HHsearch alignment for GI: 254780809 and conserved domain: cd01850
>cd01850 CDC_Septin CDC/Septin. Septins are a conserved family of GTP-binding proteins associated with diverse processes in dividing and non-dividing cells. They were first discovered in the budding yeast S. cerevisiae as a set of genes (CDC3, CDC10, CDC11 and CDC12) required for normal bud morphology. Septins are also present in metazoan cells, where they are required for cytokinesis in some systems, and implicated in a variety of other processes involving organization of the cell cortex and exocytosis. In humans, 12 septin genes generate dozens of polypeptides, many of which comprise heterooligomeric complexes. Since septin mutants are commonly defective in cytokinesis and formation of the neck formation of the neck filaments/septin rings, septins have been considered to be the primary constituents of the neck filaments. Septins belong to the GTPase superfamily for their conserved GTPase motifs and enzymatic activities.
Probab=98.29 E-value=2.5e-06 Score=63.67 Aligned_cols=114 Identities=23% Similarity=0.389 Sum_probs=68.4
Q ss_pred CCEEEECCCCCCHHHHHHHHHCCHHCCCCC---------CCCCCEEECC--CCCCCCCE--EEEEEECCHHCCCCHH---
Q ss_conf 302431146631888999985520002345---------4687211000--12456835--8999508100024103---
Q gi|254780809|r 220 YKIVILGHSNAGKSSLFNALAKKDVAIVTD---------IPGTTRDVLT--IDLDLEGY--LVKISDTAGIRETDDI--- 283 (440)
Q Consensus 220 ~~v~i~G~pN~GKSSL~N~L~~~~~aIVs~---------~~GTTRD~i~--~~~~i~g~--~~~l~DTaGir~t~d~--- 283 (440)
T Consensus 5 fnimVvG~sGlGKsTfiNtLf~~~~~-~~~~~~~~~~~~~~~t~-~i~~~~~~i~e~g~~l~LtviDTpGfGd~i~n~~~ 82 (276)
T cd01850 5 FNIMVVGESGLGKSTFINTLFNTKLI-PSDYPPDPAEEHIDKTV-EIKSSKAEIEENGVKLKLTVIDTPGFGDNINNSDC 82 (276)
T ss_pred EEEEEECCCCCCHHHHHHHHHCCCCC-CCCCCCCCHHHCCCCCC-EEEEEEEEEEECCEEEEEEEEECCCCCCCCCHHHH
T ss_conf 99999768999889999997478577-87777881320568882-58999999963998999999976884122360340
Q ss_pred -------HH---------HHHHHHH-HHHHHHHCCEEECCCCCC----HHHHHHH----CCCCCCCCCCCCCCCCCC
Q ss_conf -------56---------6667888-998503011020135898----5663431----289853222233344654
Q gi|254780809|r 284 -------VE---------KEGIKRT-FLEVENADLILLLKEINS----KKEISFP----KNIDFIFIGTKSDLYSTY 335 (440)
Q Consensus 284 -------IE---------~~GI~ra-~~~i~~aDlil~v~D~~~----~~~~~~~----~~~~~i~V~NK~Dl~~~~ 335 (440)
T Consensus 83 ~~~I~~yI~~qf~~yl~eE~~i~R~~~~~D~RVH~cLYFI~Ptgh~L~~lDi~~mk~Ls~~vNvIPVIaKADtlT~~ 159 (276)
T cd01850 83 WKPIVDYIDDQFDQYLREESRIKRNPRIPDTRVHACLYFIEPTGHGLKPLDIEFMKRLSKRVNIIPVIAKADTLTPE 159 (276)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHH
T ss_conf 99999999999999999985314578887774489999967888888799999999962756456678516669999