HHsearch alignment for GI: 254780809 and conserved domain: COG1159
>COG1159 Era GTPase [General function prediction only].
Probab=99.95 E-value=1.9e-28 Score=217.25 Aligned_cols=159 Identities=25% Similarity=0.323 Sum_probs=131.8
Q ss_pred HHHCCCEEEECCCCCCHHHHHHHHHCCHHCCCCCCCCCCEEECCCCCCCCCEEEEEEECCHHCCCCHHHHHHHHHHHHHH
Q ss_conf 32023024311466318889999855200023454687211000124568358999508100024103566667888998
Q gi|254780809|r 216 IRNGYKIVILGHSNAGKSSLFNALAKKDVAIVTDIPGTTRDVLTIDLDLEGYLVKISDTAGIRETDDIVEKEGIKRTFLE 295 (440)
Q Consensus 216 l~~g~~v~i~G~pN~GKSSL~N~L~~~~~aIVs~~~GTTRD~i~~~~~i~g~~~~l~DTaGir~t~d~IE~~GI~ra~~~ 295 (440)
T Consensus 4 ~ksGf-VaIiGrPNvGKSTLlN~l~G~KisIvS~k~QTTR~~I~GI~t~~~~QiIfvDTPGih~pk~~l~~~m~~~a~~s 82 (298)
T COG1159 4 FKSGF-VAIIGRPNVGKSTLLNALVGQKISIVSPKPQTTRNRIRGIVTTDNAQIIFVDTPGIHKPKHALGELMNKAARSA 82 (298)
T ss_pred CEEEE-EEEECCCCCCHHHHHHHHHCCCEEEECCCCCHHHHHEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHH
T ss_conf 36899-99986998768999989856825751598531144214799869844999848988876517889999999987
Q ss_pred HHHHCCEEECCCCCCHH------HHHHHC--CCCCCCCCCCCCCCCCCCH--------------HHHHHHHHHHHHHHHH
Q ss_conf 50301102013589856------634312--8985322223334465420--------------0000133332323589
Q gi|254780809|r 296 VENADLILLLKEINSKK------EISFPK--NIDFIFIGTKSDLYSTYTE--------------EYDHLISSFTGEGLEE 353 (440)
Q Consensus 296 i~~aDlil~v~D~~~~~------~~~~~~--~~~~i~V~NK~Dl~~~~~~--------------~~~~~ISaktg~Gi~~ 353 (440)
T Consensus 83 l~dvDlilfvvd~~~~~~~~d~~il~~lk~~~~pvil~iNKID~~~~~~~l~~~~~~~~~~~~f~~ivpiSA~~g~n~~~ 162 (298)
T COG1159 83 LKDVDLILFVVDADEGWGPGDEFILEQLKKTKTPVILVVNKIDKVKPKTVLLKLIAFLKKLLPFKEIVPISALKGDNVDT 162 (298)
T ss_pred HCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHH
T ss_conf 24575999998666568910799999776438986999984025784778999999998508830179951015678899
Q ss_pred HHHHHHHHHHHHCCCCCCCEEH
Q ss_conf 9999999963220358863201
Q gi|254780809|r 354 LINKIKSILSNKFKKLPFSIPS 375 (440)
Q Consensus 354 L~~~I~~~l~~~~~~~~~~i~~ 375 (440)
T Consensus 163 L~~~i~~~Lpeg~~~yp~d~it 184 (298)
T COG1159 163 LLEIIKEYLPEGPWYYPEDQIT 184 (298)
T ss_pred HHHHHHHHCCCCCCCCCHHHCC
T ss_conf 9999998588888848856515