HHsearch alignment for GI: 254780809 and conserved domain: CHL00071

Probab=98.59  E-value=1.6e-07  Score=72.01  Aligned_cols=110  Identities=16%  Similarity=0.168  Sum_probs=75.8

Q ss_pred             HHHCCCEEEECCCCCCHHHHHHHHHCCH---------------HCCCCCCCCCCEEECCCCCCCCCEEEEEEECCHHCCC
Q ss_conf             3202302431146631888999985520---------------0023454687211000124568358999508100024
Q gi|254780809|r  216 IRNGYKIVILGHSNAGKSSLFNALAKKD---------------VAIVTDIPGTTRDVLTIDLDLEGYLVKISDTAGIRET  280 (440)
Q Consensus       216 l~~g~~v~i~G~pN~GKSSL~N~L~~~~---------------~aIVs~~~GTTRD~i~~~~~i~g~~~~l~DTaGir~t  280 (440)
T Consensus         9 ~k~~vni~~~GHVD~GKSTL~g~L~~~~~~~~~~~~~~~~~~D~~~eEr~rGiTid~~~~~~et~~~~~~~iD~PGH~~f   88 (409)
T CHL00071          9 KKPHVNIGTIGHVDHGKTTLTAAITMTLAANGGAKGKKYDEIDSAPEEKARGITINTAHVEYETENRHYAHVDCPGHADY   88 (409)
T ss_pred             CCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHCCCEEEECEEEEECCCEEEEEEECCCHHHH
T ss_conf             99869999995458839999999864530045133431553237976873694488024899628759999867967899


Q ss_pred             CHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHH--------HHHHCCCCC-CCCCCCCCCCC
Q ss_conf             103566667888998503011020135898566--------343128985-32222333446
Q gi|254780809|r  281 DDIVEKEGIKRTFLEVENADLILLLKEINSKKE--------ISFPKNIDF-IFIGTKSDLYS  333 (440)
Q Consensus       281 ~d~IE~~GI~ra~~~i~~aDlil~v~D~~~~~~--------~~~~~~~~~-i~V~NK~Dl~~  333 (440)
T Consensus        89 --------v~nmi~Gas~aD~alLVV~A~~G~~~QTkEHl~l~~~lgV~~~IVavnKmD~v~  142 (409)
T CHL00071         89 --------VKNMITGAAQMDGAILVVSAADGPMPQTKEHILLAKQVGVPNIVVFLNKEDQVD  142 (409)
T ss_pred             --------HHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCC
T ss_conf             --------999875230158128999868788500499999999739993655555679854