HHsearch alignment for GI: 254780809 and conserved domain: PRK12289
>PRK12289 ribosome-associated GTPase; Reviewed.
Probab=95.47 E-value=0.0053 Score=40.63 Aligned_cols=69 Identities=23% Similarity=0.348 Sum_probs=47.5
Q ss_pred HHHHHCCEEECCCCCCHHH----H------HHHCCCCCCCCCCCCCCCCCCCHH-----------HHHHHHHHHHHHHHH
Q ss_conf 8503011020135898566----3------431289853222233344654200-----------000133332323589
Q gi|254780809|r 295 EVENADLILLLKEINSKKE----I------SFPKNIDFIFIGTKSDLYSTYTEE-----------YDHLISSFTGEGLEE 353 (440)
Q Consensus 295 ~i~~aDlil~v~D~~~~~~----~------~~~~~~~~i~V~NK~Dl~~~~~~~-----------~~~~ISaktg~Gi~~ 353 (440)
T Consensus 85 ~VANvDq~liV~s~~~P~~~~~~LDRfLv~ae~~~i~~vivlnK~DL~~~~e~~~~~~~~~~~GY~~i~iS~~~~~gl~~ 164 (351)
T PRK12289 85 PIANVDQILLVFALAEPPLDPWQLSRFLVKAESTGLEIQLCLNKADLVSPTQQQQWQDRLAQWGYQPLFISVEQGIGLEA 164 (351)
T ss_pred CCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHH
T ss_conf 75670359999965789988779999999999879978999865774998999999999997798289996789968999
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999963
Q gi|254780809|r 354 LINKIKSILS 363 (440)
Q Consensus 354 L~~~I~~~l~ 363 (440)
T Consensus 165 L~~~L~~k~t 174 (351)
T PRK12289 165 LLKQLRNKIT 174 (351)
T ss_pred HHHHHCCCEE
T ss_conf 9998759869