HHsearch alignment for GI: 254780809 and conserved domain: PTZ00099

>PTZ00099 rab6; Provisional.
Probab=98.44  E-value=3.8e-07  Score=69.39  Aligned_cols=102  Identities=22%  Similarity=0.254  Sum_probs=71.3

Q ss_pred             EECCCCCCCCCE--EEEEEECCHHCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHH-------H-----HCCCC
Q ss_conf             100012456835--899950810002410356666788899850301102013589856634-------3-----12898
Q gi|254780809|r  256 DVLTIDLDLEGY--LVKISDTAGIRETDDIVEKEGIKRTFLEVENADLILLLKEINSKKEIS-------F-----PKNID  321 (440)
Q Consensus       256 D~i~~~~~i~g~--~~~l~DTaGir~t~d~IE~~GI~ra~~~i~~aDlil~v~D~~~~~~~~-------~-----~~~~~  321 (440)
T Consensus        16 df~~k~i~i~~~~v~l~IWDTAGqE~f~--------sl~~~y~r~a~~~ilVyDit~~~SF~~l~~W~~~i~~~~~~~~~   87 (176)
T PTZ00099         16 DFLSKTLYLDEGPVRLQLWDTAGQERFR--------SLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILNERGKDVI   87 (176)
T ss_pred             EEEEEEEEECCEEEEEEEEECCCCCCHH--------HHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             8899999999999999999799863413--------57688707986799985042077899999999999985388774


Q ss_pred             CCCCCCCCCCCCCCCHH-------------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             53222233344654200-------------000133332323589999999996322
Q gi|254780809|r  322 FIFIGTKSDLYSTYTEE-------------YDHLISSFTGEGLEELINKIKSILSNK  365 (440)
Q Consensus       322 ~i~V~NK~Dl~~~~~~~-------------~~~~ISaktg~Gi~~L~~~I~~~l~~~  365 (440)
T Consensus        88 iiLVGNK~DL~~~r~V~~ee~~~~A~~~~~~f~EtSAktg~nV~e~F~~la~~i~~~  144 (176)
T PTZ00099         88 IALVGNKTDLGDLRKVTYEEGMQKAQEYNTMFHETSAKAGHNIKVLFKKIAAKLPNL  144 (176)
T ss_pred             EEEEEECCCHHHHCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCH
T ss_conf             399985565586168599999999998599999984899949899999999986080