HHsearch alignment for GI: 254780809 and conserved domain: TIGR02729
>TIGR02729 Obg_CgtA GTP-binding protein Obg/CgtA; InterPro: IPR014100 This entry describes a universal, mostly one-gene-per-genome GTP-binding protein that associates with ribosomal subunits and appears to play a role in ribosomal RNA maturation. Mutations in this gene are pleiotropic, but it appears that effects on cellular functions such as chromosome partition may be secondary to the effect on ribosome structure..
Probab=99.65 E-value=1.5e-16 Score=134.70 Aligned_cols=112 Identities=22% Similarity=0.259 Sum_probs=86.4
Q ss_pred CCEEEECCCCCCHHHHHHHHHCCHHCCCCCCCCCCEEECCCCCCCCCE----EEEEEECCHHCCCCHHHHHHHHHHHHHH
Q ss_conf 302431146631888999985520002345468721100012456835----8999508100024103566667888998
Q gi|254780809|r 220 YKIVILGHSNAGKSSLFNALAKKDVAIVTDIPGTTRDVLTIDLDLEGY----LVKISDTAGIRETDDIVEKEGIKRTFLE 295 (440)
Q Consensus 220 ~~v~i~G~pN~GKSSL~N~L~~~~~aIVs~~~GTTRD~i~~~~~i~g~----~~~l~DTaGir~t~d~IE~~GI~ra~~~ 295 (440)
T Consensus 159 ADVGLvGfPNAGKSTLLs~~S~Ak-PKiAdYPFTTL~P~LGvv~~~~~~Y~~~fviADIPGLIEGAs~G~GLG~-~FLKH 236 (296)
T TIGR02729 159 ADVGLVGFPNAGKSTLLSAISNAK-PKIADYPFTTLEPNLGVVRVDDNKYERSFVIADIPGLIEGASEGKGLGH-KFLKH 236 (296)
T ss_pred EEEEEECCCCCCHHHHHHHHHCCC-CEECCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCHHHHHCCCCCCH-HHHHH
T ss_conf 202103578874688888876278-8223878745653112898748741688999856861566626887533-55457
Q ss_pred HHHHCCEEECCCCCCH-----HH---HH--------------HHCCCCCCCCCCCCCCCC
Q ss_conf 5030110201358985-----66---34--------------312898532222333446
Q gi|254780809|r 296 VENADLILLLKEINSK-----KE---IS--------------FPKNIDFIFIGTKSDLYS 333 (440)
Q Consensus 296 i~~aDlil~v~D~~~~-----~~---~~--------------~~~~~~~i~V~NK~Dl~~ 333 (440)
T Consensus 237 IERt~~L~hviD~~~~qlSkh~~~~p~~~y~~l~~EL~~Y~~~L~~k~~~iv~NK~Dl~~ 296 (296)
T TIGR02729 237 IERTRLLLHVIDASGIQLSKHDGRDPIEDYETLRNELELYSPELADKPQIIVLNKIDLLD 296 (296)
T ss_pred HHHEEEEEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHCCHHHCCCCEEEEEEECCCCC
T ss_conf 520266887980687534242898889999999999975087362780799986067789