HHsearch alignment for GI: 254780809 and conserved domain: COG1160
>COG1160 Predicted GTPases [General function prediction only].
Probab=99.97 E-value=2.2e-31 Score=237.60 Aligned_cols=143 Identities=28% Similarity=0.414 Sum_probs=124.2
Q ss_pred CCEEEECCCCCCHHHHHHHHHCCHHCCCCCCCCCCEEECCCCCCCCCEEEEEEECCHHCC-CCHHHHHHHHHHHHHHHHH
Q ss_conf 302431146631888999985520002345468721100012456835899950810002-4103566667888998503
Q gi|254780809|r 220 YKIVILGHSNAGKSSLFNALAKKDVAIVTDIPGTTRDVLTIDLDLEGYLVKISDTAGIRE-TDDIVEKEGIKRTFLEVEN 298 (440)
Q Consensus 220 ~~v~i~G~pN~GKSSL~N~L~~~~~aIVs~~~GTTRD~i~~~~~i~g~~~~l~DTaGir~-t~d~IE~~GI~ra~~~i~~ 298 (440)
T Consensus 4 ~~VAIVGRPNVGKSTLFNRL~g~r~AIV~D~pGvTRDr~y~~~~~~~~~f~lIDTgGl~~~~~~~l~~~i~~Qa~~Ai~e 83 (444)
T COG1160 4 PVVAIVGRPNVGKSTLFNRLTGRRIAIVSDTPGVTRDRIYGDAEWLGREFILIDTGGLDDGDEDELQELIREQALIAIEE 83 (444)
T ss_pred CEEEEECCCCCCHHHHHHHHHCCEEEEEECCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 78999899987589999887577026760699975577545069838607999789977688128999999999999976
Q ss_pred HCCEEECCCCCC---HHH-----HHHHCCCCCCCCCCCCCCCCCCCHH---------HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 011020135898---566-----3431289853222233344654200---------00013333232358999999999
Q gi|254780809|r 299 ADLILLLKEINS---KKE-----ISFPKNIDFIFIGTKSDLYSTYTEE---------YDHLISSFTGEGLEELINKIKSI 361 (440)
Q Consensus 299 aDlil~v~D~~~---~~~-----~~~~~~~~~i~V~NK~Dl~~~~~~~---------~~~~ISaktg~Gi~~L~~~I~~~ 361 (440)
T Consensus 84 ADvilfvVD~~~Git~~D~~ia~~Lr~~~kpviLvvNK~D~~~~e~~~~efyslG~g~~~~ISA~Hg~Gi~dLld~v~~~ 163 (444)
T COG1160 84 ADVILFVVDGREGITPADEEIAKILRRSKKPVILVVNKIDNLKAEELAYEFYSLGFGEPVPISAEHGRGIGDLLDAVLEL 163 (444)
T ss_pred CCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEHHHCCCHHHHHHHHHHH
T ss_conf 79999998488789978999999998539988999976667304564899986478982684255356989999999975
Q ss_pred H
Q ss_conf 6
Q gi|254780809|r 362 L 362 (440)
Q Consensus 362 l 362 (440)
T Consensus 164 l 164 (444)
T COG1160 164 L 164 (444)
T ss_pred C
T ss_conf 6