HHsearch alignment for GI: 254780810 and conserved domain: COG4988
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones].
Probab=93.58 E-value=0.027 Score=34.25 Aligned_cols=32 Identities=31% Similarity=0.381 Sum_probs=27.8
Q ss_pred HHHHHHHHCCCCEEEECCCCCCHHHHHHHHHH
Q ss_conf 99886551023122204877878999999999
Q gi|254780810|r 165 IDLIAPIGKGQRSLIVAPPRTGKTILLQNIAH 196 (423)
Q Consensus 165 id~~~pig~gqr~~i~~~~~~gkt~ll~~ia~ 196 (423)
T Consensus 338 ~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G 369 (559)
T COG4988 338 SDLNLTIKAGQLTALVGASGAGKSTLLNLLLG 369 (559)
T ss_pred CCCEEEECCCCEEEEECCCCCCHHHHHHHHHC
T ss_conf 67106754896799988999978999999847