HHsearch alignment for GI: 254780809 and conserved domain: pfam02421
>pfam02421 FeoB_N Ferrous iron transport protein B. Escherichia coli has an iron(II) transport system (feo) which may make an important contribution to the iron supply of the cell under anaerobic conditions. FeoB has been identified as part of this transport system. FeoB is a large 700-800 amino acid integral membrane protein. The N terminus contains a P-loop motif suggesting that iron transport may be ATP dependent.
Probab=99.98 E-value=5.8e-32 Score=241.58 Aligned_cols=166 Identities=23% Similarity=0.296 Sum_probs=128.6
Q ss_pred CEEEECCCCCCHHHHHHHHHCCHHCCCCCCCCCCEEECCCCCCCCCEEEEEEECCHHCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 02431146631888999985520002345468721100012456835899950810002410356666788899850301
Q gi|254780809|r 221 KIVILGHSNAGKSSLFNALAKKDVAIVTDIPGTTRDVLTIDLDLEGYLVKISDTAGIRETDDIVEKEGIKRTFLEVENAD 300 (440)
Q Consensus 221 ~v~i~G~pN~GKSSL~N~L~~~~~aIVs~~~GTTRD~i~~~~~i~g~~~~l~DTaGir~t~d~IE~~GI~ra~~~i~~aD 300 (440)
T Consensus 1 tVaIvG~PNvGKSTLlN~L~g~-~~~Vs~~pGtTrd~~~~~~~~~~~~~~lvDTpGi~~~~~~~~~e~v~~~~~~~~~aD 79 (188)
T pfam02421 1 TIALVGNPNVGKTTLFNALTGA-RQHVGNWPGVTVEKKEGTFKYKGYEIEIVDLPGTYSLSPYSEEEKVARDYLLEEKPD 79 (188)
T ss_pred CEEEECCCCCCHHHHHHHHHCC-CCEEECCCCCCCCEEEEEEEECCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCC
T ss_conf 9899889998999999999599-965638999723335768752516799996888501465327899999998623687
Q ss_pred CEEECCCCCCHHH-----H-HHHCCCCCCCCCCCCCCCCCCCHH------------HHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 1020135898566-----3-431289853222233344654200------------000133332323589999999996
Q gi|254780809|r 301 LILLLKEINSKKE-----I-SFPKNIDFIFIGTKSDLYSTYTEE------------YDHLISSFTGEGLEELINKIKSIL 362 (440)
Q Consensus 301 lil~v~D~~~~~~-----~-~~~~~~~~i~V~NK~Dl~~~~~~~------------~~~~ISaktg~Gi~~L~~~I~~~l 362 (440)
T Consensus 80 lvl~vvDa~~~er~l~l~~~l~~~~~p~IvVlNK~Dl~~~~~~~~~~~~l~~~lg~~vi~ISA~~g~Gi~eL~~~I~~~~ 159 (188)
T pfam02421 80 VIINVVDATNLERNLYLTLQLLELGIPVVVALNMMDEAEKKGIKIDIKKLSELLGVPVVPTSARKGEGIDELKDAIIEVA 159 (188)
T ss_pred CEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCHHCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHH
T ss_conf 36999767624544899999997699889996170201003652039999987399689999316999999999999997
Q ss_pred HHHCCCCCCCEEHHHHHHHHHHHHHHHHHH
Q ss_conf 322035886320148999999999999999
Q gi|254780809|r 363 SNKFKKLPFSIPSHKRHLYHLSQTVRYLEM 392 (440)
Q Consensus 363 ~~~~~~~~~~i~~~~Rq~~~L~~a~~~L~~ 392 (440)
T Consensus 160 ~~~~~~~-----~~~~~~~~~~~~~~~~~~ 184 (188)
T pfam02421 160 EGKVKPP-----LKINYGEEIEEAISELEE 184 (188)
T ss_pred HCCCCCC-----CCCCCCHHHHHHHHHHHH
T ss_conf 2689998-----016898899999999999