HHsearch alignment for GI: 254780809 and conserved domain: cd01849
>cd01849 YlqF_related_GTPase YlqF-related GTPases. These proteins are found in bacteria, eukaryotes, and archaea. They all exhibit a circular permutation of the GTPase signature motifs so that the order of the conserved G box motifs is G4-G5-G1-G2-G3, with G4 and G5 being permuted from the C-terminal region of proteins in the Ras superfamily to the N-terminus of YlqF-related GTPases.
Probab=99.72 E-value=4.8e-18 Score=144.98 Aligned_cols=61 Identities=36% Similarity=0.528 Sum_probs=53.5
Q ss_pred HHHHHCCCEEEECCCCCCHHHHHHHHHCCHHCCCCCCCCCCEEECCCCCCCCCEEEEEEECCHH
Q ss_conf 5432023024311466318889999855200023454687211000124568358999508100
Q gi|254780809|r 214 EIIRNGYKIVILGHSNAGKSSLFNALAKKDVAIVTDIPGTTRDVLTIDLDLEGYLVKISDTAGI 277 (440)
Q Consensus 214 ~~l~~g~~v~i~G~pN~GKSSL~N~L~~~~~aIVs~~~GTTRD~i~~~~~i~g~~~~l~DTaGi 277 (440)
T Consensus 95 ~~~~~~~~i~ivG~PNVGKSsliN~L~~~~~~~v~~~pGtTrd~~~i~~~---~~~~liDTpGi 155 (155)
T cd01849 95 GKLKKSITVGVIGYPNVGKSSVINALLNKLKLKVGNVPGTTTSQQEVKLD---NKIKLLDTPGI 155 (155)
T ss_pred CCCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCEECEEEEEEC---CCEEEEECCCC
T ss_conf 24556608999877774477899998478506266999838355999968---99899979299