>TIGR00231 small_GTP small GTP-binding protein domain; InterPro: IPR005225 Proteins with a small GTP-binding domain include Ras, RhoA, Rab11, translation elongation factor G, translation initiation factor IF-2, tetratcycline resistance protein TetM, CDC42, Era, ADP-ribosylation factors, tdhF, and many others . In some proteins the domain occurs more than once. Among them there is a large number of small GTP-binding proteins and related domains in larger proteins. Note that the alpha chains of heterotrimeric G proteins are larger proteins in which the NKXD motif is separated from the GxxxxGK[ST] motif (P-loop) by a long insert and are not easily detected by this model.; GO: 0005525 GTP binding.

Probab=99.18 E-value=3.5e-11 Score=97.34 Aligned_cols=140 Identities=30% Similarity=0.451 Sum_probs=111.8 Q ss_pred CCCEEEECCCCCCHHHHHHHHHCCHHCCCCCCC--CCCEEECCCCCCCCC-----------EEEEEEECCHH--CCCCHH Q ss_conf 230243114663188899998552000234546--872110001245683-----------58999508100--024103 Q gi|254780809|r 219 GYKIVILGHSNAGKSSLFNALAKKDVAIVTDIP--GTTRDVLTIDLDLEG-----------YLVKISDTAGI--RETDDI 283 (440) Q Consensus 219 g~~v~i~G~pN~GKSSL~N~L~~~~~aIVs~~~--GTTRD~i~~~~~i~g-----------~~~~l~DTaGi--r~t~d~ 283 (440) T Consensus 3 ~~~~~~~g~~~~Gk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~d~~G~~~~~~~~~ 82 (186) T TIGR00231 3 DIKIGIVGDPNVGKSTLLNRLLGNKGSITESGPTDGTTRDYVTESIEEDGKTITGATFQWGYKFNLLDTPGLHRQEDYDA 82 (186) T ss_pred CEEEEEEECCCCCHHHHHHHHHHCCCCEEECCCCCCCCHHHHEEEEEECCEEEEEEEEECCEEEEEEECCCCHHHHHHHH T ss_conf 50589973477660455544541012001023233320000001134558023434310242789862577113555544 Q ss_pred HHHHHHHHHHHHHHHHCCEEECCCCCCHHH------HHH--HCCCCCCCCCCCCCCCCCCCH------------------ Q ss_conf 566667888998503011020135898566------343--128985322223334465420------------------ Q gi|254780809|r 284 VEKEGIKRTFLEVENADLILLLKEINSKKE------ISF--PKNIDFIFIGTKSDLYSTYTE------------------ 337 (440) Q Consensus 284 IE~~GI~ra~~~i~~aDlil~v~D~~~~~~------~~~--~~~~~~i~V~NK~Dl~~~~~~------------------ 337 (440) T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (186) T TIGR00231 83 LRRLYYPEVLSSLEVLDLVILVLDVEDGLEKDTKEIIHHADKYGVPILLVGNKIDLKDEKPGYFVDLKPHLASLFAKLNG 162 (186) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHCC T ss_conf 54332234454443333333222111001025677875322127416998513365546754010000345555554236 Q ss_pred HH-HHHHHHHHHHHHHHHHHHH Q ss_conf 00-0013333232358999999 Q gi|254780809|r 338 EY-DHLISSFTGEGLEELINKI 358 (440) Q Consensus 338 ~~-~~~ISaktg~Gi~~L~~~I 358 (440) T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~ 184 (186) T TIGR00231 163 EPHFIPLSAETGKGIDSLFGLV 184 (186) T ss_pred CCCEEECCHHHHCCHHHHHHHH T ss_conf 6401111001110045566654

HHsearch alignment for GI: 254780809 and conserved domain: TIGR00231