HHsearch alignment for GI: 254780809 and conserved domain: PRK10867

>PRK10867 signal recognition particle protein; Provisional.
Probab=96.93  E-value=0.03  Score=35.41  Aligned_cols=113  Identities=19%  Similarity=0.280  Sum_probs=61.2

Q ss_pred             CCCHHHHHHHHHHHHHHHHHH-HCC-CEEEECCCCCCHHHHHHHHHCC-----H--HCCCC-CC--CC------------
Q ss_conf             100011212333223455432-023-0243114663188899998552-----0--00234-54--68------------
Q gi|254780809|r  197 LFLKNDISSHISQGKLGEIIR-NGY-KIVILGHSNAGKSSLFNALAKK-----D--VAIVT-DI--PG------------  252 (440)
Q Consensus       197 ~~i~~~l~~ll~~~~~~~~l~-~g~-~v~i~G~pN~GKSSL~N~L~~~-----~--~aIVs-~~--~G------------  252 (440)
T Consensus        76 kiv~~eL~~lLg~~~~~l~~~~~~p~VIm~vGLqGsGKTTT~aKLA~~lk~k~~k~vllvaaDt~RpaA~eQL~~la~~~  155 (453)
T PRK10867         76 KIVRNELVAAMGEENQTLNLAAQPPAVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQV  155 (453)
T ss_pred             HHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHC
T ss_conf             99999999985888766633789996999974688851858999999999738983798558877058999999999851


Q ss_pred             --------CCEEECC---C---CCCCCCEEEEEEECCHHCCCC-HHHHHHHHHHHHHHHHHHCCEEECCCCCCHH
Q ss_conf             --------7211000---1---245683589995081000241-0356666788899850301102013589856
Q gi|254780809|r  253 --------TTRDVLT---I---DLDLEGYLVKISDTAGIRETD-DIVEKEGIKRTFLEVENADLILLLKEINSKK  312 (440)
Q Consensus       253 --------TTRD~i~---~---~~~i~g~~~~l~DTaGir~t~-d~IE~~GI~ra~~~i~~aDlil~v~D~~~~~  312 (440)
T Consensus       156 ~v~~~~~~~~~dp~~ia~~a~~~ak~~~~DvvivDTAGRl~~d~~Lm~El--~-~i~~~~~P~e~llV~Da~~GQ  227 (453)
T PRK10867        156 GVDFFPSDVGQKPVDIVNAALKEAKLKFYDVLLVDTAGRLHVDEAMMDEI--K-QVHASINPVETLFVVDAMTGQ  227 (453)
T ss_pred             CCCEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHCCHHHHHHH--H-HHHHHHCCCCEEEEEECCCCH
T ss_conf             98043678899889999999999997799999997876012108889999--9-998763787137974322356