HHsearch alignment for GI: 254780809 and conserved domain: COG1162

Probab=98.50  E-value=3.1e-07  Score=69.97  Aligned_cols=78  Identities=35%  Similarity=0.390  Sum_probs=53.8

Q ss_pred             CCCEEEECCCCCCHHHHHHHHHCCHHCCCCCCC-------CCCEEECCCCCCCCCEEEEEEECCHHCCCC-HHHHHHHHH
Q ss_conf             230243114663188899998552000234546-------872110001245683589995081000241-035666678
Q gi|254780809|r  219 GYKIVILGHSNAGKSSLFNALAKKDVAIVTDIP-------GTTRDVLTIDLDLEGYLVKISDTAGIRETD-DIVEKEGIK  290 (440)
Q Consensus       219 g~~v~i~G~pN~GKSSL~N~L~~~~~aIVs~~~-------GTTRD~i~~~~~i~g~~~~l~DTaGir~t~-d~IE~~GI~  290 (440)
T Consensus       164 ~~~svl~GqSGVGKSSLiN~L~p~~~~~t~eIS~~~~rGkHTTt~~~l~~l~~gG---~iiDTPGf~~~~l~~~~~e~l~  240 (301)
T COG1162         164 GKITVLLGQSGVGKSTLINALLPELNQKTGEISEKLGRGRHTTTHVELFPLPGGG---WIIDTPGFRSLGLAHLEPEDLV  240 (301)
T ss_pred             CCEEEEECCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCC---EEEECCCCCCCCCCCCCHHHHH
T ss_conf             8849998888776999887417212113442104478988763248999838998---8972899771474567999999


Q ss_pred             HHHHHHHHH
Q ss_conf             889985030
Q gi|254780809|r  291 RTFLEVENA  299 (440)
Q Consensus       291 ra~~~i~~a  299 (440)
T Consensus       241 ~~F~ef~~~  249 (301)
T COG1162         241 QAFPEFAEL  249 (301)
T ss_pred             HHHHHHHHH
T ss_conf             976999987