HHsearch alignment for GI: 254780810 and conserved domain: COG1156
>COG1156 NtpB Archaeal/vacuolar-type H+-ATPase subunit B [Energy production and conversion].
Probab=100.00 E-value=1.9e-38 Score=272.18 Aligned_cols=336 Identities=16% Similarity=0.101 Sum_probs=280.2
Q ss_pred CEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCE-EEEEEEECCCCCCCCCCEEECCCCCCCHHHHHCCCCHHHCCCCC
Q ss_conf 02675045486666556046010000122125987-99988624688876300022225568878851244300020001
Q gi|254780810|r 65 FGFLRSPDANYLAGPDDIYVSPSQIKSFSLKTGDT-VEGSIRAPREGERYFALLKVNAINFDVPERVRNKIHFDNLTPLY 143 (423)
Q Consensus 65 yGFLR~~~~~yl~~~~DiyVs~slir~f~Lr~GD~-V~g~~r~~~~~~~~~~L~rV~~vnG~~~d~~~~~~~f~~l~p~~ 143 (423)
T Consensus 38 ~G~~r~--gqVle~~~~~a~vQVfegT~Gl~~~~t~vrF~g~~l~i~vs~dllGRifnG~G~PiDggp~i~~e~~~dI~g 115 (463)
T COG1156 38 DGEVRR--GQVLEVRGDKAVVQVFEGTSGLDTKGTTVRFTGETLKIPVSEDLLGRIFNGSGKPIDGGPEIVPEDRLDING 115 (463)
T ss_pred CCCEEE--EEEEECCCCEEEEEEEECCCCCCCCCCEEEEECCEEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 987643--457531586489999504457788885589948637876328766544057888478998678775533578
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCC-CC-EEEEEECCCCHHHHHH
Q ss_conf 122343247786532136888998865510231222048778789999999999861188-64-6999950878789999
Q gi|254780810|r 144 PDKRFNMELNNPENKDISSRVIDLIAPIGKGQRSLIVAPPRTGKTILLQNIAHSIKKNHP-EC-YLIVLLIDERPEEVTD 221 (423)
Q Consensus 144 p~~~i~le~~~~~p~~~~~~~id~~~pig~gqr~~i~~~~~~gkt~ll~~ia~~~~~~~~-~v-~~i~~ligEr~~ev~e 221 (423)
T Consensus 116 ~~~NP~aR~yP~efIqTgIsaIDg~NtLvrgQKlPIFSgSGlphN~LaaqIarQA~v~~~~e~favVfaamGit~eea~f 195 (463)
T COG1156 116 APINPYARIYPEEFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNELAAQIARQATVDGEEEEFAVVFAAMGITHEEALF 195 (463)
T ss_pred CCCCCHHHHCHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHH
T ss_conf 87891565472667652960876434653365466012799843799999997536678754305887404731899999
Q ss_pred HHHHH-------CCEEEECCCCCCHHHHHHHHHHHHHHHHHHH-HCCCCEEEEEECHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 99840-------3427823667888899999999999999999-779928999816389877620013667776777520
Q gi|254780810|r 222 MQRSV-------QGEVISSTFDESAARHVQVAEMVIAKAKCLV-EYGLDVVILLDSITRLCRAYNVLMPSSGKILTGGVD 293 (423)
Q Consensus 222 ~~~~~-------~~~vv~st~d~~~~~~~~~a~~a~~~a~~~~-e~G~dVll~~DslTR~ArA~~~~~~~~g~~~~gg~~ 293 (423)
T Consensus 196 F~~~fe~tGal~r~vlflnlA~dp~vEri~tPr~aLt~AEylA~e~~~hVLVilTDMTnyceALREIsaareeVPgrRGY 275 (463)
T COG1156 196 FMDEFEETGALDRAVLFLNLADDPAVERIITPRMALTVAEYLAFEKDMHVLVILTDMTNYCEALREISAAREEVPGRRGY 275 (463)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 99888762246666765423678743476131689999999852578669999701467899999987641437776788
Q ss_pred HHHHHH-CHHHHHCCCCCCC-CCCCEEEEEEEECCCCCCCCHHHHHHHHCCCCEEEEEHHHHHCCCCCCCCCCCCCCCCH
Q ss_conf 246650-4687522577777-78500121120126765541388988522660789808788479997405335422101
Q gi|254780810|r 294 ANALQR-PKRFFGAARNIKE-GGSLTIIGTALVDTGSRMDEVIFEEFKGTGNSEIVLERKIADKRIFPAMDIIKSGTRKE 371 (423)
Q Consensus 294 ~~~l~~-~~~~~~~ar~~~~-~Gs~T~~~t~lvetg~~~d~~i~~~~~~~~d~~i~L~r~la~~~~~PAId~~~S~sR~~ 371 (423)
T Consensus 276 PGymYTdLatiYErAg~i~g~~GSiTqipIlTMP-~DDITHPIPDlTGYITEGQivl~r~l~~~gIyPpi~vlpSLSRL~ 354 (463)
T COG1156 276 PGYMYTDLATIYERAGRIRGRKGSITQIPILTMP-GDDITHPIPDLTGYITEGQIVLSRDLHRKGIYPPINVLPSLSRLM 354 (463)
T ss_pred CCHHHHHHHHHHHHHCEECCCCCCEEEEEEEECC-CCCCCCCCCCCCCEECCCEEEEEHHCCCCCCCCCCCCCCCHHHHH
T ss_conf 6166778899987650330578726987765269-987678777655533165599971002488679723361277776
Q ss_pred HHCCC-----HHHHHHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf 55199-----999999999999961269378999999
Q gi|254780810|r 372 DLLVE-----RQDLQKVFMLRRIVSSMNSSDAIEFLI 403 (423)
Q Consensus 372 ~~l~~-----~~~~~~~~~~r~~l~~~~~~e~~~~l~ 403 (423)
T Consensus 355 ~~giG~g~TReDH~~~snql~a~YA~g~d~r~l~avv 391 (463)
T COG1156 355 KDGIGEGKTREDHGDVSNQLYAAYAEGRDLRELVAVV 391 (463)
T ss_pred HCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH
T ss_conf 5144788664410788999999985024089999875