HHsearch alignment for GI: 254780809 and conserved domain: PRK13851
>PRK13851 type IV secretion system protein VirB11; Provisional.
Probab=94.27 E-value=0.037 Score=34.74 Aligned_cols=29 Identities=14% Similarity=0.354 Sum_probs=24.9
Q ss_pred HHHHHCCCEEEECCCCCCHHHHHHHHHCC
Q ss_conf 54320230243114663188899998552
Q gi|254780809|r 214 EIIRNGYKIVILGHSNAGKSSLFNALAKK 242 (440)
Q Consensus 214 ~~l~~g~~v~i~G~pN~GKSSL~N~L~~~ 242 (440)
T Consensus 157 ~aV~~r~NIlIsGgTGSGKTTllnALl~~ 185 (343)
T PRK13851 157 ACVVGRLTMLLCGPTGSGKTTMSKTLISA 185 (343)
T ss_pred HHHHCCCCEEEECCCCCCHHHHHHHHHHC
T ss_conf 99976988999888986199999999962