RPSBLAST alignment for GI: 254780808 and conserved domain: TIGR00137

>gnl|CDD|129243 TIGR00137, gid_trmFO, tRNA:m(5)U-54 methyltransferase. This model represents an orthologous set of proteins present in relatively few bacteria but very tightly conserved where it occurs. It is closely related to gidA (glucose-inhibited division protein A), which appears to be present in all complete eubacterial genomes so far and in Saccharomyces cerevisiae. It was designated gid but is now recognized as a tRNA:m(5)U-54 methyltransferase and is now designated trmFO. Length = 433
 Score = 46.4 bits (110), Expect = 2e-05
 Identities = 35/130 (26%), Positives = 53/130 (40%), Gaps = 25/130 (19%)

Query: 8   VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGL----G 54
           V VIGGG AG EAA   A+ G    L           H T  +  + C+ ++G       
Sbjct: 3   VHVIGGGLAGSEAAWQLAQAGVPVILYEMRPEKLTPAHHTEDLAELVCSNSLGAKALDRA 62

Query: 55  KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114
            G L  E+  L  L+   AD   +          PA  G     DR ++  ++  ++ S 
Sbjct: 63  AGLLKTEMRQLSSLIITAADRHAV----------PA--GGALAVDRGIFSRSLTEQVASH 110

Query: 115 ENLDVIQGEV 124
            N+ +I+ EV
Sbjct: 111 PNVTLIREEV 120