HHsearch alignment for GI: 254780809 and conserved domain: PRK00098

Probab=98.34  E-value=6.4e-07  Score=67.81  Aligned_cols=76  Identities=33%  Similarity=0.444  Sum_probs=48.3

Q ss_pred             CCCEEEECCCCCCHHHHHHHHHCCHHC---CCCCCCC----CCEEECCCCCCCCCEEEEEEECCHHCCCC-HHHHHHHHH
Q ss_conf             230243114663188899998552000---2345468----72110001245683589995081000241-035666678
Q gi|254780809|r  219 GYKIVILGHSNAGKSSLFNALAKKDVA---IVTDIPG----TTRDVLTIDLDLEGYLVKISDTAGIRETD-DIVEKEGIK  290 (440)
Q Consensus       219 g~~v~i~G~pN~GKSSL~N~L~~~~~a---IVs~~~G----TTRD~i~~~~~i~g~~~~l~DTaGir~t~-d~IE~~GI~  290 (440)
T Consensus       164 ~k~sv~~G~SGVGKSSLiN~L~~~~~~~t~~is~~~~rGrHTTt~~~l~~l~-~G---~iiDTPG~r~~~l~~~~~~~l~  239 (298)
T PRK00098        164 GKVTVLAGQSGVGKSTLLNALVPELELKTGEISEALGRGKHTTTHVELYDLP-GG---LLIDTPGFSSFGLEHLEAEDLE  239 (298)
T ss_pred             CCEEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEEEEEECC-CC---EEEECCCCCCCCCCCCCHHHHH
T ss_conf             9869998789887888887607144456675566518972133046899869-97---5981898775566779979998


Q ss_pred             HHHHHHHH
Q ss_conf             88998503
Q gi|254780809|r  291 RTFLEVEN  298 (440)
Q Consensus       291 ra~~~i~~  298 (440)
T Consensus       240 ~~F~e~~~  247 (298)
T PRK00098        240 HAFPEFRP  247 (298)
T ss_pred             HHHHHHHH
T ss_conf             86788999