HHsearch alignment for GI: 254780809 and conserved domain: TIGR03596
>TIGR03596 GTPase_YlqF ribosome biogenesis GTP-binding protein YlqF. Members of this protein family are GTP-binding proteins involved in ribosome biogenesis, including the essential YlqF protein of Bacillus subtilis, which is an essential protein. They are related to Era, EngA, and other GTPases of ribosome biogenesis, but are circularly permuted. This family is not universal, and is not present in Escherichia coli, and so is not as well studied as some other GTPases. This model is built for bacterial members.
Probab=99.56 E-value=3.1e-15 Score=125.47 Aligned_cols=60 Identities=37% Similarity=0.469 Sum_probs=51.2
Q ss_pred HHCCCEEEECCCCCCHHHHHHHHHCCHHCCCCCCCCCCEEECCCCCCCCCEEEEEEECCHHCC
Q ss_conf 202302431146631888999985520002345468721100012456835899950810002
Q gi|254780809|r 217 RNGYKIVILGHSNAGKSSLFNALAKKDVAIVTDIPGTTRDVLTIDLDLEGYLVKISDTAGIRE 279 (440)
Q Consensus 217 ~~g~~v~i~G~pN~GKSSL~N~L~~~~~aIVs~~~GTTRD~i~~~~~i~g~~~~l~DTaGir~ 279 (440)
T Consensus 116 ~~~i~v~vVG~PNVGKSSlIN~L~~~k~~~v~~~PG~Tr~~q~--i~l~~-~i~llDtPGvl~ 175 (276)
T TIGR03596 116 NRPIRAMIVGIPNVGKSTLINRLAGKKVAKVGNRPGVTKGQQW--IKLSD-GLELLDTPGILW 175 (276)
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCCCEEEE--EEECC-CEEEECCCCCCC
T ss_conf 7863899972798758999998736725877796542102589--99579-779966887457