HHsearch alignment for GI: 254780809 and conserved domain: COG1163
>COG1163 DRG Predicted GTPase [General function prediction only].
Probab=99.72 E-value=4.8e-18 Score=145.04 Aligned_cols=142 Identities=25% Similarity=0.349 Sum_probs=109.7
Q ss_pred HHC-CCEEEECCCCCCHHHHHHHHHCCHHCCCCCCCCCCEEECCCCCCCCCEEEEEEECCHHCCCCHHHHHHHH---HHH
Q ss_conf 202-3024311466318889999855200023454687211000124568358999508100024103566667---888
Q gi|254780809|r 217 RNG-YKIVILGHSNAGKSSLFNALAKKDVAIVTDIPGTTRDVLTIDLDLEGYLVKISDTAGIRETDDIVEKEGI---KRT 292 (440)
Q Consensus 217 ~~g-~~v~i~G~pN~GKSSL~N~L~~~~~aIVs~~~GTTRD~i~~~~~i~g~~~~l~DTaGir~t~d~IE~~GI---~ra 292 (440)
T Consensus 60 KsGda~v~lVGfPsvGKStLL~~LTnt~s-eva~y~FTTl~~vPG~l~Y~ga~IQild~Pgii~gas----~g~grG~~v 134 (365)
T COG1163 60 KSGDATVALVGFPSVGKSTLLNKLTNTKS-EVADYPFTTLEPVPGMLEYKGAQIQLLDLPGIIEGAS----SGRGRGRQV 134 (365)
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHCCCC-CCCCCCCEECCCCCCEEEECCCEEEEECCCCCCCCCC----CCCCCCCEE
T ss_conf 25773899976887458999988768876-4345674102445744754781699972763125765----688876465
Q ss_pred HHHHHHHCCEEECCCCCCHHH-HHH-------------------------------------------------------
Q ss_conf 998503011020135898566-343-------------------------------------------------------
Q gi|254780809|r 293 FLEVENADLILLLKEINSKKE-ISF------------------------------------------------------- 316 (440)
Q Consensus 293 ~~~i~~aDlil~v~D~~~~~~-~~~------------------------------------------------------- 316 (440)
T Consensus 135 ls~~R~ADlIiiVld~~~~~~~~~~i~~ELe~~GIrlnk~~p~V~I~kk~~gGI~i~~t~~l~~~d~~~ir~iL~Ey~I~ 214 (365)
T COG1163 135 LSVARNADLIIIVLDVFEDPHHRDIIERELEDVGIRLNKRPPDVTIKKKESGGIRINGTGPLTHLDEDTVRAILREYRIH 214 (365)
T ss_pred EEEECCCCEEEEEEECCCCHHHHHHHHHHHHHCCEEECCCCCCEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHCCC
T ss_conf 46521588899997168882488999999985676821799965999952598798045456668999999999972836
Q ss_pred ----------------------HCCCCCCCCCCCCCCCCCCCH------HHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf ----------------------128985322223334465420------00001333323235899999999963
Q gi|254780809|r 317 ----------------------PKNIDFIFIGTKSDLYSTYTE------EYDHLISSFTGEGLEELINKIKSILS 363 (440)
Q Consensus 317 ----------------------~~~~~~i~V~NK~Dl~~~~~~------~~~~~ISaktg~Gi~~L~~~I~~~l~ 363 (440)
T Consensus 215 nA~V~Ir~dvTlDd~id~l~~nrvY~p~l~v~NKiD~~~~e~~~~l~~~~~~v~isa~~~~nld~L~e~i~~~L~ 289 (365)
T COG1163 215 NADVLIREDVTLDDLIDALEGNRVYKPALYVVNKIDLPGLEELERLARKPNSVPISAKKGINLDELKERIWDVLG 289 (365)
T ss_pred CEEEEEECCCCHHHHHHHHHHCCEEEEEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 306999468868999999841621323689995255668788999973456289865568798899999998748