HHsearch alignment for GI: 254780809 and conserved domain: PRK10463
>PRK10463 hydrogenase nickel incorporation protein HypB; Provisional.
Probab=97.91 E-value=2.2e-05 Score=57.07 Aligned_cols=143 Identities=16% Similarity=0.171 Sum_probs=88.1
Q ss_pred HHHHHHHCC-CEEEECCCCCCHHHHHHHHHCC---H---HCCCCCCCCCCEEECCCCCCCCCEEEEEEECCHHCCCCHHH
Q ss_conf 455432023-0243114663188899998552---0---00234546872110001245683589995081000241035
Q gi|254780809|r 212 LGEIIRNGY-KIVILGHSNAGKSSLFNALAKK---D---VAIVTDIPGTTRDVLTIDLDLEGYLVKISDTAGIRETDDIV 284 (440)
Q Consensus 212 ~~~~l~~g~-~v~i~G~pN~GKSSL~N~L~~~---~---~aIVs~~~GTTRD~i~~~~~i~g~~~~l~DTaGir~t~d~I 284 (440)
T Consensus 96 R~~f~~~gv~~lNl~sSPGSGKTtLLe~ti~~L~~~~~~aVIeGD~~-T~~DA--~RI~~~Gv~avQInTG~~----CHL 168 (290)
T PRK10463 96 RARFAARKQLVLNLVSSPGSGKTTLLTETLMRLKDSVPCAVIEGDQQ-TVNDA--ARIRATGTPAIQVNTGKG----CHL 168 (290)
T ss_pred HHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCC-CHHHH--HHHHHCCCCEEEECCCCC----CCC
T ss_conf 99999879189993069987889999999998733675799960423-56679--999976995899547997----675
Q ss_pred HHHHHHHHHHHHHHHCCEEECCC-CCC---HHHHH-----------HH--CCC----------CCCCCCCCCCCCCCCCH
Q ss_conf 66667888998503011020135-898---56634-----------31--289----------85322223334465420
Q gi|254780809|r 285 EKEGIKRTFLEVENADLILLLKE-INS---KKEIS-----------FP--KNI----------DFIFIGTKSDLYSTYTE 337 (440)
Q Consensus 285 E~~GI~ra~~~i~~aDlil~v~D-~~~---~~~~~-----------~~--~~~----------~~i~V~NK~Dl~~~~~~ 337 (440)
T Consensus 169 DA~MV~~al~~l~l~~~dllfIENVGNLVCPA~FDLGE~~kVvvlSVtEGeDKPlKYP~mF~~ad~vlinKiDLlp~~dF 248 (290)
T PRK10463 169 DAQMIADAAPRLPLDDNGILFIENVGNLVCPASFDLGEKHKVAVLSVTEGEDKPLKYPHMFAAASLMLLNKVDLLPYLNF 248 (290)
T ss_pred CHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHCCEEEEEHHHHHHHCCC
T ss_conf 99999999984898779899981278843551203677617999970688886444766764257899865651220288
Q ss_pred ---------------HHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf ---------------000013333232358999999999
Q gi|254780809|r 338 ---------------EYDHLISSFTGEGLEELINKIKSI 361 (440)
Q Consensus 338 ---------------~~~~~ISaktg~Gi~~L~~~I~~~ 361 (440)
T Consensus 249 D~~~~~~~~~~vNp~~~v~~vSa~tGeGld~W~~WL~~~ 287 (290)
T PRK10463 249 DVEKCIACAREVNPEIEIILISATSGEGMDQWLNWLETQ 287 (290)
T ss_pred CHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHH
T ss_conf 999999999986989858997568887899999999997