HHsearch alignment for GI: 254780810 and conserved domain: COG0378

>COG0378 HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription].
Probab=92.35  E-value=0.84  Score=24.41  Aligned_cols=90  Identities=23%  Similarity=0.208  Sum_probs=51.6

Q ss_pred             CCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHH-HC-CEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf             312220487787899999999998611886469999508787899999984-03-4278236678888999999999999
Q gi|254780810|r  175 QRSLIVAPPRTGKTILLQNIAHSIKKNHPECYLIVLLIDERPEEVTDMQRS-VQ-GEVISSTFDESAARHVQVAEMVIAK  252 (423)
Q Consensus       175 qr~~i~~~~~~gkt~ll~~ia~~~~~~~~~v~~i~~ligEr~~ev~e~~~~-~~-~~vv~st~d~~~~~~~~~a~~a~~~  252 (423)
T Consensus        14 ~~i~v~Gp~GSGKTaLie~~~~~L~~~~~---~aVI~~Di~t~~Da~~l~~~~g~~i~~v~TG~~C---H-~da~m~~~a   86 (202)
T COG0378          14 LRIGVGGPPGSGKTALIEKTLRALKDEYK---IAVITGDIYTKEDADRLRKLPGEPIIGVETGKGC---H-LDASMNLEA   86 (202)
T ss_pred             EEEEECCCCCCCHHHHHHHHHHHHHHHCC---EEEEECEEECHHHHHHHHHCCCCEEEEECCCCCC---C-CCHHHHHHH
T ss_conf             89996179986789999999999975277---6899640400655999973779806874038765---8-867889999


Q ss_pred             HHHHHHCCCC-EEEEEECHH
Q ss_conf             9999977992-899981638
Q gi|254780810|r  253 AKCLVEYGLD-VVILLDSIT  271 (423)
Q Consensus       253 a~~~~e~G~d-Vll~~DslT  271 (423)
T Consensus        87 i~~l~~~~~~~Dll~iEs~G  106 (202)
T COG0378          87 IEELVLDFPDLDLLFIESVG  106 (202)
T ss_pred             HHHHHHCCCCCCEEEEECCC
T ss_conf             99986317767789992376