RPSBLAST alignment for GI: 254780808 and conserved domain: TIGR00136
>gnl|CDD|129242 TIGR00136, gidA, glucose-inhibited division protein A. GidA, the longer of two forms of GidA-related proteins, appears to be present in all complete eubacterial genomes so far, as well as Saccharomyces cerevisiae. A subset of these organisms have a closely related protein. GidA is absent in the Archaea. It appears to act with MnmE, in an alpha2/beta2 heterotetramer, in the 5-carboxymethylaminomethyl modification of uridine 34 in certain tRNAs. The shorter, related protein, previously called gid or gidA(S), is now called TrmFO (see model TIGR00137). Length = 617
Score = 781 bits (2019), Expect = 0.0
Identities = 316/617 (51%), Positives = 405/617 (65%), Gaps = 9/617 (1%)
Query: 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65
+DVIVIGGGHAGCEAA AA++GA T L+T TIG SCNPAIGG KG LV+EIDAL
Sbjct: 1 FDVIVIGGGHAGCEAALAAARMGAKTLLLTLNLDTIGKCSCNPAIGGPAKGILVKEIDAL 60
Query: 66 DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125
GLMG+ AD AG+QFRVLN KGPAVR R Q D+ LYR AM+ + +Q NL + QGEV
Sbjct: 61 GGLMGKAADKAGLQFRVLNSSKGPAVRATRAQIDKVLYRKAMRNALENQPNLSLFQGEVE 120
Query: 126 GFNTEKN-IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184
E N I +V QD R V++TTGTFLRG IHIG AGR G+ PS L
Sbjct: 121 DLILEDNDEIKGVVTQDGLKFRAKAVIITTGTFLRGKIHIGDKSYSAGRAGEQPSIGLST 180
Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK-ITNRQIECGIT 243
+ + F GRLKTGTP R+D ++I + K E Q D FSFM + +Q+ C +T
Sbjct: 181 TLRELGFKVGRLKTGTPPRIDKRSIDFSKLEVQHGDNPPPAFSFMNKNFLPLQQLPCYLT 240
Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303
TN +TH +I N+ S +YSG I+ GPRYCPSIEDK+VRF ++ HQIFLEPEGLN+D
Sbjct: 241 HTNPKTHDLIRSNLHRSPMYSGVIEGNGPRYCPSIEDKVVRFADKERHQIFLEPEGLNSD 300
Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363
+YPNG+ST+LPE++Q Q +R+IPGLE I+RPGYAIEYD+ +P++L PTLETK I GL
Sbjct: 301 EIYPNGLSTSLPEDVQLQIVRSIPGLENAEILRPGYAIEYDFFDPRQLKPTLETKLIQGL 360
Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423
F AGQINGTTGYEEAAAQGL+AGIN+A K + R+++YIGV+IDDL +KG EP
Sbjct: 361 FFAGQINGTTGYEEAAAQGLMAGINAALKLQNKEPFILKRSEAYIGVLIDDLVTKGTKEP 420
Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483
YRMFTSRAEYR+ LR DNAD RLT IG +LG I + R RF K + LKS L
Sbjct: 421 YRMFTSRAEYRLLLREDNADFRLTEIGRELGLIDDERYARFLKKKENIEEEIQRLKSTWL 480
Query: 484 TS-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538
T + L + S + + + L P+ +++ L + P V+E+++I
Sbjct: 481 TPSKEVKEELKNHLQSPLKRE--ASGEDLLRRPEMNLEKLTKLTPFLPALDEEVLEQVEI 538
Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598
+ Y Y +Q E K++ E IP FDY +P LS E +EKLS +P ++ QAS+I
Sbjct: 539 QIKYEGYIKKQQDEIKKLDRLENVKIPATFDYRKVPGLSTEAREKLSKFRPLSIGQASRI 598
Query: 599 EGMTPAALNLLLIYIKK 615
G+TPA +++LL+Y+KK
Sbjct: 599 SGITPADISILLVYLKK 615