HHsearch alignment for GI: 254780809 and conserved domain: cd03114

>cd03114 ArgK-like The function of this protein family is unkown. The protein sequences are similar to the ArgK protein in E. coli. ArgK protein is a membrane ATPase which is required for transporting arginine, ornithine and lysine into the cells by the arginine and ornithine (AO system) and lysine, arginine and ornithine (LAO) transport systems.
Probab=98.22  E-value=1.9e-06  Score=64.58  Aligned_cols=98  Identities=30%  Similarity=0.377  Sum_probs=63.3

Q ss_pred             EEEECCCCCCHHHHHHHHHCC------HHCCCCCCCCCCE-------EECCCC---------------------------
Q ss_conf             243114663188899998552------0002345468721-------100012---------------------------
Q gi|254780809|r  222 IVILGHSNAGKSSLFNALAKK------DVAIVTDIPGTTR-------DVLTID---------------------------  261 (440)
Q Consensus       222 v~i~G~pN~GKSSL~N~L~~~------~~aIVs~~~GTTR-------D~i~~~---------------------------  261 (440)
T Consensus         2 iGitG~pGaGKStLi~~l~~~~~~~g~~VaVlavDPsS~~sgGalLGDRiRm~~~~~~~~vfiRs~atrg~~ggla~~~~   81 (148)
T cd03114           2 IGITGVPGAGKSTLIDALITALRARGKRVAVLAIDPSSPFSGGAILGDRIRMERHASDPGVFIRSLATRGFLGGLSRATP   81 (148)
T ss_pred             EEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHH
T ss_conf             76258997878999999999999789837999968887866862032354534415799836863466665420468899


Q ss_pred             -----CCCCCEEEEEEECCHHCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHCC----CCCCCCCCCCC
Q ss_conf             -----4568358999508100024103566667888998503011020135898566343128----98532222333
Q gi|254780809|r  262 -----LDLEGYLVKISDTAGIRETDDIVEKEGIKRTFLEVENADLILLLKEINSKKEISFPKN----IDFIFIGTKSD  330 (440)
Q Consensus       262 -----~~i~g~~~~l~DTaGir~t~d~IE~~GI~ra~~~i~~aDlil~v~D~~~~~~~~~~~~----~~~i~V~NK~D  330 (440)
T Consensus        82 ~~i~~l~~~g~D~IiIETvGvGQse~-----------~i~~~aD~~i~v~~p~~GD~iQ~~K~gi~e~aDl~vvNK~D  148 (148)
T cd03114          82 EVIRVLDAAGFDVIIVETVGVGQSEV-----------DIASMADTTVVVMAPGAGDDIQAIKAGIMEIADIVVVNKAD  148 (148)
T ss_pred             HHHHHHHHCCCCEEEEECCCCCCCHH-----------HHHHHCCEEEEEECCCCCCHHHHCCCCHHHCCCEEEEECCC
T ss_conf             99999997599989997487775602-----------65543566999963688737761122852124699993789