HHsearch alignment for GI: 254780809 and conserved domain: pfam00071
>pfam00071 Ras Ras family. Includes sub-families Ras, Rab, Rac, Ral, Ran, Rap Ypt1 and more. Shares P-loop motif with GTP_EFTU, arf and myosin_head. See pfam00009 pfam00025, pfam00063. As regards Rab GTPases, these are important regulators of vesicle formation, motility and fusion. They share a fold in common with all Ras GTPases: this is a six-stranded beta-sheet surrounded by five alpha-helices.
Probab=99.60 E-value=4.9e-15 Score=124.13 Aligned_cols=133 Identities=26% Similarity=0.322 Sum_probs=97.9
Q ss_pred CEEEECCCCCCHHHHHHHHHCCHHCCCCCCCCCCEEECCCCCCCCCEE--EEEEECCHHCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 024311466318889999855200023454687211000124568358--999508100024103566667888998503
Q gi|254780809|r 221 KIVILGHSNAGKSSLFNALAKKDVAIVTDIPGTTRDVLTIDLDLEGYL--VKISDTAGIRETDDIVEKEGIKRTFLEVEN 298 (440)
Q Consensus 221 ~v~i~G~pN~GKSSL~N~L~~~~~aIVs~~~GTTRD~i~~~~~i~g~~--~~l~DTaGir~t~d~IE~~GI~ra~~~i~~ 298 (440)
T Consensus 1 Ki~vvG~~~vGKTsli~r~~~~~f-~~~~~~t~~~~~~~~~~~~~~~~~~~~i~Dt~G~e~~~----~----~~~~~~~~ 71 (162)
T pfam00071 1 KLVLVGDGGVGKSSLLIRFTQNKF-PEEYIPTIGVDFYTKTIEVDGKTVKLQIWDTAGQERFR----A----LRPLYYRG 71 (162)
T ss_pred CEEEECCCCCCHHHHHHHHHHCCC-CCCCCCCCEEEEEEEEEEECCEEEEEEEEECCCCHHHH----H----HHHHHHCC
T ss_conf 989999799779999999961999-98747741355678999999999999999789872046----7----88998625
Q ss_pred HCCEEECCCCCCHHHHHH------------HCCCCCCCCCCCCCCCCCCCHH-------------HHHHHHHHHHHHHHH
Q ss_conf 011020135898566343------------1289853222233344654200-------------000133332323589
Q gi|254780809|r 299 ADLILLLKEINSKKEISF------------PKNIDFIFIGTKSDLYSTYTEE-------------YDHLISSFTGEGLEE 353 (440)
Q Consensus 299 aDlil~v~D~~~~~~~~~------------~~~~~~i~V~NK~Dl~~~~~~~-------------~~~~ISaktg~Gi~~ 353 (440)
T Consensus 72 ad~~iivfd~~~~~S~~~i~~~~~~i~~~~~~~~piilvgnK~Dl~~~~~i~~~e~~~~a~~~~~~y~e~Sak~g~gI~~ 151 (162)
T pfam00071 72 AQGFLLVYDITSRDSFENVKKWLEEILRHADDNVPIVLVGNKCDLEDQRVVSTEEGEALAKELGLPFMETSAKTNENVEE 151 (162)
T ss_pred CCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHCCCCCHHHHHHHHHHHCCEEEEECCCCCCCHHH
T ss_conf 76550423489889999999999999985798862889975247465188999999999998099799973788829999
Q ss_pred HHHHHHHHH
Q ss_conf 999999996
Q gi|254780809|r 354 LINKIKSIL 362 (440)
Q Consensus 354 L~~~I~~~l 362 (440)
T Consensus 152 ~F~~i~~~i 160 (162)
T pfam00071 152 AFEELAREI 160 (162)
T ss_pred HHHHHHHHH
T ss_conf 999999996