HHsearch alignment for GI: 254780809 and conserved domain: cd04145

>cd04145 M_R_Ras_like M-Ras/R-Ras-like subfamily. This subfamily contains R-Ras2/TC21, M-Ras/R-Ras3, and related members of the Ras family. M-Ras is expressed in lympho-hematopoetic cells. It interacts with some of the known Ras effectors, but appears to also have its own effectors. Expression of mutated M-Ras leads to transformation of several types of cell lines, including hematopoietic cells, mammary epithelial cells, and fibroblasts. Overexpression of M-Ras is observed in carcinomas from breast, uterus, thyroid, stomach, colon, kidney, lung, and rectum. In addition, expression of a constitutively active M-Ras mutant in murine bone marrow induces a malignant mast cell leukemia that is distinct from the monocytic leukemia induced by H-Ras. TC21, along with H-Ras, has been shown to regulate the branching morphogenesis of ureteric bud cell branching in mice. Most Ras proteins contain a lipid modification site at the C-terminus, with a typical sequence motif CaaX, where a = an ali
Probab=99.44  E-value=5.6e-13  Score=109.84  Aligned_cols=133  Identities=22%  Similarity=0.285  Sum_probs=94.3

Q ss_pred             CCEEEECCCCCCHHHHHHHHHCCHHCCCCCCCCCCEEECCCCCCCCCEE--EEEEECCHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf             3024311466318889999855200023454687211000124568358--99950810002410356666788899850
Q gi|254780809|r  220 YKIVILGHSNAGKSSLFNALAKKDVAIVTDIPGTTRDVLTIDLDLEGYL--VKISDTAGIRETDDIVEKEGIKRTFLEVE  297 (440)
Q Consensus       220 ~~v~i~G~pN~GKSSL~N~L~~~~~aIVs~~~GTTRD~i~~~~~i~g~~--~~l~DTaGir~t~d~IE~~GI~ra~~~i~  297 (440)
T Consensus         3 ~Kiv~lGd~~VGKTsli~r~~~~~f--~~~y~~Ti~~~~~k~~~~~~~~~~l~iwDtaG~e~~~~--------~~~~~~~   72 (164)
T cd04145           3 YKLVVVGGGGVGKSALTIQFIQSYF--VTDYDPTIEDSYTKQCEIDGQWAILDILDTAGQEEFSA--------MREQYMR   72 (164)
T ss_pred             EEEEEECCCCCCHHHHHHHHHCCCC--CCCCCCCEEEEEEEEEEECCEEEEEEEEECCCCCCCCH--------HHHHHHC
T ss_conf             7999999999788999999980989--87567841358999999999999999998988603125--------6798734


Q ss_pred             HHCCEEECCCCCCHHHHHH-------------HCCCCCCCCCCCCCCCCCCCHH-------------HHHHHHHHHHHHH
Q ss_conf             3011020135898566343-------------1289853222233344654200-------------0001333323235
Q gi|254780809|r  298 NADLILLLKEINSKKEISF-------------PKNIDFIFIGTKSDLYSTYTEE-------------YDHLISSFTGEGL  351 (440)
Q Consensus       298 ~aDlil~v~D~~~~~~~~~-------------~~~~~~i~V~NK~Dl~~~~~~~-------------~~~~ISaktg~Gi  351 (440)
T Consensus        73 ~a~~~ilvydi~~~~Sf~~~~~~~~~i~~~~~~~~~piilVgNK~DL~~~r~Vs~~e~~~~a~~~~~~~~E~SAk~~~nV  152 (164)
T cd04145          73 TGEGFLLVFSVTDRGSFEEVDKFHTQILRVKDRDEFPMILVGNKADLEHQRKVSREEGQELARKLKIPYIETSAKDRLNV  152 (164)
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHCCCCHHHHHHHHHHCCCEEEEECCCCCCCH
T ss_conf             67874689856735439999999999998618877752653034573540889999999999981998999854868277


Q ss_pred             HHHHHHHHHHH
Q ss_conf             89999999996
Q gi|254780809|r  352 EELINKIKSIL  362 (440)
Q Consensus       352 ~~L~~~I~~~l  362 (440)
T Consensus       153 ~e~F~~l~~~I  163 (164)
T cd04145         153 DKAFHDLVRVI  163 (164)
T ss_pred             HHHHHHHHHHH
T ss_conf             99999999975