HHsearch alignment for GI: 254780809 and conserved domain: pfam00437
>pfam00437 GSPII_E Type II/IV secretion system protein. This family contains both type II and type IV pathway secretion proteins from bacteria. VirB11 ATPase is a subunit of the Agrobacterium tumefaciens transfer DNA (T-DNA) transfer system, a type IV secretion pathway required for delivery of T-DNA and effector proteins to plant cells during infection.
Probab=94.37 E-value=0.032 Score=35.16 Aligned_cols=26 Identities=27% Similarity=0.470 Sum_probs=22.3
Q ss_pred HHCCCEEEECCCCCCHHHHHHHHHCC
Q ss_conf 20230243114663188899998552
Q gi|254780809|r 217 RNGYKIVILGHSNAGKSSLFNALAKK 242 (440)
Q Consensus 217 ~~g~~v~i~G~pN~GKSSL~N~L~~~ 242 (440)
T Consensus 137 ~~~~~ilIsG~TGSGKTT~l~all~~ 162 (283)
T pfam00437 137 QARGNILVSGGTGSGKTTLLYALLNE 162 (283)
T ss_pred HCCCEEEEECCCCCCHHHHHHHHHHH
T ss_conf 81975999889999889999999984