HHsearch alignment for GI: 254780809 and conserved domain: cd01868

>cd01868 Rab11_like Rab11-like. Rab11a, Rab11b, and Rab25 are closely related, evolutionary conserved Rab proteins that are differentially expressed. Rab11a is ubiquitously synthesized, Rab11b is enriched in brain and heart and Rab25 is only found in epithelia. Rab11/25 proteins seem to regulate recycling pathways from endosomes to the plasma membrane and to the trans-Golgi network. Furthermore, Rab11a is thought to function in the histamine-induced fusion of tubulovesicles containing H+, K+ ATPase with the plasma membrane in gastric parietal cells and in insulin-stimulated insertion of GLUT4 in the plasma membrane of cardiomyocytes. Overexpression of Rab25 has recently been observed in ovarian cancer and breast cancer, and has been correlated with worsened outcomes in both diseases. In addition, Rab25 overexpression has also been observed in prostate cancer, transitional cell carcinoma of the bladder, and invasive breast tumor cells. GTPase activating proteins (GAPs) interact with GTP
Probab=99.40  E-value=1.6e-12  Score=106.71  Aligned_cols=133  Identities=26%  Similarity=0.334  Sum_probs=90.3

Q ss_pred             CCEEEECCCCCCHHHHHHHHHCCHHCCCCCCCCCC-EEECCCCCCCCCE--EEEEEECCHHCCCCHHHHHHHHHHHHHHH
Q ss_conf             30243114663188899998552000234546872-1100012456835--89995081000241035666678889985
Q gi|254780809|r  220 YKIVILGHSNAGKSSLFNALAKKDVAIVTDIPGTT-RDVLTIDLDLEGY--LVKISDTAGIRETDDIVEKEGIKRTFLEV  296 (440)
Q Consensus       220 ~~v~i~G~pN~GKSSL~N~L~~~~~aIVs~~~GTT-RD~i~~~~~i~g~--~~~l~DTaGir~t~d~IE~~GI~ra~~~i  296 (440)
T Consensus         4 ~Kiv~iGd~~VGKTsli~r~~~~~f--~~~~~~Tig~~~~~k~i~~~~~~~~l~iwDtaG~e~~~--------~~~~~~~   73 (165)
T cd01868           4 FKIVLIGDSGVGKSNLLSRFTRNEF--NLDSKSTIGVEFATRSIQIDGKTIKAQIWDTAGQERYR--------AITSAYY   73 (165)
T ss_pred             EEEEEECCCCCCHHHHHHHHHHCCC--CCCCCCCCCEEEEEEEEEECCEEEEEEEEECCCCHHHH--------HHHHHHH
T ss_conf             8999999999789999999972989--99889874478789999999999999999899972126--------7899873


Q ss_pred             HHHCCEEECCCCCCHHHHHH------------HCCCCCCCCCCCCCCCCCCCHH-------------HHHHHHHHHHHHH
Q ss_conf             03011020135898566343------------1289853222233344654200-------------0001333323235
Q gi|254780809|r  297 ENADLILLLKEINSKKEISF------------PKNIDFIFIGTKSDLYSTYTEE-------------YDHLISSFTGEGL  351 (440)
Q Consensus       297 ~~aDlil~v~D~~~~~~~~~------------~~~~~~i~V~NK~Dl~~~~~~~-------------~~~~ISaktg~Gi  351 (440)
T Consensus        74 ~~a~~~ilvydit~~~Sf~~i~~w~~~i~~~~~~~~~iilVgnK~DL~~~r~Vs~~e~~~~a~~~~~~~~E~SAk~g~nV  153 (165)
T cd01868          74 RGAVGALLVYDITKKQTFENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTEEAKAFAEKNGLSFIETSALDGTNV  153 (165)
T ss_pred             HHCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCCHHHHHHHHHHCCCEEEEECCCCCCCH
T ss_conf             32051489862698899999999999999855577359870234786885788899999999985997999678889298


Q ss_pred             HHHHHHHHHHH
Q ss_conf             89999999996
Q gi|254780809|r  352 EELINKIKSIL  362 (440)
Q Consensus       352 ~~L~~~I~~~l  362 (440)
T Consensus       154 ~e~F~~l~~~i  164 (165)
T cd01868         154 EEAFKQLLTEI  164 (165)
T ss_pred             HHHHHHHHHHH
T ss_conf             99999999986