HHsearch alignment for GI: 254780809 and conserved domain: PRK12289

>PRK12289 ribosome-associated GTPase; Reviewed.
Probab=95.47  E-value=0.0053  Score=40.63  Aligned_cols=69  Identities=23%  Similarity=0.348  Sum_probs=47.5

Q ss_pred             HHHHHCCEEECCCCCCHHH----H------HHHCCCCCCCCCCCCCCCCCCCHH-----------HHHHHHHHHHHHHHH
Q ss_conf             8503011020135898566----3------431289853222233344654200-----------000133332323589
Q gi|254780809|r  295 EVENADLILLLKEINSKKE----I------SFPKNIDFIFIGTKSDLYSTYTEE-----------YDHLISSFTGEGLEE  353 (440)
Q Consensus       295 ~i~~aDlil~v~D~~~~~~----~------~~~~~~~~i~V~NK~Dl~~~~~~~-----------~~~~ISaktg~Gi~~  353 (440)
T Consensus        85 ~VANvDq~liV~s~~~P~~~~~~LDRfLv~ae~~~i~~vivlnK~DL~~~~e~~~~~~~~~~~GY~~i~iS~~~~~gl~~  164 (351)
T PRK12289         85 PIANVDQILLVFALAEPPLDPWQLSRFLVKAESTGLEIQLCLNKADLVSPTQQQQWQDRLAQWGYQPLFISVEQGIGLEA  164 (351)
T ss_pred             CCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHH
T ss_conf             75670359999965789988779999999999879978999865774998999999999997798289996789968999


Q ss_pred             HHHHHHHHHH
Q ss_conf             9999999963
Q gi|254780809|r  354 LINKIKSILS  363 (440)
Q Consensus       354 L~~~I~~~l~  363 (440)
T Consensus       165 L~~~L~~k~t  174 (351)
T PRK12289        165 LLKQLRNKIT  174 (351)
T ss_pred             HHHHHCCCEE
T ss_conf             9998759869