HHsearch alignment for GI: 254780809 and conserved domain: cd01855
>cd01855 YqeH YqeH. YqeH is an essential GTP-binding protein. Depletion of YqeH induces an excess initiation of DNA replication, suggesting that it negatively controls initiation of chromosome replication. The YqeH subfamily is common in eukaryotes and sporadically present in bacteria with probable acquisition by plants from chloroplasts. Proteins of the YqeH family contain all sequence motifs typical of the vast class of P-loop-containing GTPases, but show a circular permutation, with a G4-G1-G3 pattern of motifs as opposed to the regular G1-G3-G4 pattern seen in most GTPases.
Probab=99.39 E-value=3.9e-13 Score=110.93 Aligned_cols=57 Identities=46% Similarity=0.657 Sum_probs=47.7
Q ss_pred HCCCEEEECCCCCCHHHHHHHHHCC--------HHCCCCCCCCCCEEECCCCCCCCCEEEEEEECCHH
Q ss_conf 0230243114663188899998552--------00023454687211000124568358999508100
Q gi|254780809|r 218 NGYKIVILGHSNAGKSSLFNALAKK--------DVAIVTDIPGTTRDVLTIDLDLEGYLVKISDTAGI 277 (440)
Q Consensus 218 ~g~~v~i~G~pN~GKSSL~N~L~~~--------~~aIVs~~~GTTRD~i~~~~~i~g~~~~l~DTaGi 277 (440)
T Consensus 126 ~~~~vyvvG~~NvGKSTLiN~Ll~~~~~~~~~~~~~t~S~~PGTTl~~i~~~l~~---~~~l~DtPGi 190 (190)
T cd01855 126 KGGDVYVVGATNVGKSTLINALLKKDNGKKKLKDLLTTSPIPGTTLDLIKIPLGN---GKKLYDTPGI 190 (190)
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCEEEECCC---CCEEEECCCC
T ss_conf 6985799805875467999998630234434566406679997316525897399---9999959599