HHsearch alignment for GI: 254780809 and conserved domain: cd04107

>cd04107 Rab32_Rab38 Rab38/Rab32 subfamily. Rab32 and Rab38 are members of the Rab family of small GTPases. Human Rab32 was first identified in platelets but it is expressed in a variety of cell types, where it functions as an A-kinase anchoring protein (AKAP). Rab38 has been shown to be melanocyte-specific. GTPase activating proteins (GAPs) interact with GTP-bound Rab and accelerate the hydrolysis of GTP to GDP. Guanine nucleotide exchange factors (GEFs) interact with GDP-bound Rabs to promote the formation of the GTP-bound state. Rabs are further regulated by guanine nucleotide dissociation inhibitors (GDIs), which facilitate Rab recycling by masking C-terminal lipid binding and promoting cytosolic localization. Most Rab GTPases contain a lipid modification site at the C-terminus, with sequence motifs CC, CXC, or CCX. Lipid binding is essential for membrane attachment, a key feature of most Rab proteins.
Probab=99.37  E-value=3.7e-12  Score=104.17  Aligned_cols=135  Identities=16%  Similarity=0.177  Sum_probs=91.6

Q ss_pred             CCEEEECCCCCCHHHHHHHHHCCHHCCCCCCCCC-CEEECCCCCCCC-C--EEEEEEECCHHCCCCHHHHHHHHHHHHHH
Q ss_conf             3024311466318889999855200023454687-211000124568-3--58999508100024103566667888998
Q gi|254780809|r  220 YKIVILGHSNAGKSSLFNALAKKDVAIVTDIPGT-TRDVLTIDLDLE-G--YLVKISDTAGIRETDDIVEKEGIKRTFLE  295 (440)
Q Consensus       220 ~~v~i~G~pN~GKSSL~N~L~~~~~aIVs~~~GT-TRD~i~~~~~i~-g--~~~~l~DTaGir~t~d~IE~~GI~ra~~~  295 (440)
T Consensus         1 fKvvllGd~gVGKTsLi~rf~~~~F--~~~y~~Tig~df~~k~i~~~~~~~v~l~iwDtaGqe~~~~--------l~~~y   70 (201)
T cd04107           1 LKVLVIGDLGVGKTSIIKRYVHGIF--SQHYKATIGVDFALKVIEWDPNTVVRLQLWDIAGQERFGG--------MTRVY   70 (201)
T ss_pred             CEEEEECCCCCCHHHHHHHHHHCCC--CCCCCCCCCEEEEEEEEEECCCEEEEEEEEECCCCCCCCC--------CHHHH
T ss_conf             9799999999789999999982999--9988887567789989996798199999986899832220--------03755


Q ss_pred             HHHHCCEEECCCCCCHHHHHH----------------HCCCCCCCCCCCCCCCCCCCH----------HH----HHHHHH
Q ss_conf             503011020135898566343----------------128985322223334465420----------00----001333
Q gi|254780809|r  296 VENADLILLLKEINSKKEISF----------------PKNIDFIFIGTKSDLYSTYTE----------EY----DHLISS  345 (440)
Q Consensus       296 i~~aDlil~v~D~~~~~~~~~----------------~~~~~~i~V~NK~Dl~~~~~~----------~~----~~~ISa  345 (440)
T Consensus        71 ~~~a~~~ilvydvt~~~Sf~~l~~w~~~i~~~~~~~~~~~ipiilVgNK~DL~~~~~v~~ee~~~~a~~~~~~~~~EtSA  150 (201)
T cd04107          71 YRGAVGAIIVFDVTRPSTFEAVLKWKADLDSKVTLPNGEPIPCLLLANKCDLKKRLAKDGEQMDQFCKENGFIGWFETSA  150 (201)
T ss_pred             CCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEECC
T ss_conf             55776479998279889999899999999998621378987189986655641125689999999999779980999779


Q ss_pred             HHHHHHHHHHHHHHHHHHH
Q ss_conf             3232358999999999632
Q gi|254780809|r  346 FTGEGLEELINKIKSILSN  364 (440)
Q Consensus       346 ktg~Gi~~L~~~I~~~l~~  364 (440)
T Consensus       151 ktg~nV~e~F~~l~~~i~~  169 (201)
T cd04107         151 KEGINIEEAMRFLVKNILA  169 (201)
T ss_pred             CCCCCHHHHHHHHHHHHHH
T ss_conf             9994989999999999986