HHsearch alignment for GI: 254780809 and conserved domain: COG0486

>COG0486 ThdF Predicted GTPase [General function prediction only].
Probab=100.00  E-value=0  Score=1036.82  Aligned_cols=435  Identities=42%  Similarity=0.625  Sum_probs=410.9

Q ss_pred             CCCCEEEECCCCCCCCEEEEECCCHHHHHHHHHHHCC-CCCCCCEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCEEE
Q ss_conf             8782989846886761699972738899999987166-888875389988754898672069999956779988775399
Q gi|254780809|r    4 EKETIFAVSTGALPSAISIIRLSGPSCFQVCEFICKK-KKPFPRKASLRYFFGLDGRILDKGLLIVFPSPESFTGEDSAE   82 (440)
Q Consensus         4 ~~dTI~A~aTp~g~~aiaviRiSG~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~iD~~l~~~f~~P~SyTGEDvvE   82 (440)
T Consensus         3 ~~dTI~AiaTa~g~~aI~IvRiSGp~a~~ia~~i~~~~~~~~~r~a~y~~i~d~~~~~iDe~lvl~f~aP~SFTGEDvvE   82 (454)
T COG0486           3 MFDTIAAIATAPGEGAIGIVRISGPDALEIAQKLFGGLKLPKPRTAHYGHIKDENGEIIDEVLVLYFKAPNSFTGEDVVE   82 (454)
T ss_pred             CCCCEEEECCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCEEEEEEEEEEECCCCCCCCCEEE
T ss_conf             77857998248878538999902774999999984777778871899998986997575225378870898746664799


Q ss_pred             EEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
Q ss_conf             98089878899999987544320000003689978752156777777889885003688999887531431024566567
Q gi|254780809|r   83 FHVHGGIAVVNGILEELAKMPNLRLANPGEFSRRAFENGKIDLLEAESLADLISSETEMQRRLSMEGMSGELSSLYGQWI  162 (440)
Q Consensus        83 i~~HG~~~i~~~il~~l~~~~g~r~A~pGEFT~RAflNgKidL~qaEai~~LI~A~t~~~~~~a~~~l~G~ls~~i~~lr  162 (440)
T Consensus        83 i~~HGg~~v~~~iL~~~l~~-GaR~AepGEFs~RAFLNgK~DLtqAEai~dLI~A~te~a~r~A~~~l~G~ls~~i~~lr  161 (454)
T COG0486          83 IQCHGGPVVVNLILELLLKL-GARLAEPGEFSKRAFLNGKLDLTQAEAIADLIDAKTEQAARIALRQLQGALSQLINELR  161 (454)
T ss_pred             EECCCCHHHHHHHHHHHHHC-CCEECCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf             97679899999999999974-98343888536888865884689998899998388899999999975773889999999


Q ss_pred             HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCC
Q ss_conf             76998886544431135443112332588886401000112123332234554320230243114663188899998552
Q gi|254780809|r  163 DKLTHIRSFIEADLDFSEEEDVQNFSSKEVLNDILFLKNDISSHISQGKLGEIIRNGYKIVILGHSNAGKSSLFNALAKK  242 (440)
Q Consensus       163 ~~L~~~~a~iEa~IDF~dEedi~~~~~~~~~~~i~~i~~~l~~ll~~~~~~~~l~~g~~v~i~G~pN~GKSSL~N~L~~~  242 (440)
T Consensus       162 ~~li~~~a~vEa~IDfpee-di~~~~~~~i~~~l~~~~~~l~~ll~~~~~g~ilr~G~kvvIiG~PNvGKSSLLNaL~~~  240 (454)
T COG0486         162 EALLELLAQVEANIDFPEE-DIEELVLEKIREKLEELIAELDELLATAKQGKILREGLKVVIIGRPNVGKSSLLNALLGR  240 (454)
T ss_pred             HHHHHHHHHHEEECCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCC
T ss_conf             9999999884486777754-566014789999999999999999974442136645864999879988679999988667


Q ss_pred             HHCCCCCCCCCCEEECCCCCCCCCEEEEEEECCHHCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCH---H---HHH-
Q ss_conf             000234546872110001245683589995081000241035666678889985030110201358985---6---634-
Q gi|254780809|r  243 DVAIVTDIPGTTRDVLTIDLDLEGYLVKISDTAGIRETDDIVEKEGIKRTFLEVENADLILLLKEINSK---K---EIS-  315 (440)
Q Consensus       243 ~~aIVs~~~GTTRD~i~~~~~i~g~~~~l~DTaGir~t~d~IE~~GI~ra~~~i~~aDlil~v~D~~~~---~---~~~-  315 (440)
T Consensus       241 d~AIVTdI~GTTRDviee~i~i~G~pv~l~DTAGiRet~d~VE~iGIeRs~~~i~~ADlvL~v~D~~~~~~~~d~~~~~~  320 (454)
T COG0486         241 DRAIVTDIAGTTRDVIEEDINLNGIPVRLVDTAGIRETDDVVERIGIERAKKAIEEADLVLFVLDASQPLDKEDLALIEL  320 (454)
T ss_pred             CCEEECCCCCCCCCEEEEEEEECCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHH
T ss_conf             86674289997410378999989889999856776667348999999999999985998999970887776011778872


Q ss_pred             HHCCCCCCCCCCCCCCCCCCCH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHH
Q ss_conf             3128985322223334465420--------00001333323235899999999963220358863201489999999999
Q gi|254780809|r  316 FPKNIDFIFIGTKSDLYSTYTE--------EYDHLISSFTGEGLEELINKIKSILSNKFKKLPFSIPSHKRHLYHLSQTV  387 (440)
Q Consensus       316 ~~~~~~~i~V~NK~Dl~~~~~~--------~~~~~ISaktg~Gi~~L~~~I~~~l~~~~~~~~~~i~~~~Rq~~~L~~a~  387 (440)
T Consensus       321 ~~~~~~~i~v~NK~DL~~~~~~~~~~~~~~~~~i~iSa~t~~Gl~~L~~~i~~~~~~~~~~~~~~~i~~~Rh~~~L~~a~  400 (454)
T COG0486         321 LPKKKPIIVVLNKADLVSKIELESEKLANGDAIISISAKTGEGLDALREAIKQLFGKGLGNQEGLFLSNLRHIQLLEQAA  400 (454)
T ss_pred             CCCCCCEEEEEECHHCCCCCCCCHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHH
T ss_conf             43689779999602115643210120267882699982576579999999999986301565420220399999999999


Q ss_pred             HHHHHHHHHCC-CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC
Q ss_conf             99999975327-998014659999999863567185311587416765057899
Q gi|254780809|r  388 RYLEMASLNEK-DCGLDIIAENLRLASVSLGKITGCVDVEQLLDIIFSKFCIGK  440 (440)
Q Consensus       388 ~~L~~~~~~~~-~~~~EliAeeLr~A~~~L~eItG~~~~EdiLd~IFs~FCIGK  440 (440)
T Consensus       401 ~~l~~a~~~~~~~~~~dl~a~dLr~A~~~LgeItG~~~~edlLd~IFs~FCiGK  454 (454)
T COG0486         401 EHLEDALQQLELGQPLDLLAEDLRLAQEALGEITGEFVSEDLLDEIFSNFCIGK  454 (454)
T ss_pred             HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC
T ss_conf             999999862431698144599999999999887587866888999987516799