HHsearch alignment for GI: 254780809 and conserved domain: PRK00049

Probab=98.70  E-value=7.1e-08  Score=74.42  Aligned_cols=109  Identities=18%  Similarity=0.247  Sum_probs=75.0

Q ss_pred             HHCCCEEEECCCCCCHHHHHHHHHCC----------------HHCCCCCCCCCCEEECCCCCCCCCEEEEEEECCHHCCC
Q ss_conf             20230243114663188899998552----------------00023454687211000124568358999508100024
Q gi|254780809|r  217 RNGYKIVILGHSNAGKSSLFNALAKK----------------DVAIVTDIPGTTRDVLTIDLDLEGYLVKISDTAGIRET  280 (440)
Q Consensus       217 ~~g~~v~i~G~pN~GKSSL~N~L~~~----------------~~aIVs~~~GTTRD~i~~~~~i~g~~~~l~DTaGir~t  280 (440)
T Consensus        10 kp~~ni~~~GHVD~GKSTL~g~Lt~~l~~~~g~~~~~~~~~~D~~~eEr~rGiTid~~~~~~~t~~~~~~~iD~PGH~~-   88 (397)
T PRK00049         10 KPHVNVGTIGHVDHGKTTLTAAITKVLAKKYGGAEAKAYDQIDNAPEEKARGITINTAHVEYETEKRHYAHVDCPGHAD-   88 (397)
T ss_pred             CCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHCCCEEEEEEEEEECCCCEEEEECCCCHHH-
T ss_conf             9832999991258889999999986666543853100133302576676258169987999972881499951786388-


Q ss_pred             CHHHHHHHHHHHHHHHHHHCCEEECCCCCCHH------HHHH--HCCCC-CCCCCCCCCCCC
Q ss_conf             10356666788899850301102013589856------6343--12898-532222333446
Q gi|254780809|r  281 DDIVEKEGIKRTFLEVENADLILLLKEINSKK------EISF--PKNID-FIFIGTKSDLYS  333 (440)
Q Consensus       281 ~d~IE~~GI~ra~~~i~~aDlil~v~D~~~~~------~~~~--~~~~~-~i~V~NK~Dl~~  333 (440)
T Consensus        89 --f-----iknmI~Ga~~~D~alLVV~A~~G~~~QT~EHl~l~~~LGv~~~iV~vnK~D~v~  143 (397)
T PRK00049         89 --Y-----VKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVFLNKCDMVD  143 (397)
T ss_pred             --H-----HHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCC
T ss_conf             --8-----999873012156799999748886652899999999809982799998668888