HHsearch alignment for GI: 254780809 and conserved domain: cd03213
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=94.50 E-value=0.024 Score=36.02 Aligned_cols=43 Identities=33% Similarity=0.413 Sum_probs=30.8
Q ss_pred HHHCCCEEEECCCCCCHHHHHHHHHCCHHCCCCCCCCCCEEECCCCCCCCCEE
Q ss_conf 32023024311466318889999855200023454687211000124568358
Q gi|254780809|r 216 IRNGYKIVILGHSNAGKSSLFNALAKKDVAIVTDIPGTTRDVLTIDLDLEGYL 268 (440)
Q Consensus 216 l~~g~~v~i~G~pN~GKSSL~N~L~~~~~aIVs~~~GTTRD~i~~~~~i~g~~ 268 (440)
T Consensus 32 v~~Gei~~ilGpnGaGKSTLl~~l~Gl~~----~--~~----~~G~i~~~g~~ 74 (194)
T cd03213 32 AKPGELTAIMGPSGAGKSTLLNALAGRRT----G--LG----VSGEVLINGRP 74 (194)
T ss_pred EECCEEEEEECCCCCHHHHHHHHHHCCCC----C--CC----CEEEEEECCEE
T ss_conf 90881999998999519999999857777----8--99----62899999999