HHsearch alignment for GI: 254780809 and conserved domain: TIGR00101
>TIGR00101 ureG urease accessory protein UreG; InterPro: IPR004400 This is a GTP hydrolase for assembly of the nickel metallocentre of urease. A similar protein, hypB, is an accessory protein for expression of hydrogenase, which also uses nickel. They play a central role in nitrogen metabolism.; GO: 0005524 ATP binding, 0016151 nickel ion binding.
Probab=95.84 E-value=0.035 Score=34.95 Aligned_cols=116 Identities=25% Similarity=0.280 Sum_probs=66.0
Q ss_pred CCEEEECCCCCCHHHHHHHHHC-----CHHCCCCCCCCCCEE--ECCCCCCCCCEEEEEEECCH-----HCCCCHHHHHH
Q ss_conf 3024311466318889999855-----200023454687211--00012456835899950810-----00241035666
Q gi|254780809|r 220 YKIVILGHSNAGKSSLFNALAK-----KDVAIVTDIPGTTRD--VLTIDLDLEGYLVKISDTAG-----IRETDDIVEKE 287 (440)
Q Consensus 220 ~~v~i~G~pN~GKSSL~N~L~~-----~~~aIVs~~~GTTRD--~i~~~~~i~g~~~~l~DTaG-----ir~t~d~IE~~ 287 (440)
T Consensus 2 ~~iG~~GPvG~Gktal~e~l~~~~~~~y~~av~tndiyt~eda~fl~~~~~l~~~ri~GvetGGCPhtairedas-~nl~ 80 (199)
T TIGR00101 2 VKIGVAGPVGSGKTALIEALTRELAKKYDLAVITNDIYTQEDAEFLVKNSVLPPERILGVETGGCPHTAIREDAS-LNLE 80 (199)
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHH-HHHH
T ss_conf 366650477764689999999988740667787311001246888876412662226774158987300100021-2188
Q ss_pred HHHHHHHHH---------------------HHHCCEEECCCCCCHHHHHHHCC----CCCCCCCCCCCCCCCCC
Q ss_conf 678889985---------------------03011020135898566343128----98532222333446542
Q gi|254780809|r 288 GIKRTFLEV---------------------ENADLILLLKEINSKKEISFPKN----IDFIFIGTKSDLYSTYT 336 (440)
Q Consensus 288 GI~ra~~~i---------------------~~aDlil~v~D~~~~~~~~~~~~----~~~i~V~NK~Dl~~~~~ 336 (440)
T Consensus 81 a~~~~~~rf~~~~~~~~esGGdnl~atf~P~l~d~t~~vidva~G~kiPrkGGPGit~sdllvink~dlaP~vG 154 (199)
T TIGR00101 81 AVEELEARFPDLELVFIESGGDNLSATFSPELADLTIFVIDVAEGDKIPRKGGPGITRSDLLVINKIDLAPFVG 154 (199)
T ss_pred HHHHHHHCCCCEEEEEEECCCCCCEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCCCHHEEEEECCCCCCCCC
T ss_conf 99988621564048998328862000027640236788997205874567788985300122432001253112