HHsearch alignment for GI: 254780809 and conserved domain: cd03369
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=95.55 E-value=0.007 Score=39.77 Aligned_cols=50 Identities=28% Similarity=0.360 Sum_probs=37.2
Q ss_pred HHHCCCEEEECCCCCCHHHHHHHHHCCHHCCCCCCCCCCEEECCCCCCCCCEEEEEEECCHH
Q ss_conf 32023024311466318889999855200023454687211000124568358999508100
Q gi|254780809|r 216 IRNGYKIVILGHSNAGKSSLFNALAKKDVAIVTDIPGTTRDVLTIDLDLEGYLVKISDTAGI 277 (440)
Q Consensus 216 l~~g~~v~i~G~pN~GKSSL~N~L~~~~~aIVs~~~GTTRD~i~~~~~i~g~~~~l~DTaGi 277 (440)
T Consensus 31 i~~Ge~v~ivG~sGsGKSTLl~ll~g~~~p------------~~G~I~idg~di~~~~~~~~ 80 (207)
T cd03369 31 VKAGEKIGIVGRTGAGKSTLILALFRFLEA------------EEGKIEIDGIDISTIPLEDL 80 (207)
T ss_pred ECCCCEEEEECCCCCCHHHHHHHHHHHCCC------------CCCEEEECCEECCCCCHHHH
T ss_conf 869999999999998799999999987288------------88789999999540799999