HHsearch alignment for GI: 254780809 and conserved domain: cd04143

>cd04143 Rhes_like Rhes_like subfamily. This subfamily includes Rhes (Ras homolog enriched in striatum) and Dexras1/AGS1 (activator of G-protein signaling 1). These proteins are homologous, but exhibit significant differences in tissue distribution and subcellular localization. Rhes is found primarily in the striatum of the brain, but is also expressed in other areas of the brain, such as the cerebral cortex, hippocampus, inferior colliculus, and cerebellum. Rhes expression is controlled by thyroid hormones. In rat PC12 cells, Rhes is farnesylated and localizes to the plasma membrane. Rhes binds and activates PI3K, and plays a role in coupling serpentine membrane receptors with heterotrimeric G-protein signaling. Rhes has recently been shown to be reduced under conditions of dopamine supersensitivity and may play a role in determining dopamine receptor sensitivity. Dexras1/AGS1 is a dexamethasone-induced Ras protein that is expressed primarily in the brain, with low expression l
Probab=99.36  E-value=2.5e-12  Score=105.36  Aligned_cols=134  Identities=19%  Similarity=0.275  Sum_probs=94.0

Q ss_pred             CCEEEECCCCCCHHHHHHHHHCCHHCCCCCCCCCCEEECCCCCCCCCE--EEEEEECCHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf             302431146631888999985520002345468721100012456835--899950810002410356666788899850
Q gi|254780809|r  220 YKIVILGHSNAGKSSLFNALAKKDVAIVTDIPGTTRDVLTIDLDLEGY--LVKISDTAGIRETDDIVEKEGIKRTFLEVE  297 (440)
Q Consensus       220 ~~v~i~G~pN~GKSSL~N~L~~~~~aIVs~~~GTTRD~i~~~~~i~g~--~~~l~DTaGir~t~d~IE~~GI~ra~~~i~  297 (440)
T Consensus         1 yKIvvlGdsgVGKTSLi~Rf~~~~F--~~~y~pTi~d~~~k~i~i~g~~v~L~IwDTaGqe~f~s--------l~~~y~~   70 (247)
T cd04143           1 YRMVVLGASKVGKTAIVSRFLGGRF--EEQYTPTIEDFHRKLYSIRGEVYQLDILDTSGNHPFPA--------MRRLSIL   70 (247)
T ss_pred             CEEEEECCCCCCHHHHHHHHHCCCC--CCCCCCCHHHEEEEEEEECCEEEEEEEEECCCCCCCCC--------CHHHHHH
T ss_conf             9799999899789999999964968--99878883531889999999999999996766536874--------4201312


Q ss_pred             HHCCEEECCCCCCHHHHHH---------------------HCCCCCCCCCCCCCCCCCCCH---H-----------HHHH
Q ss_conf             3011020135898566343---------------------128985322223334465420---0-----------0001
Q gi|254780809|r  298 NADLILLLKEINSKKEISF---------------------PKNIDFIFIGTKSDLYSTYTE---E-----------YDHL  342 (440)
Q Consensus       298 ~aDlil~v~D~~~~~~~~~---------------------~~~~~~i~V~NK~Dl~~~~~~---~-----------~~~~  342 (440)
T Consensus        71 ~a~~~IlVYDITnr~SFe~v~~w~~~I~e~k~~~~~~~~~~~~vpiiLVGNK~DL~~~R~Vs~eEa~~~~A~~~~~~f~E  150 (247)
T cd04143          71 TGDVFILVFSLDNRESFEEVCRLREQILETKSCLKNKTKENVKIPMVICGNKADRDFPREVQRDEVEQLVGGDENCAYFE  150 (247)
T ss_pred             CCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHCCCCCHHHHHHHHHHHCCCEEEE
T ss_conf             17789999979987899989999999998640010013578887589986655432017879999999999768987998


Q ss_pred             HHHHHHHHHHHHHHHHHHHHH
Q ss_conf             333323235899999999963
Q gi|254780809|r  343 ISSFTGEGLEELINKIKSILS  363 (440)
Q Consensus       343 ISaktg~Gi~~L~~~I~~~l~  363 (440)
T Consensus       151 tSAKt~~NV~E~F~~L~~~~~  171 (247)
T cd04143         151 VSAKKNSNLDEMFRALFSLAK  171 (247)
T ss_pred             CCCCCCCCHHHHHHHHHHHCC
T ss_conf             878999498999999998549