HHsearch alignment for GI: 254780809 and conserved domain: smart00173
>smart00173 RAS Ras subfamily of RAS small GTPases. Similar in fold and function to the bacterial EF-Tu GTPase. p21Ras couples receptor Tyr kinases and G protein receptors to protein kinase cascades
Probab=99.51 E-value=1.1e-13 Score=114.79 Aligned_cols=135 Identities=22% Similarity=0.300 Sum_probs=96.9
Q ss_pred CCEEEECCCCCCHHHHHHHHHCCHHCCCCCCCCCCEEECCCCCCCCCEE--EEEEECCHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 3024311466318889999855200023454687211000124568358--99950810002410356666788899850
Q gi|254780809|r 220 YKIVILGHSNAGKSSLFNALAKKDVAIVTDIPGTTRDVLTIDLDLEGYL--VKISDTAGIRETDDIVEKEGIKRTFLEVE 297 (440)
Q Consensus 220 ~~v~i~G~pN~GKSSL~N~L~~~~~aIVs~~~GTTRD~i~~~~~i~g~~--~~l~DTaGir~t~d~IE~~GI~ra~~~i~ 297 (440)
T Consensus 1 fKiv~vGd~~vGKTsli~r~~~~~f--~~~y~~Ti~~~~~k~i~~~~~~~~l~iwDt~G~e~~~--------~~~~~~~~ 70 (164)
T smart00173 1 YKLVVLGSGGVGKSALTIQFVQGHF--VDDYDPTIEDSYRKQIEIDGEVCLLDILDTAGQEEFS--------AMRDQYMR 70 (164)
T ss_pred CEEEEECCCCCCHHHHHHHHHHCCC--CCCCCCCEEEEEEEEEEECCEEEEEEEEECCCCCCHH--------HHHHHHCC
T ss_conf 9899999999789999999972979--9877881367899999999999999999899971035--------67777537
Q ss_pred HHCCEEECCCCCCHHHHHH-------------HCCCCCCCCCCCCCCCCCCCHH-------------HHHHHHHHHHHHH
Q ss_conf 3011020135898566343-------------1289853222233344654200-------------0001333323235
Q gi|254780809|r 298 NADLILLLKEINSKKEISF-------------PKNIDFIFIGTKSDLYSTYTEE-------------YDHLISSFTGEGL 351 (440)
Q Consensus 298 ~aDlil~v~D~~~~~~~~~-------------~~~~~~i~V~NK~Dl~~~~~~~-------------~~~~ISaktg~Gi 351 (440)
T Consensus 71 ~a~~~ilvydi~~~~Sf~~~~~~~~~i~~~~~~~~~piilvgnK~DL~~~r~V~~~e~~~~a~~~~~~~~E~SAk~g~nV 150 (164)
T smart00173 71 TGEGFLLVYSITDRQSFEEIKKFREQILRVKDRDDVPIVLVGNKCDLESERVVSTEEGKELARQWGCPFLETSAKERVNV 150 (164)
T ss_pred CCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHCCCCCHHHHHHHHHHCCCEEEEECCCCCCCH
T ss_conf 98779998307988999999999999998618888866877753463011789999999999983998999858988178
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 8999999999632
Q gi|254780809|r 352 EELINKIKSILSN 364 (440)
Q Consensus 352 ~~L~~~I~~~l~~ 364 (440)
T Consensus 151 ~~~F~~l~~~i~k 163 (164)
T smart00173 151 DEAFYDLVREIRK 163 (164)
T ss_pred HHHHHHHHHHHHC
T ss_conf 9999999999960