HHsearch alignment for GI: 254780809 and conserved domain: cd01900

>cd01900 YchF YchF subfamily. YchF is a member of the Obg family, which includes four other subfamilies of GTPases: Obg, DRG, Ygr210, and NOG1. Obg is an essential gene that is involved in DNA replication in C. crescentus and Streptomyces griseus and is associated with the ribosome. Several members of the family, including YchF, possess the TGS domain related to the RNA-binding proteins. Experimental data and genomic analysis suggest that YchF may be part of a nucleoprotein complex and may function as a GTP-dependent translational factor.
Probab=99.35  E-value=6.4e-12  Score=102.51  Aligned_cols=89  Identities=25%  Similarity=0.273  Sum_probs=68.7

Q ss_pred             EEEECCCCCCHHHHHHHHHCCHHCCCCCCCCCCEEECCCCCCCCC---------------E--EEEEEECCHHCCCCHHH
Q ss_conf             243114663188899998552000234546872110001245683---------------5--89995081000241035
Q gi|254780809|r  222 IVILGHSNAGKSSLFNALAKKDVAIVTDIPGTTRDVLTIDLDLEG---------------Y--LVKISDTAGIRETDDIV  284 (440)
Q Consensus       222 v~i~G~pN~GKSSL~N~L~~~~~aIVs~~~GTTRD~i~~~~~i~g---------------~--~~~l~DTaGir~t~d~I  284 (440)
T Consensus         1 ~GivGlpnvGKstlFnalT~~~~-~~~nypf~ti~pn~g~v~VpD~Rl~~L~~~~~p~k~i~a~vefvDIaGLvkgAs~G   79 (274)
T cd01900           1 IGIVGLPNVGKSTLFNALTKAGA-EAANYPFCTIEPNVGIVPVPDERLDKLAEIVKPKKIVPATIEFVDIAGLVKGASKG   79 (274)
T ss_pred             CCEECCCCCCHHHHHHHHHCCCC-CCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCC
T ss_conf             95647899988999999977998-74589977726805899677565889987317765123578998546556775236


Q ss_pred             HHHHHHHHHHHHHHHCCEEECCCCCCHH
Q ss_conf             6666788899850301102013589856
Q gi|254780809|r  285 EKEGIKRTFLEVENADLILLLKEINSKK  312 (440)
Q Consensus       285 E~~GI~ra~~~i~~aDlil~v~D~~~~~  312 (440)
T Consensus        80 eGLG-N~FL~~Ir~vDai~hVVR~F~d~  106 (274)
T cd01900          80 EGLG-NKFLSHIREVDAIAHVVRCFEDD  106 (274)
T ss_pred             CCCC-HHHHHHHHHCCEEEEEHHHCCCC
T ss_conf             7650-89999987346346532111577