HHsearch alignment for GI: 254780809 and conserved domain: pfam02421

>pfam02421 FeoB_N Ferrous iron transport protein B. Escherichia coli has an iron(II) transport system (feo) which may make an important contribution to the iron supply of the cell under anaerobic conditions. FeoB has been identified as part of this transport system. FeoB is a large 700-800 amino acid integral membrane protein. The N terminus contains a P-loop motif suggesting that iron transport may be ATP dependent.
Probab=99.98  E-value=5.8e-32  Score=241.58  Aligned_cols=166  Identities=23%  Similarity=0.296  Sum_probs=128.6

Q ss_pred             CEEEECCCCCCHHHHHHHHHCCHHCCCCCCCCCCEEECCCCCCCCCEEEEEEECCHHCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf             02431146631888999985520002345468721100012456835899950810002410356666788899850301
Q gi|254780809|r  221 KIVILGHSNAGKSSLFNALAKKDVAIVTDIPGTTRDVLTIDLDLEGYLVKISDTAGIRETDDIVEKEGIKRTFLEVENAD  300 (440)
Q Consensus       221 ~v~i~G~pN~GKSSL~N~L~~~~~aIVs~~~GTTRD~i~~~~~i~g~~~~l~DTaGir~t~d~IE~~GI~ra~~~i~~aD  300 (440)
T Consensus         1 tVaIvG~PNvGKSTLlN~L~g~-~~~Vs~~pGtTrd~~~~~~~~~~~~~~lvDTpGi~~~~~~~~~e~v~~~~~~~~~aD   79 (188)
T pfam02421         1 TIALVGNPNVGKTTLFNALTGA-RQHVGNWPGVTVEKKEGTFKYKGYEIEIVDLPGTYSLSPYSEEEKVARDYLLEEKPD   79 (188)
T ss_pred             CEEEECCCCCCHHHHHHHHHCC-CCEEECCCCCCCCEEEEEEEECCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCC
T ss_conf             9899889998999999999599-965638999723335768752516799996888501465327899999998623687


Q ss_pred             CEEECCCCCCHHH-----H-HHHCCCCCCCCCCCCCCCCCCCHH------------HHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             1020135898566-----3-431289853222233344654200------------000133332323589999999996
Q gi|254780809|r  301 LILLLKEINSKKE-----I-SFPKNIDFIFIGTKSDLYSTYTEE------------YDHLISSFTGEGLEELINKIKSIL  362 (440)
Q Consensus       301 lil~v~D~~~~~~-----~-~~~~~~~~i~V~NK~Dl~~~~~~~------------~~~~ISaktg~Gi~~L~~~I~~~l  362 (440)
T Consensus        80 lvl~vvDa~~~er~l~l~~~l~~~~~p~IvVlNK~Dl~~~~~~~~~~~~l~~~lg~~vi~ISA~~g~Gi~eL~~~I~~~~  159 (188)
T pfam02421        80 VIINVVDATNLERNLYLTLQLLELGIPVVVALNMMDEAEKKGIKIDIKKLSELLGVPVVPTSARKGEGIDELKDAIIEVA  159 (188)
T ss_pred             CEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCHHCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHH
T ss_conf             36999767624544899999997699889996170201003652039999987399689999316999999999999997


Q ss_pred             HHHCCCCCCCEEHHHHHHHHHHHHHHHHHH
Q ss_conf             322035886320148999999999999999
Q gi|254780809|r  363 SNKFKKLPFSIPSHKRHLYHLSQTVRYLEM  392 (440)
Q Consensus       363 ~~~~~~~~~~i~~~~Rq~~~L~~a~~~L~~  392 (440)
T Consensus       160 ~~~~~~~-----~~~~~~~~~~~~~~~~~~  184 (188)
T pfam02421       160 EGKVKPP-----LKINYGEEIEEAISELEE  184 (188)
T ss_pred             HCCCCCC-----CCCCCCHHHHHHHHHHHH
T ss_conf             2689998-----016898899999999999