HHsearch alignment for GI: 254780810 and conserved domain: COG3842
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].
Probab=95.34 E-value=0.0086 Score=37.48 Aligned_cols=135 Identities=23% Similarity=0.231 Sum_probs=72.4
Q ss_pred HHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEE-------------------------------------EE
Q ss_conf 88655102312220487787899999999998611886469-------------------------------------99
Q gi|254780810|r 167 LIAPIGKGQRSLIVAPPRTGKTILLQNIAHSIKKNHPECYL-------------------------------------IV 209 (423)
Q Consensus 167 ~~~pig~gqr~~i~~~~~~gkt~ll~~ia~~~~~~~~~v~~-------------------------------------i~ 209 (423)
T Consensus 24 isl~i~~Gef~tlLGPSGcGKTTlLR~IAG-fe~--p~~G~I~l~g~~i~~lpp~kR~ig~VFQ~YALFPHmtV~~NVaf 100 (352)
T COG3842 24 ISLDIKKGEFVTLLGPSGCGKTTLLRMIAG-FEQ--PSSGEILLDGEDITDVPPEKRPIGMVFQSYALFPHMTVEENVAF 100 (352)
T ss_pred CEEEECCCCEEEEECCCCCCHHHHHHHHHC-CCC--CCCCEEEECCEECCCCCHHHCCCCEEECCCCCCCCCCHHHHHHH
T ss_conf 144544886899989988888999999967-778--88865999999988899422652326067666888858997553
Q ss_pred EEC--C-----CCHHHHHHHHHHHCC---------------------------EEEECCCCCCHHH--HHHHHHHHHHHH
Q ss_conf 950--8-----787899999984034---------------------------2782366788889--999999999999
Q gi|254780810|r 210 LLI--D-----ERPEEVTDMQRSVQG---------------------------EVISSTFDESAAR--HVQVAEMVIAKA 253 (423)
Q Consensus 210 ~li--g-----Er~~ev~e~~~~~~~---------------------------~vv~st~d~~~~~--~~~~a~~a~~~a 253 (423)
T Consensus 101 GLk~~~~~~~~ei~~rV~e~L~lV~L~~~~~R~p~qLSGGQqQRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk 180 (352)
T COG3842 101 GLKVRKKLKKAEIKARVEEALELVGLEGFADRKPHQLSGGQQQRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELK 180 (352)
T ss_pred HHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHCHHHHCHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHH
T ss_conf 33105778778999999999987485444442766648278999999997421835443427400231899999999999
Q ss_pred HHHHHCCCCEEEE-EECHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCHHHH
Q ss_conf 9999779928999-81638987762001366777677752024665046875
Q gi|254780810|r 254 KCLVEYGLDVVIL-LDSITRLCRAYNVLMPSSGKILTGGVDANALQRPKRFF 304 (423)
Q Consensus 254 ~~~~e~G~dVll~-~DslTR~ArA~~~~~~~~g~~~~gg~~~~~l~~~~~~~ 304 (423)
T Consensus 181 ~lq~~~giT~i~VTHDqeEAl~msDri~Vm~~G~I~Q~gtP~eiY~~P~~~f 232 (352)
T COG3842 181 ELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYERPATRF 232 (352)
T ss_pred HHHHHCCCEEEEEECCHHHHHHHCCCEEECCCCCEEECCCHHHHHHCCCHHH
T ss_conf 9998559729999789899863236227821770432288789752802688