HHsearch alignment for GI: 254780810 and conserved domain: COG5635
>COG5635 Predicted NTPase (NACHT family) [Signal transduction mechanisms].
Probab=96.14 E-value=0.0082 Score=37.63 Aligned_cols=54 Identities=28% Similarity=0.397 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCC--CCCEEEEEECC
Q ss_conf 3688899886551023122204877878999999999986118--86469999508
Q gi|254780810|r 160 ISSRVIDLIAPIGKGQRSLIVAPPRTGKTILLQNIAHSIKKNH--PECYLIVLLID 213 (423)
Q Consensus 160 ~~~~~id~~~pig~gqr~~i~~~~~~gkt~ll~~ia~~~~~~~--~~v~~i~~lig 213 (423)
T Consensus 208 ~~~~~~~~~~~~~~~~~~~Ilg~pGsGKTtfl~~lA~~~~~~~~~~~~vpi~~~l~ 263 (824)
T COG5635 208 DDQDALPGLEALEKYAKLLILGAPGSGKTTFLQRLALWLAQRTLEPEDVPIFLLLN 263 (824)
T ss_pred CHHHHHHHCCHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEC
T ss_conf 11234610035866523334468887626799999999741525665677344423