HHsearch alignment for GI: 254780809 and conserved domain: cd03223
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=94.16 E-value=0.032 Score=35.20 Aligned_cols=28 Identities=50% Similarity=0.646 Sum_probs=24.7
Q ss_pred HHHCCCEEEECCCCCCHHHHHHHHHCCH
Q ss_conf 3202302431146631888999985520
Q gi|254780809|r 216 IRNGYKIVILGHSNAGKSSLFNALAKKD 243 (440)
Q Consensus 216 l~~g~~v~i~G~pN~GKSSL~N~L~~~~ 243 (440)
T Consensus 24 i~~Ge~v~i~G~sGsGKSTLl~~l~Gl~ 51 (166)
T cd03223 24 IKPGDRLLITGPSGTGKSSLFRALAGLW 51 (166)
T ss_pred ECCCCEEEEECCCCCCHHHHHHHHCCCC
T ss_conf 8899999999589998899999986987