RPSBLAST alignment for GI: 254780808 and conserved domain: KOG2311

>gnl|CDD|37522 KOG2311, KOG2311, KOG2311, NAD/FAD-utilizing protein possibly involved in translation [Translation, ribosomal structure and biogenesis]. Length = 679
 Score =  707 bits (1826), Expect = 0.0
 Identities = 302/629 (48%), Positives = 419/629 (66%), Gaps = 24/629 (3%)

Query: 6   YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDAL 65
           YDV+VIGGGHAGCEAAA AA+LGA T L+TH   TIG MSCNP+ GG+GKGHL+RE+DAL
Sbjct: 29  YDVVVIGGGHAGCEAAAAAARLGARTLLLTHNLDTIGEMSCNPSFGGIGKGHLMREVDAL 88

Query: 66  DGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVA 125
           DGL  RV D +G+Q++VLN  KGPAV G R Q DR+LY+  MQ+EI S  NL++ +G VA
Sbjct: 89  DGLCSRVCDQSGVQYKVLNRSKGPAVWGLRAQIDRKLYKKNMQKEISSTPNLEIREGAVA 148

Query: 126 GFNTEKN-----IISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSN 180
               E       ++S +V+ D +++   +V+LTTGTFLRG I+IG    PAGR+G+ PS 
Sbjct: 149 DLIVEDPDDGHCVVSGVVLVDGTVVYAESVILTTGTFLRGQINIGLKTHPAGRIGEQPSI 208

Query: 181 SLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKI---TNRQ 237
            L  +  K  F+ GRLKTGTP RL  ++I + K E+Q  DE  IPFSF+ + +      Q
Sbjct: 209 GLSETLQKLGFELGRLKTGTPPRLAKESINFSKLERQIGDEPPIPFSFLNETVWIEPEDQ 268

Query: 238 IECGITRTNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEP 297
           + C +T T    H I+ +N+  +          GPRYCPSIE KI+RF +++ HQI+LEP
Sbjct: 269 LPCYLTHTTPRVHEIVRKNLHENPHVKETTI--GPRYCPSIESKILRFPDKS-HQIWLEP 325

Query: 298 EGLNTDVVYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLET 357
           EGL++D++YP G+S  LPEE+Q Q IR+IPGLE   I++PGY +EYDY++P++L P+LET
Sbjct: 326 EGLDSDLIYPQGLSNTLPEELQLQLIRSIPGLENAEILQPGYGVEYDYVDPRQLKPSLET 385

Query: 358 KKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTS 417
           KK+ GLF AGQINGTTGYEEAAAQG++AGIN++ +++    +  SRT+ YIGV+IDDLT+
Sbjct: 386 KKVQGLFFAGQINGTTGYEEAAAQGIIAGINASLRASGKPPVVVSRTEGYIGVLIDDLTT 445

Query: 418 KGVLEPYRMFTSRAEYRISLRPDNADNRLTPIGMK-LGCIGERRQKRFAKYIQEYNFLRS 476
            G  EPYRMFTSR+E+R+SLRPDNAD+RLTP+G K  G + ++R +RF +     +    
Sbjct: 446 LGTNEPYRMFTSRSEFRLSLRPDNADSRLTPLGYKEGGLVSQQRWERFQETKSRLDEGIK 505

Query: 477 LLKSLVLTSK------NLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSS 530
            LK   L+S+       ++S S       K   A + L + D  +  L    PD  K  +
Sbjct: 506 RLKEFKLSSQKWKKLIPIASIS---TSRSKPVRALDLLKFKDLDLDKLIECHPDPLKNLT 562

Query: 531 L---VIERLQIESSYAAYTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSIL 587
           +   + ERL+IE  Y ++  RQ  E + ++ +E   +P D DY ++  LS E +EKL  +
Sbjct: 563 IPRELAERLKIEGKYESFIVRQQQEKQGVQRDEALQLPDDLDYLTMRTLSLECREKLHRV 622

Query: 588 KPFNLLQASKIEGMTPAALNLLLIYIKKN 616
           +P  +  AS+I+G+TPAA+  LL ++K N
Sbjct: 623 RPQTIGAASRIQGVTPAAIIRLLRHVKTN 651