HHsearch alignment for GI: 254780809 and conserved domain: PRK00098

>PRK00098 ribosome-associated GTPase; Reviewed.
Probab=94.93  E-value=0.012  Score=38.18  Aligned_cols=70  Identities=21%  Similarity=0.199  Sum_probs=46.4

Q ss_pred             HHHHHHHCCEEECCCCCCHHH----H------HHHCCCCCCCCCCCCCCCCCCCHH------------HHHHHHHHHHHH
Q ss_conf             998503011020135898566----3------431289853222233344654200------------000133332323
Q gi|254780809|r  293 FLEVENADLILLLKEINSKKE----I------SFPKNIDFIFIGTKSDLYSTYTEE------------YDHLISSFTGEG  350 (440)
Q Consensus       293 ~~~i~~aDlil~v~D~~~~~~----~------~~~~~~~~i~V~NK~Dl~~~~~~~------------~~~~ISaktg~G  350 (440)
T Consensus        75 q~iAANiD~~~iV~s~~~P~~~~~~idR~Lv~a~~~~i~pvivlnK~DL~~~~~~~~~~~~~y~~~gy~v~~~S~~~~~g  154 (298)
T PRK00098         75 KLIAANVDQAVIVFAAKEPDFSTDLLDRFLVLAEANDIKPIIVLNKIDLVDDLEEARERLALYRAIGYDVLELSAKEGPG  154 (298)
T ss_pred             CEEEEECCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCC
T ss_conf             32787447899998568898998999999999998699589996424564779999999999987899789996899989


Q ss_pred             HHHHHHHHHHHH
Q ss_conf             589999999996
Q gi|254780809|r  351 LEELINKIKSIL  362 (440)
Q Consensus       351 i~~L~~~I~~~l  362 (440)
T Consensus       155 ~~~L~~~l~~k~  166 (298)
T PRK00098        155 LDELKPLLAGKV  166 (298)
T ss_pred             HHHHHHHHCCCE
T ss_conf             999999857986