCPRRDQAYLGVLVDDLVTRGVAE 425 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F + + LK+ Sbjct: 426 PYRMFTSRAEYRLSLREDNADMRLTEIGRELGLVDDVRWDAFCRKRDAVSRETERLKTTW 485 Query: 483 LTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNL----------FSICPDARKFS 529 +T K L ++++ K + E L P + D Sbjct: 486 VTPKTLPPEEASALLGKPIDHEYSLAELLRRPGVDYDGVCGLKGGECGPAEPLADDPVLL 545 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 + + E+++I Y Y RQ E + E +P DY + LS E+ +KL+ +P Sbjct: 546 AQIKEQVEIGIKYQGYIERQATEIERNDANENTRLPDGIDYREVRGLSFEVSQKLNQFRP 605 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKKNTV 618 + QAS+I G+TPAA++LL++++K+ + Sbjct: 606 ETIGQASRISGVTPAAISLLMVHLKRRGL 634 >gi|138897066|ref|YP_001127519.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Geobacillus thermodenitrificans NG80-2] gi|196249887|ref|ZP_03148583.1| glucose inhibited division protein A [Geobacillus sp. G11MC16] gi|166222936|sp|A4ITX0|MNMG_GEOTN RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|134268579|gb|ABO68774.1| Glucose inhibited division protein A [Geobacillus thermodenitrificans NG80-2] gi|196210763|gb|EDY05526.1| glucose inhibited division protein A [Geobacillus sp. G11MC16] Length = 629 Score = 809 bits (2089), Expect = 0.0, Method: Composition-based stats. Identities = 280/619 (45%), Positives = 394/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAGCEAA +A++GA T +IT I M CNP+IGG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGCEAALASARIGAKTLVITLNLDMIAFMPCNPSIGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ R+LN KGPAVR R QAD+ LY+ M++ + +Q+NL ++QG+V Sbjct: 67 LGGEMGKNIDKTYIQIRMLNTGKGPAVRALRAQADKVLYQREMKKTLENQKNLTLLQGKV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ Q + VV+TTGTFLRG I IG +K +G PS L Sbjct: 127 ERLIVEDGVCKGVITQTGAHYYAKAVVITTGTFLRGEIIIGDIKYSSGPNNQQPSIKLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F+ R KTGTP R++ +TI + KTE Q DE FS+ T K Q+ C +T Sbjct: 187 HLEELGFELVRFKTGTPPRVNSRTIDYSKTEIQPGDEEPRAFSYETTKYITDQLPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETHRII EN+ S +YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG T+ Sbjct: 247 TTEETHRIIDENLHLSPMYSGMIKGTGPRYCPSIEDKVVRFHDKPRHQIFLEPEGRETEE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE IQ + + TIPGLEK ++R GYAIEYD I P +L+PTLETK + L+ Sbjct: 307 VYVQGLSTSLPEHIQRKLLETIPGLEKAQLMRAGYAIEYDAIVPTQLWPTLETKLVKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QG++AGIN+A ++ + I SR+D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGIMAGINAAHRALGREEIILSRSDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G ++G I E R + F + + L+++++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTELGYRIGLISEERYQAFLAKKEAIEREKKRLQTVIIK 486 Query: 485 S-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + S +DG A + L P+ + +++ + P + V E+++I+ Sbjct: 487 PTPEVQEVIRQAGGSELKDGIR--AADLLRRPEMTYEHIQKLAPADEDIAPEVAEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + E + +K E + IP+D DY ++ L+ E ++KL ++P ++ QAS+I Sbjct: 545 IKYEGYIQKSLQEVERLKKMENKKIPEDIDYDAIQGLATEARQKLKQVRPLSIAQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+Y+++ + Sbjct: 605 GVNPADISILLVYLEQGRI 623 >gi|161523273|ref|YP_001578285.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia multivorans ATCC 17616] gi|189351954|ref|YP_001947582.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia multivorans ATCC 17616] gi|238687049|sp|A9AJF1|MNMG_BURM1 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|160340702|gb|ABX13788.1| glucose inhibited division protein A [Burkholderia multivorans ATCC 17616] gi|189335976|dbj|BAG45046.1| glucose inhibited division protein A [Burkholderia multivorans ATCC 17616] Length = 656 Score = 809 bits (2089), Expect = 0.0, Method: Composition-based stats. Identities = 289/629 (45%), Positives = 386/629 (61%), Gaps = 15/629 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DA Sbjct: 6 EFDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D AGIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q V Sbjct: 66 LGGAMAAATDEAGIQFRILNSSKGPAVRATRAQADRILYKAAIRRRLENQPNLWLFQQAV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + V Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 126 DDLMVEGDCVVGAVTQIGIRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSA 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITNRQ-IECGI 242 + GRLKTGTP R+DG+TI + K E+Q D IP FSF+ + Q + C + Sbjct: 186 RLKELKLPQGRLKTGTPPRIDGRTIDFSKLEEQPGDLDPIPVFSFLGRAEQHPQQLPCWV 245 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPEGL T Sbjct: 246 THTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPEGLTT 305 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + YPNGIST+LP ++Q + + ++ GLE+ +I+RPGYAIEYDY +P+ L +LETK I+G Sbjct: 306 NEFYPNGISTSLPFDVQLELVHSMRGLEQAHILRPGYAIEYDYFDPRALKASLETKAING 365 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AG+N+ R + D C R +Y+GV++DDL ++GV E Sbjct: 366 LFFAGQINGTTGYEEAAAQGLLAGVNAGRYVQEKDAWCPRRDQAYLGVLVDDLVTRGVAE 425 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F + + LK+ Sbjct: 426 PYRMFTSRAEYRLSLREDNADMRLTEIGRELGLVDDVRWDAFCRKRDAVSRETERLKTTW 485 Query: 483 LTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNL----------FSICPDARKFS 529 +T K L +T++ K + E L P + D Sbjct: 486 VTPKTLPPEEATALLGKPIDHEYSLAELLRRPGVDYDGVCGLKGGECGPAEPLADDPVLL 545 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 + + E+++I Y Y RQ E + E +P DY + LS E+ +KL+ +P Sbjct: 546 AQIKEQVEIGIKYQGYIERQATEIERNDANENTRLPDGIDYREVRGLSFEVSQKLNQFRP 605 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKKNTV 618 + QAS+I G+TPAA++LL++++K+ + Sbjct: 606 ETIGQASRISGVTPAAISLLMVHLKRRGL 634 >gi|104784445|ref|YP_610943.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas entomophila L48] gi|122401169|sp|Q1I2H6|MNMG_PSEE4 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|95113432|emb|CAK18160.1| glucose-inhibited division protein A [Pseudomonas entomophila L48] Length = 630 Score = 808 bits (2088), Expect = 0.0, Method: Composition-based stats. Identities = 283/621 (45%), Positives = 382/621 (61%), Gaps = 5/621 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+E Sbjct: 3 FPSRFEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGHMSCNPAIGGIGKSHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M D +GIQFRVLN +KGPAVR R QADR +Y+ ++ + +Q NL + Q Sbjct: 63 IDALGGAMALATDMSGIQFRVLNNRKGPAVRATRAQADRAIYKAVVREILENQPNLWIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 E++ + +V Q +VVLT+GTFL G+IHIG GR GD P+N+ Sbjct: 123 QSCDDLIVEQDQVKGVVTQMGLRFFADSVVLTSGTFLGGLIHIGLQNYSGGRAGDPPANA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK-ITNRQIEC 240 L + GRLKTGTP R+DG+++ + +Q D + SFM + + RQ+ C Sbjct: 183 LAQRMRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFMGNAAMHPRQVSC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL Sbjct: 243 WITHTNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T +YPNGIST+LP ++Q + +R+I G+E +I+RPGYAIEYDY +P++L +LETK I Sbjct: 303 TTHELYPNGISTSLPFDVQLEIVRSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQINGTTGYEEA AQGL+AG N+A ++ + C R ++YIGV++DDL + G Sbjct: 363 GGLFFAGQINGTTGYEEAGAQGLLAGTNAALRAQGRESWCPRRDEAYIGVLVDDLITLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT G +LG I + R F + LKS Sbjct: 423 QEPYRMFTSRAEYRLILREDNADLRLTEKGRELGLIDDARWAAFCAKREGIEREEQRLKS 482 Query: 481 LVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 + ++ K + L+ P+ L V E+++ Sbjct: 483 TWVRPGTPQGQAVVDKFGTPLAHEYSLLNLLARPEVDYAGLIEATGG-EVIDPQVAEQVE 541 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I++ YA Y RQ E ++ E +P D DY+++ LS E++ KL +P L QAS+ Sbjct: 542 IKTKYAGYIDRQQEEIARLRASEDTRLPVDIDYTTISGLSKEIQGKLEQTRPETLGQASR 601 Query: 598 IEGMTPAALNLLLIYIKKNTV 618 I G+TPAA++LLLI++KK Sbjct: 602 IPGVTPAAISLLLIHLKKRGA 622 >gi|330937306|gb|EGH41314.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. pisi str. 1704B] Length = 630 Score = 808 bits (2088), Expect = 0.0, Method: Composition-based stats. Identities = 287/617 (46%), Positives = 385/617 (62%), Gaps = 5/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIRETLENQPNLWIFQQACD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 127 DLIVEQDQVRGVVTQMGMRIFAESVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ +K + + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGNKEQHPPQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 247 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +++I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVQSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDIWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCTKRESIELEEQRLKSTWVR 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +I+ L+ P+ +L SI V E+++I++ Sbjct: 487 PGTEQGDAIAAHFGTPLTHEYNLLNLLTRPEIDYASLISITGQGC-IDPQVAEQVEIKTK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E ++ E +P+D DY+++ LS E++ KL I +P L QAS+I G+ Sbjct: 546 YAGYIDRQQDEIARLRASEDTGLPEDIDYAAISGLSKEIQSKLGITRPQTLGQASRIPGV 605 Query: 602 TPAALNLLLIYIKKNTV 618 TPAA++LL+I++KK Sbjct: 606 TPAAISLLMIHLKKRGA 622 >gi|302063884|ref|ZP_07255425.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. tomato K40] Length = 631 Score = 808 bits (2088), Expect = 0.0, Method: Composition-based stats. Identities = 289/617 (46%), Positives = 385/617 (62%), Gaps = 5/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 8 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 68 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIREILENQPNLWIFQQACD 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 128 DLIVEQDQVRGVVTQMGLRILADSVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAQR 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ K + Q+ C IT Sbjct: 188 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGSKEQHPAQVSCWITH 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 248 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R+I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 308 LYPNGISTSLPFDVQLQIVRSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 368 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 428 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCTKRESIELEEQRLKSTWVR 487 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +IS L+ P+ +L ++ LV E+++I++ Sbjct: 488 PGTQQGDAISAHFGTPLTHEYNLLNLLTRPEIDYNSLIALTGQGCA-DPLVAEQVEIKTK 546 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E ++ E +P+D DY+ + LS E++ KL I +P L QAS+I G+ Sbjct: 547 YAGYIDRQQEEIARLRASEDTRLPEDIDYTGISGLSKEIQSKLGITRPETLGQASRIPGV 606 Query: 602 TPAALNLLLIYIKKNTV 618 TPAA++LL+I++KK Sbjct: 607 TPAAISLLMIHLKKRGA 623 >gi|157964062|ref|YP_001504096.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shewanella pealeana ATCC 700345] gi|189039358|sp|A8HAH4|MNMG_SHEPA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|157849062|gb|ABV89561.1| glucose inhibited division protein A [Shewanella pealeana ATCC 700345] Length = 629 Score = 808 bits (2088), Expect = 0.0, Method: Composition-based stats. Identities = 285/622 (45%), Positives = 380/622 (61%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +DVIV+GGGHAG EAA +A++G+ T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 FHERFDVIVVGGGHAGTEAALASARMGSKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M D AGIQFR LN KGPAVR R QADR LYR +Q + Q NL + Q Sbjct: 63 IDALGGAMAVATDFAGIQFRTLNSSKGPAVRATRAQADRALYRHKIQEILQHQANLRIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E + +V Q VVLT GTFL G IHIG GR GD P+ + Sbjct: 123 QAVDDLVVENGKVVGVVTQMGLAFEAPAVVLTAGTFLGGKIHIGLENYSGGRAGDPPAIA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIEC 240 L + + GRLKTGTP R+D TI + + +Q D+ L SF+ D Q+ C Sbjct: 183 LAHRLRELPIRVGRLKTGTPPRIDANTIDFSQMTEQKGDDPLPVMSFIGDVNDHPEQVSC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN TH II + S +YSG I+ GPRYCPSIEDK+ RF ++ HQIF+EPEGL Sbjct: 243 HITHTNERTHDIIRGGLDRSPMYSGIIEGIGPRYCPSIEDKVNRFADKTSHQIFIEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 NT +YPNGIST+LP ++Q +R+I G+E I+RPGYAIEYDY +P++L +LETK I Sbjct: 303 NTTEIYPNGISTSLPFDVQLNLVRSIKGMENAEIMRPGYAIEYDYFDPRDLKNSLETKTI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 +GLF AGQINGTTGYEEA AQGL+AG+N++ + + C R +Y+GV++DDL++ G Sbjct: 363 AGLFFAGQINGTTGYEEAGAQGLLAGMNASLQVQGKEAWCPRRDQAYLGVLVDDLSTLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT G +LG + + R F++ ++ L+ Sbjct: 423 KEPYRMFTSRAEYRLLLREDNADLRLTEKGRELGLVDDNRWALFSEKMESIETELQRLRG 482 Query: 481 LVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 + + +++ + T + L P+ L SI E++ Sbjct: 483 QWVHPNSPLVEALNPHLNTPITREATFEDLLRRPEMDYPKLMSIDGFGPSLEDQRAAEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 QI+ Y+ Y RQ E + E L+P D DY +P LSNE+ K++ KP + QAS Sbjct: 543 QIQVKYSGYIQRQQGEIDKAIRHETTLLPLDLDYQEVPGLSNEVIAKMNEHKPETIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I GMTPAA+++LL+++KK + Sbjct: 603 RISGMTPAAISILLVHLKKRGL 624 >gi|56422028|ref|YP_149346.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Geobacillus kaustophilus HTA426] gi|297531686|ref|YP_003672961.1| glucose inhibited division protein A [Geobacillus sp. C56-T3] gi|81170543|sp|Q5KU58|MNMG_GEOKA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|56381870|dbj|BAD77778.1| glucose-inhibited division protein [Geobacillus kaustophilus HTA426] gi|297254938|gb|ADI28384.1| glucose inhibited division protein A [Geobacillus sp. C56-T3] Length = 629 Score = 808 bits (2088), Expect = 0.0, Method: Composition-based stats. Identities = 276/619 (44%), Positives = 394/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAGCEAA +A++GA T +IT I M CNP+IGG KG +VREIDA Sbjct: 7 TYDVIVVGAGHAGCEAALASARIGAKTLVITLNLDMIAFMPCNPSIGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M + D IQ R+LN KGPAVR R QAD+ LY+ M++ + +QENL ++QG+V Sbjct: 67 LGGEMAKNIDKTYIQMRMLNTGKGPAVRALRAQADKVLYQREMKKTLENQENLTLLQGKV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ + VV+TTGTFLRG I IG +K +G PS L Sbjct: 127 ERLIVEDGVCKGVITHTGAHYYAKAVVITTGTFLRGEIIIGDIKYSSGPNNQQPSIKLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F+ R KTGTP R++ +TI + KTE Q D+ FS+ T K Q+ C +T Sbjct: 187 HLEELGFELVRFKTGTPPRVNSRTIDYSKTEIQPGDKEPRAFSYETTKYITDQLPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETHRII EN+ S +YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG T+ Sbjct: 247 TTEETHRIIDENLHLSPMYSGMIKGTGPRYCPSIEDKVVRFHDKPRHQIFLEPEGRETEE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE IQ + + TIPGLEK ++R GYAIEYD I P +L+PTLETK + L+ Sbjct: 307 VYVQGLSTSLPEHIQRKLLETIPGLEKAQLMRAGYAIEYDAIVPTQLWPTLETKLVKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QG++AGIN+A ++ + I SR+D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGIMAGINAAHRALGREEIILSRSDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G ++G I E R ++F + + L+++++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTELGYRIGLISEERYQKFLAKKEAIEREKKRLQTVIIK 486 Query: 485 S-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + S +DG A + L P+ + +++ + P + + V E+++I+ Sbjct: 487 PTPKVQEVIREAGGSELKDGIR--AADLLRRPEMTYEHIRKLAPADEEIAPEVAEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + E + +K E + IP+D DY ++ L+ E ++KL ++P ++ QAS+I Sbjct: 545 IKYEGYIQKSLQEVERLKKMENKKIPEDIDYDAIQGLATEARQKLKQVRPLSIAQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+Y+++ + Sbjct: 605 GVNPADISILLVYLEQGRI 623 >gi|213968448|ref|ZP_03396591.1| glucose-inhibited division protein A [Pseudomonas syringae pv. tomato T1] gi|301384265|ref|ZP_07232683.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. tomato Max13] gi|302131968|ref|ZP_07257958.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213926736|gb|EEB60288.1| glucose-inhibited division protein A [Pseudomonas syringae pv. tomato T1] Length = 630 Score = 808 bits (2088), Expect = 0.0, Method: Composition-based stats. Identities = 289/617 (46%), Positives = 385/617 (62%), Gaps = 5/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIREILENQPNLWIFQQACD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 127 DLIVEQDQVRGVVTQMGLRILADSVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ K + Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGSKEQHPAQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 247 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R+I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVRSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCTKRESIELEEQRLKSTWVR 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +IS L+ P+ +L ++ LV E+++I++ Sbjct: 487 PGTQQGDAISAHFGTPLTHEYNLLNLLTRPEIDYNSLIALTGQGCA-DPLVAEQVEIKTK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E ++ E +P+D DY+ + LS E++ KL I +P L QAS+I G+ Sbjct: 546 YAGYIDRQQEEIARLRASEDTRLPEDIDYTGISGLSKEIQSKLGITRPETLGQASRIPGV 605 Query: 602 TPAALNLLLIYIKKNTV 618 TPAA++LL+I++KK Sbjct: 606 TPAAISLLMIHLKKRGA 622 >gi|237801670|ref|ZP_04590131.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. oryzae str. 1_6] gi|331024529|gb|EGI04585.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. oryzae str. 1_6] Length = 630 Score = 808 bits (2088), Expect = 0.0, Method: Composition-based stats. Identities = 287/617 (46%), Positives = 385/617 (62%), Gaps = 5/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAIATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIRETLENQPNLWIFQQACD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L + Sbjct: 127 DLIVEQDQVRGVVTQMGMRIFADSVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAHR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ K + Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGSKEQHPKQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 247 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +++I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVQSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGANAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCTKRESIEQEEQRLKSTWVR 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +I+ L+ P+ +L +I V E+++I++ Sbjct: 487 PGTEQGDAIAAHFGTPLTHEYNLLNLLTRPEIDYASLINITGQGC-IDPQVAEQVEIKTK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E ++ E +P+D DY+ + LS E++ KL I +P L QAS+I G+ Sbjct: 546 YAGYIDRQQDEIARLRASEDTRLPEDIDYAGISGLSKEIQSKLGITRPETLGQASRIPGV 605 Query: 602 TPAALNLLLIYIKKNTV 618 TPAA++LL+I++KK Sbjct: 606 TPAAISLLMIHLKKRGA 622 >gi|85060383|ref|YP_456085.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Sodalis glossinidius str. 'morsitans'] gi|123518619|sp|Q2NQ95|MNMG_SODGM RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|84780903|dbj|BAE75680.1| glucose inhibited division protein A [Sodalis glossinidius str. 'morsitans'] Length = 629 Score = 808 bits (2088), Expect = 0.0, Method: Composition-based stats. Identities = 285/620 (45%), Positives = 387/620 (62%), Gaps = 5/620 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVI+IGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA Sbjct: 6 HFDVIIIGGGHAGTEAAMASARMGCQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 + GLM + D GIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 66 MGGLMAQAIDKGGIQFRILNASKGPAVRATRAQADRVLYRQAVRGALENQPNLMIFQQAV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + V Q R VVLT GTFL G IHIG GR GD PS SL Sbjct: 126 EDLIMEGDRVVGAVTQIGLKFRARAVVLTVGTFLDGKIHIGMDHYSGGRAGDPPSVSLSR 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 + F RLKTGTP R+D +I + + Q D+ L FSF+ + RQI C IT Sbjct: 186 RLRELPFRVNRLKTGTPPRIDAHSIDFSRLATQHGDDPLPVFSFLGSADQHPRQIPCYIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I +N+ S +Y+G I+ GPRYCPSIEDK++RF +R+ HQIFLEPEGL ++ Sbjct: 246 YTNDKTHEVIRQNLDRSPMYAGIIEGVGPRYCPSIEDKVMRFADRDAHQIFLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q + + ++ GLE I+RPGYAIEYD+ +P++L TLE+K I GL Sbjct: 306 EIYPNGISTSLPFDVQMKIVHSMQGLENARIVRPGYAIEYDFFDPRDLKLTLESKLIEGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQG++AG+N+AR + D R +Y+GV++DDL + G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGMLAGLNAARLAMGKDGWSPRRDQAYLGVLVDDLCTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT G +LG + + R +RF ++ R L+ + + Sbjct: 426 YRMFTSRAEYRLLLREDNADLRLTETGRQLGMVDDVRWERFCAKQEQIERERQRLRDIWV 485 Query: 484 TSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIE 539 + ++ + E L P+ L + S E+++I+ Sbjct: 486 HPGSDGVEQLNPLLKASLTREANGEELLRRPEMDYARLTHLERFGPALVDSQAAEQVEIQ 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ E E L+P D+S++ LSNE+ KL+ KP ++ QAS+I Sbjct: 546 IKYQGYIARQQEEIARQMRNEHTLLPAAMDFSTVSGLSNEVIAKLNDHKPNSIGQASRIS 605 Query: 600 GMTPAALNLLLIYIKKNTVK 619 G+TPAA+++LL+++KK ++ Sbjct: 606 GVTPAAISILLVWLKKQGLR 625 >gi|330961498|gb|EGH61758.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. maculicola str. ES4326] Length = 630 Score = 808 bits (2088), Expect = 0.0, Method: Composition-based stats. Identities = 288/617 (46%), Positives = 385/617 (62%), Gaps = 5/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIRETLENQPNLWIFQQACD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 127 DLIVEQDQVRGVVTQLGMRILADSVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ K + + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGSKEQHPPQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 247 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R+I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVRSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCTKRESIALEEQRLKSTWVR 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +I+ L+ P+ +L +I + LV E+++I++ Sbjct: 487 PGTEQGDAIASHFGTPLTHEYNLLNLLTRPEIDYASLIAITGEGCT-DPLVAEQVEIKTK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E ++ E +P+D DY+ + LS E++ KL I +P L QAS+I G+ Sbjct: 546 YAGYIDRQQDEIARLRASEDTRLPEDIDYAGISGLSKEIQSKLGITRPETLGQASRIPGV 605 Query: 602 TPAALNLLLIYIKKNTV 618 TPAA++LL+I++KK Sbjct: 606 TPAAISLLMIHLKKRGA 622 >gi|167626210|ref|YP_001676504.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shewanella halifaxensis HAW-EB4] gi|189039357|sp|B0TQG5|MNMG_SHEHH RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|167356232|gb|ABZ78845.1| glucose inhibited division protein A [Shewanella halifaxensis HAW-EB4] Length = 629 Score = 808 bits (2087), Expect = 0.0, Method: Composition-based stats. Identities = 288/622 (46%), Positives = 379/622 (60%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +DVIV+GGGHAG EAA +A++G+ T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 FHERFDVIVVGGGHAGTEAALASARMGSKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M D AGIQFR LN KGPAVR R QADR LYR +Q + Q NL + Q Sbjct: 63 IDALGGAMAVATDFAGIQFRTLNSSKGPAVRATRAQADRALYRHKIQEILQHQTNLRIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E N + +V Q VVLT GTFL G IHIG GR GD PS + Sbjct: 123 QAVDDLVVENNKVIGVVTQMGLAFEAPAVVLTAGTFLGGKIHIGLENYSGGRAGDPPSIA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIEC 240 L + + GRLKTGTP R+D TI + +Q D L SF+ D Q+ C Sbjct: 183 LAHRLRELPIRVGRLKTGTPPRIDANTIDFSLMTEQKGDNPLPVMSFIGDVNDHPEQVSC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN TH II + S +YSG I+ GPRYCPSIEDKI RF ++ HQIF+EPEGL Sbjct: 243 YITHTNERTHDIIRGGLDRSPMYSGIIEGIGPRYCPSIEDKINRFADKTSHQIFIEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 NT +YPNGIST+LP ++Q +R+I G+E I+RPGYAIEYDY +P++L +LETK I Sbjct: 303 NTTEIYPNGISTSLPFDVQLNLVRSIKGMENAEIMRPGYAIEYDYFDPRDLKNSLETKAI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 SGLF AGQINGTTGYEEA AQGL+AG+N++ + + R +Y+GV++DDL++ G Sbjct: 363 SGLFFAGQINGTTGYEEAGAQGLLAGMNASLQVQGKEAWAPRRDQAYLGVLVDDLSTLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT G +LG + ++R F++ ++ L+ Sbjct: 423 KEPYRMFTSRAEYRLLLREDNADLRLTEKGRELGLVDDKRWALFSEKMESIETELQRLRG 482 Query: 481 LVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 + + +++ + T + L P+ L SI E++ Sbjct: 483 QWIHPNSPLVEALNPNLNTPITREATFEDLLRRPEMDYPKLMSIDGFGPGLEDQRAAEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 QI+ Y+ Y RQ E + E L+P D DY +P LSNE+ K++ KP + QAS Sbjct: 543 QIQVKYSGYIQRQQGEIDKAIRHETTLLPLDLDYQEVPGLSNEVIAKMNEHKPETIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I GMTPAA+++LL+++KK + Sbjct: 603 RISGMTPAAISILLVHLKKRGL 624 >gi|90409269|ref|ZP_01217371.1| glucose-inhibited division protein A [Psychromonas sp. CNPT3] gi|90309629|gb|EAS37812.1| glucose-inhibited division protein A [Psychromonas sp. CNPT3] Length = 628 Score = 808 bits (2087), Expect = 0.0, Method: Composition-based stats. Identities = 296/625 (47%), Positives = 400/625 (64%), Gaps = 5/625 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +DVI+IGGGHAG EAAA +A++G +T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 YHEHFDVIIIGGGHAGTEAAASSARMGLNTLLLTHNIETLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DAL GLM D AGIQFR LN KGPAVR R QADR LY+ A++ ++ +QENL + Q Sbjct: 63 VDALGGLMANATDKAGIQFRTLNSSKGPAVRATRAQADRLLYKAAIREKLENQENLKIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 EV E + ++ +V + +VVLT GTFL G+IHIG GR GD S Sbjct: 123 QEVEDLIVENDQVTGVVTKMGVKFSAKSVVLTVGTFLNGLIHIGLKNYSGGRAGDPASIG 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIEC 240 L GRLKTGTPAR+D ++I + E Q D + FSFM + RQI C Sbjct: 183 LAQRLKDLPIRMGRLKTGTPARIDARSIDFSVLEVQHGDTPIPTFSFMGKASDHPRQIPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH II ++ S +Y+G I GPRYCPSIEDKI+RF ++N HQIF+EPEGL Sbjct: 243 YITHTNEKTHDIIRNSLDRSPMYTGVIDGVGPRYCPSIEDKIMRFADKNSHQIFVEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T VYPNGIST+LP ++Q +FI+++ G E + RPGYAIEYDY +P++L TLE+K I Sbjct: 303 TTHEVYPNGISTSLPFDVQIEFIQSMKGFENAFLTRPGYAIEYDYCDPRDLKSTLESKYI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQINGTTGYEEAAAQGL+AG+N+A S + R ++Y+GV+IDDL++ G Sbjct: 363 HGLFFAGQINGTTGYEEAAAQGLLAGMNAALYSQDKEGWSPRRNEAYLGVLIDDLSTLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD+RLT IG + G I + R K F++ + LK Sbjct: 423 KEPYRMFTSRAEYRLLLREDNADSRLTAIGREYGVIDDARWKMFSEKQETIELESQRLKG 482 Query: 481 LVLTSKNLSSTSISF---KQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 + ++++ I+ + + T + P+ +L +I E++ Sbjct: 483 QWVNPNSVNAAQINALLKQPMQRESTLEAMIRRPEIKYLDLMNIEGLGPAVSDPKAAEQI 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y Y RQ+ E ++ K E L+P D DY + LSNE KL+ +KP ++ +AS Sbjct: 543 EIKIKYQGYIDRQLDEIEKSKRNENTLLPLDIDYQIVKGLSNEAIAKLNEMKPESIGKAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTVKLN 621 +I G+TPAA+++LLIY+KKN ++ N Sbjct: 603 RIPGITPAAISILLIYLKKNGLRRN 627 >gi|295678144|ref|YP_003606668.1| glucose inhibited division protein A [Burkholderia sp. CCGE1002] gi|295437987|gb|ADG17157.1| glucose inhibited division protein A [Burkholderia sp. CCGE1002] Length = 652 Score = 808 bits (2086), Expect = 0.0, Method: Composition-based stats. Identities = 284/631 (45%), Positives = 390/631 (61%), Gaps = 15/631 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + +DVIV+GGGHAG EAA +A++G T L+TH T+G MSCNP+IGG+GKGHLV+ Sbjct: 2 LFPTEFDVIVVGGGHAGTEAALASARMGNKTLLLTHNIETLGQMSCNPSIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DAL G M D +GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Sbjct: 62 EVDALGGAMAAATDESGIQFRILNSSKGPAVRATRAQADRVLYKAAIRHRLENQPNLWLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + + V Q R VVLT GTFL G IH+G GR GD + Sbjct: 122 QQAVDDLIVEGDRVVGAVTQVGIRFRSRAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAV 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTD-KITNRQI 238 SL + GRLKTGTP R+DG+TI + + E+Q D +P FSF+ + RQ+ Sbjct: 182 SLSARLKELKLPQGRLKTGTPPRIDGRTIDYSQLEEQPGDLDPVPVFSFLGRVEQHPRQV 241 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C +T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQI+LEPE Sbjct: 242 PCWVTHTNQRTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIYLEPE 301 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL T+ YPNGIST+LP ++Q + +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 302 GLTTNEFYPNGISTSLPFDVQLELVRSMQGLEHAHILRPGYAIEYDYFDPRGLKASLETK 361 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I+GLF AGQINGTTGYEEAAAQG++AGIN+ + C R +Y+GV++DDL ++ Sbjct: 362 VINGLFFAGQINGTTGYEEAAAQGVLAGINAGLFVQGKEAWCPRRDQAYLGVLVDDLVTR 421 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 GV EPYRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F++ + L Sbjct: 422 GVSEPYRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDDARWDAFSRKRDAVSRETQRL 481 Query: 479 KSLVLTSKNLS---STSISFKQDGKTRTAYEFLSYPDFSIQNLFSI------CPDARKFS 529 +S + K LS +T + K + + L P S + ++ P+A Sbjct: 482 RSTWVNPKTLSAEQATELLGKPIDHEYSLADLLRRPGVSYDGVCALRDGTCGAPEALAED 541 Query: 530 S----LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 + E+++I Y Y RQ E + + +E +P+ DY+ + LS E ++KL Sbjct: 542 PVLLGQIKEQIEIGVKYQGYIDRQAGEIERNEAQENTRLPEGLDYTEVRGLSFEARQKLM 601 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYIKKN 616 +P + QAS+I G+TPAA++LL++++K+ Sbjct: 602 QFRPETIGQASRISGITPAAISLLMVHLKRG 632 >gi|90581140|ref|ZP_01236939.1| glucose-inhibited division protein A [Vibrio angustum S14] gi|90437661|gb|EAS62853.1| glucose-inhibited division protein A [Vibrio angustum S14] Length = 629 Score = 808 bits (2086), Expect = 0.0, Method: Composition-based stats. Identities = 290/622 (46%), Positives = 388/622 (62%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 YQEKFDVIVVGGGHAGTEAALAAARMGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DAL GLM + D GIQFR LN KGPAVR R QADR LY+ A++ + +QENL V Q Sbjct: 63 VDALGGLMAQAIDKGGIQFRTLNSSKGPAVRATRAQADRALYKAAVRNVLENQENLMVFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E + +V + VVLT GTFL G IHIG GR GD SN+ Sbjct: 123 QAVTDLIVENHRAVGVVTEMGLKFHGKAVVLTVGTFLGGKIHIGMENYSGGRTGDPASNA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIEC 240 L + + RLKTGTP R+D +++ + E+Q D FSFM + RQI C Sbjct: 183 LADRLRELPLRVDRLKTGTPPRIDARSVDFSVLEEQHGDNPTPTFSFMGKSSDHPRQIPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEGL Sbjct: 243 FITYTNERTHEVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T+ +YPNGIST+LP ++Q Q +R++ G E I+RPGYAIEYD+ +P++L T E K I Sbjct: 303 TTNELYPNGISTSLPFDVQMQIVRSMQGFENATIMRPGYAIEYDFFDPRDLKQTFENKYI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQINGTTGYEEAAAQGL+AG+N+A + + R +Y+GV+IDDL++ G Sbjct: 363 DGLFFAGQINGTTGYEEAAAQGLMAGMNAALQVQDKEGWSPRRDQAYMGVLIDDLSTIGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLTP+G + G + + R RF + I+ R LK Sbjct: 423 KEPYRMFTSRAEYRLLLREDNADLRLTPMGREFGLVDDARWSRFNQKIENMELERQRLKD 482 Query: 481 LVLTSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERL 536 + + K+ I + + + L P+ + + L SI A E++ Sbjct: 483 IWINPKSDHVDELNKILKAPIAREASGEDLLRRPEVTYEQLTSIETFAPALDDIEAREQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y Y RQ E ++ E +P D DYS++ LSNE+ KL+ KP ++ AS Sbjct: 543 EIQVKYQGYIDRQRDEVEKSLRHETTKLPFDIDYSNVKGLSNEVVVKLNDAKPESIGMAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA++LLL+Y+KK+ + Sbjct: 603 RISGITPAAISLLLVYLKKHGL 624 >gi|307255565|ref|ZP_07537370.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307260016|ref|ZP_07541728.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306861414|gb|EFM93403.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306865852|gb|EFM97728.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 630 Score = 808 bits (2086), Expect = 0.0, Method: Composition-based stats. Identities = 295/623 (47%), Positives = 388/623 (62%), Gaps = 5/623 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + YDVIV+GGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 IYHEIYDVIVVGGGHAGTEAALAPARMGLKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDA+ GLM D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Sbjct: 62 EIDAMGGLMAIAIDQAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q EV E N V + + +VVLT GTFL G IHIG GR GD + Sbjct: 122 QQEVVDILVENNRAVGAVTKMGLTFKARSVVLTAGTFLAGKIHIGLDNYAGGRAGDPAAT 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIE 239 L + + RLKTGTP RLD +TI +D KQ D L SFM + RQI Sbjct: 182 MLADRLRDLNLRVDRLKTGTPPRLDARTINFDVLAKQHGDAELPVMSFMGSVDLHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I ++ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEG Sbjct: 242 CYITHTNEQTHDLIRNSLDRSPMYTGVIEGIGPRYCPSIEDKVMRFSDRNSHQIYLEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L+T VYPNGIST+LP ++Q + ++ GLEK II+PGYAIEYDY +P++L PTLETK Sbjct: 302 LSTIEVYPNGISTSLPFDVQMGIVNSMKGLEKTRIIKPGYAIEYDYFDPRDLKPTLETKA 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AGIN+A + + +R +Y GV++DDL + G Sbjct: 362 IEGLFFAGQINGTTGYEEAAAQGLLAGINAALQVQGKEAWFPTRDLAYTGVLVDDLCTLG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYR+FTSRAEYR+ LR DNAD RLTPI +LG I + R RF + ++ R LK Sbjct: 422 TKEPYRVFTSRAEYRLLLREDNADIRLTPIAHELGLIDDARWARFNQKMENIERERERLK 481 Query: 480 SLVLTSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIER 535 + + ++ + + + + L P+ + L + A E+ Sbjct: 482 QIWIHPQSEHLAVVNELVNSPLTREASGEDLLRRPEVTYDKLTQVAAFAPALDDKQAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I Y Y Q E + K E LIP +FDY + +LSNE++ KL +P ++ QA Sbjct: 542 VEISIKYQGYIEHQQNEIERHKRHENTLIPAEFDYDKVESLSNEVRAKLMQHRPVSIGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV 618 S+I G+TPAA+++LL+ +KK + Sbjct: 602 SRISGITPAAISILLVNLKKQGM 624 >gi|261420901|ref|YP_003254583.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Geobacillus sp. Y412MC61] gi|319768572|ref|YP_004134073.1| glucose inhibited division protein A [Geobacillus sp. Y412MC52] gi|261377358|gb|ACX80101.1| glucose inhibited division protein A [Geobacillus sp. Y412MC61] gi|317113438|gb|ADU95930.1| glucose inhibited division protein A [Geobacillus sp. Y412MC52] Length = 629 Score = 808 bits (2086), Expect = 0.0, Method: Composition-based stats. Identities = 276/619 (44%), Positives = 393/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAGCEAA +A++GA T +IT I M CNP+IGG KG +VREIDA Sbjct: 7 TYDVIVVGAGHAGCEAALASARIGAKTLVITLNLDMIAFMPCNPSIGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M + D IQ R+LN KGPAVR R QAD+ LY+ M++ + +QENL ++QG+V Sbjct: 67 LGGEMAKNIDKTYIQMRMLNTGKGPAVRALRAQADKVLYQREMKKTLENQENLTLLQGKV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ + VV+TTGTFLRG I IG +K +G PS L Sbjct: 127 ERLIVEDGVCKGVITHTGAHYYAKAVVITTGTFLRGEIIIGDIKYSSGPNNQQPSIKLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F+ R KTGTP R++ +TI + KTE Q D+ FS+ T K Q+ C +T Sbjct: 187 HLEELGFELVRFKTGTPPRVNSRTIDYSKTEIQPGDKEPRAFSYETTKYITDQLPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETHRII EN+ S +YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG T+ Sbjct: 247 TTEETHRIIDENLHLSPMYSGMIKGTGPRYCPSIEDKVVRFHDKPRHQIFLEPEGRETEE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE IQ + + TIPGLEK ++R GYAIEYD I P +L+PTLETK + L+ Sbjct: 307 VYVQGLSTSLPEHIQRKLLETIPGLEKAQLMRAGYAIEYDAIVPTQLWPTLETKLVKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QG++AGIN+A ++ + I SR+D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGIMAGINAAHRALGREEIILSRSDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G ++G I E R ++F + + L+++++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTELGYRIGLISEERYQKFLAKKEAIEREKKRLQTVIIK 486 Query: 485 S-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + S +DG A + L P+ + +++ + P + + V E+++I+ Sbjct: 487 PTPKVQEVIREAGGSELKDGIR--AADLLRRPEMTYEHIRKLAPADEEIAPEVAEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + E + +K E + IP+D DY + L+ E ++KL ++P ++ QAS+I Sbjct: 545 IKYEGYIQKSLQEVERLKKMENKKIPEDIDYDGIQGLATEARQKLKQVRPLSIAQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+Y+++ + Sbjct: 605 GVNPADISILLVYLEQGRI 623 >gi|229542321|ref|ZP_04431381.1| glucose inhibited division protein A [Bacillus coagulans 36D1] gi|229326741|gb|EEN92416.1| glucose inhibited division protein A [Bacillus coagulans 36D1] Length = 629 Score = 808 bits (2086), Expect = 0.0, Method: Composition-based stats. Identities = 281/619 (45%), Positives = 394/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDVIV+G GHAGCEA AA++GA T +IT I M CNP+IGG KG +VREIDA Sbjct: 8 DYDVIVVGAGHAGCEAGLAAARIGAKTLMITINLDMIAYMPCNPSIGGPAKGIVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAV+ R QAD+ Y+ M++ I +QENL ++QG V Sbjct: 68 LGGEMGRNIDKTYIQMRMLNTGKGPAVQALRAQADKVEYQREMKKTIENQENLTLLQGMV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + +V + + TVVLTTGTFLRG I IG+LK +G PS +L Sbjct: 128 EELVLEDGVCKGVVTKTGAKYTAKTVVLTTGTFLRGEIIIGELKYSSGPNNQQPSIALAE 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++GKTI + KTE Q D FS+ T K+ Q+ C +T Sbjct: 188 KLEELGFDLVRFKTGTPPRVNGKTIDYSKTEIQPGDLEPRAFSYETTKMITDQLPCWLTY 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ + ++SG IK GPRYCPSIEDK+VRF ++ HQ+FLEPEG +T+ Sbjct: 248 TNERTHAIIDANLGRAPMFSGMIKGTGPRYCPSIEDKVVRFHDKPRHQLFLEPEGRHTEE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST++PEE+Q + + +I GLE ++RPGYAIEYD I P +L+PTLETKK+ L+ Sbjct: 308 VYVQGLSTSMPEEVQREILASIEGLEHAKMMRPGYAIEYDAITPTQLWPTLETKKVKNLY 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QG++AGIN+A+++ + + R+D+YIGV+IDDL +KG EPY Sbjct: 368 TAGQINGTSGYEEAAGQGIIAGINAAQRAMGKEELVLGRSDAYIGVLIDDLVTKGTREPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT IG ++G I E R ++F Q LKS++L Sbjct: 428 RLLTSRAEYRLLLRHDNADLRLTEIGYQIGLISEERYRKFTAKKQAIEAEIKRLKSVILK 487 Query: 485 SKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + S +DG A + L P+ +++ ++ P + S V E+++I+ Sbjct: 488 PDEKTQTLIREAGGSELKDGI--HAADLLKRPEMRYEHIKALVPPEMELSPEVEEQVEIQ 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + + +K E + IP D DY ++ L+ E ++KL+ ++P ++ QAS+I Sbjct: 546 IKYEGYIAKSLQQVERMKKLEDKKIPSDIDYDAIHGLATEARQKLNKVRPISIAQASRIS 605 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 606 GVNPADISILLVYIEQGKI 624 >gi|52426409|ref|YP_089546.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Mannheimia succiniciproducens MBEL55E] gi|81170554|sp|Q65PZ9|MNMG_MANSM RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|52308461|gb|AAU38961.1| GidA protein [Mannheimia succiniciproducens MBEL55E] Length = 629 Score = 808 bits (2086), Expect = 0.0, Method: Composition-based stats. Identities = 290/622 (46%), Positives = 398/622 (63%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +YDVIVIGGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 YSENYDVIVIGGGHAGTEAALAPARMGLKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDA+ GLM AD AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q Sbjct: 63 IDAMGGLMATAADQAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVKVALENQPNLDIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 E E++ ++ + + + +V+LT GTFL G IHIG GR GD S + Sbjct: 123 QEATDILIEQDRVTGVATRMGLKFKTKSVILTAGTFLGGKIHIGLDNYTGGRAGDPASIA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIEC 240 L + + RLKTGTP RLD +TI +D KQ D +L FSFM + RQI C Sbjct: 183 LADRLRDLNLRVARLKTGTPPRLDARTINFDILAKQHGDAQLPVFSFMGSVDQHPRQIPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL Sbjct: 243 FITHTNEQTHEVIRNNLDRSPMYTGVIEGIGPRYCPSIEDKVMRFADRNSHQIYLEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + +YPNGIST+LP ++Q + + ++ GLEK I++PGYAIEYD+ +P++L PTLETK I Sbjct: 303 TSQEIYPNGISTSLPFDVQMKIVNSMVGLEKTRIVKPGYAIEYDFFDPRDLKPTLETKAI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQINGTTGYEEAA+QGL+AGIN+ + + R +Y+GV++DDL + G Sbjct: 363 KGLFFAGQINGTTGYEEAASQGLLAGINAGLFVQEKESWFPRRDQAYMGVLVDDLCTLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYR+FTSRAEYR+ LR DNAD+RLTPI +LG I E R RF + ++ R L++ Sbjct: 423 KEPYRVFTSRAEYRLLLREDNADSRLTPIAHELGLIDENRWARFNQKMENIERERQRLRN 482 Query: 481 LVLTSKNLSSTSISF---KQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERL 536 + + ++ I+ + + + L P+ + Q L ++ +E++ Sbjct: 483 IWIHPRSEHLDVINEVLSSPLVREASGEDLLRRPEINYQILTALDLFKPAMDDKEAVEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I Y Y Q E ++ K E IP +FDY+ + LSNE++ KL +P ++ QAS Sbjct: 543 EIAVKYQGYIEHQQEEIEKQKRHENTAIPDNFDYTLVAGLSNEVRAKLEQHRPVSIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA+++LL+ +KK + Sbjct: 603 RISGVTPAAISILLVNLKKQGM 624 >gi|312128798|ref|YP_003993672.1| glucose inhibited division protein a [Caldicellulosiruptor hydrothermalis 108] gi|311778817|gb|ADQ08303.1| glucose inhibited division protein A [Caldicellulosiruptor hydrothermalis 108] Length = 628 Score = 808 bits (2086), Expect = 0.0, Method: Composition-based stats. Identities = 276/614 (44%), Positives = 385/614 (62%), Gaps = 4/614 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDV V+G GHAG EAA +A+LG T + +IG+M CNP+IGG GKGHLVREIDA Sbjct: 7 EYDVAVVGAGHAGIEAALASARLGLKTIIFAINLDSIGNMPCNPSIGGTGKGHLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ ADA IQ R+LN KGPAV R Q DR YRL M++ + SQENLD+ Q EV Sbjct: 67 LGGEMGKAADATAIQVRILNRAKGPAVYSLRAQCDRSRYRLYMKKVLESQENLDIRQAEV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + + ++ VVL TGTFL G + IG+ +G G P+ L Sbjct: 127 CEVLVEDGRVKGVKITTGAIFLAKAVVLATGTFLGGKVIIGETVFDSGPDGMHPARYLTE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNRQIECGIT 243 + K + R KTGTPAR+ +++ + K + Q DE+ +PFSF D Q+ C +T Sbjct: 187 NLKKLGIEMMRFKTGTPARVHRRSLDFSKMQIQPGDEKPLPFSFENEDNFNIEQVPCYLT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 T ETHRII EN+ + +++G I GPRYCPSIEDK+VRF ++ HQ+F+EP GL+TD Sbjct: 247 YTTEETHRIIRENLHRAPLFTGLISGVGPRYCPSIEDKVVRFADKPRHQVFIEPTGLDTD 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G+ST+LPE++Q + R++ GLE V I+RP YAIEYD INP +L PTL+ KKI GL Sbjct: 307 EMYVQGMSTSLPEDVQVKMYRSVIGLENVKIMRPAYAIEYDCINPLQLEPTLQFKKIKGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGT+GYEEAAAQG++AGIN+A + + R+ +YIGV+IDDL +KG EP Sbjct: 367 FSAGQINGTSGYEEAAAQGIIAGINAAMYVKGKEMLILDRSQAYIGVLIDDLVTKGTNEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT IG K+G I ++R ++F + + + +K+ V+ Sbjct: 427 YRIMTSRAEYRLILRQDNADLRLTEIGYKIGLISQQRYEKFLQKKKMIEDEINRVKNTVI 486 Query: 484 TSKNLSSTSISFKQDGKTRT---AYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + + K T + L P+ S ++L I P V + ++IE Sbjct: 487 APSEKVNKLLQEKGSSPISTGVKLSDLLKRPELSYEDLKEIDPARPDLPWYVQDEVEIEI 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y +Q+ ++ K E + IP+ DYS + LS E K+KLS ++P ++ QAS+I G Sbjct: 547 KYEGYIKKQLERIEQFKKLENKKIPEWVDYSKIIGLSTEAKQKLSQIRPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIK 614 ++PA +++LLI+++ Sbjct: 607 VSPADISVLLIWLE 620 >gi|238795163|ref|ZP_04638752.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Yersinia intermedia ATCC 29909] gi|238725521|gb|EEQ17086.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Yersinia intermedia ATCC 29909] Length = 629 Score = 808 bits (2086), Expect = 0.0, Method: Composition-based stats. Identities = 293/619 (47%), Positives = 393/619 (63%), Gaps = 5/619 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA Sbjct: 6 QFDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLM D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 66 LGGLMAMATDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQPV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + V Q R VVLT GTFL G IHIG GR GD PS SL Sbjct: 126 EDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLQNYSGGRAGDPPSISLSQ 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGIT 243 + RLKTGTP R+D +TI + + Q D + FSF+ + + Q+ C IT Sbjct: 186 RLRELPLRVNRLKTGTPPRIDARTIDFSQLAPQLGDTPIPVFSFLGNASQHPEQMACHIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 246 YTNEKTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNSHQIFLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q Q +R++ GLE I+RPGYAIEYD+ +P++L PTLE+K I GL Sbjct: 306 EIYPNGISTSLPFDVQMQIVRSMKGLENARIVRPGYAIEYDFFDPRDLKPTLESKYIHGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+ R +N D R ++Y+GV++DDL++ G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGLNAGRFANDDDGWSPRRDEAYLGVLVDDLSTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT +G KLG + + R F+K I++ R L+ + + Sbjct: 426 YRMFTSRAEYRLMLREDNADLRLTEMGRKLGLVDDARWAHFSKKIEQIEKERQRLRDIWV 485 Query: 484 TSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIE 539 + + I+ K E L P+ + L ++ ++++I+ Sbjct: 486 HPHSENVDEINALLKAPLSKEANGEELLRRPEIDYRLLTTLPSFGPALTDPQAADQVEIQ 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ E ++ E L+P D DY + LSNE+ KL+ KP ++ QAS+I Sbjct: 546 VKYEGYIARQQEEIEKQLRNENTLLPTDLDYHQVSGLSNEVIAKLNDHKPNSIGQASRIS 605 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+TPAA+++LL+++KK + Sbjct: 606 GITPAAISILLVWLKKQGL 624 >gi|28872709|ref|NP_795328.1| glucose-inhibited division protein A [Pseudomonas syringae pv. tomato str. DC3000] gi|38257457|sp|Q87TS3|MNMG_PSESM RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|28855965|gb|AAO59023.1| glucose-inhibited division protein A [Pseudomonas syringae pv. tomato str. DC3000] Length = 630 Score = 807 bits (2085), Expect = 0.0, Method: Composition-based stats. Identities = 289/617 (46%), Positives = 386/617 (62%), Gaps = 5/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIREILENQPNLWIFQQACD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 127 DLIVEQDQVRGVVTQMGLRILADSVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + GRLKTGTP R+DG+++ + +Q D ++ SF+ K + Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPILVMSFLGSKEQHPAQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 247 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R+I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVRSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCTKRESIELEEQRLKSTWVR 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +IS L+ P+ +L ++ LV E+++I++ Sbjct: 487 PGTQQGDAISAHFGTPLTHEYNLLNLLTRPEIDYNSLIALTGQGCA-DPLVAEQVEIKTK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E ++ E +P+D DY+ + LS E++ KL I +P L QAS+I G+ Sbjct: 546 YAGYIDRQQEEIARLRASEDTRLPEDIDYTGISGLSKEIQSKLGITRPETLGQASRIPGV 605 Query: 602 TPAALNLLLIYIKKNTV 618 TPAA++LL+I++KK Sbjct: 606 TPAAISLLMIHLKKRGA 622 >gi|298489532|ref|ZP_07007541.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298155959|gb|EFH97070.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 630 Score = 807 bits (2085), Expect = 0.0, Method: Composition-based stats. Identities = 285/617 (46%), Positives = 385/617 (62%), Gaps = 5/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIRETLENQPNLWIFQQACD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L + Sbjct: 127 DLIVEQDQVRGVVTQMGMRIFADSVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAHR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ K + + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGSKEQHPPQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 247 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTRE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +++I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVQSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCTKRESIELEEQRLKSTWVR 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +I+ L+ P+ +L ++ V E+++I++ Sbjct: 487 PGTAQGDAIAEHFGTPLTHEYNLLNLLTRPEIDYASLIALTGQGCT-DPQVAEQVEIKTK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E ++ E +P+D DY+++ LS E++ KL I +P L QAS+I G+ Sbjct: 546 YAGYIDRQQDEIARLRASEDTRLPEDIDYAAISGLSKEIQSKLGITRPETLGQASRIPGV 605 Query: 602 TPAALNLLLIYIKKNTV 618 TPAA++LL+I++KK Sbjct: 606 TPAAISLLMIHLKKRGA 622 >gi|126440375|ref|YP_001060975.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei 668] gi|167826386|ref|ZP_02457857.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei 9] gi|167847905|ref|ZP_02473413.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei B7210] gi|226193173|ref|ZP_03788783.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei Pakistan 9] gi|254298691|ref|ZP_04966142.1| glucose-inhibited division protein A [Burkholderia pseudomallei 406e] gi|166222918|sp|A3NF54|MNMG_BURP6 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|126219868|gb|ABN83374.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei 668] gi|157808631|gb|EDO85801.1| glucose-inhibited division protein A [Burkholderia pseudomallei 406e] gi|225934773|gb|EEH30750.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei Pakistan 9] Length = 657 Score = 807 bits (2084), Expect = 0.0, Method: Composition-based stats. Identities = 289/629 (45%), Positives = 390/629 (62%), Gaps = 15/629 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DA Sbjct: 6 EFDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D GIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q V Sbjct: 66 LGGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRVLYKQAIRRRLENQPNLWLFQQAV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + V Q R VVLT GTFL G IH+G GR GD + SL + Sbjct: 126 DDLMVEGDRVVGAVTQVGVRFRARAVVLTAGTFLDGKIHVGLNHYTGGRAGDPAAVSLSS 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITNRQ-IECGI 242 + + GRLKTGTP R+DG+TI + K ++Q D IP FSF+ + Q + C + Sbjct: 186 RLKELNLPQGRLKTGTPPRIDGRTIDFSKLDEQPGDLDPIPVFSFLGRAEQHPQQLPCWV 245 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T Sbjct: 246 THTNERTHDIIRSGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLTT 305 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + YPNGIST+LP ++Q + ++ GLE+ +I+RPGYAIEYDY +P+ L +LETK I G Sbjct: 306 NEFYPNGISTSLPFDVQLALVHSMRGLEQAHILRPGYAIEYDYFDPRALKSSLETKAIGG 365 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AGIN+ R + + D C R +Y+GV++DDL ++GV E Sbjct: 366 LFFAGQINGTTGYEEAAAQGLLAGINAGRYAQEKDAWCPRRDQAYLGVLVDDLVTRGVSE 425 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F + + L++ Sbjct: 426 PYRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDDVRWDAFNRKRDAVSRETERLRTTW 485 Query: 483 LTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----------CPDARKFS 529 +T K L +T++ K + E L P S + + + Sbjct: 486 VTPKTLPVDEATALLGKPIDHEYSLAELLRRPGVSYDGVCGLRGGECGPSEPLAEDELLL 545 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 + + E+++I Y Y RQ E + E +P DY+ + LS E+ +KL+ +P Sbjct: 546 AQIKEQIEIGIKYQGYIERQAGEIERNGANENTRLPDGIDYTEVRGLSFEVSQKLNQFRP 605 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKKNTV 618 + QAS+I GMTPAA++LL++++KK + Sbjct: 606 ETIGQASRISGMTPAAISLLMVHLKKRGL 634 >gi|302880136|ref|YP_003848700.1| glucose inhibited division protein A [Gallionella capsiferriformans ES-2] gi|302582925|gb|ADL56936.1| glucose inhibited division protein A [Gallionella capsiferriformans ES-2] Length = 627 Score = 807 bits (2084), Expect = 0.0, Method: Composition-based stats. Identities = 289/616 (46%), Positives = 401/616 (65%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA V+A+ G T L++H T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALVSARAGCKTLLLSHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN KG AVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 67 GGAMALATDIGGIQFRILNSSKGYAVRATRAQADRMLYKQAIRTMLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ ++ +V Q TVVLT GTFL G+IH+G+ AGR GD PS SL + Sbjct: 127 DLLVEQDKVTGVVTQLGLRFSAKTVVLTAGTFLGGLIHVGQANYQAGRAGDPPSVSLSHR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK-ITNRQIECGITR 244 + + GRLKTGTP R+DG++I + ++Q D+ + FSFM ++ + RQ+ C IT Sbjct: 187 LRELNLPVGRLKTGTPPRIDGRSIDYSVLQEQPGDDPVPVFSFMGNRAMHPRQMPCWITE 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ TH II + S +++G I+ GPRYCPSIEDKI RF + HQIFLEPEGL T Sbjct: 247 TSERTHDIIRGGLDRSPLFTGAIEGVGPRYCPSIEDKITRFSGKTSHQIFLEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q +R+I G+E +I+RPGYAIEYDY NP L +LETK I GLF Sbjct: 307 IYPNGISTSLPFDVQLALVRSIKGMENAHILRPGYAIEYDYFNPCGLKSSLETKAIKGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N++ + ++D C R ++Y+GVM+DDL ++GV EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNASLQVREMDAWCPRRDEAYLGVMVDDLITQGVTEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG KLG + + R + F + + L+S ++ Sbjct: 427 RMFTSRAEYRLQLREDNADLRLTEIGRKLGIVDDARWQAFEIKREAIALEQQRLRSTWMS 486 Query: 485 SKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 +NL + + K + +E L PD + +L ++ V E+++I++ Sbjct: 487 PRNLPVEEAQRVLGKNIDHEYSLHELLLRPDVNYASLMTLPGAGEATPDPWVSEQVEIQA 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E K + E + +P D DY + LS E+++KL+ KP + QA++I G Sbjct: 547 KYQGYIDRQHAEIKSSERNEVQRLPSDLDYREVRGLSIEVQQKLNTHKPETVGQAARISG 606 Query: 601 MTPAALNLLLIYIKKN 616 +TPAA++LLL+++K+ Sbjct: 607 ITPAAISLLLVHLKRG 622 >gi|303249898|ref|ZP_07336100.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307250950|ref|ZP_07532876.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307253322|ref|ZP_07535194.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302650961|gb|EFL81115.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306856978|gb|EFM89108.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306859186|gb|EFM91227.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 630 Score = 807 bits (2084), Expect = 0.0, Method: Composition-based stats. Identities = 295/623 (47%), Positives = 388/623 (62%), Gaps = 5/623 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + YDVIV+GGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 IYHEIYDVIVVGGGHAGTEAALAPARMGLKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDA+ GLM D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Sbjct: 62 EIDAMGGLMAIAIDQAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q EV E N V + + +VVLT GTFL G IHIG GR GD + Sbjct: 122 QQEVVDILVENNRAVGAVTKMGLTFKARSVVLTAGTFLAGKIHIGLDNYAGGRAGDPAAT 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIE 239 L + + RLKTGTP RLD +TI +D KQ D L SFM + RQI Sbjct: 182 MLADRLRDLNLRVDRLKTGTPPRLDARTINFDVLAKQHGDAELPVMSFMGSVDLHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I ++ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEG Sbjct: 242 CYITHTNEQTHDLIRNSLDRSPMYTGIIEGIGPRYCPSIEDKVMRFSDRNSHQIYLEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L+T VYPNGIST+LP ++Q + ++ GLEK II+PGYAIEYDY +P++L PTLETK Sbjct: 302 LSTIEVYPNGISTSLPFDVQMGIVNSMKGLEKTRIIKPGYAIEYDYFDPRDLKPTLETKA 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AGIN+A + + +R +Y GV++DDL + G Sbjct: 362 IEGLFFAGQINGTTGYEEAAAQGLLAGINAALQVQGKEAWFPTRDLAYTGVLVDDLCTLG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYR+FTSRAEYR+ LR DNAD RLTPI +LG I + R RF + ++ R LK Sbjct: 422 TKEPYRVFTSRAEYRLLLREDNADIRLTPIAHELGLIDDARWARFNQKMENIERERERLK 481 Query: 480 SLVLTSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIER 535 + + ++ + + + + L P+ + L + A E+ Sbjct: 482 QIWIHPQSEHLAVVNELVNSPLTREASGEDLLRRPEVTYDKLTQVAAFAPALDDKQAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I Y Y Q E + K E LIP +FDY + +LSNE++ KL +P ++ QA Sbjct: 542 VEISIKYQGYIEHQQNEIERHKRHENTLIPAEFDYDKVESLSNEVRAKLMQHRPVSIGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV 618 S+I G+TPAA+++LL+ +KK + Sbjct: 602 SRISGITPAAISILLVNLKKQGM 624 >gi|254788523|ref|YP_003075952.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Teredinibacter turnerae T7901] gi|259495854|sp|C5BKL4|MNMG_TERTT RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|237684306|gb|ACR11570.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Teredinibacter turnerae T7901] Length = 630 Score = 807 bits (2084), Expect = 0.0, Method: Composition-based stats. Identities = 285/622 (45%), Positives = 390/622 (62%), Gaps = 5/622 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + +DVIVIGGGHAG EA AA++G T L++H T+G MSCNPAIGG+GK HLV+ Sbjct: 2 IFPDKFDVIVIGGGHAGTEACLAAARMGCKTLLLSHNIETLGQMSCNPAIGGIGKSHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G M + D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Sbjct: 62 EIDALGGAMAKATDKGGIQFRVLNNRKGPAVRATRAQADRVLYKAAVREILENQPNLTIF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q E + +V Q TVVLT GTFL G IHIG GR GD PS Sbjct: 122 QQAADDLVVEGETVRGVVTQMGVTFLAPTVVLTAGTFLGGRIHIGLENHSGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQIE 239 +L + + RLKTGTP R+D +++ +D ++Q+ D+ SF+ + RQ Sbjct: 182 ALADRLRELPLRVDRLKTGTPPRIDARSVNFDGLDEQWGDKPTPVMSFLGSQDDHPRQTC 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +T TN TH II S +++G I+ GPRYCPSIEDK+ RF ++N HQIF+EPEG Sbjct: 242 CWVTHTNERTHDIIRSGFDRSPMFTGVIEGVGPRYCPSIEDKVNRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP +IQ +R+I G E +I+RPGYAIEYD+ NP++L +LETK Sbjct: 302 LTTHELYPNGISTSLPFDIQLALVRSIKGFENAHIVRPGYAIEYDFFNPQDLQYSLETKV 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 ISGLF AGQINGTTGYEEA AQGL+AG N+A K+ + C R +Y+GV++DDL + G Sbjct: 362 ISGLFFAGQINGTTGYEEAGAQGLLAGANAALKAQGKEPWCPERDQAYMGVLVDDLITMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT G +LG + + R F + ++ ++ Sbjct: 422 TREPYRMFTSRAEYRLLLREDNADLRLTEKGRELGLVDDIRWAAFCEKREQIEQETQRMR 481 Query: 480 SLVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 S + + + + ++ K + + + L P+ + +L + +A + V E++ Sbjct: 482 STWVQANSAEALQLADKLTAPLNREYSLLDLLKRPELTYADLGHLKGEAVA-NVQVAEQV 540 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I + YA Y RQ E ++ E IP FDY S+ LSNELK+KL+ +P N+ +AS Sbjct: 541 EITAKYAGYIDRQQDEIARLRQHENTPIPASFDYDSVEGLSNELKQKLNEARPDNIARAS 600 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA++LL+IY+KK + Sbjct: 601 RIPGITPAAISLLVIYLKKRGM 622 >gi|317131001|ref|YP_004097283.1| glucose inhibited division protein A [Bacillus cellulosilyticus DSM 2522] gi|315475949|gb|ADU32552.1| glucose inhibited division protein A [Bacillus cellulosilyticus DSM 2522] Length = 628 Score = 807 bits (2084), Expect = 0.0, Method: Composition-based stats. Identities = 278/619 (44%), Positives = 391/619 (63%), Gaps = 3/619 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDVIVIG GHAG EA AA++GA+T ++T + M CNP++GG KG +VRE+DA Sbjct: 7 EYDVIVIGAGHAGVEAGLAAARMGANTLMLTLNLDAVAYMPCNPSVGGPAKGIVVREVDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M + D IQ R+LN KGPAVR R QAD+ LY+ M++ I ENL + QG V Sbjct: 67 LGGEMAKNIDKTHIQMRMLNTGKGPAVRALRAQADKFLYQHEMKKTIEETENLLLRQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ ++ Q + +VV+TTGT+LRG + IG L +G PS +L Sbjct: 127 ERLIIENDKVTGVITQTGAEYYAKSVVITTGTYLRGKVIIGDLSYESGPNNQQPSVNLSY 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F+ R KTGTP R++ +TI + KTE Q DE FS+ T K Q+ C +T Sbjct: 187 HLQELGFEMVRFKTGTPPRVNSQTIDYSKTEIQPGDEVPRAFSYETTKYITDQLPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN ETH II N+ S +YSG I+ GPRYCPSIEDKIVRF ++ HQIFLEPEG NT Sbjct: 247 TNDETHSIINSNLDRSPMYSGMIEGTGPRYCPSIEDKIVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++QH +R+IPGLE V ++RPGYAIEYD I P +L+P+LETKKI GLF Sbjct: 307 VYVQGLSTSLPEDVQHHILRSIPGLEGVTMMRPGYAIEYDAIVPTQLWPSLETKKIEGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+ARK+ + + R+D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAARKAQNKESVILKRSDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT IG ++G I R +F ++ + L S ++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEIGHEIGLIKSERFDQFLSKKEQIEREKDRLASTIVK 486 Query: 485 SKNLSS---TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 ++ T I + L P+ + ++ I P K V E+++I+ Sbjct: 487 VTEETNQFLTEIGSSPLKEPMYGVGLLKRPEITYTHIAQIVPPLEKLDDDVAEQVEIQVK 546 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y +Q+ + ++K E + +P+D DY ++ L+ E K+KLS ++P ++ QAS++ G+ Sbjct: 547 YEGYISKQLEQVDKLKKMENKKLPEDLDYHAINGLATEAKQKLSEVRPLSMAQASRVSGV 606 Query: 602 TPAALNLLLIYIKKNTVKL 620 PA +++LL+Y+++ ++ Sbjct: 607 NPADVSILLVYMEQGKLQK 625 >gi|330964187|gb|EGH64447.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas syringae pv. actinidiae str. M302091] Length = 630 Score = 806 bits (2083), Expect = 0.0, Method: Composition-based stats. Identities = 288/617 (46%), Positives = 385/617 (62%), Gaps = 5/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VI+IGGGHAG EAA +A++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIIIGGGHAGTEAALASARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIREILENQPNLWIFQQACD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q I +VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 127 DLIVEQDQVRGVVTQMGLRILADSVVLTTGTFLGGLIHIGMQNYSGGRAGDPPSIALAQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ K + Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGSKEQHPAQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 247 TNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R+I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVRSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCTKRESIELEEQRLKSTWVR 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +IS L+ P+ +L ++ LV E+++I++ Sbjct: 487 PGTEQGDAISAHFGTPLTHEYNLLNLLTRPEIDYNSLIALTGQGCT-DPLVAEQVEIKTK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E ++ E +P+D DY+ + LS E++ KL I +P L QAS+I G+ Sbjct: 546 YAGYIDRQQDEIARLRASEDTRLPEDIDYTGISGLSKEIQSKLGITRPETLGQASRIPGV 605 Query: 602 TPAALNLLLIYIKKNTV 618 TPAA++LL+I++KK Sbjct: 606 TPAAISLLMIHLKKRGA 622 >gi|268593523|ref|ZP_06127744.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Providencia rettgeri DSM 1131] gi|291310947|gb|EFE51400.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Providencia rettgeri DSM 1131] Length = 629 Score = 806 bits (2083), Expect = 0.0, Method: Composition-based stats. Identities = 289/620 (46%), Positives = 389/620 (62%), Gaps = 5/620 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLVREID Sbjct: 5 EQFDVIVIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVREID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL GLM D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NL + Q Sbjct: 65 ALGGLMATATDKAGIQFRTLNASKGPAVRATRAQADRVLYRQAVRMALENQPNLMIFQQP 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E N ++ + + + VVLT GTFL G IHIG GR GD PS SL Sbjct: 125 VEDLIVENNRVTGAITRMGLKFKAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPSISLS 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGI 242 + RLKTGTP R+D +TI + + +Q D+ + FSF+ + + Q + C I Sbjct: 185 QRLRELPLRVNRLKTGTPPRIDARTIDFSQLAQQLGDDPMPVFSFLGSQDQHPQQMPCHI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +++ HQIFLEPEGL + Sbjct: 245 TYTNEKTHEVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKDSHQIFLEPEGLTS 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + +YPNGIST+LP ++Q Q + ++ G+E IIRPGYAIEYD+ +P++L TLE+K I G Sbjct: 305 NEIYPNGISTSLPFDVQMQIVHSMKGMENARIIRPGYAIEYDFFDPRDLKQTLESKFIDG 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEA AQGL+AG+N+A+ + L+ R +YIGV++DDL + G E Sbjct: 365 LFFAGQINGTTGYEEAGAQGLLAGLNAAQHAFGLEGWFPRRDQAYIGVLVDDLCTLGTKE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT G +LG + + R F ++ R LK + Sbjct: 425 PYRMFTSRAEYRLMLREDNADLRLTEKGRELGLVDDVRWAHFNNKVELIEKERQRLKDIW 484 Query: 483 LTSKNLSST---SISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQI 538 + K+ + T I K + L P+ + + L S+ A ++++I Sbjct: 485 VHPKSDNHTEIDGILTVPLSKEANGEDLLRRPEMTYKMLTSLNLFAPGIDDPQAADQVEI 544 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + Y Y RQ E + E L+P D DY + LSNE+ KL+ KP ++ QAS+I Sbjct: 545 QVKYEGYIARQKEEIERQLRNENTLLPVDLDYKQVKGLSNEVMAKLNDHKPTSIGQASRI 604 Query: 599 EGMTPAALNLLLIYIKKNTV 618 G+TPAA+++LL+++KK + Sbjct: 605 SGITPAAISILLVWLKKQGM 624 >gi|254186501|ref|ZP_04893018.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei Pasteur 52237] gi|157934186|gb|EDO89856.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei Pasteur 52237] Length = 657 Score = 806 bits (2083), Expect = 0.0, Method: Composition-based stats. Identities = 289/629 (45%), Positives = 390/629 (62%), Gaps = 15/629 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DA Sbjct: 6 EFDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D GIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q V Sbjct: 66 LGGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRVLYKQAIRRRLENQPNLWLFQQAV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + V Q R VVLT GTFL G IH+G GR GD + SL + Sbjct: 126 DDLMVEGDRVVGAVTQVGVRFRARAVVLTAGTFLDGKIHVGLNHYTGGRAGDPAAVSLSS 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITNRQ-IECGI 242 + + GRLKTGTP R+DG+TI + K ++Q D IP FSF+ + Q + C + Sbjct: 186 RLKELNLPQGRLKTGTPPRIDGRTIDFSKLDEQPGDLDPIPVFSFLGRAEQHPQQLPCWV 245 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T Sbjct: 246 THTNERTHDIIRSGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLTT 305 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + YPNGIST+LP ++Q + ++ GLE+ +I+RPGYAIEYDY +P+ L +LETK I G Sbjct: 306 NEFYPNGISTSLPFDVQLALVHSMRGLEQAHILRPGYAIEYDYFDPRALKSSLETKAIGG 365 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AGIN+ R + + D C R +Y+GV++DDL ++GV E Sbjct: 366 LFFAGQINGTTGYEEAAAQGLLAGINAGRYAQEKDAWCPRRDQAYLGVLVDDLVTRGVSE 425 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F + + L++ Sbjct: 426 PYRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDDVRWDAFNRKRDAVSRETERLRTTW 485 Query: 483 LTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----------CPDARKFS 529 +T K L +T++ K + E L P S + + + Sbjct: 486 VTPKTLPADEATALLGKPIDHEYSLAELLRRPGVSYDGVCGLRGGECGPSEPLAEDELLL 545 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 + + E+++I Y Y RQ E + E +P DY+ + LS E+ +KL+ +P Sbjct: 546 AQIKEQIEIGIKYQGYIERQAGEIERNGANENTRLPDGIDYTEVRGLSFEVSQKLNQFRP 605 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKKNTV 618 + QAS+I GMTPAA++LL++++KK + Sbjct: 606 ETIGQASRISGMTPAAISLLMVHLKKRGL 634 >gi|53724003|ref|YP_104449.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia mallei ATCC 23344] gi|121598310|ref|YP_994646.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia mallei SAVP1] gi|124385197|ref|YP_001027579.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia mallei NCTC 10229] gi|126449480|ref|YP_001082523.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia mallei NCTC 10247] gi|126451633|ref|YP_001068275.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei 1106a] gi|167001264|ref|ZP_02267063.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia mallei PRL-20] gi|167721836|ref|ZP_02405072.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei DM98] gi|217423848|ref|ZP_03455348.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei 576] gi|238561559|ref|ZP_00441828.2| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia mallei GB8 horse 4] gi|242316407|ref|ZP_04815423.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei 1106b] gi|254174970|ref|ZP_04881631.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia mallei ATCC 10399] gi|254194591|ref|ZP_04901022.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei S13] gi|254201525|ref|ZP_04907889.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia mallei FMH] gi|254206863|ref|ZP_04913214.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia mallei JHU] gi|254357415|ref|ZP_04973689.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia mallei 2002721280] gi|81170532|sp|Q62FS8|MNMG_BURMA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|166222914|sp|A3MQI7|MNMG_BURM7 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|166222915|sp|A2S6L0|MNMG_BURM9 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|166222916|sp|A1V8U3|MNMG_BURMS RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|166222917|sp|A3P104|MNMG_BURP0 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|52427426|gb|AAU48019.1| glucose-inhibited division protein A [Burkholderia mallei ATCC 23344] gi|121227120|gb|ABM49638.1| glucose-inhibited division protein A [Burkholderia mallei SAVP1] gi|124293217|gb|ABN02486.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia mallei NCTC 10229] gi|126225275|gb|ABN88815.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei 1106a] gi|126242350|gb|ABO05443.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia mallei NCTC 10247] gi|147747419|gb|EDK54495.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia mallei FMH] gi|147752405|gb|EDK59471.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia mallei JHU] gi|148026479|gb|EDK84564.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia mallei 2002721280] gi|160696015|gb|EDP85985.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia mallei ATCC 10399] gi|169651341|gb|EDS84034.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei S13] gi|217392911|gb|EEC32933.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei 576] gi|238524328|gb|EEP87761.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia mallei GB8 horse 4] gi|242139646|gb|EES26048.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei 1106b] gi|243062887|gb|EES45073.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia mallei PRL-20] Length = 657 Score = 806 bits (2083), Expect = 0.0, Method: Composition-based stats. Identities = 289/629 (45%), Positives = 390/629 (62%), Gaps = 15/629 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DA Sbjct: 6 EFDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D GIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q V Sbjct: 66 LGGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRVLYKQAIRRRLENQPNLWLFQQAV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + V Q R VVLT GTFL G IH+G GR GD + SL + Sbjct: 126 DDLMVEGDRVVGAVTQVGVRFRARAVVLTAGTFLDGKIHVGLNHYTGGRAGDPAAVSLSS 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITNRQ-IECGI 242 + + GRLKTGTP R+DG+TI + K ++Q D IP FSF+ + Q + C + Sbjct: 186 RLKELNLPQGRLKTGTPPRIDGRTIDFSKLDEQPGDLDPIPVFSFLGRAEQHPQQLPCWV 245 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T Sbjct: 246 THTNERTHDIIRSGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLTT 305 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + YPNGIST+LP ++Q + ++ GLE+ +I+RPGYAIEYDY +P+ L +LETK I G Sbjct: 306 NEFYPNGISTSLPFDVQLALVHSMRGLEQAHILRPGYAIEYDYFDPRALKSSLETKAIGG 365 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AGIN+ R + + D C R +Y+GV++DDL ++GV E Sbjct: 366 LFFAGQINGTTGYEEAAAQGLLAGINAGRYAQEKDAWCPRRDQAYLGVLVDDLVTRGVSE 425 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F + + L++ Sbjct: 426 PYRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDDVRWDAFNRKRDAVSRETERLRTTW 485 Query: 483 LTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----------CPDARKFS 529 +T K L +T++ K + E L P S + + + Sbjct: 486 VTPKTLPADEATALLGKPIDHEYSLAELLRRPGVSYDGVCGLRGGECGPSEPLAEDELLL 545 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 + + E+++I Y Y RQ E + E +P DY+ + LS E+ +KL+ +P Sbjct: 546 AQIKEQIEIGIKYQGYIERQAGEIERNGANENTRLPDGIDYTEVRGLSFEVSQKLNQFRP 605 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKKNTV 618 + QAS+I GMTPAA++LL++++KK + Sbjct: 606 ETIGQASRISGMTPAAISLLMVHLKKRGL 634 >gi|32034340|ref|ZP_00134540.1| COG0445: NAD/FAD-utilizing enzyme apparently involved in cell division [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126209119|ref|YP_001054344.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Actinobacillus pleuropneumoniae L20] gi|166222902|sp|A3N2V3|MNMG_ACTP2 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|126097911|gb|ABN74739.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 630 Score = 806 bits (2083), Expect = 0.0, Method: Composition-based stats. Identities = 295/623 (47%), Positives = 388/623 (62%), Gaps = 5/623 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + YDVIV+GGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 IYHEIYDVIVVGGGHAGTEAALAPARMGLKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDA+ GLM D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Sbjct: 62 EIDAMGGLMAIAIDQAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q EV E N V + + +VVLT GTFL G IHIG GR GD + Sbjct: 122 QQEVVDILVENNRAVGAVTKMGLTFKARSVVLTAGTFLAGKIHIGLDNYAGGRAGDPAAT 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIE 239 L + + RLKTGTP RLD +TI +D KQ D L SFM + RQI Sbjct: 182 MLADRLRDLNLRVDRLKTGTPPRLDARTINFDVLAKQHGDAELPVMSFMGSVDLHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I ++ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEG Sbjct: 242 CHITHTNEQTHDLIRNSLDRSPMYTGIIEGIGPRYCPSIEDKVMRFSDRNSHQIYLEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L+T VYPNGIST+LP ++Q + ++ GLEK II+PGYAIEYDY +P++L PTLETK Sbjct: 302 LSTIEVYPNGISTSLPFDVQMGIVNSMKGLEKTRIIKPGYAIEYDYFDPRDLKPTLETKA 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AGIN+A + + +R +Y GV++DDL + G Sbjct: 362 IEGLFFAGQINGTTGYEEAAAQGLLAGINAALQVQGKEAWFPTRDLAYTGVLVDDLCTLG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYR+FTSRAEYR+ LR DNAD RLTPI +LG I + R RF + ++ R LK Sbjct: 422 TKEPYRVFTSRAEYRLLLREDNADIRLTPIAHELGLIDDARWARFNQKMENIERERERLK 481 Query: 480 SLVLTSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIER 535 + + ++ + + + + L P+ + L + A E+ Sbjct: 482 QIWIHPQSEHLAVVNELVNSPLTREASGEDLLRRPEVTYDKLTQVAAFAPALDDKQAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I Y Y Q E + K E LIP +FDY + +LSNE++ KL +P ++ QA Sbjct: 542 VEISIKYQGYIEHQQNEIERHKRHENTLIPAEFDYDKVESLSNEVRAKLMQHRPVSIGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV 618 S+I G+TPAA+++LL+ +KK + Sbjct: 602 SRISGITPAAISILLVNLKKQGM 624 >gi|330447281|ref|ZP_08310931.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491472|dbj|GAA05428.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 629 Score = 806 bits (2082), Expect = 0.0, Method: Composition-based stats. Identities = 291/622 (46%), Positives = 392/622 (63%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 YQEKFDVIVVGGGHAGTEAALAAARMGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DAL GLM + D GIQFR LN KGPAVR R QADR LY+ A++ + +QENL + Q Sbjct: 63 VDALGGLMAKAIDKGGIQFRTLNSSKGPAVRATRAQADRALYKAAVRNVLENQENLMIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E + + +V + R TVVLT GTFL G IHIG GR GD S + Sbjct: 123 QAVTDLIVENDRAAGVVTEMGLKFRSKTVVLTVGTFLGGKIHIGLENYSGGRTGDPASIA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIEC 240 L + + RLKTGTP R+D +++ + E Q D FSFM + + RQI C Sbjct: 183 LADRLRELPLRVDRLKTGTPPRIDARSVDFSVLETQHGDNPTPTFSFMGKQSDHPRQIPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEGL Sbjct: 243 FITYTNERTHEVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T+ +YPNGIST+LP ++Q Q +R++ G E I+RPGYAIEYD+ +P++L T E K I Sbjct: 303 TTNELYPNGISTSLPFDVQMQIVRSMKGFENATIVRPGYAIEYDFFDPRDLKQTFENKYI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQINGTTGYEEAAAQGL+AG+N+A ++ + R ++Y+GV+IDDL++ G Sbjct: 363 DGLFFAGQINGTTGYEEAAAQGLMAGMNAALQAQDKEGWSPRRDEAYMGVLIDDLSTIGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLTP G +LG + + R RF + ++ R LK Sbjct: 423 KEPYRMFTSRAEYRLLLREDNADLRLTPKGRELGLVDDERWARFNQKLENMELERQRLKD 482 Query: 481 LVLTSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERL 536 + + K+ I + + + L P+ S + L +I A E++ Sbjct: 483 IWINPKSDHVDELNKILKAPITREASGEDLLRRPEVSYEQLTAIETFAPAHEDVEAREQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y Y RQ E ++ EK +P D DYS + LSNE+ KL+ KP ++ AS Sbjct: 543 EIQVKYQGYIDRQREEVEKSLRHEKTKLPFDLDYSQVKGLSNEVVAKLTDAKPESIGMAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA++LLL+Y+KK+ + Sbjct: 603 RISGITPAAISLLLVYLKKHGL 624 >gi|261346698|ref|ZP_05974342.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Providencia rustigianii DSM 4541] gi|282565098|gb|EFB70633.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Providencia rustigianii DSM 4541] Length = 629 Score = 806 bits (2082), Expect = 0.0, Method: Composition-based stats. Identities = 288/620 (46%), Positives = 392/620 (63%), Gaps = 5/620 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLVREID Sbjct: 5 EQFDVIVIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVREID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL GLM D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NL + Q Sbjct: 65 ALGGLMATATDKAGIQFRTLNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQP 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E N ++ V + + +VVLT GTFL G IHIG GR GD P+ SL Sbjct: 125 VEDLIVENNRVTGAVTRMGLKFKAKSVVLTVGTFLDGKIHIGLENYSGGRAGDPPAISLS 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGI 242 + RLKTGTP R+D +TI + + +Q D+ + FSF+ + + Q + C I Sbjct: 185 QRLRELPLRVNRLKTGTPPRIDARTIDFSQLAQQLGDDPMPVFSFLGSQEQHPQQVPCYI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIFLEPEGL + Sbjct: 245 TYTNEQTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADKNAHQIFLEPEGLTS 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + +YPNGIST+LP ++Q + + ++ G+E I+RPGYAIEYD+ +P++L TLE+K I G Sbjct: 305 NEIYPNGISTSLPFDVQMKIVHSMKGMENARIVRPGYAIEYDFFDPRDLKQTLESKFIEG 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AG+N+A+ + L+ R +Y+GV++DDL + G E Sbjct: 365 LFFAGQINGTTGYEEAAAQGLLAGLNAAQHAFDLEGWFPRRDQAYVGVLVDDLCTLGTKE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT G +LG + + R + F + ++ R LK + Sbjct: 425 PYRMFTSRAEYRLMLREDNADLRLTEKGRELGLVDDVRWEHFNRKVEMIEKERQRLKDIW 484 Query: 483 LTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQI 538 + K+ + I K + L P+ + Q L S+ A ++++I Sbjct: 485 VHPKSDNHEEIDQILSVPLSKEANGEDLLRRPEMTYQMLTSLNLFAPGVEDPQAADQVEI 544 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + Y Y RQ E + E L+P D DY + LSNE+ KL+ KP ++ QAS+I Sbjct: 545 QVKYEGYIARQQEEIERQLRNENTLLPVDLDYKQVKGLSNEVMAKLNDHKPTSIGQASRI 604 Query: 599 EGMTPAALNLLLIYIKKNTV 618 G+TPAA+++LL+++KK + Sbjct: 605 SGITPAAISILLVWLKKQGM 624 >gi|205831546|sp|A4GAI2|MNMG_HERAR RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|193222447|emb|CAL63519.2| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA (Glucose-inhibited division protein A) [Herminiimonas arsenicoxydans] Length = 645 Score = 806 bits (2082), Expect = 0.0, Method: Composition-based stats. Identities = 292/631 (46%), Positives = 396/631 (62%), Gaps = 12/631 (1%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + +DVIV+GGGHAG EAA +A++G ST L+TH T+G MSCNP+IGG+GKGHLVR Sbjct: 2 IFPTKFDVIVVGGGHAGTEAALASARMGQSTLLLTHNIETLGQMSCNPSIGGIGKGHLVR 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ G M D AGIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Sbjct: 62 EVDAMGGAMAIATDEAGIQFRILNSSKGPAVRATRAQADRILYKQAIRSRLENQPNLWLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + + V Q R VVLT GTFL G IHIG AGR GD P+ Sbjct: 122 QQGVDDLLVEGDRVVGAVTQAGIQFRARAVVLTAGTFLDGKIHIGMNNYSAGRAGDPPAI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTD-KITNRQI 238 SL + GRLKTGTP R+DG++I + +Q D IP FS M + +Q+ Sbjct: 182 SLSARLKELKLPQGRLKTGTPPRIDGRSIDFSVMTEQPGDLDPIPVFSVMGSVAMHPQQM 241 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C IT TN +TH +I + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPE Sbjct: 242 PCWITHTNEKTHELIRGGLDRSPMYTGMIEGVGPRYCPSIEDKIHRFAGKESHQIFLEPE 301 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL T+ YPNGIST+LP ++Q ++++ GLE +I+RPGYAIEYDY +P+ L TLETK Sbjct: 302 GLTTNEYYPNGISTSLPFDVQLALVQSMRGLEHAHILRPGYAIEYDYFDPRGLKATLETK 361 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I GLF AGQINGTTGYEEAAAQG++AGIN+A + + D R ++Y+GV++DDL ++ Sbjct: 362 VIQGLFFAGQINGTTGYEEAAAQGMLAGINAALQIQERDAWTPRRDEAYLGVLVDDLITQ 421 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 GVLEPYRMFTSRAEYR+SLR DNAD RLT +G +LGC+G+ + F + L Sbjct: 422 GVLEPYRMFTSRAEYRLSLREDNADMRLTDVGRQLGCVGDVQWALFETKREAVARELERL 481 Query: 479 KSLVLTSK---NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI-CPDARKF------ 528 +S ++ + + + K + + L P+ + + L S+ D + Sbjct: 482 RSTWVSPRILAEAEAERVLGKGIEREYALADLLRRPNVTYETLMSLKGMDGQDLGGPGVA 541 Query: 529 SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 V E+++I+ YA Y RQ E + E +P +FDY ++ LS E+++KL+ + Sbjct: 542 EPAVREQVEIQLKYAGYIDRQAREVERHDHYENLKLPAEFDYMAVKGLSIEVRQKLTKQR 601 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 P L QAS+I G+TPAA++L+L+++KK K Sbjct: 602 PETLGQASRISGVTPAAISLMLVHLKKGGFK 632 >gi|330822706|ref|YP_004386009.1| glucose inhibited division protein A [Alicycliphilus denitrificans K601] gi|329308078|gb|AEB82493.1| glucose inhibited division protein A [Alicycliphilus denitrificans K601] Length = 677 Score = 806 bits (2082), Expect = 0.0, Method: Composition-based stats. Identities = 291/642 (45%), Positives = 389/642 (60%), Gaps = 23/642 (3%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + +DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNP+IGG+GKGHLV+ Sbjct: 20 LYPQEFDVIVVGGGHAGTEAALAAARMGCRTLLLTHNIETLGQMSCNPSIGGIGKGHLVK 79 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DAL G M D GIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Sbjct: 80 EVDALGGAMALATDEGGIQFRILNSSKGPAVRATRAQADRILYKAAIRRMLENQPNLWLF 139 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + ++ V Q R VVLT GTFL G IH+G AGR GD P+ Sbjct: 140 QQAVDDLMVEGDRVAGAVTQIGLRFRARAVVLTAGTFLDGRIHVGLNNYAAGRAGDPPAV 199 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERL--------IPFSFM-TD 231 SL + GRLKTGTP R+DG++I + + E+Q D FSFM + Sbjct: 200 SLSARLKELKLPQGRLKTGTPPRIDGRSIDFSQCEEQPGDGMPGGVNEGVLPVFSFMGST 259 Query: 232 KITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGH 291 + RQ+ C IT TN TH II S +++G I+ GPRYCPS+EDKI RF ++ H Sbjct: 260 VMHPRQVPCWITHTNARTHEIIRSGFDRSPMFTGKIEGVGPRYCPSVEDKINRFADKESH 319 Query: 292 QIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKEL 351 QIFLEPEGL T YPNGIST+LP +IQ+ +R++ GLE +I+RPGYAIEYDY +P+ L Sbjct: 320 QIFLEPEGLTTHEFYPNGISTSLPFDIQYALVRSMRGLENAHILRPGYAIEYDYFDPRSL 379 Query: 352 FPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 + ET++I GLF AGQINGTTGYEEAAAQGL AG+N+A + R ++Y+GV+ Sbjct: 380 KSSFETRQIQGLFFAGQINGTTGYEEAAAQGLFAGLNAALQCRGEAPWLPRRDEAYLGVL 439 Query: 412 IDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEY 471 +DDL +KGV EPYRMFTSRAE+R+ LR DNAD RLT G ++G + + R FA Sbjct: 440 VDDLVTKGVTEPYRMFTSRAEFRLQLREDNADMRLTEAGRRMGLVDDARWDAFAAKRDAV 499 Query: 472 NFLRSLLKSLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSICPD---- 524 + LKS + + L++ + K ++ L PD L S+ Sbjct: 500 SRETERLKSTWVNPRILAAAEAERVLGKAIDHEYNLFDLLRRPDVDYARLMSLDGGKYAS 559 Query: 525 -------ARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALS 577 S VIE+++I + YA Y RQ E + E+ +P + DY + ALS Sbjct: 560 GDVSRETLGALSEPVIEQVEIAAKYAGYIDRQKDEVQRAAHYEQLRLPPELDYMQVSALS 619 Query: 578 NELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 E+++KL +P L QAS+I G+TPAA++LLL+++KK K Sbjct: 620 IEVRQKLQKHRPETLGQASRISGVTPAAISLLLVHLKKGGFK 661 >gi|53721015|ref|YP_110001.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei K96243] gi|81170533|sp|Q63PG8|MNMG_BURPS RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|52211429|emb|CAH37420.1| glucose inhibited division protein A [Burkholderia pseudomallei K96243] Length = 657 Score = 806 bits (2082), Expect = 0.0, Method: Composition-based stats. Identities = 288/629 (45%), Positives = 390/629 (62%), Gaps = 15/629 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DA Sbjct: 6 EFDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D GIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q V Sbjct: 66 LGGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRVLYKQAIRRRLENQPNLWLFQQAV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + V Q R VVLT GTFL G IH+G GR GD + SL + Sbjct: 126 DDLMVEGDRVVGAVTQVGVRFRARAVVLTAGTFLDGKIHVGLNHYTGGRAGDPAAVSLSS 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITNRQ-IECGI 242 + + GRLKTGTP R+DG+TI + K ++Q D IP FSF+ + Q + C + Sbjct: 186 RLKELNLPQGRLKTGTPPRIDGRTIDFSKLDEQPGDLDPIPVFSFLGRAEQHPQQLPCWV 245 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T Sbjct: 246 THTNERTHDIIRSGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLTT 305 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + YPNGIST+LP ++Q + ++ GLE+ +I+RPGYAIEYDY +P+ L +LETK I G Sbjct: 306 NEFYPNGISTSLPFDVQLALVHSMRGLEQAHILRPGYAIEYDYFDPRALKSSLETKAIGG 365 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AGIN+ R + + D C R +Y+GV++DDL ++G+ E Sbjct: 366 LFFAGQINGTTGYEEAAAQGLLAGINAGRYAQEKDAWCPRRDQAYLGVLVDDLVTRGISE 425 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F + + L++ Sbjct: 426 PYRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDDVRWDAFNRKRDAVSRETERLRTTW 485 Query: 483 LTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----------CPDARKFS 529 +T K L +T++ K + E L P S + + + Sbjct: 486 VTPKTLPADEATALLGKPIDHEYSLAELLRRPGVSYDGVCGLRGGECGPSEPLAEDELLL 545 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 + + E+++I Y Y RQ E + E +P DY+ + LS E+ +KL+ +P Sbjct: 546 AQIKEQIEIGIKYQGYIERQAGEIERNGANENTRLPDGIDYTEVRGLSFEVSQKLNQFRP 605 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKKNTV 618 + QAS+I GMTPAA++LL++++KK + Sbjct: 606 ETIGQASRISGMTPAAISLLMVHLKKRGL 634 >gi|238787871|ref|ZP_04631668.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Yersinia frederiksenii ATCC 33641] gi|238724214|gb|EEQ15857.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Yersinia frederiksenii ATCC 33641] Length = 629 Score = 806 bits (2082), Expect = 0.0, Method: Composition-based stats. Identities = 293/619 (47%), Positives = 396/619 (63%), Gaps = 5/619 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA Sbjct: 6 QFDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLM D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 66 LGGLMAMATDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQPV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + V + R VVLT GTFL G IHIG GR GD PS SL Sbjct: 126 EDLIVENDHVVGAVTKMGLKFRAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPSISLSQ 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGIT 243 + RLKTGTP R+D +TI + + Q D + FSF+ + + Q+ C IT Sbjct: 186 RLRELPLRVNRLKTGTPPRIDARTIDFSQLAPQLGDTPIPVFSFLGNAEQHPEQMACHIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 246 YTNEKTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNSHQIFLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q Q +R++ GLE I+RPGYAIEYD+ +P++L PTLE+K I GL Sbjct: 306 EIYPNGISTSLPFDVQMQIVRSMKGLENARIVRPGYAIEYDFFDPRDLKPTLESKYIHGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+ R +N D R ++Y+GV++DDL++ G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGLNAGRFANDDDGWSPRRDEAYLGVLVDDLSTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT +G KLG + + R + F+K I++ R L+ + + Sbjct: 426 YRMFTSRAEYRLMLREDNADLRLTEMGRKLGLVDDVRWEHFSKKIEQIEKERQRLRDIWV 485 Query: 484 TSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIE 539 + + + I+ K E L P+ + L ++ ++++I+ Sbjct: 486 HPHSENVSEINALLKAPLSKEANGEELLRRPEIDYRLLTTLPSFGPALTDPQAADQVEIQ 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ E ++ E L+P D DYS + LSNE+ KL+ KP ++ QAS+I Sbjct: 546 VKYEGYIARQQEEIEKQLRNENTLLPTDLDYSQVSGLSNEVIAKLNDHKPNSIGQASRIS 605 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+TPAA+++LL+++KK + Sbjct: 606 GITPAAISILLVWLKKQGL 624 >gi|171315838|ref|ZP_02905069.1| glucose inhibited division protein A [Burkholderia ambifaria MEX-5] gi|171099027|gb|EDT43812.1| glucose inhibited division protein A [Burkholderia ambifaria MEX-5] Length = 656 Score = 806 bits (2082), Expect = 0.0, Method: Composition-based stats. Identities = 286/633 (45%), Positives = 385/633 (60%), Gaps = 15/633 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+ Sbjct: 2 LFPTEFDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DAL G M D +GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Sbjct: 62 EVDALGGAMAAATDESGIQFRILNSSKGPAVRATRAQADRILYKAAIRHRLENQSNLWLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + + V Q R VVLT GTFL G IH+G GR GD + Sbjct: 122 QQAVDDLMVEGDRVVGAVTQIGIRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAV 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITNRQ-I 238 SL + GRLKTGTP R+DG++I + K ++Q D IP FSF+ + Q + Sbjct: 182 SLSARLKELKLPQGRLKTGTPPRIDGRSIDFSKLDEQPGDLDPIPVFSFLGRAEQHPQQL 241 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C +T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPE Sbjct: 242 PCWVTHTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPE 301 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL T+ YPNGIST+LP ++Q + + ++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 302 GLTTNEFYPNGISTSLPFDVQLELVHSMRGLENAHILRPGYAIEYDYFDPRALKASLETK 361 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I+GLF AGQINGTTGYEEAAAQGL+AG+N+ R + D C R +Y+GV++DDL ++ Sbjct: 362 AINGLFFAGQINGTTGYEEAAAQGLLAGLNAGRYVQEKDAWCPRRDQAYLGVLVDDLVTR 421 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 GV EPYRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F++ + L Sbjct: 422 GVAEPYRMFTSRAEYRLSLREDNADMRLTEIGRELGLVDDARWDAFSRKRDAVSRETERL 481 Query: 479 KSLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNL----------FSICPDA 525 KS +T K L +T++ K + E L P + D Sbjct: 482 KSTWVTPKTLPPEEATALLGKAIDHEYSLAELLRRPGIGYDGVCGLKGGECAPAEPLADD 541 Query: 526 RKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 + E+++I Y Y RQ E + E +P DY + LS E+ +KL+ Sbjct: 542 PVLLEQIKEQVEIGIKYQGYIERQASEIERNDANENTRLPDGIDYREVRGLSFEVSQKLN 601 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYIKKNTV 618 +P + QAS+I G+TPAA++LL++++K+ + Sbjct: 602 EFRPETIGQASRISGVTPAAISLLMVHLKRRGL 634 >gi|254184036|ref|ZP_04890627.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei 1655] gi|184214568|gb|EDU11611.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei 1655] Length = 657 Score = 806 bits (2082), Expect = 0.0, Method: Composition-based stats. Identities = 289/629 (45%), Positives = 390/629 (62%), Gaps = 15/629 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DA Sbjct: 6 EFDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D GIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q V Sbjct: 66 LGGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRVLYKQAIRRRLENQPNLWLFQQAV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + V Q R VVLT GTFL G IH+G GR GD + SL + Sbjct: 126 DDLMVEGDRVVGAVTQVGVRFRARAVVLTAGTFLDGKIHVGLNHYTGGRAGDPAAVSLSS 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITNRQ-IECGI 242 + + GRLKTGTP R+DG+TI + K ++Q D IP FSF+ + Q + C + Sbjct: 186 RLKELNLPQGRLKTGTPPRIDGRTIDFSKLDEQPGDLDPIPVFSFLGRAEQHPQQLPCWV 245 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T Sbjct: 246 THTNERTHDIIRSGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLTT 305 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + YPNGIST+LP ++Q + ++ GLE+ +I+RPGYAIEYDY +P+ L +LETK I G Sbjct: 306 NEFYPNGISTSLPFDVQLALVHSMRGLEQAHILRPGYAIEYDYFDPRALKSSLETKAIGG 365 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AGIN+ R + + D C R +Y+GV++DDL ++GV E Sbjct: 366 LFFAGQINGTTGYEEAAAQGLLAGINAGRYAQEKDAWCPRRDQAYLGVLVDDLVTRGVSE 425 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F + + L++ Sbjct: 426 PYRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDDVRWDAFNRKRDAVSRETERLRTTW 485 Query: 483 LTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----------CPDARKFS 529 +T K L +T++ K + E L P S + + + Sbjct: 486 VTPKTLPADEATALLGKPIDHEYSLAELLRRPGVSYDGVCGLRGGECGPSEPLAEDELLL 545 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 + + E+++I Y Y RQ E + E +P DY+ + LS E+ +KL+ +P Sbjct: 546 AQIKEQIEIGIKYQGYIERQAGEIERNGANENTRLPDGIDYTEVRGLSFEVSQKLNQFRP 605 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKKNTV 618 + QAS+I GMTPAA++LL++++KK + Sbjct: 606 ETIGQASRISGMTPAAISLLMVHLKKRGL 634 >gi|134281604|ref|ZP_01768312.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei 305] gi|167904864|ref|ZP_02492069.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei NCTC 13177] gi|167913142|ref|ZP_02500233.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei 112] gi|134247271|gb|EBA47357.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei 305] Length = 657 Score = 806 bits (2082), Expect = 0.0, Method: Composition-based stats. Identities = 289/629 (45%), Positives = 390/629 (62%), Gaps = 15/629 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DA Sbjct: 6 EFDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D GIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q V Sbjct: 66 LGGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRVLYKQAIRRRLENQPNLWLFQQAV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + V Q R VVLT GTFL G IH+G GR GD + SL + Sbjct: 126 DDLMVEGDRVVGAVTQVGVRFRARAVVLTAGTFLDGKIHVGLNHYTGGRAGDPAAVSLSS 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITNRQ-IECGI 242 + + GRLKTGTP R+DG+TI + K ++Q D IP FSF+ + Q + C + Sbjct: 186 RLKELNLPQGRLKTGTPPRIDGRTIDFSKLDEQPGDLDPIPVFSFLGRAEQHPQQLPCWV 245 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T Sbjct: 246 THTNERTHDIIRSGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLTT 305 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + YPNGIST+LP ++Q + ++ GLE+ +I+RPGYAIEYDY +P+ L +LETK I G Sbjct: 306 NEFYPNGISTSLPFDVQLALVHSMRGLEQAHILRPGYAIEYDYFDPRALKSSLETKAIGG 365 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AGIN+ R + + D C R +Y+GV++DDL ++GV E Sbjct: 366 LFFAGQINGTTGYEEAAAQGLLAGINAGRYAQEKDAWCPRRDQAYLGVLVDDLVTRGVSE 425 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F + + L++ Sbjct: 426 PYRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDDVRWDAFNRKRDAVSRETERLRTTW 485 Query: 483 LTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----------CPDARKFS 529 +T K L +T++ K + E L P S + + + Sbjct: 486 VTPKTLPADEATALLGKPIDHEYSLAELLRRPGISYDGVCGLRGGECGPSEPLAEDELLL 545 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 + + E+++I Y Y RQ E + E +P DY+ + LS E+ +KL+ +P Sbjct: 546 AQIKEQIEIGIKYQGYIERQAGEIERNGANENTRLPDGIDYTEVRGLSFEVSQKLNQFRP 605 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKKNTV 618 + QAS+I GMTPAA++LL++++KK + Sbjct: 606 ETIGQASRISGMTPAAISLLMVHLKKRGL 634 >gi|170694309|ref|ZP_02885463.1| glucose inhibited division protein A [Burkholderia graminis C4D1M] gi|170140732|gb|EDT08906.1| glucose inhibited division protein A [Burkholderia graminis C4D1M] Length = 652 Score = 806 bits (2082), Expect = 0.0, Method: Composition-based stats. Identities = 285/631 (45%), Positives = 388/631 (61%), Gaps = 15/631 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + +DVIV+GGGHAG EAA +A++G T L+TH T+G MSCNP+IGG+GKGHLV+ Sbjct: 2 LFPTEFDVIVVGGGHAGTEAALASARMGNKTLLLTHNIETLGQMSCNPSIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DAL G M D GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Sbjct: 62 EVDALGGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRLLYKQAIRHRLENQPNLWLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + + V Q R VVLT GTFL G IH+G GR GD + Sbjct: 122 QQAVDDLMVEGDRVVGAVTQVGIRFRSRAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAV 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQI 238 SL + GRLKTGTP R+DG+TI + + E+Q D +P FSF+ + RQ+ Sbjct: 182 SLSARLKELKLPQGRLKTGTPPRIDGRTIDFSQLEEQPGDLDPVPVFSFLGRAEQHPRQV 241 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C +T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPE Sbjct: 242 PCWVTHTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPE 301 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL T+ YPNGIST+LP ++Q + +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 302 GLTTNEFYPNGISTSLPFDVQLELVRSMRGLEHAHILRPGYAIEYDYFDPRGLKASLETK 361 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 ISGLF AGQINGTTGYEEAAAQGL+AGIN+ D C R +Y+GV++DDL ++ Sbjct: 362 VISGLFFAGQINGTTGYEEAAAQGLLAGINAGLFVQGKDAWCPRRDQAYLGVLVDDLVTR 421 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 GV EPYRMFTSRAEYR+SLR DNAD RLT IG +LG + E R F++ + L Sbjct: 422 GVSEPYRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDEVRWDAFSRKRDAVSRETERL 481 Query: 479 KSLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----------CPDA 525 ++ + K L +T++ K + + L P S + ++ + Sbjct: 482 RTTWVNPKTLSADEATALLGKPIDHEYSLADLLRRPGVSYDGVCALRAGACAAPGTLAED 541 Query: 526 RKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 + + E+++I Y Y RQ E + + E +P+ DY+ + LS E ++KL+ Sbjct: 542 EVLLAQIKEQIEIGIKYQGYIDRQADEIERNEAHESTRLPEGLDYAEVRGLSFEARQKLT 601 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYIKKN 616 +P + QAS+I G+TPAA++LL++++K+ Sbjct: 602 QFRPETIGQASRISGITPAAISLLMVHLKRG 632 >gi|332163559|ref|YP_004300136.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318608066|emb|CBY29564.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Yersinia enterocolitica subsp. palearctica Y11] gi|325667789|gb|ADZ44433.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330861789|emb|CBX71962.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Yersinia enterocolitica W22703] Length = 629 Score = 806 bits (2082), Expect = 0.0, Method: Composition-based stats. Identities = 291/619 (47%), Positives = 393/619 (63%), Gaps = 5/619 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA Sbjct: 6 QFDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLM D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 66 LGGLMAMATDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQPV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + V + R VVLT GTFL G IHIG GR GD PS SL Sbjct: 126 EDLIVENDRVVGAVTKMGLKFRAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPSISLSQ 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGIT 243 + RLKTGTP R+D +TI + + Q D + FSF+ + + Q+ C IT Sbjct: 186 RLRELPLRVNRLKTGTPPRIDARTIDFSQLAPQLGDTPIPVFSFLGNASQHPEQMACHIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 246 YTNEKTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNSHQIFLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q Q +R++ GLE I+RPGYAIEYD+ +P++L PTLE+K I GL Sbjct: 306 EIYPNGISTSLPFDVQMQIVRSMKGLENARIVRPGYAIEYDFFDPRDLKPTLESKYIQGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+ R +N D R ++Y+GV++DDL++ G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGLNAGRFANDEDGWSPRRDEAYLGVLVDDLSTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT +G KLG + + R F++ I++ R L+ + + Sbjct: 426 YRMFTSRAEYRLMLREDNADLRLTEMGRKLGLVDDARWAHFSQKIEQIEKERQRLRDIWV 485 Query: 484 TSKNLSSTSISF---KQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIE 539 + + I+ K E L P+ + L ++ ++++I+ Sbjct: 486 HPHSENVAEINAVLKAPLSKEANGEELLRRPEIDYRLLTTLPSFGPALTDPQAADQVEIQ 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ E ++ E L+P D DY + LSNE+ KL+ KP ++ QAS+I Sbjct: 546 VKYEGYITRQQEEIEKQLRNENTLLPADLDYHQVSGLSNEVIAKLNDHKPNSIGQASRIS 605 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+TPAA+++LL+++KK + Sbjct: 606 GITPAAISILLVWLKKQGL 624 >gi|123444382|ref|YP_001008347.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Yersinia enterocolitica subsp. enterocolitica 8081] gi|166224338|sp|A1JTD9|MNMG_YERE8 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|122091343|emb|CAL14229.1| glucose inhibited division protein A [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 629 Score = 806 bits (2081), Expect = 0.0, Method: Composition-based stats. Identities = 291/619 (47%), Positives = 393/619 (63%), Gaps = 5/619 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA Sbjct: 6 QFDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLM D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 66 LGGLMAMATDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQPV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + V + R VVLT GTFL G IHIG GR GD PS SL Sbjct: 126 EDLIVENDRVVGAVTKMGLKFRAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPSISLSQ 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGIT 243 + RLKTGTP R+D +TI + + Q D + FSF+ + + Q+ C IT Sbjct: 186 RLRELPLRVNRLKTGTPPRIDARTIDFSQLAPQLGDTPIPVFSFLGNASQHPEQMACHIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 246 YTNEKTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNSHQIFLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q Q +R++ GLE I+RPGYAIEYD+ +P++L PTLE+K I GL Sbjct: 306 EIYPNGISTSLPFDVQMQIVRSMKGLENARIVRPGYAIEYDFFDPRDLKPTLESKYIQGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+ R +N D R ++Y+GV++DDL++ G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGLNAGRFANDEDGWSPRRDEAYLGVLVDDLSTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT +G KLG + + R F++ I++ R L+ + + Sbjct: 426 YRMFTSRAEYRLMLREDNADLRLTEMGRKLGLVDDARWAHFSQKIEQIEKERQRLRDIWV 485 Query: 484 TSKNLSSTSISF---KQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIE 539 + + I+ K E L P+ + L ++ ++++I+ Sbjct: 486 HPHSENVAEINAVLKAPLSKEANGEELLRRPEIDYRLLTTLPSFGPALTDPQAADQVEIQ 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ E ++ E L+P D DY + LSNE+ KL+ KP ++ QAS+I Sbjct: 546 VKYEGYIARQQEEIEKQLRNENTLLPADLDYRQVSGLSNEVIAKLNDHKPNSIGQASRIS 605 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+TPAA+++LL+++KK + Sbjct: 606 GITPAAISILLVWLKKQGL 624 >gi|254360965|ref|ZP_04977111.1| glucose inhibited cell division protein A [Mannheimia haemolytica PHL213] gi|153092444|gb|EDN73507.1| glucose inhibited cell division protein A [Mannheimia haemolytica PHL213] Length = 630 Score = 806 bits (2081), Expect = 0.0, Method: Composition-based stats. Identities = 300/623 (48%), Positives = 390/623 (62%), Gaps = 5/623 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + N+ YDVIV+GGGHAG EAA A++G T ++TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 IYNQIYDVIVVGGGHAGTEAALAPARMGLKTLILTHNVDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDA+ GLM + D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Sbjct: 62 EIDAMGGLMAKATDVAGIQFRTLNNSKGPAVRATRAQADRVLYRNAVRTALENQPNLDIF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q EV E N V + + VVLT GTFL G IHIG GR GD + Sbjct: 122 QQEVVDILVENNRAVGAVTKMGLTFKARAVVLTAGTFLAGKIHIGLDNYAGGRAGDPAAT 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 L + + RLKTGTP RLD +TI +D KQ DE L FSFM D + RQI Sbjct: 182 MLADRLRDLNLRVDRLKTGTPPRLDARTINFDVLAKQHGDEVLPVFSFMGDVSQHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I ++ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEG Sbjct: 242 CYITHTNDQTHDLIRNSLDRSPMYTGIIEGVGPRYCPSIEDKVMRFADRNSHQIYLEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 LNT VYPNGIST+LP ++Q + ++ GLE II+PGYAIEYDY +P++L PTLETK Sbjct: 302 LNTIEVYPNGISTSLPFDVQMGIVNSMKGLENTRIIKPGYAIEYDYFDPRDLKPTLETKA 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEA AQGL+AGIN+A + + +R +Y GV++DDL + G Sbjct: 362 IDGLFFAGQINGTTGYEEAGAQGLLAGINAALQVQGKEAWYPTRDQAYTGVLVDDLCTLG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYR+FTSRAEYR+ LR DNAD RLTP +LG I E R RF + ++ R+ LK Sbjct: 422 TKEPYRVFTSRAEYRLLLREDNADIRLTPKAHELGLIDEARWVRFNQKMEAIEQERARLK 481 Query: 480 SLVLT---SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIER 535 S ++ + + + + P+ S + L I A V E+ Sbjct: 482 STWAHLQMPNLDELNALLANPLAREASGEDLIRRPEMSYEKLTQIALFAPAIEDKQVAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I Y Y Q E + K E LIP +FDY + +LSNE++ KL +P ++ QA Sbjct: 542 VEIAIKYQGYIEHQYNEIERHKRHENTLIPVEFDYDKVESLSNEVRAKLMQHRPVSIGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV 618 S+I G+TPAA+++LL+ +KK + Sbjct: 602 SRISGITPAAISILLVNLKKQGM 624 >gi|260771038|ref|ZP_05879966.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio furnissii CIP 102972] gi|260613927|gb|EEX39118.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio furnissii CIP 102972] gi|315178650|gb|ADT85564.1| glucose inhibited division protein A [Vibrio furnissii NCTC 11218] Length = 631 Score = 806 bits (2081), Expect = 0.0, Method: Composition-based stats. Identities = 286/630 (45%), Positives = 388/630 (61%), Gaps = 6/630 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA AA+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHETFDVIVVGGGHAGTEAALAAARTGQRTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAEAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRHTLENTPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q E + + +V Q R VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQAADDLIVENDQVRGVVTQMGLKFRAKAVVLTVGTFLGGKIHIGLENFSGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + F RLKTGTP R+D ++ + E Q D FSFM + + RQI Sbjct: 182 ALAQRLRELPFRVDRLKTGTPPRIDANSVDFSILEAQHGDNPTPVFSFMGKREHHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CFITHTNEKTHDVIRANLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTTELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTFETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 IQGLFFAGQINGTTGYEEAAAQGLMAGLNASLFSQDKEGWSPRRDQAYVGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG I + R RF + I+ R LK Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLINDARWARFNQKIEHMETERQRLK 481 Query: 480 SLVLTSKN--LSSTSISFKQD-GKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIER 535 + + + + + K + + + L P+ + L S+ A E+ Sbjct: 482 ETWMNPNSDGVDALNALLKTPMSREASGEDLLRRPEMTYDLLTSLSAFAPALEDREAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y RQ E ++ E +P D DY ++ LSNE+ KL+ KP ++ A Sbjct: 542 VEIQVKYDGYIQRQQDEIEKSLRHEHTKLPIDLDYKAVKGLSNEVVMKLNNAKPESIGIA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNT-VKLNEIV 624 S+I G+TPAA+++LL+++KK+ +K E Sbjct: 602 SRISGITPAAISILLVHLKKHGLLKKGEAA 631 >gi|240950029|ref|ZP_04754337.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Actinobacillus minor NM305] gi|240295507|gb|EER46250.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Actinobacillus minor NM305] Length = 630 Score = 806 bits (2081), Expect = 0.0, Method: Composition-based stats. Identities = 294/623 (47%), Positives = 388/623 (62%), Gaps = 5/623 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + N++YDVIV+GGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 IYNKTYDVIVVGGGHAGTEAALAPARMGLKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDA+ GLM D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Sbjct: 62 EIDAMGGLMATATDKAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q EV E N V + + V+LT GTFL G IHIG GR GD + Sbjct: 122 QQEVVDILVENNRAVGAVTKMGLTFKAKAVILTAGTFLAGKIHIGLDNYAGGRAGDPAAT 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIE 239 L + + RLKTGTP RLD +TI +D KQ DE L SFM + RQI Sbjct: 182 MLADRLRDLNLRVDRLKTGTPPRLDARTINFDVLAKQHGDEVLPVMSFMGSVEQHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I ++ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEG Sbjct: 242 CYITHTNEQTHDLIRNSLDRSPMYTGIIEGIGPRYCPSIEDKVMRFSDRNSHQIYLEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T VYPNGIST+LP ++Q + ++ GLE II+PGYAIEYDY +P++L PTLETK Sbjct: 302 LTTIEVYPNGISTSLPFDVQMGIVNSMKGLENTRIIKPGYAIEYDYFDPRDLKPTLETKA 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AGIN+ + D +R +Y GV++DDL + G Sbjct: 362 IDGLFFAGQINGTTGYEEAAAQGLLAGINAGLQVQGKDAWFPTRDLAYTGVLVDDLCTLG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYR+FTSRAEYR+ LR DNAD RLTPI + G I E R RF + ++ ++ LK Sbjct: 422 TKEPYRVFTSRAEYRLLLREDNADARLTPIAHQFGLIDEARWARFNEKMENIEKEKARLK 481 Query: 480 SLVLTSKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIER 535 + + ++ + + + + + P+ + + L I P A E+ Sbjct: 482 QTWAHLQMANLAEVNALLNSPLAREASGEDLIRRPEVTYEALTQIAPFAPAIEDKEAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I Y Y Q E + K E IP +FDY + +LSNE++ KL +P ++ QA Sbjct: 542 VEISIKYQGYIEHQQQEIERHKRHENTQIPAEFDYDKVESLSNEVRAKLMQHRPVSIGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV 618 S+I G+TPAA+++LL+ +KK + Sbjct: 602 SRISGITPAAISILLVNLKKQGM 624 >gi|165977091|ref|YP_001652684.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|205831485|sp|B0BRY1|MNMG_ACTPJ RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|165877192|gb|ABY70240.1| glucose inhibited division protein A [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 630 Score = 806 bits (2081), Expect = 0.0, Method: Composition-based stats. Identities = 295/623 (47%), Positives = 388/623 (62%), Gaps = 5/623 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + YDVIV+GGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 IYHEIYDVIVVGGGHAGTEAALAPARMGLKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDA+ GLM D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Sbjct: 62 EIDAMGGLMAIAIDQAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q EV E N V + + +VVLT GTFL G IHIG GR GD + Sbjct: 122 QQEVVDILVENNRAVGAVTKMGLTFKARSVVLTAGTFLAGKIHIGLDNYAGGRAGDPSAT 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIE 239 L + + RLKTGTP RLD +TI +D KQ D L SFM + RQI Sbjct: 182 MLADRLRDLNLRVDRLKTGTPPRLDARTINFDVLAKQHGDAELPVMSFMGAVDLHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I ++ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEG Sbjct: 242 CYITHTNEQTHDLIRNSLDRSPMYTGVIEGSGPRYCPSIEDKVMRFSDRNSHQIYLEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L+T VYPNGIST+LP ++Q + ++ GLEK II+PGYAIEYDY +P++L PTLETK Sbjct: 302 LSTIEVYPNGISTSLPFDVQMGIVNSMKGLEKTRIIKPGYAIEYDYFDPRDLKPTLETKA 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AGIN+A + + +R +Y GV++DDL + G Sbjct: 362 IEGLFFAGQINGTTGYEEAAAQGLLAGINAALQVQGKEAWFPTRDLAYTGVLVDDLCTLG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYR+FTSRAEYR+ LR DNAD RLTPI +LG I + R RF + ++ R LK Sbjct: 422 TKEPYRVFTSRAEYRLLLREDNADIRLTPIAHELGLIDDARWARFNQKMENIERERERLK 481 Query: 480 SLVLTSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIER 535 + + ++ + + + + L P+ + L + A E+ Sbjct: 482 QIWIHPQSEHLAVVNELVNSPLTREASGEDLLRRPEVTYDKLTQVAAFAPALDDKQAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I Y Y Q E + K E LIP +FDY + +LSNE++ KL +P ++ QA Sbjct: 542 VEISIKYQGYIEHQQNEIERHKRHENTLIPAEFDYDKVESLSNEVRAKLMQHRPVSIGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV 618 S+I G+TPAA+++LL+ +KK + Sbjct: 602 SRISGITPAAISILLVNLKKQGM 624 >gi|303252046|ref|ZP_07338216.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307248704|ref|ZP_07530717.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|302649110|gb|EFL79296.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306854631|gb|EFM86821.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 630 Score = 806 bits (2081), Expect = 0.0, Method: Composition-based stats. Identities = 294/623 (47%), Positives = 389/623 (62%), Gaps = 5/623 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + YDVIV+GGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 IYHEIYDVIVVGGGHAGTEAALAPARMGLKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDA+ GLM D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Sbjct: 62 EIDAMGGLMAIAIDQAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q EV E N + + + +VVLT GTFL G IHIG GR GD + Sbjct: 122 QQEVVDILVENNRAVGAITKMGLTFKARSVVLTAGTFLAGKIHIGLDNYAGGRAGDPAAT 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIE 239 L + + RLKTGTP RLD +TI +D KQ D L SFM + RQI Sbjct: 182 MLADRLRDLNLRVDRLKTGTPPRLDARTINFDVLAKQHGDAELPVMSFMGSVDLHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I ++ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEG Sbjct: 242 CYITHTNEQTHDLIRNSLDRSPMYTGIIEGIGPRYCPSIEDKVMRFSDRNSHQIYLEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L+T VYPNGIST+LP ++Q + ++ GLEK II+PGYAIEYDY +P++L PTLETK Sbjct: 302 LSTIEVYPNGISTSLPFDVQMGIVNSMKGLEKTRIIKPGYAIEYDYFDPRDLKPTLETKA 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AGIN+A + + +R +Y GV++DDL + G Sbjct: 362 IEGLFFAGQINGTTGYEEAAAQGLLAGINAALQVQGKEAWFPTRDLAYTGVLVDDLCTLG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYR+FTSRAEYR+ LR DNAD RLTPI +LG I + R RF + ++ R LK Sbjct: 422 TKEPYRVFTSRAEYRLLLREDNADIRLTPIAHELGLIDDARWARFNQKMENIERERERLK 481 Query: 480 SLVLTSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIER 535 + + ++ + + + + L P+ + L + A E+ Sbjct: 482 QIWIHPQSEHLAVVNELVNSPLTREASGEDLLRRPEVTYDKLTQVAAFAPALDDKQAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I Y Y Q E + K E LIP +FDY ++ +LSNE++ KL +P ++ QA Sbjct: 542 VEISIKYQGYIEHQQNEIERHKRHENTLIPAEFDYDNVESLSNEVRAKLMQHRPVSIGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV 618 S+I G+TPAA+++LL+ +KK + Sbjct: 602 SRISGITPAAISILLVNLKKQGM 624 >gi|293393679|ref|ZP_06637988.1| glucose-inhibited division protein A [Serratia odorifera DSM 4582] gi|291423801|gb|EFE97021.1| glucose-inhibited division protein A [Serratia odorifera DSM 4582] Length = 629 Score = 806 bits (2081), Expect = 0.0, Method: Composition-based stats. Identities = 288/619 (46%), Positives = 390/619 (63%), Gaps = 5/619 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA Sbjct: 6 QFDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLM D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 66 LGGLMATAIDHAGIQFRILNASKGPAVRATRAQADRVLYRQAVRSALENQPNLTLFQQPV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + V Q R VVLT GTFL G IHIG GR GD PS SL Sbjct: 126 EDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPSISLSQ 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGIT 243 + RLKTGTP R+D +TI + +Q D + FSFM + + Q + C IT Sbjct: 186 RLRELPLRVNRLKTGTPPRIDARTIDFSVLAEQHGDTPMPVFSFMGNASQHPQQVPCYIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 246 HTNEKTHDVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNGIST+LP ++Q Q +R++ G++ I+RPGYAIEYD+ +P++L PTLE+K I GL Sbjct: 306 EVYPNGISTSLPFDVQMQIVRSMEGMQNARIVRPGYAIEYDFFDPRDLKPTLESKFIQGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+ R + + R +Y+GV++DDL++ G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGLNAGRYAVDDEGWSPRRDQAYLGVLVDDLSTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT G +LG + + R R+++ ++ R L+ + + Sbjct: 426 YRMFTSRAEYRLMLREDNADLRLTEKGRELGLVDDVRWARYSEKLELIERERQRLRDVWV 485 Query: 484 TSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIE 539 + S+ + E L P+ L ++ A + E+++I+ Sbjct: 486 HPHSDNVAQVNSLLKAPLSREANGEELLRRPEMDYAQLTAVDAFAPPLTDTQAAEQVEIQ 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ E + + E ++P D DY + LSNE+ KL+ KP ++ QAS+I Sbjct: 546 VKYEGYIARQQDEIDKQQRNENTVLPLDLDYRQVSGLSNEVIAKLNDHKPNSIGQASRIS 605 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+TPAA+++LL+++KK + Sbjct: 606 GITPAAISILLVWLKKQGL 624 >gi|307257737|ref|ZP_07539494.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306863643|gb|EFM95569.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 630 Score = 806 bits (2081), Expect = 0.0, Method: Composition-based stats. Identities = 294/623 (47%), Positives = 387/623 (62%), Gaps = 5/623 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + YDVIV+GGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 IYHEIYDVIVVGGGHAGTEAALAPARMGLKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDA+ GLM D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Sbjct: 62 EIDAMGGLMAIAIDQAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q EV E N V + + +VVLT GTFL G IHIG GR GD + Sbjct: 122 QQEVVDILVENNRAVGAVTKMGLTFKARSVVLTAGTFLAGKIHIGLDNYAGGRAGDPAAT 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIE 239 L + + RLKTGTP RLD +TI +D KQ D L SFM + RQI Sbjct: 182 MLADRLRDLNLRIDRLKTGTPPRLDARTINFDVLAKQHGDAELPVMSFMGSVDLHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I ++ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEG Sbjct: 242 CYITHTNEQTHDLIRNSLDRSPMYTGVIEGIGPRYCPSIEDKVMRFSDRNSHQIYLEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L+T VYPNGIST+LP ++Q + ++ GLEK II+PGYAIEYDY +P++L PTLETK Sbjct: 302 LSTIEVYPNGISTSLPFDVQMGIVNSMKGLEKTRIIKPGYAIEYDYFDPRDLKPTLETKA 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AGIN+A + + +R +Y GV++DDL + G Sbjct: 362 IEGLFFAGQINGTTGYEEAAAQGLLAGINAALQVQGKEAWFPTRDLAYTGVLVDDLCTLG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYR+FTSRAEYR+ LR DNAD RLTPI +LG I + R RF + ++ LK Sbjct: 422 TKEPYRVFTSRAEYRLLLREDNADIRLTPIAHELGLIDDARWARFNQKMENIEREHERLK 481 Query: 480 SLVLTSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIER 535 + + ++ + + + + L P+ + L + A E+ Sbjct: 482 QIWIHPQSEHLAVVNELVNSPLTREASGEDLLRRPEVTYDKLTQVAAFAPALDDKQAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I Y Y Q E + K E LIP +FDY + +LSNE++ KL +P ++ QA Sbjct: 542 VEISIKYQGYIEHQQNEIERHKRHENTLIPAEFDYDKVESLSNEVRAKLMQHRPVSIGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV 618 S+I G+TPAA+++LL+ +KK + Sbjct: 602 SRISGITPAAISILLVNLKKQGM 624 >gi|76809663|ref|YP_331606.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei 1710b] gi|167818023|ref|ZP_02449703.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei 91] gi|167896462|ref|ZP_02483864.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei 7894] gi|167921079|ref|ZP_02508170.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei BCC215] gi|254259137|ref|ZP_04950191.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei 1710a] gi|123600829|sp|Q3JXU7|MNMG_BURP1 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|76579116|gb|ABA48591.1| glucose-inhibited division protein A [Burkholderia pseudomallei 1710b] gi|254217826|gb|EET07210.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei 1710a] Length = 657 Score = 806 bits (2081), Expect = 0.0, Method: Composition-based stats. Identities = 288/629 (45%), Positives = 390/629 (62%), Gaps = 15/629 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DA Sbjct: 6 EFDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D GIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q V Sbjct: 66 LGGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRVLYKQAIRRRLENQPNLWLFQQAV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + V Q R VVLT GTFL G IH+G GR GD + SL + Sbjct: 126 DDLMVEGDRVVGAVTQVGVRFRARAVVLTAGTFLDGKIHVGLNHYTGGRAGDPAAVSLSS 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITNRQ-IECGI 242 + + GRLKTGTP R+DG+TI + K ++Q D IP FSF+ + Q + C + Sbjct: 186 RLKELNLPQGRLKTGTPPRIDGRTIDFSKLDEQPGDLDPIPVFSFLGRAEQHPQQLPCWV 245 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T Sbjct: 246 THTNERTHDIIRSGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLTT 305 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + YPNGIST+LP ++Q + ++ GLE+ +I+RPGYAIEYDY +P+ L +LETK I G Sbjct: 306 NEFYPNGISTSLPFDVQLALVHSMRGLEQAHILRPGYAIEYDYFDPRALKSSLETKAIGG 365 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AGIN+ R + + D C R +Y+GV++DDL ++GV E Sbjct: 366 LFFAGQINGTTGYEEAAAQGLLAGINAGRYAQEKDAWCPRRDQAYLGVLVDDLVTRGVSE 425 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+SLR DNAD RLT +G +LG + + R F + + L++ Sbjct: 426 PYRMFTSRAEYRLSLREDNADMRLTEVGRELGVVDDVRWDAFNRKRDAVSRETERLRTTW 485 Query: 483 LTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----------CPDARKFS 529 +T K L +T++ K + E L P S + + + Sbjct: 486 VTPKTLPADEATALLGKPIDHEYSLAELLRRPGVSYDGVCGLRGGECGPSEPLAEDELLL 545 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 + + E+++I Y Y RQ E + E +P DY+ + LS E+ +KL+ +P Sbjct: 546 AQIKEQIEIGIKYQGYIERQAGEIERNGANENTRLPDGIDYTEVRGLSFEVSQKLNQFRP 605 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKKNTV 618 + QAS+I GMTPAA++LL++++KK + Sbjct: 606 ETIGQASRISGMTPAAISLLMVHLKKRGL 634 >gi|307246580|ref|ZP_07528651.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306852452|gb|EFM84686.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 630 Score = 805 bits (2080), Expect = 0.0, Method: Composition-based stats. Identities = 295/623 (47%), Positives = 387/623 (62%), Gaps = 5/623 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + YDVIV+GGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 IYHEIYDVIVVGGGHAGTEAALAPARMGLKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDA+ GLM D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD Sbjct: 62 EIDAMGGLMAIAIDQAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDTF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q EV E N V + + +VVLT GTFL G IHIG GR GD + Sbjct: 122 QQEVVDILVENNRAVGAVTKMGLTFKARSVVLTAGTFLAGKIHIGLDNYAGGRAGDPAAT 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIE 239 L + + RLKTGTP RLD +TI +D KQ D L SFM + RQI Sbjct: 182 MLADRLRDLNLRVDRLKTGTPPRLDARTINFDVLAKQHGDAELPVMSFMGSVDLHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I ++ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEG Sbjct: 242 CYITHTNEQTHDLIRNSLDRSPMYTGVIEGIGPRYCPSIEDKVMRFSDRNSHQIYLEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L+T VYPNGIST+LP ++Q + ++ GLEK II+PGYAIEYDY +P++L PTLETK Sbjct: 302 LSTIEVYPNGISTSLPFDVQMGIVNSMKGLEKTRIIKPGYAIEYDYFDPRDLKPTLETKA 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AGIN+A + + +R +Y GV++DDL + G Sbjct: 362 IEGLFFAGQINGTTGYEEAAAQGLLAGINAALQVQGKEAWFPTRDLAYTGVLVDDLCTLG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYR+FTSRAEYR+ LR DNAD RLTPI +LG I + R RF + ++ R LK Sbjct: 422 TKEPYRVFTSRAEYRLLLREDNADIRLTPIAHELGLIDDARWARFNQKMENIERERERLK 481 Query: 480 SLVLTSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIER 535 + + ++ + + + + L P+ + L + A E+ Sbjct: 482 QIWIHPQSEHLAVVNELVNSPLTREASGEDLLRRPEVTYDKLTQVAAFAPALDDKQAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I Y Y Q E + K E LIP +FDY + +LSNE++ KL +P ++ QA Sbjct: 542 VEISIKYQGYIEHQQNEIERHKRHENTLIPAEFDYDKVESLSNEVRAKLMQHRPVSIGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV 618 S+I G+TPAA+++LL+ +KK + Sbjct: 602 SRISGITPAAISILLVNLKKQGM 624 >gi|307262144|ref|ZP_07543795.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306868121|gb|EFM99946.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 630 Score = 805 bits (2080), Expect = 0.0, Method: Composition-based stats. Identities = 294/623 (47%), Positives = 387/623 (62%), Gaps = 5/623 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + YDVIV+GGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 IYHEIYDVIVVGGGHAGTEAALAPARMGLKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDA+ GLM D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Sbjct: 62 EIDAMGGLMAIAIDQAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q EV E N V + + +VVLT GTFL G IHIG GR GD + Sbjct: 122 QQEVVDILVENNRAVGAVTKMGLTFKARSVVLTAGTFLAGKIHIGLDNYAGGRAGDPAAT 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIE 239 L + + RLKTGTP RLD +TI +D KQ D L SFM + RQI Sbjct: 182 MLADRLRDLNLRVDRLKTGTPPRLDARTINFDVLAKQHGDAELPVMSFMGSVDLHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I ++ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEG Sbjct: 242 CYITHTNEQTHDLIRNSLDRSPMYTGIIEGIGPRYCPSIEDKVMRFSDRNSHQIYLEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L+T VYPNGIST+LP ++Q + ++ GLEK II+PGYAIEYDY +P++L PTLETK Sbjct: 302 LSTIEVYPNGISTSLPFDVQMGIVNSMKGLEKTRIIKPGYAIEYDYFDPRDLKPTLETKA 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AGIN+A + + +R +Y GV++DDL + G Sbjct: 362 IEGLFFAGQINGTTGYEEAAAQGLLAGINAALQVQGKEAWFPTRDLAYTGVLVDDLCTLG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYR+FTSRAEYR+ LR DNAD RLTPI +LG I + R RF + ++ LK Sbjct: 422 TKEPYRVFTSRAEYRLLLREDNADIRLTPIAHELGLIDDARWARFNQKMENIEREHERLK 481 Query: 480 SLVLTSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIER 535 + + ++ + + + + L P+ + L + A E+ Sbjct: 482 QIWIHPQSEHLAVVNELVNSPLTREASGEDLLRRPEVTYDKLTQVAAFAPALDDKQAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I Y Y Q E + K E LIP +FDY + +LSNE++ KL +P ++ QA Sbjct: 542 VEISIKYQGYIEHQQNEIERHKRHENTLIPAEFDYDKVESLSNEVRAKLMQHRPVSIGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV 618 S+I G+TPAA+++LL+ +KK + Sbjct: 602 SRISGITPAAISILLVNLKKQGM 624 >gi|52082647|ref|YP_081438.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus licheniformis ATCC 14580] gi|52788046|ref|YP_093875.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus licheniformis ATCC 14580] gi|319648513|ref|ZP_08002729.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus sp. BT1B_CT2] gi|81170519|sp|Q65CN2|MNMG_BACLD RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|52005858|gb|AAU25800.1| glucose-inhibited division protein [Bacillus licheniformis ATCC 14580] gi|52350548|gb|AAU43182.1| GidA [Bacillus licheniformis ATCC 14580] gi|317389592|gb|EFV70403.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Bacillus sp. BT1B_CT2] Length = 628 Score = 805 bits (2080), Expect = 0.0, Method: Composition-based stats. Identities = 270/617 (43%), Positives = 387/617 (62%), Gaps = 3/617 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDV+V+G GHAG EAA +A+ GA T ++T + M CNP++GG KG +VREIDA Sbjct: 7 QYDVVVVGAGHAGVEAALASARQGAKTLVLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M + D IQ R+LN KGPAVR R QAD+ Y+ M++ + ++ NL ++QG V Sbjct: 67 LGGEMAKNIDKTHIQMRLLNTGKGPAVRALRAQADKFQYQHEMKKTLENEPNLTMLQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ Q + R TVVLTTGTFLRG I +G L +G PS L Sbjct: 127 ERLLIEDGECRGVITQTGAEYRSKTVVLTTGTFLRGKIILGDLSYSSGPNNQQPSIKLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ +I + KTE Q DE FS+ T + Q+ C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSHSIDYSKTEIQPGDEVPRAFSYETVEYITDQLPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETH II N+ S +YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSPETHEIIDNNLHRSPMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q + + TIPGLE V ++R GYAIEYD I P +L+PTLETKKI GLF Sbjct: 307 VYVQGLSTSLPEDVQRKMLSTIPGLENVQMMRAGYAIEYDAIVPTQLWPTLETKKIPGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QG++AGIN+ RK+ + + SR+D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGIMAGINAGRKALGKEEVILSRSDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT IG ++G I E R ++F + + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEIGYQIGLISEERYQKFQEKKAAIEAEKKRLHSVIIK 486 Query: 485 SKNLSST---SISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 + S+ + A + + P+ + + + ++ P +K + V E+++I+ Sbjct: 487 PTKENQEYIRSLGGSELKDGIRATDLMKRPEMNYETVTALAPPEQKVAGDVAEQVEIQIK 546 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y + + + +++K E + IP DY ++ ++ E ++KL ++P ++ QAS+I G+ Sbjct: 547 YEGYIEKSLQQVEKLKKMENKKIPDRIDYDAIKGIATEARQKLKEVRPLSVAQASRISGV 606 Query: 602 TPAALNLLLIYIKKNTV 618 PA +++LL+Y+++ + Sbjct: 607 NPADISILLVYLEQGRI 623 >gi|167740808|ref|ZP_02413582.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei 14] Length = 657 Score = 805 bits (2080), Expect = 0.0, Method: Composition-based stats. Identities = 288/629 (45%), Positives = 390/629 (62%), Gaps = 15/629 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DA Sbjct: 6 EFDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D GIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q V Sbjct: 66 LGGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRVLYKQAIRRRLENQPNLWLFQQAV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + V Q R VVLT GTFL G IH+G GR GD + SL + Sbjct: 126 DDLMVEGDRVVGAVTQVGVRFRARAVVLTAGTFLDGKIHVGLNHYTGGRAGDPAAVSLSS 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITNRQ-IECGI 242 + + GRLKTGTP R+DG+TI + K ++Q D IP FSF+ + Q + C + Sbjct: 186 RLKELNLPQGRLKTGTPPRIDGRTIDFSKLDEQPGDLDPIPVFSFLGRAEQHPQQLPCWV 245 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T Sbjct: 246 THTNERTHDIIRSGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLTT 305 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + YPNGIST+LP ++Q + ++ GLE+ +I+RPGYAIEYDY +P+ L +LE+K I G Sbjct: 306 NEFYPNGISTSLPFDVQLALVHSMRGLEQAHILRPGYAIEYDYFDPRALKSSLESKAIGG 365 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AGIN+ R + + D C R +Y+GV++DDL ++GV E Sbjct: 366 LFFAGQINGTTGYEEAAAQGLLAGINAGRYAQEKDAWCPRRDQAYLGVLVDDLVTRGVSE 425 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F + + L++ Sbjct: 426 PYRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDDVRWDAFNRKRDAVSRETERLRTTW 485 Query: 483 LTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----------CPDARKFS 529 +T K L +T++ K + E L P S + + + Sbjct: 486 VTPKTLPADEATALLGKPIDHEYSLAELLRRPGVSYDGVCGLRGGECGPSEPLAEDELLL 545 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 + + E+++I Y Y RQ E + E +P DY+ + LS E+ +KL+ +P Sbjct: 546 AQIKEQIEIGIKYQGYIERQAGEIERNGANENTRLPDGIDYTEVRGLSFEVSQKLNQFRP 605 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKKNTV 618 + QAS+I GMTPAA++LL++++KK + Sbjct: 606 ETIGQASRISGMTPAAISLLMVHLKKRGL 634 >gi|319760786|ref|YP_004124723.1| glucose inhibited division protein a [Alicycliphilus denitrificans BC] gi|317115347|gb|ADU97835.1| glucose inhibited division protein A [Alicycliphilus denitrificans BC] Length = 659 Score = 805 bits (2079), Expect = 0.0, Method: Composition-based stats. Identities = 291/642 (45%), Positives = 389/642 (60%), Gaps = 23/642 (3%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + +DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNP+IGG+GKGHLV+ Sbjct: 2 LYPQEFDVIVVGGGHAGTEAALAAARMGCRTLLLTHNIETLGQMSCNPSIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DAL G M D GIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Sbjct: 62 EVDALGGAMALATDEGGIQFRILNSSKGPAVRATRAQADRILYKAAIRRMLENQPNLWLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + ++ V Q R VVLT GTFL G IH+G AGR GD P+ Sbjct: 122 QQAVDDLMVEGDRVAGAVTQIGLRFRARAVVLTAGTFLDGRIHVGLNNYAAGRAGDPPAV 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERL--------IPFSFM-TD 231 SL + GRLKTGTP R+DG++I + + E+Q D FSFM + Sbjct: 182 SLSARLKELKLPQGRLKTGTPPRIDGRSIDFSQCEEQPGDGMPGGVNEGVLPVFSFMGST 241 Query: 232 KITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGH 291 + RQ+ C IT TN TH II S +++G I+ GPRYCPS+EDKI RF ++ H Sbjct: 242 VMHPRQVPCWITHTNARTHEIIRSGFDRSPMFTGKIEGVGPRYCPSVEDKINRFADKESH 301 Query: 292 QIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKEL 351 QIFLEPEGL T YPNGIST+LP +IQ+ +R++ GLE +I+RPGYAIEYDY +P+ L Sbjct: 302 QIFLEPEGLTTHEFYPNGISTSLPFDIQYALVRSMRGLENAHILRPGYAIEYDYFDPRSL 361 Query: 352 FPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 + ET++I GLF AGQINGTTGYEEAAAQGL AG+N+A + R ++Y+GV+ Sbjct: 362 KSSFETRQIQGLFFAGQINGTTGYEEAAAQGLFAGLNAALQCRGEAPWLPRRDEAYLGVL 421 Query: 412 IDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEY 471 +DDL +KGV EPYRMFTSRAE+R+ LR DNAD RLT G ++G + + R FA Sbjct: 422 VDDLVTKGVTEPYRMFTSRAEFRLQLREDNADMRLTEAGRRMGLVDDARWDAFAAKRDAV 481 Query: 472 NFLRSLLKSLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSICPD---- 524 + LKS + + L++ + K ++ L PD L S+ Sbjct: 482 SRETERLKSTWVNPRILAAAEAERVLGKAIDHEYNLFDLLRRPDVDYARLMSLDGGKYAS 541 Query: 525 -------ARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALS 577 S VIE+++I + YA Y RQ E + E+ +P + DY + ALS Sbjct: 542 GDVSRETLGALSEPVIEQVEIAAKYAGYIDRQKDEVQRAAHYEQLRLPPELDYMQVSALS 601 Query: 578 NELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 E+++KL +P L QAS+I G+TPAA++LLL+++KK K Sbjct: 602 IEVRQKLQKHRPETLGQASRISGVTPAAISLLLVHLKKGGFK 643 >gi|194016647|ref|ZP_03055261.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus pumilus ATCC 7061] gi|194012120|gb|EDW21688.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus pumilus ATCC 7061] Length = 628 Score = 805 bits (2079), Expect = 0.0, Method: Composition-based stats. Identities = 274/619 (44%), Positives = 394/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAG EAA +A+ GA T ++T + M CNP++GG KG +VREIDA Sbjct: 7 NYDVIVVGAGHAGVEAALASARQGAKTLVLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M R D IQ R+LN KGPAVR R QAD+ Y+ M++ + ++ NL ++QG V Sbjct: 67 LGGEMARNIDKTHIQMRMLNTGKGPAVRALRAQADKFQYQHEMKKTMENEPNLTMLQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + +V Q + R +VVLTTGTFL+G I +G L +G PS L + Sbjct: 127 DHLIVEDDECKGVVTQTGANYRAKSVVLTTGTFLKGRIILGDLSYSSGPNNQQPSIKLSD 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ +I + KTE Q D+ FS+ T + Q+ C +T Sbjct: 187 HLAELGFDLVRFKTGTPPRVNSHSIDYSKTEIQPGDDVPRAFSYETVEYITDQLPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+LETH+II EN+ S +YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSLETHQIIDENLHRSPMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q + + TIPGLE V ++R GYAIEYD I P +L+PTLETKKISGL+ Sbjct: 307 VYVQGLSTSLPEDVQQRMLSTIPGLENVQMMRAGYAIEYDAIVPTQLWPTLETKKISGLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QG++AGIN+ RK+ + + SR+D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGIMAGINAGRKALGKEEVILSRSDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL-----K 479 R+ TSRAEYR+ LR DNAD RLT +G +G I + R + + + + + L K Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTELGYHIGLISQERFQAYQQKKEAIEAEKKRLYSVIIK 486 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 T + + S S +DG A + + P+ + +++ ++ P + S V E+++I+ Sbjct: 487 PTAETQEFIRSLGGSELKDGIR--ASDLMKRPEMNYESVVTLAPAETQLPSDVCEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + +++K E + IP DY ++ ++ E K+KL ++P ++ QAS+I Sbjct: 545 IKYEGYIEKSLQQVEKLKKMENKKIPDRIDYDAIKGIATEAKQKLKEVRPLSVAQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+Y+++ + Sbjct: 605 GVNPADISILLVYLEQGRI 623 >gi|254491056|ref|ZP_05104237.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Methylophaga thiooxidans DMS010] gi|224463569|gb|EEF79837.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Methylophaga thiooxydans DMS010] Length = 627 Score = 805 bits (2079), Expect = 0.0, Method: Composition-based stats. Identities = 287/621 (46%), Positives = 390/621 (62%), Gaps = 4/621 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 YDVIV+GGGHAG EAA +A+ G T L+T T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 YQDHYDVIVVGGGHAGTEAALASARQGVKTLLLTQNIETLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G+M + AD GIQFR LN KGPAVR R QADR Y+ A++ + +Q NL + Q Sbjct: 63 IDALGGIMAQAADRGGIQFRTLNSSKGPAVRATRAQADRVRYKAAVRAYLENQPNLYIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E + + +V Q +VVLT GTFL G+IHIG GR GD S + Sbjct: 123 QAVDDLVVENDRVVGVVTQVGLRFSAKSVVLTVGTFLGGLIHIGMQNHQGGRAGDPASIA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIEC 240 L F RLKTGTP R+ +I + +Q D FSF+ + + RQI C Sbjct: 183 LSQRLRSLPFRVDRLKTGTPPRIATSSIDFSVLTEQPGDNPTPVFSFLGKQADHPRQISC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN TH +I N+ S +YSG+I+ GPRYCPSIEDK+VRF +R HQIFLEPEGL Sbjct: 243 YITHTNEHTHEVIRNNLDRSPMYSGEIEGIGPRYCPSIEDKVVRFADRTAHQIFLEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 VYPNGIST+LP ++Q++ +R++ GLE +I RPGYAIEYD+ +P++L PTLETK + Sbjct: 303 EPGEVYPNGISTSLPFDVQYEIVRSMKGLENAHITRPGYAIEYDFFDPRDLQPTLETKHM 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQINGTTGYEEA AQGL+AG+N+ ++ LD R ++YIGV+IDDL + G Sbjct: 363 GGLFFAGQINGTTGYEEAGAQGLIAGLNAGLQARGLDGWYPRRDEAYIGVLIDDLITSGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLTP+G +LG + + R F+ + L+S Sbjct: 423 REPYRMFTSRAEYRLMLREDNADIRLTPVGRQLGIVDDERWAIFSAKQDAVAKENARLES 482 Query: 481 LVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 + + ++ ++ ++ K +A E L P L + + + V E++ Sbjct: 483 FKFVPEKIDQTTAEAVLGEKLNKVTSAIELLRRPKVDYAMLLELMGTEQAVADDVAEQVV 542 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I++ Y+ Y RQ E ++ E +P + DY ++ LSNE++EKL +P NL QA++ Sbjct: 543 IQTKYSGYINRQQNEIDRLQRNENMSLPTNMDYKNVRGLSNEVREKLEQARPVNLGQAAR 602 Query: 598 IEGMTPAALNLLLIYIKKNTV 618 I G+TPAA++LLL+++K++ + Sbjct: 603 ISGVTPAAVSLLLVHLKRSGL 623 >gi|223041389|ref|ZP_03611593.1| glucose-inhibited division protein A [Actinobacillus minor 202] gi|223017779|gb|EEF16185.1| glucose-inhibited division protein A [Actinobacillus minor 202] Length = 630 Score = 805 bits (2079), Expect = 0.0, Method: Composition-based stats. Identities = 292/623 (46%), Positives = 388/623 (62%), Gaps = 5/623 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + N++YDVIV+GGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 IYNKTYDVIVVGGGHAGTEAALAPARMGLKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDA+ GLM D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Sbjct: 62 EIDAMGGLMATATDKAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q EV E N V + + V+LT GTFL G IHIG GR GD + Sbjct: 122 QQEVVDILVENNRAVGAVTKMGLTFKAKAVILTAGTFLAGKIHIGLDNYAGGRAGDPAAT 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIE 239 L + + RLKTGTP RLD +TI +D KQ D+ L SFM + RQI Sbjct: 182 MLADRLRDLNLRVDRLKTGTPPRLDARTINFDVLAKQHGDDVLPVMSFMGSVEQHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I ++ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEG Sbjct: 242 CYITHTNEQTHDLIRNSLDRSPMYTGIIEGIGPRYCPSIEDKVMRFSDRNSHQIYLEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T VYPNGIST+LP ++Q + ++ GLE II+PGYAIEYDY +P++L PTLETK Sbjct: 302 LTTIEVYPNGISTSLPFDVQMGIVNSMKGLENTRIIKPGYAIEYDYFDPRDLKPTLETKA 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AGIN+ + + +R +Y GV++DDL + G Sbjct: 362 IDGLFFAGQINGTTGYEEAAAQGLLAGINAGLQVQGKEAWFPTRDLAYTGVLVDDLCTLG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYR+FTSRAEYR+ LR DNAD RLTPI + G I E R RF + ++ ++ LK Sbjct: 422 TKEPYRVFTSRAEYRLLLREDNADARLTPIAHQFGLIDEARWTRFNEKMENIEKEKARLK 481 Query: 480 SLVLTSKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIER 535 + + ++ + + + + + P+ + + L I P A E+ Sbjct: 482 QTWAHLQMANLAEVNALLNSPLAREASGEDLIRRPEVTYEALTQIAPFAPAIEDKEAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I Y Y Q E + K E IP +FDY + +LSNE++ KL +P ++ QA Sbjct: 542 VEISIKYQGYIEHQQQEIERHKRHENTQIPAEFDYDKVESLSNEVRAKLMQHRPVSIGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV 618 S+I G+TPAA+++LL+ +KK + Sbjct: 602 SRISGITPAAISILLVNLKKQGM 624 >gi|260774535|ref|ZP_05883448.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio metschnikovii CIP 69.14] gi|260610441|gb|EEX35647.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio metschnikovii CIP 69.14] Length = 631 Score = 805 bits (2079), Expect = 0.0, Method: Composition-based stats. Identities = 285/630 (45%), Positives = 393/630 (62%), Gaps = 6/630 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA AA+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHETFDVIVVGGGHAGTEAALAAARTGQRTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRHALENMPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q E++ + +V Q +VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQAADDLIVEQDHVRGVVTQMGLKFHAKSVVLTVGTFLGGKIHIGLENFSGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D +++ + + E Q D FSFM + + RQI Sbjct: 182 ALAHRLRELPFRVDRLKTGTPPRIDARSVDFSQLEAQHGDNPTPVFSFMGKREQHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CFITHTNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFSDKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTTELYPNGISTSLPFDVQVQIVRSMQGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I+GLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 INGLFFAGQINGTTGYEEAAAQGLMAGLNASLYSQDKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG + E+R RF + ++ R LK Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEKAYQLGLVCEQRWARFNQKVEHMQQERQRLK 481 Query: 480 SLVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIER 535 + + + +++ + + L P+ + Q + SI + S E+ Sbjct: 482 ETWINPTSTDAEALNALLKTPISREANGEDLLRRPEMTYQQVTSIATFSPAIEDSEAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y RQ E ++ E +P D DY + LSNE+ KL+ KP L A Sbjct: 542 VEIQVKYEGYIQRQRDEIEKSLRHEHTKLPADLDYQQVKGLSNEVVLKLNAAKPETLGIA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNT-VKLNEIV 624 S+I G+TPAA+++LL+++KK +K E Sbjct: 602 SRISGITPAAISILLVHLKKQGLLKKGEAA 631 >gi|83649685|ref|YP_438120.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Hahella chejuensis KCTC 2396] gi|123529920|sp|Q2S6M9|MNMG_HAHCH RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|83637728|gb|ABC33695.1| glucose-inhibited division protein A [Hahella chejuensis KCTC 2396] Length = 629 Score = 805 bits (2079), Expect = 0.0, Method: Composition-based stats. Identities = 289/619 (46%), Positives = 397/619 (64%), Gaps = 4/619 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +S+DVIVIGGGHAG EAA AA++G+ T L+TH T+G MSCNPAIGG+GK HLV+E Sbjct: 3 FPKSFDVIVIGGGHAGTEAALAAARMGSQTLLLTHNIETLGQMSCNPAIGGIGKSHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DAL G M D AGIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 63 VDALGGAMALATDRAGIQFRVLNSRKGPAVRATRAQADRALYKAAIREILENQPNLTIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 + + ++ +V Q TVVLTTGTFL GVIHIG GR GD PS + Sbjct: 123 QAADDLIMQGDHVAGVVTQMGLRFHSKTVVLTTGTFLGGVIHIGLENHSGGRAGDPPSIA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IEC 240 L + F GRLKTGTP R+D +++ + E Q D + SFM + + C Sbjct: 183 LAKRLREMPFRVGRLKTGTPPRIDARSVDFSVMEAQPGDTPIPVMSFMGSVDLHPHQVNC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 ITRTN TH II + S +Y+G I+ GPRYCPSIEDK+ RF +++ HQ+F+EPEGL Sbjct: 243 FITRTNERTHEIIRGGMDRSPMYTGVIEGVGPRYCPSIEDKVNRFSDKDSHQVFIEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 +T +YPNGIST+LP ++Q Q + +I G+E +I RPGYAIEYD+ NP++L +LETK + Sbjct: 303 STHELYPNGISTSLPFDVQLQLVHSIQGMENAHITRPGYAIEYDFFNPQDLKHSLETKFV 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 LF AGQINGTTGYEEAAAQGL+AG+N+A ++ + + R ++YIGV++DDL + G Sbjct: 363 GSLFFAGQINGTTGYEEAAAQGLLAGMNAALRAQEKEAWSPRRDEAYIGVLVDDLITMGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT G +LG I + R + F + + + LKS Sbjct: 423 REPYRMFTSRAEYRLLLREDNADLRLTEKGRELGMIDDERWRVFCEKREAIAREQQRLKS 482 Query: 481 LVLTS---KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 + + K + + + + + ++ L P+ + + L + D V E+L+ Sbjct: 483 IWIQPATEKARKAAELLETELTREYSLHDLLKRPEMTWEKLSLLDADVAATPYEVAEQLE 542 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ YA Y RQ E + ++ E +P D DYS + LSNE+K+KL+ ++P L QAS+ Sbjct: 543 IQVKYAGYIDRQQEEIERLRRNENMALPADLDYSGIQGLSNEIKQKLTEVRPETLAQASR 602 Query: 598 IEGMTPAALNLLLIYIKKN 616 I G+TPAA++LLL+++KK Sbjct: 603 IPGVTPAAVSLLLVHLKKR 621 >gi|109900604|ref|YP_663859.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudoalteromonas atlantica T6c] gi|123063991|sp|Q15MT3|MNMG_PSEA6 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|109702885|gb|ABG42805.1| glucose inhibited division protein A [Pseudoalteromonas atlantica T6c] Length = 633 Score = 805 bits (2079), Expect = 0.0, Method: Composition-based stats. Identities = 296/622 (47%), Positives = 395/622 (63%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +DVIV+GGGHAG EAA AA++G+ T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 YQQQFDVIVVGGGHAGTEAALAAARMGSKTLLLTHNVETLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M + D GIQFR LN KGPAVR R QADR LYR A++ + Q+NL + Q Sbjct: 63 IDALGGSMAKAIDKGGIQFRTLNSSKGPAVRATRAQADRSLYRSAIRDIVEHQDNLTLFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 E + ++ +V Q R +VV+T GTFL G IHIG GR GD PS + Sbjct: 123 QSCDDLIVENDQVTGVVTQMGLKFRAKSVVITVGTFLGGTIHIGMENYKGGRAGDPPSIA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIEC 240 L + F RLKTGTPARLD +T+ + ++Q D FSFM + + RQI C Sbjct: 183 LADRLRALPFRVSRLKTGTPARLDARTLDYSVMQEQLGDSPTPVFSFMGKREDHPRQIAC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH II + S +Y+G I+ GPRYCPSIEDKI RF +++ HQIF+EPEGL Sbjct: 243 YITHTNSKTHDIIRGGLDRSPMYTGVIEGIGPRYCPSIEDKINRFADKDSHQIFVEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 N+ VYPNGIST+LP ++Q + +R+I G E +IIRPGYAIEYD+ +P++L TLETK I Sbjct: 303 NSIEVYPNGISTSLPFDVQFELVRSIKGFENAHIIRPGYAIEYDFFDPRDLKQTLETKFI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQINGTTGYEEA AQGL+AG N++ + D + R ++Y+GV+IDDL + G Sbjct: 363 KGLFFAGQINGTTGYEEAGAQGLIAGANASLQCQGKDPLILRRDEAYMGVLIDDLATMGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT G +LG + E R + F ++ R L+ Sbjct: 423 KEPYRMFTSRAEYRLLLREDNADIRLTAKGHELGLVDEERWQAFNIKLEAIELERQRLRD 482 Query: 481 LVLTSKNLSSTSISF---KQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 + K+ ++ +++ K T + + P+ + + L ++ E++ Sbjct: 483 TWVHPKHAAAEALNPLLKNALSKENTLEDLIRRPEMTYETLMNVTEFGPGITDPKAAEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ YA Y RQ E + + E LIP DFDYS + LSNE+ KLS KP L AS Sbjct: 543 EIQIKYAGYIERQQDEIAKSRKNENTLIPLDFDYSQISGLSNEVVAKLSDAKPETLGLAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA++LLL+Y+KK+ + Sbjct: 603 RISGITPAAISLLLVYLKKHGL 624 >gi|238765116|ref|ZP_04626050.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Yersinia kristensenii ATCC 33638] gi|238696668|gb|EEP89451.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Yersinia kristensenii ATCC 33638] Length = 629 Score = 805 bits (2079), Expect = 0.0, Method: Composition-based stats. Identities = 292/619 (47%), Positives = 393/619 (63%), Gaps = 5/619 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA Sbjct: 6 QFDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLM D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 66 LGGLMAMATDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQPV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + V + R VVLT GTFL G IHIG GR GD PS SL Sbjct: 126 EDLIVENDRVVGAVTKMGLKFRAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPSISLSQ 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGIT 243 + RLKTGTP R+D +TI + + Q D + FSF+ + + Q+ C IT Sbjct: 186 RLRELPLRVNRLKTGTPPRIDARTIDFSQLAPQLGDTPIPVFSFLGNADQHPEQMACHIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 246 YTNEKTHDVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNSHQIFLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q Q +R++ GLE IIRPGYAIEYD+ +P++L PTLE+K I GL Sbjct: 306 EIYPNGISTSLPFDVQMQIVRSMKGLENARIIRPGYAIEYDFFDPRDLKPTLESKYIQGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+ R +N D R ++Y+GV++DDL++ G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGLNAGRFANDDDGWSPRRDEAYLGVLVDDLSTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT +G KLG + + R F++ I++ R L+ + + Sbjct: 426 YRMFTSRAEYRLMLREDNADLRLTEMGRKLGLVDDARWAHFSQKIEQIEKERQRLRDIWV 485 Query: 484 TSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIE 539 + + I+ K E L P+ + L ++ ++++I+ Sbjct: 486 HPHSENVAEINALLKAPLSKEANGEELLRRPEIDYRLLTTLPSFGPALTDPQAADQVEIQ 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ E ++ E L+P D DY + LSNE+ KL+ KP ++ QAS+I Sbjct: 546 VKYQGYIARQQEEIEKQLRNENTLLPADLDYRQVSGLSNEVIAKLNDHKPNSIGQASRIS 605 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+TPAA+++LL+++KK + Sbjct: 606 GITPAAISILLVWLKKQGL 624 >gi|212712654|ref|ZP_03320782.1| hypothetical protein PROVALCAL_03749 [Providencia alcalifaciens DSM 30120] gi|212684870|gb|EEB44398.1| hypothetical protein PROVALCAL_03749 [Providencia alcalifaciens DSM 30120] Length = 629 Score = 805 bits (2079), Expect = 0.0, Method: Composition-based stats. Identities = 289/620 (46%), Positives = 391/620 (63%), Gaps = 5/620 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLVREID Sbjct: 5 EQFDVIVIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVREID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL GLM D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NL + Q Sbjct: 65 ALGGLMATATDKAGIQFRTLNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQP 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E N ++ V + + VVLT GTFL G IHIG GR GD P+ +L Sbjct: 125 VEDLIVENNRVTGAVTRMGLKFKAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPAITLS 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGI 242 + RLKTGTP R+D +TI + + +Q D+ + FSF+ + + Q + C I Sbjct: 185 QRLRELPLRVNRLKTGTPPRIDARTIDFSQLAQQLGDDPMPVFSFLGSQEQHPQQVPCYI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIFLEPEGL + Sbjct: 245 TYTNEQTHDVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADKNAHQIFLEPEGLTS 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + +YPNGIST+LP ++Q Q + ++ G+E I+RPGYAIEYD+ +P++L TLE+K I G Sbjct: 305 NEIYPNGISTSLPFDVQMQIVHSMKGMENARIVRPGYAIEYDFFDPRDLKQTLESKFIEG 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AG+N+A+ + LD R +Y+GV++DDL + G E Sbjct: 365 LFFAGQINGTTGYEEAAAQGLLAGLNAAQHAFGLDGWFPRRDQAYVGVLVDDLCTLGTKE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT G +LG + + R + F + ++ R LK + Sbjct: 425 PYRMFTSRAEYRLMLREDNADLRLTEKGRELGLVDDVRWEHFNRKVELIEKERQRLKDIW 484 Query: 483 LTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQI 538 + K+ + I K + L P+ + Q L S+ A ++++I Sbjct: 485 VHPKSDNHEEIDQILTVPLSKEANGEDLLRRPEMTYQMLTSLNLFAPGVEDPQAADQVEI 544 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + Y Y RQ E + E L+P D DY + LSNE+ KL+ KP ++ QAS+I Sbjct: 545 QVKYEGYIARQQEEIERQLRNENTLLPVDLDYKQVKGLSNEVMAKLNDHKPTSIGQASRI 604 Query: 599 EGMTPAALNLLLIYIKKNTV 618 G+TPAA+++LL+++KK + Sbjct: 605 SGITPAAISILLVWLKKQGM 624 >gi|307731470|ref|YP_003908694.1| glucose inhibited division protein A [Burkholderia sp. CCGE1003] gi|307586005|gb|ADN59403.1| glucose inhibited division protein A [Burkholderia sp. CCGE1003] Length = 652 Score = 804 bits (2078), Expect = 0.0, Method: Composition-based stats. Identities = 284/631 (45%), Positives = 387/631 (61%), Gaps = 15/631 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + +DVIV+GGGHAG EAA +A++G T L+TH T+G MSCNP+IGG+GKGHLV+ Sbjct: 2 LFPTEFDVIVVGGGHAGTEAALASARMGNKTLLLTHNIETLGQMSCNPSIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DAL G M D GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Sbjct: 62 EVDALGGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRLLYKQAIRHRLENQPNLWLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + + V Q R VVLT GTFL G IH+G GR GD + Sbjct: 122 QQAVDDLMVEGDRVVGAVTQVGIRFRSRAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAV 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQI 238 SL + GRLKTGTP R+DG+TI + + E+Q D +P FSF+ + RQ+ Sbjct: 182 SLSARLKELKLPQGRLKTGTPPRIDGRTIDFSQLEEQPGDLDPVPVFSFLGRAEQHPRQV 241 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C +T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPE Sbjct: 242 PCWVTHTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFATKESHQIFLEPE 301 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL T+ YPNGIST+LP ++Q + +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 302 GLTTNEFYPNGISTSLPFDVQLELVRSMRGLEHAHILRPGYAIEYDYFDPRGLKASLETK 361 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I+GLF AGQINGTTGYEEAAAQGL+AGIN+ D C R +Y+GV++DDL ++ Sbjct: 362 VINGLFFAGQINGTTGYEEAAAQGLLAGINAGLFVQGRDAWCPRRDQAYLGVLVDDLVTR 421 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 GV EPYRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F++ + L Sbjct: 422 GVSEPYRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDDARWDAFSRKRDAVSRETERL 481 Query: 479 KSLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----------CPDA 525 ++ + K L +T++ K + E L P S + ++ + Sbjct: 482 RTTWVNPKTLSADEATALLGKPIDHEYSLAELLRRPGVSYDGVCALREGTCAAPGPLAED 541 Query: 526 RKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 + + E+++I Y Y RQ E + + E +P DY+ + LS E ++KL+ Sbjct: 542 EVLLAQIKEQIEIGIKYQGYIDRQAGEIERNEAHESTRLPDGLDYAEVRGLSFEARQKLT 601 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYIKKN 616 +P + QAS+I G+TPAA++LL++++K+ Sbjct: 602 QFRPETIGQASRISGITPAAISLLMVHLKRG 632 >gi|307547045|ref|YP_003899524.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Halomonas elongata DSM 2581] gi|307219069|emb|CBV44339.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Halomonas elongata DSM 2581] Length = 631 Score = 804 bits (2078), Expect = 0.0, Method: Composition-based stats. Identities = 288/617 (46%), Positives = 393/617 (63%), Gaps = 5/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA +A+ G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FDVIVIGGGHAGTEAALASARTGCRTLLLTHNIETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G MG D GIQFRVLN +KGPAVR R QADR Y+ A++ + +Q NL + Q Sbjct: 67 GGAMGLATDMGGIQFRVLNARKGPAVRATRAQADRVRYKAAIRGMLENQANLTIFQQAAG 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + + + TVVL TGTFL GVIHIG GR GD PSN+L Sbjct: 127 DLIVEGDQVRGVCTETGIRFMSETVVLCTGTFLGGVIHIGLDNSRGGRAGDPPSNALAER 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 F RLKTGTP RLD K++ + K ++Q DE S++ ++ + RQ+ C I Sbjct: 187 LRALPFRVDRLKTGTPPRLDAKSVDFSKLDEQPGDEPTPVMSYLGERSQHPRQVSCHIAH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N++ S ++SG I+ GPRYCPSIEDK+ RF +++ HQIF+EPEGL+T Sbjct: 247 TNERTHEIIHANLERSPMFSGVIEGVGPRYCPSIEDKVHRFADKSSHQIFVEPEGLDTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R+I GLE +I RPGYAIEYD+ +P++L +LETK I L+ Sbjct: 307 LYPNGISTSLPFDVQLQVVRSIQGLENAHITRPGYAIEYDFFDPRDLKHSLETKFIHNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG+N+AR++ LD R ++Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGLNAARRARGLDAWWPRRDEAYLGVLVDDLITLGTREPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + ERR F+ + S L+S + Sbjct: 427 RMFTSRAEYRLLLREDNADMRLTETGRELGLVDERRWTAFSAKREAVERETSRLRSSWVQ 486 Query: 485 SKNLSSTSIS---FKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 + ++ IS + + + L P+ +++ + + + V E++QI++ Sbjct: 487 PGSEAARRISETTGQSLKREYNLLDLLKRPEIGYRDVAGLVGEPVD-NDQVAEQVQIQAK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y RQ E ++K E +P D DY + LSNE+++KL +P L QAS+I G+ Sbjct: 546 YQGYIDRQQDEIDKLKRHEATPLPDDLDYDQVDGLSNEIRQKLVEARPETLAQASRISGV 605 Query: 602 TPAALNLLLIYIKKNTV 618 TPAA+++LLI++KK + Sbjct: 606 TPAAVSILLIHLKKRRL 622 >gi|186477785|ref|YP_001859255.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia phymatum STM815] gi|238691317|sp|B2JJL1|MNMG_BURP8 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|184194244|gb|ACC72209.1| glucose inhibited division protein A [Burkholderia phymatum STM815] Length = 652 Score = 804 bits (2078), Expect = 0.0, Method: Composition-based stats. Identities = 287/627 (45%), Positives = 388/627 (61%), Gaps = 15/627 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVIV+GGGHAG EAA +A++G T L+TH T+G MSCNP+IGG+GKGHLV+E+DA Sbjct: 6 EFDVIVVGGGHAGTEAALASARMGNKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 66 LGGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRILYKAAIRHRLENQPNLWLFQQSV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + V Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 126 DDLMVEGDRVVGAVTQVGVRFRSRAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSA 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTD-KITNRQIECGI 242 + GRLKTGTP R+DG+TI + K E+Q D IP FSF+ + RQ+ C + Sbjct: 186 RLKELKLPQGRLKTGTPPRIDGRTIDFSKLEEQPGDLDPIPVFSFLGRVEQHPRQVPCWV 245 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPEGL T Sbjct: 246 THTNAQTHDIIRSGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPEGLTT 305 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + YPNGIST+LP ++Q + +R++ GLE +I+RPGYAIEYDY +P+ L +LETK ISG Sbjct: 306 NEFYPNGISTSLPFDVQLELVRSMVGLEHAHILRPGYAIEYDYFDPRGLKASLETKAISG 365 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AGIN+ C R +Y+GV++DDL ++GV E Sbjct: 366 LFFAGQINGTTGYEEAAAQGLLAGINAGLYVQSKGPWCPRRDQAYLGVLVDDLVTRGVSE 425 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F++ + L++ Sbjct: 426 PYRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDDVRWDAFSRKRDAVSRETERLRTTW 485 Query: 483 LTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI-----CPDAR-----KFS 529 + K L +T++ K + + L P S + + PD Sbjct: 486 VNPKTLSSEEATALLGKPIDHEYSLADLLRRPGVSYDGICGLREGTCGPDEALAHDDVLL 545 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 + + E+++I Y Y RQ E + + E +P++ DY+ + LS E ++KL+ +P Sbjct: 546 AQIKEQIEIGVKYQGYIERQAGEIERNEAHENTRLPENLDYTEVRGLSFEARQKLTQFRP 605 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKKN 616 + QAS+I G+TPAA++LL++++K+ Sbjct: 606 ETIGQASRISGITPAAISLLMVHLKRG 632 >gi|238750333|ref|ZP_04611835.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Yersinia rohdei ATCC 43380] gi|238711566|gb|EEQ03782.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Yersinia rohdei ATCC 43380] Length = 629 Score = 804 bits (2078), Expect = 0.0, Method: Composition-based stats. Identities = 293/619 (47%), Positives = 394/619 (63%), Gaps = 5/619 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA Sbjct: 6 QFDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLM D AGIQFR+LN KGPAVR R QADR LYRLA++ + +Q NL + Q V Sbjct: 66 LGGLMAMATDKAGIQFRILNASKGPAVRATRAQADRVLYRLAVRTALENQPNLMIFQQPV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + V + R VVLT GTFL G IHIG GR GD PS SL Sbjct: 126 EDLIVENDKVVGAVTKMGLKFRAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPSISLSQ 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGIT 243 + RLKTGTP RLD +TI + + Q D + FSF+ + + Q+ C IT Sbjct: 186 RLRELPLRVNRLKTGTPPRLDARTIDFSQLAPQLGDTPIPVFSFLGNASQHPEQMACHIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 246 YTNEKTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNSHQIFLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q Q +R++ GLE IIRPGYAIEYD+ +P++L PTLE+K I GL Sbjct: 306 EIYPNGISTSLPFDVQMQIVRSMKGLENARIIRPGYAIEYDFFDPRDLKPTLESKYIHGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+ R +N D R ++Y+GV++DDL++ G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGLNAGRFANDEDGWSPRRDEAYLGVLVDDLSTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT +G KLG + + R F++ I++ R L+ + + Sbjct: 426 YRMFTSRAEYRLMLREDNADLRLTEMGRKLGLVDDARWAHFSQKIEQIEKERQRLRDIWV 485 Query: 484 TSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIE 539 + + + I+ K E L P+ + L ++ ++++I+ Sbjct: 486 HPHSENVSEINGLLKAPLSKEANGEELLRRPEIDYRLLTALPSFGPALTDPQAADQVEIQ 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ E ++ E +P D DY + LSNE+ KL+ KP ++ QAS+I Sbjct: 546 VKYEGYIARQQEEIEKQLRNENTALPADLDYRQVSGLSNEVIAKLNDHKPSSIGQASRIS 605 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+TPAA+++LL+++KK + Sbjct: 606 GITPAAISILLVWLKKQGL 624 >gi|332308610|ref|YP_004436461.1| glucose inhibited division protein A [Glaciecola agarilytica 4H-3-7+YE-5] gi|332175939|gb|AEE25193.1| glucose inhibited division protein A [Glaciecola agarilytica 4H-3-7+YE-5] Length = 633 Score = 804 bits (2078), Expect = 0.0, Method: Composition-based stats. Identities = 296/622 (47%), Positives = 393/622 (63%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +DVIV+GGGHAG EAA AA++G++T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 YQQQFDVIVVGGGHAGTEAALAAARMGSNTLLLTHNIETLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M D AGIQFR LN KGPAVR R QADR LYR A++ + Q+NL + Q Sbjct: 63 IDALGGSMATAIDKAGIQFRTLNSSKGPAVRATRAQADRSLYRSAIRDIVEHQDNLTIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 E + ++ +V Q +VV+T GTFL G IHIG GR GD PS + Sbjct: 123 QSCDDLIVENDQVTGVVTQMGLKFHARSVVITVGTFLGGTIHIGMENYKGGRAGDPPSIA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIEC 240 L + F RLKTGTPARLD +T+ + ++Q D FSFM + + RQI C Sbjct: 183 LADRLRALPFRVSRLKTGTPARLDARTLDYSVMQEQLGDSPTPVFSFMGKREDHPRQIAC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH II + S +Y+G I+ GPRYCPSIEDKI RF +++ HQIF+EPEGL Sbjct: 243 YITHTNSKTHDIIRGGLDRSPMYTGVIEGIGPRYCPSIEDKINRFADKDSHQIFVEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 N+ VYPNGIST+LP ++Q + +R+I G E +IIRPGYAIEYD+ +P++L TLETK I Sbjct: 303 NSIEVYPNGISTSLPFDVQFELVRSIKGFENAHIIRPGYAIEYDFFDPRDLKQTLETKFI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQINGTTGYEEA AQGLVAG N++ + D + R ++Y+GV+IDDL + G Sbjct: 363 KGLFFAGQINGTTGYEEAGAQGLVAGANASLQCQGKDPLILRRDEAYMGVLIDDLATMGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT G +LG + E R + F + ++ R L+ Sbjct: 423 KEPYRMFTSRAEYRLLLREDNADIRLTTKGHELGLVDEERWQAFNRKLEAIELERQRLRD 482 Query: 481 LVLTSKNLSS---TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 + K+ ++ + K T + + P+ + + L + E++ Sbjct: 483 TWVHPKHAAADVLNPLLKNALSKENTLEDLIRRPEMTYETLMKVTDFGPGIADPKAAEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ YA Y RQ E + + E LIP DFDYS + LSNE+ KL+ KP L AS Sbjct: 543 EIQIKYAGYIERQQEEIAKSRKNENTLIPVDFDYSQISGLSNEVVAKLTDAKPETLGLAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA++LLL+Y+KK+ + Sbjct: 603 RISGITPAAISLLLVYLKKHGL 624 >gi|238797882|ref|ZP_04641374.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Yersinia mollaretii ATCC 43969] gi|238718298|gb|EEQ10122.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Yersinia mollaretii ATCC 43969] Length = 629 Score = 804 bits (2078), Expect = 0.0, Method: Composition-based stats. Identities = 294/619 (47%), Positives = 395/619 (63%), Gaps = 5/619 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA Sbjct: 6 QFDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 66 LGGLMAKATDLAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQPV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + V + R VVLT GTFL G IHIG GR GD PS SL Sbjct: 126 EDLIVENDRVVGAVTKMGLKFRAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPSISLSQ 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGIT 243 + RLKTGTP RLD +TI + + Q D + FSF+ + + Q+ C IT Sbjct: 186 RLRELPLRVNRLKTGTPPRLDARTIDFSQLVPQLGDTPIPVFSFLGNAEQHPEQMACHIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 246 YTNEKTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNSHQIFLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q Q +R++ GLE IIRPGYAIEYD+ +P++L PTLE+K I GL Sbjct: 306 EIYPNGISTSLPFDVQMQIVRSMKGLENARIIRPGYAIEYDFFDPRDLKPTLESKYIHGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+ R +N D R ++Y+GV++DDL++ G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGLNAGRFANDEDGWSPRRDEAYLGVLVDDLSTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT +G KLG + + R F+K I++ R L+ + + Sbjct: 426 YRMFTSRAEYRLMLREDNADLRLTEMGRKLGLVDDARWAHFSKKIEQIEKERQRLRDIWV 485 Query: 484 TSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIE 539 + + + I+ K E L P+ + L ++ ++++I+ Sbjct: 486 HPHSENVSEINALLKAPLSKEANGEELLRRPEIDYRLLTTLPSFGPALTDPQAADQVEIQ 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ E ++ E L+P D DY + LSNE+ KL+ KP ++ QAS+I Sbjct: 546 VKYEGYIARQQEEIEKQLRNENTLLPVDLDYRQVSGLSNEVIAKLNDHKPNSIGQASRIS 605 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+TPAA+++LL+++KK + Sbjct: 606 GITPAAISILLVWLKKQGL 624 >gi|83719253|ref|YP_443812.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Burkholderia thailandensis E264] gi|167620986|ref|ZP_02389617.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia thailandensis Bt4] gi|123536041|sp|Q2STD7|MNMG_BURTA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|83653078|gb|ABC37141.1| glucose-inhibited division protein A [Burkholderia thailandensis E264] Length = 657 Score = 804 bits (2078), Expect = 0.0, Method: Composition-based stats. Identities = 287/629 (45%), Positives = 389/629 (61%), Gaps = 15/629 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DA Sbjct: 6 EFDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D GIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q V Sbjct: 66 LGGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRVLYKQAIRRYLENQPNLWLFQQAV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + V Q R VVLT GTFL G IH+G GR GD + SL + Sbjct: 126 DDLMVEGDRVVGAVTQVGVRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSS 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITNR-QIECGI 242 + GRLKTGTP R+DG+TI + K E+Q D +P FSF+ + Q+ C + Sbjct: 186 RLKELKLPQGRLKTGTPPRIDGRTIDFSKLEEQPGDLDPVPVFSFLGRPEQHPEQLPCWV 245 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T Sbjct: 246 THTNERTHDIIRSGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLTT 305 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + YPNGIST+LP ++Q + ++ GLE+ +I+RPGYAIEYDY +P+ L +LETK I+G Sbjct: 306 NEFYPNGISTSLPFDVQLALVHSMRGLEQAHILRPGYAIEYDYFDPRALKSSLETKAING 365 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AGIN+ R + + + C R +Y+GV++DDL ++GV E Sbjct: 366 LFFAGQINGTTGYEEAAAQGLLAGINAGRHALEKEAWCPRRDQAYLGVLVDDLVTRGVSE 425 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F + + L++ Sbjct: 426 PYRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDDVRWDAFNRKRDAVSRETERLRTTW 485 Query: 483 LTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----------CPDARKFS 529 +T K L +T + K + E L P S + + + Sbjct: 486 VTPKTLPADEATELLGKPIDHEYSLAELLRRPGISYDGVCGLRGGECGPSEPLAEDALLL 545 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 + + E+++I Y Y RQ E + E +P DY+ + LS E+ +KL+ +P Sbjct: 546 AQIKEQIEIGIKYQGYIERQAGEIERNGANENTRLPDGIDYTEVRGLSFEVSQKLNQFRP 605 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKKNTV 618 + QAS+I G+TPAA++LL++++KK + Sbjct: 606 ETIGQASRISGVTPAAISLLMVHLKKRGL 634 >gi|167838437|ref|ZP_02465296.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia thailandensis MSMB43] Length = 657 Score = 804 bits (2078), Expect = 0.0, Method: Composition-based stats. Identities = 288/629 (45%), Positives = 388/629 (61%), Gaps = 15/629 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DA Sbjct: 6 EFDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 66 LGGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRVLYKQAIRHRLENQPNLWLFQQAV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + V Q R VVLT GTFL G IH+G GR GD + SL + Sbjct: 126 DDLMVEGDRVVGAVTQVGVRFRARAVVLTAGTFLDGKIHVGLNHYTGGRAGDPAAVSLSS 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITNRQ-IECGI 242 + GRLKTGTP R+DG+TI + K E+Q D IP FSF+ + Q + C + Sbjct: 186 RLKELKLPQGRLKTGTPPRIDGRTIDFSKLEEQPGDLDPIPVFSFLGRAEQHPQQLPCWV 245 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T Sbjct: 246 THTNERTHDIIRSGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLTT 305 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + YPNGIST+LP ++Q + ++ GLE+ +I+RPGYAIEYDY +P+ L +LETK I G Sbjct: 306 NEFYPNGISTSLPFDVQLALVHSMRGLEQAHILRPGYAIEYDYFDPRALKSSLETKAIHG 365 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AGIN+ R + + + C R +Y+GV++DDL ++GV E Sbjct: 366 LFFAGQINGTTGYEEAAAQGLLAGINAGRYAQEKEAWCPRRDQAYLGVLVDDLVTRGVSE 425 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F + + L++ Sbjct: 426 PYRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDDVRWDAFNRKRDAVSRETERLRTTW 485 Query: 483 LTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----------CPDARKFS 529 +T K L +T++ K + E L P S + + + Sbjct: 486 VTPKTLPADEATALLGKPIDHEYSLAELLRRPGVSYDGVCGLRGGEYGPSEPLAEDGLLL 545 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 + + E+++I Y Y RQ E + E +P DY+ + LS E+ +KL+ +P Sbjct: 546 AQIKEQIEIGIKYQGYIERQAGEIERNGANENTRLPDGIDYTEVRGLSFEVSQKLNQFRP 605 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKKNTV 618 + QAS+I GMTPAA++LL++++KK + Sbjct: 606 ETIGQASRISGMTPAAISLLMVHLKKRGL 634 >gi|258622945|ref|ZP_05717960.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Vibrio mimicus VM573] gi|258584728|gb|EEW09462.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Vibrio mimicus VM573] Length = 631 Score = 804 bits (2077), Expect = 0.0, Method: Composition-based stats. Identities = 284/630 (45%), Positives = 386/630 (61%), Gaps = 6/630 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA AA+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHETFDVIVVGGGHAGTEAALAAARTGQRTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRSVLENTPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + I +V Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQAVDDVIVENDHIRGVVTQMGLKFHAKAVVLTVGTFLGGKIHIGLENFAGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D ++ + E Q D FSFM + + RQI Sbjct: 182 ALAHRLRELPFRVDRLKTGTPPRIDANSVDFSVLEAQHGDNPTPVFSFMGKREHHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CYITHTNERTHDVIRANLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTTELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 IHGLFFAGQINGTTGYEEAAAQGLMAGLNASLYSQDKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG + + R RF + I R L+ Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLVDDERWARFNQKIDNMAKERQRLQ 481 Query: 480 SLVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIER 535 + ++ ++ + + + L P+ + + L ++ S E+ Sbjct: 482 ETWMNPNSVGVEQLNALLKTPMSREASGEDLLRRPEMTYELLTTLPAFTPALEDSEAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y RQ E ++ E +P D DY + LSNE+ KLS KP + A Sbjct: 542 VEIQVKYDGYIQRQQDEIEKSLRHEHTKLPIDLDYKQVKGLSNEVVLKLSTTKPETIGIA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV-KLNEIV 624 S+I G+TPAA+++LL+++KK+ + K E Sbjct: 602 SRISGITPAAISILLVHLKKHGMLKKGEAA 631 >gi|237814358|ref|YP_002898809.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei MSHR346] gi|237505862|gb|ACQ98180.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia pseudomallei MSHR346] Length = 657 Score = 804 bits (2077), Expect = 0.0, Method: Composition-based stats. Identities = 288/629 (45%), Positives = 389/629 (61%), Gaps = 15/629 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DA Sbjct: 6 EFDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D GIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q V Sbjct: 66 LGGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRVLYKQAIRRRLENQPNLWLFQQAV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + V Q R VVLT GTFL G IH+G GR GD + SL + Sbjct: 126 DDLMVEGDRVVGAVTQVGVRFRARAVVLTAGTFLDGKIHVGLNHYTGGRAGDPAAVSLSS 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITNRQ-IECGI 242 + + GRLKTGTP R+DG+TI + K ++Q D IP FSF+ + Q + C + Sbjct: 186 RLKELNLPQGRLKTGTPPRIDGRTIDFSKLDEQPGDLDPIPVFSFLGRAEQHPQQLPCWV 245 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T Sbjct: 246 THTNERTHDIIRSGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLTT 305 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + YPNGIST+LP ++Q + ++ GLE+ +I+RPGYAIEYDY +P+ L +LETK I G Sbjct: 306 NEFYPNGISTSLPFDVQLALVHSMRGLEQAHILRPGYAIEYDYFDPRALKSSLETKAIGG 365 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AGIN+ R + + D C R +Y+GV++DDL ++GV E Sbjct: 366 LFFAGQINGTTGYEEAAAQGLLAGINAGRYAQEKDAWCPRRDQAYLGVLVDDLVTRGVSE 425 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+SLR DNAD RLT IG +L + + R F + + L++ Sbjct: 426 PYRMFTSRAEYRLSLREDNADMRLTEIGRELSVVDDVRWDAFNRKRDAVSRETERLRTTW 485 Query: 483 LTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----------CPDARKFS 529 +T K L +T++ K + E L P S + + + Sbjct: 486 VTPKTLPADEATALLGKPIDHEYSLAELLRRPGVSYDGVCGLRGGECGPSEPLAEDELLL 545 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 + + E+++I Y Y RQ E + E +P DY+ + LS E+ +KL+ +P Sbjct: 546 AQIKEQIEIGIKYQGYIERQAGEIERNGANENTRLPDGIDYTEVRGLSFEVSQKLNQFRP 605 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKKNTV 618 + QAS+I GMTPAA++LL++++KK + Sbjct: 606 ETIGQASRISGMTPAAISLLMVHLKKRGL 634 >gi|167582846|ref|ZP_02375720.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia thailandensis TXDOH] Length = 657 Score = 804 bits (2077), Expect = 0.0, Method: Composition-based stats. Identities = 287/629 (45%), Positives = 388/629 (61%), Gaps = 15/629 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DA Sbjct: 6 EFDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D GIQFR+LN KGPAV R QADR LY+ A++R + +Q NL + Q V Sbjct: 66 LGGAMAAATDEGGIQFRILNSSKGPAVHATRAQADRVLYKQAIRRYLENQPNLWLFQQAV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + V Q R VVLT GTFL G IH+G GR GD + SL + Sbjct: 126 DDLMVEGDRVVGAVTQVGVRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSS 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITNR-QIECGI 242 + GRLKTGTP R+DG+TI + K E+Q D IP FSF+ + Q+ C + Sbjct: 186 RLKELKLPQGRLKTGTPPRIDGRTIDFSKLEEQPGDLDPIPVFSFLGRPEQHPEQLPCWV 245 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T Sbjct: 246 THTNERTHDIIRSGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLTT 305 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + YPNGIST+LP ++Q + ++ GLE+ +I+RPGYAIEYDY +P+ L +LETK I+G Sbjct: 306 NEFYPNGISTSLPFDVQLALVHSMRGLEQAHILRPGYAIEYDYFDPRALKSSLETKAING 365 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AGIN+ R + + + C R +Y+GV++DDL ++GV E Sbjct: 366 LFFAGQINGTTGYEEAAAQGLLAGINAGRHALEKEAWCPRRDQAYLGVLVDDLVTRGVSE 425 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F + + L++ Sbjct: 426 PYRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDDVRWDAFNRKRDAVSRETERLRTTW 485 Query: 483 LTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----------CPDARKFS 529 +T K L +T + K + E L P S + + + Sbjct: 486 VTPKTLPADEATELLGKPIDHEYSLAELLRRPGISYDGVCGLRGGECGPSEPLAEDALLL 545 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 + + E+++I Y Y RQ E + E +P DY+ + LS E+ +KL+ +P Sbjct: 546 AQIKEQIEIGIKYQGYIERQAGEIERNGANENTRLPDGIDYTEVRGLSFEVSQKLNQFRP 605 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKKNTV 618 + QAS+I G+TPAA++LL++++KK + Sbjct: 606 ETIGQASRISGVTPAAISLLMVHLKKRGL 634 >gi|329900649|ref|ZP_08272541.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Oxalobacteraceae bacterium IMCC9480] gi|327549425|gb|EGF33989.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Oxalobacteraceae bacterium IMCC9480] Length = 644 Score = 804 bits (2077), Expect = 0.0, Method: Composition-based stats. Identities = 291/627 (46%), Positives = 393/627 (62%), Gaps = 12/627 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +DVIV+GGGHAG EAA +A++G T L++H T+G MSCNP+IGG+GKGHLVRE Sbjct: 3 FPSEFDVIVVGGGHAGTEAALASARMGQKTLLLSHNIETLGQMSCNPSIGGIGKGHLVRE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DA+ G M D AGIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 63 VDAMGGAMAIATDEAGIQFRILNSSKGPAVRATRAQADRLLYKQAIRTRLENQPNLWLFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E + + V Q R VVLT GTFL G IH+G AGR GD P+ + Sbjct: 123 QAVDDLIVEGDRVVGAVTQIGIQFRSRAVVLTAGTFLDGKIHVGLNNYSAGRAGDPPAVT 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDK-ITNRQIE 239 L + GRLKTGTP RLDG+TI + ++Q D IP FS M + +Q+ Sbjct: 183 LSARLKELKMPQGRLKTGTPPRLDGRTIDFSVMQEQPGDLDPIPVFSVMGSVSMHPKQLP 242 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN TH II + S +Y+G I GPRYCPSIEDKI RF +++ HQIFLEPEG Sbjct: 243 CWITHTNESTHDIIRGGLDRSPMYTGVIAGIGPRYCPSIEDKIHRFADKSSHQIFLEPEG 302 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T+ YPNGIST+LP ++Q +R++ GLE+ +I+RPGYAIEYDY +P+ L +LETK Sbjct: 303 LTTNEYYPNGISTSLPFDVQLALVRSMVGLEQAHILRPGYAIEYDYFDPRGLKASLETKS 362 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQG++AG+N+A ++ D R +Y+GV++DDL ++G Sbjct: 363 IQGLFFAGQINGTTGYEEAAAQGMLAGLNAALQTQGRDAWTPGRDQAYLGVLVDDLVTQG 422 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 V EPYRMFTSRAEYR+SLR DNAD RLT IG +LGC+G+ + F + + L+ Sbjct: 423 VQEPYRMFTSRAEYRLSLREDNADMRLTEIGRELGCVGDLQWAAFEQKREAVARELERLR 482 Query: 480 SLVLTSK---NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI-------CPDARKFS 529 S ++ + S + K + + + L P+ S L + Sbjct: 483 STWVSPRVLAEAESERVLGKAIEREYSLADLLRRPNVSYAGLLGLTGMEGQSLAGPGVVD 542 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 +V E+++I+ YA Y RQ E + + E +P +FDY ++ ALS E+++KL +P Sbjct: 543 LIVREQVEIQLKYAGYIDRQAREIERHEQFEHLKLPVEFDYLAVSALSMEVRQKLHAHRP 602 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKKN 616 L QAS+I G+TPAA++LLL+++KK Sbjct: 603 ETLGQASRISGVTPAAMSLLLVHLKKG 629 >gi|261867021|ref|YP_003254943.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412353|gb|ACX81724.1| glucose-inhibited division protein A [Aggregatibacter actinomycetemcomitans D11S-1] Length = 629 Score = 804 bits (2077), Expect = 0.0, Method: Composition-based stats. Identities = 293/622 (47%), Positives = 390/622 (62%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +YDVIVIGGGHAG EAA A++G T L+TH T+G +SCNPAIGG+GKGHLV+E Sbjct: 3 YTETYDVIVIGGGHAGTEAALAPARMGLKTLLLTHNIDTLGQISCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDA+ GLM AD AGIQFR LN KGPAVR R Q DR LYR A++ + +Q NLD+ Q Sbjct: 63 IDAMGGLMATAADKAGIQFRTLNSSKGPAVRATRAQTDRVLYRQAVRIALENQPNLDIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 E E++ + +V + V+LT GTFL G IHIG GR GD S + Sbjct: 123 QEATDILIEQDRATGVVTKMGLKFHAKAVILTAGTFLAGKIHIGLENYTGGRAGDPASVT 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IEC 240 L + RLKTGTP R+D +TI +D KQ D L FSFM + Q I C Sbjct: 183 LAQRLRDLNLRVDRLKTGTPPRIDARTINFDVLAKQHGDAVLPVFSFMGSVSDHPQQIPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL Sbjct: 243 YITHTNEQTHDVIRNNLDRSPMYTGVIEGIGPRYCPSIEDKVMRFADRNSHQIYLEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 ++ +YPNGIST+LP ++Q + ++ GLEK I++PGYAIEYDY +P++L PTLETK I Sbjct: 303 TSNEIYPNGISTSLPFDVQMGIVNSMKGLEKARIVKPGYAIEYDYFDPRDLKPTLETKAI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 SGLF AGQINGTTGYEEAAAQGL+AGIN+ + D R +YIGV++DDL + G Sbjct: 363 SGLFFAGQINGTTGYEEAAAQGLLAGINAGLYVQEKDAWFPRRDQAYIGVLVDDLCTLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYR+FTSRAEYR+ LR DNAD RLTPI +LG I E R RF + ++ R L+S Sbjct: 423 KEPYRVFTSRAEYRLLLREDNADIRLTPIAHELGLIDEARWARFNQKMENIELERQRLRS 482 Query: 481 LVLTSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 + L ++ + + + + L P+ + + L S+ P +E++ Sbjct: 483 IWLHPRSEYLEEANKVLGSPLVREANGEDLLRRPEMNYEILTSLTPYQPAMEDKEAVEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I Y Y Q E ++ K E IP FDY+ + LSNE++ KL +P ++ QAS Sbjct: 543 EIAIKYQGYIEHQEEEIEKQKRHENTAIPAQFDYAKVSGLSNEVRAKLEQHRPVSIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA++++L+ +KK + Sbjct: 603 RISGITPAAISIILVNLKKQGM 624 >gi|77461958|ref|YP_351465.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas fluorescens Pf0-1] gi|123602667|sp|Q3K430|MNMG_PSEPF RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|77385961|gb|ABA77474.1| glucose inhibited division protein A [Pseudomonas fluorescens Pf0-1] Length = 632 Score = 804 bits (2076), Expect = 0.0, Method: Composition-based stats. Identities = 289/623 (46%), Positives = 386/623 (61%), Gaps = 7/623 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 ++VIVIGGGHAG EAA +A++GA T L+TH T+G+MSCNPAIGG+GK HLV+E Sbjct: 3 FPSRFEVIVIGGGHAGTEAALASARMGAKTLLLTHNVETLGAMSCNPAIGGIGKSHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 63 IDALGGAMAMATDLGGIQFRVLNSRKGPAVRATRAQADRILYKAAVREILENQPNLWIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 E+ + +V Q +VVLTTGTFL G+IHIG GR GD PS + Sbjct: 123 QAADDLIVEQEQVRGVVTQMGLRFFADSVVLTTGTFLGGLIHIGLQNFSGGRAGDPPSIA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIEC 240 L + + GRLKTGTP R+DGK++ + +Q D + SFM +K + RQ+ C Sbjct: 183 LAHRLRELPLRVGRLKTGTPPRIDGKSVDFSVMTEQPGDTPIPVMSFMGNKEQHPRQVSC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSG--DIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 IT TN TH II N+ S +YS +I+ GPRYCPSIEDKI RF ++ HQ+F+EPE Sbjct: 243 WITHTNARTHEIIAANLDRSPMYSAAGEIEGIGPRYCPSIEDKIHRFADKESHQVFIEPE 302 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL T +YPNGIST+LP ++Q Q +++I G+E +I+RPGYAIEYDY +P++L +LETK Sbjct: 303 GLTTHELYPNGISTSLPFDVQLQIVQSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETK 362 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I GLF AGQINGTTGYEEA AQGL+AG N+A ++ + C R ++YIGV++DDL + Sbjct: 363 VIGGLFFAGQINGTTGYEEAGAQGLLAGANAALRAKGKEAWCPRRDEAYIGVLVDDLITL 422 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYRMFTSRAEYR+ LR DNAD RLT G +LG + + R F K + L Sbjct: 423 GTQEPYRMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCKKRESIELEEQRL 482 Query: 479 KSLVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIER 535 KS + +I+ K LS P+ L + V E+ Sbjct: 483 KSTWVRPGTQQGDAIAEKFGTPLTHEYNLLNLLSRPEIDYAGLVEVT-GLGAEDPQVAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I++ YA Y RQ E ++ E +P D DY+++ LS E++ KL +P L QA Sbjct: 542 VEIKTKYAGYIDRQQDEIARLRASEDTKLPVDIDYTNISGLSKEIQSKLGATRPETLGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV 618 S+I G+TPAA++LL+I++KK Sbjct: 602 SRIPGVTPAAISLLMIHLKKRGA 624 >gi|147679251|ref|YP_001213466.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pelotomaculum thermopropionicum SI] gi|205375704|sp|A5CY45|MNMG_PELTS RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|146275348|dbj|BAF61097.1| NAD/FAD-utilizing enzyme apparently [Pelotomaculum thermopropionicum SI] Length = 631 Score = 804 bits (2076), Expect = 0.0, Method: Composition-based stats. Identities = 268/619 (43%), Positives = 383/619 (61%), Gaps = 4/619 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDV+V+G GHAGCEA AA++G T ++T + M CNPA+GG KGHLVRE+DA Sbjct: 8 TYDVVVVGAGHAGCEAGLAAARMGCRTLVLTLNMDNVALMPCNPAVGGPAKGHLVREVDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G +G D A IQ R+LN KGPAV R QAD+ Y+L M++ + Q LD+ Q V Sbjct: 68 LGGEIGLNTDRASIQMRLLNTGKGPAVHALRAQADKRYYQLCMKKVLECQPGLDLKQALV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 EK + ++ + VVLTTGT+L+G I IG L P G G PS +L + Sbjct: 128 EKIMVEKGKVRGVLTSTGARFEAGAVVLTTGTYLKGRIIIGDLSFPGGPNGQFPSVTLSD 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 GR KTGTPAR+D +I + K Q D++ FSF+++ Q+ C +T Sbjct: 188 CLADLGIKLGRFKTGTPARVDRNSIDFSKMSIQPGDKKTHNFSFISEIKEREQLPCWLTY 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETHRII EN+ + +Y+G IKS GPRYCPSIE K+VRF ++ HQ+F+EPEG NT Sbjct: 248 TTEETHRIIRENLHRAPLYTGVIKSQGPRYCPSIETKVVRFSDKPAHQVFIEPEGRNTTE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+ST+LPE++Q +RT+PGLE+V ++RPGYAIEYDY+ +L P+LETK I GLF Sbjct: 308 MYVQGMSTSLPEDVQLAMLRTLPGLERVEMMRPGYAIEYDYVVATQLKPSLETKAIPGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAAAQG++AGIN+A + +R+++YIGV+IDDL +K + EPY Sbjct: 368 TAGQINGTSGYEEAAAQGIMAGINAALYVKNREPFILNRSEAYIGVLIDDLVTKEIDEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL-KSLVL 483 RM TSRAEYR+ LR DNAD RLT G K+G + R ++ + + R L K++V Sbjct: 428 RMLTSRAEYRLLLRQDNADLRLTEKGYKIGLVSPERYAKYERKKKLVEEERQRLEKTMVA 487 Query: 484 TSKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + + G + + L P+ ++L I + V E+++I+ Sbjct: 488 VGDEVKRVLEAANSPGLPQQGISLAGLLRRPEIGYEHLLQIPGNHPDLPDEVREQVEIQI 547 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y +Q + ++ + E++ IP+D DY + LS E +EKL +++P ++ QAS+I G Sbjct: 548 KYEGYIKKQQAQVEKFRRLEEKKIPQDIDYGRVRGLSVEAREKLEMIRPASIGQASRIAG 607 Query: 601 MTPAALNLLLIYIKKNTVK 619 +TPA +++LLIY+++ + Sbjct: 608 VTPADVSVLLIYLERARRE 626 >gi|170718147|ref|YP_001785176.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Haemophilus somnus 2336] gi|189039343|sp|B0UWH3|MNMG_HAES2 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|168826276|gb|ACA31647.1| glucose inhibited division protein A [Haemophilus somnus 2336] Length = 629 Score = 804 bits (2076), Expect = 0.0, Method: Composition-based stats. Identities = 298/622 (47%), Positives = 395/622 (63%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +YDVIVIGGGHAG EAA A++ T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 YTENYDVIVIGGGHAGTEAALATARMKLKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDA+ GLM AD AGIQFR LN KGPAVR R QADR LYR ++ + +Q NLD+ Q Sbjct: 63 IDAMGGLMATAADKAGIQFRTLNSSKGPAVRATRAQADRVLYRQVVRIALENQPNLDIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 EV EK+ I+ + + R +VVLT GTFL G IHIG GR GD S + Sbjct: 123 QEVTDIILEKDSIAGVETKMGLKFRAKSVVLTAGTFLAGKIHIGLENYAGGRAGDPASVN 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIEC 240 L + RLKTGTP R+D +TI +D KQ+ DE+L FSFM + QI C Sbjct: 183 LAKKLRDLNLRVNRLKTGTPPRIDARTINFDILAKQYGDEKLPVFSFMGSVEQHPEQIPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH +I +N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL Sbjct: 243 YITHTNDQTHDVIRKNLDRSPMYTGVIEGIGPRYCPSIEDKVIRFSDRNSHQIYLEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 ++ VYPNGIST+LP ++Q + + ++ GLEK I++PGYAIEYDY +P++L PTLETK I Sbjct: 303 TSNEVYPNGISTSLPFDVQMKIVNSMKGLEKARIVKPGYAIEYDYFDPRDLKPTLETKAI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 SGLF AGQINGTTGYEEAAAQGL+AGIN+ + + R +YIGV++DDL + G Sbjct: 363 SGLFFAGQINGTTGYEEAAAQGLLAGINAGLFVQEKESWFPRRDQAYIGVLVDDLCTVGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYR+FTSRAEYR+ LR DNAD RLT I +LG I + R RF + ++ R L+S Sbjct: 423 KEPYRVFTSRAEYRLLLREDNADIRLTSIARELGLIDDIRWARFNQKMENIELERQRLRS 482 Query: 481 LVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 + L ++ + I + + L P+ + Q L ++ P +E++ Sbjct: 483 IWLHPRSEYLNEANEILKSPLVREVNGEDLLRRPEINYQILTALTPFKPAMEDKEAVEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I Y Y Q E + K E IP +FDY ++ LSNE+ KL +P ++ QAS Sbjct: 543 EIAIKYQGYIEHQQEEIERQKRHENTAIPANFDYKNISGLSNEVCAKLEQYRPISIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA+++LL+ +KK + Sbjct: 603 RISGITPAAISILLVNLKKQGM 624 >gi|312794883|ref|YP_004027805.1| glucose inhibited division protein A [Burkholderia rhizoxinica HKI 454] gi|312166658|emb|CBW73661.1| Glucose inhibited division protein A [Burkholderia rhizoxinica HKI 454] Length = 669 Score = 804 bits (2076), Expect = 0.0, Method: Composition-based stats. Identities = 295/639 (46%), Positives = 397/639 (62%), Gaps = 19/639 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVIV+GGGHAG EAA +A++GA T L+TH T+G MSCNP+IGG+GKGHLV+E+DA Sbjct: 6 EFDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D AGIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q V Sbjct: 66 LGGAMAVATDEAGIQFRILNSSKGPAVRATRAQADRILYKAAIRRRLENQSNLWLFQQSV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ V Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 126 DDLIIEGDRVAGAVTQVGIRFRSRAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSA 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQIECGI 242 + GRLKTGTP R+DG++I + K E+Q D IP FSF+ + RQ+ C I Sbjct: 186 RLRELKLPQGRLKTGTPPRIDGRSIDFLKLEEQPGDLDPIPVFSFLGCADQHPRQVSCWI 245 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPEGL T Sbjct: 246 THTNARTHEIIRSGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFATKESHQIFLEPEGLTT 305 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + YPNG+ST+LP ++Q IR++ GLE +I+RPGYAIEYDY +P+ L +LETK I+G Sbjct: 306 NEFYPNGVSTSLPFDVQLNLIRSMKGLEHAHILRPGYAIEYDYFDPRALKASLETKAIAG 365 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AGIN+ R + D R +Y+GV++DDL ++GV E Sbjct: 366 LFFAGQINGTTGYEEAAAQGLLAGINAGRFVQQRDAWVPRRDQAYLGVLVDDLVTRGVSE 425 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+SLR DNAD RLT IG +LG + + R + F++ + + + LKS+ Sbjct: 426 PYRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDDVRWEAFSRKREAVSRETARLKSIW 485 Query: 483 LTSKNLSST---SISFKQDGKTRTAYEFLSYPDFSIQNLFSI----------CPDARKFS 529 + K L + ++ K + + L P S + L ++ D Sbjct: 486 VNPKTLPAEDAVALLGKPIDHEYSLADLLRRPGVSYEGLMALQASRYAPPDVLVDDPGLF 545 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 V +++I Y Y RQ E + + E +P D DY + LS E+ +KL+ +P Sbjct: 546 EQVKYQIEIGIKYQGYIERQAGEIERNEAHENTRLPADLDYVQVRGLSFEVCQKLNHHRP 605 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKKN----TVKLNEIV 624 + QAS+I G+TPAA++LL++++KK T+K + + Sbjct: 606 ETIGQASRISGVTPAAISLLMVHLKKGLGRSTLKKSAVA 644 >gi|311032249|ref|ZP_07710339.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus sp. m3-13] Length = 629 Score = 804 bits (2076), Expect = 0.0, Method: Composition-based stats. Identities = 276/619 (44%), Positives = 396/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIG GHAG EA AA+ GA T ++T + M CNP++GG KG +VREIDA Sbjct: 7 SYDVIVIGAGHAGVEAGLAAARQGAKTLMVTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ LY+ M++ I ++EN+ ++QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFLYQHEMKKTIENEENITLLQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ Q ++ TVV+TTGTFLRG I +G+L+ +G PS +L Sbjct: 127 EKLIVEDGVCKGVITQTGAIYESKTVVITTGTFLRGKIILGELQYLSGPNNQQPSITLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ +I + KTE Q D+ FS+ T + Q+ C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVNSASIDYSKTEIQPGDDVPRAFSYETTEYITDQLPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETH++I +N+ S +YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSAETHQLIDDNLHRSPMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q + + TIPGLE V ++R GYAIEYD I P +L+PTLETK+I L+ Sbjct: 307 VYVQGLSTSLPEDVQRKILSTIPGLENVRMMRAGYAIEYDAIVPTQLWPTLETKRIQNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QG++AGIN+ R++ + + SR+D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGIMAGINAGRRALGEEDLILSRSDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT IG K+G I R +F + QE + L+S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEIGHKIGLISPERFAKFEEKKQEIEAEKERLQSIIIK 486 Query: 485 SK-----NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + S +DG A + L P+ + ++ + P ++ S V E+++I+ Sbjct: 487 PNVQVQTIIREAGGSELKDGIR--AADLLKRPEMTYNHIHQMVPADKEISPDVAEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + +K E + IP++ DY + L+NE ++KL ++P ++ QAS+I Sbjct: 545 VKYEGYIQKSLQQVDRLKKMENKKIPENIDYDDIHGLANEARQKLKEVRPLSVAQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+Y+++ + Sbjct: 605 GVNPADVSILLVYLEQGRI 623 >gi|157694474|ref|YP_001488936.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus pumilus SAFR-032] gi|166989734|sp|A8FJF9|MNMG_BACP2 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|157683232|gb|ABV64376.1| glucose-inhibited division protein A [Bacillus pumilus SAFR-032] Length = 628 Score = 804 bits (2076), Expect = 0.0, Method: Composition-based stats. Identities = 274/619 (44%), Positives = 391/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAG EAA +A+ GA T ++T + M CNP++GG KG +VREIDA Sbjct: 7 NYDVIVVGAGHAGVEAALASARQGAKTLVLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M R D IQ R+LN KGPAVR R QAD+ Y+ M++ + ++ NL ++QG V Sbjct: 67 LGGEMARNIDKTHIQMRMLNTGKGPAVRALRAQADKFQYQHEMKKTMENEPNLTMLQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + + +V Q + R +VVLTTGTFL+G I +G L +G PS L + Sbjct: 127 DHLIVKDDECKGVVTQTGANYRAKSVVLTTGTFLKGRIILGDLSYSSGPNNQQPSIKLSD 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 FD R KTGTP R++ +I + KTE Q D+ FS+ T + Q+ C +T Sbjct: 187 HLADLGFDLVRFKTGTPPRVNSHSIDYSKTEIQPGDDVPRAFSYETVEYITDQLPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+LETH+II EN+ S +YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSLETHQIIDENLHRSPMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q + + TIPGLE V ++R GYAIEYD I P +L+PTLETKKISGL+ Sbjct: 307 VYVQGLSTSLPEDVQQRMLSTIPGLENVQMMRAGYAIEYDAIVPTQLWPTLETKKISGLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QG++AGIN+ RK+ + + SR+D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGIMAGINAGRKALGKEEVILSRSDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL-----K 479 R+ TSRAEYR+ LR DNAD RLT +G +G I + R + F + + + L K Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTELGYHIGLISQERFQAFQQKKEAIEAEKKRLYSVIIK 486 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 T + + S S +DG A + + P+ + +++ + P S V E+++I+ Sbjct: 487 PTAETQEFIRSLGGSELKDGIR--ASDLMKRPEMNYESVVRLAPAETPLPSDVCEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + +++K E + IP DY ++ ++ E K+KL ++P ++ QAS+I Sbjct: 545 IKYEGYIEKSLQQVEKLKKMENKKIPDRIDYDAIKGIATEAKQKLKEVRPLSVAQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+Y+++ + Sbjct: 605 GVNPADISILLVYLEQGRI 623 >gi|292490169|ref|YP_003533064.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Erwinia amylovora CFBP1430] gi|292901171|ref|YP_003540540.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Erwinia amylovora ATCC 49946] gi|291201019|emb|CBJ48158.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme (glucose-inhibited division protein A) [Erwinia amylovora ATCC 49946] gi|291555611|emb|CBA24238.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Erwinia amylovora CFBP1430] Length = 629 Score = 804 bits (2076), Expect = 0.0, Method: Composition-based stats. Identities = 296/618 (47%), Positives = 390/618 (63%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIVIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLMG D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMGHAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLLVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGMDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +T+ + Q D L FSFM D + RQ+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTVDFSVLAPQHGDTPLPVFSFMGDVSQHPRQVPCYITY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH++I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHQVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMHGMENAKIVRPGYAIEYDFFDPRDLKPTLESKYIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+ R S + R +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAGRLSADKESWAPRRDQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R RF + ++ R L+ + + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEAGRELGLVDDARWARFNEKLESIELERQRLRDIWVH 486 Query: 485 SKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI-CPDARKFSSLVIERLQIES 540 K+ S+ K + + L P+ + Q L ++ + E+++I+ Sbjct: 487 PKSECVAEVNSVISAALTKEASGEDLLRRPEMTYQQLMTLKHFAPALADAQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E E ++P D DY + LSNE KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQEEIDRQLRNENTVLPVDLDYQQVSGLSNEAIAKLNDHKPGSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LLIY+KK + Sbjct: 607 ITPAAISILLIYLKKQGL 624 >gi|209515787|ref|ZP_03264650.1| glucose inhibited division protein A [Burkholderia sp. H160] gi|209503814|gb|EEA03807.1| glucose inhibited division protein A [Burkholderia sp. H160] Length = 652 Score = 804 bits (2076), Expect = 0.0, Method: Composition-based stats. Identities = 283/631 (44%), Positives = 386/631 (61%), Gaps = 15/631 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + +DVIV+GGGHAG EAA +A++G T L+TH T+G MSCNP+IGG+GKGHLV+ Sbjct: 2 LFPTEFDVIVVGGGHAGTEAALASARMGNKTLLLTHNIETLGQMSCNPSIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DAL G M D +GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Sbjct: 62 EVDALGGAMAAATDESGIQFRILNSSKGPAVRATRAQADRVLYKAAIRHRLENQPNLWLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + + V Q R VVLT GTFL G IH+G GR GD + Sbjct: 122 QQAVDDLMVEGDRVVGAVTQVGIRFRSRAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAV 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTD-KITNRQI 238 SL + GRLKTGTP R+DG+TI + + E+Q D +P FSF+ + RQ+ Sbjct: 182 SLSARLKELKLPQGRLKTGTPPRIDGRTIDYSQLEEQPGDLDPVPVFSFLGRVEQHPRQV 241 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C +T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQI+LEPE Sbjct: 242 PCWVTHTNQRTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIYLEPE 301 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL T+ YPNGIST+LP ++Q + +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 302 GLTTNEFYPNGISTSLPFDVQLELVRSMRGLEHAHILRPGYAIEYDYFDPRGLKASLETK 361 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I GLF AGQINGTTGYEEAAAQG +AGIN+ + C R +Y+GV++DDL ++ Sbjct: 362 VIGGLFFAGQINGTTGYEEAAAQGALAGINAGLFVQGKEAWCPRRDQAYLGVLVDDLVTR 421 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 GV EPYRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F + + L Sbjct: 422 GVSEPYRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDDVRWDAFNRKRDAVSRETQRL 481 Query: 479 KSLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI------CPDARKFS 529 +S + K L +T++ K + + L P S + + P+A Sbjct: 482 RSTWVNPKTLSADEATALLGKPIDHEYSLADLLRRPGVSYDGVCGLRNGACGAPEALAED 541 Query: 530 S----LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 + E+++I Y Y RQ E + + +E +P+ DY+ + LS E ++KL Sbjct: 542 PVLLAQIKEQIEIGVKYQGYIDRQADEIERNEAQENTRLPEGLDYTEVRGLSFEARQKLM 601 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYIKKN 616 +P + QAS+I G+TPAA++LL++++K+ Sbjct: 602 QFRPETIGQASRISGITPAAISLLMVHLKRG 632 >gi|152978019|ref|YP_001343648.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Actinobacillus succinogenes 130Z] gi|171472940|sp|A6VL66|MNMG_ACTSZ RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|150839742|gb|ABR73713.1| glucose inhibited division protein A [Actinobacillus succinogenes 130Z] Length = 629 Score = 803 bits (2075), Expect = 0.0, Method: Composition-based stats. Identities = 296/622 (47%), Positives = 389/622 (62%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +YDVIVIGGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 YTENYDVIVIGGGHAGTEAALAPARMGLKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDA+ GLM AD AGIQFR LN KGPAVR R QADR LYR A+++ + +Q NLD+ Q Sbjct: 63 IDAMGGLMATAADRAGIQFRTLNASKGPAVRATRAQADRVLYRQAVRQALENQPNLDIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 E E+ + + + R V+LT GTFL G IHIG GR GD S + Sbjct: 123 QEATDILLERERAAGVSTKMGLTFRAKAVILTAGTFLAGKIHIGLTNYEGGRAGDPASVT 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQIEC 240 L + RLKTGTP RLD +TI +D KQ+ D L FSFM + RQI C Sbjct: 183 LSHRLRDLGLRVDRLKTGTPPRLDARTINFDILAKQYGDAELPVFSFMGSTDQHPRQIPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDKI+RF +R HQI+LEPEGL Sbjct: 243 FITHTNEQTHDVIRNNLDRSPMYTGVIEGIGPRYCPSIEDKIMRFADRTSHQIYLEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 ++ VYPNGIST+LP ++Q + + ++ GLE I++PGYAIEYDY +P++L PTLETK I Sbjct: 303 TSNEVYPNGISTSLPFDVQMKIVNSMKGLENTRIVKPGYAIEYDYFDPRDLKPTLETKAI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQINGTTGYEEAAAQGL+AGIN+ + D R +Y+GV++DDL + G Sbjct: 363 GGLFFAGQINGTTGYEEAAAQGLLAGINAGLFVREKDAWFPRRDQAYVGVLVDDLCTLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYR+FTSRAEYR+ LR DNAD+RLTPI +LG I E R RF + + R LK Sbjct: 423 KEPYRVFTSRAEYRLLLREDNADSRLTPIAHELGLIDEARWARFNRKMDNITKERERLKQ 482 Query: 481 LVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 + + ++ I+ + + + L P+ S + L + E++ Sbjct: 483 IWIHPQSEHLNHINGLLNAPLTREASGEDLLRRPEVSYEKLTKTAAFSPALEDKQAAEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I Y Y Q E ++ K E LIP+ FDYS + LSNE++ KL +P ++ QA Sbjct: 543 EIAIKYQGYIEHQQEEIEKQKRHENTLIPERFDYSLVAGLSNEVRAKLEQHRPVSIGQAG 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA+++LL+ +KK + Sbjct: 603 RISGVTPAAISILLVNLKKQGM 624 >gi|153948674|ref|YP_001403128.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Yersinia pseudotuberculosis IP 31758] gi|166989740|sp|A7FPF0|MNMG_YERP3 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|152960169|gb|ABS47630.1| glucose-inhibited division protein A [Yersinia pseudotuberculosis IP 31758] Length = 629 Score = 803 bits (2075), Expect = 0.0, Method: Composition-based stats. Identities = 294/619 (47%), Positives = 397/619 (64%), Gaps = 5/619 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA Sbjct: 6 QFDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLM + D AGIQFR+LN KGPAVR R QADR LYRLA++ + +Q NL + Q +V Sbjct: 66 LGGLMAKATDLAGIQFRILNASKGPAVRATRAQADRVLYRLAVRTALENQPNLMIFQQQV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + V Q R VVLT GTFL G IHIG GR GD PS SL Sbjct: 126 EDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPSISLSQ 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGIT 243 + RLKTGTP R+D +TI + + Q D + FSF+ + + Q+ C IT Sbjct: 186 RLRELPLRVNRLKTGTPPRIDARTIDFSQLTPQLGDTPIPVFSFLGNAEQHPEQMACHIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 246 YTNEKTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNSHQIFLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q Q +R++ GLE IIRPGYAIEYD+ +P++L PTLE+K I GL Sbjct: 306 EIYPNGISTSLPFDVQMQIVRSMKGLENARIIRPGYAIEYDFFDPRDLKPTLESKYIQGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+ R +N+ D R ++Y+GV++DDL++ G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGLNAGRFANEEDGWSPRRDEAYLGVLVDDLSTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT G KLG + + R F++ +++ R L+ + + Sbjct: 426 YRMFTSRAEYRLMLREDNADLRLTETGRKLGLVDDIRWAHFSQKVEQIEKERQRLRDIWV 485 Query: 484 TSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIE 539 + + + I+ K E L P+ + L S+ ++++I+ Sbjct: 486 HPHSENVSEINALLKAPLSKEANGEELLRRPEIDYRLLTSLTSFGPALTDPQSADQVEIQ 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ E ++ E L+P D DY + LSNE+ KL+ KP ++ QAS+I Sbjct: 546 VKYEGYITRQQEEIEKQLRNENTLLPVDLDYQQVSGLSNEVIAKLNDHKPSSIGQASRIS 605 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+TPAA+++LL+++KK + Sbjct: 606 GITPAAISILLVWLKKQGL 624 >gi|238753970|ref|ZP_04615329.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Yersinia ruckeri ATCC 29473] gi|238707722|gb|EEQ00081.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Yersinia ruckeri ATCC 29473] Length = 629 Score = 803 bits (2075), Expect = 0.0, Method: Composition-based stats. Identities = 291/619 (47%), Positives = 393/619 (63%), Gaps = 5/619 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA Sbjct: 6 QFDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLM D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 66 LGGLMAIATDHAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQPV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + V Q R VVLT GTFL G IHIG GR GD PS SL Sbjct: 126 EDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPSISLSQ 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGIT 243 + RLKTGTP R+D +TI + + Q D+ + FSF+ + + Q+ C IT Sbjct: 186 RLRELPLRVNRLKTGTPPRIDARTIDFSQLAPQLGDDPVPVFSFLGNASQHPEQMACHIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 246 YTNEKTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q Q +R++ G+E IIRPGYAIEYD+ +P++L PTLE+K I GL Sbjct: 306 EIYPNGISTSLPFDVQMQIVRSMKGMENARIIRPGYAIEYDFFDPRDLKPTLESKYIQGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+ R +N + R ++Y+GV++DDL++ G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGLNAGRFANDDEGWFPRRDEAYLGVLVDDLSTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT +G KLG + + R ++ I++ R L+ +++ Sbjct: 426 YRMFTSRAEYRLMLREDNADLRLTEMGRKLGLVDDARWAHYSLKIEQIEKERQRLRDIMV 485 Query: 484 TSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIE 539 + I+ K E L P+ + L ++ ++++I+ Sbjct: 486 HPNSEKIQEINALLKAPLSKEANGEELLRRPEIDYRMLTALDKFGPALSDPQAADQVEIQ 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ E + E L+P D DYS + LSNE+ KL+ KP ++ QAS+I Sbjct: 546 VKYEGYIARQQEEIERQLRNENTLLPTDLDYSQVSGLSNEVTAKLNDHKPSSIGQASRIS 605 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+TPAA+++LL+++KK + Sbjct: 606 GVTPAAISILLVWLKKQGL 624 >gi|56965873|ref|YP_177607.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus clausii KSM-K16] gi|81170520|sp|Q5WAG4|MNMG_BACSK RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|56912119|dbj|BAD66647.1| glucose inhibited division protein A [Bacillus clausii KSM-K16] Length = 629 Score = 803 bits (2075), Expect = 0.0, Method: Composition-based stats. Identities = 274/618 (44%), Positives = 389/618 (62%), Gaps = 4/618 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIVIG GHAG EA AA++GA+T ++T + M CNP++GG KG +VREIDA Sbjct: 7 TFDVIVIGAGHAGVEAGLAAARMGANTLMLTLNLDAVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ M+R I QENL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFRYQQEMKRTIEEQENLLLRQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ + R VV+TTGT+LRG I +G+L +G PS L + Sbjct: 127 DRLIIEDGECRGVITNTGAQYRAKAVVVTTGTYLRGKIILGELSYESGPNNMQPSIKLSD 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R+ G TI + KTE Q D++ FS+ T K Q+ C +T Sbjct: 187 HLKELGFDLVRFKTGTPPRVHGNTIDYKKTEIQPGDDKPRAFSYETTKFITDQLPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ TH+II N+ S +YSG I+ GPRYCPSIEDKIVRF ++ HQIFLEPEG +T Sbjct: 247 TSENTHQIISANLGRSPMYSGMIEGTGPRYCPSIEDKIVRFSDKPRHQIFLEPEGRDTSE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q ++TIPGLE+V ++RPGYAIEYD I P +L+PTLETKKISGLF Sbjct: 307 VYVQGLSTSLPEDVQLSMLKTIPGLEEVRMMRPGYAIEYDAIVPTQLWPTLETKKISGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QG++AGIN+A+K+ + + R+++YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGIMAGINAAQKAFGKEGVILDRSEAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAE+R+ LR DNAD RLT G +LG I E R RF + + + +LV+ Sbjct: 427 RLLTSRAEFRLILRHDNADLRLTEKGYELGLISEERYSRFKAKQEAIEQEKQRISALVVK 486 Query: 485 SKNLSS---TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICP-DARKFSSLVIERLQIES 540 + + + + + A L P+ + + I P + V E+++I+ Sbjct: 487 PSDEVNQLLERLGSRSMTEALKATAVLKRPEMTYDHFLKIIPRPDVELDDEVYEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y +Q + + +K E++ IP+D DY ++ ++ E ++KL ++P ++ QAS++ G Sbjct: 547 KYEGYIEKQWQQIERLKKMEQKRIPEDLDYDAIQGIATEARQKLKQVRPLSVGQASRVSG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 + PA +++LL+Y+++ + Sbjct: 607 VNPADISILLVYLEQGRL 624 >gi|312174362|emb|CBX82615.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Erwinia amylovora ATCC BAA-2158] Length = 629 Score = 803 bits (2075), Expect = 0.0, Method: Composition-based stats. Identities = 296/618 (47%), Positives = 390/618 (63%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIVIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLMG D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMGHAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLLVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGMDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+D +T+ + Q D L FSFM D + RQ+ C IT Sbjct: 187 LRELPLRFGRLKTGTPPRIDARTVDFSVLAPQHGDTPLPVFSFMGDVSQHPRQVPCYITY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH++I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHQVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMHGMENAKIVRPGYAIEYDFFDPRDLKPTLESKYIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+ R S + R +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAGRLSADKESWAPRRDQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R RF + ++ R L+ + + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTEAGRELGLVDDARWARFNEKLESIEQERQRLRDIWVH 486 Query: 485 SKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI-CPDARKFSSLVIERLQIES 540 K+ S+ K + + L P+ + Q L ++ + E+++I+ Sbjct: 487 PKSECVAQVNSVISAALTKEASGEDLLRRPEMTYQQLMTLKHFAPALADAQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E E ++P D DY + LSNE KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQEEIDRQLRNENTVLPVDLDYQQVSGLSNEAIAKLNDHKPGSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LLIY+KK + Sbjct: 607 ITPAAISILLIYLKKQGL 624 >gi|238783013|ref|ZP_04627040.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Yersinia bercovieri ATCC 43970] gi|238716014|gb|EEQ07999.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Yersinia bercovieri ATCC 43970] Length = 629 Score = 803 bits (2074), Expect = 0.0, Method: Composition-based stats. Identities = 293/619 (47%), Positives = 397/619 (64%), Gaps = 5/619 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA Sbjct: 6 QFDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLM + D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 66 LGGLMAKATDLAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQPV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + + + R VVLT GTFL G IHIG GR GD PS SL Sbjct: 126 EDLIVENDRVVGAITKMGLKFRAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPSISLSQ 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGIT 243 + RLKTGTP R+D +TI + + Q D + FSF+ + + Q+ C IT Sbjct: 186 RLRELPLRVNRLKTGTPPRIDARTIDFSQLAPQLGDTPIPVFSFLGNAEQHPEQMACHIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 246 YTNEKTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNSHQIFLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q Q +R++ GLE I+RPGYAIEYD+ +P++L PTLE+K I GL Sbjct: 306 EIYPNGISTSLPFDVQMQIVRSMKGLENARIVRPGYAIEYDFFDPRDLKPTLESKYIHGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+ R +N D R ++Y+GV++DDL++ G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGLNAGRFANDEDGWSPRRDEAYLGVLVDDLSTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT +G KLG + + R F+K I++ R L+ +++ Sbjct: 426 YRMFTSRAEYRLMLREDNADLRLTEMGRKLGLVDDERWAHFSKKIEQIEKERQRLRDILV 485 Query: 484 TS--KNLSSTSISFK-QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIE 539 +N+S + K K E L P+ + L ++ ++++I+ Sbjct: 486 HPLSENVSEINELLKAPLSKEANGEELLRRPEIDYRLLMTLPSFGPALTDPQAADQVEIQ 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ E ++ E L+P D DY + LSNE+ KL+ KP ++ QAS+I Sbjct: 546 VKYEGYIARQQEEIEKQLRNENTLLPVDLDYQQVSGLSNEVIAKLNDHKPNSIGQASRIS 605 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+TPAA+++LL+++KK + Sbjct: 606 GITPAAISILLVWLKKQGL 624 >gi|222530700|ref|YP_002574582.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Caldicellulosiruptor bescii DSM 6725] gi|222457547|gb|ACM61809.1| glucose inhibited division protein A [Caldicellulosiruptor bescii DSM 6725] Length = 628 Score = 803 bits (2074), Expect = 0.0, Method: Composition-based stats. Identities = 272/614 (44%), Positives = 385/614 (62%), Gaps = 4/614 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDV V+G GHAG EAA +A+LG T + ++G+M CNP+IGG GKGHLVREIDA Sbjct: 7 EYDVAVVGAGHAGIEAALASARLGLKTIIFAINLDSVGNMPCNPSIGGTGKGHLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ ADA IQ R+LN KGPAV R Q DR YRL M+R + +QENLD+ Q EV Sbjct: 67 LGGEMGKAADATAIQVRILNRAKGPAVYSLRAQCDRSRYRLYMKRVLENQENLDIRQAEV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + + ++ VVL TGTFL G + +G+ +G G P+ L Sbjct: 127 CEVLVEDGRVKGVKITTGAVFLAKAVVLATGTFLGGRVIVGETVFDSGPDGMHPARYLTE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNRQIECGIT 243 + K + R KTGTPAR+ +++ + K + Q DE+ +PFSF D Q+ C +T Sbjct: 187 NLKKLGIEMMRFKTGTPARVHRRSLDFSKMQIQPGDEKPLPFSFENEDNFNIEQVPCYLT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 T ETHRII EN+ + +++G I GPRYCPSIEDKIVRF ++ HQ+F+EP G++TD Sbjct: 247 YTTEETHRIIRENLHRAPLFTGLISGVGPRYCPSIEDKIVRFADKPRHQVFIEPTGIDTD 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G+ST+LPE++Q + R++ GLE V I+RP YAIEYD INP +L PTL+ KKI GL Sbjct: 307 EMYVQGMSTSLPEDVQVKMYRSVIGLENVKIMRPAYAIEYDCINPLQLEPTLQFKKIKGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGT+GYEEAAAQG++AGIN+A + + R+ +YIGV+IDDL +KG EP Sbjct: 367 FSAGQINGTSGYEEAAAQGIIAGINAAMYVKGKEMLILDRSQAYIGVLIDDLVTKGTNEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT IG K+G I ++R ++F + + + +K+ ++ Sbjct: 427 YRIMTSRAEYRLILRQDNADLRLTEIGYKIGLISQQRYEKFLQKKKMIEDEINRVKNTII 486 Query: 484 TSKNLSSTSISFKQDGKTRT---AYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + + K T + L P+ S ++L I + V + ++IE Sbjct: 487 APSEKVNKLLLQKGSSPISTGVRLSDLLKRPELSYEDLKEIDINRPDLPWYVQDEVEIEI 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y +Q+ ++ K E + IP+ DY+ + LS E K+KLS +KP ++ QAS+I G Sbjct: 547 KYEGYIKKQLERIEQFKKLENKKIPEWVDYNKIAGLSTEAKQKLSQIKPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIK 614 ++PA +++LLI+++ Sbjct: 607 VSPADISVLLIWLE 620 >gi|89100946|ref|ZP_01173793.1| glucose-inhibited division protein A [Bacillus sp. NRRL B-14911] gi|89084355|gb|EAR63509.1| glucose-inhibited division protein A [Bacillus sp. NRRL B-14911] Length = 629 Score = 803 bits (2074), Expect = 0.0, Method: Composition-based stats. Identities = 274/619 (44%), Positives = 388/619 (62%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIG GHAG EA A +LGA T ++T + M CNP++GG KG +VREIDA Sbjct: 7 NYDVIVIGAGHAGVEAGLAAGRLGAKTLMVTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ R+LN KGPAVR R QAD+ Y+ M++ I ++ N+ ++QG V Sbjct: 67 LGGEMGKNIDKTHIQMRMLNTGKGPAVRALRAQADKFTYQHEMKKTIENEPNITLLQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + +V + TVV+TTGTFLRG I +G+LK +G PS L Sbjct: 127 EKLIVEDGVCKGVVTMTGAAYSAKTVVITTGTFLRGEIILGELKYSSGPNNQQPSIKLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ TI + KTE Q D+ FS+ T K Q+ C +T Sbjct: 187 HLQELGFDMVRFKTGTPPRVNSHTIDYSKTEIQPGDDVPRAFSYETTKYITDQLPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH +I +N+ S +YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TNETTHSLIDDNLHRSPMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q + +RTIPGLE V ++R GYAIEYD I P +L+PTLETKK+ L+ Sbjct: 307 VYVQGLSTSLPEDVQQKILRTIPGLENVQMMRAGYAIEYDSIVPTQLWPTLETKKVKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+ + + + SR+D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAGLNALGKEELILSRSDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT G K+G I + R RF + Q + L+S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTDAGHKIGLISDERYGRFTEKKQAIEAEKERLRSIIIK 486 Query: 485 S-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + + S +DG A + L P+ S +++ P V E+++I+ Sbjct: 487 PSAEVQEMIKNQGGSELKDGIR--ASDLLKRPEMSYEHIKLAAPADADLDFDVTEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + + +K E + +P++ DY ++ L++E ++KL ++P ++ QAS+I Sbjct: 545 LKYEGYIEKSLQQVERLKKMENKKVPENIDYDAINGLASEARQKLKEVRPLSIAQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+Y+++ V Sbjct: 605 GVNPADISILLVYLEQGRV 623 >gi|59713182|ref|YP_205958.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio fischeri ES114] gi|197333896|ref|YP_002157362.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio fischeri MJ11] gi|75353166|sp|Q5E1M6|MNMG_VIBF1 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|238690284|sp|B5FDA8|MNMG_VIBFM RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|59481283|gb|AAW87070.1| glucose-inhibited cell-division protein [Vibrio fischeri ES114] gi|197315386|gb|ACH64833.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio fischeri MJ11] Length = 629 Score = 803 bits (2074), Expect = 0.0, Method: Composition-based stats. Identities = 286/624 (45%), Positives = 392/624 (62%), Gaps = 6/624 (0%) Query: 1 MINR-SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLV 59 M + ++DVIVIGGGHAG EAA AA+ G +T L+TH T+G MSCNPAIGG+GKGHLV Sbjct: 1 MFYQDNFDVIVIGGGHAGTEAALAAARTGQNTLLLTHNIDTLGQMSCNPAIGGIGKGHLV 60 Query: 60 REIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDV 119 +E+DAL GLM + D +GIQFR LN KGPAVR R QADR LY+ ++ + +Q NL + Sbjct: 61 KEVDALGGLMAQAIDHSGIQFRTLNASKGPAVRATRAQADRALYKAYVRSVLENQPNLTL 120 Query: 120 IQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 Q V E + + V Q R +VVLT GTFL G IHIG GR GD S Sbjct: 121 FQQAVDDLIIENDKVMGAVTQMGLKFRAKSVVLTAGTFLGGQIHIGMENFSGGRAGDPSS 180 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-I 238 +L + F RLKTGTP R+D +++ + E Q D FSF+ + + Q + Sbjct: 181 ITLAQRLRERPFRIDRLKTGTPPRIDARSVDFSGLEAQPGDNPTPVFSFLGKREHHPQQV 240 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +++ HQIF+EPE Sbjct: 241 NCFITHTNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKDSHQIFIEPE 300 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL+T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 301 GLSTHELYPNGISTSLPFDVQLQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKSTYETK 360 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I GLF AGQINGTTGYEEAAAQGL+AG+N++ + + R ++Y+GV+IDDL++ Sbjct: 361 FIEGLFFAGQINGTTGYEEAAAQGLMAGLNASLFAQGKEGWSPRRDEAYMGVLIDDLSTL 420 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYRMFTSRAEYR+ LR DNAD RLT G LG + + R RF + ++ R L Sbjct: 421 GTKEPYRMFTSRAEYRLLLREDNADLRLTEQGRTLGLVDDVRWARFNEKVENMEQERQRL 480 Query: 479 KSLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIE 534 K + + K+ +I + + + L P+ + Q+L SI S E Sbjct: 481 KDIWINPKSEQVDQVNAILKTPIAREASGEDLLRRPEVNYQSLVSIDGFGPALEDSQASE 540 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ YA Y RQ E ++ E +P D DY + LSNE+ KLS KP + Sbjct: 541 QVEIQVKYAGYIQRQRDEIEKSLRHENTKLPFDLDYKEVKGLSNEVVAKLSDAKPETIGI 600 Query: 595 ASKIEGMTPAALNLLLIYIKKNTV 618 AS+I G+TPAA+++LL+++KK+ + Sbjct: 601 ASRISGITPAAISILLVHLKKHGL 624 >gi|296157546|ref|ZP_06840381.1| glucose inhibited division protein A [Burkholderia sp. Ch1-1] gi|295892318|gb|EFG72101.1| glucose inhibited division protein A [Burkholderia sp. Ch1-1] Length = 652 Score = 803 bits (2074), Expect = 0.0, Method: Composition-based stats. Identities = 283/636 (44%), Positives = 391/636 (61%), Gaps = 15/636 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + +DVIV+GGGHAG EAA +A++G +T L+TH T+G MSCNP+IGG+GKGHLV+ Sbjct: 2 LFPTEFDVIVVGGGHAGTEAALASARMGNTTLLLTHNIETLGQMSCNPSIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DAL G M D GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Sbjct: 62 EVDALGGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRLLYKQAIRHRLENQPNLWLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + + V Q R VVLT GTFL G IH+G GR GD + Sbjct: 122 QQAVDDLMVEGDRVVGAVTQVGIRFRGRAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAV 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTD-KITNRQI 238 SL + GRLKTGTP R+DG+TI + + E+Q D +P FSF+ + RQ+ Sbjct: 182 SLSARLKELKLPQGRLKTGTPPRIDGRTIDFSQLEEQPGDLDPVPVFSFLGRVEQHPRQV 241 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C +T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPE Sbjct: 242 PCWVTHTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPE 301 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL T+ YPNGIST+LP ++Q + +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 302 GLTTNEFYPNGISTSLPFDVQLELVRSMRGLEHAHILRPGYAIEYDYFDPRGLKASLETK 361 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I+GLF AGQINGTTGYEEAAAQGL+AGIN+ + C R +Y+GV++DDL ++ Sbjct: 362 VINGLFFAGQINGTTGYEEAAAQGLLAGINAGLYVQGKEAWCPRRDQAYLGVLVDDLVTR 421 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 GV EPYRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F++ + L Sbjct: 422 GVSEPYRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDDVRWDAFSRKRDAVSRETERL 481 Query: 479 KSLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI------CPDARKFS 529 ++ + K L +T++ K + + L P S + ++ P+ Sbjct: 482 RTTWVNPKTLSTDEATALLGKPIDHEYSLADLLRRPGVSYDGVCALRAGACAAPETLAED 541 Query: 530 S----LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 + E+++I Y Y RQ E + + E +P+ DY+ + LS E ++KL+ Sbjct: 542 DVLLGQIKEQIEIGIKYQGYIDRQAGEIERNEAHESTRLPEGLDYAEVRGLSFEARQKLT 601 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVKLN 621 +P + QAS+I G+TPAA++LL++++K+ + + Sbjct: 602 QFRPETIGQASRISGITPAAISLLMVHLKRGLGRRS 637 >gi|91777103|ref|YP_546859.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Methylobacillus flagellatus KT] gi|123380252|sp|Q1GXL9|MNMG_METFK RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|91711090|gb|ABE51018.1| glucose inhibited division protein A [Methylobacillus flagellatus KT] Length = 634 Score = 803 bits (2074), Expect = 0.0, Method: Composition-based stats. Identities = 285/624 (45%), Positives = 397/624 (63%), Gaps = 5/624 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +DVI++GGGHAG EAA +A++G T L+TH T+G MSCNP+IGG+GKGHLV+E Sbjct: 3 FSEKFDVIIVGGGHAGTEAALASARMGQKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DAL G M D GIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q Sbjct: 63 VDALGGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRVLYKAAIRRRLENQPNLWLFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E ++ +V Q VVLT GTFL G++H+G AGR GD P+ S Sbjct: 123 QAVDDIILEGERVAGVVTQLGLRFESKAVVLTAGTFLAGLVHVGLANYQAGRAGDPPAVS 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIEC 240 L + GRLKTGTP R+DG+TI + +Q D + FSF+ + Q+ C Sbjct: 183 LAARLREIGLPAGRLKTGTPPRIDGRTIDYSVMAEQPGDSPVPVFSFLGSAEQHPAQLPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH II + S +Y+G I+ GPRYCPS+EDKI RF +++ HQ+FLEPEGL Sbjct: 243 WITFTNEKTHDIIRSGLDRSPMYTGVIEGVGPRYCPSVEDKIHRFADKDSHQVFLEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T+ +YPNGIST+LP +IQ+Q +R+I GLE +I+RPGYAIEYDY +P+ L +LETK I Sbjct: 303 TTNEIYPNGISTSLPFDIQYQLVRSIKGLENAHILRPGYAIEYDYYDPRGLKSSLETKAI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQINGTTGYEEAAAQGL+AG N+A + + D +R +Y+GV++DDL ++GV Sbjct: 363 RGLFFAGQINGTTGYEEAAAQGLLAGANAALYAQEKDAWWPTRDQAYLGVLVDDLITRGV 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT G KLG + + R + F + + + L+ Sbjct: 423 SEPYRMFTSRAEYRLMLREDNADMRLTEAGRKLGLVDDVRWEAFQRKQEAIEREQQRLRR 482 Query: 481 LVLTSKNLSSTSIS---FKQDGKTRTAYEFLSYPDFSIQNLFSICPDAR-KFSSLVIERL 536 + +++ + K + + +E L P+ S + L S+ + V ++L Sbjct: 483 TFIHPQHVPQEQLQQVFGKVLEREYSMFELLRRPEVSYEALLSLPQAGEGEADPQVRQQL 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I + Y Y RQ E + +K E +P + DYS + LS E+++KL+ KP + QA Sbjct: 543 EIVAKYQGYIDRQAEEIERLKESEHYRLPLNMDYSEVHGLSIEVQQKLNKQKPETIGQAG 602 Query: 597 KIEGMTPAALNLLLIYIKKNTVKL 620 +I G+TPAA++LLL+++K+ + K Sbjct: 603 RISGVTPAAVSLLLVHLKRKSRKA 626 >gi|261410104|ref|YP_003246345.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Paenibacillus sp. Y412MC10] gi|261286567|gb|ACX68538.1| glucose inhibited division protein A [Paenibacillus sp. Y412MC10] Length = 628 Score = 803 bits (2074), Expect = 0.0, Method: Composition-based stats. Identities = 272/621 (43%), Positives = 385/621 (61%), Gaps = 6/621 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +YDVIV+G GHAGCEAA +A++GA T ++T + M CNP+IGG KGH+VRE Sbjct: 4 MGGTYDVIVVGAGHAGCEAALASARMGAETLMVTINLDMVAFMPCNPSIGGPAKGHVVRE 63 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G MGR D IQ R+LN KGPAV R QAD+ Y+ M+ + +E L + Q Sbjct: 64 IDALGGEMGRNIDKTFIQMRMLNTGKGPAVHALRAQADKFSYQHTMKETMEKEEKLTLRQ 123 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G V E + IV Q + R VVLTTGT+LRG + +G+L +G PS Sbjct: 124 GMVDQLIVEDGVCVGIVTQTGTEYRAKAVVLTTGTYLRGKVIMGELMYESGPNNQQPSVK 183 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L ++ + FD R KTGTP R+ TI + KTE Q DE+ FS+ T N Q+ C Sbjct: 184 LAHNLRELGFDLVRFKTGTPPRVHKDTIDFSKTEIQPGDEKPKFFSYETKSSDNEQLPCW 243 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T T+++TH+II +N+ + ++SG I+ GPRYCPSIEDKIVRF ++ HQIFLEPEG N Sbjct: 244 LTYTSVDTHKIINDNLHRAPMFSGVIEGTGPRYCPSIEDKIVRFADKPKHQIFLEPEGKN 303 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T Y G+ST++PE++Q +R+IPG+EKV ++R GYAIEYD + P +L+P+LETKK+ Sbjct: 304 TKEYYVQGLSTSMPEDVQLAVLRSIPGMEKVEMMRNGYAIEYDAMVPTQLWPSLETKKLP 363 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQINGT+GYEEAA QG++AGIN+ARK + + R+ YIGV+IDDL +KG Sbjct: 364 GLFTAGQINGTSGYEEAAGQGIMAGINAARKVQGKEPVILDRSQGYIGVLIDDLVTKGTN 423 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAEYR+ LR DNAD RLT IG +G I E R +F Q L+ Sbjct: 424 EPYRLLTSRAEYRLLLRHDNADLRLTEIGHDIGLISEERYAKFVLKKQLVEQEIERLRQT 483 Query: 482 VLTSKN----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 + L + + DG L P+ + + S+ P + + E+++ Sbjct: 484 KVKPVEVNAMLEAAGSAPIVDGSNML--TILRRPEITFAMVESLSPSPYELDEEMKEQVE 541 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ YA Y +Q+ ++++ EK+ IP+D Y + L+ E ++KL+ ++P ++ QAS+ Sbjct: 542 IQIKYAGYIEKQLGHVEKLQKMEKKRIPEDIVYDEINGLAMEARQKLNKIRPISIGQASR 601 Query: 598 IEGMTPAALNLLLIYIKKNTV 618 I G+TPA +++LL+Y++ Sbjct: 602 IAGVTPADISILLVYLEHYNR 622 >gi|254505046|ref|ZP_05117197.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Labrenzia alexandrii DFL-11] gi|222441117|gb|EEE47796.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Labrenzia alexandrii DFL-11] Length = 643 Score = 803 bits (2074), Expect = 0.0, Method: Composition-based stats. Identities = 357/618 (57%), Positives = 458/618 (74%), Gaps = 3/618 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 S+DV+VIGGGHAGCEAAA +A++GA TAL+THK TIG MSCNPAIGGLGKGHLVREIDA Sbjct: 23 SFDVVVIGGGHAGCEAAAASARMGAKTALVTHKFETIGVMSCNPAIGGLGKGHLVREIDA 82 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRVAD GIQFR+LN +KGPAVRGPR QADR+LYR AMQREI + ENL V++GE Sbjct: 83 LDGLMGRVADQGGIQFRMLNRRKGPAVRGPRAQADRKLYREAMQREIAAVENLTVVEGEA 142 Query: 125 AGFNTEKNI---ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 ++ IV+ +I C VVLT+GTFLRG+IHIG KIPAGR G++P+ Sbjct: 143 EQLRFSGADARSVTGIVLASGQVIDCGAVVLTSGTFLRGLIHIGDRKIPAGRSGEAPAMG 202 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L +S + FD GRLKTGTPARLDG+TI WD+ E+Q DE IPFS +TDKI+ QI C Sbjct: 203 LSHSLEQIGFDLGRLKTGTPARLDGRTIHWDRLEEQPGDEEPIPFSTLTDKISIPQIPCH 262 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 ITRT ETH+II +N+ SA+YSG+IK GPRYCPSIEDKIVRFG+R+GHQIFLEPEGL+ Sbjct: 263 ITRTTPETHQIIRDNLDRSAMYSGEIKGRGPRYCPSIEDKIVRFGDRDGHQIFLEPEGLD 322 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 VYPNGIST+LPE+ Q F+RTIPGLE V +I+PGYAIEYD+++P+EL TLE K+ + Sbjct: 323 DHTVYPNGISTSLPEDAQIAFLRTIPGLENVEVIQPGYAIEYDHVDPRELRATLEAKRCA 382 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GL+LAGQINGTTGYEEA AQGLVAG+N+A K R+ YIGVMIDDL ++G+ Sbjct: 383 GLYLAGQINGTTGYEEAGAQGLVAGLNAALKVADKAPFIVDRSQGYIGVMIDDLITRGIT 442 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+SLR DNAD RLTP+G+++GC+ + R+ + +++ R LL+SL Sbjct: 443 EPYRMFTSRAEYRLSLRADNADQRLTPLGIEIGCVSDDRRAAYEAKMEKILAARDLLQSL 502 Query: 482 VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +T + + QDG R+A++ LSYP + L + P+ V+E++ ++ Sbjct: 503 TVTPNEATKKGLPVNQDGVRRSAFDLLSYPKVTFDGLQMVWPELGHMDPAVVEQVTTDAL 562 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ + + +K +E IP DFDY ++ LSNE+K+KL+ ++P L QAS+++GM Sbjct: 563 YAVYLERQTADIEALKRDEALGIPDDFDYEAIVGLSNEVKQKLADIRPATLGQASRMDGM 622 Query: 602 TPAALNLLLIYIKKNTVK 619 TPAAL L+L ++K+ + + Sbjct: 623 TPAALTLILSHLKRQSQR 640 >gi|51598260|ref|YP_072451.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Yersinia pseudotuberculosis IP 32953] gi|108810165|ref|YP_654081.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Yersinia pestis Antiqua] gi|108814147|ref|YP_649914.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Yersinia pestis Nepal516] gi|145601143|ref|YP_001165219.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Yersinia pestis Pestoides F] gi|150260936|ref|ZP_01917664.1| glucose inhibited division protein A [Yersinia pestis CA88-4125] gi|161484718|ref|NP_671435.2| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Yersinia pestis KIM 10] gi|161511281|ref|NP_995299.2| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Yersinia pestis biovar Microtus str. 91001] gi|162421890|ref|YP_001608482.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Yersinia pestis Angola] gi|165926144|ref|ZP_02221976.1| glucose-inhibited division protein A [Yersinia pestis biovar Orientalis str. F1991016] gi|165939987|ref|ZP_02228524.1| glucose-inhibited division protein A [Yersinia pestis biovar Orientalis str. IP275] gi|166009678|ref|ZP_02230576.1| glucose-inhibited division protein A [Yersinia pestis biovar Antiqua str. E1979001] gi|166213177|ref|ZP_02239212.1| glucose-inhibited division protein A [Yersinia pestis biovar Antiqua str. B42003004] gi|167401658|ref|ZP_02307152.1| glucose-inhibited division protein A [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167422861|ref|ZP_02314614.1| glucose-inhibited division protein A [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425519|ref|ZP_02317272.1| glucose-inhibited division protein A [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167468637|ref|ZP_02333341.1| glucose-inhibited division protein A [Yersinia pestis FV-1] gi|170026421|ref|YP_001722926.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Yersinia pseudotuberculosis YPIII] gi|186897459|ref|YP_001874571.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Yersinia pseudotuberculosis PB1/+] gi|218931106|ref|YP_002348981.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Yersinia pestis CO92] gi|229839841|ref|ZP_04460000.1| glucose-inhibited cell-division protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229841925|ref|ZP_04462081.1| glucose-inhibited cell-division protein [Yersinia pestis biovar Orientalis str. India 195] gi|229896802|ref|ZP_04511965.1| glucose-inhibited cell-division protein [Yersinia pestis Pestoides A] gi|229904691|ref|ZP_04519802.1| glucose-inhibited cell-division protein [Yersinia pestis Nepal516] gi|270488401|ref|ZP_06205475.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Yersinia pestis KIM D27] gi|294505652|ref|YP_003569714.1| glucose-inhibited division protein A [Yersinia pestis Z176003] gi|21263668|sp|Q8Z9R8|MNMG_YERPE RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|81170592|sp|Q663P9|MNMG_YERPS RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|123072470|sp|Q1C086|MNMG_YERPA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|123246082|sp|Q1CCG6|MNMG_YERPN RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|166224339|sp|A4TSI4|MNMG_YERPP RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|205831572|sp|B1JR32|MNMG_YERPY RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|238687314|sp|A9R5U9|MNMG_YERPG RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|238691428|sp|B2K7J2|MNMG_YERPB RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|51591542|emb|CAH23214.1| glucose inhibited division protein A [Yersinia pseudotuberculosis IP 32953] gi|108777795|gb|ABG20314.1| glucose inhibited division protein A [Yersinia pestis Nepal516] gi|108782078|gb|ABG16136.1| glucose inhibited division protein A [Yersinia pestis Antiqua] gi|115349717|emb|CAL22698.1| glucose inhibited division protein A [Yersinia pestis CO92] gi|145212839|gb|ABP42246.1| glucose inhibited division protein A [Yersinia pestis Pestoides F] gi|149290344|gb|EDM40421.1| glucose inhibited division protein A [Yersinia pestis CA88-4125] gi|162354705|gb|ABX88653.1| glucose-inhibited division protein A [Yersinia pestis Angola] gi|165912113|gb|EDR30753.1| glucose-inhibited division protein A [Yersinia pestis biovar Orientalis str. IP275] gi|165922004|gb|EDR39181.1| glucose-inhibited division protein A [Yersinia pestis biovar Orientalis str. F1991016] gi|165991600|gb|EDR43901.1| glucose-inhibited division protein A [Yersinia pestis biovar Antiqua str. E1979001] gi|166205475|gb|EDR49955.1| glucose-inhibited division protein A [Yersinia pestis biovar Antiqua str. B42003004] gi|166958253|gb|EDR55274.1| glucose-inhibited division protein A [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049040|gb|EDR60448.1| glucose-inhibited division protein A [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055533|gb|EDR65326.1| glucose-inhibited division protein A [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169752955|gb|ACA70473.1| glucose inhibited division protein A [Yersinia pseudotuberculosis YPIII] gi|186700485|gb|ACC91114.1| glucose inhibited division protein A [Yersinia pseudotuberculosis PB1/+] gi|229678809|gb|EEO74914.1| glucose-inhibited cell-division protein [Yersinia pestis Nepal516] gi|229691264|gb|EEO83317.1| glucose-inhibited cell-division protein [Yersinia pestis biovar Orientalis str. India 195] gi|229696207|gb|EEO86254.1| glucose-inhibited cell-division protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700240|gb|EEO88276.1| glucose-inhibited cell-division protein [Yersinia pestis Pestoides A] gi|262363817|gb|ACY60538.1| glucose-inhibited division protein A [Yersinia pestis D106004] gi|262367753|gb|ACY64310.1| glucose-inhibited division protein A [Yersinia pestis D182038] gi|270336905|gb|EFA47682.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Yersinia pestis KIM D27] gi|294356111|gb|ADE66452.1| glucose-inhibited division protein A [Yersinia pestis Z176003] gi|320017466|gb|ADW01038.1| glucose-inhibited cell-division protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 629 Score = 803 bits (2074), Expect = 0.0, Method: Composition-based stats. Identities = 294/619 (47%), Positives = 396/619 (63%), Gaps = 5/619 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA Sbjct: 6 QFDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLM + D AGIQFR+LN KGPAVR R QADR LYRLA++ + +Q NL + Q V Sbjct: 66 LGGLMAKATDLAGIQFRILNASKGPAVRATRAQADRVLYRLAVRTALENQPNLMIFQQPV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + V Q R VVLT GTFL G IHIG GR GD PS SL Sbjct: 126 EDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPSISLSQ 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGIT 243 + RLKTGTP R+D +TI + + Q D + FSF+ + + Q+ C IT Sbjct: 186 RLRELPLRVNRLKTGTPPRIDARTIDFSQLTPQLGDTPIPVFSFLGNAEQHPEQMACHIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 246 YTNEKTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNSHQIFLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q Q +R++ GLE IIRPGYAIEYD+ +P++L PTLE+K I GL Sbjct: 306 EIYPNGISTSLPFDVQMQIVRSMKGLENARIIRPGYAIEYDFFDPRDLKPTLESKYIQGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+ R +N+ D R ++Y+GV++DDL++ G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGLNAGRFANEEDGWSPRRDEAYLGVLVDDLSTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT G KLG + + R F++ +++ R L+ + + Sbjct: 426 YRMFTSRAEYRLMLREDNADLRLTETGRKLGLVDDIRWAHFSQKVEQIEKERQRLRDIWV 485 Query: 484 TSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIE 539 + + + I+ K E L P+ + L S+ ++++I+ Sbjct: 486 HPHSENVSEINALLKAPLSKEANGEELLRRPEIDYRLLTSLTSFGPALTDPQSADQVEIQ 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ E ++ E L+P D DY + LSNE+ KL+ KP ++ QAS+I Sbjct: 546 VKYEGYITRQQEEIEKQLRNENTLLPVDLDYQQVSGLSNEVIAKLNDHKPSSIGQASRIS 605 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+TPAA+++LL+++KK + Sbjct: 606 GITPAAISILLVWLKKQGL 624 >gi|261491714|ref|ZP_05988294.1| glucose inhibited cell division protein A [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261495536|ref|ZP_05991983.1| glucose inhibited cell division protein A [Mannheimia haemolytica serotype A2 str. OVINE] gi|261308870|gb|EEY10126.1| glucose inhibited cell division protein A [Mannheimia haemolytica serotype A2 str. OVINE] gi|261312553|gb|EEY13676.1| glucose inhibited cell division protein A [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 630 Score = 803 bits (2074), Expect = 0.0, Method: Composition-based stats. Identities = 299/623 (47%), Positives = 388/623 (62%), Gaps = 5/623 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + N+ YDVIV+GGGHAG EAA A++G T ++TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 IYNQIYDVIVVGGGHAGTEAALAPARMGLKTLILTHNVDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDA+ GLM + D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Sbjct: 62 EIDAMGGLMAKATDVAGIQFRTLNNSKGPAVRATRAQADRVLYRNAVRTALENQPNLDIF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q EV E N V + + VVLT GTFL G IHIG GR GD + Sbjct: 122 QQEVVDILVENNRAVGAVTKMGLTFKARAVVLTAGTFLAGKIHIGLDNYAGGRAGDPAAT 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 L + + RLKTGTP RLD +TI +D KQ DE L FSFM D + RQI Sbjct: 182 MLADRLRDLNLRVDRLKTGTPPRLDARTINFDVLAKQHGDEVLPVFSFMGDVSQHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I ++ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEG Sbjct: 242 CYITHTNDQTHDLIRNSLDRSPMYTGIIEGVGPRYCPSIEDKVMRFADRNSHQIYLEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 LNT VYPNGIST+LP ++Q + ++ GLE II+PGYAIEYDY +P++L PTLETK Sbjct: 302 LNTIEVYPNGISTSLPFDVQMGIVNSMKGLENTRIIKPGYAIEYDYFDPRDLKPTLETKA 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEA AQGL+AGIN A + + +R +Y GV++DDL + G Sbjct: 362 IDGLFFAGQINGTTGYEEAGAQGLLAGINVALQVQGKEAWYPTRDQAYTGVLVDDLCTLG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYR+FTSRAEYR+ LR DNAD RLTP +LG I E R RF + ++ R+ LK Sbjct: 422 TKEPYRVFTSRAEYRLLLREDNADIRLTPKAHELGLIDEARWVRFNQKMEAIEQERARLK 481 Query: 480 SLVLT---SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIER 535 S ++ + + + + P+ S + L I A E+ Sbjct: 482 STWAHLQMPNLDELNALLANPLAREASGEDLIRRPEMSYEKLTQIALFAPAIEDKQAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I Y Y Q E + K E LIP +FDY + +LSNE++ KL +P ++ QA Sbjct: 542 VEIAIKYQGYIEHQYNEIERHKRHENTLIPVEFDYDKVESLSNEVRAKLMQHRPVSIGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV 618 S+I G+TPAA+++LL+ +KK + Sbjct: 602 SRISGITPAAISILLVNLKKQGM 624 >gi|229530212|ref|ZP_04419601.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae 12129(1)] gi|229332345|gb|EEN97832.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae 12129(1)] Length = 631 Score = 803 bits (2074), Expect = 0.0, Method: Composition-based stats. Identities = 282/630 (44%), Positives = 387/630 (61%), Gaps = 6/630 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA AA+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHETFDVIVVGGGHAGTEAALAAARTGQRTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D AGIQFR LN KGPAVR R QADR LY+ M+ + + NL + Sbjct: 62 EVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYMRNVLENTPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + I +V Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQAVDDVIVEHDHIRGVVTQMGLKFHAKAVVLTVGTFLGGKIHIGLENYAGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D ++ + E Q D FSFM + + RQI Sbjct: 182 ALAHRLRELPFRVDRLKTGTPPRIDANSVDFSVLEAQHGDNPTPVFSFMGKREHHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +++ HQIF+EPEG Sbjct: 242 CYITHTNERTHDVIRANLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADKDSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTTELYPNGISTSLPFDVQMQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKY 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 IHGLFFAGQINGTTGYEEAAAQGLMAGLNASLYSQDKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG + + R RF + I R L+ Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLVDDARWARFNQKIDNMAKERQRLQ 481 Query: 480 SLVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIER 535 + ++ ++ + + + L P+ + + L ++ A + E+ Sbjct: 482 ETWMNPNSVGVEQLNTLLKTPMSREASGEDLLRRPEMTYELLTTLPAFAPALEDAEAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y RQ E ++ E +P + DY + LSNE+ KL+ KP + A Sbjct: 542 VEIQVKYDGYIQRQQDEIEKSLRHEHTKLPAELDYKQVKGLSNEVVLKLNAAKPETIGIA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV-KLNEIV 624 S+I G+TPAA+++LL+++KK+ + K E Sbjct: 602 SRISGITPAAISILLVHLKKHGMLKKGEAA 631 >gi|312623583|ref|YP_004025196.1| glucose inhibited division protein a [Caldicellulosiruptor kronotskyensis 2002] gi|312204050|gb|ADQ47377.1| glucose inhibited division protein A [Caldicellulosiruptor kronotskyensis 2002] Length = 628 Score = 803 bits (2074), Expect = 0.0, Method: Composition-based stats. Identities = 273/614 (44%), Positives = 385/614 (62%), Gaps = 4/614 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDV V+G GHAG EAA +A+LG T + ++G+M CNP+IGG GKGHLVREIDA Sbjct: 7 EYDVAVVGAGHAGIEAALASARLGLKTIIFAINLDSVGNMPCNPSIGGTGKGHLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ ADA IQ R+LN KGPAV R Q DR YRL M+R + +QENLDV Q EV Sbjct: 67 LGGEMGKAADATAIQVRILNRAKGPAVYSLRAQCDRSRYRLYMKRVLENQENLDVRQAEV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + + ++ VVL TGTFL G + IG+ +G G P+ L Sbjct: 127 CEVLVEDGRVKGVKITTGAVFLAKAVVLATGTFLGGRVIIGETVFDSGPDGMHPARYLTE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNRQIECGIT 243 + K + R KTGTPAR+ +++ + K + Q DE+ +PFSF D Q+ C +T Sbjct: 187 NLKKLGIEMMRFKTGTPARVHRRSLDFSKMQIQPGDEKPLPFSFENEDNFIIEQVPCYLT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 T ETHRII EN+ + +++G I GPRYCPSIEDKIVRF ++ HQ+F+EP G++TD Sbjct: 247 YTTEETHRIIRENLHRAPLFTGLISGVGPRYCPSIEDKIVRFADKPRHQVFIEPTGIDTD 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G+ST+LPE++Q + R++ GLE V I+RP YAIEYD INP +L PTL+ KKI GL Sbjct: 307 EMYVQGMSTSLPEDVQVKMYRSVIGLENVKIMRPAYAIEYDCINPLQLEPTLQFKKIKGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGT+GYEEAAAQG++AGIN+A + + R+ +YIGV+IDDL +KG EP Sbjct: 367 FSAGQINGTSGYEEAAAQGIIAGINAAMYVKGKEMLILDRSQAYIGVLIDDLVTKGTNEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT IG K+G I ++R ++F + + + +K+ ++ Sbjct: 427 YRIMTSRAEYRLILRQDNADLRLTEIGYKIGLISQQRYEKFLQKKKMIEDEINRVKNTII 486 Query: 484 TSKNLSSTSISFKQDGKTRT---AYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + + K T + L P+ S ++L I + V + ++IE Sbjct: 487 APSEKVNKLLLQKGSSPISTGVRLSDLLKRPELSYEDLKEIDINRPDLPWYVQDEVEIEI 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y +Q+ ++ K E + IP+ DY+ + LS E K+KLS ++P ++ QAS+I G Sbjct: 547 KYEGYIKKQLERIEQFKKLENKKIPEWVDYNKIAGLSTEAKQKLSQIRPASIGQASRISG 606 Query: 601 MTPAALNLLLIYIK 614 ++PA +++LLI+++ Sbjct: 607 VSPADISVLLIWLE 620 >gi|15967090|ref|NP_387443.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Sinorhizobium meliloti 1021] gi|307302552|ref|ZP_07582309.1| glucose inhibited division protein A [Sinorhizobium meliloti BL225C] gi|21263672|sp|Q92KW2|MNMG_RHIME RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|15076363|emb|CAC47916.1| Probable glucose inhibited division protein A [Sinorhizobium meliloti 1021] gi|306903222|gb|EFN33812.1| glucose inhibited division protein A [Sinorhizobium meliloti BL225C] Length = 623 Score = 803 bits (2074), Expect = 0.0, Method: Composition-based stats. Identities = 382/619 (61%), Positives = 473/619 (76%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDVIVIGGGHAGCEAA+ +A+LGA T LITHK TIG MSCNPAIGGLGKGHLVREIDA Sbjct: 3 DYDVIVIGGGHAGCEAASASARLGARTVLITHKMDTIGVMSCNPAIGGLGKGHLVREIDA 62 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRVADAAGIQFR+LN +KGPAVRGPRTQADR+LYR AMQREI ENL VI+G+ Sbjct: 63 LDGLMGRVADAAGIQFRLLNRRKGPAVRGPRTQADRKLYREAMQREISGIENLSVIEGDA 122 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 TE ++ M+D + R + VVLTTGTFL+G+IHIG+ KIPAGR+G+ PS L Sbjct: 123 FDLLTEDGVVCGTAMKDGRIFRAAAVVLTTGTFLKGLIHIGQRKIPAGRVGEEPSLGLSG 182 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + +F GRLKTGTPARLDG+TI WD+ +Q DE +PFSFMTD I NRQI+CG+TR Sbjct: 183 TLRRFGLQLGRLKTGTPARLDGRTIDWDRVGRQGPDENPVPFSFMTDAIINRQIDCGVTR 242 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T TH+II +NI SA+YSG I+ GPRYCPSIEDKIVRFGER+GHQIFLEPEGL+ D Sbjct: 243 TTDATHKIIADNIHQSAMYSGQIEGVGPRYCPSIEDKIVRFGERDGHQIFLEPEGLDDDT 302 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LPE++Q FIRTIPGLE+V I++PGYAIEYD+++P+EL +L +K+ GLF Sbjct: 303 VYPNGISTSLPEDVQDAFIRTIPGLEQVKILQPGYAIEYDHVDPRELELSLGVRKMPGLF 362 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEA AQGLVAG+N+A +S FSRTDSYIGVMIDDLTS+G+ EPY Sbjct: 363 LAGQINGTTGYEEAGAQGLVAGLNAALRSIGRAPHFFSRTDSYIGVMIDDLTSRGITEPY 422 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+SLR DNAD RLTP G+ LGC+G+ R++RF + Y R+LL+SL +T Sbjct: 423 RMFTSRAEYRLSLRADNADMRLTPAGITLGCVGDARRQRFEAWKHSYETGRTLLQSLSVT 482 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + QDG+ RTA++ LSYPD SI L + P+ + + V+E L+I+++YA Sbjct: 483 PSEGKRFGLKLNQDGQRRTAFDILSYPDQSIAALKPLWPELQTIPAGVVEALEIDAAYAV 542 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + ++ +E IP DFDY LP LSNELK+KL+ KP NL QA K++G+TPA Sbjct: 543 YMERQATDIAGVRRDENTSIPDDFDYEVLPGLSNELKQKLAQHKPRNLAQAMKVDGVTPA 602 Query: 605 ALNLLLIYIKKNTVKLNEI 623 A++L+L ++++ + + Sbjct: 603 AISLILSWLRRQVRQAQRV 621 >gi|307316117|ref|ZP_07595561.1| glucose inhibited division protein A [Sinorhizobium meliloti AK83] gi|306897957|gb|EFN28699.1| glucose inhibited division protein A [Sinorhizobium meliloti AK83] Length = 623 Score = 803 bits (2073), Expect = 0.0, Method: Composition-based stats. Identities = 381/619 (61%), Positives = 473/619 (76%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDVIVIGGGHAGCEAA+ +A+LGA T L+THK TIG MSCNPAIGGLGKGHLVREIDA Sbjct: 3 DYDVIVIGGGHAGCEAASASARLGARTVLMTHKMDTIGVMSCNPAIGGLGKGHLVREIDA 62 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRVADAAGIQFR+LN +KGPAVRGPRTQADR+LYR AMQREI ENL VI+G+ Sbjct: 63 LDGLMGRVADAAGIQFRLLNRRKGPAVRGPRTQADRKLYREAMQREISGIENLSVIEGDA 122 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 TE ++ M+D + R + VVLTTGTFL+G+IHIG+ KIPAGR+G+ PS L Sbjct: 123 FDLLTEDGVVCGTAMKDGRIFRAAAVVLTTGTFLKGLIHIGQRKIPAGRVGEEPSLGLSG 182 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + +F GRLKTGTPARLDG+TI WD+ +Q DE +PFSFMTD I NRQI+CG+TR Sbjct: 183 TLRRFGLQLGRLKTGTPARLDGRTIDWDRVGRQGPDENPVPFSFMTDAIINRQIDCGVTR 242 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T TH+II +NI SA+YSG I+ GPRYCPSIEDKIVRFGER+GHQIFLEPEGL+ D Sbjct: 243 TTDATHKIIADNIHQSAMYSGQIEGVGPRYCPSIEDKIVRFGERDGHQIFLEPEGLDDDT 302 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LPE++Q FIRTIPGLE+V I++PGYAIEYD+++P+EL +L +K+ GLF Sbjct: 303 VYPNGISTSLPEDVQDAFIRTIPGLEQVKILQPGYAIEYDHVDPRELELSLGVRKMPGLF 362 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEA AQGLVAG+N+A +S FSRTDSYIGVMIDDLTS+G+ EPY Sbjct: 363 LAGQINGTTGYEEAGAQGLVAGLNAALRSIGRTPHFFSRTDSYIGVMIDDLTSRGITEPY 422 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+SLR DNAD RLTP G+ LGC+G+ R++RF + Y R+LL+SL +T Sbjct: 423 RMFTSRAEYRLSLRADNADMRLTPAGITLGCVGDARRQRFEAWKHSYETGRTLLQSLSVT 482 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + QDG+ RTA++ LSYPD SI L + P+ + + V+E L+I+++YA Sbjct: 483 PSEGKRFGLKLNQDGQRRTAFDILSYPDQSIAALKPLWPELQTIPAGVVEALEIDAAYAV 542 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + ++ +E IP DFDY LP LSNELK+KL+ KP NL QA K++G+TPA Sbjct: 543 YMERQATDIAGVRRDENTSIPDDFDYEVLPGLSNELKQKLAQHKPRNLAQAMKVDGVTPA 602 Query: 605 ALNLLLIYIKKNTVKLNEI 623 A++L+L ++++ + + Sbjct: 603 AISLILSWLRRQVRQAQRV 621 >gi|315644289|ref|ZP_07897459.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Paenibacillus vortex V453] gi|315280664|gb|EFU43953.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Paenibacillus vortex V453] Length = 628 Score = 803 bits (2073), Expect = 0.0, Method: Composition-based stats. Identities = 270/619 (43%), Positives = 385/619 (62%), Gaps = 2/619 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +YDVIV+G GHAGCEAA +A++GA T ++T + M CNP+IGG KGH+VRE Sbjct: 4 MGGTYDVIVVGAGHAGCEAALASARMGAETLMVTINLDMVAFMPCNPSIGGPAKGHVVRE 63 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G MGR D IQ R+LN KGPAV R QAD+ Y+ M+ + +E L + Q Sbjct: 64 IDALGGEMGRNIDKTFIQMRMLNTGKGPAVHALRAQADKFSYQHTMKETMEKEEKLTLRQ 123 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G V E + I+ Q + R VVLTTGT+LRG + +G+L +G PS Sbjct: 124 GMVDQLIVEDGVCVGILTQTGTEYRAKAVVLTTGTYLRGKVIMGELMYESGPNNQQPSVK 183 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L ++ + FD R KTGTP R+ TI + KTE Q D++ FS+ T N Q+ C Sbjct: 184 LAHNLRELGFDLVRFKTGTPPRVHKDTIDFSKTEIQPGDDKPKFFSYETKSSDNEQLPCW 243 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T T+++TH+II +N+ + ++SG I+ GPRYCPSIEDKIVRF ++ HQIFLEPEG N Sbjct: 244 LTYTSVDTHQIINDNLHRAPMFSGIIEGTGPRYCPSIEDKIVRFADKPKHQIFLEPEGKN 303 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T Y G+ST+LPE++Q +R+IPG+EKV ++R GYAIEYD + P +L+P+LETKK+ Sbjct: 304 TKEYYVQGLSTSLPEDVQLAVLRSIPGMEKVEMMRNGYAIEYDAMVPTQLWPSLETKKLP 363 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQINGT+GYEEAA QG++AGIN+ARK + + R+ YIGV+IDDL +KG Sbjct: 364 GLFTAGQINGTSGYEEAAGQGIMAGINAARKVQDKEPVVLDRSQGYIGVLIDDLVTKGTN 423 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAEYR+ LR DNAD RLT IG +G I E R +F + Q L+ Sbjct: 424 EPYRLLTSRAEYRLLLRHDNADLRLTEIGHDIGLISEERYAKFLQKKQLVEQEIERLRQA 483 Query: 482 VLTSKNLSST--SISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + +++T + L P+ S + S+ P + E+++I+ Sbjct: 484 KVKPVEVNATLEAAGSAPIVDGSNLLTILRRPEVSFAMIESLSPSPYDLDEDMKEQVEIQ 543 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 YA Y +Q+ ++++ EK+ IP+D Y + L+ E ++KL+ ++P ++ QAS+I Sbjct: 544 IKYAGYIEKQLGHVEKLQKMEKKRIPEDIVYDDINGLAMEARQKLNKIRPISIGQASRIA 603 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+TPA +++LL+Y++ Sbjct: 604 GVTPADISILLVYLEHYNR 622 >gi|153212965|ref|ZP_01948559.1| glucose inhibited division protein A [Vibrio cholerae 1587] gi|153829679|ref|ZP_01982346.1| glucose inhibited division protein A [Vibrio cholerae 623-39] gi|124116191|gb|EAY35011.1| glucose inhibited division protein A [Vibrio cholerae 1587] gi|148874855|gb|EDL72990.1| glucose inhibited division protein A [Vibrio cholerae 623-39] Length = 631 Score = 803 bits (2073), Expect = 0.0, Method: Composition-based stats. Identities = 281/630 (44%), Positives = 387/630 (61%), Gaps = 6/630 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA AA+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHETFDVIVVGGGHAGTEAALAAARTGQRTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRNVLENTPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + I +V Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQAVDDVIVEHDHIRGVVTQMGLKFHAKAVVLTVGTFLGGKIHIGLENYAGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D ++ + E Q D FSFM + + RQI Sbjct: 182 ALAHRLRELPFRVDRLKTGTPPRIDANSVDFSVLEAQHGDNPTPVFSFMGKREHHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +++ HQIF+EPEG Sbjct: 242 CYITHTNERTHDVIRANLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADKDSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTTELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 IHGLFFAGQINGTTGYEEAAAQGLMAGLNASLYSQDKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG + + R RF + I R L+ Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLVDDARWARFNQKIDNMAKERQRLQ 481 Query: 480 SLVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIER 535 + ++ ++ + + + L P+ + + L ++ A + E+ Sbjct: 482 ETWMNPNSVGVEQLNTLLKTPMSREASGEDLLRRPEMTYELLTTLPAFAPALEDAEAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y RQ E ++ E +P + DY + LSNE+ KL+ KP + A Sbjct: 542 VEIQVKYDGYIQRQQDEIEKSLRHEHTKLPAELDYKQVKGLSNEVVLKLNAAKPETIGIA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV-KLNEIV 624 S+I G+TPAA+++LL+++KK+ + K E Sbjct: 602 SRISGITPAAISILLVHLKKHGMLKKGEAA 631 >gi|297539954|ref|YP_003675723.1| glucose inhibited division protein A [Methylotenera sp. 301] gi|297259301|gb|ADI31146.1| glucose inhibited division protein A [Methylotenera sp. 301] Length = 633 Score = 803 bits (2073), Expect = 0.0, Method: Composition-based stats. Identities = 289/626 (46%), Positives = 393/626 (62%), Gaps = 5/626 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++G T L+TH T+G MSCNP+IGG+GKGHLV+EIDAL Sbjct: 7 FDVIVVGGGHAGTEAALASARMGQKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 67 GGAMAAATDEGGIQFRVLNSSKGPAVRATRAQADRVLYKAAIRHRLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + +V Q +VVLT GTFL G++H+G AGR GD P+ SL Sbjct: 127 DIILEGDRAAGVVTQIGLRFTSKSVVLTAGTFLGGLVHVGLQNYSAGRAGDPPAISLAAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + GRLKTGTP R+DG+TI + Q D+ + FSFM + + Q+ C IT Sbjct: 187 LREIGLPAGRLKTGTPPRIDGRTIDYSVMTIQPGDDPVPVFSFMGNVAHHPAQLPCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II + S +Y+G I+ GPRYCPS+EDKI RF +++ HQIFLEPEGL T+ Sbjct: 247 TNERTHDIIRSGLDRSPMYTGVIEGVGPRYCPSVEDKIHRFADKDSHQIFLEPEGLTTNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK + GLF Sbjct: 307 VYPNGISTSLPFDIQLALVRSVRGLENAHILRPGYAIEYDYYDPRGLKSSLETKMVQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG N+A S + C +R ++Y+GVM+DDL ++GV EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGANAALYSQGKESWCPARDEAYLGVMVDDLITRGVTEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG KLG + + R + F++ + + LK + Sbjct: 427 RMFTSRAEYRLQLREDNADMRLTEIGRKLGLVDDARWEAFSRKKEAVEREQDRLKKTFVQ 486 Query: 485 SKNLSST---SISFKQDGKTRTAYEFLSYPDFSIQNLFSICP-DARKFSSLVIERLQIES 540 N+ + + K + +E L P+ S + + ++ + V E+++I + Sbjct: 487 PANVPTEKMVEMFGKPLEHEYSLFELLRRPEVSYEAVLTLGEIGLGEVEPSVREQVEIAA 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E + +E +P + DY + L E ++KL+ KP + QAS+I G Sbjct: 547 KYQGYIDRQTDEVARSRGQENTRLPDNLDYREIHGLPIEAQQKLNAQKPETIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTVKLNEIVLV 626 +TPAA++LLL+Y+K+ + L Sbjct: 607 ITPAAISLLLVYLKRQSRSKPAADLA 632 >gi|227354887|ref|ZP_03839302.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme (glucose-inhibited division protein A) [Proteus mirabilis ATCC 29906] gi|227165040|gb|EEI49876.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme (glucose-inhibited division protein A) [Proteus mirabilis ATCC 29906] Length = 632 Score = 803 bits (2073), Expect = 0.0, Method: Composition-based stats. Identities = 294/622 (47%), Positives = 393/622 (63%), Gaps = 7/622 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EID Sbjct: 5 EHFDVIVIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 A+ GLM D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NL + Q Sbjct: 65 AMGGLMATAIDHAGIQFRTLNASKGPAVRATRAQADRVLYRQAIRTTLENQPNLMIFQQP 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + ++ V + R VVLT GTFL G IHIG GR GD PS SL Sbjct: 125 VEDLIVENDQVTGAVTRMGLKFRAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPSVSLS 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGI 242 + + GRLKTGTP R+D +TI + + Q D + FSF+ + + Q+ C I Sbjct: 185 HRLRELPLRVGRLKTGTPPRIDARTIDFSQLAPQLGDNPMPVFSFLGNVDQHPEQMPCHI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL + Sbjct: 245 THTNEQTHEIIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNSHQIFLEPEGLTS 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + +YPNGIST+LP ++Q Q + ++ G+E IIRPGYAIEYD+ +P++L TLE+K I+G Sbjct: 305 NEIYPNGISTSLPFDVQMQIVNSMKGMENAKIIRPGYAIEYDFFDPRDLKQTLESKFING 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AG+N+AR + + R +YIGV++DDL + G E Sbjct: 365 LFFAGQINGTTGYEEAAAQGLLAGLNAARYAFDQEGWFPRRDQAYIGVLVDDLCTLGTKE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT IG +LG + + R +F++ ++ R L+ + Sbjct: 425 PYRMFTSRAEYRLMLREDNADLRLTEIGRELGMVDDNRWAQFSEKVELVEKERQRLRDIW 484 Query: 483 LTSK--NLSSTSISFK-QDGKTRTAYEFLSYPDFSIQNLFSI---CPDARKFSSLVIERL 536 + K NL + K K + L P+ + + L I P E++ Sbjct: 485 VHPKADNLEEINQLLKTPLSKEANGEDLLRRPEMTYEILKKIPRFAPGIDDSRPQAAEQV 544 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y Y RQ E ++ E +P D DY + LSNE+ KL+ KP ++ QAS Sbjct: 545 EIQVKYEGYINRQQEEIEKQLRNESAALPIDIDYKQVSGLSNEVIAKLNDHKPTSIGQAS 604 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA+++LL+++KK + Sbjct: 605 RISGVTPAAISILLVWLKKQGL 626 >gi|262172752|ref|ZP_06040430.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio mimicus MB-451] gi|261893828|gb|EEY39814.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio mimicus MB-451] Length = 631 Score = 803 bits (2073), Expect = 0.0, Method: Composition-based stats. Identities = 284/630 (45%), Positives = 386/630 (61%), Gaps = 6/630 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA AA+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHETFDVIVVGGGHAGTEAALAAARTGQRTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRSVLENTPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + I +V Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQAVDDVIVENDHIRGVVTQMGLKFHAKAVVLTVGTFLGGKIHIGLENFAGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D ++ + E Q D FSFM + + RQI Sbjct: 182 ALAHRLRELPFRVDRLKTGTPPRIDANSVDFSVLEAQHGDNPTPVFSFMGKREHHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CYITHTNERTHDVIRANLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTTELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 IHGLFFAGQINGTTGYEEAAAQGLMAGLNASLYSQDKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG + + R RF + I R L+ Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLVDDERWARFNQKIDNMAKERLRLQ 481 Query: 480 SLVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIER 535 + ++ ++ + + + L P+ + + L ++ S E+ Sbjct: 482 ETWMNPNSVGVEQLNALLKTPMSREASGEDLLRRPEMTYELLTTLPAFTPALEDSEAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y RQ E ++ E +P D DY + LSNE+ KLS KP + A Sbjct: 542 VEIQVKYDGYIQRQQDEIEKSLRHEHTKLPVDLDYKQVKGLSNEVVLKLSTTKPETIGIA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV-KLNEIV 624 S+I G+TPAA+++LL+++KK+ + K E Sbjct: 602 SRISGITPAAISILLVHLKKHGMLKKGEAA 631 >gi|183597128|ref|ZP_02958621.1| hypothetical protein PROSTU_00367 [Providencia stuartii ATCC 25827] gi|188023438|gb|EDU61478.1| hypothetical protein PROSTU_00367 [Providencia stuartii ATCC 25827] Length = 629 Score = 803 bits (2073), Expect = 0.0, Method: Composition-based stats. Identities = 288/620 (46%), Positives = 388/620 (62%), Gaps = 5/620 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EID Sbjct: 5 EQFDVIVIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL GLM D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NL + Q Sbjct: 65 ALGGLMAIATDKAGIQFRTLNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQP 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E N ++ V + + VVLT GTFL G IHIG GR GD PS SL Sbjct: 125 VEDLIVENNTVTGAVTRMGLKFKAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPSVSLS 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGI 242 + RLKTGTP R+D +TI + + +Q D+ + FSF+ + + Q + C I Sbjct: 185 QRLRELPLRVNRLKTGTPPRIDARTIDFSQLAQQLGDDPMPVFSFLGSQDQHPQQMPCYI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +R+ HQIFLEPEGL + Sbjct: 245 THTNEKTHDVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRDAHQIFLEPEGLTS 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + +YPNGIST+LP ++Q Q + ++ G+E I+RPGYAIEYD+ +P++L TLE+K I+G Sbjct: 305 NEIYPNGISTSLPFDVQMQIVHSMKGMENARIVRPGYAIEYDFFDPRDLKQTLESKFING 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEA AQGL+AG+N+A+ + L+ R +Y+GV++DDL + G E Sbjct: 365 LFFAGQINGTTGYEEAGAQGLLAGLNAAQYAFDLEGWFPRRDQAYMGVLVDDLCTLGTKE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT G +LG + + R F ++ R LK + Sbjct: 425 PYRMFTSRAEYRLMLREDNADLRLTEKGRELGLVDDVRWAHFNNKVELIEKERQRLKDIW 484 Query: 483 LTSKNLSSTSIS---FKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQI 538 + K+ I+ K + L P+ Q L S+ A ++++I Sbjct: 485 VHPKSEGHDEINQILSVPLSKEANGEDLLRRPEMDYQTLISLSRFAPGITDPQAADQVEI 544 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + Y Y RQ E + E L+P D DY + LSNE+ KL+ KP ++ QAS+I Sbjct: 545 QVKYEGYIARQQEEIERQLRNENTLLPVDLDYKQVKGLSNEVMAKLNDHKPTSIGQASRI 604 Query: 599 EGMTPAALNLLLIYIKKNTV 618 G+TPAA+++LL+++KK + Sbjct: 605 SGITPAAISILLVWLKKQGM 624 >gi|264676173|ref|YP_003276079.1| glucose inhibited division protein A [Comamonas testosteroni CNB-2] gi|262206685|gb|ACY30783.1| glucose inhibited division protein A [Comamonas testosteroni CNB-2] Length = 653 Score = 803 bits (2073), Expect = 0.0, Method: Composition-based stats. Identities = 290/642 (45%), Positives = 396/642 (61%), Gaps = 23/642 (3%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 M + +DVIV+GGGHAG EAA AA++G+ T L+TH T+G MSCNP+IGG+GKGHLV+ Sbjct: 1 MYPQEFDVIVVGGGHAGTEAALAAARMGSKTLLLTHNIETLGQMSCNPSIGGIGKGHLVK 60 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DAL G M D GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Sbjct: 61 EVDALGGAMALATDKGGIQFRILNSSKGPAVRATRAQADRILYKAAIREMLENQPNLWLF 120 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + + V Q R TVVLT GTFL G IH+G AGR GD P+ Sbjct: 121 QQAVDDLMVEGDRVVGAVTQVGLKFRSRTVVLTAGTFLDGKIHVGLNNYAAGRAGDPPAV 180 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERL--------IPFSFMTDK 232 SL + GRLKTGTP R+DG++I + + E+Q D FSFM ++ Sbjct: 181 SLSARLKELKLPQGRLKTGTPPRIDGRSIDFSQCEEQPGDGMPGGVNEGEVPVFSFMGNR 240 Query: 233 -ITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGH 291 + RQ+ C IT TN TH II S +++G I+ GPRYCPS+EDKI RF ++ H Sbjct: 241 AMHPRQMPCWITHTNARTHEIIRSGFDRSPMFTGKIEGVGPRYCPSVEDKINRFADKENH 300 Query: 292 QIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKEL 351 QIFLEPEGL T YPNGIST+LP +IQ++ +R++ GLE +I+RPGYAIEYDY +P+ L Sbjct: 301 QIFLEPEGLTTHEFYPNGISTSLPFDIQYELVRSMKGLENAHILRPGYAIEYDYFDPRSL 360 Query: 352 FPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 + ETK+I GLF AGQINGTTGYEEAAAQGL AG+N+A + R ++Y+GV+ Sbjct: 361 KSSFETKQIQGLFFAGQINGTTGYEEAAAQGLFAGLNAALQCRGEGPWMPRRDEAYLGVL 420 Query: 412 IDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEY 471 +DDL +KGV EPYRMFTSRAE+R+ LR DNAD RLT G ++G + + R F++ Sbjct: 421 VDDLITKGVTEPYRMFTSRAEFRLQLREDNADMRLTEAGRQMGLVDDARWDSFSRKRDAV 480 Query: 472 NFLRSLLKSLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLF--------- 519 + LKS + + +++ + K + ++ L P L Sbjct: 481 SRETERLKSTWVNPRVVAAEESERVLGKAMEREYNLFDLLRRPGVDYDKLMGMNQGKYAS 540 Query: 520 -SICPD-ARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALS 577 + P+ + S+ VIE+++I + Y+ Y RQ E + E+ +P DFDY + ALS Sbjct: 541 ADVQPEALGELSAPVIEQVEIAAKYSGYIDRQKDEVERAAHFERLRLPLDFDYMQVAALS 600 Query: 578 NELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 E+++KL +P L QAS+I G+TPAA++LL++++KK K Sbjct: 601 FEVRQKLQKHRPETLGQASRISGVTPAAISLLMVHLKKGGFK 642 >gi|329925075|ref|ZP_08280019.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Paenibacillus sp. HGF5] gi|328940194|gb|EGG36526.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Paenibacillus sp. HGF5] Length = 628 Score = 803 bits (2073), Expect = 0.0, Method: Composition-based stats. Identities = 272/621 (43%), Positives = 384/621 (61%), Gaps = 6/621 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +YDVIV+G GHAGCEAA +A++GA T ++T + M CNP+IGG KGH+VRE Sbjct: 4 MGGTYDVIVVGAGHAGCEAALASARMGAETLMVTINLDMVAFMPCNPSIGGPAKGHVVRE 63 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G MGR D IQ R+LN KGPAV R QAD+ Y+ M+ + +E L + Q Sbjct: 64 IDALGGEMGRNIDKTFIQMRMLNTGKGPAVYALRAQADKFSYQHTMKETMEKEEKLTLRQ 123 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G V E + IV Q + R VVLTTGT+LRG + +G+L +G PS Sbjct: 124 GMVDQLIVEDGVCVGIVTQTGTEYRAKAVVLTTGTYLRGKVIMGELMYESGPNNQQPSVK 183 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L ++ + FD R KTGTP R+ TI + KTE Q DE FS+ T N Q+ C Sbjct: 184 LAHNLRELGFDLVRFKTGTPPRVHKDTIDFSKTEIQPGDENPKFFSYETKSSDNEQLPCW 243 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T T+++TH+II +N+ + ++SG I+ GPRYCPSIEDKIVRF ++ HQIFLEPEG N Sbjct: 244 LTYTSVDTHKIINDNLHRAPMFSGVIEGTGPRYCPSIEDKIVRFADKPKHQIFLEPEGKN 303 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T Y G+ST++PE++Q +R+IPG+EKV ++R GYAIEYD + P +L+P+LETKK+ Sbjct: 304 TKEYYVQGLSTSMPEDVQLAVLRSIPGMEKVEMMRNGYAIEYDAMVPTQLWPSLETKKLP 363 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQINGT+GYEEAA QG++AGIN+ARK + + R+ YIGV+IDDL +KG Sbjct: 364 GLFTAGQINGTSGYEEAAGQGIMAGINAARKVQGKEPVILDRSQGYIGVLIDDLVTKGTN 423 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAEYR+ LR DNAD RLT IG +G I E R +F Q L+ Sbjct: 424 EPYRLLTSRAEYRLLLRHDNADLRLTEIGHDIGLISEERYAKFLLKKQLVEQEIERLRQT 483 Query: 482 VLTSKN----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 + L + + DG L P+ + + S+ P + + E+++ Sbjct: 484 KVKPVEVNAMLEAAGSAPIVDGSNML--TILRRPEITFAMVESLSPSPYELDEEMKEQVE 541 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ YA Y +Q+ ++++ EK+ IP+D Y + L+ E ++KL+ ++P ++ QAS+ Sbjct: 542 IQIKYAGYIEKQLGHVEKLQKMEKKRIPEDIVYDEINGLAMEARQKLNKIRPISIGQASR 601 Query: 598 IEGMTPAALNLLLIYIKKNTV 618 I G+TPA +++LL+Y++ Sbjct: 602 IAGVTPADISILLVYLEHYNR 622 >gi|253997705|ref|YP_003049769.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Methylotenera mobilis JLW8] gi|253984384|gb|ACT49242.1| glucose inhibited division protein A [Methylotenera mobilis JLW8] Length = 639 Score = 802 bits (2072), Expect = 0.0, Method: Composition-based stats. Identities = 290/621 (46%), Positives = 394/621 (63%), Gaps = 5/621 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA +A++G T L+TH T+G MSCNP+IGG+GKGHLV+EIDAL Sbjct: 7 FDVIVVGGGHAGTEAALASARMGQKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN KGPAVR R QADR LY+ A++ + +QENL + Q V Sbjct: 67 GGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRVLYKAAIRHRLENQENLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + +V Q VVLT GTFL G++H+G AGR GD PS SL Sbjct: 127 DIILEGDRAAGVVTQIGLRFAAKAVVLTAGTFLGGLVHVGLQNYQAGRAGDPPSVSLAAR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + GRLKTGTP R+DG+TI + Q D + FSF+ + + Q+ C IT Sbjct: 187 LREIGLPAGRLKTGTPPRIDGRTIDYSVMTIQPGDNPVPVFSFLGNAAQHPAQLPCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II + S +Y+G I+ GPRYCPS+EDKI RF ++ HQIFLEPEGL T+ Sbjct: 247 TNERTHDIIRSGLDRSPMYTGVIEGVGPRYCPSVEDKIHRFADKESHQIFLEPEGLATNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK + GLF Sbjct: 307 IYPNGISTSLPFDIQLALVRSVRGLENAHILRPGYAIEYDYYDPRGLKSSLETKAVQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG N+A + + C +R ++Y+GV++DDL ++GV EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGANAALYAQGKEAWCPARDEAYLGVLVDDLITRGVSEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT IG KLG + + R + F++ + + LK + Sbjct: 427 RMFTSRAEYRLQLREDNADMRLTEIGRKLGLVDDARWEAFSRKKEAIEREQERLKKTFVQ 486 Query: 485 SKNLSSTSIS---FKQDGKTRTAYEFLSYPDFSIQNLFSIC-PDARKFSSLVIERLQIES 540 NLS+ + K + +E L P S + + S+ + V E+++I + Sbjct: 487 PANLSAEQMQAVFGKPLEHEYSLFELLRRPAVSYEAVLSLDASGLGELEPAVREQVEISA 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ+ E + +E ++PKD DY + L E ++KL+ KP + QAS+I G Sbjct: 547 KYQGYIDRQVEEVARSRGQENTILPKDLDYREIHGLPIEAQQKLNAHKPETIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTVKLN 621 +TPAA++LLL+Y+K+ + + Sbjct: 607 ITPAAISLLLVYLKRKSRAKS 627 >gi|259910326|ref|YP_002650682.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Erwinia pyrifoliae Ep1/96] gi|224965948|emb|CAX57481.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme, Glucose-inhibited division protein A [Erwinia pyrifoliae Ep1/96] gi|283480449|emb|CAY76365.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Erwinia pyrifoliae DSM 12163] Length = 629 Score = 802 bits (2072), Expect = 0.0, Method: Composition-based stats. Identities = 296/618 (47%), Positives = 387/618 (62%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIVIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLMG D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMGHAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLLVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGMDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+D +TI + Q D L FSFM D + Q + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARTIDFSLLAPQHGDNPLPVFSFMGDVRQHPQQVPCYITY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHEVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMHGMENAKIVRPGYAIEYDFFDPRDLKPTLESKYIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+ R S + R +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAGRLSADKESWAPRRDQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R RF + ++ R L+ + + Sbjct: 427 RMFTSRAEYRLMLREDNADLRLTAAGRELGLVDDARWARFNEKLESIEQERQRLRDIWVH 486 Query: 485 SKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPD-ARKFSSLVIERLQIES 540 K+ S+ K + + L P+ + Q L ++ + E+++I+ Sbjct: 487 PKSECVADVNSVISAALTKEASGEDLLRRPEMTYQQLMTLSHFAPALADAQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E E +P D DY + LSNE KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQEEIDRQLRNENTALPVDLDYQQVSGLSNEAIAKLNESKPGSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LLIY+KK + Sbjct: 607 ITPAAISILLIYLKKQGL 624 >gi|190150986|ref|YP_001969511.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307264343|ref|ZP_07545931.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|238692408|sp|B3H2Q2|MNMG_ACTP7 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|189916117|gb|ACE62369.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306870295|gb|EFN02051.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 630 Score = 802 bits (2072), Expect = 0.0, Method: Composition-based stats. Identities = 294/623 (47%), Positives = 387/623 (62%), Gaps = 5/623 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + YDVIV+GGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 IYHEIYDVIVVGGGHAGTEAALAPARMGLKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDA+ GLM D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Sbjct: 62 EIDAMGGLMAIAIDQAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDIF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q EV E N V + + +VVLT GTFL G IHIG GR GD + Sbjct: 122 QQEVVDILVENNRAVGAVTKMRLTFKARSVVLTAGTFLAGKIHIGLDNYAGGRAGDPAAT 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIE 239 L + + RLKTGTP RLD +TI +D KQ D L SFM + RQI Sbjct: 182 MLADRLRDLNLRIDRLKTGTPPRLDARTINFDVLAKQHGDAELPVMSFMGSVDLHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I ++ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEG Sbjct: 242 CYITHTNEQTHDLIRNSLDRSPMYTGVIEGIGPRYCPSIEDKVMRFSDRNSHQIYLEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L+T VYPNGIST+LP ++Q + ++ GLEK II+PGYAIEYDY +P++L PTLETK Sbjct: 302 LSTIEVYPNGISTSLPFDVQMGIVNSMKGLEKTRIIKPGYAIEYDYFDPRDLKPTLETKA 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AGIN+A + + +R +Y GV++DDL + G Sbjct: 362 IEGLFFAGQINGTTGYEEAAAQGLLAGINAALQVQGKEAWFPTRDLAYTGVLVDDLCTLG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYR+FTSRAEYR+ LR DNAD RLTPI +LG I + R RF + ++ LK Sbjct: 422 TKEPYRVFTSRAEYRLLLREDNADIRLTPIAHELGLIDDARWARFNQKMENIEREHERLK 481 Query: 480 SLVLTSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIER 535 + + ++ + + + + L P+ + L + A E+ Sbjct: 482 QIWIHPQSEHLAVVNELVNSPLTREASGEDLLRRPEVTYDKLTQVAAFAPALDDKQAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I Y Y Q E + K E LIP +FDY + +LSNE++ KL +P ++ QA Sbjct: 542 VEISIKYQGYIEHQQNEIERHKRHENTLIPAEFDYDKVESLSNEVRAKLMQHRPVSIGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV 618 S+I G+TPAA+++LL+ +KK + Sbjct: 602 SRISGITPAAISILLVNLKKQGM 624 >gi|187925874|ref|YP_001897516.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia phytofirmans PsJN] gi|238691589|sp|B2T7L1|MNMG_BURPP RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|187717068|gb|ACD18292.1| glucose inhibited division protein A [Burkholderia phytofirmans PsJN] Length = 652 Score = 802 bits (2072), Expect = 0.0, Method: Composition-based stats. Identities = 284/631 (45%), Positives = 388/631 (61%), Gaps = 15/631 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + +DVIV+GGGHAG EAA +A++G +T L+TH T+G MSCNP+IGG+GKGHLV+ Sbjct: 2 LFPTEFDVIVVGGGHAGTEAALASARMGNTTLLLTHNIETLGQMSCNPSIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DAL G M D GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Sbjct: 62 EVDALGGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRLLYKQAIRHRLENQPNLWLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + + V Q R VVLT GTFL G IH+G GR GD + Sbjct: 122 QQAVDDLMVEGDRVVGAVTQVGIRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAV 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTD-KITNRQI 238 SL + GRLKTGTP R+DG+TI + + E+Q D +P FSF+ + RQ+ Sbjct: 182 SLSARLKELKLPQGRLKTGTPPRIDGRTIDFSQLEEQPGDLDPVPVFSFLGRVEQHPRQV 241 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C +T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPE Sbjct: 242 PCWVTHTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPE 301 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL T+ YPNGIST+LP ++Q + +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 302 GLTTNEFYPNGISTSLPFDVQLELVRSMRGLEHAHILRPGYAIEYDYFDPRGLKASLETK 361 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I+GLF AGQINGTTGYEEAAAQGL+AGIN+ + C R +Y+GV++DDL ++ Sbjct: 362 VINGLFFAGQINGTTGYEEAAAQGLLAGINAGLFVQGKEAWCPRRDQAYLGVLVDDLVTR 421 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 GV EPYRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F++ + L Sbjct: 422 GVSEPYRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDDIRWDAFSRKRDAVSRETERL 481 Query: 479 KSLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI------CPDARKFS 529 ++ + K L +T + K + + L P S + + P+A Sbjct: 482 RTTWVNPKTLPADEATPLLGKPIDHEYSLADLLRRPGVSYDGVCGLRAGACAAPEALAED 541 Query: 530 S----LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 + E+++I Y Y RQ E + + E +P+ DY+ + LS E ++KL+ Sbjct: 542 DVLLAQIKEQIEIGIKYQGYIDRQAGEIERNEAHESTRLPEGVDYAEVRGLSFEARQKLT 601 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYIKKN 616 +P + QAS+I G+TPAA++LL++++K+ Sbjct: 602 QFRPETIGQASRISGITPAAISLLMVHLKRG 632 >gi|15642768|ref|NP_232401.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae O1 biovar El Tor str. N16961] gi|147674621|ref|YP_001218410.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae O395] gi|153820114|ref|ZP_01972781.1| glucose inhibited division protein A [Vibrio cholerae NCTC 8457] gi|153821973|ref|ZP_01974640.1| glucose inhibited division protein A [Vibrio cholerae B33] gi|227082887|ref|YP_002811438.1| glucose inhibited division protein A [Vibrio cholerae M66-2] gi|229508288|ref|ZP_04397792.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae BX 330286] gi|229508640|ref|ZP_04398135.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae B33] gi|229517144|ref|ZP_04406590.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae RC9] gi|229520164|ref|ZP_04409591.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae TM 11079-80] gi|229606562|ref|YP_002877210.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae MJ-1236] gi|254291137|ref|ZP_04961934.1| glucose inhibited division protein A [Vibrio cholerae AM-19226] gi|254851566|ref|ZP_05240916.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae MO10] gi|255746815|ref|ZP_05420761.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholera CIRS 101] gi|262155895|ref|ZP_06029017.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae INDRE 91/1] gi|262167091|ref|ZP_06034806.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae RC27] gi|298501187|ref|ZP_07010986.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae MAK 757] gi|11386838|sp|Q9KNG4|MNMG_VIBCH RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|172047493|sp|A5F468|MNMG_VIBC3 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|254811522|sp|C3LSK0|MNMG_VIBCM RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|9657377|gb|AAF95914.1| glucose inhibited division protein A [Vibrio cholerae O1 biovar El Tor str. N16961] gi|126509345|gb|EAZ71939.1| glucose inhibited division protein A [Vibrio cholerae NCTC 8457] gi|126520512|gb|EAZ77735.1| glucose inhibited division protein A [Vibrio cholerae B33] gi|146316504|gb|ABQ21043.1| glucose inhibited division protein A [Vibrio cholerae O395] gi|150422982|gb|EDN14932.1| glucose inhibited division protein A [Vibrio cholerae AM-19226] gi|227010775|gb|ACP06987.1| glucose inhibited division protein A [Vibrio cholerae M66-2] gi|227011997|gb|ACP08207.1| glucose inhibited division protein A [Vibrio cholerae O395] gi|229342758|gb|EEO07749.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae TM 11079-80] gi|229346207|gb|EEO11179.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae RC9] gi|229354354|gb|EEO19282.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae B33] gi|229354561|gb|EEO19483.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae BX 330286] gi|229369217|gb|ACQ59640.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae MJ-1236] gi|254847271|gb|EET25685.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae MO10] gi|255735572|gb|EET90971.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholera CIRS 101] gi|262024477|gb|EEY43163.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae RC27] gi|262030347|gb|EEY48989.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae INDRE 91/1] gi|297540059|gb|EFH76121.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae MAK 757] Length = 631 Score = 802 bits (2072), Expect = 0.0, Method: Composition-based stats. Identities = 281/630 (44%), Positives = 387/630 (61%), Gaps = 6/630 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA AA+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHETFDVIVVGGGHAGTEAALAAARTGQRTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRNVLENTPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + I +V Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQAVDDVIVEHDHIRGVVTQMGLKFHAKAVVLTVGTFLGGKIHIGLENYAGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D ++ + E Q D FSFM + + RQI Sbjct: 182 ALAHRLRELPFRVDRLKTGTPPRIDANSVDFSVLEAQHGDNPTPVFSFMGKREHHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +++ HQIF+EPEG Sbjct: 242 CYITHTNERTHDVIRANLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADKDSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTTELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKY 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 IHGLFFAGQINGTTGYEEAAAQGLMAGLNASLYSQDKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG + + R RF + I R L+ Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLVDDARWARFNQKIDNMAKERQRLQ 481 Query: 480 SLVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIER 535 + ++ ++ + + + L P+ + + L ++ A + E+ Sbjct: 482 ETWMNPNSVGVEQLNTLLKTPMSREASGEDLLRRPEMTYELLTTLPAFAPALEDAEAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y RQ E ++ E +P + DY + LSNE+ KL+ KP + A Sbjct: 542 VEIQVKYDGYIQRQQDEIEKSLRHEHTKLPAELDYKQVKGLSNEVVLKLNAAKPETIGIA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV-KLNEIV 624 S+I G+TPAA+++LL+++KK+ + K E Sbjct: 602 SRISGITPAAISILLVHLKKHGMLKKGEAA 631 >gi|149182298|ref|ZP_01860777.1| glucose-inhibited division protein A [Bacillus sp. SG-1] gi|148849990|gb|EDL64161.1| glucose-inhibited division protein A [Bacillus sp. SG-1] Length = 629 Score = 802 bits (2072), Expect = 0.0, Method: Composition-based stats. Identities = 277/619 (44%), Positives = 390/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVIVIG GHAG EA AA++GA T ++T + M CNP++GG KG +VREIDA Sbjct: 7 QFDVIVIGAGHAGVEAGLAAARMGAKTLMVTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ M++ I + N+ ++QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFAYQHEMKKTIEDEPNMTLLQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + +V Q + R TVV+TTGTFLRG I +G L+ +G PS L Sbjct: 127 ESLIIEDDECKGVVTQTGAEYRAKTVVITTGTFLRGEIILGDLRYSSGPNNQQPSIKLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++ KTI + KTE Q D+ FS+ T K Q+ C +T Sbjct: 187 HLQELGFDMVRFKTGTPPRVNSKTIDYSKTEIQPGDDVPRAFSYETTKYITDQLPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN ETH++I +N+ S +YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TNAETHQLIDDNLGRSPMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGKNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q + + TIPGLEK ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQMKILATIPGLEKAQLMRAGYAIEYDSIVPTQLWPTLETKKIKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A ++ + + +R+D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGINAACRALDKEEVILNRSDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT IG K+G I + R +RF ++ L+++ L Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTDIGHKIGLISDERYERFLTKKALVEEEKARLQTIRLK 486 Query: 485 SKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + S +DG A + L P+ + ++ ++ P + + E+++I+ Sbjct: 487 PNEETQNVIKEAGGSELKDGI--LASDILRRPEMNYSHIKALIPREEPLTEDIEEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + ++K E + IP DY ++ L++E ++KL ++P +L QAS+I Sbjct: 545 IKYEGYIEKSLQQVDKMKKMENKKIPDFIDYDAINGLASEARQKLKEVRPLSLAQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 605 GVNPADVSILLVYIEQGKI 623 >gi|229524904|ref|ZP_04414309.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae bv. albensis VL426] gi|229338485|gb|EEO03502.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae bv. albensis VL426] Length = 631 Score = 802 bits (2072), Expect = 0.0, Method: Composition-based stats. Identities = 279/630 (44%), Positives = 386/630 (61%), Gaps = 6/630 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA AA+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHETFDVIVVGGGHAGTEAALAAARTGQRTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRNVLENTPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V + + I +V Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQAVDDVIVDNDHIRGVVTQMGLKFHAKAVVLTVGTFLGGKIHIGLENYAGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D ++ + E Q D FSFM + + RQI Sbjct: 182 ALAHRLRELPFRVDRLKTGTPPRIDANSVDFSVLEAQHGDNPTPVFSFMGKREHHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +++ HQIF+EPEG Sbjct: 242 CYITHTNERTHDVIRANLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADKDSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTTELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 IHGLFFAGQINGTTGYEEAAAQGLMAGLNASLYSQDKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG + + R RF + I R L+ Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLVDDARWARFNQKIDNMAKERQRLQ 481 Query: 480 SLVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIER 535 + ++ ++ + + + L P+ + + L ++ + E+ Sbjct: 482 ETWMNPNSVGVEQLNTLLKTPMSREASGEDLLRRPEMTYELLTTLPAFTPALEDAEAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y RQ E ++ E +P + DY + LSNE+ KL+ KP + A Sbjct: 542 VEIQVKYDGYIQRQQDEIEKSLRHEHTKLPAELDYKQVKGLSNEVVLKLNAAKPETIGIA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV-KLNEIV 624 S+I G+TPAA+++LL+++KK+ + K E Sbjct: 602 SRISGITPAAISILLVHLKKHGMLKKGEAA 631 >gi|262402091|ref|ZP_06078655.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio sp. RC586] gi|262351737|gb|EEZ00869.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio sp. RC586] Length = 631 Score = 802 bits (2072), Expect = 0.0, Method: Composition-based stats. Identities = 284/630 (45%), Positives = 384/630 (60%), Gaps = 6/630 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA AA+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHETFDVIVVGGGHAGTEAALAAARTGQRTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRNVLENTPNLALF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + I +V Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQAVDDVIVENDHIRGVVTQMGLKFHAKAVVLTVGTFLGGKIHIGLENFAGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK-ITNRQIE 239 +L + + F RLKTGTP R+D ++ + E Q D FSFM + RQI Sbjct: 182 ALAHRLRELPFRVDRLKTGTPPRIDANSVDFSVLEAQHGDNPTPVFSFMGKREYHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CYITHTNERTHDVIRANLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTTELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 IHGLFFAGQINGTTGYEEAAAQGLMAGLNASLYSQDKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG + + R RF + I R L+ Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLVDDARWARFNQKIDNMAKERQRLQ 481 Query: 480 SLVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIER 535 + ++ ++ + + L P+ + + L ++ S E+ Sbjct: 482 DTWMNPNSVGVEQLNALLKTPMSREACGEDLLRRPEMTYELLTTLPAFVPVLEDSEAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y RQ E ++ E +P D DY + LSNE+ KLS KP + A Sbjct: 542 VEIQVKYDGYIQRQQDEIEKSLRHEHTKLPVDLDYKQVKGLSNEVVLKLSTTKPETIGIA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV-KLNEIV 624 S+I G+TPAA+++LL+++KK+ + K E Sbjct: 602 SRISGITPAAISILLVHLKKHGMLKKGEAA 631 >gi|261213272|ref|ZP_05927554.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio sp. RC341] gi|260837546|gb|EEX64249.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio sp. RC341] Length = 631 Score = 802 bits (2072), Expect = 0.0, Method: Composition-based stats. Identities = 283/630 (44%), Positives = 386/630 (61%), Gaps = 6/630 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA AA+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHETFDVIVVGGGHAGTEAALAAARTGQRTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRNVLENTPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V + + I +V Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQAVDDVIVDNDHIRGVVTQMGLKFHAKAVVLTVGTFLGGKIHIGLENFSGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D ++ + E Q D FSFM + + RQI Sbjct: 182 ALAHRLRELPFRVDRLKTGTPPRIDANSVDFSVLEAQHGDNPTPVFSFMGKREHHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF ++N HQIF+EPEG Sbjct: 242 CYITHTNDRTHDVIRANLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTTELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 IHGLFFAGQINGTTGYEEAAAQGLMAGLNASLYSQDKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG + + R RF + I R L+ Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLVDDARWARFNQKIDNMAKERQRLQ 481 Query: 480 SLVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIER 535 + ++ ++ + + + L P+ + + L ++ S E+ Sbjct: 482 ETWMNPNSVGVEQLNALLKTPMSREASGEDLLRRPEMTYELLTTLPAYTPALEDSEAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y RQ E ++ E +P D DY + LSNE+ KLS KP + A Sbjct: 542 VEIQVKYDGYIQRQQDEIEKSLRHEHTKLPIDLDYKQVKGLSNEVVLKLSTAKPETIGIA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV-KLNEIV 624 S+I G+TPAA+++LL+++KK+ + K E Sbjct: 602 SRISGITPAAISILLVHLKKHGMLKKGEAA 631 >gi|21961160|gb|AAM87686.1|AE014015_11 glucose-inhibited division protein [Yersinia pestis KIM 10] gi|45438630|gb|AAS64176.1| glucose inhibited division protein A [Yersinia pestis biovar Microtus str. 91001] Length = 656 Score = 802 bits (2071), Expect = 0.0, Method: Composition-based stats. Identities = 294/619 (47%), Positives = 396/619 (63%), Gaps = 5/619 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA Sbjct: 33 QFDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDA 92 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLM + D AGIQFR+LN KGPAVR R QADR LYRLA++ + +Q NL + Q V Sbjct: 93 LGGLMAKATDLAGIQFRILNASKGPAVRATRAQADRVLYRLAVRTALENQPNLMIFQQPV 152 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + V Q R VVLT GTFL G IHIG GR GD PS SL Sbjct: 153 EDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPSISLSQ 212 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGIT 243 + RLKTGTP R+D +TI + + Q D + FSF+ + + Q+ C IT Sbjct: 213 RLRELPLRVNRLKTGTPPRIDARTIDFSQLTPQLGDTPIPVFSFLGNAEQHPEQMACHIT 272 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 273 YTNEKTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNSHQIFLEPEGLTSN 332 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q Q +R++ GLE IIRPGYAIEYD+ +P++L PTLE+K I GL Sbjct: 333 EIYPNGISTSLPFDVQMQIVRSMKGLENARIIRPGYAIEYDFFDPRDLKPTLESKYIQGL 392 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+ R +N+ D R ++Y+GV++DDL++ G EP Sbjct: 393 FFAGQINGTTGYEEAAAQGLLAGLNAGRFANEEDGWSPRRDEAYLGVLVDDLSTLGTKEP 452 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT G KLG + + R F++ +++ R L+ + + Sbjct: 453 YRMFTSRAEYRLMLREDNADLRLTETGRKLGLVDDIRWAHFSQKVEQIEKERQRLRDIWV 512 Query: 484 TSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIE 539 + + + I+ K E L P+ + L S+ ++++I+ Sbjct: 513 HPHSENVSEINALLKAPLSKEANGEELLRRPEIDYRLLTSLTSFGPALTDPQSADQVEIQ 572 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ E ++ E L+P D DY + LSNE+ KL+ KP ++ QAS+I Sbjct: 573 VKYEGYITRQQEEIEKQLRNENTLLPVDLDYQQVSGLSNEVIAKLNDHKPSSIGQASRIS 632 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+TPAA+++LL+++KK + Sbjct: 633 GITPAAISILLVWLKKQGL 651 >gi|197286880|ref|YP_002152752.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Proteus mirabilis HI4320] gi|238693206|sp|B4F0D8|MNMG_PROMH RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|194684367|emb|CAR46005.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme (glucose-inhibited division protein A) [Proteus mirabilis HI4320] Length = 632 Score = 802 bits (2071), Expect = 0.0, Method: Composition-based stats. Identities = 294/622 (47%), Positives = 394/622 (63%), Gaps = 7/622 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EID Sbjct: 5 EHFDVIVIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 A+ GLM D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NL + Q Sbjct: 65 AMGGLMATAIDHAGIQFRTLNASKGPAVRATRAQADRVLYRQAIRTTLENQPNLMIFQQP 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + ++ V + R VVLT GTFL G IHIG GR GD PS SL Sbjct: 125 VEDLIVENDQVTGAVTRMGLKFRAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPSVSLS 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGI 242 + + GRLKTGTP R+D +TI + + Q D + FSF+ + + Q+ C I Sbjct: 185 HRLRELPLRVGRLKTGTPPRIDARTIDFSQLAPQLGDNPMPVFSFLGNVDQHPEQMPCHI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II N++ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL + Sbjct: 245 THTNEQTHEIIRNNLERSPMYAGVIEGIGPRYCPSIEDKVMRFADRNSHQIFLEPEGLTS 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + +YPNGIST+LP ++Q Q + ++ G+E IIRPGYAIEYD+ +P++L TLE+K I+G Sbjct: 305 NEIYPNGISTSLPFDVQMQIVNSMKGMENAKIIRPGYAIEYDFFDPRDLKQTLESKFING 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AG+N+AR + + R +YIGV++DDL + G E Sbjct: 365 LFFAGQINGTTGYEEAAAQGLLAGLNAARYAFDQEGWFPRRDQAYIGVLVDDLCTLGTKE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT IG +LG + + R +F++ ++ R L+ + Sbjct: 425 PYRMFTSRAEYRLMLREDNADLRLTEIGRELGMVDDNRWAQFSEKVELVEKERQRLRDIW 484 Query: 483 LTSK--NLSSTSISFK-QDGKTRTAYEFLSYPDFSIQNLFSI---CPDARKFSSLVIERL 536 + K NL + K K + L P+ + + L I P E++ Sbjct: 485 VHPKADNLEEINQLLKTPLSKEANGEDLLRRPEMTYEILKKIPRFAPGIDDSRPQAAEQV 544 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y Y RQ E ++ E +P D DY + LSNE+ KL+ KP ++ QAS Sbjct: 545 EIQVKYEGYINRQQEEIEKQLRNESAALPIDIDYKQVSGLSNEVIAKLNDHKPTSIGQAS 604 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA+++LL+++KK + Sbjct: 605 RISGVTPAAISILLVWLKKQGL 626 >gi|91785745|ref|YP_560951.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Burkholderia xenovorans LB400] gi|123358350|sp|Q13SP0|MNMG_BURXL RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|91689699|gb|ABE32899.1| Glucose-inhibited division protein A subfamily [Burkholderia xenovorans LB400] Length = 652 Score = 802 bits (2071), Expect = 0.0, Method: Composition-based stats. Identities = 284/631 (45%), Positives = 389/631 (61%), Gaps = 15/631 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + +DVIV+GGGHAG EAA +A++G +T L+TH T+G MSCNP+IGG+GKGHLV+ Sbjct: 2 LFPTEFDVIVVGGGHAGTEAALASARMGNTTLLLTHNIETLGQMSCNPSIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DAL G M D GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Sbjct: 62 EVDALGGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRLLYKQAIRHRLENQPNLWLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + + V Q R VVLT GTFL G IH+G GR GD + Sbjct: 122 QQAVDDLMVEGDRVVGAVTQVGIRFRGRAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAV 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTD-KITNRQI 238 SL + GRLKTGTP R+DG+TI + + E+Q D +P FSF+ + RQ+ Sbjct: 182 SLSARLKELKLPQGRLKTGTPPRIDGRTIDFSQLEEQPGDLDPVPVFSFLGRVEQHPRQV 241 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C +T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPE Sbjct: 242 PCWVTHTNARTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPE 301 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL T+ YPNGIST+LP ++Q + +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 302 GLTTNEFYPNGISTSLPFDVQLELVRSMRGLEHAHILRPGYAIEYDYFDPRGLKASLETK 361 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 ISGLF AGQINGTTGYEEAAAQGL+AGIN+ + C R +Y+GV++DDL ++ Sbjct: 362 VISGLFFAGQINGTTGYEEAAAQGLLAGINAGLYVQGKEAWCPRRDQAYLGVLVDDLVTR 421 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 GV EPYRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F++ + L Sbjct: 422 GVSEPYRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDDVRWDAFSRKRDAVSRETERL 481 Query: 479 KSLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI------CPDARKFS 529 ++ + K L +T++ K + + L P S + ++ P+ Sbjct: 482 RTTWVNPKTLSADEATALLGKPIDHEYSLADLLRRPGVSYDGVCALRAGACAAPETLAED 541 Query: 530 S----LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 + E+++I Y Y RQ E + + E +P+ DY+ + LS E ++KL+ Sbjct: 542 DVLLAQIKEQIEIGIKYQGYIDRQAGEIERNEAHESTRLPEGLDYAEVRGLSFEARQKLT 601 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYIKKN 616 +P + QAS+I G+TPAA++LL++++K+ Sbjct: 602 QFRPETIGQASRISGITPAAISLLMVHLKRG 632 >gi|221069725|ref|ZP_03545830.1| glucose inhibited division protein A [Comamonas testosteroni KF-1] gi|220714748|gb|EED70116.1| glucose inhibited division protein A [Comamonas testosteroni KF-1] Length = 654 Score = 802 bits (2071), Expect = 0.0, Method: Composition-based stats. Identities = 288/642 (44%), Positives = 393/642 (61%), Gaps = 23/642 (3%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + +DVIV+GGGHAG EAA AA++G+ T L+TH T+G MSCNP+IGG+GKGHLV+ Sbjct: 2 LYPQEFDVIVVGGGHAGTEAALAAARMGSKTLLLTHNIETLGQMSCNPSIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DAL G M D GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Sbjct: 62 EVDALGGAMALATDKGGIQFRILNSSKGPAVRATRAQADRILYKAAIREMLENQPNLWLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + + V Q R TVVLT GTFL G IH+G AGR GD P+ Sbjct: 122 QQAVDDLMVEGDRVVGAVTQVGLKFRSRTVVLTAGTFLDGKIHVGLNNYAAGRAGDPPAV 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERL--------IPFSFMTDK 232 SL + GRLKTGTP R+DG++I + + E+Q D FSFM ++ Sbjct: 182 SLSARLKELQLPQGRLKTGTPPRIDGRSIDFSQCEEQPGDGMPGGVNEGEVPVFSFMGNR 241 Query: 233 -ITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGH 291 + RQ+ C IT TN TH II S +++G I+ GPRYCPS+EDKI RF ++ H Sbjct: 242 AMHPRQMPCWITHTNARTHEIIRSGFDRSPMFTGKIEGVGPRYCPSVEDKINRFADKESH 301 Query: 292 QIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKEL 351 QIFLEPEGL T YPNGIST+LP +IQ++ +R++ GLE +I+RPGYAIEYDY +P+ L Sbjct: 302 QIFLEPEGLTTHEFYPNGISTSLPFDIQYELVRSMKGLENAHILRPGYAIEYDYFDPRSL 361 Query: 352 FPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 + ETK+I GLF AGQINGTTGYEEAAAQGL AG+N+A + R ++Y+GV+ Sbjct: 362 KSSFETKQIQGLFFAGQINGTTGYEEAAAQGLFAGLNAALQCRGESPWMPRRDEAYLGVL 421 Query: 412 IDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEY 471 +DDL +KGV EPYRMFTSRAE+R+ LR DNAD RLT G ++G + + R F++ Sbjct: 422 VDDLITKGVTEPYRMFTSRAEFRLQLREDNADMRLTEAGRQMGLVDDVRWDSFSRKRDAV 481 Query: 472 NFLRSLLKSLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSIC------ 522 + LKS + + +++ + K + ++ L P L + Sbjct: 482 SRETERLKSTWVNPRVVAAEESERVLGKAMEREYNLFDLLRRPGVDYDKLMDMNQGKYAS 541 Query: 523 -----PDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALS 577 + S VIE+++I + Y+ Y RQ E + E+ +P DFDY + ALS Sbjct: 542 ADVQPEALGELSDPVIEQVEIAAKYSGYIDRQKDEVERAAHFERLRLPLDFDYMQVAALS 601 Query: 578 NELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 E+++KL +P L QAS+I G+TPAA++LL++++KK K Sbjct: 602 FEVRQKLQKHRPETLGQASRISGVTPAAISLLMVHLKKGGFK 643 >gi|293391117|ref|ZP_06635451.1| glucose-inhibited division protein A [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951651|gb|EFE01770.1| glucose-inhibited division protein A [Aggregatibacter actinomycetemcomitans D7S-1] Length = 629 Score = 802 bits (2071), Expect = 0.0, Method: Composition-based stats. Identities = 294/622 (47%), Positives = 389/622 (62%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +YDVIVIGGGHAG EAA ++G T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 YTETYDVIVIGGGHAGSEAALAPVRMGLKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDA+ GLM AD AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Q Sbjct: 63 IDAMGGLMATAADKAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRIALENQPNLDIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 E E++ + +V + V+LT GTFL G IHIG GR GD S + Sbjct: 123 QEATDILIEQDRATGVVTKMGLKFHAKAVILTAGTFLAGKIHIGLENYTGGRAGDPASVT 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IEC 240 L + RLKTGTP R+D +TI +D KQ D L FSFM + Q I C Sbjct: 183 LAQRLRDLNLRVDRLKTGTPPRIDARTINFDVLAKQHGDAVLPVFSFMGSVSDHPQQIPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL Sbjct: 243 YITHTNEQTHDVIRNNLDRSPMYTGVIEGIGPRYCPSIEDKVMRFADRNSHQIYLEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 ++ +YPNGIST+LP ++Q + ++ GLEK I++PGYAIEYDY +P++L PTLETK I Sbjct: 303 TSNEIYPNGISTSLPFDVQMGIVNSMKGLEKARIVKPGYAIEYDYFDPRDLKPTLETKAI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 SGLF AGQINGTTGYEEAAAQGL+AGIN+ + + R +Y+GV++DDL + G Sbjct: 363 SGLFFAGQINGTTGYEEAAAQGLLAGINAGLYVQEKEVWFPRRDQAYVGVLVDDLCTLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYR+FTSRAEYR+ LR DNAD RLTPI KLG I E R RF + I+ R L+S Sbjct: 423 KEPYRVFTSRAEYRLLLREDNADIRLTPIAHKLGLIDEARWARFNQKIENIELERQRLRS 482 Query: 481 LVLTSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 + L ++ + + + + L P+ + + L S+ P +E++ Sbjct: 483 IWLHPRSEYLEEANKVLGSPLVREANGEDLLRRPEMNYEILTSLTPYQPAMEDKEAVEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I Y Y Q E ++ K E IP FDY + LSNE++ KL +P ++ QAS Sbjct: 543 EIAIKYQGYIEHQEEEIEKQKRHENTEIPTQFDYVKVSGLSNEVRAKLEQHRPVSIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA++++L+ +KK + Sbjct: 603 RISGITPAAISIILVNLKKQGM 624 >gi|229515958|ref|ZP_04405415.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae TMA 21] gi|229347058|gb|EEO12020.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae TMA 21] Length = 631 Score = 802 bits (2071), Expect = 0.0, Method: Composition-based stats. Identities = 280/630 (44%), Positives = 385/630 (61%), Gaps = 6/630 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA AA+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHETFDVIVVGGGHAGTEAALAAARTGQRTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D GIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAQAIDHTGIQFRTLNASKGPAVRATRAQADRALYKAYVRNVLENTPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + I +V Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQAVDDVIVEHDHIRGVVTQMGLKFHAKAVVLTVGTFLGGKIHIGLENYAGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D ++ + E Q D FSFM + + RQI Sbjct: 182 ALAHRLRELPFRVDRLKTGTPPRIDANSVDFSVLEAQHGDNPTPVFSFMGKREHHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +++ HQIF+EPEG Sbjct: 242 CYITHTNERTHDVIRANLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADKDSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTTELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 IHGLFFAGQINGTTGYEEAAAQGLMAGLNASLYSQDKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG + + R RF + I R L+ Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLVDDARWVRFNQKIDNMAKERQRLQ 481 Query: 480 SLVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIER 535 + ++ ++ + + + L P+ + L ++ A + E+ Sbjct: 482 ETWMNPNSVGVEQLNTLLKTPMSREASGEDLLRRPEMTYDLLTTLPAFAPALEDAEAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y RQ E ++ E +P + DY + LSNE+ KL+ KP + A Sbjct: 542 VEIQVKYDGYIQRQQDEIEKSLRHEHTKLPAELDYKQVKGLSNEVVLKLNAAKPETIGIA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV-KLNEIV 624 S+I G+TPAA+++LL+++KK+ + K E Sbjct: 602 SRISGITPAAISILLVHLKKHGMLKKGEAA 631 >gi|238759548|ref|ZP_04620710.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Yersinia aldovae ATCC 35236] gi|238702207|gb|EEP94762.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Yersinia aldovae ATCC 35236] Length = 629 Score = 801 bits (2070), Expect = 0.0, Method: Composition-based stats. Identities = 294/619 (47%), Positives = 394/619 (63%), Gaps = 5/619 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA Sbjct: 6 QFDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLM D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 66 LGGLMAMATDQAGIQFRILNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQPV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + V Q R VVLT GTFL G IHIG GR GD PS SL Sbjct: 126 EDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPSISLSQ 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGIT 243 + RLKTGTP R+D +TI + + Q D + FSF+ + + Q+ C IT Sbjct: 186 RLRELPLRVNRLKTGTPPRIDARTIDFSQLAPQLGDTPIPVFSFLGNASQHPEQMACHIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 246 YTNEKTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNSHQIFLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q Q +R++ GLE IIRPGYAIEYD+ +P++L PTLE+K I GL Sbjct: 306 EIYPNGISTSLPFDVQMQIVRSMKGLENARIIRPGYAIEYDFFDPRDLKPTLESKYIQGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+ R +N D R ++Y+GV++DDL++ G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGLNAGRFANDEDGWSPRRDEAYLGVLVDDLSTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT +G KLG + + R F++ I++ R L+ + + Sbjct: 426 YRMFTSRAEYRLMLREDNADLRLTEMGRKLGLVNDARWAHFSQKIEKIEKERQRLRDIWV 485 Query: 484 TS--KNLSSTSISFK-QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIE 539 N+S + K K E L P+ + L ++ ++++I+ Sbjct: 486 HPYSDNVSEINALLKAPLSKEANGEELLRRPEIDYRLLTTLPSFGPALTDPQAADQVEIQ 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ E ++ E ++P D DY + LSNE+ KL+ KP ++ QAS+I Sbjct: 546 VKYEGYITRQQEEIEKQLRNENTVLPLDLDYRQVSGLSNEVIAKLNDHKPNSIGQASRIS 605 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+TPAA+++LL+++KK + Sbjct: 606 GITPAAISILLVWLKKQGL 624 >gi|126176558|ref|YP_001052707.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shewanella baltica OS155] gi|166200611|sp|A3DAS5|MNMG_SHEB5 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|125999763|gb|ABN63838.1| glucose inhibited division protein A [Shewanella baltica OS155] Length = 629 Score = 801 bits (2070), Expect = 0.0, Method: Composition-based stats. Identities = 288/622 (46%), Positives = 384/622 (61%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +DVIV+GGGHAG EAA AA++G+ T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 FHERFDVIVVGGGHAGTEAALAAARMGSKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M D AGIQFR LN KGPAVR R QADR LYR +Q + +Q NL + Q Sbjct: 63 IDALGGAMAIATDYAGIQFRTLNSSKGPAVRATRAQADRALYRQKIQNILQNQPNLRIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E + + +V Q VVLTTGTFL G IHIG GR GD P+ + Sbjct: 123 QAVDDLIVENHQVVGVVTQMGLAFESPAVVLTTGTFLSGKIHIGLENYSGGRAGDPPAIA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIEC 240 L N + GRLKTGTP R+D TI + + +Q D L SFM D + QI C Sbjct: 183 LANRLRELPIRVGRLKTGTPPRIDANTIDFSQMTEQKGDSPLPVMSFMGDVSHHPKQISC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH II + S +YSG I+ GPRYCPSIEDKI RF +++ HQIF+EPEGL Sbjct: 243 WITHTNEKTHEIIRGGLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKSSHQIFIEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 NT+ +YPNGIST+LP ++Q +R+I G+E I+RPGYAIEYDY +P++L +LETK I Sbjct: 303 NTNEIYPNGISTSLPFDVQLNLVRSIKGMENAEIMRPGYAIEYDYFDPRDLKNSLETKAI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 +GLF AGQINGTTGYEEA AQGL+AG+N++ + + C R ++Y+GV++DDL++ G Sbjct: 363 NGLFFAGQINGTTGYEEAGAQGLLAGMNASLQVQGKEAWCPRRDEAYLGVLVDDLSTLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT G +LG + + R F++ ++ L+ Sbjct: 423 KEPYRMFTSRAEYRLLLREDNADIRLTAKGRELGLVDDARWAAFSEKLESIELELQRLRG 482 Query: 481 LVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 + + +++ + + E L P+ L I E++ Sbjct: 483 QWVHPNSPLIHALNPHLNTPISREASFEELLRRPEMDYSKLMQIEGFGPGLEDPQAAEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 QI+ Y+ Y RQ E + E +P DY +P LSNE+ KL+ KP + QAS Sbjct: 543 QIQVKYSGYIQRQQEEINKAVRNENTGLPLTLDYKEVPGLSNEVIAKLNNHKPETIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA+++LL+++KK + Sbjct: 603 RISGITPAAISILLVHLKKRGL 624 >gi|56461730|ref|YP_157011.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Idiomarina loihiensis L2TR] gi|81170548|sp|Q5QZI8|MNMG_IDILO RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|56180740|gb|AAV83462.1| NAD/FAD-utilizing enzyme apparently involved in cell division [Idiomarina loihiensis L2TR] Length = 631 Score = 801 bits (2070), Expect = 0.0, Method: Composition-based stats. Identities = 289/621 (46%), Positives = 389/621 (62%), Gaps = 5/621 (0%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 + +DVIV+GGGHAG EAA AA+LG T L+TH T+G MSCNPAIGG+GKGHLV+EI Sbjct: 6 QQHFDVIVVGGGHAGTEAALAAARLGVKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEI 65 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G+M + AD AGIQFR LN KGPAVR R QADR+LY+ A++ + +Q NL + Q Sbjct: 66 DALGGVMAKAADKAGIQFRTLNSSKGPAVRATRAQADRQLYKQAIRYALETQPNLSIFQQ 125 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 E + ++ +V Q TVVLT GTFL G IHIG GR GD PSN+L Sbjct: 126 GCDDLIVENDRVTGVVTQMGLKFTAKTVVLTVGTFLGGQIHIGLDNYQGGRAGDPPSNAL 185 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECG 241 RLKTGTP R+ ++ + ++Q D FS+M + + Q I C Sbjct: 186 AKRLRALPLRVERLKTGTPPRIASHSVDFSVMQEQPGDNPTPVFSYMGSRSDHPQQIPCY 245 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT TN TH II + S +YSG I+ GPRYCPSIEDKIVRF ++ HQIF+EPEGLN Sbjct: 246 ITHTNENTHEIIRSGLDRSPMYSGVIEGVGPRYCPSIEDKIVRFADKGSHQIFVEPEGLN 305 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T +YPNGIST+LP ++Q + +++I G E +I RPGYAIEYDY +P++L +LETK I+ Sbjct: 306 TFEIYPNGISTSLPFDVQQRLVQSIKGFENAHITRPGYAIEYDYFDPRDLKQSLETKVIN 365 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQINGTTGYEEA AQGL+AG+N+A ++ + R +Y+GV+IDDL++ G Sbjct: 366 GLFFAGQINGTTGYEEAGAQGLIAGLNAALQAQDKESWAPRRDQAYMGVLIDDLSTLGTQ 425 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+ LR DNAD RLT IG LG + + R F K ++ + LK+ Sbjct: 426 EPYRMFTSRAEYRLLLREDNADMRLTEIGRNLGLVDDERWAAFNKKMESVEQEKQRLKTT 485 Query: 482 VLTSKNLSSTSISF---KQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQ 537 + + S I+ K + E L P+ ++L A L E+++ Sbjct: 486 WVHKDHASVEQINALVKSPVTKEVSGEELLRRPEIHYKDLALTDFFAPGLEDPLAAEQVE 545 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ YA Y RQ E + + E L+P FDY+ + LSNE+ KL+ +P + +A++ Sbjct: 546 IQIKYAGYITRQQEEIAKQQRHENTLLPSPFDYAKIKGLSNEVVAKLNDHQPETVGKAAR 605 Query: 598 IEGMTPAALNLLLIYIKKNTV 618 I G+TPAA+++LL+++KK + Sbjct: 606 ISGITPAAVSMLLVHLKKQGL 626 >gi|304412698|ref|ZP_07394301.1| glucose inhibited division protein A [Shewanella baltica OS183] gi|307305837|ref|ZP_07585583.1| glucose inhibited division protein A [Shewanella baltica BA175] gi|304348908|gb|EFM13323.1| glucose inhibited division protein A [Shewanella baltica OS183] gi|306911330|gb|EFN41756.1| glucose inhibited division protein A [Shewanella baltica BA175] Length = 629 Score = 801 bits (2070), Expect = 0.0, Method: Composition-based stats. Identities = 288/622 (46%), Positives = 384/622 (61%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +DVIV+GGGHAG EAA AA++G+ T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 FHERFDVIVVGGGHAGTEAALAAARMGSKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M D AGIQFR LN KGPAVR R QADR LYR +Q + +Q NL + Q Sbjct: 63 IDALGGAMAIATDYAGIQFRTLNSSKGPAVRATRAQADRALYRQKIQNILQNQPNLRIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E + + +V Q VVLTTGTFL G IHIG GR GD P+ + Sbjct: 123 QAVDDLIVENHQVVGVVTQMGLAFESPAVVLTTGTFLSGKIHIGLENYSGGRAGDPPAIA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIEC 240 L N + GRLKTGTP R+D TI + + +Q D L SFM D + QI C Sbjct: 183 LANRLRELPIRVGRLKTGTPPRIDANTIDFSQMTEQKGDSPLPVMSFMGDVSHHPKQISC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH II + S +YSG I+ GPRYCPSIEDKI RF +++ HQIF+EPEGL Sbjct: 243 WITHTNEKTHEIIRGGLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKSSHQIFIEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 NT+ +YPNGIST+LP ++Q +R+I G+E I+RPGYAIEYDY +P++L +LETK I Sbjct: 303 NTNEIYPNGISTSLPFDVQLNLVRSIKGMENAEIMRPGYAIEYDYFDPRDLKNSLETKAI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 +GLF AGQINGTTGYEEA AQGL+AG+N++ + + C R ++Y+GV++DDL++ G Sbjct: 363 NGLFFAGQINGTTGYEEAGAQGLLAGMNASLQVQGKEAWCPRRDEAYLGVLVDDLSTLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT G +LG + + R F++ ++ L+ Sbjct: 423 KEPYRMFTSRAEYRLLLREDNADIRLTAKGRELGLVDDTRWAAFSEKLESIELELQRLRG 482 Query: 481 LVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 + + +++ + + E L P+ L I E++ Sbjct: 483 QWVHPNSPLIHALNPHLNTPISREASFEELLRRPEMDYSKLMQIEGFGPGLEDPQAAEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 QI+ Y+ Y RQ E + E +P DY +P LSNE+ KL+ KP + QAS Sbjct: 543 QIQVKYSGYIQRQQEEINKAVRNENTGLPLTLDYKEVPGLSNEVIAKLNNHKPETIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA+++LL+++KK + Sbjct: 603 RISGITPAAISILLVHLKKRGL 624 >gi|90415383|ref|ZP_01223317.1| Glucose-inhibited division protein A subfamily protein [marine gamma proteobacterium HTCC2207] gi|90332706|gb|EAS47876.1| Glucose-inhibited division protein A subfamily protein [marine gamma proteobacterium HTCC2207] Length = 622 Score = 801 bits (2069), Expect = 0.0, Method: Composition-based stats. Identities = 286/618 (46%), Positives = 395/618 (63%), Gaps = 5/618 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 S+DVIV+GGGHAG EA AA++G+ T L+TH T+G MSCNPAIGG+GK HLV+EIDA Sbjct: 6 SFDVIVVGGGHAGTEACLAAARMGSKTLLLTHNIETLGQMSCNPAIGGIGKTHLVKEIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M + D GIQFRVLN +KGPAVR R QADR LY+ A+ + +Q+NL + Q V Sbjct: 66 LGGAMAKATDLGGIQFRVLNSRKGPAVRATRAQADRVLYKAAILEILQNQQNLTLFQQAV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ +V Q + TVV+T GTFL G IHIG AGR GD P+ +L Sbjct: 126 DDLILEGDSVTGVVTQMGLTFKAKTVVVTAGTFLAGKIHIGMENYSAGRAGDPPALNLSQ 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGIT 243 F RLKTGTP R+D +++ + + +Q+ D+ S++ + Q C IT Sbjct: 186 RLRSLPFRVERLKTGTPPRIDARSVDFSQLPEQWGDQPEPVMSYLGSVTQHPKQTCCWIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH II + S +Y+G I GPRYCPSIEDK+VRF ++N HQIF+EPEGLNT Sbjct: 246 YTNSQTHDIIKGGMDRSPLYTGVIDGVGPRYCPSIEDKVVRFADKNQHQIFIEPEGLNTY 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q +R+I G E +I RPGYAIEYDY NP++L +LETK + GL Sbjct: 306 ELYPNGISTSLPFDVQLSLVRSIVGFENAHITRPGYAIEYDYFNPQDLKYSLETKSVKGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG N+A + + C R ++YIGV++DDL + G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGTNAALQVQGRESWCPRRDEAYIGVLVDDLITMGTTEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT G +LG + + R K+F+ + R LKS + Sbjct: 426 YRMFTSRAEYRLLLREDNADMRLTEKGRELGLVDDDRWKQFSDKREAIELERQRLKSTWI 485 Query: 484 TSKNLSSTSIS---FKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + ++ +S + + +E L P+ + + S+ P+ + + E+++I++ Sbjct: 486 QPTSDTAEKLSAHIENKLSHEYSLFELLKRPEIDYKIIGSLYPE-HQVEHKIAEQVEIDA 544 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y+ Y RQ E ++ E IP +F+Y S+ LSNE+K+KLS P L +A +I G Sbjct: 545 KYSGYIIRQQDEVNRLRRHENTRIPVNFNYQSVKGLSNEVKQKLSEATPETLARAGRIPG 604 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA++LL++ +KK+ Sbjct: 605 VTPAAISLLIVQLKKHAA 622 >gi|332533707|ref|ZP_08409566.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudoalteromonas haloplanktis ANT/505] gi|332036871|gb|EGI73332.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudoalteromonas haloplanktis ANT/505] Length = 629 Score = 801 bits (2069), Expect = 0.0, Method: Composition-based stats. Identities = 289/623 (46%), Positives = 398/623 (63%), Gaps = 5/623 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA AA++G +T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 IFHENFDVIVVGGGHAGTEAALAAARMGMNTLLLTHNMDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G M + D GIQFR LN KGPAVR R QADR LY+ A+Q + +Q+NL + Sbjct: 62 EIDALGGAMAQAIDKGGIQFRTLNSSKGPAVRATRAQADRALYKAAIQTTLQNQDNLKIF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q E + ++ +V Q +VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQSCDDLIVENDRVTGVVTQMGLRFSAPSVVLTVGTFLGGQIHIGLENYKGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IE 239 +L + F RLKTGTP R+D +T+ + K E Q D FSFM + + Q I Sbjct: 182 ALAERLREHPFRVDRLKTGTPPRIDARTVDFTKMEAQPGDMPTPVFSFMGKQSDHPQQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I +N+ S +YSG I+ GPRYCPSIEDKIVRF +++ HQIF+EPEG Sbjct: 242 CYITYTNEKTHDVIRKNLHRSPMYSGVIEGIGPRYCPSIEDKIVRFADKDKHQIFVEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L + +YPNGIST+LP ++Q + +++I G E +I RPGYAIEYDY +P++L +LETK Sbjct: 302 LTSYELYPNGISTSLPFDVQLEIVQSISGFENAHICRPGYAIEYDYFDPRDLKQSLETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEA AQGL+AG+N+A K D R ++Y+GV+IDDL + G Sbjct: 362 IEGLFFAGQINGTTGYEEAGAQGLIAGMNAALKVQGKDSWTPRRDEAYVGVLIDDLATLG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT G +LG + + R + F + ++ + +K Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADIRLTEKGRELGLVNDERWQAFNEKMEVIEKEKQRIK 481 Query: 480 SLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIER 535 + ++ ++ + + E L P+ +L +I +F++ +E+ Sbjct: 482 DTWIHKDHVVVDQVNALLKTPLTREASLEELLRRPEIRYNDLMAIDGLGSEFTNVAALEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I + YA Y RQ E + E+ ++PK+FDY ++ LSNE+ KL +P + QA Sbjct: 542 VEIHTKYAGYIARQQDEINKQLRHEQTILPKEFDYKTVSGLSNEVVAKLIESRPDTIGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV 618 S+I G+TPAA++LLL+Y+KK + Sbjct: 602 SRISGITPAAISLLLVYLKKQGL 624 >gi|326564668|gb|EGE14886.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Moraxella catarrhalis 46P47B1] Length = 632 Score = 801 bits (2069), Expect = 0.0, Method: Composition-based stats. Identities = 298/626 (47%), Positives = 396/626 (63%), Gaps = 8/626 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 +++DVIVIGGGHAG EA AA++GA+T LITH T+G MSCNPAIGG+GK HLVRE+D Sbjct: 10 KTFDVIVIGGGHAGTEACLAAARMGANTLLITHNIETLGQMSCNPAIGGIGKSHLVREVD 69 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D AGIQFRVLN +KG AVR R QADR LY+ A++ + +Q NL + Q Sbjct: 70 ALGGAMALATDKAGIQFRVLNSRKGAAVRATRAQADRILYKAAIRHTLENQPNLTIFQQS 129 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E ++V + VVLT+GTFL GVIH+G GR GD P+ L Sbjct: 130 VDDIIVENTRAVAVVTATGIRLNTRAVVLTSGTFLGGVIHVGLDHQSGGRAGDMPAIHLA 189 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + + GRLKTGTPAR+D +T+ + Q D L S+M D + RQI C I Sbjct: 190 DRLRELKLPVGRLKTGTPARIDARTVDFSVMTVQSGDTPLPVMSYMGDVAMHPRQINCYI 249 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II N+ S ++SG I+ GPRYCPSIEDKI RF +++ HQIF+EPEGL T Sbjct: 250 THTNERTHEIIRANLDRSPMFSGKIEGVGPRYCPSIEDKIHRFADKDSHQIFIEPEGLTT 309 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNGIST+LP ++Q +FI ++ GLE +I RPGYAIEYDY +P+ L PTLETK I Sbjct: 310 HELYPNGISTSLPFDVQLEFIHSMKGLENAHITRPGYAIEYDYFDPQNLKPTLETKSIDA 369 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQINGTTGYEEAAAQGL+AG+N+AR + R ++Y+GV++DDL + G E Sbjct: 370 LYFAGQINGTTGYEEAAAQGLLAGLNAARMALDEPSWVPQRHEAYLGVLVDDLITHGTKE 429 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAE+R+ LR DNAD RLT IG +LG + + R RF++ ++ + LK + Sbjct: 430 PYRMFTSRAEHRLILREDNADARLTAIGRELGLVDDERWARFSQKMESIASETARLKDIW 489 Query: 483 LTSKNLSSTSISFKQ---DGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 T N K + + L P+ + ++ + S+ V E+++I Sbjct: 490 ATPNNAIGQDFMANTGEILTKENSLLDLLKRPNITFDDIAKV--SDSTVSAKVGEQIEIS 547 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ E +++K E L+P DFDY S+ LSNE+ +KLS ++P L QAS+I Sbjct: 548 VKYQGYIERQNDEIEQMKRLENTLLPLDFDYKSVSGLSNEIVQKLSQIRPTTLGQASRIS 607 Query: 600 GMTPAALNLLLIYIKKNTVKLNEIVL 625 G+TPAA++LL + IKK +K + V+ Sbjct: 608 GVTPAAVSLLAMTIKK--LKKTQAVM 631 >gi|116053716|ref|YP_794043.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas aeruginosa UCBPP-PA14] gi|218894668|ref|YP_002443538.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas aeruginosa LESB58] gi|254237761|ref|ZP_04931084.1| glucose-inhibited division protein A [Pseudomonas aeruginosa C3719] gi|254243110|ref|ZP_04936432.1| glucose-inhibited division protein A [Pseudomonas aeruginosa 2192] gi|122256264|sp|Q02DE3|MNMG_PSEAB RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|226704796|sp|B7V7A2|MNMG_PSEA8 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|115588937|gb|ABJ14952.1| glucose-inhibited division protein A [Pseudomonas aeruginosa UCBPP-PA14] gi|126169692|gb|EAZ55203.1| glucose-inhibited division protein A [Pseudomonas aeruginosa C3719] gi|126196488|gb|EAZ60551.1| glucose-inhibited division protein A [Pseudomonas aeruginosa 2192] gi|218774897|emb|CAW30715.1| glucose-inhibited division protein A [Pseudomonas aeruginosa LESB58] Length = 630 Score = 801 bits (2069), Expect = 0.0, Method: Composition-based stats. Identities = 293/616 (47%), Positives = 382/616 (62%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FDVIVIGGGHAGTEAALAAARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAEATDKGGIQFRILNSRKGPAVRATRAQADRVLYKAAIRHTLENQPNLWIFQQACD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 127 DLIVEQDQVRGVVTQMGLRFHADNVVLTTGTFLGGLIHIGLENYSGGRAGDPPSIALARR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ K + Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGSKEQHPEQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+FLEPEGL T Sbjct: 247 TNARTHEIIAANLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFLEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R+I G+E +I+RPGYAIEYD+ +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVRSIRGMENAHIVRPGYAIEYDFFDPRDLRYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A +S D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGANAALRSQGKDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + +RR F + LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDRRWAAFEAKREGIEREEQRLKSTWVR 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +I+ + LS P+ L I DA + V E+++I + Sbjct: 487 PNTPQGDAIAERFGTPLTHEYNLLNLLSRPEIDYAGLVEITGDAVD-NPQVAEQVEIRTK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E ++ E +P D DY + LS E++ KL+ +P L QAS+I G+ Sbjct: 546 YAGYIDRQQEEIARLRASEDTRLPVDIDYLGISGLSKEIQNKLNQARPETLGQASRIPGV 605 Query: 602 TPAALNLLLIYIKKNT 617 TPAA++LLLI++KK Sbjct: 606 TPAAISLLLIHLKKRA 621 >gi|121730055|ref|ZP_01682464.1| glucose inhibited division protein A [Vibrio cholerae V52] gi|121628204|gb|EAX60727.1| glucose inhibited division protein A [Vibrio cholerae V52] Length = 631 Score = 801 bits (2069), Expect = 0.0, Method: Composition-based stats. Identities = 281/630 (44%), Positives = 386/630 (61%), Gaps = 6/630 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA AA+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHETFDVIVVGGGHAGTEAALAAARTGQRTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D AGIQFR LN KGPAVR R QADR LY+ + + + NL + Sbjct: 62 EVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVCNVLENTPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + I +V Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQAVDDVIVEHDHIRGVVTQMGLKFHAKAVVLTVGTFLGGKIHIGLENYAGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D ++ + E Q D FSFM + + RQI Sbjct: 182 ALAHRLRELPFRVDRLKTGTPPRIDANSVDFSVLEAQHGDNPTPVFSFMGKREHHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +++ HQIF+EPEG Sbjct: 242 CYITHTNERTHDVIRANLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADKDSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTTELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 IHGLFFAGQINGTTGYEEAAAQGLMAGLNASLYSQDKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG + + R RF + I R L+ Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLVDDARWARFNQKIDNMAKERQRLQ 481 Query: 480 SLVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIER 535 + ++ ++ + + + L P+ + + L ++ A + E+ Sbjct: 482 ETWMNPNSVGVEQLNTLLKTPMSREASGEDLLRRPEMTYELLTTLPAFAPALEDAEAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y RQ E ++ E +P + DY + LSNE+ KL+ KP + A Sbjct: 542 VEIQVKYDGYIQRQQDEIEKSLRHEHTKLPAELDYKQVKGLSNEVVLKLNAAKPETIGIA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV-KLNEIV 624 S+I G+TPAA+++LL+++KK+ + K E Sbjct: 602 SRISGITPAAISILLVHLKKHGMLKKGEAA 631 >gi|327485243|gb|AEA79650.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Vibrio cholerae LMA3894-4] Length = 631 Score = 801 bits (2069), Expect = 0.0, Method: Composition-based stats. Identities = 281/630 (44%), Positives = 387/630 (61%), Gaps = 6/630 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA AA+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHETFDVIVVGGGHAGTEAALAAARTGQRTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRNVLENTPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + I +V Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQAVDDVIVEHDHIRGVVTQMGLKFHAKAVVLTVGTFLGGKIHIGLENYAGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D ++ + E Q D FSFM + + RQI Sbjct: 182 ALAHRLRELPFRVDRLKTGTPPRIDANSVDFSVLEAQHGDNPTPVFSFMGKREHHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +++ HQIF+EPEG Sbjct: 242 CYITHTNERTHDVIRANLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADKDSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTTELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 IHGLFFAGQINGTTGYEEAAAQGLMAGLNASLYSQDKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG + + R RF + I R L+ Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLVDDARWVRFNQKIDNMAKERQRLQ 481 Query: 480 SLVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIER 535 + ++ ++ + + + L P+ + + L ++ A + E+ Sbjct: 482 ETWMNPNSVGVEQLNTLLKTPMSREASGEDLLRRPEMTYELLTTLPAFAPALEDAEAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y RQ E ++ E +P + DY + LSNE+ KL+ KP + A Sbjct: 542 VEIQVKYDGYIQRQQDEIEKSLRHEHTKLPAELDYKQVKGLSNEVVLKLNAAKPETIGIA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV-KLNEIV 624 S+I G+TPAA+++LL+++KK+ + K E Sbjct: 602 SRISGITPAAISILLVHLKKHGMLKKGEAA 631 >gi|326559567|gb|EGE09981.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Moraxella catarrhalis 7169] Length = 632 Score = 801 bits (2069), Expect = 0.0, Method: Composition-based stats. Identities = 298/626 (47%), Positives = 396/626 (63%), Gaps = 8/626 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 +++DVIVIGGGHAG EA AA++GA+T LITH T+G MSCNPAIGG+GK HLVRE+D Sbjct: 10 KTFDVIVIGGGHAGTEACLAAARMGANTLLITHNIETLGQMSCNPAIGGIGKSHLVREVD 69 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D AGIQFRVLN +KG AVR R QADR LY+ A++ + +Q NL + Q Sbjct: 70 ALGGAMALATDKAGIQFRVLNSRKGAAVRATRAQADRILYKAAIRHTLENQPNLTIFQQS 129 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E ++V + VVLT+GTFL GVIH+G GR GD P+ L Sbjct: 130 VDDIIVENTRAVAVVTATGIRLNTRAVVLTSGTFLGGVIHVGLDHQSGGRAGDMPAIRLA 189 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + + GRLKTGTPAR+D +T+ + Q D L S+M D + RQI C I Sbjct: 190 DRLRELKLPVGRLKTGTPARIDARTVDFSVMTVQSGDTPLPVMSYMGDVAMHPRQINCYI 249 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II N+ S ++SG I+ GPRYCPSIEDKI RF +++ HQIF+EPEGL T Sbjct: 250 THTNERTHEIIRANLDRSPMFSGKIEGVGPRYCPSIEDKIHRFADKDSHQIFIEPEGLTT 309 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNGIST+LP ++Q +FI ++ GLE +I RPGYAIEYDY +P+ L PTLETK I Sbjct: 310 HELYPNGISTSLPFDVQLEFIHSMKGLENAHITRPGYAIEYDYFDPQNLKPTLETKSIDA 369 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQINGTTGYEEAAAQGL+AG+N+AR + R ++Y+GV++DDL + G E Sbjct: 370 LYFAGQINGTTGYEEAAAQGLLAGLNAARMALDEPSWVPQRHEAYLGVLVDDLITHGTKE 429 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAE+R+ LR DNAD RLT IG +LG + + R RF++ ++ + LK + Sbjct: 430 PYRMFTSRAEHRLILREDNADARLTAIGRELGLVDDERWARFSQKMESIASETARLKDIW 489 Query: 483 LTSKNLSSTSISFKQ---DGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 T N K + + L P+ + ++ + S+ V E+++I Sbjct: 490 ATPNNAIGQDFMVNTGEILTKENSLLDLLKRPNITFDDIAKV--SDSTVSAKVGEQIEIS 547 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ E +++K E L+P DFDY S+ LSNE+ +KLS ++P L QAS+I Sbjct: 548 VKYQGYIERQNDEIEQMKRLENTLLPLDFDYKSVSGLSNEIVQKLSQIRPTTLGQASRIS 607 Query: 600 GMTPAALNLLLIYIKKNTVKLNEIVL 625 G+TPAA++LL + IKK +K + V+ Sbjct: 608 GVTPAAVSLLAMTIKK--LKKTQAVM 631 >gi|217975459|ref|YP_002360210.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shewanella baltica OS223] gi|254811519|sp|B8EDW1|MNMG_SHEB2 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|217500594|gb|ACK48787.1| glucose inhibited division protein A [Shewanella baltica OS223] Length = 629 Score = 801 bits (2069), Expect = 0.0, Method: Composition-based stats. Identities = 288/622 (46%), Positives = 384/622 (61%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +DVIV+GGGHAG EAA AA++G+ T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 FHERFDVIVVGGGHAGTEAALAAARMGSKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M D AGIQFR LN KGPAVR R QADR LYR +Q + +Q NL + Q Sbjct: 63 IDALGGAMAIATDYAGIQFRTLNSSKGPAVRATRAQADRALYRQKIQNILQNQPNLRIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E + + +V Q VVLTTGTFL G IHIG GR GD P+ + Sbjct: 123 QAVDDLIVENHQVVGVVTQMGLAFESPAVVLTTGTFLSGKIHIGLENYSGGRAGDPPAIA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIEC 240 L N + GRLKTGTP R+D TI + + +Q D L SFM D + QI C Sbjct: 183 LANRLRELPIRVGRLKTGTPPRIDANTIDFSQMAEQKGDSPLPVMSFMGDVSHHPKQISC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH II + S +YSG I+ GPRYCPSIEDKI RF +++ HQIF+EPEGL Sbjct: 243 WITHTNEKTHEIIRGGLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKSSHQIFIEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 NT+ +YPNGIST+LP ++Q +R+I G+E I+RPGYAIEYDY +P++L +LETK I Sbjct: 303 NTNEIYPNGISTSLPFDVQLNLVRSIKGMENAEIMRPGYAIEYDYFDPRDLKNSLETKAI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 +GLF AGQINGTTGYEEA AQGL+AG+N++ + + C R ++Y+GV++DDL++ G Sbjct: 363 NGLFFAGQINGTTGYEEAGAQGLLAGMNASLQVQGKEAWCPRRDEAYLGVLVDDLSTLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT G +LG + + R F++ ++ L+ Sbjct: 423 KEPYRMFTSRAEYRLLLREDNADIRLTAKGRELGLVDDARWAAFSEKLESIELELQRLRG 482 Query: 481 LVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 + + +++ + + E L P+ L I E++ Sbjct: 483 QWVHPNSPLIHALNPHLNTPISREASFEELLRRPEMDYSKLMQIEGFGPGLEDPQAAEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 QI+ Y+ Y RQ E + E +P DY +P LSNE+ KL+ KP + QAS Sbjct: 543 QIQVKYSGYIQRQQEEINKAVRNENTGLPLTLDYKEVPGLSNEVIAKLNNHKPETIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA+++LL+++KK + Sbjct: 603 RISGITPAAISILLVHLKKRGL 624 >gi|192359013|ref|YP_001984271.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Cellvibrio japonicus Ueda107] gi|238692448|sp|B3PIT8|MNMG_CELJU RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|190685178|gb|ACE82856.1| glucose-inhibited division protein A [Cellvibrio japonicus Ueda107] Length = 638 Score = 801 bits (2069), Expect = 0.0, Method: Composition-based stats. Identities = 287/617 (46%), Positives = 396/617 (64%), Gaps = 5/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EA AA++G T L++H T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FDVIVIGGGHAGTEACLAAARMGCKTLLLSHNIETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 67 GGAMALATDKGGIQFRVLNARKGPAVRATRAQADRILYKAAIRHTLENQPNLWIFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q VVLT GTFL G+IHIG GR GD PS +L Sbjct: 127 DLIVEQDQVRGVVTQMGLKFMADQVVLTAGTFLGGLIHIGLENYSGGRAGDPPSIALSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK-ITNRQIECGITR 244 + RLKTGTP R+D +T+ +D EKQ+ DE S ++ + QI C IT Sbjct: 187 LRELPLRVDRLKTGTPPRIDARTVNFDLLEKQWGDEPRPVMSVRGNRAMQPPQICCYITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH +I N+ S +YSG I+ GPRYCPSIEDKI RF +++ HQ+F+EPEGL T Sbjct: 247 TNERTHEVIRNNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKDSHQVFIEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ NP++L +LET+ I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVRSMRGFENAHILRPGYAIEYDFFNPQDLQHSLETRVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AGIN+A ++ C +R +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGINAALRAQGKAAWCPTRDQAYMGVLVDDLITLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG IG+ + + F + ++ + LKS + Sbjct: 427 RMFTSRAEYRLLLREDNADLRLTEKGRELGLIGDEQWQLFCEKREQIALEQQRLKSTWIQ 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 + + + I K + + + + L P+ + ++ S+ + E+++IE+ Sbjct: 487 AGSAEAEQIEAKINVRLAREYSLMDLLKRPELNYADVASLKGEPLA-GEAAAEQVEIEAK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ + ++ E LIP+D DY+ + LSNE+K+KLS +P L +A++I G+ Sbjct: 546 YAGYIDRQQDDINRLRAYENTLIPEDLDYAQVEGLSNEVKQKLSAARPQTLARAARISGI 605 Query: 602 TPAALNLLLIYIKKNTV 618 TPAA++L+L+Y+KK + Sbjct: 606 TPAAISLVLVYLKKRGL 622 >gi|296392432|ref|ZP_06881907.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas aeruginosa PAb1] Length = 630 Score = 801 bits (2069), Expect = 0.0, Method: Composition-based stats. Identities = 293/616 (47%), Positives = 382/616 (62%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FDVIVIGGGHAGTEAALAAARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAEATDKGGIQFRILNSRKGPAVRATRAQADRVLYKAAIRHTLENQPNLWIFQQACD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 127 DLIVEQDQVRGVVTQMGLRFHADNVVLTTGTFLGGLIHIGLENYSGGRAGDPPSIALARR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ K + Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGSKEQHPEQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+FLEPEGL T Sbjct: 247 TNARTHEIIAANLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFLEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R+I G+E +I+RPGYAIEYD+ +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVRSIRGMENAHIVRPGYAIEYDFFDPRDLRYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A +S D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGANAALRSQGKDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + +RR F + LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDRRWAAFVAKREGIEREEQRLKSTWVR 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +I+ + LS P+ L I DA + V E+++I + Sbjct: 487 PNTPQGDAIAERFGTPLTHEYNLLNLLSRPEIDYAGLVEITGDAVD-NPQVAEQVEIRTK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E ++ E +P D DY + LS E++ KL+ +P L QAS+I G+ Sbjct: 546 YAGYIDRQQEEIARLRASEDTRLPVDIDYLGISGLSKEIQNKLNQARPETLGQASRIPGV 605 Query: 602 TPAALNLLLIYIKKNT 617 TPAA++LLLI++KK Sbjct: 606 TPAAISLLLIHLKKRA 621 >gi|113461841|ref|YP_719910.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Haemophilus somnus 129PT] gi|123327492|sp|Q0I5W4|MNMG_HAES1 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|112823884|gb|ABI25973.1| glucose-inhibited division protein A [Haemophilus somnus 129PT] Length = 629 Score = 801 bits (2068), Expect = 0.0, Method: Composition-based stats. Identities = 298/622 (47%), Positives = 394/622 (63%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +YDVIVIGGGHAG EAA A++ T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 YTENYDVIVIGGGHAGTEAALATARMKLKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDA+ GLM AD AGIQFR LN KGPAVR R QADR LYR ++ + +Q NLD+ Q Sbjct: 63 IDAMGGLMATAADKAGIQFRTLNSSKGPAVRATRAQADRVLYRQVVRIALENQPNLDIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 EV EK+ ++ I + R +VVLT GTFL G IHIG GR GD S + Sbjct: 123 QEVTDIILEKDSVTGIETKMGLKFRAKSVVLTAGTFLAGKIHIGLENYAGGRAGDPASVN 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIEC 240 L + RLKTGTP R+D +TI +D KQ+ DE+L FSFM + QI C Sbjct: 183 LAKKLRDLNLRVNRLKTGTPPRIDARTINFDILAKQYGDEKLPVFSFMGSVEQHPEQIPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH +I +N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPEGL Sbjct: 243 YITHTNDQTHDVIRKNLDRSPMYTGVIEGIGPRYCPSIEDKVIRFSDRNSHQIYLEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 ++ VYPNGIST+LP ++Q + + ++ GLEK I++PGYAIEYDY +P++L TLETK I Sbjct: 303 TSNEVYPNGISTSLPFDVQMKIVNSMKGLEKARIVKPGYAIEYDYFDPRDLKSTLETKAI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 SGLF AGQINGTTGYEEAAAQGL+AGIN+ + + R +YIGV++DDL + G Sbjct: 363 SGLFFAGQINGTTGYEEAAAQGLLAGINAGLFVQEKESWFPRRDQAYIGVLVDDLCTVGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYR+FTSRAEYR+ LR DNAD RLT I KLG I + R RF + ++ R L+S Sbjct: 423 KEPYRVFTSRAEYRLLLREDNADIRLTSIARKLGLIDDIRWARFNQKMENIELERQRLRS 482 Query: 481 LVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 + L ++ + I + + L P+ + Q L ++ P +E++ Sbjct: 483 IWLHPRSEYLNEANEILKSPLIREVNGEDLLRRPEINYQILTALTPFKPAMEDKEAVEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I Y Y Q E + K E IP +FDY ++ LSNE+ KL +P ++ QAS Sbjct: 543 EIAIKYQGYIEHQQEEIERQKRHENTAIPANFDYKNISGLSNEVCAKLEQYRPISIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA+++LL+ +KK + Sbjct: 603 RISGITPAAISILLVNLKKQGM 624 >gi|153803600|ref|ZP_01958186.1| glucose inhibited division protein A [Vibrio cholerae MZO-3] gi|124120865|gb|EAY39608.1| glucose inhibited division protein A [Vibrio cholerae MZO-3] Length = 631 Score = 801 bits (2068), Expect = 0.0, Method: Composition-based stats. Identities = 281/630 (44%), Positives = 386/630 (61%), Gaps = 6/630 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA AA+ G T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 LYHETFDVIVVGGGHAGTEAALAAARTGQRTLLLTHNIDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ GLM + D AGIQFR LN KGPAVR R QADR LY+ ++ + + NL + Sbjct: 62 EVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRNVLENTPNLTLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + I +V Q VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQAVDDVIVEHDHIRGVVTQMGLKFHAKAVVLTVGTFLGGKIHIGLENYAGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 +L + + F RLKTGTP R+D ++ + E Q D FSFM + + RQI Sbjct: 182 ALAHRLRELPFRVDRLKTGTPPRIDANSVDFSVLEAQHGDNPTPVFSFMGKREHHPRQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +++ HQIF+EPEG Sbjct: 242 CYITHTNERTHDVIRANLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADKDSHQIFIEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK Sbjct: 302 LTTTELYPNGISTSLPFDVQMQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKY 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG+N++ S + R +Y+GV+IDDL++ G Sbjct: 362 IHGLFFAGQINGTTGYEEAAAQGLMAGLNASLYSQDKEGWSPRRDQAYMGVLIDDLSTMG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT +LG + + R RF + I R L+ Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLVDDARWVRFNQKIDNMAKERQRLQ 481 Query: 480 SLVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIER 535 + ++ ++ + + + L P+ + L ++ A + E+ Sbjct: 482 ETWMNPNSVGVEQLNTLLKTPMSREASGEDLLRRPEMTYDLLTTLPAFAPALEDAEAAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I+ Y Y RQ E ++ E +P + DY + LSNE+ KL+ KP + A Sbjct: 542 VEIQVKYDGYIQRQQDEIEKSLRHEHTKLPAELDYKQVKGLSNEVVLKLNAAKPETIGIA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV-KLNEIV 624 S+I G+TPAA+++LL+++KK+ + K E Sbjct: 602 SRISGITPAAISILLVHLKKHGMLKKGEAA 631 >gi|170729227|ref|YP_001763253.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shewanella woodyi ATCC 51908] gi|205831557|sp|B1KQ45|MNMG_SHEWM RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|169814574|gb|ACA89158.1| glucose inhibited division protein A [Shewanella woodyi ATCC 51908] Length = 630 Score = 801 bits (2068), Expect = 0.0, Method: Composition-based stats. Identities = 288/622 (46%), Positives = 385/622 (61%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +DVIVIGGGHAG EAA AA++G+ T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 FHERFDVIVIGGGHAGTEAALAAARMGSKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M D AGIQFR LN KGPAVR R QADR LYR +Q + +Q NL + Q Sbjct: 63 IDALGGAMAIATDYAGIQFRTLNSSKGPAVRATRAQADRALYRAKIQEILQNQPNLRLFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E ++ +V Q VVLT GTFL G IHIG GR GD PS + Sbjct: 123 QAVDDLIVENGRVTGVVTQMGLAFEAPAVVLTAGTFLSGKIHIGMQNYSGGRAGDPPSIA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIEC 240 L + + GRLKTGTP R+D TI +D +Q D L SF+ D + QI C Sbjct: 183 LADRLRELPIRIGRLKTGTPPRIDANTINFDLMTEQKGDTPLPVMSFIGDVSQHPKQISC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +T TN +TH II + S +YSG I+ GPRYCPSIEDKI RF +++ HQIF+EPEGL Sbjct: 243 FVTHTNEKTHDIIRGGLDRSPMYSGVIEGVGPRYCPSIEDKIHRFADKSSHQIFIEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 NT+ +YPNGIST+LP ++Q +R+I G+E IIRPGYAIEYDY +P++L +LETK I Sbjct: 303 NTNEIYPNGISTSLPFDVQLNLVRSIKGMENAEIIRPGYAIEYDYFDPRDLKNSLETKSI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQINGTTGYEEA AQGL+AG+N++ + + C R ++Y+GV++DDL++ G Sbjct: 363 DGLFFAGQINGTTGYEEAGAQGLLAGMNASLQVQGKEIWCPRRDEAYLGVLVDDLSTLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT G ++G + + R +F++ + L+S Sbjct: 423 KEPYRMFTSRAEYRLLLREDNADLRLTEKGREIGLVDDERWAKFSEKRESIELELQRLRS 482 Query: 481 LVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 + + ++ + + + + L P+ L S+ E++ Sbjct: 483 QWVHPNSPLIDVLNPELNTPISREASFEDLLRRPEMDYPKLMSLEGFGPGLDDPRAAEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 QI+ Y+ Y RQ E + E +P D DY +P LSNE+ KL+ KP + QAS Sbjct: 543 QIQVKYSGYIQRQQDEIDKAIRHETTGLPLDLDYQEVPGLSNEVIAKLNDHKPETIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I GMTPAA+++LL+++K+ + Sbjct: 603 RISGMTPAAISILLVHLKRRGL 624 >gi|153002872|ref|YP_001368553.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shewanella baltica OS185] gi|166200612|sp|A6WUK1|MNMG_SHEB8 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|151367490|gb|ABS10490.1| glucose inhibited division protein A [Shewanella baltica OS185] Length = 629 Score = 801 bits (2068), Expect = 0.0, Method: Composition-based stats. Identities = 288/622 (46%), Positives = 384/622 (61%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +DVIV+GGGHAG EAA AA++G+ T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 FHERFDVIVVGGGHAGTEAALAAARMGSKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M D AGIQFR LN KGPAVR R QADR LYR +Q + +Q NL + Q Sbjct: 63 IDALGGAMAIATDYAGIQFRTLNSSKGPAVRATRAQADRALYRQKIQNILQNQPNLRIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E + + +V Q VVLTTGTFL G IHIG GR GD P+ + Sbjct: 123 QAVDDLIVENHQVVGVVTQMGLAFESPAVVLTTGTFLSGKIHIGLENYSGGRAGDPPAIA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIEC 240 L N + GRLKTGTP R+D TI + + +Q D L SFM D + QI C Sbjct: 183 LANRLRELPIRVGRLKTGTPPRIDANTIDFSQMTEQKGDSPLPVMSFMGDVSHHPKQISC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH II + S +YSG I+ GPRYCPSIEDKI RF +++ HQIF+EPEGL Sbjct: 243 WITHTNEKTHEIIRGGLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKSSHQIFIEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 NT+ +YPNGIST+LP ++Q +R+I G+E I+RPGYAIEYDY +P++L +LETK I Sbjct: 303 NTNEIYPNGISTSLPFDVQLNLVRSIKGMENAEIMRPGYAIEYDYFDPRDLKNSLETKAI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 +GLF AGQINGTTGYEEA AQGL+AG+N++ + + C R ++Y+GV++DDL++ G Sbjct: 363 NGLFFAGQINGTTGYEEAGAQGLLAGMNASLQVQGKEAWCPRRDEAYLGVLVDDLSTLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT G +LG + + R F++ ++ L+ Sbjct: 423 KEPYRMFTSRAEYRLLLREDNADIRLTAKGRELGLVDDARWAEFSEKLESIELELQRLRG 482 Query: 481 LVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 + + +++ + + E L P+ L I E++ Sbjct: 483 QWVHPNSPLIHALNPHLNTPISREASFEELLRRPEMDYSKLMQIEGFGPGLEDPQAAEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 QI+ Y+ Y RQ E + E +P DY +P LSNE+ KL+ KP + QAS Sbjct: 543 QIQVKYSGYIQRQQEEINKAVRNENTGLPLTLDYKEVPGLSNEVIAKLNNHKPETIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA+++LL+++KK + Sbjct: 603 RISGITPAAISILLVHLKKRGL 624 >gi|113972263|ref|YP_736056.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shewanella sp. MR-4] gi|114049512|ref|YP_740062.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shewanella sp. MR-7] gi|123129966|sp|Q0HD68|MNMG_SHESM RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|123325561|sp|Q0HPF0|MNMG_SHESR RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|113886947|gb|ABI40999.1| glucose inhibited division protein A [Shewanella sp. MR-4] gi|113890954|gb|ABI45005.1| glucose inhibited division protein A [Shewanella sp. MR-7] Length = 629 Score = 800 bits (2067), Expect = 0.0, Method: Composition-based stats. Identities = 290/622 (46%), Positives = 385/622 (61%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +DVIV+GGGHAG EAA AA++G+ T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 FHERFDVIVVGGGHAGTEAALAAARMGSKTLLLTHNLDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M D AGIQFR LN KGPAVR R QADR LYR +Q + +Q NL + Q Sbjct: 63 IDALGGAMAIATDYAGIQFRTLNSSKGPAVRATRAQADRALYRQKIQNILQNQPNLRIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E + + ++ Q VVLT GTFL G IHIG GR GD PS + Sbjct: 123 QAVDDLVVENDRVVGVITQMGLAFEAPAVVLTAGTFLSGKIHIGLENYSGGRAGDPPSIA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIEC 240 L + + GRLKTGTP R+D TI + + +Q D L SFM D + QI C Sbjct: 183 LAHRLRELPIRVGRLKTGTPPRIDANTIDFTQMTEQKGDTPLPVMSFMGDVSHHPKQISC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH II + S +YSG I+ GPRYCPSIEDKI RF +++ HQIF+EPEGL Sbjct: 243 WITHTNEKTHDIIRGGLDRSPMYSGVIEGIGPRYCPSIEDKIHRFSDKSSHQIFIEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 NT+ +YPNGIST+LP ++Q +R+I G+E I+RPGYAIEYDY +P++L +LETK I Sbjct: 303 NTNEIYPNGISTSLPFDVQLNLVRSIQGMENAEIVRPGYAIEYDYFDPRDLKNSLETKTI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 +GLF AGQINGTTGYEEA AQGL+AG+N+A + + C R ++YIGV++DDL++ G Sbjct: 363 NGLFFAGQINGTTGYEEAGAQGLLAGMNAALQVQGKEAWCPRRDEAYIGVLVDDLSTLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT G +LG + + R F++ ++ L+S Sbjct: 423 KEPYRMFTSRAEYRLLLREDNADLRLTAKGRELGLVDDARWASFSEKLESIELELQRLRS 482 Query: 481 LVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 + + ++ + + E L P+ L I L E++ Sbjct: 483 QWIHPNSPLVPVLNPHLNTPISREASFEELLRRPEMDYSKLMQIEGFGPGLADPLAAEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 QI+ Y+ Y RQ E + E +P + DY +P LSNE+ KL+ KP + QAS Sbjct: 543 QIQVKYSGYIQRQQEEINKAVRNENTGLPLNLDYKEVPGLSNEVIAKLNSHKPETIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA+++LL+++KK + Sbjct: 603 RISGITPAAISILLVHLKKRGL 624 >gi|239828706|ref|YP_002951330.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Geobacillus sp. WCH70] gi|239808999|gb|ACS26064.1| glucose inhibited division protein A [Geobacillus sp. WCH70] Length = 629 Score = 800 bits (2067), Expect = 0.0, Method: Composition-based stats. Identities = 285/619 (46%), Positives = 394/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+G GHAGCEAA AA++GA T +IT I M CNP+IGG KG +VREIDA Sbjct: 7 SYDVIVVGAGHAGCEAALAAARIGAKTLVITLNLDMIAFMPCNPSIGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M + D IQ R+LN KGPAVR R QAD+ LY+ M++ + +QENL ++QG+V Sbjct: 67 LGGEMAKNIDKTYIQMRMLNTGKGPAVRALRAQADKVLYQREMKKTLENQENLTLLQGKV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + +V Q + TVV+TTGTFLRG I IG +K +G PS L Sbjct: 127 ERLIVEDGVCKGVVTQTGAHYYAKTVVITTGTFLRGEIIIGDIKYSSGPNNQQPSIKLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F+ R KTGTP R++ +TI + KTE Q D+ FS+ T + Q+ C +T Sbjct: 187 HLEELGFELVRFKTGTPPRVNSRTIDYSKTEIQPGDDVPRAFSYETTEYITDQLPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETHRII EN+ S +YSG IK GPRYCPSIEDKIVRF ++ HQIFLEPEG T+ Sbjct: 247 TTPETHRIIDENLHLSPMYSGMIKGTGPRYCPSIEDKIVRFHDKPRHQIFLEPEGRETEE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE IQ Q + TIPGLEK ++R GYAIEYD I P +L+PTLETK + L+ Sbjct: 307 VYVQGLSTSLPEHIQRQLLTTIPGLEKAQLMRAGYAIEYDAIVPTQLWPTLETKLVKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QG++AGIN+A ++ + I SR+D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGIIAGINAAHRAFGKEEIILSRSDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G K+G I E R ++F + + LKS ++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTELGYKIGLISEERYQKFLAKKEAIEREKKRLKSYIIK 486 Query: 485 SKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + S +DG A + L P+ + +++ + P + S V E+++I+ Sbjct: 487 PTKEVQDVIRQAGGSELKDGIR--AADLLRRPEMTYEHIKQLAPAEEEISPEVAEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + + +K E + IP+D DY ++ L+ E ++KL ++P ++ QAS+I Sbjct: 545 IKYEGYIQKSLQQVERLKKMENKKIPEDIDYDAIHGLATEARQKLKQVRPLSIAQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+Y+++ + Sbjct: 605 GVNPADISILLVYLEQGRI 623 >gi|167629164|ref|YP_001679663.1| glucose-inhibited division protein a [Heliobacterium modesticaldum Ice1] gi|205831517|sp|B0TAB5|MNMG_HELMI RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|167591904|gb|ABZ83652.1| glucose-inhibited division protein a [Heliobacterium modesticaldum Ice1] Length = 637 Score = 800 bits (2067), Expect = 0.0, Method: Composition-based stats. Identities = 282/621 (45%), Positives = 387/621 (62%), Gaps = 7/621 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDVIVIG GHAGCEAA +A+LGA T ++T + M CNPAIGG KGHLVREIDA Sbjct: 8 KYDVIVIGAGHAGCEAALASARLGAKTLILTISWDNVALMPCNPAIGGPAKGHLVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG D IQ R+LN KGPAV R QAD++ Y+ M R + QENLDV Q V Sbjct: 68 LGGQMGLTIDKTCIQIRLLNTGKGPAVHALRAQADKKRYQREMIRVLEHQENLDVRQAMV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E+ + I + +V+TTGT+LRG I IG L P G G PS +L Sbjct: 128 ESVVVEQGRVRGIRTNTGAFFAAPALVITTGTYLRGRIIIGDLHYPGGPNGYFPSVALAA 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S GR KTGTPAR+DG+T+ + + +Q D + FSF++ +I +QI C +T Sbjct: 188 SLRDIGVRLGRFKTGTPARVDGRTVDFSQMVEQPGDREPLNFSFLSPRIERKQISCWLTY 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETH+II +N+ S +Y+G I+ GPRYCPSIEDK+VRF ++ HQ+F+EPEG T Sbjct: 248 TTEETHQIIRDNLHRSPLYAGVIEGTGPRYCPSIEDKVVRFADKKSHQVFIEPEGEGTHE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+ST+LPE++Q +R+I G++ V IIRPGYAIEYDY++P +L +LE ++I GLF Sbjct: 308 MYVQGMSTSLPEDVQVTMLRSIIGMKDVKIIRPGYAIEYDYVDPTQLRLSLEHQEIGGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAAAQGL+AGIN+AR + + R+D+YIGV+IDDL +KG EPY Sbjct: 368 TAGQINGTSGYEEAAAQGLMAGINAARFVKGEEPLVLKRSDAYIGVLIDDLVTKGTNEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSRAEYR+ LR DNAD RLT IG +G + +RR +RF + +Q KS +T Sbjct: 428 RMLTSRAEYRLLLRQDNADQRLTEIGRSIGLVDDRRYRRFREKMQLLEQEVVRWKSSFVT 487 Query: 485 SKNLSSTSISFKQDG----KTRTAYEFLSYPDFSIQNLFSICPDARK---FSSLVIERLQ 537 N +I ++ K + Y+ L P+ + +L +C D K V E+++ Sbjct: 488 PGNKKIQAILDEKKSAPLTKGVSLYDLLRRPELTYDDLIPLCNDGEKDLPIDPEVAEQVE 547 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I + + Y +Q + E + +P D DY + LSNE ++KL KP ++ QAS+ Sbjct: 548 ISAKFEGYLVKQQAQVDRFNKLENKRLPADLDYKRVHGLSNEGRQKLIARKPVSIGQASR 607 Query: 598 IEGMTPAALNLLLIYIKKNTV 618 I G++PA +++LL+Y+++ Sbjct: 608 ISGVSPADISILLVYLEQQRR 628 >gi|160877619|ref|YP_001556935.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shewanella baltica OS195] gi|189039356|sp|A9KX17|MNMG_SHEB9 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|160863141|gb|ABX51675.1| glucose inhibited division protein A [Shewanella baltica OS195] gi|315269817|gb|ADT96670.1| glucose inhibited division protein A [Shewanella baltica OS678] Length = 629 Score = 800 bits (2067), Expect = 0.0, Method: Composition-based stats. Identities = 288/622 (46%), Positives = 383/622 (61%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +DVIV+GGGHAG EAA AA++G+ T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 FHERFDVIVVGGGHAGTEAALAAARMGSKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M D AGIQFR LN KGPAVR R QADR LYR +Q + +Q NL + Q Sbjct: 63 IDALGGAMAIATDYAGIQFRTLNSSKGPAVRATRAQADRALYRQKIQNILQNQPNLRIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E + + +V Q VVLTTGTFL G IHIG GR GD P+ + Sbjct: 123 QAVDDLIVENHQVVGVVTQMGLAFESPAVVLTTGTFLSGKIHIGLENYSGGRAGDPPAIA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIEC 240 L N + GRLKTGTP R+D TI + + +Q D L SFM D + QI C Sbjct: 183 LANRLRELPIRVGRLKTGTPPRIDANTIDFSQMAEQKGDSPLPVMSFMGDVSHHPKQISC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH II + S +YSG I+ GPRYCPSIEDKI RF +++ HQIF+EPEGL Sbjct: 243 WITHTNEKTHEIIRGGLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKSSHQIFIEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 NT +YPNGIST+LP ++Q +R+I G+E I+RPGYAIEYDY +P++L +LETK I Sbjct: 303 NTSEIYPNGISTSLPFDVQLNLVRSIKGMENAEIMRPGYAIEYDYFDPRDLKNSLETKAI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 +GLF AGQINGTTGYEEA AQGL+AG+N++ + + C R ++Y+GV++DDL++ G Sbjct: 363 NGLFFAGQINGTTGYEEAGAQGLLAGMNASLQVQGKEAWCPRRDEAYLGVLVDDLSTLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT G +LG + + R F++ ++ L+ Sbjct: 423 KEPYRMFTSRAEYRLLLREDNADIRLTAKGRELGLVDDARWAAFSEKLESIELELQRLRG 482 Query: 481 LVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 + + +++ + + E L P+ L I E++ Sbjct: 483 QWVHPNSPLIHALNPHLNTPISREASFEELLRRPEMDYSKLMQIEGFGPGLEDPQAAEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 QI+ Y+ Y RQ E + E +P DY +P LSNE+ KL+ KP + QAS Sbjct: 543 QIQVKYSGYIQRQQEEINKAVRNENTGLPLTLDYKEVPGLSNEVIAKLNNHKPETIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA+++LL+++KK + Sbjct: 603 RISGITPAAISILLVHLKKRGL 624 >gi|152984868|ref|YP_001351678.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas aeruginosa PA7] gi|166222720|sp|A6VF43|MNMG_PSEA7 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|150960026|gb|ABR82051.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas aeruginosa PA7] Length = 631 Score = 800 bits (2067), Expect = 0.0, Method: Composition-based stats. Identities = 292/616 (47%), Positives = 384/616 (62%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 8 FDVIVIGGGHAGTEAALAAARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 68 GGAMAEATDKGGIQFRILNSRKGPAVRATRAQADRVLYKAAIRHTLENQPNLWIFQQACD 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 128 DLIVEQDQVRGVVTQMGLRFHADNVVLTTGTFLGGLIHIGLENYSGGRAGDPPSIALARR 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + GRLKTGTP R+DG+++++ +Q D + SF+ K + Q+ C IT Sbjct: 188 LRELPLRVGRLKTGTPPRIDGRSVVFSVMTEQPGDTPIPVMSFLGSKEQHPEQVSCWITH 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+FLEPEGL T Sbjct: 248 TNARTHEIIAANLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFLEPEGLTTHE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R+I G+E +I+RPGYAIEYD+ +P++L +LETK I GLF Sbjct: 308 LYPNGISTSLPFDVQLQIVRSIRGMENAHIVRPGYAIEYDFFDPRDLKYSLETKVIGGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++YIGV++DDL + G EPY Sbjct: 368 FAGQINGTTGYEEAGAQGLLAGANAALRAQGKDSWCPRRDEAYIGVLVDDLITLGTQEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + +RR F + LKS + Sbjct: 428 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDRRWAAFEAKREGIEREEQRLKSTWVR 487 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +I+ + LS P+ +L I DA + V E+++I + Sbjct: 488 PNTPQGEAIAERFGTPLTHEYNLLNLLSRPEIDYASLVEITGDAVD-NPQVAEQVEIRTK 546 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E ++ E +P D DY + LS E++ KL+ +P L QAS+I G+ Sbjct: 547 YAGYIDRQQEEIARLRASEDTRLPVDIDYLGISGLSKEIQNKLNQARPETLGQASRIPGV 606 Query: 602 TPAALNLLLIYIKKNT 617 TPAA++LLLI++KK Sbjct: 607 TPAAISLLLIHLKKRA 622 >gi|326314883|ref|YP_004232555.1| glucose inhibited division protein A [Acidovorax avenae subsp. avenae ATCC 19860] gi|323371719|gb|ADX43988.1| glucose inhibited division protein A [Acidovorax avenae subsp. avenae ATCC 19860] Length = 655 Score = 800 bits (2066), Expect = 0.0, Method: Composition-based stats. Identities = 291/642 (45%), Positives = 394/642 (61%), Gaps = 23/642 (3%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + +DVIV+GGGHAG EAA AA++G+ T L+TH T+G MSCNP+IGG+GKGHLV+ Sbjct: 2 LYPQEFDVIVVGGGHAGTEAALAAARMGSRTLLLTHNIETLGQMSCNPSIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DAL G M D GIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Sbjct: 62 EVDALGGAMALATDEGGIQFRILNSSKGPAVRATRAQADRILYKAAIRRMLENQPNLWLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + + V Q R TVVLT GTFL G IH+G AGR GD P+ Sbjct: 122 QQAVDDLMVEGDRVVGAVTQVGIRFRSRTVVLTAGTFLDGKIHVGLNNYSAGRAGDPPAV 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERL--------IPFSFMTD- 231 SL + GRLKTGTP R+DG++I + + E+Q D FSFM + Sbjct: 182 SLSARLKELQLPQGRLKTGTPPRIDGRSIDFSQCEEQPGDGMPGGVNEGTLPVFSFMGNT 241 Query: 232 KITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGH 291 + RQ+ C IT TN TH II S +++G I+ GPRYCPS+EDKI RF +++ H Sbjct: 242 AMHPRQVPCWITHTNERTHEIIRSGFDRSPMFTGKIEGVGPRYCPSVEDKINRFADKDSH 301 Query: 292 QIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKEL 351 QIFLEPEGL T YPNGIST+LP ++Q+ +R++ GLE +I+RPGYAIEYDY +P+ L Sbjct: 302 QIFLEPEGLTTHEFYPNGISTSLPFDVQYDLVRSMRGLENAHILRPGYAIEYDYFDPRSL 361 Query: 352 FPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 + ET++I GLF AGQINGTTGYEEAAAQGL AGIN+A + R ++Y+GV+ Sbjct: 362 KSSFETRQIQGLFFAGQINGTTGYEEAAAQGLFAGINAALQCRGESAWLPRRDEAYLGVL 421 Query: 412 IDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEY 471 +DDL +KGV EPYRMFTSRAE+R+ LR DNAD RLT G ++G + + R F++ Sbjct: 422 VDDLITKGVTEPYRMFTSRAEFRLQLREDNADMRLTEAGRRMGLVDDARWDAFSRKRDAV 481 Query: 472 NFLRSLLKSLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPD---- 524 LKS + +NL S + K ++ L PD + + L + Sbjct: 482 ARETERLKSTWVNPRNLPAEESARVLGKSIEHEYNLFDLLRRPDVTYEALTGMDGGKYAS 541 Query: 525 -------ARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALS 577 + S+ VIE+++I + YA Y RQ E + E +P++ DY + ALS Sbjct: 542 TAVSRETLGELSAPVIEQVEIAAKYAGYIDRQKDEVQRASHYENLQLPQELDYMQVAALS 601 Query: 578 NELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 E+++KL +P L QAS+I G+TPAA++LLL+++KK + Sbjct: 602 IEVRQKLQKHRPETLGQASRISGVTPAAVSLLLVHLKKGGFR 643 >gi|310765906|gb|ADP10856.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Erwinia sp. Ejp617] Length = 629 Score = 800 bits (2066), Expect = 0.0, Method: Composition-based stats. Identities = 294/618 (47%), Positives = 386/618 (62%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL Sbjct: 7 FDVIVIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 GLMG D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 67 GGLMGHAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + Q R VVLT GTFL G IHIG GR GD PS L Sbjct: 127 DLLVENDRVVGAATQMGLKFRAKAVVLTVGTFLDGKIHIGMDNYSGGRAGDPPSIPLSRR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+D ++I + Q D L FSFM D + Q + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDARSIDFSLLAPQHGDNPLPVFSFMGDVRQHPQQVPCYITY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 247 TNEKTHEVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLTSNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R++ G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF Sbjct: 307 IYPNGISTSLPFDVQMQIVRSMHGMENAKIVRPGYAIEYDFFDPRDLKPTLESKYIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+ R S + R +Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAGRLSADKESWAPRRDQAYLGVLVDDLCTLGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R RF + ++ R L+ + + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTAAGRELGLVDDARWARFNEKLESIERERQRLRDIWVH 486 Query: 485 SKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPD-ARKFSSLVIERLQIES 540 K+ S+ K + + L P+ + Q L ++ + E+++I+ Sbjct: 487 PKSECVADVNSVISAALTKEASGEDLLRRPEMTYQQLMTLSHFAPALADAQAAEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E E +P D DY + LSNE KL+ KP ++ QAS+I G Sbjct: 547 KYEGYIARQQEEIDRQLRNENTALPVDLDYQQVSGLSNEAIAKLNESKPGSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA+++LLIY+KK + Sbjct: 607 ITPAAISILLIYLKKQGL 624 >gi|150019906|ref|YP_001312160.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium beijerinckii NCIMB 8052] gi|205831523|sp|A6M3M4|MNMG_CLOB8 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|149906371|gb|ABR37204.1| glucose inhibited division protein A [Clostridium beijerinckii NCIMB 8052] Length = 626 Score = 800 bits (2066), Expect = 0.0, Method: Composition-based stats. Identities = 281/618 (45%), Positives = 399/618 (64%), Gaps = 3/618 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +D++V+G GHAGCEAA +A+LG +T + T +I M CNP IGG KGHLVREIDA Sbjct: 9 QFDIVVVGAGHAGCEAALASARLGLNTLVCTINLDSIALMPCNPNIGGTAKGHLVREIDA 68 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG D IQ R+LN KGPAV R QAD++ Y+ M+R + QENL + Q EV Sbjct: 69 LGGEMGINIDNTFIQSRMLNTSKGPAVHSLRAQADKKSYQFRMKRILEEQENLKIRQIEV 128 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 N E ++ +V ++ ++ +C V+L TGT+L+G I IG++ G G P+N L Sbjct: 129 TELNVENGKVTGVVTKNGAIFKCKAVILATGTYLKGKIIIGEVSYSGGPNGLFPANDLSQ 188 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S + R KTGTPAR++ +++ + K +Q D+ +IPFSFM++ I Q+ C +T Sbjct: 189 SLLDLGVSLRRFKTGTPARINRRSVDFSKMIEQNGDDNIIPFSFMSENIEREQVSCYLTY 248 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN ET +II +NI S IY+G IK GPRYCPSIEDKI+RF ++ HQIF+EPEGL+T Sbjct: 249 TNDETRKIIRDNIGRSPIYNGSIKGVGPRYCPSIEDKIMRFPDKPQHQIFIEPEGLDTLE 308 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G S++LPEE+Q + ++T+PGLE V ++R YAIEYD I+P +L PTLE K I GL+ Sbjct: 309 MYVGGFSSSLPEEVQIKMLKTLPGLENVEMMRTAYAIEYDSIDPTQLKPTLEFKDIEGLY 368 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ+NG++GYEEA AQGL+AGIN+A K + + + +R+D+YIGV+IDDL +KG EPY Sbjct: 369 GAGQLNGSSGYEEAGAQGLIAGINAALKIKEKEPLILTRSDAYIGVLIDDLVTKGTNEPY 428 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSRAEYR+ LR DNAD RLT +G ++G + E R +F K Q LK+L +T Sbjct: 429 RMMTSRAEYRLLLRQDNADFRLTNLGYRVGLVTEERYDKFIKRKQNIENELERLKNLKVT 488 Query: 485 S-KNLSSTSISFK--QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 + K ++ IS + K T YE L P+ +L I + + V E++ I + Sbjct: 489 NKKEINEFLISLNSAELRKPITFYELLQRPELDYFDLKQIDSERPELPHDVGEQINILTK 548 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y Q+ + + K EK+L+PKD +YS + L E +KLS ++P ++ QA++I G+ Sbjct: 549 YEGYIQSQLEQVAQFKKFEKKLLPKDINYSDIKGLRTEAIQKLSDIRPISIGQATRISGV 608 Query: 602 TPAALNLLLIYIKKNTVK 619 +PA +++LLIY++ K Sbjct: 609 SPADISVLLIYLEHYYNK 626 >gi|308175808|ref|YP_003922513.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Bacillus amyloliquefaciens DSM 7] gi|307608672|emb|CBI45043.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Bacillus amyloliquefaciens DSM 7] gi|328555784|gb|AEB26276.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus amyloliquefaciens TA208] gi|328914173|gb|AEB65769.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Bacillus amyloliquefaciens LL3] Length = 628 Score = 800 bits (2066), Expect = 0.0, Method: Composition-based stats. Identities = 270/619 (43%), Positives = 379/619 (61%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDVIVIG GHAG EAA +A+ GA T ++T + M CNP++GG KG +VREIDA Sbjct: 7 QYDVIVIGAGHAGVEAALASARQGAKTLVLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M R D IQ R+LN KGPAVR R QAD+ Y+ M+ + NL ++QG Sbjct: 67 LGGEMARNIDKTHIQMRMLNTGKGPAVRALRAQADKFQYQHEMKHTLEKTPNLTLLQGIA 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ Q + + TVVLTTGT+LRG I +G L +G PS L Sbjct: 127 ERLIIEDGECRGVITQTGAEYKAKTVVLTTGTYLRGRIILGDLSYSSGPNNQQPSIKLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R+ +I + KTE Q D FS+ T + Q+ C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVSSDSIDYSKTEIQPGDPVPRAFSYETVEYITDQLPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETH II N+ S +YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSPETHEIIDSNLHRSPMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q + + TIPGLEKV ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQQRMLATIPGLEKVQMMRAGYAIEYDAIVPTQLWPTLETKKIPNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QG++AGIN+ RK+ + + SR+D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGIMAGINAGRKALGKEEVILSRSDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT IG ++G I + R + F K + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEIGHEIGLISDERYEAFEKKKAAIEAEKKRLWSVIIK 486 Query: 485 S-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + S S +DG T + + P+ + + + + P V E+++I+ Sbjct: 487 PSPENQEYIRSLGGSELKDGVRGT--DLMKRPEMNYETVTKLAPADSPVPQDVAEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + +++K E + IP DY ++ ++ E ++KL ++P ++ QAS+I Sbjct: 545 VKYEGYIEKSLQQVEKLKKMENKKIPDRIDYDAIKGIATEARQKLKEVRPLSVAQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+Y+++ + Sbjct: 605 GVNPADISILLVYLEQGRI 623 >gi|296113565|ref|YP_003627503.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Moraxella catarrhalis RH4] gi|295921259|gb|ADG61610.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Moraxella catarrhalis RH4] gi|326565484|gb|EGE15655.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Moraxella catarrhalis 12P80B1] gi|326567753|gb|EGE17859.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Moraxella catarrhalis BC1] gi|326568611|gb|EGE18682.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Moraxella catarrhalis BC7] gi|326572605|gb|EGE22594.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Moraxella catarrhalis CO72] Length = 632 Score = 800 bits (2066), Expect = 0.0, Method: Composition-based stats. Identities = 298/626 (47%), Positives = 396/626 (63%), Gaps = 8/626 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 +++DVIVIGGGHAG EA AA++GA+T LITH T+G MSCNPAIGG+GK HLVRE+D Sbjct: 10 KTFDVIVIGGGHAGTEACLAAARMGANTLLITHNIETLGQMSCNPAIGGIGKSHLVREVD 69 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D AGIQFRVLN +KG AVR R QADR LY+ A++ + +Q NL + Q Sbjct: 70 ALGGAMALATDKAGIQFRVLNSRKGAAVRATRAQADRILYKAAIRHTLENQPNLTIFQQS 129 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E ++V + VVLT+GTFL GVIH+G GR GD P+ L Sbjct: 130 VDDIIVENTRAVAVVTATGIRLNTRAVVLTSGTFLGGVIHVGLDHQSGGRAGDMPAIRLA 189 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + + GRLKTGTPAR+D +T+ + Q D L S+M D + RQI C I Sbjct: 190 DRLRELKLPVGRLKTGTPARIDARTVDFSVMTVQSGDTPLPVMSYMGDVAMHPRQINCYI 249 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II N+ S ++SG I+ GPRYCPSIEDKI RF +++ HQIF+EPEGL T Sbjct: 250 THTNERTHEIIRANLDRSPMFSGKIEGVGPRYCPSIEDKIHRFADKDSHQIFIEPEGLTT 309 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNGIST+LP ++Q +FI ++ GLE +I RPGYAIEYDY +P+ L PTLETK I Sbjct: 310 HELYPNGISTSLPFDVQLEFIHSMKGLENAHITRPGYAIEYDYFDPQNLKPTLETKSIDA 369 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQINGTTGYEEAAAQGL+AG+N+AR + R ++Y+GV++DDL + G E Sbjct: 370 LYFAGQINGTTGYEEAAAQGLLAGLNAARMALDEPSWVPQRHEAYLGVLVDDLITHGTKE 429 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAE+R+ LR DNAD RLT IG +LG + + R RF++ ++ + LK + Sbjct: 430 PYRMFTSRAEHRLILREDNADARLTAIGRELGLVDDERWARFSQKMESIASETARLKDIW 489 Query: 483 LTSKNLSSTSISFKQ---DGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 T N K + + L P+ + ++ + S+ V E+++I Sbjct: 490 ATPNNAIGQDFMANTGEILTKENSLLDLLKRPNITFDDIAKV--SDSTVSAKVGEQIEIS 547 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ E +++K E L+P DFDY S+ LSNE+ +KLS ++P L QAS+I Sbjct: 548 VKYQGYIERQNDEIEQMKRLENTLLPLDFDYKSVSGLSNEIVQKLSQIRPTTLGQASRIS 607 Query: 600 GMTPAALNLLLIYIKKNTVKLNEIVL 625 G+TPAA++LL + IKK +K + V+ Sbjct: 608 GVTPAAVSLLAMTIKK--LKKTQAVM 631 >gi|33151283|ref|NP_872636.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Haemophilus ducreyi 35000HP] gi|71152072|sp|Q7VPP9|MNMG_HAEDU RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|33147503|gb|AAP95025.1| glucose inhibited division protein A [Haemophilus ducreyi 35000HP] Length = 630 Score = 800 bits (2066), Expect = 0.0, Method: Composition-based stats. Identities = 300/626 (47%), Positives = 392/626 (62%), Gaps = 6/626 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 YDVIV+GGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV+EID Sbjct: 5 EHYDVIVVGGGHAGTEAALAPARMGLKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKEID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 A+ GLM D AGIQFR LN KGPAVR R QADR LYR +++ + +Q+NL + Q E Sbjct: 65 AMGGLMAIATDHAGIQFRTLNSSKGPAVRATRAQADRVLYRQSVRTALENQQNLAIFQQE 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + S +V + + TV+LT GTFL G IHIG GR GD + L Sbjct: 125 VVDILVENHRASGVVTKMGLTFKAKTVILTAGTFLAGKIHIGLDNYAGGRAGDPAATRLA 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGI 242 + RLKTGTP RLD +TI ++ KQ DE L SFM + + RQI C I Sbjct: 185 ERLRDLNLRVDRLKTGTPPRLDARTINFEVLAKQPGDEVLPVMSFMGEVGQHPRQIPCYI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II N+ S +Y+G I+ GPRYCPSIEDK++RFG+RNGHQI+LEPEGL T Sbjct: 245 THTNHQTHDIIRANLDRSPMYTGIIEGIGPRYCPSIEDKVMRFGDRNGHQIYLEPEGLTT 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 VYPNGIST+LP ++Q + ++ GLE II+ GYAIEYDY +P++L PTLETK I G Sbjct: 305 IEVYPNGISTSLPFDVQMAIVNSMKGLENTRIIKAGYAIEYDYFDPRDLKPTLETKAIEG 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AGIN+A + +R +Y GV++DDL + G E Sbjct: 365 LFFAGQINGTTGYEEAAAQGLLAGINAALQVQAKPSWFPTRDVAYTGVLVDDLCTLGTKE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYR+FTSRAEYR+ LR DNAD RLTPI +LG I E R +RF + ++ R LK + Sbjct: 425 PYRVFTSRAEYRLLLREDNADIRLTPIAHQLGLIDEARWQRFNQKMENIERERERLKQIW 484 Query: 483 LTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQI 538 + ++ + + + + L P+ + L I A E+++I Sbjct: 485 IHPQSAYVDAVNQLVNSPLTREVNGEDLLRRPEINYAKLTEIAAFAPALDDRQAAEQVEI 544 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 Y Y Q E + K E LIP +FDY+ + +LSNE++ KL +P ++ QAS+I Sbjct: 545 AIKYQGYIEHQYNEIERHKRHENTLIPAEFDYNKVDSLSNEVRAKLMQHRPISIGQASRI 604 Query: 599 EGMTPAALNLLLIYIKKNTV-KLNEI 623 G+TPAA+++LL+ +KK + K EI Sbjct: 605 SGITPAAISILLVNLKKQGMLKRGEI 630 >gi|290473125|ref|YP_003465986.1| glucose-inhibited division protein, oxidoreductase-like with FAD/NAD(P)-binding domain [Xenorhabdus bovienii SS-2004] gi|289172419|emb|CBJ79186.1| glucose-inhibited division protein, oxidoreductase-like with FAD/NAD(P)-binding domain [Xenorhabdus bovienii SS-2004] Length = 629 Score = 800 bits (2066), Expect = 0.0, Method: Composition-based stats. Identities = 288/620 (46%), Positives = 396/620 (63%), Gaps = 5/620 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EID Sbjct: 5 EHFDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL GLM + D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NL + Q Sbjct: 65 ALGGLMAQATDQAGIQFRTLNASKGPAVRATRAQADRVLYRQAVRTALENQSNLMIFQQS 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E N I+ +V + + +VVLT GTFL G IHIG GR GD P+ +L Sbjct: 125 VEDLIVENNTITGVVTRMGLKFKAKSVVLTVGTFLDGKIHIGLENYSGGRAGDPPAIALS 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGI 242 + + RLKTGTP R+D +TI + + E+Q D FSFM + + RQI C I Sbjct: 185 HRLRELPLRVARLKTGTPPRIDARTIDFSQLEQQLGDNPTPVFSFMGNVDQHPRQIPCYI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL + Sbjct: 245 THTNEKTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLTS 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + +YPNGIST+LP ++Q Q + ++ G+E I+RPGYAIEYD+ +P++L TLE+K I+G Sbjct: 305 NEIYPNGISTSLPFDVQMQIVHSMKGMENARIVRPGYAIEYDFFDPRDLKQTLESKFING 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AG+N+AR + + R +YIGV++DDL + G E Sbjct: 365 LFFAGQINGTTGYEEAAAQGLLAGLNAARYAADENGWFPRRDQAYIGVLVDDLCTLGTKE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT G +LG + ++R + + + ++ R L+++ Sbjct: 425 PYRMFTSRAEYRLMLREDNADLRLTEKGRELGLVDDQRWEHYCRKVEMIEQERQRLRNIW 484 Query: 483 LTSKNLSSTSIS---FKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQI 538 + + S I+ K + L P+ + + L S+ ++++I Sbjct: 485 VHPHSDSLDEINQMLKAPLSKEANGEDLLRRPEMNYELLTSLPRFTPGLTEPQAADQVEI 544 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + Y Y RQ E ++ E +P D DY + LSNE+ KL+ KP ++ QAS+I Sbjct: 545 QVKYEGYIARQQEEIEKQLRNENAALPLDLDYKQVNGLSNEVIAKLNDHKPSSIGQASRI 604 Query: 599 EGMTPAALNLLLIYIKKNTV 618 G+TPAA+++LL+++KK + Sbjct: 605 SGITPAAISILLVWLKKQGL 624 >gi|315128180|ref|YP_004070183.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudoalteromonas sp. SM9913] gi|315016693|gb|ADT70031.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudoalteromonas sp. SM9913] Length = 629 Score = 800 bits (2066), Expect = 0.0, Method: Composition-based stats. Identities = 287/623 (46%), Positives = 397/623 (63%), Gaps = 5/623 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA AA++G +T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 IFHENFDVIVVGGGHAGTEAALAAARMGMNTLLLTHNMDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G M + D GIQFR LN KGPAVR R QADR LY+ A+Q + +QENL + Sbjct: 62 EIDALGGAMAQAIDKGGIQFRTLNSSKGPAVRATRAQADRALYKAAIQNTLQNQENLKIF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q E N ++ +V Q +VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQSCDDLIVENNRVTGVVTQMGLRFSAPSVVLTVGTFLGGQIHIGLENFKGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IE 239 +L + + F RLKTGTP R+D +T+ + K ++Q D FSFM + + Q I Sbjct: 182 ALADRLRELPFRVDRLKTGTPPRIDARTVDFSKMQEQPGDAPTPVFSFMGKQSDHPQQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I +N+ S +YSG I+ GPRYCPSIEDKIVRF +++ HQIF+EPEG Sbjct: 242 CYITYTNEKTHDVIRKNLHRSPMYSGVIEGIGPRYCPSIEDKIVRFADKDKHQIFVEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L + +YPNGIST+LP ++Q + +++I G E +I RPGYAIEYD+ +P++L +LETK Sbjct: 302 LTSYELYPNGISTSLPFDVQLEIVQSITGFENAHICRPGYAIEYDFFDPRDLKQSLETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEA AQGL+AG+N+A + + R ++Y+GV+IDDL + G Sbjct: 362 IDGLFFAGQINGTTGYEEAGAQGLIAGMNAALQVQGKESWTPRRDEAYVGVLIDDLATLG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT G +LG + + R + F + ++ + +K Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADIRLTEKGRELGLVNDERWQAFNEKMEVIAKEKQRIK 481 Query: 480 SLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVI-ER 535 + + + + + E L P+ +L +I +F++ E+ Sbjct: 482 DTWIHKDHAVVDQVNELLKTPLVREASLEELLRRPEVRYNDLMAIEGLGSEFTNKAALEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I + YA Y RQ E + E+ ++PK+FDY ++ LSNE+ KL +P + QA Sbjct: 542 VEIHTKYAGYIARQQDEINKQLRHEETILPKEFDYKTVSGLSNEVVAKLIDARPDTIGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV 618 S+I G+TPAA++LLL+Y+KK + Sbjct: 602 SRISGITPAAISLLLVYLKKQGL 624 >gi|331007814|ref|ZP_08330919.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [gamma proteobacterium IMCC1989] gi|330418381|gb|EGG92942.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [gamma proteobacterium IMCC1989] Length = 637 Score = 800 bits (2066), Expect = 0.0, Method: Composition-based stats. Identities = 288/628 (45%), Positives = 402/628 (64%), Gaps = 11/628 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + YDVIVIGGGHAG EA AA++G ST L+TH T+G MSCNPAIGG+GK HLV+E Sbjct: 3 YSHHYDVIVIGGGHAGTEACLAAARMGCSTLLLTHNIETLGQMSCNPAIGGIGKSHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDA+ G M + D GIQFRVLN +KGPAVR R QADR LY+ A++ + +QENL + Q Sbjct: 63 IDAMGGAMAQATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAVREILENQENLQIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E + + +V Q ++VVLT GTFL G IHIG GR GD PS + Sbjct: 123 QSVDDLIIEGDTVKGVVTQMGLKFYGTSVVLTAGTFLGGKIHIGLENHSGGRAGDPPSIA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIEC 240 L + +F RLKTGTP R+D K++ + + ++Q+ D L S+M + + Q+ C Sbjct: 183 LADRLREFPLRVDRLKTGTPPRIDAKSVDFSQLQEQWGDTPLPVMSYMGNVADHPEQVCC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH II + S +Y+G I+ GPRYCPSIEDK+ RF +++ HQIF+EPEGL Sbjct: 243 WITYTNQKTHDIIRSGMDRSPMYTGVIEGVGPRYCPSIEDKVSRFADKDSHQIFIEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T +YPNGIST+LP ++Q + +R+I G E +I+RPGYAIEYDY NP++L +LET+ I Sbjct: 303 KTHELYPNGISTSLPFDVQLELVRSINGFENAHIMRPGYAIEYDYFNPQDLRSSLETRCI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 +GLF AGQINGTTGYEEA AQGL+AG+N+ ++ + C R +YIGVM+DDL + G Sbjct: 363 NGLFFAGQINGTTGYEEAGAQGLLAGLNAGLRAQDKESWCPRRDQAYIGVMVDDLITLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAE+R+ LR DNAD+RLT +LG I + R + F + + LK+ Sbjct: 423 QEPYRMFTSRAEHRLLLREDNADSRLTEKARELGLIDDMRWQAFNEKKESIAKEEQRLKT 482 Query: 481 LVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-------SS 530 + + + + ++ K + E L P+ + +L + +F Sbjct: 483 TFVQANSDQANALVEKIKTPLTREYNLMELLKRPELTYADLGELFFKDSEFADSHVKIDP 542 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 V ++++I + Y+ Y RQ E K ++ E+ +P DFDYS++ LSNE K+KL +KP Sbjct: 543 QVSQQIEISAKYSGYIQRQEEEVKRLRQHEETPLPIDFDYSTVEGLSNEAKQKLMTMKPE 602 Query: 591 NLLQASKIEGMTPAALNLLLIYIKKNTV 618 +L +AS+I+G+TPAA++LLL+Y+KK + Sbjct: 603 SLGRASRIQGITPAAISLLLVYLKKRGL 630 >gi|319428565|gb|ADV56639.1| glucose inhibited division protein A [Shewanella putrefaciens 200] Length = 629 Score = 800 bits (2066), Expect = 0.0, Method: Composition-based stats. Identities = 290/622 (46%), Positives = 386/622 (62%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +DVIV+GGGHAG EAA AA++G+ T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 FHERFDVIVVGGGHAGTEAALAAARMGSKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M D AGIQFR LN KGPAVR R QADR LYR +Q + +Q NL + Q Sbjct: 63 IDALGGAMAIATDYAGIQFRTLNSSKGPAVRATRAQADRALYRQKIQNILQNQANLRIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E + + +V Q +VLTTGTFL G IHIG GR GD P+ + Sbjct: 123 QAVDDLIVENDRVVGVVTQMGLAFESPAIVLTTGTFLSGKIHIGLENYSGGRAGDPPAIA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIEC 240 L N + GRLKTGTP R+D TI + + +Q D L SFM D + QI C Sbjct: 183 LANRLRELPIRVGRLKTGTPPRIDANTIDFSQMAEQKGDSPLPVMSFMGDVSHHPKQISC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH II + S +YSG I+ GPRYCPSIEDKI RF +++ HQIF+EPEGL Sbjct: 243 WITHTNEKTHEIIRGGLDRSPMYSGVIEGIGPRYCPSIEDKIHRFSDKSSHQIFIEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 NT +YPNGIST+LP ++Q +R+I G+E I+RPGYAIEYDY +P++L +LETK I Sbjct: 303 NTTEIYPNGISTSLPFDVQLNLVRSIKGMENAEIVRPGYAIEYDYFDPRDLKNSLETKTI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 +GLF AGQINGTTGYEEAAAQGL+AG+N++ + D C R ++Y+GV++DDL++ G Sbjct: 363 NGLFFAGQINGTTGYEEAAAQGLLAGMNASLQVQGKDAWCPRRDEAYLGVLVDDLSTLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT G +LG + + R F++ ++ L++ Sbjct: 423 KEPYRMFTSRAEYRLLLREDNADIRLTAKGRELGLVDDTRWAAFSEKLESIELELQRLRA 482 Query: 481 LVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 + + +++ + + E L P+ L I L E++ Sbjct: 483 QWVHPNSPLIHALNPHLNTPISREASFEELLRRPEMDYSKLMQIEGFGPGLEDPLAAEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 QI+ Y+ Y RQ E + E +P DY +P LSNE+ KL+ KP + QAS Sbjct: 543 QIQVKYSGYIQRQQEEINKAVRNENTGLPLHLDYKEVPGLSNEVIAKLNSHKPETIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA+++LL+++KK + Sbjct: 603 RISGVTPAAISILLVHLKKRGL 624 >gi|77361915|ref|YP_341490.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudoalteromonas haloplanktis TAC125] gi|123589145|sp|Q3IK39|MNMG_PSEHT RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|76876826|emb|CAI88048.1| tRNA modification, oxidoreductase-like with FAD/NAD(P)-binding domain [Pseudoalteromonas haloplanktis TAC125] Length = 629 Score = 799 bits (2065), Expect = 0.0, Method: Composition-based stats. Identities = 285/623 (45%), Positives = 398/623 (63%), Gaps = 5/623 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA AA++G +T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 IFHENFDVIVVGGGHAGTEAALAAARMGMNTLLLTHNMDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G M + D GIQFR LN KGPAVR R QADR LY+ A+Q + +Q+NL + Sbjct: 62 EIDALGGAMAQAIDKGGIQFRTLNSSKGPAVRATRAQADRALYKAAIQTTLQNQDNLKIF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q E + ++ +V Q +VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQSCDDLIVENDRVTGVVTQMGLRFSAPSVVLTVGTFLGGQIHIGLENFKGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IE 239 +L + + F RLKTGTP R+D +T+ + K ++Q D + FSFM + Q I Sbjct: 182 ALADRLRELPFRVDRLKTGTPPRIDARTVDFSKMQEQAGDTPIPVFSFMGKPSDHPQQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I +N+ S +Y G I+ GPRYCPSIEDKIVRF +++ HQIF+EPEG Sbjct: 242 CYITFTNEKTHDVIRKNLHRSPMYGGVIEGIGPRYCPSIEDKIVRFADKDKHQIFVEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L + +YPNGIST+LP ++Q + +++I G E +I RPGYAIEYD+ +P++L +LETK Sbjct: 302 LTSYELYPNGISTSLPFDVQIEIVQSITGFENAHICRPGYAIEYDFFDPRDLKRSLETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEA AQGL+AG+N+A K + R ++Y+GV+IDDLT+ G Sbjct: 362 IDGLFFAGQINGTTGYEEAGAQGLIAGMNAALKVQGKESWTPRRDEAYVGVLIDDLTTLG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT G +LG + + R + + + ++ + +K Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADIRLTEKGRELGLVNDERWQAYNEKMEVIAKEKQRIK 481 Query: 480 SLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVI-ER 535 + + ++ + + E L P+ +L +I +F++ E+ Sbjct: 482 DTWIHKDHTMIDQVNALLKTPLTREASLEELLRRPEIRYNDLMAIDGLGSEFTNQAALEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I + YA Y RQ E + E+ ++PK+FDY ++ LSNE+ KL +P + QA Sbjct: 542 VEIHTKYAGYIVRQQDEINKQLRHEQTILPKEFDYKTVSGLSNEVVAKLIDARPDTIGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV 618 S+I G+TPAA++LLL+Y+KK + Sbjct: 602 SRISGITPAAISLLLVYLKKQGL 624 >gi|288554600|ref|YP_003426535.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus pseudofirmus OF4] gi|288545760|gb|ADC49643.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus pseudofirmus OF4] Length = 628 Score = 799 bits (2065), Expect = 0.0, Method: Composition-based stats. Identities = 276/618 (44%), Positives = 392/618 (63%), Gaps = 4/618 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVIV+G GHAG EA +A++GA+T ++T + M CNP++GG KG +VREIDA Sbjct: 7 DFDVIVVGAGHAGVEAGLASARMGANTLMLTLNLDAVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ LY+ M++ I QENL + QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFLYQHEMKKTIEEQENLLLRQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ + R ++VV+TTGT+LRG I +G+L +G PS L Sbjct: 127 ERLIIEDGECRGVITNTGAEYRSTSVVITTGTYLRGKIILGELAYESGPNNMQPSVQLSY 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R++G TI +DKTE Q D+ FS+ T K Q+ C +T Sbjct: 187 HLQELGFDMVRFKTGTPPRVNGNTIDYDKTEIQPGDDTPRAFSYETTKYITDQLPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETH+II N+ S +YSG I+ GPRYCPSIEDKIVRF ++ HQIFLEPEG NT Sbjct: 247 TGEETHQIINNNLSRSPMYSGMIEGTGPRYCPSIEDKIVRFNDKPRHQIFLEPEGRNTTE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q + +++IPGLE+V ++RPGYAIEYD I P +L+PTLETKK+ GLF Sbjct: 307 VYVQGLSTSLPEDVQLKILKSIPGLEQVRMMRPGYAIEYDSIVPTQLWPTLETKKVPGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QG++AGIN+ARK+ +C+ R+++YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGIMAGINAARKAKGEECLILDRSEAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT G ++G I E R RF E + L+ +++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEKGYEMGLISEDRFNRFELKKAEIAAEKKRLEKIIIK 486 Query: 485 SKNLSSTSI---SFKQDGKTRTAYEFLSYPDFSIQNLFSICPDAR-KFSSLVIERLQIES 540 + + + + +A L P+ + ++ + + S V E+++I+ Sbjct: 487 PSDEVAAVLQEAGATPLKEAVSAAMLLKRPELTYAHVSKLIEAPESEISDDVGEQVEIQV 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y +Q+ + K E + IP+D DY ++ L+ E K+KLS ++P ++ QAS++ G Sbjct: 547 KYEGYIEKQLQQVDRSKKMESKKIPEDLDYHAINGLATEAKQKLSEVRPLSVGQASRVSG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 + PA +++LL+Y+++ + Sbjct: 607 VNPADISILLVYLEQGRL 624 >gi|167854772|ref|ZP_02477550.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Haemophilus parasuis 29755] gi|167854070|gb|EDS25306.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Haemophilus parasuis 29755] Length = 630 Score = 799 bits (2065), Expect = 0.0, Method: Composition-based stats. Identities = 296/624 (47%), Positives = 387/624 (62%), Gaps = 6/624 (0%) Query: 1 MINRS-YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLV 59 MI R YDVIV+GGGHAG EAA A++G T L+TH T+G MSCNPAIGG+GKGHLV Sbjct: 1 MIYREIYDVIVVGGGHAGTEAALAPARMGLKTLLLTHNVDTLGQMSCNPAIGGIGKGHLV 60 Query: 60 REIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDV 119 +EIDA+ GLM D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NLD+ Sbjct: 61 KEIDAMGGLMATATDKAGIQFRTLNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLDI 120 Query: 120 IQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 Q EV E N V + + V+LT GTFL G IHIG GR GD + Sbjct: 121 FQQEVVDILVENNRAVGAVTKMGLAFKAKAVILTAGTFLAGKIHIGLDNYAGGRAGDPAA 180 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQI 238 L + + RLKTGTP RLD +TI +D KQ DE L SFM + RQI Sbjct: 181 TMLADRLRDLNLRVDRLKTGTPPRLDARTINFDVLAKQHGDEVLPVMSFMGSVEQHPRQI 240 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C IT TN +TH +I ++ S +Y+G I+ GPRYCPSIEDK++RF +RN HQI+LEPE Sbjct: 241 PCYITHTNEQTHDLIRNSLDRSPMYTGIIEGIGPRYCPSIEDKVMRFSDRNSHQIYLEPE 300 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL T VYPNGIST+LP ++Q + ++ GLE II+PGYAIEYDY +P++L PTLETK Sbjct: 301 GLTTIEVYPNGISTSLPFDVQMGIVNSMKGLENTRIIKPGYAIEYDYFDPRDLKPTLETK 360 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I GLF AGQINGTTGYEEAAAQGL+AGIN+ + D +R +Y GV++DDL + Sbjct: 361 AIDGLFFAGQINGTTGYEEAAAQGLLAGINAGLQVQGKDAWFPTRDLAYTGVLVDDLCTL 420 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYR+FTSRAEYR+ LR DNAD RLTPI + G I E R RF + ++ ++ L Sbjct: 421 GTKEPYRVFTSRAEYRLLLREDNADARLTPIAHQFGLIDEARWARFNEKMENIEKEKARL 480 Query: 479 KSLVLTSKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIE 534 K + + ++ + + + + + P+ + + L I P A E Sbjct: 481 KQTWAHLQMANLAEVNALLNSPLAREASGEDLIRRPEVTYEALTQIAPFAPAIEDKEAAE 540 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I Y Y Q E + K E IP +FDY + +LSNE++ KL +P ++ Q Sbjct: 541 QVEISIKYQGYIEHQQQEIERHKRHENTQIPAEFDYDKVESLSNEVRAKLMQHRPVSIGQ 600 Query: 595 ASKIEGMTPAALNLLLIYIKKNTV 618 AS+I G+TPAA+++LL+ +KK + Sbjct: 601 ASRISGITPAAISILLVNLKKQGM 624 >gi|154688206|ref|YP_001423367.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus amyloliquefaciens FZB42] gi|166222906|sp|A7ZAW0|MNMG_BACA2 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|154354057|gb|ABS76136.1| GidA [Bacillus amyloliquefaciens FZB42] Length = 628 Score = 799 bits (2065), Expect = 0.0, Method: Composition-based stats. Identities = 270/619 (43%), Positives = 378/619 (61%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDVIVIG GHAG EAA +A+ GA T ++T + M CNP++GG KG +VREIDA Sbjct: 7 QYDVIVIGAGHAGVEAALASARQGAKTLVLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M R D IQ R+LN KGPAVR R QAD+ Y+ M+ + NL ++QG Sbjct: 67 LGGEMARNIDKTHIQMRMLNTGKGPAVRALRAQADKFQYQHEMKHTLEKTPNLTLLQGIA 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ Q + + TVVLTTGT+LRG I +G L +G PS L Sbjct: 127 ERLIIEDGECRGVITQTGAEYKAKTVVLTTGTYLRGRIILGDLSYSSGPNNQQPSIKLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R+ +I + KTE Q D FS+ T + Q+ C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVSSDSIDYSKTEIQPGDPVPRAFSYETVEYITDQLPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETH II N+ S +YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSPETHEIIDSNLHRSPMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q + + TIPGLEKV ++R GYAIEYD I P +L+PTLETKKI L+ Sbjct: 307 VYVQGLSTSLPEDVQQRMLATIPGLEKVQMMRAGYAIEYDAIVPTQLWPTLETKKIPNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QG++AGIN+ RK+ + + SR+D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGIMAGINAGRKALGKEEVILSRSDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT IG +G I + R + F K + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEIGHDIGLISDERYEAFEKKKAAIEAEKKRLWSVIIK 486 Query: 485 S-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + S S +DG T + + P+ + + + + P V E+++I+ Sbjct: 487 PSPENQEYIRSLGGSELKDGVRGT--DLMKRPEMNYETVTKLAPADSPVPQDVAEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + +++K E + IP DY ++ ++ E ++KL ++P ++ QAS+I Sbjct: 545 VKYEGYIEKSLQQVEKLKKMENKKIPDRIDYDAIKGIATEARQKLKEVRPLSVAQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+Y+++ + Sbjct: 605 GVNPADISILLVYLEQGRI 623 >gi|289551830|ref|YP_003472734.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus lugdunensis HKU09-01] gi|289181361|gb|ADC88606.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus lugdunensis HKU09-01] Length = 626 Score = 799 bits (2065), Expect = 0.0, Method: Composition-based stats. Identities = 283/624 (45%), Positives = 397/624 (63%), Gaps = 7/624 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + ++YDVIVIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VRE Sbjct: 1 MTQNYDVIVIGAGHAGIEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R I + +LD++Q Sbjct: 61 IDALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEAHLDIMQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G V E N++ + + VV+TTGTFLRG I +G +K +G PS + Sbjct: 121 GMVDDLIIEDNVVKGVRTNIGTEYHAKAVVITTGTFLRGEIILGNMKYSSGPNHQLPSIT 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L ++ + F+ R KTGTP R++ KTI + KTE Q D+ FSF T + Q+ C Sbjct: 181 LADNLRELGFEVVRFKTGTPPRVNAKTIDYSKTEIQPGDDVGRAFSFETTEYILDQLPCW 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN ETH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG N Sbjct: 241 LTYTNGETHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRN 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETKKI Sbjct: 301 TNEVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKKIK 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 L+ AGQINGT+GYEEAA QG++AGIN+A K SR+D+YIGV+IDDL +KG Sbjct: 361 NLYTAGQINGTSGYEEAAGQGIMAGINAAGKVLGTGEKILSRSDAYIGVLIDDLVTKGTN 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAEYR+ LR DNAD RLT IG +LG I E R RF + Q+ L + Sbjct: 421 EPYRLLTSRAEYRLLLRHDNADLRLTDIGYELGMISEARYARFNEKRQQIQDEIDRLTHI 480 Query: 482 VLTSKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 + + + S +DG A + L P+ + + I +A + V E++ Sbjct: 481 RIKPNAHTQSVIEAHGGSQLKDGI--LAIDLLRRPEMTYDTILEILGEAHQLPEAVAEQV 538 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I++ Y Y + + + +++K E++ IP+D DYS + +L+ E +EKL+ +KP N+ QAS Sbjct: 539 EIQTKYEGYINKSLQQVEKVKRMEQKKIPEDLDYSKVDSLATEAREKLAKVKPLNIAQAS 598 Query: 597 KIEGMTPAALNLLLIYIKKNTVKL 620 +I G+ PA +++LL+Y+++ ++ Sbjct: 599 RISGVNPADISILLVYLEQGKLQR 622 >gi|16081153|ref|NP_391981.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus subtilis subsp. subtilis str. 168] gi|221312084|ref|ZP_03593931.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus subtilis subsp. subtilis str. 168] gi|221316409|ref|ZP_03598214.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221321322|ref|ZP_03602616.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus subtilis subsp. subtilis str. JH642] gi|221325605|ref|ZP_03606899.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus subtilis subsp. subtilis str. SMY] gi|321313662|ref|YP_004205949.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus subtilis BSn5] gi|121187|sp|P25812|MNMG_BACSU RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|40026|emb|CAA44404.1| unnamed protein product [Bacillus subtilis] gi|467385|dbj|BAA05231.1| unknown [Bacillus subtilis] gi|2636648|emb|CAB16138.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Bacillus subtilis subsp. subtilis str. 168] gi|291486740|dbj|BAI87815.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus subtilis subsp. natto BEST195] gi|320019936|gb|ADV94922.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus subtilis BSn5] Length = 628 Score = 799 bits (2065), Expect = 0.0, Method: Composition-based stats. Identities = 271/619 (43%), Positives = 381/619 (61%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDVIVIG GHAG EAA +A+ GA T ++T + M CNP++GG KG +VREIDA Sbjct: 7 QYDVIVIGAGHAGVEAALASARQGAKTLVLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ M+ + + NL ++QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFQYQHEMKNTLEKEPNLTLLQGIV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ Q + R VV+TTGT+LRG I +G L +G PS L Sbjct: 127 ERLIVEDGECRGVITQTGAHYRAKAVVMTTGTYLRGRIILGDLSYSSGPNNQQPSIKLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R+ TI + KTE Q D+ FS+ T + Q+ C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVKSDTIDYSKTEIQPGDDVPRAFSYETVEYITDQLPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETH II N+ S +YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSPETHEIIDSNLHRSPMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q + + TIPGLE V ++R GYAIEYD I P +L+PTLETKKI+ L+ Sbjct: 307 VYVQGLSTSLPEDVQQRMLATIPGLENVQMMRAGYAIEYDAIVPTQLWPTLETKKITNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QG++AGIN+ RK+ + + SR+D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGIMAGINAGRKALGKEEVILSRSDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT IG ++G I + R F K + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEIGHRIGLISDERYAAFEKKKAAIEAEKKRLHSVIIK 486 Query: 485 S-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + S S +DG T + + P+ + + + + P V E+++I+ Sbjct: 487 PSPENQEYIRSLGGSELKDGVRGT--DLMKRPEMNYETVTKLAPPEVPVPQDVAEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + +++K E + IP DY ++ ++ E ++KL ++P ++ QAS+I Sbjct: 545 VKYEGYIEKSLQQVEKLKKMENKKIPDRIDYDAIKGIATEARQKLKNVRPLSVAQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+Y+++ + Sbjct: 605 GVNPADISILLVYLEQGRI 623 >gi|119471638|ref|ZP_01614023.1| glucose-inhibited division protein A [Alteromonadales bacterium TW-7] gi|119445417|gb|EAW26704.1| glucose-inhibited division protein A [Alteromonadales bacterium TW-7] Length = 629 Score = 799 bits (2065), Expect = 0.0, Method: Composition-based stats. Identities = 288/623 (46%), Positives = 397/623 (63%), Gaps = 5/623 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + ++DVIV+GGGHAG EAA AA++G +T L+TH T+G MSCNPAIGG+GKGHLV+ Sbjct: 2 IFHENFDVIVVGGGHAGTEAALAAARMGMNTLLLTHNMDTLGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G M + D GIQFR LN KGPAVR R QADR LY+ A+Q + +QENL + Sbjct: 62 EIDALGGAMAQAIDKGGIQFRTLNSSKGPAVRATRAQADRALYKAAIQTTLQNQENLKIF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q E + ++ +V Q +VVLT GTFL G IHIG GR GD PS Sbjct: 122 QQSCDDLIVENDRVTGVVTQMGLRFSAPSVVLTVGTFLGGQIHIGLENYKGGRAGDPPSI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IE 239 +L + F RLKTGTP R+D +T+ + K ++Q D FSF+ + + Q I Sbjct: 182 ALAQRLREQPFRVDRLKTGTPPRIDARTVDFSKMQEQPGDAPTPVFSFLGKQSDHPQQIP 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TN +TH +I +N+ S +YSG I+ GPRYCPSIEDKIVRF +++ HQIF+EPEG Sbjct: 242 CYITYTNEKTHDVIRKNLHRSPMYSGVIEGIGPRYCPSIEDKIVRFADKDKHQIFVEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L + +YPNGIST+LP ++Q + +++I G E +I RPGYAIEYDY +P++L +LETK Sbjct: 302 LTSYELYPNGISTSLPFDVQLEIVQSITGFENAHICRPGYAIEYDYFDPRDLKQSLETKF 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEA AQGL+AG+N+A K D R ++Y+GV+IDDL + G Sbjct: 362 IEGLFFAGQINGTTGYEEAGAQGLIAGMNAALKVQGKDSWTPRRDEAYVGVLIDDLATLG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT G +LG + + R + F + ++ + +K Sbjct: 422 TKEPYRMFTSRAEYRLLLREDNADIRLTEKGRELGLVNDERWQAFNEKMEIIEKEKQRIK 481 Query: 480 SLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVI-ER 535 + + ++ + + E L P+ +L +I +F++ E+ Sbjct: 482 DTWIHKDHTVVDQVNALLKAPLTREASLEELLRRPEIRYDDLMAIEGLGSEFTNKAALEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 ++I + YA Y RQ E + E+ ++PK+FDY ++ LSNE+ KL +P + QA Sbjct: 542 VEIHTKYAGYIARQQDEINKQLRHEETILPKEFDYKTVSGLSNEVVAKLEESRPDTIGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNTV 618 S+I G+TPAA++LLL+Y+KK + Sbjct: 602 SRISGITPAAISLLLVYLKKQGL 624 >gi|114565206|ref|YP_752720.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shewanella frigidimarina NCIMB 400] gi|122298231|sp|Q07VT3|MNMG_SHEFN RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|114336499|gb|ABI73881.1| glucose inhibited division protein A [Shewanella frigidimarina NCIMB 400] Length = 629 Score = 799 bits (2064), Expect = 0.0, Method: Composition-based stats. Identities = 286/622 (45%), Positives = 387/622 (62%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +DVIV+GGGHAG EAA AA++G+ T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 FHERFDVIVVGGGHAGTEAALAAARMGSKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M D AGIQFR LN KGPAVR R QADR LYR +Q + +Q NL + Q Sbjct: 63 IDALGGAMATATDFAGIQFRTLNSSKGPAVRATRAQADRALYRQKIQHILQNQPNLRIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E + + +V Q +VLTTGTFL G IHIG GR GD P+ + Sbjct: 123 QAVDDLVVENDKVIGVVTQMGLAFEAPAIVLTTGTFLSGKIHIGMQNYSGGRAGDPPAIA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIEC 240 L N + + GRLKTGTP R+D TI + + +Q D L SF+ D + RQ+ C Sbjct: 183 LANRLRELNIRVGRLKTGTPPRIDANTIDFTQMTEQKGDTPLPVMSFIGDVSQHPRQVSC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH II + S +YSG I+ GPRYCPSIEDKI RF +++ HQIF+EPEGL Sbjct: 243 FITHTNEKTHDIIRGGLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKSSHQIFIEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 +T+ +YPNGIST+LP ++Q +R+I G+E I+RPGYAIEYDY +P++L +LETK I Sbjct: 303 STNEIYPNGISTSLPFDVQLNLVRSIKGMENAEIMRPGYAIEYDYFDPRDLKNSLETKAI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GL+ AGQINGTTGYEEA AQGL+AG+N++ + C R ++Y+GV++DDL++ G Sbjct: 363 EGLYFAGQINGTTGYEEAGAQGLLAGMNASLQVQGKTAWCPRRDEAYLGVLVDDLSTLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT G +LG + ++R + F + L+S Sbjct: 423 KEPYRMFTSRAEYRLLLREDNADLRLTEKGRELGLVDDKRWESFIAKRESIELELQRLRS 482 Query: 481 LVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERL 536 + + ++ + + + + L P+ L S+ E++ Sbjct: 483 QWVHPNSALLGVLNPELNTPISREASFEDLLRRPEMDYAKLMSLEGFGPGLDDQQAAEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 QI+ Y+ Y RQ E + E L+P D DY +P LSNE+ KL+ KP + QAS Sbjct: 543 QIQVKYSGYIQRQQDEIDKAIRHENSLLPLDLDYQEVPGLSNEVIAKLNNHKPDTVGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA+++LL+++KK + Sbjct: 603 RISGITPAAISILLVHLKKRGL 624 >gi|326568737|gb|EGE18807.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Moraxella catarrhalis BC8] Length = 632 Score = 799 bits (2064), Expect = 0.0, Method: Composition-based stats. Identities = 298/626 (47%), Positives = 396/626 (63%), Gaps = 8/626 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 +++DVIVIGGGHAG EA AA++GA+T LITH T+G MSCNPAIGG+GK HLVRE+D Sbjct: 10 KTFDVIVIGGGHAGTEACLAAARMGANTLLITHNIETLGQMSCNPAIGGIGKSHLVREVD 69 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D AGIQFRVLN +KG AVR R QADR LY+ A++ + +Q NL + Q Sbjct: 70 ALGGAMALATDKAGIQFRVLNSRKGAAVRATRAQADRILYKAAIRHTLENQPNLTIFQQS 129 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E ++V + VVLT+GTFL GVIH+G GR GD P+ L Sbjct: 130 VDDIIVENTRAVAVVTATGIRLNTRAVVLTSGTFLGGVIHVGLDHQSGGRAGDMPAIRLA 189 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + + GRLKTGTPAR+D +T+ + Q D L S+M D + RQI C I Sbjct: 190 DRLRELKLPVGRLKTGTPARIDARTVDFSVMTVQSGDTPLPVMSYMGDVAMHPRQINCYI 249 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II N+ S ++SG I+ GPRYCPSIEDKI RF +++ HQIF+EPEGL T Sbjct: 250 THTNERTHEIIRANLDRSPMFSGKIEGVGPRYCPSIEDKIHRFADKDSHQIFIEPEGLTT 309 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNGIST+LP ++Q +FI ++ GLE +I RPGYAIEYDY +P+ L PTLETK I Sbjct: 310 HELYPNGISTSLPFDVQLEFIHSMKGLENAHITRPGYAIEYDYFDPQNLKPTLETKSIDA 369 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQINGTTGYEEAAAQGL+AG+N+AR + R ++Y+GV++DDL + G E Sbjct: 370 LYFAGQINGTTGYEEAAAQGLLAGLNAARMALDESSWVPQRHEAYLGVLVDDLITHGTKE 429 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAE+R+ LR DNAD RLT IG +LG + + R RF++ ++ + LK + Sbjct: 430 PYRMFTSRAEHRLILREDNADARLTAIGRELGLVDDERWARFSQKMESIASETARLKDIW 489 Query: 483 LTSKNLSSTSISFKQ---DGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 T N K + + L P+ + ++ + S+ V E+++I Sbjct: 490 ATPNNAIGQDFMANTGEILTKENSLLDLLKRPNITFDDIAKV--SDSTVSAKVGEQIEIS 547 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ E +++K E L+P DFDY S+ LSNE+ +KLS ++P L QAS+I Sbjct: 548 VKYQGYIERQNDEIEQMKRLENTLLPLDFDYKSVSGLSNEIVQKLSQIRPTTLGQASRIS 607 Query: 600 GMTPAALNLLLIYIKKNTVKLNEIVL 625 G+TPAA++LL + IKK +K + V+ Sbjct: 608 GVTPAAVSLLAMTIKK--LKKTQAVM 631 >gi|254000527|ref|YP_003052590.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Methylovorus sp. SIP3-4] gi|253987206|gb|ACT52063.1| glucose inhibited division protein A [Methylovorus sp. SIP3-4] Length = 631 Score = 799 bits (2064), Expect = 0.0, Method: Composition-based stats. Identities = 285/628 (45%), Positives = 400/628 (63%), Gaps = 5/628 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +DVIV+GGGHAG EAA +A++G T L+TH T+G MSCNP+IGG+GKGHLV+E Sbjct: 3 FPEKFDVIVVGGGHAGTEAALASARMGQKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DAL G M D GIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q Sbjct: 63 VDALGGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRVLYKAAIRRRLENQANLWLFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V + + +V Q VVLT GTFL G++H+G AGR GD P+ S Sbjct: 123 QAVDDIILDGTRAAGVVTQLGLRFESKAVVLTAGTFLAGLVHVGLANYQAGRAGDPPAVS 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIEC 240 L + GRLKTGTP R+DG+TI + +Q D+ + FSF+ + + Q+ C Sbjct: 183 LAARLREIGLPAGRLKTGTPPRIDGRTIDYSVMLEQPGDDPVPVFSFLGNASQHPAQLPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN TH II + S +Y+G I+ GPRYCPS+EDKI RF ++ HQIFLEPEGL Sbjct: 243 WITSTNERTHDIIRSGLDRSPMYTGVIEGVGPRYCPSVEDKIHRFADKESHQIFLEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T+ +YPNGIST+LP +IQ+Q +R+I GLE +I+RPGYAIEYDY +P+ L +LETK + Sbjct: 303 TTNEIYPNGISTSLPFDIQYQLVRSIKGLENAHILRPGYAIEYDYYDPRGLKNSLETKAV 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQINGTTGYEEAAAQGL+AG N+A + + D C +R +Y+GV++DDL ++GV Sbjct: 363 QGLFFAGQINGTTGYEEAAAQGLLAGANAALYAQEKDSWCPARDQAYLGVLVDDLITRGV 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT G ++G + + R + F++ + + L+ Sbjct: 423 SEPYRMFTSRAEYRLMLREDNADMRLTEAGRRIGLVDDARWEAFSRKQEAILREQERLRK 482 Query: 481 LVLTSKNLSS---TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 + +S+ + KQ + + +E L P+ S + L ++ + V ++++ Sbjct: 483 TYVHPGQVSADVMEKVLGKQIDREYSMFELLRRPEVSYEALLTLAEGDGEQDEQVRQQIE 542 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I + Y Y RQ E + + +E +P D DY + LS E ++KL+ KP + QAS+ Sbjct: 543 IAAKYQGYIDRQADEIERQRGQEDTRLPADMDYREVHGLSIEAQQKLNAQKPETVGQASR 602 Query: 598 IEGMTPAALNLLLIYIK-KNTVKLNEIV 624 I G+TPAA++LLL+++K +N K +++ Sbjct: 603 ISGITPAAISLLLVHLKRRNRSKKSDVA 630 >gi|15616623|ref|NP_244929.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus halodurans C-125] gi|12643249|sp|Q9RCA8|MNMG_BACHD RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|10176686|dbj|BAB07780.1| glucose-inhibited division protein [Bacillus halodurans C-125] Length = 632 Score = 799 bits (2064), Expect = 0.0, Method: Composition-based stats. Identities = 271/618 (43%), Positives = 388/618 (62%), Gaps = 4/618 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVIV+G GHAG EA AA++GA+T ++T + M CNP++GG KG +VREIDA Sbjct: 7 EFDVIVVGAGHAGVEAGLAAARMGANTLMLTLNLDAVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M R D IQ R+LN KGPAVR R QAD+ LY+ M++ I +ENL + QG V Sbjct: 67 LGGEMARNIDKTHIQMRMLNTGKGPAVRALRAQADKFLYQHEMKKTIEEEENLLLRQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ + R VV+TTGT+LRG I IG L +G PS +L Sbjct: 127 ERLIIEDGECRGVITNTGAEYRAKAVVVTTGTYLRGKIIIGDLAYESGPNNMQPSINLSY 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F+ R KTGTP R++G+TI +DKTE Q DE FS+ T K Q+ C +T Sbjct: 187 HLQELGFEMVRFKTGTPPRVNGETIDYDKTEIQPGDEVPRAFSYETTKYITDQLPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T +TH+II +N+ S +YSG I+ GPRYCPSIEDKIVRF ++ HQIFLEPEG +T Sbjct: 247 TGDKTHQIINDNLGRSPMYSGMIEGTGPRYCPSIEDKIVRFNDKPRHQIFLEPEGRHTSE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q +++IPGLEK ++RPGYAIEYD I P +L+PTLETKK+ GLF Sbjct: 307 VYVQGLSTSLPEDVQLDVLKSIPGLEKARMMRPGYAIEYDAIVPTQLWPTLETKKVPGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QG++AGIN+A + D + R+++YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGIMAGINAALRVQGKDGLILDRSEAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT G ++G I R +RF + + + L+S+ + Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEKGYEIGLIARERYERFCEKKAQIAAEKKRLESITVK 486 Query: 485 SK---NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDAR-KFSSLVIERLQIES 540 N + + A FL P+ + +++ + P + S+ V E+++I+ Sbjct: 487 PSKEVNALLEEVGSAPLKEAVQANVFLKRPEVTYEHVAKVIPAPEQELSADVAEQVEIQI 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y + + + + K + IP+D DY ++ L+ E K+KLS ++P ++ QAS++ G Sbjct: 547 KYEGYISKMLQQVERAKKMNDKKIPEDLDYDAINGLATEAKQKLSEVRPLSVGQASRVSG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 + P+ +++LL+Y+++ + Sbjct: 607 VNPSDISILLVYLEQGRL 624 >gi|313202486|ref|YP_004041144.1| glucose inhibited division protein a [Methylovorus sp. MP688] gi|312441802|gb|ADQ85908.1| glucose inhibited division protein A [Methylovorus sp. MP688] Length = 631 Score = 799 bits (2064), Expect = 0.0, Method: Composition-based stats. Identities = 285/628 (45%), Positives = 400/628 (63%), Gaps = 5/628 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +DVIV+GGGHAG EAA +A++G T L+TH T+G MSCNP+IGG+GKGHLV+E Sbjct: 3 FPEKFDVIVVGGGHAGTEAALASARMGQKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DAL G M D GIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q Sbjct: 63 VDALGGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRVLYKAAIRRRLENQANLWLFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V + + +V Q VVLT GTFL G++H+G AGR GD P+ S Sbjct: 123 QAVDDIILDGTRAAGVVTQLGLRFESKAVVLTAGTFLAGLVHVGLANYQAGRAGDPPAVS 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIEC 240 L + GRLKTGTP R+DG+TI + +Q D+ + FSF+ + + Q+ C Sbjct: 183 LAARLREIGLPAGRLKTGTPPRIDGRTIDYSVMLEQPGDDPVPVFSFLGNASQHPAQLPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN TH II + S +Y+G I+ GPRYCPS+EDKI RF ++ HQIFLEPEGL Sbjct: 243 WITSTNERTHDIIRSGLDRSPMYTGVIEGVGPRYCPSVEDKIHRFADKESHQIFLEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T+ +YPNGIST+LP +IQ+Q +R+I GLE +I+RPGYAIEYDY +P+ L +LETK + Sbjct: 303 TTNEIYPNGISTSLPFDIQYQLVRSIKGLENAHILRPGYAIEYDYYDPRGLKNSLETKAV 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQINGTTGYEEAAAQGL+AG N+A + + D C +R +Y+GV++DDL ++GV Sbjct: 363 QGLFFAGQINGTTGYEEAAAQGLLAGANAALYAQEKDSWCPARDQAYLGVLVDDLITRGV 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT G ++G + + R + F++ + + L+ Sbjct: 423 SEPYRMFTSRAEYRLMLREDNADMRLTEAGRRIGLVDDARWEAFSRKQEAILREQERLRK 482 Query: 481 LVLTSKNLSS---TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 + +S+ + KQ + + +E L P+ S + L ++ + V ++++ Sbjct: 483 TYVHPGQVSADVMEKVLGKQIDREYSMFELLRRPEVSYEALLTLAEGDGEQDEQVRQQIE 542 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I + Y Y RQ E + + +E +P D DY + LS E ++KL+ KP + QAS+ Sbjct: 543 IAAKYQGYIDRQADEIERQRGQEDTPLPADMDYREVHGLSIEAQQKLNAQKPETVGQASR 602 Query: 598 IEGMTPAALNLLLIYIK-KNTVKLNEIV 624 I G+TPAA++LLL+++K +N K +++ Sbjct: 603 ISGITPAAISLLLVHLKRRNRSKKSDVA 630 >gi|299531163|ref|ZP_07044575.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Comamonas testosteroni S44] gi|298720866|gb|EFI61811.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Comamonas testosteroni S44] Length = 654 Score = 799 bits (2064), Expect = 0.0, Method: Composition-based stats. Identities = 290/642 (45%), Positives = 394/642 (61%), Gaps = 23/642 (3%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + +DVIV+GGGHAG EAA AA++G+ T L+TH T+G MSCNP+IGG+GKGHLV+ Sbjct: 2 LYPQEFDVIVVGGGHAGTEAALAAARMGSKTLLLTHNIETLGQMSCNPSIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DAL G M D GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Sbjct: 62 EVDALGGAMALATDKGGIQFRILNSSKGPAVRATRAQADRILYKAAIREMLENQPNLWLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + + V Q R TVVLT GTFL G IH+G AGR GD P+ Sbjct: 122 QQAVDDLMVEGDRVVGAVTQVGLKFRSRTVVLTAGTFLDGKIHVGLNNYAAGRAGDPPAV 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERL--------IPFSFMTDK 232 SL + GRLKTGTP R+DG++I + + E+Q D FSFM ++ Sbjct: 182 SLSARLKELKLPQGRLKTGTPPRIDGRSIDFSQCEEQPGDGMPGGVNEGEVPVFSFMGNR 241 Query: 233 -ITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGH 291 + RQ+ C IT TN TH II S +++G I+ GPRYCPS+EDKI RF ++ H Sbjct: 242 AMHPRQMPCWITHTNARTHEIIRSGFDRSPMFTGKIEGVGPRYCPSVEDKINRFADKESH 301 Query: 292 QIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKEL 351 QIFLEPEGL T YPNGIST+LP +IQ++ +R++ GLE +I+RPGYAIEYDY +P+ L Sbjct: 302 QIFLEPEGLTTHEFYPNGISTSLPFDIQYELVRSMKGLENAHILRPGYAIEYDYFDPRSL 361 Query: 352 FPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 + ETK+I GLF AGQINGTTGYEEAAAQGL AG+N+A + R ++Y+GV+ Sbjct: 362 KSSFETKQIQGLFFAGQINGTTGYEEAAAQGLFAGLNAALQCRGEGPWMPRRDEAYLGVL 421 Query: 412 IDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEY 471 +DDL +KGV EPYRMFTSRAE+R+ LR DNAD RLT G ++G + + R F++ Sbjct: 422 VDDLITKGVTEPYRMFTSRAEFRLQLREDNADMRLTEAGRQMGLVDDARWDSFSRKRDAV 481 Query: 472 NFLRSLLKSLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLF--------- 519 + LKS + + + S + K + ++ L P L Sbjct: 482 SRETERLKSTWVNPRVVAPEESERVLGKAMEREYNLFDLLRRPGVDYDKLMGMNQGKYAC 541 Query: 520 -SICPD-ARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALS 577 + P+ + S VIE+++I + Y+ Y RQ E + E+ +P DFDY + ALS Sbjct: 542 ADVQPEALGELSVPVIEQVEIAAKYSGYIDRQKDEVERAAHFERLRLPLDFDYMQVAALS 601 Query: 578 NELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 E+++KL +P L QAS+I G+TPAA++LL++++KK K Sbjct: 602 FEVRQKLQKHRPETLGQASRISGVTPAAISLLMVHLKKGGFK 643 >gi|15600758|ref|NP_254252.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas aeruginosa PAO1] gi|21263691|sp|Q9HT09|MNMG_PSEAE RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|9951906|gb|AAG08950.1|AE004968_4 glucose-inhibited division protein A [Pseudomonas aeruginosa PAO1] Length = 630 Score = 799 bits (2064), Expect = 0.0, Method: Composition-based stats. Identities = 292/616 (47%), Positives = 382/616 (62%), Gaps = 5/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FDVIVIGGGHAGTEAALAAARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAEATDKGGIQFRILNSRKGPAVRATRAQADRVLYKAAIRHTLENQPNLWIFQQACD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 127 DLIVEQDQVRGVVTQMGLRFHADNVVLTTGTFLGGLIHIGLENYSGGRAGDPPSIALARR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + GRLKTGTP R+DG+++ + +Q D + SF+ K + Q+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGSKEQHPEQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+FLEPEGL T Sbjct: 247 TNARTHEIIAANLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFLEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R+I G+E +I+RPGYAIEYD+ +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVRSIRGMENAHIVRPGYAIEYDFFDPRDLRYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A +S D C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGANAALRSQGKDSWCPRRDEAYIGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + +RR F + LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDRRWAAFEAKREGIEREEQRLKSTWVR 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +I+ + LS P+ L I +A + V E+++I + Sbjct: 487 PNTPQGDAIAERFGTPLTHEYNLLNLLSRPEIDYAGLVEITGNAVD-NPQVAEQVEIRTK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E ++ E +P D DY + LS E++ KL+ +P L QAS+I G+ Sbjct: 546 YAGYIDRQQEEISRLRASEDTRLPVDIDYLGISGLSKEIQNKLNQARPETLGQASRIPGV 605 Query: 602 TPAALNLLLIYIKKNT 617 TPAA++LLLI++KK Sbjct: 606 TPAAISLLLIHLKKRA 621 >gi|270158240|ref|ZP_06186897.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Legionella longbeachae D-4968] gi|289163504|ref|YP_003453642.1| glucose-inhibited division protein A GidA [Legionella longbeachae NSW150] gi|269990265|gb|EEZ96519.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Legionella longbeachae D-4968] gi|288856677|emb|CBJ10488.1| putative glucose-inhibited division protein A GidA [Legionella longbeachae NSW150] Length = 624 Score = 799 bits (2064), Expect = 0.0, Method: Composition-based stats. Identities = 301/620 (48%), Positives = 409/620 (65%), Gaps = 3/620 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + + YDVI++GGGHAG EAA AA++G T L+TH +G MSCNPAIGG+GKGHLV+E Sbjct: 3 LEKLYDVIIVGGGHAGTEAALAAARMGMQTLLLTHNMDLLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDALDG M + AD AGIQFR+LN KGPAVR R QADR LYR A++ ++ +QENL + Q Sbjct: 63 IDALDGAMAKAADKAGIQFRILNASKGPAVRATRAQADRVLYRQAIREQLQTQENLTLFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E ++ ++ Q +R VVLT GTFL G IH+G + GR GD PS + Sbjct: 123 QAVDDLLIEGERVAGVITQMGFTLRARAVVLTVGTFLGGKIHVGMNQYAGGRAGDPPSVA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IEC 240 L S D GRLKTGTP R+D +++ +++ Q D + FS++ + Q I C Sbjct: 183 LAKSLRDLDLPVGRLKTGTPPRIDRRSLDYNQMIVQPGDTPIPVFSYLGHVSDHPQQIPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT T TH II N+ S +Y+G I+ GPRYCPSIEDKIVRF +++ HQIF+EPEGL Sbjct: 243 HITHTTEATHEIIRNNLHKSPMYAGVIEGVGPRYCPSIEDKIVRFADKSSHQIFVEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T+ +YPNGIST+LP E+Q QF+RTI G E +I RPGYAIEYDY +P+ L L+TK I Sbjct: 303 TTEEIYPNGISTSLPFEVQVQFVRTIKGFENAHITRPGYAIEYDYFDPRGLTSFLQTKPI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 LF AGQINGTTGYEEAAAQG++AG+N+A + + C R ++YIGV+IDDL ++G Sbjct: 363 PNLFFAGQINGTTGYEEAAAQGIIAGMNAALYVQEKELWCPRRDEAYIGVLIDDLITRGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT G +LG +GE R + FA + +SLL S Sbjct: 423 QEPYRMFTSRAEYRLLLREDNADLRLTAKGRELGIVGETRWQHFATKREAIESTQSLLHS 482 Query: 481 LVL-TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI-CPDARKFSSLVIERLQI 538 + S N + + A EFL P+ + +L + + + +S V E+++I Sbjct: 483 TWVRVSHNQILSDVLVNPMQHDTRAVEFLKRPEINYHHLLMLPDLNLPELASEVSEQIEI 542 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 ++ YA Y RQ + ++++ +E ++P+ DYS + LSNE+ +KL+ ++P L QAS+I Sbjct: 543 QNKYAGYIDRQQQDIEKMRKQENMVLPEWLDYSEVTGLSNEVIQKLTKIRPTTLAQASRI 602 Query: 599 EGMTPAALNLLLIYIKKNTV 618 G+TPAAL+LLL+++KK + Sbjct: 603 SGVTPAALSLLLVHLKKQRI 622 >gi|308051498|ref|YP_003915064.1| glucose inhibited division protein A [Ferrimonas balearica DSM 9799] gi|307633688|gb|ADN77990.1| glucose inhibited division protein A [Ferrimonas balearica DSM 9799] Length = 629 Score = 798 bits (2062), Expect = 0.0, Method: Composition-based stats. Identities = 279/620 (45%), Positives = 391/620 (63%), Gaps = 5/620 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 YDVIV+GGGHAG EAA +A+ GA T L+TH T+G MSCNPAIGG+GKGHLV+EID Sbjct: 5 EHYDVIVVGGGHAGTEAALASARTGARTLLLTHNLDTLGQMSCNPAIGGIGKGHLVKEID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M R D AGIQFR LN KGPAVR R QADR LYR A+Q+ + +Q NL + Q Sbjct: 65 ALGGAMARATDRAGIQFRTLNASKGPAVRATRAQADRALYRQAIQQILFNQPNLQIFQQG 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + ++ ++ VVLT GTFL G IHIG GR+GD+ + L Sbjct: 125 VNDLILEGDKVTGVITDAGIHFGAEAVVLTVGTFLDGKIHIGLDNYAGGRIGDTNAVRLA 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK-ITNRQIECGI 242 + + RLKTGTPARLD +++ + ++Q D FS++ D+ RQI C I Sbjct: 185 HRLRELPLRIDRLKTGTPARLDARSLDFSVMQEQPGDNPTPVFSYIGDRSEQPRQISCYI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II + S +Y+G I+ GPRYCPS+EDK++RF ++ HQIF+EPEGLN+ Sbjct: 245 THTNERTHEIIRSGLDRSPMYTGVIEGIGPRYCPSVEDKVMRFADKTSHQIFVEPEGLNS 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNGIST+LP ++Q + +R+I G E+ I+RPGYAIEYD+ +P++L +LE+K + G Sbjct: 305 IEIYPNGISTSLPFDVQLELVRSIKGFEQARILRPGYAIEYDFFDPRDLKASLESKFLEG 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEA AQGL+AG+N+AR+ + R +Y+GV++DDL++ G E Sbjct: 365 LFFAGQINGTTGYEEAGAQGLLAGLNAARRVRGEESWAPRRDQAYLGVLVDDLSTLGTQE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAE+R+ LR DNAD RLT +G ++G I + R +F ++ R L+S Sbjct: 425 PYRMFTSRAEHRLLLREDNADLRLTEMGREMGLIDDERWAKFNAKVEAIELERQRLRSTW 484 Query: 483 LTSKNLSSTSISF---KQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSL-VIERLQI 538 + + ++ +++ + + L P+ + + ++ E+++I Sbjct: 485 VQKDSAAAAALNPLLKSPMTREANLEDLLRRPELTYDQIMAVEDLGPALDHEQAAEQVEI 544 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + YA Y RQ E ++ + E+ L+P D DY + LSNE+ KL KP L AS+I Sbjct: 545 QVKYAGYIERQKDEIEKARRHEQTLLPLDLDYRQVKGLSNEVMAKLMEHKPETLGSASRI 604 Query: 599 EGMTPAALNLLLIYIKKNTV 618 G+TPAA++LLL+Y+KK+ + Sbjct: 605 SGVTPAAISLLLVYLKKHGL 624 >gi|146284513|ref|YP_001174666.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas stutzeri A1501] gi|166222723|sp|A4VS73|MNMG_PSEU5 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|145572718|gb|ABP81824.1| glucose-inhibited division protein A [Pseudomonas stutzeri A1501] Length = 630 Score = 798 bits (2062), Expect = 0.0, Method: Composition-based stats. Identities = 286/617 (46%), Positives = 390/617 (63%), Gaps = 5/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FDVIVIGGGHAGTEAALAAARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAVATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIRELLENQPNLWIFQQAAD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E+N + +V Q ++VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 127 DLIVEQNEVRGVVTQMGLRFLATSVVLTTGTFLGGLIHIGLQNYSGGRAGDPPSIALAKR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+DG+++ + + +Q D L SF+ + + + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSQMTEQPGDTPLPVMSFLGSREQHPPQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF +++ HQ+FLEPEGL T Sbjct: 247 TNARTHEIIAANLDRSPMYSGVIEGVGPRYCPSIEDKIHRFADKDSHQVFLEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +++I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVQSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGANAALRAQGKDSWCPRRDEAYLGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LK+ + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCAKREGIEREEQRLKNSWVR 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +I+ + + L+ P+ Q+L + + V E+++I++ Sbjct: 487 PGTPQGDAIAERFGSPLAREYNLLNLLARPEIDYQSLIELT-GPGEPDPQVAEQVEIKTK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E ++++ E +P D DY+++ LS E++ KL +P L QAS+I G+ Sbjct: 546 YAGYIERQQDEIEKLRASENVALPADLDYATISGLSKEIQHKLGQARPQTLGQASRIPGV 605 Query: 602 TPAALNLLLIYIKKNTV 618 TPAA++LL+I++KK + Sbjct: 606 TPAAVSLLMIHLKKRSA 622 >gi|332143484|ref|YP_004429222.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Alteromonas macleodii str. 'Deep ecotype'] gi|238693237|sp|B4RS92|MNMG_ALTMD RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|327553506|gb|AEB00225.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Alteromonas macleodii str. 'Deep ecotype'] Length = 633 Score = 798 bits (2062), Expect = 0.0, Method: Composition-based stats. Identities = 290/629 (46%), Positives = 394/629 (62%), Gaps = 7/629 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 ++DVIV+GGGHAG EAA AA++GA+T L+TH TIG MSCNPAIGG+GKGHLV+E Sbjct: 3 YTEAFDVIVVGGGHAGTEAALAAARMGANTLLLTHNIETIGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M D GIQFR LN KGPAVR R QADR LY+ A++ + +QENL + Q Sbjct: 63 IDALGGAMALAIDKGGIQFRTLNSSKGPAVRATRAQADRTLYKNAIRDIVENQENLTLFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E + + +V Q + +VVLT GTFL G IHIG GR GD PS + Sbjct: 123 QSVDDLIVENDRVCGVVTQMGLKFKAKSVVLTVGTFLGGTIHIGLENYRGGRAGDPPSIA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIEC 240 L + F RLKTGTPARLD +++ + + Q D FSFM D+ + QI C Sbjct: 183 LADRLRALPFRVDRLKTGTPARLDARSLDFSVMQPQPGDSPTPVFSFMGDRAMHPTQIPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH II + S +++G I+ GPRYCPSIEDKI RF ++ HQIF+EPEGL Sbjct: 243 YITHTNEKTHDIIRGGLDRSPMFTGVIEGIGPRYCPSIEDKITRFADKTSHQIFVEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 N+ VYPNGIST+LP ++Q +R+I G E +I+RPGYAIEYD+ +P++L TLETK I Sbjct: 303 NSIEVYPNGISTSLPFDVQMNLVRSIKGFENAHIVRPGYAIEYDFFDPRDLKQTLETKFI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQINGTTGYEEA AQGLVAG N+A + + D R +Y+GV+IDDL + G Sbjct: 363 QGLFFAGQINGTTGYEEAGAQGLVAGANAALQVQQKDPFILRRDQAYMGVLIDDLATMGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD+RLT +G ++G + + R ++ ++ L+ Sbjct: 423 KEPYRMFTSRAEYRLLLREDNADSRLTAMGREIGLVDDARWAKYNDKMEAVETELQRLRG 482 Query: 481 LVLTSKNLSSTSISF---KQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLV-IERL 536 + + ++ ++ + + E + P+ + L I + E++ Sbjct: 483 QWIHPDHAATPQLNTMLKNPVSREHSLEELIRRPEMTYSQLMKIESVGPGIDDPIAAEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ YA Y RQM E + + E L+P D D+S + LSNE+ KL+ +P + +AS Sbjct: 543 EIQIKYAGYIARQMDEIAKTQRHENTLLPIDMDFSKISGLSNEVVAKLTEARPETIGKAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNT--VKLNEI 623 +I G+TPAA++LLL+Y+KK+ K ++I Sbjct: 603 RISGITPAAISLLLVYLKKHGMLRKQDKI 631 >gi|269468172|gb|EEZ79871.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [uncultured SUP05 cluster bacterium] Length = 623 Score = 798 bits (2062), Expect = 0.0, Method: Composition-based stats. Identities = 298/618 (48%), Positives = 393/618 (63%), Gaps = 2/618 (0%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 ++ Y VIVIGGGHAG EAA +A++G +T LITH T+G MSCNPAIGG+GKGHLV+EI Sbjct: 4 SKHYSVIVIGGGHAGTEAALASARMGVNTLLITHNIETLGQMSCNPAIGGIGKGHLVKEI 63 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DA+ G M D AGIQFR LN KGPAVR R QADR LY+ +++ + +QE+L + Q Sbjct: 64 DAMGGAMATAIDKAGIQFRTLNASKGPAVRATRAQADRVLYKASIRYILENQEDLSLFQQ 123 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 V + N+I + Q V+LT+GTFL G+IHIG+ GR GD+PSN+L Sbjct: 124 AVDDLVIKDNVIKGVKTQMGLSFLADKVILTSGTFLGGMIHIGQSNFEGGRAGDAPSNAL 183 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECG 241 + +D GRLKTGTP RLDG+TI + + Q D L FSFM + QI C Sbjct: 184 SRTLRAYDLGVGRLKTGTPPRLDGRTIDFSVLQAQPGDTPLPTFSFMGKLSDHPDQIPCY 243 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT TN +TH I + +K S +Y+G+I+ GPRYCPSIEDK+VRF ER+ HQIF+EPEGL Sbjct: 244 ITHTNEKTHDFIRDGLKDSPMYTGNIEGIGPRYCPSIEDKVVRFAERDSHQIFVEPEGLT 303 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ VYPNG+ST+LP E+Q FI +I G E I+RPGYAIEYD+ +P+ L TLE KKIS Sbjct: 304 TNEVYPNGVSTSLPYEVQVDFIHSIKGFENAKIVRPGYAIEYDFFDPRGLKQTLEVKKIS 363 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GL+ AGQINGTTGYEEAAAQGL+AG+N+A + + R +SYIGVM+DDL +KG Sbjct: 364 GLYFAGQINGTTGYEEAAAQGLLAGVNAACSVQEKNPWHPKRDESYIGVMVDDLITKGTN 423 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+ LR DNAD RLTP +LG I + R + F K + + LKS Sbjct: 424 EPYRMFTSRAEYRLLLREDNADERLTPKARELGLIDDARWQAFEKKYKTVAQEKQRLKST 483 Query: 482 VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIES 540 + + + + + E L P S L I +I ++ + Sbjct: 484 WIQANDTQAGETLGLSLSHEYSLLELLKRPKVSYDTLSKIESGKPFLTDRTLIALVENQI 543 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ+ E ++ + E + DY S+ ALS E+++KLS KP + QAS+I+G Sbjct: 544 KYEGYIKRQLEEIEKYRKNEDTKLSGHMDYDSIKALSAEVRQKLSQYKPETIGQASRIQG 603 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPA++++LL+Y+K V Sbjct: 604 VTPASISILLVYLKTYKV 621 >gi|226327001|ref|ZP_03802519.1| hypothetical protein PROPEN_00861 [Proteus penneri ATCC 35198] gi|225204838|gb|EEG87192.1| hypothetical protein PROPEN_00861 [Proteus penneri ATCC 35198] Length = 633 Score = 798 bits (2062), Expect = 0.0, Method: Composition-based stats. Identities = 291/618 (47%), Positives = 394/618 (63%), Gaps = 7/618 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EID Sbjct: 5 EHFDVIVIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 A+ GLM D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NL + Q Sbjct: 65 AMGGLMATAIDHAGIQFRTLNASKGPAVRATRAQADRVLYRQAVRTTLENQPNLMIFQQP 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + ++ V + R +VVLT GTFL G IHIG GR GD PS SL Sbjct: 125 VEDLIVENDQVTGAVTRMGLKFRAKSVVLTVGTFLDGKIHIGLENYSGGRAGDPPSVSLS 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGI 242 + + GRLKTGTP R+D +TI + + Q D + FSF+ + + Q+ C I Sbjct: 185 HRLRELPLRVGRLKTGTPPRIDARTIDFSQLAVQLGDTPMPVFSFLGNVDQHPEQMPCHI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL + Sbjct: 245 TYTNEKTHEVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNSHQIFLEPEGLTS 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + +YPNGIST+LP ++Q Q + ++ G+E IIRPGYAIEYD+ +P++L TLE+K I+G Sbjct: 305 NEIYPNGISTSLPFDVQMQIVNSMKGMENAKIIRPGYAIEYDFFDPRDLKQTLESKFING 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQG++AG+N+AR + + R +YIGV++DDL + G E Sbjct: 365 LFFAGQINGTTGYEEAAAQGMLAGLNAARYAFDQEGWFPRRDQAYIGVLVDDLCTLGTKE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT IG +LG + + R F++ ++ R L+++ Sbjct: 425 PYRMFTSRAEYRLMLREDNADLRLTEIGRELGMVDDTRWAEFSEKVELVEKERQRLRNIW 484 Query: 483 LTSK--NLSSTSISFK-QDGKTRTAYEFLSYPDFSIQNLFSI---CPDARKFSSLVIERL 536 + + NLS + K K + L P+ + L +I P E++ Sbjct: 485 VHPQADNLSEINELLKTPLSKEANGEDLLRRPEMTYNILKNISRFAPGIDDSKPQAAEQV 544 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y Y RQ E ++ + E +P D DY + LSNE+ KL+ KP ++ QAS Sbjct: 545 EIQVKYEGYISRQQEEIEKKQRNENAALPIDLDYKQVSGLSNEVIAKLNDHKPTSIGQAS 604 Query: 597 KIEGMTPAALNLLLIYIK 614 +I G+TPAA+++LL+++K Sbjct: 605 RISGVTPAAISILLVWLK 622 >gi|120600846|ref|YP_965420.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shewanella sp. W3-18-1] gi|146295047|ref|YP_001185471.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shewanella putrefaciens CN-32] gi|166200614|sp|A4YCI9|MNMG_SHEPC RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|166200616|sp|A1RQC1|MNMG_SHESW RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|120560939|gb|ABM26866.1| glucose inhibited division protein A [Shewanella sp. W3-18-1] gi|145566737|gb|ABP77672.1| glucose inhibited division protein A [Shewanella putrefaciens CN-32] Length = 629 Score = 798 bits (2062), Expect = 0.0, Method: Composition-based stats. Identities = 290/622 (46%), Positives = 386/622 (62%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +DVIV+GGGHAG EAA AA++G+ T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 FHERFDVIVVGGGHAGTEAALAAARMGSKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M D AGIQFR LN KGPAVR R QADR LYR +Q + +Q NL + Q Sbjct: 63 IDALGGAMAIATDYAGIQFRTLNSSKGPAVRATRAQADRALYRQKIQNILQNQANLRIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E + + +V Q +VLTTGTFL G IHIG GR GD P+ + Sbjct: 123 QAVDDLIVENDRVVGVVTQMGLAFESPAIVLTTGTFLSGKIHIGLENYSGGRAGDPPAIA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIEC 240 L N + GRLKTGTP R+D TI + + +Q D L SFM D + QI C Sbjct: 183 LANRLRELPIRVGRLKTGTPPRIDANTIDFSQMAEQKGDSPLPVMSFMGDVSHHPKQISC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH II + S +YSG I+ GPRYCPSIEDKI RF +++ HQIF+EPEGL Sbjct: 243 WITHTNEKTHEIIRGGLDRSPMYSGVIEGIGPRYCPSIEDKIHRFSDKSSHQIFIEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 NT +YPNGIST+LP ++Q +R+I G+E I+RPGYAIEYDY +P++L +LETK I Sbjct: 303 NTTEIYPNGISTSLPFDVQLNLVRSIKGMENAEIVRPGYAIEYDYFDPRDLKNSLETKTI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 +GLF AGQINGTTGYEEAAAQGL+AG+N++ + D C R ++Y+GV++DDL++ G Sbjct: 363 NGLFFAGQINGTTGYEEAAAQGLLAGMNASLQVQGKDAWCPRRDEAYLGVLVDDLSTLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT G +LG + + R F++ ++ L++ Sbjct: 423 KEPYRMFTSRAEYRLLLREDNADIRLTAKGRELGLVDDIRWAAFSEKLESIELELQRLRA 482 Query: 481 LVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 + + +++ + + E L P+ L I L E++ Sbjct: 483 QWVHPNSPLIHALNPHLNTPISREASFEELLRRPEMDYSKLMQIEGFGPGLEDPLAAEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 QI+ Y+ Y RQ E + E +P DY +P LSNE+ KL+ KP + QAS Sbjct: 543 QIQVKYSGYIQRQQEEINKAVRNENTGLPLHLDYKEVPGLSNEVIAKLNSHKPETIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA+++LL+++KK + Sbjct: 603 RISGVTPAAISILLVHLKKRGL 624 >gi|295402128|ref|ZP_06812087.1| glucose inhibited division protein A [Geobacillus thermoglucosidasius C56-YS93] gi|312112751|ref|YP_003991067.1| glucose inhibited division protein A [Geobacillus sp. Y4.1MC1] gi|294975811|gb|EFG51430.1| glucose inhibited division protein A [Geobacillus thermoglucosidasius C56-YS93] gi|311217852|gb|ADP76456.1| glucose inhibited division protein A [Geobacillus sp. Y4.1MC1] Length = 629 Score = 798 bits (2062), Expect = 0.0, Method: Composition-based stats. Identities = 284/619 (45%), Positives = 395/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+G GHAGCEAA AA++GA T +IT I M CNP+IGG KG +VREIDA Sbjct: 7 SYDVIVVGAGHAGCEAALAAARIGAKTLVITLNLDMIAFMPCNPSIGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M R D IQ R+LN KGPAVR R QAD+ LY+ M++ + +QENL ++QG+V Sbjct: 67 LGGEMARNIDKTYIQMRMLNTGKGPAVRALRAQADKVLYQREMKKTLENQENLTLLQGKV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ + TVV+TTGTFLRG I IG +K +G PS L Sbjct: 127 ERLIVEDGVCKGVITHTGAHYYAKTVVITTGTFLRGEIIIGDIKYSSGPNNQQPSIKLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F+ R KTGTP R++ +TI + KTE Q D+ FS+ T + Q+ C +T Sbjct: 187 HLEELGFELVRFKTGTPPRVNSRTIDYSKTEIQPGDDVPRAFSYETTEYITDQLPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETHRII EN+ S +YSG IK GPRYCPSIEDKIVRF ++ HQIFLEPEG T+ Sbjct: 247 TTPETHRIIDENLHLSPMYSGMIKGTGPRYCPSIEDKIVRFHDKPRHQIFLEPEGRETEE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE IQ Q + TIPGLEK ++R GYAIEYD I P +L+PTLETK + L+ Sbjct: 307 VYVQGLSTSLPEHIQRQLLATIPGLEKAQLMRAGYAIEYDAIVPTQLWPTLETKLVKNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QG++AGIN+AR++ + I SR+D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGIMAGINAARRALGKEEIILSRSDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT +G K+G I E R ++F + + L++ ++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTELGYKIGLISEERYQKFLAKKEAIEREKKRLQTFIIK 486 Query: 485 S-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 K + S +DG A + L P+ + +++ + P + S V E+++I+ Sbjct: 487 PTPEVQKVIREAGGSELKDGIR--AADLLRRPEMTYEHIKQLAPAEEEISPEVAEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + + +K E + IP+D DY ++ L+ E ++KL ++P ++ QAS+I Sbjct: 545 IKYEGYIQKSLQQVERLKKMENKKIPEDIDYDAIHGLATEARQKLKQVRPLSIAQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+Y+++ + Sbjct: 605 GVNPADISILLVYLEQGRI 623 >gi|253987528|ref|YP_003038884.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253778978|emb|CAQ82138.1| trna uridine 5-carboxymethylaminomethyl modification enzyme gid (glucose-inhibited division protein a) [Photorhabdus asymbiotica] Length = 629 Score = 798 bits (2062), Expect = 0.0, Method: Composition-based stats. Identities = 284/620 (45%), Positives = 391/620 (63%), Gaps = 5/620 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EID Sbjct: 5 EQFDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL GLM + D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NL + Q Sbjct: 65 ALGGLMAKATDQAGIQFRTLNASKGPAVRATRAQADRVLYRQAIRTALENQPNLMIFQQP 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E +++ V + R VVLT GTFL G IHIG GR GD P+ SL Sbjct: 125 VEDLIVENDMVIGAVTRMGLKFRAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPAISLS 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGI 242 + RLKTGTP R+D +TI + + +Q D FSF+ + + Q + C I Sbjct: 185 QRLRELPLRVNRLKTGTPPRIDARTIDFSQLTQQLGDTPTPVFSFLGNAGQHPQQMPCYI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL + Sbjct: 245 THTNEKTHDVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLTS 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + +YPNGIST+LP ++Q Q + ++ G+E I+RPGYAIEYD+ +P++L TLE+K I G Sbjct: 305 NEIYPNGISTSLPFDVQMQIVHSMKGMENARIVRPGYAIEYDFFDPRDLKQTLESKFIHG 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AG+N+AR + + + R +YIGV++DDL + G E Sbjct: 365 LFFAGQINGTTGYEEAAAQGLLAGLNAARYATEEEGWFPRRDQAYIGVLVDDLCTLGTKE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT G KLG + + R + + + ++ R L+++ Sbjct: 425 PYRMFTSRAEYRLMLREDNADLRLTEKGRKLGLVDDSRWEHYCRKVEMIEQERQRLRNIW 484 Query: 483 LTSKNLSSTSIS---FKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQI 538 + + + I+ K + L P+ + + L S+ + ++++I Sbjct: 485 IHPHSNNLIDINDILKTPLSKEANGEDLLRRPEMNYELLTSLPLFSPGLKEPQTADQVEI 544 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + Y Y RQ E ++ E +P D DY + LSNE+ KL+ KP ++ QAS+I Sbjct: 545 QVKYEGYIARQQEEIEKQLRNENTSLPIDLDYCQISGLSNEVVAKLNDHKPSSIGQASRI 604 Query: 599 EGMTPAALNLLLIYIKKNTV 618 G+TPAA+++LL+++KK + Sbjct: 605 SGITPAAISILLVWLKKQGL 624 >gi|85712598|ref|ZP_01043645.1| NAD/FAD-utilizing enzyme apparently involved in cell division [Idiomarina baltica OS145] gi|85693589|gb|EAQ31540.1| NAD/FAD-utilizing enzyme apparently involved in cell division [Idiomarina baltica OS145] Length = 631 Score = 798 bits (2062), Expect = 0.0, Method: Composition-based stats. Identities = 288/620 (46%), Positives = 392/620 (63%), Gaps = 5/620 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++G+ T L+TH T+G MSCNPAIGG+GKGHLV+EID Sbjct: 7 QTYDVIVVGGGHAGTEAALAAARMGSRTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEID 66 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G+M + AD AGIQFR LN KGPAVR R QADR+LY+ A++ + +Q NL + Q Sbjct: 67 ALGGIMAKAADKAGIQFRTLNSSKGPAVRATRAQADRQLYKQAIRYALETQPNLTLFQQG 126 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 E + ++ +V Q VVLT GTFL G IHIG GR GD P+N+L Sbjct: 127 CDDLIVENDQVTGVVTQMGLKFHARAVVLTVGTFLGGRIHIGLDNYQGGRAGDPPANALS 186 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGI 242 RLKTGTP R+ +I + ++Q D FS++ + + Q I C I Sbjct: 187 QRLRALPLRVDRLKTGTPPRIASHSIDFSVMQEQPGDTPTPVFSYLGSRADHPQQIPCYI 246 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH +I + S +YSG+I+ GPRYCPSIEDKIVRF ++ HQIF+EPEGLNT Sbjct: 247 THTNEQTHDVIRSGLDRSPMYSGEIEGVGPRYCPSIEDKIVRFADKTSHQIFVEPEGLNT 306 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 VYPNGIST+LP ++Q Q +++I G E I RPGYAIEYDY +P++L +LETK I+G Sbjct: 307 FEVYPNGISTSLPFDVQQQLVQSIRGFENAVITRPGYAIEYDYFDPRDLKQSLETKVING 366 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEA AQGL+AG+N+AR + + R +Y+GV+IDDL++ G E Sbjct: 367 LFFAGQINGTTGYEEAGAQGLIAGLNAARLAQDKETWSPRRDQAYMGVLIDDLSTLGTQE 426 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT G +LG + + R + F ++ + L+S Sbjct: 427 PYRMFTSRAEYRLLLREDNADIRLTETGRELGLVDDERWQAFNLKMEAIEQEKQRLRSTW 486 Query: 483 LTSKNLSSTSISF---KQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQI 538 + + SI+ K + E L P+ + Q L A S E+++I Sbjct: 487 VHKDHPEIDSINAFVKSPITKEVSGEELLRRPEVNYQQLVKTPFFAPGLSDSAAAEQVEI 546 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 ++ YA Y RQ E + + E +P FDY+S+ LSNE+ KL+ +P + +A++I Sbjct: 547 QTKYAGYISRQQDEIAKQQRHENTRLPNQFDYTSIKGLSNEVIAKLNQHQPETVGKAARI 606 Query: 599 EGMTPAALNLLLIYIKKNTV 618 G+TPAA+++LL+++KK + Sbjct: 607 SGITPAAISMLLVHLKKQGL 626 >gi|327482902|gb|AEA86212.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas stutzeri DSM 4166] Length = 630 Score = 798 bits (2061), Expect = 0.0, Method: Composition-based stats. Identities = 286/617 (46%), Positives = 390/617 (63%), Gaps = 5/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FDVIVIGGGHAGTEAALAAARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAVATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAIRELLENQPNLWIFQQAAD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E+N + +V Q ++VVLTTGTFL G+IHIG GR GD PS +L Sbjct: 127 DLIVEQNEVRGVVTQMGLRFLATSVVLTTGTFLGGLIHIGLQNYSGGRAGDPPSIALAKR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGITR 244 + GRLKTGTP R+DG+++ + + +Q D L SF+ + + + C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGRSVDFSQMTEQPGDTPLPVMSFLGSREQHPPQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF +++ HQ+FLEPEGL T Sbjct: 247 TNARTHEIIAANLDRSPMYSGVIEGVGPRYCPSIEDKIYRFADKDSHQVFLEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +++I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 307 LYPNGISTSLPFDVQLQIVQSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVIGGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ D C R ++Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGANAALRAQGKDSWCPRRDEAYLGVLVDDLITLGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LK+ + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCAKREGIEREEQRLKNSWVR 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +I+ + + L+ P+ Q+L + + V E+++I++ Sbjct: 487 PGTPQGDAIAERFGSPLAREYNLLNLLARPEIDYQSLIELT-GPGEPDPQVAEQVEIKTK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E ++++ E +P D DY+++ LS E++ KL +P L QAS+I G+ Sbjct: 546 YAGYIERQQDEIEKLRASENVALPADLDYATISGLSKEIQHKLGQARPQTLGQASRIPGV 605 Query: 602 TPAALNLLLIYIKKNTV 618 TPAA++LL+I++KK + Sbjct: 606 TPAAVSLLMIHLKKRSA 622 >gi|117918461|ref|YP_867653.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shewanella sp. ANA-3] gi|166200615|sp|A0KR28|MNMG_SHESA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|117610793|gb|ABK46247.1| glucose inhibited division protein A [Shewanella sp. ANA-3] Length = 629 Score = 798 bits (2061), Expect = 0.0, Method: Composition-based stats. Identities = 290/622 (46%), Positives = 385/622 (61%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +DVIV+GGGHAG EAA AA++G+ T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 FHERFDVIVVGGGHAGTEAALAAARMGSKTLLLTHNLDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M D AGIQFR LN KGPAVR R QADR LYR +Q + +Q NL + Q Sbjct: 63 IDALGGAMAIATDYAGIQFRTLNSSKGPAVRATRAQADRALYRQKIQNILQNQANLRIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V + + + +V Q VVLT GTFL G IHIG GR GD PS + Sbjct: 123 QAVDDLVVDNDRVVGVVTQMGLAFEAPAVVLTAGTFLSGKIHIGLENYSGGRAGDPPSIA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIEC 240 L + + GRLKTGTP R+D TI + + +Q D L SFM D + QI C Sbjct: 183 LAHRLRELPIRVGRLKTGTPPRIDANTIDFTQMTEQKGDTPLPVMSFMGDVSHHPKQISC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH II + S +YSG I+ GPRYCPSIEDKI RF +++ HQIF+EPEGL Sbjct: 243 WITHTNEKTHDIIRGGLDRSPMYSGVIEGIGPRYCPSIEDKIHRFSDKSSHQIFIEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 NT+ +YPNGIST+LP ++Q +R+I G+E I+RPGYAIEYDY +P++L +LETK I Sbjct: 303 NTNEIYPNGISTSLPFDVQLNLVRSIQGMENAEIVRPGYAIEYDYFDPRDLKNSLETKTI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 +GLF AGQINGTTGYEEA AQGL+AG+N+A + + C R ++YIGV++DDL++ G Sbjct: 363 NGLFFAGQINGTTGYEEAGAQGLLAGMNAALQVQGKEAWCPRRDEAYIGVLVDDLSTLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT G +LG + + R F++ ++ L+S Sbjct: 423 KEPYRMFTSRAEYRLLLREDNADLRLTAKGRELGLVDDARWASFSEKMESIELELQRLRS 482 Query: 481 LVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 + + ++ + + E L P+ L I L E++ Sbjct: 483 QWIHPNSPLVPVLNPHLNTPISREASFEELLRRPEMDYSKLMQIEGFGPGLADPLAAEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 QI+ Y+ Y RQ E + E +P + DY +P LSNE+ KL+ KP + QAS Sbjct: 543 QIQVKYSGYIQRQQEEINKAVRNENTGLPLNLDYKEVPGLSNEVIAKLNSHKPETIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA+++LL+++KK + Sbjct: 603 RISGITPAAISILLVHLKKRGL 624 >gi|296330031|ref|ZP_06872515.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305676755|ref|YP_003868427.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Bacillus subtilis subsp. spizizenii str. W23] gi|296153070|gb|EFG93935.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305414999|gb|ADM40118.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Bacillus subtilis subsp. spizizenii str. W23] Length = 628 Score = 798 bits (2061), Expect = 0.0, Method: Composition-based stats. Identities = 269/619 (43%), Positives = 381/619 (61%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDVIVIG GHAG EAA +A+ GA T ++T + M CNP++GG KG +VREIDA Sbjct: 7 QYDVIVIGAGHAGVEAALASARQGAKTLVLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ M+ + + NL ++QG V Sbjct: 67 LGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFQYQHEMKNTLEKEPNLTMLQGIV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ Q + R VV+TTGT+LRG I +G L +G PS L Sbjct: 127 ERLIVEDGECRGVITQTGAHYRAKAVVMTTGTYLRGRIILGDLSYSSGPNNQQPSIKLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R+ +I + KTE Q D+ FS+ T + Q+ C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVKSDSIDYSKTEIQPGDDVPRAFSYETVEYITDQLPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ +TH II N+ S +YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSPKTHEIIDSNLHRSPMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q + + TIPGLE V ++R GYAIEYD I P +L+PTLETKKI+ L+ Sbjct: 307 VYVQGLSTSLPEDVQQRMLATIPGLENVQMMRAGYAIEYDAIVPTQLWPTLETKKITNLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QG++AGIN+ RK+ + + SR+D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGIMAGINAGRKALGKEEVILSRSDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT IG ++G I + R F K + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEIGHRIGLISDERYAAFEKKKAAIEAEKKRLHSVIIK 486 Query: 485 S-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + S S +DG T + + P+ + + + + P V E+++I+ Sbjct: 487 PSPENQEYIRSLGGSELKDGVRGT--DLMKRPEMNYETVTKLAPPEVPVPQDVAEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + +++K E + IP DY ++ ++ E ++KL ++P ++ QAS+I Sbjct: 545 VKYEGYIEKSLQQVEKLKKMENKKIPDRIDYDAIKGIATEARQKLKNVRPLSVAQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+Y+++ + Sbjct: 605 GVNPADISILLVYLEQGRI 623 >gi|222109270|ref|YP_002551534.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gida [Acidovorax ebreus TPSY] gi|254811509|sp|B9M9W3|MNMG_ACIET RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|221728714|gb|ACM31534.1| glucose inhibited division protein A [Acidovorax ebreus TPSY] Length = 657 Score = 798 bits (2061), Expect = 0.0, Method: Composition-based stats. Identities = 293/642 (45%), Positives = 395/642 (61%), Gaps = 23/642 (3%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + +DVIV+GGGHAG EAA AA++G+ T L+TH T+G MSCNP+IGG+GKGHLV+ Sbjct: 2 LYPQDFDVIVVGGGHAGTEAALAAARMGSRTLLLTHNIETLGQMSCNPSIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DAL G M D AGIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Sbjct: 62 EVDALGGAMALATDEAGIQFRILNSSKGPAVRATRAQADRILYKAAIRRMLENQPNLWLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + + V Q R VVLT GTFL G IH+G AGR GD P+ Sbjct: 122 QQAVDDLMVEGDRVVGAVTQVGIRFRSRAVVLTAGTFLDGKIHVGLNNYAAGRAGDPPAV 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERL--------IPFSFMTDK 232 SL + GRLKTGTP R+DG++I + + E+Q D FSFM + Sbjct: 182 SLSARLKELQLPQGRLKTGTPPRIDGRSIDFSQCEEQPGDGMPGGVNEGAVPVFSFMGNA 241 Query: 233 -ITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGH 291 + RQ+ C IT TN TH II S +++G I+ GPRYCPS+EDKI RF ++ H Sbjct: 242 AMHPRQVPCWITHTNARTHEIIRSGFDRSPMFTGKIEGVGPRYCPSVEDKINRFADKESH 301 Query: 292 QIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKEL 351 QIFLEPEGL T YPNGIST+LP +IQ+ +R++ GLE +I+RPGYAIEYDY +P+ L Sbjct: 302 QIFLEPEGLTTHEFYPNGISTSLPFDIQYDLVRSMRGLENAHILRPGYAIEYDYFDPRSL 361 Query: 352 FPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 + ET++I GLF AGQINGTTGYEEAAAQGL AGIN+A + +R ++Y+GV+ Sbjct: 362 KSSFETRQIQGLFFAGQINGTTGYEEAAAQGLFAGINAALQCRGERAWVPARDEAYLGVL 421 Query: 412 IDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEY 471 +DDL +KGV EPYRMFTSRAE+R+ LR DNAD RLT G ++G + + R F++ Sbjct: 422 VDDLITKGVTEPYRMFTSRAEFRLQLREDNADMRLTDAGRRMGLVDDARWDAFSRKRDAV 481 Query: 472 NFLRSLLKSLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPD---- 524 + LKS + +NL + + K ++ L PD L ++ Sbjct: 482 SRETERLKSTWVNPRNLPTVEAERVLGKAIEHEYNLFDLLRRPDVGYDALTTMDGGKYAS 541 Query: 525 -------ARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALS 577 + S+ VIE+++I + YA Y RQ E + EK +P+D DY + ALS Sbjct: 542 EAVSRETLGELSAPVIEQVEIAAKYAGYIERQRDEVQRAAHFEKLRLPEDLDYMQVAALS 601 Query: 578 NELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 E+++KL +P L QAS+I G+TPAA++LL++++KK K Sbjct: 602 IEVRQKLQKHRPETLGQASRISGVTPAAISLLMVHLKKGGFK 643 >gi|157377627|ref|YP_001476227.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shewanella sediminis HAW-EB3] gi|189039359|sp|A8G1X6|MNMG_SHESH RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|157320001|gb|ABV39099.1| glucose inhibited division protein A [Shewanella sediminis HAW-EB3] Length = 632 Score = 798 bits (2060), Expect = 0.0, Method: Composition-based stats. Identities = 289/622 (46%), Positives = 384/622 (61%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +DVIVIGGGHAG EAA AA++G+ T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 FHERFDVIVIGGGHAGTEAALAAARMGSKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M D AGIQFR LN KGPAVR R QADR LYR +Q + +Q NL + Q Sbjct: 63 IDALGGAMAIATDYAGIQFRTLNSSKGPAVRATRAQADRALYRAKIQEILQNQPNLRLFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E ++ +V Q VVLT GTFL G IHIG GR GD PS + Sbjct: 123 QAVDDLIVENGKVTGVVTQMGLAFEAPAVVLTAGTFLSGKIHIGMQNYSGGRAGDPPSIA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIEC 240 L + + GRLKTGTP R+D TI +D +Q D L SF+ D + RQ+ C Sbjct: 183 LADRLRELPIRIGRLKTGTPPRIDANTINFDLMTEQKGDTPLPVMSFIGDVSHHPRQVSC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +T TN TH II + S +YSG I+ GPRYCPSIEDKI RF +++ HQIF+EPEGL Sbjct: 243 FVTHTNERTHDIIRGGLDRSPMYSGIIEGVGPRYCPSIEDKINRFADKSSHQIFIEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 NT+ +YPNGIST+LP ++Q +R+I G+E IIRPGYAIEYDY +P++L +LETK I Sbjct: 303 NTNEIYPNGISTSLPFDVQLNLVRSIKGMENAEIIRPGYAIEYDYFDPRDLKNSLETKSI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQINGTTGYEEA AQGL+AG+N++ + + C R ++Y+GV++DDL++ G Sbjct: 363 QGLFFAGQINGTTGYEEAGAQGLLAGMNASLQVQGKESWCPRRDEAYLGVLVDDLSTLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT G ++G + E R +F K + L+S Sbjct: 423 KEPYRMFTSRAEYRLLLREDNADLRLTEKGHQIGLVDEDRWAKFNKKRESIELELQRLRS 482 Query: 481 LVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 + + ++ + + + + L P+ L S+ E++ Sbjct: 483 QWVHPNSPLLEVLNPELNTPISREASFEDLLRRPEMDYPKLMSLEGFGPALEDQRAAEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 QI+ Y+ Y RQ E + E +P + DY +P LSNE+ KL+ KP + QAS Sbjct: 543 QIQVKYSGYIQRQQDEIDKAIKHETTGLPLELDYQEVPGLSNEVIAKLNDHKPETIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I GMTPAA+++LL+++K+ + Sbjct: 603 RISGMTPAAISILLVHLKRRGL 624 >gi|329768828|ref|ZP_08260257.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Gemella sanguinis M325] gi|328838221|gb|EGF87834.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Gemella sanguinis M325] Length = 627 Score = 798 bits (2060), Expect = 0.0, Method: Composition-based stats. Identities = 278/624 (44%), Positives = 385/624 (61%), Gaps = 7/624 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIGGGHAG EAA +++ G ST +IT TIG M CNP++GG KG +VRE+D Sbjct: 6 KEYDVIVIGGGHAGIEAAYASSRKGVSTLMITINLDTIGFMPCNPSVGGPAKGIVVREVD 65 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL GLMGRVAD IQ ++LN KGPAVR R Q+D+ Y+L M+R + NLD+ Q Sbjct: 66 ALGGLMGRVADKTNIQSKMLNTAKGPAVRALRMQSDKVEYQLEMKRILEDTPNLDIEQAM 125 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E N + + + + TV++TTGT+LRG I IG +K +G PS L Sbjct: 126 VKELIIENNKVVGLKTMLGTAYKAKTVIITTGTYLRGEIVIGDIKYSSGPNHQMPSIDLP 185 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + FD R KTGTP R++ ++ + KT Q D FS+ T + Q+ C +T Sbjct: 186 KQLEELGFDLVRFKTGTPPRVNADSVDFSKTAIQPGDNEKHAFSYETTEYVEDQVPCWLT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II +N+ SA+YSG I+ GPRYCPSIEDK VRF ++ HQ+FLEPEG NT Sbjct: 246 YTNNSTHEIIDKNLGRSAMYSGVIQGTGPRYCPSIEDKYVRFNDKERHQLFLEPEGRNTK 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G+ST+LP+++Q + +I GLE I+R GYAIEYD INP L+PTLETK I GL Sbjct: 306 EIYVQGLSTSLPDDVQRDMVHSIAGLENAVIMRNGYAIEYDAINPTTLWPTLETKLIDGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGT+GYEEAA QG++AGIN+A K + + R ++YIGV+IDDL +KG EP Sbjct: 366 FTAGQINGTSGYEEAAGQGIMAGINAACKVLGEEPMILGRDEAYIGVLIDDLVTKGTNEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAE+R+ LR DNAD RLT K G I E R K+F LK+ + Sbjct: 426 YRLLTSRAEHRLLLRHDNADMRLTEKAYKYGLITEERYKKFCDKRNSVQNEIERLKTFRI 485 Query: 484 TS-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 T + L + + +DG A + L P+ S +N+ + D K + VIE+++I Sbjct: 486 TPTQKTLEKLQELNSAEIRDGI--LAIDMLRRPELSYENIMYLAEDDTKLARDVIEQVEI 543 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E Y Y + + + +++K + IPKD DY +P+L+ E +EKL + P + QAS+I Sbjct: 544 EVKYEGYIKKSLQQVEKLKKMNEMKIPKDLDYDDVPSLAIEAREKLKKVLPLTIGQASRI 603 Query: 599 EGMTPAALNLLLIYIKKNTVKLNE 622 G+ PA +++LL+++++ + +E Sbjct: 604 SGVNPADISILLVFLEQRRGRNDE 627 >gi|238899345|ref|YP_002925028.1| glucose-inhibited cell-division protein [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259495847|sp|C4K911|MNMG_HAMD5 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|229467106|gb|ACQ68880.1| glucose-inhibited cell-division protein [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 627 Score = 798 bits (2060), Expect = 0.0, Method: Composition-based stats. Identities = 285/617 (46%), Positives = 391/617 (63%), Gaps = 3/617 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVIVIGGGH+G EAA +A++G T L+TH T+G +SCNPAIGG+GKG LV+EIDA Sbjct: 6 QFDVIVIGGGHSGTEAAMASARMGCKTLLLTHNIDTLGQLSCNPAIGGIGKGQLVKEIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLMG AD A IQ R+LN KGPAV+ R Q DR +YR ++ + +Q NL + Q V Sbjct: 66 LGGLMGMAADKASIQSRILNASKGPAVKSTRVQLDRTVYRKVIRSALENQTNLSIFQQPV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + +++ V + ++VLT GTFL G IH+G AGR GD+ S SL + Sbjct: 126 DDLILKNDLVVGAVTKMGLKFHAKSIVLTVGTFLDGKIHLGLENYSAGRAGDTASISLAS 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGIT 243 K GRLKTGTP R+D ++I + + Q D L FSF+ + Q C IT Sbjct: 186 QLRKLPLRIGRLKTGTPPRIDARSINFKNLKIQLGDTPLPLFSFLGRQHPPLTQKPCHIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH II +N++ S +Y G I GPRYCPSIEDKI+RF +R+ HQIFLEPEGL ++ Sbjct: 246 YTNEKTHEIIQKNLERSPMYRGIIDGIGPRYCPSIEDKIIRFSDRSAHQIFLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q + +R+I G++ I+RPGYAIEYDY +P++L PTLE+K I GL Sbjct: 306 EIYPNGISTSLPFDVQLKIVRSIQGMKNAFIVRPGYAIEYDYFDPRDLKPTLESKHIQGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+ R + + R +YIGV++DDLT+ G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGLNAGRLARGEEGWFPLRNQAYIGVLVDDLTTLGTQEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT IG +LG + E R RF + ++ + L+S+ + Sbjct: 426 YRMFTSRAEYRLLLREDNADLRLTEIGYQLGLVDENRWCRFNQKVELIEQEKQRLRSIWI 485 Query: 484 TSKNLSSTSISFK-QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIESS 541 + + K + + L P+ + L S+ P ++ +++I+ Sbjct: 486 KPNSDNQIDQIIKSPLSRETNGEDLLRRPEVNYSLLTSLKPFLPSLENNEAGMQVEIQIK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y RQ E + E L+P FDYS + LSNE+ KL+ KP +L QAS+I G+ Sbjct: 546 YEGYIVRQKEEIAKQLRNENTLLPLSFDYSLISGLSNEVVSKLNDHKPISLGQASRISGI 605 Query: 602 TPAALNLLLIYIKKNTV 618 TPAA+++LL+++KK + Sbjct: 606 TPAAISILLVWLKKQGL 622 >gi|157373139|ref|YP_001481128.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Serratia proteamaculans 568] gi|205375714|sp|A8GLL0|MNMG_SERP5 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|157324903|gb|ABV44000.1| glucose inhibited division protein A [Serratia proteamaculans 568] Length = 629 Score = 798 bits (2060), Expect = 0.0, Method: Composition-based stats. Identities = 292/620 (47%), Positives = 394/620 (63%), Gaps = 5/620 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EID Sbjct: 5 EQFDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL GLM D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q Sbjct: 65 ALGGLMATAIDHAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQP 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + + V Q R VVLT GTFL G IHIG GR GD PS SL Sbjct: 125 VEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPSISLS 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGI 242 + RLKTGTP R+D ++I + Q D + FSFM + + Q+ C I Sbjct: 185 QRLRELPLRVNRLKTGTPPRIDARSIDFSVLAPQHGDTPIPVFSFMGNAGQHPEQMACYI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL + Sbjct: 245 TYTNEKTHDVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLTS 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + +YPNGIST+LP ++Q Q +R++ G++ IIRPGYAIEYD+ +P++L PTLE+K I G Sbjct: 305 NEIYPNGISTSLPFDVQMQIVRSMEGMQNARIIRPGYAIEYDFFDPRDLKPTLESKFIQG 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AG+N+ R +N+ + R +Y+GV++DDL++ G E Sbjct: 365 LFFAGQINGTTGYEEAAAQGLLAGLNAGRYANEDEGWSPRRDQAYLGVLVDDLSTLGTKE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT G +LG + + R RF++ ++ R L+ + Sbjct: 425 PYRMFTSRAEYRLMLREDNADLRLTEKGRELGLVDDARWARFSEKLEHIEQERQRLRDIW 484 Query: 483 LTS--KNLSSTSISFK-QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQI 538 + +N+ + K + E L P+ L S+ A + E+++I Sbjct: 485 MHPHAENVEQVNALLKAPLSREANGEELLRRPEMDYTQLTSVAAFAPPLADTQAAEQVEI 544 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + Y Y RQ E ++ + E ++P D DY + LSNE+ KL+ KP ++ QAS+I Sbjct: 545 QVKYEGYIARQQEEIEKQQRNENTVLPLDLDYQQVSGLSNEVIAKLNDHKPNSIGQASRI 604 Query: 599 EGMTPAALNLLLIYIKKNTV 618 G+TPAA+++LLI++KK + Sbjct: 605 SGITPAAISILLIWLKKQGL 624 >gi|332800541|ref|YP_004462040.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Tepidanaerobacter sp. Re1] gi|332698276|gb|AEE92733.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Tepidanaerobacter sp. Re1] Length = 628 Score = 798 bits (2060), Expect = 0.0, Method: Composition-based stats. Identities = 274/618 (44%), Positives = 379/618 (61%), Gaps = 3/618 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDV V+G GHAGCEAA A++G T +I M+CNP+IGG GKG++VREIDA Sbjct: 7 KYDVAVVGIGHAGCEAALATARMGLKTVAFAINLDSIALMACNPSIGGPGKGNMVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D IQ R+LN KKGPAVR R Q D+ Y AM+ + SQENLD++Q EV Sbjct: 67 LGGQMAINVDKTFIQVRMLNTKKGPAVRALRAQLDKRAYCAAMKYTVESQENLDIVQEEV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + +V + + V+LTTG +LRG I IG L +G G P+N L Sbjct: 127 VKILVEGEKVKGVVTKTGGVYEARAVILTTGVYLRGRIVIGDLSYSSGPSGLFPANELSK 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S + GR KTGTP R+ ++ + K Q D+ + PFS+ ++KI Q+ C +T Sbjct: 187 SLESLGLELGRFKTGTPPRIHKDSVDFSKMIIQPGDDVITPFSYTSEKIQREQVPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH+II EN+ + +Y+G+IK GPRYCPS+E KIV F ++ HQIF+EPEG T Sbjct: 247 TNETTHKIIAENLHRAPLYTGEIKGVGPRYCPSVEMKIVNFKDKKSHQIFIEPEGNGTRE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+ST+LP ++Q ++ GLE I+R GYAIEYD++ P +L PTLETK + GL+ Sbjct: 307 MYVQGLSTSLPADVQIAMTHSVKGLENAKIMRFGYAIEYDFVVPTQLKPTLETKAVQGLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 +AGQINGT+GYEEAAAQGL+AGIN+A K + + + SR+D+YIGV+IDDL +KGV EPY Sbjct: 367 MAGQINGTSGYEEAAAQGLIAGINAALKIKEKEPLVLSRSDAYIGVLIDDLVTKGVTEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RL IG +G I + R ++F K + + LKS+ +T Sbjct: 427 RILTSRAEYRLLLRQDNADLRLMDIGHSIGLISDDRYEKFLKKKRLIDDEIKRLKSIKIT 486 Query: 485 SK---NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 N T ++ + T E L P+ + L + D + VIE+++I ++ Sbjct: 487 PTAKVNEVLTGLNTAKLNSPSTLAELLKRPELDYEKLKVLDEDREQLPDDVIEQVEIATA 546 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y RQM + + K E + IP D DY + L E +EKL +KP ++ QAS+I G+ Sbjct: 547 YEGYIERQMSQVAQFKKMENKKIPDDIDYDEIYGLGFEAREKLKEVKPISIGQASRISGV 606 Query: 602 TPAALNLLLIYIKKNTVK 619 P+ + +LLIY++ K Sbjct: 607 NPSDVTVLLIYLETKRRK 624 >gi|212640676|ref|YP_002317196.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Anoxybacillus flavithermus WK1] gi|259495844|sp|B7GMV9|MNMG_ANOFW RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|212562156|gb|ACJ35211.1| Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme, GidA [Anoxybacillus flavithermus WK1] Length = 638 Score = 798 bits (2060), Expect = 0.0, Method: Composition-based stats. Identities = 284/619 (45%), Positives = 394/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+G GHAGCEAA AA++GAST +IT I M CNP+IGG KG +VREIDA Sbjct: 16 SYDVIVVGAGHAGCEAALAAARMGASTLVITLNLDMIAFMPCNPSIGGPAKGIVVREIDA 75 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ R+LN KGPAVR R QAD+ LY+ M++ + +QENL ++QG+V Sbjct: 76 LGGEMGKNIDKTHIQMRMLNTGKGPAVRALRAQADKFLYQQEMKKTLENQENLTLLQGKV 135 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ + VV+TTGTFLRG I IG +K +G PS L Sbjct: 136 EKLIVEDGVCKGVITHTGARYYAKAVVITTGTFLRGEIIIGDIKYSSGPNNQQPSIKLSE 195 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F+ R KTGTP R++ TI + KTE Q D+ FS+ T + Q+ C +T Sbjct: 196 HLEELGFELVRFKTGTPPRVNSHTIDYSKTEIQPGDDVPRAFSYETKQYITDQLPCWLTY 255 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETHRII EN+ S +YSG IK GPRYCPSIEDKIVRF ++ HQIFLEPEG +T Sbjct: 256 TTEETHRIIDENLHLSPMYSGMIKGTGPRYCPSIEDKIVRFHDKPRHQIFLEPEGRHTQE 315 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE IQ Q + TIPGLEK ++R GYAIEYD I P +L+PTLETK + L+ Sbjct: 316 VYVQGLSTSLPEHIQRQMLATIPGLEKAQLMRAGYAIEYDAIVPTQLWPTLETKVVQRLY 375 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+A K+ + + SR+++YIGV+IDDL +KG EPY Sbjct: 376 TAGQINGTSGYEEAAGQGLIAGINAACKALGKEELILSRSEAYIGVLIDDLVTKGTNEPY 435 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT IG K+G I + R ++F + + LKS ++ Sbjct: 436 RLLTSRAEYRLLLRHDNADLRLTEIGYKIGLISQERYEKFVAKKEAIEAEKKRLKSYIIK 495 Query: 485 S-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + S +DG A + L P+ + +++ I P + V E+++I+ Sbjct: 496 PTPQVQQLIRDVGGSELKDGIR--AADLLKRPEMTYEHIQMIAPAEQPIDPEVAEQVEIQ 553 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + +++K E + IP+D DY ++ L+ E ++KL ++P ++ QAS+I Sbjct: 554 IKYEGYIEKSLQQVEKLKKMENKKIPEDIDYDAITGLATEARQKLKQVRPLSIAQASRIS 613 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+Y+++ + Sbjct: 614 GVNPADISILLVYLEQGKI 632 >gi|153956502|ref|YP_001397267.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium kluyveri DSM 555] gi|219856805|ref|YP_002473927.1| hypothetical protein CKR_3462 [Clostridium kluyveri NBRC 12016] gi|189039335|sp|A5N450|MNMG_CLOK5 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|146349360|gb|EDK35896.1| GidA [Clostridium kluyveri DSM 555] gi|219570529|dbj|BAH08513.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 628 Score = 798 bits (2060), Expect = 0.0, Method: Composition-based stats. Identities = 269/623 (43%), Positives = 388/623 (62%), Gaps = 4/623 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + YDVIVIG GHAGCEA AA++G T + T +IG M CNP IGG KGHLVRE Sbjct: 4 FSERYDVIVIGAGHAGCEAGLAAARMGCRTLMCTMNLDSIGFMPCNPNIGGTAKGHLVRE 63 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G MG DA IQ R+LN KGPAV R QAD+ Y M+ + Q NLD+ Q Sbjct: 64 IDALGGEMGVNIDATFIQSRMLNTSKGPAVHSLRAQADKRNYSGRMKSVLERQHNLDLKQ 123 Query: 122 GEVAGFNTEKN-IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 EV G + + ++ ++ + T+VL+TGT+L+G + IG + +G G P+N Sbjct: 124 LEVVGIRIDNEGKVCGVITKNGAYFETKTIVLSTGTYLKGKVIIGDVSYSSGPNGFMPAN 183 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 L S + + R KTGTPAR++ +++ + K +Q D+R++PFSFM++ + +Q+ C Sbjct: 184 DLSQSLLDLGIEIRRFKTGTPARVNRRSVDFSKMIEQPGDKRIVPFSFMSENLDRKQVSC 243 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +T T T ++I ENI S +++G IKS GPRYCPSIEDKIVRF + HQIF+EPEG Sbjct: 244 YLTYTTENTTKVIRENINRSPLFNGSIKSVGPRYCPSIEDKIVRFPNKENHQIFIEPEGE 303 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 +T+ +Y +G ST++PE++Q RTI GLE V +R GYAIEYD INP +L PTLE KK+ Sbjct: 304 DTNELYVDGASTSMPEDVQIAMYRTIIGLENVEFLRTGYAIEYDCINPLQLRPTLEFKKV 363 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQ+NG++GYEEAA+QG++AGIN+A K + R+D+YIGV+IDDL +KG Sbjct: 364 EGLFGAGQLNGSSGYEEAASQGIIAGINAALKVKGKEPFILKRSDAYIGVLIDDLVTKGT 423 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRM TSR+EYR+ LR DNAD RLT +G K+G + + R ++ + +K+ Sbjct: 424 EEPYRMMTSRSEYRLILRQDNADLRLTEMGYKIGLVTKERYDKYLERKNSIETEIKRIKN 483 Query: 481 LVLTSKNLSST---SISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 L +T K S+ + K+ + YE + P+ L + D + + V E + Sbjct: 484 LYITPKKEVIEFLNSLGSSELKKSISLYELIKRPELDYFKLQLLDMDRPELNEDVQEEVN 543 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I S Y Y +Q+ + ++ K E + IP++ DY + L E +KL ++P ++ QAS+ Sbjct: 544 IISKYEGYIKKQLEQVQQFKKFENKFIPENIDYDEIKGLRIEANQKLKKIRPISIGQASR 603 Query: 598 IEGMTPAALNLLLIYIKKNTVKL 620 I G++PA +++LL+Y++K + Sbjct: 604 ISGVSPADISVLLVYLEKKHREK 626 >gi|121592462|ref|YP_984358.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Acidovorax sp. JS42] gi|205831484|sp|A1W207|MNMG_ACISJ RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|120604542|gb|ABM40282.1| glucose inhibited division protein A [Acidovorax sp. JS42] Length = 661 Score = 798 bits (2060), Expect = 0.0, Method: Composition-based stats. Identities = 293/646 (45%), Positives = 395/646 (61%), Gaps = 27/646 (4%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + +DVIV+GGGHAG EAA AA++G+ T L+TH T+G MSCNP+IGG+GKGHLV+ Sbjct: 2 LYPQDFDVIVVGGGHAGTEAALAAARMGSRTLLLTHNIETLGQMSCNPSIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DAL G M D AGIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Sbjct: 62 EVDALGGAMALATDEAGIQFRILNSSKGPAVRATRAQADRILYKAAIRRMLENQPNLWLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + + V Q R VVLT GTFL G IH+G AGR GD P+ Sbjct: 122 QQAVDDLMVEGDRVVGAVTQVGIRFRSRAVVLTAGTFLDGKIHVGLNNYAAGRAGDPPAV 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERL--------IPFSFM--- 229 SL + GRLKTGTP R+DG++I + + E+Q D FSFM Sbjct: 182 SLSARLKELQLPQGRLKTGTPPRIDGRSIDFSQCEEQPGDGMPGGVNEGQVPVFSFMAHA 241 Query: 230 --TDKITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGE 287 + RQ+ C IT TN TH II S +++G I+ GPRYCPS+EDKI RF + Sbjct: 242 YGGAAMHPRQVPCWITHTNARTHEIIRSGFDRSPMFTGKIEGVGPRYCPSVEDKINRFAD 301 Query: 288 RNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYIN 347 + HQIFLEPEGL T YPNGIST+LP +IQ+ +R++ GLE +I+RPGYAIEYDY + Sbjct: 302 KESHQIFLEPEGLTTHEFYPNGISTSLPFDIQYDLVRSMHGLENAHILRPGYAIEYDYFD 361 Query: 348 PKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSY 407 P+ L + ET++I GLF AGQINGTTGYEEAAAQGL AGIN+A + + +R ++Y Sbjct: 362 PRSLKSSFETRQIQGLFFAGQINGTTGYEEAAAQGLFAGINAALQCRGVGAWVPARDEAY 421 Query: 408 IGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKY 467 +GV++DDL +KGV EPYRMFTSRAE+R+ LR DNAD RLT G ++G + + R F++ Sbjct: 422 LGVLVDDLITKGVTEPYRMFTSRAEFRLQLREDNADMRLTEAGRRMGLVDDARWDAFSRK 481 Query: 468 IQEYNFLRSLLKSLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPD 524 + LKS + +NL + + K ++ L PD L ++ Sbjct: 482 RDAVSRETERLKSTWVNPRNLPTVEAERVLGKAIEHEYNLFDLLRRPDVGYDALTTMDGG 541 Query: 525 -----------ARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSL 573 + S+ VIE+++I + YA Y RQ E + EK +P+D DY + Sbjct: 542 KYASEAVSRETLGELSASVIEQVEIAAKYAGYIDRQRDEVQRAAHFEKLRLPEDLDYMQV 601 Query: 574 PALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 ALS E+++KL +P L QAS+I G+TPAA++LL++++KK K Sbjct: 602 AALSIEVRQKLQKHRPETLGQASRISGVTPAAISLLMVHLKKGGFK 647 >gi|20807573|ref|NP_622744.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Thermoanaerobacter tengcongensis MB4] gi|22095718|sp|Q8RAT8|MNMG1_THETN RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG 1; AltName: Full=Glucose-inhibited division protein A 1 gi|20516110|gb|AAM24348.1| NAD/FAD-utilizing enzyme apparently involved in cell division [Thermoanaerobacter tengcongensis MB4] Length = 633 Score = 798 bits (2060), Expect = 0.0, Method: Composition-based stats. Identities = 270/623 (43%), Positives = 389/623 (62%), Gaps = 5/623 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDV V+G GHAG EAA +A+LG ST I M+CNP+IGG K LVREIDA Sbjct: 7 EYDVCVVGLGHAGSEAALASARLGLSTVGFATNLDAIALMACNPSIGGPAKAQLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D + +Q R LN KGPAVR R Q D++LY++ M+ + QENLD+ Q E+ Sbjct: 67 LGGQMAINTDKSLLQMRTLNTSKGPAVRSLRAQVDKKLYQMNMKHTLERQENLDIKQAEI 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E N ++ +V + ++ +C ++TTGTFL+G + IG++ +G G P++ L Sbjct: 127 VDILVEDNKVTGVVTKLGAIYKCKACIITTGTFLKGRVIIGEVDFESGPSGLFPASELSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + + F R KTGTP R+D ++I + K E Q DE + PFSFM DKI Q+ C +T Sbjct: 187 ALKRLGFKLMRFKTGTPPRVDKRSIDFSKMEIQPGDEVITPFSFMHDKIEIEQMPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH+II +NI + +++G I G RYCPSIEDK+V+F R HQIF+EPEG +T Sbjct: 247 TNEKTHKIIRDNIHRAPLFTGAITGVGVRYCPSIEDKVVKFPHRERHQIFIEPEGRDTYE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+S++LPE++Q +F+RT+PGLE V ++RP YAIEYD I+P +L TLE+K I GL+ Sbjct: 307 MYVQGMSSSLPEDVQLEFLRTVPGLENVRVMRPAYAIEYDCIDPTQLKATLESKWIEGLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ+NGT+GYEEAAAQGL+AGIN+A K + R+ +YIG++IDDL +KG EPY Sbjct: 367 FAGQVNGTSGYEEAAAQGLMAGINAAMKILNKPPVVLDRSQAYIGILIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSRAEYR+ LR DNAD RLT IG ++G + E R ++F + + L ++++ Sbjct: 427 RMLTSRAEYRLLLRQDNADFRLTEIGKEIGLVTEERYEKFLRKKIQLEKEMRRLSTVMVR 486 Query: 485 SKNLSSTSISFKQDGKTRT---AYEFLSYPDFSIQNLFSICPDAR-KFSSLVIERLQIES 540 + + + + Y L P+ ++ + PD V E++ I Sbjct: 487 PTEEVNNFLISRGSTPLVSGVDLYTLLKRPEVDYKSTKFLDPDRPDDILDSVAEQIDINI 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y +Q+ + ++ K E + IP+D DY + LSNE KEKLS ++P ++ QAS+I G Sbjct: 547 KYEGYILKQLRQVEQFKAMENKKIPEDIDYYQISGLSNEAKEKLSKIRPTSVGQASRISG 606 Query: 601 MTPAALNLLLIYIKK-NTVKLNE 622 ++PA +++LLIY+++ K NE Sbjct: 607 VSPADISVLLIYLQQMRKKKSNE 629 >gi|326562695|gb|EGE12997.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Moraxella catarrhalis 103P14B1] gi|326574202|gb|EGE24150.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Moraxella catarrhalis 101P30B1] gi|326574987|gb|EGE24916.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Moraxella catarrhalis O35E] Length = 632 Score = 798 bits (2060), Expect = 0.0, Method: Composition-based stats. Identities = 298/626 (47%), Positives = 396/626 (63%), Gaps = 8/626 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 +++DVIVIGGGHAG EA AA++GA+T LITH T+G MSCNPAIGG+GK HLVRE+D Sbjct: 10 KTFDVIVIGGGHAGTEACLAAARMGANTLLITHNIETLGQMSCNPAIGGIGKSHLVREVD 69 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D AGIQFRVLN +KG AVR R QADR LY+ A++ + +Q NL + Q Sbjct: 70 ALGGAMALATDKAGIQFRVLNSRKGAAVRATRAQADRILYKAAIRHTLENQPNLTIFQQS 129 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E ++V + VVLT+GTFL GVIH+G GR GD P+ L Sbjct: 130 VDDIIVENTRAVAVVTATGIRLNTRAVVLTSGTFLGGVIHVGLDHQSGGRAGDMPAIRLA 189 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + + GRLKTGTPAR+D +T+ + Q D L S+M D + RQI C I Sbjct: 190 DRLRELKLPVGRLKTGTPARIDARTVDFSVMTVQSGDTPLPVMSYMGDVAMHPRQINCYI 249 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II N+ S ++SG I+ GPRYCPSIEDKI RF +++ HQIF+EPEGL T Sbjct: 250 THTNERTHEIIRANLDRSPMFSGKIEGVGPRYCPSIEDKIHRFADKDSHQIFIEPEGLTT 309 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNGIST+LP ++Q +FI ++ GLE +I RPGYAIEYDY +P+ L PTLETK I Sbjct: 310 HELYPNGISTSLPFDVQLEFIHSMKGLENAHITRPGYAIEYDYFDPQNLKPTLETKSIDA 369 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQINGTTGYEEAAAQGL+AG+N+AR + R ++Y+GV++DDL + G E Sbjct: 370 LYFAGQINGTTGYEEAAAQGLLAGLNAARMALDEPSWVPQRHEAYLGVLVDDLITHGTKE 429 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAE+R+ LR DNAD RLT IG +LG + + R RF++ ++ + LK + Sbjct: 430 PYRMFTSRAEHRLILREDNADARLTAIGRELGLVDDERWARFSQKMESIASETARLKDIW 489 Query: 483 LTSKNLSSTSISFKQ---DGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 T N K + + L P+ + ++ + S+ V E+++I Sbjct: 490 ATPNNAIGQDFMANTGEILTKENSLLDLLKRPNIAFDDIAKV--SDSTVSAKVGEQIEIS 547 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ E +++K E L+P DFDY S+ LSNE+ +KLS ++P L QAS+I Sbjct: 548 VKYQGYIERQNDEIEQMKRLENTLLPLDFDYKSVSGLSNEIVQKLSQIRPTTLGQASRIS 607 Query: 600 GMTPAALNLLLIYIKKNTVKLNEIVL 625 G+TPAA++LL + IKK +K + V+ Sbjct: 608 GVTPAAVSLLAMTIKK--LKKTQAVM 631 >gi|228474143|ref|ZP_04058880.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus hominis SK119] gi|314935197|ref|ZP_07842550.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus hominis subsp. hominis C80] gi|228271838|gb|EEK13175.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus hominis SK119] gi|313656532|gb|EFS20271.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus hominis subsp. hominis C80] Length = 625 Score = 798 bits (2060), Expect = 0.0, Method: Composition-based stats. Identities = 281/624 (45%), Positives = 391/624 (62%), Gaps = 7/624 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + + YDVIVIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VRE Sbjct: 1 MVQEYDVIVIGAGHAGIEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R I ++NLD++Q Sbjct: 61 IDALGGQMAKAIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEDNLDIMQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G V E + + + + VV+TTGTFLRG I +G +K +G PS S Sbjct: 121 GMVDELLIENDEVKGVRTNIGTEYHAKAVVITTGTFLRGEIILGNMKYSSGPNHQLPSIS 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L ++ + F+ R KTGTP R++ KTI + KTE Q D+ FSF T + Q+ C Sbjct: 181 LADNLRELGFEVVRFKTGTPPRVNSKTIDYSKTEIQPGDDVGRAFSFETTEYILDQLPCW 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN TH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG N Sbjct: 241 LTYTNDRTHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRN 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETK I Sbjct: 301 TNEVYVQGLSTSLPEHVQRQMLATIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKMIK 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 L+ AGQINGT+GYEEAA QG++AGIN+A SR+D+YIGV+IDDL +KG Sbjct: 361 NLYTAGQINGTSGYEEAAGQGIMAGINAAGNVLGTGEKILSRSDAYIGVLIDDLVTKGTN 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAEYR+ LR DNAD RLT IG LG I E R RF Q+ L ++ Sbjct: 421 EPYRLLTSRAEYRLLLRHDNADLRLTDIGYDLGMISEERYARFNDKRQQIQDEIDRLSNI 480 Query: 482 VLTSKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 + + + S +DG A + L P+ + + I + + V E++ Sbjct: 481 RIKPNEHTQSVIEAHGGSRLKDGI--LAIDLLRRPEMTYNTILEILEETHQLPEAVEEQV 538 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I++ Y Y + + + +++K E++ IP+D DYS + +L+ E +EKLS +KP N+ QAS Sbjct: 539 EIQTKYEGYINKSLQQVEKVKRMEEKKIPEDLDYSKVDSLATEAREKLSEVKPLNIAQAS 598 Query: 597 KIEGMTPAALNLLLIYIKKNTVKL 620 +I G+ PA +++LL+Y+++ ++ Sbjct: 599 RISGVNPADISILLVYLEQGKLQR 622 >gi|241766013|ref|ZP_04763934.1| glucose inhibited division protein A [Acidovorax delafieldii 2AN] gi|241364012|gb|EER59268.1| glucose inhibited division protein A [Acidovorax delafieldii 2AN] Length = 660 Score = 797 bits (2059), Expect = 0.0, Method: Composition-based stats. Identities = 293/647 (45%), Positives = 394/647 (60%), Gaps = 23/647 (3%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + +DVIV+GGGHAG EAA AA++G+ T L+TH T+G MSCNP+IGG+GKGHLV+ Sbjct: 2 LYPQEFDVIVVGGGHAGTEAALAAARMGSRTLLLTHNIETLGQMSCNPSIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DAL G M D GIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Sbjct: 62 EVDALGGAMALATDEGGIQFRILNSSKGPAVRATRAQADRILYKAAIRRMLENQPNLWLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + + V Q R TVVLT GTFL G IH+G AGR GD P+ Sbjct: 122 QQAVDDLMVEGDRVVGAVTQVGIRFRSRTVVLTAGTFLDGKIHVGLNNYAAGRAGDPPAV 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERL--------IPFSFMTDK 232 SL + GRLKTGTP R+DG++I + K E+Q D FSFM Sbjct: 182 SLSARLKELKLPQGRLKTGTPPRIDGRSIDFSKCEEQPGDGMPGGVNEGTVPVFSFMGSA 241 Query: 233 -ITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGH 291 + +Q+ C IT TN TH II S +++G I+ GPRYCPS+EDKI RF +++ H Sbjct: 242 TMHPKQMPCWITHTNERTHEIIRSGFDRSPMFTGKIEGVGPRYCPSVEDKINRFADKDSH 301 Query: 292 QIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKEL 351 QIFLEPEGL T YPNGIST+LP +IQ+ +R++PGLE +I+RPGYAIEYDY +P+ L Sbjct: 302 QIFLEPEGLTTHEFYPNGISTSLPFDIQYDLVRSMPGLENAHILRPGYAIEYDYFDPRSL 361 Query: 352 FPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 + ET++I GLF AGQINGTTGYEEAAAQGL AGIN+A + R ++Y+GV+ Sbjct: 362 KSSFETRQIQGLFFAGQINGTTGYEEAAAQGLFAGINAALQCRGDAPWLPGRDEAYLGVL 421 Query: 412 IDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEY 471 +DDL +KGV EPYRMFTSRAE+R+ LR DNAD RLT +G ++G + + R F++ Sbjct: 422 VDDLITKGVTEPYRMFTSRAEFRLQLREDNADMRLTEVGRQMGLVDDARWNAFSRKRDAV 481 Query: 472 NFLRSLLKSLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPD---- 524 + LK+ + +NL S + K +E L PD S NL S+ Sbjct: 482 SRETERLKATWVNPRNLPAAESERVLGKSIEHEYNLFELLRRPDVSYANLMSLDGGKYAS 541 Query: 525 -------ARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALS 577 + V+E+++I + YA Y RQ E + EK +P D DY + ALS Sbjct: 542 SGVSRETLGDLTEPVLEQVEIAAKYAGYIDRQKGEVERAAHFEKLRLPPDLDYMQVTALS 601 Query: 578 NELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVKLNEIV 624 E ++ L+ +P L AS+I G+TPA+++LL++++KK K + Sbjct: 602 IEARQVLNRHRPETLGHASRITGITPASISLLMVHLKKGGFKEFAVA 648 >gi|270264085|ref|ZP_06192352.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Serratia odorifera 4Rx13] gi|270041734|gb|EFA14831.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Serratia odorifera 4Rx13] Length = 629 Score = 797 bits (2059), Expect = 0.0, Method: Composition-based stats. Identities = 291/619 (47%), Positives = 394/619 (63%), Gaps = 5/619 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA Sbjct: 6 QFDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLM D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q V Sbjct: 66 LGGLMATAIDHAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQPV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + V Q R VVLT GTFL G IHIG GR GD PS SL Sbjct: 126 EDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPSISLSQ 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGIT 243 + RLKTGTP R+D +TI + Q D + FSFM + + Q+ C IT Sbjct: 186 RLRELPLRVNRLKTGTPPRIDARTIDFSVLAPQHGDTPIPVFSFMGNANQHPEQMACYIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 246 HTNEKTHDVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q Q +R++ G++ I+RPGYAIEYD+ +P++L PTLE+K I GL Sbjct: 306 EIYPNGISTSLPFDVQMQIVRSMEGMQNARIVRPGYAIEYDFFDPRDLKPTLESKFIQGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+ R +N+ + R +Y+GV++DDL++ G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGLNAGRYANEDEGWSPRRDQAYLGVLVDDLSTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT G +LG + + R RF++ ++ R L+ + + Sbjct: 426 YRMFTSRAEYRLMLREDNADLRLTEKGRELGLVDDARWARFSEKLEHIEQERQRLRDIWM 485 Query: 484 TS--KNLSSTSISFK-QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIE 539 +N+ + K + E L P+ L ++ A + E+++I+ Sbjct: 486 HPHAENVEQVNALLKAPLSREANGEELLRRPEMDYALLTTVAAFAPPLVDTQAAEQVEIQ 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ E ++ + E ++P D DY + LSNE+ KL+ KP ++ QAS+I Sbjct: 546 VKYEGYIARQQEEIEKQQRNENTVLPLDLDYQQVSGLSNEVIAKLNDHKPNSIGQASRIS 605 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+TPAA+++LLI++KK + Sbjct: 606 GITPAAISILLIWLKKQGL 624 >gi|24376230|ref|NP_720274.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shewanella oneidensis MR-1] gi|81170576|sp|Q8E8A9|MNMG_SHEON RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|24351293|gb|AAN57717.1|AE015908_2 glucose-inhibited division protein A [Shewanella oneidensis MR-1] Length = 629 Score = 797 bits (2059), Expect = 0.0, Method: Composition-based stats. Identities = 290/622 (46%), Positives = 385/622 (61%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +DVIV+GGGHAG EAA AA++G+ T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 FHERFDVIVVGGGHAGTEAALAAARMGSKTLLLTHNLDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M D AGIQFR LN KGPAVR R QADR LYR +Q + +Q NL + Q Sbjct: 63 IDALGGAMAIATDYAGIQFRTLNSSKGPAVRATRAQADRALYRQKIQNILQNQANLRIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E + + +V Q S VVLT GTFL G IHIG GR GD PS + Sbjct: 123 QAVDDIVVENDHVVGVVTQMGLAFEASAVVLTAGTFLSGKIHIGLENYSGGRAGDPPSIA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIEC 240 L + + GRLKTGTP R+D TI + + +Q D L SFM D + QI C Sbjct: 183 LAHRLRELPIRVGRLKTGTPPRIDANTIDFSQMTEQKGDTPLPVMSFMGDVSHHPKQISC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH II + S +YSG I+ GPRYCPSIEDKI RF +++ HQIF+EPEGL Sbjct: 243 WITHTNEKTHDIIRGGLDRSPMYSGVIEGIGPRYCPSIEDKIHRFSDKSSHQIFIEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T+ +YPNGIST+LP ++Q +R+I G+E I+RPGYAIEYDY +P++L +LETK I Sbjct: 303 TTNEIYPNGISTSLPFDVQLNLVRSIKGMENAEIVRPGYAIEYDYFDPRDLKNSLETKTI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 +GLF AGQINGTTGYEEA AQGL+AG+N++ + + C R ++YIGV++DDL++ G Sbjct: 363 NGLFFAGQINGTTGYEEAGAQGLLAGMNASLQVQGKEAWCPRRDEAYIGVLVDDLSTLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT G +LG + + R F++ ++ L+S Sbjct: 423 KEPYRMFTSRAEYRLLLREDNADLRLTAKGRELGLVDDARWAAFSEKMESIELELQRLRS 482 Query: 481 LVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 + + ++ + + E L P+ L I L E++ Sbjct: 483 QWIHPNSPLVPVLNPHLNTPISREASFEELLRRPEMDYNKLMQIEGFGPGLADPLAAEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 QI+ Y+ Y RQ E + E +P + DY +P LSNE+ KL+ KP + QAS Sbjct: 543 QIQVKYSGYIQRQQEEINKAVRNENTGLPLNLDYKEVPGLSNEVIAKLNSHKPETIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA+++LL+++KK + Sbjct: 603 RISGITPAAISILLVHLKKRGL 624 >gi|120608762|ref|YP_968440.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Acidovorax citrulli AAC00-1] gi|166221316|sp|A1TI78|MNMG_ACIAC RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|120587226|gb|ABM30666.1| glucose inhibited division protein A [Acidovorax citrulli AAC00-1] Length = 655 Score = 797 bits (2058), Expect = 0.0, Method: Composition-based stats. Identities = 289/642 (45%), Positives = 393/642 (61%), Gaps = 23/642 (3%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + +DVIV+GGGHAG EAA AA++G+ T L+TH T+G MSCNP+IGG+GKGHLV+ Sbjct: 2 LYPQEFDVIVVGGGHAGTEAALAAARMGSRTLLLTHNIETLGQMSCNPSIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DAL G M D GIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Sbjct: 62 EVDALGGAMALATDEGGIQFRILNSSKGPAVRATRAQADRILYKAAIRRMLENQPNLWLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + + + Q R TVVLT GTFL G IH+G AGR GD P+ Sbjct: 122 QQAVDDLMVEGDRVVGAITQVGIRFRARTVVLTAGTFLDGKIHVGLNNYSAGRAGDPPAV 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERL--------IPFSFM-TD 231 SL + GRLKTGTP R+DG++I + + E+Q D FSFM + Sbjct: 182 SLSARLKELQLPQGRLKTGTPPRIDGRSIDFSQCEEQPGDGMPGGVNEGTLPVFSFMGST 241 Query: 232 KITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGH 291 + RQ+ C IT TN TH II S +++G I+ GPRYCPS+EDKI RF +++ H Sbjct: 242 AMHPRQVPCWITHTNERTHEIIRSGFDRSPMFTGKIEGVGPRYCPSVEDKINRFADKDSH 301 Query: 292 QIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKEL 351 QIFLEPEGL T YPNGIST+LP ++Q+ +R++ GLE +I+RPGYAIEYDY +P+ L Sbjct: 302 QIFLEPEGLTTHEFYPNGISTSLPFDVQYDLVRSMRGLENAHILRPGYAIEYDYFDPRSL 361 Query: 352 FPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 ET++I GLF AGQINGTTGYEEAAAQGL AGIN+A + R ++Y+GV+ Sbjct: 362 KSNFETRQIQGLFFAGQINGTTGYEEAAAQGLFAGINAALQCRGESAWLPRRDEAYLGVL 421 Query: 412 IDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEY 471 ++DL +KGV EPYRMFTSRAE+R+ LR DNAD RLT G ++G + + R F++ Sbjct: 422 VNDLITKGVTEPYRMFTSRAEFRLQLREDNADMRLTEAGRRMGLVDDARWDAFSRKRDAV 481 Query: 472 NFLRSLLKSLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPD---- 524 LKS + +NL S + K ++ L PD + L + Sbjct: 482 ARETERLKSTWVNPRNLPAEESARVLGKSIEHEYNLFDLLRRPDVTYDALTGMDGGKYAS 541 Query: 525 -------ARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALS 577 + S+ VIE+++I + YA Y RQ E + + E +P++ DY + ALS Sbjct: 542 TAVSRETLGELSAPVIEQVEIAAKYAGYIDRQKDEVQRAFYYENLQLPQELDYMQVAALS 601 Query: 578 NELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 E+++KL +P L QAS+I G+TPAA++LLL+++KK + Sbjct: 602 IEVRQKLQKHRPETLGQASRISGVTPAAVSLLLVHLKKGGFR 643 >gi|330505867|ref|YP_004382736.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Pseudomonas mendocina NK-01] gi|328920153|gb|AEB60984.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas mendocina NK-01] Length = 631 Score = 797 bits (2058), Expect = 0.0, Method: Composition-based stats. Identities = 288/617 (46%), Positives = 386/617 (62%), Gaps = 5/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 8 FDVIVIGGGHAGTEAALAAARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 68 GGAMATATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAVREILENQANLWIFQQAAD 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + +V Q ++VVLTTGTFL G+IHIG GR GD PS +L + Sbjct: 128 DLIVENAEVKGVVTQMGLRFHANSVVLTTGTFLGGLIHIGLQNYSGGRAGDPPSIALAHR 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT-NRQIECGITR 244 + GRLKTGTP R+DG+++ + +Q D SF+ + +QI C IT Sbjct: 188 LRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPTPLMSFLGKREHQPKQISCWITH 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF +++ HQ+F+EPEGL T Sbjct: 248 TNARTHEIIAANLDRSPMYSGVIEGVGPRYCPSIEDKIHRFADKDSHQVFIEPEGLTTHE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q Q +R+I G+E +I+RPGYAIEYDY +P++L +LETK I GLF Sbjct: 308 LYPNGISTSLPFDVQLQVVRSIRGMENAHIMRPGYAIEYDYFDPRDLKYSLETKVIGGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG N+A ++ + C R ++YIGV++DDL + G EPY Sbjct: 368 FAGQINGTTGYEEAGAQGLLAGCNAALRAQGKEAWCPRRDEAYIGVLVDDLITLGTQEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS + Sbjct: 428 RMFTSRAEYRLILREDNADLRLTEKGRELGLVDDERWAAFEAKREGIAKEEQRLKSTWVR 487 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +I+ + L+ P+ L + +A + V E+++I++ Sbjct: 488 PGTPQGDAIAARFGTPLTHEYNLLNLLARPEIDYATLVELT-EAPVVDNQVAEQVEIKTK 546 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ E +++ E +P+D DYS++ LS E++ KL +P L QA +I G+ Sbjct: 547 YAGYIDRQQDEIAKLRASEDTKLPEDLDYSAISGLSKEIQFKLGNTRPATLGQAGRIPGV 606 Query: 602 TPAALNLLLIYIKKNTV 618 TPAA++LLLI++KK + Sbjct: 607 TPAAISLLLIHLKKRSA 623 >gi|315659999|ref|ZP_07912857.1| glucose inhibited division protein A [Staphylococcus lugdunensis M23590] gi|315494900|gb|EFU83237.1| glucose inhibited division protein A [Staphylococcus lugdunensis M23590] Length = 626 Score = 797 bits (2058), Expect = 0.0, Method: Composition-based stats. Identities = 282/624 (45%), Positives = 397/624 (63%), Gaps = 7/624 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + ++YDVIVIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VRE Sbjct: 1 MTQNYDVIVIGAGHAGIEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R I + +LD++Q Sbjct: 61 IDALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEAHLDIMQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G V E N++ + + VV+TTGTFLRG I +G +K +G PS + Sbjct: 121 GMVDDLIIEDNVVKGVRTNIGTEYHAKAVVITTGTFLRGEIILGNMKYSSGPNHQLPSIT 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L ++ + F+ R KTGTP R++ KTI + KTE Q D+ FSF T + Q+ C Sbjct: 181 LADNLRELGFEVVRFKTGTPPRVNAKTIDYSKTEIQPGDDVGRAFSFETTEYILDQLPCW 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN ETH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG N Sbjct: 241 LTYTNGETHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRN 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETKKI Sbjct: 301 TNEVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKKIK 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 L+ AGQINGT+GYEEAA QG++AGIN+A K SR+D+YIGV+IDDL +KG Sbjct: 361 NLYTAGQINGTSGYEEAAGQGIMAGINAAGKVLGTGEKILSRSDAYIGVLIDDLVTKGTN 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAEYR+ LR DNAD RLT IG +LG I E R RF + Q+ L + Sbjct: 421 EPYRLLTSRAEYRLLLRHDNADLRLTDIGYELGMISEARYARFNEKRQQIQDEIDRLTHI 480 Query: 482 VLTSKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 + + + S +DG A + L P+ + + I +A + V E++ Sbjct: 481 RIKPNAHTQSVIEAHGGSQLKDGI--LAIDLLRRPEMTYDTILEILGEAHQLPEAVAEQV 538 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I++ Y Y + + + +++K E++ IP++ DYS + +L+ E +EKL+ +KP N+ QAS Sbjct: 539 EIQTKYEGYINKSLQQVEKVKRMEQKKIPEELDYSKVDSLATEAREKLAKVKPLNIAQAS 598 Query: 597 KIEGMTPAALNLLLIYIKKNTVKL 620 +I G+ PA +++LL+Y+++ ++ Sbjct: 599 RISGVNPADISILLVYLEQGKLQR 622 >gi|54298881|ref|YP_125250.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Legionella pneumophila str. Paris] gi|81170551|sp|Q5X0Z8|MNMG_LEGPA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|53752666|emb|CAH14101.1| hypothetical protein lpp2948 [Legionella pneumophila str. Paris] Length = 624 Score = 796 bits (2057), Expect = 0.0, Method: Composition-based stats. Identities = 298/621 (47%), Positives = 407/621 (65%), Gaps = 5/621 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + + YDVIV+GGGHAG EAA AA+LG T L+TH +G MSCNPAIGG+GKGHLV+E Sbjct: 3 LEQLYDVIVVGGGHAGTEAALAAARLGVKTLLLTHNIDLLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDALDG M + AD AGIQFR+LN KGPAVR R QADR LYR A++ ++ SQ NL + Q Sbjct: 63 IDALDGAMAKAADQAGIQFRILNASKGPAVRATRAQADRVLYRKAIRTQLQSQANLTIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E +++ +V Q ++ VVLT GTFL G IH+G + GR GD PS + Sbjct: 123 QAVDDLKIEGGLVTGVVTQMGLTLKARAVVLTVGTFLGGKIHVGMNQYAGGRAGDPPSIA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IEC 240 L S D GRLKTGTP R+D +TI + + +Q D + FS++ + Q + C Sbjct: 183 LSKSLRDLDLPVGRLKTGTPPRIDRRTIDFSQMVEQPGDTPVPVFSYLGTASDHPQQVPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT T TH II N+ S +Y+G I+ GPRYCPSIEDKIVRF ++ HQIF+EPEGL Sbjct: 243 HITHTTEATHDIIRNNLDKSPMYAGVIEGVGPRYCPSIEDKIVRFADKTSHQIFVEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T+ +YPNGIST+LP E+Q QF+RTI G E +I RPGYAIEYDY +P+ L L+TK I Sbjct: 303 TTEEIYPNGISTSLPFEVQVQFVRTIKGFENAHITRPGYAIEYDYFDPRGLTSFLQTKAI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 LF AGQINGTTGYEEAAAQG++AG+N+A + + C R ++YIGV+IDDL + G Sbjct: 363 PNLFFAGQINGTTGYEEAAAQGIIAGMNAALQIKDQELWCPRRDEAYIGVLIDDLITCGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT G +LG +G+ R + F+K + ++LL + Sbjct: 423 QEPYRMFTSRAEYRLLLREDNADLRLTEKGRQLGLVGDERWESFSKKREAIESTQALLHN 482 Query: 481 LV--LTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICP-DARKFSSLVIERLQ 537 + +L ++ A EFL P+ + Q+L + + + + E+++ Sbjct: 483 SWVRVHHNDLFKEAL-LNPMQHDCRAAEFLKRPEINYQHLLMMDDLNLPELPQEITEQIE 541 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I++ YA Y RQ E ++++ E ++P+ DY+ + LS+E+ +KL+ +KP +L QA + Sbjct: 542 IQNKYAGYIDRQQQEIEKLRKHENTMLPETLDYNDVVGLSSEVIQKLNRIKPTSLAQAGR 601 Query: 598 IEGMTPAALNLLLIYIKKNTV 618 I G+TPAAL+LLL+++KK+ + Sbjct: 602 ISGVTPAALSLLLVHLKKSRL 622 >gi|319790744|ref|YP_004152384.1| glucose inhibited division protein a [Variovorax paradoxus EPS] gi|315593207|gb|ADU34273.1| glucose inhibited division protein A [Variovorax paradoxus EPS] Length = 652 Score = 796 bits (2057), Expect = 0.0, Method: Composition-based stats. Identities = 298/634 (47%), Positives = 393/634 (61%), Gaps = 14/634 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + +DVIV+GGGHAG EAA AA++GA T L++H T+G MSCNP+IGG+GKGHLV+ Sbjct: 2 LYPEEFDVIVVGGGHAGTEAALAAARMGAKTLLLSHNIETLGQMSCNPSIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DAL G M D AGIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Sbjct: 62 EVDALGGAMAIATDEAGIQFRILNSSKGPAVRATRAQADRVLYKAAIRHRLENQPNLSLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + + V Q R TVVLT GTFL G IH+G AGR GD P+ Sbjct: 122 QQAVDDLMVEGDRVVGAVTQVGIAFRARTVVLTAGTFLDGRIHVGLDNYQAGRAGDPPAI 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADE------RLIPFSFMTD-KI 233 SL + GRLKTGTP RLDG++I + K +Q D + FSFM + Sbjct: 182 SLSARLKELKLPQGRLKTGTPPRLDGRSIDFSKCTEQPGDGMPGGAGPMPVFSFMGRADM 241 Query: 234 TNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQI 293 RQ+ C IT TN TH II S +++G I GPRYCPS+EDKI RF ++ HQI Sbjct: 242 HPRQMACWITHTNARTHDIIRSGFDRSPMFTGKIDGVGPRYCPSVEDKINRFADKESHQI 301 Query: 294 FLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFP 353 FLEPEGL T+ YPNGIST+LP +IQ+Q +R++PGLE +I+RPGYAIEYDY +P+EL Sbjct: 302 FLEPEGLTTNEYYPNGISTSLPFDIQYQLVRSMPGLENAHILRPGYAIEYDYFDPRELKS 361 Query: 354 TLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMID 413 + ET+ + GLF AGQINGTTGYEEAAAQGL AGIN+A + D R ++Y+GV++D Sbjct: 362 SFETRSVKGLFFAGQINGTTGYEEAAAQGLFAGINAALQCRGEDAWLPRRDEAYLGVLVD 421 Query: 414 DLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNF 473 DL +KGV EPYRMFTSRAE+R+ LR DNAD RLT G KLG + + R F++ + Sbjct: 422 DLITKGVTEPYRMFTSRAEFRLQLREDNADMRLTEAGRKLGLVDDARWDAFSRKRDAVSR 481 Query: 474 LRSLLKSLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPD----AR 526 LKS+ + +NL S + K + L PD + + L S+ + Sbjct: 482 ETERLKSIWVNPRNLPAAESERVLGKAIEHEYNLADLLRRPDVNYETLMSLDGGKYSASS 541 Query: 527 KFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSI 586 S IE+++I + Y+ Y RQ E + E +P DFDY + ALS E+++KL Sbjct: 542 ALSETEIEQIEISAKYSGYIERQHDEVERAAHFENLRLPADFDYGQVKALSFEVRQKLDK 601 Query: 587 LKPFNLLQASKIEGMTPAALNLLLIYIKKNTVKL 620 +P L AS+I G+TPAA++LL+I+++K K Sbjct: 602 HRPETLGLASRISGVTPAAISLLMIHLRKGGHKA 635 >gi|254478035|ref|ZP_05091419.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Carboxydibrachium pacificum DSM 12653] gi|214036039|gb|EEB76729.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Carboxydibrachium pacificum DSM 12653] Length = 633 Score = 796 bits (2057), Expect = 0.0, Method: Composition-based stats. Identities = 269/623 (43%), Positives = 390/623 (62%), Gaps = 5/623 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDV V+G GHAG EAA +A+LG ST I M+CNP+IGG K LVREIDA Sbjct: 7 EYDVCVVGLGHAGSEAALASARLGLSTVGFATNLDAIALMACNPSIGGPAKAQLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D + +Q R LN KGPAVR R Q D++LY++ M+ + QENLD+ Q E+ Sbjct: 67 LGGQMAINTDKSLLQMRTLNTSKGPAVRSLRAQVDKKLYQMNMKHTLERQENLDIKQAEI 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + N ++ +V + ++ +C ++TTGTFL+G + IG++ +G G P++ L Sbjct: 127 VDILVKDNKVTGVVTKLGAIYKCKACIITTGTFLKGRVIIGEVDFESGPSGLFPASELSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + + F R KTGTP R+D ++I + K E Q DE + PFSFM DKI Q+ C +T Sbjct: 187 ALKRLGFKLMRFKTGTPPRVDKRSIDFSKMEIQPGDEVITPFSFMHDKIEIEQMPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH+II +NI + +++G I G RYCPSIEDK+V+F R HQIF+EPEG +T Sbjct: 247 TNEKTHKIIRDNIHRAPLFTGAITGVGVRYCPSIEDKVVKFPHRERHQIFIEPEGRDTYE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+S++LPE++Q +F+RT+PGLE V ++RP YAIEYD I+P +L TLE+K I GL+ Sbjct: 307 MYVQGMSSSLPEDVQLEFLRTVPGLENVRVMRPAYAIEYDCIDPTQLKATLESKWIEGLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ+NGT+GYEEAAAQGL+AGIN+A K + R+ +YIG++IDDL +KG EPY Sbjct: 367 FAGQVNGTSGYEEAAAQGLMAGINAAMKILNKPPVVLDRSQAYIGILIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSRAEYR+ LR DNAD RLT IG ++G + E R ++F + + L ++++ Sbjct: 427 RMLTSRAEYRLLLRQDNADFRLTEIGKEIGLVTEERYEKFLRKKIQLEKEMRRLSTVMVR 486 Query: 485 SKNLSSTSISFKQDGKTRT---AYEFLSYPDFSIQNLFSICPDAR-KFSSLVIERLQIES 540 + + + + Y L P+ ++ + PD V E++ I Sbjct: 487 PTEEVNNFLISRGSTPLVSGVDLYTLLKRPEVDYKSTKFLDPDRPDDILDSVAEQIDINI 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y +Q+ + ++ K E + IP+D DY + LSNE KEKLS ++P ++ QAS+I G Sbjct: 547 KYEGYILKQLRQVEQFKAMENKKIPEDIDYYQISGLSNEAKEKLSKIRPTSVGQASRISG 606 Query: 601 MTPAALNLLLIYIKK-NTVKLNE 622 ++PA +++LLIY+++ +K NE Sbjct: 607 VSPADISVLLIYLQQMKKMKSNE 629 >gi|148361201|ref|YP_001252408.1| glucose inhibited division protein A [Legionella pneumophila str. Corby] gi|296108537|ref|YP_003620238.1| glucose inhibited division protein A [Legionella pneumophila 2300/99 Alcoy] gi|166222940|sp|A5II62|MNMG_LEGPC RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|148282974|gb|ABQ57062.1| glucose inhibited division protein A [Legionella pneumophila str. Corby] gi|295650439|gb|ADG26286.1| glucose inhibited division protein A [Legionella pneumophila 2300/99 Alcoy] gi|307611762|emb|CBX01470.1| hypothetical protein LPW_31581 [Legionella pneumophila 130b] Length = 624 Score = 796 bits (2057), Expect = 0.0, Method: Composition-based stats. Identities = 298/621 (47%), Positives = 406/621 (65%), Gaps = 5/621 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + + YDVIV+GGGHAG EAA AA+LG T L+TH +G MSCNPAIGG+GKGHLV+E Sbjct: 3 LEQLYDVIVVGGGHAGTEAALAAARLGVKTLLLTHNIDLLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDALDG M + AD AGIQFR+LN KGPAVR R QADR LYR A++ ++ SQ NL + Q Sbjct: 63 IDALDGAMAKAADQAGIQFRILNASKGPAVRATRAQADRVLYRKAIRTQLQSQANLTIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E +++ +V Q ++ VVLT GTFL G IH+G + GR GD PS + Sbjct: 123 QAVDDLKIEGGLVTGVVTQMGLTLKARAVVLTVGTFLGGKIHVGMNQYAGGRAGDPPSIA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IEC 240 L S D GRLKTGTP R+D +TI + + +Q D + FS++ + Q + C Sbjct: 183 LSKSLRDLDLPVGRLKTGTPPRIDRRTIDFSQMVEQPGDTPVPVFSYLGTASDHPQQVPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT T TH II N+ S +Y+G I+ GPRYCPSIEDKIVRF ++ HQIF+EPEGL Sbjct: 243 HITHTTEATHDIIRNNLDKSPMYAGVIEGVGPRYCPSIEDKIVRFADKTSHQIFVEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T+ +YPNGIST+LP E+Q QF+RTI G E +I RPGYAIEYDY +P+ L L+TK I Sbjct: 303 TTEEIYPNGISTSLPFEVQVQFVRTIKGFENAHITRPGYAIEYDYFDPRGLTSFLQTKAI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 LF AGQINGTTGYEEAAAQG++AG+N+A + + C R ++YIGV+IDDL + G Sbjct: 363 PNLFFAGQINGTTGYEEAAAQGIIAGMNAALQIKDQELWCPRRDEAYIGVLIDDLITCGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT G +LG +G+ R F+K + ++LL + Sbjct: 423 QEPYRMFTSRAEYRLLLREDNADLRLTEKGRQLGLVGDERWDSFSKKREAIESTQALLHN 482 Query: 481 LV--LTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICP-DARKFSSLVIERLQ 537 + +L ++ A EFL P+ + Q+L + + + + E+++ Sbjct: 483 SWVRVHHNDLFKEAL-LNPMQHDCRAAEFLKRPEINYQHLLMMDDLNLPELPQEITEQIE 541 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I++ YA Y RQ E ++++ E ++P+ DY+ + LS+E+ +KL+ +KP +L QA + Sbjct: 542 IQNKYAGYIDRQQQEIEKLRKHENTMLPETLDYNDVVGLSSEVIQKLNRIKPTSLAQAGR 601 Query: 598 IEGMTPAALNLLLIYIKKNTV 618 I G+TPAAL+LLL+++KK+ + Sbjct: 602 ISGVTPAALSLLLVHLKKSRL 622 >gi|37524081|ref|NP_927425.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Photorhabdus luminescens subsp. laumondii TTO1] gi|81170566|sp|Q7NA86|MNMG_PHOLL RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|36783504|emb|CAE12344.1| Glucose inhibited division protein A [Photorhabdus luminescens subsp. laumondii TTO1] Length = 629 Score = 796 bits (2056), Expect = 0.0, Method: Composition-based stats. Identities = 284/620 (45%), Positives = 392/620 (63%), Gaps = 5/620 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EID Sbjct: 5 EQFDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL GLM + D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NL + Q Sbjct: 65 ALGGLMAKATDQAGIQFRTLNASKGPAVRATRAQADRVLYRQAVRMALENQPNLMIFQQP 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + ++ V + R VVLT GTFL G IHIG GR G P+ SL Sbjct: 125 VEDLIVENDTVTGAVTRMGLKFRAKAVVLTVGTFLDGKIHIGLENYSGGRAGGPPAISLA 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + RLKTGTP R+D +TI + + +Q D FSF+ + K +QI C I Sbjct: 185 QRLRELPLRVNRLKTGTPPRIDARTIDFSQLTQQLGDNPTPVFSFLGNVKQHPQQIPCYI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +R+ HQIFLEPEGL + Sbjct: 245 THTNEKTHDVIRNNLDRSPMYTGIIEGIGPRYCPSIEDKVMRFADRDAHQIFLEPEGLTS 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + +YPNGIST+LP ++Q Q + ++ G+E IIRPGYAIEYD+ +P++L TLE+K I G Sbjct: 305 NEIYPNGISTSLPFDVQMQIVHSMKGMENARIIRPGYAIEYDFFDPRDLKQTLESKFIHG 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AG+N+AR +++ + R +YIGV++DDL + G E Sbjct: 365 LFFAGQINGTTGYEEAAAQGLLAGLNAARYASEEESWFPRRDQAYIGVLVDDLCTLGTKE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT G +LG + + R + + + ++ R L+++ Sbjct: 425 PYRMFTSRAEYRLMLREDNADLRLTEKGRELGLVDDSRWEHYCRKLEMVEQERQRLRNIW 484 Query: 483 LTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQI 538 + + + I+ K + L P+ + + L S+ + ++++I Sbjct: 485 IHPNSNNLNDINNILKMPLSKEANGEDLLRRPEMNYKLLTSLPLFSPSLEEPQAADQVEI 544 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + Y Y RQ E ++ E +P D DY + LSNE+ KL+ KP ++ QAS+I Sbjct: 545 QVKYEGYIARQQEEIEKQLRNENTSLPVDLDYRQISGLSNEVVAKLNDHKPSSIGQASRI 604 Query: 599 EGMTPAALNLLLIYIKKNTV 618 G+TPAA+++LL+++KK + Sbjct: 605 SGVTPAAISILLVWLKKQGL 624 >gi|158321889|ref|YP_001514396.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Alkaliphilus oremlandii OhILAs] gi|205831486|sp|A8MKR8|MNMG_ALKOO RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|158142088|gb|ABW20400.1| glucose inhibited division protein A [Alkaliphilus oremlandii OhILAs] Length = 630 Score = 796 bits (2056), Expect = 0.0, Method: Composition-based stats. Identities = 265/622 (42%), Positives = 375/622 (60%), Gaps = 3/622 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDV+V+G GHAGCEAA A++G ST ++T I + CNP+IGG GKGHLVREIDA Sbjct: 8 NYDVVVVGAGHAGCEAALATARMGYSTMMLTMSLDAIAMLPCNPSIGGTGKGHLVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG D IQ R+LN KGPAV R QAD+ Y + M++ + ++ NL ++QGEV Sbjct: 68 LGGEMGLNIDKTFIQSRMLNTAKGPAVHSLRAQADKTRYHIEMKKMLENEPNLHLLQGEV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E N + +V + ++ V+L TG +L+ I +G++ +G G P+ L Sbjct: 128 VDIIVEDNTVKGVVTKTGAIYYGKAVILATGVYLKSKIFMGEVNYESGPNGLFPALYLSE 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + R KTGTPAR+ +I + K Q DE ++PFSFM + + QI C +TR Sbjct: 188 KLKALGCNMRRFKTGTPARIHKDSIDFSKVSVQIEDEEIVPFSFMNEALEKEQIPCWLTR 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETHRII EN+ SA+Y GDI+S GPRYCPSIEDKIVRF E+ HQIF+EPEG T Sbjct: 248 TTEETHRIIKENLGRSAMYRGDIESTGPRYCPSIEDKIVRFSEKPSHQIFIEPEGAETKE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G ST+LPEE+Q Q +R++ GLE I+RP YAIEYD I+P +L +LE K I+ LF Sbjct: 308 MYIQGFSTSLPEEVQVQMVRSVIGLENAIIMRPAYAIEYDCIDPTQLKASLEVKHINNLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ NG++GYEEAAAQGL+AGIN+ K D R+++YIGV+IDDL +KG EPY Sbjct: 368 SAGQFNGSSGYEEAAAQGLMAGINAVLKIRGEDPFILDRSEAYIGVLIDDLVTKGTNEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSR+EYR+ LR DNAD RLT G LG + E R +R+ + LK+ ++ Sbjct: 428 RMMTSRSEYRLVLRQDNADLRLTEKGYALGLVKEDRYERYLLKKEHIKNEMERLKTTNVS 487 Query: 485 SK--NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDAR-KFSSLVIERLQIESS 541 N + Y+ L P+ + +N+ I + ++ Sbjct: 488 PTIANPVLERAESTPIKVGMSLYDLLKRPELTYENIKEIDGTRPQDLMKDAQFQCEVMIK 547 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y +Q+ + + K E + + +D DY+ + L E ++KL+ ++P ++ QAS+I G+ Sbjct: 548 YEGYIEKQLRQIDQFKKLENKKLREDIDYNEIDGLRIEARQKLNAIRPLSVGQASRISGV 607 Query: 602 TPAALNLLLIYIKKNTVKLNEI 623 +PA +++LLIY+++ K E+ Sbjct: 608 SPADISVLLIYLEQKRRKKGEV 629 >gi|54295714|ref|YP_128129.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Legionella pneumophila str. Lens] gi|81170553|sp|Q5WSS4|MNMG_LEGPL RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|53755546|emb|CAH17045.1| hypothetical protein lpl2802 [Legionella pneumophila str. Lens] Length = 624 Score = 796 bits (2056), Expect = 0.0, Method: Composition-based stats. Identities = 298/621 (47%), Positives = 406/621 (65%), Gaps = 5/621 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + + YDVIV+GGGHAG EAA AA+LG T L+TH +G MSCNPAIGG+GKGHLV+E Sbjct: 3 LEQLYDVIVVGGGHAGTEAALAAARLGVKTLLLTHNIDLLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDALDG M + AD AGIQFR+LN KGPAVR R QADR LYR A++ ++ SQ NL + Q Sbjct: 63 IDALDGAMAKAADQAGIQFRILNASKGPAVRATRAQADRVLYRKAIRTQLQSQANLTIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E +++ +V Q ++ VVLT GTFL G IH+G + GR GD PS + Sbjct: 123 QAVDDLKIEGGLVTGVVTQMGLTLKARAVVLTVGTFLGGKIHVGMNQYAGGRAGDPPSIA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IEC 240 L S D GRLKTGTP R+D +TI + + +Q D + FS++ + Q + C Sbjct: 183 LSKSLRDLDLPVGRLKTGTPPRIDRRTIDFSQMVEQPGDTPVPVFSYLGTASDHPQQVSC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT T TH II N+ S +Y+G I+ GPRYCPSIEDKIVRF ++ HQIF+EPEGL Sbjct: 243 HITHTTEATHDIIRNNLDKSPMYAGVIEGVGPRYCPSIEDKIVRFADKTSHQIFVEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T+ +YPNGIST+LP E+Q QF+RTI G E +I RPGYAIEYDY +P+ L L+TK I Sbjct: 303 TTEEIYPNGISTSLPFEVQVQFVRTIKGFENAHITRPGYAIEYDYFDPRGLTSFLQTKAI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 LF AGQINGTTGYEEAAAQG++AG+N+A + D C R ++YIGV+IDDL + G Sbjct: 363 PNLFFAGQINGTTGYEEAAAQGIIAGMNAALQIKGQDLWCPRRDEAYIGVLIDDLITCGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT G +LG +G+ R F+K + ++LL + Sbjct: 423 QEPYRMFTSRAEYRLLLREDNADLRLTEKGRQLGLVGDERWDSFSKKREAIESTQALLHN 482 Query: 481 LV--LTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICP-DARKFSSLVIERLQ 537 + +L ++ A EFL P+ + ++L + + + + E+++ Sbjct: 483 SWVRVHHNDLFKEAL-LNPMQHDCRAAEFLKRPEINYRHLLMMDDLNLPELPQEITEQIE 541 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I++ YA Y RQ E ++++ E ++P+ DY+ + LS+E+ +KL+ +KP +L QA + Sbjct: 542 IQNKYAGYIDRQQQEIEKLRKHENTMLPETLDYNDVVGLSSEVIQKLNRIKPTSLAQAGR 601 Query: 598 IEGMTPAALNLLLIYIKKNTV 618 I G+TPAAL+LLL+++KK+ + Sbjct: 602 ISGVTPAALSLLLVHLKKSRL 622 >gi|329732221|gb|EGG68571.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus 21193] Length = 625 Score = 796 bits (2056), Expect = 0.0, Method: Composition-based stats. Identities = 283/624 (45%), Positives = 395/624 (63%), Gaps = 7/624 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + + YDVIVIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VRE Sbjct: 1 MVQEYDVIVIGAGHAGVEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R I +ENL ++Q Sbjct: 61 IDALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEENLHIMQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G V E + + + + V++TTGTFLRG I +G +K +G PS + Sbjct: 121 GMVDELIIENDEVKGVRTNIGTEYHSKAVIITTGTFLRGEIILGNMKYSSGPNHQLPSIT 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L ++ + FD R KTGTP R++ KTI + KTE Q D+ FSF T + Q+ C Sbjct: 181 LSDNLRELGFDIVRFKTGTPPRVNSKTIDYSKTEIQPGDDVGRAFSFETTEYILDQLPCW 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN ETH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG N Sbjct: 241 LTYTNAETHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRN 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETK I Sbjct: 301 TNEVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKMIK 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 L+ AGQINGT+GYEEAA QGL+AGIN+A K SR+D+YIGV+IDDL +KG Sbjct: 361 NLYTAGQINGTSGYEEAAGQGLMAGINAAGKVLNTGEKILSRSDAYIGVLIDDLVTKGTN 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAEYR+ LR DNAD RLT +G +LG I E R RF + Q+ + L + Sbjct: 421 EPYRLLTSRAEYRLLLRHDNADLRLTDMGYELGMISEERYARFNEKRQQIDAEIKRLSDI 480 Query: 482 VLTSKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 + + S +DG A + L P+ + + I + + ++ V E++ Sbjct: 481 RIKPNEHTQAIIEQHGGSRLKDGI--LAIDLLRRPEMTYDIILEILEEEHQLNADVEEQV 538 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I++ Y Y + + + +++K E++ IP+D DYS + +L+ E +EKLS +KP N+ QAS Sbjct: 539 EIQTKYEGYINKSLQQVEKVKRMEEKKIPEDLDYSKIDSLATEAREKLSEVKPLNIAQAS 598 Query: 597 KIEGMTPAALNLLLIYIKKNTVKL 620 +I G+ PA +++LLIY+++ ++ Sbjct: 599 RISGVNPADISILLIYLEQGKLQR 622 >gi|167462791|ref|ZP_02327880.1| glucose inhibited division protein A [Paenibacillus larvae subsp. larvae BRL-230010] gi|322381367|ref|ZP_08055370.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321154943|gb|EFX47214.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 631 Score = 796 bits (2055), Expect = 0.0, Method: Composition-based stats. Identities = 267/615 (43%), Positives = 376/615 (61%), Gaps = 4/615 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDVIVIG GHAGCE+A AA++G ST L+T + M CNP+IGG KGH+VREIDA Sbjct: 7 EYDVIVIGAGHAGCESALAAARMGCSTLLLTINLDMVAFMPCNPSIGGPAKGHVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAV R QAD+ LY+ M+ I Q NL + QG V Sbjct: 67 LGGEMGRNIDKTYIQMRMLNTGKGPAVHALRAQADKFLYQQTMKETIEKQPNLTMRQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ + + +VLTTGT+LRG + +G+L +G PS L Sbjct: 127 EELIVEAGVCKGVITKSGAEYYGKAIVLTTGTYLRGKVIMGELMYESGPNNQQPSIKLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT-DKITNRQIECGIT 243 S F+ R KTGTP R+ ++I + KTE Q D FS+ T + + Q+ C +T Sbjct: 187 SLRNLGFELVRFKTGTPPRVHKESIDFSKTEIQPGDAEPEFFSYETREPVKEEQLPCWLT 246 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 T+ ET +I EN+ + ++SG I+ GPRYCPSIEDKIVRF ++ HQIFLEPEG T Sbjct: 247 YTSAETQELITENLHRAPMFSGVIEGTGPRYCPSIEDKIVRFADKPKHQIFLEPEGRYTS 306 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 Y G+ST++PE++Q +RTIPGLE V ++R GYAIEYD + P +L PTLETK + GL Sbjct: 307 EYYVQGLSTSMPEDVQLSMLRTIPGLECVEMMRTGYAIEYDAVIPTQLKPTLETKLVEGL 366 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGT+GYEEAA QG++AGIN+ARK + I R++ YIGV+IDDL +KG EP Sbjct: 367 FTAGQINGTSGYEEAAGQGIMAGINAARKVQGKEPIILDRSEGYIGVLIDDLVTKGTNEP 426 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLTPIG ++G I E R + F + L++ + Sbjct: 427 YRLLTSRAEYRLLLRHDNADLRLTPIGYEIGLITEERYQAFLNKKGKVEQEIERLRTTKV 486 Query: 484 TSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + ++ Q L P ++ + P + + E+++I+ Sbjct: 487 RPEAFIQDLLAEAGTVQLNNAVDLLSLLRRPQIMYSHIEQMSPSPLELDGEMKEQVEIQI 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y+ Y+ +Q+ + + +K EK+LIP D Y + ++ E K+KL+ ++P ++ QAS+I G Sbjct: 547 KYSGYSEKQLAQVERLKKMEKKLIPDDIVYEEIHGIATEAKQKLAKIRPISIGQASRISG 606 Query: 601 MTPAALNLLLIYIKK 615 ++PA +++LL+Y++ Sbjct: 607 VSPADISILLVYLEH 621 >gi|71279490|ref|YP_271685.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Colwellia psychrerythraea 34H] gi|81170535|sp|Q47U38|MNMG_COLP3 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|71145230|gb|AAZ25703.1| glucose inhibited division protein A [Colwellia psychrerythraea 34H] Length = 629 Score = 796 bits (2055), Expect = 0.0, Method: Composition-based stats. Identities = 287/622 (46%), Positives = 384/622 (61%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 SYDVIV+GGGHAG EA+ AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 YQESYDVIVVGGGHAGTEASLAAARMGCKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL GLM D + IQFR LN KGPAVR R QADR LYR ++ + +QENL + Q Sbjct: 63 IDALGGLMATAIDHSAIQFRTLNSSKGPAVRATRAQADRILYRNYVRNTLENQENLTIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 E + + + Q + +VVLT GTFL G+IHIG GR GD S + Sbjct: 123 QPCDDLILENDRVVGVSTQMGLKFKGKSVVLTVGTFLSGLIHIGLNNYQGGRAGDPASVN 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIEC 240 L F RLKTGTP RLD +++ + E+Q D FSFM + + QI C Sbjct: 183 LAAKMRDMPFRMDRLKTGTPPRLDARSLDFSVMEEQAGDTPSPVFSFMGSQADHPEQISC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH+ I + + S +Y+G I+ GPRYCPSIEDKI RF +++ HQIF+EPEGL Sbjct: 243 FITHTNEQTHQHIRDGLDRSPMYTGVIEGVGPRYCPSIEDKITRFADKSSHQIFVEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T VYPNGIST+LP ++Q +R+I G E I RPGYAIEYDY +P++L +LE+K + Sbjct: 303 TTHEVYPNGISTSLPFDVQMNLVRSIKGFENAFITRPGYAIEYDYFDPRDLKQSLESKFV 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 L+ AGQINGTTGYEEA AQGL+AG N+A + + D R +Y+GV+IDDL + G Sbjct: 363 QNLYFAGQINGTTGYEEAGAQGLIAGANAANRVKERDEFTLGRDQAYMGVLIDDLATLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT G K+G +G+ R +RF + ++ R L+S Sbjct: 423 KEPYRMFTSRAEYRLLLREDNADIRLTEQGRKIGLVGDTRWQRFNEKMENVELERQRLRS 482 Query: 481 LVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 + + I+ K + + + P+ + +L I S E++ Sbjct: 483 TWVQKDHTKIDQINALLKTPMSKEASLEDLIRRPEVNYTDLMKIEGLGPAIEDSQASEQI 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I++ YA Y RQ+ E + K E IP+DFDY + LSNE+ KL P + +AS Sbjct: 543 EIQTKYAGYIDRQLDEIAKKKRNEDTKIPRDFDYQQISGLSNEVVAKLKDACPETIGKAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA++LLL+Y+KK+ + Sbjct: 603 RISGITPAAISLLLVYLKKHGL 624 >gi|187476515|ref|YP_784539.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Bordetella avium 197N] gi|123515352|sp|Q2L2T3|MNMG_BORA1 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|115421101|emb|CAJ47585.1| glucose inhibited division protein A [Bordetella avium 197N] Length = 637 Score = 796 bits (2055), Expect = 0.0, Method: Composition-based stats. Identities = 300/625 (48%), Positives = 400/625 (64%), Gaps = 13/625 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 +DVIV+GGGHAG EAA AA+ GA T L+TH T+G MSCNP+IGG+GKGHLV+E+D Sbjct: 5 HEFDVIVVGGGHAGTEAALAAARSGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D AGIQFR+LN KGPAVR R QADR LYR A++ + +QENL + Q Sbjct: 65 ALGGAMAIATDEAGIQFRILNSSKGPAVRATRAQADRVLYRKAIRHRLENQENLWLFQQS 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + + V Q R VVLT GTFL G+IH+G GR GD P+NSL Sbjct: 125 VEDLIVEGDKVVGAVTQIGLKFRGRAVVLTAGTFLNGLIHVGLQHYSGGRAGDPPANSLG 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDK-ITNRQIECG 241 + GRLKTGTP R+DG+TI + E+Q D IP FSFM + RQ+ C Sbjct: 185 QRLKELKLPQGRLKTGTPPRIDGRTINYSVLEEQPGDLDPIPVFSFMGSAALHPRQLPCW 244 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT TN TH II + S +YSG I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL+ Sbjct: 245 ITHTNERTHDIIRGGLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKPSHQIFLEPEGLD 304 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T VYPNG+ST+LP ++Q++ I ++PGLE +I+RPGYAIEYDY +P+ L +LETK IS Sbjct: 305 THEVYPNGVSTSLPFDVQYELIHSLPGLEHAHILRPGYAIEYDYFDPRGLKSSLETKAIS 364 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQINGTTGYEEAAAQGL+AGIN+AR ++ + R ++Y+GV++DDL ++GV Sbjct: 365 GLFFAGQINGTTGYEEAAAQGLLAGINAARYASDREAWVPRRDEAYLGVLVDDLVTRGVT 424 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F + L+S Sbjct: 425 EPYRMFTSRAEYRLSLREDNADLRLTEIGRELGLVDDIRWDVFNRKRDAIQAEVQRLQST 484 Query: 482 VLTSK---NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF--------SS 530 + + + ++ K + + L P+ S + L A + Sbjct: 485 WVNPRLLPEEPAQALLGKAIEREYALADLLKRPNISYEALMQARNGAGELLAGPGLLGDD 544 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 ++ E+++I+ YA Y RQ E ++ E++ IP D DY ++ +LS E+++KL +P Sbjct: 545 VLAEQVEIQIKYAGYIERQRDEVQKHVVHEQQAIPADIDYDAVSSLSFEVRQKLKTHRPE 604 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 + QA++I G+TPAA++LLLI++K+ Sbjct: 605 TVGQAARISGVTPAAVSLLLIHLKR 629 >gi|239993739|ref|ZP_04714263.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Alteromonas macleodii ATCC 27126] Length = 633 Score = 796 bits (2055), Expect = 0.0, Method: Composition-based stats. Identities = 289/620 (46%), Positives = 392/620 (63%), Gaps = 5/620 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++DVIV+GGGHAG EAA AA++GA+T L+TH TIG MSCNPAIGG+GKGHLV+EID Sbjct: 5 EAFDVIVVGGGHAGTEAALAAARMGANTLLLTHNIETIGQMSCNPAIGGIGKGHLVKEID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D GIQFR LN KGPAVR R QADR LY+ A++ + +QENL + Q Sbjct: 65 ALGGAMALAIDKGGIQFRTLNSSKGPAVRATRAQADRTLYKNAIRDIVENQENLTLFQQS 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + + +V Q + +VVLT GTFL G IHIG GR GD PS +L Sbjct: 125 VDDLIVENDQVCGVVTQMGLKFKAKSVVLTVGTFLGGTIHIGLENYRGGRAGDPPSIALA 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGI 242 + F RLKTGTPARLD +++ + + Q D FSFM D+ + QI C I Sbjct: 185 DRLRALPFRVDRLKTGTPARLDARSLDFSVMQPQPGDNPTPVFSFMGDRTMHPTQIPCYI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II + S +++G I+ GPRYCPSIEDKI RF ++ HQIF+EPEGLN+ Sbjct: 245 THTNEKTHDIIRGGLDRSPMFTGVIEGIGPRYCPSIEDKITRFADKTSHQIFVEPEGLNS 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 VYPNGIST+LP ++Q +R+I G E +I+RPGYAIEYD+ +P++L TLETK I G Sbjct: 305 IEVYPNGISTSLPFDVQMNLVRSIKGFENAHIVRPGYAIEYDFFDPRDLKQTLETKFIRG 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEA AQGLVAG N+A + + D + R +Y+GV+IDDL + G E Sbjct: 365 LFFAGQINGTTGYEEAGAQGLVAGANAALQVQEKDPMILRRDQAYMGVLIDDLATMGTKE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD+RLT +G ++G + + R +F ++ L+ Sbjct: 425 PYRMFTSRAEYRLLLREDNADSRLTAMGREIGLVDDARWAKFNDKMEAVESELQRLRGQW 484 Query: 483 LTSKNLSSTSISF---KQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQI 538 + + ++ ++ + + E + P+ + L I + E+++I Sbjct: 485 IHPDHAATPELNTMLKNPVSREHSLEELIRRPEMTYGQLMEIESVGPGLEDPVAAEQVEI 544 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + YA Y RQM E + + E L+P D D+S + LSNE+ KL+ +P + +AS+I Sbjct: 545 QIKYAGYIARQMDEIAKTQRHENTLLPVDMDFSKISGLSNEVVAKLTEARPETIGKASRI 604 Query: 599 EGMTPAALNLLLIYIKKNTV 618 G+TPAA++LLL+Y+KK+ + Sbjct: 605 SGITPAAISLLLVYLKKHGM 624 >gi|330815034|ref|YP_004358739.1| Glucose inhibited division protein A [Burkholderia gladioli BSR3] gi|327367427|gb|AEA58783.1| Glucose inhibited division protein A [Burkholderia gladioli BSR3] Length = 656 Score = 796 bits (2055), Expect = 0.0, Method: Composition-based stats. Identities = 288/627 (45%), Positives = 389/627 (62%), Gaps = 15/627 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNP+IGG+GKGHLV+E+DA Sbjct: 6 EFDVIVVGGGHAGTEAALAAARMGVKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D AGIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 66 LGGAMAIATDEAGIQFRILNSSKGPAVRATRAQADRLLYKQAIRSRLENQPNLWLFQQAV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + V Q R VVLT GTFL G IH+G GR GD + SL + Sbjct: 126 DDLIVEGERVVGAVTQIGIRFRARAVVLTAGTFLDGKIHVGLNNHTGGRAGDPAAVSLSS 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTD-KITNRQIECGI 242 + GRLKTGTP R+DG++I + K E+Q D +P FSF+ ++ RQ+ C + Sbjct: 186 RLKELKLPQGRLKTGTPPRIDGRSIDFSKLEEQPGDLDPVPVFSFLGRVEMHPRQMPCWV 245 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T Sbjct: 246 THTNERTHDIIRSGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLTT 305 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + YPNGIST+LP ++Q + ++ GLE +I+RPGYAIEYDY +P+ L +LETK I G Sbjct: 306 NEFYPNGISTSLPFDVQLDLVHSMRGLEHAHILRPGYAIEYDYFDPRGLKASLETKAIEG 365 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AGIN+ R + + D C R ++Y+GV++DDL ++GV E Sbjct: 366 LFFAGQINGTTGYEEAAAQGLLAGINAGRYAQEKDAWCPRRDEAYLGVLVDDLVTRGVSE 425 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F++ + L+S Sbjct: 426 PYRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDDARWDAFSRKRDAVSRETERLRSTW 485 Query: 483 LTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNL----------FSICPDARKFS 529 +T K L +T++ K + E L P S + + Sbjct: 486 VTPKTLPAEEATALLGKAIDHEYSLAELLRRPGVSYAGVCGLRGGECGPAEPLAEDPVLL 545 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 + + E+++I Y Y RQ E + E +P+ DY+ + LS E ++KL+ +P Sbjct: 546 AQIEEQIEIGIKYQGYIERQAGEIERNGAHENTRLPEGIDYAEVRGLSFEARQKLNQHRP 605 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKKN 616 + QAS+I G+TPAA++LL++++K+ Sbjct: 606 ETIGQASRISGITPAAISLLMVHLKRG 632 >gi|222152197|ref|YP_002561357.1| glucose-inhibited division protein A [Macrococcus caseolyticus JCSC5402] gi|259495848|sp|B9E8Z3|MNMG_MACCJ RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|222121326|dbj|BAH18661.1| glucose-inhibited division protein A [Macrococcus caseolyticus JCSC5402] Length = 624 Score = 795 bits (2054), Expect = 0.0, Method: Composition-based stats. Identities = 277/624 (44%), Positives = 387/624 (62%), Gaps = 7/624 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + + YDVIV+G GHAG EA +A+ GA T ++T ++ M CNP++GG KG +VRE Sbjct: 1 MEQKYDVIVVGAGHAGVEAGLASARKGAKTLMLTINLDSVAFMPCNPSVGGPAKGIVVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+ I +Q+NLD++Q Sbjct: 61 IDALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKSVIEAQDNLDIMQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G V E + + + VVLTTGTFLRG I +G +K +G PS Sbjct: 121 GMVERLIIEDGKVLGVETVIGTTYLADAVVLTTGTFLRGEIILGNIKYSSGPNHQMPSIK 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L + + FD R KTGTP R++ +I + KTE Q D+ FS+ T + Q+ C Sbjct: 181 LADHLREIGFDIVRFKTGTPPRVNSDSIDYSKTEIQPGDDLPRAFSYETTEFIMDQLPCW 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN ETH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQIFLEPEG N Sbjct: 241 LTYTNGETHQVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQIFLEPEGRN 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T VY G+ST+LPE +Q Q ++TIPGLEK +++R GYAIEYD I P +L+PTLETKKI Sbjct: 301 TKEVYVQGLSTSLPEHVQLQMLKTIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKKIQ 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GL+ AGQINGT+GYEEAA QGL+AGIN+A K D + R ++YIGV+IDDL +KG Sbjct: 361 GLYTAGQINGTSGYEEAAGQGLMAGINAAAKVLGHDELILGRHEAYIGVLIDDLVTKGTN 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAE+R+ LR DNAD RLT IG G I E R RF + + L + Sbjct: 421 EPYRLLTSRAEHRLLLRHDNADLRLTEIGYNAGLIDEFRYSRFNNKKAAISEEINRLSQI 480 Query: 482 VLTSKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 + + S + +DG A + L P+ ++ ++ + V E++ Sbjct: 481 RIKPNEKTQSMIESRGGTPLKDGI--LAIDLLRRPEMDYASVVALIEEQGMIDESVQEQV 538 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I++ Y Y + + + +++K E + IP++ DY + +L+ E +EKL +KP ++ QAS Sbjct: 539 EIQTKYEGYIQKSLQQVEKVKRMENKKIPENIDYDDIHSLATEAREKLKEVKPLSIAQAS 598 Query: 597 KIEGMTPAALNLLLIYIKKNTVKL 620 +I G+ PA +++LLIYI++ +K Sbjct: 599 RISGVNPADISILLIYIEQGKIKR 622 >gi|257424193|ref|ZP_05600622.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus 55/2053] gi|257426870|ref|ZP_05603272.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus 65-1322] gi|257429506|ref|ZP_05605893.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Staphylococcus aureus subsp. aureus 68-397] gi|257432153|ref|ZP_05608516.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Staphylococcus aureus subsp. aureus E1410] gi|257435114|ref|ZP_05611165.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus M876] gi|282912911|ref|ZP_06320703.1| glucose inhibited division protein A [Staphylococcus aureus subsp. aureus M899] gi|282922539|ref|ZP_06330229.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus C101] gi|293497964|ref|ZP_06665818.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus 58-424] gi|293511554|ref|ZP_06670248.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus M809] gi|293550163|ref|ZP_06672835.1| glucose inhibited division protein A [Staphylococcus aureus subsp. aureus M1015] gi|257273211|gb|EEV05313.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus 55/2053] gi|257276501|gb|EEV07952.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus 65-1322] gi|257279987|gb|EEV10574.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Staphylococcus aureus subsp. aureus 68-397] gi|257283032|gb|EEV13164.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Staphylococcus aureus subsp. aureus E1410] gi|257285710|gb|EEV15826.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus M876] gi|282314760|gb|EFB45146.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus C101] gi|282323011|gb|EFB53330.1| glucose inhibited division protein A [Staphylococcus aureus subsp. aureus M899] gi|290919210|gb|EFD96286.1| glucose inhibited division protein A [Staphylococcus aureus subsp. aureus M1015] gi|291096895|gb|EFE27153.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus 58-424] gi|291465512|gb|EFF08044.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus M809] Length = 625 Score = 795 bits (2054), Expect = 0.0, Method: Composition-based stats. Identities = 284/624 (45%), Positives = 395/624 (63%), Gaps = 7/624 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + + YDVIVIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VRE Sbjct: 1 MVQEYDVIVIGAGHAGVEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R I +ENL ++Q Sbjct: 61 IDALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEENLHIMQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G V E N + + + V++TTGTFLRG I +G +K +G PS + Sbjct: 121 GMVDELIIEDNEVKGVRTNIGTEYLSKAVIITTGTFLRGEIILGNMKYSSGPNHQLPSIT 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L ++ + FD R KTGTP R++ KTI + KTE Q D+ FSF T + Q+ C Sbjct: 181 LSDNLRELGFDIVRFKTGTPPRVNSKTIDYSKTEIQPGDDVGRAFSFETTEYILDQLPCW 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN ETH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG N Sbjct: 241 LTYTNAETHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRN 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETK I Sbjct: 301 TNEVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKMIK 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 L+ AGQINGT+GYEEAA QGL+AGIN+A K SR+D+YIGV+IDDL +KG Sbjct: 361 NLYTAGQINGTSGYEEAAGQGLMAGINAAGKVLNTGEKILSRSDAYIGVLIDDLVTKGTN 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAEYR+ LR DNAD RLT +G +LG I E R RF + Q+ + L + Sbjct: 421 EPYRLLTSRAEYRLLLRHDNADLRLTDMGYELGMISEERYARFNEKRQQIDAEIKRLSDI 480 Query: 482 VLTSKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 + + S +DG A + L P+ + + I + + ++ V E++ Sbjct: 481 RIKPNEHTQVIIEQHGGSRLKDGI--LAIDLLRRPEMTYDIILEILEEEHQLNADVEEQV 538 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I++ Y Y + + + +++K E++ IP+D DYS + +L+ E +EKLS +KP N+ QAS Sbjct: 539 EIQTKYEGYINKSLQQVEKVKRMEEKKIPEDLDYSKIDSLATEAREKLSEVKPLNIAQAS 598 Query: 597 KIEGMTPAALNLLLIYIKKNTVKL 620 +I G+ PA +++LLIY+++ ++ Sbjct: 599 RISGVNPADISILLIYLEQGKLQR 622 >gi|295429294|ref|ZP_06821916.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus EMRSA16] gi|295127053|gb|EFG56697.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus EMRSA16] Length = 625 Score = 795 bits (2054), Expect = 0.0, Method: Composition-based stats. Identities = 284/624 (45%), Positives = 395/624 (63%), Gaps = 7/624 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + + YDVIVIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VRE Sbjct: 1 MVQEYDVIVIGAGHAGVEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R I +ENL ++Q Sbjct: 61 IDALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEENLHIMQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G V E N + + + V++TTGTFLRG I +G +K +G PS + Sbjct: 121 GMVDELIIEDNEVKGVRTNIGTEYLSKAVIITTGTFLRGEIILGNMKYSSGPNHQLPSIT 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L ++ + FD R KTGTP R++ KTI + KTE Q D+ FSF T + Q+ C Sbjct: 181 LSDNLRELGFDIVRFKTGTPPRVNSKTIDYSKTEIQPGDDVDRAFSFETTEYILDQLPCW 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN ETH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG N Sbjct: 241 LTYTNAETHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRN 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETK I Sbjct: 301 TNEVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKMIK 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 L+ AGQINGT+GYEEAA QGL+AGIN+A K SR+D+YIGV+IDDL +KG Sbjct: 361 NLYTAGQINGTSGYEEAAGQGLMAGINAAGKVLNTGEKILSRSDAYIGVLIDDLVTKGTN 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAEYR+ LR DNAD RLT +G +LG I E R RF + Q+ + L + Sbjct: 421 EPYRLLTSRAEYRLLLRHDNADLRLTDMGYELGMISEERYARFNEKRQQIDAEIKRLSDI 480 Query: 482 VLTSKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 + + S +DG A + L P+ + + I + + ++ V E++ Sbjct: 481 RIKPNEHTQAIIEQHGGSRLKDGI--LAIDLLRRPEMTYDIILEILEEEHQLNADVEEQV 538 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I++ Y Y + + + +++K E++ IP+D DYS + +L+ E +EKLS +KP N+ QAS Sbjct: 539 EIQTKYEGYINKSLQQVEKVKRMEEKKIPEDLDYSKIDSLATEAREKLSEVKPLNIAQAS 598 Query: 597 KIEGMTPAALNLLLIYIKKNTVKL 620 +I G+ PA +++LLIY+++ ++ Sbjct: 599 RISGVNPADISILLIYLEQGKLQR 622 >gi|52843084|ref|YP_096883.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|81170552|sp|Q5ZRJ2|MNMG_LEGPH RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|52630195|gb|AAU28936.1| glucose inhibited division protein A [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 624 Score = 795 bits (2054), Expect = 0.0, Method: Composition-based stats. Identities = 302/620 (48%), Positives = 404/620 (65%), Gaps = 3/620 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + + YDVIV+GGGHAG EAA AA+LG T L+TH +G MSCNPAIGG+GKGHLV+E Sbjct: 3 LEQLYDVIVVGGGHAGTEAALAAARLGVKTLLLTHNIDLLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDALDG M + AD AGIQFR+LN KGPAVR R QADR LYR A++ ++ SQ NL + Q Sbjct: 63 IDALDGAMAKAADQAGIQFRILNASKGPAVRATRAQADRVLYRKAIRTQLQSQANLTIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E +++ +V Q ++ VVLT GTFL G IH+G + GR GD PS + Sbjct: 123 QAVDDLKIEGGLVTGVVTQMGLTLKARAVVLTVGTFLGGKIHVGMNQYAGGRAGDPPSIA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IEC 240 L S D GRLKTGTP R+D +TI + + +Q D + FS++ + Q + C Sbjct: 183 LSKSLRDLDLPVGRLKTGTPPRIDRRTIDFSQMVEQPGDTPVPVFSYLGAASDHPQQVPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT T TH II N+ S +Y+G I+ GPRYCPSIEDKIVRF ++ HQIF+EPEGL Sbjct: 243 HITHTTEATHDIIRNNLDKSPMYAGVIEGVGPRYCPSIEDKIVRFADKTSHQIFVEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T+ +YPNGIST+LP E+Q QF+RTI G E +I RPGYAIEYDY +P+ L L+TK I Sbjct: 303 TTEEIYPNGISTSLPFEVQVQFVRTIKGFENAHITRPGYAIEYDYFDPRGLTSFLQTKAI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 LF AGQINGTTGYEEAAAQG++AG+N+A + + C R ++YIGV+IDDL + G Sbjct: 363 PNLFFAGQINGTTGYEEAAAQGIIAGMNAALQIKDQELWCPRRDEAYIGVLIDDLITCGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL-K 479 EPYRMFTSRAEYR+ LR DNAD RLT G +LG +G+ R F+K + ++LL Sbjct: 423 QEPYRMFTSRAEYRLLLREDNADLRLTEKGRQLGLVGDERWDSFSKKREAIESTQALLYN 482 Query: 480 SLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICP-DARKFSSLVIERLQI 538 S V N F A EFL P+ + Q+L + + + + E+++I Sbjct: 483 SWVRVHHNDLFKETLFNPMQHDCRAVEFLKRPEINYQHLLMMDDLNLPELPQEITEQIEI 542 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 ++ YA Y RQ E ++++ E L+P+ DY+ + LS+E+ +KL+ +KP +L QA +I Sbjct: 543 QNKYAGYIDRQQQEIEKLRKHENTLLPETLDYNDVVGLSSEVIQKLNRIKPTSLAQAGRI 602 Query: 599 EGMTPAALNLLLIYIKKNTV 618 G+TPAAL+LLL+++KK+ + Sbjct: 603 SGVTPAALSLLLVHLKKSRL 622 >gi|314934964|ref|ZP_07842323.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus caprae C87] gi|313652894|gb|EFS16657.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus caprae C87] Length = 625 Score = 795 bits (2054), Expect = 0.0, Method: Composition-based stats. Identities = 283/624 (45%), Positives = 398/624 (63%), Gaps = 7/624 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + + YDVIVIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VRE Sbjct: 1 MVQEYDVIVIGAGHAGIEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R I ++NLD++Q Sbjct: 61 IDALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEDNLDIMQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G V E+N + + + R VV+TTGTFLRG I +G +K +G PS + Sbjct: 121 GMVDELIIEENEVKGVRTNIGTEYRSKAVVVTTGTFLRGEIILGNMKYSSGPNHQLPSIT 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L ++ + FD R KTGTP R++ KTI + KTE Q D+ FS+ T + Q+ C Sbjct: 181 LADNLRQLGFDVVRFKTGTPPRVNAKTIDYSKTEIQPGDDVGRAFSYETTEYILDQLPCW 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN ETH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG N Sbjct: 241 LTYTNGETHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRN 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETK I Sbjct: 301 TNEVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKSIK 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 L+ AGQINGT+GYEEAA QG++AGIN+A K SR+D+YIGV+IDDL +KG Sbjct: 361 NLYTAGQINGTSGYEEAAGQGIMAGINAAGKVLGTGEKILSRSDAYIGVLIDDLVTKGTN 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAEYR+ LR DNAD RLT +G +LG I E R RF + Q+ L + Sbjct: 421 EPYRLLTSRAEYRLLLRHDNADLRLTDVGYELGMISEERYARFNEKRQQIQNEIQRLTDI 480 Query: 482 VLTSKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 + + + S S +DG A + L P+ + + I + + V E++ Sbjct: 481 RIKPNDHTQSVIESKGGSRLKDGI--LAIDLLRRPEMTYDTILEILEEDHQLPDAVEEQV 538 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I++ Y Y + + + +++K E++ IP+D DYS + +L++E +EKL+ +KP N+ QAS Sbjct: 539 EIQTKYEGYINKSLQQVEKVKRMEEKKIPEDLDYSKVDSLASEAREKLAEVKPLNIAQAS 598 Query: 597 KIEGMTPAALNLLLIYIKKNTVKL 620 +I G+ PA +++LL+Y+++ ++ Sbjct: 599 RISGVNPADISILLVYLEQGKLQR 622 >gi|223043387|ref|ZP_03613433.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus capitis SK14] gi|222443176|gb|EEE49275.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus capitis SK14] Length = 625 Score = 795 bits (2054), Expect = 0.0, Method: Composition-based stats. Identities = 282/624 (45%), Positives = 396/624 (63%), Gaps = 7/624 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + + YDVIVIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VRE Sbjct: 1 MVQEYDVIVIGAGHAGIEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R I ++NLD++Q Sbjct: 61 IDALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEDNLDIMQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G V E N + + + VV+TTGTFLRG I +G +K +G PS + Sbjct: 121 GMVDELIIEDNEVKGVRTNIGTEYLSKAVVVTTGTFLRGEIILGNMKYSSGPNHQLPSIT 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L ++ + FD R KTGTP R++ KTI + KTE Q D+ FS+ T + Q+ C Sbjct: 181 LADNLRQLGFDVVRFKTGTPPRVNAKTIDYSKTEIQPGDDVGRAFSYETTEYILDQLPCW 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN ETH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG N Sbjct: 241 LTYTNGETHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRN 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETK I Sbjct: 301 TNEVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKSIK 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 L+ AGQINGT+GYEEAA QG++AGIN+A K SR+D+YIGV+IDDL +KG Sbjct: 361 NLYTAGQINGTSGYEEAAGQGIMAGINAAGKVLGTGEKILSRSDAYIGVLIDDLVTKGTN 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAEYR+ LR DNAD RLT +G +LG I E R RF + Q+ L + Sbjct: 421 EPYRLLTSRAEYRLLLRHDNADLRLTDVGYELGMISEERYARFNEKRQQIQNEIQRLTDI 480 Query: 482 VLTSKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 + + + S S +DG A + L P+ + + I + + V E++ Sbjct: 481 RIKPNDHTQSVIESKGGSRLKDGI--LAIDLLRRPEMTYDTILEILEEDHQLPDAVEEQV 538 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I++ Y Y + + + +++K E++ IP+D DYS + +L++E +EKL+ +KP N+ QAS Sbjct: 539 EIQTKYEGYINKSLQQVEKVKRMEEKKIPEDLDYSKVDSLASEAREKLAEVKPLNIAQAS 598 Query: 597 KIEGMTPAALNLLLIYIKKNTVKL 620 +I G+ PA +++LL+Y+++ ++ Sbjct: 599 RISGVNPADISILLVYLEQGKLQR 622 >gi|291615447|ref|YP_003525604.1| glucose inhibited division protein A [Sideroxydans lithotrophicus ES-1] gi|291585559|gb|ADE13217.1| glucose inhibited division protein A [Sideroxydans lithotrophicus ES-1] Length = 628 Score = 795 bits (2053), Expect = 0.0, Method: Composition-based stats. Identities = 293/626 (46%), Positives = 407/626 (65%), Gaps = 5/626 (0%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 + +DVIVIGGGHAG EAA +A+ G +T L+TH T+G MSCNP+IGG+GKGHLV+E+ Sbjct: 4 QKKFDVIVIGGGHAGTEAALASARAGCTTLLLTHNIETLGVMSCNPSIGGIGKGHLVKEV 63 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G M D GIQFR+LN KGPAVR R QADR LY+ A+++ + +Q NL + Q Sbjct: 64 DALGGAMAAATDEGGIQFRILNASKGPAVRATRAQADRALYKQAIRKRLENQPNLWIFQQ 123 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 E+ + + Q R TVVLTTGTFL G++H+G PAGR GD PS L Sbjct: 124 PAEKLILEQGHVVGVQTQLGLSYRAKTVVLTTGTFLSGLVHVGLTNYPAGRAGDPPSIGL 183 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECG 241 ++ + TGRLKTGTP R+DG++I + ++Q D + FSFM + RQ+ C Sbjct: 184 AHNLRELGMPTGRLKTGTPPRIDGRSIDYSAMQEQHGDIPVPVFSFMGRAEQHPRQLPCW 243 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT+TN +TH II + S +++G I+ GPRYCPSIEDKI RF + HQIFLEPEGL+ Sbjct: 244 ITQTNEQTHEIIRNGLGESPLFTGVIEGVGPRYCPSIEDKITRFAGKTSHQIFLEPEGLS 303 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T +YPNGIST+L + Q + +R+I GLE +I RPGYAIEYDY +P+ L +LE+K IS Sbjct: 304 THEIYPNGISTSLSYDTQLELVRSIKGLENAHITRPGYAIEYDYFDPRGLKTSLESKTIS 363 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLFLAGQINGTTGYEEAAAQGL+AG+N+A ++ +L+ C R ++Y+GV++DDL ++GV Sbjct: 364 GLFLAGQINGTTGYEEAAAQGLLAGVNAALQAKELETWCPRRDEAYLGVLVDDLITRGVS 423 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+ LR DNAD RLT G KLG + + R + F ++ LKS Sbjct: 424 EPYRMFTSRAEYRLQLREDNADMRLTETGRKLGLVEDARWQAFEGKREKIARELERLKST 483 Query: 482 VLTSK---NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 + + + + + K+ + + Y+ L P+ S Q+L ++ +S + E+++I Sbjct: 484 WVNPRMLDKIDAERVLGKEIEREYSLYDLLRRPEVSYQSLMTLPGMHNPEASGISEQVEI 543 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + Y Y RQ E + E +P D DYS++ LS E+++KL+ KP L QA++I Sbjct: 544 LAKYHGYIERQHDEIARQEGYETTQLPLDMDYSTVRGLSIEVRQKLNQHKPQTLGQAARI 603 Query: 599 EGMTPAALNLLLIYIKKNTVKLNEIV 624 G+TPAA++LLL+++K+ K + Sbjct: 604 SGVTPAAISLLLVHLKRG-FKQEKAA 628 >gi|15925701|ref|NP_373235.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus Mu50] gi|15928296|ref|NP_375829.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus N315] gi|21284358|ref|NP_647446.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus MW2] gi|49484906|ref|YP_042130.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus MRSA252] gi|49487488|ref|YP_044709.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus MSSA476] gi|148269142|ref|YP_001248085.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus JH9] gi|150395224|ref|YP_001317899.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus JH1] gi|156981026|ref|YP_001443285.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus Mu3] gi|221141512|ref|ZP_03566005.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253316837|ref|ZP_04840050.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253733842|ref|ZP_04868007.1| glucose inhibited division protein A [Staphylococcus aureus subsp. aureus TCH130] gi|255007482|ref|ZP_05146083.2| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257793535|ref|ZP_05642514.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus A9781] gi|258420937|ref|ZP_05683871.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus A9719] gi|258438576|ref|ZP_05689799.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Staphylococcus aureus A9299] gi|258443968|ref|ZP_05692306.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Staphylococcus aureus A8115] gi|258446216|ref|ZP_05694376.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Staphylococcus aureus A6300] gi|258449125|ref|ZP_05697231.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Staphylococcus aureus A6224] gi|258454397|ref|ZP_05702365.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Staphylococcus aureus A5937] gi|282894276|ref|ZP_06302506.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus A8117] gi|282907044|ref|ZP_06314892.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus Btn1260] gi|282910023|ref|ZP_06317831.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus WW2703/97] gi|282912271|ref|ZP_06320067.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus WBG10049] gi|282918065|ref|ZP_06325815.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus D139] gi|282927747|ref|ZP_06335361.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus A10102] gi|283767787|ref|ZP_06340702.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Staphylococcus aureus subsp. aureus H19] gi|283959481|ref|ZP_06376922.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus A017934/97] gi|295406861|ref|ZP_06816665.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus A8819] gi|296275690|ref|ZP_06858197.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus MR1] gi|297209455|ref|ZP_06925853.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297245896|ref|ZP_06929758.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus A8796] gi|297589204|ref|ZP_06947845.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus MN8] gi|300911479|ref|ZP_07128928.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus TCH70] gi|304379945|ref|ZP_07362674.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|54037191|sp|P64230|MNMG_STAAN RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|54037192|sp|P64231|MNMG_STAAW RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|54041306|sp|P64229|MNMG_STAAM RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|56748944|sp|Q6G5W5|MNMG_STAAS RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|56748997|sp|Q6GD93|MNMG_STAAR RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|166200618|sp|A7X7A7|MNMG_STAA1 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|189039360|sp|A6U594|MNMG_STAA2 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|189039362|sp|A5IWD6|MNMG_STAA9 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|13702668|dbj|BAB43808.1| glucose inhibited division protein A [Staphylococcus aureus subsp. aureus N315] gi|14248486|dbj|BAB58873.1| glucose inhibited division protein A [Staphylococcus aureus subsp. aureus Mu50] gi|21205802|dbj|BAB96494.1| glucose inhibited division protein A [Staphylococcus aureus subsp. aureus MW2] gi|49243035|emb|CAG41769.1| glucose inhibited division protein A [Staphylococcus aureus subsp. aureus MRSA252] gi|49245931|emb|CAG44412.1| glucose inhibited division protein A [Staphylococcus aureus subsp. aureus MSSA476] gi|147742211|gb|ABQ50509.1| glucose inhibited division protein A [Staphylococcus aureus subsp. aureus JH9] gi|149947676|gb|ABR53612.1| glucose inhibited division protein A [Staphylococcus aureus subsp. aureus JH1] gi|156723161|dbj|BAF79578.1| glucose inhibited division protein A [Staphylococcus aureus subsp. aureus Mu3] gi|253728145|gb|EES96874.1| glucose inhibited division protein A [Staphylococcus aureus subsp. aureus TCH130] gi|257787507|gb|EEV25847.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus A9781] gi|257843127|gb|EEV67542.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus A9719] gi|257848135|gb|EEV72127.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Staphylococcus aureus A9299] gi|257850852|gb|EEV74796.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Staphylococcus aureus A8115] gi|257855042|gb|EEV77985.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Staphylococcus aureus A6300] gi|257857558|gb|EEV80453.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Staphylococcus aureus A6224] gi|257863491|gb|EEV86251.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Staphylococcus aureus A5937] gi|269942297|emb|CBI50712.1| glucose inhibited division protein A [Staphylococcus aureus subsp. aureus TW20] gi|282318350|gb|EFB48710.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus D139] gi|282323967|gb|EFB54283.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus WBG10049] gi|282326089|gb|EFB56394.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus WW2703/97] gi|282329943|gb|EFB59464.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus Btn1260] gi|282590507|gb|EFB95585.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus A10102] gi|282763321|gb|EFC03451.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus A8117] gi|283461666|gb|EFC08750.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Staphylococcus aureus subsp. aureus H19] gi|283789073|gb|EFC27900.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus A017934/97] gi|285818374|gb|ADC38861.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus 04-02981] gi|294968326|gb|EFG44351.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus A8819] gi|296885916|gb|EFH24851.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297177261|gb|EFH36514.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus A8796] gi|297577715|gb|EFH96428.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus MN8] gi|300887658|gb|EFK82854.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus TCH70] gi|302752588|gb|ADL66765.1| glucose inhibited division protein A [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304341525|gb|EFM07435.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312436862|gb|ADQ75933.1| glucose inhibited division protein A [Staphylococcus aureus subsp. aureus TCH60] gi|312831049|emb|CBX35891.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315129540|gb|EFT85532.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus CGS03] gi|315195223|gb|EFU25611.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus CGS00] gi|329315431|gb|AEB89844.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Staphylococcus aureus subsp. aureus T0131] gi|329725763|gb|EGG62242.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus 21172] Length = 625 Score = 795 bits (2053), Expect = 0.0, Method: Composition-based stats. Identities = 284/624 (45%), Positives = 395/624 (63%), Gaps = 7/624 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + + YDVIVIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VRE Sbjct: 1 MVQEYDVIVIGAGHAGVEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R I +ENL ++Q Sbjct: 61 IDALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEENLHIMQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G V E N + + + V++TTGTFLRG I +G +K +G PS + Sbjct: 121 GMVDELIIEDNEVKGVRTNIGTEYLSKAVIITTGTFLRGEIILGNMKYSSGPNHQLPSIT 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L ++ + FD R KTGTP R++ KTI + KTE Q D+ FSF T + Q+ C Sbjct: 181 LSDNLRELGFDIVRFKTGTPPRVNSKTIDYSKTEIQPGDDVGRAFSFETTEYILDQLPCW 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN ETH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG N Sbjct: 241 LTYTNAETHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRN 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETK I Sbjct: 301 TNEVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKMIK 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 L+ AGQINGT+GYEEAA QGL+AGIN+A K SR+D+YIGV+IDDL +KG Sbjct: 361 NLYTAGQINGTSGYEEAAGQGLMAGINAAGKVLNTGEKILSRSDAYIGVLIDDLVTKGTN 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAEYR+ LR DNAD RLT +G +LG I E R RF + Q+ + L + Sbjct: 421 EPYRLLTSRAEYRLLLRHDNADLRLTDMGYELGMISEERYARFNEKRQQIDAEIKRLSDI 480 Query: 482 VLTSKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 + + S +DG A + L P+ + + I + + ++ V E++ Sbjct: 481 RIKPNEHTQAIIEQHGGSRLKDGI--LAIDLLRRPEMTYDIILEILEEEHQLNADVEEQV 538 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I++ Y Y + + + +++K E++ IP+D DYS + +L+ E +EKLS +KP N+ QAS Sbjct: 539 EIQTKYEGYINKSLQQVEKVKRMEEKKIPEDLDYSKIDSLATEAREKLSEVKPLNIAQAS 598 Query: 597 KIEGMTPAALNLLLIYIKKNTVKL 620 +I G+ PA +++LLIY+++ ++ Sbjct: 599 RISGVNPADISILLIYLEQGKLQR 622 >gi|258423241|ref|ZP_05686133.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus A9635] gi|257846570|gb|EEV70592.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus A9635] gi|323439702|gb|EGA97420.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus O11] gi|323443275|gb|EGB00892.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus O46] Length = 625 Score = 795 bits (2053), Expect = 0.0, Method: Composition-based stats. Identities = 284/624 (45%), Positives = 395/624 (63%), Gaps = 7/624 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + + YDVIVIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VRE Sbjct: 1 MAQEYDVIVIGAGHAGVEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R I +ENL ++Q Sbjct: 61 IDALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEENLHIMQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G V E N + + + V++TTGTFLRG I +G +K +G PS + Sbjct: 121 GMVDELIIEDNEVKGVRTNIGTEYLSKAVIITTGTFLRGEIILGNMKYSSGPNHQLPSIT 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L ++ + FD R KTGTP R++ KTI + KTE Q D+ FSF T + Q+ C Sbjct: 181 LSDNLRELGFDIVRFKTGTPPRVNSKTIDYSKTEIQPGDDVGRAFSFETTEYILDQLPCW 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN ETH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG N Sbjct: 241 LTYTNAETHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRN 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETK I Sbjct: 301 TNEVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKMIK 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 L+ AGQINGT+GYEEAA QGL+AGIN+A K SR+D+YIGV+IDDL +KG Sbjct: 361 NLYTAGQINGTSGYEEAAGQGLMAGINAAGKVLNTGEKILSRSDAYIGVLIDDLVTKGTN 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAEYR+ LR DNAD RLT +G +LG I E R RF + Q+ + L + Sbjct: 421 EPYRLLTSRAEYRLLLRHDNADLRLTDMGYELGMISEERYARFNEKRQQIDAEIKRLSDI 480 Query: 482 VLTSKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 + + S +DG A + L P+ + + I + + ++ V E++ Sbjct: 481 RIKPNEHTQAIIEQHGGSRLKDGI--LAIDLLRRPEMTYDIILEILEEEHQLNADVEEQV 538 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I++ Y Y + + + +++K E++ IP+D DYS + +L+ E +EKLS +KP N+ QAS Sbjct: 539 EIQTKYEGYINKSLQQVEKVKRMEEKKIPEDLDYSKIDSLATEAREKLSEVKPLNIAQAS 598 Query: 597 KIEGMTPAALNLLLIYIKKNTVKL 620 +I G+ PA +++LLIY+++ ++ Sbjct: 599 RISGVNPADISILLIYLEQGKLQR 622 >gi|126667597|ref|ZP_01738566.1| glucose-inhibited division protein A [Marinobacter sp. ELB17] gi|126627866|gb|EAZ98494.1| glucose-inhibited division protein A [Marinobacter sp. ELB17] Length = 628 Score = 795 bits (2053), Expect = 0.0, Method: Composition-based stats. Identities = 290/617 (47%), Positives = 404/617 (65%), Gaps = 5/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGH+G EAA AA++G+ T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FDVIVIGGGHSGTEAALAAARMGSQTLLLTHNIETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M R D AGIQFRVLN +KGPAVR R Q DR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMARATDRAGIQFRVLNGRKGPAVRATRAQTDRILYKAAIREILENQPNLTLFQQSAD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E ++ +V Q TVVLTTGTFL G+IHIG GR GD+P+N+L Sbjct: 127 DLIVENERVTGVVTQTGIRFLGKTVVLTTGTFLGGIIHIGMKNHAGGRAGDAPANALAQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + F+ GRLKTGTP R+D +++ + ++Q+ D+ SFM + + RQ+ C ITR Sbjct: 187 LRELPFNVGRLKTGTPPRIDARSVDFSVMQQQWGDDPAPVMSFMGSRDEHPRQVCCYITR 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETH II S +++G+I GPRYCPS+EDK+ RF +++ HQIF+EPEGL T Sbjct: 247 TTEETHDIIRSGFDRSPMFTGNIGGVGPRYCPSLEDKVSRFADKSSHQIFVEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP +IQ + +++IPG EK +I+RPGYAIEYDY+NP++L TLETK I GL+ Sbjct: 307 LYPNGISTSLPFDIQVRAVQSIPGFEKAHIMRPGYAIEYDYLNPQDLRHTLETKFIQGLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AGIN+AR++ + D R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGINAARQAQEKDAWYPRRDEAYIGVLVDDLITMGTSEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R +F + RS L+ + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTDSGRELGLVDDERWSKFNAKREAIGTERSRLEGTRVH 486 Query: 485 SKNLSSTSIS---FKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 + + + G+ T E L P+ ++ I + R ++V ++++IE Sbjct: 487 PNTAAGERANQYLKQPLGRDHTLAELLRRPEIVYAHIADIA-EYRADDAVVADQVEIEIK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y RQ E + ++ E +P D DY + LSNE+K+KL +++P + QAS+++G+ Sbjct: 546 YEGYISRQADEIERLRKNENTALPVDLDYGIIGGLSNEIKQKLGVVRPETVAQASRVQGV 605 Query: 602 TPAALNLLLIYIKKNTV 618 TPAA++ +L+++KK + Sbjct: 606 TPAAISQILVHMKKREL 622 >gi|82752289|ref|YP_418030.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus RF122] gi|123549493|sp|Q2YZB9|MNMG_STAAB RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|82657820|emb|CAI82275.1| glucose inhibited division protein A [Staphylococcus aureus RF122] Length = 625 Score = 795 bits (2053), Expect = 0.0, Method: Composition-based stats. Identities = 284/624 (45%), Positives = 395/624 (63%), Gaps = 7/624 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + + YDVIVIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VRE Sbjct: 1 MVQEYDVIVIGAGHAGVEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R I +ENL ++Q Sbjct: 61 IDALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEENLHIMQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G V E N + + + V++TTGTFLRG I +G +K +G PS + Sbjct: 121 GMVDELIIEDNEVKGVRTNIGTEYLSKAVIITTGTFLRGEIILGNMKYSSGPNHQLPSIT 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L ++ + FD R KTGTP R++ KTI + KTE Q D+ FSF T + Q+ C Sbjct: 181 LSDNLRELGFDIVRFKTGTPPRVNSKTIDYSKTEIQPGDDVGRAFSFETTEYILDQLPCW 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN ETH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG N Sbjct: 241 LTYTNAETHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRN 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETK I Sbjct: 301 TNEVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKMIK 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 L+ AGQINGT+GYEEAA QGL+AGIN+A K SR+D+YIGV+IDDL +KG Sbjct: 361 NLYTAGQINGTSGYEEAAGQGLMAGINAAGKVLNTGEKILSRSDAYIGVLIDDLVTKGTN 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAEYR+ LR DNAD RLT +G +LG I E R RF + Q+ + L + Sbjct: 421 EPYRLLTSRAEYRLLLRHDNADLRLTDMGYELGMISEERYARFNEKRQQIDAEIKRLSDI 480 Query: 482 VLTSKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 + + S +DG A + L P+ + + I + + ++ V E++ Sbjct: 481 RIKPNEHTQAIIEQHGGSRLKDGI--LAIDLLRRPEMTYDIILEILEEEHQLNADVEEQV 538 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I++ Y Y + + + +++K E++ IP+D DYS + +L+ E +EKLS +KP N+ QAS Sbjct: 539 EIQTKYEGYINKSLQQVEKVKRMEEKKIPEDLDYSKIDSLATEAREKLSEVKPLNIAQAS 598 Query: 597 KIEGMTPAALNLLLIYIKKNTVKL 620 +I G+ PA +++LLIY+++ ++ Sbjct: 599 RISGVNPADISILLIYLEQGKLQR 622 >gi|70727674|ref|YP_254590.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus haemolyticus JCSC1435] gi|81170579|sp|Q4L2Z3|MNMG_STAHJ RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|68448400|dbj|BAE05984.1| glucose inhibited division protein A [Staphylococcus haemolyticus JCSC1435] Length = 625 Score = 794 bits (2052), Expect = 0.0, Method: Composition-based stats. Identities = 281/624 (45%), Positives = 395/624 (63%), Gaps = 7/624 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + + YDVIVIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VRE Sbjct: 1 MVQEYDVIVIGAGHAGIEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R I ++NLD++Q Sbjct: 61 IDALGGQMAKAIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEDNLDIMQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G V E N + + + R VV+TTGTFLRG I +G +K +G PS + Sbjct: 121 GMVDELIIEDNEVKGVRTNIGTEYRAQAVVITTGTFLRGEIILGNMKYSSGPNHQLPSIT 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L ++ + F+ R KTGTP R++ KTI + KTE Q D+ FSF T + Q+ C Sbjct: 181 LADNLRELGFEVVRFKTGTPPRVNAKTIDYSKTEIQPGDDVGRAFSFETTEYILDQLPCW 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN TH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG N Sbjct: 241 LTYTNDRTHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRN 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETK I Sbjct: 301 TNEVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKMIK 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 L+ AGQINGT+GYEEAA QG++AGIN+A K SR+D+YIGV+IDDL +KG Sbjct: 361 NLYTAGQINGTSGYEEAAGQGIMAGINAAGKVLGTGEKILSRSDAYIGVLIDDLVTKGTN 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAEYR+ LR DNAD RLT +G +LG I E R RF + Q+ L + Sbjct: 421 EPYRLLTSRAEYRLLLRHDNADLRLTDVGYELGMISEERYARFNEKRQQIQDEIQRLTDI 480 Query: 482 VLTSKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 + + + S +DG A + L P+ + + I ++ + V E++ Sbjct: 481 RIKPNEHTQSVIEANGGSRLKDGI--LAIDLLRRPEMTYNTILEILEESHQLPEAVEEQV 538 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I++ Y Y + + + +++K E++ IP+D DYS + +L+ E +EKL+ +KP N+ QAS Sbjct: 539 EIQTKYEGYINKSLQQVEKVKRMEEKKIPEDLDYSKVDSLATEAREKLAEVKPLNIAQAS 598 Query: 597 KIEGMTPAALNLLLIYIKKNTVKL 620 +I G+ PA +++LL+Y+++ ++ Sbjct: 599 RISGVNPADISILLVYLEQGKLQR 622 >gi|311070642|ref|YP_003975565.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus atrophaeus 1942] gi|310871159|gb|ADP34634.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bacillus atrophaeus 1942] Length = 628 Score = 794 bits (2052), Expect = 0.0, Method: Composition-based stats. Identities = 274/619 (44%), Positives = 382/619 (61%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDVIVIG GHAG EAA +A+ GA T ++T + M CNP++GG KG +VREIDA Sbjct: 7 QYDVIVIGAGHAGVEAALASARQGAKTLVLTINLDMVAFMPCNPSVGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M R D IQ R+LN KGPAVR R QAD+ Y+ M+ + + NL ++QG Sbjct: 67 LGGEMARNIDKTHIQMRMLNTGKGPAVRALRAQADKFQYQHEMKNTLEKEPNLTLLQGIA 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E +V Q + R VVLTTGT+LRG I +G L +G PS L Sbjct: 127 ERLIIEDGECRGVVTQTGAHYRSKAVVLTTGTYLRGRIILGDLSYSSGPNNQQPSIKLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R+ G +I + KTE Q DE FS+ T + Q+ C +T Sbjct: 187 HLEELGFDLVRFKTGTPPRVKGDSIDYSKTEIQPGDEVPRAFSYETVEYITDQLPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETH II N+ S +YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSPETHEIIDNNLHRSPMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q + + TIPGLEKV ++R GYAIEYD I P +L+PTLETKKIS LF Sbjct: 307 VYVQGLSTSLPEDVQQRMLSTIPGLEKVQMMRAGYAIEYDAIVPTQLWPTLETKKISNLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QG++AGIN+ RK+ + + SR+D+YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGIMAGINAGRKALDREEVILSRSDAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT IG ++G I + R + F + L S+++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEIGHRIGLISDERFQSFQTKKAAIEAEKKRLYSVIIK 486 Query: 485 SKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + S S +DG T + + P+ + +++ + P + V E+++I+ Sbjct: 487 PSEENQKYIRSLGGSELKDGVRGT--DLMKRPEMNYESVTKLAPAETPVAPEVAEQVEIQ 544 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + +++K E + IP DY ++ ++ E ++KL ++P ++ QAS+I Sbjct: 545 VKYEGYIEKSLQQVEKLKKMENKKIPDRIDYDAIKGIATEARQKLKEVRPLSVAQASRIS 604 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+Y+++ + Sbjct: 605 GVNPADISILLVYLEQGRI 623 >gi|172059048|ref|YP_001815508.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Exiguobacterium sibiricum 255-15] gi|205831509|sp|B1YGA7|MNMG_EXIS2 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|171991569|gb|ACB62491.1| glucose inhibited division protein A [Exiguobacterium sibiricum 255-15] Length = 628 Score = 794 bits (2052), Expect = 0.0, Method: Composition-based stats. Identities = 276/616 (44%), Positives = 387/616 (62%), Gaps = 3/616 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVIVIG GHAG EA+ AA++G+ T ++T +G M CNP+IGG KG +VREIDA Sbjct: 7 EFDVIVIGAGHAGIEASLAAARMGSKTVMLTMNPDMVGFMYCNPSIGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M R DA IQ ++LN KGPAVR R QAD+ Y+ M++ + + NL + Q V Sbjct: 67 LGGEMARAIDATYIQMKMLNTSKGPAVRALRAQADKFEYQNRMKKALEDEPNLLLRQALV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + +V + R V++TTGTF+RG I IG+L +G PS +L Sbjct: 127 ERLIIEDDTCVGVVTNTGAEYRAKAVIITTGTFMRGKIIIGELSYESGPNNQMPSVNLSK 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F+ R KTGTP R+DGKTI + KTE Q D +PFS T ++ QI C +T Sbjct: 187 HLEELGFELARFKTGTPPRIDGKTIDYSKTEIQPGDAVALPFSHETTQMITEQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T TH++I N+ S ++SG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG +T+ Sbjct: 247 TTEYTHQLIDANLHRSPMFSGMIKGTGPRYCPSIEDKVVRFSDKPRHQIFLEPEGRDTEE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++QH +R+IPGLEK ++RPGYAIEYD + P +L+PTLETK+I+GLF Sbjct: 307 VYVQGLSTSLPEDVQHDILRSIPGLEKSEMMRPGYAIEYDAVVPTQLWPTLETKRIAGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QG++AGIN+A K + D + SR+ YIGVMIDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGIMAGINAALKVQERDPLILSRSQGYIGVMIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RL+ IG LG I E R + A+ ++ L+ +V+ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLSDIGYDLGLINETRHAKLAEKKEDIQREMKRLEKVVIK 486 Query: 485 SK---NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 + N T I + A L P+ + + + P S E+++I+ Sbjct: 487 ATSEVNERLTEIGVSPLKEALHAITLLKRPEITYAMIADMTPPPVALSEEAAEQVEIQVK 546 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y +Q+ + + + EK+ IP+ DY + L+ E K+KL+ ++P ++ QAS+I G+ Sbjct: 547 YAGYIDKQLDQVERMMRMEKKRIPERLDYDVISGLAIEAKQKLNQVRPLSIGQASRISGV 606 Query: 602 TPAALNLLLIYIKKNT 617 P+ +++LL+YI++ Sbjct: 607 NPSDISILLVYIEQGQ 622 >gi|258411159|ref|ZP_05681438.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Staphylococcus aureus A9763] gi|257840044|gb|EEV64509.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Staphylococcus aureus A9763] Length = 625 Score = 794 bits (2052), Expect = 0.0, Method: Composition-based stats. Identities = 284/624 (45%), Positives = 395/624 (63%), Gaps = 7/624 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + + YDVIVIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VRE Sbjct: 1 MVQEYDVIVIGAGHAGVEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R I +ENL ++Q Sbjct: 61 IDALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEENLHIMQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G V E N + + + V++TTGTFLRG I +G +K +G PS + Sbjct: 121 GMVDELIIEDNEVKGVRTNIGTEYLSKAVIITTGTFLRGEIILGNMKYSSGPNHQLPSIT 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L ++ + FD R KTGTP R++ KTI + KTE Q D+ FSF T + Q+ C Sbjct: 181 LSDNLRELGFDIVRFKTGTPPRVNSKTIDYSKTEIQPGDDVGRAFSFETTEYILDQLPCW 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN ETH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG N Sbjct: 241 LTYTNAETHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRN 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETK I Sbjct: 301 TNEVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKMIK 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 L+ AGQINGT+GYEEAA QGL+AGIN+A K SR+D+YIGV+IDDL +KG Sbjct: 361 NLYTAGQINGTSGYEEAAGQGLMAGINAAGKVLNTGEKILSRSDAYIGVLIDDLVTKGTN 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAEYR+ LR DNAD RLT +G +LG I E R RF + Q+ + L + Sbjct: 421 EPYRLLTSRAEYRLLLRHDNADLRLTDMGYELGMISEERYARFNEKRQQIDAEIKRLSDI 480 Query: 482 VLTSKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 + + S +DG A + L P+ + + I + + ++ V E++ Sbjct: 481 RIKPNEHTQAIIEQHGGSRLKDGI--LAIDLLRRPEMTYDIVLEILEEEHQLNADVEEQV 538 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I++ Y Y + + + +++K E++ IP+D DYS + +L+ E +EKLS +KP N+ QAS Sbjct: 539 EIQTKYEGYINKSLQQVEKVKRMEEKKIPEDLDYSKIDSLATEAREKLSEVKPLNIAQAS 598 Query: 597 KIEGMTPAALNLLLIYIKKNTVKL 620 +I G+ PA +++LLIY+++ ++ Sbjct: 599 RISGVNPADISILLIYLEQGKLQR 622 >gi|27469334|ref|NP_765971.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus epidermidis ATCC 12228] gi|57865943|ref|YP_187604.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus epidermidis RP62A] gi|282874717|ref|ZP_06283596.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus epidermidis SK135] gi|38257565|sp|Q8CMN6|MNMG_STAES RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|71152074|sp|Q5HS35|MNMG_STAEQ RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|27316884|gb|AAO06059.1|AE016752_92 glucose inhibited division protein A [Staphylococcus epidermidis ATCC 12228] gi|57636601|gb|AAW53389.1| glucose inhibited division protein A [Staphylococcus epidermidis RP62A] gi|281296433|gb|EFA88948.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus epidermidis SK135] gi|319399918|gb|EFV88164.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus epidermidis FRI909] gi|329724153|gb|EGG60671.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus epidermidis VCU144] Length = 625 Score = 794 bits (2052), Expect = 0.0, Method: Composition-based stats. Identities = 279/624 (44%), Positives = 397/624 (63%), Gaps = 7/624 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + + YDV+VIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VRE Sbjct: 1 MVQEYDVVVIGAGHAGIEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R + +++NLD++Q Sbjct: 61 IDALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVLENEDNLDIMQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G V E N + + + R V++TTGTFLRG I +G LK +G PS + Sbjct: 121 GMVDELIIEDNEVKGVRTNIGTEYRSKAVIITTGTFLRGEIILGNLKYSSGPNHQLPSVT 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L ++ K FD R KTGTP R++ +TI + KTE Q D+ FSF T + Q+ C Sbjct: 181 LADNLRKLGFDIVRFKTGTPPRVNARTIDYSKTEIQPGDDIGRAFSFETTEFILDQLPCW 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN +TH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG N Sbjct: 241 LTYTNGDTHQVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRN 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETK I Sbjct: 301 TNEVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKAIK 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 L+ AGQINGT+GYEEAA QG++AGIN+A SR+D+YIGV+IDDL +KG Sbjct: 361 NLYTAGQINGTSGYEEAAGQGIMAGINAAGNVLGTGEKILSRSDAYIGVLIDDLVTKGTN 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAEYR+ LR DNAD RLT +G +LG I E R RF + Q+ L + Sbjct: 421 EPYRLLTSRAEYRLLLRHDNADLRLTDMGYELGLISEERYARFNEKRQQIKDEIQRLTDV 480 Query: 482 VLTSKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 + + + S +DG A + L P+ + + + I ++ + V E++ Sbjct: 481 RIKPNEHTQAIIEAKGGSRLKDGI--LAIDLLRRPEMNYETILEILEESHQLPEAVEEQV 538 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I++ Y Y + + + +++K E + IP+D DYS + +L++E +EKL+ +KP N+ QAS Sbjct: 539 EIQTKYEGYINKSLQQVEKVKRMEAKKIPEDLDYSKVDSLASEAREKLAEVKPLNIAQAS 598 Query: 597 KIEGMTPAALNLLLIYIKKNTVKL 620 +I G+ PA +++LL+Y+++ ++ Sbjct: 599 RISGVNPADISILLVYLEQGKLQR 622 >gi|329735765|gb|EGG72046.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus epidermidis VCU028] Length = 625 Score = 794 bits (2052), Expect = 0.0, Method: Composition-based stats. Identities = 279/624 (44%), Positives = 397/624 (63%), Gaps = 7/624 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + + YDV+VIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VRE Sbjct: 1 MVQEYDVVVIGAGHAGIEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R + +++NLD++Q Sbjct: 61 IDALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVLENEDNLDIMQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G V E N + + + R V++TTGTFLRG I +G LK +G PS + Sbjct: 121 GMVDELIIEDNEVKGVRTNIGTEYRSKAVIITTGTFLRGEIILGNLKYSSGPNHQLPSVT 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L ++ K FD R KTGTP R++ +TI + KTE Q D+ FSF T + Q+ C Sbjct: 181 LADNLRKLGFDIVRFKTGTPPRVNARTIDYSKTEIQPGDDIDRAFSFETTEFILNQLPCW 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN +TH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG N Sbjct: 241 LTYTNGDTHQVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRN 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETK I Sbjct: 301 TNEVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKAIK 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 L+ AGQINGT+GYEEAA QG++AGIN+A SR+D+YIGV+IDDL +KG Sbjct: 361 NLYTAGQINGTSGYEEAAGQGIMAGINAAGNVLGTGEKILSRSDAYIGVLIDDLVTKGTN 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAEYR+ LR DNAD RLT +G +LG I E R RF + Q+ L + Sbjct: 421 EPYRLLTSRAEYRLLLRHDNADLRLTDMGYELGLISEERYARFNEKRQQIKDEIQRLTDV 480 Query: 482 VLTSKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 + + + S +DG A + L P+ + + + I ++ + V E++ Sbjct: 481 RIKPNEHTQAIIEAKGGSRLKDGI--LAIDLLRRPEMNYETILEILEESHQLPEAVEEQV 538 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I++ Y Y + + + +++K E + IP+D DYS + +L++E +EKL+ +KP N+ QAS Sbjct: 539 EIQTKYEGYINKSLQQVEKVKRMEAKKIPEDLDYSKVDSLASEAREKLAEVKPLNIAQAS 598 Query: 597 KIEGMTPAALNLLLIYIKKNTVKL 620 +I G+ PA +++LL+Y+++ ++ Sbjct: 599 RISGVNPADISILLVYLEQGKLQR 622 >gi|282902628|ref|ZP_06310521.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus C160] gi|282921287|ref|ZP_06329005.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus C427] gi|282315702|gb|EFB46086.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus C427] gi|282597087|gb|EFC02046.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus C160] Length = 625 Score = 794 bits (2051), Expect = 0.0, Method: Composition-based stats. Identities = 284/624 (45%), Positives = 396/624 (63%), Gaps = 7/624 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + + YDVIVIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VRE Sbjct: 1 MVQEYDVIVIGAGHAGVEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R I +ENL ++Q Sbjct: 61 IDALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEENLHIMQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G V E N + + + V++TTGTFLRG I +G +K +G PS + Sbjct: 121 GMVDELIIEDNEVKGVRTNIGTEYLSKAVIITTGTFLRGEIILGNMKYSSGPNHQLPSIT 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L ++ + FD R KTGTP R++ KTI + KTE Q D+ FSF T + Q+ C Sbjct: 181 LSDNLRELGFDIVRFKTGTPPRVNSKTIDYSKTEIQPGDDVGRAFSFETTEYILDQLPCW 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN ETH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG N Sbjct: 241 LTYTNAETHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRN 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETK I Sbjct: 301 TNEVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKMIK 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 L+ AGQINGT+GYEEAA QGL+AGIN+A K SR+D+YIGV+IDDL +KG Sbjct: 361 NLYTAGQINGTSGYEEAAGQGLMAGINAAGKVLNTGEKILSRSDAYIGVLIDDLVTKGTN 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAEYR+ LR DNAD RLT +G +LG I E R RF + Q+ + L + Sbjct: 421 EPYRLLTSRAEYRLLLRHDNADLRLTDMGYELGMISEERYARFNEKRQQIDAEIKRLSDI 480 Query: 482 VLTSKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 + + S +DG A + L P+ + + I + + ++ V E++ Sbjct: 481 RIKPNEHTQAIIEQHGGSRLKDGI--LAIDLLRRPEMTYDIILEILEEEHQLNADVEEQV 538 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I++ Y Y + + + +++K E++ IP+D DYS + +L+ E +EKLS +KP N+ QAS Sbjct: 539 EIQTKYEGYINKSLQQVEKVKRMEEKKIPEDLDYSKIDSLATEAREKLSEVKPLNIAQAS 598 Query: 597 KIEGMTPAALNLLLIYIKKNTVKL 620 +I G+ PA +++LLIY++++ ++ Sbjct: 599 RISGVNPADISILLIYLEQSKLQR 622 >gi|302334325|gb|ADL24518.1| glucose inhibited division protein A [Staphylococcus aureus subsp. aureus JKD6159] Length = 625 Score = 794 bits (2051), Expect = 0.0, Method: Composition-based stats. Identities = 283/624 (45%), Positives = 395/624 (63%), Gaps = 7/624 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + + YDVIVIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VRE Sbjct: 1 MAQEYDVIVIGAGHAGVEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R I +ENL ++Q Sbjct: 61 IDALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEENLHIMQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G V E N + + + V++TTGTFLRG I +G +K +G PS + Sbjct: 121 GMVDELIIEDNEVKGVRTNIGTEYLSKAVIITTGTFLRGEIILGNMKYSSGPNHQLPSIT 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L ++ + FD R KTGTP R++ KTI + KTE Q D+ FSF T + Q+ C Sbjct: 181 LSDNLRELGFDIVRFKTGTPPRVNSKTIDYSKTEIQPGDDVGRAFSFETTEYILDQLPCW 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN ETH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG N Sbjct: 241 LTYTNAETHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRN 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETK I Sbjct: 301 TNEVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKMIK 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 L+ AGQINGT+GYEEAA QGL+AGIN+A K SR+D+YIGV+IDDL +KG Sbjct: 361 NLYTAGQINGTSGYEEAAGQGLMAGINAAGKVLNTGEKILSRSDAYIGVLIDDLVTKGTN 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAEYR+ LR DNAD RLT +G +LG I E R RF + ++ + L + Sbjct: 421 EPYRLLTSRAEYRLLLRHDNADLRLTDMGYELGMISEERYARFNEKRKQIDAEIKRLSDI 480 Query: 482 VLTSKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 + + S +DG A + L P+ + + I + + ++ V E++ Sbjct: 481 RIKPNEHTQAIIEQHGGSRLKDGI--LAIDLLRRPEMTYDIILEILEEEHQLNADVEEQV 538 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I++ Y Y + + + +++K E++ IP+D DYS + +L+ E +EKLS +KP N+ QAS Sbjct: 539 EIQTKYEGYINKSLQQVEKVKRMEEKKIPEDLDYSKIDSLATEAREKLSEVKPLNIAQAS 598 Query: 597 KIEGMTPAALNLLLIYIKKNTVKL 620 +I G+ PA +++LLIY+++ ++ Sbjct: 599 RISGVNPADISILLIYLEQGKLQR 622 >gi|293367585|ref|ZP_06614238.1| glucose inhibited division protein A [Staphylococcus epidermidis M23864:W2(grey)] gi|291318298|gb|EFE58691.1| glucose inhibited division protein A [Staphylococcus epidermidis M23864:W2(grey)] gi|329736135|gb|EGG72408.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus epidermidis VCU045] Length = 625 Score = 794 bits (2051), Expect = 0.0, Method: Composition-based stats. Identities = 279/624 (44%), Positives = 397/624 (63%), Gaps = 7/624 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + + YDV+VIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VRE Sbjct: 1 MVQEYDVVVIGAGHAGIEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R + +++NLD++Q Sbjct: 61 IDALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVLENEDNLDIMQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G V E N + + + R V++TTGTFLRG I +G LK +G PS + Sbjct: 121 GMVDELIIEDNEVKGVRTNIGTEYRSKAVIITTGTFLRGEIILGNLKYSSGPNHQLPSVT 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L ++ K FD R KTGTP R++ +TI + KTE Q D+ FSF T + Q+ C Sbjct: 181 LADNLRKLGFDIVRFKTGTPPRVNARTIDYSKTEIQPGDDIGRAFSFETTEFILNQLPCW 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN +TH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG N Sbjct: 241 LTYTNGDTHQVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRN 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETK I Sbjct: 301 TNEVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKAIK 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 L+ AGQINGT+GYEEAA QG++AGIN+A SR+D+YIGV+IDDL +KG Sbjct: 361 NLYTAGQINGTSGYEEAAGQGIMAGINAAGNVLGTGEKILSRSDAYIGVLIDDLVTKGTN 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAEYR+ LR DNAD RLT +G +LG I E R RF + Q+ L + Sbjct: 421 EPYRLLTSRAEYRLLLRHDNADLRLTDMGYELGLISEERYARFNEKRQQIKDEIQRLTDV 480 Query: 482 VLTSKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 + + + S +DG A + L P+ + + + I ++ + V E++ Sbjct: 481 RIKPNEHTQAIIEAKGGSRLKDGI--LAIDLLRRPEMNYETILEILEESHQLPEAVEEQV 538 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I++ Y Y + + + +++K E + IP+D DYS + +L++E +EKL+ +KP N+ QAS Sbjct: 539 EIQTKYEGYINKSLQQVEKVKRMEAKKIPEDLDYSKVDSLASEAREKLAEVKPLNIAQAS 598 Query: 597 KIEGMTPAALNLLLIYIKKNTVKL 620 +I G+ PA +++LL+Y+++ ++ Sbjct: 599 RISGVNPADISILLVYLEQGKLQR 622 >gi|146309631|ref|YP_001190096.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pseudomonas mendocina ymp] gi|166222721|sp|A4Y198|MNMG_PSEMY RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|145577832|gb|ABP87364.1| glucose inhibited division protein A [Pseudomonas mendocina ymp] Length = 630 Score = 794 bits (2051), Expect = 0.0, Method: Composition-based stats. Identities = 287/621 (46%), Positives = 384/621 (61%), Gaps = 5/621 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GK HLV+E Sbjct: 3 FPSRFDVIVIGGGHAGTEAALAAARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M D GIQFR+LN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 63 IDALGGAMATATDKGGIQFRILNSRKGPAVRATRAQADRVLYKAAVREILENQANLWIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 E + +V Q +VVLTTGTFL G+IHIG GR GD PS + Sbjct: 123 QAADDLIVENAQVKGVVTQMGLRFHADSVVLTTGTFLGGLIHIGLQNYSGGRAGDPPSMA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKIT-NRQIEC 240 L + + GRLKTGTP R+DG+++ + +Q D SF+ + +QI C Sbjct: 183 LAHRLRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPTPLMSFLGKREHQPKQISC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN TH II N+ S +YSG I+ GPRYCPSIEDKI RF +++ HQ+F+EPEGL Sbjct: 243 WITHTNARTHEIIAANLDRSPMYSGVIEGVGPRYCPSIEDKIHRFADKDSHQVFIEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T +YPNGIST+LP ++Q Q +R+I G+E +I+RPGYAIEYDY +P++L +LETK I Sbjct: 303 TTHELYPNGISTSLPFDVQLQIVRSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKVI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQINGTTGYEEA AQGL+AG N+A ++ + C R ++YIGV++DDL + G Sbjct: 363 GGLFFAGQINGTTGYEEAGAQGLLAGCNAALRAQGKEAWCPRRDEAYIGVLVDDLITLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS Sbjct: 423 QEPYRMFTSRAEYRLILREDNADLRLTEKGRELGLVDDERWAAFEAKREGIVREEQRLKS 482 Query: 481 LVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 + +I+ + L+ P+ L I ++ + V E+++ Sbjct: 483 TWVRPGTPQGDAIAARFGTPLAHEYNLLNLLARPEIDYAALAEIT-ESPAVDNQVAEQVE 541 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I++ YA Y RQ E ++ E +P+D DYS++ LS E++ KL +P L QA + Sbjct: 542 IKTKYAGYIDRQQDEIARLRASEDTKLPEDLDYSAISGLSKEIQFKLGNTRPATLGQAGR 601 Query: 598 IEGMTPAALNLLLIYIKKNTV 618 I G+TPAA++LLLI++KK + Sbjct: 602 IPGVTPAAISLLLIHLKKRSA 622 >gi|283471925|emb|CAQ51136.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus ST398] Length = 625 Score = 794 bits (2051), Expect = 0.0, Method: Composition-based stats. Identities = 283/624 (45%), Positives = 395/624 (63%), Gaps = 7/624 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + + YDVIVIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VRE Sbjct: 1 MVQEYDVIVIGAGHAGVEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R I +ENL ++Q Sbjct: 61 IDALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEENLHIMQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G V E N + + + V++TTGTFLRG I +G +K +G PS + Sbjct: 121 GMVDELIIEDNEVKGVRTNIGTEYLSKAVIITTGTFLRGEIILGNMKYSSGPNHQLPSIT 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L ++ + F+ R KTGTP R++ KTI + KTE Q D+ FSF T + Q+ C Sbjct: 181 LSDNLRELGFEIVRFKTGTPPRVNSKTIDYSKTEIQPGDDVGRAFSFETTEYILDQLPCW 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN ETH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG N Sbjct: 241 LTYTNAETHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRN 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETK I Sbjct: 301 TNEVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKMIK 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 L+ AGQINGT+GYEEAA QGL+AGIN+A K SR+D+YIGV+IDDL +KG Sbjct: 361 NLYTAGQINGTSGYEEAAGQGLMAGINAAGKVLNTGEKILSRSDAYIGVLIDDLVTKGTN 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAEYR+ LR DNAD RLT +G +LG I E R RF + Q+ + L + Sbjct: 421 EPYRLLTSRAEYRLLLRHDNADLRLTDMGYELGMISEERYARFNEKRQQIDAEIKRLSDI 480 Query: 482 VLTSKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 + + S +DG A + L P+ + + I + + ++ V E++ Sbjct: 481 RIKPNEHTQAIIEQHGGSRLKDGI--LAIDLLRRPEMTYDIILEILEEEHQLNADVEEQV 538 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I++ Y Y + + + +++K E++ IP+D DYS + +L+ E +EKLS +KP N+ QAS Sbjct: 539 EIQTKYEGYINKSLQQVEKVKRMEEKKIPEDLDYSKIDSLATEAREKLSEVKPLNIAQAS 598 Query: 597 KIEGMTPAALNLLLIYIKKNTVKL 620 +I G+ PA +++LLIY+++ ++ Sbjct: 599 RISGVNPADISILLIYLEQGKLQR 622 >gi|224475498|ref|YP_002633104.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus carnosus subsp. carnosus TM300] gi|222420105|emb|CAL26919.1| glucose inhibited division protein A [Staphylococcus carnosus subsp. carnosus TM300] Length = 624 Score = 794 bits (2051), Expect = 0.0, Method: Composition-based stats. Identities = 277/622 (44%), Positives = 395/622 (63%), Gaps = 3/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 ++ YDVIVIG GHAG EA +A+ GA T ++T +G M CNP++GG KG +VRE Sbjct: 1 MSLDYDVIVIGAGHAGIEAGLASARRGAKTLMLTINLDNVGFMPCNPSVGGPAKGIVVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R + +ENL ++Q Sbjct: 61 IDALGGQMAKTIDRTHIQMRMLNTGKGPAVRALRAQADKVLYQKEMKRVLEDEENLHIMQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G V E + I + + R VV+TTGTFLRG I +G LK +G PS + Sbjct: 121 GMVDELIIEDDEIKGVRTNIGTEYRSKAVVITTGTFLRGEIILGNLKYSSGPNHQLPSVT 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L ++ + FD R KTGTP R++ KTI + KTE Q D+ FSF T + Q+ C Sbjct: 181 LADNLRELGFDIVRFKTGTPPRVNAKTIDYSKTEIQPGDDVGRAFSFETTEFILDQLPCW 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN +TH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG + Sbjct: 241 LTYTNDKTHQVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKYVRFNDKPRHQLFLEPEGRD 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ VY G+ST+LPE +Q + ++TI GLEK +++R GYAIEYD I P +L+PTLETKKI Sbjct: 301 TNEVYVQGLSTSLPEHVQREMLQTIEGLEKADMMRAGYAIEYDAIVPTQLWPTLETKKIK 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 L+ AGQINGT+GYEEAA QG++AGIN+A + SR+D+YIGV+IDDL +KG Sbjct: 361 NLYTAGQINGTSGYEEAAGQGIMAGINAAGRVLGTGEKVLSRSDAYIGVLIDDLVTKGTN 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAEYR+ LR DNAD RLT +G +LG I + R RF + + + L ++ Sbjct: 421 EPYRLLTSRAEYRLLLRHDNADLRLTDLGHELGMISDERYARFNEKRDQIEAEINRLTNI 480 Query: 482 VLTSKNLSSTSISFKQDGKT---RTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 + + I + A E L P+ Q + I + + + V E+++I Sbjct: 481 RIKPNEHTQEVIKSRNGSPLKDGILAIELLRRPEMDYQAILDILEEDHQIPADVEEQVEI 540 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 ++ Y Y + + + +++K E++ IP D DYS + +L++E +EKL+ +KP N+ QAS+I Sbjct: 541 QTKYEGYINKSLQQVEKVKRMEQKKIPHDLDYSKIDSLASEAREKLAEVKPLNIAQASRI 600 Query: 599 EGMTPAALNLLLIYIKKNTVKL 620 G+ PA +++LL+Y+++ ++ Sbjct: 601 SGVNPADISILLVYLEQGKLER 622 >gi|149925397|ref|ZP_01913661.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Limnobacter sp. MED105] gi|149825514|gb|EDM84722.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Limnobacter sp. MED105] Length = 650 Score = 794 bits (2050), Expect = 0.0, Method: Composition-based stats. Identities = 300/627 (47%), Positives = 397/627 (63%), Gaps = 12/627 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 +DVIV+GGGHAG EAA AA+ G+ T L+TH T+G MSCNP+IGG+GKGHLV+E+D Sbjct: 5 EEFDVIVVGGGHAGTEAALAAARAGSKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q Sbjct: 65 ALGGAMAIATDEAGIQFRILNGSKGPAVRATRAQADRVLYRQAIRTRLENQHNLSIFQQS 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + + + V Q + VVLT GTFL G IH+G AGR GD PS L Sbjct: 125 VEDLLLDGDRVCGAVTQVGLKFKAKAVVLTAGTFLNGKIHVGLQNYSAGRAGDPPSIGLG 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTD-KITNRQIECG 241 + GRLKTGTP R+DG++I + ++Q D +P FS++ + + RQ+ C Sbjct: 185 MRLQEMKLPQGRLKTGTPPRIDGRSIDFSVMQEQPGDLDPVPVFSYLGNTAMHPRQLPCW 244 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL Sbjct: 245 ITHTNQNTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFADKESHQIFLEPEGLT 304 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ YPNG+ST+LP ++Q + +I GLE I+RPGYAIEYDY +P+ L TLETK I Sbjct: 305 TNEYYPNGVSTSLPFDVQLNLLHSIKGLENAYIMRPGYAIEYDYFDPRALKTTLETKAIE 364 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQINGTTGYEEAAAQGL+AG+N+A D R ++Y+GV++DDLTSKGV Sbjct: 365 GLFFAGQINGTTGYEEAAAQGLLAGVNAALLVQGKDQWTPRRDEAYLGVLVDDLTSKGVA 424 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+SLR DNAD RLTPIG KLG + + R K F++ + + L+S Sbjct: 425 EPYRMFTSRAEYRLSLREDNADQRLTPIGRKLGLVDDIRWKAFSEKREAVELEKQRLRST 484 Query: 482 VLTSK---NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFS-------SL 531 + K + + K + Y+ L PD S Q+L ++ + + + Sbjct: 485 WINPKIVAQAEAERVLHKGIDREYNLYDLLKRPDVSYQDLSTLSKENGDLALSNPLEQTD 544 Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 +I +L+IE YA Y RQ E + E +P DFDYS + LS E+++KL+ KP Sbjct: 545 LISQLEIEVKYAGYVLRQQAEVERGAGNESIRLPADFDYSGVNGLSKEVQQKLNTHKPET 604 Query: 592 LLQASKIEGMTPAALNLLLIYIKKNTV 618 + QA +I+G+TPAA++LLL+++KK + Sbjct: 605 IGQAGRIQGVTPAAISLLLVHLKKRDL 631 >gi|226947204|ref|YP_002802277.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Azotobacter vinelandii DJ] gi|226722131|gb|ACO81302.1| Glucose-inhibited division protein A, gidA [Azotobacter vinelandii DJ] Length = 631 Score = 794 bits (2050), Expect = 0.0, Method: Composition-based stats. Identities = 288/624 (46%), Positives = 389/624 (62%), Gaps = 5/624 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +DVIVIGGGHAG EAA AA++G T L++H T+G MSCNPAIGG+GK HLV+E Sbjct: 4 FPSRFDVIVIGGGHAGTEAALAAARMGVKTLLLSHNVETLGHMSCNPAIGGIGKSHLVKE 63 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M R D AGIQFRVLN +KGPAVR R QADR LY+ ++R + +Q NL + Q Sbjct: 64 IDALGGAMARATDVAGIQFRVLNSRKGPAVRATRAQADRALYKAEIRRILENQPNLWIFQ 123 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 E + +V Q R VVLT GTFL G+IHIG GR GD PS + Sbjct: 124 QSADDLIVEGEQVRGVVTQMGLKFRADNVVLTAGTFLGGLIHIGLENYSGGRAGDPPSQA 183 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIEC 240 L + GRLKTGTP R+DG++I + +Q D + SF+ + + RQ+ C Sbjct: 184 LARRLRELPLRVGRLKTGTPPRIDGRSIDFSAMTEQPGDTPVPVMSFLGSREQHPRQVSC 243 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN TH+II N+ S +YSG I+ GPRYCPSIEDKI RF +++ HQ+FLEPEGL Sbjct: 244 WITHTNARTHQIIAANLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKDSHQVFLEPEGL 303 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 +T VYPNGIST+LP ++Q + +R+I GLE +I+RPGYAIEYD+ +P++L +LETK I Sbjct: 304 STHEVYPNGISTSLPFDVQLEIVRSIRGLENAHIVRPGYAIEYDFFDPRDLKYSLETKVI 363 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQINGTTGYEEA AQGL+AG N+A ++ + C R ++Y+GV++DDL + G Sbjct: 364 GGLFFAGQINGTTGYEEAGAQGLLAGANAALRAQGREAWCPRRDEAYLGVLVDDLITLGT 423 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LK+ Sbjct: 424 QEPYRMFTSRAEYRLILREDNADLRLTEQGRELGLVDDARWAAFCAKREGIEREEQRLKT 483 Query: 481 LVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 + +++ + + L+ P+ +L + + V E+++ Sbjct: 484 TWVRPGTPQGKAVAARFGSPLAREYNLLNLLARPEVDYASLVELTGGGAE-DEQVAEQVE 542 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I++ YA Y RQ E ++ E +P++ DY+S+ LS E++ KL +P L QAS+ Sbjct: 543 IKTKYAGYIDRQQDEIARLRASESVRLPENLDYASISGLSKEIQHKLGQGRPQTLGQASR 602 Query: 598 IEGMTPAALNLLLIYIKKNTVKLN 621 I G+TPAA++LLLI++KK N Sbjct: 603 IPGVTPAAISLLLIHLKKRDAGRN 626 >gi|119776787|ref|YP_929527.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shewanella amazonensis SB2B] gi|166200610|sp|A1SBV1|MNMG_SHEAM RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|119769287|gb|ABM01858.1| glucose-inhibited division protein A [Shewanella amazonensis SB2B] Length = 629 Score = 793 bits (2049), Expect = 0.0, Method: Composition-based stats. Identities = 285/622 (45%), Positives = 379/622 (60%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 FHERFDVIVVGGGHAGTEAALAAARMGCKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M D +GIQFR LN KGPAVR R QADR LY+ + + Q NL + Q Sbjct: 63 IDALGGAMAIATDFSGIQFRTLNSSKGPAVRATRAQADRALYKAKILNILQHQPNLRIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E + V Q VVLT GTFL G IHIG GR GD P+ + Sbjct: 123 QAVDDLVVENGRVIGAVTQMGLAFEAPAVVLTAGTFLGGKIHIGLENYSGGRAGDQPAIA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIEC 240 L + GRLKTGTP R+D +TI + +Q D L SF+ D + QI C Sbjct: 183 LAHRLRDLPLRVGRLKTGTPPRIDARTIDFSVMTEQKGDTPLPVMSFIGDLSQHPEQISC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH II + S +YSG I+ GPRYCPSIEDKI RF ++N HQIF+EPEGL Sbjct: 243 YITHTNEQTHDIIRGGLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKNSHQIFIEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T +YPNGIST+LP ++Q Q +R+I G+E+ I+RPGYAIEYDY +P++L +LETK I Sbjct: 303 TTTEIYPNGISTSLPFDVQIQLVRSIRGMEQAEIVRPGYAIEYDYFDPRDLKNSLETKVI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQINGTTGYEEA AQGL+AG+N+A + + R +Y+GV++DDL++ G Sbjct: 363 DGLFFAGQINGTTGYEEAGAQGLLAGLNAALQVQGKEAWAPRRDQAYLGVLVDDLSTLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT G +LG + + R ++F++ + + L+ Sbjct: 423 KEPYRMFTSRAEYRLLLREDNADLRLTEKGRELGLVDDFRWQKFSEKRESIELEQQRLRG 482 Query: 481 LVLTSKNLSSTSISF---KQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 + + ++ + + + L P+ L + L E++ Sbjct: 483 QWVHVNSPQVAELNEVLSAPLTREASLEDLLRRPEIEYDTLMKVDGFGPGLADPLAAEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 QI+ YA Y RQ E + + E +P D DYS +P LSNE+ KL+ KP + QAS Sbjct: 543 QIQVKYAGYIQRQQDEIAKAERNENTRLPLDLDYSEVPGLSNEVTAKLNAHKPETIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA+++LL+++KK + Sbjct: 603 RISGVTPAAVSILLVHLKKRGL 624 >gi|329767567|ref|ZP_08259088.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Gemella haemolysans M341] gi|328839194|gb|EGF88778.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Gemella haemolysans M341] Length = 627 Score = 793 bits (2049), Expect = 0.0, Method: Composition-based stats. Identities = 271/624 (43%), Positives = 381/624 (61%), Gaps = 7/624 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIGGGHAG EAA +++ G T +IT TIG M CNP++GG KG +VRE+D Sbjct: 6 KEYDVIVIGGGHAGIEAAHASSRKGVKTLMITINLDTIGFMPCNPSVGGPAKGIVVREVD 65 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL GLMGRVAD IQ ++LN KGPAVR R Q+D+ Y+L M+R + NLD+ Q Sbjct: 66 ALGGLMGRVADKTNIQSKMLNTAKGPAVRALRMQSDKVEYQLEMKRILEDTPNLDIEQAM 125 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E N + + + + T+++TTGT+LRG I IG +K +G PS L Sbjct: 126 VRELIIEDNKVVGLRTMLGTAYKAKTIIITTGTYLRGEIVIGDIKYSSGPNHQMPSIDLA 185 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + FD R KTGTP R++ ++ + KT Q DE FS+ T + Q+ C +T Sbjct: 186 KQLEELGFDLVRFKTGTPPRVNADSVDFSKTAIQPGDEEEHAFSYETKEFVKDQVPCWLT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG NT Sbjct: 246 YTNSTTHEIIDKNLGRSAMYSGVIKGTGPRYCPSIEDKYVRFNDKERHQLFLEPEGRNTK 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G+ST+LP+++Q + +I GLE I+R GYAIEYD +NP L+PTLETK I GL Sbjct: 306 EIYVQGLSTSLPDDVQRDMVHSIAGLENAVIMRNGYAIEYDAVNPTTLWPTLETKLIDGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGT+GYEEAA QG++AGIN+A K + + R ++YIGV+IDDL +KG EP Sbjct: 366 FTAGQINGTSGYEEAAGQGIMAGINAACKVLGEEPMILGRDEAYIGVLIDDLVTKGTNEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAE+R+ LR DNAD RLT G + + R +F + + LK+ + Sbjct: 426 YRLLTSRAEHRLLLRHDNADMRLTEKAYNYGLVTKERYNKFCEKRKMVADEIERLKTFRI 485 Query: 484 TS-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 T + L+ + + +DG A + L P+ S N+ + D V+E+++I Sbjct: 486 TPTAATLEKLAELNSAEIRDGI--LAIDMLRRPELSHANVLYLANDDTVLPKDVVEQVEI 543 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E Y Y + + + +++K + IP D +Y +P+L+ E +EKL + P + QAS+I Sbjct: 544 EVKYEGYIKKSLQQVEKLKKMNEMKIPTDLNYDEVPSLALEAREKLKKVLPLTIGQASRI 603 Query: 599 EGMTPAALNLLLIYIKKNTVKLNE 622 G+ PA +++LL+Y+++ NE Sbjct: 604 SGVNPADISILLVYLEQRRGTNNE 627 >gi|242243259|ref|ZP_04797704.1| glucose inhibited division protein A [Staphylococcus epidermidis W23144] gi|242233208|gb|EES35520.1| glucose inhibited division protein A [Staphylococcus epidermidis W23144] Length = 630 Score = 793 bits (2049), Expect = 0.0, Method: Composition-based stats. Identities = 278/622 (44%), Positives = 396/622 (63%), Gaps = 7/622 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDV+VIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VREID Sbjct: 8 QEYDVVVIGAGHAGIEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVREID 67 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R + +++NLD++QG Sbjct: 68 ALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVLENEDNLDIMQGM 127 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E N + + + R V++TTGTFLRG I +G LK +G PS +L Sbjct: 128 VDELIIEDNEVKGVRTNIGTEYRSKAVIITTGTFLRGEIILGNLKYSSGPNHQLPSVTLA 187 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 ++ K FD R KTGTP R++ +TI + KTE Q D+ FSF T + Q+ C +T Sbjct: 188 DNLRKLGFDIVRFKTGTPPRVNARTIDYSKTEIQPGDDIGRAFSFETTEFILDQLPCWLT 247 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG NT+ Sbjct: 248 YTNGDTHQVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRNTN 307 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETK I L Sbjct: 308 EVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKAIKNL 367 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGT+GYEEAA QG++AGIN+A SR+D+YIGV+IDDL +KG EP Sbjct: 368 YTAGQINGTSGYEEAAGQGIMAGINAAGNVLGTGEKILSRSDAYIGVLIDDLVTKGTNEP 427 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G +LG I E R +F + Q+ L + + Sbjct: 428 YRLLTSRAEYRLLLRHDNADLRLTDMGYELGLISEERYAKFNEKRQQIKDEIQRLTDVRI 487 Query: 484 TSKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 + + S +DG A + L P+ + + + I ++ + V E+++I Sbjct: 488 KPNEHTQAIIEAKGGSRLKDGI--LAIDLLRRPEMNYETILEILEESHQLPEAVEEQVEI 545 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 ++ Y Y + + + +++K E + IP+D DYS + +L++E +EKL+ +KP N+ QAS+I Sbjct: 546 QTKYEGYINKSLQQVEKVKRMEAKKIPEDLDYSKVDSLASEAREKLAEVKPLNIAQASRI 605 Query: 599 EGMTPAALNLLLIYIKKNTVKL 620 G+ PA +++LL+Y+++ ++ Sbjct: 606 SGVNPADISILLVYLEQGKLQR 627 >gi|251811360|ref|ZP_04825833.1| glucose inhibited division protein A [Staphylococcus epidermidis BCM-HMP0060] gi|251805109|gb|EES57766.1| glucose inhibited division protein A [Staphylococcus epidermidis BCM-HMP0060] Length = 630 Score = 793 bits (2048), Expect = 0.0, Method: Composition-based stats. Identities = 279/622 (44%), Positives = 396/622 (63%), Gaps = 7/622 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDV+VIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VREID Sbjct: 8 QEYDVVVIGAGHAGIEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVREID 67 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R + +++NLD++QG Sbjct: 68 ALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVLENEDNLDIMQGM 127 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E N + + + R V++TTGTFLRG I +G LK +G PS +L Sbjct: 128 VDELIIEDNEVKGVRTNIGTEYRSKAVIITTGTFLRGEIILGNLKYSSGPNHQLPSVTLA 187 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 ++ K FD R KTGTP R++ +TI + KTE Q D+ FSF T + Q+ C +T Sbjct: 188 DNLRKLGFDIVRFKTGTPPRVNARTIDYSKTEIQPGDDIGRAFSFETTEFILDQLPCWLT 247 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG NT+ Sbjct: 248 YTNGDTHQVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRNTN 307 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETK I L Sbjct: 308 EVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKAIKNL 367 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGT+GYEEAA QG++AGIN+A SR+D+YIGV+IDDL +KG EP Sbjct: 368 YTAGQINGTSGYEEAAGQGIMAGINAAGNVLGTGEKILSRSDAYIGVLIDDLVTKGTNEP 427 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLT +G +LG I E R RF + Q+ L + + Sbjct: 428 YRLLTSRAEYRLLLRHDNADLRLTDMGYELGLISEERYARFNEKRQQIKDEIQRLTDVRI 487 Query: 484 TSKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 + + S +DG A + L P+ + + + I ++ + V E+++I Sbjct: 488 KPNEHTQAIIEAKGGSRLKDGI--LAIDLLRRPEMNYETILEILEESHQLPEAVEEQVEI 545 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 ++ Y Y + + + +++K E + IP+D DYS + +L++E +EKL+ +KP N+ QAS+I Sbjct: 546 QTKYEGYINKSLQQVEKVKRMEAKKIPEDLDYSKVESLASEAREKLAEVKPLNIAQASRI 605 Query: 599 EGMTPAALNLLLIYIKKNTVKL 620 G+ PA +++LL+Y+++ ++ Sbjct: 606 SGVNPADISILLVYLEQGKLQR 627 >gi|307943443|ref|ZP_07658787.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Roseibium sp. TrichSKD4] gi|307773073|gb|EFO32290.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Roseibium sp. TrichSKD4] Length = 625 Score = 793 bits (2048), Expect = 0.0, Method: Composition-based stats. Identities = 363/614 (59%), Positives = 463/614 (75%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 ++ S+DVIVIGGGHAGCEAAA +A++GA TAL+THK TIG MSCNPAIGGLGKGHLVRE Sbjct: 4 VDLSFDVIVIGGGHAGCEAAAASARVGAKTALVTHKFETIGVMSCNPAIGGLGKGHLVRE 63 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDALDGLMGRVAD AGIQFR+LN +KGPAVRGPRTQADR+LYR AMQ EI + ENL V++ Sbjct: 64 IDALDGLMGRVADKAGIQFRMLNRRKGPAVRGPRTQADRKLYRDAMQAEIAALENLSVVE 123 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G+ F ++ + +++ D + +VVLT+GTFLRG+IHIG KIPAGR G++P+ Sbjct: 124 GQANRFLFDEGKVVGLLLSDGRKVEAKSVVLTSGTFLRGLIHIGDQKIPAGRSGEAPALG 183 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L S + FD GRLKTGTPARLDG+TI W+K + Q ADE +PFS +T+KIT QIEC Sbjct: 184 LSESLEEIGFDLGRLKTGTPARLDGRTIKWEKLDAQLADENPVPFSTLTEKITTPQIECH 243 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 ITRT ETHRII EN+ SA+YSG+IK GPRYCPSIEDKIVRFG+R+GHQIFLEPEGL+ Sbjct: 244 ITRTTPETHRIIRENLSRSAMYSGEIKGRGPRYCPSIEDKIVRFGDRDGHQIFLEPEGLD 303 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 VYPNGIST+LPE+ Q F+RTIPGLE+V + +PGYAIEYD+++P+EL PTLE + S Sbjct: 304 DHTVYPNGISTSLPEDAQLAFLRTIPGLEEVEVFQPGYAIEYDHVDPRELNPTLEARICS 363 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLFLAGQINGTTGYEEA AQGLVAG+N+ K+ ++ R++ YIGVMIDDL ++G+ Sbjct: 364 GLFLAGQINGTTGYEEAGAQGLVAGLNAGLKAQGMEPFTVDRSEGYIGVMIDDLVTRGIT 423 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+SLR DNAD RLTP+GMK+GCI E R+ F ++ + LLK L Sbjct: 424 EPYRMFTSRAEYRLSLRADNADQRLTPLGMKIGCISEARRVAFETKMKSLTEVADLLKRL 483 Query: 482 VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +T + QDG R+A++ LSYPD S + L S+ P+ ++E++ ++ Sbjct: 484 TITPAEAQRKGLPVNQDGIRRSAFDLLSYPDMSFEQLASVWPELEDIDPSIVEQVSSDAL 543 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ + +K +E IP DFD+++L LSNE+K+KL ++P L QAS+++G+ Sbjct: 544 YAVYLERQAADIAALKKDEALAIPADFDFNALTGLSNEVKQKLEAVRPATLGQASRMDGI 603 Query: 602 TPAALNLLLIYIKK 615 TPAAL L+L ++K+ Sbjct: 604 TPAALTLILSHLKR 617 >gi|308071638|ref|YP_003873243.1| glucose inhibited division protein A [Paenibacillus polymyxa E681] gi|305860917|gb|ADM72705.1| Glucose inhibited division protein A [Paenibacillus polymyxa E681] Length = 629 Score = 793 bits (2048), Expect = 0.0, Method: Composition-based stats. Identities = 274/618 (44%), Positives = 382/618 (61%), Gaps = 6/618 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDVIV+G GHAG E+A AA++G T +IT + M CNP+IGG KGH+VREIDA Sbjct: 7 DYDVIVVGAGHAGVESALAAARMGCRTLMITINLDMVAFMPCNPSIGGPAKGHVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAV R QAD+ Y+ AM+ + + NL + QG V Sbjct: 67 LGGEMGRNIDKTFIQMRMLNTGKGPAVHALRAQADKFSYQHAMKETMEKEPNLTLRQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ + + R VVLTTGT+LRG I +G+L +G PS L Sbjct: 127 EELIMEDGHCVGVITKTGTEYRSKAVVLTTGTYLRGKIIMGELMYESGPNNQQPSLRLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R+ TI + KTE Q D++ FS+ T N Q+ C +T Sbjct: 187 HLRELGFDLVRFKTGTPPRVHKDTIDFSKTEIQPGDDQPKFFSYETKSSDNEQLPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T++ETH+II +N+ + ++SG I+ GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSVETHQIINDNLHRAPMFSGLIEGTGPRYCPSIEDKVVRFSDKPKHQIFLEPEGKNTSE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 Y G+ST+LPE++Q +R+IPG+EKV ++R GYAIEYD + P +L+PTLETKK+ GLF Sbjct: 307 YYVQGLSTSLPEDVQLAVLRSIPGMEKVEMMRNGYAIEYDAMVPTQLWPTLETKKVPGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QG++AGIN+ARK + + R+ YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGIMAGINAARKVQGKEPVVLDRSQGYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLTPIG +G I + R +RF Q+ L+ + Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTPIGHDIGLITDERYERFLDKKQKVEQEIERLRLAKVR 486 Query: 485 SKNLSST----SISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 +++ + QDG L P+ S + I P + E+++I+ Sbjct: 487 PVDINEMLQQGGSAPIQDGSN--LLTVLRRPEISYAQVAQISPSPIALTEEEQEQVEIQI 544 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 YA Y +Q++ + ++ EK+ +P+D YS + L+ E K+KL ++P ++ QAS+I G Sbjct: 545 KYAGYIEKQLMHVERLQKMEKKKLPEDIVYSEVQGLAIEAKQKLEKIRPMSIGQASRISG 604 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPA +++LL+Y++ Sbjct: 605 VTPADISILLVYLEHYNR 622 >gi|330685268|gb|EGG96929.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus epidermidis VCU121] Length = 625 Score = 793 bits (2048), Expect = 0.0, Method: Composition-based stats. Identities = 276/622 (44%), Positives = 394/622 (63%), Gaps = 3/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + + YDVIVIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VRE Sbjct: 1 MVQEYDVIVIGAGHAGIEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+ I ++NLD++Q Sbjct: 61 IDALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKNVIEDEDNLDIMQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G V E + + + + R VV+TTGTFLRG I +G +K +G PS + Sbjct: 121 GMVDELIIEDDEVKGVRTNIGTEYRSKAVVITTGTFLRGEIILGNMKYSSGPNHQLPSVT 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L ++ F+ R KTGTP R++ KTI + KTE Q D+ FS+ T + Q+ C Sbjct: 181 LADNLRGLGFEVVRFKTGTPPRVNSKTIDYSKTEIQPGDDVGRAFSYETTEYILDQLPCW 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN +TH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG N Sbjct: 241 LTYTNDKTHQVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRN 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETK I Sbjct: 301 TNEVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKMIK 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 L+ AGQINGT+GYEEAA QG++AGIN+A K + SR+D+YIGV+IDDL +KG Sbjct: 361 NLYTAGQINGTSGYEEAAGQGIMAGINAAGKVLGKEEKILSRSDAYIGVLIDDLVTKGTN 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAEYR+ LR DNAD RLT +G +LG I + R +F Q+ L + Sbjct: 421 EPYRLLTSRAEYRLLLRHDNADLRLTDLGHELGLISDERYAQFNHKRQQIKDEIQRLTDI 480 Query: 482 VLTSKNLSSTSISFKQDGKT---RTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 + + + + I K A + L P+ + + I + + S V E+++I Sbjct: 481 RIKPNDHTQSVIEANGGSKLKDGILAIDLLRRPEMTYDTILEILEEDHQLPSEVEEQVEI 540 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 ++ Y Y + + + +++K E++ IP+D DYS + +L++E +EKL+ +KP N+ QAS+I Sbjct: 541 QTKYEGYINKSLQKVEKVKRMEQKKIPEDLDYSKVDSLASEAREKLAEVKPLNIAQASRI 600 Query: 599 EGMTPAALNLLLIYIKKNTVKL 620 G+ PA +++LL+Y+++ ++ Sbjct: 601 SGVNPADISILLVYLEQGKLQR 622 >gi|330812746|ref|YP_004357208.1| glucose inhibited division protein A [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380854|gb|AEA72204.1| putative glucose inhibited division protein A [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 632 Score = 792 bits (2047), Expect = 0.0, Method: Composition-based stats. Identities = 289/619 (46%), Positives = 386/619 (62%), Gaps = 7/619 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 ++VIVIGGGHAG EAA +A++GA T L+TH T+G+MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FEVIVIGGGHAGTEAALASARMGAKTLLLTHNVETLGAMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAVREILENQPNLWIFQQAAD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E++ + +V Q +VVLTTGTFL G+IHIG GR GD PS +L + Sbjct: 127 DLIVEQDQVRGVVTQMGLRFFADSVVLTTGTFLGGLIHIGLQNFSGGRAGDPPSIALAHR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 + GRLKTGTP R+DGK++ + +Q D + SFM +K + RQ+ C IT Sbjct: 187 LRELPLRVGRLKTGTPPRIDGKSVDFSVMTEQPGDTPIPVMSFMGNKEQHPRQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSG--DIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 TN TH II N+ S +YS +I+ GPRYCPSIEDKI RF ++ HQ+F+EPEGL T Sbjct: 247 TNARTHEIIAANLDRSPMYSAAGEIEGVGPRYCPSIEDKIHRFADKESHQVFIEPEGLTT 306 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNGIST+LP ++Q Q +++I G+E +I+RPGYAIEYDY +P++L +LETK I G Sbjct: 307 HELYPNGISTSLPFDVQLQIVQSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETKAIGG 366 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEA AQGL+AG N+A + + C R ++YIGV++DDL + G E Sbjct: 367 LFFAGQINGTTGYEEAGAQGLLAGANAALLAKGKEAWCPRRDEAYIGVLVDDLITLGTQE 426 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT G +LG + + R F K + LKS Sbjct: 427 PYRMFTSRAEYRLILREDNADLRLTEKGRELGLVDDARWAAFCKKRESIELEEQRLKSTW 486 Query: 483 LTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + +I+ K LS P+ L + + V E+++I+ Sbjct: 487 VRPGTEQGDAIAAKFGTPLTHEYNLLNLLSRPEIDYAGLVEVTGQGAE-DPQVAEQVEIK 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + YA Y RQ E ++ E +P D DY+ + LS E++ KL +P L QAS+I Sbjct: 546 TKYAGYIDRQQDEIARLRASEDTKLPVDIDYTGISGLSKEIQSKLGATRPETLGQASRIP 605 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+TPAA++LL+I++KK Sbjct: 606 GVTPAAISLLMIHLKKRGA 624 >gi|311696581|gb|ADP99454.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [marine bacterium HP15] Length = 628 Score = 792 bits (2047), Expect = 0.0, Method: Composition-based stats. Identities = 287/615 (46%), Positives = 399/615 (64%), Gaps = 5/615 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G+ T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FDVIVIGGGHAGTEAALAAARMGSQTLLLTHNIETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D AGIQFRVLN +KGPAVR R QADR LY+ A++ + SQ NL + Q Sbjct: 67 GGAMAEATDKAGIQFRVLNSRKGPAVRATRAQADRVLYKAAIRHTLESQPNLTLFQQAAD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + ++ +V Q TVVLTTGTFL GVIHIG GR GD+P+N+L Sbjct: 127 DLIVENDQVTGVVTQTGIRFNARTVVLTTGTFLGGVIHIGMQHHAGGRAGDAPANALAQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + F+ GRLKTGTP R+D +++ + ++Q+ D+ SF+ + + Q+ C +TR Sbjct: 187 LRELPFNVGRLKTGTPPRIDARSVDFSVMQEQWGDDPTPVMSFIGSRSQHPEQVCCYVTR 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T +TH II S +++G I+ GPRYCPSIEDK+ RF +++ HQIF+EPEGL T+ Sbjct: 247 TTEQTHDIIRSGFDRSPMFAGSIEGVGPRYCPSIEDKVNRFADKDSHQIFVEPEGLTTNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP +IQ +R+IPG E +I RPGYAIEYDY+NP++L TLETK I GL+ Sbjct: 307 LYPNGISTSLPFDIQLAAVRSIPGFENAHITRPGYAIEYDYLNPQDLRHTLETKFIQGLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AGIN+A +S + D R ++Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGINAALRSQEKDEWYPRRDEAYLGVLVDDLITMGTSEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G KLG + + R ++F + RS L++ + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTETGRKLGLVNDERWQKFNDKREAIATERSRLEATRIH 486 Query: 485 SKNLS---STSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 + + + + ++ E L P+ ++ I + + +V ++++IE Sbjct: 487 PNTEAGERANGFLKQPMTRDQSLAELLRRPEIVYSHIAEIGAEKAE-DPVVADQVEIEIK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y RQ E + ++ E +P D DY + LSNE+K+KL ++P + QAS+I+G+ Sbjct: 546 YEGYISRQTDEIERLRKNENTALPVDLDYDVIGGLSNEIKQKLKTVRPETVAQASRIQGV 605 Query: 602 TPAALNLLLIYIKKN 616 TPAA++ +L+++KK Sbjct: 606 TPAAVSQILVHLKKR 620 >gi|242372606|ref|ZP_04818180.1| glucose inhibited division protein A [Staphylococcus epidermidis M23864:W1] gi|242349661|gb|EES41262.1| glucose inhibited division protein A [Staphylococcus epidermidis M23864:W1] Length = 626 Score = 792 bits (2047), Expect = 0.0, Method: Composition-based stats. Identities = 281/624 (45%), Positives = 396/624 (63%), Gaps = 7/624 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + + YDVIVIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VRE Sbjct: 1 MVQEYDVIVIGAGHAGIEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R I ++NLD++Q Sbjct: 61 IDALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEDNLDIMQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G V E N + + + R VV+TTGTFLRG I +G +K +G PS + Sbjct: 121 GMVDELIIEDNEVKGVRTNIGTEYRAKAVVITTGTFLRGEIILGNMKYSSGPNHQLPSIT 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L ++ + FD R KTGTP R++ KTI + KTE Q D+ FS+ T + Q+ C Sbjct: 181 LADNLRELGFDVVRFKTGTPPRVNAKTIDYSKTEIQPGDDVGRAFSYETTEYILDQLPCW 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN ETH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG N Sbjct: 241 LTYTNGETHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRN 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETK I Sbjct: 301 TNEVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKAIK 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 L+ AGQINGT+GYEEAA QG++AGIN+A SR+D+YIGV+IDDL +KG Sbjct: 361 NLYTAGQINGTSGYEEAAGQGIMAGINAAGNVLGTGEKILSRSDAYIGVLIDDLVTKGTN 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAEYR+ LR DNAD RLT +G +LG I E R RF + ++ L + Sbjct: 421 EPYRLLTSRAEYRLLLRHDNADLRLTDVGYELGMISEERYARFNEKRKQIQDEIQRLTDI 480 Query: 482 VLTSKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 + + + S S +DG A + L P+ + + I + + V E++ Sbjct: 481 RIKPNDHTQSVIESKGGSRLKDGI--LAIDLLRRPEMTYDTILEILEEEHRLPEAVEEQV 538 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I++ Y Y + + + +++K E++ IP+D DYS + +L++E +EKL+ +KP N+ QAS Sbjct: 539 EIQTKYEGYINKSLQQVEKVKRMEEKKIPEDLDYSKVDSLASEAREKLAEVKPLNIAQAS 598 Query: 597 KIEGMTPAALNLLLIYIKKNTVKL 620 +I G+ PA +++LL+Y+++ ++ Sbjct: 599 RISGVNPADISILLVYLEQGKLQR 622 >gi|309780414|ref|ZP_07675164.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ralstonia sp. 5_7_47FAA] gi|308920807|gb|EFP66454.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ralstonia sp. 5_7_47FAA] Length = 649 Score = 792 bits (2047), Expect = 0.0, Method: Composition-based stats. Identities = 286/632 (45%), Positives = 385/632 (60%), Gaps = 15/632 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNP+IGG+GKGHLV+E+DA Sbjct: 6 EFDVIVVGGGHAGTEAALAAARMGCQTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 66 LGGAMAIATDEGGIQFRILNSSKGPAVRATRAQADRVLYKAAIRHRLENQPNLMLFQQAV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + V Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 126 EDLLVEGDRVVGAVTQVGVQFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSA 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTD-KITNRQIECGI 242 + GRLKTGTP R+DG++I + E+Q D +P FSFM + RQ+ C + Sbjct: 186 RLKELKLPQGRLKTGTPPRIDGRSINFSVLEEQPGDLDPVPVFSFMGRADMHPRQVPCWV 245 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T Sbjct: 246 THTNERTHDIIRAGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLTT 305 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + YPNG+ST+LP ++Q I ++ GLE +I+RPGYAIEYDY +P+ L +LE+K ISG Sbjct: 306 NEFYPNGVSTSLPFDVQLDLIHSMRGLENAHILRPGYAIEYDYFDPRALKASLESKAISG 365 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AGIN+ + D R +Y+GV++DDL ++GV E Sbjct: 366 LFFAGQINGTTGYEEAAAQGLLAGINAGLQVQGKDAWTPRRDQAYLGVLVDDLITRGVTE 425 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAE+R+SLR DNAD RLT +G LG + + R F + + LKS Sbjct: 426 PYRMFTSRAEFRLSLREDNADMRLTEVGRALGVVDDARWDAFNRKRDAVSRETERLKSTW 485 Query: 483 LTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----------CPDARKFS 529 + L + + K + + L P+ + + L + + + Sbjct: 486 VNPATLPLEDAEPVLGKGIEREYALADLLRRPNVTYETLMGMQGGKYALESPLAEDPLLA 545 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 + E+++I Y Y RQ E + + E +P DFDYS + LS E+++KL+ KP Sbjct: 546 EQIREQVEIGIKYHGYIARQADEVERLGANENTRLPADFDYSQVRGLSIEVQQKLAKHKP 605 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKKNTVKLN 621 + QAS+I G+TPAA++LLL+++KK ++ Sbjct: 606 ETIGQASRISGITPAAVSLLLVHLKKGVLRGQ 637 >gi|91785986|ref|YP_546938.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Polaromonas sp. JS666] gi|123165597|sp|Q12HF2|MNMG_POLSJ RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|91695211|gb|ABE42040.1| glucose inhibited division protein A [Polaromonas sp. JS666] Length = 673 Score = 792 bits (2047), Expect = 0.0, Method: Composition-based stats. Identities = 290/650 (44%), Positives = 388/650 (59%), Gaps = 32/650 (4%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DVIV+GGGHAG EAA +A++G T L++H T+G MSCNP+IGG+GKGHLV+E+D Sbjct: 9 QEFDVIVVGGGHAGTEAALASARMGCKTLLLSHNIETLGQMSCNPSIGGIGKGHLVKEVD 68 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 A+ G M D GIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q Sbjct: 69 AMGGAMALATDEGGIQFRILNSSKGPAVRATRAQADRILYKAAIRRRLENQPNLWLFQQA 128 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + + V Q R TVVLT GTFL G IH+G AGR GD P+ SL Sbjct: 129 VDDLMVEGDRVVGAVTQVGIRFRSRTVVLTAGTFLDGKIHVGLNNYAAGRAGDPPAVSLS 188 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFAD-------ERLIPFSFMTDKITNR 236 + + GRLKTGTP R+DG+TI + K +Q D + FSFM I + Sbjct: 189 SRLKELKLPQGRLKTGTPPRIDGRTIDFSKCIEQPGDGMPGGTAGPVPVFSFMGGAIPHP 248 Query: 237 -QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFL 295 Q+ C IT TN TH II S +++G I GPRYCPS+EDKI RF ++ HQIFL Sbjct: 249 QQMPCWITHTNERTHEIIRSGFDRSPMFTGKIDGVGPRYCPSVEDKINRFADKESHQIFL 308 Query: 296 EPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTL 355 EPEGL T +YPNGIST+LP +IQ++ +R++ G+E +I+RPGYAIEYDY +P+ L T Sbjct: 309 EPEGLTTHEIYPNGISTSLPFDIQYELVRSMAGMENAHILRPGYAIEYDYFDPRALKTTF 368 Query: 356 ETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSN--------KLDCICFSRTDSY 407 ET+ I GLF AGQINGTTGYEEAAAQG+ AGIN+A + R ++Y Sbjct: 369 ETRAIGGLFFAGQINGTTGYEEAAAQGMFAGINAALQCRALGGLPNDHGGAWLPRRDEAY 428 Query: 408 IGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKY 467 +GV++DDL +KGV EPYRMFTSRAEYR+ LR DNAD RLT G +LG + + R F++ Sbjct: 429 LGVLVDDLITKGVTEPYRMFTSRAEYRLMLREDNADMRLTEKGRELGLVDDARWDAFSRK 488 Query: 468 IQEYNFLRSLLKSLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI--- 521 + L+SL + NL + + K + + L PD + L S+ Sbjct: 489 RDAVSRETERLRSLWVNPHNLPLAEAERVLGKSIEREYNLLDLLRRPDVNYAGLMSLEEG 548 Query: 522 ---CPDAR-------KFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYS 571 P+ + VIE+++I + YA Y Q E + E +P D DY Sbjct: 549 KYANPELAAEAAASDDLAKSVIEQIEITAKYAGYIDLQKTEVERAAHYENLKLPTDLDYL 608 Query: 572 SLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVKLN 621 + ALS E ++ L+ +P L AS+I G+TPA ++LLL+++KKN K Sbjct: 609 QVSALSFEARQTLARHRPETLGMASRISGITPATVSLLLVHLKKNLWKNT 658 >gi|296134493|ref|YP_003641740.1| glucose inhibited division protein A [Thermincola sp. JR] gi|296033071|gb|ADG83839.1| glucose inhibited division protein A [Thermincola potens JR] Length = 634 Score = 792 bits (2047), Expect = 0.0, Method: Composition-based stats. Identities = 275/619 (44%), Positives = 385/619 (62%), Gaps = 3/619 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIVIG GHAGCEAA AA+LG T +T + M CNPA+GG KGHLVREIDA Sbjct: 7 TYDVIVIGTGHAGCEAALAAARLGCKTLAVTLNMDNVAFMPCNPAVGGPAKGHLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG D IQ R+LN KGPAV R QAD++LY+L M++ + + NLDV Q V Sbjct: 67 LGGQMGINTDKTHIQMRMLNTGKGPAVHALRAQADKKLYQLEMKKTLELEPNLDVKQALV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + N ++ +V ++ + V++T+GTFLR I IG + G G P+ L Sbjct: 127 EKIILQGNRVTGVVTNTGAIFQARAVIITSGTFLRARIIIGDVNYSGGPSGQFPAQKLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S + + GR KTGTPAR+ K++ + K Q D+ FSF+ K+ QI C +T Sbjct: 187 SLKELGLELGRFKTGTPARVHRKSVDFSKMIIQPGDDYPHTFSFIMPKMKREQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T +TH+II+ N+ S +Y+G I+ GPRYCPSIEDK+VRF ++ HQIFLEPEG +T+ Sbjct: 247 TTEDTHKIILANLHRSPLYTGKIEGTGPRYCPSIEDKVVRFADKPCHQIFLEPEGKDTEE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G ST+LPE+IQ Q +RTI GLEKV ++RPGYAIEYDY+ P +L TLETK I GL+ Sbjct: 307 MYVQGFSTSLPEDIQIQMLRTIIGLEKVEMMRPGYAIEYDYVVPTQLKLTLETKNIEGLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAAAQGLVAGIN+A K +++ R+++YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAAQGLVAGINAALKIKEMEPFILKRSEAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT G K+G + E R + F + S L + ++ Sbjct: 427 RIMTSRAEYRLLLRHDNADLRLTEKGYKIGLVDENRYRIFVQKRDAIEKEISRLANENIS 486 Query: 485 SKNLSS---TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 + S+ + + +A+E L P+ + L + V E+++I+ Sbjct: 487 PSEETQRVINSVGSTELKQKISAFELLKRPEITYSVLEQLGAGIADLDEEVKEQVEIQVK 546 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y +QM + + E + IP+ +Y + LS E K+KLS ++P ++ QA +I G+ Sbjct: 547 YEGYIKKQMAQVERFVKMEAKTIPEWVEYEKIQGLSTEAKQKLSSIRPASIGQAGRISGV 606 Query: 602 TPAALNLLLIYIKKNTVKL 620 +PA +++L++YI++ K Sbjct: 607 SPADISVLMVYIEQQRRKR 625 >gi|262273123|ref|ZP_06050940.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Grimontia hollisae CIP 101886] gi|262222879|gb|EEY74187.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Grimontia hollisae CIP 101886] Length = 629 Score = 792 bits (2047), Expect = 0.0, Method: Composition-based stats. Identities = 284/626 (45%), Positives = 394/626 (62%), Gaps = 10/626 (1%) Query: 1 MINR-SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLV 59 M + ++DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV Sbjct: 1 MFYQDNFDVIVVGGGHAGTEAALAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLV 60 Query: 60 REIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDV 119 +E+DAL GLM R D GIQFR LN KGPAVR R QADR LY+ A++ + +Q NL + Sbjct: 61 KEVDALGGLMARAIDKGGIQFRTLNASKGPAVRATRAQADRALYKAAVREALENQPNLML 120 Query: 120 IQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 Q V E++ ++ +V + R VVLT GTFL G IHIG GR GD PS Sbjct: 121 FQQAVNDLIVEQDQVTGVVTEMGLKFRARAVVLTVGTFLGGKIHIGLENYAGGRAGDPPS 180 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQI 238 +L + + F RLKTGTP R+D +T+ + + Q D+ FSFM + RQ+ Sbjct: 181 IALADRLRELPFRVDRLKTGTPPRIDARTVDFSVMQTQHGDDPCPVFSFMGKVSDHPRQV 240 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C IT TN +TH +I +N+ S +Y+G I+ GPRYCPSIEDK++RF +++ HQIF+EPE Sbjct: 241 PCYITYTNEQTHDVIRKNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKDKHQIFVEPE 300 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL T+ +YPNGIST+LP ++Q IR+I G E +IRPGYAIEYD+ +P++L T ETK Sbjct: 301 GLTTNELYPNGISTSLPFDVQMGIIRSIKGFENARVIRPGYAIEYDFFDPRDLKQTFETK 360 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I GLF AGQINGTTGYEEAAAQGL+AG N+A + + C R +Y+GV+IDDL++ Sbjct: 361 FIKGLFFAGQINGTTGYEEAAAQGLLAGANAALFAQDKEGWCPRRDQAYMGVLIDDLSTM 420 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYRMFTSRAEYR+ LR DNAD RLT +G +LG + + R RF + ++ L Sbjct: 421 GTKEPYRMFTSRAEYRLLLREDNADLRLTEMGRELGLVDDERWARFNQKLENMEQETQRL 480 Query: 479 KSLVLTSKNLSSTSISF---KQDGKTRTAYEFLSYPDFSIQNLFS---ICPDARKFSSLV 532 +S + + + +++ + + L P+ + +L + P Sbjct: 481 RSTWIHPASEHADALNAILKTPLSREANGEDLLRRPEVTYNDLVANPVFAPAHEDL--QA 538 Query: 533 IERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNL 592 E+++I+ YA Y RQ E ++ E +P D DY+ + LSNE+ KL +P + Sbjct: 539 SEQVEIQIKYAGYINRQKEEIEKYIRHENTRLPIDLDYTQIKGLSNEVVAKLRDARPETI 598 Query: 593 LQASKIEGMTPAALNLLLIYIKKNTV 618 +AS+I G+TPAA+++LL+++KK + Sbjct: 599 GKASRISGITPAAISILLVHLKKQGM 624 >gi|73663752|ref|YP_302533.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|123641434|sp|Q49UI5|MNMG_STAS1 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|72496267|dbj|BAE19588.1| glucose inhibited division protein A [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 625 Score = 792 bits (2046), Expect = 0.0, Method: Composition-based stats. Identities = 280/624 (44%), Positives = 398/624 (63%), Gaps = 7/624 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + + YDVIVIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VRE Sbjct: 1 MAQEYDVIVIGAGHAGIEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M + D IQ R+LN KGPAVR R QAD+ LY+ M++ I + NLD++Q Sbjct: 61 IDALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKKVIEDEANLDIMQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G V E ++I + + V++TTGTFLRG I +G +K +G PS S Sbjct: 121 GMVDDLIIEDDVIKGVRTNIGTEYWSEAVIITTGTFLRGEIILGNMKYSSGPNHQLPSIS 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L ++ F+ R KTGTP R++ KTI + KTE Q D+ FSF T + Q+ C Sbjct: 181 LADNLRGLGFEVVRFKTGTPPRVNAKTIDYSKTEIQPGDDVGRAFSFETTEYILDQLPCW 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN +TH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG N Sbjct: 241 LTYTNGDTHQVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRN 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD + P +L+PTLETKKI Sbjct: 301 TNEVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDALVPTQLWPTLETKKIK 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 L+ AGQINGT+GYEEAA QG++AGIN+A + D + SR+D+YIGV+IDDL +KG Sbjct: 361 NLYTAGQINGTSGYEEAAGQGIMAGINAAARVQGKDEVILSRSDAYIGVLIDDLITKGTN 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAEYR+ LR DNAD RLT +G +LG I E R RF + + L + Sbjct: 421 EPYRLLTSRAEYRLLLRHDNADLRLTDLGYELGMISEERYARFNEKRAMIKAEQERLNGI 480 Query: 482 VLTSKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 + + + + S +DG A E L P+ + + I ++ + S V E++ Sbjct: 481 RVKPNDRVQEIIEAQGGSRLKDGI--LALELLRRPEMTYDLILEILDESHQLPSDVEEQV 538 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I++ Y Y + + + +++K E++ IP+D DYS + +L+ E +EKL+ +KP N+ QAS Sbjct: 539 EIQTKYEGYINKSLQQVEKVKRMEEKKIPEDLDYSKVDSLATEAREKLAEVKPLNIAQAS 598 Query: 597 KIEGMTPAALNLLLIYIKKNTVKL 620 +I G+ PA +++LL+Y+++ ++ Sbjct: 599 RISGVNPADISILLVYLEQGKIQR 622 >gi|239637282|ref|ZP_04678269.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus warneri L37603] gi|239597119|gb|EEQ79629.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus warneri L37603] Length = 625 Score = 792 bits (2046), Expect = 0.0, Method: Composition-based stats. Identities = 276/622 (44%), Positives = 393/622 (63%), Gaps = 3/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + + YDVIVIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VRE Sbjct: 1 MVQEYDVIVIGAGHAGIEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+ I ++NLD++Q Sbjct: 61 IDALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKNVIEDEDNLDIMQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G V E + + + + R VV+TTGTFLRG I +G +K +G PS + Sbjct: 121 GMVDELIIEDDEVKGVRTNIGTEYRSKAVVITTGTFLRGEIILGNMKYSSGPNHQLPSVT 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L ++ F+ R KTGTP R++ KTI + KTE Q D+ FS+ T + Q+ C Sbjct: 181 LADNLRGLGFEVVRFKTGTPPRVNSKTIDYSKTEIQPGDDVGRAFSYETTEYILEQLPCW 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN +TH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG N Sbjct: 241 LTYTNDKTHQVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRN 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETK I Sbjct: 301 TNEVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKMIK 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 L+ AGQINGT+GYEEAA QG++AGIN+A K + SR+D+YIGV+IDDL +KG Sbjct: 361 NLYTAGQINGTSGYEEAAGQGIMAGINAAGKVLGKEEKILSRSDAYIGVLIDDLVTKGTN 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAEYR+ LR DNAD RLT +G +LG I R +F Q+ L + Sbjct: 421 EPYRLLTSRAEYRLLLRHDNADLRLTDLGHELGLISNERYAQFNHKRQQIKDEIQRLTDI 480 Query: 482 VLTSKNLSSTSISFKQDGKT---RTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 + + + + I K A + L P+ + + I + + S V E+++I Sbjct: 481 RIKPNDHTQSVIEANGGSKLKDGILAIDLLRRPEMTYDTILEILEEDHQLPSEVEEQVEI 540 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 ++ Y Y + + + +++K E++ IP+D DYS + +L++E +EKL+ +KP N+ QAS+I Sbjct: 541 QTKYEGYINKSLQQVEKVKRMEQKKIPEDLDYSKVDSLASEAREKLAEVKPLNIAQASRI 600 Query: 599 EGMTPAALNLLLIYIKKNTVKL 620 G+ PA +++LL+Y+++ ++ Sbjct: 601 SGVNPADISILLVYLEQGKLQR 622 >gi|237749326|ref|ZP_04579806.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Oxalobacter formigenes OXCC13] gi|229380688|gb|EEO30779.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Oxalobacter formigenes OXCC13] Length = 639 Score = 792 bits (2046), Expect = 0.0, Method: Composition-based stats. Identities = 286/630 (45%), Positives = 398/630 (63%), Gaps = 12/630 (1%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + +DVIV+GGGHAG EAA V+A++G T L+TH T+G +SCNP+IGG+GK HLV+ Sbjct: 2 LYSVQFDVIVVGGGHAGTEAALVSARMGMKTLLVTHNFETLGQLSCNPSIGGIGKSHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ G+M D AGIQFR+LN KGPAVR R Q DR +YR ++ ++ +Q+NL + Sbjct: 62 EVDAMGGVMALATDKAGIQFRILNSSKGPAVRATRAQIDRVIYRQIIRYQLENQKNLLLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q +V E + + Q R ++VVLT GTF+ G I +G P GR GD P+ Sbjct: 122 QQQVDDLILEGEKVVGVKTQGGVEFRGTSVVLTAGTFIDGKIFVGLNSYPGGRAGDVPAL 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDK-ITNRQI 238 +L +S + + GRLKTGTP R+DG TI + +KQ D +P FS + + Q+ Sbjct: 182 ALSHSLKELNLPQGRLKTGTPPRIDGNTIDFSVMKKQLGDLDPVPVFSLRGNASMHPEQL 241 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C IT TN +TH II + S +++G I+ GPRYCPSIEDKI RF ++N HQIFLEPE Sbjct: 242 PCWITHTNTKTHDIIRAGLDKSPLFTGVIEGVGPRYCPSIEDKIHRFSDKNSHQIFLEPE 301 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 G+ T+ YPNGIST+L E Q +RTIPGLE +I+RPGYAIEYD+ +P+ L +LET+ Sbjct: 302 GVKTNEYYPNGISTSLSFETQIDLVRTIPGLENAHILRPGYAIEYDFYDPRCLKSSLETR 361 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 +I GLF AGQINGTTGYEEAAAQGL+AGIN++ + + R+++Y+GVM+DDL ++ Sbjct: 362 QIKGLFFAGQINGTTGYEEAAAQGLLAGINASLYVQEKEPWVPKRSEAYMGVMVDDLITQ 421 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 GV EPYRMFTSRAEYR+SLR DNAD RLT G KLGC+ + F + ++ + Sbjct: 422 GVQEPYRMFTSRAEYRLSLREDNADIRLTEAGYKLGCVPLEQWIDFEQKREKIAREIERM 481 Query: 479 KSLVLTSKNLSSTSIS---FKQDGKTRTAYEFLSYPDFSIQNLFSI-------CPDARKF 528 KS + L+S K+ + + + + PD L S+ + Sbjct: 482 KSTWVHPSMLNSEEAERVIGKEIEREYSLADLMKRPDVDYDKLASLTSIEGKNWAAEEEL 541 Query: 529 SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILK 588 V E+++I+ YA Y RQ E + ++ E +P+ Y+ + ALS E+++KL K Sbjct: 542 DEKVKEQVEIQIKYAGYIERQTREVRRQQYYENLRLPQSMSYAEVSALSIEVRQKLDKQK 601 Query: 589 PFNLLQASKIEGMTPAALNLLLIYIKKNTV 618 P L QAS+I G+TPAA++LLLIY+KK + Sbjct: 602 PETLGQASRISGVTPAAISLLLIYLKKQGL 631 >gi|319944931|ref|ZP_08019193.1| glucose inhibited division protein A [Lautropia mirabilis ATCC 51599] gi|319741501|gb|EFV93926.1| glucose inhibited division protein A [Lautropia mirabilis ATCC 51599] Length = 680 Score = 792 bits (2046), Expect = 0.0, Method: Composition-based stats. Identities = 286/647 (44%), Positives = 399/647 (61%), Gaps = 30/647 (4%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EA+ VAA+ GA T L++H T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 8 FDVIVVGGGHAGTEASLVAARTGAKTLLLSHNLDTLGQMSCNPSIGGIGKGHLVKEVDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+M D AGIQFR+LN KGPAVR R QADR LYR A+++ + +Q N+ + Q V Sbjct: 68 GGVMAVATDHAGIQFRILNASKGPAVRATRAQADRVLYRQAIRQALENQPNMTLFQQAVD 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + ++ Q R VVLT GTFL G +H+G AGR D + +L Sbjct: 128 DLLLEGDRVVGVITQLGIQFRAKAVVLTAGTFLNGKVHVGLDNYEAGRAADPSAKTLAAR 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQIECGIT 243 + GRLKTGTP R+DGKTI + + Q D +P FSF+ + RQ+ C IT Sbjct: 188 LRELALPQGRLKTGTPPRIDGKTIDYSRLGIQPGDLDPVPVFSFIGCADQHPRQLPCWIT 247 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + + S +++G I+ GPRYCPSIEDKI RF +++ HQI+LEPEGL T Sbjct: 248 HTNARTHEIIRQALDRSPLFTGVIEGVGPRYCPSIEDKIHRFADKDSHQIYLEPEGLQTH 307 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP + Q + ++ GLEK +I+RPGYAIEYDY +P+ L P LET++I GL Sbjct: 308 EIYPNGISTSLPFDTQLAVVHSMVGLEKAHILRPGYAIEYDYFDPRGLKPGLETRQIQGL 367 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+AR+ + R +Y+GVM+DDL ++GV EP Sbjct: 368 FFAGQINGTTGYEEAAAQGLLAGLNAARQVQGKEPWVPRRDQAYMGVMLDDLLTQGVQEP 427 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+SLR DNAD RLT +G ++GC+ + R + F + + +++ + Sbjct: 428 YRMFTSRAEYRLSLREDNADLRLTELGRQMGCVDDVRWQAFTSKQEAIEREIAHMRATLA 487 Query: 484 TSKNLSSTSIS-------------------------FKQDGKTRTAYEFLSYPDFSIQNL 518 + L+ + + ++ L PD S+ L Sbjct: 488 NPQVLARLQTPQGTTQAAEEAQGASPSAPQAPAAPQGQNGTSKHSLHDLLKRPDVSLAQL 547 Query: 519 FSICPD---ARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPA 575 S+ P+ + V E+++I+ Y Y RQ +E + + +E IP D DY+ + Sbjct: 548 ASLMPEEFAEVQADPRVAEQVEIQIKYQGYIDRQKLEVQRMAQQEATPIPADLDYTQISG 607 Query: 576 LSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVKLNE 622 LSNE+++KL +P + QA +I GMTPAA++LLL+++KK + Sbjct: 608 LSNEVRQKLIAQRPQTIGQAGRIPGMTPAAVSLLLVHLKKRRKVASA 654 >gi|310644870|ref|YP_003949629.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmg [Paenibacillus polymyxa SC2] gi|309249821|gb|ADO59388.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Paenibacillus polymyxa SC2] Length = 629 Score = 792 bits (2046), Expect = 0.0, Method: Composition-based stats. Identities = 274/618 (44%), Positives = 381/618 (61%), Gaps = 6/618 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDVI++G GHAG E+A AA++G T +IT + M CNP+IGG KGH+VREIDA Sbjct: 7 DYDVIIVGAGHAGVESALAAARMGCRTLMITINLDMVAFMPCNPSIGGPAKGHVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAV R QAD+ Y+ AM+ + + NL + QG V Sbjct: 67 LGGEMGRNIDKTFIQMRMLNTGKGPAVHALRAQADKFSYQHAMKETMEKEPNLTLRQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ + + R VVLTTGT+LRG I +G+L +G PS L Sbjct: 127 EELIIEDGKCVGVITKTGTEYRSKAVVLTTGTYLRGKIIMGELMYESGPNNQQPSLRLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + FD R KTGTP R+ TI + KTE Q D++ FS+ T N Q+ C +T Sbjct: 187 HLRELGFDLVRFKTGTPPRVHKDTIDFSKTEIQPGDDQPKFFSYETKSSDNEQLPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T++ETH+II +N+ + ++SG I+ GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 247 TSVETHQIINDNLHRAPMFSGLIEGTGPRYCPSIEDKVVRFSDKPKHQIFLEPEGKNTSE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 Y G+ST+LPE++Q +RTIPG+EKV ++R GYAIEYD + P +L+PTLETKK+ GLF Sbjct: 307 YYVQGLSTSLPEDVQLAVLRTIPGMEKVEMMRNGYAIEYDAMVPTQLWPTLETKKVPGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QG++AGIN+ARK + + R+ YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGIMAGINAARKVQGKEPVVLDRSQGYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLTPIG +G I + R +RF Q+ L+ + Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTPIGHDIGLITDERYERFLDKKQKVEQEIERLRLAKVR 486 Query: 485 S----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + L + QDG L P+ S + I P + E+++I+ Sbjct: 487 PVDVNEMLEQGGSAPIQDGSN--LLTVLRRPEISYAQVAQISPSPVALTEEEQEQVEIQI 544 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 YA Y +Q++ + ++ EK+ +P+D Y+ + L+ E K+KL ++P ++ QAS+I G Sbjct: 545 KYAGYIEKQLMHVERLQKMEKKKLPEDIAYNEVQGLAIEAKQKLEKIRPMSIGQASRISG 604 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPA +++LL+Y++ Sbjct: 605 VTPADISILLVYLEHYNR 622 >gi|327438168|dbj|BAK14533.1| NAD/FAD-utilizing enzyme apparently [Solibacillus silvestris StLB046] Length = 631 Score = 792 bits (2046), Expect = 0.0, Method: Composition-based stats. Identities = 275/619 (44%), Positives = 389/619 (62%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+G GHAG E+A AAK+GA T ++T I M CNP++GG KG +VREIDA Sbjct: 9 NFDVIVVGAGHAGVESAYAAAKMGAKTLMLTINLDMIAFMPCNPSVGGPAKGIVVREIDA 68 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLMGR+ D IQ R+LN KGPAVR R QAD+ Y+ M+R + +ENL + Q V Sbjct: 69 LGGLMGRIIDKTHIQMRMLNTGKGPAVRALRAQADKFQYQHEMKRVLEEEENLQIHQAMV 128 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ Q ++ R V++TTGTFLRG I +G LK +G PS L + Sbjct: 129 DELIVEDGEVKGVITQVGAIYRAPAVIITTGTFLRGEIILGNLKYSSGPNNQQPSIKLAD 188 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + + FD R KTGTP R++ +TI + KTE Q D+ FSF T + Q+ C +T Sbjct: 189 NLKELGFDLIRFKTGTPPRVNNRTIDYSKTEIQPGDDVPRAFSFETTEYIMDQLPCWLTY 248 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETHR I EN+ S ++SG IK GPRYCPSIEDK+ RF ++ HQIFLEPEG NT Sbjct: 249 TTEETHRTIEENLHLSPMFSGMIKGTGPRYCPSIEDKVTRFNDKPRHQIFLEPEGRNTRE 308 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE +Q + I +IPGLE ++R GYAIEYD + P +L+PTLETKKI GL+ Sbjct: 309 VYVQGLSTSLPEHVQKKLIASIPGLENAEMMRAGYAIEYDSVIPTQLWPTLETKKIQGLY 368 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AG+N+A K + I R+D+YIGV+IDDL +KG EPY Sbjct: 369 TAGQINGTSGYEEAAGQGLMAGMNAAAKVLGREEIILDRSDAYIGVLIDDLVTKGTNEPY 428 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT IG K G I E R +F + + L+ +++ Sbjct: 429 RLLTSRAEYRLLLRHDNADLRLTEIGYKAGMITEERYVKFQHKKAQIEQEIARLREIIIK 488 Query: 485 SKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + + +DG + L + + + S+ P + S V E+++I+ Sbjct: 489 PNATTQEVIRNAGGAELKDGIR--GADLLKRTEMTYDLVASLTPSEIELSDDVKEQIEIQ 546 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + +++K E + IP++ DY ++P+L+ E + KL ++P ++ QAS+I Sbjct: 547 LKYEGYIQKALQQVEKMKKLEDKKIPENIDYDAIPSLATEARMKLKSVQPLSIAQASRIS 606 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 607 GVNPADVSILLVYIEQGKI 625 >gi|258512902|ref|YP_003186336.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257479628|gb|ACV59947.1| glucose inhibited division protein A [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 628 Score = 792 bits (2046), Expect = 0.0, Method: Composition-based stats. Identities = 275/619 (44%), Positives = 381/619 (61%), Gaps = 3/619 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIGGGHAGCEAA AA++G T L+T TI M CNP+IGG KG +VRE+DA Sbjct: 7 SYDVIVIGGGHAGCEAALAAARMGCKTLLLTINLDTIAYMPCNPSIGGPAKGIVVREVDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ DA IQ R+LN KGPAV+ R QAD+ Y L M+ + ENL + QG V Sbjct: 67 LGGQMGKNTDATYIQMRMLNTGKGPAVQALRAQADKAYYALNMKWTLERTENLHLKQGLV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 I +V + VVLTTGT+LRG I+IG++ +G G P+ L + Sbjct: 127 EELLVRNGRIYGVVTKSGQEFHAQAVVLTTGTYLRGRIYIGEVSYESGPNGQMPAIRLSD 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F R KTGTP R++ +I + K Q D FSF D Q+ C +T Sbjct: 187 CLVDLGFRLVRFKTGTPPRINKNSIDFSKLIAQPGDPVPRHFSFDPDTPVRDQVPCWLTG 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETHRII+EN+ S +YSG+IK GPRYCPSIEDK+VRF +R+ HQIFLEPEG +T Sbjct: 247 TTEETHRIILENLHRSPLYSGEIKGTGPRYCPSIEDKVVRFHDRDTHQIFLEPEGPHTCE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 Y G+ST+LPE++Q + + +IPGLE+ ++RPGYAIEYD + P +L+PTLETK + GLF Sbjct: 307 WYVQGLSTSLPEDVQLKILHSIPGLERAEMLRPGYAIEYDAVVPTQLWPTLETKLVEGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ+NGT+GYEEAA QG++AGIN+ARK + + SR+D+YIGVMIDDL +KG EPY Sbjct: 367 TAGQLNGTSGYEEAAGQGIMAGINAARKVKGEEPVVLSRSDAYIGVMIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAE+R+ LR DNAD RLT +G ++G + ER R + + + L + + Sbjct: 427 RLLTSRAEHRLLLRHDNADLRLTELGYRIGLVSERAYSRVMRKKEGIQAELARLSRVKVK 486 Query: 485 SKNLS--STSISFKQDGKTRTAYEFLSYPDFSIQNLFSICP-DARKFSSLVIERLQIESS 541 + ++ + + + L P+ S + +I P + V E+++IE Sbjct: 487 PQEVNGRLAEWGSQPIESGMSLAQLLKRPELSYDQIRTIDPTGGVEIDPEVREQVEIEIK 546 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y +Q + K E R +P++ DY + L+ E +EKLS ++P + QA++I G+ Sbjct: 547 YAGYIRKQNELIERQKRLEGRKLPENLDYMQIKGLAMEAREKLSRVRPRTVGQAARIPGV 606 Query: 602 TPAALNLLLIYIKKNTVKL 620 TPA +++LL+Y+ + Sbjct: 607 TPADISILLVYLDAQERRA 625 >gi|220933187|ref|YP_002510095.1| glucose inhibited division protein A [Halothermothrix orenii H 168] gi|219994497|gb|ACL71100.1| glucose inhibited division protein A [Halothermothrix orenii H 168] Length = 628 Score = 792 bits (2045), Expect = 0.0, Method: Composition-based stats. Identities = 272/621 (43%), Positives = 380/621 (61%), Gaps = 4/621 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIG GHAG EA+ A++G +T + M CNP++GG GK H+VREID Sbjct: 6 KEYDVIVIGAGHAGSEASLAPARMGFKVLTMTVDLDHVAFMPCNPSLGGPGKSHIVREID 65 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M R D IQ R+LN KGPAVRG R QAD++ Y L M+R + + N+D+ Q Sbjct: 66 ALGGEMARNMDETMIQIRMLNTSKGPAVRGLRGQADKKQYHLRMKRVLEREPNVDLKQEI 125 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 E I ++ + + R V++TTGTFL+G I IG+ AG P+N L Sbjct: 126 AEKLVIEDGEIKGVITKTGILYRAKKVIVTTGTFLKGKIIIGEATFNAGPNQQYPANKLS 185 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 S K F R KTGTP R++ ++ + K ++Q D+ L FSF++ T Q+ C +T Sbjct: 186 ESLKKAGFKLRRFKTGTPPRVNKNSLDFSKMKEQTGDKGLT-FSFVSPPFTREQVSCWLT 244 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 T ETHRII EN + ++SGDI+ GPRYCPSIEDK+VRF ++ HQIFLEPEG TD Sbjct: 245 YTTDETHRIIQENKHRTPLFSGDIEGVGPRYCPSIEDKVVRFPHKDRHQIFLEPEGEFTD 304 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 Y G+S++LPE++Q +R+IPG+EK I+RP YAIEYD I+P +L TLE K I GL Sbjct: 305 EYYVAGLSSSLPEDVQIDLVRSIPGMEKAEIMRPAYAIEYDCIDPTQLKLTLEAKHIKGL 364 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 ++AGQINGT+GYEEAA QGL+AGIN++ D + R+++YIGV+ID+L +KG EP Sbjct: 365 YMAGQINGTSGYEEAAGQGLIAGINASLSLQGKDPLILKRSEAYIGVLIDELVTKGTNEP 424 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAEYR+ LR DNAD RLTP G ++G I E R K+F K + + L+S + Sbjct: 425 YRIMTSRAEYRLILRQDNADQRLTPKGYEIGLISEERYKKFRKKVDKIEEALEFLRSNQI 484 Query: 484 TSKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + + G K T + L P ++L D ++ +IE++ I+ Sbjct: 485 SPTPEVRERLKELNSGDLSKPVTLEQLLRRPQLEYRDLKYFVDDLPEYPDDIIEQVSIQV 544 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQM + ++ K E +LIP D DY L L E +EKL +KP +L QAS+I G Sbjct: 545 KYKGYIDRQMSQIEQFKKMEDKLIPDDIDYQELENLRLEAREKLDKIKPRSLGQASRISG 604 Query: 601 MTPAALNLLLIYIKKNTVKLN 621 ++PA +++L++Y+++ + Sbjct: 605 VSPADISVLMVYLEQRQRRKQ 625 >gi|168218050|ref|ZP_02643675.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium perfringens NCTC 8239] gi|182379932|gb|EDT77411.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium perfringens NCTC 8239] Length = 630 Score = 792 bits (2045), Expect = 0.0, Method: Composition-based stats. Identities = 267/616 (43%), Positives = 388/616 (62%), Gaps = 3/616 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYD++VIG GHAGCEA AA++G T + T ++ M CNP IGG KGHLVREIDA Sbjct: 7 SYDIVVIGAGHAGCEAGLAAARMGCKTLVCTLTLDSVAMMPCNPNIGGTAKGHLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG D IQ ++LN KGPAV R QAD++ Y+ M++ + +QENL + Q EV Sbjct: 67 LGGEMGVNIDHTFIQSKMLNTSKGPAVHSLRAQADKKKYQERMKKVLETQENLHLRQLEV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ ++ + C V++T+GT+L+ I IG + G G S +N L Sbjct: 127 VSVEVEDGKVKGVLTKNGAFFECKAVIMTSGTYLQSRIIIGDVSYSQGPNGLSNANELSK 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S + D R KTGTPAR++ +++ + K +Q DE +IPFSF++ I Q+ C +T Sbjct: 187 SLIDLGIDLRRFKTGTPARINKRSVDFSKMIEQPGDEEIIPFSFISGNIDRDQVSCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN ETH++I ENI S +Y+G IK GPRYCPSIEDK++RF +++ HQIF+EPEG +T+ Sbjct: 247 TNEETHKVIQENIHRSPMYNGSIKGVGPRYCPSIEDKVMRFQDKDRHQIFIEPEGDDTEE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+S++LPE++Q Q I+T+PGLE I+R YAIEYD I+P +L +LE K I G F Sbjct: 307 MYVGGMSSSLPEDVQVQMIKTVPGLENAEIMRTAYAIEYDCIDPTQLKASLEFKNIDGFF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQING++GYEEA AQG+VAGIN+A K D + +R+D Y+GV+IDDL +KG EPY Sbjct: 367 SAGQINGSSGYEEAGAQGIVAGINAALKVQGKDPMILTRSDGYVGVLIDDLITKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSRAEYR+ LR DNAD RLT IG +G + E R +F + Q LK L +T Sbjct: 427 RMMTSRAEYRLLLRQDNADFRLTEIGYNVGLVTEERWNKFQERKQNLERELERLKELQIT 486 Query: 485 SKNLSSTSI---SFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +K ++ I + K YE + P+ +L + P+ + +++ I + Sbjct: 487 NKTENNEKIVELGSTELKKPIRMYELIKRPELDYFSLACLDPERPDLPKDIGDQINIIAR 546 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y Q+ + + K EK+++P+D DY+ + +L E +KL+ ++P N+ QAS+I G+ Sbjct: 547 YEGYIQTQLEQVAQFKKFEKKVLPEDLDYNDVNSLRIEAIQKLNKIRPLNIGQASRISGV 606 Query: 602 TPAALNLLLIYIKKNT 617 +PA +++LLI+++ Sbjct: 607 SPADISVLLIFLEHYR 622 >gi|188587518|ref|YP_001919063.1| glucose inhibited division protein A [Natranaerobius thermophilus JW/NM-WN-LF] gi|205831540|sp|B2A469|MNMG_NATTJ RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|179352205|gb|ACB86475.1| glucose inhibited division protein A [Natranaerobius thermophilus JW/NM-WN-LF] Length = 644 Score = 792 bits (2045), Expect = 0.0, Method: Composition-based stats. Identities = 275/620 (44%), Positives = 391/620 (63%), Gaps = 3/620 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YD+IV+G GHAGCEAA A++GA T L+T I M CNPAIGG K H+VRE+DA Sbjct: 7 NYDLIVVGAGHAGCEAALAGARIGAKTLLLTLNLDQIALMPCNPAIGGPAKSHIVREVDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQFR+LN +KGPAV+ R QAD+ Y+ M+ + ++ENL + Q V Sbjct: 67 LGGEMGKNIDDTAIQFRMLNTRKGPAVQALRAQADKIKYQERMKYILENEENLLLKQETV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E N I +V +D + C +V+T+GT+L+G I +G + G G + L Sbjct: 127 NQLMIEDNQIKGVVTKDGTYYYCEQLVITSGTYLKGRIIVGDVDYSGGPNGQQAAYGLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 F + R KTGTPAR+ K++ +D+ E Q D+ FSF +Q+ C +T Sbjct: 187 DFKQHGISLMRFKTGTPARVYRKSLNFDEMEIQHGDDYPWRFSFYHSSERLKQLPCYLTF 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN ETH+II +++ S +YSG I+ GPRYCPSIEDKIVRF +++ HQ+FLEPEGLNT Sbjct: 247 TNYETHKIINDSLSRSPLYSGRIEGTGPRYCPSIEDKIVRFPDKSRHQLFLEPEGLNTQE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 Y G+ST+LP ++Q + +RTIPGLE+V I+RPGYAIEYD I+P +L TLE K+ISGLF Sbjct: 307 YYVQGMSTSLPLDVQERMLRTIPGLEEVEIMRPGYAIEYDCIDPTQLELTLEHKQISGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QG++AGIN+A+K + + R+ YIGV+IDDL +KG EPY Sbjct: 367 FAGQINGTSGYEEAAGQGILAGINAAQKIQGKEPVIIKRSQGYIGVLIDDLVTKGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSRAEYR+ LR DNAD RLT +G ++G I E ++F + +++ + LKS+ LT Sbjct: 427 RMLTSRAEYRLILRQDNADLRLTELGYQVGLIKEGNYQKFKEKLEKIESEKERLKSIKLT 486 Query: 485 S-KNLSSTSISFKQDG--KTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 KN+ + G K T + L P+ S + L V E+++I+ Sbjct: 487 PNKNVQNFMEEHNTSGLKKPTTLFHILKRPEISYEALEYFDETRPDLPLEVTEQIEIQIK 546 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y +Q+ + + + E RLIP D DYS + LS E +EKL +P ++ QA++I G+ Sbjct: 547 YEGYIDKQVEQVQRFEKLEARLIPDDIDYSQISGLSIEAREKLQTYRPRSVGQANRISGI 606 Query: 602 TPAALNLLLIYIKKNTVKLN 621 P+ +++L++Y+++ + + Sbjct: 607 DPSDISVLMVYLEQLKQRAD 626 >gi|168207743|ref|ZP_02633748.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium perfringens E str. JGS1987] gi|170660925|gb|EDT13608.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium perfringens E str. JGS1987] Length = 630 Score = 792 bits (2045), Expect = 0.0, Method: Composition-based stats. Identities = 270/623 (43%), Positives = 392/623 (62%), Gaps = 5/623 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYD++VIG GHAGCEA AA++G T + T ++ M CNP IGG KGHLVREIDA Sbjct: 7 SYDIVVIGAGHAGCEAGLAAARMGCKTLVCTLTLDSVAMMPCNPNIGGTAKGHLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG D IQ ++LN KGPAV R QAD++ Y+ M++ + +QENL + Q EV Sbjct: 67 LGGEMGVNIDHTFIQSKMLNTSKGPAVHSLRAQADKKKYQERMKKVLETQENLHLRQLEV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ ++ + C V++T+GT+L+ I IG + G G S +N L Sbjct: 127 VSVEVEDGKVKGVLTKNGAFFECKAVIMTSGTYLQSRIIIGDVSYSQGPNGLSNANELSK 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S + D R KTGTPAR++ +++ + K +Q DE +IPFSF++ I Q+ C +T Sbjct: 187 SLIDLGIDLRRFKTGTPARINKRSVDFSKMIEQPGDEEIIPFSFISGNIDRDQVSCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN ETH++I ENI S +Y+G IK GPRYCPSIEDK++RF +++ HQIF+EPEG +T+ Sbjct: 247 TNEETHKVIQENIHRSPMYNGSIKGVGPRYCPSIEDKVMRFQDKDRHQIFIEPEGDDTEE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+S++LPE++Q Q I+T+PGLE I+R YAIEYD I+P +L +LE K I G F Sbjct: 307 MYVGGMSSSLPEDVQVQMIKTVPGLENAEIMRTAYAIEYDCIDPTQLKASLEFKNIDGFF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQING++GYEEA AQG+VAGIN+A K D + +R+D Y+GV+IDDL +KG EPY Sbjct: 367 SAGQINGSSGYEEAGAQGIVAGINAALKVQGKDPMILTRSDGYVGVLIDDLITKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSRAEYR+ LR DNAD RLT IG +G + E R +F + Q LK L +T Sbjct: 427 RMMTSRAEYRLLLRQDNADFRLTEIGHNVGLVTEERWNKFQERKQNLERELERLKELQIT 486 Query: 485 SKNLSSTSI---SFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +K ++ I + K YE + P+ +L + P+ + +++ I + Sbjct: 487 NKTENNEKIVELGSTELKKPIRMYELIKRPELDYFSLACLDPERPDLPKDIGDQINIIAR 546 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y Q+ + + K EK+++P+D DY+ + +L E +KL+ ++P N+ QAS+I G+ Sbjct: 547 YEGYIQTQLEQVAQFKKFEKKVLPEDLDYNDVNSLRIEAIQKLNKIRPLNIGQASRISGV 606 Query: 602 TPAALNLLLIYIK--KNTVKLNE 622 +PA +++LLI+++ + T K E Sbjct: 607 SPADISVLLIFLEHYRKTGKNTE 629 >gi|110801428|ref|YP_697345.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium perfringens ATCC 13124] gi|168211558|ref|ZP_02637183.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium perfringens B str. ATCC 3626] gi|169343452|ref|ZP_02864452.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium perfringens C str. JGS1495] gi|123148451|sp|Q0TLZ5|MNMG_CLOP1 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|110676075|gb|ABG85062.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium perfringens ATCC 13124] gi|169298404|gb|EDS80493.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium perfringens C str. JGS1495] gi|170710449|gb|EDT22631.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium perfringens B str. ATCC 3626] Length = 630 Score = 792 bits (2045), Expect = 0.0, Method: Composition-based stats. Identities = 267/616 (43%), Positives = 388/616 (62%), Gaps = 3/616 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYD++VIG GHAGCEA AA++G T + T ++ M CNP IGG KGHLVREIDA Sbjct: 7 SYDIVVIGAGHAGCEAGLAAARMGCKTLVCTLTLDSVAMMPCNPNIGGTAKGHLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG D IQ ++LN KGPAV R QAD++ Y+ M++ + +QENL + Q EV Sbjct: 67 LGGEMGVNIDHTFIQSKMLNTSKGPAVHSLRAQADKKKYQERMKKVLETQENLHLRQLEV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ ++ + C V++T+GT+L+ I IG + G G S +N L Sbjct: 127 VSVEVEDGKVKGVLTKNGAFFECKAVIMTSGTYLQSRIIIGDVSYSQGPNGLSNANELSK 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S + D R KTGTPAR++ +++ + K +Q DE +IPFSF++ I Q+ C +T Sbjct: 187 SLIDLGIDLRRFKTGTPARINKRSVDFSKMIEQPGDEEIIPFSFISGNIDRDQVSCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN ETH++I ENI S +Y+G IK GPRYCPSIEDK++RF +++ HQIF+EPEG +T+ Sbjct: 247 TNEETHKVIQENIHRSPMYNGSIKGVGPRYCPSIEDKVMRFQDKDRHQIFIEPEGDDTEE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+S++LPE++Q Q I+T+PGLE I+R YAIEYD I+P +L +LE K I G F Sbjct: 307 MYVGGMSSSLPEDVQVQMIKTVPGLENAEIMRTAYAIEYDCIDPTQLKASLEFKNIDGFF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQING++GYEEA AQG+VAGIN+A K D + +R+D Y+GV+IDDL +KG EPY Sbjct: 367 SAGQINGSSGYEEAGAQGIVAGINAALKVQGKDPMILTRSDGYVGVLIDDLITKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSRAEYR+ LR DNAD RLT IG +G + E R +F + Q LK L +T Sbjct: 427 RMMTSRAEYRLLLRQDNADFRLTEIGHNVGLVTEERWSKFQERKQNLERELERLKELQIT 486 Query: 485 SKNLSSTSI---SFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +K ++ I + K YE + P+ +L + P+ + +++ I + Sbjct: 487 NKTENNEKIVELGSTELKKPIRMYELIKRPELDYFSLACLDPERPDLPKDIGDQINIIAR 546 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y Q+ + + K EK+++P+D DY+ + +L E +KL+ ++P N+ QAS+I G+ Sbjct: 547 YEGYIQTQLEQVAQFKKFEKKVLPEDLDYNDVNSLRIEAIQKLNKIRPLNIGQASRISGV 606 Query: 602 TPAALNLLLIYIKKNT 617 +PA +++LLI+++ Sbjct: 607 SPADISVLLIFLEHYR 622 >gi|218291087|ref|ZP_03495110.1| glucose inhibited division protein A [Alicyclobacillus acidocaldarius LAA1] gi|218238972|gb|EED06179.1| glucose inhibited division protein A [Alicyclobacillus acidocaldarius LAA1] Length = 628 Score = 791 bits (2044), Expect = 0.0, Method: Composition-based stats. Identities = 275/619 (44%), Positives = 382/619 (61%), Gaps = 3/619 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIGGGHAGCEAA AA++G T L+T TI M CNP+IGG KG +VRE+DA Sbjct: 7 SYDVIVIGGGHAGCEAALAAARMGCRTLLLTINLDTIAYMPCNPSIGGPAKGIVVREVDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ DA IQ R+LN KGPAV+ R QAD+ Y L M+ + ENL + QG V Sbjct: 67 LGGQMGKNTDATYIQMRMLNTGKGPAVQALRAQADKAYYALNMKWTLERTENLHLKQGLV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 I +V + VVLTTGT+LRG I+IG++ +G G P+ L + Sbjct: 127 EELLVRNGRIYGVVTKSGQEFHAQAVVLTTGTYLRGRIYIGEVSYESGPNGQMPAIRLSD 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F R KTGTP R++ +I + K Q D FSF D Q+ C +T Sbjct: 187 CLVDLGFRLVRFKTGTPPRINKNSIDFSKLIAQPGDPVPRHFSFDPDTPVRDQVPCWLTG 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETHRII+EN+ S +YSG+IK GPRYCPSIEDK+VRF +R+ HQIFLEPEG +T Sbjct: 247 TTEETHRIILENLDRSPLYSGEIKGTGPRYCPSIEDKVVRFRDRDTHQIFLEPEGPHTCE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 Y G+ST+LPE++Q + + +IPGLE+ ++RPGYAIEYD + P +L+PTLETK + GLF Sbjct: 307 WYVQGLSTSLPEDVQLKILHSIPGLERAEMLRPGYAIEYDAVVPTQLWPTLETKLVEGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ+NGT+GYEEAA QG++AGIN+ARK + + SR+D+YIGVMIDDL +KG EPY Sbjct: 367 TAGQLNGTSGYEEAAGQGIMAGINAARKVKGEEPVVLSRSDAYIGVMIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAE+R+ LR DNAD RLT +G ++G + ER R + + + L + + Sbjct: 427 RLLTSRAEHRLLLRHDNADLRLTELGYRIGLVSERAYSRVMRKKEGIQAELARLSRVKVK 486 Query: 485 SKNLS--STSISFKQDGKTRTAYEFLSYPDFSIQNLFSICP-DARKFSSLVIERLQIESS 541 ++++ + + + + L P+ S + + P + V E+++IE Sbjct: 487 PQDVNGRLVELGSQPIESGMSLAQLLKRPELSYDQIRGLDPTGGVEIDPEVQEQVEIEIK 546 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y +Q + K E R +P++ DY L L+ E +EKLS ++P + QA++I G+ Sbjct: 547 YAGYIRKQNELIERQKRLEGRKLPENLDYMQLKGLAMEAREKLSRIRPRTVGQAARIPGV 606 Query: 602 TPAALNLLLIYIKKNTVKL 620 TPA +++LL+Y+ + Sbjct: 607 TPADISILLVYLDAQERRA 625 >gi|169830196|ref|YP_001700354.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Lysinibacillus sphaericus C3-41] gi|205831530|sp|B1HPM2|MNMG_LYSSC RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|168994684|gb|ACA42224.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA (Glucose-inhibited division protein A) [Lysinibacillus sphaericus C3-41] Length = 630 Score = 791 bits (2044), Expect = 0.0, Method: Composition-based stats. Identities = 279/619 (45%), Positives = 394/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIVIG GHAG EAA AAK+GA T ++T I M CNP+IGG KG +VREIDA Sbjct: 9 TFDVIVIGAGHAGSEAAHAAAKMGAKTLMLTINLDMIAFMPCNPSIGGPAKGIVVREIDA 68 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G+MG+V D IQ R+LN KGPAVR R QAD+ LY+ M+R + ENL + QG V Sbjct: 69 LGGVMGKVIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRILEETENLTIHQGMV 128 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ ++ Q ++ R TVV+TTGTFLRG I IG +K +G PS L + Sbjct: 129 EELIIEDGEVTGVITQIGAIYRAKTVVVTTGTFLRGEIIIGDIKYSSGPNNQQPSIRLAD 188 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + + FD R KTGTP R++ +TI +DKTE Q DE FSF T + Q+ C +T Sbjct: 189 NLKELGFDLVRFKTGTPPRVNNRTIDYDKTEIQPGDEVPRAFSFETTEFIMDQLPCWLTY 248 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETH II N+ S +YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 249 TSPETHEIIEANLHLSPMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTRE 308 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE +Q + +++IPGLE ++R GYAIEYD I P +L+PTLETK+I GL+ Sbjct: 309 VYVQGLSTSLPEHVQTRLLKSIPGLENAEMMRAGYAIEYDSIVPTQLWPTLETKRIKGLY 368 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAAAQGL+AG+N+A + + SR+D+YIGV+IDDL +KG EPY Sbjct: 369 TAGQINGTSGYEEAAAQGLMAGMNAAANVLGKEELILSRSDAYIGVLIDDLVTKGTNEPY 428 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RL + K+G + + R +F + L+ +++ Sbjct: 429 RLLTSRAEYRLLLRHDNADLRLLELAYKIGMVPQERYDKFNAKKALIENEIARLREIIIK 488 Query: 485 SKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + S S +DG + L P+ + + S+ P +F+ V E+++I+ Sbjct: 489 PNEATQAVIRSAGGSELKDGIR--GADLLKRPEMHYEMISSLIPADIEFTEEVKEQIEIQ 546 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + +++ +++ E + IP++ DY ++ L+ E ++KL + P ++ QAS+I Sbjct: 547 LKYEGYIEKALLQVEKLHKMENKKIPENIDYDAISGLATEARQKLKQVTPLSIAQASRIS 606 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 607 GVNPADISILLVYIEQGKI 625 >gi|116874161|ref|YP_850942.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria welshimeri serovar 6b str. SLCC5334] gi|123464237|sp|A0AMD1|MNMG_LISW6 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|116743039|emb|CAK22163.1| glucose-inhibited division protein A [Listeria welshimeri serovar 6b str. SLCC5334] Length = 629 Score = 791 bits (2044), Expect = 0.0, Method: Composition-based stats. Identities = 265/619 (42%), Positives = 374/619 (60%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+G GHAG EA + ++GA T ++T + M CNP++GG KG +VREIDA Sbjct: 8 TFDVIVVGAGHAGVEAGLASGRMGAKTLMLTINLDMVAFMPCNPSVGGPAKGVVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ M+ I +EN+ + QG V Sbjct: 68 LGGEMGRNTDKTYIQMRMLNTGKGPAVRALRAQADKWDYQHEMKHTIEKEENITLRQGLV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ ++ TVV+TTGTF RG I +G+L+ +G PS L Sbjct: 128 DHLVIEDGVCKGVITNSGAIYYAKTVVITTGTFSRGEIIVGELRYSSGPNNQQPSVKLSE 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F+ R KTGTP R+ TI + KTE+Q D+ FSF T + Q+ C +T Sbjct: 188 HLEELGFELRRFKTGTPPRVKSSTIDYSKTEEQPGDDHPRAFSFDTVDMMLDQLPCWLTY 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +++ K G RYCPSIEDKIVRF ++ HQIFLEPEG NT+ Sbjct: 248 TNETTHEIIQANLHRSPMFTATKKGTGARYCPSIEDKIVRFSDKPRHQIFLEPEGKNTEE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPEE+Q + +RTIPGLE V ++R GYAIEYD + P +L+P+LETK + GLF Sbjct: 308 VYVQGLSTSLPEEVQREMLRTIPGLENVEMMRVGYAIEYDAVMPDQLWPSLETKLVEGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+ARK + I R +YIGV+IDDL +KG EPY Sbjct: 368 TAGQINGTSGYEEAAGQGLMAGINAARKVFDKEPIILGRDQAYIGVLIDDLVTKGTEEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT IG ++G I + R +RF + L+ + Sbjct: 428 RLLTSRAEYRLLLRHDNADLRLTEIGHEIGLISDERYERFLAKQSAIEAEKERLQKTRIK 487 Query: 485 SKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 L +DG A + L P+ + + I + + E+++I+ Sbjct: 488 PTAEVQAMLKEIGSGELKDGI--LAADLLRRPEITYDKIAQIVSRETFITDEIAEQVEIQ 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + ++ +++K E + IP++ DY ++ L+ E EKL ++P ++ QAS+I Sbjct: 546 VKYEGYIQKSNLQVEKMKRMEDKKIPENIDYDAISGLATEALEKLKKIEPLSIAQASRIS 605 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 606 GVNPADISILLVYIEQGKI 624 >gi|302608314|emb|CBW44763.1| glucose-inhibited division protein, oxidoreductase-like with FAD/NAD(P)-binding domain [Marinobacter hydrocarbonoclasticus] Length = 628 Score = 791 bits (2044), Expect = 0.0, Method: Composition-based stats. Identities = 288/617 (46%), Positives = 403/617 (65%), Gaps = 5/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G+ T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FDVIVIGGGHAGTEAALAAARMGSQTLLLTHNIETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M R D AGIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMARATDQAGIQFRVLNSRKGPAVRATRAQADRILYKAAIRHMLENQPNLTLFQQAAD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + +V Q TVVLTTGTFL GVIHIG GR GD+P+N+L Sbjct: 127 DLIVENDQVVGVVTQTGIRFNAKTVVLTTGTFLGGVIHIGMQNHAGGRAGDAPANALAKR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + F+ GRLKTGTP R+D +T+ + ++Q+ D+ SF+ + + QI C +TR Sbjct: 187 LRELPFNVGRLKTGTPPRIDARTVDFSAMQQQWGDDPTPVMSFIGSRDEHPEQICCYVTR 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETH II S +++G+I+ GPRYCPSIEDK+ RF +++ HQIF+EPEGL T+ Sbjct: 247 TTEETHDIIRSGFDRSPMFAGNIEGVGPRYCPSIEDKVNRFADKDSHQIFVEPEGLTTNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP +IQ + +R+IPG E +I+RPGYAIEYDY+NP++L TLETK I GL+ Sbjct: 307 LYPNGISTSLPFDIQLKAVRSIPGFENAHILRPGYAIEYDYLNPQDLRHTLETKFIQGLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AGIN++ ++ + R ++Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGINASLRAQDKEEWYPRRDEAYLGVLVDDLITMGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G KLG + + R ++F++ + RS L+S + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTETGRKLGLVDDERWQKFSEKCEGIAKERSRLESTRIH 486 Query: 485 SKNLSSTSISF---KQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 + + + + ++ E L P+ ++ I + + V ++++IE Sbjct: 487 PNTEAGERANGYLKQPMTRDQSLAELLRRPEIVYDHIAEIGAERAE-DPNVADQVEIEIK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y RQ E + ++ E +P D DY + LSNE+K+KL ++P + QAS+I+G+ Sbjct: 546 YEGYISRQADEIERLRKNENTALPLDLDYDVIGGLSNEIKQKLKDVRPETVAQASRIQGV 605 Query: 602 TPAALNLLLIYIKKNTV 618 TPAA++ +L+++KK + Sbjct: 606 TPAAVSQILVHLKKRDL 622 >gi|241889411|ref|ZP_04776712.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Gemella haemolysans ATCC 10379] gi|241863954|gb|EER68335.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Gemella haemolysans ATCC 10379] Length = 627 Score = 791 bits (2044), Expect = 0.0, Method: Composition-based stats. Identities = 273/624 (43%), Positives = 380/624 (60%), Gaps = 7/624 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIGGGHAG EAA A++ G T +IT TIG M CNP++GG KG +VRE+D Sbjct: 6 KEYDVIVIGGGHAGIEAAHAASRKGVKTLMITINLDTIGFMPCNPSVGGPAKGIVVREVD 65 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL GLMGRVAD IQ ++LN KGPAVR R Q+D+ Y+L M+R + NLD+ Q Sbjct: 66 ALGGLMGRVADKTNIQSKMLNTAKGPAVRALRMQSDKVEYQLEMKRILEDTPNLDIEQAM 125 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E N + + + + T+++TTGT+LRG I IG +K +G PS L Sbjct: 126 VRELIIEDNKVVGLRTMLGTAYKAKTIIITTGTYLRGEIVIGDIKYSSGPNHQMPSIDLA 185 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + FD R KTGTP R++ ++ + KT Q D+ FS+ T + Q+ C +T Sbjct: 186 KQLEELGFDLVRFKTGTPPRVNADSVDFSKTAIQPGDDEEHAFSYETKEFVKDQVPCWLT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG NT Sbjct: 246 YTNTSTHEIIDKNLGRSAMYSGVIKGTGPRYCPSIEDKYVRFNDKERHQLFLEPEGRNTK 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G+ST+LP+++Q +R+I GLE I+R GYAIEYD +NP L+PTLETK I GL Sbjct: 306 EIYVQGLSTSLPDDVQRDMVRSIAGLENAVIMRNGYAIEYDAVNPTTLWPTLETKLIDGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGT+GYEEAA QG++AGIN+A K + + R ++YIGV+IDDL +KG EP Sbjct: 366 FTAGQINGTSGYEEAAGQGIMAGINAACKVLGEEPMILGRDEAYIGVLIDDLVTKGTNEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAE+R+ LR DNAD RLT G + E R F + LK+ + Sbjct: 426 YRLLTSRAEHRLLLRHDNADMRLTEKAYNYGLVTEERYNIFCEKRSMVADEIERLKTFRI 485 Query: 484 TS-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 T + L+ + + +DG A + L P+ S N+ + D V+E+++I Sbjct: 486 TPTAATLEKLAELNSAEIRDGI--LAIDMLRRPELSHANVLYLANDKTVLPKDVVEQVEI 543 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E Y Y + + + +++K + IP D +Y +P+L+ E +EKL + P + QAS+I Sbjct: 544 EVKYEGYIKKSIQQVEKLKKMNEMKIPTDLNYDDVPSLALEAREKLKKVLPLTIGQASRI 603 Query: 599 EGMTPAALNLLLIYIKKNTVKLNE 622 G+ PA +++LL+Y+++ NE Sbjct: 604 SGVNPADISILLVYLEQRRGMNNE 627 >gi|168214842|ref|ZP_02640467.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium perfringens CPE str. F4969] gi|182626428|ref|ZP_02954181.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium perfringens D str. JGS1721] gi|170713742|gb|EDT25924.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium perfringens CPE str. F4969] gi|177908302|gb|EDT70855.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium perfringens D str. JGS1721] Length = 630 Score = 791 bits (2044), Expect = 0.0, Method: Composition-based stats. Identities = 267/616 (43%), Positives = 388/616 (62%), Gaps = 3/616 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYD++VIG GHAGCEA AA++G T + T ++ M CNP IGG KGHLVREIDA Sbjct: 7 SYDIVVIGAGHAGCEAGLAAARMGCKTLVCTLTLDSVAMMPCNPNIGGTAKGHLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG D IQ ++LN KGPAV R QAD++ Y+ M++ + +QENL + Q EV Sbjct: 67 LGGEMGVNIDHTFIQSKMLNTSKGPAVHSLRAQADKKKYQERMKKVLETQENLHLRQLEV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ ++ + C V++T+GT+L+ I IG + G G S +N L Sbjct: 127 VSVEVEDGKVKGVLTKNGAFFECKAVIMTSGTYLQSRIIIGDVSYSQGPNGLSNANELSK 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S + D R KTGTPAR++ +++ + K +Q DE +IPFSF++ I Q+ C +T Sbjct: 187 SLIDLGIDLRRFKTGTPARINKRSVDFSKMIEQPGDEEIIPFSFISGNIDRDQVSCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN ETH++I ENI S +Y+G IK GPRYCPSIEDK++RF +++ HQIF+EPEG +T+ Sbjct: 247 TNEETHKVIQENIHRSPMYNGSIKGVGPRYCPSIEDKVMRFQDKDRHQIFIEPEGDDTEE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+S++LPE++Q Q I+T+PGLE I+R YAIEYD I+P +L +LE K I G F Sbjct: 307 MYVGGMSSSLPEDVQVQMIKTVPGLENAEIMRTAYAIEYDCIDPTQLKASLEFKNIDGFF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQING++GYEEA AQG+VAGIN+A K D + +R+D Y+GV+IDDL +KG EPY Sbjct: 367 SAGQINGSSGYEEAGAQGIVAGINAALKVQGKDPMILTRSDGYVGVLIDDLITKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSRAEYR+ LR DNAD RLT IG +G + E R +F + Q LK L +T Sbjct: 427 RMMTSRAEYRLLLRQDNADFRLTEIGHNVGLVTEERWNKFQERKQNLERELERLKELQIT 486 Query: 485 SKNLSSTSI---SFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +K ++ I + K YE + P+ +L + P+ + +++ I + Sbjct: 487 NKTENNEKIVELGSTELKKPIRMYELIKRPELDYFSLACLDPERPDLPKDIGDQINIIAR 546 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y Q+ + + K EK+++P+D DY+ + +L E +KL+ ++P N+ QAS+I G+ Sbjct: 547 YEGYIQTQLEQVAQFKKFEKKVLPEDLDYNDVNSLRIEAIQKLNKIRPLNIGQASRISGV 606 Query: 602 TPAALNLLLIYIKKNT 617 +PA +++LLI+++ Sbjct: 607 SPADISVLLIFLEHYR 622 >gi|238025741|ref|YP_002909972.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Burkholderia glumae BGR1] gi|237874935|gb|ACR27268.1| Glucose inhibited division protein A [Burkholderia glumae BGR1] Length = 656 Score = 791 bits (2044), Expect = 0.0, Method: Composition-based stats. Identities = 286/627 (45%), Positives = 384/627 (61%), Gaps = 15/627 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNP+IGG+GKGHLV+E+DA Sbjct: 6 EFDVIVVGGGHAGTEAALAAARMGVKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D AGIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 66 LGGAMAIATDEAGIQFRILNSSKGPAVRATRAQADRLLYKQAIRSRLENQPNLWLFQQAV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + V Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 126 DDLIVEGERVVGAVTQIGIRFRARAVVLTAGTFLDGKIHVGLNNHTGGRAGDPAAVSLSA 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQIECGI 242 + GRLKTGTP R+DG++I + K E+Q D +P FSF+ + RQ+ C + Sbjct: 186 RLKELKLPQGRLKTGTPPRIDGRSIDFSKLEEQPGDLDPVPVFSFLGRAEQHPRQLPCWV 245 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T Sbjct: 246 THTNERTHDIIRSGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLTT 305 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + YPNGIST+LP ++Q + ++ GLE +I+RPGYAIEYDY +P+ L +LETK I G Sbjct: 306 NEFYPNGISTSLPFDVQLDLVHSMRGLEHAHILRPGYAIEYDYFDPRGLKASLETKVIEG 365 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AGIN+ R + + C R +Y+GV++DDL ++GV E Sbjct: 366 LFFAGQINGTTGYEEAAAQGLLAGINAGRYAQDKEAWCPRRDQAYLGVLVDDLVTRGVSE 425 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+SLR DNAD RLT +G +LG + + R F++ + L++ Sbjct: 426 PYRMFTSRAEYRLSLREDNADMRLTEMGRELGVVDDVRWDAFSRKRDAVSRETERLRATW 485 Query: 483 LTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNL----------FSICPDARKFS 529 +T K L +T++ K + E L P S + D Sbjct: 486 VTPKTLAVEEATALLGKAIDHEYSLAELLRRPGVSYAGVCGLRGGECAPAEPLADDPVLL 545 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 + + E+++I Y Y RQ E + E +P DY+ + LS E ++KL+ +P Sbjct: 546 AQIEEQIEIGIKYQGYIERQAGEIERNGAHENTRLPDGIDYAEVRGLSFEARQKLNQHRP 605 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKKN 616 + QAS+I G+TPAA++LL++++K+ Sbjct: 606 ETIGQASRISGITPAAISLLMVHLKRG 632 >gi|110802913|ref|YP_699903.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium perfringens SM101] gi|123145822|sp|Q0SPQ4|MNMG_CLOPS RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|110683414|gb|ABG86784.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium perfringens SM101] Length = 630 Score = 791 bits (2044), Expect = 0.0, Method: Composition-based stats. Identities = 267/616 (43%), Positives = 388/616 (62%), Gaps = 3/616 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYD++VIG GHAGCEA AA++G T + T ++ M CNP IGG KGHLVREIDA Sbjct: 7 SYDIVVIGAGHAGCEAGLAAARMGCKTLVCTLTLDSVAMMPCNPNIGGTAKGHLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG D IQ ++LN KGPAV R QAD++ Y+ M++ + +QENL + Q EV Sbjct: 67 LGGEMGVNIDHTFIQSKMLNTSKGPAVHSLRAQADKKKYQERMKKVLETQENLHLRQLEV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ ++ + C V++T+GT+L+ I IG + G G S +N L Sbjct: 127 VSVEVEDGKVKGVLTKNGAFFECKAVIMTSGTYLQSRIIIGDVSYSQGPNGLSNANELSK 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S + D R KTGTPAR++ +++ + K +Q DE +IPFSF++ I Q+ C +T Sbjct: 187 SLIDLGIDLRRFKTGTPARVNKRSVDFSKMIEQPGDEEIIPFSFISGNIDRDQVSCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN ETH++I ENI S +Y+G IK GPRYCPSIEDK++RF +++ HQIF+EPEG +T+ Sbjct: 247 TNEETHKVIQENIHRSPMYNGSIKGVGPRYCPSIEDKVMRFQDKDRHQIFIEPEGDDTEE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+S++LPE++Q Q I+T+PGLE I+R YAIEYD I+P +L +LE K I G F Sbjct: 307 MYVGGMSSSLPEDVQVQMIKTVPGLENAEIMRTAYAIEYDCIDPTQLKASLEFKNIDGFF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQING++GYEEA AQG+VAGIN+A K D + +R+D Y+GV+IDDL +KG EPY Sbjct: 367 SAGQINGSSGYEEAGAQGIVAGINAALKVQGKDPMILTRSDGYVGVLIDDLITKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSRAEYR+ LR DNAD RLT IG +G + E R +F + Q LK L +T Sbjct: 427 RMMTSRAEYRLLLRQDNADFRLTEIGHNVGLVTEERWNKFQERKQNLERELERLKELQIT 486 Query: 485 SKNLSSTSI---SFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +K ++ I + K YE + P+ +L + P+ + +++ I + Sbjct: 487 NKTENNEKIVELGSTELKKPIRMYELIKRPELDYFSLACLDPERPDLPKDIGDQINIIAR 546 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y Q+ + + K EK+++P+D DY+ + +L E +KL+ ++P N+ QAS+I G+ Sbjct: 547 YEGYIQTQLEQVAQFKKFEKKVLPEDLDYNDVNSLRIEAIQKLNKIRPLNIGQASRISGV 606 Query: 602 TPAALNLLLIYIKKNT 617 +PA +++LLI+++ Sbjct: 607 SPADISVLLIFLEHYR 622 >gi|297585587|ref|YP_003701367.1| glucose inhibited division protein A [Bacillus selenitireducens MLS10] gi|297144044|gb|ADI00802.1| glucose inhibited division protein A [Bacillus selenitireducens MLS10] Length = 628 Score = 791 bits (2044), Expect = 0.0, Method: Composition-based stats. Identities = 262/621 (42%), Positives = 390/621 (62%), Gaps = 3/621 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +DVIV+G GHAG EA +A++GA+T ++T + M CNP++GG KG +VRE Sbjct: 4 FGGKFDVIVVGAGHAGVEAGLASARMGANTLMLTLNLDAVAFMPCNPSVGGPAKGIVVRE 63 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M R D IQ R+LN KGPAVR R QAD+ +Y+ M++ I +NL + Q Sbjct: 64 IDALGGEMARNIDKTHIQMRMLNTGKGPAVRALRAQADKFMYQHEMKKVIEDTDNLLLRQ 123 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G V E + + ++ Q + +V++TTGT+LRG + IG+L +G PS + Sbjct: 124 GMVEELIVEDDQVKGVITQTGARYEADSVIITTGTYLRGKVIIGELSYESGPNNMQPSVN 183 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L + + F+ R KTGTP R++G +I + +TE Q DE FS+ T Q+ C Sbjct: 184 LSHHMKELGFEMVRFKTGTPPRVNGHSIDYSQTEIQPGDEEPRAFSYETTAFITDQLPCW 243 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T T+ ETH +I N+ S +YSG I+ GPRYCPSIEDKIVRF ++ HQIFLEPEG N Sbjct: 244 LTYTSPETHELINANLHRSPMYSGMIEGTGPRYCPSIEDKIVRFNDKPRHQIFLEPEGRN 303 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T VY G+ST+LPE++QH+ ++T+PGLE V ++RPGYAIEYD I P +L+P+LETK+IS Sbjct: 304 TQEVYVQGLSTSLPEDVQHEILKTVPGLESVRMMRPGYAIEYDAIVPTQLWPSLETKRIS 363 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQINGT+GYEEAA QGL+AGIN+A K + + + R+++YIGV+IDDL +KG Sbjct: 364 GLFTAGQINGTSGYEEAAGQGLMAGINAALKVQEKEPLILDRSEAYIGVLIDDLVTKGTN 423 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS- 480 EPYR+ TSRAE+R+ LR DNAD RLT G ++G + + R + F + E L+ Sbjct: 424 EPYRLLTSRAEFRLLLRHDNADLRLTEKGYEIGLVNQNRFEGFEQKKAEIAKEIKRLRKA 483 Query: 481 -LVLTSKNLSSTS-ISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 + T +N + + +A + P+ S + ++ P + V E+++I Sbjct: 484 IIKATPENNQVLEDLGASPLKEAMSADVLIKRPELSYSLVDALVPAETVLTDDVKEQVEI 543 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + Y Y +Q+ + + E R IP+D DY S+ L+ E ++KL+ ++P ++ QAS++ Sbjct: 544 QIKYEGYIAKQLEQVERSLKMENRKIPEDIDYLSINGLAIEARQKLNEVRPISVGQASRV 603 Query: 599 EGMTPAALNLLLIYIKKNTVK 619 G+ P+ +++LL+Y+++ ++ Sbjct: 604 SGVNPSDISVLLVYLEQGRLQ 624 >gi|224823521|ref|ZP_03696630.1| glucose inhibited division protein A [Lutiella nitroferrum 2002] gi|224603976|gb|EEG10150.1| glucose inhibited division protein A [Lutiella nitroferrum 2002] Length = 630 Score = 791 bits (2043), Expect = 0.0, Method: Composition-based stats. Identities = 284/625 (45%), Positives = 388/625 (62%), Gaps = 5/625 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+GGGHAG EAA AA++G ST L+TH T+G MSCNP+IGG+GKGHLV+E+DA Sbjct: 6 TFDVIVVGGGHAGTEAALAAARMGCSTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D GIQFR LN KGPAVR R QADR LY+ A++ + +Q+NL + Q V Sbjct: 66 LGGAMALATDIGGIQFRTLNASKGPAVRATRAQADRVLYKAAIRHVLENQDNLTLFQQPV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ + R TVVLT GTFL G IH+G GR GD+ +++L Sbjct: 126 DDLLIEGDRVAGAITAIGITFRAKTVVLTAGTFLSGKIHVGLENYTGGRAGDAAASTLGA 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK-ITNRQIECGIT 243 + D GRLKTGTP R+DG+T+ + E+Q D FS+ + + +Q+ C IT Sbjct: 186 RLRELDLPVGRLKTGTPPRIDGRTVDFSVMEEQPGDTPEPVFSYRGSRSLHPKQLPCWIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II + S +++G I+ GPRYCPSIEDKI RF +++ HQ+FLEPEGL T Sbjct: 246 HTNERTHEIIRSGFERSPMFTGVIEGVGPRYCPSIEDKINRFADKDSHQVFLEPEGLTTH 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP ++Q +R+I G+E +I+RPGYAIEYDY +P+ L TLETK I GL Sbjct: 306 EFYPNGISTSLPFDVQLAAVRSIRGMENAHILRPGYAIEYDYFDPRGLKSTLETKSIQGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+A S D C R ++Y+GV++DDL +KGV EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGLNAALYSRDQDGWCPRRDEAYLGVLVDDLITKGVSEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R+ LR DNAD RLT G +LG +G+ + F + ++ LK+ L Sbjct: 426 YRMFTSRAEFRLQLREDNADLRLTEAGRRLGLVGDAQWDAFCRKRDAVEAEKTRLKTTYL 485 Query: 484 TSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIE 539 + + K + ++ L PD S L ++ V E+++I+ Sbjct: 486 HPAKVDMAAVAQLLGKPIEREYNLHDLLKRPDVSYTALMTLAEAGGGVDDGAVAEQVEIQ 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ E E +P D DYS + LS E+++KL+ +P L QAS+I+ Sbjct: 546 VKYQGYIDRQNDELARRDNLEDVRLPADIDYSLVKGLSKEVQQKLNSQRPETLGQASRIQ 605 Query: 600 GMTPAALNLLLIYIKKNTVKLNEIV 624 G+TPAA+ LL++++K+ + Sbjct: 606 GITPAAVALLMVHLKRGFADAKKTA 630 >gi|92115410|ref|YP_575338.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Chromohalobacter salexigens DSM 3043] gi|122419017|sp|Q1QSB9|MNMG_CHRSD RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|91798500|gb|ABE60639.1| glucose inhibited division protein A [Chromohalobacter salexigens DSM 3043] Length = 631 Score = 791 bits (2043), Expect = 0.0, Method: Composition-based stats. Identities = 285/617 (46%), Positives = 387/617 (62%), Gaps = 7/617 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FDVIVIGGGHAGTEAALAAARMGCQTLLLTHNIETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFRVLN +KGPAVR R QADR Y+ A++ + +Q NL + Q Sbjct: 67 GGAMAHATDLGGIQFRVLNARKGPAVRATRAQADRVRYKAAIRGMLENQPNLTLFQQAAD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + +V Q + +VVL TGTFL GVIHIG GR GD PSN+L Sbjct: 127 DLIVENDTVRGVVTQTGIRVFGESVVLCTGTFLGGVIHIGLDHHAGGRAGDPPSNALAQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIECGITR 244 F RLKTGTP RLD K++ + E Q D+ S++ + + RQ+ C I Sbjct: 187 LRALPFHVDRLKTGTPPRLDAKSVDFSVLETQPGDDPTPVMSYLGRRDQHPRQVACHIAH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +YSG I GPRYCPSIEDK+ RF +++ HQIF+EPEGL+T Sbjct: 247 TNARTHEIIHANLDRSPMYSGVIGGVGPRYCPSIEDKVNRFADKSSHQIFVEPEGLDTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q + +R+I G E +I RPGYAIEYD+ +P++L +LETK I LF Sbjct: 307 LYPNGISTSLPFDVQFEVVRSIKGFENAHITRPGYAIEYDFFDPRDLKHSLETKFIHNLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AG+N+AR++ D R ++Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGLNAARRAQGQDAWSPRRDEAYLGVLVDDLITMGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAE+R+ LR DNAD RLT IG +LG + + R F+ + L+ + Sbjct: 427 RMFTSRAEHRLLLREDNADLRLTEIGRELGLVDDTRWAHFSTKREAIARETERLRETWVQ 486 Query: 485 SKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 + + +S K D + + L P+ + +L DA + V E++QI++ Sbjct: 487 PSSELAKRLSGKLDKPLAREYRLADLLKRPELNHADLAD---DAPELDPAVAEQVQIQAK 543 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y RQ E ++ E +P+D DY+ + LS+E+++KL +P L QA +I G+ Sbjct: 544 YQGYIARQQDEIDRLRRHEALRLPEDLDYARIDGLSHEIRQKLEAARPETLAQAGRISGV 603 Query: 602 TPAALNLLLIYIKKNTV 618 TPAA++LLL+++KK + Sbjct: 604 TPAAVSLLLVHLKKRRL 620 >gi|187930588|ref|YP_001901075.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ralstonia pickettii 12J] gi|238691852|sp|B2UGW0|MNMG_RALPJ RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|187727478|gb|ACD28643.1| glucose inhibited division protein A [Ralstonia pickettii 12J] Length = 649 Score = 791 bits (2043), Expect = 0.0, Method: Composition-based stats. Identities = 287/632 (45%), Positives = 385/632 (60%), Gaps = 15/632 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNP+IGG+GKGHLV+E+DA Sbjct: 6 EFDVIVVGGGHAGTEAALAAARMGCQTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 66 LGGAMAIATDEGGIQFRILNSSKGPAVRATRAQADRVLYKAAIRHRLENQPNLMLFQQAV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + V Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 126 EDLVVEGDRVIGAVTQVGVQFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSA 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTD-KITNRQIECGI 242 + GRLKTGTP R+DG++I + E+Q D +P FSFM + RQ+ C + Sbjct: 186 RLKELKLPQGRLKTGTPPRIDGRSIDFSVLEEQPGDLDPVPVFSFMGRADMHPRQVPCWV 245 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T Sbjct: 246 THTNERTHDIIRAGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLAT 305 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + YPNG+ST+LP ++Q I ++ GLE +I+RPGYAIEYDY +P+ L +LE+K ISG Sbjct: 306 NEFYPNGVSTSLPFDVQLDLIHSMRGLENAHILRPGYAIEYDYFDPRGLKASLESKAISG 365 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AGIN+ + D R +Y+GV++DDL ++GV E Sbjct: 366 LFFAGQINGTTGYEEAAAQGLLAGINAGLQVQGKDAWTPRRDQAYLGVLVDDLITRGVTE 425 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAE+R+SLR DNAD RLT +G LG + + R F + + LKS Sbjct: 426 PYRMFTSRAEFRLSLREDNADMRLTEVGRTLGVVDDARWDAFNRKRDAVSRETERLKSTW 485 Query: 483 LTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQN----------LFSICPDARKFS 529 + L + + K + + L P+ + + L S + + Sbjct: 486 VNPATLPLEDAEPVLGKGIEREYALADLLRRPNVTYETLVGMQGGKYALESPLAEDPLLA 545 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 + E+++I Y Y RQ E + + E +P DFDYS + LS E+++KL+ KP Sbjct: 546 EQIREQVEIGIKYHGYIARQADEVERLGANENTRLPADFDYSQVRGLSIEVQQKLAKHKP 605 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKKNTVKLN 621 + QAS+I G+TPAA++LLL+++KK ++ Sbjct: 606 ETIGQASRISGITPAAVSLLLVHLKKGVLRGQ 637 >gi|120556790|ref|YP_961141.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Marinobacter aquaeolei VT8] gi|166222941|sp|A1U7I5|MNMG_MARAV RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|120326639|gb|ABM20954.1| glucose inhibited division protein A [Marinobacter aquaeolei VT8] Length = 628 Score = 791 bits (2043), Expect = 0.0, Method: Composition-based stats. Identities = 288/617 (46%), Positives = 403/617 (65%), Gaps = 5/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G+ T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FDVIVIGGGHAGTEAALAAARMGSQTLLLTHNIETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M R D AGIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMARATDQAGIQFRVLNSRKGPAVRATRAQADRILYKAAIRHMLENQPNLTLFQQAAD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + +V Q TVVLTTGTFL GVIHIG GR GD+P+N+L Sbjct: 127 DLIVENDQVVGVVTQTGIRFNAKTVVLTTGTFLGGVIHIGMQNHAGGRAGDAPANALAKR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + F+ GRLKTGTP R+D +T+ + ++Q+ D+ SF+ + + QI C +TR Sbjct: 187 LRELPFNVGRLKTGTPPRIDARTVDFSAMQQQWGDDPTPVMSFIGSRDEHPEQICCYVTR 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETH II S +++G+I+ GPRYCPSIEDK+ RF +++ HQIF+EPEGL T+ Sbjct: 247 TTEETHDIIRSGFDRSPMFAGNIEGVGPRYCPSIEDKVNRFADKDSHQIFVEPEGLTTNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP +IQ + +R+IPG E +I+RPGYAIEYDY+NP++L TLETK I GL+ Sbjct: 307 LYPNGISTSLPFDIQLKAVRSIPGFENAHILRPGYAIEYDYLNPQDLRHTLETKFIQGLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AGIN++ ++ + R ++Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGINASLRARDQEEWYPRRDEAYLGVLVDDLITMGTQEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G KLG + + R ++F++ + RS L+S + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTETGRKLGLVDDERWQKFSEKCEGIAKERSRLESTRIH 486 Query: 485 SKNLSSTSISF---KQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 + + + + ++ E L P+ ++ I + + V ++++IE Sbjct: 487 PNTEAGERANGYLKQPMTRDQSLAELLRRPEIVYDHIAEIGAERAE-DPNVADQVEIEIK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y RQ E + ++ E +P D DY + LSNE+K+KL ++P + QAS+I+G+ Sbjct: 546 YEGYISRQADEIERLRKNENTALPLDLDYDVIGGLSNEIKQKLKDVRPETVAQASRIQGV 605 Query: 602 TPAALNLLLIYIKKNTV 618 TPAA++ +L+++KK + Sbjct: 606 TPAAVSQILVHLKKRDL 622 >gi|18311636|ref|NP_563570.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium perfringens str. 13] gi|21263661|sp|Q8XH31|MNMG_CLOPE RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|18146320|dbj|BAB82360.1| glucose-inhibited division protein [Clostridium perfringens str. 13] Length = 630 Score = 791 bits (2043), Expect = 0.0, Method: Composition-based stats. Identities = 267/616 (43%), Positives = 388/616 (62%), Gaps = 3/616 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYD++VIG GHAGCEA AA++G T + T ++ M CNP IGG KGHLVREIDA Sbjct: 7 SYDIVVIGAGHAGCEAGLAAARMGCKTLVCTLTLDSVAMMPCNPNIGGTAKGHLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG D IQ ++LN KGPAV R QAD++ Y+ M++ + +QENL + Q EV Sbjct: 67 LGGEMGVNIDHTFIQSKMLNTSKGPAVHSLRAQADKKKYQERMKKVLETQENLHLRQLEV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ ++ + C V++T+GT+L+ I IG + G G S +N L Sbjct: 127 VSVEVEDGKVKGVLTKNGAFFECKAVIMTSGTYLQSRIIIGDVSYSQGPNGLSNANELSK 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S + D R KTGTPAR++ +++ + K +Q DE +IPFSF++ I Q+ C +T Sbjct: 187 SLIDLGIDLRRFKTGTPARINKRSVDFSKMIEQPGDEEIIPFSFISGNIDRDQVSCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN ETH++I ENI S +Y+G IK GPRYCPSIEDK++RF +++ HQIF+EPEG +T+ Sbjct: 247 TNEETHKVIQENIHRSPMYNGSIKGVGPRYCPSIEDKVMRFQDKDRHQIFIEPEGDDTEE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+S++LPE++Q Q I+T+PGLE I+R YAIEYD I+P +L +LE K I G F Sbjct: 307 MYVGGMSSSLPEDVQVQMIKTVPGLENAEIMRTAYAIEYDCIDPTQLKASLEFKNIDGFF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQING++GYEEA AQG+VAGIN+A K D + +R+D Y+GV+IDDL +KG EPY Sbjct: 367 SAGQINGSSGYEEAGAQGIVAGINAALKVQGKDPMILTRSDGYVGVLIDDLITKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSRAEYR+ LR DNAD RLT IG +G + E R +F + Q LK L +T Sbjct: 427 RMMTSRAEYRLLLRQDNADFRLTEIGHNVGLVTEERWNKFKERKQNLERELERLKELQIT 486 Query: 485 SKNLSSTSI---SFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 +K ++ I + K YE + P+ +L + P+ + +++ I + Sbjct: 487 NKTENNEKIVELGSTELKKPIRMYELIKRPELDYFSLACLDPERPDLPKDIGDQINIIAR 546 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y Q+ + + K EK+++P+D DY+ + +L E +KL+ ++P N+ QAS+I G+ Sbjct: 547 YEGYIQTQLEQVAQFKKFEKKVLPEDLDYNDVNSLRIEAIQKLNKIRPLNIGQASRISGV 606 Query: 602 TPAALNLLLIYIKKNT 617 +PA +++LLI+++ Sbjct: 607 SPADISVLLIFLEHYR 622 >gi|300721123|ref|YP_003710391.1| glucose-inhibited division oxidoreductase-like protein [Xenorhabdus nematophila ATCC 19061] gi|297627608|emb|CBJ88127.1| glucose-inhibited division protein, oxidoreductase-like with FAD/NAD(P)-binding domain [Xenorhabdus nematophila ATCC 19061] Length = 618 Score = 791 bits (2042), Expect = 0.0, Method: Composition-based stats. Identities = 288/614 (46%), Positives = 392/614 (63%), Gaps = 5/614 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EID Sbjct: 5 EHFDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL GLM + D AGIQFR LN KGPAVR R QADR LYR A++ + +Q NL + Q Sbjct: 65 ALGGLMAKATDQAGIQFRTLNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQP 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E N ++ +V + + + +VVLT GTFL G IHIG GR GD P+ SL Sbjct: 125 VEDLIVENNTVTGVVTRMSLKFKAKSVVLTVGTFLDGKIHIGLENYSGGRAGDPPAISLS 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IECGI 242 + + RLKTGTP R+D ++I + + E+Q D FSFM + + Q I C I Sbjct: 185 HRLRELPLRVARLKTGTPPRIDARSIDFSQLEQQLGDNPTPVFSFMGNAAQHPQQILCYI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH +I N+ S +Y+G I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL + Sbjct: 245 THTNEKTHEVIRSNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLTS 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + +YPNGIST+LP ++Q Q + ++ G+E IIRPGYAIEYD+ +P+ L TLE+K I G Sbjct: 305 NEIYPNGISTSLPFDVQMQIVHSMKGMENARIIRPGYAIEYDFFDPRGLKQTLESKFIHG 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AG+N+AR + + R +YIGV++DDL + G E Sbjct: 365 LFFAGQINGTTGYEEAAAQGLLAGLNAARYATGEEGWFPRRDQAYIGVLVDDLCTLGTKE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT G +LG + + R K +++ ++ R L+++ Sbjct: 425 PYRMFTSRAEYRLMLREDNADLRLTEQGRRLGLVDDLRWKHYSRKVEMIEQERQRLRNIW 484 Query: 483 LTSK--NLSSTSISFK-QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQI 538 + NL + K K + L P+ + + L S+ A + ++++I Sbjct: 485 VHPHSDNLGDINQMLKTPLSKEANGEDLLRRPEMNYELLTSLSRFAPGLTEAQAADQVEI 544 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + Y Y RQ E ++ E +P D DY + LSNE+ KL+ KP ++ QAS+I Sbjct: 545 QVKYEGYIARQQEEIEKQLRNENTALPVDLDYQQVSGLSNEVIAKLNDHKPSSIGQASRI 604 Query: 599 EGMTPAALNLLLIY 612 G+TPAA+++LL++ Sbjct: 605 SGITPAAISILLVW 618 >gi|224498351|ref|ZP_03666700.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes Finland 1988] Length = 628 Score = 791 bits (2042), Expect = 0.0, Method: Composition-based stats. Identities = 263/619 (42%), Positives = 375/619 (60%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+G GHAG EA + ++GA T ++T + M CNP++GG KG +VREIDA Sbjct: 8 TFDVIVVGAGHAGVEAGLASGRMGAKTLMLTINLDMVAFMPCNPSVGGPAKGVVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ M+ I +EN+ + QG V Sbjct: 68 LGGEMGRNTDKTYIQMRMLNTGKGPAVRALRAQADKWDYQHEMKHTIEKEENITLRQGLV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ ++ TVV+TTGTF RG I +G+L+ +G PS L Sbjct: 128 DRLVIEDGVCKGVITNSGAIYYAKTVVITTGTFSRGEIIVGELRYSSGPNNQQPSVKLSE 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F+ R KTGTP R+ TI + KTE+Q D+ FSF T + Q+ C +T Sbjct: 188 HLEELGFELRRFKTGTPPRVKSSTIDYSKTEEQPGDDHPRAFSFDTVDMMLDQLPCWLTY 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +++ K G RYCPSIEDKIVRF ++ HQIFLEPEG NT+ Sbjct: 248 TNETTHEIIQANLHRSPMFTATKKGTGARYCPSIEDKIVRFSDKPRHQIFLEPEGKNTEE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPEE+Q + +R+IPGLE V ++R GYAIEYD + P +L+P+LETK + GLF Sbjct: 308 VYVQGLSTSLPEEVQREMLRSIPGLENVEMMRVGYAIEYDAVMPDQLWPSLETKLVEGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+ARK + + + R +YIGV+IDDL +KG EPY Sbjct: 368 TAGQINGTSGYEEAAGQGLMAGINAARKVFEKEPVILGRDQAYIGVLIDDLVTKGTEEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT IG ++G I + R +RF + L+ + Sbjct: 428 RLLTSRAEYRLLLRHDNADLRLTEIGHEIGLISDERYERFLAKQSAIEAEKERLQKTRIK 487 Query: 485 SKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 L +DG A + L P+ + + I + + E+++I+ Sbjct: 488 PTAEVQAMLKEIGSGELKDGI--LAADLLRRPEITYDKIAQIVSRETFVTDEIAEQVEIQ 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + ++ +++K E + IP++ DY ++ L+ E EKL ++P ++ QAS+I Sbjct: 546 VKYEGYIQKSNLQVEKMKRMEDKKIPENIDYDAISGLATEALEKLKKIEPLSIAQASRIS 605 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 606 GVNPADISILLVYIEQGKI 624 >gi|294143117|ref|YP_003559095.1| glucose-inhibited division protein A [Shewanella violacea DSS12] gi|293329586|dbj|BAJ04317.1| glucose-inhibited division protein A [Shewanella violacea DSS12] Length = 630 Score = 790 bits (2041), Expect = 0.0, Method: Composition-based stats. Identities = 292/622 (46%), Positives = 387/622 (62%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +DVIV+GGGHAG EAA AA++G+ T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 FHERFDVIVVGGGHAGTEAALAAARMGSKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M D AGIQFR LN KGPAVR R QADR LYR +Q+ + +Q NL + Q Sbjct: 63 IDALGGAMAIATDFAGIQFRTLNSSKGPAVRATRAQADRALYRAKIQQILQNQPNLKLFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V + ++ +V Q +TVVLT GTFL G IHIG GR GD PS + Sbjct: 123 QGVDDLIVKNGRVTGVVTQMGLAFEAATVVLTAGTFLSGKIHIGLQNYSGGRAGDPPSIA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIEC 240 L + + GRLKTGTP RLD TI +D +Q D L SF+ D K RQI C Sbjct: 183 LADRLRELPIRIGRLKTGTPPRLDANTINFDLMAEQKGDTPLPVMSFVGDVKDHPRQISC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +T TN TH II E + S +YSG I+ GPRYCPSIEDKI RF ++ HQIF+EPEGL Sbjct: 243 YVTHTNERTHDIIREGLDRSPLYSGVIEGIGPRYCPSIEDKINRFADKTSHQIFVEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 NT+ +YPNGIST+LP ++Q +RTI G+E IIRPGYAIEYDY +P++L +LETK I Sbjct: 303 NTNEIYPNGISTSLPFDVQINLVRTIKGMENAEIIRPGYAIEYDYFDPRDLKNSLETKSI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQINGTTGYEEAAAQGL+AG+N++ + + R +Y+GV++DDL++ G Sbjct: 363 GGLFFAGQINGTTGYEEAAAQGLLAGMNASLQVQGKESWSPRRDQAYLGVLVDDLSTLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT G +LG + + R +F++ + L+ Sbjct: 423 KEPYRMFTSRAEYRLLLREDNADLRLTEKGRELGLVDDNRWIQFSEKRESIELELQRLRG 482 Query: 481 LVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 L + + ++ + + + + L P+ L S+ E++ Sbjct: 483 LWVHPNSPLLGVLNPELNTPISREASFEDLLRRPEMDYPKLMSLEGFGPGLEDKRAAEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 QI+ Y+ Y RQ E + E +P D DY +P LSNE+ K++ KP + QAS Sbjct: 543 QIQVKYSGYIQRQQDEIDKALKHETTGLPLDLDYQEVPGLSNEVIAKMNEHKPETIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I GMTPAA+++LL+++K+ + Sbjct: 603 RISGMTPAAISILLVHLKRRGL 624 >gi|57651105|ref|YP_187523.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus COL] gi|151222823|ref|YP_001333645.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus str. Newman] gi|161353516|ref|YP_501497.2| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus NCTC 8325] gi|161510920|ref|YP_001576579.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|162138569|ref|YP_495279.2| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|258451370|ref|ZP_05699401.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Staphylococcus aureus A5948] gi|262049466|ref|ZP_06022338.1| glucose-inhibited division protein A [Staphylococcus aureus D30] gi|262051897|ref|ZP_06024112.1| glucose-inhibited division protein A [Staphylococcus aureus 930918-3] gi|282920716|ref|ZP_06328435.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus A9765] gi|284023034|ref|ZP_06377432.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus 132] gi|294849825|ref|ZP_06790565.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus A9754] gi|71152073|sp|Q5HCI4|MNMG_STAAC RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|172049080|sp|A6QKK1|MNMG_STAAE RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|189039363|sp|A8YYS0|MNMG_STAAT RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|205831559|sp|Q2FDE9|MNMG_STAA3 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|205831560|sp|Q2FUQ3|MNMG_STAA8 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|57285291|gb|AAW37385.1| glucose inhibited division protein A [Staphylococcus aureus subsp. aureus COL] gi|150375623|dbj|BAF68883.1| glucose-inhibited division protein A [Staphylococcus aureus subsp. aureus str. Newman] gi|160369729|gb|ABX30700.1| glucose inhibited division protein A [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|257860900|gb|EEV83717.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Staphylococcus aureus A5948] gi|259160224|gb|EEW45253.1| glucose-inhibited division protein A [Staphylococcus aureus 930918-3] gi|259162463|gb|EEW47033.1| glucose-inhibited division protein A [Staphylococcus aureus D30] gi|282594124|gb|EFB99112.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus A9765] gi|294823373|gb|EFG39802.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus A9754] gi|315197915|gb|EFU28248.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus CGS01] gi|320141414|gb|EFW33257.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus MRSA131] gi|320144397|gb|EFW36162.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus MRSA177] gi|329731594|gb|EGG67954.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus aureus subsp. aureus 21189] Length = 625 Score = 790 bits (2041), Expect = 0.0, Method: Composition-based stats. Identities = 283/624 (45%), Positives = 395/624 (63%), Gaps = 7/624 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + + YDVIVIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VRE Sbjct: 1 MVQEYDVIVIGAGHAGVEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R I +ENL ++Q Sbjct: 61 IDALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEENLHIMQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G V E N + + + V++TTGTFLRG I +G +K +G PS + Sbjct: 121 GMVDELIIEDNEVKGVRTNIGTEYLSKAVIITTGTFLRGEIILGNMKYSSGPNHQLPSIT 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L ++ + FD R KTGTP R++ KTI + KTE Q D+ FSF T + Q+ C Sbjct: 181 LSDNLRELGFDIVRFKTGTPPRVNSKTIDYSKTEIQPGDDVGRAFSFETTEYILDQLPCW 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN ETH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG N Sbjct: 241 LTYTNAETHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRN 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETK I Sbjct: 301 TNEVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKMIK 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 L+ AGQINGT+GYEEAA QGL+AGIN+A K SR+D+YIGV+IDDL +KG Sbjct: 361 NLYTAGQINGTSGYEEAAGQGLMAGINAAGKVLNTGEKILSRSDAYIGVLIDDLVTKGTN 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAEYR+ LR DNAD RLT +G +LG I E R RF + Q+ + L + Sbjct: 421 EPYRLLTSRAEYRLLLRHDNADLRLTDMGYELGMISEERYARFNEKRQQIDAEIKRLSDI 480 Query: 482 VLTSKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 + + S +DG A + L P+ + + + + + ++ V E++ Sbjct: 481 RIKPNEHTQAIIEQHGGSRLKDGI--LAIDLLRRPEMTYDIILELLEEEHQLNADVEEQV 538 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I++ Y Y + + + +++K E++ IP+D DYS + +L+ E +EKLS +KP N+ QAS Sbjct: 539 EIQTKYEGYINKSLQQVEKVKRMEEKKIPEDLDYSKIDSLATEAREKLSEVKPLNIAQAS 598 Query: 597 KIEGMTPAALNLLLIYIKKNTVKL 620 +I G+ PA +++LLIY+++ ++ Sbjct: 599 RISGVNPADISILLIYLEQGKLQR 622 >gi|153206122|ref|ZP_01945385.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Coxiella burnetii 'MSU Goat Q177'] gi|165918750|ref|ZP_02218836.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Coxiella burnetii RSA 334] gi|212217717|ref|YP_002304504.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Coxiella burnetii CbuK_Q154] gi|120577252|gb|EAX33876.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Coxiella burnetii 'MSU Goat Q177'] gi|165917578|gb|EDR36182.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Coxiella burnetii RSA 334] gi|212011979|gb|ACJ19359.1| glucose inhibited division protein A [Coxiella burnetii CbuK_Q154] Length = 627 Score = 790 bits (2041), Expect = 0.0, Method: Composition-based stats. Identities = 298/621 (47%), Positives = 399/621 (64%), Gaps = 5/621 (0%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 ++ +DVIV+GGGHAG EAA VAA++GA T L+TH T+G MSCNPAIGG+GK HLV+EI Sbjct: 5 SQQFDVIVVGGGHAGTEAALVAARMGARTLLLTHNIETLGQMSCNPAIGGIGKSHLVKEI 64 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G+M AD AGI FR LN +KGPAVR R QADR LY+ A+ + +Q +L + Q Sbjct: 65 DALGGIMALAADQAGIHFRTLNARKGPAVRATRAQADRVLYKAAIHHALENQPHLWLFQQ 124 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 V + N + +V Q TV+LT GTFL G IHIG GR GD P+ +L Sbjct: 125 GVDDLIIQNNRAAGVVTQMGLAFYAPTVILTVGTFLGGKIHIGMNHYRGGRAGDPPALAL 184 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECG 241 + F RLKTGTP R+DG+TI + + +Q +D+ L S+ + + RQ+ C Sbjct: 185 AERLREMPFRVERLKTGTPPRIDGRTINYSQLIEQPSDQPLPLMSYWSHGEDRPRQVSCF 244 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT+TN +TH II +K S ++SG I+ GPRYCPSIEDKIVRF +RN HQ+FLEPEGLN Sbjct: 245 ITQTNEKTHDIIRNGLKTSPLFSGVIEGVGPRYCPSIEDKIVRFADRNSHQLFLEPEGLN 304 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T VYPNG+ST+L ++Q FI +I GLEK +I RPGYAIEYDY +P++L P+LETK + Sbjct: 305 TPEVYPNGVSTSLSFDVQLDFIHSIKGLEKCHITRPGYAIEYDYFDPRDLKPSLETKYVP 364 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GL+ AGQINGTTGYEEAAAQGL+AGIN+A + + +R ++YIGV+IDDLT++G Sbjct: 365 GLYFAGQINGTTGYEEAAAQGLIAGINAALQIQERAPWTPARDEAYIGVLIDDLTTRGTN 424 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+ LR DNAD RLT G LGC+ + R F K + + LK Sbjct: 425 EPYRMFTSRAEYRLLLRQDNADLRLTEKGRDLGCVDDERWNFFVKKKETIEKEQQRLKKQ 484 Query: 482 VLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARK-FSSLVIERLQ 537 + K+ + +I + + +A + L P+ + L I V E++ Sbjct: 485 RIWPKSTVAKAIESRFQQLLERDYSAMDLLRRPEINYPALMQIEELGPAVLEPSVAEQID 544 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I++ Y Y Q+ E K + IP DY+ + LSNE+++KL+ KP L QAS+ Sbjct: 545 IQAKYEGYLTHQLAEIDRQKKYQTAQIPSSLDYNQVTGLSNEVRQKLNETKPTTLGQASR 604 Query: 598 IEGMTPAALNLLLIYIKKNTV 618 I G+TPAA++LLL+++KK + Sbjct: 605 IPGITPAAISLLLVHLKKKEL 625 >gi|126651989|ref|ZP_01724181.1| glucose-inhibited division protein A [Bacillus sp. B14905] gi|126591258|gb|EAZ85367.1| glucose-inhibited division protein A [Bacillus sp. B14905] Length = 630 Score = 790 bits (2041), Expect = 0.0, Method: Composition-based stats. Identities = 278/619 (44%), Positives = 398/619 (64%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIVIG GHAG EAA AAK+GA+T ++T I M CNP+IGG KG +VREIDA Sbjct: 9 TFDVIVIGAGHAGSEAAHAAAKMGANTLMLTINLDMIAFMPCNPSIGGPAKGIVVREIDA 68 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G+MG+V D IQ R+LN KGPAVR R QAD+ LY+ M+R + ENL + QG V Sbjct: 69 LGGVMGKVIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRILEETENLTIHQGMV 128 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ ++ Q ++ R TVV+TTGTFLRG I IG +K +G PS L + Sbjct: 129 EELIIEDGEVTGVITQIGAIYRAKTVVVTTGTFLRGEIIIGDIKYSSGPNNQQPSIRLAD 188 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + + FD R KTGTP R++ +TI +DKTE Q DE FSF T + Q+ C +T Sbjct: 189 NLKELGFDLVRFKTGTPPRVNNRTIDYDKTEIQPGDEVPRAFSFETTEFIMDQLPCWLTY 248 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETH II N+ S +YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 249 TSPETHEIIEANLHLSPMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTRE 308 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE +Q + +++IPGLE ++R GYAIEYD I P +L+PTLETK+I GL+ Sbjct: 309 VYVQGLSTSLPEHVQTRLLKSIPGLENAEMMRAGYAIEYDSIVPTQLWPTLETKRIKGLY 368 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAAAQGL+AG+N+A + + SR+D+YIGV+IDDL +KG EPY Sbjct: 369 TAGQINGTSGYEEAAAQGLMAGMNAAANVLGKEELILSRSDAYIGVLIDDLVTKGTNEPY 428 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RL + K+G + + R ++F + + + L+ +++ Sbjct: 429 RLLTSRAEYRLLLRHDNADLRLLELAYKIGMVPQERYEKFVEKKALIDNEIARLREIIIK 488 Query: 485 SKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + S S +DG + L P+ + + S+ P +F+ + E+++I+ Sbjct: 489 PNEATQVVIRSAGGSELKDGIR--GADLLKRPEMHYEMISSLIPADIEFTEEIKEQIEIQ 546 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + +++ +++ E + IP++ DY ++ L+ E ++KL + P ++ QAS+I Sbjct: 547 LKYEGYIEKALLQVEKLHKMENKKIPENIDYDAISGLATEARQKLKQVTPLSIAQASRIS 606 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 607 GVNPADISILLVYIEQGKI 625 >gi|16802001|ref|NP_472269.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria innocua Clip11262] gi|21263670|sp|Q926U8|MNMG_LISIN RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|16415483|emb|CAC98167.1| gidA [Listeria innocua Clip11262] Length = 629 Score = 790 bits (2041), Expect = 0.0, Method: Composition-based stats. Identities = 264/619 (42%), Positives = 377/619 (60%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+G GHAG EA + ++GA T ++T + M CNP++GG KG +VREIDA Sbjct: 8 TFDVIVVGAGHAGVEAGLASGRMGAKTLMLTINLDMVAFMPCNPSVGGPAKGVVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ M+ I +EN+ + QG V Sbjct: 68 LGGEMGRNTDKTYIQMRMLNTGKGPAVRALRAQADKWDYQHEMKHTIEKEENITLRQGLV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ ++ TVV+TTGTF RG I +G+L+ +G PS L Sbjct: 128 DRLVIEDGVCKGVITNSGAIYYAKTVVITTGTFSRGEIIVGELRYSSGPNNQQPSVKLSE 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F+ R KTGTP R+ TI + KTE+Q D+ FSF T ++ Q+ C +T Sbjct: 188 HLEELGFELRRFKTGTPPRVKSSTIDYSKTEEQPGDDHPRAFSFDTVEMMLEQLPCWLTY 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +++ K G RYCPSIEDKIVRF ++ HQIFLEPEG NT+ Sbjct: 248 TNETTHEIIQANLHRSPMFTATKKGTGARYCPSIEDKIVRFSDKPRHQIFLEPEGKNTEE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPEE+Q + +RTIPGLE V ++R GYAIEYD + P +L+P+LETK + GLF Sbjct: 308 VYVQGLSTSLPEEVQREMLRTIPGLENVEMMRVGYAIEYDAVMPDQLWPSLETKLVEGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+ARK + + + R +YIGV+IDDL +KG EPY Sbjct: 368 TAGQINGTSGYEEAAGQGLMAGINAARKVFEKEPVILGRDQAYIGVLIDDLVTKGTEEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT IG ++G I + R +RF + + L+ + Sbjct: 428 RLLTSRAEYRLLLRHDNADLRLTEIGHEIGLISDERYERFLAKQRAIEAEKERLQKTRIK 487 Query: 485 SKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 L +DG A + L P+ + + I + + E+++I+ Sbjct: 488 PTAEVQAMLKEIGSGELKDGI--LAADLLRRPEITYDKIAQIVSRETFVTDEIAEQVEIQ 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + ++ +++K E + IP++ DY ++ L+ E EKL ++P ++ QAS+I Sbjct: 546 IKYEGYIQKSNLQVEKMKRMEDKKIPENIDYDAISGLATEALEKLKKIEPLSIAQASRIS 605 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 606 GVNPADISILLVYIEQGKI 624 >gi|299541771|ref|ZP_07052094.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lysinibacillus fusiformis ZC1] gi|298725509|gb|EFI66150.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lysinibacillus fusiformis ZC1] Length = 630 Score = 790 bits (2040), Expect = 0.0, Method: Composition-based stats. Identities = 278/619 (44%), Positives = 391/619 (63%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIVIG GHAG EAA AAK+GAST ++T I M CNP+IGG KG +VREIDA Sbjct: 9 TFDVIVIGAGHAGSEAAHAAAKMGASTLMLTINLDMIAFMPCNPSIGGPAKGIVVREIDA 68 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G+MG+V D IQ R+LN KGPAVR R QAD+ LY+ M+R + NL + QG V Sbjct: 69 LGGVMGKVIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVLEETPNLTIHQGMV 128 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ Q ++ R TVV+TTGTFLRG I IG +K +G PS L + Sbjct: 129 EELIIEDGEVKGVITQIGAVYRAKTVVVTTGTFLRGEIIIGDIKYSSGPNNQQPSIRLAD 188 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + + FD R KTGTP R++ +TI +DKTE Q D+ FSF T + Q+ C +T Sbjct: 189 NLKELGFDLVRFKTGTPPRVNNRTINYDKTEIQPGDDVPRAFSFETTEFIMDQLPCWLTY 248 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ ETH II N+ S +YSG IK GPRYCPSIEDK+VRF ++ HQIFLEPEG NT Sbjct: 249 TSPETHEIIEANLHLSPMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRNTRE 308 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE +Q + +++IPGLE ++R GYAIEYD I P +L+PTLETK+I GL+ Sbjct: 309 VYVQGLSTSLPEHVQTRLLKSIPGLENAEMMRAGYAIEYDSIVPTQLWPTLETKRIKGLY 368 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAAAQGL+AG+N+A D + SR+D+YIGV+IDDL +KG EPY Sbjct: 369 TAGQINGTSGYEEAAAQGLMAGMNAAANVLGKDELILSRSDAYIGVLIDDLVTKGTNEPY 428 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RL + +G I + R F + + + L+ +++ Sbjct: 429 RLLTSRAEYRLLLRHDNADLRLVELAYNMGMIPQERYASFNEKKELIENEIARLREVIIK 488 Query: 485 SKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + S S +DG + L P+ + + S+ P + + V E+++I+ Sbjct: 489 PNEATQSVIRSVGGSELKDGIR--GADLLKRPEMHYELISSLIPAEIELADEVKEQIEIQ 546 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + + +++ E + IP++ DY ++ L+ E ++KL + P ++ QAS+I Sbjct: 547 LKYEGYIEKALQQVEKLHKMENKKIPENIDYDAISGLATEARQKLKQVTPLSIAQASRIS 606 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 607 GVNPADISILLVYIEQGKI 625 >gi|332524941|ref|ZP_08401127.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rubrivivax benzoatilyticus JA2] gi|332108236|gb|EGJ09460.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Rubrivivax benzoatilyticus JA2] Length = 650 Score = 790 bits (2040), Expect = 0.0, Method: Composition-based stats. Identities = 289/641 (45%), Positives = 400/641 (62%), Gaps = 22/641 (3%) Query: 1 MIN-RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLV 59 M++ +++DVIV+GGGHAG EAA AA++G +T L+TH T+G MSCNP+IGG+GKGHLV Sbjct: 1 MLHPQAFDVIVVGGGHAGTEAALAAARMGCTTLLLTHNIETLGQMSCNPSIGGIGKGHLV 60 Query: 60 REIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDV 119 +E+DAL G M D +GIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Sbjct: 61 KEVDALGGAMAEATDESGIQFRILNGSKGPAVRATRAQADRVLYKAAIRRRLENQPNLWL 120 Query: 120 IQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 Q E + ++ ++ Q VVLT GTFL G +H+G AGR GD + Sbjct: 121 FQQACDDLIVEGDRVTGVITQIGLRFNARAVVLTAGTFLDGRVHVGLENYRAGRAGDPAA 180 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFM-TDKITNRQ 237 +L + GRLKTGTP R+DG++I + + E+Q D +P F F+ T ++ RQ Sbjct: 181 TTLSARLKELKLPQGRLKTGTPPRIDGRSIDFSRLEEQPGDLDPVPVFGFLGTPEMHPRQ 240 Query: 238 IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 + C IT TN TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEP Sbjct: 241 LPCWITHTNERTHEIIRSGFDRSPMFTGIIEGVGPRYCPSIEDKINRFADKSSHQIFLEP 300 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EGL T YPNG+ST+LP ++Q IRT+PGLE +I+RPGYAIEYDY +P+EL P+ ET Sbjct: 301 EGLTTHEFYPNGVSTSLPFDVQLGAIRTMPGLENAHILRPGYAIEYDYFDPRELKPSFET 360 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 + I GLF AGQINGTTGYEEAAAQGL AG N+A ++ + R +Y+GV++DDL + Sbjct: 361 QAIGGLFFAGQINGTTGYEEAAAQGLFAGANAALQAQGREPWTPRRDQAYLGVLVDDLVT 420 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL 477 KG+ EPYRMFTSRAEYR+ LR DNAD RLT IG +LG +G+ R F + + + Sbjct: 421 KGITEPYRMFTSRAEYRLQLREDNADLRLTAIGRELGLVGDARWDAFCRKRERLEREQQR 480 Query: 478 LKSLVLTSKNLSSTSIS---FKQDGKTRTAYEFLSYPDFSIQNLFSI-----CPDA---- 525 LKS + L++ K + L P +++ PD Sbjct: 481 LKSTWVRPATLAAADAERFIGKALEHEYNLADLLRRPGVDFDAVWAAAAAAGVPDVVSRG 540 Query: 526 -------RKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSN 578 + + VIE+ +I YA Y +Q+ E + E+ +P++ DY+ + ALS Sbjct: 541 TLQAEYGAREADAVIEQAEIAIKYAGYIDKQVDEVQRAAHYEQMKLPEELDYAQVTALSF 600 Query: 579 ELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 E+++KL+ +P L QAS+I G+TPAA++LLL+++KK K Sbjct: 601 EVRQKLTRHRPETLGQASRISGVTPAAISLLLVHLKKGRFK 641 >gi|187933395|ref|YP_001887733.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium botulinum B str. Eklund 17B] gi|187721548|gb|ACD22769.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium botulinum B str. Eklund 17B] Length = 626 Score = 790 bits (2040), Expect = 0.0, Method: Composition-based stats. Identities = 279/616 (45%), Positives = 397/616 (64%), Gaps = 3/616 (0%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALD 66 DV+V+G GHAGCEAA +A++G +T + T +I M CNP IGG KGHLVREIDAL Sbjct: 11 DVVVVGAGHAGCEAALASARMGLNTLICTINLDSIAMMPCNPNIGGTAKGHLVREIDALG 70 Query: 67 GLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAG 126 G MG D IQ R+LN KGPAV R QAD++ Y+ M+R + QENL + Q EV Sbjct: 71 GEMGVNIDHTFIQSRMLNTSKGPAVHSLRAQADKKDYQFRMKRVLEEQENLQIRQIEVTE 130 Query: 127 FNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSF 186 E N I+ ++ ++ ++ R V+L+TGT+L+G I IG++ G G P+N L S Sbjct: 131 LLVEDNKITGVITKNGAIFRAKAVILSTGTYLKGKIIIGEVSYSGGPNGLFPANDLSQSL 190 Query: 187 MKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTN 246 + R KTGTPAR++ +++ + K +Q D++++PFSFM+ I QI C +T TN Sbjct: 191 LDLGISLRRFKTGTPARINRRSVDFSKMIEQPGDDKIVPFSFMSGNIDKEQISCYLTYTN 250 Query: 247 LETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVY 306 +TH +I ENI S IY+G IK GPRYCPSIEDK++RF ++ HQIF+EPEGL+T +Y Sbjct: 251 EQTHNVIKENIGRSPIYNGSIKGVGPRYCPSIEDKVMRFPDKLQHQIFVEPEGLDTLEMY 310 Query: 307 PNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLA 366 G+S++LPEE+Q + +RT+PGLE V I+R YAIEYD ++P EL PTLE K + GL+ A Sbjct: 311 VGGMSSSLPEEVQLKMMRTLPGLENVEIMRTAYAIEYDSVDPTELEPTLEFKNVEGLYGA 370 Query: 367 GQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRM 426 GQ NG++GYEEA AQGLVAGIN+A K + + +R+D+YIGV+IDDL +KG EPYRM Sbjct: 371 GQFNGSSGYEEAGAQGLVAGINAALKIKGEEPMILTRSDAYIGVLIDDLVTKGTNEPYRM 430 Query: 427 FTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSK 486 TSRAEYR+ LR DNAD RLT IG K+G + E R + F LK L +T+K Sbjct: 431 MTSRAEYRLILRQDNADFRLTEIGKKVGLVTEERYETFLNRKNTIENELERLKKLQITNK 490 Query: 487 NLSSTSI---SFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 ++ + + K + YE + P+ +L + P+ + S + E++ I + Y Sbjct: 491 RETNEFLLASGSAELKKPISFYELIKRPEVDYFSLKDLDPEREELSEDIGEQINIIAKYE 550 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y Q+ + + + EK+L+PKD DYS++ L E ++KL+ +KP ++ QAS+I G++P Sbjct: 551 GYISNQLEQVAQFRKFEKKLLPKDIDYSNVKGLRTEAEQKLNSIKPISIGQASRISGVSP 610 Query: 604 AALNLLLIYIKKNTVK 619 A +++LLIY++ K Sbjct: 611 ADISVLLIYLEHYYNK 626 >gi|16804847|ref|NP_466332.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes EGD-e] gi|47093269|ref|ZP_00231040.1| glucose-inhibited division protein A [Listeria monocytogenes str. 4b H7858] gi|217965983|ref|YP_002351661.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes HCC23] gi|224502776|ref|ZP_03671083.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes FSL R2-561] gi|226225360|ref|YP_002759467.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes Clip81459] gi|254824825|ref|ZP_05229826.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes FSL J1-194] gi|254827378|ref|ZP_05232065.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes FSL N3-165] gi|254930916|ref|ZP_05264275.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes HPB2262] gi|255028099|ref|ZP_05300050.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes LO28] gi|284800303|ref|YP_003412168.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes 08-5578] gi|284993488|ref|YP_003415256.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes 08-5923] gi|290891991|ref|ZP_06554988.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes FSL J2-071] gi|21263664|sp|Q8Y3M5|MNMG_LISMO RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|16412310|emb|CAD01023.1| gidA [Listeria monocytogenes EGD-e] gi|47018343|gb|EAL09105.1| glucose-inhibited division protein A [Listeria monocytogenes str. 4b H7858] gi|217335253|gb|ACK41047.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes HCC23] gi|225877822|emb|CAS06537.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258599756|gb|EEW13081.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes FSL N3-165] gi|284055865|gb|ADB66806.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes 08-5578] gi|284058955|gb|ADB69894.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes 08-5923] gi|290558585|gb|EFD92102.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes FSL J2-071] gi|293582462|gb|EFF94494.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes HPB2262] gi|293594065|gb|EFG01826.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes FSL J1-194] gi|307572400|emb|CAR85579.1| glucose-inhibited division protein A [Listeria monocytogenes L99] gi|328468282|gb|EGF39288.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes 1816] gi|332313240|gb|EGJ26335.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [Listeria monocytogenes str. Scott A] Length = 629 Score = 790 bits (2040), Expect = 0.0, Method: Composition-based stats. Identities = 264/619 (42%), Positives = 376/619 (60%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+G GHAG EA + ++GA T ++T + M CNP++GG KG +VREIDA Sbjct: 8 TFDVIVVGAGHAGVEAGLASGRMGAKTLMLTINLDMVAFMPCNPSVGGPAKGVVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ M+ I +EN+ + QG V Sbjct: 68 LGGEMGRNTDKTYIQMRMLNTGKGPAVRALRAQADKWDYQHEMKHTIEKEENITLRQGLV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ ++ TVV+TTGTF RG I +G+L+ +G PS L Sbjct: 128 DRLVIEDGVCKGVITNSGAIYYAKTVVITTGTFSRGEIIVGELRYSSGPNNQQPSVKLSE 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F+ R KTGTP R+ TI + KTE+Q D+ FSF T ++ Q+ C +T Sbjct: 188 HLEELGFELRRFKTGTPPRVKSSTIDYSKTEEQPGDDHPRAFSFDTVEMLLDQLPCWLTY 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +++ K G RYCPSIEDKIVRF ++ HQIFLEPEG NT+ Sbjct: 248 TNETTHEIIQANLHRSPMFTATKKGTGARYCPSIEDKIVRFSDKPRHQIFLEPEGKNTEE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPEE+Q + +RTIPGLE V ++R GYAIEYD + P +L+P+LETK + GLF Sbjct: 308 VYVQGLSTSLPEEVQREMLRTIPGLENVEMMRVGYAIEYDAVMPDQLWPSLETKLVEGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+ARK + + + R +YIGV+IDDL +KG EPY Sbjct: 368 TAGQINGTSGYEEAAGQGLMAGINAARKVFEKEPVILGRDQAYIGVLIDDLVTKGTEEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT IG ++G I + R +RF + L+ + Sbjct: 428 RLLTSRAEYRLLLRHDNADLRLTEIGHEIGLISDERYERFLAKQSAIEAEKERLQKTRIK 487 Query: 485 SKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 L +DG A + L P+ + + I + + E+++I+ Sbjct: 488 PTAEVQAMLKEIGSGELKDGI--LAADLLRRPEITYDKIAQIVSRETFVTDEIAEQVEIQ 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + ++ +++K E + IP++ DY ++ L+ E EKL ++P ++ QAS+I Sbjct: 546 IKYEGYIQKSNLQVEKMKRMEDKKIPENIDYDAISGLATEALEKLKKIEPLSIAQASRIS 605 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 606 GVNPADISILLVYIEQGKI 624 >gi|88797178|ref|ZP_01112768.1| glucose-inhibited division protein A [Reinekea sp. MED297] gi|88780047|gb|EAR11232.1| glucose-inhibited division protein A [Reinekea sp. MED297] Length = 628 Score = 790 bits (2040), Expect = 0.0, Method: Composition-based stats. Identities = 292/624 (46%), Positives = 395/624 (63%), Gaps = 4/624 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +DVIVIGGGHAG EAA +A+ GA T L+TH TIG MSCNPAIGG+GK HLV+E Sbjct: 3 FPKQFDVIVIGGGHAGTEAALASARTGAQTLLLTHNIDTIGVMSCNPAIGGIGKSHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M R D AGIQ+R+LN +KGPAVR R QADR+LYR A+++ + SQ NL++ Sbjct: 63 IDALGGAMARATDLAGIQWRILNSRKGPAVRATRAQADRQLYRAAIRQIVESQPNLEIFA 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 + + + V Q I VVLT GTFL G IH+G GRMGD+PS S Sbjct: 123 QAADDLILDGDRVVGAVTQTGIRILAKAVVLTAGTFLNGKIHVGTDNYAGGRMGDTPSIS 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIEC 240 L + TGRLKTGTPAR+D +++ + +Q D L S++ + RQI C Sbjct: 183 LAERLKELPIRTGRLKTGTPARIDARSVDFSVMTEQPGDAPLPVMSYIGRVEDHPRQISC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 I+ T +TH II N+ SA++SG+I+ GPRYCPSIEDKI RF +++ HQIF+EPEGL Sbjct: 243 YISHTTEQTHDIIRSNLDRSAMFSGNIEGTGPRYCPSIEDKITRFADKDSHQIFVEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T +YPNGIST+LP ++Q FIRTI G E +I RPGYAIEYDY NP++L +LE+K I Sbjct: 303 TTYELYPNGISTSLPFDVQVSFIRTIRGFENAHITRPGYAIEYDYYNPQDLKHSLESKFI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 LF AGQINGTTGYEEA AQGL+AG+N+ARK+ + D R ++YIGV++DDL + G Sbjct: 363 GSLFFAGQINGTTGYEEAGAQGLLAGLNAARKAREQDVWYPRRDEAYIGVLVDDLITMGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAE+R+ LR DNAD RLT G +LG + + R F + ++ +K+ Sbjct: 423 KEPYRMFTSRAEHRLLLREDNADARLTETGRQLGLVDDERWSAFCTKQENIAREQARVKT 482 Query: 481 LVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 + ++ IS K + + + L P+ ++ + P S E+++ Sbjct: 483 TYIQPNTAAAAQISEKLPQPLTREFSLGDLLKRPELGYSDIAAAMPPEAPLSLYEAEQVE 542 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I + Y Y RQ E + +K E +P+ D S+ LSNE+K+KL ++P L QAS+ Sbjct: 543 ISAKYEGYIQRQQDEIESLKRHENTRLPETLDIDSIGGLSNEVKQKLKEVRPETLAQASR 602 Query: 598 IEGMTPAALNLLLIYIKKNTVKLN 621 I G+TPAA+++LL++IKK+ Sbjct: 603 ISGVTPAAVSMLLVHIKKHNASRQ 626 >gi|253730396|ref|ZP_04864561.1| glucose inhibited division protein A [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253725876|gb|EES94605.1| glucose inhibited division protein A [Staphylococcus aureus subsp. aureus USA300_TCH959] Length = 625 Score = 790 bits (2040), Expect = 0.0, Method: Composition-based stats. Identities = 283/624 (45%), Positives = 395/624 (63%), Gaps = 7/624 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + + YDVIVIG GHAG EA +A+ GA T ++T I M CNP++GG KG +VRE Sbjct: 1 MVQEYDVIVIGAGHAGVEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R I +ENL ++Q Sbjct: 61 IDALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEENLHIMQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G V E N + + + V++TTGTFLRG I +G +K +G PS + Sbjct: 121 GMVDELIIEDNEVKGVRTNIGTEYLSKAVIITTGTFLRGEIILGNMKYSSGPNHQLPSIT 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L ++ + FD R KTGTP R++ KTI + KTE Q D+ FSF T + Q+ C Sbjct: 181 LSDNLRELGFDIVRFKTGTPPRVNSKTIDYSKTEIQPGDDVGRAFSFETTEYILDQLPCW 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN ETH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG N Sbjct: 241 LTYTNAETHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRN 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ VY G+ST+LPE +Q Q + TIPGLEK +++R GYAIEYD I P +L+PTLETK I Sbjct: 301 TNEVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKMIK 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 L+ AGQINGT+GYEEAA QGL+AGIN+A K SR+D+YIGV+IDDL +KG Sbjct: 361 NLYTAGQINGTSGYEEAAGQGLMAGINAAGKVLNTGEKILSRSDAYIGVLIDDLVTKGTN 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAEYR+ LR DNAD RLT +G +LG I E R RF + Q+ + L + Sbjct: 421 EPYRLLTSRAEYRLLLRHDNADLRLTDMGHELGMISEERYARFNEKRQQIDAEIKRLSDI 480 Query: 482 VLTSKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 + + S +DG A + L P+ + + + + + ++ V E++ Sbjct: 481 RIKPNEHTQAIIEQHGGSRLKDGI--LAIDLLRRPEMTYDIILELLEEEHQLNADVEEQV 538 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I++ Y Y + + + +++K E++ IP+D DYS + +L+ E +EKLS +KP N+ QAS Sbjct: 539 EIQTKYEGYINKSLQQVEKVKRMEEKKIPEDLDYSKIDSLATEAREKLSEVKPLNIAQAS 598 Query: 597 KIEGMTPAALNLLLIYIKKNTVKL 620 +I G+ PA +++LLIY+++ ++ Sbjct: 599 RISGVNPADISILLIYLEQGKLQR 622 >gi|254427865|ref|ZP_05041572.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Alcanivorax sp. DG881] gi|196194034|gb|EDX88993.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Alcanivorax sp. DG881] Length = 631 Score = 790 bits (2040), Expect = 0.0, Method: Composition-based stats. Identities = 295/625 (47%), Positives = 392/625 (62%), Gaps = 4/625 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 ++ + VIVIGGGHAG EAA +A++G ST L+TH T+G MSCNPAIGG+GK HLVRE Sbjct: 3 FSQRFGVIVIGGGHAGTEAALASARMGVSTLLLTHNIETLGQMSCNPAIGGIGKSHLVRE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G MGR D GIQFRVLN +KGPAVR R QADRELY+ A++ + +Q++L + Q Sbjct: 63 IDALGGAMGRATDKGGIQFRVLNARKGPAVRATRAQADRELYKAAIRGTLENQQDLTLFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E +V VVLT GTFL GVIHIG GR GD PSN+ Sbjct: 123 QAVDDLIVENGRCVGVVTNMGLRFMADAVVLTAGTFLGGVIHIGMDNHQGGRAGDQPSNA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IEC 240 L + F RLKTGTP R+DGKT+ + E+Q+ D L S++ + Q + C Sbjct: 183 LARRLRELPFRVDRLKTGTPPRIDGKTVDFSVMEEQWGDSPLPVMSYLGQVEEHPQQVCC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH II S +++G I GPRYCPSIEDK+ R+ +++ HQIF+EPEGL Sbjct: 243 YITHTNAQTHDIIRSGFDRSPMFTGVIDGVGPRYCPSIEDKVNRYPDKDSHQIFVEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 NT +YPNGIST+LP ++Q Q +R+I G E +I RPGYAIEYDY NP++L +LET+ + Sbjct: 303 NTHELYPNGISTSLPFDVQLQAVRSIRGFENAHITRPGYAIEYDYFNPQDLKHSLETQHM 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQINGTTGYEEA AQGL+AG+N+A S D R ++YIGV++DDL + G Sbjct: 363 PGLFFAGQINGTTGYEEAGAQGLLAGLNAALLSQGKDAWTPRRDEAYIGVLVDDLITMGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT G +LG + + R F + LKS Sbjct: 423 QEPYRMFTSRAEYRLLLREDNADLRLTEKGRELGLVDDERWAAFNAKREGMAQEEQRLKS 482 Query: 481 LVLTSKNLSSTSIS---FKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 + K + +++ K + L P+ + NL A + S VIE+++ Sbjct: 483 TWVRPKTPQAEAVNALIEKPLAHEYNLLDLLKRPELTYANLADAVALAERPDSAVIEQME 542 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I + YA Y RQ E ++++ E +P +FDY + LSNE+K+KL ++P L QA + Sbjct: 543 ILAKYAGYIDRQADEIEKLRAAETTALPAEFDYGQVKGLSNEVKQKLGEIRPQTLGQAGR 602 Query: 598 IEGMTPAALNLLLIYIKKNTVKLNE 622 I G+TPAA++LL+IY+KK+ + Sbjct: 603 IPGVTPAAISLLMIYLKKHHHQKKA 627 >gi|118591440|ref|ZP_01548838.1| glucose-inhibited division protein A [Stappia aggregata IAM 12614] gi|118436112|gb|EAV42755.1| glucose-inhibited division protein A [Stappia aggregata IAM 12614] Length = 628 Score = 789 bits (2039), Expect = 0.0, Method: Composition-based stats. Identities = 357/622 (57%), Positives = 461/622 (74%), Gaps = 4/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 ++ ++DV+VIGGGHAGCEAAA +A+ GA+TAL+TH+ TIG MSCNPAIGGLGKGHLVRE Sbjct: 4 LDLTFDVVVIGGGHAGCEAAAASARAGAATALVTHRFDTIGVMSCNPAIGGLGKGHLVRE 63 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDALDGLMGRVAD GIQFR+LN +KGPAVRGPR QADR+LYR AMQREI + E L V++ Sbjct: 64 IDALDGLMGRVADKGGIQFRMLNRRKGPAVRGPRAQADRKLYREAMQREIAAVEGLSVVE 123 Query: 122 GEVAGFNTEKNI----ISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDS 177 GE E++ +S I + D +I C +VLT+GTFLRG+IHIG KIPAGR G++ Sbjct: 124 GEAHKIRFERDGETRSVSGIELADGRVINCRAIVLTSGTFLRGLIHIGDRKIPAGRSGEA 183 Query: 178 PSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ 237 P+ L S + FD GRLKTGTPARLDG+TI WDK E+Q DE IPFS +TDKI Q Sbjct: 184 PALGLSESLEEIGFDLGRLKTGTPARLDGRTIHWDKLEEQPGDEDPIPFSTLTDKIETPQ 243 Query: 238 IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 I C ITRT ETHRII EN+ SA+YSG+IK GPRYCPSIEDKIVRFG+R+GHQIFLEP Sbjct: 244 IPCHITRTTPETHRIIRENLSRSAMYSGEIKGRGPRYCPSIEDKIVRFGDRDGHQIFLEP 303 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EGL+ VYPNGIST+LPE+ Q F++TIPGLE V +++PGYAIEYD+++P+EL PTLE Sbjct: 304 EGLDDHTVYPNGISTSLPEDAQIAFLKTIPGLEDVVVLQPGYAIEYDHVDPRELRPTLEA 363 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 K+ SGL+LAGQINGTTGYEEA AQGL+AG+N+A K+ R++ YIGVMIDDL + Sbjct: 364 KRCSGLYLAGQINGTTGYEEAGAQGLIAGLNAALKAAGKAPFVVDRSEGYIGVMIDDLIT 423 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL 477 +G+ EPYRMFTSRAEYR+SLR DNAD RLTP+G+ +GC+ + R++ F + + R L Sbjct: 424 RGITEPYRMFTSRAEYRLSLRADNADQRLTPLGLAIGCVSDTRREAFETKMAKIAAAREL 483 Query: 478 LKSLVLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 L +L +T + QDG R+A++ LSYP+ + + L I P+ + + E++ Sbjct: 484 LTTLTVTPSEAQKKGLPVNQDGIRRSAFDLLSYPNVTFEGLTQIWPELKDIDPAIAEQVA 543 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 ++ YA Y RQM + + +K +E IP FDY ++ LSNE+++KL ++P L QAS+ Sbjct: 544 TDALYAVYLDRQMADIEALKRDEALSIPDGFDYEAITGLSNEVRQKLIDIRPATLGQASR 603 Query: 598 IEGMTPAALNLLLIYIKKNTVK 619 ++GMTPAAL L+L ++K+ + K Sbjct: 604 MDGMTPAALTLILSHLKRQSQK 625 >gi|30250397|ref|NP_842467.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Nitrosomonas europaea ATCC 19718] gi|81170562|sp|Q82S78|MNMG_NITEU RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|30181192|emb|CAD86388.1| gidA; glucose inhibited division protein A [Nitrosomonas europaea ATCC 19718] Length = 639 Score = 789 bits (2039), Expect = 0.0, Method: Composition-based stats. Identities = 294/629 (46%), Positives = 402/629 (63%), Gaps = 7/629 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 ++ +D+IV+GGGHAG EAA AA++G T L+T T+G MSCNP+IGG+GKGHLV+E Sbjct: 3 FSKDFDIIVVGGGHAGTEAALAAARMGQKTLLLTQNLDTLGQMSCNPSIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M D AGIQFR+LN KGPAVR R QADR LYR A++R + +Q +L ++Q Sbjct: 63 IDALGGAMAAATDEAGIQFRILNSSKGPAVRATRAQADRVLYRQAIRRRLEAQPDLLLLQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V + I+ +V VVLT GTFL GV H+G AGR GD S Sbjct: 123 STVDDLLLNGDKITGVVTHLGMTFSARAVVLTVGTFLGGVAHVGHQNFQAGRAGDPASIR 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIEC 240 L + + + GRLKTGTP R+D +TI + +Q DE + FSF+ + RQI C Sbjct: 183 LAHRLREMNLSVGRLKTGTPPRIDARTIDFRILREQPGDEPVPVFSFLGNITQHPRQISC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +TRTN TH II + S +Y+G I+ GPRYCPSIEDK+VRF ER+ H IFLEPEGL Sbjct: 243 WMTRTNERTHEIIRTGLDRSPLYTGKIEGIGPRYCPSIEDKVVRFSERDAHTIFLEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T +YPNGIST+LP ++Q + +R+I GLE +I RPGYAIEYDY +P+ L +LETK I Sbjct: 303 ETSEIYPNGISTSLPFDVQVELVRSIAGLENAHITRPGYAIEYDYFDPRTLKKSLETKVI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQINGTTGYEEAAAQGL+AG+N++ K + + C SR ++YIGV++DDL ++GV Sbjct: 363 DGLFFAGQINGTTGYEEAAAQGLLAGLNASLKIKEQEPWCPSRDEAYIGVLVDDLVTRGV 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAE+R+ LR DNAD RLT G +LG + E R + FA + ++ L++ Sbjct: 423 TEPYRMFTSRAEFRLQLREDNADMRLTETGYRLGLVSEERWQAFAAKREAIETEKTRLRN 482 Query: 481 LVLTSKNLSSTSISFKQ-DGKTRTAYEFLSYPDFSIQNLFSICPDARK-FSSLVIERLQI 538 ++ LS + D ++ + Y+ L P+ L S+ + S V ++++I Sbjct: 483 TWISPGTLSKLQTPDQPADDRSYSLYDLLRRPEIGYAELVSLSARGQSVIDSQVAQQVEI 542 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 + Y Y RQ E E ++PKD DY ++ LSNE+ +KL+ +P + QA++I Sbjct: 543 DVKYEGYIERQRQEVVRHAQHEAMILPKDMDYRAVRGLSNEVTQKLNQHQPETIGQAARI 602 Query: 599 EGMTPAALNLLLIYIK----KNTVKLNEI 623 G+TPAA++LLL+++K + VK E+ Sbjct: 603 SGITPAAISLLLVHLKRGMARQAVKREEM 631 >gi|78043339|ref|YP_358879.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Carboxydothermus hydrogenoformans Z-2901] gi|123577254|sp|Q3AG55|MNMG_CARHZ RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|77995454|gb|ABB14353.1| glucose inhibited division protein A [Carboxydothermus hydrogenoformans Z-2901] Length = 631 Score = 789 bits (2039), Expect = 0.0, Method: Composition-based stats. Identities = 277/620 (44%), Positives = 391/620 (63%), Gaps = 3/620 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDVIV+G GHAG EAA +A++G T L+T + M CNPA+GG KG +VRE+DA Sbjct: 7 DYDVIVVGAGHAGVEAALASARMGLKTLLLTLSLDNVALMPCNPAVGGPAKGVVVREVDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG D IQ R+LN KGPAVR R QAD+ Y+ M++ I QENL + Q E Sbjct: 67 LGGEMGINTDKTYIQIRMLNTGKGPAVRTLRAQADKRRYQEEMKKTIERQENLYLKQAET 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ + ++ VV+T+GT+L I IG + P+G G ++ L Sbjct: 127 IKILVEGEKVRGVLTRTGAVFTSRAVVVTSGTYLNSRIIIGDVHYPSGPAGFPYASLLSK 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S F GR KTGTPAR+D +T+ + K +Q D+R + FS+M++ I + C +T Sbjct: 187 SLADLGFKLGRFKTGTPARVDKRTVDFSKMIEQPGDDRPLYFSYMSEGIKRPNVSCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TNLETH II+EN+ S +YSG+IK GPRYCPSIEDK+VRF ++ HQ+FLEPEGL+T Sbjct: 247 TNLETHTIILENLHRSPLYSGEIKGVGPRYCPSIEDKVVRFSDKPRHQVFLEPEGLDTYE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+ST+LPE++Q + +RT+PGLE+V I+RP YAIEYDYI+P +L TLE K I GLF Sbjct: 307 MYVQGMSTSLPEDLQIKMLRTLPGLERVEIMRPAYAIEYDYIDPTQLKLTLEAKHIQGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QG+VAGIN+A + + R+++YIGVMIDDL +KGV +PY Sbjct: 367 FAGQINGTSGYEEAAGQGIVAGINAALYVKEKEPFILKRSEAYIGVMIDDLVTKGVTDPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT G K+G + E R ++F + +++ N L L+ +T Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTEKGYKIGLVTEERWRKFNERVEKINKLMEFLEENQVT 486 Query: 485 SKNLSSTSISF---KQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 + + + EFL P+ +++ + I +F V E+++I Sbjct: 487 PTKRNLEIMEEYGTSPPKHGISGKEFLRRPEINMEAIEKIFAIDGQFPDDVKEQVEILVK 546 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y +Q+ E + E + +P DFDYS + LS E +KL+ +KP N+ QAS++ G+ Sbjct: 547 YEGYIEKQLKEIERFNKYEGKKLPPDFDYSKVKGLSAEAVQKLNAIKPENIGQASRVSGV 606 Query: 602 TPAALNLLLIYIKKNTVKLN 621 TPA +++LLIY++ + N Sbjct: 607 TPADISVLLIYLESRKSEDN 626 >gi|154707156|ref|YP_001423623.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Coxiella burnetii Dugway 5J108-111] gi|161511216|ref|NP_820901.2| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Coxiella burnetii RSA 493] gi|161831260|ref|YP_001597739.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Coxiella burnetii RSA 331] gi|212211701|ref|YP_002302637.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Coxiella burnetii CbuG_Q212] gi|30581060|sp|P94613|MNMG_COXBU RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|189039337|sp|A9KBS8|MNMG_COXBN RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|189039338|sp|A9NBA8|MNMG_COXBR RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|154356442|gb|ABS77904.1| glucose inhibited division protein A [Coxiella burnetii Dugway 5J108-111] gi|161763127|gb|ABX78769.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Coxiella burnetii RSA 331] gi|206584175|gb|AAO91415.2| glucose inhibited division protein A [Coxiella burnetii RSA 493] gi|212010111|gb|ACJ17492.1| glucose inhibited division protein A [Coxiella burnetii CbuG_Q212] Length = 627 Score = 789 bits (2039), Expect = 0.0, Method: Composition-based stats. Identities = 298/621 (47%), Positives = 399/621 (64%), Gaps = 5/621 (0%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 ++ +DVIV+GGGHAG EAA VAA++GA T L+TH T+G MSCNPAIGG+GK HLV+EI Sbjct: 5 SQQFDVIVVGGGHAGTEAALVAARMGARTLLLTHNIETLGQMSCNPAIGGIGKSHLVKEI 64 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G+M AD AGI FR LN +KGPAVR R QADR LY+ A+ + +Q +L + Q Sbjct: 65 DALGGIMALAADQAGIHFRTLNARKGPAVRATRAQADRVLYKAAIHHALENQPHLWLFQQ 124 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 V + N + +V Q TV+LT GTFL G IHIG GR GD P+ +L Sbjct: 125 GVDDLIIQNNRAAGVVTQMGLAFYAPTVILTVGTFLGGKIHIGMNHYRGGRAGDPPALAL 184 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECG 241 + F RLKTGTP R+DG+TI + + +Q +D+ L S+ + + RQ+ C Sbjct: 185 AERLREMPFRVERLKTGTPPRIDGRTINYSQLIEQPSDQPLPLMSYWSHGEDRPRQVSCF 244 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT+TN +TH II +K S ++SG I+ GPRYCPSIEDKIVRF +RN HQ+FLEPEGLN Sbjct: 245 ITQTNEKTHDIIRNGLKTSPLFSGVIEGVGPRYCPSIEDKIVRFADRNSHQLFLEPEGLN 304 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T VYPNG+ST+L ++Q FI +I GLEK +I RPGYAIEYDY +P++L P+LETK + Sbjct: 305 TPEVYPNGVSTSLSFDVQLDFIHSIKGLEKCHITRPGYAIEYDYFDPRDLKPSLETKYVP 364 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GL+ AGQINGTTGYEEAAAQGL+AGIN+A + + +R ++YIGV+IDDLT++G Sbjct: 365 GLYFAGQINGTTGYEEAAAQGLIAGINAALQIQERAPWTPARDEAYIGVLIDDLTTRGTN 424 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+ LR DNAD RLT G LGC+ + R F K + + LK Sbjct: 425 EPYRMFTSRAEYRLLLRQDNADLRLTEKGRDLGCVDDERWNFFVKKKETIEKEQQRLKKQ 484 Query: 482 VLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARK-FSSLVIERLQ 537 + K+ + +I + + +A + L P+ + L I V E++ Sbjct: 485 RIWPKSTVAKAIESRFQQLLERDYSAMDLLRRPEINYPALMQIEELGPAVLEPSVAEQID 544 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I++ Y Y Q+ E K + IP DY+ + LSNE+++KL+ KP L QAS+ Sbjct: 545 IQAKYEGYLTHQLAEIARQKKYQTAQIPSSLDYNQVTGLSNEVRQKLNETKPTTLGQASR 604 Query: 598 IEGMTPAALNLLLIYIKKNTV 618 I G+TPAA++LLL+++KK + Sbjct: 605 IPGITPAAISLLLVHLKKKEL 625 >gi|160895496|ref|YP_001561078.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Delftia acidovorans SPH-1] gi|238687175|sp|A9BQJ1|MNMG_DELAS RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|160361080|gb|ABX32693.1| glucose inhibited division protein A [Delftia acidovorans SPH-1] Length = 659 Score = 789 bits (2039), Expect = 0.0, Method: Composition-based stats. Identities = 285/642 (44%), Positives = 392/642 (61%), Gaps = 23/642 (3%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + +DVIV+GGGHAG EAA AA++G T L++H T+G MSCNP+IGG+GKGHLV+ Sbjct: 2 LYPQEFDVIVVGGGHAGTEAALAAARMGCRTLLLSHNIETLGQMSCNPSIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DAL G M D GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Sbjct: 62 EVDALGGAMALATDIGGIQFRILNSSKGPAVRATRAQADRILYKAAIRDMLENQPNLWLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + + V Q R TVVLT GTFL G IH+G AGR GD P+ Sbjct: 122 QQAVDDLMVEGDRVVGAVTQVGVRFRSRTVVLTAGTFLDGKIHVGLNNYAAGRAGDPPAV 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERL--------IPFSFMTDK 232 SL + + GRLKTGTP RLDG++I + + E+Q D FSF+ + Sbjct: 182 SLSSRLKELQLPQGRLKTGTPPRLDGRSIDFSQCEEQPGDGMPGGVNEGVLPVFSFIGNA 241 Query: 233 -ITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGH 291 + RQ+ C IT TN TH II S +++G I+ GPRYCPS+EDKI RF ++ H Sbjct: 242 AMHPRQMPCWITHTNERTHDIIRSGFDRSPMFTGKIEGVGPRYCPSVEDKINRFADKESH 301 Query: 292 QIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKEL 351 QIFLEPEGL T+ YPNGIST+LP +IQ++ +R++ GLE +I+RPGYAIEYDY +P+ L Sbjct: 302 QIFLEPEGLTTNEFYPNGISTSLPFDIQYELVRSMKGLENAHILRPGYAIEYDYFDPRSL 361 Query: 352 FPTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVM 411 + ET++I GLF AGQINGTTGYEEAAAQGL AG+N+A + + R ++Y+GV+ Sbjct: 362 KSSFETRQIQGLFFAGQINGTTGYEEAAAQGLFAGLNAALQCRGQEAWLPRRDEAYLGVL 421 Query: 412 IDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEY 471 +DDL +KGV EPYRMFTSRAE+R+ LR DNAD RLT G +G + + R F++ Sbjct: 422 VDDLITKGVTEPYRMFTSRAEFRLQLREDNADMRLTEAGRAMGLVDDARWDAFSRKRDAV 481 Query: 472 NFLRSLLKSLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPD---- 524 + LKS + + + S + K + ++ L PD L S+ Sbjct: 482 SRETERLKSTWVNPRIVTPEESERVLGKSIEREYNLFDLLRRPDVGYGKLMSLNEGRYAS 541 Query: 525 -------ARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALS 577 S+ V+E+++I + YA Y RQ E + E +P + DY +PALS Sbjct: 542 ADVQPDVLGDLSASVVEQVEIAAKYAGYIDRQKDEVQRAAHFENLRLPAELDYMQVPALS 601 Query: 578 NELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 E+++ L +P L QAS++ G+TPAA++LL++++KK + Sbjct: 602 FEVRQSLQKHRPETLGQASRMSGVTPAAISLLMVHLKKGGFR 643 >gi|110807565|ref|YP_691085.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Shigella flexneri 5 str. 8401] gi|110617113|gb|ABF05780.1| glucose-inhibited division [Shigella flexneri 5 str. 8401] Length = 602 Score = 789 bits (2039), Expect = 0.0, Method: Composition-based stats. Identities = 277/597 (46%), Positives = 379/597 (63%), Gaps = 5/597 (0%) Query: 27 LGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVLNVK 86 +G T L+TH T+G MSCNPAIGG+GKGHLV+E+DAL GLM + D AGIQFR+LN Sbjct: 1 MGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRILNAS 60 Query: 87 KGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIR 146 KGPAVR R QADR YR A++ + +Q NL + Q V E + + V Q R Sbjct: 61 KGPAVRATRAQADRVRYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGLKFR 120 Query: 147 CSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFDFDTGRLKTGTPARLDG 206 VVLT GTFL G IHIG GR GD PS L + GRLKTGTP R+D Sbjct: 121 AKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRRLRELPLRVGRLKTGTPPRIDA 180 Query: 207 KTIIWDKTEKQFADERLIPFSFMTDK-ITNRQIECGITRTNLETHRIIMENIKHSAIYSG 265 +TI + +Q D + FSFM + + +Q+ C IT TN +TH +I N+ S +Y+G Sbjct: 181 RTIDFSVLAQQHGDNPMPVFSFMGNASLHPQQVPCYITHTNEKTHDVIRSNLDRSPMYAG 240 Query: 266 DIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRT 325 I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ +YPNGIST+LP ++Q Q +R+ Sbjct: 241 VIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNEIYPNGISTSLPFDVQMQIVRS 300 Query: 326 IPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGYEEAAAQGLVA 385 + G+E I+RPGYAIEYD+ +P++L PTLE+K I GLF AGQINGTTGYEEAAAQGL+A Sbjct: 301 MQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLFFAGQINGTTGYEEAAAQGLLA 360 Query: 386 GINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNR 445 G+N+AR S + +R+ +Y+GV++DDL + G EPYRMFTSRAEYR+ LR DNAD R Sbjct: 361 GLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPYRMFTSRAEYRLMLREDNADLR 420 Query: 446 LTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLSSTSISFK---QDGKTR 502 LT IG +LG + + R RF + ++ R LKS +T ++ ++ + Sbjct: 421 LTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVTPSAEAAAEVNAHLTAPLSREA 480 Query: 503 TAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQIESSYAAYTGRQMIEAKEIKFEEK 561 + + L P+ + + L ++ P A E+++I+ Y Y RQ E ++ E Sbjct: 481 SGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQVKYEGYIARQQDEIEKQLRNEN 540 Query: 562 RLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTV 618 L+P DY + LSNE+ KL+ KP ++ QAS+I G+TPAA+++LL+++KK + Sbjct: 541 TLLPATLDYRQISGLSNEVIAKLNDHKPASIGQASRISGVTPAAISILLVWLKKQGM 597 >gi|326390369|ref|ZP_08211928.1| glucose inhibited division protein A [Thermoanaerobacter ethanolicus JW 200] gi|325993646|gb|EGD52079.1| glucose inhibited division protein A [Thermoanaerobacter ethanolicus JW 200] Length = 633 Score = 789 bits (2038), Expect = 0.0, Method: Composition-based stats. Identities = 274/622 (44%), Positives = 386/622 (62%), Gaps = 4/622 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDV+V+G GHAG EAA A+LG T +I M+CNP+IGG K LVREIDA Sbjct: 7 EYDVVVVGLGHAGSEAALACARLGLKTVGFAVNLDSIALMACNPSIGGPAKAQLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D + +Q R LN KGPAVR R Q D++LY++ M+ + QENLD+ Q E+ Sbjct: 67 LGGEMAINTDKSLLQIRTLNTSKGPAVRSLRAQVDKKLYQMNMKYTLERQENLDIKQAEI 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E N ++ +V + ++ +C ++TTGTFL+G + IG + +G G P+N L Sbjct: 127 VDILVEDNKVTGVVTKLGAIYKCKACIITTGTFLKGRVIIGDVSFNSGPSGLFPANELSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + + F R KTGTPAR+D ++I + K E Q DE + PFS+M DKI Q+ C +T Sbjct: 187 TLKRLGFKLMRFKTGTPARVDKRSIDFSKMEIQPGDEVITPFSYMHDKIEIEQLPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH IIM NI S ++SG+I G RYCPSIEDK+V+F + HQIF+EPEGLNT Sbjct: 247 TNKRTHEIIMANIDRSPLFSGEITGVGVRYCPSIEDKVVKFPHKERHQIFIEPEGLNTYE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+S++LPE++Q +F+RT+PGLE V ++RP YAIEYD I+P +L TLE+KKI GL+ Sbjct: 307 MYVQGMSSSLPEDVQLEFLRTVPGLENVRVMRPAYAIEYDCIDPTQLKATLESKKIEGLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ+NGT+GYEEAAAQGL+AGIN+A K + R+ +YIGV+IDDL +KG EPY Sbjct: 367 FAGQVNGTSGYEEAAAQGLMAGINAAMKLLNEPPVILDRSQAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSRAEYR+ LR DNAD RLT +G K+G + E R ++F K + L +++ Sbjct: 427 RMLTSRAEYRLLLRQDNADFRLTELGYKIGLVTEERYQKFLKKKIQLEKEMQRLPGVMVR 486 Query: 485 SKNLSSTSISFKQDGKTRT---AYEFLSYPDFSIQNLFSICPDAR-KFSSLVIERLQIES 540 + + K T Y L P+ ++ + D V E++ I Sbjct: 487 PSEEVNNFLISKGSTPLVTGIDLYTLLKRPEIDYKSTKFLDKDRPHDILDSVAEQIDINI 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y +Q+ + + K E + IP+D DY + LSNE KEKL+ ++P ++ QAS+I G Sbjct: 547 KYEGYIIKQLRQVEHFKALENKKIPEDIDYYQIHGLSNEAKEKLTKIRPTSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTVKLNE 622 ++PA +++LLIY+++ ++ Sbjct: 607 VSPADISVLLIYMQQLRRNKDD 628 >gi|317401627|gb|EFV82253.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Achromobacter xylosoxidans C54] Length = 639 Score = 789 bits (2038), Expect = 0.0, Method: Composition-based stats. Identities = 294/625 (47%), Positives = 395/625 (63%), Gaps = 13/625 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R +DVIV+GGGHAG EAA AA+ GA T L+TH T+G MSCNP+IGG+GKGHLV+E+D Sbjct: 5 REFDVIVVGGGHAGTEAALAAARTGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q Sbjct: 65 ALGGAMALATDEAGIQFRILNGSKGPAVRATRAQADRVLYRKAIRGRLENQPNLWLFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + + V Q R TVVLT GTFL G+IH+G GR GD P+ SL Sbjct: 125 VEDLMVEGDRVVGAVTQVGLKFRAKTVVLTAGTFLNGLIHVGLQNYSGGRAGDPPAISLG 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTD-KITNRQIECG 241 + GRLKTGTP R+DG++I + E+Q D IP FS+M + RQ+ C Sbjct: 185 QRLKELQLPQGRLKTGTPPRIDGRSINYGILEEQPGDLDPIPVFSYMGSVAMHPRQLPCW 244 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT TN TH II + S +YSG I+ GPRYCPSIEDKI RF ++ HQ+FLEPEGL+ Sbjct: 245 ITHTNARTHDIIRGGLDRSPMYSGVIEGVGPRYCPSIEDKIHRFADKESHQVFLEPEGLD 304 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T VYPNG+ST+LP ++Q I ++PGLE +I+RPGYAIEYDY +P+ L TLETK I+ Sbjct: 305 THEVYPNGVSTSLPFDVQLALIHSLPGLENAHILRPGYAIEYDYFDPRGLKSTLETKAIA 364 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GL+ AGQINGTTGYEEAAAQGL+AG+N+A + + R ++Y+GV++DDL ++GV Sbjct: 365 GLYFAGQINGTTGYEEAAAQGLLAGVNAALSALDREQWTPRRDEAYLGVLVDDLVTRGVT 424 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F + LKS Sbjct: 425 EPYRMFTSRAEYRLSLREDNADLRLTEIGRQLGIVDDARWDAFNRKRDAVAAEVERLKSS 484 Query: 482 VLTSK---NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFS--------ICPDARKFSS 530 + + + + K + + + L P+ S + L + + Sbjct: 485 WVNPRVLPQEVAEPLLGKAIEREYSLADLLKRPNVSYEALMAARNTDGTLLAGPGVAADE 544 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 ++ E+++I+ YA Y RQ E ++ E++ IP D DY ++ +LS E+++KL +P Sbjct: 545 VLAEQVEIQVKYAGYIARQQDEVQKQIAHEQQPIPADVDYDAVTSLSFEVRQKLKTHRPE 604 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 + QA +I G+TPAA++LLLI++K+ Sbjct: 605 TIGQAGRISGVTPAAISLLLIHLKR 629 >gi|209696454|ref|YP_002264385.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Aliivibrio salmonicida LFI1238] gi|238058373|sp|B6EHU8|MNMG_ALISL RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|208010408|emb|CAQ80754.1| glucose inhibited division protein [Aliivibrio salmonicida LFI1238] Length = 629 Score = 789 bits (2038), Expect = 0.0, Method: Composition-based stats. Identities = 283/615 (46%), Positives = 388/615 (63%), Gaps = 5/615 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 ++DVIVIGGGHAG EAA AA+ G T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 YQENFDVIVIGGGHAGTEAALAAARTGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DAL GLM D +GIQFR LN KGPAVR R QADR LY+ ++ + +Q NL + Q Sbjct: 63 VDALGGLMAEAIDHSGIQFRTLNASKGPAVRATRAQADRALYKTYVRSVLENQPNLTLFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E + + V Q R +VVLT GTFL G IHIG GR GD S + Sbjct: 123 QAVDDLIIENDKVIGAVTQMGLKFRAKSVVLTAGTFLGGQIHIGMENFSGGRAGDPSSIT 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IEC 240 L F RLKTGTP R+D +++ + E Q D FSF+ ++ + Q + C Sbjct: 183 LAQRLRDRPFRIDRLKTGTPPRIDARSVDFSNLEAQPGDNPTPVFSFLGNRQQHPQQVNC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH +I +N+ S +Y+G I+ GPRYCPSIEDK++RF +++ HQIF+EPEGL Sbjct: 243 FITHTNEKTHDVIRKNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKDSHQIFIEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T +YPNGIST+LP ++Q Q +R++ G E +I+RPGYAIEYD+ +P++L T ETK I Sbjct: 303 TTHELYPNGISTSLPFDVQLQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKATYETKFI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQINGTTGYEEAAAQGL+AG+N++ S + R ++Y+GV+IDDL++ G Sbjct: 363 EGLFFAGQINGTTGYEEAAAQGLMAGLNASLFSQGKEGWSPRRDEAYMGVLIDDLSTLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+SLR DNAD RLT G +LG + + R RF + ++ R LK Sbjct: 423 KEPYRMFTSRAEYRLSLREDNADLRLTEQGRELGLVDDIRWSRFNEKVENIEKERQRLKD 482 Query: 481 LVL--TSKNLSSTSISFK-QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVI-ERL 536 + + TS+N+ + K + + + L P+ + +L +I E++ Sbjct: 483 IWINPTSENIDQVNSILKTPIVREASGEDLLRRPEVTYSSLMTIEKFGPASDDQQASEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I++ YA Y RQ E ++ E +P D +Y+ + LSNE+ KLS KP ++ AS Sbjct: 543 EIQTKYAGYIQRQRDEIEKSLRHENTKLPFDLEYNKVKGLSNEVVAKLSDAKPESIGIAS 602 Query: 597 KIEGMTPAALNLLLI 611 +I G+TPAA+++LL+ Sbjct: 603 RISGITPAAISILLV 617 >gi|241664777|ref|YP_002983137.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ralstonia pickettii 12D] gi|240866804|gb|ACS64465.1| glucose inhibited division protein A [Ralstonia pickettii 12D] Length = 649 Score = 789 bits (2038), Expect = 0.0, Method: Composition-based stats. Identities = 286/632 (45%), Positives = 386/632 (61%), Gaps = 15/632 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNP+IGG+GKGHLV+E+DA Sbjct: 6 EFDVIVVGGGHAGTEAALAAARMGCQTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 66 LGGAMAIATDEGGIQFRILNSSKGPAVRATRAQADRVLYKAAIRHRLENQPNLMLFQQAV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + V Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 126 EDLLVEGDRVVGAVTQVGVQFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSA 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTD-KITNRQIECGI 242 + GRLKTGTP R+DG++I + E+Q D +P FSFM ++ RQ+ C + Sbjct: 186 RLKELKLPQGRLKTGTPPRIDGRSINFSVLEEQPGDLDPVPVFSFMGRAEMHPRQVPCWV 245 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T Sbjct: 246 THTNERTHDIIRAGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLTT 305 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + YPNG+ST+LP ++Q I ++ GLE I+RPGYAIEYDY +P+ L +LE+K ISG Sbjct: 306 NEFYPNGVSTSLPFDVQLDLIHSMRGLENAYILRPGYAIEYDYFDPRALKASLESKAISG 365 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AGIN+ ++ D R +Y+GV++DDL ++GV E Sbjct: 366 LFFAGQINGTTGYEEAAAQGLLAGINAGQQVQGKDAWTPRRDQAYLGVLVDDLITRGVTE 425 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAE+R+SLR DNAD RLT +G LG + + R F + + LKS Sbjct: 426 PYRMFTSRAEFRLSLREDNADMRLTEVGRALGVVDDARWDAFNRKRDAVSRETERLKSTW 485 Query: 483 LTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI----------CPDARKFS 529 + L + + K + + L P+ + + L + + + Sbjct: 486 VNPATLPLEDAEPVLGKGIEREYALADLLRRPNVTYETLMGMQGGKYALEAPLAEDPLLA 545 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 + E+++I Y Y RQ E + + E +P DFDYS + LS E+++KL+ KP Sbjct: 546 EQIREQVEIGIKYHGYIARQADEVERLGANENTRLPADFDYSQVRGLSIEVQQKLAKHKP 605 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKKNTVKLN 621 + QAS+I G+TPAA++LLL+++KK ++ Sbjct: 606 ETIGQASRISGITPAAVSLLLVHLKKGVLRGQ 637 >gi|254851887|ref|ZP_05241235.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes FSL R2-503] gi|254992367|ref|ZP_05274557.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes FSL J2-064] gi|300763432|ref|ZP_07073430.1| glucose-inhibited division protein A [Listeria monocytogenes FSL N1-017] gi|258605182|gb|EEW17790.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes FSL R2-503] gi|300515709|gb|EFK42758.1| glucose-inhibited division protein A [Listeria monocytogenes FSL N1-017] Length = 629 Score = 789 bits (2038), Expect = 0.0, Method: Composition-based stats. Identities = 264/619 (42%), Positives = 375/619 (60%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+G GHAG EA + ++GA T ++T + M CNP++GG KG +VREIDA Sbjct: 8 TFDVIVVGAGHAGVEAGLASGRMGAKTLMLTINLDMVAFMPCNPSVGGPAKGVVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ M+ I +EN+ + QG V Sbjct: 68 LGGEMGRNTDKTYIQMRMLNTGKGPAVRALRAQADKWDYQHEMKHTIEKEENITLRQGLV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ ++ TVV+TTGTF RG I +G+L+ +G PS L Sbjct: 128 DRLVIEDGVCKGVITNSGAIYYAKTVVITTGTFSRGEIIVGELRYSSGPNNQQPSVKLSE 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F R KTGTP R+ TI + KTE+Q D+ FSF T ++ Q+ C +T Sbjct: 188 HLEELGFGLRRFKTGTPPRVKSSTIDYSKTEEQPGDDHPRAFSFDTVEMLLDQLPCWLTY 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +++ K G RYCPSIEDKIVRF ++ HQIFLEPEG NT+ Sbjct: 248 TNETTHEIIQANLHRSPMFTATKKGTGARYCPSIEDKIVRFSDKPRHQIFLEPEGKNTEE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPEE+Q + +RTIPGLE V ++R GYAIEYD + P +L+P+LETK + GLF Sbjct: 308 VYVQGLSTSLPEEVQREMLRTIPGLENVEMMRVGYAIEYDAVMPDQLWPSLETKLVEGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+ARK + + + R +YIGV+IDDL +KG EPY Sbjct: 368 TAGQINGTSGYEEAAGQGLMAGINAARKVFEKEPVILGRDQAYIGVLIDDLVTKGTEEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT IG ++G I + R +RF + L+ + Sbjct: 428 RLLTSRAEYRLLLRHDNADLRLTEIGHEIGLISDERYERFLAKQSAIEAEKERLQKTRIK 487 Query: 485 SKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 L +DG A + L P+ + + I + + E+++I+ Sbjct: 488 PTAEVQAMLKEIGSGELKDGI--LAADLLRRPEITYDKIAQIVSRETFVTDEIAEQVEIQ 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + ++ +++K E + IP++ DY ++ L+ E EKL ++P ++ QAS+I Sbjct: 546 IKYEGYIQKSNLQVEKMKRMEDKKIPENIDYDAISGLATEALEKLKKIEPLSIAQASRIS 605 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 606 GVNPADISILLVYIEQGKI 624 >gi|83746959|ref|ZP_00944005.1| Putative tRNA (5-carboxymethylaminomethyl-2-thiouridylate) synthase subunit GidA [Ralstonia solanacearum UW551] gi|207744823|ref|YP_002261215.1| trna uridine 5-carboxymethylaminomethyl modification enzyme gida(glucose-inhibited division protein a) [Ralstonia solanacearum IPO1609] gi|83726379|gb|EAP73511.1| Putative tRNA (5-carboxymethylaminomethyl-2-thiouridylate) synthase subunit GidA [Ralstonia solanacearum UW551] gi|206596233|emb|CAQ63160.1| trna uridine 5-carboxymethylaminomethyl modification enzyme gida(glucose-inhibited division protein a) [Ralstonia solanacearum IPO1609] Length = 647 Score = 789 bits (2038), Expect = 0.0, Method: Composition-based stats. Identities = 285/630 (45%), Positives = 386/630 (61%), Gaps = 15/630 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNP+IGG+GKGHLV+E+DA Sbjct: 6 EFDVIVVGGGHAGTEAALAAARMGCQTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 66 LGGAMALATDEGGIQFRILNSSKGPAVRATRAQADRVLYKAAIRHRLENQPNLMLFQQAV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + V Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 126 EDLLVEGDRVVGAVTQVGVRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSA 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTD-KITNRQIECGI 242 + GRLKTGTP R+DG+TI + E+Q D +P FSF+ + RQ+ C + Sbjct: 186 RLKELKLPQGRLKTGTPPRIDGRTIDFSVLEEQPGDLDPVPVFSFLGRADMHPRQVPCWV 245 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T Sbjct: 246 THTNEHTHDIIRAGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLTT 305 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + YPNG+ST+LP ++Q I ++ GLE +I+RPGYAIEYDY +P+ L +LE+K I+G Sbjct: 306 NEFYPNGVSTSLPFDVQLDLIHSMRGLENAHILRPGYAIEYDYFDPRGLKASLESKAIAG 365 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AGIN+ + + R +Y+GV++DDL ++GV E Sbjct: 366 LFFAGQINGTTGYEEAAAQGLLAGINAGLQVQGKEAWTPRRDQAYLGVLVDDLVTRGVTE 425 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAE+R+SLR DNAD RLT G LG + + R F + + LKS Sbjct: 426 PYRMFTSRAEFRLSLREDNADMRLTEAGRSLGVVDDARWDAFNRKRDAVSRETERLKSTW 485 Query: 483 LTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLF-----SICPDA-----RKFS 529 + L + + K + + + L P+ + ++L P+A + Sbjct: 486 VNPAILPAADAEPVLGKGIEREYSLADLLRRPNVTYESLMGMQGGKYAPEAPLDDEPLLA 545 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 + E+++I Y Y RQ E + + E +P DFDY + LS E+++KL+ KP Sbjct: 546 EQIREQIEIGIKYHGYIARQADEVERLGASENTRLPADFDYKQVRGLSIEVQQKLAQHKP 605 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 + QAS+I G+TPAA++LLL+++KK ++ Sbjct: 606 ETIGQASRISGITPAAVSLLLVHLKKGVLR 635 >gi|125974849|ref|YP_001038759.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium thermocellum ATCC 27405] gi|256003894|ref|ZP_05428881.1| glucose inhibited division protein A [Clostridium thermocellum DSM 2360] gi|281418696|ref|ZP_06249715.1| glucose inhibited division protein A [Clostridium thermocellum JW20] gi|166222929|sp|A3DHY7|MNMG_CLOTH RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|125715074|gb|ABN53566.1| glucose inhibited division protein A [Clostridium thermocellum ATCC 27405] gi|255992232|gb|EEU02327.1| glucose inhibited division protein A [Clostridium thermocellum DSM 2360] gi|281407780|gb|EFB38039.1| glucose inhibited division protein A [Clostridium thermocellum JW20] gi|316941971|gb|ADU76005.1| glucose inhibited division protein A [Clostridium thermocellum DSM 1313] Length = 630 Score = 789 bits (2038), Expect = 0.0, Method: Composition-based stats. Identities = 273/624 (43%), Positives = 388/624 (62%), Gaps = 7/624 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDV V+G GHAGCEAA AA+LG T + +I +M CNP IGG KGHLVREIDA Sbjct: 7 EYDVAVVGAGHAGCEAALAAARLGVKTVVFAINLDSIANMPCNPNIGGTAKGHLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ AD IQ ++LN KGPAV R Q DR Y++ M+ + QENLDV Q E+ Sbjct: 67 LGGEMGKNADKTFIQSKILNSAKGPAVYSLRAQVDRRSYQIEMKNTLEKQENLDVKQAEI 126 Query: 125 AGFNTE----KNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 + K + + ++ + V+L TGT+L+G I IG + G G P+N Sbjct: 127 VEILYDEVEGKKTVRGVKTHTGAIYKSKVVILATGTYLKGKIIIGDVSYSGGPDGLFPAN 186 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 L +S + + R KTGTPAR++ ++I + K E+Q DER++PFSF ++I Q+ C Sbjct: 187 KLSDSLREMGIELMRFKTGTPARVNRRSIDFSKMEEQPGDERIVPFSFENEEIKKEQVSC 246 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +T TN ETHRII EN+ S ++ G I+ GPRYCPSIEDK+VRF ++ HQ+F+EP GL Sbjct: 247 YLTYTNSETHRIIRENLHRSGLFGGLIEGIGPRYCPSIEDKVVRFSDKESHQVFVEPMGL 306 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 NT +Y G+ST+LPE++Q + +RTIPGLE V+I+R YAIEYD INP +L +LE + + Sbjct: 307 NTQEMYLQGMSTSLPEDVQIEMLRTIPGLENVSIMRNAYAIEYDCINPTQLKLSLELRDV 366 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQINGT+GYEEAAAQG++AGIN+ARK L+ + R+ +YIGV+IDD+ +KG Sbjct: 367 EGLFTAGQINGTSGYEEAAAQGIIAGINAARKIKGLEPLILDRSQAYIGVLIDDIVTKGT 426 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRM TSRAEYR+ LR DNAD RLTPIG ++G I E R ++F + + +K Sbjct: 427 NEPYRMMTSRAEYRLLLRQDNADLRLTPIGYEVGLISEERYRKFEEKRRLIEQEIERVKK 486 Query: 481 LVLTSKNLSSTSISFKQDGKTRT---AYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 + + + ++ + L P+ L I + S V E++ Sbjct: 487 TNIAPTEKVNEFLKKHNSTPIKSGVKLADLLRRPELDYDTLAEIDENRPDLSFAVREQVS 546 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I Y Y RQM + ++ K E+R + KD +Y + L E ++KL+ +KP ++ QAS+ Sbjct: 547 ISIKYEGYIKRQMQQVEQFKKLEERKLDKDINYDEIKGLRLEARQKLNKIKPESVGQASR 606 Query: 598 IEGMTPAALNLLLIYIKKNTVKLN 621 I G++PA +++LL+Y+++ + + Sbjct: 607 ISGVSPADISVLLVYLEQRKRQKS 630 >gi|297545651|ref|YP_003677953.1| glucose inhibited division protein A [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296843426|gb|ADH61942.1| glucose inhibited division protein A [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 633 Score = 789 bits (2037), Expect = 0.0, Method: Composition-based stats. Identities = 271/622 (43%), Positives = 384/622 (61%), Gaps = 4/622 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDV V+G GHAG EAA A+LG T +I M+CNP+IGG K LVREIDA Sbjct: 7 EYDVAVVGLGHAGSEAALACARLGLKTVGFAVNLDSIALMACNPSIGGPAKSQLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D + +Q R LN KGPAVR R Q D++LY+ M+ + Q+NLD+ Q E+ Sbjct: 67 LGGEMAINTDKSLLQIRTLNTSKGPAVRSLRAQVDKKLYQANMKYTLERQQNLDIKQAEI 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E N ++ +V + ++ +C ++TTGTFL+G + IG + +G G P+N L Sbjct: 127 VDILVEDNKVTGVVTKLGAIYKCKACIITTGTFLKGRVIIGDVSFESGPSGLFPANELSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + + F R KTGTPAR+D ++I + K E Q DE + PFS+M DKI Q+ C +T Sbjct: 187 TLKRLGFKLMRFKTGTPARVDKRSIDFSKMEMQPGDEVITPFSYMHDKIEIEQLPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH IIM NI S ++SG+I G RYCPSIEDK+V+F + HQIF+EPEGLNT Sbjct: 247 TNKRTHEIIMANIDRSPLFSGEITGVGVRYCPSIEDKVVKFPHKERHQIFIEPEGLNTYE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+S++LPE++Q +F+RT+PGLE V ++RP YAIEYD I+P +L TLE+KKI GL+ Sbjct: 307 MYVQGMSSSLPEDVQLEFLRTVPGLENVRVMRPAYAIEYDCIDPTQLKATLESKKIEGLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ+NGT+GYEEAAAQGL+AGIN+A K + R+ +YIGV+IDDL +KG EPY Sbjct: 367 FAGQVNGTSGYEEAAAQGLMAGINAAMKLLNKPPVILDRSQAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSRAEYR+ LR DNAD RLT +G ++G + E R ++F K + L +V+ Sbjct: 427 RMLTSRAEYRLLLRQDNADLRLTELGYEIGLVTEERYEKFLKKKIQLEKEMKRLAGVVIK 486 Query: 485 SKNLSSTSISFKQDGKTRT---AYEFLSYPDFSIQNLFSICPDAR-KFSSLVIERLQIES 540 + + + T Y L P+ ++ + V E++ I Sbjct: 487 PSEEVNNFLISRGSTPLVTGVDLYTLLKRPEIDYKSTKFLDKQRPDDILESVAEQIDINI 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y +Q+ + + K E + IP++ DY +P LSNE KEKL+ ++P ++ QAS+I G Sbjct: 547 KYEGYILKQLRQIEHFKALENKKIPENIDYYQIPGLSNEAKEKLTKIRPTSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTVKLNE 622 ++PA +++LLIY+++ ++ Sbjct: 607 VSPADISVLLIYMEQLRRNKSD 628 >gi|311109650|ref|YP_003982503.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Achromobacter xylosoxidans A8] gi|310764339|gb|ADP19788.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Achromobacter xylosoxidans A8] Length = 639 Score = 789 bits (2037), Expect = 0.0, Method: Composition-based stats. Identities = 294/625 (47%), Positives = 396/625 (63%), Gaps = 13/625 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R +DVIV+GGGHAG EAA AA+ GA T L+TH T+G MSCNP+IGG+GKGHLV+E+D Sbjct: 5 REFDVIVVGGGHAGTEAALAAARTGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q Sbjct: 65 ALGGAMALATDEAGIQFRILNGSKGPAVRATRAQADRVLYRKAIRGRLENQPNLWLFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + + V Q R +VVLT GTFL G+IH+G GR GD P+ SL Sbjct: 125 VEDLMVEGDRVVGAVTQIGLQFRAKSVVLTAGTFLNGLIHVGLQNYSGGRAGDPPAVSLG 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDK-ITNRQIECG 241 + GRLKTGTP R+DG++I + E+Q D IP FS+M + + RQ+ C Sbjct: 185 QRLKELKLPQGRLKTGTPPRIDGRSINYSILEEQPGDLNPIPVFSYMGNVGMHPRQLPCW 244 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT TN TH II + S +YSG I+ GPRYCPSIEDKI RF ++ HQ+FLEPEGL+ Sbjct: 245 ITHTNARTHDIIRGGLDRSPMYSGVIEGVGPRYCPSIEDKIHRFADKESHQVFLEPEGLD 304 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T VYPNG+ST+LP ++Q I ++PGLE +I+RPGYAIEYDY +P+ L TLETK I Sbjct: 305 THEVYPNGVSTSLPFDVQLALIHSLPGLENAHILRPGYAIEYDYFDPRGLKSTLETKAIG 364 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GL+ AGQINGTTGYEEAAAQGL+AG+N+A + + R ++Y+GV++DDL ++GV Sbjct: 365 GLYFAGQINGTTGYEEAAAQGLLAGVNAALFALDREQWTPRRDEAYLGVLVDDLVTRGVT 424 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F + LKS Sbjct: 425 EPYRMFTSRAEYRLSLREDNADLRLTEIGRRLGIVDDARWDAFNRKRDAVAAEVERLKSS 484 Query: 482 VLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF--------SS 530 + + L + + K + + + L P S + L + Sbjct: 485 WVNPRLLPAEVAEPLLGKAIEREYSLADLLKRPSVSYEALMAARNADGSLLAGPGVVADE 544 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 ++ E+++I+ YA Y RQ +E ++ E++ IP D DY ++ +LS E+++KL +P Sbjct: 545 VLAEQVEIQVKYAGYIDRQQVEVQKQIAHEQQAIPADVDYDAVTSLSFEVRQKLKTHRPE 604 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 + QA++I G+TPAA++LLLI++K+ Sbjct: 605 TVGQAARISGVTPAAISLLLIHLKR 629 >gi|164686453|ref|ZP_02210481.1| hypothetical protein CLOBAR_00018 [Clostridium bartlettii DSM 16795] gi|164604464|gb|EDQ97929.1| hypothetical protein CLOBAR_00018 [Clostridium bartlettii DSM 16795] Length = 631 Score = 789 bits (2037), Expect = 0.0, Method: Composition-based stats. Identities = 266/617 (43%), Positives = 379/617 (61%), Gaps = 3/617 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAGCEAA +A++G T ++T +IG M CNP+IGG GKG LV+EIDA Sbjct: 8 NYDVIVVGAGHAGCEAALASARMGCKTLMVTLTLDSIGMMPCNPSIGGTGKGQLVKEIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG D IQ R+LN KGPAV R QAD+ Y M++ + ++ NL+++ EV Sbjct: 68 LGGEMGVNTDKTFIQSRMLNTAKGPAVHSLRAQADKFKYHTEMKKTLENEPNLEIVMDEV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + +I ++ + VVL TG +L +I+IG++ + G G + L + Sbjct: 128 VDLINDGKVIKGVITRMGCKYHSKAVVLATGVYLNSLIYIGEVTLNEGPNGLGYAEKLTD 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + D R KTGTPAR+ +I + + Q DE++ PFSFM+D + Q+ C + R Sbjct: 188 KLVDLGLDMRRFKTGTPARIHRDSIDFSQMVIQEGDEKITPFSFMSDDLKIDQVPCYLAR 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TNL+TH++IM+NI SA+Y G I S GPRYCPSIEDK+VRF ++ HQ F+EPEGL+T Sbjct: 248 TNLDTHKVIMDNINRSAMYGGKIHSTGPRYCPSIEDKVVRFNDKESHQTFIEPEGLDTKE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y GIST+LP E+Q Q R++ GLE I+RP YAIEYD +NP +L +LE K LF Sbjct: 308 MYIQGISTSLPYEVQIQMYRSMKGLENCKIMRPAYAIEYDCLNPTQLKASLEIKVTENLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ NGT+GYEEAAAQGL+AGIN+ARK + R+++YIGV+IDDL +KG EPY Sbjct: 368 SAGQFNGTSGYEEAAAQGLMAGINAARKIQGKEPFILDRSEAYIGVLIDDLITKGTNEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSRAEYR+ LR DNAD RLT G ++G + R RF LK+ +T Sbjct: 428 RMMTSRAEYRLYLRQDNADMRLTEKGYEIGLASQERYDRFLTKKALVEAELERLKTERVT 487 Query: 485 SKNLSSTSI--SFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA-RKFSSLVIERLQIESS 541 K ++ + + + Y+FL P+ + + L I A + V E+ I S Sbjct: 488 PKEVNELLVEKGASEIKVGLSLYDFLKRPEVTYELLEQIGKAASEEVPYDVKEQCVIMSK 547 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y +Q+ + + K E + + +D DYS++ L E ++KL+ +KP ++ QAS+I G+ Sbjct: 548 YEGYIDKQLKQIDQFKKLENKKLSEDIDYSTIEGLRIEARQKLNDIKPISIGQASRISGV 607 Query: 602 TPAALNLLLIYIKKNTV 618 +PA +++LLIY+++ Sbjct: 608 SPADISVLLIYLEQMRR 624 >gi|330831716|ref|YP_004394668.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Aeromonas veronii B565] gi|328806852|gb|AEB52051.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Aeromonas veronii B565] Length = 636 Score = 788 bits (2036), Expect = 0.0, Method: Composition-based stats. Identities = 280/622 (45%), Positives = 393/622 (63%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +DVIV+GGGHAG EAA AA++G +T L+TH T+G MSCNPAIGG+GKGHLVRE Sbjct: 10 YHEQFDVIVVGGGHAGTEAATAAARMGMNTLLLTHNIDTLGHMSCNPAIGGIGKGHLVRE 69 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DAL G+M R D GIQFR LN KGPAVR R QADR LY+ +++ + + NL + Q Sbjct: 70 VDALGGIMARAIDLGGIQFRTLNSSKGPAVRATRAQADRLLYKAVVRQMLENYPNLKIFQ 129 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 + + ++ +V Q I TVVLT GTFL G+IHIG GR GD PS + Sbjct: 130 QACDDLIMDGDRVAGVVTQSGIRISGKTVVLTVGTFLNGLIHIGMENYKGGRAGDPPSIA 189 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIEC 240 L + RLKTGTP R+D +++ + ++Q D+ FSF+ + + RQ+ C Sbjct: 190 LAQRLRELPLRIDRLKTGTPPRIDARSVDFSVMQEQHGDDPRPVFSFIGNASQHPRQVPC 249 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +T TN TH +I N+ S +Y+G I+ GPRYCPSIEDKI RF ++ HQIF+EPEGL Sbjct: 250 YVTHTNERTHEVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKITRFADKTAHQIFVEPEGL 309 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T +YPNGIST+LP ++Q Q +R++ G E +I RPGYAIEYD+ +P++L +E+K I Sbjct: 310 TTHELYPNGISTSLPFDVQVQIVRSVRGFENAHITRPGYAIEYDFFDPRDLKANMESKCI 369 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 LF AGQINGTTGYEEAAAQGL+AG+N+A ++ D R +Y+GVM+DDL++ G Sbjct: 370 PNLFFAGQINGTTGYEEAAAQGLMAGLNAALRAQDKDPWNPRRDQAYMGVMMDDLSTLGT 429 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT IG +LG + + R +F +++ R ++S Sbjct: 430 REPYRMFTSRAEYRLLLREDNADIRLTAIGRELGLVDDERWSKFNAKMEQVELERQRMRS 489 Query: 481 LVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 + ++ S +++ + ++ E L P+ + L I E++ Sbjct: 490 TWIHPQHPSLEAVNALVNTPLTREQSLEELLRRPEVTYDALMDIEGVGPSVTDPAAAEQV 549 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ YA Y RQ E ++ E L+P D DY + LSNE+K KL+ KP + QAS Sbjct: 550 EIQIKYAGYIERQHDEVEKQLRNENTLLPLDLDYREVNGLSNEVKAKLNDAKPQTIGQAS 609 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA+++LL+++KK+ + Sbjct: 610 RISGITPAAISILLVHLKKHGL 631 >gi|207722121|ref|YP_002252559.1| trna uridine 5-carboxymethylaminomethyl modification enzyme [Ralstonia solanacearum MolK2] gi|206587295|emb|CAQ17879.1| trna uridine 5-carboxymethylaminomethyl modification enzyme gida(glucose-inhibited division protein a) [Ralstonia solanacearum MolK2] Length = 647 Score = 788 bits (2036), Expect = 0.0, Method: Composition-based stats. Identities = 285/630 (45%), Positives = 385/630 (61%), Gaps = 15/630 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNP+IGG+GKGHLV+E+DA Sbjct: 6 EFDVIVVGGGHAGTEAALAAARMGCQTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 66 LGGAMALATDEGGIQFRILNSSKGPAVRATRAQADRVLYKAAIRHRLENQPNLMLFQQAV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + V Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 126 EDLLVEGDRVVGAVTQVGVRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSA 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTD-KITNRQIECGI 242 + GRLKTGTP R+DG+TI + E+Q D +P FSF+ + RQ+ C + Sbjct: 186 RLKELKLPQGRLKTGTPPRIDGRTIDFSVLEEQPGDLDPVPVFSFLGRADMHPRQVPCWV 245 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T Sbjct: 246 THTNEHTHDIIRAGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLTT 305 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + YPNG+ST+LP ++Q I ++ GLE +I+RPGYAIEYDY +P+ L +LE+K I+G Sbjct: 306 NEFYPNGVSTSLPFDVQLDLIHSMRGLENAHILRPGYAIEYDYFDPRGLKASLESKAIAG 365 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AGIN+ + R +Y+GV++DDL ++GV E Sbjct: 366 LFFAGQINGTTGYEEAAAQGLLAGINAGLHVQGKEAWTPRRDQAYLGVLVDDLITRGVTE 425 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAE+R+SLR DNAD RLT G LG + + R F + + LKS Sbjct: 426 PYRMFTSRAEFRLSLREDNADMRLTEAGRSLGVVDDTRWDAFNRKRDAVSRETERLKSTW 485 Query: 483 LTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLF-----SICPDA-----RKFS 529 + L + + K + + + L P+ + ++L P+A + Sbjct: 486 VNPAILPTADAEPVLGKGIEREYSLADLLRRPNVTYESLMGMQGGKYAPEAPLDDEPLLA 545 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 + E+++I Y Y RQ E + + E +P DFDY + LS E+++KL+ KP Sbjct: 546 EQIREQIEIGIKYHGYIARQADEVERLGASENTRLPADFDYKQVRGLSIEVQQKLAQHKP 605 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 + QAS+I G+TPAA++LLL+++KK ++ Sbjct: 606 ETIGQASRISGITPAAVSLLLVHLKKGVLR 635 >gi|288942767|ref|YP_003445007.1| glucose inhibited division protein A [Allochromatium vinosum DSM 180] gi|288898139|gb|ADC63975.1| glucose inhibited division protein A [Allochromatium vinosum DSM 180] Length = 628 Score = 788 bits (2036), Expect = 0.0, Method: Composition-based stats. Identities = 292/622 (46%), Positives = 402/622 (64%), Gaps = 5/622 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + +YDVIV+GGGHAG EAA AA+ G T L+T T+G MSCNPAIGG+GKGHLVR Sbjct: 2 LASDTYDVIVVGGGHAGTEAALAAARCGVRTLLLTQNIETLGQMSCNPAIGGIGKGHLVR 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL GLM R AD AGIQFR+LN KGPAVR R QADR+LYR A++ + +Q L + Sbjct: 62 EIDALGGLMARAADRAGIQFRILNASKGPAVRATRAQADRQLYRAAVRTALENQPGLAIF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E ++ + Q R VVLT GTFL G IH+G GR GD PSN Sbjct: 122 QQSVEDLLVEGERVAGVRTQMGLEFRARAVVLTVGTFLGGRIHVGLSNYEGGRAGDPPSN 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIE 239 L + F RLKTGTP R+D ++I + + +Q D+ + FSF+ + RQ+ Sbjct: 182 GLARRLRELPFRIERLKTGTPPRIDARSIDYSRLAEQPGDDPVPVFSFLGRPEDHPRQVS 241 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT T+ TH II + S +++G I+ GPRYCPSIEDKIVRF +++ HQIFLEPEG Sbjct: 242 CHITHTSERTHDIIRSGLSRSPLFTGVIEGVGPRYCPSIEDKIVRFADKSSHQIFLEPEG 301 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T VYPNGIST+LP +IQ +R+I GLE+ ++ RPGYAIEYD+++P++L P+LET+ Sbjct: 302 LTTHEVYPNGISTSLPYDIQEALVRSIVGLERAHLTRPGYAIEYDFLDPRDLKPSLETRP 361 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 +SGLFLAGQINGTTGYEEA AQGL+AG N+A + + R +SY+GVM+DDL ++G Sbjct: 362 LSGLFLAGQINGTTGYEEAGAQGLLAGANAALQVQGREPWHPRRDESYLGVMVDDLITRG 421 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT IG +LG +G+ + F + R L+ Sbjct: 422 TNEPYRMFTSRAEYRLLLREDNADLRLTEIGRRLGLVGDEQWCAFEHKREAIERERQRLR 481 Query: 480 SLVLTSKNLS---STSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARK-FSSLVIER 535 + + L +T + + + A + L+ P+ + ++ + + + V E+ Sbjct: 482 DTWVRPETLDPTLATQVLGEPLRRESRALDLLARPNVGYAGIRALTGEPPEQVAPEVAEQ 541 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 L+I++ YA Y RQ E + + +E + +P FDY+ + LS E++EKL ++P + QA Sbjct: 542 LEIQTRYAGYIDRQRAEIERQREQELKPLPDSFDYAQVRGLSVEVREKLMRVRPATIGQA 601 Query: 596 SKIEGMTPAALNLLLIYIKKNT 617 ++I G+TPAA++LLLI++K+ Sbjct: 602 ARIPGVTPAAVSLLLIHLKRQA 623 >gi|163751411|ref|ZP_02158636.1| glucose-inhibited division protein A [Shewanella benthica KT99] gi|161328714|gb|EDP99862.1| glucose-inhibited division protein A [Shewanella benthica KT99] Length = 630 Score = 788 bits (2036), Expect = 0.0, Method: Composition-based stats. Identities = 286/622 (45%), Positives = 382/622 (61%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +DVIV+GGGHAG EAA AA++G++T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 FHERFDVIVVGGGHAGTEAALAAARMGSNTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M D AGIQFR LN KGPAVR R QADR LYR +Q+ + +Q NL + Q Sbjct: 63 IDALGGAMAIATDFAGIQFRTLNSSKGPAVRATRAQADRALYRAKIQQILQNQPNLRLFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E + +V Q TVVLT GTFL G IHIG GR GD PS + Sbjct: 123 QGVDDLIVENGRVIGVVTQMGLAFEAPTVVLTAGTFLSGKIHIGLQNYSGGRAGDPPSIA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIEC 240 L + + GRLKTGTP R+D +I +D +Q D L SF+ D K RQ+ C Sbjct: 183 LADRLRELPLRIGRLKTGTPPRIDANSINFDLMTEQKGDTPLPVMSFVGDVKDHPRQVSC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +T TN TH II + S +YSG I+ GPRYCPSIEDKI RF ++ HQIF+EPEGL Sbjct: 243 YVTHTNERTHEIIRGGLDRSPMYSGVIEGIGPRYCPSIEDKINRFADKTSHQIFIEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 NT+ +YPNGIST+LP ++Q +R+I G+E IIRPGYAIEYDY +P++L +LETK I Sbjct: 303 NTNEIYPNGISTSLPFDVQLDLVRSIKGMENAQIIRPGYAIEYDYFDPRDLKKSLETKAI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQINGTTGYEEAAAQGL+AG+N++ + + R +Y+GV++DDL++ G Sbjct: 363 GGLFFAGQINGTTGYEEAAAQGLLAGMNASLQVQGKESWAPRRDQAYLGVLVDDLSTLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT G + G + + R +F+K + L+ Sbjct: 423 KEPYRMFTSRAEYRLLLREDNADLRLTEKGREFGLVDDNRWSQFSKKRESIELELQRLRG 482 Query: 481 LVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 + + ++ + + + + L P+ L + E++ Sbjct: 483 QWVHPNSPLLDVLNPQLNTPISREASFEDLLRRPEMDYPKLMKLEGFGPGLEDQRAAEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 QI+ Y+ Y RQ E + E +P D DY +P LSNE+ K++ KP + QAS Sbjct: 543 QIQIKYSGYIQRQQDEIDKALKHETTGLPLDLDYQEVPGLSNEVIAKMNEYKPETIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I GMTPAA+++LL+++K+ + Sbjct: 603 RISGMTPAAISILLVHLKRRGL 624 >gi|300857410|ref|YP_003782394.1| glucose inhibited division protein A [Clostridium ljungdahlii DSM 13528] gi|300437525|gb|ADK17292.1| glucose inhibited division protein A [Clostridium ljungdahlii DSM 13528] Length = 628 Score = 788 bits (2036), Expect = 0.0, Method: Composition-based stats. Identities = 266/624 (42%), Positives = 385/624 (61%), Gaps = 4/624 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + YDVIV+G GHAGCEA AA++G T + T ++G M CNP +GG KGHLVRE Sbjct: 4 FSEKYDVIVVGAGHAGCEAGLAAARMGCKTLVCTMNLDSVGFMPCNPNVGGTAKGHLVRE 63 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G MG D IQ R+LN KGPAV R QAD++ Y + M+ + Q NL + Q Sbjct: 64 IDALGGEMGVNIDHTFIQSRMLNTSKGPAVHSLRAQADKKNYSVRMKEVLEKQNNLSLRQ 123 Query: 122 GEVAGFNTEKN-IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 EV T+ + ++ ++ + TVVL TGT+L+G + IG + +G G P+N Sbjct: 124 IEVLSIRTDDKGKVCGVLTKNGAYFETKTVVLATGTYLKGKVIIGDVSYSSGPNGFMPAN 183 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 L S + + R KTGTPAR++ +++ + K +Q D++++PFSFM+ + QI C Sbjct: 184 DLSQSLLDLGIELRRFKTGTPARVNKRSVDFSKMIEQPGDKKIVPFSFMSGSLDRSQISC 243 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +T T T ++I +NI S +Y+G IKS GPRYCPSIEDK++RF ++ HQIF+EPEG Sbjct: 244 YLTYTTENTLKVIRDNINRSPLYNGSIKSVGPRYCPSIEDKVMRFPDKEKHQIFIEPEGE 303 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 NTD +Y +G ST++PE++Q RTI GLE V +R GYAIEYD INP +L +LE KK+ Sbjct: 304 NTDELYVDGASTSMPEDVQIAMYRTIAGLENVEFLRTGYAIEYDCINPTQLKLSLEFKKV 363 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQ+NG++GYEEAA+QG++AGIN+A KS + R+D YIGV++DDL +KG Sbjct: 364 EGLFGAGQLNGSSGYEEAASQGIIAGINAALKSQGNPPLILKRSDGYIGVLVDDLVTKGT 423 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRM TSRAEYR+ LR DNAD RLT +G K+G + E R ++ K + +K Sbjct: 424 QEPYRMMTSRAEYRLILRQDNADLRLTELGHKIGLVSEERYGKYLKRKSDIEKEVERIKD 483 Query: 481 LVLTSKNLSS---TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 + +T K SI + KT + YE + P+ + + D + + E + Sbjct: 484 IHITPKKEVVDFLNSIGSSELKKTTSLYELIKRPELDYFKVQPLDVDRPELGEDIQEEVN 543 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I S Y Y +Q+ + + K E ++IP+D +Y + L E +KL ++P ++ QAS+ Sbjct: 544 IISKYEGYIEKQLEQVSQFKKFENKIIPEDINYDKINGLRIEATQKLKKIRPMSVGQASR 603 Query: 598 IEGMTPAALNLLLIYIKKNTVKLN 621 I G++PA +++LLIY++K + + Sbjct: 604 ISGVSPADISVLLIYMEKKYREKD 627 >gi|289579529|ref|YP_003478156.1| glucose inhibited division protein A [Thermoanaerobacter italicus Ab9] gi|289529242|gb|ADD03594.1| glucose inhibited division protein A [Thermoanaerobacter italicus Ab9] Length = 633 Score = 788 bits (2036), Expect = 0.0, Method: Composition-based stats. Identities = 271/622 (43%), Positives = 383/622 (61%), Gaps = 4/622 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDV V+G GHAG EAA A+LG T +I M+CNP+IGG K LVREIDA Sbjct: 7 EYDVAVVGLGHAGSEAALACARLGLKTVGFAVNLDSIALMACNPSIGGPAKSQLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D + +Q R LN KGPAVR R Q D++LY+ M+ + Q+NLD+ Q E+ Sbjct: 67 LGGEMAINTDKSLLQIRTLNTSKGPAVRSLRAQVDKKLYQANMKYTLERQQNLDIKQAEI 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E N ++ +V + ++ +C ++TTGTFL+G + IG + +G G P+N L Sbjct: 127 VDILVEDNKVTGVVTKLGAIYKCKACIITTGTFLKGRVIIGDVSFESGPSGLFPANELSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + + F R KTGTPAR+D ++I + K E Q DE + PFS+M DKI Q+ C +T Sbjct: 187 TLKRLGFKLMRFKTGTPARVDKRSIDFSKMEMQPGDEVITPFSYMHDKIEIEQLPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH IIM NI S ++SG+I G RYCPSIEDK+V+F + HQIF+EPEGLNT Sbjct: 247 TNKRTHEIIMANIDRSPLFSGEITGVGVRYCPSIEDKVVKFPHKERHQIFIEPEGLNTYE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+S++LPE++Q +F+RT+PGLE V ++RP YAIEYD I+P +L TLE+KKI GL+ Sbjct: 307 MYVQGMSSSLPEDVQLEFLRTVPGLENVKVMRPAYAIEYDCIDPTQLKATLESKKIEGLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ+NGT+GYEEAAAQGL+AGIN+A K + R+ +YIGV+IDDL +KG EPY Sbjct: 367 FAGQVNGTSGYEEAAAQGLMAGINAAMKLLNKPPVILDRSQAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSRAEYR+ LR DNAD RLT +G ++G + E R ++F K + L +V+ Sbjct: 427 RMLTSRAEYRLLLRQDNADLRLTELGYEIGLVTEERYEKFLKKKIQLEKEMKRLAGVVIK 486 Query: 485 SKNLSSTSISFKQDGKTRT---AYEFLSYPDFSIQNLFSICPDAR-KFSSLVIERLQIES 540 + + + T Y L P+ ++ + V E++ I Sbjct: 487 PSEEVNNFLISRGSTPLVTGVDLYTLLKRPEIDYKSTKFLDKQRPDDILESVAEQIDINI 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y +Q+ + + K E + IP++ DY +P LSNE KEKL+ ++P ++ QAS+I G Sbjct: 547 KYEGYILKQLRQIEHFKALENKKIPENIDYYQIPGLSNEAKEKLTKIRPTSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTVKLNE 622 ++PA +++LLIY+++ + Sbjct: 607 VSPADISVLLIYMEQLRRNKGD 628 >gi|323705842|ref|ZP_08117414.1| glucose inhibited division protein A [Thermoanaerobacterium xylanolyticum LX-11] gi|323534838|gb|EGB24617.1| glucose inhibited division protein A [Thermoanaerobacterium xylanolyticum LX-11] Length = 623 Score = 788 bits (2035), Expect = 0.0, Method: Composition-based stats. Identities = 271/616 (43%), Positives = 380/616 (61%), Gaps = 4/616 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 YDV VIG GHAGCEAA A+LG T +I M CNP+IGG K +LVREIDAL Sbjct: 8 YDVAVIGLGHAGCEAALATARLGLKTVAFAINLDSIALMPCNPSIGGPAKTNLVREIDAL 67 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D IQ R LN KGPAVR R Q+D++ Y+ M+ + QENLD+ Q EV Sbjct: 68 GGQMAINTDLTLIQQRTLNTSKGPAVRALRAQSDKKRYQFNMKYTLEKQENLDIKQAEVV 127 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + S++ + + C + ++TTGT+LRG I IG + G G P+N L S Sbjct: 128 DIEVEDGQVKSVITKTGARYLCRSCIVTTGTYLRGRIIIGDVSYSGGPNGLFPANELSKS 187 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRT 245 F + + R KTGTPAR+D K+I +D E Q D+++ PFS+M D+I QI C +T T Sbjct: 188 FERLNIRLMRFKTGTPARVDKKSINFDAMEIQPGDDKVTPFSYMHDEINVEQIPCWLTYT 247 Query: 246 NLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVV 305 N +TH +IM+NI S +YSG+IK GPRYCPSIEDK+V+F ++ HQ+F+EPEG +T+ + Sbjct: 248 NTKTHEVIMKNIDRSPLYSGEIKGVGPRYCPSIEDKVVKFPDKLRHQLFIEPEGRDTNEM 307 Query: 306 YPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFL 365 Y G+S+++PE++Q +F+RTI GLE V ++RPGYAIEYD I+P +L +LE K ISGLF Sbjct: 308 YVQGMSSSMPEDVQIEFLRTIKGLENVKVMRPGYAIEYDCIDPTQLKQSLELKTISGLFF 367 Query: 366 AGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYR 425 AGQ+NGT+GYEEAAAQGL+AGIN+A K + R+++YIGV+IDDL +KG EPYR Sbjct: 368 AGQVNGTSGYEEAAAQGLMAGINAAMKHYGREPFILDRSEAYIGVLIDDLVTKGTNEPYR 427 Query: 426 MFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTS 485 M TSRAEYR+ LR DNAD RLT G ++G + + R RF +Y LK+ ++ Sbjct: 428 MLTSRAEYRLILRQDNADFRLTEKGRQIGLVDDERYNRFLMKKDQYEKEMERLKNTMIVP 487 Query: 486 KNLSSTSISFKQDGKT---RTAYEFLSYPDFSIQNLFSICPDAR-KFSSLVIERLQIESS 541 + + + K T Y+ L P+ + I D V ++ I Sbjct: 488 SHDVNEYLKSKGSSPIVTGMTMYDLLKRPEIDYVSSKVIDSDRPDDIRDDVAFQIDINIK 547 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y +QM + ++ K E + IP +Y + +S E ++KL + P ++ QAS+I G+ Sbjct: 548 YEGYIRKQMEQVEKFKALENKKIPSWINYDDIKGISIEARQKLKSIMPTSVGQASRISGV 607 Query: 602 TPAALNLLLIYIKKNT 617 +PA ++++LIY++ Sbjct: 608 SPADISVILIYLQSRR 623 >gi|47095617|ref|ZP_00233225.1| glucose-inhibited division protein A [Listeria monocytogenes str. 1/2a F6854] gi|254830754|ref|ZP_05235409.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes 10403S] gi|254899732|ref|ZP_05259656.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes J0161] gi|254913065|ref|ZP_05263077.1| glucose-inhibited division protein A [Listeria monocytogenes J2818] gi|254937446|ref|ZP_05269143.1| glucose-inhibited division protein A [Listeria monocytogenes F6900] gi|47016047|gb|EAL06972.1| glucose-inhibited division protein A [Listeria monocytogenes str. 1/2a F6854] gi|258610048|gb|EEW22656.1| glucose-inhibited division protein A [Listeria monocytogenes F6900] gi|293591066|gb|EFF99400.1| glucose-inhibited division protein A [Listeria monocytogenes J2818] Length = 629 Score = 788 bits (2035), Expect = 0.0, Method: Composition-based stats. Identities = 264/619 (42%), Positives = 376/619 (60%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+G GHAG EA + ++GA T ++T + M CNP++GG KG +VREIDA Sbjct: 8 TFDVIVVGAGHAGVEAGLASGRMGAKTLMLTINLDMVAFMPCNPSVGGPAKGVVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ M+ I +EN+ + QG V Sbjct: 68 LGGEMGRNTDKTYIQMRMLNTGKGPAVRALRAQADKWDYQHEMKHTIEKEENITLRQGLV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ ++ TVV+TTGTF RG I +G+L+ +G PS L Sbjct: 128 DRLVIEDGVCKGVITNSGAIYYAETVVITTGTFSRGEIIVGELRYSSGPNNQQPSVKLSE 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F+ R KTGTP R+ TI + KTE+Q D+ FSF T ++ Q+ C +T Sbjct: 188 HLEELGFELRRFKTGTPPRVKSSTIDYSKTEEQPGDDHPRAFSFDTVEMLLDQLPCWLTY 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +++ K G RYCPSIEDKIVRF ++ HQIFLEPEG NT+ Sbjct: 248 TNETTHEIIQANLHRSPMFTATKKGTGARYCPSIEDKIVRFSDKPRHQIFLEPEGKNTEE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPEE+Q + +RTIPGLE V ++R GYAIEYD + P +L+P+LETK + GLF Sbjct: 308 VYVQGLSTSLPEEVQREMLRTIPGLENVEMMRVGYAIEYDAVMPDQLWPSLETKLVEGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+ARK + + + R +YIGV+IDDL +KG EPY Sbjct: 368 TAGQINGTSGYEEAAGQGLMAGINAARKVFEKEPVILGRDQAYIGVLIDDLVTKGTEEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT IG ++G I + R +RF + L+ + Sbjct: 428 RLLTSRAEYRLLLRHDNADLRLTEIGHEIGLISDERYERFLAKQSAIEAEKERLQKTRIK 487 Query: 485 SKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 L +DG A + L P+ + + I + + E+++I+ Sbjct: 488 PTAEVQAMLKEIGSGELKDGI--LAADLLRRPEITYDKIAQIVSRETFVTDEIAEQVEIQ 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + ++ +++K E + IP++ DY ++ L+ E EKL ++P ++ QAS+I Sbjct: 546 IKYEGYIQKSNLQVEKMKRMEDKKIPENIDYDAISGLATEALEKLKKIEPLSIAQASRIS 605 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 606 GVNPADISILLVYIEQGKI 624 >gi|323703264|ref|ZP_08114915.1| glucose inhibited division protein A [Desulfotomaculum nigrificans DSM 574] gi|323531729|gb|EGB21617.1| glucose inhibited division protein A [Desulfotomaculum nigrificans DSM 574] Length = 629 Score = 788 bits (2035), Expect = 0.0, Method: Composition-based stats. Identities = 261/619 (42%), Positives = 379/619 (61%), Gaps = 3/619 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDVIV+G GHAGCEA AA++G T ++T + M CNPA+GG K HLV+EIDA Sbjct: 7 DYDVIVVGAGHAGCEAGLAAARMGCKTLVLTLNLDNVALMPCNPAVGGPAKSHLVKEIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG D IQ R+LN KGPAV R QAD+ Y+ M++ + SQ NLD+ Q V Sbjct: 67 LGGQMGINTDLTAIQMRMLNTGKGPAVHALRAQADKLRYQQLMKKTLESQPNLDLKQLLV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + + + + V+LTTGT+L+G I IG + P G + +L Sbjct: 127 EEILVQNGQVRGVATNIGAEFSARAVILTTGTYLKGRIIIGSVYYPGGPNSQHAAMNLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + + GR KTGTPAR+D +T+ + K Q DER+ FSF+ Q+ C +T Sbjct: 187 NLRSLGLELGRFKTGTPARIDRRTVDFSKMTIQPGDERVHNFSFLNPVKHRDQVPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T TH+II +N+ S +YSG I+ GPRYCPSIEDKIVRF ++ HQIF+EPEGL+T Sbjct: 247 TTERTHQIIRDNLHRSPLYSGIIEGVGPRYCPSIEDKIVRFADKPKHQIFIEPEGLSTFE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+ST+LP ++Q + +R+IPGLE+V I+RPGYAIEYDY+ P +L TLE K I GL+ Sbjct: 307 MYVQGMSTSLPPDVQLEMLRSIPGLEQVEIMRPGYAIEYDYVVPTQLKSTLECKNIDGLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAAAQG++AGIN+A K + + SR ++YIGV+IDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAAQGIMAGINAALKIKEKEPFTLSRAEAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ T+RAEYR+ LR DNAD+RLT G +G + E R +++ + L+S V+ Sbjct: 427 RLMTARAEYRLLLRQDNADHRLTQKGYDIGLVTEERYRKYVEKWSAIKNEIDRLQSQVIP 486 Query: 485 SKNLSS---TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 + + + + + A + P+ +++L + D + + V+E ++IE Sbjct: 487 ASEEVNNLLKDLGSSEINQPVPAVNLIRRPEIHLRDLIKLNIDMPQLNDEVLEEVEIEIK 546 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y +Q+ + + + E R + KD DY ++ LS E ++KL KP ++ QAS+I G+ Sbjct: 547 YEGYIKKQLAQVERFEKLESRKLSKDIDYLNIKGLSVEARQKLDKFKPDSIGQASRISGV 606 Query: 602 TPAALNLLLIYIKKNTVKL 620 +PA +++LL+++++ K Sbjct: 607 SPADISVLLVWLEQERRKA 625 >gi|299820855|ref|ZP_07052744.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria grayi DSM 20601] gi|299817876|gb|EFI85111.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria grayi DSM 20601] Length = 641 Score = 788 bits (2035), Expect = 0.0, Method: Composition-based stats. Identities = 265/619 (42%), Positives = 378/619 (61%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAG EA + ++GA T ++T + M CNP++GG KG +VREIDA Sbjct: 19 NYDVIVVGAGHAGVEAGLASGRMGAKTLMLTINLDMVAFMPCNPSVGGPAKGVVVREIDA 78 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ M+ I +EN+ + QG V Sbjct: 79 LGGEMGRNTDKTYIQMRMLNTGKGPAVRALRAQADKWDYQHEMKHTIEKEENITLRQGLV 138 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ + TVV+TTGTF RG I +G+L+ +G PS L Sbjct: 139 EELIIEDGRCVGVITNSGAKYHAKTVVITTGTFSRGEIIVGELRYSSGPNNQQPSVKLSE 198 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F+ R KTGTP R+ +I + KTE+Q DE+ FS+ T + Q+ C +T Sbjct: 199 HLEELGFELRRFKTGTPPRVKSSSIDYTKTEEQPGDEQPQAFSYETVDMLVDQLPCWLTY 258 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH II N+ S +++ K G RYCPSIEDKIVRF ++ HQIFLEPEG NT+ Sbjct: 259 TNEQTHEIINANLHRSPMFTATKKGTGARYCPSIEDKIVRFSDKPRHQIFLEPEGRNTEE 318 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE++Q + ++TIPGLE V ++R GYAIEYD + P +L+PTLETKK+ L+ Sbjct: 319 VYVQGLSTSLPEDVQREMLQTIPGLENVEMMRVGYAIEYDAVMPDQLWPTLETKKVENLY 378 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+ARK+ + + R ++YIGV+IDDL +KG EPY Sbjct: 379 TAGQINGTSGYEEAAGQGLMAGINAARKAMDKEPVILGRNEAYIGVLIDDLVTKGTEEPY 438 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT IG ++G I + R F + + LK + + Sbjct: 439 RLLTSRAEYRLLLRHDNADLRLTEIGHEIGLISDERYAAFKEKQALIADEITRLKKVRIK 498 Query: 485 SKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 L+ + +DG A +FL P+ + + I P S + E+++I+ Sbjct: 499 PTKEVQILLTEMGANELKDGV--LAADFLRRPEITYPIIEQIVPRETSLSDEIKEQVEIQ 556 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + + ++K E + IP++ DY ++ L+ E EKL ++P ++ QAS+I Sbjct: 557 IKYEGYIEKASAQVDKMKRMEDKKIPENIDYDAIGGLATEALEKLKKIEPLSIAQASRIS 616 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 617 GVNPADISILLVYIEQGKI 635 >gi|46908999|ref|YP_015388.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes serotype 4b str. F2365] gi|67460831|sp|Q71VV1|MNMG_LISMF RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|46882272|gb|AAT05565.1| glucose-inhibited division protein A [Listeria monocytogenes serotype 4b str. F2365] Length = 632 Score = 788 bits (2035), Expect = 0.0, Method: Composition-based stats. Identities = 264/619 (42%), Positives = 375/619 (60%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+G GHAG EA + ++GA T ++T + M CNP++GG KG +VREIDA Sbjct: 8 TFDVIVVGAGHAGVEAGLASGRMGAKTLMLTINLDMVAFMPCNPSVGGPAKGVVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ M+ I +EN+ + QG V Sbjct: 68 LGGEMGRNTDKTYIQMRMLNTGKGPAVRALRAQADKWDYQHEMKHTIEKEENITLRQGLV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ ++ TVV+TTGTF RG I +G+L+ +G PS L Sbjct: 128 DRLVIEDGVCKGVITNSGAIYYAKTVVITTGTFSRGEIIVGELRYSSGPNNQQPSVKLSE 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F+ R KTGTP R+ TI + KTE+Q D+ FSF T ++ Q+ C +T Sbjct: 188 HLEELGFELRRFKTGTPPRVKSSTIDYSKTEEQPGDDHPRAFSFDTVEMLLDQLPCWLTY 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +++ K G RYCPSIEDKIVRF ++ HQIFLEPEG NT+ Sbjct: 248 TNETTHEIIQANLHRSPMFTATKKGTGARYCPSIEDKIVRFSDKPRHQIFLEPEGKNTEE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPEE+Q + +RTIPGLE V ++R GYAIEYD + P +L+P+LETK + GLF Sbjct: 308 VYVQGLSTSLPEEVQREMLRTIPGLENVEMMRVGYAIEYDAVMPDQLWPSLETKLVEGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+ARK + + R +YIGV+IDDL +KG EPY Sbjct: 368 TAGQINGTSGYEEAAGQGLMAGINAARKVFAKEPVILGRDQAYIGVLIDDLVTKGTEEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT IG ++G I + R +RF + L+ + Sbjct: 428 RLLTSRAEYRLLLRHDNADLRLTEIGHEIGLISDERYERFLAKQSAIEAEKERLQKTRIK 487 Query: 485 SKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 L +DG A + L P+ + + I + + E+++I+ Sbjct: 488 PTAEVQAMLKEIGSGELKDGI--LAADLLRRPEITYDKIAQIVSRETFVTDEIAEQVEIQ 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + ++ +++K E + IP++ DY ++ L+ E EKL ++P ++ QAS+I Sbjct: 546 IKYEGYIQKSNLQVEKMKRMEDKKIPENIDYDAISGLATEALEKLKKIEPLSIAQASRIS 605 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 606 GVNPADISILLVYIEQGKI 624 >gi|323527852|ref|YP_004230005.1| glucose inhibited division protein A [Burkholderia sp. CCGE1001] gi|323384854|gb|ADX56945.1| glucose inhibited division protein A [Burkholderia sp. CCGE1001] Length = 652 Score = 788 bits (2035), Expect = 0.0, Method: Composition-based stats. Identities = 286/631 (45%), Positives = 389/631 (61%), Gaps = 15/631 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + +DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNP+IGG+GKGHLV+ Sbjct: 2 LFPTEFDVIVVGGGHAGTEAALAAARMGNKTLLLTHNIETLGQMSCNPSIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DAL G M D GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Sbjct: 62 EVDALGGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRLLYKQAIRHRLENQPNLWLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + + V Q R VVLT GTFL G IH+G GR GD + Sbjct: 122 QQAVDDLMVEGDRVVGAVTQVGIRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAV 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITN-RQI 238 SL + GRLKTGTP R+DG+TI + + E+Q D +P FSF+ + RQ+ Sbjct: 182 SLSARLKELKLPQGRLKTGTPPRIDGRTIDFSQLEEQPGDLDPVPVFSFLGRAEQHPRQM 241 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C +T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF + HQIFLEPE Sbjct: 242 PCWVTHTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPE 301 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL T+ YPNGIST+LP ++Q + +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 302 GLTTNEFYPNGISTSLPFDVQLELVRSMRGLEHAHILRPGYAIEYDYFDPRGLKASLETK 361 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 ISGLF AGQINGTTGYEEAAAQGL+AGIN+ + + C R +Y+GV++DDL ++ Sbjct: 362 VISGLFFAGQINGTTGYEEAAAQGLLAGINAGLFVQEKEAWCPRRDQAYLGVLVDDLVTR 421 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 GV EPYRMFTSRAEYR+SLR DNAD RLT IG +LG +G+ R F++ + L Sbjct: 422 GVSEPYRMFTSRAEYRLSLREDNADMRLTEIGRELGVVGDVRWDAFSRKRDAVSRETERL 481 Query: 479 KSLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI------CPDARKFS 529 ++ + K L +T++ K + + L P S + ++ P+ Sbjct: 482 RTTWVNPKTLSAEEATALLGKPIDHEYSLADLLRRPGVSYDGVCALRGGACGAPEILAED 541 Query: 530 S----LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLS 585 + E+++I Y Y RQ E + + E +P DY+ + LS E ++KL+ Sbjct: 542 EVLLAQIKEQIEIGIKYQGYIDRQAGEIERNEAHESTRLPDGLDYAEVRGLSFEARQKLT 601 Query: 586 ILKPFNLLQASKIEGMTPAALNLLLIYIKKN 616 +P + QAS+I G+TPAA++LL++++K+ Sbjct: 602 QYRPETIGQASRISGITPAAISLLMVHLKRG 632 >gi|206890699|ref|YP_002248428.1| glucose-inhibited division protein A [Thermodesulfovibrio yellowstonii DSM 11347] gi|254811520|sp|B5YJL3|MNMG_THEYD RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|206742637|gb|ACI21694.1| glucose-inhibited division protein A [Thermodesulfovibrio yellowstonii DSM 11347] Length = 624 Score = 788 bits (2035), Expect = 0.0, Method: Composition-based stats. Identities = 297/622 (47%), Positives = 393/622 (63%), Gaps = 5/622 (0%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 + +D+IV+G GHAGCEAA AK+G TAL T TI +SCNPAIGGL KGHLVREI Sbjct: 4 EKDFDIIVVGAGHAGCEAALATAKMGLQTALFTIYLETIAQLSCNPAIGGLAKGHLVREI 63 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G+M +V D AGIQFR+LN KGPAV R QADR LY + M++ + S ENL + Q Sbjct: 64 DALGGIMAKVTDMAGIQFRMLNRSKGPAVWSLRAQADRILYNIYMRKILESTENLAIKQA 123 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 V E + I+ V++T GTFL G+IHIG AGR G+ PS L Sbjct: 124 MVEEIVVENGKVKGIITSLGVFYGAKAVIITPGTFLNGLIHIGLDSFEAGRAGEFPSKKL 183 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGI 242 S K GRLKTGTP R+D KTI + KTE+Q D+ IPFS+ T KI N Q+ C I Sbjct: 184 SESIKKLGLKMGRLKTGTPPRIDAKTIDFSKTEEQGGDDPPIPFSYSTKKINNPQVPCYI 243 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II+ N+ S +YSG IK GPRYCPSIEDK+V+F +++ HQIFLEPEGL+ Sbjct: 244 TYTNEKTHEIILNNLDRSPLYSGKIKGIGPRYCPSIEDKVVKFRDKSRHQIFLEPEGLSR 303 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 Y NGI T+LP ++Q F+RTIPGLE I+RPGYAIEYD++ P ++ TLE K I G Sbjct: 304 KEYYANGIPTSLPYDVQVAFVRTIPGLEDAEIMRPGYAIEYDFVYPTQIRHTLEVKGIEG 363 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+LAGQINGT+GYEEAAAQGL+AGIN+A K K + R ++YIGV+IDDL +KG E Sbjct: 364 LYLAGQINGTSGYEEAAAQGLMAGINAALKIKKQPPLILGRDEAYIGVLIDDLVTKGTQE 423 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAE+R+ LR DNAD RL G K+G + E + F K + LK+ Sbjct: 424 PYRMFTSRAEFRLLLRHDNADLRLRDYGYKIGLVDEETYEEFNKKKELLQREIKRLKTTT 483 Query: 483 LTSKNLSSTSISFKQDGKTRTA---YEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + ++ Q A + L P+ + + P + + E ++I Sbjct: 484 IKPSEELNKALIEAQTTPVEEATFLDKLLKRPELNYDFIKKFAPSEVTLTKELEELVEIH 543 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y +QM + +K E++LIP++FD++ +P LS E+ +KL+ + P + QA +I Sbjct: 544 IKYEGYIAKQMELVERMKQFEEKLIPENFDFN-IPGLSREVIQKLTEVAPRTIGQAMRIP 602 Query: 600 GMTPAALNLLLIYI-KKNTVKL 620 G+TPAA+++L++ + KK TVK Sbjct: 603 GVTPAAISILMVAVQKKTTVKK 624 >gi|300702502|ref|YP_003744102.1| glucose-inhibited division protein a, tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Ralstonia solanacearum CFBP2957] gi|299070163|emb|CBJ41454.1| Glucose-inhibited division protein A, tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Ralstonia solanacearum CFBP2957] Length = 647 Score = 787 bits (2034), Expect = 0.0, Method: Composition-based stats. Identities = 285/630 (45%), Positives = 386/630 (61%), Gaps = 15/630 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNP+IGG+GKGHLV+E+DA Sbjct: 6 EFDVIVVGGGHAGTEAALAAARMGCQTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 66 LGGAMALATDEGGIQFRILNSSKGPAVRATRAQADRVLYKAAIRHRLENQPNLMLFQQAV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + V Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 126 EDLLVESDRVVGAVTQVGVRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSA 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTD-KITNRQIECGI 242 + GRLKTGTP R+DG+TI + E+Q D +P FSF+ + RQ+ C + Sbjct: 186 RLKELKLPQGRLKTGTPPRIDGRTIDFSVLEEQPGDLDPVPVFSFLGRADMHPRQVPCWV 245 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T Sbjct: 246 THTNERTHDIIRAGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLTT 305 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + YPNG+ST+LP ++Q I ++ GLE +I+RPGYAIEYDY +P+ L +LE+K I+G Sbjct: 306 NEFYPNGVSTSLPFDVQLDLIHSMRGLENAHILRPGYAIEYDYFDPRGLKASLESKAITG 365 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AGIN+ + + R +Y+GV++DDL ++GV E Sbjct: 366 LFFAGQINGTTGYEEAAAQGLLAGINAGLQVQGKEAWTPRRDQAYLGVLVDDLITRGVTE 425 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAE+R+SLR DNAD RLT G LG + + R F + + LKS Sbjct: 426 PYRMFTSRAEFRLSLREDNADMRLTEAGRGLGVVDDTRWDAFNRKRDAVSRETERLKSTW 485 Query: 483 LTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLF-----SICPDA-----RKFS 529 + L + + K + + + L P+ + ++L P+A + Sbjct: 486 VNPAILPAADAEPVLGKGIEREYSLADLLRRPNVTYESLMGMQGGKYAPEAPLDDEPLLA 545 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 + E+++I Y Y RQ E + + E +P DFDY + LS E+++KL+ KP Sbjct: 546 EQIREQIEIGIKYHGYIARQADEVERLGASENTRLPADFDYKQVRGLSIEVQQKLAQHKP 605 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 + QAS+I G+TPAA++LLL+++KK ++ Sbjct: 606 ETIGQASRISGITPAAVSLLLVHLKKGVLR 635 >gi|221135171|ref|ZP_03561474.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Glaciecola sp. HTCC2999] Length = 629 Score = 787 bits (2034), Expect = 0.0, Method: Composition-based stats. Identities = 294/622 (47%), Positives = 390/622 (62%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 SYDVIV+GGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 YEESYDVIVVGGGHAGTEAALAAARMGVKTLLLTHNMETLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M D AGIQFR LN KGPAVR R QADR LYR A+++ + Q+NL + Q Sbjct: 63 IDALGGTMAHAIDHAGIQFRTLNSSKGPAVRATRAQADRNLYRNAVRKSLEHQQNLTIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 E N ++ +V Q + TVV+T GTFL G IHIG GR GD PS + Sbjct: 123 QSCDDIIVENNRVTGVVTQMGLKFKAKTVVITVGTFLGGTIHIGMENYKGGRAGDPPSIA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIEC 240 L F RLKTGTPARLD +T+ ++ + Q D L FSFM + RQI C Sbjct: 183 LAQRLRALPFRVDRLKTGTPARLDARTLNYEVMQAQPGDTPLPVFSFMGKVEQHPRQIPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN TH II + S +Y+G I+ GPRYCPSIEDKI RF +++ HQIF+EPEGL Sbjct: 243 YITHTNERTHEIIRGGLDRSPMYTGVIEGIGPRYCPSIEDKINRFADKDSHQIFVEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 ++ +YPNGIST+LP ++Q +R+I G E +IIRPGYAIEYD+ +P++L +LETK I Sbjct: 303 DSIEIYPNGISTSLPFDVQFDLVRSIKGFENAHIIRPGYAIEYDFFDPRDLKQSLETKFI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQINGTTGYEEA AQGL+AG N+A ++ I R +YIGV+IDDL + G Sbjct: 363 EGLFFAGQINGTTGYEEAGAQGLIAGANAALQTQDKAPISLRRDQAYIGVLIDDLATMGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLTP+G ++G + + R F + + + LK+ Sbjct: 423 KEPYRMFTSRAEYRLLLREDNADMRLTPLGREVGLVDDARWAAFNEKLDLIEQEKQRLKA 482 Query: 481 LVLTSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERL 536 + ++ + + + T E + P+ + + L I E++ Sbjct: 483 HYVHPEHSATPALNPLLKNPVSREHTFEELIRRPEMTYKKLMEIEGIGPGLEHVQAAEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ YA Y RQ E + + E+ L+P FDYS + LSNE+ KL+ +P + +AS Sbjct: 543 EIQIKYAGYIERQKEEIAKTQRHEETLLPPTFDYSQISGLSNEVVAKLTESRPETIGKAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA++LLL+Y+KK+ + Sbjct: 603 RISGITPAAISLLLVYLKKHNM 624 >gi|304405895|ref|ZP_07387553.1| glucose inhibited division protein A [Paenibacillus curdlanolyticus YK9] gi|304345138|gb|EFM10974.1| glucose inhibited division protein A [Paenibacillus curdlanolyticus YK9] Length = 632 Score = 787 bits (2034), Expect = 0.0, Method: Composition-based stats. Identities = 269/617 (43%), Positives = 376/617 (60%), Gaps = 3/617 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIV+G GHAG EAA AA++G T L+T + M CNP+IGG KGH+VREIDA Sbjct: 7 SYDVIVVGAGHAGSEAALAAARMGCETLLLTINLDMVAFMPCNPSIGGPAKGHVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAV R QAD+ Y+ M++ I ++L + QG V Sbjct: 67 LGGEMGRNIDKTFIQMRMLNTGKGPAVHALRAQADKFDYQHMMKKTIEETDHLTLRQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E ++ + + R VV+TTGT++RG + +G+L +G PS L Sbjct: 127 DELIVEDGHCVGVITKTGAEYRAKAVVITTGTYMRGKVIMGELMYESGPNNQQPSIKLSQ 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 F R KTGTP R+ G TI + KTE Q DE+ FS+ T+ N Q+ C +T Sbjct: 187 CLKDLGFQLARFKTGTPPRVHGDTIDFSKTEIQPGDEKPKFFSYETESSNNEQLPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T+ TH+II +N+ + ++SG I+ GPRYCPSIEDKIVRF ++ HQIFLEPEG NT Sbjct: 247 TSETTHQIINDNLHRAPMFSGAIEGTGPRYCPSIEDKIVRFADKPKHQIFLEPEGKNTSE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 Y G+ST++PE++Q +R+IPGLE V ++R GYAIEYD + P +L+P+LETK I GLF Sbjct: 307 YYVQGLSTSMPEDVQLGILRSIPGLENVEMMRTGYAIEYDAVVPTQLWPSLETKLIEGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEA QG+VAGIN+ARK+ + + R+ YIGVMIDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAGGQGIVAGINAARKAQGKEPVIIERSQGYIGVMIDDLVTKGTSEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL- 483 R+ TSRAEYR+ LR DNAD RLTP+G ++G I + R R+ + LK+ + Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTPLGYEIGLITQERYDRYLNKKELVEQEIERLKTTKIR 486 Query: 484 --TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 S I +A L P+ + ++ + P + + + E+ +I+ Sbjct: 487 MEESVQALLAEIGSAPLTGGCSALSLLLRPEVTYAHIEKLVPAPYELTEEMKEQAEIQVK 546 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y+ Y +Q+ + + + EK+ IP D DY + L+NE K LS ++P ++ QAS+I G+ Sbjct: 547 YSGYIEKQLHQVERMGKMEKKRIPDDIDYFDVHGLANEAKTNLSQIRPLSIGQASRIAGV 606 Query: 602 TPAALNLLLIYIKKNTV 618 TPA +++LL+Y++ Sbjct: 607 TPADISILLVYLEHYNR 623 >gi|82411948|gb|ABB76057.1| glucose inhibited division protein A [Nitrosospira multiformis ATCC 25196] Length = 647 Score = 787 bits (2034), Expect = 0.0, Method: Composition-based stats. Identities = 298/621 (47%), Positives = 400/621 (64%), Gaps = 5/621 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G T L++H T+G MSCNP+IGG+GKGHLV+EIDAL Sbjct: 22 FDVIVIGGGHAGTEAALAAARIGQKTLLLSHNIETLGQMSCNPSIGGIGKGHLVKEIDAL 81 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+M AD AGIQFR+LN +KGPAVR R QADR LYR A+++ + SQ NL + Q V Sbjct: 82 GGVMAEAADEAGIQFRILNSRKGPAVRATRAQADRVLYRQAIRQRLESQPNLWLFQQGVD 141 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E ++ +V Q V+LT GTFL G+ H+G AGR GD PSNSL Sbjct: 142 DLVLEGERVAGVVTQLGIRFNARAVILTAGTFLAGLAHVGSANFQAGRAGDLPSNSLAGR 201 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + GRLKTGTP R+DG+TI + Q D + FSFM + ++ Q+ C IT Sbjct: 202 LRELKLPVGRLKTGTPPRIDGRTIDYSAVAAQPGDAPVPVFSFMGNAASHPKQVSCWITH 261 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH II + S ++SG I+ GPRYCPSIEDK+VRF + HQIFLEPEGL T Sbjct: 262 TNSQTHDIIRSGLDRSPLFSGAIEGIGPRYCPSIEDKVVRFSAKESHQIFLEPEGLTTHE 321 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LP ++Q + +R+I GLE +I RPGYAIEYDY +P+ L +LET+ I GLF Sbjct: 322 VYPNGISTSLPFDMQVKLVRSIKGLENAHITRPGYAIEYDYFDPRALKSSLETRMIEGLF 381 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AGIN+A K+ + C R ++Y+GV++DDL ++GV EPY Sbjct: 382 FAGQINGTTGYEEAAAQGLLAGINAALKTQDREPWCPRRDEAYLGVLVDDLITRGVTEPY 441 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT +G +LG + + R F ++ ++ LK+ L+ Sbjct: 442 RMFTSRAEYRLQLREDNADLRLTEVGRRLGVVNDARWVAFNIKLEAIAQEQNRLKTTWLS 501 Query: 485 SKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI-CPDARKFSSLVIERLQIES 540 K+LS T + K + ++ L P+ S L ++ E+++I++ Sbjct: 502 PKSLSETDALRVIGKNIEHECSLHDLLRRPNVSYAELMTLPGAGEPVVDLAAAEQVEIQA 561 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E + E +P+D DY ++ LSNE+++KL+ KP QAS+I G Sbjct: 562 KYQGYIERQKDEVARNAYYEDIRLPQDLDYKTVRGLSNEVQQKLNQFKPETAGQASRISG 621 Query: 601 MTPAALNLLLIYIKKNTVKLN 621 +TPAA++LLL+++K+ N Sbjct: 622 ITPAAISLLLVHVKRGFSSAN 642 >gi|149375653|ref|ZP_01893422.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Marinobacter algicola DG893] gi|149360055|gb|EDM48510.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Marinobacter algicola DG893] Length = 628 Score = 787 bits (2034), Expect = 0.0, Method: Composition-based stats. Identities = 285/617 (46%), Positives = 401/617 (64%), Gaps = 5/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G+ T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FDVIVIGGGHAGTEAALAAARMGSQTLLLTHNIETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D AGIQFRVLN +KGPAVR R QADR LY+ A++ + +Q NL + Q Sbjct: 67 GGAMAMATDKAGIQFRVLNSRKGPAVRATRAQADRVLYKAAIREILENQPNLTLFQQAAD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + I+ +V Q R TVVLTTGTFL GVIHIG + GR GD+P+N+L Sbjct: 127 DLIVDGERITGVVTQSGIRFRAPTVVLTTGTFLGGVIHIGMQQHSGGRAGDAPANALAQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + F+ GRLKTGTP R+D +++ + ++Q+ D+ SF+ + + Q+ C +TR Sbjct: 187 LRELPFNVGRLKTGTPPRIDARSVDFSVMQEQWGDDPAPVMSFLGSRNQHPEQVCCYVTR 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T +TH II S +++G+I+ GPRYCPSIEDK+ RF +++ HQIF+EPEGL T+ Sbjct: 247 TTEQTHDIIRSGFDRSPMFAGNIEGIGPRYCPSIEDKVNRFADKDSHQIFVEPEGLTTNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP +IQ +RTIPG E +I RPGYAIEYD++NP++L TLETK I GL+ Sbjct: 307 LYPNGISTSLPFDIQLAAVRTIPGFENAHITRPGYAIEYDFLNPQDLRHTLETKFIQGLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AGIN+A ++ D R ++Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGINAALRAQDKDEWYPRRDEAYLGVLVDDLITMGTSEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G KLG + ++R + F + R L++ + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTETGHKLGLVDDQRWQAFNSKREAIGAERQRLETTRIH 486 Query: 485 SKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 ++ S + + +T E L P+ + +++ + V ++++IE Sbjct: 487 PGTSGGDAANSHLRQPMNRDQTLAELLRRPEINYRHIADMAEGHAD-DPAVADQVEIEIK 545 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y RQ E + ++ E +P D D+ ++ LSNE+K+KL ++P + QAS+I+G+ Sbjct: 546 YEGYISRQADEIERLRRNENTRLPDDIDFDAIGGLSNEIKQKLKEVRPETVAQASRIQGV 605 Query: 602 TPAALNLLLIYIKKNTV 618 TPAA++ +L+++KK + Sbjct: 606 TPAAISQVLVHLKKRDL 622 >gi|222150245|ref|YP_002551202.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Agrobacterium vitis S4] gi|254811504|sp|B9JV52|MNMG_AGRVS RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|221737227|gb|ACM38190.1| glucose inhibited division protein A [Agrobacterium vitis S4] Length = 621 Score = 787 bits (2034), Expect = 0.0, Method: Composition-based stats. Identities = 370/618 (59%), Positives = 467/618 (75%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + R +DVIVIGGGHAG EAA +A+LGA T L+TH+ TIG MSCNPAIGGLGKGHLVRE Sbjct: 1 MPRRFDVIVIGGGHAGSEAAYASARLGARTCLVTHRRDTIGVMSCNPAIGGLGKGHLVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL GLMGR ADAAGIQFR+LN KKGPAVRGPRTQADR+LYR A+Q + + L++I+ Sbjct: 61 IDALGGLMGRCADAAGIQFRLLNRKKGPAVRGPRTQADRKLYRQAVQNVLFNHPQLEIIE 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G+V N E + +++ D + ++V+LT+GTFLRG+IHIG+ KIPAGR+G++PS Sbjct: 121 GDVFDLNVENGTVKGVILADGQSLPSASVILTSGTFLRGLIHIGQTKIPAGRVGEAPSLG 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L + + GRLKTGTPARLDG+TI W + E Q ADE+ +PFSFMTD+ITNRQIECG Sbjct: 181 LSATLGRLGLRLGRLKTGTPARLDGRTIDWAQLEMQAADEQPVPFSFMTDRITNRQIECG 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 ITRT TH II +NI SA+YSG I+ GPRYCPSIEDKI RFG+R+GHQ+FLEPEGL+ Sbjct: 241 ITRTTAATHTIIRDNIHLSAMYSGQIEGVGPRYCPSIEDKISRFGDRDGHQVFLEPEGLD 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 VYPNGIST+LPE +Q +F+RT+PGLE V I++ YAIEYD+I+P+EL +LE K++S Sbjct: 301 DHTVYPNGISTSLPESVQKEFMRTLPGLENVTILQSAYAIEYDHIDPRELSASLELKRLS 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GL+LAGQINGTTGYEEAAAQGLVAG+N+AR + D + FSR SYIGVMIDDL S GV Sbjct: 361 GLYLAGQINGTTGYEEAAAQGLVAGLNAARTAGGQDVVHFSRAQSYIGVMIDDLISHGVT 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAE+R+SLR DNAD RLTPIG+ LGCI ++KRF Y + + ++L++ Sbjct: 421 EPYRMFTSRAEFRLSLRADNADMRLTPIGIALGCIASDQEKRFKDYRHQIDDTINMLETR 480 Query: 482 VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 LT ++ I QDG+ RTA E L+YPD SI +L + P+ S V E ++I ++ Sbjct: 481 KLTPNEAAAVGIPVNQDGRRRTALELLAYPDISIADLSRLWPELDALDSKVAEAVEIHAT 540 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ + K +E RLIPKDFDY+SL LSNELK+KL +P NL QA+K+EGM Sbjct: 541 YAVYMDRQNADIAATKRDEDRLIPKDFDYASLSGLSNELKQKLEKTRPENLSQAAKVEGM 600 Query: 602 TPAALNLLLIYIKKNTVK 619 TPAA++LL+ ++ K ++ Sbjct: 601 TPAAISLLIAFLNKGMLR 618 >gi|255521613|ref|ZP_05388850.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Listeria monocytogenes FSL J1-175] Length = 629 Score = 787 bits (2034), Expect = 0.0, Method: Composition-based stats. Identities = 263/619 (42%), Positives = 375/619 (60%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+G GHAG EA + ++GA T ++T + M CNP++GG KG +VREIDA Sbjct: 8 TFDVIVVGAGHAGVEAGLASGRMGAKTLMLTINLDMVAFMPCNPSVGGPAKGVVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ M+ I +EN+ + QG V Sbjct: 68 LGGEMGRNTDKTYIQMRMLNTGKGPAVRALRAQADKWDYQHEMKHTIEKEENITLRQGLV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ ++ TVV+TTGTF RG I +G+L+ +G PS L Sbjct: 128 DRLVIEDGVCKGVITNSGAIYYAKTVVITTGTFSRGEIIVGELRYSSGPNNQQPSVKLSE 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F+ R KTGTP R+ TI + KTE+Q D+ FSF T ++ Q+ C +T Sbjct: 188 HLEELGFELRRFKTGTPPRVKSSTIDYSKTEEQPGDDHPRAFSFDTVEMLLDQLPCWLTY 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +++ K G RYCPSIEDKIVRF ++ HQIFLEPEG NT+ Sbjct: 248 TNETTHEIIQANLHRSPMFTATKKGTGARYCPSIEDKIVRFSDKPRHQIFLEPEGKNTEE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPEE+Q + +RTIPGLE V ++R GYAIEYD + P +L+P+LETK + GLF Sbjct: 308 VYVQGLSTSLPEEVQREMLRTIPGLENVEMMRVGYAIEYDAVMPDQLWPSLETKLVEGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+ARK + + + R +YIGV+IDDL +KG EPY Sbjct: 368 TAGQINGTSGYEEAAGQGLMAGINAARKVFEKEPVILGRDQAYIGVLIDDLVTKGTEEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT IG ++G I + R +RF + L+ + Sbjct: 428 RLLTSRAEYRLLLRHDNADLRLTEIGHEIGLISDERYERFLAKQSAIEAEKERLQKTRIK 487 Query: 485 SKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 L +DG A + L P+ + + I + + E+++I+ Sbjct: 488 PTAEVQAMLKEIGSGELKDGI--LAADLLRRPEITYDKIAQIVSRETFVTDEIAEQVEIQ 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + ++ +++K E + IP++ DY ++ L+ E EKL ++P ++ QA +I Sbjct: 546 IKYEGYIQKSNLQVEKMKRMEDKKIPENIDYDAISGLATEALEKLKKIEPLSIAQARRIS 605 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 606 GVNPADISILLVYIEQGKI 624 >gi|300314067|ref|YP_003778159.1| glucose inhibited division GidA protein [Herbaspirillum seropedicae SmR1] gi|300076852|gb|ADJ66251.1| glucose inhibited division GidA protein [Herbaspirillum seropedicae SmR1] Length = 642 Score = 787 bits (2034), Expect = 0.0, Method: Composition-based stats. Identities = 290/633 (45%), Positives = 395/633 (62%), Gaps = 16/633 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + +DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNP+IGG+GKGHLV+ Sbjct: 2 LFPTQFDVIVVGGGHAGTEAALAAARMGQKTLLLTHNIETLGQMSCNPSIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DA+ G M D AGIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Sbjct: 62 EVDAMGGAMAIATDEAGIQFRILNSSKGPAVRATRAQADRILYKAAIRSRLENQPNLWLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + + V Q VVLT GTFL G IH+G GR GD P+ Sbjct: 122 QQAVDDLMLEGDRVVGAVTQAGIRFAGRAVVLTAGTFLDGKIHVGLNNYSGGRAGDPPAV 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDK-ITNRQI 238 SL + GRLKTGTP R+DG++I E+Q D +P FS M + + RQ+ Sbjct: 182 SLSARLKELKLPQGRLKTGTPPRIDGRSINLAILEEQPGDLDPVPVFSVMGNAAMHPRQM 241 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C IT TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQI+LEPE Sbjct: 242 PCWITHTNSRTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIYLEPE 301 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GL T YPNGIST+LP ++Q + +R++ G+E +I+RPGYAIEYDY +P+ L +LET+ Sbjct: 302 GLTTHEFYPNGISTSLPFDVQLELVRSMKGMENAHILRPGYAIEYDYYDPRGLKSSLETR 361 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 ++ GLF AGQINGTTGYEEAAAQG++AGIN+A ++ + R ++Y+GV++DDL ++ Sbjct: 362 QVQGLFFAGQINGTTGYEEAAAQGMLAGINAALQTQGREAWTPRRDEAYLGVLVDDLVTQ 421 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 GV EPYRMFTSRAEYR+SLR DNAD RLT IG +LGC+G+ + + F + + + L Sbjct: 422 GVQEPYRMFTSRAEYRLSLREDNADLRLTEIGRELGCVGDAQWEAFDRKREAVSREMERL 481 Query: 479 KSLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI---------CPDAR 526 KS + + L++ + K + + L P+ S +L + P Sbjct: 482 KSTWVNPRILAAAEAERVLGKAIEREYNLLDLLRRPNVSYDSLMGLTGTEGQALAGPGIE 541 Query: 527 KFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSI 586 V E+++I+ YA Y RQ E E +P D DY + ALS E+++KL+ Sbjct: 542 DGP--VREQVEIQVKYAGYIARQADEISRQDHNENLKLPADLDYMDVKALSIEVRQKLNK 599 Query: 587 LKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 +P L QAS+I G+TPAAL+LLL+++KK +K Sbjct: 600 HRPETLGQASRISGVTPAALSLLLVHLKKGGLK 632 >gi|161594059|ref|NP_900331.2| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Chromobacterium violaceum ATCC 12472] gi|205831545|sp|Q7P0A6|MNMG_CHRVO RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A Length = 632 Score = 787 bits (2033), Expect = 0.0, Method: Composition-based stats. Identities = 278/620 (44%), Positives = 385/620 (62%), Gaps = 8/620 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 S+DVIV+GGGHAG EAA AA++G +T L+TH T+G MSCNP+IGG+GKGHLV+E+DA Sbjct: 6 SFDVIVVGGGHAGTEAALAAARMGCATLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D GIQFR LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 66 LGGAMALATDIGGIQFRTLNASKGPAVRATRAQADRILYKAAIREMLENQPNLTLFQQPV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + + R TVVLT GTFL G IH+G GR GD +++L Sbjct: 126 DDLLIEGDRVVGAITAIGITFRAKTVVLTAGTFLSGKIHVGLENYTGGRAGDQAASTLGE 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK-ITNRQIECGIT 243 + + GRLKTGTP R+DG+++ + E+Q D FS+ + + +Q+ C IT Sbjct: 186 RLRELNLPVGRLKTGTPPRIDGRSVDFSVMEEQPGDTPEPVFSYRGKRAMHPKQLPCWIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II S +++G I+ GPRYCPSIEDKI RF +++ HQ+FLEPEGL T Sbjct: 246 HTNERTHDIIRSGFDRSPMFTGVIEGVGPRYCPSIEDKINRFADKDSHQVFLEPEGLTTH 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 YPNGIST+LP +IQ +R+I G+E +I+RPGYAIEYDY +P+ L +LETK I GL Sbjct: 306 EFYPNGISTSLPFDIQLAAVRSIRGMENAHILRPGYAIEYDYFDPRGLKASLETKAIQGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+ + + + C R ++Y+GV++DDL +KGV EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGLNAGLFAREQEAWCPRRDEAYLGVLVDDLITKGVSEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R+ LR DNAD RLT +G KLG +G+ + F + ++ L++ L Sbjct: 426 YRMFTSRAEFRLQLREDNADLRLTEMGRKLGVVGDEQWDAFCRKRDAVEAEKARLQATWL 485 Query: 484 TSKNLSS----TSISFKQDGKTRTAYEFLSYPDFSIQNLF---SICPDARKFSSLVIERL 536 L+ + K + T + L P+ + L A + + V E++ Sbjct: 486 HPSKLADPAALARVLGKPIEREYTLQDLLKRPNVPYRELMTVPEAADGAPELADEVAEQV 545 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y Y RQ E E +P D DY + LS E+++KL+ +P L QAS Sbjct: 546 EIQVKYQGYINRQNEELARRDNLEDIRLPGDIDYGLVKGLSKEVQQKLNQQRPETLGQAS 605 Query: 597 KIEGMTPAALNLLLIYIKKN 616 +I+G+TPAA+ LL++++++ Sbjct: 606 RIQGITPAAVALLMVHLRRG 625 >gi|257455888|ref|ZP_05621107.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enhydrobacter aerosaccus SK60] gi|257446736|gb|EEV21760.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Enhydrobacter aerosaccus SK60] Length = 628 Score = 787 bits (2033), Expect = 0.0, Method: Composition-based stats. Identities = 304/625 (48%), Positives = 391/625 (62%), Gaps = 7/625 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GK HLVRE+D Sbjct: 5 KIYDVIVIGGGHAGTEAALAAARMGQQTLLLTHNIETLGQMSCNPAIGGIGKSHLVREVD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D AGIQFRVLN +KG AVR R QADR LY+ A++ + +Q NLD+ Q Sbjct: 65 ALGGAMALATDKAGIQFRVLNSRKGAAVRATRAQADRILYKAAIRYTLENQPNLDIFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 E ++V Q C VVLT+GTFL G IHIG GR GD PS L Sbjct: 125 ADDILVENGKAVAVVTQSGIEFACGAVVLTSGTFLGGTIHIGLENHKGGRAGDPPSIRLA 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK-ITNRQIECGI 242 + + GRLKTGTP R+D +T+ + Q D L S++ D + RQI C I Sbjct: 185 DRLRELKLPVGRLKTGTPPRIDARTVDFSVMTVQPGDTPLPVMSYLGDVSMHPRQINCYI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II + S +YSG I+ GPRYCPSIEDKI RF +++ HQIF+EPEGL T Sbjct: 245 THTNERTHDIIRSGLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKDSHQIFIEPEGLTT 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L P+LETK I Sbjct: 305 HELYPNGISTSLPFDIQLALVRSMKGLENAHILRPGYAIEYDYFDPQNLKPSLETKSIDN 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQG++AG+N+AR++ LD R +YIGV++DDL + G E Sbjct: 365 LFFAGQINGTTGYEEAAAQGILAGLNAARRTQGLDAWTPRRDQAYIGVLVDDLITHGTKE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT IG LG + + R + ++ + + L+SL Sbjct: 425 PYRMFTSRAEYRLLLREDNADQRLTEIGRDLGLVDDARWQVYSDKMTAIEQETARLRSLW 484 Query: 483 LTSKNLSSTSISFKQ---DGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 T N S K K A + L P+ S ++ + S+ V E+++I Sbjct: 485 ATPTNTLGQSFINKTGEVLTKENNALDLLKRPNVSFDDISELTESP--VSAEVGEQIEIG 542 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 YA Y RQ +E ++K E LIP DF Y + LSNE+ +KL ++P L QAS+I Sbjct: 543 VKYAGYIDRQQVEIGQMKKLEHTLIPDDFTYHDISGLSNEIVQKLEKVRPTTLAQASRIS 602 Query: 600 GMTPAALNLLLIYIKKNTVKLNEIV 624 G+TPAA+ LL + IKK+ K E++ Sbjct: 603 GVTPAAVQLLAMMIKKSK-KAREVL 626 >gi|162139859|ref|YP_413449.2| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Nitrosospira multiformis ATCC 25196] gi|205375715|sp|Q2Y5B4|MNMG_NITMU RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A Length = 632 Score = 787 bits (2033), Expect = 0.0, Method: Composition-based stats. Identities = 298/621 (47%), Positives = 400/621 (64%), Gaps = 5/621 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIVIGGGHAG EAA AA++G T L++H T+G MSCNP+IGG+GKGHLV+EIDAL Sbjct: 7 FDVIVIGGGHAGTEAALAAARIGQKTLLLSHNIETLGQMSCNPSIGGIGKGHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G+M AD AGIQFR+LN +KGPAVR R QADR LYR A+++ + SQ NL + Q V Sbjct: 67 GGVMAEAADEAGIQFRILNSRKGPAVRATRAQADRVLYRQAIRQRLESQPNLWLFQQGVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E ++ +V Q V+LT GTFL G+ H+G AGR GD PSNSL Sbjct: 127 DLVLEGERVAGVVTQLGIRFNARAVILTAGTFLAGLAHVGSANFQAGRAGDLPSNSLAGR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + GRLKTGTP R+DG+TI + Q D + FSFM + ++ Q+ C IT Sbjct: 187 LRELKLPVGRLKTGTPPRIDGRTIDYSAVAAQPGDAPVPVFSFMGNAASHPKQVSCWITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH II + S ++SG I+ GPRYCPSIEDK+VRF + HQIFLEPEGL T Sbjct: 247 TNSQTHDIIRSGLDRSPLFSGAIEGIGPRYCPSIEDKVVRFSAKESHQIFLEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LP ++Q + +R+I GLE +I RPGYAIEYDY +P+ L +LET+ I GLF Sbjct: 307 VYPNGISTSLPFDMQVKLVRSIKGLENAHITRPGYAIEYDYFDPRALKSSLETRMIEGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AGIN+A K+ + C R ++Y+GV++DDL ++GV EPY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGINAALKTQDREPWCPRRDEAYLGVLVDDLITRGVTEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT +G +LG + + R F ++ ++ LK+ L+ Sbjct: 427 RMFTSRAEYRLQLREDNADLRLTEVGRRLGVVNDARWVAFNIKLEAIAQEQNRLKTTWLS 486 Query: 485 SKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI-CPDARKFSSLVIERLQIES 540 K+LS T + K + ++ L P+ S L ++ E+++I++ Sbjct: 487 PKSLSETDALRVIGKNIEHECSLHDLLRRPNVSYAELMTLPGAGEPVVDLAAAEQVEIQA 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E + E +P+D DY ++ LSNE+++KL+ KP QAS+I G Sbjct: 547 KYQGYIERQKDEVARNAYYEDIRLPQDLDYKTVRGLSNEVQQKLNQFKPETAGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTVKLN 621 +TPAA++LLL+++K+ N Sbjct: 607 ITPAAISLLLVHVKRGFSSAN 627 >gi|289436061|ref|YP_003465933.1| glucose inhibited division protein A [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289172305|emb|CBH28851.1| glucose inhibited division protein A [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 629 Score = 787 bits (2033), Expect = 0.0, Method: Composition-based stats. Identities = 267/619 (43%), Positives = 377/619 (60%), Gaps = 7/619 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+G GHAG EA + ++GA T ++T + M CNP++GG KG +VREIDA Sbjct: 8 TFDVIVVGAGHAGVEAGLASGRMGAKTLMLTINLDMVAFMPCNPSVGGPAKGVVVREIDA 67 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ Y+ M+ I +EN+ + QG V Sbjct: 68 LGGEMGRNTDKTYIQMRMLNTGKGPAVRALRAQADKWDYQHEMKHTIEKEENITLRQGLV 127 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ ++ TVV+TTGTF RG I +G+L+ +G PS L Sbjct: 128 DRLVIENGVCKGVITNSGAIYYAETVVITTGTFSRGEIIVGELRYSSGPNNQQPSVKLSE 187 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + F+ R KTGTP R+ TI + KTE+Q DE FSF T ++ Q+ C +T Sbjct: 188 HLEELGFELRRFKTGTPPRVKSSTIDYSKTEEQPGDEHARAFSFDTVEMIMDQLPCWLTY 247 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II N+ S +++ K G RYCPSIEDKIVRF ++ HQIFLEPEG NT+ Sbjct: 248 TNETTHEIIQANLHRSPMFTATKKGTGARYCPSIEDKIVRFSDKPRHQIFLEPEGRNTEE 307 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPEE+Q + +RTIPGLE V ++R GYAIEYD + P +L+P+LETK + GLF Sbjct: 308 VYVQGLSTSLPEEVQREMLRTIPGLENVEMMRVGYAIEYDAVMPDQLWPSLETKLVEGLF 367 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AGIN+ARK K + + R +YIGV+IDDL +KG EPY Sbjct: 368 TAGQINGTSGYEEAAGQGLMAGINAARKVFKKEPVILGRDQAYIGVLIDDLVTKGTEEPY 427 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT IG ++G I + R +RF ++ L+ + Sbjct: 428 RLLTSRAEYRLLLRHDNADLRLTEIGYEIGLISDERYERFLAKQSAIEAEKTRLQKTRIK 487 Query: 485 SKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 L +DG A + L P+ + + I + V E+++I+ Sbjct: 488 PTAEVQAMLKEIGSGELKDGI--LAADLLRRPEITYNKIAEIVSRETSVTDDVAEQVEIQ 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y + ++ +++K E + IP++ DY ++ L+ E EKL ++P ++ QAS+I Sbjct: 546 VKYEGYIEKSKLQVEKMKRMEDKKIPENIDYDAISGLATEALEKLKKIEPLSIAQASRIS 605 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+ PA +++LL+YI++ + Sbjct: 606 GVNPADISILLVYIEQGKI 624 >gi|303240050|ref|ZP_07326571.1| glucose inhibited division protein A [Acetivibrio cellulolyticus CD2] gi|302592319|gb|EFL62046.1| glucose inhibited division protein A [Acetivibrio cellulolyticus CD2] Length = 629 Score = 787 bits (2033), Expect = 0.0, Method: Composition-based stats. Identities = 278/622 (44%), Positives = 392/622 (63%), Gaps = 7/622 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDV+V+G GHAGCEAA +A+LG TA+ +IG+M CNP IGG KGHLVREIDA Sbjct: 7 EYDVVVVGAGHAGCEAALASARLGVKTAVFAINLDSIGNMPCNPNIGGTAKGHLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ ++LN KGPAV R Q DR Y++ M+ + QENLDV Q E+ Sbjct: 67 LGGEMGKNTDKTFIQSKILNSAKGPAVYSLRAQVDRRSYQIEMKHTLEKQENLDVKQAEI 126 Query: 125 AGFNTE----KNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 E K I+ + S+ C ++LTTGT+L+G I IG + G G P+N Sbjct: 127 IEILREEKDGKFKITGVKTHTGSIYNCKAIILTTGTYLKGKIIIGDVSYSGGPDGLFPAN 186 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 L +S + + RLKTGTPARL+ ++I + K E+Q D+ ++PFSF ++I Q+ C Sbjct: 187 KLSDSLKEMGIELLRLKTGTPARLNRRSIDFSKMEEQPGDDTIVPFSFENEEIKKEQVSC 246 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +T TN ETH II EN+ S +Y G I+ GPRYCPSIEDK+VRF E+ HQ+F+EP GL Sbjct: 247 YLTYTNSETHSIIRENLHRSPLYGGMIEGIGPRYCPSIEDKVVRFAEKESHQVFVEPMGL 306 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 NT +Y G+ST+LPE++Q + ++T+PGLE V+++R YAIEYD IN +L +LE K I Sbjct: 307 NTQEMYLQGMSTSLPEDVQIKMMKTLPGLENVSVMRNAYAIEYDGINSTQLNLSLEFKHI 366 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQING++GYEEA +QG++AGIN+ARK + + R+++YIGV+IDDL +KG Sbjct: 367 DGLFSAGQINGSSGYEEAGSQGIMAGINAARKVKGEEPVILDRSEAYIGVLIDDLVTKGT 426 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRM TSR+EYR+ LR DNAD RLTPIG + G I E R ++F E L+ Sbjct: 427 KEPYRMMTSRSEYRLLLRQDNADIRLTPIGYRAGLISEERYRKFEIKKMEIEEEIKRLER 486 Query: 481 LVLTSKNLSSTSISFKQDGKTRTAY---EFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 + + + K ++ + L P+ +L +I + + S V E++ Sbjct: 487 THVPPSEKVNAFLESKNSTPIKSGMKLSDLLKRPELDYDSLGAIDENRPELSFQVREQVS 546 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I Y Y RQM++ ++ K E R + KD DY ++ L E ++KL+ +KP ++ QAS+ Sbjct: 547 ITIKYEGYIKRQMLQVEQFKKLENRKLSKDLDYIAIQGLRLEARQKLNQVKPESVGQASR 606 Query: 598 IEGMTPAALNLLLIYIKKNTVK 619 I G++PA +++LLIY+++N K Sbjct: 607 ISGVSPADISVLLIYLEQNRRK 628 >gi|107104666|ref|ZP_01368584.1| hypothetical protein PaerPA_01005745 [Pseudomonas aeruginosa PACS2] Length = 620 Score = 787 bits (2032), Expect = 0.0, Method: Composition-based stats. Identities = 289/611 (47%), Positives = 377/611 (61%), Gaps = 5/611 (0%) Query: 11 IGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMG 70 IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL G M Sbjct: 2 IGGGHAGTEAALAAARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDALGGAMA 61 Query: 71 RVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTE 130 D GIQFR+LN +KGPAVR R QADR LY+ A++ + +Q NL + Q E Sbjct: 62 EATDKGGIQFRILNSRKGPAVRATRAQADRVLYKAAIRHTLENQPNLWIFQQACDDLIVE 121 Query: 131 KNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMKFD 190 ++ + +V Q VVLTTGTFL G+IHIG GR GD PS +L + Sbjct: 122 QDQVRGVVTQMGLRFHADNVVLTTGTFLGGLIHIGLENYSGGRAGDPPSIALARRLRELP 181 Query: 191 FDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITRTNLET 249 GRLKTGTP R+DG+++ + +Q D + SF+ K + Q+ C IT TN T Sbjct: 182 LRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGSKEQHPEQVSCWITHTNART 241 Query: 250 HRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVYPNG 309 H II N+ S +YSG I+ GPRYCPSIEDKI RF ++ HQ+FLEPEGL T +YPNG Sbjct: 242 HEIIAANLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFLEPEGLTTHELYPNG 301 Query: 310 ISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQI 369 IST+LP ++Q Q +R+I G+E +I+RPGYAIEYD+ +P++L +LETK I GLF AGQI Sbjct: 302 ISTSLPFDVQLQIVRSIRGMENAHIVRPGYAIEYDFFDPRDLRYSLETKVIGGLFFAGQI 361 Query: 370 NGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRMFTS 429 NGTTGYEEA AQGL+AG N+A +S D C R ++YIGV++DDL + G EPYRMFTS Sbjct: 362 NGTTGYEEAGAQGLLAGANAALRSQGKDSWCPRRDEAYIGVLVDDLITLGTQEPYRMFTS 421 Query: 430 RAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSKNLS 489 RAEYR+ LR DNAD RLT G +LG + +RR F + LKS + Sbjct: 422 RAEYRLILREDNADLRLTEKGRELGLVDDRRWAAFEAKREGIEREEQRLKSTWVRPNTPQ 481 Query: 490 STSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAAYT 546 +I+ + LS P+ L I DA + V E+++I + YA Y Sbjct: 482 GDAIAERFGTPLTHEYNLLNLLSRPEIDYAGLVEITGDAVD-NPQVAEQVEIRTKYAGYI 540 Query: 547 GRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAAL 606 RQ E ++ E +P D DY + LS E++ KL+ +P L QAS+I G+TPAA+ Sbjct: 541 DRQQEEISRLRASEDTRLPVDIDYLGISGLSKEIQNKLNQARPETLGQASRIPGVTPAAI 600 Query: 607 NLLLIYIKKNT 617 +LLLI++KK Sbjct: 601 SLLLIHLKKRA 611 >gi|332995871|gb|AEF05926.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Alteromonas sp. SN2] Length = 633 Score = 787 bits (2032), Expect = 0.0, Method: Composition-based stats. Identities = 290/622 (46%), Positives = 398/622 (63%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +++DVIV+GGGHAG EAA AA++G++T L+TH TIG MSCNPAIGG+GKGHLV+E Sbjct: 3 YTQAFDVIVVGGGHAGTEAALAAARMGSNTLLLTHNIETIGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G MG AD GIQFR LN KGPAVR R QADR LYR A+++ + SQENL + Q Sbjct: 63 IDALGGAMGLAADQGGIQFRTLNSSKGPAVRATRAQADRTLYRQAIRKIVESQENLTLFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E + ++ +V Q + TVVLT GTFL G IHIG GR GD PS + Sbjct: 123 QSVDDLVVENDQVTGVVTQMGLKFKAKTVVLTVGTFLGGTIHIGLENYRGGRAGDPPSIA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK-ITNRQIEC 240 L + F RLKTGTPARLD +++ + + Q D FSFM ++ + +QI C Sbjct: 183 LADRLRALPFRVDRLKTGTPARLDARSLDFSVMQAQPGDNPTPVFSFMGNREMHPQQIPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH II + S +++G I+ GPRYCPSIEDKI RF +++ HQIF+EPEGL Sbjct: 243 YITHTNEKTHDIIRGGLDRSPMFTGVIEGIGPRYCPSIEDKITRFADKDSHQIFVEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 N+ VYPNGIST+LP +IQ +R+I G E +I+RPGYAIEYD+ +P++L TLE K I Sbjct: 303 NSIEVYPNGISTSLPFDIQMNLVRSIKGFENAHIVRPGYAIEYDFFDPRDLKQTLENKFI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQINGTTGYEEA AQGL+AG N++ ++ + D + R +Y+GV+IDDL + G Sbjct: 363 KGLFFAGQINGTTGYEEAGAQGLIAGANASLQAQEKDPLILRRDQAYMGVLIDDLATMGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD+RLT +G ++G + + R F ++ L+ Sbjct: 423 KEPYRMFTSRAEYRLLLREDNADSRLTALGREIGLVDDARWAAFNTKMEAVEGELQRLRG 482 Query: 481 LVLTSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 + + + ++ K + E + P+ + + L I + E++ Sbjct: 483 QWVHKDHGATPALNTLLKTPVSKEHSLEELIRRPEMTYRQLMDIESIGPGLADPIAAEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ YA Y RQM E + + E L+P D D++ + LSNE+ KL+ +P + +AS Sbjct: 543 EIQIKYAGYIARQMDEIAKTQRHENSLLPVDLDFTKISGLSNEVVAKLTEARPETIGKAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA++LLL+Y+KK+ + Sbjct: 603 RISGITPAAISLLLVYLKKHGM 624 >gi|258517428|ref|YP_003193650.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Desulfotomaculum acetoxidans DSM 771] gi|257781133|gb|ACV65027.1| glucose inhibited division protein A [Desulfotomaculum acetoxidans DSM 771] Length = 634 Score = 787 bits (2032), Expect = 0.0, Method: Composition-based stats. Identities = 272/621 (43%), Positives = 384/621 (61%), Gaps = 4/621 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDV+V+G GHAGCEAA +A++G T ++T +G M CNPA+GG K LVREIDA Sbjct: 7 DYDVVVVGAGHAGCEAALASARMGCKTLVVTVNLDNVGLMPCNPAVGGPAKSQLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G +G D IQ R+LN KGPAV R QAD+ LY + M+R + +Q NL + Q + Sbjct: 67 LGGEIGNNTDQVAIQMRMLNTAKGPAVHALRAQADKNLYHVNMKRVLENQPNLFLKQLTI 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + ++ + C V+LTTGT+L+G I IG L G G+ PS L + Sbjct: 127 EKILVENDKVVGVIAAAGARFACKAVILTTGTYLKGRIIIGDLAYSGGPQGNFPSIGLSD 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S + + GR KTGTP R+D ++ + K Q D+RL+ FSF + +Q+ C +T Sbjct: 187 SLKEIGLELGRFKTGTPPRIDRNSVDFSKMSIQPGDDRLLNFSFESKVEDRKQVPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH+II +N+ S +++G IK GPRYCPSIEDK+VRF E+ HQ+F+EPEGL T Sbjct: 247 TNENTHKIIRDNLHRSPLFAGVIKGTGPRYCPSIEDKVVRFSEKPKHQVFIEPEGLTTTE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G++T+LPE++Q +RTIPGLEKV I+R GYAIEYDY+ P +L +LE+KKISGLF Sbjct: 307 MYVQGMNTSLPEDVQLAMLRTIPGLEKVEIMRTGYAIEYDYLPPSQLKLSLESKKISGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAAAQG++AGINS + + SR D+YIGV+IDDL +KG+ EPY Sbjct: 367 SAGQINGTSGYEEAAAQGIMAGINSVLYIKEKEPFILSRADAYIGVLIDDLVTKGITEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RL+ +G LG I + R RF ++ F L SL +T Sbjct: 427 RLLTSRAEYRLLLRQDNADLRLSDMGYNLGLIQQDRYDRFCNKREKIKFEIERLSSLSVT 486 Query: 485 SKNLSSTSIS----FKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + + + L P+ S ++L I + + S +IE ++I+ Sbjct: 487 VNENVKQILKNIGTSEIPQQGIKMASLLRRPEVSYKDLIKINKEKVELSDDIIEEVEIQI 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y +Q + ++ K E RL+P DYS + L+ E KL+ +KP ++ QAS+I G Sbjct: 547 KYEGYIKKQTAQIEKFKKIEGRLLPAALDYSKVRGLAAEAALKLNQIKPLSIGQASRIGG 606 Query: 601 MTPAALNLLLIYIKKNTVKLN 621 + PA +++L+IY+++ + Sbjct: 607 VNPADISVLMIYLEQQRRNRS 627 >gi|167038668|ref|YP_001666246.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167041018|ref|YP_001664003.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Thermoanaerobacter sp. X514] gi|256751461|ref|ZP_05492339.1| glucose inhibited division protein A [Thermoanaerobacter ethanolicus CCSD1] gi|300913771|ref|ZP_07131088.1| glucose inhibited division protein A [Thermoanaerobacter sp. X561] gi|307725543|ref|YP_003905294.1| glucose inhibited division protein A [Thermoanaerobacter sp. X513] gi|320117060|ref|YP_004187219.1| glucose inhibited division protein A [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|205831567|sp|B0K8H8|MNMG_THEP3 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|205831568|sp|B0K5N3|MNMG_THEPX RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|166855258|gb|ABY93667.1| glucose inhibited division protein A [Thermoanaerobacter sp. X514] gi|166857502|gb|ABY95910.1| glucose inhibited division protein A [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256749680|gb|EEU62706.1| glucose inhibited division protein A [Thermoanaerobacter ethanolicus CCSD1] gi|300890456|gb|EFK85601.1| glucose inhibited division protein A [Thermoanaerobacter sp. X561] gi|307582604|gb|ADN56003.1| glucose inhibited division protein A [Thermoanaerobacter sp. X513] gi|319930151|gb|ADV80836.1| glucose inhibited division protein A [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 633 Score = 787 bits (2032), Expect = 0.0, Method: Composition-based stats. Identities = 273/622 (43%), Positives = 384/622 (61%), Gaps = 4/622 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDV V+G GHAG EAA A+LG T +I M+CNP+IGG K LVREIDA Sbjct: 7 EYDVAVVGLGHAGSEAALACARLGLKTVGFAVNLDSIALMACNPSIGGPAKAQLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D + +Q R LN KGPAVR R Q D++LY++ M+ + QENLD+ Q E+ Sbjct: 67 LGGEMAINTDKSLLQIRTLNTSKGPAVRSLRAQVDKKLYQMNMKYTLERQENLDIKQAEI 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E N ++ +V + ++ +C ++TTGTFL+G + IG + +G G P+N L Sbjct: 127 VDILVEDNKVTGVVTKLGAIYKCKACIITTGTFLKGRVIIGDVSFDSGPSGLFPANQLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + + F R KTGTPAR+D ++I + K E Q DE + PFS+M DKI Q+ C +T Sbjct: 187 TLKRLGFKLMRFKTGTPARVDKRSIDFSKMEIQPGDEVITPFSYMHDKIEIEQLPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH IIM NI S ++SG+I G RYCPSIEDK+V+F + HQIF+EPEGLNT Sbjct: 247 TNKRTHEIIMANIHRSPLFSGEITGVGVRYCPSIEDKVVKFPHKERHQIFIEPEGLNTYE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+S++LPE++Q +F+RT+PGLE V ++RP YAIEYD I+P +L TLE+KKI GL+ Sbjct: 307 MYVQGMSSSLPEDVQLEFLRTVPGLENVRVMRPAYAIEYDCIDPTQLKATLESKKIEGLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ+NGT+GYEEAAAQGL+AGIN+A K + R+ +YIGV+IDDL +KG EPY Sbjct: 367 FAGQVNGTSGYEEAAAQGLMAGINAAMKLLNKPSVILDRSQAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSRAEYR+ LR DNAD RLT +G K+G + E R ++F K + L +++ Sbjct: 427 RMLTSRAEYRLLLRQDNADFRLTELGYKIGLVTEERYQKFLKKKIQLEKEMRRLLGVMIK 486 Query: 485 SKNLSSTSISFKQDGKTRT---AYEFLSYPDFSIQNLFSICPDAR-KFSSLVIERLQIES 540 + + K T Y L P+ ++ + + V E++ I Sbjct: 487 PSEEVNNFLISKGSTPLVTGVDLYTLLKRPEIDYKSTKFLDKNRPDDILDSVAEQIDINI 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y +Q+ + + K E + IP+D DY + LSNE KEKL+ ++P ++ QAS+I G Sbjct: 547 KYEGYIMKQLRQVEHFKALENKKIPEDIDYYQIHGLSNEAKEKLTKIRPTSIGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTVKLNE 622 ++PA +++LLIY+++ + Sbjct: 607 VSPADISVLLIYMQQLRRNKED 628 >gi|71909712|ref|YP_287299.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Dechloromonas aromatica RCB] gi|123626245|sp|Q478A2|MNMG_DECAR RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|71849333|gb|AAZ48829.1| Glucose-inhibited division protein A subfamily [Dechloromonas aromatica RCB] Length = 628 Score = 786 bits (2031), Expect = 0.0, Method: Composition-based stats. Identities = 296/618 (47%), Positives = 395/618 (63%), Gaps = 5/618 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA+ GA+T L+TH T+G+MSCNP+IGG+GKGHLVRE+DAL Sbjct: 7 FDVIVVGGGHAGTEAALAAARAGANTLLLTHNLDTLGAMSCNPSIGGIGKGHLVREVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D AGIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Sbjct: 67 GGAMAAATDEAGIQFRILNASKGPAVRATRAQADRVLYKQAIRTRLENQPNLTIFAEACD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E + + V Q VVLT GTFL G IH+G GRMGD PS SL + Sbjct: 127 DLIVEGDKVCGAVTQLGIRFMAEAVVLTAGTFLNGKIHVGLENYTGGRMGDPPSVSLASR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + GRLKTGTP RLDGKTI + E+Q +D+ L FSF+ + + Q+ C IT Sbjct: 187 LKELKLPQGRLKTGTPPRLDGKTIDFSVMEEQHSDDPLPVFSFLGNAAQHPKQLPCWITE 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++N H +FLEPEGL T Sbjct: 247 TNERTHDIIRSGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFADKNQHNVFLEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNG+ST+LP +IQ +R+I G+E +I+RPGYAIEYD+ +P+ L TLETK I GLF Sbjct: 307 IYPNGVSTSLPFDIQLALVRSIRGMENCHILRPGYAIEYDFYDPRGLKDTLETKAIHGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEAAAQGL+AGIN+ R C R ++Y+GV++DDL ++GV +PY Sbjct: 367 FAGQINGTTGYEEAAAQGLLAGINAVRYVRGQSGWCPKRNEAYLGVLVDDLITRGVSDPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+SLR DNAD RLT G +LG + + R F + + LKS + Sbjct: 427 RMFTSRAEYRLSLREDNADLRLTEQGRELGLVDDVRWTAFCQKRDAIAAEQERLKSTWVN 486 Query: 485 SKNLSS---TSISFKQDGKTRTAYEFLSYPDFSIQNLFSI-CPDARKFSSLVIERLQIES 540 K + + K +E L P+ + +L ++ + LV+E+L+I + Sbjct: 487 PKITPADDCIRVLGKAIDHEYNLFELLRRPEVTYTSLLTLPGAGEAQTDPLVVEQLEISA 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y RQ E + E ++P + DYSS+ LSNE+++KL+ KP + QAS+I+G Sbjct: 547 KYQGYIDRQAEEVAKSSSYENTVLPSELDYSSVAGLSNEVRQKLAQHKPQTIGQASRIQG 606 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA++LLLI++K++ + Sbjct: 607 ITPAAISLLLIHLKRHNL 624 >gi|296137580|ref|YP_003644822.1| glucose inhibited division protein A [Thiomonas intermedia K12] gi|295797702|gb|ADG32492.1| glucose inhibited division protein A [Thiomonas intermedia K12] Length = 676 Score = 786 bits (2031), Expect = 0.0, Method: Composition-based stats. Identities = 296/631 (46%), Positives = 392/631 (62%), Gaps = 15/631 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R++DV+VIGGGHAG EAA AA++G +T L+TH T+G MSCNP+IGG+GKGHLV+E+D Sbjct: 37 RNFDVVVIGGGHAGTEAALAAARMGCATLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVD 96 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D AGIQFR+LN KGPAVR R QADR+LY+ A++ + Q NL + Q Sbjct: 97 ALGGAMAEATDEAGIQFRILNASKGPAVRATRAQADRQLYKRAIRGRLEDQPNLWLFQQA 156 Query: 124 VAGFNTE----KNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 E ++++V Q R TVVLT GTFL G IHIG + AGR GD PS Sbjct: 157 ADDLLVESTGQGERVTAVVTQTGIRFRTRTVVLTAGTFLDGKIHIGLDQYAAGRAGDPPS 216 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITNR-Q 237 L GRLKTGTPAR+DG+TI + K +Q D +P FSF+ + Q Sbjct: 217 LRLSARLKALALPQGRLKTGTPARIDGRTIDFSKLIEQPGDLNPMPVFSFLGSADQHPAQ 276 Query: 238 IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 + C IT T +TH II + S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEP Sbjct: 277 VACWITHTTEQTHDIIRAGLDRSPMFTGVIEGVGPRYCPSIEDKIHRFADKSSHQIFLEP 336 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EGL T+ YPNGIST+LP ++Q + +IPGLE +++RPGYAIEYDY NP L +LET Sbjct: 337 EGLQTNEFYPNGISTSLPFDVQIAMVHSIPGLENAHLLRPGYAIEYDYFNPMALKTSLET 396 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 K I GLF AGQINGTTGYEEAAAQGL+AGIN+A + D C R +Y+GV++DDL + Sbjct: 397 KAIDGLFFAGQINGTTGYEEAAAQGLLAGINAALQVQGRDPWCPRRDQAYLGVLVDDLVT 456 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL 477 KGV EPYRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F + Sbjct: 457 KGVSEPYRMFTSRAEYRLSLREDNADLRLTEIGRELGVVNDARWDAFCRKRDAIEREIQR 516 Query: 478 LKSLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLF-----SICPDARKFS 529 L++ +T ++L + ++ K + + L P+ L + P+ Sbjct: 517 LRTTWVTPQSLPPEQAEALLGKSIEREYNLADLLRRPELRYDTLAAFPHPAFAPEFP-LG 575 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 E+++I YA Y RQ E +E +P D DY + LS E+++KL+ +P Sbjct: 576 ETEREQVEIHLKYAGYIERQQDEVDRAAQQESLRLPADLDYREVSGLSIEVQQKLNQARP 635 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKKNTVKL 620 L AS++ GMTPAA++LLLI+++K +K Sbjct: 636 ETLGLASRLSGMTPAAVSLLLIHLRKGVLKK 666 >gi|148251783|ref|YP_001236368.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Bradyrhizobium sp. BTAi1] gi|166222911|sp|A5E8G8|MNMG_BRASB RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|146403956|gb|ABQ32462.1| Glucose-inhibited division protein A [Bradyrhizobium sp. BTAi1] Length = 625 Score = 786 bits (2031), Expect = 0.0, Method: Composition-based stats. Identities = 336/620 (54%), Positives = 435/620 (70%), Gaps = 1/620 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIGGGHAGCEAA +A++GA TAL+TH +TIG+MSCNPAIGGLGKGHLVRE+DA Sbjct: 7 SYDVIVIGGGHAGCEAAEASARMGARTALVTHHFATIGAMSCNPAIGGLGKGHLVREVDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRVADA GIQFRVLN +KGPAVRGPR QADR+LY AMQ I NL V++GE Sbjct: 67 LDGLMGRVADAGGIQFRVLNRRKGPAVRGPRAQADRKLYAAAMQAAIRETANLTVVEGEA 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 I+ + + D + C +V+TTGTFLRG+IH+G+ PAGR+G++P+ L Sbjct: 127 DQLIVADGQITGLRLADGRPLACGAIVITTGTFLRGLIHLGEKTWPAGRVGEAPALGLSQ 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S F GRLKTGTP RLDG TI W E Q D+ PFS +T IT QI+CGITR Sbjct: 187 SLEAIGFRLGRLKTGTPPRLDGTTIDWSAVEMQPGDDPPEPFSVLTQTITTPQIQCGITR 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T TH +I N+ S +YSG IKS GPRYCPS+EDKIVRFG+R+GHQIFLEPEGL+ Sbjct: 247 TTTATHDVIRANVHRSPMYSGQIKSTGPRYCPSVEDKIVRFGDRDGHQIFLEPEGLDDTT 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LPEE+Q + TIPGLE+V +IRPGYAIEYD+++P+EL PTL+TK++ GLF Sbjct: 307 VYPNGISTSLPEEVQLALLPTIPGLERVRMIRPGYAIEYDHVDPRELEPTLQTKRMRGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEAAAQGLVAG+N+A + + I F R D Y+GVMIDDL ++G+ EPY Sbjct: 367 LAGQINGTTGYEEAAAQGLVAGLNAALTAGGGEPIVFDRADGYVGVMIDDLVTRGITEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR++LR DNAD RLT G+ LGC+G R + + RSL +S+ +T Sbjct: 427 RMFTSRAEYRLTLRADNADQRLTDKGIALGCVGGDRARFHRTKMDALEAARSLARSVTIT 486 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + ++ +DG+ R+A+E ++YP+ + I P+ + L+I++ Y Sbjct: 487 PNEAAKYGLTLNRDGQRRSAFELMAYPEIGFSEVRGIWPELGTIGPAIAVHLEIDAKYDV 546 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + + +E ++ D DY+ +P LSNE + KL+ +P+ + QA +I+GMTPA Sbjct: 547 YVRRQSEDVDAFRRDEGLVL-GDIDYALVPGLSNEARAKLTAARPWTIGQAGRIDGMTPA 605 Query: 605 ALNLLLIYIKKNTVKLNEIV 624 AL +L Y+++ + +V Sbjct: 606 ALGILAAYLRREARRSKAMV 625 >gi|89898871|ref|YP_521342.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Rhodoferax ferrireducens T118] gi|122477997|sp|Q21QL5|MNMG_RHOFD RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|89343608|gb|ABD67811.1| glucose inhibited division protein A [Rhodoferax ferrireducens T118] Length = 679 Score = 786 bits (2031), Expect = 0.0, Method: Composition-based stats. Identities = 296/657 (45%), Positives = 404/657 (61%), Gaps = 39/657 (5%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + +DVIV+GGGHAG EAA AA++G T L++H T+G MSCNP+IGG+GKGHLV+ Sbjct: 2 LYPQHFDVIVVGGGHAGTEAALAAARMGCKTLLLSHNIETLGQMSCNPSIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DAL G M D GIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Sbjct: 62 EVDALGGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRLLYKAAIRRRLENQPNLWLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + + V Q R TVVLT GTFL G IH+G AGR GD P+ Sbjct: 122 QQAVDDLMVEGDRVVGAVTQAGIKFRAKTVVLTAGTFLDGKIHVGLNNYAAGRAGDPPAV 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERL-------IPFSFMTD-K 232 L + GRLKTGTP RLDG++I + K +Q D FSFM + Sbjct: 182 RLSARLKELKLPQGRLKTGTPPRLDGRSIDFSKCGEQPGDGMPGGMSPVMPVFSFMGRVE 241 Query: 233 ITNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQ 292 Q+ C T TN TH II S +++G I+ GPRYCPS+EDKI RF +++ HQ Sbjct: 242 QHPPQMSCWTTHTNERTHEIIRSGFDRSPMFTGKIEGVGPRYCPSVEDKINRFADKDSHQ 301 Query: 293 IFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELF 352 IFLEPEGL T+ YPNGIST+LP +IQ+ +R++ GLE +I+RPGYAIEYDY +P++L Sbjct: 302 IFLEPEGLTTNEYYPNGISTSLPFDIQYALVRSMAGLENAHILRPGYAIEYDYFDPQQLK 361 Query: 353 PTLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARK-----SNKLDCICFSRTDSY 407 + ET+ I GLF AGQINGTTGYEEAAAQGL AG+N+A + S + + R ++Y Sbjct: 362 SSFETRAIGGLFFAGQINGTTGYEEAAAQGLFAGVNAALQAGAQTSWQQETWVPGRDEAY 421 Query: 408 IGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKY 467 +GV++DDL +KGV EPYRMFTSRAE+R+ LR DNAD RLT G +LG + + R + F++ Sbjct: 422 LGVLVDDLITKGVTEPYRMFTSRAEFRLQLREDNADMRLTETGRRLGLVDDARWEAFSRK 481 Query: 468 IQEYNFLRSLLKSLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSI--- 521 + + L+SL ++ KNL++T + K + + L PD + NL S+ Sbjct: 482 REAVSRETERLRSLWVSPKNLTATESERVLGKSIEHEYSLADLLRRPDVNYANLMSLEGG 541 Query: 522 -------------------CPDARKFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKR 562 P+A F+++VIE+++I + YA Y RQ+ E E Sbjct: 542 KYASAELNIPVSRETPAVPLPEAV-FAAVVIEQVEIVAKYAGYIDRQIEEVGRAAHYENL 600 Query: 563 LIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 +P + DY + ALS E ++KLS +P L QAS++ G+TPAA++LLL+++KK+ K Sbjct: 601 KLPLELDYLQVSALSFEARQKLSKHRPETLGQASRLSGITPAAISLLLVHLKKSNFK 657 >gi|332286173|ref|YP_004418084.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pusillimonas sp. T7-7] gi|330430126|gb|AEC21460.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Pusillimonas sp. T7-7] Length = 638 Score = 786 bits (2031), Expect = 0.0, Method: Composition-based stats. Identities = 299/632 (47%), Positives = 409/632 (64%), Gaps = 14/632 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDVIV+GGGHAG EAA AA+ GAST L+TH T+G MSCNP+IGG+GKGHLV+E+DA Sbjct: 6 EYDVIVVGGGHAGTEAALAAARTGASTLLLTHNMETLGQMSCNPSIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D AGIQFR+LN KGPAVR R QADR LYR+A++ + +Q NL + Q V Sbjct: 66 LGGAMAYATDKAGIQFRILNSSKGPAVRATRAQADRSLYRMAIRTTLQNQPNLTIFQQSV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ V Q R TVVLT GTFL G+IH+G AGR GD P+ +L Sbjct: 126 DDLLLEGDRVAGAVTQIGLKFRGRTVVLTAGTFLNGLIHVGLDHYSAGRAGDPPAITLGQ 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDK-ITNRQIECGI 242 + GRLKTGTP R+D ++I + KTE Q D IP FS++ + Q+ C I Sbjct: 186 RLKELKLPQGRLKTGTPPRIDARSIDFSKTEVQAGDRDPIPVFSYLGSASMHPEQLPCWI 245 Query: 243 TRTNLETHRIIMENIKHSAIYSG--DIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 T TN TH II + S +YS I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL Sbjct: 246 THTNERTHDIIRSGLDRSPMYSDSGTIEGIGPRYCPSIEDKIHRFADKPSHQIFLEPEGL 305 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T +YPNG+ST+LP +IQ +RT+PGLE I+RPGYAIEYDY +P+EL TLET+ I Sbjct: 306 TTQEIYPNGVSTSLPFDIQLALVRTLPGLENAIIMRPGYAIEYDYFDPRELSSTLETRAI 365 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQINGTTGYEEAAAQGL+AG+N+AR++ L+ R ++Y+GV++DDL ++GV Sbjct: 366 KGLFFAGQINGTTGYEEAAAQGLLAGLNAARQAQGLEGWFPKRNEAYLGVLVDDLITRGV 425 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+SLR DNAD RLT +G LG + ++R + F+K ++ + LKS Sbjct: 426 TEPYRMFTSRAEYRLSLREDNADMRLTEMGRTLGLVDDQRWEAFSKKREDVSRETERLKS 485 Query: 481 LVLTSKNLS---STSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-------SS 530 + K L+ + ++ KQ K + + L P + + L ++ + + Sbjct: 486 TWINPKTLAHHTAEALLGKQLEKEHSLLDLLKRPQVTYKALMALHKEDGTLVAGPGLEDA 545 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 + E+++I+ YA Y +Q E + +E + IP D DY ++ +LS E++++L + +P Sbjct: 546 VAAEQVEIQIKYAGYVAKQQEEIERQLEQESQAIPPDLDYDAISSLSIEVRQRLKLSRPE 605 Query: 591 NLLQASKIEGMTPAALNLLLIYIKKNTVKLNE 622 + QAS++ G+TPAA++LLLI++K+ + Sbjct: 606 TVGQASRVSGITPAAISLLLIHLKRLQYRKKA 637 >gi|320539761|ref|ZP_08039422.1| glucose-inhibited cell-division protein [Serratia symbiotica str. Tucson] gi|320030164|gb|EFW12182.1| glucose-inhibited cell-division protein [Serratia symbiotica str. Tucson] Length = 629 Score = 786 bits (2030), Expect = 0.0, Method: Composition-based stats. Identities = 289/619 (46%), Positives = 389/619 (62%), Gaps = 5/619 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVI+IGGGHAG EAA AA++G T L+TH T+G MSCNPAIGG+GKGHLV+EIDA Sbjct: 6 QFDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLM D AGIQFR+LN KGPAVR R QADR LYR A++ + ++ NL + Q V Sbjct: 66 LGGLMATAIDHAGIQFRILNASKGPAVRATRAQADRVLYRQAIRTALENKPNLMIFQQPV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + V Q R VVLT GTFL G IHIG GR GD + SL Sbjct: 126 DDLIVENDHAVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLKNYRGGRAGDPTAISLSQ 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGIT 243 + RLKTGTP R+D +TI + Q D + FSFM + + Q C IT Sbjct: 186 RLRELPLRVNRLKTGTPPRIDARTINFSVLMPQQGDTPVPVFSFMGNASQHPEQRTCYIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN +TH +I N+ S +YSG I+ GPRYCPSIEDK++RF +RN HQIFLEPEGL ++ Sbjct: 246 HTNEKTHEVIRNNLDRSPMYSGIIEGIGPRYCPSIEDKVMRFADRNTHQIFLEPEGLTSN 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +YPNGIST+LP ++Q Q +R++ G++ I+RPGYAIEYD+ +P++L PTLE+K I GL Sbjct: 306 EIYPNGISTSLPFDVQMQIVRSMEGMQNARIVRPGYAIEYDFFDPRDLKPTLESKFIQGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGTTGYEEAAAQGL+AG+N+ R +N+ + R SY+GV++DDL++ G EP Sbjct: 366 FFAGQINGTTGYEEAAAQGLLAGLNAGRYANQDEGWAPRRDQSYLGVLVDDLSTLGTKEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLT G LG + + R R+ + ++ R L+ + + Sbjct: 426 YRMFTSRAEYRLMLREDNADLRLTEKGRDLGLVDDVRWARYCEKLEHIEQERQRLRDIWM 485 Query: 484 TS--KNLSSTSISFK-QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERLQIE 539 +N+ ++ K + E L P+ L S+ + E+++I+ Sbjct: 486 HPHAENVEQVNLLLKTPLSREANGEELLRRPEMDYSLLTSVAAFSPALEDTQAAEQVEIQ 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ E ++ + E ++P D DY + LSNE+ KL+ KP ++ QAS+I Sbjct: 546 VKYQGYIARQQEEIEKQQRNENTVLPLDLDYCQVSGLSNEVIAKLNDHKPNSIGQASRIS 605 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+TPAA+++LLI++KK + Sbjct: 606 GITPAAISILLIWLKKQGL 624 >gi|299065186|emb|CBJ36352.1| Glucose-inhibited division protein A, tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Ralstonia solanacearum CMR15] Length = 647 Score = 786 bits (2030), Expect = 0.0, Method: Composition-based stats. Identities = 284/630 (45%), Positives = 384/630 (60%), Gaps = 15/630 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNP+IGG+GKGHLV+E+DA Sbjct: 6 EFDVIVVGGGHAGTEAALAAARMGCQTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 66 LGGAMALATDEGGIQFRILNSSKGPAVRATRAQADRVLYKAAIRHRLENQPNLMLFQQAV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + V Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 126 EDLLVEGDRVVGAVTQVGVRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSA 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFM-TDKITNRQIECGI 242 + GRLKTGTP R+DG+TI + E Q D +P FSF+ + RQ+ C + Sbjct: 186 RLKELKLPQGRLKTGTPPRIDGRTIDFSVLEAQPGDLDPVPVFSFLGHADMHPRQVPCWV 245 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T Sbjct: 246 THTNERTHDIIRAGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLTT 305 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + YPNG+ST+LP ++Q I ++ GLE+ +I+RPGYAIEYDY +P+ L +LE+K I+G Sbjct: 306 NEFYPNGVSTSLPFDVQLDLIHSMRGLEQAHILRPGYAIEYDYFDPRGLKASLESKAIAG 365 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AGIN+ + R +Y+GV++DDL ++GV E Sbjct: 366 LFFAGQINGTTGYEEAAAQGLLAGINAGLQVQGRAAWTPRRDQAYLGVLVDDLITRGVTE 425 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAE+R+SLR DNAD RLT G LG + + R F + + LKS Sbjct: 426 PYRMFTSRAEFRLSLREDNADMRLTEAGRDLGVVDDARWDAFNRKRDAVSRETERLKSTW 485 Query: 483 LTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLF----------SICPDARKFS 529 + L + + K + + + L P+ + + L ++ D + Sbjct: 486 VNPAILPAADAEPVLGKGIEREYSLADLLRRPNVTYELLMGMQDGKYAPEALLADEPLLA 545 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 + E+++I Y Y RQ E + + E +P DFDY + LS E+++KL+ KP Sbjct: 546 EQIREQIEIGIKYHGYIARQADEVERLGANENTRLPADFDYKQVRGLSIEVQQKLAQHKP 605 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 + QAS+I G+TPAA++LLL+++KK ++ Sbjct: 606 ETIGQASRISGITPAAVSLLLVHLKKGVLR 635 >gi|225181152|ref|ZP_03734598.1| glucose inhibited division protein A [Dethiobacter alkaliphilus AHT 1] gi|225168121|gb|EEG76926.1| glucose inhibited division protein A [Dethiobacter alkaliphilus AHT 1] Length = 627 Score = 786 bits (2030), Expect = 0.0, Method: Composition-based stats. Identities = 267/618 (43%), Positives = 371/618 (60%), Gaps = 3/618 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 Y V+VIG GHAG EAA +A++G T L+T + M CNPAIGG KGHLVRE+DA Sbjct: 7 EYHVVVIGAGHAGSEAALASARMGCKTLLLTLNLDAVALMPCNPAIGGPAKGHLVREVDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+V D IQ R+LN KGPAV R QAD+ +Y+ M+ + + NLD+ Q V Sbjct: 67 LGGEMGKVIDRTKIQIRMLNTAKGPAVHALRAQADKWVYQREMRTVLENTPNLDLQQATV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 F + I ++ Q+ +M + VVLT GT+LRG I +G G G S L Sbjct: 127 ERFQVKGGRIRGVITQNGTMYKTQAVVLTAGTYLRGRIIVGASMTAGGPNGQLASTKLSG 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + + R KTGTP R+ +I + KT Q DE FSF + C +T Sbjct: 187 YLKRIGLELLRFKTGTPPRIHRDSIDFSKTVIQPGDEDPFSFSFAQVPPKIESVPCWLTH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETHR+I EN+ S +Y+GDI+ GPRYCPSIEDK+VRF ER HQ+FLEPEG NT Sbjct: 247 TTEETHRVIQENLHRSPLYAGDIEGVGPRYCPSIEDKVVRFSERPSHQVFLEPEGRNTAE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 Y G+ST+LPE++Q ++TIPGLE V I+RPGYAIEYD I+P +L PT+ETK ++GLF Sbjct: 307 FYVQGMSTSLPEDVQRAMLKTIPGLENVLIMRPGYAIEYDCIDPLQLKPTMETKTVAGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQING++GYEEAAAQG+VAGIN+A + R+ +YIGV+IDDL +KG EPY Sbjct: 367 SAGQINGSSGYEEAAAQGIVAGINAALTFKGQPPLHIDRSMAYIGVLIDDLVTKGTSEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSRAEYR+ LR DNAD RLTP+G + G + E R ++F + + L S+ ++ Sbjct: 427 RMMTSRAEYRLLLRQDNADLRLTPLGHRAGLVSEERFQKFQEKCRAVEEEIERLNSVNIS 486 Query: 485 SKNLSSTSI---SFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 + + K A + L P+ + + I + + S +++I+ Sbjct: 487 PAAAVNDLLQEKGSKPLSGPVAAGQLLKRPELTYDAIIHILGEEHRLSGEAARQVEIQIK 546 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y +Q+ + ++ K E + +P+D Y L LS E EKL ++P ++ QAS+I G+ Sbjct: 547 YQGYIEKQLQQIEKYKKMENKALPEDLPYCDLDGLSTEAVEKLMKIRPRSVGQASRISGV 606 Query: 602 TPAALNLLLIYIKKNTVK 619 +PA + +LL+Y+++ + Sbjct: 607 SPADIAVLLVYMEQRRRR 624 >gi|17548045|ref|NP_521447.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ralstonia solanacearum GMI1000] gi|21263662|sp|Q8XU65|MNMG_RALSO RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|17430351|emb|CAD17116.1| probable trna uridine 5-carboxymethylaminomethyl modification enzyme gida(glucose-inhibited division protein a) [Ralstonia solanacearum GMI1000] Length = 647 Score = 786 bits (2030), Expect = 0.0, Method: Composition-based stats. Identities = 286/630 (45%), Positives = 383/630 (60%), Gaps = 15/630 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNP+IGG+GKGHLV+E+DA Sbjct: 6 EFDVIVVGGGHAGTEAALAAARMGCQTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D GIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Q V Sbjct: 66 LGGAMALATDEGGIQFRILNSSKGPAVRATRAQADRVLYKAAIRHRLENQPNLMLFQQAV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + + V Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 126 EDLLVEGDRVVGAVTQVGVRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSA 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMT-DKITNRQIECGI 242 + GRLKTGTP R+DG+TI + E Q D +P FSF+ + RQ+ C + Sbjct: 186 RLKELKLPQGRLKTGTPPRIDGRTIDFSVLEAQPGDLDPVPVFSFLGRTDMHPRQVPCWV 245 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T Sbjct: 246 THTNERTHDIIRAGLNRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLTT 305 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + YPNG+ST+LP ++Q I ++ GLE +I+RPGYAIEYDY +P+ L +LE+K I G Sbjct: 306 NEFYPNGVSTSLPFDVQLDLIHSMRGLEHAHILRPGYAIEYDYFDPRGLKASLESKAIGG 365 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AGIN+ + R +Y+GV++DDL ++GV E Sbjct: 366 LFFAGQINGTTGYEEAAAQGLLAGINAGLQVQGKAAWTPRRDQAYLGVLVDDLITRGVTE 425 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAE+R+SLR DNAD RLT G LG + + R F + + LKS Sbjct: 426 PYRMFTSRAEFRLSLREDNADMRLTEAGRDLGVVDDARWDAFNRKRDAVSRETERLKSTW 485 Query: 483 LTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLF-----SICPDA-----RKFS 529 + L + + K + + + L P+ + ++L PDA + Sbjct: 486 VNPAILPAADAEPVLGKGIEREYSLADLLRRPNVTYESLMGMQGGKYAPDAPLADEPLLA 545 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 + E+++I Y Y RQ E + + E +P DFDY + LS E+++KL+ KP Sbjct: 546 EQIREQIEIGIKYHGYIARQADEVERLGANENTRLPADFDYKQVRGLSIEVQQKLAQHKP 605 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 + QAS+I G+TPAA++LLL+++KK ++ Sbjct: 606 ETIGQASRISGITPAAVSLLLVHLKKGVLR 635 >gi|294341939|emb|CAZ90368.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA (Glucose-inhibited division protein A) [Thiomonas sp. 3As] Length = 644 Score = 786 bits (2029), Expect = 0.0, Method: Composition-based stats. Identities = 296/631 (46%), Positives = 393/631 (62%), Gaps = 15/631 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 R++DV+VIGGGHAG EAA AA++G +T L+TH T+G MSCNP+IGG+GKGHLV+E+D Sbjct: 5 RNFDVVVIGGGHAGTEAALAAARMGCATLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D AGIQFR+LN KGPAVR R QADR+LY+ A++ + Q NL + Q Sbjct: 65 ALGGAMAEATDEAGIQFRILNASKGPAVRATRAQADRQLYKRAIRGRLEDQPNLWLFQQA 124 Query: 124 VAGFNTEKN----IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 E ++++V Q R TVVLT GTFL G IHIG + AGR GD PS Sbjct: 125 ADDLLVESTGQAERVTAVVTQTGIRFRTRTVVLTAGTFLDGKIHIGLDQYAAGRAGDPPS 184 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITNR-Q 237 L GRLKTGTPAR+DG+TI + K +Q D +P FSF+ + Q Sbjct: 185 LRLSARLKALALPQGRLKTGTPARIDGRTIDFSKLIEQPGDLNPMPVFSFLGSADQHPAQ 244 Query: 238 IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 + C IT T +TH II + S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEP Sbjct: 245 VACWITHTTEQTHDIIRAGLDRSPMFTGVIEGVGPRYCPSIEDKIHRFADKSSHQIFLEP 304 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EGL T+ YPNGIST+LP ++Q + +IPGLE +++RPGYAIEYDY NP L +LET Sbjct: 305 EGLQTNEFYPNGISTSLPFDVQIAMVHSIPGLENAHLLRPGYAIEYDYFNPMALKTSLET 364 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 K I GLF AGQINGTTGYEEAAAQGL+AGIN+A + D C R +Y+GV++DDL + Sbjct: 365 KSIDGLFFAGQINGTTGYEEAAAQGLLAGINAALQVQGRDPWCPRRDQAYLGVLVDDLVT 424 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL 477 KGV EPYRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F + Sbjct: 425 KGVSEPYRMFTSRAEYRLSLREDNADLRLTEIGRELGVVNDARWDAFCRKRDAIEREIQR 484 Query: 478 LKSLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLF-----SICPDARKFS 529 L++ +T ++L + ++ K + + L P+ L + P+ Sbjct: 485 LRTTWVTPQSLPPEQAEALLGKSIEREYNLADLLRRPELRYDTLAAFPHPAFAPEFP-LG 543 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 E+++I YA Y RQ E + +E +P D DY + LS E+++KL+ +P Sbjct: 544 ETEREQVEIHLKYAGYIERQQDEVERAAQQESLRLPADLDYREVSGLSIEVQQKLNQARP 603 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKKNTVKL 620 L AS++ GMTPAA++LLLI+++K +K Sbjct: 604 ETLGLASRLSGMTPAAVSLLLIHLRKGVLKK 634 >gi|145588204|ref|YP_001154801.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|189039349|sp|A4SUS3|MNMG_POLSQ RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|145046610|gb|ABP33237.1| glucose inhibited division protein A [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 639 Score = 786 bits (2029), Expect = 0.0, Method: Composition-based stats. Identities = 285/637 (44%), Positives = 396/637 (62%), Gaps = 14/637 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 ++++DVIV+GGGHAG EAA +A++G T LITH +G+MSCNP+IGG+GKGHLV+E Sbjct: 3 YSKNFDVIVVGGGHAGTEAALASARMGCDTLLITHSIENLGAMSCNPSIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDA+ G M D AGIQFR+LN KGPAVR R Q DR LY+ A++R + +Q NL + Q Sbjct: 63 IDAMGGAMAAATDEAGIQFRILNSSKGPAVRATRAQGDRVLYKAAIRRRLENQPNLSLFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V + + + +V Q VVLT GTFL G IH+G GR GD + S Sbjct: 123 AAVDDLLVKGDEVQGVVTQMGLEFMAKKVVLTAGTFLDGKIHVGLNNYAGGRAGDPAAVS 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITNR-QIE 239 L + GRLKTGTP R+DG+TI + +Q D +P FS++ + Q+ Sbjct: 183 LSARLKELKLPQGRLKTGTPPRIDGRTIDFSVMLEQPGDLDPVPVFSYLGRPEQHPKQVP 242 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C I+ TN +TH II + S +Y+G I+ GPRYCPSIEDKI RF RN HQIFLEPEG Sbjct: 243 CWISHTNEQTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASRNSHQIFLEPEG 302 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T+ YPNGIST+LP ++Q + +R+I GLE I+RPGYAIEYD+ +P+ L +LETK Sbjct: 303 LTTNEFYPNGISTSLPFDVQWELVRSIRGLESAVIVRPGYAIEYDFFDPRHLRHSLETKA 362 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GL+ AGQINGTTGYEEAAAQG++AGIN+ + + R++SYIGV++DDL ++G Sbjct: 363 IGGLYFAGQINGTTGYEEAAAQGMLAGINAGLAAQGKEAWLPKRSESYIGVLVDDLITRG 422 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 V EPYRMFTSRAEYR+SLR DNAD RLT IG LG + + R + F + + + S LK Sbjct: 423 VQEPYRMFTSRAEYRLSLREDNADMRLTAIGRDLGLVDDYRWEVFCRKQEAVSRETSRLK 482 Query: 480 SLVLTSKNLSS---TSISFKQDGKTRTAYEFLSYPDFSIQNLFSI---------CPDARK 527 + + K+ + T + ++ E L P + + + ++ D Sbjct: 483 DIWVGPKHEIAPLVTQLLGQELSHECNLTELLRRPGITYEAITALGNRIWAPESLDDDLG 542 Query: 528 FSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSIL 587 ++ + ++++I Y Y RQ +E + E +P+ DYS + LS E+++KL++ Sbjct: 543 LAAQISDQVEISVKYQGYIERQAVEIARQEHNETFPLPEGLDYSQVLGLSKEVQQKLNLH 602 Query: 588 KPFNLLQASKIEGMTPAALNLLLIYIKKNTVKLNEIV 624 KP L QA +I G+TPAAL+LLL+++KK + E + Sbjct: 603 KPETLGQAGRISGVTPAALSLLLVHLKKGLGRTQETI 639 >gi|27262248|gb|AAN87405.1| glucose-inhibited division protein A [Heliobacillus mobilis] Length = 643 Score = 785 bits (2028), Expect = 0.0, Method: Composition-based stats. Identities = 276/624 (44%), Positives = 386/624 (61%), Gaps = 7/624 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDVIVIG GHAGCEAA AA++G T ++T + M CNPAIGG KGHLVREIDA Sbjct: 15 QYDVIVIGAGHAGCEAALAAARMGCKTLILTISWDNVALMPCNPAIGGPAKGHLVREIDA 74 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG DA IQ R+LN KGPAV R QAD++ Y+ M + + QENLDV Q V Sbjct: 75 LGGQMGVTIDATAIQIRMLNTGKGPAVHALRAQADKKKYQQYMIQVLEHQENLDVRQAMV 134 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ Q + VV+T+GT+L+G I IG L P G G PS L Sbjct: 135 ETIRVEDGQVQGVLTQTGAFFAAPNVVITSGTYLKGRIIIGDLHYPGGPNGYFPSTELAA 194 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 S + GR KTGTPAR+DG+T+ + K +Q D + FSF++ + +QI C +T Sbjct: 195 SLREVGVQLGRFKTGTPARVDGRTVDFTKMVEQPGDSDPLNFSFISSRFERKQISCWLTY 254 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETH+II +N+ S +Y+G I+ GPRYCPSIEDK+VRF ++ HQ+F+EPEG +T Sbjct: 255 TTEETHQIIRDNLHRSPLYAGVIEGTGPRYCPSIEDKVVRFADKKSHQVFVEPEGADTHE 314 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+ST+LPE+IQ +R+I G+E V IIRPGYAIEYDY+ P +L +LE + I GLF Sbjct: 315 MYVQGMSTSLPEDIQLAMLRSIIGMENVKIIRPGYAIEYDYVVPTQLKLSLEHQTIQGLF 374 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ+NGT+GYEEAAAQG++AGIN+A ++ + + R+D+YIGV+IDDL +KG EPY Sbjct: 375 TAGQVNGTSGYEEAAAQGIIAGINAACRAQGKEPLILKRSDAYIGVLIDDLVTKGTNEPY 434 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSRAEYR+ LR DNAD RLT IG +G + + R +RF + ++ + L +T Sbjct: 435 RMLTSRAEYRLLLRQDNADQRLTEIGCSIGLVDDVRYERFQRKMERVEQEKELWSKTFVT 494 Query: 485 SKNLSSTSISFKQ----DGKTRTAYEFLSYPDFSIQNLFSI---CPDARKFSSLVIERLQ 537 N+ I ++ K + ++ L P+ S +L S+ V E+++ Sbjct: 495 PGNIRLQEILEQKRSAPLTKGLSLFDLLRRPELSFDDLHSLLEYDEARETVDPEVAEQVE 554 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I + + Y +Q + + E R +P D DY+ + LS E ++KL +P +L QAS+ Sbjct: 555 ISAKFEGYLVKQQAQVERFNKLESRRVPPDLDYALIGGLSTEARQKLIARRPESLGQASR 614 Query: 598 IEGMTPAALNLLLIYIKKNTVKLN 621 I G+ PA ++LLL+Y+++ + N Sbjct: 615 ISGVNPADISLLLVYLEQRRRRDN 638 >gi|317496584|ref|ZP_07954932.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Gemella moribillum M424] gi|316913291|gb|EFV34789.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Gemella moribillum M424] Length = 627 Score = 785 bits (2028), Expect = 0.0, Method: Composition-based stats. Identities = 273/624 (43%), Positives = 381/624 (61%), Gaps = 7/624 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + YDVIVIGGGHAG EAA A++ G T +IT TIG M CNP++GG KG +VRE+D Sbjct: 6 KEYDVIVIGGGHAGIEAAHAASRKGVKTLMITINLDTIGFMPCNPSVGGPAKGIVVREVD 65 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL GLMGRVAD IQ ++LN KGPAVR R Q+D+ Y+ M+R + NLD+ Q Sbjct: 66 ALGGLMGRVADKTNIQSKMLNTAKGPAVRALRMQSDKVAYQTEMKRILEGTPNLDIEQAM 125 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E N + + + + +++TTGT+LRG I IG +K +G PS L Sbjct: 126 VRELIIENNKVVGLKTMLGTAYKAKVIIITTGTYLRGEIVIGDVKYSSGPNHQMPSIDLA 185 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + FD R KTGTP R++ ++ + +T Q D FS+ T + QI C +T Sbjct: 186 KQLEELGFDLVRFKTGTPPRVNADSVDFSQTAIQPGDNEKYAFSYETTEYVEDQIPCWLT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 TN TH II N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG NT Sbjct: 246 YTNTTTHEIIDRNLGRSAMYSGVIKGTGPRYCPSIEDKYVRFNDKERHQLFLEPEGRNTK 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 +Y G+ST+LP+++QH +R+I GLE IIR GYAIEYD +NP L+PTLETK I GL Sbjct: 306 EIYIQGLSTSLPDDVQHDMVRSIAGLENAVIIRNGYAIEYDAVNPMTLWPTLETKLIDGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 F AGQINGT+GYEEAA QG++AGIN+A K + + R ++YIGV+IDDL +KG EP Sbjct: 366 FTAGQINGTSGYEEAAGQGIMAGINAACKILGEEPMTLGRDEAYIGVLIDDLVTKGTNEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YR+ TSRAE+R+ LR DNAD RLT G + E R ++F++ Q LK+ + Sbjct: 426 YRLLTSRAEHRLLLRHDNADMRLTEKAYNYGLVTEERYRKFSEKRQAVADEIERLKTFRI 485 Query: 484 TS-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 T + L + + +DG A + L P+ S +N+ + D+ ++E+++I Sbjct: 486 TPTANTLEKLVELNSAEIRDGI--LAIDMLRRPELSHKNVMYLADDSTILPKDIVEQVEI 543 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 E Y Y + + + +++K IP D DY +P+L+ E +EKL + P + QAS+I Sbjct: 544 EVKYEGYIKKSLQQVEKLKKMNAMKIPSDLDYDEVPSLAIEAREKLKKVLPLTIGQASRI 603 Query: 599 EGMTPAALNLLLIYIKKNTVKLNE 622 G+ PA +++LL+++++ NE Sbjct: 604 SGVNPADISILLVFLEQRRGMNNE 627 >gi|15896964|ref|NP_350313.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium acetobutylicum ATCC 824] gi|21263674|sp|Q97CW3|MNMG_CLOAB RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|15026840|gb|AAK81653.1|AE007868_9 Glucose-inhibited division protein, GIDA (NAD/FAD-utilizing enzyme) [Clostridium acetobutylicum ATCC 824] gi|325511141|gb|ADZ22777.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium acetobutylicum EA 2018] Length = 626 Score = 785 bits (2027), Expect = 0.0, Method: Composition-based stats. Identities = 275/615 (44%), Positives = 390/615 (63%), Gaps = 3/615 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + YDVIVIGGGHAGCEAA A+++G T + T +I M CNP IGG KGHLV+E Sbjct: 5 FSGDYDVIVIGGGHAGCEAALAASRMGCRTLMCTMNLDSIAMMPCNPNIGGTAKGHLVKE 64 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G MG D IQ R+LN+ KGPAV R QAD+ Y M+ + +QE+L + Q Sbjct: 65 IDALGGEMGVNIDKTFIQSRMLNISKGPAVHSLRAQADKVRYSEVMRNVLENQEDLYLRQ 124 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 EV + E + IV ++ + +T+VL TGT+LR I IG++ G G P+N Sbjct: 125 IEVISLDIEDGKVKGIVTKNGACFTANTIVLATGTYLRSRIIIGEVNYSGGPSGLFPANE 184 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L S + R KTGTPAR++ +++ + K +Q DER+IPFSF+ DK+ QI C Sbjct: 185 LSQSLIDVGIKLRRFKTGTPARINKRSVDFSKMVEQPGDERIIPFSFLNDKLEKEQISCY 244 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN +TH +I ENI S +Y+G IKS GPRYCPSIEDK++RF ++ HQIF+EPEG N Sbjct: 245 LTYTNEKTHEVIKENIDRSPLYNGTIKSVGPRYCPSIEDKVMRFPDKQQHQIFIEPEGEN 304 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ +Y G+S++LPEE+Q + ++T+PGLE V I++ YAIEYD I+P +L +LE K + Sbjct: 305 TNDLYVGGMSSSLPEEVQIKMLKTVPGLEDVEILKTAYAIEYDCIDPTQLKLSLEFKDVK 364 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQ NG++GYEEAA+QG++AGIN+A + + R+D YIGV+IDDL +KG Sbjct: 365 GLFGAGQFNGSSGYEEAASQGIIAGINAALMVKNKEPLILGRSDGYIGVLIDDLVTKGTN 424 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRM TSRAEYR+ LR DNAD RLT +G K+G + E R ++F + LK + Sbjct: 425 EPYRMMTSRAEYRLLLRQDNADLRLTELGHKIGLVDENRYEKFIGRKNAIEEELNRLKKV 484 Query: 482 VLTSKNLSS---TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 +T+K + + K + YE + P+ L ++ D + + +I+ + I Sbjct: 485 QITNKKEVNDFLEGLGSVSLKKPISLYELIRRPELDYDKLQTLDIDRKDLAQDIIDEVNI 544 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 Y Y +Q+ + + K EKR+IP+D DY+S+ L E +KLS L+P NL QAS+I Sbjct: 545 MIKYEGYIEKQLEQVDQFKKFEKRVIPEDIDYNSIKNLRTEAIQKLSKLRPVNLGQASRI 604 Query: 599 EGMTPAALNLLLIYI 613 G++P+ +++L+IY+ Sbjct: 605 SGVSPSDISVLMIYL 619 >gi|251778676|ref|ZP_04821596.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082991|gb|EES48881.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 626 Score = 784 bits (2026), Expect = 0.0, Method: Composition-based stats. Identities = 279/616 (45%), Positives = 395/616 (64%), Gaps = 3/616 (0%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALD 66 DVIV+G GHAGCEAA +A++G +T + T +I M CNP IGG KGHLVREIDAL Sbjct: 11 DVIVVGAGHAGCEAALASARMGLNTLICTINLDSIAMMPCNPNIGGTAKGHLVREIDALG 70 Query: 67 GLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAG 126 G MG D IQ R+LN KGPAV R QAD++ Y+ M+R + QENL + Q EV Sbjct: 71 GEMGVNIDHTFIQSRMLNTSKGPAVHSLRAQADKKDYQFRMKRVLEEQENLQIRQIEVTE 130 Query: 127 FNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSF 186 E N + I+ ++ ++ R V+L TGT+L+G I IG++ G G P+N L S Sbjct: 131 LLVEGNKVIGIITRNGAIFRSKAVILATGTYLKGKIIIGEVSYSGGPNGLFPANDLSQSL 190 Query: 187 MKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTN 246 + R KTGTPAR++ +++ + K +Q D++++PFSFM+ I QI C +T TN Sbjct: 191 LDLGISLRRFKTGTPARINRRSVDFSKMIEQPGDDKIVPFSFMSGNIDKEQISCYLTYTN 250 Query: 247 LETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVY 306 +TH +I ENI S IY+G IK GPRYCPSIEDK++RF ++ HQIF+EPEGL+T +Y Sbjct: 251 EQTHNVIKENIGRSPIYNGSIKGVGPRYCPSIEDKVMRFPDKLQHQIFVEPEGLDTLEMY 310 Query: 307 PNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLA 366 G+S++LPEE+Q + +RT+PGLE V I+R YAIEYD ++P EL PTLE K + GL+ A Sbjct: 311 VGGMSSSLPEEVQLKMMRTLPGLENVEIMRTAYAIEYDSVDPTELEPTLEFKNVEGLYGA 370 Query: 367 GQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRM 426 GQ NG++GYEEA AQGLVAGIN+A K D + +R+D+YIGV+IDDL +KG EPYRM Sbjct: 371 GQFNGSSGYEEAGAQGLVAGINAALKIKGEDPMILTRSDAYIGVLIDDLVTKGTNEPYRM 430 Query: 427 FTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSK 486 TSRAEYR+ LR DNAD RLT IG K+G + E R + F LK L +T+K Sbjct: 431 MTSRAEYRLILRQDNADFRLTEIGKKVGLVTEERYETFLNRKNTIENELERLKKLQITNK 490 Query: 487 NLSST---SISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 ++ ++ + K + YE + P+ +L + + + S + E++ I + Y Sbjct: 491 RETNEFLLAVGSAELKKPISFYELIKRPEVDYFSLKDLDMEREELSEDIGEQINIIAKYE 550 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y Q+ + + + EK+L+PKD DYS++ L E ++KL+ ++P ++ QAS+I G++P Sbjct: 551 GYISNQLEQVAQFRKFEKKLLPKDIDYSNVKGLRTEAEQKLNSIRPISIGQASRISGVSP 610 Query: 604 AALNLLLIYIKKNTVK 619 A +++LLIY++ K Sbjct: 611 ADISVLLIYLEHYYNK 626 >gi|304318132|ref|YP_003853277.1| glucose inhibited division protein A [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302779634|gb|ADL70193.1| glucose inhibited division protein A [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 623 Score = 784 bits (2026), Expect = 0.0, Method: Composition-based stats. Identities = 273/617 (44%), Positives = 382/617 (61%), Gaps = 4/617 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDV VIG GHAGCEAA A+LG T +I M CNPAIGG K +LVREIDA Sbjct: 7 SYDVAVIGLGHAGCEAALATARLGLKTVAFAINLDSIALMPCNPAIGGPAKTNLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D IQ R LN KGPAVR R Q+D++ Y+ M+ + QENLD+ Q EV Sbjct: 67 LGGQMAINTDETLIQERTLNTSKGPAVRALRAQSDKKRYQFNMKYTLEKQENLDIKQAEV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + S++ ++ + C + ++TTGT+LRG I IG + G G P+N L Sbjct: 127 VDIEVENGEVKSVITKNGARYLCKSCIVTTGTYLRGRIIIGDVSYSGGPNGLFPANELSK 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + + R KTGTPAR+D K+I +D E Q DE++ PFS++ D+I QI C +T Sbjct: 187 CLERLNIKLMRFKTGTPARVDKKSINFDAMEIQPGDEKIKPFSYLHDEINVEQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH +IM NI S +YSG+IK GPRYCPSIEDK+V+F ++ HQ+F+EPEG NT+ Sbjct: 247 TNSRTHEVIMRNIGRSPLYSGEIKGVGPRYCPSIEDKVVKFPDKPRHQLFIEPEGRNTNE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+S+++PE++Q +F+RTI GLE V ++RPGYAIEYD I+P +L +LE K ISGLF Sbjct: 307 MYVQGMSSSMPEDVQIEFLRTIKGLENVKVMRPGYAIEYDCIDPTQLKQSLELKTISGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ+NGT+GYEEAAAQGL+AGIN+A K + R+++YIGV+IDDL +KG EPY Sbjct: 367 FAGQVNGTSGYEEAAAQGLMAGINAAMKLLNREPFILDRSEAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSRAEYR+ LR DNAD RLT G ++G + + R +RF K +Y LK+ ++ Sbjct: 427 RMLTSRAEYRLILRQDNADFRLTEKGRQIGLVDDERYERFLKKKIQYEKEMERLKTAMIV 486 Query: 485 SKNLSSTSISFKQDGKTRTA---YEFLSYPDFSIQNLFSICPDARK-FSSLVIERLQIES 540 + + + K T Y+ L P+ + I D + V E++ I Sbjct: 487 PSDFVNEYLKSKGSSPIVTGITMYDLLKRPEIDYISSKVIDKDRPEDIRDDVAEQIDINI 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y +Q+ + ++ K E + IP +Y + +S E ++KL + P ++ QAS+I G Sbjct: 547 KYEGYIKKQLEQVEKFKALENKKIPSWINYDDIKGISIEARQKLKSIMPTSVGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNT 617 ++PA ++++LIY++ Sbjct: 607 VSPADISVILIYMQSRR 623 >gi|300689821|ref|YP_003750816.1| glucose-inhibited division protein A, tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Ralstonia solanacearum PSI07] gi|299076881|emb|CBJ49494.1| Glucose-inhibited division protein A, tRNA uridine 5-carboxymethylaminomethyl modification enzyme [Ralstonia solanacearum PSI07] Length = 647 Score = 784 bits (2026), Expect = 0.0, Method: Composition-based stats. Identities = 287/630 (45%), Positives = 387/630 (61%), Gaps = 15/630 (2%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNP+IGG+GKGHLV+E+DA Sbjct: 6 EFDVIVVGGGHAGTEAALAAARMGCQTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D GIQFR+LN KGPAVR R QADR LY+ A++R + +Q NL + Q V Sbjct: 66 LGGAMALATDEGGIQFRILNSSKGPAVRATRAQADRVLYKAAIRRRLENQPNLMLFQQAV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + V Q R VVLT GTFL G IH+G GR GD + SL Sbjct: 126 EDLLVEGDRAVGAVTQVGVRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAVSLSA 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTD-KITNRQIECGI 242 + GRLKTGTP R+DG+TI + E+Q D +P FSF+ + RQ+ C + Sbjct: 186 RLKELKLPQGRLKTGTPPRIDGRTIDFSVLEEQPGDLDPVPVFSFLGRADMHPRQVPCWV 245 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL T Sbjct: 246 THTNQHTHDIIRAGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLTT 305 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + YPNG+ST+LP ++Q I ++ GLE +I+RPGYAIEYDY +P+ L +LE+K I G Sbjct: 306 NEFYPNGVSTSLPFDVQLDLIHSMRGLENAHILRPGYAIEYDYFDPRGLKASLESKAIGG 365 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AGIN+ + + R +Y+GV++DDL ++GV E Sbjct: 366 LFFAGQINGTTGYEEAAAQGLLAGINAGLQVQGKEAWTPRRDQAYLGVLVDDLITRGVTE 425 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAE+R+SLR DNAD RLT G LG + + R F + + LKS Sbjct: 426 PYRMFTSRAEFRLSLREDNADMRLTEAGRGLGVVDDVRWDAFNRKRDAVSRETERLKSTW 485 Query: 483 LTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLF-----SICPDA-----RKFS 529 ++ L + + K + + + L P+ + ++L P+A + Sbjct: 486 VSPAILPVADAEPVLGKGIEREYSLADLLRRPNVTYESLMGMQGAKYAPEAPLADEPLLA 545 Query: 530 SLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKP 589 V E+++I Y Y RQ E + + E +P DFDY+ + LS E+++KL+ KP Sbjct: 546 EQVREQIEIGIKYHGYIARQADEVERLGANESTRLPADFDYTQVRGLSIEVQQKLAQHKP 605 Query: 590 FNLLQASKIEGMTPAALNLLLIYIKKNTVK 619 + QAS+I G+TPAA++LLL+++KK ++ Sbjct: 606 ETIGQASRISGITPAAVSLLLVHLKKGVLR 635 >gi|254468635|ref|ZP_05082041.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [beta proteobacterium KB13] gi|207087445|gb|EDZ64728.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [beta proteobacterium KB13] Length = 634 Score = 784 bits (2026), Expect = 0.0, Method: Composition-based stats. Identities = 294/625 (47%), Positives = 404/625 (64%), Gaps = 4/625 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +YDVIVIGGGHAG EA+ AA++G T LITH T+G MSCNP+IGG+GKGHLV+E Sbjct: 4 FDSNYDVIVIGGGHAGTEASLAAARMGQKTLLITHNIDTLGQMSCNPSIGGIGKGHLVKE 63 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G+M + AD AGI FR+LN KGPAVR R QADR LYR A++ + +Q+NL + Q Sbjct: 64 IDALGGVMAKAADQAGIHFRMLNASKGPAVRATRAQADRVLYRKAIKHHLENQDNLSIFQ 123 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V +++ + +V + +V+LT GTFL GV+H+G AGR GD S + Sbjct: 124 QPVDDLIIKEDQVQGVVTESGIHFYAKSVILTAGTFLDGVVHVGLKNYQAGRAGDPSSKT 183 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIEC 240 L + + + GRLKTGTP R+DG++I + E+Q D FS + + + QI C Sbjct: 184 LAHRLNQLNLPVGRLKTGTPPRIDGRSIDYSVMEEQPGDAPTPYFSLQSPLLEHPEQISC 243 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN TH II + S +Y+G I+ GPRYCPSIEDKI RF +++ HQIFLEPEGL Sbjct: 244 WITHTNSATHNIIRSGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFADKDSHQIFLEPEGL 303 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T +YPNGIST+LP ++Q++ +R+I GLE+ I RPGYAIEY+Y +P+ L +L+TK I Sbjct: 304 TTHEIYPNGISTSLPFDVQYELVRSIKGLEQAYITRPGYAIEYNYFDPRNLQSSLQTKTI 363 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQINGTTGYEEAAAQGLVAGIN+A K+ C R +SYIGVMIDDL ++GV Sbjct: 364 EGLFFAGQINGTTGYEEAAAQGLVAGINAALKAQNKPSWCPKREESYIGVMIDDLITRGV 423 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT G LG + + + RF K Q + +++K Sbjct: 424 TEPYRMFTSRAEYRLLLREDNADQRLTSAGYDLGVVNQTQYDRFMKKDQGIHSCLNIMKK 483 Query: 481 LVLTSKNLSS---TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 V + + + I K+ + + Y+ + P+ + + L + + +IE+ + Sbjct: 484 TVTKPEAIPADDQQRIFGKKLEREYSIYDLIKRPNVNWKQLQDFMRLDQDYDDQIIEQAE 543 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I + Y+ Y RQ E +I+ + IPK+ ++ + LSNE +K + P N+ QASK Sbjct: 544 ISAKYSGYISRQSDEILKIQSQYAMKIPKNMNFEDISGLSNEAVQKFKDVMPENIQQASK 603 Query: 598 IEGMTPAALNLLLIYIKKNTVKLNE 622 I G+TPA + LL++Y+KK+ VK ++ Sbjct: 604 ISGITPANIALLVVYLKKSAVKQDK 628 >gi|319778790|ref|YP_004129703.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Taylorella equigenitalis MCE9] gi|317108814|gb|ADU91560.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Taylorella equigenitalis MCE9] Length = 631 Score = 784 bits (2026), Expect = 0.0, Method: Composition-based stats. Identities = 311/624 (49%), Positives = 404/624 (64%), Gaps = 12/624 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DVIV+GGGHAG EAA +A+ GA T L+TH TIG MSCNP+IGG+GKGHLV+E+D Sbjct: 5 QEFDVIVVGGGHAGTEAALASARTGAKTLLLTHNIETIGQMSCNPSIGGIGKGHLVKELD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M AD AGIQFR+LN KGPAVR R QADR LY+ A++ +I +Q+NL V Q Sbjct: 65 ALGGAMALAADEAGIQFRILNSSKGPAVRATRIQADRLLYKQAIRSKIENQQNLFVFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + + + Q + +VVLT GTFL G+IHIG GR GD PS SL Sbjct: 125 VEDLILEGDTVVGAITQIGYKFKSKSVVLTAGTFLNGLIHIGLTHYKGGRAGDPPSKSLA 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFM-TDKITNRQIECG 241 + + GRLKTGTP RLD ++I + K +Q D IP FSFM ++++ +QI C Sbjct: 185 DRLKELKLPQGRLKTGTPPRLDSRSIDFSKLIEQKGDTNPIPVFSFMGSEEMHPKQISCW 244 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT TN TH IIME + S +Y+G I GPRYCPSIEDKI RF R+ HQIFLEPEGL Sbjct: 245 ITHTNPNTHEIIMEGLDRSPLYTGVIDGVGPRYCPSIEDKIHRFSHRDSHQIFLEPEGLL 304 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ +YPNG+ST+LP +IQ +FI++I GLE I+RPGYAIEYDY +P+E+ +LETK I Sbjct: 305 TNEIYPNGMSTSLPFDIQLRFIQSINGLENAYILRPGYAIEYDYFDPREIKGSLETKSIK 364 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQINGTTGYEEAAAQGL+AG+N+AR + + R +Y+GV+IDDL +KGV Sbjct: 365 GLFFAGQINGTTGYEEAAAQGLIAGLNAARYTRGEEPWYPRRDQAYLGVLIDDLITKGVS 424 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+SLR DNAD RLT IG KLG + ++R + F K + L+ Sbjct: 425 EPYRMFTSRAEYRLSLREDNADYRLTEIGRKLGLVDDQRWETFDKKRENIEREIQRLRDF 484 Query: 482 VLTSKNLSSTSIS---FKQDGKTRTAYEFLSYPDFSIQNLFSI-------CPDARKFSSL 531 LTSK +S+ + K K T + L P+ S + L ++ + + Sbjct: 485 RLTSKLISNDEVISKFGKPFEKDYTLEDLLKRPNISYEMLMNLNLSGDISAKSSTNLTDK 544 Query: 532 VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFN 591 IE+++I++ Y Y RQ E E IPK +Y L LS E+++KL P Sbjct: 545 EIEQIEIQTKYQGYISRQKEEVDRTLNYENLRIPKGINYDDLVHLSFEVRQKLKEHMPET 604 Query: 592 LLQASKIEGMTPAALNLLLIYIKK 615 + QAS+I G+TPAA++LLLI+IK+ Sbjct: 605 IGQASRISGVTPAAISLLLIHIKR 628 >gi|171462843|ref|YP_001796956.1| glucose inhibited division protein A [Polynucleobacter necessarius subsp. necessarius STIR1] gi|238692827|sp|B1XSC4|MNMG_POLNS RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|171192381|gb|ACB43342.1| glucose inhibited division protein A [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 640 Score = 784 bits (2025), Expect = 0.0, Method: Composition-based stats. Identities = 284/628 (45%), Positives = 394/628 (62%), Gaps = 14/628 (2%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 ++++DVIV+GGGHAG EAA +A++G T LITH +G+MSCNP+IGG+GKGHLV+E Sbjct: 3 YSKNFDVIVVGGGHAGTEAALASARMGCDTLLITHSIENLGAMSCNPSIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDA+ G M D AGIQFR+LN KGPAVR R Q DR LY+ A++R + +Q NL + Q Sbjct: 63 IDAMGGAMAAATDEAGIQFRILNSSKGPAVRATRAQGDRVLYKAAIRRRLENQPNLSLFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V + + + +V Q VVLT GTFL G IH+G GR GD + S Sbjct: 123 AAVDDLPVKGDEVQGVVTQMGLEFMAKKVVLTAGTFLDGKIHVGLNNYAGGRAGDPAAVS 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDKITNR-QIE 239 L + GRLKTGTP R+DG TI + +Q D +P FS++ + Q+ Sbjct: 183 LSARLKELKLPQGRLKTGTPPRIDGLTIDFSVMLEQPGDLDPVPVFSYLGRPEQHPKQVP 242 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C I+ TN +TH II + S +Y+G IK GPRYCPSIEDKI RF RN HQIFLEPEG Sbjct: 243 CWISHTNEKTHDIIRGGLDRSPMYTGVIKGVGPRYCPSIEDKIHRFASRNSHQIFLEPEG 302 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T+ YPNGIST+LP ++Q +R+I G+E I+RPGYAIEYD+ +P++L +LETK Sbjct: 303 LTTNEFYPNGISTSLPFDVQWDLVRSIRGMESAVIVRPGYAIEYDFFDPRQLRHSLETKV 362 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GL+ AGQINGTTGYEEAAAQG++AGIN+ + + R++SYIGV++DDL ++G Sbjct: 363 IGGLYFAGQINGTTGYEEAAAQGMLAGINAGLAAKGKEPWLPKRSESYIGVLVDDLIARG 422 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 V EPYRMFTSRAEYR+SLR DNAD RLT IG LG + + R F + + + S L+ Sbjct: 423 VQEPYRMFTSRAEYRLSLREDNADMRLTAIGRDLGLVDDYRWGVFCRKQEAVSRETSRLQ 482 Query: 480 SLVLTSKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLFSI---------CPDARK 527 ++ + K+ ++ +S D + E L P + +++ ++ + Sbjct: 483 NIWVGPKSEAAPFVSQLLDQDLSHESSLAELLRRPGVTYESIIALGDGMWAPETLDEDLG 542 Query: 528 FSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSIL 587 ++ + ++++I Y Y RQ E + E L+P+ DYS + LS E+++KL++ Sbjct: 543 LAAQISDQVEISVKYQGYIERQATEIARQEHNETLLLPESLDYSQVIGLSKEVQQKLNLH 602 Query: 588 KPFNLLQASKIEGMTPAALNLLLIYIKK 615 KP L QA +I G+TPAAL+LLL+++KK Sbjct: 603 KPETLGQAGRISGVTPAALSLLLVHLKK 630 >gi|153854262|ref|ZP_01995561.1| hypothetical protein DORLON_01555 [Dorea longicatena DSM 13814] gi|149753037|gb|EDM62968.1| hypothetical protein DORLON_01555 [Dorea longicatena DSM 13814] Length = 636 Score = 784 bits (2025), Expect = 0.0, Method: Composition-based stats. Identities = 271/618 (43%), Positives = 383/618 (61%), Gaps = 9/618 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDV+VIG GHAGCEAA A+LG T + T +I M CNP IGG KGHLVRE+DA Sbjct: 14 KYDVVVIGAGHAGCEAALATARLGFQTLVFTVSVDSIAMMPCNPNIGGSSKGHLVRELDA 73 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+V D IQ ++LN KGPAV R QAD+ +Y M+R + +QENL++ QGEV Sbjct: 74 LGGEMGKVIDRTFIQSKMLNKSKGPAVHSLRAQADKAVYSRTMRRVLEAQENLEIKQGEV 133 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 A E I+ + + C V++ +GT+L+ G + G G +N L + Sbjct: 134 ANLLVEDGKITGVQTFSGATYHCKAVIICSGTYLKARCIYGDVSQYTGPNGLQAANHLTD 193 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGI 242 + R KTGTPAR+D KT+ + K E+QF DER++PFSF T D + Q C + Sbjct: 194 CLKELGIKMYRFKTGTPARVDRKTVDFSKMEEQFGDERVVPFSFTTNPDDVQIDQASCWL 253 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II N+ S +YSG I+ GPRYCPSIEDK+V+F ++ HQ+FLEPEGL T Sbjct: 254 TYTNETTHEIIRANLDRSPLYSGMIEGTGPRYCPSIEDKVVKFADKKRHQVFLEPEGLET 313 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 D +Y G+S++LPE++Q+ R++PGLE V I+R YAIEYD I+ ++L P+LE + ISG Sbjct: 314 DEMYIGGMSSSLPEDVQYAMYRSVPGLEHVKIVRNAYAIEYDCIDARQLKPSLEFRNISG 373 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQ NG++GYEEAAAQGL+AGIN+ARK + + R+++YIGV+IDDL +K E Sbjct: 374 LFSAGQFNGSSGYEEAAAQGLIAGINAARKLQGKESLVLDRSEAYIGVLIDDLVTKESHE 433 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRM TSRAEYR+ LR DNAD RLT G ++G I + R R + + LK+ Sbjct: 434 PYRMMTSRAEYRLLLRQDNADQRLTEKGYEVGLISQERYDRLKEKERLIESEIERLKNAY 493 Query: 483 L-TSKNLSSTSISFK--QDGKTRTAYEFLSYPDFSIQNLFSIC---PDAR-KFSSLVIER 535 + TS+ + S++ + E + P+ S + + +I P+ ++ VIE+ Sbjct: 494 VGTSEKVQELLESYESTPLNSGSSLAELIRRPELSYEAVTAIDVTRPELPKDLAAEVIEQ 553 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 + I Y Y RQ + ++ K E + IP+D DY ++ +L E +KL +P ++ QA Sbjct: 554 VDISLKYDGYIQRQKRQVEQFKKMENKKIPEDMDYDAVNSLRIEAVQKLKEYRPVSIGQA 613 Query: 596 SKIEGMTPAALNLLLIYI 613 S+I G++PA +++LL+Y+ Sbjct: 614 SRISGVSPADISVLLVYL 631 >gi|150392472|ref|YP_001322521.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Alkaliphilus metalliredigens QYMF] gi|166989733|sp|A6TXE4|MNMG_ALKMQ RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|149952334|gb|ABR50862.1| glucose inhibited division protein A [Alkaliphilus metalliredigens QYMF] Length = 630 Score = 784 bits (2024), Expect = 0.0, Method: Composition-based stats. Identities = 268/620 (43%), Positives = 383/620 (61%), Gaps = 3/620 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 ++DVIV+G GHAGCEAA AA++GA T ++T +I M CNP+IGG GKGHLVREIDA Sbjct: 7 TFDVIVVGAGHAGCEAALAAARMGAKTLMLTMTLDSIAMMPCNPSIGGTGKGHLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 + G MG D IQ R+LN KGPAV R QAD+ Y M++ I ++ NL + Q EV Sbjct: 67 IGGEMGINTDKTFIQSRMLNTGKGPAVHSLRAQADKNKYHTEMKKTIENEPNLLLKQAEV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E N + +V + + +V+L TG +LRG I+IG++ +G G PS L Sbjct: 127 VDLIIEDNTVKGVVTRSGASFYSHSVILATGVYLRGKIYIGEVNYESGPNGLFPSMHLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 K + R KTGTPAR+ ++ + K E+ DE ++PFSFM D I +Q+ C +TR Sbjct: 187 KLTKLGCNMRRFKTGTPARIHQDSVDFSKMEEHLGDEEIVPFSFMNDGIEKKQVPCWLTR 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T ETHR+IMEN+ SA+Y GD++S GPRYCPSIEDK+VRF ++ HQIF+EPEGL+T Sbjct: 247 TTGETHRVIMENLNRSAMYRGDMESVGPRYCPSIEDKVVRFSDKPSHQIFIEPEGLDTKE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+ST+LPEE+Q ++T+ GLE I+RP YAIEYD I+P +L PTLE K I LF Sbjct: 307 MYVQGMSTSLPEEVQDAMLKTVIGLESAVIMRPAYAIEYDCIDPTQLKPTLEVKHIENLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 GQ NGT+GYEEAAAQGL+AGIN+ K+ + R+++YIGV+IDDL +KG EPY Sbjct: 367 SGGQFNGTSGYEEAAAQGLMAGINAVLKTKGEEPFVLDRSEAYIGVLIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSRAEYR+ LR DNAD RLT K+G + R +R+ + LK ++ Sbjct: 427 RMMTSRAEYRLILRQDNADMRLTEKSYKIGLASKERLERYLLKKSHIEEEITRLKKTNVS 486 Query: 485 SKNLSSTSISFKQD--GKTRTAYEFLSYPDFSIQNLFSICPDAR-KFSSLVIERLQIESS 541 + + K + Y+ L P+ + + L I + E+ +I Sbjct: 487 PEKANPILEENKSSLIKAGMSLYDLLKRPEVTYKVLKKIDENRNVDIVRDAQEQCEIIIK 546 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y +Q+ + + K E +++P++ DY + L E ++KLS ++P ++ QAS+I G+ Sbjct: 547 YEGYIEKQLRQIDQFKKLENKILPQEIDYHGIDGLRLEARQKLSDIQPMSVGQASRISGV 606 Query: 602 TPAALNLLLIYIKKNTVKLN 621 +P+ +++L+IY+++ + N Sbjct: 607 SPSDISVLMIYLEQRRRQKN 626 >gi|319891294|ref|YP_004148169.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus pseudintermedius HKU10-03] gi|317160990|gb|ADV04533.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus pseudintermedius HKU10-03] Length = 624 Score = 783 bits (2023), Expect = 0.0, Method: Composition-based stats. Identities = 278/624 (44%), Positives = 398/624 (63%), Gaps = 7/624 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +S+DVIV+G GH+G EA +A+ GA T ++T I M CNP++GG KG +VRE Sbjct: 1 MVKSFDVIVVGAGHSGIEAGLASARRGAHTLMLTINLDNIAFMPCNPSVGGPAKGIVVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R + ++NL+V+Q Sbjct: 61 IDALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRILEDEDNLEVMQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G V E + + + R V+LTTGTFLRG I +G LK +G PS + Sbjct: 121 GMVDELIIEDGEVKGVRTNIGTEYRAKAVILTTGTFLRGEIILGNLKYSSGPNHQLPSIT 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L + + F+ R KTGTP R++ KTI + KTE Q D+ FS+ T + Q+ C Sbjct: 181 LADHLRELGFEVVRFKTGTPPRVNAKTIDYSKTEIQPGDDVGRAFSYDTTEYILDQLPCW 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN ETH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG N Sbjct: 241 LTYTNGETHQVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRN 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ VY G+ST+LPEE+Q Q + TIPGLEK +++R GYAIEYD + P +L+PTLETK I Sbjct: 301 TNEVYVQGLSTSLPEEVQRQMLATIPGLEKADMMRAGYAIEYDALVPTQLWPTLETKMIK 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 L+ AGQINGT+GYEEAA QGL+AGIN+A + + R+D+YIGV+IDDL +KG Sbjct: 361 NLYTAGQINGTSGYEEAAGQGLMAGINAAARVLGKEETILRRSDAYIGVLIDDLVTKGTN 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAEYR+ LR DNAD RLT +G +LG I + R +RF Q+ + L+ + Sbjct: 421 EPYRLLTSRAEYRLLLRHDNADLRLTDLGHELGLISDERYERFNTKRQQITDEMARLEQI 480 Query: 482 VLTSKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 + + S +DG A E L P+ + + + I + R+ + V E++ Sbjct: 481 RVKPSERVQQIIEEKGGSRLKDGI--LAKELLRRPEMTYETIIEILEEERQLPADVEEQV 538 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I++ Y Y + + + ++K E++ IP+D DYS + +L+ E +EKL+ +KP N+ QAS Sbjct: 539 EIQTKYEGYITKSLQQVDKVKRMEQKKIPEDLDYSQIDSLATEAREKLAEVKPLNIAQAS 598 Query: 597 KIEGMTPAALNLLLIYIKKNTVKL 620 +I G+ PA +++LL+Y+++ ++ Sbjct: 599 RISGVNPADISILLVYLEQGKIQR 622 >gi|239813064|ref|YP_002941974.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Variovorax paradoxus S110] gi|259495856|sp|C5CW10|MNMG_VARPS RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|239799641|gb|ACS16708.1| glucose inhibited division protein A [Variovorax paradoxus S110] Length = 652 Score = 783 bits (2023), Expect = 0.0, Method: Composition-based stats. Identities = 298/634 (47%), Positives = 394/634 (62%), Gaps = 14/634 (2%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + +DVIV+GGGHAG EAA AA++GA T L++H T+G MSCNP+IGG+GKGHLV+ Sbjct: 2 LYPEEFDVIVVGGGHAGTEAALAAARMGAKTLLLSHNIETLGQMSCNPSIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DAL G M D AGIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL + Sbjct: 62 EVDALGGAMAIATDEAGIQFRILNSSKGPAVRATRAQADRVLYKAAIRHRLENQPNLSLF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E + + V Q R TVVLT GTFL G IH+G AGR GD P+ Sbjct: 122 QQAVDDLMVEGDRVVGAVTQVGIAFRARTVVLTAGTFLDGRIHVGLDNYQAGRAGDPPAV 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADE------RLIPFSFMTD-KI 233 SL + GRLKTGTP RLDG++I + K +Q D + FSFM + Sbjct: 182 SLSARLKELKLPQGRLKTGTPPRLDGRSIDFSKCTEQAGDGMPGGAGPMPVFSFMGRADM 241 Query: 234 TNRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQI 293 +Q+ C IT TN TH II S +++G I GPRYCPS+EDKI RF ++ HQI Sbjct: 242 HPQQMPCWITHTNARTHDIIRSGFDRSPMFTGKIDGVGPRYCPSVEDKINRFADKESHQI 301 Query: 294 FLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFP 353 FLEPEGL T+ YPNGIST+LP +IQ+Q +R++PGLE +I+RPGYAIEYDY +P+EL Sbjct: 302 FLEPEGLTTNEYYPNGISTSLPFDIQYQLVRSMPGLENAHILRPGYAIEYDYFDPRELKS 361 Query: 354 TLETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMID 413 + ET+ I GLF AGQINGTTGYEEAAAQGL AGIN+A + + R ++Y+GV++D Sbjct: 362 SFETRSIKGLFFAGQINGTTGYEEAAAQGLFAGINAALQCRGEEAWLPRRDEAYLGVLVD 421 Query: 414 DLTSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNF 473 DL +KGV EPYRMFTSRAE+R+ LR DNAD RLT G KLG + + R F++ + Sbjct: 422 DLITKGVTEPYRMFTSRAEFRLQLREDNADMRLTEAGRKLGLVDDARWDAFSRKRDTVSR 481 Query: 474 LRSLLKSLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPD----AR 526 LKS+ + +NL S + K + L PD + + L S+ Sbjct: 482 ETERLKSIWVNPRNLPAAESERVLGKAIEHEYNLADLLRRPDVNYETLMSLDGGKYSAGS 541 Query: 527 KFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSI 586 S + IE+++I + Y+ Y RQ E + E +P DFDYS + ALS E+++KL Sbjct: 542 PLSEIEIEQIEISAKYSGYIERQHDEVERAAHFENLRLPADFDYSQVKALSFEVRQKLDK 601 Query: 587 LKPFNLLQASKIEGMTPAALNLLLIYIKKNTVKL 620 +P L AS+I G+TPAA++LL+I+++K K Sbjct: 602 HRPETLGLASRISGVTPAAISLLMIHLRKGGHKA 635 >gi|188588132|ref|YP_001922716.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium botulinum E3 str. Alaska E43] gi|188498413|gb|ACD51549.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium botulinum E3 str. Alaska E43] Length = 626 Score = 783 bits (2023), Expect = 0.0, Method: Composition-based stats. Identities = 276/616 (44%), Positives = 396/616 (64%), Gaps = 3/616 (0%) Query: 7 DVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALD 66 DV+V+G GHAGCEAA +A++G +T + T +I M CNP IGG KGHLVREIDAL Sbjct: 11 DVVVVGAGHAGCEAALASARMGLNTLICTINLDSIAMMPCNPNIGGTAKGHLVREIDALG 70 Query: 67 GLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAG 126 G MG D IQ R+LN KGPAV R QAD++ Y+ M+R + QENL + Q EV Sbjct: 71 GEMGVNIDHTFIQSRMLNTSKGPAVHSLRAQADKKDYQFRMKRVLEEQENLQIRQIEVTE 130 Query: 127 FNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSF 186 E N ++ I+ ++ ++ R V+L TGT+L+G I IG++ G G P+N L S Sbjct: 131 LLVEGNKVTGIITRNGAIFRAKAVILATGTYLKGKIIIGEVSYSGGPNGLFPANDLSQSL 190 Query: 187 MKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITRTN 246 + R KTGTPAR++ +++ + K +Q D++++PFSFM+ I QI C +T TN Sbjct: 191 LDLGISLRRFKTGTPARINRRSVDFSKMIEQPGDDKIVPFSFMSKNIDKEQISCYLTYTN 250 Query: 247 LETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDVVY 306 +TH +I +NI S IY+G IK GPRYCPSIEDK++RF ++ HQIF+EPEGL+T +Y Sbjct: 251 EQTHNVIKDNIGRSPIYNGSIKGVGPRYCPSIEDKVMRFPDKLQHQIFVEPEGLDTLEMY 310 Query: 307 PNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLA 366 G+S++LPEE+Q + +RT+PGLE V I+R YAIEYD ++P EL PTLE K + GL+ A Sbjct: 311 VGGMSSSLPEEVQLKMMRTLPGLENVEIMRTAYAIEYDSVDPTELEPTLEFKNVEGLYGA 370 Query: 367 GQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPYRM 426 GQ NG++GYEEA AQGLVAGIN+A K + + +R+D+YIGV+IDDL +KG EPYRM Sbjct: 371 GQFNGSSGYEEAGAQGLVAGINAALKIKGEEPMILTRSDAYIGVLIDDLVTKGTNEPYRM 430 Query: 427 FTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLTSK 486 TSRAEYR+ LR DNAD RLT IG K+G + R + F LK L +T+K Sbjct: 431 MTSRAEYRLILRQDNADFRLTEIGKKVGLVTAERYETFLNRKNTIENELERLKKLQITNK 490 Query: 487 NLSST---SISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 ++ ++ + K + YE + P+ +L ++ + + S + E++ I + Y Sbjct: 491 RETNEFLLAVGSAELKKPISFYELIKRPEVDYFSLKNLDTEREELSEDIGEQINIIAKYE 550 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y Q+ + + + EK+L+PKD DYS++ L E ++KL+ +KP ++ QAS+I G++P Sbjct: 551 GYISNQLEQVAQFRKFEKKLLPKDIDYSNVKGLRTEAEQKLNSIKPISIGQASRISGVSP 610 Query: 604 AALNLLLIYIKKNTVK 619 A +++LLIY++ K Sbjct: 611 ADISVLLIYLEHYYNK 626 >gi|71065797|ref|YP_264524.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Psychrobacter arcticus 273-4] gi|123648515|sp|Q4FSB8|MNMG_PSYA2 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|71038782|gb|AAZ19090.1| putative glucose inhibited division protein A [Psychrobacter arcticus 273-4] Length = 632 Score = 783 bits (2022), Expect = 0.0, Method: Composition-based stats. Identities = 296/621 (47%), Positives = 393/621 (63%), Gaps = 9/621 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDV+VIGGGHAG EAA AA++GA T L+TH T+G MSCNPAIGG+GK HLVREID Sbjct: 5 KNYDVVVIGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPAIGGIGKSHLVREID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFRVLN +KG AVR R QADR LY+ A++ + +Q NLD+ Q Sbjct: 65 ALGGAMALATDKSGIQFRVLNSRKGAAVRATRAQADRILYKAAIRHTLENQPNLDIFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 E +++V + TVVLT+GTFL GVIHIG GR GD PS L Sbjct: 125 ADDILVENGRATAVVTATGIIFNTQTVVLTSGTFLGGVIHIGLESSKGGRAGDQPSIKLA 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK-ITNRQIECGI 242 + + GRLKTGTPAR+D +++ + Q D L S+M D + Q+ C I Sbjct: 185 DRLRELKLPVGRLKTGTPARIDARSVDFSVMAVQPGDTPLPVMSYMGDVSMHPEQVNCYI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II EN+ S ++SG I+ GPRYCPSIEDKI RF +++ HQIF+EPEGL T Sbjct: 245 THTNARTHDIIRENLDRSPMFSGKIEGVGPRYCPSIEDKIHRFADKDSHQIFIEPEGLTT 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +YPNGIST+LP ++Q +FI ++ GLE +I RPGYAIEYDY +P+ L PTLETK I Sbjct: 305 HELYPNGISTSLPFDVQLEFIHSMKGLENAHITRPGYAIEYDYFDPQNLKPTLETKSIDR 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSA---RKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 L+ AGQINGTTGYEEA QGL+AG N+A ++++ D R ++Y+GV++DDL + G Sbjct: 365 LYFAGQINGTTGYEEAGVQGLLAGTNAALVTCENSEFDVWTPRRDEAYLGVLVDDLITHG 424 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRMFTSRAEYR+ LR DNAD RLT G KLG + + R + + + ++ S LK Sbjct: 425 TTEPYRMFTSRAEYRLLLREDNADQRLTETGRKLGLVDDVRWQAYEEKMEAIASETSRLK 484 Query: 480 SLVLTSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 + T N T+ + + K TAY+ L P ++ +I + S V E++ Sbjct: 485 DIWATPINALGAQVTAQTGEVLSKESTAYDLLKRPQIHFNDIAAITG--SEVDSQVGEQI 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I YA Y RQ + ++K E +P DFDYS + LSNE+ +KL+ ++P L QA Sbjct: 543 EISVKYAGYIDRQQEDIDQMKRLENTALPMDFDYSVVSGLSNEIVQKLAQVRPSTLAQAG 602 Query: 597 KIEGMTPAALNLLLIYIKKNT 617 +I G+TPAA+ LL + +KK Sbjct: 603 RISGVTPAAIQLLAMTVKKQK 623 >gi|295108621|emb|CBL22574.1| glucose-inhibited division protein A [Ruminococcus obeum A2-162] Length = 629 Score = 783 bits (2022), Expect = 0.0, Method: Composition-based stats. Identities = 260/624 (41%), Positives = 379/624 (60%), Gaps = 9/624 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + ++ D++V+G GHAGCEAA A+LG T + T +I M CNP +GG KGHLV+E Sbjct: 6 LEKTCDIVVVGAGHAGCEAALAGARLGLDTVMFTVSVDSIALMPCNPNVGGSSKGHLVKE 65 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DAL G MG+ D IQ ++LN KGPAV R QAD++ Y M++ + +QENL + Q Sbjct: 66 LDALGGEMGKNIDKTFIQSKMLNKSKGPAVHSLRAQADKQAYSTEMRKTLENQENLTIKQ 125 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 GEV E I+ + + ++ C VVL TGT+L+ G + G G +N Sbjct: 126 GEVTELLVEDGKITGVKLYSGAIYHCQAVVLCTGTYLKARCIYGDVSNYTGPNGLQAANY 185 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK--ITNRQIE 239 L +S + R KTGTPAR+ G TI + K E+QF DER++PFSF TD + Q Sbjct: 186 LTDSLKSLGIEMFRFKTGTPARIAGNTIDYSKMEEQFGDERVVPFSFSTDPESVQIPQKS 245 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +T TN +TH II N+ S +YSG I+ GPRYCPSIEDK+VRF ++N HQ+F+EPEG Sbjct: 246 CWLTYTNEKTHEIIRNNLDRSPLYSGMIEGTGPRYCPSIEDKVVRFADKNRHQVFIEPEG 305 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T+ +Y G+S++LPE++Q ++PGLE I++ YAIEYD INP++L+PTLE KK Sbjct: 306 LYTNEMYIGGMSSSLPEDVQDAMYHSVPGLEHAKIVKNAYAIEYDCINPRQLYPTLEFKK 365 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF GQ NG++GYEEAAAQGL+AGIN+A + + + R+++YIGV+IDDL +K Sbjct: 366 IKGLFSGGQFNGSSGYEEAAAQGLIAGINAAMEIKGQEQLVLDRSEAYIGVLIDDLVTKE 425 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRM TSRAEYR+ LR DNAD RL G + G I E + + + + Sbjct: 426 NHEPYRMMTSRAEYRLLLRQDNADLRLRKKGYQAGLIDEETYQAVLRKEEAIQKEIDRTE 485 Query: 480 SLVL-----TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIE 534 + K L + + G T E + P+ + ++L I P+ + V + Sbjct: 486 HATIGGTPQVQKLLEEKGSTLLKSGT--TIAELIRRPELNYEDLAPIDPERPELPWDVKQ 543 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I Y Y RQ+ + ++ K E + IP+D DY + +L E ++KL + +P ++ Q Sbjct: 544 QVEINLKYEGYIKRQLKQVEQFKKLEAKKIPEDLDYEKVGSLRIEARQKLELYRPISIGQ 603 Query: 595 ASKIEGMTPAALNLLLIYIKKNTV 618 AS+I G++PA +++LL+Y+++ Sbjct: 604 ASRISGVSPADISVLLVYLEQYRR 627 >gi|53802710|ref|YP_112542.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Methylococcus capsulatus str. Bath] gi|81170556|sp|Q60CS5|MNMG_METCA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|53756471|gb|AAU90762.1| glucose inhibited division protein A [Methylococcus capsulatus str. Bath] Length = 625 Score = 783 bits (2022), Expect = 0.0, Method: Composition-based stats. Identities = 283/619 (45%), Positives = 390/619 (63%), Gaps = 5/619 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +DVIV+GGGHAG EAA AA+ GA T L+T T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 FDDEFDVIVVGGGHAGTEAALAAARTGARTLLLTQNVETLGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDA+ GLM R AD AGIQFR+LN KGPAVR R QADR LYR A++ + +QENL + Q Sbjct: 63 IDAMGGLMARAADRAGIQFRILNASKGPAVRATRAQADRSLYRKAVREGLSAQENLSLFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E + +V Q R VVLT GTFL G IHIG GR GD P+ Sbjct: 123 QTVVDLIVEGRRAAGVVTQMGLKFRSRCVVLTVGTFLAGRIHIGLENYDGGRAGDPPATD 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQIEC 240 L F RLKTGTP R+D +++ + + +Q D+ FSF+ T + Q+ C Sbjct: 183 LARRLRDLGFKVARLKTGTPPRIDRRSVDFSRMAEQPGDDPTPVFSFLGTREEHPPQVSC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 ITRTN TH +I + S +++G I+ GPRYCPSIEDK+VRF ER+ HQIF+EPEGL Sbjct: 243 YITRTNERTHELIRAGLDRSPMFTGVIEGIGPRYCPSIEDKVVRFAERDSHQIFVEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 ++ +YPNGIST+LP ++Q +R+I G E I RPGYAIEYD+ +P++L +LET+ + Sbjct: 303 DSLEIYPNGISTSLPFDVQLAVVRSIQGFEDARITRPGYAIEYDFFDPRDLRHSLETRHM 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 LF AGQINGTTGYEEAAAQGL+AG+N+ARK+ L+ R ++Y+GV++DDL ++G Sbjct: 363 ENLFFAGQINGTTGYEEAAAQGLLAGLNAARKARDLEPWWPGRDEAYLGVLVDDLITRGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT G LG + + R F + L + L + Sbjct: 423 SEPYRMFTSRAEYRLVLREDNADLRLTETGRALGLVDDARWSAFEAKREAIETLGARLAA 482 Query: 481 LVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA-RKFSSLVIERL 536 + + + S ++ + + E L PD ++++ PD V E++ Sbjct: 483 RRIRPDSSQAESWNALTEIPLQREASLLELLRRPDVGLEHIAGHAPDLFEGMDRAVREQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I + Y Y RQ E + ++ E +P DY + LS+E++EKL ++P + QA+ Sbjct: 543 EIAAKYTGYIERQQAEIERVRRYEAWQLPDSMDYGKVIGLSSEVREKLGRVRPATVGQAA 602 Query: 597 KIEGMTPAALNLLLIYIKK 615 +I G+TPAA++LLL+++++ Sbjct: 603 RIPGITPAAISLLLVHLRR 621 >gi|292493915|ref|YP_003529354.1| glucose inhibited division protein A [Nitrosococcus halophilus Nc4] gi|291582510|gb|ADE16967.1| glucose inhibited division protein A [Nitrosococcus halophilus Nc4] Length = 629 Score = 782 bits (2021), Expect = 0.0, Method: Composition-based stats. Identities = 287/618 (46%), Positives = 389/618 (62%), Gaps = 4/618 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 Y+VIV+GGGHAG EAA AA+ GA T L+TH T+G MSCNPAIGG+GKGHLV+EIDA Sbjct: 6 QYEVIVVGGGHAGTEAALAAARQGARTLLLTHNLETLGQMSCNPAIGGIGKGHLVKEIDA 65 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L GLM + AD AGI FRVLN +KGPAVR R QADR LY+ +++ + Q +L + Q V Sbjct: 66 LGGLMAQAADRAGIHFRVLNARKGPAVRATRAQADRALYKAVVRKSLEQQPHLSLFQQAV 125 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 A E + + Q V+LT GTFL G IH+G GR GD P+N+L Sbjct: 126 ADLLVEGERVIGVKTQLGLTFYAPAVILTVGTFLGGRIHVGLTHHEGGRAGDPPANALAC 185 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGIT 243 + F RLKTGTP R+DG++I + + E Q D+ + FSF+ + Q+ C IT Sbjct: 186 RLRELPFRVARLKTGTPPRIDGRSIDYSQLEVQPGDKPVPVFSFLGSAQDHPSQVHCHIT 245 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 RT +TH II N+ S +YSG+I+ GPRYCPSIEDK+VRF ++ HQIF+EPEGL T Sbjct: 246 RTTPQTHEIIHANLDRSPMYSGEIEGMGPRYCPSIEDKVVRFSDKESHQIFIEPEGLETF 305 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNGIST+LP ++Q +R+IPG E+ +I RPGYAIEYD+ +P++L P+LET + GL Sbjct: 306 EVYPNGISTSLPFDVQEALVRSIPGFEQAHITRPGYAIEYDFFDPRDLKPSLETSFLQGL 365 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 + AGQINGTTGYEEA AQGL+AG+N+ + C R ++Y+GV+IDDL + G EP Sbjct: 366 YFAGQINGTTGYEEAGAQGLIAGLNAGLQIRDQAPWCPRRDEAYVGVLIDDLITCGTSEP 425 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAEYR+ LR DNAD RLTP G LG + E R ++F + L + Sbjct: 426 YRMFTSRAEYRLLLREDNADLRLTPKGQALGVVDETRWRQFNAKWEAIERENQRLSQQRI 485 Query: 484 TSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIES 540 + +T++ + + E L P S + L + + +V E++ I++ Sbjct: 486 GPDQVAQEEATTLLGEPLRREYRLIELLRRPQISYEKLMRLIGEPVAVDLVVAEQIAIQA 545 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 YA Y RQ E + E +P D +Y + LS E++EKL+ ++P L QA++I G Sbjct: 546 KYAGYIERQQQEINRQQRHEGLRLPLDLNYHQVKGLSAEVQEKLARVRPATLGQAARIPG 605 Query: 601 MTPAALNLLLIYIKKNTV 618 +TPAA++LLL+Y+K+ V Sbjct: 606 VTPAAVSLLLVYLKRARV 623 >gi|37785809|gb|AAR02616.1| GidA [Aeromonas hydrophila] Length = 629 Score = 782 bits (2021), Expect = 0.0, Method: Composition-based stats. Identities = 278/622 (44%), Positives = 393/622 (63%), Gaps = 5/622 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +DVIV+GGGHAG EAA AA++G +T L+TH T+G MSCNPAIGG+GKGHLV+E Sbjct: 3 YHEQFDVIVVGGGHAGTEAATAAARMGLNTLLLTHNIDTLGHMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DAL G+M R D GIQFR LN KGPAVR R QADR LY+ +++ + + NL + Q Sbjct: 63 VDALGGIMARAIDLGGIQFRTLNSSKGPAVRATRAQADRLLYKAVVRQMLENYPNLKIFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 + + ++ +V Q I TVVLT GTFL G+IHIG GR GD PS + Sbjct: 123 QACDDLIMDGDRVAGVVTQSGIRISGKTVVLTVGTFLNGLIHIGMENYKGGRAGDPPSIA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITN-RQIEC 240 L + RLKTGTP R+D +++ + + Q D+ FSF+ + + RQ+ C Sbjct: 183 LAQRLRELPLRIDRLKTGTPPRIDARSVDFSVMQAQHGDDPRPVFSFIGNASQHPRQVPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 +T TN TH +I N+ S +Y+G I+ GPRYCPSIEDKI RF ++ HQIF+EPEGL Sbjct: 243 YVTHTNERTHEVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKITRFADKTAHQIFVEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T +YPNGIST+LP ++Q Q +R++ G E +I RPGYAIEYD+ +P++L +E+K I Sbjct: 303 TTHELYPNGISTSLPFDVQVQIVRSVRGFENAHITRPGYAIEYDFFDPRDLKANMESKCI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 LF AGQINGTTGYEEAAAQGL+AG+N+A ++ D R +YIGVM+DDL++ G Sbjct: 363 GNLFFAGQINGTTGYEEAAAQGLLAGLNAALRAQGKDPWHPRRDQAYIGVMMDDLSTLGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT IG +LG + + R +F +++ R ++S Sbjct: 423 REPYRMFTSRAEYRLLLREDNADLRLTAIGRELGLVDDERWSKFNAKMEQVEQERQRMRS 482 Query: 481 LVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS-LVIERL 536 + ++ S +++ + ++ E L P+ + L +I S +++ Sbjct: 483 TWIHPQHPSLEAVNALVNTPLTREQSLEELLRRPEVTYDALMAIEGVGPALSDSAAADQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ YA Y RQ E ++ E L+P D +Y + LSNE+ KL+ KP + QAS Sbjct: 543 EIQIKYAGYIERQHDEVEKQLRNENTLLPLDMNYRDVNGLSNEVIAKLNDAKPQTIGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKNTV 618 +I G+TPAA+++LL+++KK+ + Sbjct: 603 RISGITPAAISILLVHLKKHGL 624 >gi|323465553|gb|ADX77706.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Staphylococcus pseudintermedius ED99] Length = 624 Score = 782 bits (2021), Expect = 0.0, Method: Composition-based stats. Identities = 278/624 (44%), Positives = 398/624 (63%), Gaps = 7/624 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +S+DVIV+G GH+G EA +A+ GA T ++T I M CNP++GG KG +VRE Sbjct: 1 MVKSFDVIVVGAGHSGIEAGLASARRGAHTLMLTINLDNIAFMPCNPSVGGPAKGIVVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G M + D IQ R+LN KGPAVR R QAD+ LY+ M+R + ++NL+V+Q Sbjct: 61 IDALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRILEGEDNLEVMQ 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 G V E + + + R V+LTTGTFLRG I +G LK +G PS + Sbjct: 121 GMVDELIIEDGEVKGVRTNIGTEYRAKAVILTTGTFLRGEIILGNLKYSSGPNHQLPSIT 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L + + F+ R KTGTP R++ KTI + KTE Q D+ FS+ T + Q+ C Sbjct: 181 LADHLRELGFEVVRFKTGTPPRVNAKTIDYSKTEIQPGDDVGRAFSYDTTEYILDQLPCW 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN ETH++I +N+ SA+YSG IK GPRYCPSIEDK VRF ++ HQ+FLEPEG N Sbjct: 241 LTYTNGETHQVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRN 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ VY G+ST+LPEE+Q Q + TIPGLEK +++R GYAIEYD + P +L+PTLETK I Sbjct: 301 TNEVYVQGLSTSLPEEVQRQMLATIPGLEKADMMRAGYAIEYDALVPTQLWPTLETKMIK 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 L+ AGQINGT+GYEEAA QGL+AGIN+A + + R+D+YIGV+IDDL +KG Sbjct: 361 NLYTAGQINGTSGYEEAAGQGLMAGINAAARVLGKEETILRRSDAYIGVLIDDLVTKGTN 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYR+ TSRAEYR+ LR DNAD RLT +G +LG I + R +RF Q+ + L+ + Sbjct: 421 EPYRLLTSRAEYRLLLRHDNADLRLTDLGHELGLISDERYERFNTKRQQITDEMARLEQI 480 Query: 482 VLTSKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 + + S +DG A E L P+ + + + I + R+ + V E++ Sbjct: 481 RVKPSERVQQIIEEKGGSRLKDGI--LAKELLRRPEMTYETIIEILEEERQLPADVEEQV 538 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I++ Y Y + + + ++K E++ IP+D DYS + +L+ E +EKL+ +KP N+ QAS Sbjct: 539 EIQTKYEGYITKSLQQVDKVKRMEQKKIPEDLDYSQIDSLATEAREKLAEVKPLNIAQAS 598 Query: 597 KIEGMTPAALNLLLIYIKKNTVKL 620 +I G+ PA +++LL+Y+++ ++ Sbjct: 599 RISGVNPADISILLVYLEQGKIQR 622 >gi|163869378|ref|YP_001610634.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Bartonella tribocorum CIP 105476] gi|189039329|sp|A9IZX9|MNMG_BART1 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|161019081|emb|CAK02639.1| glucose inhibited division protein A [Bartonella tribocorum CIP 105476] Length = 622 Score = 782 bits (2021), Expect = 0.0, Method: Composition-based stats. Identities = 345/619 (55%), Positives = 451/619 (72%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 +SYDVI++GGGHAGCEAA+ +A++GA TAL+THK S +G+MSCNPAIGGLGKGHLVREID Sbjct: 2 QSYDVIIVGGGHAGCEAASASARVGAQTALLTHKISALGTMSCNPAIGGLGKGHLVREID 61 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 ALDGLMGR ADAAGIQFR+LN +KGPAVRGPRTQADR+LY+ A+Q+ + QENL +++ E Sbjct: 62 ALDGLMGRAADAAGIQFRLLNRRKGPAVRGPRTQADRQLYKEAIQKFLKEQENLTLVEDE 121 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + + +S ++++ I VVLTTGTFL G IHIG AGRMGD S L Sbjct: 122 VIDLIVKDHCVSGVILKKQGTIFSGAVVLTTGTFLNGFIHIGDKTWAAGRMGDPASVQLA 181 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGIT 243 + GRLKTGTPARL KTI WD+ KQ ADE +PFSF+T+KI QIEC IT Sbjct: 182 ERLKNYHIKLGRLKTGTPARLSKKTIDWDRLSKQQADENPVPFSFLTEKIEQPQIECAIT 241 Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303 RTN +TH+II +NI SA+YSG+I+ GPRYCPS+EDKIV+FGER+GHQIFLEPEGLN D Sbjct: 242 RTNAQTHQIIRDNIHRSALYSGNIEGLGPRYCPSVEDKIVKFGERDGHQIFLEPEGLNDD 301 Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363 VYPNG+ST+LPE++Q F++TI GLE +++PGYAIEYD++NP++L +LE + + GL Sbjct: 302 TVYPNGLSTSLPEDVQISFLKTIEGLENATVLQPGYAIEYDFVNPQQLTKSLELRSLPGL 361 Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423 FLAGQINGTTGYEEAAAQGL+AG+N+ARK KLD I SR+ +YIGVM+DDL S+GV EP Sbjct: 362 FLAGQINGTTGYEEAAAQGLLAGLNAARKVGKLDEIFISRSTAYIGVMVDDLVSRGVCEP 421 Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483 YRMFTSRAE+R+SLR DNAD RLTP+ + G + + R + K Q + RS+ K+L L Sbjct: 422 YRMFTSRAEFRLSLRSDNADTRLTPLAQEWGIVSKVRWDCYQKKQQRLDQARSICKNLFL 481 Query: 484 TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYA 543 T S+ + DG R+AY+FL+YP +++ L P + S +E L+IE+ YA Sbjct: 482 TPNEASAHGLHVNHDGIRRSAYDFLAYPHMTLERLSHFWPQLQAIDSKTVESLEIEAQYA 541 Query: 544 AYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTP 603 Y +Q + ++ +E+ IP D ++ LSNELK K+ + P ++ A KI+GMTP Sbjct: 542 VYLDKQAQDIASLQRDERLEIPSSLDIQAISGLSNELKSKIQEVSPRSIADAQKIDGMTP 601 Query: 604 AALNLLLIYIKKNTVKLNE 622 AAL+L++ YI++ + + Sbjct: 602 AALSLIITYIQRQRREKAK 620 >gi|304392708|ref|ZP_07374648.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ahrensia sp. R2A130] gi|303295338|gb|EFL89698.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ahrensia sp. R2A130] Length = 625 Score = 782 bits (2020), Expect = 0.0, Method: Composition-based stats. Identities = 343/622 (55%), Positives = 450/622 (72%), Gaps = 3/622 (0%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 +S+DV+VIGGGHAG EAA+ +A++GA TAL+T IG+MSCNPAIGGLGKGHLVREI Sbjct: 4 EKSFDVVVIGGGHAGTEAASASARMGAKTALVTLSADGIGTMSCNPAIGGLGKGHLVREI 63 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DALDGLMGRVADA+GIQFR+LN +KGPAVRGPRTQ+DR+LY++AM E SQ NL +I+G Sbjct: 64 DALDGLMGRVADASGIQFRMLNRRKGPAVRGPRTQSDRKLYKIAMADETASQNNLAIIEG 123 Query: 123 EVAGF-NTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 EV +S + + D + IRC VVLTTGTFL G+IHIG+ +PAGRMG+ PS + Sbjct: 124 EVIDIVPYSDGRVSGVQLADGTFIRCGAVVLTTGTFLNGLIHIGEKTVPAGRMGEKPSIA 183 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L N + GRLKTGTPARLDG+TI W E Q AD+ +PFS +TD+I Q+ CG Sbjct: 184 LANRLRSLELPLGRLKTGTPARLDGRTIDWASLEMQEADDPPVPFSTLTDRIIVPQVACG 243 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 ITRT TH II +N+ SA+YSG I GPRYCPS+EDKIV+FGER+GHQIFLEPEGL+ Sbjct: 244 ITRTTPATHAIIRDNVHRSAMYSGQIGGVGPRYCPSVEDKIVKFGERDGHQIFLEPEGLD 303 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 VYPNGIST+LPEE+Q +FI TIPGLE+ I++PGYAIEYDY++P+ L P+LE + + Sbjct: 304 DHTVYPNGISTSLPEEVQSEFIATIPGLEQAKILQPGYAIEYDYVDPRALRPSLEIRAMQ 363 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GL+LAGQINGTTGYEEA AQGLVAG+N+AR+ ++ + FSR++SYIGVM+DDL ++GV Sbjct: 364 GLYLAGQINGTTGYEEAGAQGLVAGLNAARQVAGMEPVHFSRSESYIGVMLDDLVTRGVS 423 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+SLR DNAD RLTP ++LG RQ F + E + R+L S+ Sbjct: 424 EPYRMFTSRAEYRLSLRADNADQRLTPKAIELGICSATRQATFTSKLTELDAARNLCGSV 483 Query: 482 VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 LT ++ + QDG R A + L+Y + S++ L +I P+ + E+++IE+ Sbjct: 484 SLTPSEATAHGLKITQDGVRRDATDLLAYSEVSMEILSNIWPELASLDPAIAEQVEIEAG 543 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ + + +E IP FD++++ +SNE + KL ++P ++ QAS+I+GM Sbjct: 544 YAVYMARQKRDIDAVLRDEALSIPDQFDFAAIGGMSNEARSKLVSVRPSSIGQASRIDGM 603 Query: 602 TPAALNLLLIYIKK--NTVKLN 621 TPAA LLL +++ K++ Sbjct: 604 TPAATTLLLAAVRRFEQARKVS 625 >gi|254369131|ref|ZP_04985143.1| glucose-inhibited division protein A [Francisella tularensis subsp. holarctica FSC022] gi|157122081|gb|EDO66221.1| glucose-inhibited division protein A [Francisella tularensis subsp. holarctica FSC022] Length = 627 Score = 782 bits (2020), Expect = 0.0, Method: Composition-based stats. Identities = 303/621 (48%), Positives = 399/621 (64%), Gaps = 6/621 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + YDVIV+GGGHAG EAA+ +A++GA T L+TH TIG MSCNPAIGG+GKGHLV+ Sbjct: 2 IYDYGYDVIVVGGGHAGVEAASASARIGAKTLLLTHNIDTIGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDA+ G+M + D AGIQFR+LN +KGPAVR R QADR LY+ A+ I +QENLD+ Sbjct: 62 EIDAMGGVMAKAIDMAGIQFRILNSRKGPAVRATRAQADRVLYKKAINSLINNQENLDIF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E N + + + R VVLT GTFL G IHIGK+ GR GD PSN Sbjct: 122 QDSVDDLVVENNTVCGAITKTGITFRAKKVVLTVGTFLGGKIHIGKVSNAGGRAGDQPSN 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI--TNRQI 238 +L F RLKTGTP R+D +++ + E Q D FSF + RQI Sbjct: 182 ALAARLRSLPFRVDRLKTGTPPRIDRRSVDFSVMEVQHGDNPTPYFSFFSKGKIEHPRQI 241 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C IT TN ETH+II +N+ SA+YSG I+ GPRYCPSIEDK+VRF ++ HQIF+EPE Sbjct: 242 PCYITYTNNETHKIITDNLDKSAMYSGLIEGIGPRYCPSIEDKVVRFADKERHQIFVEPE 301 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GLN+ +YPNG+ST+LP E+Q +IR+I G EK I+RPGYAIEYD+ +P++L PTLETK Sbjct: 302 GLNSIELYPNGLSTSLPFEVQCNYIRSIKGFEKAFIMRPGYAIEYDFFDPRDLKPTLETK 361 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I L+ AGQINGTTGYEEA AQGLVA IN+A + +R DSYIGV+IDDL +K Sbjct: 362 HIKNLYFAGQINGTTGYEEAGAQGLVASINAAISIDSDKSWYPTRADSYIGVLIDDLITK 421 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYRMFTSRAEYR+ LR DNAD RL+ +LG + + Q+ F S++ Sbjct: 422 GTKEPYRMFTSRAEYRLILREDNADLRLSDKACELGLLSKEDQQHFISKKNAIIENISMM 481 Query: 479 KSLVLTSKNLSSTSISF---KQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIE 534 K+ + + + + K+ + T ++ L P+ L I VIE Sbjct: 482 KNTWIGPQTQKARDLEKFLDKKMTRESTLFDLLKRPEIDYSKLQQISELNLNLQDDAVIE 541 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I + Y+ Y RQ + ++ E++ IP DF+YS + LSNE+ +KL+ KP L + Sbjct: 542 QIEISAKYSGYIERQNKDIEKTATLEQKAIPTDFNYSQVKGLSNEVLQKLTEQKPTTLGE 601 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G+TPAA++LL IY+KK Sbjct: 602 ASRIPGITPAAISLLTIYMKK 622 >gi|329894823|ref|ZP_08270623.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [gamma proteobacterium IMCC3088] gi|328922717|gb|EGG30051.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [gamma proteobacterium IMCC3088] Length = 630 Score = 782 bits (2020), Expect = 0.0, Method: Composition-based stats. Identities = 290/618 (46%), Positives = 392/618 (63%), Gaps = 5/618 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 +++DVIVIGGGHAG EAA +A++G +T LITH T+G MSCNPAIGG+GK HLVREID Sbjct: 5 QTFDVIVIGGGHAGTEAALASARMGCATLLITHSVDTLGQMSCNPAIGGIGKSHLVREID 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D AGIQFRVLN +KGPAVR R QADR LY+ A+++ + Q NL + Q Sbjct: 65 ALGGAMAEATDEAGIQFRVLNSRKGPAVRATRAQADRVLYKAAIRKRLEQQSNLWIFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + + + ++ Q + VVLT GTFL G IHIG + GR GD + +L Sbjct: 125 VDDLIIKGDRVEGVITQMGLRFKAPAVVLTAGTFLAGKIHIGLEQSQGGRAGDPAAMTLA 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGI 242 + RLKTGTP R+D +T+ + ++Q+ D S M T+ Q+ C I Sbjct: 185 ARLRDLNLRVDRLKTGTPPRIDARTVDFSVMQEQWGDTPEPVMSLMGSAATHPKQMCCWI 244 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II +N+ S ++SG I+ GPRYCPSIEDKI RF +++ HQ+F+EPEGL T Sbjct: 245 THTNAQTHEIISQNLDRSPLFSGVIEGTGPRYCPSIEDKIHRFADKDSHQVFVEPEGLTT 304 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + +YPNGIST+LP ++Q+ +R+I G E +I+RPGYAIEYD+ +P+ L TLETK I G Sbjct: 305 NELYPNGISTSLPFDVQYAVVRSIKGFENAHIVRPGYAIEYDFFDPRGLKHTLETKAIDG 364 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEA AQGL+AG+N+ + +R ++YIGVMIDDL + G E Sbjct: 365 LFFAGQINGTTGYEEAGAQGLIAGLNAGLRVKGKPAWYPTRKEAYIGVMIDDLVTHGTAE 424 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT IG +LG + + R + ++ +++ L S Sbjct: 425 PYRMFTSRAEYRLMLREDNADQRLTAIGRQLGLVNDLRWQDYSTKMEQLAAEHERLASTY 484 Query: 483 L---TSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + T + IS K + + + L P+ ++ + A + V ++++IE Sbjct: 485 IQAKTPQAEKVEQISGKPLTREYSLLDLLKRPELHYHDIADLKGAACE-RLDVAQQVEIE 543 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 S YA Y RQ E + + + + IP DFDY S+ LSNEL+ KL + P L QA +I Sbjct: 544 SKYAGYIARQEQEIQRMAGQAETQIPSDFDYQSVSGLSNELRSKLEDVNPLTLDQAGRIA 603 Query: 600 GMTPAALNLLLIYIKKNT 617 GMTPAAL+LL IY+KK+ Sbjct: 604 GMTPAALSLLAIYLKKHR 621 >gi|227823855|ref|YP_002827828.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Sinorhizobium fredii NGR234] gi|227342857|gb|ACP27075.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Sinorhizobium fredii NGR234] Length = 627 Score = 782 bits (2020), Expect = 0.0, Method: Composition-based stats. Identities = 383/614 (62%), Positives = 473/614 (77%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 SYDVIVIGGGHAGCEAA+ AA+LGA TALITHK TIG MSCNPAIGGLGKGHLVREIDA Sbjct: 3 SYDVIVIGGGHAGCEAASAAARLGARTALITHKKETIGVMSCNPAIGGLGKGHLVREIDA 62 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRVADAAGIQFR+LN +KGPAVRGPRTQADR LYR AMQREI + ENL VI+G+ Sbjct: 63 LDGLMGRVADAAGIQFRLLNRRKGPAVRGPRTQADRRLYREAMQREIDAIENLLVIEGDA 122 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 TE ++ ++M++ + R + VVLTTGTFL+G+IHIG KIPAGR+G+ PS L Sbjct: 123 FDLLTEGETVAGVIMKNGQVFRAAAVVLTTGTFLKGLIHIGDRKIPAGRVGEEPSVGLSE 182 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + +F GRLKTGTPARLDG+TI WD+ +Q DE +PFSFMTD I NRQI+CG+TR Sbjct: 183 TLARFGLKLGRLKTGTPARLDGRTIHWDRVGRQGPDEEPVPFSFMTDTIVNRQIDCGVTR 242 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T TH++I +NI SA+YSG I+ GPRYCPSIEDKIVRFGER+GHQIFLEPEGL+ D Sbjct: 243 TTDATHKLIADNIHRSAMYSGQIEGVGPRYCPSIEDKIVRFGERDGHQIFLEPEGLDDDT 302 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LPEE+Q FIRT+PGLE V+I++PGYAIEYD+++P+EL +L +K GL+ Sbjct: 303 IYPNGISTSLPEEVQEAFIRTVPGLESVSILQPGYAIEYDHVDPRELQLSLAVRKSPGLY 362 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEA AQGLVAG+N+A + + FSRTDSYIGVMIDDLTS+G+ EPY Sbjct: 363 LAGQINGTTGYEEAGAQGLVAGLNAALAAMGREPFVFSRTDSYIGVMIDDLTSRGITEPY 422 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+SLR DNAD RLTP G++LGC+GE R+ RF + + Y+ +LLKSL +T Sbjct: 423 RMFTSRAEYRLSLRADNADMRLTPTGIELGCVGEARRTRFGSWKRAYDDGHTLLKSLSIT 482 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + + +DG+ RTA++ L+YPD +I+ L + P V E LQI+++YA Sbjct: 483 PNEGARYGLKLNRDGQRRTAFDLLAYPDQTIEGLRPLWPQLDAIDPRVSEALQIDAAYAV 542 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + I+ EE IP DFDYS LP LSNELK+KL+ +P NL QA K++GMTPA Sbjct: 543 YMERQAADIAGIRREESAAIPDDFDYSVLPGLSNELKQKLAQQRPRNLAQAMKVDGMTPA 602 Query: 605 ALNLLLIYIKKNTV 618 A++LLL ++++ Sbjct: 603 AVSLLLSWLRRQER 616 >gi|326797439|ref|YP_004315259.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Marinomonas mediterranea MMB-1] gi|326548203|gb|ADZ93423.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Marinomonas mediterranea MMB-1] Length = 629 Score = 782 bits (2019), Expect = 0.0, Method: Composition-based stats. Identities = 289/619 (46%), Positives = 390/619 (63%), Gaps = 7/619 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA+ GA T L++H T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FDVIVVGGGHAGTEAALAAARTGAKTLLLSHNIETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 DG M D GIQFR LN +KGPAVR R QADR LY+ A+++++ +QENL + Q Sbjct: 67 DGAMALATDQGGIQFRTLNSRKGPAVRATRAQADRILYKAAIRQQLENQENLWLFQQSCE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E+ +V Q TVVLT GTFL G+IH+G GR GD PS L Sbjct: 127 DLIVEEGAARGMVTQTGIRFLSKTVVLTAGTFLGGIIHVGLQNHSGGRAGDPPSIGLAEK 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGITR 244 F RLKTGTP R+D +++ + + Q D+ S+M + + RQI C IT Sbjct: 187 LRALPFRVDRLKTGTPPRIDARSVDFSVMQAQPGDDVTPVMSYMGNSAMHPRQINCFITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH II + S +Y+G I+ GPRYCPSIEDKIVRF ++N HQIF+EPEGL T Sbjct: 247 TNEQTHDIIRSGMDRSPMYTGVIEGVGPRYCPSIEDKIVRFADKNSHQIFIEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q + +R++ GLE +I RPGYAIEYDY NP++L +LETK + GLF Sbjct: 307 LYPNGISTSLPFDVQLELVRSMKGLENAHITRPGYAIEYDYFNPQDLKYSLETKHMPGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG+N+A +S D R ++Y+GV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGLNAALQSQDKDAWTPRRDEAYLGVLVDDLITMGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG + + R F + + +KS + Sbjct: 427 RMFTSRAEYRLVLREDNADMRLTEKGRELGVVSDERWAAFCEKRESIERETQRMKSSWIV 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSI--CPDARKFSSLVIERLQIE 539 S +I+ K + + L P ++ ++ P+ K V E++QI Sbjct: 487 PNTPESEAINPKLETPISREYNLLDLLKRPGIEYSDVANLKNAPE-EKIDIRVAEQVQIS 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ + + ++ +E +P+D DYS + LSNE+K+KL KP L AS+I+ Sbjct: 546 VKYEGYISRQADDIERLRRQENTALPEDLDYSGIDGLSNEVKQKLIDAKPQTLAAASRIQ 605 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+TPAA++LLL+++KK ++ Sbjct: 606 GITPAAISLLLVHLKKRSI 624 >gi|89256126|ref|YP_513488.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Francisella tularensis subsp. holarctica LVS] gi|115314600|ref|YP_763323.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Francisella tularensis subsp. holarctica OSU18] gi|156502147|ref|YP_001428212.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Francisella tularensis subsp. holarctica FTNF002-00] gi|167009829|ref|ZP_02274760.1| glucose-inhibited division protein A [Francisella tularensis subsp. holarctica FSC200] gi|187931542|ref|YP_001891526.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Francisella tularensis subsp. mediasiatica FSC147] gi|254367451|ref|ZP_04983477.1| glucose inhibited division protein A [Francisella tularensis subsp. holarctica 257] gi|122325376|sp|Q0BMJ8|MNMG_FRATO RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|122500919|sp|Q2A464|MNMG_FRATH RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|166222933|sp|A7NBA3|MNMG_FRATF RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|89143957|emb|CAJ79178.1| glucose inhibited division protein A [Francisella tularensis subsp. holarctica LVS] gi|115129499|gb|ABI82686.1| glucose inhibited division protein A [Francisella tularensis subsp. holarctica OSU18] gi|134253267|gb|EBA52361.1| glucose inhibited division protein A [Francisella tularensis subsp. holarctica 257] gi|156252750|gb|ABU61256.1| glucose-inhibited division protein A [Francisella tularensis subsp. holarctica FTNF002-00] gi|187712451|gb|ACD30748.1| glucose inhibited division protein [Francisella tularensis subsp. mediasiatica FSC147] Length = 627 Score = 782 bits (2019), Expect = 0.0, Method: Composition-based stats. Identities = 302/621 (48%), Positives = 399/621 (64%), Gaps = 6/621 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + YDVIV+GGGHAG EAA+ +A++GA T L+TH TIG MSCNPAIGG+GKGHLV+ Sbjct: 2 IYDYGYDVIVVGGGHAGVEAASASARIGAKTLLLTHNIDTIGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDA+ G+M + D AGIQFR+LN +KGPAVR R QADR LY+ A+ I +QENLD+ Sbjct: 62 EIDAMGGVMAKAIDMAGIQFRILNSRKGPAVRATRAQADRVLYKKAINSLINNQENLDIF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E N + + + R VVLT GTFL G IHIGK+ GR GD PSN Sbjct: 122 QDSVDDLVVENNTVCGAITKTGITFRAKKVVLTVGTFLGGKIHIGKVSNAGGRAGDQPSN 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI--TNRQI 238 +L F RLKTGTP R+D +++ + E Q D FSF + RQI Sbjct: 182 ALAARLRSLPFRVDRLKTGTPPRIDRRSVDFSVMEVQHGDNPTPYFSFFSKGKIEHPRQI 241 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C IT TN ETH+II +N+ SA+YSG I+ GPRYCPSIEDK+VRF ++ HQIF+EPE Sbjct: 242 PCYITYTNNETHKIITDNLDKSAMYSGLIEGIGPRYCPSIEDKVVRFADKERHQIFVEPE 301 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GLN+ +YPNG+ST+LP E+Q +IR+I G EK I+RPGYAIEYD+ +P++L PTLETK Sbjct: 302 GLNSIELYPNGLSTSLPFEVQCNYIRSIKGFEKAFIMRPGYAIEYDFFDPRDLKPTLETK 361 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I L+ AGQINGTTGYEEA AQGLVA IN+A + +R DSYIGV+IDDL +K Sbjct: 362 HIKNLYFAGQINGTTGYEEAGAQGLVASINAAISIDSDKSWYPTRADSYIGVLIDDLITK 421 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYRMFTSRAEYR+ LR DNAD RL+ +LG + + Q+ F +++ Sbjct: 422 GTKEPYRMFTSRAEYRLILREDNADLRLSDKACELGLLSKEDQQHFISKKNAIIENIAMM 481 Query: 479 KSLVLTSKNLSSTSISF---KQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIE 534 K+ + + + + K+ + T ++ L P+ L I VIE Sbjct: 482 KNTWIGPQTQKARDLEKFLDKKMTRESTLFDLLKRPEIDYSKLQQISELNLNLQDDAVIE 541 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I + Y+ Y RQ + ++ E++ IP DF+YS + LSNE+ +KL+ KP L + Sbjct: 542 QIEISAKYSGYIERQNKDIEKTATLEQKAIPTDFNYSQVKGLSNEVLQKLTEQKPTTLGE 601 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G+TPAA++LL IY+KK Sbjct: 602 ASRIPGITPAAISLLTIYMKK 622 >gi|331092105|ref|ZP_08340936.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Lachnospiraceae bacterium 2_1_46FAA] gi|330402306|gb|EGG81877.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Lachnospiraceae bacterium 2_1_46FAA] Length = 632 Score = 782 bits (2019), Expect = 0.0, Method: Composition-based stats. Identities = 264/616 (42%), Positives = 376/616 (61%), Gaps = 5/616 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDV+VIG GHAGCEA A+LG T + T +++ M CNP IGG KGHLVREIDA Sbjct: 14 EYDVVVIGAGHAGCEAGLATARLGLKTIVFTVSINSVALMPCNPNIGGTSKGHLVREIDA 73 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+V D IQ ++LN KGPAV R QAD+ Y M+ + +QENL++ Q EV Sbjct: 74 LGGEMGKVIDKTFIQSKMLNKSKGPAVHSLRAQADKAQYSKTMRCVLENQENLELKQAEV 133 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E I+ + ++ C V+L TGT+L+ G++ G G +N L + Sbjct: 134 TDILVEDGKITGVQTYSGAVYHCKAVILCTGTYLKSRCIYGEISNETGPDGLQAANYLTD 193 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECGI 242 S + + R KTGTPAR+D +I + K E+QF DER++PFSF T + + Q C + Sbjct: 194 SLKRLGIEMYRFKTGTPARIDKNSIDFSKMEEQFGDERVVPFSFTTNPEDVQIEQASCWL 253 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH II +N+ S ++SG I+ GPRYCPSIEDK+V+F ++N HQ+F+EPEGL+T Sbjct: 254 TYTNEKTHEIIRQNLDRSPLFSGMIEGTGPRYCPSIEDKVVKFADKNRHQVFIEPEGLDT 313 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + +Y G+S++LPE++Q++ R++PGLE I+R YAIEYD I+ ++L+PTLE KKI G Sbjct: 314 NEMYIGGMSSSLPEDVQYEMYRSVPGLENARIMRNAYAIEYDCIDARQLYPTLEFKKIEG 373 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ GQ NG++GYEEAAAQGL+AGIN+A K + I R++ YIGV+IDDL +K E Sbjct: 374 LYSGGQFNGSSGYEEAAAQGLIAGINAALKLLGREQIVIDRSEGYIGVLIDDLVTKESHE 433 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRM TSRAEYR+ LR DNAD RLT IG K+G I R + ++ +K Sbjct: 434 PYRMMTSRAEYRLLLRQDNADQRLTEIGYKVGLISNDRYSHLKEKERQIEQEVERVKHTN 493 Query: 483 LTSKNLSSTSI---SFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 + + + T E + P+ + + L I K S VIE++ I Sbjct: 494 IGANGKVQEVLEKYGSTPLNSGTTLAELIRRPELNYEALAPIDVKREKLSDEVIEQVNIS 553 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQM + ++ K E + IP + DY + +L E +KL +P ++ QAS+I Sbjct: 554 IKYEGYITRQMKQVEQFKKLETKRIPDEIDYDDVKSLRIEAVQKLKQYRPISIGQASRIS 613 Query: 600 GMTPAALNLLLIYIKK 615 G++PA +++LL+Y+++ Sbjct: 614 GVSPADISVLLVYMEQ 629 >gi|220930843|ref|YP_002507752.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium cellulolyticum H10] gi|220001171|gb|ACL77772.1| glucose inhibited division protein A [Clostridium cellulolyticum H10] Length = 627 Score = 782 bits (2019), Expect = 0.0, Method: Composition-based stats. Identities = 280/622 (45%), Positives = 395/622 (63%), Gaps = 6/622 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YD++V+GGGHAGCEAA AA+LG ST + + +I +M CNP+IGG KGHLVREIDA Sbjct: 7 NYDIVVVGGGHAGCEAALAAARLGCSTIIFSINLDSIANMPCNPSIGGTAKGHLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+ D IQ ++LN KGPAV R Q DR Y++ M+ + QENLD+ Q EV Sbjct: 67 LGGQMGKATDKTFIQSKILNSSKGPAVYSLRAQVDRRQYQMEMKNILEKQENLDIRQSEV 126 Query: 125 AGFNTE--KNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 T+ K ++ + ++ C VVLTTGT+L+G I IG + G G P+N L Sbjct: 127 VEILTDENKTKVTGVKTHTGAIFHCKAVVLTTGTYLKGRIFIGDVNYSGGPDGLFPANKL 186 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGI 242 S + R KTGTPARL+ +++ + K +Q D+ ++PFSF T+KI Q+ C + Sbjct: 187 SESLQNLGLNLIRFKTGTPARLNRQSLNFSKMSEQPGDDVIVPFSFETEKIDKEQVSCWL 246 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN ETH +I NI S +YSG+I GPRYCPSIEDK+VRF ++ HQ+F+EP GL T Sbjct: 247 TYTNQETHEVIKRNIHKSPLYSGNITGVGPRYCPSIEDKVVRFSDKEHHQVFVEPMGLET 306 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + +Y G+S++LPE++Q +F+RTIPGLE V ++R YAIEYD I+ +L +LE K ++G Sbjct: 307 EEMYLQGMSSSLPEDVQIEFMRTIPGLENVKVMRSAYAIEYDGIDATQLKLSLEYKDVAG 366 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQING++GYEEAAAQG+VAGIN+ K + + F R+ +YIGV+IDDL +KG E Sbjct: 367 LFSAGQINGSSGYEEAAAQGIVAGINAVMKIKNREPLVFDRSQAYIGVLIDDLVTKGTKE 426 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRM TSRAEYR+ LR DNAD RLTPIG ++G I E R KRF + + LK Sbjct: 427 PYRMMTSRAEYRLLLRQDNADLRLTPIGREIGLISEERYKRFLEKKEMIEKEIERLKKTY 486 Query: 483 LTSKNLSSTSISFKQDGKTRTAYE---FLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 L + + + ++ + L P+ S ++L IC + V E++++ Sbjct: 487 LPPSEKVQSYLENRNSTAIKSGIQVTELLRRPEISYESLSEIC-ELPDLPRAVREQVEVA 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQM + ++ K E R +P D DY+ + L E ++KLS +KP ++ QAS+I Sbjct: 546 VKYEGYIKRQMQQVEQYKKLEGRKLPHDIDYNEIQGLRLEARQKLSQIKPDSIGQASRIT 605 Query: 600 GMTPAALNLLLIYIKKNTVKLN 621 G++PA +++LLIY+++ K + Sbjct: 606 GVSPADISVLLIYLEQVKRKRD 627 >gi|253581094|ref|ZP_04858354.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251847630|gb|EES75600.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 634 Score = 781 bits (2018), Expect = 0.0, Method: Composition-based stats. Identities = 257/615 (41%), Positives = 371/615 (60%), Gaps = 5/615 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 YD++V+G GHAGCEAA A+LG +T + T +I M CNP +GG KGHLVRE+D Sbjct: 16 EDYDIVVVGAGHAGCEAALAGARLGLNTVMFTVSVDSIALMPCNPNVGGSSKGHLVRELD 75 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G MG+ D IQ ++LN KGPAV R QAD++ Y M++ + + NL + QGE Sbjct: 76 ALGGEMGKNIDKTFIQSKMLNCSKGPAVHSLRAQADKQAYSNEMRKTLENTPNLTIKQGE 135 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E I+ + + C VVL TGT+L+ G + G G +N L Sbjct: 136 VTKLLVEDGKITGVKTYSGATYNCKAVVLCTGTYLKARCIYGDVSNYTGPNGLQAANYLT 195 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIECG 241 +S + + R KTGTPAR+ G TI + K E+QF DER++PFSF T + + Q C Sbjct: 196 DSLKELGIEMFRFKTGTPARIAGNTIDYSKMEEQFGDERVVPFSFSTNPEDVQIEQKSCW 255 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T TN +TH II N+ S +YSG I+ GPRYCPSIEDK+VRF ++N HQ+F+EPEGL Sbjct: 256 LTYTNEKTHEIIRANLDRSPLYSGMIEGTGPRYCPSIEDKVVRFADKNRHQVFIEPEGLY 315 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T+ +Y G+S++LPE++Q + ++PGLE I++ YAIEYD INP++L+PTLE KKI Sbjct: 316 TNEMYIGGMSSSLPEDVQEEMYHSVPGLEHAKIVKNAYAIEYDCINPRQLYPTLEFKKIK 375 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF GQ NG++GYEEAAAQGL+AGIN+A + + + R+++YIGV+IDDL +K Sbjct: 376 GLFSGGQFNGSSGYEEAAAQGLIAGINAALEVKGQEQLILDRSEAYIGVLIDDLVTKENH 435 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRM TSRAEYR+ LR DNAD RL G + G I E ++ ++ S ++ Sbjct: 436 EPYRMMTSRAEYRLLLRQDNADLRLRKKGYQAGLISEEDYQKILTKEEQIKTEISRVEHT 495 Query: 482 VLTSKNLSSTSI---SFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538 + + T + + T E + P+ S + + + + + V E++ I Sbjct: 496 NIGANKEVQTLLESYNSTPLKSGTTLAELIRRPELSYEAIKPLDKERPELPWDVQEQVDI 555 Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598 Y Y RQ+ + ++ K E + IP D DY + +L E ++KL +P ++ QAS+I Sbjct: 556 NIKYDGYIRRQLKQVEQFKKLEAKKIPTDLDYEKVGSLRIEARQKLEAYRPISIGQASRI 615 Query: 599 EGMTPAALNLLLIYI 613 G++PA +++LL+Y+ Sbjct: 616 SGVSPADISVLLVYL 630 >gi|118497772|ref|YP_898822.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Francisella tularensis subsp. novicida U112] gi|194323744|ref|ZP_03057520.1| glucose-inhibited division protein A [Francisella tularensis subsp. novicida FTE] gi|208779835|ref|ZP_03247179.1| glucose-inhibited division protein A [Francisella novicida FTG] gi|166222934|sp|A0Q753|MNMG_FRATN RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|118423678|gb|ABK90068.1| glucose inhibited division protein A [Francisella novicida U112] gi|194322108|gb|EDX19590.1| glucose-inhibited division protein A [Francisella tularensis subsp. novicida FTE] gi|208744290|gb|EDZ90590.1| glucose-inhibited division protein A [Francisella novicida FTG] Length = 627 Score = 781 bits (2018), Expect = 0.0, Method: Composition-based stats. Identities = 303/621 (48%), Positives = 400/621 (64%), Gaps = 6/621 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + YDVIV+GGGHAG EAA+ +A++GA T L+TH TIG MSCNPAIGG+GKGHLV+ Sbjct: 2 IYDYGYDVIVVGGGHAGVEAASASARIGAKTLLLTHNIDTIGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDA+ G+M + D AGIQFR+LN +KGPAVR R QADR LY+ A+ I +QENLD+ Sbjct: 62 EIDAMGGVMAKAIDMAGIQFRILNSRKGPAVRATRAQADRVLYKKAINSLINNQENLDIF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E N + + + R VVLT GTFL G IHIGK+ GR GD PSN Sbjct: 122 QDSVDDLVVENNTVCGAITKTGITFRAKKVVLTVGTFLGGKIHIGKVSNAGGRAGDQPSN 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI--TNRQI 238 +L F RLKTGTP R+D +++ + E Q D FSF + RQI Sbjct: 182 ALAARLRSLPFRVDRLKTGTPPRIDRRSVDFSVMEVQHGDNPTPYFSFFSKGKIEHPRQI 241 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C IT TN ETH+II +N+ SA+YSG I+ GPRYCPSIEDK+VRF ++ HQIF+EPE Sbjct: 242 PCYITYTNNETHKIITDNLDKSAMYSGLIEGIGPRYCPSIEDKVVRFADKERHQIFVEPE 301 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GLN+ +YPNG+ST+LP E+Q +IR+I G EK I+RPGYAIEYD+ +P++L PTLETK Sbjct: 302 GLNSIELYPNGLSTSLPFEVQCNYIRSIKGFEKAFIMRPGYAIEYDFFDPRDLKPTLETK 361 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I L+ AGQINGTTGYEEA AQGLVAGIN+A + +R DSYIGV+IDDL +K Sbjct: 362 HIKNLYFAGQINGTTGYEEAGAQGLVAGINAAISIDSDKSWYPTRADSYIGVLIDDLITK 421 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYRMFTSRAEYR+ LR DNAD RL+ +LG + + Q+ F +++ Sbjct: 422 GTKEPYRMFTSRAEYRLILREDNADLRLSDKACELGLLSKEDQQHFISKKNAIIENIAMM 481 Query: 479 KSLVLTSKNLSSTSISF---KQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIE 534 K+ + + + + K+ + T ++ L P+ L I VIE Sbjct: 482 KNTWIGPQTQKARDLEKFLDKKMTRESTLFDLLKRPEIDYSKLQQISELNLNLQDEAVIE 541 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I + Y+ Y RQ + ++ E++ IP DF+YS + LSNE+ +KL+ KP L + Sbjct: 542 QIEISAKYSGYIERQNKDIEKTATLEQKAIPTDFNYSQVKGLSNEVLQKLTEQKPTTLGE 601 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G+TPAA++LL IY+KK Sbjct: 602 ASRIPGITPAAISLLTIYMKK 622 >gi|134301152|ref|YP_001114648.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Desulfotomaculum reducens MI-1] gi|172044353|sp|A4J9S0|MNMG_DESRM RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|134053852|gb|ABO51823.1| glucose inhibited division protein A [Desulfotomaculum reducens MI-1] Length = 630 Score = 781 bits (2018), Expect = 0.0, Method: Composition-based stats. Identities = 268/619 (43%), Positives = 379/619 (61%), Gaps = 3/619 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDVI++G GHAGCEA AA++G T ++T I M CNPA+GG K HLV+EIDA Sbjct: 7 DYDVIIVGAGHAGCEAGLAAARMGCKTLVLTLNLDNIALMPCNPAVGGPAKSHLVKEIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG D A IQ R+LN KGPAV R QAD+ Y+ M++ + +QENLDV Q V Sbjct: 67 LGGQMGLTTDLAAIQMRMLNTGKGPAVYALRAQADKVKYQQLMKKNLETQENLDVKQLLV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + ++ + Q + VV+TTGT+L+G I IG + P G PS +L Sbjct: 127 EEILVKNGRVTGVATQIGAEFSARAVVVTTGTYLKGRIIIGNVHFPGGPNSQFPSVNLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + + GR KTGTPAR+D +TI + K Q DE + FS+++ Q+ C +T Sbjct: 187 NLRSLGLELGRFKTGTPARVDRRTIDFTKMTIQPGDEEVHNFSYISPVTQREQVPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T +TH II EN+ S +YSG I+ GPRYCPSIEDKIVRF ++ HQIF+EPEGL+T Sbjct: 247 TTEKTHEIIRENLHRSPLYSGIIEGVGPRYCPSIEDKIVRFADKPQHQIFVEPEGLHTYE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+ST+LP ++Q + RTIPG+E V+I+RP YAIEYDYI P +L TLETK+I GL+ Sbjct: 307 MYVQGMSTSLPPDVQLKMYRTIPGMENVSIMRPAYAIEYDYIVPTQLRTTLETKEIIGLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAAAQG++AGIN+A + + D SR+++YIGV+IDDL KG EPY Sbjct: 367 AAGQINGTSGYEEAAAQGIMAGINAALQVQEKDPFYLSRSEAYIGVLIDDLVVKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ T+RAEYR+ LR DNAD+RLT G +G + + R + Q + LK++V+ Sbjct: 427 RLMTARAEYRLLLRQDNADHRLTQKGYNIGLVSQVRYDHYMNKWQSISKEMERLKTIVIP 486 Query: 485 SKNLSS---TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 + ++ S+ + + L P+ L + VIE ++IE Sbjct: 487 ANEETNKVLKSLESSEITQNTPFINLLRRPEIKYNTLAGLSDHFLDLPQEVIEEVEIEVK 546 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y +Q+ + + + E R++ D DY + LS E ++KL KP ++ QAS+I G+ Sbjct: 547 YEGYIKKQLAQVERFEKLEGRILNIDIDYEMIKGLSLEARQKLKKFKPTSIGQASRISGV 606 Query: 602 TPAALNLLLIYIKKNTVKL 620 +PA +++LLI++++ K+ Sbjct: 607 SPADISVLLIWLEQERRKI 625 >gi|134302185|ref|YP_001122154.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Francisella tularensis subsp. tularensis WY96-3418] gi|166222935|sp|A4IYN2|MNMG_FRATW RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|134049962|gb|ABO47033.1| glucose-inhibited division protein A [Francisella tularensis subsp. tularensis WY96-3418] Length = 627 Score = 781 bits (2018), Expect = 0.0, Method: Composition-based stats. Identities = 302/621 (48%), Positives = 399/621 (64%), Gaps = 6/621 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + YDVIV+GGGHAG EAA+ +A++GA T L+TH TIG MSCNPAIGG+GKGHLV+ Sbjct: 2 IYDYGYDVIVVGGGHAGVEAASASARIGAKTLLLTHNIDTIGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDA+ G+M + D AGIQFR+LN +KGPAVR R QADR LY+ A+ I +QENLD+ Sbjct: 62 EIDAMGGVMAKAIDMAGIQFRILNSRKGPAVRATRAQADRLLYKKAINSLINNQENLDIF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E N + + + R VVLT GTFL G IHIGK+ GR GD PSN Sbjct: 122 QDSVDDLVVENNTVCGAITKTGITFRAKKVVLTVGTFLGGKIHIGKVSNAGGRAGDQPSN 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI--TNRQI 238 +L F RLKTGTP R+D +++ + E Q D FSF + RQI Sbjct: 182 ALAARLRSLPFRVDRLKTGTPPRIDRRSVDFSVMEVQHGDNPTPYFSFFSKGKIEHPRQI 241 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C IT TN ETH+II +N+ SA+YSG I+ GPRYCPSIEDK+VRF ++ HQIF+EPE Sbjct: 242 PCYITYTNNETHKIITDNLDKSAMYSGLIEGIGPRYCPSIEDKVVRFADKERHQIFVEPE 301 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GLN+ +YPNG+ST+LP E+Q +IR+I G EK I+RPGYAIEYD+ +P++L PTLETK Sbjct: 302 GLNSIELYPNGLSTSLPFEVQCNYIRSIKGFEKAFIMRPGYAIEYDFFDPRDLKPTLETK 361 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I L+ AGQINGTTGYEEA AQGLVA IN+A + +R DSYIGV+IDDL +K Sbjct: 362 HIKNLYFAGQINGTTGYEEAGAQGLVASINAAISIDSDKSWYPTRADSYIGVLIDDLITK 421 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYRMFTSRAEYR+ LR DNAD RL+ +LG + + Q+ F +++ Sbjct: 422 GTKEPYRMFTSRAEYRLILREDNADLRLSDKACELGLLSKEDQQHFISKKNAIIENIAMM 481 Query: 479 KSLVLTSKNLSSTSISF---KQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIE 534 K+ + + + + K+ + T ++ L P+ L I VIE Sbjct: 482 KNTWIGPQTQKARDLEKFLDKKMTRESTLFDLLKRPEIDYSKLQQISELNLNLQDDAVIE 541 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I + Y+ Y RQ + ++ E++ IP DF+YS + LSNE+ +KL+ KP L + Sbjct: 542 QIEISAKYSGYIERQNKDIEKTATLEQKAIPTDFNYSQVKGLSNEVLQKLTEQKPTTLGE 601 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G+TPAA++LL IY+KK Sbjct: 602 ASRIPGITPAAISLLTIYMKK 622 >gi|225575643|ref|ZP_03784253.1| hypothetical protein RUMHYD_03736 [Blautia hydrogenotrophica DSM 10507] gi|225037153|gb|EEG47399.1| hypothetical protein RUMHYD_03736 [Blautia hydrogenotrophica DSM 10507] Length = 646 Score = 781 bits (2018), Expect = 0.0, Method: Composition-based stats. Identities = 262/625 (41%), Positives = 376/625 (60%), Gaps = 5/625 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + SYD++V+G GHAGCEAA A+LG ST + T +I M CNP IGG KGHLVRE Sbjct: 20 LTESYDIVVVGAGHAGCEAALAGARLGFSTVMFTVSVDSIAMMPCNPNIGGSSKGHLVRE 79 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DAL G MG+ D +Q ++LN KGPAV R QAD++ Y M++ + + NL + Q Sbjct: 80 VDALGGEMGKNIDKTFLQSKMLNRSKGPAVHSLRAQADKQRYSNEMRKTLENTPNLTIKQ 139 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 GEV + I+ + ++ C V+L TGT+L+ G + G G +N Sbjct: 140 GEVTKLLVKDGKITGVETYSGAVYDCKAVILCTGTYLKARCIYGNVSSDTGPNGLQAANH 199 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK--ITNRQIE 239 L +S + R KTGTPAR+ G +I + K E+QF DE+++PFSF TD + QI Sbjct: 200 LTDSLRELGIRMYRFKTGTPARIAGNSIDYSKMEEQFGDEKIVPFSFSTDPESVQIPQIS 259 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +T TN TH II EN+ S ++SG I+ GPRYCPSIEDK+VRF ++N HQ+F+EPEG Sbjct: 260 CWLTYTNERTHEIIRENLDRSPLFSGMIEGTGPRYCPSIEDKVVRFADKNRHQVFIEPEG 319 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T+ +Y G+S++LPE++Q+Q R++ GLE I++ YAIEYD I+ ++L TLE K Sbjct: 320 LYTNEMYIGGMSSSLPEDVQYQMYRSVAGLENARIVKSAYAIEYDCIDARQLNATLEFKN 379 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQ NG++GYEEAAAQGLVAGIN+A K D + R+++YIGV+IDDL +K Sbjct: 380 IKGLFSAGQFNGSSGYEEAAAQGLVAGINAALKIQGRDFMVLDRSEAYIGVLIDDLVTKE 439 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRM TSRAEYR+ LR DNAD RL G ++G I E +R + + ++ Sbjct: 440 NHEPYRMMTSRAEYRLLLRQDNADLRLRKKGYEVGLIDEEVYQRTLEKERLIEREIKRIE 499 Query: 480 SLVLTSKNLSSTSISFKQD---GKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 + L + + Q T E + P+ + + L I P+ + V E++ Sbjct: 500 HVTLGASEAVQNVLERYQSTALKSGTTLAELIRRPELNYEILAEIDPERPQLPWDVKEQV 559 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 I Y Y RQ + ++ K E++ IP++ DY + L E K+KL + +P ++ QAS Sbjct: 560 NINIKYDGYIRRQKKQVEQFKKLEEKKIPENIDYDEISGLRIEAKQKLKLYRPMSIGQAS 619 Query: 597 KIEGMTPAALNLLLIYIKKNTVKLN 621 +I G++PA +++LL+Y+ + K Sbjct: 620 RIAGVSPADVSVLLVYMPRFYKKRE 644 >gi|332678488|gb|AEE87617.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Francisella cf. novicida Fx1] Length = 627 Score = 781 bits (2017), Expect = 0.0, Method: Composition-based stats. Identities = 302/621 (48%), Positives = 400/621 (64%), Gaps = 6/621 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + YDVIV+GGGHAG EAA+ +A++GA T L+TH TIG MSCNPAIGG+GKGHLV+ Sbjct: 2 IYDYGYDVIVVGGGHAGVEAASASARIGAKTLLLTHNIDTIGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDA+ G+M + D AGIQFR+LN +KGPAVR R QADR LY+ A+ I +QENLD+ Sbjct: 62 EIDAMGGVMAKAIDMAGIQFRILNSRKGPAVRATRAQADRVLYKKAINSLINNQENLDIF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E N + + + R VVLT GTFL G IHIGK+ GR GD PSN Sbjct: 122 QDSVDDLVVENNTVCGAITKTGITFRAKKVVLTVGTFLGGKIHIGKVSNAGGRAGDQPSN 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI--TNRQI 238 +L F RLKTGTP R+D +++ + E Q D FSF + +QI Sbjct: 182 ALAARLRSLPFRVDRLKTGTPPRIDRRSVDFSVMEVQHGDNPTPYFSFFSKGKIEHPQQI 241 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C IT TN ETH+II +N+ SA+YSG I+ GPRYCPSIEDK+VRF ++ HQIF+EPE Sbjct: 242 PCYITYTNYETHKIITDNLDKSAMYSGLIEGIGPRYCPSIEDKVVRFADKERHQIFVEPE 301 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GLN+ +YPNG+ST+LP E+Q +IR+I G EK I+RPGYAIEYD+ +P++L PTLETK Sbjct: 302 GLNSIELYPNGLSTSLPFEVQCNYIRSIKGFEKAFIMRPGYAIEYDFFDPRDLKPTLETK 361 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I L+ AGQINGTTGYEEA AQGLVAGIN+A + +R DSYIGV+IDDL +K Sbjct: 362 HIKNLYFAGQINGTTGYEEAGAQGLVAGINAAISIDSDKSWYPTRADSYIGVLIDDLITK 421 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYRMFTSRAEYR+ LR DNAD RL+ +LG + + Q+ F +++ Sbjct: 422 GTKEPYRMFTSRAEYRLILREDNADLRLSDKACELGLLSKEDQQHFISKKNAIIENIAMM 481 Query: 479 KSLVLTSKNLSSTSISF---KQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIE 534 K+ + + + + K+ + T ++ L P+ L I VIE Sbjct: 482 KNTWIGPQTQKARDLEKFLDKKMTRESTLFDLLKRPEIDYSKLQQISELNLNLQDEAVIE 541 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I + Y+ Y RQ + ++ E++ IP DF+YS + LSNE+ +KL+ KP L + Sbjct: 542 QIEISAKYSGYIERQNKDIEKTATLEQKAIPTDFNYSQVKGLSNEVLQKLTEQKPTTLGE 601 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G+TPAA++LL IY+KK Sbjct: 602 ASRIPGITPAAISLLTIYMKK 622 >gi|95929980|ref|ZP_01312720.1| glucose inhibited division protein A [Desulfuromonas acetoxidans DSM 684] gi|95133949|gb|EAT15608.1| glucose inhibited division protein A [Desulfuromonas acetoxidans DSM 684] Length = 622 Score = 781 bits (2017), Expect = 0.0, Method: Composition-based stats. Identities = 295/615 (47%), Positives = 410/615 (66%), Gaps = 1/615 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + ++ Y+V+V+G GHAGCEAA AA++G T L+ + MSCNPAIGGL KGHLVR Sbjct: 3 VYDKKYEVVVVGAGHAGCEAALAAARMGHETLLLNMNLDAVAQMSCNPAIGGLAKGHLVR 62 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G M + D GIQFRVLN KKGPAV+ R QADR LY +M+ + +QE LD+ Sbjct: 63 EIDALGGQMAKNIDKTGIQFRVLNTKKGPAVQASRAQADRFLYSQSMKLVVENQEKLDLK 122 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 QG V+ E+N I ++ +++ C VVLTTGTF+RG+IH+G P GR G+ PS Sbjct: 123 QGTVSHLVVEENRIVAVEIKEGWRFNCQCVVLTTGTFMRGLIHVGMNHYPGGRSGEPPSL 182 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIEC 240 L + K FD GRLKTGTP RL +I + KTE+Q D+ PFS++++++ +Q+ C Sbjct: 183 GLSDQLKKLGFDVGRLKTGTPPRLYRGSIDFSKTEEQPGDDTFRPFSYVSEQVNQQQVSC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN +TH II + S +YSG I+ GPRYCPSIEDK+VRF E+ HQ+FLEPEGL Sbjct: 243 YITATNEQTHEIIRSGLDRSPLYSGVIEGVGPRYCPSIEDKVVRFPEKTTHQVFLEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 N+ +YPNG+ T+LP ++Q +F+RTIPGLE V I+R GYAIEYDY++P +L P+LETK I Sbjct: 303 NSSEIYPNGLPTSLPADVQLKFLRTIPGLENVEIMRVGYAIEYDYVDPIQLKPSLETKLI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GLF AGQ+NGT+GYEEAAAQGL+AGIN+ RK + R +YIGV+IDDL + G Sbjct: 363 DGLFHAGQVNGTSGYEEAAAQGLMAGINAVRKIEGKPPVILRRDQAYIGVLIDDLINLGS 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT +G ++G + E+R K ++ + + LL Sbjct: 423 KEPYRMFTSRAEYRLLLREDNADERLTELGYQVGLVDEQRWKHYSTKKKHIDEALKLLVD 482 Query: 481 LVLTSKNLSS-TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 +T+K+ +++ ++ ++A + L P+ +I L + +S V+ +++I Sbjct: 483 ERITAKDKDKIAALNVEKISNGQSAKDLLKRPNITIAQLKGVVDGLDAYSDEVLLQVEIA 542 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQ + ++ K E IP+ FDY+ + +LS E+ EKL ++P NL QAS+I Sbjct: 543 VKYDGYIKRQNDQVEKFKKNELVKIPETFDYTKVQSLSAEVIEKLCKIRPENLGQASRIP 602 Query: 600 GMTPAALNLLLIYIK 614 G+TPAA+ +L + ++ Sbjct: 603 GVTPAAITILSVLLR 617 >gi|288575406|ref|ZP_05976919.2| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria mucosa ATCC 25996] gi|288568066|gb|EFC89626.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria mucosa ATCC 25996] Length = 631 Score = 781 bits (2017), Expect = 0.0, Method: Composition-based stats. Identities = 288/619 (46%), Positives = 391/619 (63%), Gaps = 6/619 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 8 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 67 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY+ A++ + +QENLD+ Q Sbjct: 68 ALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKAAIREMLENQENLDLFQQS 127 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + + IS ++ + VVLT GTFL G IHIG GR GD + SL Sbjct: 128 VDDVTLDGDRISGVITAMGVEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 187 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + + GRLKTGTP R+DG+TI + + +Q D + FS + + RQ+ C I Sbjct: 188 GRLRELNLPQGRLKTGTPPRIDGRTIDFSQLTEQPGDTPVPVFSVRGNADMHPRQVSCWI 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TNL+TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEGL T Sbjct: 248 THTNLKTHEIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEGLTT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK I G Sbjct: 308 NEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKTIQG 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AG N+ + + D + R +Y+GV++DDL +KGV E Sbjct: 368 LFFAGQINGTTGYEEAAAQGLLAGANAVQYVREQDPLLLRREQAYLGVLVDDLITKGVNE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT G K+G + E + + F + + LK+ Sbjct: 428 PYRMFTSRAEYRLQLREDNADMRLTEDGHKIGLVSEAQWRMFNEKREAIEREIQRLKTTW 487 Query: 483 LTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA--RKFSSLVIERLQ 537 T + L+ + ++ + ++ L P+ L ++ S+ VIE+++ Sbjct: 488 YTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGARSSENLSAEVIEQVE 547 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ Y Y RQ E + E +P D DYS + LS E+++KL+ KP + QAS+ Sbjct: 548 IQVKYQGYIDRQNEEIDSRRDIETLKLPDDIDYSKVKGLSAEVQQKLNQHKPETVGQASR 607 Query: 598 IEGMTPAALNLLLIYIKKN 616 I G+TPAA+ LL++++K+ Sbjct: 608 ISGVTPAAVALLMVHLKRG 626 >gi|23100945|ref|NP_694412.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Oceanobacillus iheyensis HTE831] gi|38372364|sp|Q8EKU3|MNMG_OCEIH RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|22779180|dbj|BAC15446.1| glucose-inhibited division protein A [Oceanobacillus iheyensis HTE831] Length = 629 Score = 781 bits (2017), Expect = 0.0, Method: Composition-based stats. Identities = 269/617 (43%), Positives = 386/617 (62%), Gaps = 3/617 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDVIV+G GHAG E+A AA++GA T ++T I M CNP+IGG KG +VREIDA Sbjct: 7 NYDVIVVGAGHAGVESAYAAARMGAKTLMLTLNLDMIAFMPCNPSIGGPAKGIVVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G+MG+V D + IQ R+LN KGPAV+ R QAD+ +Y M+ + ++ENL + QG V Sbjct: 67 LGGIMGKVIDKSYIQMRMLNTGKGPAVQALRAQADKPIYMKEMKHLMENEENLTIRQGMV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E I ++ + ++ +V++TTGTF+RG + +G L+ +G S L Sbjct: 127 NELIVEDGICKGVITETHAAYYADSVIVTTGTFMRGKVLMGDLEYESGPNNQRVSIKLSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 K F+ R KTGTP R++ TI + KTE Q D+ FS+ T + QI C +T Sbjct: 187 DLEKHGFEITRFKTGTPPRVNSHTIDYSKTEIQPGDDNPKSFSYETTEQITDQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH++I +N++ S++YSG + GPRYCPSIEDKIVRF ++ HQIFLEPEG +T+ Sbjct: 247 TNEFTHQVINDNLELSSMYSGMKRGTGPRYCPSIEDKIVRFNDKPRHQIFLEPEGRDTEE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VY G+ST+LPE IQH+ I+++PGLEK I+R GYAIEYD + P +L+PTLETK++ GLF Sbjct: 307 VYVQGLSTSLPESIQHEMIKSVPGLEKAEIMRAGYAIEYDAVVPTQLWPTLETKRLPGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGT+GYEEAA QGL+AG+N+A KS + I R+ +YIGVMIDDL +KG EPY Sbjct: 367 TAGQINGTSGYEEAAGQGLMAGMNAAAKSLNKEPIILDRSQAYIGVMIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 R+ TSRAEYR+ LR DNAD RLT IG G I E R +RF + Q+ + L +++ Sbjct: 427 RLLTSRAEYRLLLRHDNADLRLTDIGYDYGLITEERYQRFTEKKQQIEQEKKRLSKIIIK 486 Query: 485 SKNLSS---TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 + + AY+ + P+ S + + + S V E++ I+ Sbjct: 487 PTEDIQDIMEKAGASRLKEAIKAYDLMKRPELSYDIVDQMIESNLELSEEVKEQVAIQIK 546 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y + + + E + IP+D DY ++ ++ E EKL ++P ++ QAS+I G+ Sbjct: 547 YEGYIKKAKEQVDRMLKMEDKKIPEDIDYDAINGIATEAVEKLKKVRPLSVGQASRISGV 606 Query: 602 TPAALNLLLIYIKKNTV 618 PA +++LL+YI++ ++ Sbjct: 607 NPADVSILLVYIEQGSI 623 >gi|87122925|ref|ZP_01078790.1| glucose-inhibited division protein A [Marinomonas sp. MED121] gi|86161798|gb|EAQ63098.1| glucose-inhibited division protein A [Marinomonas sp. MED121] Length = 629 Score = 781 bits (2017), Expect = 0.0, Method: Composition-based stats. Identities = 289/619 (46%), Positives = 386/619 (62%), Gaps = 7/619 (1%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA+ G T L+TH T+G MSCNPAIGG+GK HLV+EIDAL Sbjct: 7 FDVIVVGGGHAGTEAALAAARTGVKTLLLTHNIETLGQMSCNPAIGGIGKSHLVKEIDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR LN +KGPAVR R QADR LY+ A++ + +QENL + Q V Sbjct: 67 GGAMALATDKGGIQFRTLNSRKGPAVRATRAQADRILYKAAIRHTLENQENLWLFQQSVE 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 E +V Q + TVVLT GTFL G+IH+G GR GD PS L Sbjct: 127 DLIVEDGCARGVVTQTGIRFQSKTVVLTAGTFLGGLIHVGLENHAGGRAGDPPSIGLAEK 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 F RLKTGTP R+D +++ + + Q D+ S+M + + QI C IT Sbjct: 187 LRALPFRVDRLKTGTPPRIDARSVDFSVMQAQPGDDITPVMSYMGSRDLHPAQINCFITH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH II + S +Y+G I GPRYCPSIEDKIVRF ++N HQIF+EPEGL T Sbjct: 247 TNEKTHDIIRGGMDRSPMYTGVIDGIGPRYCPSIEDKIVRFADKNSHQIFVEPEGLTTHE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +YPNGIST+LP ++Q + +R++ G E +I RPGYAIEYDY NP++L +LETK + GLF Sbjct: 307 LYPNGISTSLPFDVQIELVRSMKGFENAHITRPGYAIEYDYFNPQDLKYSLETKHMPGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQINGTTGYEEA AQGL+AG+N++ + + + C R ++YIGV++DDL + G EPY Sbjct: 367 FAGQINGTTGYEEAGAQGLLAGVNASLLAQEKEAWCPRRDEAYIGVLVDDLITMGTKEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+ LR DNAD RLT G +LG I + R F + ++ LKS + Sbjct: 427 RMFTSRAEYRLILREDNADLRLTEKGRELGLIDDERWAAFCAKKEAIETEQARLKSNWIV 486 Query: 485 SKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSI--CPDARKFSSLVIERLQIE 539 + +I+ K + + L P +++ ++ P+ S V E++QI Sbjct: 487 PNTDEAAAINPKLENPITHEYSLMDLLKRPGVEYKDVANLKNAPEEP-VSEQVAEQVQIA 545 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 YA Y RQ + + ++ +E +P D DYS++ LSNE+K+KL KP L AS+I+ Sbjct: 546 VKYAGYISRQAEDIERLRRQENTPLPVDMDYSNIEGLSNEVKQKLIEAKPATLAAASRIQ 605 Query: 600 GMTPAALNLLLIYIKKNTV 618 G+TPAA++LLLI +KK + Sbjct: 606 GITPAAVSLLLISLKKRAI 624 >gi|259048140|ref|ZP_05738541.1| glucose-inhibited division protein A [Granulicatella adiacens ATCC 49175] gi|259035201|gb|EEW36456.1| glucose-inhibited division protein A [Granulicatella adiacens ATCC 49175] Length = 641 Score = 781 bits (2016), Expect = 0.0, Method: Composition-based stats. Identities = 264/626 (42%), Positives = 376/626 (60%), Gaps = 10/626 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +YDV+V+G GHAG EAA +A++GA T L+T + M CNP++GG KG +VREIDA Sbjct: 18 NYDVVVVGAGHAGSEAALASARMGAKTLLLTMNLEMVAFMPCNPSVGGPAKGVVVREIDA 77 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MGR D IQ R+LN KGPAVR R QAD+ LY M++ I QENLD+ QG Sbjct: 78 LGGEMGRNIDKTYIQMRMLNTGKGPAVRALRAQADKHLYAQEMKKTIEKQENLDLRQGIA 137 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E + ++ ++ R VVLT GT RG I IG+LK +G PS L Sbjct: 138 EELIVEDGVCKGVITNTGAIYRSKAVVLTAGTSSRGQIIIGELKYSSGANNSQPSIKLSE 197 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ--IECGI 242 + ++ F+ R KTGTP R+ G +I + KTE Q D+ FSF + R I C + Sbjct: 198 NLLELGFELARFKTGTPPRIKGSSIDYSKTEIQPGDDTPNLFSFTSKDEDYRYDQIPCWL 257 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN +TH I EN+ + +++G ++ G RYCPSIEDKIVRF ++ HQIFLEPEG NT Sbjct: 258 TYTNEQTHETIRENLHRAPMFTGIVEGVGARYCPSIEDKIVRFSDKPRHQIFLEPEGENT 317 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + VY G+ST+LPE++Q + IR++ GLE ++R GYAIEYD + P +L T ETK + Sbjct: 318 EEVYIQGLSTSLPEDVQIKMIRSVEGLENAEMMRTGYAIEYDVVVPHQLKNTFETKLVQN 377 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQ+NGT+GYEEAA QGL AGIN+ RK + R+D+YIGV++DDL +KG E Sbjct: 378 LFTAGQMNGTSGYEEAAGQGLYAGINAVRKIRGEEPFILGRSDAYIGVLVDDLVTKGTTE 437 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYR+ TSRAEYR+ LR DNAD RLT G +LG I + R F + ++S+ Sbjct: 438 PYRLLTSRAEYRLLLRHDNADLRLTEKGRELGLIDDDRYAEFQAKQEAIEAEIKRMQSIR 497 Query: 483 LTSKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 L L+ + +DG + L P+ S L +A + S V E+++ Sbjct: 498 LKPTTELQAFLAEKGSAELKDGI--LLSDLLKRPELSYDELVGFAGEAVEVSREVKEQVE 555 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I Y Y + + + +++K E + IP + DY ++ L+ E +++L +++P + QAS+ Sbjct: 556 ISIKYEGYIAKAIEKVEKLKRMEAKRIPANIDYDAINGLATEARQRLKLIQPETIAQASR 615 Query: 598 IEGMTPAALNLLLIYIKKNTV-KLNE 622 I G+ PA +++L++YI++ + K+ E Sbjct: 616 ISGVNPADVSILMVYIEQGKIAKVQE 641 >gi|150398396|ref|YP_001328863.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Sinorhizobium medicae WSM419] gi|166200617|sp|A6UEE8|MNMG_SINMW RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|150029911|gb|ABR62028.1| glucose inhibited division protein A [Sinorhizobium medicae WSM419] Length = 623 Score = 781 bits (2016), Expect = 0.0, Method: Composition-based stats. Identities = 384/619 (62%), Positives = 476/619 (76%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDVIVIGGGHAGCEAAA +A+LGA T LITHK TIG MSCNPAIGGLGKGHLVREIDA Sbjct: 3 DYDVIVIGGGHAGCEAAAASARLGARTLLITHKKDTIGVMSCNPAIGGLGKGHLVREIDA 62 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 LDGLMGRVADAAGIQFR+LN +KGPAVRGPRTQADR+LYR AMQREI S ENLDV +G+ Sbjct: 63 LDGLMGRVADAAGIQFRLLNRRKGPAVRGPRTQADRKLYREAMQREIASIENLDVAEGDA 122 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 TE ++ VM+D R ++VVLTTGTFLRG+IHIG K+PAGR+G+ PS L Sbjct: 123 FDLQTEDGVVCGAVMKDGRSFRAASVVLTTGTFLRGLIHIGDRKMPAGRVGEQPSVGLSE 182 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + +F GRLKTGTPARLDG+TI W + +Q DE +PFSFMTD I NRQI+CG+TR Sbjct: 183 TLARFGLQLGRLKTGTPARLDGRTIDWGRVGRQGPDENPVPFSFMTDAIVNRQIDCGVTR 242 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T TH+II +NI SA+YSG I+ GPRYCPSIEDKIVRFGER+GHQIFLEPEGL+ D Sbjct: 243 TTDATHKIIADNIHRSAMYSGQIEGVGPRYCPSIEDKIVRFGERDGHQIFLEPEGLDDDT 302 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 VYPNGIST+LPE++Q FIRTIPGLE+V I++PGYAIEYD+++P+EL P+L +++ GLF Sbjct: 303 VYPNGISTSLPEDVQDAFIRTIPGLEQVTILQPGYAIEYDHVDPRELEPSLGVRRMPGLF 362 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 LAGQINGTTGYEEA AQGLVAG+N+A ++ + FSRTDSYIGVMIDDLTS+G+ EPY Sbjct: 363 LAGQINGTTGYEEAGAQGLVAGLNAALRAAERAPFFFSRTDSYIGVMIDDLTSRGIAEPY 422 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RMFTSRAEYR+SLR DNAD RLTP+G++LGC+G R RF ++ Y R+LL+SL +T Sbjct: 423 RMFTSRAEYRLSLRADNADMRLTPVGIELGCVGNARLTRFQQWKSAYEAGRTLLQSLSVT 482 Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544 + QDG+ RTA+E LSYPD SI+ L + P+ + ++ V L+I+++YA Sbjct: 483 PNEGKRFGLKLNQDGQRRTAFEILSYPDQSIEGLRPLWPELQAIATDVAAALEIDAAYAV 542 Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604 Y RQ + ++ EE IP+ FDY SLP LSNELK+KL+ KP NL QA K++G+TPA Sbjct: 543 YMERQAADIIGVQREESTAIPEAFDYESLPGLSNELKQKLAQQKPRNLSQAMKVDGVTPA 602 Query: 605 ALNLLLIYIKKNTVKLNEI 623 A++L+L ++++ + + Sbjct: 603 AISLILSWLRREDRRSKRV 621 >gi|254373130|ref|ZP_04988619.1| glucose inhibited division protein A [Francisella tularensis subsp. novicida GA99-3549] gi|151570857|gb|EDN36511.1| glucose inhibited division protein A [Francisella novicida GA99-3549] Length = 627 Score = 781 bits (2016), Expect = 0.0, Method: Composition-based stats. Identities = 302/621 (48%), Positives = 401/621 (64%), Gaps = 6/621 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + YDVIV+GGGHAG EAA+ +A++GA T L+TH TIG MSCNPAIGG+GKGHLV+ Sbjct: 2 IYDYGYDVIVVGGGHAGVEAASASARIGAKTLLLTHNIDTIGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDA+ G+M + D AGIQFR+LN +KGPAVR R QADR LY+ A+ I +QENLD+ Sbjct: 62 EIDAMGGVMAKAIDMAGIQFRILNSRKGPAVRATRAQADRVLYKKAINSLINNQENLDIF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E N + + + R VVLT GTFL G IHIGK+ GR GD PSN Sbjct: 122 QDSVDDLVVENNTVCGAITKTGITFRAKKVVLTVGTFLGGKIHIGKVSNAGGRAGDQPSN 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI--TNRQI 238 +L F RLKTGTP R+D +++ + E Q D FSF + +QI Sbjct: 182 ALAARLRSLPFRVDRLKTGTPPRIDRRSVDFSVMEVQHGDNPTPYFSFFSKGKIEHPQQI 241 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C IT TN ETH+II +N+ SA+YSG I+ GPRYCPSIEDK+VRF ++ HQIF+EPE Sbjct: 242 PCYITYTNNETHKIITDNLDKSAMYSGLIEGIGPRYCPSIEDKVVRFADKERHQIFVEPE 301 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GLN+ +YPNG+ST+LP E+Q +IR+I G EK I+RPGYAIEYD+ +P++L PTLETK Sbjct: 302 GLNSIELYPNGLSTSLPFEVQCNYIRSIKGFEKAFIMRPGYAIEYDFFDPRDLKPTLETK 361 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I L+ AGQINGTTGYEEA AQGLVAGIN+A + +R DSYIGV+IDDL +K Sbjct: 362 HIKNLYFAGQINGTTGYEEAGAQGLVAGINAAISIDSDKSWYPTRADSYIGVLIDDLITK 421 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYRMFTSRAEYR+ LR DNAD RL+ +LG + + Q+ F + +++ Sbjct: 422 GTKEPYRMFTSRAEYRLILREDNADLRLSDKACELGLLSKEDQQHFISKKNDIIENIAMM 481 Query: 479 KSLVLTSKNLSSTSISF---KQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIE 534 K+ + + + + K+ + T ++ L P+ L I VIE Sbjct: 482 KNTWIGPQTQKARDLEKFLDKKMTRESTLFDLLKRPEIDYSKLQQISELNLNLQDEAVIE 541 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I + Y+ Y RQ + ++ E++ IP DF+YS + LSNE+ +KL+ KP L + Sbjct: 542 QIEISAKYSGYIERQNKDIEKTATLEQKAIPTDFNYSQVKGLSNEVLQKLTEQKPTTLGE 601 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G+TPAA++LL IY+KK Sbjct: 602 ASRIPGITPAAISLLTIYMKK 622 >gi|291547597|emb|CBL20705.1| glucose-inhibited division protein A [Ruminococcus sp. SR1/5] Length = 629 Score = 781 bits (2016), Expect = 0.0, Method: Composition-based stats. Identities = 259/621 (41%), Positives = 378/621 (60%), Gaps = 5/621 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + + +D+IV+G GHAGCEA+ A+LG +T + T +I M CNP +GG KGHLVRE Sbjct: 4 LEQFFDIIVVGAGHAGCEASLACARLGLNTVMFTVSVDSIALMPCNPNVGGSSKGHLVRE 63 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DAL G MG+ D IQ ++LN KGPAV R QAD++ Y M++ + + ENL + Q Sbjct: 64 LDALGGEMGKNIDKTFIQSKMLNQSKGPAVHSLRAQADKQAYSTEMRKTLENTENLTIRQ 123 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 GEV E I+ + + VVL TGT+L+ G + G G +N Sbjct: 124 GEVTELLVEDGHITGVKTFSGATYHAKAVVLCTGTYLKARCIYGDVSNYTGPNGLQAANY 183 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK--ITNRQIE 239 L +S K + R KTGTPAR+ G TI + K E+QF DER++PFSF TD + Q Sbjct: 184 LTDSLKKLGIEMFRFKTGTPARIAGNTIDYSKMEEQFGDERVVPFSFSTDPESVQIEQKS 243 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +T TN +TH II N+ S +YSG I+ GPRYCPSIEDK+VRF ++ HQ+F+EPEG Sbjct: 244 CWLTYTNEKTHEIIRANLDRSPLYSGMIEGTGPRYCPSIEDKVVRFADKKRHQVFIEPEG 303 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T+ +Y G+S++LPE++Q++ ++PGLE I++ YAIEYD INP++L+PTLE KK Sbjct: 304 LYTNEMYIGGMSSSLPEDVQYEMYHSVPGLENARIVKNAYAIEYDCINPRQLYPTLEFKK 363 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF GQ NG++GYEEAAAQGL+AGIN+A + + + R+++YIGV+IDDL +K Sbjct: 364 IKGLFSGGQFNGSSGYEEAAAQGLIAGINAAMEVKGREQLILDRSEAYIGVLIDDLVTKE 423 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRM TSRAEYR+ LR DNAD RL G ++G I + + + + ++ Sbjct: 424 NHEPYRMMTSRAEYRLLLRQDNADLRLRKKGWEVGLIDDETYHKLQEKERRIQEEIERVE 483 Query: 480 -SLVLTSKNLSSTSISFKQ--DGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 + V S + S S T E + P+ + + L I + + V E++ Sbjct: 484 HATVGGSAEVQSLLESLNSTLLKSGTTIAELIRRPELNYKVLAPIDKERPELPEDVCEQV 543 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I Y Y RQM + ++ K E++ +P+D DY + +L E ++KL +P ++ QAS Sbjct: 544 EINIKYDGYIRRQMKQVEQFKKLEQKKLPEDIDYEDVGSLRIEARQKLEAYRPVSIGQAS 603 Query: 597 KIEGMTPAALNLLLIYIKKNT 617 +I G++PA +++LL+Y++ + Sbjct: 604 RISGVSPADISVLLVYLESRS 624 >gi|220936471|ref|YP_002515370.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Thioalkalivibrio sp. HL-EbGR7] gi|254811521|sp|B8GRC9|MNMG_THISH RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|219997781|gb|ACL74383.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Thioalkalivibrio sp. HL-EbGR7] Length = 639 Score = 781 bits (2016), Expect = 0.0, Method: Composition-based stats. Identities = 285/620 (45%), Positives = 390/620 (62%), Gaps = 5/620 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 SYDVIV+GGGHAG EAA +A+ GA T L+TH TIG MSCNPAIGG+GKGHLV+E Sbjct: 3 FEASYDVIVVGGGHAGTEAALASARAGARTLLLTHNIETIGQMSCNPAIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL GLM R AD GI FR LN +KGPAVR R QADR Y+ A++ + + +L + Q Sbjct: 63 IDALGGLMARAADRGGIHFRTLNSRKGPAVRATRAQADRVRYKAAVRSVVENTPHLFLFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E ++ ++ Q R VVLT GTFL G IH+G+++ GR GD PS + Sbjct: 123 QAVDDLIVEGERVAGVITQTGLRFRSPAVVLTVGTFLGGRIHVGEVQHAGGRAGDPPSIA 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQ-IEC 240 L + GRLKTGTP R+DG++I + + +Q D FSF+ + + + C Sbjct: 183 LAARLRELAPRVGRLKTGTPPRIDGRSIDYAQLTEQPGDAPRPVFSFIGARDEHPPQVSC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 I RT TH II + S +YSG I+ GPRYCPSIEDK+VRF +++ HQ+F+EPEGL Sbjct: 243 WIARTTEHTHAIIRGALHRSPMYSGAIEGVGPRYCPSIEDKVVRFADKDSHQVFIEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 +T VYPNGIST+LP ++Q + +R+IPG E+ +I RPGYAIEYDY +P++L P+LET+ + Sbjct: 303 DTHEVYPNGISTSLPFDVQFELVRSIPGFEQAHITRPGYAIEYDYFDPRDLKPSLETRCL 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 +GLF AGQINGTTGYEEAAAQGLVAG+N+AR L C R ++YIGV+IDDL ++G Sbjct: 363 AGLFFAGQINGTTGYEEAAAQGLVAGLNAARSVRDLAPWCPRRDEAYIGVLIDDLITRGT 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLTP+G +G + + R F + L + Sbjct: 423 AEPYRMFTSRAEYRLMLREDNADLRLTPLGRDMGLVDDARWAAFCTKREAVERETQRLAA 482 Query: 481 LVLTSKNLSSTSISFKQDG---KTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERL 536 L + + + G + + + L P+ L + V E++ Sbjct: 483 TRLDPERVDREAAERVIGGAFSREQNLLDLLRRPEVDYAALMGLEGAGPGVEDPRVAEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I + YA Y RQ E + E +P+ DY+++ LS E+++KL+ +P L QA+ Sbjct: 543 EIGAKYAGYIQRQQDEVARQQRHENLALPEGLDYAAITGLSMEVRQKLAAHRPHTLGQAA 602 Query: 597 KIEGMTPAALNLLLIYIKKN 616 +I G+TPAA++LLL+++K+ Sbjct: 603 RIPGVTPAAVSLLLVHVKRQ 622 >gi|74318826|ref|YP_316566.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Thiobacillus denitrificans ATCC 25259] gi|123745347|sp|Q3SF55|MNMG_THIDA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|74058321|gb|AAZ98761.1| Glucose-inhibited division protein A subfamily [Thiobacillus denitrificans ATCC 25259] Length = 632 Score = 780 bits (2015), Expect = 0.0, Method: Composition-based stats. Identities = 291/620 (46%), Positives = 398/620 (64%), Gaps = 5/620 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 S+DVIV+GGGHAG EAA AA++GA T L+TH T+G+MSCNP+IGG+GKGHLVRE Sbjct: 3 FPESFDVIVVGGGHAGTEAALAAARMGAKTLLLTHNIETLGAMSCNPSIGGIGKGHLVRE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DAL G M D AGIQFR LN KGPAVR R QADR LY+ A+++ + +Q L + Q Sbjct: 63 VDALGGAMALATDEAGIQFRTLNSSKGPAVRATRAQADRVLYKAAIRQRLENQPGLTLFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V + + + Q + VVLT GTFL G++H+G AGRMGD P+ S Sbjct: 123 QAVDDLVLDGARVVGVKTQLGILFEARAVVLTAGTFLAGLVHVGLENFQAGRMGDPPAVS 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIEC 240 L + D GRLKTGTP R+DG+TI + +T+ Q D+ FSFM D+ + Q C Sbjct: 183 LAARLRELDLPVGRLKTGTPPRIDGRTIDYSRTQVQPGDDPAPVFSFMGDRSMHPAQRPC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT T + TH II + S +Y+G I+ GPRYCPSIEDKI RF ++ HQIFLEPEGL Sbjct: 243 WITHTTVATHEIIRGGLDRSPLYAGVIEGVGPRYCPSIEDKITRFADKASHQIFLEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 T +YPNGIST+LP ++QH +R+IPGLE +I+RPGYAIEYDY +P+ L +LETK I Sbjct: 303 TTHEIYPNGISTSLPFDVQHAIVRSIPGLEHAHILRPGYAIEYDYYDPRNLKASLETKSI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 +GLF AGQINGTTGYEEAAAQGL+AG+N+A ++ D R ++Y+GV++DDL ++GV Sbjct: 363 AGLFFAGQINGTTGYEEAAAQGLLAGLNAALQTQGKDAWSPGRHEAYLGVLVDDLITRGV 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT G LG + + R +F + E LKS Sbjct: 423 SEPYRMFTSRAEYRLQLREDNADMRLTETGRALGVVDDARWDQFNRKRDEVARETERLKS 482 Query: 481 LVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSI-CPDARKFSSLVIERL 536 + + L ++T + + + + ++ L P+ + ++ A V E++ Sbjct: 483 VWVNPAILPADAATQLIGQPIEREYSLFDLLRRPNLGYAQVLALPGGGAGVADVGVAEQV 542 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I + Y Y RQ E + + +E +P D DY+ L LS E++++L +P L QAS Sbjct: 543 EIAAKYQGYIDRQNEEVDKHREQEGLRLPPDLDYTRLTGLSMEVRQRLQTAQPETLGQAS 602 Query: 597 KIEGMTPAALNLLLIYIKKN 616 +++G+TPAA+++LL+Y K+ Sbjct: 603 RLQGVTPAAISVLLVYAKRG 622 >gi|293602669|ref|ZP_06685110.1| glucose-inhibited division protein A [Achromobacter piechaudii ATCC 43553] gi|292818860|gb|EFF77900.1| glucose-inhibited division protein A [Achromobacter piechaudii ATCC 43553] Length = 639 Score = 780 bits (2015), Expect = 0.0, Method: Composition-based stats. Identities = 297/625 (47%), Positives = 393/625 (62%), Gaps = 13/625 (2%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 +DVIV+GGGHAG EAA AA+ GA T L+TH T+G MSCNP+IGG+GKGHLV+E+D Sbjct: 5 HEFDVIVVGGGHAGTEAALAAARAGARTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D AGIQFR+LN KGPAVR R QADR LYR A++ + +Q NL + Q Sbjct: 65 ALGGAMALATDEAGIQFRILNGSKGPAVRATRAQADRVLYRQAIRGRLENQPNLWLFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + + V Q R TVVLT GTFL G+IH+G GR GD P+ SL Sbjct: 125 VEDLMVEGDRVVGAVTQVGLKFRAKTVVLTAGTFLNGLIHVGLQNYSGGRAGDPPAISLG 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIP-FSFMTDK-ITNRQIECG 241 + GRLKTGTP R+DG++I E+Q D IP FS+M + + RQ+ C Sbjct: 185 QRLKELKLPQGRLKTGTPPRIDGRSINTSILEEQPGDLDPIPVFSYMGNVSMHPRQLPCW 244 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT TN TH II + S +YSG I+ GPRYCPSIEDKI RF ++ HQ+FLEPEGL+ Sbjct: 245 ITHTNSRTHDIIRGGLDRSPMYSGVIEGVGPRYCPSIEDKIHRFADKESHQVFLEPEGLD 304 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T VYPNG+ST+LP ++Q + I ++ GLE +I+RPGYAIEYDY +P+ L TLETK I Sbjct: 305 THEVYPNGVSTSLPFDVQLELIHSLRGLENAHIMRPGYAIEYDYFDPRGLKSTLETKAIG 364 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GLF AGQINGTTGYEEAAAQGL+AGIN+A S D R ++Y+GV++DDL ++GV Sbjct: 365 GLFFAGQINGTTGYEEAAAQGLLAGINAALLSLGRDQWTPRRDEAYLGVLVDDLVTRGVT 424 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+SLR DNAD RLT IG +LG + + R F + LKS Sbjct: 425 EPYRMFTSRAEYRLSLREDNADLRLTEIGRQLGIVDDARWDAFNRKRDAVAAEVERLKSS 484 Query: 482 VLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF--------SS 530 + + L + + K + + + L P+ S + L + Sbjct: 485 WVNPRILPLEVAEPLLGKAIEREYSLADLLKRPNVSYEALMAARNADGSLLAGPGVVGDD 544 Query: 531 LVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPF 590 ++ E+++I+ YA Y RQ E ++ E + IP D DY ++ +LS E+++KL +P Sbjct: 545 VLAEQVEIQVKYAGYIARQQDEVQKQISHELQPIPADVDYDAVTSLSFEVRQKLKTHRPE 604 Query: 591 NLLQASKIEGMTPAALNLLLIYIKK 615 + QA++I G+TPAA++LLLI++K+ Sbjct: 605 TVGQAARISGVTPAAISLLLIHLKR 629 >gi|295691565|ref|YP_003595258.1| glucose inhibited division protein A [Caulobacter segnis ATCC 21756] gi|295433468|gb|ADG12640.1| glucose inhibited division protein A [Caulobacter segnis ATCC 21756] Length = 618 Score = 780 bits (2015), Expect = 0.0, Method: Composition-based stats. Identities = 334/617 (54%), Positives = 439/617 (71%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +++S+DVIVIGGGHAGCEAAA +A+ GA T L+THK TIG MSCNPAIGGLGKGHLVRE Sbjct: 1 MSKSWDVIVIGGGHAGCEAAAASARTGARTLLLTHKLETIGEMSCNPAIGGLGKGHLVRE 60 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDALDG+MGR+AD AGIQFR+LN KGPAVRGPR+Q DR+LYR AMQ E+ S NLD+I Sbjct: 61 IDALDGVMGRMADKAGIQFRMLNRSKGPAVRGPRSQIDRKLYREAMQAELFSTGNLDIIA 120 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 E ++ + + R V+LTTGTFL+GVIH G+ +IPAGR+GD P+ Sbjct: 121 AAAEDLIVEDGKVAGAMDGEGRTYRAPRVILTTGTFLKGVIHRGEERIPAGRVGDQPAIG 180 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECG 241 L + F GRLKTGTPARLDG+TI WD+ + Q AD+ +PFS++ DKI QI CG Sbjct: 181 LSDRLYGLGFQMGRLKTGTPARLDGRTIAWDRLDSQAADDEPVPFSYLNDKIDVPQIACG 240 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 +T T ETHRII E I S +YSG GPRYCPSIEDK+VRF ++ HQIFLEPEGL+ Sbjct: 241 VTFTTEETHRIIAERIGESLVYSGRATGVGPRYCPSIEDKVVRFADKTSHQIFLEPEGLD 300 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 VYPNGIST++ EE Q F+RTIPGLE V ++R GYAIEYDY++P+EL+ TLETK++ Sbjct: 301 DPTVYPNGISTSVSEETQLLFLRTIPGLETVEVLRYGYAIEYDYVDPRELYATLETKRLP 360 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 GL+LAGQINGTTGYEEA AQGLVAG+N+A + + F+R ++YIGVMIDDL ++GV Sbjct: 361 GLYLAGQINGTTGYEEAGAQGLVAGLNAALAEQGREPVVFARDEAYIGVMIDDLVTRGVT 420 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAE+R++LR DNAD RLT G+ LG +GERR +A+ R+ +S+ Sbjct: 421 EPYRMFTSRAEFRLTLRADNADQRLTDRGVALGVVGERRATAWAEKKARLEAARAFARSV 480 Query: 482 VLTSKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 LT DG R + L+YPD ++ +L + P+ +++ V E+++IE++ Sbjct: 481 SLTPNEAVKAGFKVNSDGVRRDVFAMLAYPDVTLDDLGRVWPEVFTWNTDVREQIEIEAA 540 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 YA Y RQ +A+ ++ +E +P D DY+ + +LSNE++EKL+ ++P L QA++IEG+ Sbjct: 541 YAGYLDRQRADAESLRKDEDLRLPADLDYADIGSLSNEVREKLARVRPLTLGQAARIEGV 600 Query: 602 TPAALNLLLIYIKKNTV 618 TP AL LL ++++ Sbjct: 601 TPGALTALLAHVRRTRA 617 >gi|325983682|ref|YP_004296084.1| glucose inhibited division protein A [Nitrosomonas sp. AL212] gi|325533201|gb|ADZ27922.1| glucose inhibited division protein A [Nitrosomonas sp. AL212] Length = 627 Score = 780 bits (2015), Expect = 0.0, Method: Composition-based stats. Identities = 300/619 (48%), Positives = 397/619 (64%), Gaps = 5/619 (0%) Query: 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREI 62 + +D+IV+GGGHAG EAA AA++G T L+TH TIG MSCNP+IGG+GK HLV+EI Sbjct: 4 HTDFDIIVVGGGHAGTEAALAAARMGCQTLLLTHNIETIGQMSCNPSIGGIGKSHLVKEI 63 Query: 63 DALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG 122 DAL G MG AD AGIQFR+LN KGPAVR R QADR LY+ A++ + +Q NL V+Q Sbjct: 64 DALGGAMGMAADEAGIQFRILNSSKGPAVRATRAQADRVLYKQAIRNRVENQPNLRVMQQ 123 Query: 123 EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 V E++ + +V Q I V+LT GTFL G+ HIGK AGR GD PS +L Sbjct: 124 AVDDLIIEQDRVVGVVTQLQIKIHARAVILTVGTFLAGLAHIGKTHFKAGRAGDPPSITL 183 Query: 183 FNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFM-TDKITNRQIECG 241 + +F GRLKTGTP R+DG+T+ + K +Q D+ FS + TD RQI C Sbjct: 184 AQRLREMEFPAGRLKTGTPPRIDGRTMNYAKLLEQPGDQPTPWFSLIATDIRHPRQISCW 243 Query: 242 ITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLN 301 IT TN TH +I + + S ++SG I+ GPRYCPSIEDK+VRF R HQIFLEPEGL Sbjct: 244 ITHTNDRTHDVIRDGLVDSPLFSGKIEGIGPRYCPSIEDKVVRFSARESHQIFLEPEGLG 303 Query: 302 TDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKIS 361 T +YPNGIST+L E+Q + I +I GLE +I RPGYAIEYDY +P+ L +LETK I Sbjct: 304 THEIYPNGISTSLSFEVQVKLIHSIAGLENAHITRPGYAIEYDYFDPRNLKRSLETKTIE 363 Query: 362 GLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL 421 LF AGQINGTTGYEEAAAQGL+AG+N+A K + D R ++Y+GV++DDL + GV Sbjct: 364 NLFFAGQINGTTGYEEAAAQGLLAGVNAALKIQRRDAWVPQRNEAYLGVLVDDLVTSGVT 423 Query: 422 EPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSL 481 EPYRMFTSRAEYR+ LR DNAD RLT G LG I ++R F+ + + L S Sbjct: 424 EPYRMFTSRAEYRLQLREDNADLRLTETGRNLGLIDDQRWAAFSAKQEAIEKEQQRLNST 483 Query: 482 VLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIERLQ 537 + L + + K + T E L PD + +L ++ ++ V+E+++ Sbjct: 484 RVLPGTLPQQDAIRVLGKSIEREYTLTELLKRPDVTYHSLMTLPGAGEPVTNAQVVEQVE 543 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I++ Y Y RQ E E L+PKD DY ++ LSNE+++KL+ KP + QAS+ Sbjct: 544 IQAKYHGYIQRQQEEVSRQAQYENTLLPKDIDYCAVKGLSNEVQQKLNQHKPETVGQASR 603 Query: 598 IEGMTPAALNLLLIYIKKN 616 I G+TPAA++LLL+++K+ Sbjct: 604 ISGVTPAAISLLLVHLKRG 622 >gi|160941471|ref|ZP_02088806.1| hypothetical protein CLOBOL_06362 [Clostridium bolteae ATCC BAA-613] gi|158435617|gb|EDP13384.1| hypothetical protein CLOBOL_06362 [Clostridium bolteae ATCC BAA-613] Length = 631 Score = 780 bits (2015), Expect = 0.0, Method: Composition-based stats. Identities = 262/623 (42%), Positives = 378/623 (60%), Gaps = 9/623 (1%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +YDV+++G GHAGCEAA +A+LG T + T +I M CNP IGG KGHLVRE Sbjct: 11 LEETYDVVIVGAGHAGCEAALASARLGMETIMFTVSVDSIALMPCNPNIGGSSKGHLVRE 70 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DAL G MG+ D IQ ++LN KGPAV R QAD++ Y M+R + + E+L + Q Sbjct: 71 LDALGGEMGKNIDKTFIQSKMLNESKGPAVHSLRAQADKQDYSRHMRRTLENTEHLTIRQ 130 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 EV+ E I + ++ V+L TGT+L+ G + P G G +N Sbjct: 131 AEVSEIMAEDGKIRGVKTFSGAVYYAKAVILCTGTYLKARCIYGDVSNPTGPNGLQAANH 190 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIE 239 L +S + + R KTGTPAR+D K+I + K E+QF D R++PFSF T D+I Q+ Sbjct: 191 LTDSLREHGIEMFRFKTGTPARVDKKSIDFSKMEEQFGDLRIVPFSFSTNPDEIQKDQVS 250 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +T TN THRII +N+ S ++SG I+ GPRYCPSIEDK+V+F ++N HQ+F+EPEG Sbjct: 251 CWLTYTNENTHRIIKDNLDRSPLFSGAIEGTGPRYCPSIEDKVVKFPDKNRHQVFVEPEG 310 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T+ +Y G+S++LPE++Q+ RT+PGLEKV I+R YAIEYD IN +L PTLE KK Sbjct: 311 LYTNEMYLGGMSSSLPEDVQYAMYRTVPGLEKVKIVRNAYAIEYDCINALQLKPTLEFKK 370 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 ISGLF GQ NG++GYEEAA QG +AG+N+ K + + R+ +YIGV+IDDL +K Sbjct: 371 ISGLFAGGQFNGSSGYEEAAVQGFMAGVNAVMKIRGQEAVVLDRSQAYIGVLIDDLVTKE 430 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRM TSRAEYR+ LR DNAD RL IG ++G + + + + + + L+ Sbjct: 431 NHEPYRMMTSRAEYRLLLRQDNADIRLRKIGHEIGLVCDEEYEHLLRKMDDIQSEIKRLE 490 Query: 480 SLVLTSKN-----LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIE 534 V+ + L + + + G T E + P+ L + + V E Sbjct: 491 KTVIGVSDRVQMFLENYGSTLLKSGI--TLAELVKRPELDYVKLAELDEGRPELPDDVRE 548 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 ++ IE Y Y RQM + + K E + +P+DFDYS + +L E +KL+ ++P + Q Sbjct: 549 QVNIEIKYEGYIKRQMQQVAQFKKLEDKKLPEDFDYSEVNSLRREAVQKLNKVQPATIGQ 608 Query: 595 ASKIEGMTPAALNLLLIYIKKNT 617 AS+I G++PA +++LL++ + Sbjct: 609 ASRISGVSPADISVLLVHFTRKQ 631 >gi|261378094|ref|ZP_05982667.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria cinerea ATCC 14685] gi|269145545|gb|EEZ71963.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria cinerea ATCC 14685] Length = 631 Score = 780 bits (2014), Expect = 0.0, Method: Composition-based stats. Identities = 290/619 (46%), Positives = 391/619 (63%), Gaps = 6/619 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 8 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 67 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY+ A++ + +QENLD+ Q Sbjct: 68 ALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKAAIREMLENQENLDLFQQA 127 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + + IS +V + VVLT GTFL G IHIG GR GD + SL Sbjct: 128 VEDVTLDGDRISGVVTAMGVEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 187 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + + GRLKTGTP R+DG+TI + + KQ D + S + ++ RQ+ C I Sbjct: 188 GRLRELNLPQGRLKTGTPPRIDGRTIDFSQLTKQPGDTPVPVMSVRGNAEMHPRQVSCWI 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TNL+TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEGL T Sbjct: 248 THTNLQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEGLTT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK I G Sbjct: 308 HEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKTIQG 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AG N+ + D + R +Y+GV++DDL +KGV E Sbjct: 368 LFFAGQINGTTGYEEAAAQGLLAGANAVQYVRGQDPLLLRREQAYLGVLVDDLITKGVNE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + + LK+ Sbjct: 428 PYRMFTSRAEYRLQLREDNADMRLTEDGYKIGLVGEEQWRMFNEKREAIEREIQRLKTTW 487 Query: 483 LTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA--RKFSSLVIERLQ 537 T + L+ + ++ + ++ L P+ L ++ S+ VIE+++ Sbjct: 488 YTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGARSSENLSAEVIEQVE 547 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ Y Y RQ E + E +P+D DYS + LS E+++KL+ KP + QAS+ Sbjct: 548 IQVKYQGYIDRQNEEIDSRRDIETLKLPEDIDYSKVKGLSAEVQQKLNQHKPETVGQASR 607 Query: 598 IEGMTPAALNLLLIYIKKN 616 I G+TPAA+ LL++++K+ Sbjct: 608 ISGVTPAAVALLMVHLKRG 626 >gi|154503057|ref|ZP_02040117.1| hypothetical protein RUMGNA_00879 [Ruminococcus gnavus ATCC 29149] gi|153796298|gb|EDN78718.1| hypothetical protein RUMGNA_00879 [Ruminococcus gnavus ATCC 29149] Length = 635 Score = 779 bits (2013), Expect = 0.0, Method: Composition-based stats. Identities = 270/622 (43%), Positives = 385/622 (61%), Gaps = 10/622 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDV+++G GHAGCEAA A++G T + T +I M CNP IGG KGHLV+E+DA Sbjct: 14 EYDVVIVGAGHAGCEAALACARMGFQTLMFTVSVDSIALMPCNPNIGGSSKGHLVKEVDA 73 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+V D IQ ++LN KGPAV R QAD+ Y M++ + QENL++ Q EV Sbjct: 74 LGGEMGKVIDRTFIQSKMLNSSKGPAVHSLRAQADKANYSKTMRKVLEDQENLEIKQMEV 133 Query: 125 AGFNTE-----KNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPS 179 E K II+ + + RC VVL TGT+L+ G + + G G P+ Sbjct: 134 TEILAEDGADGKKIITGVRTYSGATYRCRAVVLCTGTYLKARCIYGDVSMQTGPNGLQPA 193 Query: 180 NSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK--ITNRQ 237 N L +S + + R KTGTPAR+D ++I + K E+Q DER++PFSF TD I Q Sbjct: 194 NYLTDSLKELGIEMYRFKTGTPARIDKRSIDFSKMEEQKGDERIVPFSFTTDPEDIQIDQ 253 Query: 238 IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297 + C +T TN +TH II EN+ S ++SG I+ GPRYCPSIEDK+V+F ++N HQ+F+EP Sbjct: 254 VSCWLTYTNEKTHEIIRENLDRSPLFSGMIEGTGPRYCPSIEDKVVKFADKNRHQVFIEP 313 Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357 EGL+T+ +Y G+S++LPE++Q+ R++PGLE I+R YAIEYD I+ ++L TLE Sbjct: 314 EGLDTNEMYVGGMSSSLPEDVQYAMYRSVPGLEHAKIVRNAYAIEYDCIDARQLKSTLEF 373 Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417 K + GLF GQ NG++GYEEAAAQGLVAGIN+ARK + I R++ YIGV+IDDL + Sbjct: 374 KNVEGLFSGGQFNGSSGYEEAAAQGLVAGINAARKLQGKEGIIIDRSEGYIGVLIDDLVT 433 Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSL 477 K EPYRM TSRAEYR+ LR DNAD RLT IG ++G I E R + K ++ Sbjct: 434 KESHEPYRMMTSRAEYRLLLRQDNADLRLTKIGYEVGLIEEERYQNLLKKEEQIQKEIER 493 Query: 478 LKSLVL-TSKNLSSTSIS--FKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIE 534 ++S+ + T+K + S + + + P+ S + L S+ + V E Sbjct: 494 VESVHVGTTKEVQELLESCGSTPLVSGASLADLIRRPELSYEILASVDKMRPELKYDVAE 553 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 ++ I Y Y RQ + ++ K EK+ IP D +Y + +L E K+KLS ++P ++ Q Sbjct: 554 QVNINIKYEGYIKRQKKQVEQFKKLEKKRIPADINYEEVQSLRLEAKQKLSQIRPASIGQ 613 Query: 595 ASKIEGMTPAALNLLLIYIKKN 616 AS+I G++PA +++LL+Y++ Sbjct: 614 ASRISGVSPADISVLLVYLESR 635 >gi|255527593|ref|ZP_05394457.1| glucose inhibited division protein A [Clostridium carboxidivorans P7] gi|296186791|ref|ZP_06855192.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium carboxidivorans P7] gi|255508726|gb|EET85102.1| glucose inhibited division protein A [Clostridium carboxidivorans P7] gi|296048505|gb|EFG87938.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Clostridium carboxidivorans P7] Length = 629 Score = 779 bits (2013), Expect = 0.0, Method: Composition-based stats. Identities = 266/621 (42%), Positives = 386/621 (62%), Gaps = 3/621 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDV+VIG GHAGCEA +A++G T + T ++G M CNP +GG KGHLVREIDA Sbjct: 7 EYDVVVIGAGHAGCEAGLASARMGCKTLMCTMNLDSVGFMPCNPNVGGTAKGHLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG D IQ R+LN KGPAV R QAD++ Y M+ I ++NL + Q EV Sbjct: 67 LGGEMGVNIDHTFIQSRMLNTSKGPAVHSLRAQADKKRYSERMKHVIEKEKNLYLRQIEV 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E N + ++ ++ + + VVLTTGT+LRG I IG++ G G P+N L Sbjct: 127 VDIKVENNKVCGVLTKNGAYFKTKAVVLTTGTYLRGKIIIGEVSYSGGPSGLFPANELSQ 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + + R KTGTPAR++ +++ K +Q DE+++PFSFM+D I Q+ C +T Sbjct: 187 KLIDLGIELRRFKTGTPARVNRRSVDLSKMIEQKGDEKIVPFSFMSDNIDRDQVSCYLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 T +T ++I +NI S +Y+G IKS GPRYCPSIEDK++RF ++ HQIF+EPEG NT+ Sbjct: 247 TTDDTLKVIRDNIHRSPLYNGTIKSVGPRYCPSIEDKVMRFPDKEKHQIFIEPEGENTEE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G S++LPEE+Q +TI GLE V I+R YAIEYD INP++L +LE K I GLF Sbjct: 307 LYVGGASSSLPEEVQLAMYKTIEGLENVEILRTAYAIEYDCINPQQLKLSLEFKSIEGLF 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ+NG++GYEEAAAQG++AGIN++ K + + + R+D+YIGV+IDDL +KG EPY Sbjct: 367 GAGQVNGSSGYEEAAAQGIIAGINASLKIKEKEPLILKRSDAYIGVLIDDLVTKGTEEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSR+EYR+ LR DNAD RLT IG +G + E R +F K + + +K++ + Sbjct: 427 RMMTSRSEYRLILRQDNADLRLTEIGHNIGLVNEERYNKFLKRKKTIEEEVARMKNIQVN 486 Query: 485 SKNLSST---SISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESS 541 K S++ + K+ + YE + P+ + + D + + E + S Sbjct: 487 PKKEVIEFLVSLNSTELKKSISLYELIKRPELDYFKVEPLDNDRIELPDDIKEEVNTISK 546 Query: 542 YAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGM 601 Y Y +Q+ + + K E + IP + DY+ + L E +KLS +KP N+ QAS+I G+ Sbjct: 547 YEGYINKQLEQVVQFKKFENKTIPDNIDYNDINGLRLEAVQKLSKVKPMNIGQASRISGV 606 Query: 602 TPAALNLLLIYIKKNTVKLNE 622 +PA +++LLIY+++ ++ Sbjct: 607 SPADISVLLIYLEREYRSKSQ 627 >gi|121602981|ref|YP_980310.1| tRNA uridine 5-carboxymethylaminomethyl modification protein GidA [Polaromonas naphthalenivorans CJ2] gi|205375705|sp|A1VIB1|MNMG_POLNA RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|120591950|gb|ABM35389.1| glucose inhibited division protein A [Polaromonas naphthalenivorans CJ2] Length = 667 Score = 779 bits (2013), Expect = 0.0, Method: Composition-based stats. Identities = 290/653 (44%), Positives = 387/653 (59%), Gaps = 35/653 (5%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 + +DVIV+GGGHAG EAA AA++G T L+TH T+G MSCNP+IGG+GKGHLV+E+D Sbjct: 5 QEFDVIVVGGGHAGTEAALAAARMGCKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVD 64 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 A+ G M D GIQFR+LN KGPAVR R QADR LY+ A++R I +Q NL + Q Sbjct: 65 AMGGAMALATDEGGIQFRILNGSKGPAVRATRAQADRILYKAAIRRMIENQPNLWLFQQA 124 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V E + + V Q R TVVLT GTFL G IH+G PAGR GD P+ SL Sbjct: 125 VDDLMVEGDRVVGAVTQVGIKFRARTVVLTAGTFLDGKIHVGLNNYPAGRAGDPPAVSLS 184 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADE-------RLIPFSFMTDKITNR 236 + GRLKTGTP R+DG++I + K Q D + FSFM + + Sbjct: 185 ARLKELKLPQGRLKTGTPPRIDGRSIDFSKCGVQPGDGMPGGTPGPVPVFSFMGGNVPHP 244 Query: 237 -QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFL 295 Q+ C IT TN TH II S +++G I GPRYCPS+EDKI RF ++ HQIFL Sbjct: 245 KQVPCWITHTNERTHDIIRSGFDRSPMFTGKIDGVGPRYCPSVEDKINRFAGKDSHQIFL 304 Query: 296 EPEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTL 355 EPEGL T +YPNGIST+LP +IQ+ +R++ G+E +I+RPGYAIEYDY +P+ L Sbjct: 305 EPEGLTTHEIYPNGISTSLPFDIQYALVRSMAGMENAHILRPGYAIEYDYFDPRALKTNF 364 Query: 356 ETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDL 415 ET+ I GLF AGQINGTTGYEEAAAQG+ AGIN+A + + + R ++Y+GV++DDL Sbjct: 365 ETRAIGGLFFAGQINGTTGYEEAAAQGMFAGINAALQCQEKEAWLPKRDEAYLGVLVDDL 424 Query: 416 TSKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLR 475 +KGV EPYRMFTSRAE+R+ LR DNAD RLT G +LG + + R F + + Sbjct: 425 ITKGVTEPYRMFTSRAEFRLMLREDNADMRLTEKGRELGLVDDARWDAFNRKRDIVSRET 484 Query: 476 SLLKSLVLTSKNL---SSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSIC------PDAR 526 L++L + NL + + K + + L PD + L S+ P+ Sbjct: 485 QRLRALWINPNNLPASEAERVLGKAIEREYNLADLLRRPDVNYAGLMSLDGGRYANPEIP 544 Query: 527 ------------------KFSSLVIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDF 568 VIE+++I + YA Y Q +E + E +P D Sbjct: 545 TGNEDVSRETSTDSALPADLVKSVIEQIEITAKYAGYIDLQKVEVERASHYENLKLPADL 604 Query: 569 DYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPAALNLLLIYIKKNTVKLN 621 DY + ALS E ++ LS +P L AS+I+G+TPA ++LLL+++KKN K Sbjct: 605 DYLQVSALSFEARQMLSKHRPETLGLASRIQGITPATISLLLVHLKKNLWKNT 657 >gi|167766871|ref|ZP_02438924.1| hypothetical protein CLOSS21_01388 [Clostridium sp. SS2/1] gi|317499288|ref|ZP_07957561.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lachnospiraceae bacterium 5_1_63FAA] gi|167711419|gb|EDS21998.1| hypothetical protein CLOSS21_01388 [Clostridium sp. SS2/1] gi|291558410|emb|CBL37210.1| glucose-inhibited division protein A [butyrate-producing bacterium SSC/2] gi|316893457|gb|EFV15666.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lachnospiraceae bacterium 5_1_63FAA] Length = 627 Score = 779 bits (2013), Expect = 0.0, Method: Composition-based stats. Identities = 269/619 (43%), Positives = 380/619 (61%), Gaps = 5/619 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + YD+IV+G GHAGCEAA AA++G T T ++ M CNP IGG KGHLV+E Sbjct: 4 LEEKYDIIVVGAGHAGCEAALAAARMGFETICFTVSMDSVALMPCNPNIGGSSKGHLVKE 63 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G MG+ D +Q ++LN KGPAV R QAD+++Y ++M + + + NL + Q Sbjct: 64 IDALGGEMGKNIDKTYLQSKMLNKSKGPAVHSLRAQADKKMYSISMTQVMGNTPNLTLRQ 123 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 GEV E I + ++ VVLTTGT+L+ G++ G G +N Sbjct: 124 GEVTEILVEDGKIKGVKTYSGAVYYAKAVVLTTGTYLKARCIYGEVSNHTGPNGLQAANY 183 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIE 239 L +S R KTGTPAR+D TI + K +QF DER++PFSF + I QI Sbjct: 184 LTDSLKSHGISMRRFKTGTPARIDKNTIDFSKMAEQFGDERIVPFSFTNKEEDIKRDQIS 243 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +T T ETH II ENI S ++SG I+ GPRYCPSIEDKIV+F ++N HQ+F+EPEG Sbjct: 244 CWLTYTTEETHEIIKENIHRSPLFSGAIEGTGPRYCPSIEDKIVKFPDKNRHQVFIEPEG 303 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 T+ +Y G+S++LPE++Q++ ++PGLE I+R YAIEYD I+ +L +LE K+ Sbjct: 304 EYTNEMYVGGMSSSLPEDVQYKMYHSVPGLENAKIVRNAYAIEYDCIDATQLKASLEFKE 363 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF GQ NG++GYEEAAAQGL+AGIN+ARK + D I R+ +YIGV+IDDL +K Sbjct: 364 IDGLFSGGQFNGSSGYEEAAAQGLMAGINAARKLQEKDPIILDRSQAYIGVLIDDLVTKE 423 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRM TSRAEYR+ LR DNAD RLT IG + G I + R + Q+ L+ Sbjct: 424 TQEPYRMMTSRAEYRLLLRQDNADLRLTKIGYEAGLISQERYDKLLVKEQQIEDEMKRLE 483 Query: 480 SLVL-TSKNLSS--TSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 + + SKN+ S + + E + P+ + +L I P+ ++ V E++ Sbjct: 484 DINVGASKNVQSLLEELGSTTLKSSAKMTELIRRPELTYMDLAPIDPERPEYDLDVQEQV 543 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 I Y Y RQ+ + K+ K EK+ IP+D DY + +L E K+KLS ++P ++ QAS Sbjct: 544 NINIKYEGYIKRQLSQVKQFKKMEKKRIPEDIDYEDVGSLRIEAKQKLSKIRPSSIGQAS 603 Query: 597 KIEGMTPAALNLLLIYIKK 615 +I G++PA +++LLIY+++ Sbjct: 604 RISGVSPADISVLLIYLEQ 622 >gi|317472411|ref|ZP_07931736.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Anaerostipes sp. 3_2_56FAA] gi|316900131|gb|EFV22120.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Anaerostipes sp. 3_2_56FAA] Length = 627 Score = 779 bits (2013), Expect = 0.0, Method: Composition-based stats. Identities = 266/619 (42%), Positives = 378/619 (61%), Gaps = 5/619 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + YD++V+G GHAGCEAA +A+LG T T +I M CNP IGG KGHLV+E Sbjct: 4 LEEFYDIVVVGAGHAGCEAALASARLGFKTICFTVSMDSIALMPCNPNIGGSSKGHLVKE 63 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDAL G MG D IQ ++LN KGPAV R QAD+++Y +AM + + + +NL V Q Sbjct: 64 IDALGGEMGVNIDKTYIQSKMLNRSKGPAVHSLRAQADKKMYSMAMTQTMGNTKNLTVRQ 123 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 GEV T+ ++ + ++ V+LTTGT+L+ G + G G +N Sbjct: 124 GEVTQILTQNGKVTGVKTYSGAVYHAKAVILTTGTYLKARCIYGDVSNETGPNGLQAANY 183 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMT--DKITNRQIE 239 L S + R KTGTPAR+D +I ++K E+QF D++++PFSF + I QI Sbjct: 184 LTQSLKDLGIEMRRFKTGTPARIDKNSIDFNKMEEQFGDDKIVPFSFTNTREDIQRDQIS 243 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C +T TN ETH II ENI S ++SG I+ GPRYCPSIEDKIV+F ++N HQ+F+EPEG Sbjct: 244 CWLTYTNEETHEIIRENIGRSPLFSGAIEGTGPRYCPSIEDKIVKFPDKNRHQVFIEPEG 303 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 T+ +Y G+S++LPE++Q+ R++ GLE V IIR YAIEYD IN +L P+LE +K Sbjct: 304 EYTNEMYVGGMSSSLPEDVQYAMYRSVTGLENVKIIRNAYAIEYDCINATQLKPSLEFRK 363 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQ NG++GYEEAAAQGL+AGIN+AR + + R+ +YIGV+IDDL +K Sbjct: 364 IGGLFSAGQFNGSSGYEEAAAQGLIAGINAARMIQGKESLVLDRSQAYIGVLIDDLVTKE 423 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 EPYRM TSRAEYR+ LR DNAD RL+ IG ++G I E R + + + L Sbjct: 424 TSEPYRMMTSRAEYRLLLRQDNADLRLSKIGYEMGLISEERYQNLLEKEARIEKEINRLS 483 Query: 480 SLVLTSKNLSSTSIS---FKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERL 536 + + + +S + + T E + P+ + L I PD ++ V E++ Sbjct: 484 RVNVGASGKVQDLLSKCQSTELKSSATMAELIRRPELTYDMLSPIDPDRPEYPEDVREQV 543 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 I Y Y RQ+ + K+ K EK+ IP+ Y + L E +KLS ++P ++ QAS Sbjct: 544 NINIKYEGYIKRQLSQVKQFKRLEKKKIPEGIKYEDIGNLRIEAIQKLSKIRPASIGQAS 603 Query: 597 KIEGMTPAALNLLLIYIKK 615 +I G++PA +++LLIY+++ Sbjct: 604 RISGVSPADISVLLIYLEQ 622 >gi|118594208|ref|ZP_01551555.1| glucose-inhibited division protein A [Methylophilales bacterium HTCC2181] gi|118439986|gb|EAV46613.1| glucose-inhibited division protein A [Methylophilales bacterium HTCC2181] Length = 631 Score = 779 bits (2013), Expect = 0.0, Method: Composition-based stats. Identities = 296/620 (47%), Positives = 395/620 (63%), Gaps = 4/620 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 +DVIV+GGGHAG EAA +A++G T L+TH T+G MSCNP+IGG+GKGHLV+E Sbjct: 3 FPDKFDVIVVGGGHAGSEAALASARMGQKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKE 62 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 IDA+ G+M R D AGIQFR+LN KGPAVR R QADR LY+ A+++ + +Q++L + Q Sbjct: 63 IDAMGGVMARATDIAGIQFRILNRSKGPAVRATRAQADRVLYKAAIRQFLENQKDLWLFQ 122 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V + + N IS +V Q VVLT GTFL G+IH+G GR GD S + Sbjct: 123 QSVDDVSIKNNKISGVVTQSGIQFFSDNVVLTAGTFLGGLIHVGMESYKGGRAGDPSSET 182 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIEC 240 L + GRLKTGTP R+DG++I + E+Q D FSF+ I + QI C Sbjct: 183 LAAKLKDLNLPVGRLKTGTPPRIDGRSIDYSLMEEQPGDLPTPRFSFIDPLIKHPEQIAC 242 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TNL+TH II + S +Y+G I+ GPRYCPS+EDKI RF ++ HQ+F+EPEGL Sbjct: 243 WITHTNLKTHDIIRSGLDRSPMYTGVIEGIGPRYCPSVEDKIHRFADKESHQVFIEPEGL 302 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 NT VYPNGIST+LP ++Q Q +R+I G+E +I+RPGYAIEYDY +P+ L +LETK I Sbjct: 303 NTHEVYPNGISTSLPFDVQLQLVRSIKGMESAHILRPGYAIEYDYYDPRALKASLETKAI 362 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 +GLF AGQINGTTGYEEAAAQGLVAG N+A +S + SR +SY+GVMIDDL +KGV Sbjct: 363 AGLFFAGQINGTTGYEEAAAQGLVAGTNAALRSKGEEGWSPSRENSYMGVMIDDLITKGV 422 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 EPYRMFTSRAEYR+ LR DNAD RLT LG I E + F K + LK+ Sbjct: 423 SEPYRMFTSRAEYRLLLREDNADLRLTERARTLGLICEHQWTNFNKKQESIKEEEKRLKN 482 Query: 481 LVLTSKN---LSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 +V+ + L + K A++ L P+ S L + D LV E+++ Sbjct: 483 MVIRPSSGSILKQEELFGKALDSEYKAFDLLKRPEVSYDKLMRLIDDEGAMGELVREQVE 542 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I + Y+ Y RQ E + K + + IP + DY ++ + E K+ LS+ KP + QAS+ Sbjct: 543 ILAKYSGYIVRQKAEIERNKGQMQTSIPSNMDYGAVHGIGIEAKQLLSLHKPETVHQASR 602 Query: 598 IEGMTPAALNLLLIYIKKNT 617 I G+TP+ +++LLI++KK Sbjct: 603 ISGITPSTISILLIHLKKYK 622 >gi|153815416|ref|ZP_01968084.1| hypothetical protein RUMTOR_01651 [Ruminococcus torques ATCC 27756] gi|145847275|gb|EDK24193.1| hypothetical protein RUMTOR_01651 [Ruminococcus torques ATCC 27756] Length = 636 Score = 779 bits (2013), Expect = 0.0, Method: Composition-based stats. Identities = 263/620 (42%), Positives = 377/620 (60%), Gaps = 11/620 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YD+ V+G GHAGCEAA A+LG T + T +I M CNP IGG KGHLV+EIDA Sbjct: 14 QYDIAVVGAGHAGCEAALACARLGFKTVMFTVSVDSIALMPCNPNIGGSSKGHLVKEIDA 73 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+V D IQ ++LN KGPAV R QAD+ Y M+R + Q+NLD+ Q EV Sbjct: 74 LGGEMGKVIDKTFIQSKMLNQSKGPAVHSLRAQADKSDYSKEMRRVLEEQDNLDIRQMEV 133 Query: 125 AGFNTEKN------IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSP 178 + I + ++ C V+L TGT+L+ G++ G G Sbjct: 134 TDIIADDPNESGIRKIKGVQTYSGAIYPCKAVILCTGTYLKARCIYGEISTQTGPNGLQS 193 Query: 179 SNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK--ITNR 236 +N L +S R KTGTPAR+D +I + K E+Q DER++PFSF TD + Sbjct: 194 ANYLTDSLKSLGIKMYRFKTGTPARIDKNSIDFTKMEEQKGDERVVPFSFTTDPEDVQID 253 Query: 237 QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLE 296 Q+ C +T TN TH II EN+ S ++SG I+ GPRYCPSIEDK+V+F ++N HQ+F+E Sbjct: 254 QVSCWLTYTNETTHEIIRENLDRSPLFSGAIEGTGPRYCPSIEDKVVKFPDKNRHQVFIE 313 Query: 297 PEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLE 356 PEG++T+ +Y G+S++LPE++Q+ R++PGLE I+R YAIEYD I+ ++L TLE Sbjct: 314 PEGIHTNEMYVGGMSSSLPEDVQYAMYRSVPGLEHAKIVRNAYAIEYDCIDARQLKSTLE 373 Query: 357 TKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 K I GLF GQ NG++GYEEAAAQG+VAGIN+ARK + I R+ YIGV+IDDL Sbjct: 374 FKNIEGLFSGGQFNGSSGYEEAAAQGIVAGINAARKLQGKEGIVIDRSQGYIGVLIDDLV 433 Query: 417 SKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRS 476 +K EPYRM TSRAEYR+ LR DNAD RLT IG K+G I E R ++ + + Sbjct: 434 TKESREPYRMMTSRAEYRLLLRQDNADQRLTKIGYKIGLISEERYEKLLEKERLIEEEIH 493 Query: 477 LLKSLVL-TSKNLSSTSISFK--QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVI 533 ++ + + TS+ + + +++ T E + P+ S + L I + + V Sbjct: 494 RVERVNIGTSEEVQNLLKTYESTPLTSGTTLAELIRRPELSYEKLAPIDKNRKNLPEDVA 553 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 +++ I Y Y RQM + ++ K E + IP+D +Y + +L E K+KL+ ++P ++ Sbjct: 554 QQVDINIKYDGYIKRQMRQVEQFKKLENKKIPEDINYDEIKSLRIEAKQKLNQIRPASIG 613 Query: 594 QASKIEGMTPAALNLLLIYI 613 QAS+I G++PA +++LL+Y+ Sbjct: 614 QASRISGVSPADVSVLLVYL 633 >gi|255068632|ref|ZP_05320487.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria sicca ATCC 29256] gi|255047130|gb|EET42594.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria sicca ATCC 29256] Length = 636 Score = 779 bits (2013), Expect = 0.0, Method: Composition-based stats. Identities = 287/619 (46%), Positives = 391/619 (63%), Gaps = 6/619 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 8 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 67 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY+ A++ + +QENL++ Q Sbjct: 68 ALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKAAIREMLENQENLELFQQS 127 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + + IS ++ + VVLT GTFL G IHIG GR GD + SL Sbjct: 128 VDDVTLDGDRISGVITAMGVEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 187 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + + GRLKTGTP R+DG+TI + + +Q D + FS + + RQ+ C I Sbjct: 188 GRLRELNLPQGRLKTGTPPRIDGRTIDFSRLTEQPGDTPVPVFSVRGNADMHPRQVSCWI 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TNL+TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEGL T Sbjct: 248 THTNLKTHEIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEGLTT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + YPNGIST+LP +IQ Q +R++ GLE +I+RPGYAIEYDY +P+ L +LETK I G Sbjct: 308 NEYYPNGISTSLPFDIQIQLVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKTIQG 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AG N+ + D + R +Y+GV++DDL +KGV E Sbjct: 368 LFFAGQINGTTGYEEAAAQGLLAGANALQYIRGQDPLLLRREQAYLGVLVDDLITKGVNE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT G K+G + E + + F + + LK+ Sbjct: 428 PYRMFTSRAEYRLQLREDNADMRLTEDGHKIGLVSEEQWRMFNEKREAIEREIQRLKTTW 487 Query: 483 LTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDA--RKFSSLVIERLQ 537 T + L+ + ++ + ++ L P+ L ++ S+ VIE+++ Sbjct: 488 YTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGARSSENLSAEVIEQVE 547 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ Y Y RQ E + E +P D DY+ + LS E+++KL+ KP + QAS+ Sbjct: 548 IQVKYQGYIDRQNEEIDSRRDIETLKLPDDIDYAKVKGLSAEVQQKLNQHKPETVGQASR 607 Query: 598 IEGMTPAALNLLLIYIKKN 616 I G+TPAA+ LL++++K+ Sbjct: 608 ISGVTPAAVALLMVHLKRG 626 >gi|325267703|ref|ZP_08134354.1| glucose inhibited division protein A [Kingella denitrificans ATCC 33394] gi|324980827|gb|EGC16488.1| glucose inhibited division protein A [Kingella denitrificans ATCC 33394] Length = 650 Score = 779 bits (2012), Expect = 0.0, Method: Composition-based stats. Identities = 286/619 (46%), Positives = 392/619 (63%), Gaps = 6/619 (0%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 27 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 86 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY+ A++ + +QENL++ Q Sbjct: 87 ALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKAAIREMLENQENLELFQQS 146 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + + IS ++ + VVLT GTFL G IHIG GR GD + SL Sbjct: 147 VDDVTLDGDRISGVITAMGVEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 206 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + + GRLKTGTP R+DG+TI + + +Q D + FS + ++ RQ+ C I Sbjct: 207 GCLRELNLPQGRLKTGTPPRIDGRTIDFSQLTEQPGDTPVPVFSVRGNAEMHPRQVSCWI 266 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TNL+TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEGL T Sbjct: 267 THTNLKTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEGLTT 326 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 + YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK I G Sbjct: 327 NEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKTIQG 386 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AG N+ + D + R +Y+GV++DDL +KGV E Sbjct: 387 LFFAGQINGTTGYEEAAAQGLLAGANAVQYVRGQDPLLLRREQAYLGVLVDDLITKGVNE 446 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + + LK+ Sbjct: 447 PYRMFTSRAEYRLQLREDNADMRLTEDGHKIGLVGEAQWRMFNEKREAIEREIQRLKTTW 506 Query: 483 LTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARK--FSSLVIERLQ 537 T + L+ + ++ + ++ L P+ L ++ + VIE+++ Sbjct: 507 YTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYTALMTLEGAQPECRLPENVIEQVE 566 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I+ Y Y RQ E + E +P++ DYS + LS E+++KL+ KP + QAS+ Sbjct: 567 IQVKYQGYIDRQNEEIDSRRDLETLRLPENIDYSKVKGLSAEVQQKLNQHKPETVGQASR 626 Query: 598 IEGMTPAALNLLLIYIKKN 616 I G+TPAA+ LL++++K+ Sbjct: 627 ISGVTPAAVALLMVHLKRG 645 >gi|254483151|ref|ZP_05096384.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [marine gamma proteobacterium HTCC2148] gi|214036522|gb|EEB77196.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [marine gamma proteobacterium HTCC2148] Length = 643 Score = 779 bits (2012), Expect = 0.0, Method: Composition-based stats. Identities = 282/621 (45%), Positives = 384/621 (61%), Gaps = 5/621 (0%) Query: 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVRE 61 + +DVIVIGGGHAG EA +A++G T L+TH T+G MSCNPAIGG+GK HLV+E Sbjct: 11 YKQQFDVIVIGGGHAGTEACLASARMGCRTLLLTHSVDTLGQMSCNPAIGGIGKSHLVKE 70 Query: 62 IDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ 121 +DAL G MGR D AGIQFRVLN +KGPAVR R QADR LYR A+++ + QENL + Q Sbjct: 71 VDALGGAMGRATDLAGIQFRVLNSRKGPAVRATRAQADRVLYRNAIRQMLEGQENLSIFQ 130 Query: 122 GEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNS 181 V E ++ + Q + R VVLTTGTFL G +HIG GR GD PS + Sbjct: 131 QPVDDLLIESGVVVGAITQMGVVFRAPRVVLTTGTFLGGKLHIGMENSAGGRAGDPPSIA 190 Query: 182 LFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIEC 240 L + F RLKTGTP R+D +++ + + ++Q+ DE L SFM Q C Sbjct: 191 LAQRLRELPFRVERLKTGTPPRIDARSVDFSELDEQWGDEPLPVMSFMGSVDEHPEQRCC 250 Query: 241 GITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGL 300 IT TN TH II + S ++SG I+ GPRYCPS+EDKI RF ++N HQ+F+EPEGL Sbjct: 251 WITHTNERTHDIIRAGLDRSPMFSGVIEGTGPRYCPSVEDKIHRFADKNSHQVFIEPEGL 310 Query: 301 NTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKI 360 + +YPNGIST+LP ++Q + +I G E +I RPGYAIEYD+ +P++L +LETK + Sbjct: 311 TSPELYPNGISTSLPFDVQIDLVHSIKGFENAHITRPGYAIEYDFFDPRDLQSSLETKAL 370 Query: 361 SGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGV 420 GL+ AGQINGTTGYEEAAAQGL+AG+N+A C R ++YIGV++DDL + G Sbjct: 371 PGLYFAGQINGTTGYEEAAAQGLLAGLNAALAVKGEQAWCPRRDEAYIGVLVDDLITMGT 430 Query: 421 LEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKS 480 +EPYRMFTSRAE+R+ LR DNAD RLT G +LG +G+ R +RF + L S Sbjct: 431 MEPYRMFTSRAEHRLLLREDNADLRLTGKGRELGLVGDARWQRFEQKSDAIVSEAERLGS 490 Query: 481 LVLTSKNLSSTSISFK---QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQ 537 L + + ++ K + + + L P+ ++ + + E++ Sbjct: 491 TWLQPGSAEAEKLADKLTSPLAREYSLADLLKRPELDYADIAGLKGE-PTTDLQAAEQVA 549 Query: 538 IESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASK 597 I++ YA Y RQ + ++ E +P D DY + LSNE+K+KL +P L +A + Sbjct: 550 IQAKYAGYIDRQQGDIDRLRRYENAALPADLDYEQVDGLSNEVKQKLGEGRPDTLARAGR 609 Query: 598 IEGMTPAALNLLLIYIKKNTV 618 I G+TPAA++LLLIY+KK Sbjct: 610 IPGVTPAAVSLLLIYLKKRGA 630 >gi|197302261|ref|ZP_03167320.1| hypothetical protein RUMLAC_00988 [Ruminococcus lactaris ATCC 29176] gi|197298692|gb|EDY33233.1| hypothetical protein RUMLAC_00988 [Ruminococcus lactaris ATCC 29176] Length = 630 Score = 779 bits (2012), Expect = 0.0, Method: Composition-based stats. Identities = 267/614 (43%), Positives = 368/614 (59%), Gaps = 5/614 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDV V+G GHAGCEAA A+LG T + T +I M CNP IGG KGHLVRE+DA Sbjct: 14 EYDVAVVGAGHAGCEAALATARLGFKTVMFTVSVDSIALMPCNPNIGGSSKGHLVRELDA 73 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+V D IQ ++LN KGPAV R QAD+ Y M++ + QENLD+ Q EV Sbjct: 74 LGGEMGKVIDRTFIQSKMLNSSKGPAVHSLRAQADKANYSRTMRQVLQKQENLDIRQMEV 133 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 TE I+ + ++ RC VVL TGT+L+ G++ G G +N L + Sbjct: 134 TELLTEDGKITGVQTYSGAIYRCRAVVLCTGTYLKARCIYGEISTHTGPNGLQSANYLTD 193 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK--ITNRQIECGI 242 S R KTGTPAR+D +I + K E+Q DER++PFSF TD + Q C + Sbjct: 194 SLKALGIRMYRFKTGTPARIDKTSIDFTKMEEQKGDERVVPFSFTTDPESVQIDQASCWL 253 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II N+ S ++SG I+ GPRYCPSIEDK+V+F ++N HQ+F+EPEG T Sbjct: 254 TYTNERTHEIIRSNLNRSPLFSGAIEGTGPRYCPSIEDKVVKFPDKNRHQVFIEPEGNET 313 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 +Y G+S++LPE++Q++ R++PGLE IIR YAIEYD I+ ++L TLE K I G Sbjct: 314 TEMYVGGMSSSLPEDVQYEMYRSVPGLEHAKIIRNAYAIEYDCIDARQLKSTLEFKAIEG 373 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF GQ NG++GYEEAAAQGL+AGIN+ARK + I R+ YIGV+IDDL +K E Sbjct: 374 LFSGGQFNGSSGYEEAAAQGLIAGINAARKLQGKEGIVIDRSQGYIGVLIDDLVTKESHE 433 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRM TSRAEYR+ LR DNAD RL+ IG ++G I + R R K + + + Sbjct: 434 PYRMMTSRAEYRLLLRQDNADIRLSAIGHEVGLIDDERYARLLKKEELIAKEIERVNHVN 493 Query: 483 LTSKNLSSTSI---SFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 L + + T E + P+ S + L + + V E++ I Sbjct: 494 LGTSEAVQKLLEAYGSTPLTSGTTLAELIRRPELSYEKLAPVDNARPELPYDVKEQVDIN 553 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 Y Y RQM + ++ K E + IP++ DY S+ +L E K+KL+ ++P ++ QAS+I Sbjct: 554 IKYDGYIKRQMRQVEQFKKLENKRIPENIDYDSIQSLRLEAKQKLNQIRPASIGQASRIS 613 Query: 600 GMTPAALNLLLIYI 613 G++PA +++LL+Y+ Sbjct: 614 GVSPADISVLLVYL 627 >gi|163814996|ref|ZP_02206383.1| hypothetical protein COPEUT_01149 [Coprococcus eutactus ATCC 27759] gi|158449679|gb|EDP26674.1| hypothetical protein COPEUT_01149 [Coprococcus eutactus ATCC 27759] Length = 630 Score = 779 bits (2012), Expect = 0.0, Method: Composition-based stats. Identities = 266/627 (42%), Positives = 377/627 (60%), Gaps = 6/627 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 +++ YDV+++G GHAGCEAA +A+LG +T + T ++ M CNP +GG KGHLVR Sbjct: 3 VLDEEYDVVIVGAGHAGCEAALASARLGLNTIIFTVSMDSVAMMPCNPNVGGSSKGHLVR 62 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDAL G MG+ D IQ ++LN KGPAV R QAD+ Y M+ + + +NL + Sbjct: 63 EIDALGGEMGKNIDKTYIQSKMLNSSKGPAVHSLRAQADKANYSRTMKYTLENTDNLTLR 122 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q EV+ + I+ + + + VVL TGT+L+ G + G G +N Sbjct: 123 QAEVSEILVDDGIVKGVKTYSGATYKAKAVVLCTGTYLKARCIYGDVVYHTGPNGLMAAN 182 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK--ITNRQI 238 L +S R KTGTPARLD +TI + + E+Q DE+++PFSF + I QI Sbjct: 183 HLSDSMKNAGISIRRFKTGTPARLDKRTIDFSQMEEQKGDEKIVPFSFTNTESDIKREQI 242 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C + TN +TH II NI+ S ++SG I+ GPRYCPSIEDK+ +F +++ HQIF+EPE Sbjct: 243 SCWLCYTNEKTHEIIRNNIERSPLFSGVIEGTGPRYCPSIEDKVTKFPDKSRHQIFIEPE 302 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 G T+ +Y G+S++LPE++Q+ I ++ GLE IIR YAIEYD IN L P+LE K Sbjct: 303 GEFTNEMYMGGMSSSLPEDVQYDMIHSMKGLENAKIIRNAYAIEYDCINAINLKPSLEFK 362 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 ISGLF AGQING++GYEEAAAQGL+AGIN+ARK + R+ +YIGV+IDDL +K Sbjct: 363 TISGLFGAGQINGSSGYEEAAAQGLMAGINAARKVQGKTPVVLDRSQAYIGVLIDDLVTK 422 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 EPYRM TSRAEYR+ LR DNAD RLT IG +G I + R +F ++ L Sbjct: 423 ETSEPYRMMTSRAEYRLLLRQDNADIRLTDIGHDIGLIDDERYSKFILKKKQIEKEIYRL 482 Query: 479 KSLVLTSKNLSSTSISFKQDGKTRTA---YEFLSYPDFSIQNLFSICPDARKFSSLVIER 535 ++ ++ + + K +TA E + P+ S +++ I K VIE+ Sbjct: 483 ENTMVGANATIQKFLEKKNSTGLKTAASLAELIRRPELSYEDIEEIDEGREKLPDDVIEQ 542 Query: 536 LQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQA 595 + I Y Y RQ + + K E R +P D DY + L E ++KLS ++P N+ QA Sbjct: 543 INITIKYKGYIDRQNQQVHQFKKLESRRLPDDIDYEQIKNLRLEARQKLSKIRPENIGQA 602 Query: 596 SKIEGMTPAALNLLLIYIKKNTVKLNE 622 S+I G++PA +++LL+Y+K KL+E Sbjct: 603 SRISGVSPADISVLLVYMK-MKGKLSE 628 >gi|317500878|ref|ZP_07959090.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lachnospiraceae bacterium 8_1_57FAA] gi|316897758|gb|EFV19817.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lachnospiraceae bacterium 8_1_57FAA] Length = 636 Score = 779 bits (2012), Expect = 0.0, Method: Composition-based stats. Identities = 261/620 (42%), Positives = 377/620 (60%), Gaps = 11/620 (1%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YD+ V+G GHAGCEAA A+LG T + T +I M CNP IGG KGHLV+EIDA Sbjct: 14 QYDIAVVGAGHAGCEAALACARLGFKTVMFTVSVDSIALMPCNPNIGGSSKGHLVKEIDA 73 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG+V D IQ ++LN KGPAV R QAD+ Y M+R + Q+NLD+ Q EV Sbjct: 74 LGGEMGKVIDKTFIQSKMLNQSKGPAVHSLRAQADKSDYSKEMRRVLEEQDNLDIRQMEV 133 Query: 125 AGFNTEKN------IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSP 178 + I + ++ C V+L TGT+L+ G++ G G Sbjct: 134 TDIIADDPNESGIRKIKGVQTYSGAIYPCKAVILCTGTYLKARCIYGEISTQTGPNGLQS 193 Query: 179 SNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK--ITNR 236 +N L +S R KTGTPAR+D +I + K E+Q DER++PFSF TD + Sbjct: 194 ANYLTDSLKSLGIKMYRFKTGTPARIDKNSIDFTKMEEQKGDERVVPFSFTTDPEDVQID 253 Query: 237 QIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLE 296 Q+ C +T TN TH II EN+ S ++SG I+ GPRYCPSIEDK+V+F ++N HQ+F+E Sbjct: 254 QVSCWLTYTNETTHEIIRENLDRSPLFSGAIEGTGPRYCPSIEDKVVKFPDKNRHQVFIE 313 Query: 297 PEGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLE 356 PEG++T+ +Y G+S++LPE++Q+ R++PGLE I+R YAIEYD I+ ++L TLE Sbjct: 314 PEGIHTNEMYVGGMSSSLPEDVQYAMYRSVPGLEHAKIVRNAYAIEYDCIDARQLKSTLE 373 Query: 357 TKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLT 416 K I GLF GQ NG++GYEEAAAQG+VAGIN+ARK + I R+ YIGV+IDDL Sbjct: 374 FKNIEGLFSGGQFNGSSGYEEAAAQGIVAGINAARKLQGKEGIVIDRSQGYIGVLIDDLV 433 Query: 417 SKGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRS 476 +K EPYRM TSRAEYR+ LR DNAD RLT +G ++G I E R ++ + + Sbjct: 434 TKESREPYRMMTSRAEYRLLLRQDNADQRLTKLGYEIGLISEERYEKLLEKERLIEEEIH 493 Query: 477 LLKSLVL-TSKNLSSTSISFK--QDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVI 533 ++ + + TS+ + + +++ T E + P+ S + L I + + V Sbjct: 494 RVERVNIGTSEEVQNLLKTYESTPLTSGTTLAELIRRPELSYEKLAPIDKNRKNLPEDVA 553 Query: 534 ERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLL 593 +++ I Y Y RQM + ++ K E + IP+D +Y + +L E K+KL+ ++P ++ Sbjct: 554 QQVDINIKYDGYIKRQMRQVEQFKKLENKKIPEDINYDEIKSLRIEAKQKLNQIRPASIG 613 Query: 594 QASKIEGMTPAALNLLLIYI 613 QAS+I G++PA +++LL+Y+ Sbjct: 614 QASRISGVSPADVSVLLVYL 633 >gi|225025383|ref|ZP_03714575.1| hypothetical protein EIKCOROL_02281 [Eikenella corrodens ATCC 23834] gi|224941827|gb|EEG23036.1| hypothetical protein EIKCOROL_02281 [Eikenella corrodens ATCC 23834] Length = 631 Score = 779 bits (2012), Expect = 0.0, Method: Composition-based stats. Identities = 287/622 (46%), Positives = 394/622 (63%), Gaps = 6/622 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVR Sbjct: 5 LYPKTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVR 64 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 E+DAL G M D +GIQFR LN KG AVR R QADR LY+ A++ + +QENLD+ Sbjct: 65 ELDALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKAAIREMLENQENLDLF 124 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V + + IS ++ + VVLT GTFL G IHIG GR GD + Sbjct: 125 QQSVDDVTLDGDRISGVITAMGVEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAK 184 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIE 239 SL + + GRLKTGTP R+DG+TI + + +Q D + FS + + RQ+ Sbjct: 185 SLGGRLRELNLPQGRLKTGTPPRIDGRTIDFSQLTEQPGDTPVPVFSVRGNADMHPRQVS 244 Query: 240 CGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEG 299 C IT TNL+TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEG Sbjct: 245 CWITHTNLKTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEG 304 Query: 300 LNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKK 359 L T+ YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK Sbjct: 305 LTTNEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKT 364 Query: 360 ISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKG 419 I GLF AGQINGTTGYEEAAAQGL+AG N+ + + D + R +Y+GV++DDL +KG Sbjct: 365 IQGLFFAGQINGTTGYEEAAAQGLLAGANAVQYIREQDPLLLRREQAYLGVLVDDLITKG 424 Query: 420 VLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLK 479 V EPYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + + LK Sbjct: 425 VNEPYRMFTSRAEYRLQLREDNADMRLTEDGHKIGLVGEAQWRMFNEKREAIEREIQRLK 484 Query: 480 SLVLTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARK--FSSLVIE 534 ++ T + L+ + ++ + ++ L P+ L ++ + VIE Sbjct: 485 TMWYTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGAEPECRLPENVIE 544 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I+ Y Y RQ E + E +P++ DYS + LS E+++KL+ KP + Q Sbjct: 545 QVEIQVKYQGYIDRQNEEIDSRRDLETLRLPENIDYSKVKGLSAEVQQKLNQHKPETVGQ 604 Query: 595 ASKIEGMTPAALNLLLIYIKKN 616 AS+I G+TPAA+ LL++++K+ Sbjct: 605 ASRISGVTPAAVALLMVHLKRG 626 >gi|20809124|ref|NP_624295.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Thermoanaerobacter tengcongensis MB4] gi|254479395|ref|ZP_05092728.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Carboxydibrachium pacificum DSM 12653] gi|22095715|sp|Q8R6K9|MNMG2_THETN RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG 2; AltName: Full=Glucose-inhibited division protein A 2 gi|20517804|gb|AAM25899.1| NAD/FAD-utilizing enzyme apparently involved in cell division [Thermoanaerobacter tengcongensis MB4] gi|214034664|gb|EEB75405.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Carboxydibrachium pacificum DSM 12653] Length = 633 Score = 779 bits (2012), Expect = 0.0, Method: Composition-based stats. Identities = 260/622 (41%), Positives = 380/622 (61%), Gaps = 4/622 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 YDV V+G GHAG EAA +A+LG +T I M+CNP+IGG K LVREIDA Sbjct: 7 EYDVCVVGLGHAGSEAALASARLGLATVGFATNLDAIALMACNPSIGGPAKAQLVREIDA 66 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G M D + +Q R LN KGPAVR R Q D++LY+ M+ + Q+NLD+ Q E+ Sbjct: 67 LGGEMAVNTDKSLLQMRTLNTSKGPAVRSLRAQVDKKLYQANMKHTLERQKNLDIKQAEI 126 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 E N + +V + ++ +C ++TTGTFLRG + IG++ +G G P+ L Sbjct: 127 VDILVENNKVVGVVTKLGAIYKCKACIITTGTFLRGRVIIGEVGFESGPSGLFPAKELSE 186 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244 + + F R T TP R+D +T+ + K Q DE + PFSFM DKI QI C +T Sbjct: 187 AIKRLGFKMMRFNTSTPPRVDKRTVDFSKMIMQPGDEVITPFSFMHDKIEIEQIPCWLTY 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN +TH+II +NI + +Y+G+++ G RYCPSIEDK+++F R+ HQIF+EPEG +T Sbjct: 247 TNEKTHKIIRDNIHRAPLYTGEVEGVGVRYCPSIEDKVMKFPHRDRHQIFVEPEGRDTYE 306 Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364 +Y G+ ++ PE++Q + + TIPGLE I+RP YAIEYD I+P +L TLETK + GL+ Sbjct: 307 MYIQGLFSSFPEDLQMEILSTIPGLENAKIMRPAYAIEYDCIDPTQLKATLETKLVEGLY 366 Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424 AGQ+NGT+GYEEAAAQGL+AGIN+A K + R+ +YIG++IDDL +KG EPY Sbjct: 367 FAGQVNGTSGYEEAAAQGLMAGINAALKILGKPPLILDRSQAYIGILIDDLVTKGTNEPY 426 Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484 RM TSRAEYR+ LR DNAD RLT IG ++G + E R ++F + + L ++++ Sbjct: 427 RMLTSRAEYRLILRQDNADFRLTEIGKEIGLVTEERYEKFLRKKIQLEKEMMRLPTVMVR 486 Query: 485 SKNLSSTSISFKQDGKTRT---AYEFLSYPDFSIQNLFSICPDAR-KFSSLVIERLQIES 540 + + + + Y L P+ ++ + P V E++ I Sbjct: 487 PTEEVNNFLISRGSTPLVSGVDLYTLLKRPEIDYKSTKFLDPTRPDDILDSVAEQIDINI 546 Query: 541 SYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEG 600 Y Y +Q+ + ++ K E + IP+D DY + LSNE KEKLS ++P ++ QAS+I G Sbjct: 547 KYEGYILKQLRQVEQFKAMENKKIPEDIDYYQVHGLSNEAKEKLSKIRPTSVGQASRISG 606 Query: 601 MTPAALNLLLIYIKKNTVKLNE 622 ++PA +++LLIY+++ K ++ Sbjct: 607 VSPADISVLLIYLQQMRRKRSD 628 >gi|56708268|ref|YP_170164.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Francisella tularensis subsp. tularensis SCHU S4] gi|110670739|ref|YP_667296.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Francisella tularensis subsp. tularensis FSC198] gi|224457388|ref|ZP_03665861.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Francisella tularensis subsp. tularensis MA00-2987] gi|254370751|ref|ZP_04986756.1| glucose inhibited division protein A [Francisella tularensis subsp. tularensis FSC033] gi|254875088|ref|ZP_05247798.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Francisella tularensis subsp. tularensis MA00-2987] gi|81170542|sp|Q5NFM8|MNMG_FRATT RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|123359437|sp|Q14H30|MNMG_FRAT1 RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|56604760|emb|CAG45838.1| glucose inhibited division protein A [Francisella tularensis subsp. tularensis SCHU S4] gi|110321072|emb|CAL09221.1| glucose inhibited division protein A [Francisella tularensis subsp. tularensis FSC198] gi|151568994|gb|EDN34648.1| glucose inhibited division protein A [Francisella tularensis subsp. tularensis FSC033] gi|254841087|gb|EET19523.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA [Francisella tularensis subsp. tularensis MA00-2987] gi|282159495|gb|ADA78886.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Francisella tularensis subsp. tularensis NE061598] Length = 627 Score = 779 bits (2012), Expect = 0.0, Method: Composition-based stats. Identities = 302/621 (48%), Positives = 399/621 (64%), Gaps = 6/621 (0%) Query: 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVR 60 + + YDVIV+GGGHAG EAA+ +A++GA T L+TH TIG MSCNPAIGG+GKGHLV+ Sbjct: 2 IYDYGYDVIVVGGGHAGVEAASASARIGAKTLLLTHNIDTIGQMSCNPAIGGIGKGHLVK 61 Query: 61 EIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVI 120 EIDA+ G+M + D AGIQFR+LN +KGPAVR R QADR LY+ A+ I +QENLD+ Sbjct: 62 EIDAMGGVMAKAIDMAGIQFRILNSRKGPAVRATRAQADRLLYKKAINSLINNQENLDIF 121 Query: 121 QGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180 Q V E N + + + R VVLT GTFL G IHIGK+ GR GD PSN Sbjct: 122 QDSVDDLVVENNTVCGAITKTGITFRAKKVVLTVGTFLGGKIHIGKVSNAGGRAGDQPSN 181 Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI--TNRQI 238 +L F RLKTGTP R+D +++ + E Q D FSF + RQI Sbjct: 182 ALAARLRSLPFRVDRLKTGTPPRIDRRSVDFSVMEVQHGDNPTPYFSFFSKGKIEHPRQI 241 Query: 239 ECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPE 298 C IT TN ETH+II +N+ SA+YSG I+ GPRYCPSIEDK+VRF ++ HQIF+EPE Sbjct: 242 PCYITYTNNETHKIITDNLDKSAMYSGLIEGIGPRYCPSIEDKVVRFADKERHQIFVEPE 301 Query: 299 GLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETK 358 GLN+ +YPNG+ST+LP E+Q +IR+I G EK I+RPGYAIEYD+ +P++L PTLETK Sbjct: 302 GLNSIELYPNGLSTSLPFEVQCNYIRSIKGFEKAFIMRPGYAIEYDFFDPRDLKPTLETK 361 Query: 359 KISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSK 418 I L+ AGQINGTTGYEEA AQGLVA IN+A + +R DSYIGV+IDDL +K Sbjct: 362 HIKNLYFAGQINGTTGYEEAGAQGLVASINAAISIDSDKSWYPTRADSYIGVLIDDLITK 421 Query: 419 GVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLL 478 G EPYRMFTSRAEYR+ LR DNAD RL+ +LG + + Q+ F +++ Sbjct: 422 GTKEPYRMFTSRAEYRLILREDNADLRLSNKACELGLLSKEDQQHFISKKNAIIENIAMM 481 Query: 479 KSLVLTSKNLSSTSISF---KQDGKTRTAYEFLSYPDFSIQNLFSICPDARKF-SSLVIE 534 K+ + + + + K+ + T ++ L P+ L I VIE Sbjct: 482 KNTWIGPQTQKARDLEKFLDKKMTRESTLFDLLKRPEIDYSKLQQISELNLNLQDDAVIE 541 Query: 535 RLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQ 594 +++I + Y+ Y RQ + ++ E++ IP DF+YS + LSNE+ +KL+ KP L + Sbjct: 542 QIEISAKYSGYIERQNKDIEKTATFEQKAIPTDFNYSQVKGLSNEVLQKLTEQKPTTLGE 601 Query: 595 ASKIEGMTPAALNLLLIYIKK 615 AS+I G+TPAA++LL IY+KK Sbjct: 602 ASRIPGITPAAISLLTIYMKK 622 >gi|152991329|ref|YP_001357051.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Nitratiruptor sp. SB155-2] gi|205375702|sp|A6Q5D5|MNMG_NITSB RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|151423190|dbj|BAF70694.1| glucose inhibited division protein A [Nitratiruptor sp. SB155-2] Length = 625 Score = 779 bits (2012), Expect = 0.0, Method: Composition-based stats. Identities = 286/621 (46%), Positives = 390/621 (62%), Gaps = 5/621 (0%) Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64 +DVIVIGGGHAG EAA +A++G T +IT IG+ SCNPAIGGL KGHLV+EIDA Sbjct: 2 KFDVIVIGGGHAGIEAALASARMGMKTLMITILAEQIGAASCNPAIGGLAKGHLVKEIDA 61 Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124 L G MG D GIQFR+LN KGPAVRG R Q D + YR+ M+ +L+ NL+V Q V Sbjct: 62 LGGQMGLTTDKTGIQFRILNASKGPAVRGSRAQIDMDRYRIMMRTIVLNTPNLEVRQEMV 121 Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184 + + + + ++ V++TTGTFLRG+IHIG++K AGR G+ SN+L + Sbjct: 122 DRLLIKGDAVVGVETNLKNVYHAKKVIVTTGTFLRGLIHIGEIKQEAGRAGEFASNALSD 181 Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK--ITNRQIECGI 242 S GRLKTGT AR+D KTI + + E Q DE IPFSF TD+ Q+ C I Sbjct: 182 SLKSLGLRLGRLKTGTCARIDAKTIDFSRMEVQPGDENPIPFSFRTDRKRFNPTQLPCYI 241 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TN TH II N + +++G I+ GPRYCPSIEDKI RF ++ H IF+EP+ L Sbjct: 242 TYTNERTHEIIESNFHRAPLFTGQIEGVGPRYCPSIEDKIYRFRDKERHHIFVEPQTLEA 301 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 Y NG+ST+LP ++Q + IR++ GLE ++R GYAIEYD+++P +L TLETK I Sbjct: 302 TEYYINGMSTSLPPDVQLEMIRSVKGLEHAEVVRYGYAIEYDFVDPTQLKHTLETKSIKN 361 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 L+ AGQINGTTGYEEAAAQGL+AGIN+A + + + R ++YIGV+IDDL +KG E Sbjct: 362 LYCAGQINGTTGYEEAAAQGLMAGINAALAIKEQEPLILGRDEAYIGVLIDDLVTKGTKE 421 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAE+R+ LR DNAD RL P G KLG + E + + ++ LLK+ Sbjct: 422 PYRMFTSRAEFRLLLREDNADLRLMPYGHKLGLVDEETYMKMIRKKEQIEKGLDLLKNSF 481 Query: 483 LTSKNLSSTSISFKQDGKTRT---AYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIE 539 +T + +S ++GK ++ P F+++ L + P+ ++FS E++ IE Sbjct: 482 ITPNKETLELLSSLEEGKITDKTALVNVVARPTFTMEKLEVLVPEIQEFSEEAKEQILIE 541 Query: 540 SSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIE 599 + Y Y Q + +++ IP+D D ++ LSNE+KEKL KP L AS+I Sbjct: 542 AKYHQYIQMQKEQIEKMHELMNVKIPEDLDIDAISGLSNEVKEKLKAHKPPTLFAASQIS 601 Query: 600 GMTPAALNLLLIYIKKNTVKL 620 G+TPAA+ +L IYIK + + Sbjct: 602 GITPAAIEILHIYIKMHQKRR 622 >gi|294668652|ref|ZP_06733748.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291309414|gb|EFE50657.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 631 Score = 779 bits (2012), Expect = 0.0, Method: Composition-based stats. Identities = 291/620 (46%), Positives = 395/620 (63%), Gaps = 8/620 (1%) Query: 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREID 63 ++YDVIV+GGGHAG EAA AA++GA T L+TH T+G MSCNP+IGG+GKGHLVRE+D Sbjct: 8 KTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELD 67 Query: 64 ALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGE 123 AL G M D +GIQFR LN KG AVR R QADR LY+ A++ + +QENLD+ Q Sbjct: 68 ALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKAAIREMLENQENLDLFQQS 127 Query: 124 VAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLF 183 V + N IS ++ + VVLT GTFL G IHIG GR GD + SL Sbjct: 128 VDDVTLDGNRISGVITAMGVEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLG 187 Query: 184 NSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTD-KITNRQIECGI 242 + + GRLKTGTP R+DG+TI + + +Q D + FS + ++ RQ+ C I Sbjct: 188 GRLRELNLPQGRLKTGTPPRIDGRTIDFSRLTEQPGDTPVPVFSVRGNAEMHPRQVSCWI 247 Query: 243 TRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 T TNL TH II S +++G I+ GPRYCPSIEDKI RF +++ HQIFLEPEGL T Sbjct: 248 THTNLHTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEGLTT 307 Query: 303 DVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISG 362 YPNGIST+LP +IQ +R++ GLE +I+RPGYAIEYDY +P+ L +LETK I G Sbjct: 308 HEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKTIQG 367 Query: 363 LFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLE 422 LF AGQINGTTGYEEAAAQGL+AG N+ + + D + R +Y+GV++DDL +KGV E Sbjct: 368 LFFAGQINGTTGYEEAAAQGLLAGANAVQYIREQDPLLLRREQAYLGVLVDDLITKGVNE 427 Query: 423 PYRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLV 482 PYRMFTSRAEYR+ LR DNAD RLT G K+G +GE + + F + + LK+ Sbjct: 428 PYRMFTSRAEYRLQLREDNADMRLTEDGYKIGLVGEAQWRMFNEKREAIEREIQRLKTTW 487 Query: 483 LTSKNLSSTS---ISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDAR---KFSSLVIERL 536 T + L+ + ++ + ++ L P+ L ++ PDA+ + V+E++ Sbjct: 488 YTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTL-PDAQPETALADSVVEQV 546 Query: 537 QIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQAS 596 +I+ Y Y RQ E + E +P+D DYS + LS E+++KL+ KP + QAS Sbjct: 547 EIQVKYQGYIDRQNEEIDSRRDIETLKLPEDIDYSKVKGLSAEVQQKLNQHKPETVGQAS 606 Query: 597 KIEGMTPAALNLLLIYIKKN 616 +I G+TPAA+ LL++++K+ Sbjct: 607 RISGVTPAAVTLLMVHLKRG 626 >gi|119896433|ref|YP_931646.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Azoarcus sp. BH72] gi|166222905|sp|A1K1Q4|MNMG_AZOSB RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; AltName: Full=Glucose-inhibited division protein A gi|119668846|emb|CAL92759.1| glucose inhibited division protein A [Azoarcus sp. BH72] Length = 634 Score = 779 bits (2012), Expect = 0.0, Method: Composition-based stats. Identities = 282/617 (45%), Positives = 389/617 (63%), Gaps = 6/617 (0%) Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65 +DVIV+GGGHAG EAA AA++G T L++H T+G MSCNP+IGG+GKGHLV+E+DAL Sbjct: 7 FDVIVVGGGHAGTEAALAAARMGCRTLLLSHNIETLGQMSCNPSIGGIGKGHLVKEVDAL 66 Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125 G M D GIQFR+LN KGPAVR R QADR LY+ A+++ + +Q NL + Q V Sbjct: 67 GGAMAAATDEGGIQFRILNASKGPAVRATRAQADRVLYKAAIRKRLENQPNLWLFQQAVD 126 Query: 126 GFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNS 185 + ++ +V Q VVLT GTFL G+IH+G AGR GD P+ SL Sbjct: 127 DLTVAGDRVTGVVTQIGLRFEAPAVVLTAGTFLNGLIHVGLEHYSAGRAGDPPAISLGQR 186 Query: 186 FMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNR-QIECGITR 244 + GRLKTGTP RLD ++I + Q D+ + FSF+ + Q+ C +T Sbjct: 187 LKELALPQGRLKTGTPPRLDARSIDFSVMTVQPGDDPVPVFSFLGSAAQHPAQLPCWMTH 246 Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304 TN TH +I N+ S +YSG I+ GPRYCPSIEDKI RF +++ H IFLEPEGL T Sbjct: 247 TNTRTHDVIRANLDRSPMYSGVIEGVGPRYCPSIEDKIHRFADKDSHNIFLEPEGLTTHE 306 Quer