HHsearch alignment for GI: 254780809 and conserved domain: cd04159
>cd04159 Arl10_like Arl10-like subfamily. Arl9/Arl10 was identified from a human cancer-derived EST dataset. No functional information about the subfamily is available at the current time, but crystal structures of human Arl10b and Arl10c have been solved.
Probab=99.54 E-value=3e-14 Score=118.63 Aligned_cols=128 Identities=16% Similarity=0.204 Sum_probs=90.7
Q ss_pred CEEEECCCCCCHHHHHHHHHCCHHCC-CCCCCCCCEEECCCCCCCCCEEEEEEECCHHCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 02431146631888999985520002-34546872110001245683589995081000241035666678889985030
Q gi|254780809|r 221 KIVILGHSNAGKSSLFNALAKKDVAI-VTDIPGTTRDVLTIDLDLEGYLVKISDTAGIRETDDIVEKEGIKRTFLEVENA 299 (440)
Q Consensus 221 ~v~i~G~pN~GKSSL~N~L~~~~~aI-Vs~~~GTTRD~i~~~~~i~g~~~~l~DTaGir~t~d~IE~~GI~ra~~~i~~a 299 (440)
T Consensus 1 ~I~llG~~~~GKTsll~~~~~~~f~~~~~pTig~~----~~~i~~~~~~l~iwDt~G~e~~~--------~l~~~y~~~~ 68 (159)
T cd04159 1 EITLVGLQNSGKTTLVNVIAGGQFSEDTIPTVGFN----MRKVTKGNVTLKVWDLGGQPRFR--------SMWERYCRGV 68 (159)
T ss_pred CEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCEE----EEEEEECCEEEEEEECCCHHHHH--------HHHHHHHCCC
T ss_conf 98999999986999999997599988616732505----89999899999999798358779--------9999874686
Q ss_pred CCEEECCCCCCHHHHH-------------HHCCCCCCCCCCCCCCCCCCCHH----------------HHHHHHHHHHHH
Q ss_conf 1102013589856634-------------31289853222233344654200----------------000133332323
Q gi|254780809|r 300 DLILLLKEINSKKEIS-------------FPKNIDFIFIGTKSDLYSTYTEE----------------YDHLISSFTGEG 350 (440)
Q Consensus 300 Dlil~v~D~~~~~~~~-------------~~~~~~~i~V~NK~Dl~~~~~~~----------------~~~~ISaktg~G 350 (440)
T Consensus 69 ~~ii~V~D~sd~~s~~~~~~~l~~~~~~~~~~~~piliv~NK~Dl~~~~~~~~i~~~~~~~~~~~~~~~~~~~SAktg~g 148 (159)
T cd04159 69 NAIVYVVDAADRTALEAAKNELHDLLEKPSLEGIPLLVLGNKNDLPGALSVDELIEQMNLKSITDREVSCYSISCKEKTN 148 (159)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCC
T ss_conf 36875157787889999999999998544348982898883567643478999999999998734998799997968969
Q ss_pred HHHHHHHHHH
Q ss_conf 5899999999
Q gi|254780809|r 351 LEELINKIKS 360 (440)
Q Consensus 351 i~~L~~~I~~ 360 (440)
T Consensus 149 I~e~f~wL~~ 158 (159)
T cd04159 149 IDIVLDWLIK 158 (159)
T ss_pred HHHHHHHHHC
T ss_conf 8999999965