HHsearch alignment for GI: 254780810 and conserved domain: PRK04841

Probab=95.78  E-value=0.11  Score=30.24  Aligned_cols=101  Identities=15%  Similarity=0.142  Sum_probs=57.0

Q ss_pred             HHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCC-------EE-----
Q ss_conf             889988655102312220487787899999999998611886469999508787899999984034-------27-----
Q gi|254780810|r  163 RVIDLIAPIGKGQRSLIVAPPRTGKTILLQNIAHSIKKNHPECYLIVLLIDERPEEVTDMQRSVQG-------EV-----  230 (423)
Q Consensus       163 ~~id~~~pig~gqr~~i~~~~~~gkt~ll~~ia~~~~~~~~~v~~i~~ligEr~~ev~e~~~~~~~-------~v-----  230 (423)
T Consensus        21 rL~~~L~~~~~~~l~lv~APaG~GKTtl~a~w~~---~~-~-~~~W-lsld~~d~~~~~f~~~l~~al~~~~~~~~~~~~   94 (903)
T PRK04841         21 RLLAKLSGANNYRLVLVRSPAGYGKTTLASQWAA---GK-N-NVGW-YSLDESDNQPERFASYLIAALQQATNGHCSKSE   94 (903)
T ss_pred             HHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHH---CC-C-CEEE-EECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHH
T ss_conf             7999998515899799977999889999999983---49-9-8599-858854489999999999999985654331123


Q ss_pred             -EECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHH
Q ss_conf             -82366788889999999999999999977992899981638987
Q gi|254780810|r  231 -ISSTFDESAARHVQVAEMVIAKAKCLVEYGLDVVILLDSITRLC  274 (423)
Q Consensus       231 -v~st~d~~~~~~~~~a~~a~~~a~~~~e~G~dVll~~DslTR~A  274 (423)
T Consensus        95 ~~~~~~~~-~~~~~~~~~l----~~~l~~~~~~~~lvlDD~h~i~  134 (903)
T PRK04841         95 ALAEKRQY-ASLTSLFAQL----FIELSDWHQPLYLVLDDYHLIT  134 (903)
T ss_pred             HCCCCCCC-CCHHHHHHHH----HHHHHCCCCCEEEEEECCCCCC
T ss_conf             11355665-5499999999----9997558998699986836488