HHsearch alignment for GI: 254780809 and conserved domain: cd01849
>cd01849 YlqF_related_GTPase YlqF-related GTPases. These proteins are found in bacteria, eukaryotes, and archaea. They all exhibit a circular permutation of the GTPase signature motifs so that the order of the conserved G box motifs is G4-G5-G1-G2-G3, with G4 and G5 being permuted from the C-terminal region of proteins in the Ras superfamily to the N-terminus of YlqF-related GTPases.
Probab=97.07 E-value=0.00049 Score=47.77 Aligned_cols=65 Identities=22% Similarity=0.286 Sum_probs=45.9
Q ss_pred CCEEECCCCCCH-----HHH-HH---HCCCCCCCCCCCCCCCCCCCHH------------HHHHHHHHHHHHHHHHHHHH
Q ss_conf 110201358985-----663-43---1289853222233344654200------------00013333232358999999
Q gi|254780809|r 300 DLILLLKEINSK-----KEI-SF---PKNIDFIFIGTKSDLYSTYTEE------------YDHLISSFTGEGLEELINKI 358 (440)
Q Consensus 300 Dlil~v~D~~~~-----~~~-~~---~~~~~~i~V~NK~Dl~~~~~~~------------~~~~ISaktg~Gi~~L~~~I 358 (440)
T Consensus 1 D~il~VvDaR~pl~~~~~~~~~~l~~~~~K~~ilvlNK~Dl~~~~~~~~w~~~~~~~~~~~~~~~S~~~~~~~~~~~~~~ 80 (155)
T cd01849 1 DVILEVLDARDPLGTRSPDIERVLIKEKGKKLILVLNKADLVPKEVLRKWLAYLRHSYPTIPFKISATNGQGIEKKESAF 80 (155)
T ss_pred CEEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEHHHCCCCCHHHHHHHH
T ss_conf 98999996879999889999999986589948999767345898999999999996299851671102674568899999
Q ss_pred HHHHHH
Q ss_conf 999632
Q gi|254780809|r 359 KSILSN 364 (440)
Q Consensus 359 ~~~l~~ 364 (440)
T Consensus 81 ~~~~~~ 86 (155)
T cd01849 81 TKQTNS 86 (155)
T ss_pred HHHHHH
T ss_conf 987156