HHsearch alignment for GI: 254780809 and conserved domain: COG0218

Probab=99.65  E-value=5.8e-16  Score=130.56  Aligned_cols=144  Identities=28%  Similarity=0.326  Sum_probs=99.4

Q ss_pred             HCCCEEEECCCCCCHHHHHHHHHCCH-HCCCCCCCCCCEEECCCCCCCCCEEEEEEECCHHCCCCHHH-HHHHHHHH-HH
Q ss_conf             02302431146631888999985520-00234546872110001245683589995081000241035-66667888-99
Q gi|254780809|r  218 NGYKIVILGHSNAGKSSLFNALAKKD-VAIVTDIPGTTRDVLTIDLDLEGYLVKISDTAGIRETDDIV-EKEGIKRT-FL  294 (440)
Q Consensus       218 ~g~~v~i~G~pN~GKSSL~N~L~~~~-~aIVs~~~GTTRD~i~~~~~i~g~~~~l~DTaGir~t~d~I-E~~GI~ra-~~  294 (440)
T Consensus        23 ~~~EIaF~GRSNVGKSSlIN~l~~~k~LArtSktPGrTq~iNf--f~~~~-~~~lVDlPGYGyAkv~k~~~e~w~~~i~~   99 (200)
T COG0218          23 DLPEIAFAGRSNVGKSSLINALTNQKNLARTSKTPGRTQLINF--FEVDD-ELRLVDLPGYGYAKVPKEVKEKWKKLIEE   99 (200)
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHCCCCEEECCCCCCCCCEEEE--EEECC-CEEEEECCCCCCCCCCHHHHHHHHHHHHH
T ss_conf             8967999816866689999999678635565799985423679--98358-57998179954032899999999999999


Q ss_pred             HHH---HHCCEEECCCCCCHH------HHHH--HCCCCCCCCCCCCCCCCCCCH----------------HH--HHHHHH
Q ss_conf             850---301102013589856------6343--128985322223334465420----------------00--001333
Q gi|254780809|r  295 EVE---NADLILLLKEINSKK------EISF--PKNIDFIFIGTKSDLYSTYTE----------------EY--DHLISS  345 (440)
Q Consensus       295 ~i~---~aDlil~v~D~~~~~------~~~~--~~~~~~i~V~NK~Dl~~~~~~----------------~~--~~~ISa  345 (440)
T Consensus       100 YL~~R~~L~~vvlliD~r~~~~~~D~em~~~l~~~~i~~~vv~tK~DKi~~~~~~k~l~~v~~~l~~~~~~~~~~~~~ss  179 (200)
T COG0218         100 YLEKRANLKGVVLLIDARHPPKDLDREMIEFLLELGIPVIVVLTKADKLKKSERNKQLNKVAEELKKPPPDDQWVVLFSS  179 (200)
T ss_pred             HHHHCHHHEEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEC
T ss_conf             99635222489999978999868799999999975998699997110377467888999999984689886643999865


Q ss_pred             HHHHHHHHHHHHHHHHHHH
Q ss_conf             3232358999999999632
Q gi|254780809|r  346 FTGEGLEELINKIKSILSN  364 (440)
Q Consensus       346 ktg~Gi~~L~~~I~~~l~~  364 (440)
T Consensus       180 ~~k~Gi~~l~~~i~~~~~~  198 (200)
T COG0218         180 LKKKGIDELKAKILEWLKE  198 (200)
T ss_pred             CCCCCHHHHHHHHHHHHHC
T ss_conf             4544899999999998640