HHsearch alignment for GI: 254780809 and conserved domain: COG3276
>COG3276 SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis].
Probab=98.47 E-value=5.3e-07 Score=68.38 Aligned_cols=135 Identities=24% Similarity=0.234 Sum_probs=89.9
Q ss_pred CEEEECCCCCCHHHHHHHHHCCHHCCCC--CCCCCCEEECCCCCCCCCEEEEEEECCHHCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 0243114663188899998552000234--54687211000124568358999508100024103566667888998503
Q gi|254780809|r 221 KIVILGHSNAGKSSLFNALAKKDVAIVT--DIPGTTRDVLTIDLDLEGYLVKISDTAGIRETDDIVEKEGIKRTFLEVEN 298 (440)
Q Consensus 221 ~v~i~G~pN~GKSSL~N~L~~~~~aIVs--~~~GTTRD~i~~~~~i~g~~~~l~DTaGir~t~d~IE~~GI~ra~~~i~~ 298 (440)
T Consensus 2 ii~t~GhidHgkT~L~~altg~~~d~l~EekKRG~TiDlg~~y~~~~d~~~~fIDvpgh~~---~-----i~~miag~~~ 73 (447)
T COG3276 2 IIGTAGHIDHGKTTLLKALTGGVTDRLPEEKKRGITIDLGFYYRKLEDGVMGFIDVPGHPD---F-----ISNLLAGLGG 73 (447)
T ss_pred EEEEEEEEECCCHHHHHHHCCCCCCCCHHHHHCCCEEEEEEEECCCCCCCEEEEECCCCHH---H-----HHHHHHHHCC
T ss_conf 6997400201430223330255332054566158468420573257777368861898478---8-----9999854057
Q ss_pred HCCEEECCCCCCHH---------HHHHHCCCCCCCCCCCCCCCCCCC---------------HHHHHHHHHHHHHHHHHH
Q ss_conf 01102013589856---------634312898532222333446542---------------000001333323235899
Q gi|254780809|r 299 ADLILLLKEINSKK---------EISFPKNIDFIFIGTKSDLYSTYT---------------EEYDHLISSFTGEGLEEL 354 (440)
Q Consensus 299 aDlil~v~D~~~~~---------~~~~~~~~~~i~V~NK~Dl~~~~~---------------~~~~~~ISaktg~Gi~~L 354 (440)
T Consensus 74 ~d~alLvV~~deGl~~qtgEhL~iLdllgi~~giivltk~D~~d~~r~e~~i~~Il~~l~l~~~~i~~~s~~~g~Gi~~L 153 (447)
T COG3276 74 IDYALLVVAADEGLMAQTGEHLLILDLLGIKNGIIVLTKADRVDEARIEQKIKQILADLSLANAKIFKTSAKTGRGIEEL 153 (447)
T ss_pred CCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 74589998475576643688999998619873289996223446788999999998650200032301101257877999
Q ss_pred HHHHHHHHH
Q ss_conf 999999963
Q gi|254780809|r 355 INKIKSILS 363 (440)
Q Consensus 355 ~~~I~~~l~ 363 (440)
T Consensus 154 k~~l~~L~~ 162 (447)
T COG3276 154 KNELIDLLE 162 (447)
T ss_pred HHHHHHHHH
T ss_conf 999987520