HHsearch alignment for GI: 254780809 and conserved domain: COG1419

Probab=96.82  E-value=0.0072  Score=39.68  Aligned_cols=116  Identities=25%  Similarity=0.237  Sum_probs=57.1

Q ss_pred             HCCCEEEECCCCCCHHHHHHHHHCCH--------HCCCC-C---------------CCC-------CCEEECCCCCCCCC
Q ss_conf             02302431146631888999985520--------00234-5---------------468-------72110001245683
Q gi|254780809|r  218 NGYKIVILGHSNAGKSSLFNALAKKD--------VAIVT-D---------------IPG-------TTRDVLTIDLDLEG  266 (440)
Q Consensus       218 ~g~~v~i~G~pN~GKSSL~N~L~~~~--------~aIVs-~---------------~~G-------TTRD~i~~~~~i~g  266 (440)
T Consensus       202 ~~~vi~LVGPTGVGKTTTlAKLAar~~~~~~~~kVaiITtDtYRIGA~EQLk~Ya~im~vp~~vv~~~~el~~ai~~l~~  281 (407)
T COG1419         202 QKRVIALVGPTGVGKTTTLAKLAARYVMLKKKKKVAIITTDTYRIGAVEQLKTYADIMGVPLEVVYSPKELAEAIEALRD  281 (407)
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHC
T ss_conf             68579998998875887999999999753257606899714411528999999999869955996399999999998531


Q ss_pred             EEEEEEECCHHCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCHH-H----HHHHCCCCC-CCCCCCCCCCCCC
Q ss_conf             5899950810002410356666788899850301102013589856-6----343128985-3222233344654
Q gi|254780809|r  267 YLVKISDTAGIRETDDIVEKEGIKRTFLEVENADLILLLKEINSKK-E----ISFPKNIDF-IFIGTKSDLYSTY  335 (440)
Q Consensus       267 ~~~~l~DTaGir~t~d~IE~~GI~ra~~~i~~aDlil~v~D~~~~~-~----~~~~~~~~~-i~V~NK~Dl~~~~  335 (440)
T Consensus       282 ~d~ILVDTaGr-s~~D~~~i~el~~~~~~~-~~i~~~Lvlsat~K~~dlkei~~~f~~~~i~~~I~TKlDET~s~  354 (407)
T COG1419         282 CDVILVDTAGR-SQYDKEKIEELKELIDVS-HSIEVYLVLSATTKYEDLKEIIKQFSLFPIDGLIFTKLDETTSL  354 (407)
T ss_pred             CCEEEEECCCC-CCCCHHHHHHHHHHHHCC-CCCEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCH
T ss_conf             88899968998-833789999999997035-66217999845764688999999724588661689713356763