HHsearch alignment for GI: 254780809 and conserved domain: COG0486
>COG0486 ThdF Predicted GTPase [General function prediction only].
Probab=100.00 E-value=0 Score=1036.82 Aligned_cols=435 Identities=42% Similarity=0.625 Sum_probs=410.9
Q ss_pred CCCCEEEECCCCCCCCEEEEECCCHHHHHHHHHHHCC-CCCCCCEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCEEE
Q ss_conf 8782989846886761699972738899999987166-888875389988754898672069999956779988775399
Q gi|254780809|r 4 EKETIFAVSTGALPSAISIIRLSGPSCFQVCEFICKK-KKPFPRKASLRYFFGLDGRILDKGLLIVFPSPESFTGEDSAE 82 (440)
Q Consensus 4 ~~dTI~A~aTp~g~~aiaviRiSG~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~iD~~l~~~f~~P~SyTGEDvvE 82 (440)
T Consensus 3 ~~dTI~AiaTa~g~~aI~IvRiSGp~a~~ia~~i~~~~~~~~~r~a~y~~i~d~~~~~iDe~lvl~f~aP~SFTGEDvvE 82 (454)
T COG0486 3 MFDTIAAIATAPGEGAIGIVRISGPDALEIAQKLFGGLKLPKPRTAHYGHIKDENGEIIDEVLVLYFKAPNSFTGEDVVE 82 (454)
T ss_pred CCCCEEEECCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCEEEEEEEEEEECCCCCCCCCEEE
T ss_conf 77857998248878538999902774999999984777778871899998986997575225378870898746664799
Q ss_pred EEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
Q ss_conf 98089878899999987544320000003689978752156777777889885003688999887531431024566567
Q gi|254780809|r 83 FHVHGGIAVVNGILEELAKMPNLRLANPGEFSRRAFENGKIDLLEAESLADLISSETEMQRRLSMEGMSGELSSLYGQWI 162 (440)
Q Consensus 83 i~~HG~~~i~~~il~~l~~~~g~r~A~pGEFT~RAflNgKidL~qaEai~~LI~A~t~~~~~~a~~~l~G~ls~~i~~lr 162 (440)
T Consensus 83 i~~HGg~~v~~~iL~~~l~~-GaR~AepGEFs~RAFLNgK~DLtqAEai~dLI~A~te~a~r~A~~~l~G~ls~~i~~lr 161 (454)
T COG0486 83 IQCHGGPVVVNLILELLLKL-GARLAEPGEFSKRAFLNGKLDLTQAEAIADLIDAKTEQAARIALRQLQGALSQLINELR 161 (454)
T ss_pred EECCCCHHHHHHHHHHHHHC-CCEECCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 97679899999999999974-98343888536888865884689998899998388899999999975773889999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCC
Q ss_conf 76998886544431135443112332588886401000112123332234554320230243114663188899998552
Q gi|254780809|r 163 DKLTHIRSFIEADLDFSEEEDVQNFSSKEVLNDILFLKNDISSHISQGKLGEIIRNGYKIVILGHSNAGKSSLFNALAKK 242 (440)
Q Consensus 163 ~~L~~~~a~iEa~IDF~dEedi~~~~~~~~~~~i~~i~~~l~~ll~~~~~~~~l~~g~~v~i~G~pN~GKSSL~N~L~~~ 242 (440)
T Consensus 162 ~~li~~~a~vEa~IDfpee-di~~~~~~~i~~~l~~~~~~l~~ll~~~~~g~ilr~G~kvvIiG~PNvGKSSLLNaL~~~ 240 (454)
T COG0486 162 EALLELLAQVEANIDFPEE-DIEELVLEKIREKLEELIAELDELLATAKQGKILREGLKVVIIGRPNVGKSSLLNALLGR 240 (454)
T ss_pred HHHHHHHHHHEEECCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCC
T ss_conf 9999999884486777754-566014789999999999999999974442136645864999879988679999988667
Q ss_pred HHCCCCCCCCCCEEECCCCCCCCCEEEEEEECCHHCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCH---H---HHH-
Q ss_conf 000234546872110001245683589995081000241035666678889985030110201358985---6---634-
Q gi|254780809|r 243 DVAIVTDIPGTTRDVLTIDLDLEGYLVKISDTAGIRETDDIVEKEGIKRTFLEVENADLILLLKEINSK---K---EIS- 315 (440)
Q Consensus 243 ~~aIVs~~~GTTRD~i~~~~~i~g~~~~l~DTaGir~t~d~IE~~GI~ra~~~i~~aDlil~v~D~~~~---~---~~~- 315 (440)
T Consensus 241 d~AIVTdI~GTTRDviee~i~i~G~pv~l~DTAGiRet~d~VE~iGIeRs~~~i~~ADlvL~v~D~~~~~~~~d~~~~~~ 320 (454)
T COG0486 241 DRAIVTDIAGTTRDVIEEDINLNGIPVRLVDTAGIRETDDVVERIGIERAKKAIEEADLVLFVLDASQPLDKEDLALIEL 320 (454)
T ss_pred CCEEECCCCCCCCCEEEEEEEECCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHH
T ss_conf 86674289997410378999989889999856776667348999999999999985998999970887776011778872
Q ss_pred HHCCCCCCCCCCCCCCCCCCCH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHH
Q ss_conf 3128985322223334465420--------00001333323235899999999963220358863201489999999999
Q gi|254780809|r 316 FPKNIDFIFIGTKSDLYSTYTE--------EYDHLISSFTGEGLEELINKIKSILSNKFKKLPFSIPSHKRHLYHLSQTV 387 (440)
Q Consensus 316 ~~~~~~~i~V~NK~Dl~~~~~~--------~~~~~ISaktg~Gi~~L~~~I~~~l~~~~~~~~~~i~~~~Rq~~~L~~a~ 387 (440)
T Consensus 321 ~~~~~~~i~v~NK~DL~~~~~~~~~~~~~~~~~i~iSa~t~~Gl~~L~~~i~~~~~~~~~~~~~~~i~~~Rh~~~L~~a~ 400 (454)
T COG0486 321 LPKKKPIIVVLNKADLVSKIELESEKLANGDAIISISAKTGEGLDALREAIKQLFGKGLGNQEGLFLSNLRHIQLLEQAA 400 (454)
T ss_pred CCCCCCEEEEEECHHCCCCCCCCHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHH
T ss_conf 43689779999602115643210120267882699982576579999999999986301565420220399999999999
Q ss_pred HHHHHHHHHCC-CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC
Q ss_conf 99999975327-998014659999999863567185311587416765057899
Q gi|254780809|r 388 RYLEMASLNEK-DCGLDIIAENLRLASVSLGKITGCVDVEQLLDIIFSKFCIGK 440 (440)
Q Consensus 388 ~~L~~~~~~~~-~~~~EliAeeLr~A~~~L~eItG~~~~EdiLd~IFs~FCIGK 440 (440)
T Consensus 401 ~~l~~a~~~~~~~~~~dl~a~dLr~A~~~LgeItG~~~~edlLd~IFs~FCiGK 454 (454)
T COG0486 401 EHLEDALQQLELGQPLDLLAEDLRLAQEALGEITGEFVSEDLLDEIFSNFCIGK 454 (454)
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC
T ss_conf 999999862431698144599999999999887587866888999987516799