RPSBLAST alignment for GI: 254780808 and conserved domain: TIGR00136

>gnl|CDD|129242 TIGR00136, gidA, glucose-inhibited division protein A. GidA, the longer of two forms of GidA-related proteins, appears to be present in all complete eubacterial genomes so far, as well as Saccharomyces cerevisiae. A subset of these organisms have a closely related protein. GidA is absent in the Archaea. It appears to act with MnmE, in an alpha2/beta2 heterotetramer, in the 5-carboxymethylaminomethyl modification of uridine 34 in certain tRNAs. The shorter, related protein, previously called gid or gidA(S), is now called TrmFO (see model TIGR00137). Length = 617
 Score =  781 bits (2019), Expect = 0.0
 Identities = 316/617 (51%), Positives = 405/617 (65%), Gaps = 9/617 (1%)

Query: 6   YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65
           +DVIVIGGGHAGCEAA  AA++GA T L+T    TIG  SCNPAIGG  KG LV+EIDAL
Sbjct: 1   FDVIVIGGGHAGCEAALAAARMGAKTLLLTLNLDTIGKCSCNPAIGGPAKGILVKEIDAL 60

Query: 66  DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125
            GLMG+ AD AG+QFRVLN  KGPAVR  R Q D+ LYR AM+  + +Q NL + QGEV 
Sbjct: 61  GGLMGKAADKAGLQFRVLNSSKGPAVRATRAQIDKVLYRKAMRNALENQPNLSLFQGEVE 120

Query: 126 GFNTEKN-IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184
               E N  I  +V QD    R   V++TTGTFLRG IHIG     AGR G+ PS  L  
Sbjct: 121 DLILEDNDEIKGVVTQDGLKFRAKAVIITTGTFLRGKIHIGDKSYSAGRAGEQPSIGLST 180

Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDK-ITNRQIECGIT 243
           +  +  F  GRLKTGTP R+D ++I + K E Q  D     FSFM    +  +Q+ C +T
Sbjct: 181 TLRELGFKVGRLKTGTPPRIDKRSIDFSKLEVQHGDNPPPAFSFMNKNFLPLQQLPCYLT 240

Query: 244 RTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTD 303
            TN +TH +I  N+  S +YSG I+  GPRYCPSIEDK+VRF ++  HQIFLEPEGLN+D
Sbjct: 241 HTNPKTHDLIRSNLHRSPMYSGVIEGNGPRYCPSIEDKVVRFADKERHQIFLEPEGLNSD 300

Query: 304 VVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGL 363
            +YPNG+ST+LPE++Q Q +R+IPGLE   I+RPGYAIEYD+ +P++L PTLETK I GL
Sbjct: 301 EIYPNGLSTSLPEDVQLQIVRSIPGLENAEILRPGYAIEYDFFDPRQLKPTLETKLIQGL 360

Query: 364 FLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEP 423
           F AGQINGTTGYEEAAAQGL+AGIN+A K    +     R+++YIGV+IDDL +KG  EP
Sbjct: 361 FFAGQINGTTGYEEAAAQGLMAGINAALKLQNKEPFILKRSEAYIGVLIDDLVTKGTKEP 420

Query: 424 YRMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVL 483
           YRMFTSRAEYR+ LR DNAD RLT IG +LG I + R  RF K  +        LKS  L
Sbjct: 421 YRMFTSRAEYRLLLREDNADFRLTEIGRELGLIDDERYARFLKKKENIEEEIQRLKSTWL 480

Query: 484 TS-----KNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQI 538
           T      + L +   S  +     +  + L  P+ +++ L  + P        V+E+++I
Sbjct: 481 TPSKEVKEELKNHLQSPLKRE--ASGEDLLRRPEMNLEKLTKLTPFLPALDEEVLEQVEI 538

Query: 539 ESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKI 598
           +  Y  Y  +Q  E K++   E   IP  FDY  +P LS E +EKLS  +P ++ QAS+I
Sbjct: 539 QIKYEGYIKKQQDEIKKLDRLENVKIPATFDYRKVPGLSTEAREKLSKFRPLSIGQASRI 598

Query: 599 EGMTPAALNLLLIYIKK 615
            G+TPA +++LL+Y+KK
Sbjct: 599 SGITPADISILLVYLKK 615