HHsearch alignment for GI: 254780809 and conserved domain: cd01879
>cd01879 FeoB Ferrous iron transport protein B (FeoB) subfamily. E. coli has an iron(II) transport system, known as feo, which may make an important contribution to the iron supply of the cell under anaerobic conditions. FeoB has been identified as part of this transport system. FeoB is a large 700-800 amino acid integral membrane protein. The N terminus contains a P-loop motif suggesting that iron transport may be ATP dependent.
Probab=99.96 E-value=1.2e-29 Score=225.59 Aligned_cols=139 Identities=25% Similarity=0.319 Sum_probs=114.7
Q ss_pred EECCCCCCHHHHHHHHHCCHHCCCCCCCCCCEEECCCCCCCCCEEEEEEECCHHCCCCHHHHHHHHHHHHHHHHHHCCEE
Q ss_conf 31146631888999985520002345468721100012456835899950810002410356666788899850301102
Q gi|254780809|r 224 ILGHSNAGKSSLFNALAKKDVAIVTDIPGTTRDVLTIDLDLEGYLVKISDTAGIRETDDIVEKEGIKRTFLEVENADLIL 303 (440)
Q Consensus 224 i~G~pN~GKSSL~N~L~~~~~aIVs~~~GTTRD~i~~~~~i~g~~~~l~DTaGir~t~d~IE~~GI~ra~~~i~~aDlil 303 (440)
T Consensus 1 ivG~pNvGKSTL~N~L~g~-~~~vs~~pgtTrd~~~~~~~~~~~~~~lvDtpGi~~~~~~~~~e~i~~~~~~~~~~d~vl 79 (158)
T cd01879 1 LVGNPNVGKTTLFNALTGA-RQKVGNWPGVTVEKKEGRFKLGGKEIEIVDLPGTYSLSPYSEDEKVARDFLLGEKPDLIV 79 (158)
T ss_pred CCCCCCCCHHHHHHHHHCC-CCEECCCCCCEEEEEEEEEEECCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEE
T ss_conf 9798988899999999599-864617898276347889962993799997987412564135678999999851787179
Q ss_pred ECCCCCCHHH-H-----HHHCCCCCCCCCCCCCCCCCCCHH------------HHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 0135898566-3-----431289853222233344654200------------0001333323235899999999963
Q gi|254780809|r 304 LLKEINSKKE-I-----SFPKNIDFIFIGTKSDLYSTYTEE------------YDHLISSFTGEGLEELINKIKSILS 363 (440)
Q Consensus 304 ~v~D~~~~~~-~-----~~~~~~~~i~V~NK~Dl~~~~~~~------------~~~~ISaktg~Gi~~L~~~I~~~l~ 363 (440)
T Consensus 80 ~vvD~~~~~~~l~~~~~l~~~~~p~ivV~NK~D~~~~~~~~~~~~~l~~~~~~~ii~iSA~~g~Gi~~L~~~i~el~~ 157 (158)
T cd01879 80 NVVDATNLERNLYLTLQLLELGLPVVVALNMIDEAEKRGIKIDLDKLSELLGVPVVPTSARKGEGIDELKDAIAELAE 157 (158)
T ss_pred EEEECCHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 997774067768999999865998899940277655225466799999871994899987789799999999999867